Query 019298
Match_columns 343
No_of_seqs 167 out of 1928
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 08:19:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019298.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019298hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 5.4E-54 1.2E-58 393.0 34.8 296 35-343 28-331 (393)
2 KOG0259 Tyrosine aminotransfer 100.0 4E-52 8.7E-57 356.5 33.3 328 14-343 41-371 (447)
3 PLN02656 tyrosine transaminase 100.0 8.8E-51 1.9E-55 377.4 35.6 327 16-343 12-341 (409)
4 PLN00145 tyrosine/nicotianamin 100.0 1.2E-50 2.7E-55 377.6 36.0 326 17-343 34-362 (430)
5 PLN02187 rooty/superroot1 100.0 4.6E-50 9.9E-55 376.2 34.3 324 15-343 47-376 (462)
6 KOG0257 Kynurenine aminotransf 100.0 2.6E-50 5.7E-55 351.2 29.6 290 40-343 36-343 (420)
7 PLN00143 tyrosine/nicotianamin 100.0 9.3E-50 2E-54 370.4 34.7 311 32-343 29-342 (409)
8 PLN02368 alanine transaminase 100.0 5.5E-50 1.2E-54 368.9 30.3 331 2-343 10-395 (407)
9 PRK07366 succinyldiaminopimela 100.0 2E-49 4.3E-54 366.7 33.4 323 1-343 1-329 (388)
10 PRK13355 bifunctional HTH-doma 100.0 2.6E-49 5.7E-54 377.2 34.0 332 1-343 117-451 (517)
11 PRK07681 aspartate aminotransf 100.0 7.9E-49 1.7E-53 363.7 33.7 323 1-343 3-329 (399)
12 PRK06207 aspartate aminotransf 100.0 9.2E-49 2E-53 363.2 33.9 328 3-343 8-342 (405)
13 PRK08068 transaminase; Reviewe 100.0 2.2E-48 4.8E-53 359.7 34.0 323 2-343 4-330 (389)
14 PLN00175 aminotransferase fami 100.0 3.9E-48 8.4E-53 359.5 34.0 315 2-343 31-349 (413)
15 PTZ00433 tyrosine aminotransfe 100.0 5.7E-48 1.2E-52 359.1 35.0 321 16-343 18-346 (412)
16 PRK09276 LL-diaminopimelate am 100.0 6E-48 1.3E-52 356.5 34.1 324 1-343 2-329 (385)
17 TIGR03540 DapC_direct LL-diami 100.0 1.3E-47 2.8E-52 354.1 34.5 323 2-343 1-327 (383)
18 TIGR01264 tyr_amTase_E tyrosin 100.0 9.9E-48 2.2E-52 356.7 33.8 321 16-343 15-337 (401)
19 PRK09148 aminotransferase; Val 100.0 1.2E-47 2.6E-52 356.0 34.0 324 1-343 1-328 (405)
20 PRK06855 aminotransferase; Val 100.0 1.1E-47 2.4E-52 358.6 34.0 304 34-343 31-343 (433)
21 PRK06348 aspartate aminotransf 100.0 1.9E-47 4.1E-52 352.8 33.5 294 35-343 29-325 (384)
22 TIGR01265 tyr_nico_aTase tyros 100.0 5.9E-47 1.3E-51 351.5 35.6 323 16-343 15-339 (403)
23 PRK05942 aspartate aminotransf 100.0 6.3E-47 1.4E-51 350.4 34.1 296 34-343 34-333 (394)
24 PRK06290 aspartate aminotransf 100.0 9.4E-47 2E-51 349.5 34.2 293 34-343 43-340 (410)
25 PRK08636 aspartate aminotransf 100.0 7.2E-47 1.6E-51 350.9 33.4 321 4-343 7-338 (403)
26 PRK09147 succinyldiaminopimela 100.0 7.6E-47 1.6E-51 350.3 32.7 318 4-343 2-333 (396)
27 PRK06107 aspartate aminotransf 100.0 9E-47 1.9E-51 350.2 33.2 324 1-343 4-332 (402)
28 PTZ00377 alanine aminotransfer 100.0 8.7E-47 1.9E-51 357.1 32.5 335 2-342 9-402 (481)
29 PRK08960 hypothetical protein; 100.0 2.2E-46 4.7E-51 346.1 34.0 318 3-343 5-326 (387)
30 PRK09265 aminotransferase AlaT 100.0 6.3E-46 1.4E-50 344.8 33.7 305 33-343 31-338 (404)
31 PRK12414 putative aminotransfe 100.0 7.9E-46 1.7E-50 341.8 33.7 294 34-343 28-324 (384)
32 PRK07568 aspartate aminotransf 100.0 1.6E-45 3.4E-50 341.9 35.4 323 1-343 1-326 (397)
33 PLN02450 1-aminocyclopropane-1 100.0 4.3E-46 9.3E-51 349.9 30.2 302 27-343 30-364 (468)
34 PRK07337 aminotransferase; Val 100.0 1.5E-45 3.3E-50 340.8 33.0 320 1-343 1-324 (388)
35 PRK08363 alanine aminotransfer 100.0 1.4E-45 2.9E-50 342.1 32.7 326 2-343 3-333 (398)
36 PRK09257 aromatic amino acid a 100.0 3E-46 6.6E-51 346.1 28.0 328 5-343 3-353 (396)
37 PLN02607 1-aminocyclopropane-1 100.0 7.5E-46 1.6E-50 345.7 29.8 327 2-343 12-371 (447)
38 PRK05957 aspartate aminotransf 100.0 3.5E-45 7.7E-50 338.1 34.0 319 1-343 2-325 (389)
39 PRK07550 hypothetical protein; 100.0 5.2E-45 1.1E-49 337.0 35.0 322 3-343 2-326 (386)
40 PRK08361 aspartate aminotransf 100.0 1.8E-45 3.8E-50 340.5 31.2 295 34-343 32-330 (391)
41 PRK05764 aspartate aminotransf 100.0 4.1E-45 8.8E-50 338.8 33.5 324 1-343 2-329 (393)
42 TIGR03538 DapC_gpp succinyldia 100.0 3.1E-45 6.8E-50 339.1 32.5 308 16-343 11-332 (393)
43 COG1168 MalY Bifunctional PLP- 100.0 3.5E-45 7.5E-50 316.1 30.1 295 34-343 24-326 (388)
44 PRK06108 aspartate aminotransf 100.0 6.2E-45 1.3E-49 336.4 33.7 296 34-343 23-323 (382)
45 PRK07682 hypothetical protein; 100.0 1.9E-45 4.2E-50 339.0 30.2 293 35-343 20-316 (378)
46 PLN02231 alanine transaminase 100.0 1E-44 2.2E-49 343.6 33.2 297 34-342 128-454 (534)
47 PRK08912 hypothetical protein; 100.0 8.9E-45 1.9E-49 335.5 32.1 293 35-343 26-322 (387)
48 PRK07683 aminotransferase A; V 100.0 1.7E-44 3.8E-49 333.2 33.6 314 4-343 6-323 (387)
49 PRK07590 L,L-diaminopimelate a 100.0 2.1E-44 4.6E-49 335.0 33.1 289 34-343 33-352 (409)
50 PTZ00376 aspartate aminotransf 100.0 6E-45 1.3E-49 338.0 29.2 326 5-343 6-358 (404)
51 TIGR03537 DapC succinyldiamino 100.0 1.6E-44 3.6E-49 329.3 31.4 288 37-343 2-295 (350)
52 PRK09082 methionine aminotrans 100.0 1.5E-44 3.3E-49 333.6 30.9 294 34-343 29-326 (386)
53 PRK08175 aminotransferase; Val 100.0 3.4E-44 7.5E-49 332.3 32.3 293 34-343 28-327 (395)
54 PLN02376 1-aminocyclopropane-1 100.0 1.8E-44 3.9E-49 340.0 30.6 300 28-343 39-371 (496)
55 PRK07777 aminotransferase; Val 100.0 7.4E-44 1.6E-48 329.4 33.5 294 35-343 24-322 (387)
56 PRK07309 aromatic amino acid a 100.0 8.7E-44 1.9E-48 329.0 33.4 292 35-343 30-327 (391)
57 PRK07324 transaminase; Validat 100.0 3E-44 6.5E-49 329.7 29.8 289 32-343 23-313 (373)
58 PRK07865 N-succinyldiaminopime 100.0 2E-43 4.3E-48 323.9 31.3 306 1-343 1-312 (364)
59 PRK05839 hypothetical protein; 100.0 3.2E-43 6.9E-48 323.2 32.2 284 34-343 23-316 (374)
60 PRK02610 histidinol-phosphate 100.0 1.7E-43 3.7E-48 325.2 29.1 285 36-343 29-321 (374)
61 COG1167 ARO8 Transcriptional r 100.0 2.9E-43 6.3E-48 329.1 30.1 295 34-343 88-393 (459)
62 PLN02397 aspartate transaminas 100.0 4.6E-43 1E-47 326.3 29.9 321 7-343 27-376 (423)
63 PRK01533 histidinol-phosphate 100.0 2.2E-43 4.7E-48 322.7 25.8 280 34-343 28-308 (366)
64 TIGR03542 DAPAT_plant LL-diami 100.0 4.4E-42 9.5E-47 318.8 32.3 287 34-343 32-345 (402)
65 PRK06358 threonine-phosphate d 100.0 2E-42 4.3E-47 315.6 29.4 282 35-343 19-301 (354)
66 PRK15481 transcriptional regul 100.0 1.6E-42 3.5E-47 324.5 28.0 284 34-343 84-373 (431)
67 PRK06836 aspartate aminotransf 100.0 1.2E-41 2.7E-46 314.9 33.1 324 4-343 3-336 (394)
68 PF00155 Aminotran_1_2: Aminot 100.0 9.8E-43 2.1E-47 319.6 23.6 297 36-343 2-312 (363)
69 PRK09440 avtA valine--pyruvate 100.0 5.2E-42 1.1E-46 320.0 28.4 321 1-343 1-345 (416)
70 COG0079 HisC Histidinol-phosph 100.0 6.7E-42 1.5E-46 308.0 28.0 278 35-343 22-299 (356)
71 PRK03317 histidinol-phosphate 100.0 3.9E-42 8.5E-47 315.8 26.7 285 36-342 27-314 (368)
72 TIGR03539 DapC_actino succinyl 100.0 2.2E-41 4.7E-46 309.5 31.4 296 16-343 5-306 (357)
73 PRK14809 histidinol-phosphate 100.0 2.7E-41 5.8E-46 309.1 28.1 276 34-343 29-305 (357)
74 PRK09275 aspartate aminotransf 100.0 1.5E-41 3.4E-46 317.7 26.5 317 13-343 75-442 (527)
75 PRK08056 threonine-phosphate d 100.0 4.4E-41 9.6E-46 307.3 28.3 281 34-343 19-300 (356)
76 PRK05166 histidinol-phosphate 100.0 2.7E-41 5.8E-46 310.4 27.0 282 34-343 35-318 (371)
77 PRK03158 histidinol-phosphate 100.0 1.6E-41 3.4E-46 311.0 25.2 280 34-343 28-308 (359)
78 PRK07392 threonine-phosphate d 100.0 1.7E-40 3.6E-45 304.1 28.8 279 34-343 21-303 (360)
79 PRK06225 aspartate aminotransf 100.0 4.5E-40 9.7E-45 303.5 31.5 287 34-343 27-316 (380)
80 PLN03026 histidinol-phosphate 100.0 1.2E-40 2.7E-45 306.4 27.1 275 34-343 51-327 (380)
81 PLN02672 methionine S-methyltr 100.0 2.3E-40 5E-45 327.2 30.3 291 34-342 696-1005(1082)
82 PRK04870 histidinol-phosphate 100.0 2.5E-40 5.4E-45 302.6 26.0 278 34-343 25-304 (356)
83 PRK08637 hypothetical protein; 100.0 1.1E-39 2.4E-44 301.3 30.5 302 35-343 3-333 (388)
84 PRK09105 putative aminotransfe 100.0 5.9E-40 1.3E-44 300.7 27.1 274 35-342 43-317 (370)
85 TIGR03801 asp_4_decarbox aspar 100.0 6.3E-40 1.4E-44 306.5 26.8 295 35-343 94-441 (521)
86 PRK14807 histidinol-phosphate 100.0 2.2E-39 4.8E-44 295.5 29.2 277 35-343 22-299 (351)
87 PRK08153 histidinol-phosphate 100.0 1.5E-39 3.2E-44 298.4 27.9 275 36-343 33-309 (369)
88 PRK03321 putative aminotransfe 100.0 7.1E-40 1.5E-44 299.3 24.2 281 35-343 22-302 (352)
89 PRK05387 histidinol-phosphate 100.0 1.4E-39 3E-44 297.5 26.1 275 34-343 23-299 (353)
90 PRK04781 histidinol-phosphate 100.0 4.7E-39 1E-43 294.4 26.9 274 36-343 32-310 (364)
91 PRK02731 histidinol-phosphate 100.0 5.5E-39 1.2E-43 295.1 27.1 280 34-343 31-311 (367)
92 PRK14808 histidinol-phosphate 100.0 6.4E-39 1.4E-43 290.1 26.9 272 33-343 17-288 (335)
93 PRK03967 histidinol-phosphate 100.0 9.7E-39 2.1E-43 289.5 26.9 271 34-343 17-287 (337)
94 PRK01688 histidinol-phosphate 100.0 2.2E-39 4.7E-44 295.3 22.7 272 36-343 29-303 (351)
95 KOG0256 1-aminocyclopropane-1- 100.0 7.5E-39 1.6E-43 277.3 23.5 264 69-343 113-395 (471)
96 TIGR01141 hisC histidinol-phos 100.0 3.9E-38 8.4E-43 287.2 26.0 280 34-343 18-297 (346)
97 PRK07908 hypothetical protein; 100.0 3.1E-37 6.7E-42 281.4 29.1 271 34-343 21-293 (349)
98 PRK06425 histidinol-phosphate 100.0 2.3E-37 5.1E-42 280.0 25.8 262 36-343 17-279 (332)
99 PRK04635 histidinol-phosphate 100.0 1.8E-37 4E-42 283.2 23.0 270 35-343 31-303 (354)
100 PRK05664 threonine-phosphate d 100.0 1.9E-36 4E-41 273.7 27.2 255 35-343 20-278 (330)
101 PRK06959 putative threonine-ph 100.0 1.7E-36 3.6E-41 274.6 25.9 258 35-343 24-283 (339)
102 PRK00950 histidinol-phosphate 100.0 2.9E-36 6.4E-41 276.4 26.4 272 34-343 33-306 (361)
103 PRK08354 putative aminotransfe 100.0 3.7E-35 8.1E-40 263.2 27.3 239 34-321 7-246 (311)
104 TIGR01140 L_thr_O3P_dcar L-thr 100.0 2.4E-35 5.2E-40 266.6 24.3 264 34-343 16-281 (330)
105 COG1448 TyrB Aspartate/tyrosin 100.0 4.9E-35 1.1E-39 253.3 22.6 325 5-343 3-353 (396)
106 COG3977 Alanine-alpha-ketoisov 100.0 2.6E-33 5.6E-38 233.8 23.2 313 1-343 1-345 (417)
107 KOG0634 Aromatic amino acid am 100.0 3.4E-32 7.4E-37 237.9 23.7 261 70-343 93-393 (472)
108 cd00609 AAT_like Aspartate ami 100.0 5.7E-31 1.2E-35 240.1 31.8 294 38-343 1-296 (350)
109 KOG0258 Alanine aminotransfera 100.0 3.5E-32 7.6E-37 234.4 20.2 269 68-342 104-399 (475)
110 PRK13238 tnaA tryptophanase/L- 100.0 2.8E-31 6.1E-36 247.8 26.8 281 34-343 35-352 (460)
111 cd00617 Tnase_like Tryptophana 100.0 2E-29 4.3E-34 232.3 24.0 286 32-343 8-327 (431)
112 KOG0633 Histidinol phosphate a 100.0 1E-28 2.2E-33 202.6 16.4 240 80-342 72-317 (375)
113 PLN02822 serine palmitoyltrans 100.0 1E-27 2.3E-32 225.7 23.2 285 33-343 107-405 (481)
114 TIGR00858 bioF 8-amino-7-oxono 100.0 1.5E-26 3.4E-31 211.9 26.5 275 33-342 14-303 (360)
115 KOG1411 Aspartate aminotransfe 100.0 1.1E-27 2.4E-32 203.7 16.3 327 6-343 30-380 (427)
116 TIGR01822 2am3keto_CoA 2-amino 100.0 3.1E-26 6.7E-31 212.5 27.4 270 33-336 36-322 (393)
117 PRK06939 2-amino-3-ketobutyrat 100.0 3.7E-26 8.1E-31 212.2 26.5 278 33-339 40-329 (397)
118 TIGR03576 pyridox_MJ0158 pyrid 100.0 5.9E-26 1.3E-30 205.4 25.9 255 48-343 29-287 (346)
119 PRK07049 methionine gamma-lyas 99.9 5.9E-26 1.3E-30 210.8 24.7 229 70-333 77-320 (427)
120 PRK10534 L-threonine aldolase; 99.9 1.5E-26 3.3E-31 209.8 20.3 268 38-343 2-282 (333)
121 KOG1412 Aspartate aminotransfe 99.9 4.3E-26 9.3E-31 191.5 19.9 331 2-343 4-360 (410)
122 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 3.7E-25 8E-30 202.8 28.1 263 51-341 11-298 (361)
123 TIGR01825 gly_Cac_T_rel pyrido 99.9 2.4E-25 5.3E-30 205.9 26.7 273 34-337 32-315 (385)
124 cd06502 TA_like Low-specificit 99.9 7.9E-26 1.7E-30 205.5 22.9 262 49-340 6-280 (338)
125 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 6.2E-25 1.3E-29 201.7 27.0 261 53-342 20-305 (370)
126 PLN02721 threonine aldolase 99.9 5E-25 1.1E-29 201.5 24.0 277 35-343 5-296 (353)
127 PRK13392 5-aminolevulinate syn 99.9 8.9E-25 1.9E-29 203.6 25.3 271 34-338 45-331 (410)
128 PRK05958 8-amino-7-oxononanoat 99.9 2.3E-24 4.9E-29 199.5 27.9 279 33-342 37-325 (385)
129 cd00378 SHMT Serine-glycine hy 99.9 3E-24 6.6E-29 199.7 27.9 280 34-343 18-316 (402)
130 PRK02627 acetylornithine amino 99.9 3.3E-24 7.1E-29 199.1 25.9 286 33-343 37-342 (396)
131 PRK10874 cysteine sulfinate de 99.9 9.3E-24 2E-28 196.3 28.1 272 35-340 18-330 (401)
132 TIGR03392 FeS_syn_CsdA cystein 99.9 7.9E-24 1.7E-28 196.6 27.2 272 35-340 15-327 (398)
133 PRK08247 cystathionine gamma-s 99.9 5.4E-24 1.2E-28 194.7 25.6 232 70-340 46-285 (366)
134 TIGR00707 argD acetylornithine 99.9 3.3E-24 7.2E-29 198.0 23.7 282 34-342 26-328 (379)
135 PRK07179 hypothetical protein; 99.9 8.4E-24 1.8E-28 196.8 26.6 273 34-341 53-335 (407)
136 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.8E-23 4E-28 193.1 27.3 266 34-331 17-305 (387)
137 PLN02242 methionine gamma-lyas 99.9 2.6E-24 5.6E-29 199.1 21.5 219 77-333 76-304 (418)
138 cd06454 KBL_like KBL_like; thi 99.9 1.3E-23 2.7E-28 191.9 25.4 271 36-340 2-287 (349)
139 PLN02483 serine palmitoyltrans 99.9 1.3E-23 2.9E-28 198.3 25.4 274 33-341 98-403 (489)
140 TIGR01979 sufS cysteine desulf 99.9 1.4E-22 3E-27 188.6 29.5 267 34-334 16-323 (403)
141 PRK06234 methionine gamma-lyas 99.9 1.9E-23 4.1E-28 193.1 23.1 221 75-333 62-293 (400)
142 PRK03244 argD acetylornithine 99.9 1.6E-23 3.5E-28 194.5 22.5 287 33-343 41-341 (398)
143 PRK07504 O-succinylhomoserine 99.9 7.5E-23 1.6E-27 188.8 25.9 226 70-333 59-291 (398)
144 PRK01278 argD acetylornithine 99.9 7.9E-23 1.7E-27 189.2 25.4 245 33-299 29-289 (389)
145 PRK09295 bifunctional cysteine 99.9 2.1E-22 4.5E-27 187.5 28.1 266 35-333 22-328 (406)
146 TIGR01821 5aminolev_synth 5-am 99.9 1.5E-22 3.3E-27 188.1 26.6 269 35-337 45-329 (402)
147 TIGR02080 O_succ_thio_ly O-suc 99.9 8.6E-23 1.9E-27 187.3 24.1 226 70-333 45-277 (382)
148 PRK08133 O-succinylhomoserine 99.9 1.3E-22 2.8E-27 186.8 25.3 219 78-333 62-286 (390)
149 PRK08249 cystathionine gamma-s 99.9 1.6E-22 3.5E-27 186.3 25.5 220 77-333 64-289 (398)
150 cd00613 GDC-P Glycine cleavage 99.9 2.2E-22 4.7E-27 187.1 26.3 264 34-328 19-330 (398)
151 PRK08776 cystathionine gamma-s 99.9 1.4E-22 3.1E-27 186.9 24.3 225 70-333 54-286 (405)
152 PRK08045 cystathionine gamma-s 99.9 1.8E-22 3.9E-27 185.2 24.7 226 70-333 46-278 (386)
153 TIGR01976 am_tr_V_VC1184 cyste 99.9 3E-22 6.5E-27 186.0 26.1 263 37-333 18-321 (397)
154 PRK09064 5-aminolevulinate syn 99.9 2.5E-22 5.4E-27 187.0 25.6 273 34-341 45-333 (407)
155 PRK07811 cystathionine gamma-s 99.9 2.2E-22 4.7E-27 185.3 24.1 220 77-333 61-287 (388)
156 PRK06460 hypothetical protein; 99.9 1.7E-22 3.7E-27 185.2 23.2 218 77-333 45-270 (376)
157 PRK02948 cysteine desulfurase; 99.9 2.5E-22 5.5E-27 185.5 24.0 262 38-330 2-280 (381)
158 PRK07503 methionine gamma-lyas 99.9 2.4E-22 5.2E-27 185.7 23.8 225 70-333 59-292 (403)
159 TIGR01328 met_gam_lyase methio 99.9 2.4E-22 5.1E-27 185.1 23.1 226 70-333 53-286 (391)
160 PRK07810 O-succinylhomoserine 99.9 2.5E-22 5.3E-27 185.4 23.0 226 70-333 64-296 (403)
161 TIGR01325 O_suc_HS_sulf O-succ 99.9 3.7E-22 7.9E-27 183.5 24.0 225 70-333 48-279 (380)
162 PLN02855 Bifunctional selenocy 99.9 6.3E-22 1.4E-26 185.2 25.6 266 35-333 31-336 (424)
163 PRK06767 methionine gamma-lyas 99.9 6.7E-22 1.4E-26 182.1 25.2 225 70-333 55-287 (386)
164 PRK07050 cystathionine beta-ly 99.9 7.1E-22 1.5E-26 182.0 24.3 226 70-333 59-291 (394)
165 cd00614 CGS_like CGS_like: Cys 99.9 7.7E-22 1.7E-26 180.9 23.9 220 77-333 40-266 (369)
166 PRK08861 cystathionine gamma-s 99.9 6.6E-22 1.4E-26 181.1 22.9 226 70-333 47-279 (388)
167 PRK13393 5-aminolevulinate syn 99.9 2.7E-21 5.9E-26 179.9 26.9 270 34-337 44-329 (406)
168 cd00610 OAT_like Acetyl ornith 99.9 8.9E-22 1.9E-26 183.8 23.3 289 33-342 34-352 (413)
169 PRK08574 cystathionine gamma-s 99.9 1.7E-21 3.7E-26 178.9 24.6 219 77-333 53-278 (385)
170 cd06453 SufS_like Cysteine des 99.9 1.9E-21 4.1E-26 179.2 24.9 253 51-332 9-301 (373)
171 TIGR03403 nifS_epsilon cystein 99.9 2.6E-21 5.6E-26 178.8 25.8 262 51-334 9-287 (382)
172 PRK05093 argD bifunctional N-s 99.9 2.9E-21 6.4E-26 179.4 24.8 279 34-343 39-344 (403)
173 PF12897 Aminotran_MocR: Alani 99.9 1.8E-21 3.9E-26 169.7 21.6 255 69-342 60-352 (425)
174 TIGR01437 selA_rel uncharacter 99.9 1.8E-21 3.9E-26 177.8 22.6 257 35-331 8-288 (363)
175 cd06451 AGAT_like Alanine-glyo 99.9 2.6E-21 5.5E-26 177.2 23.7 250 51-332 8-284 (356)
176 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 2.9E-21 6.3E-26 179.5 24.0 165 70-261 51-219 (418)
177 PRK09028 cystathionine beta-ly 99.9 4.5E-21 9.8E-26 175.4 24.8 243 51-333 35-286 (394)
178 PRK02936 argD acetylornithine 99.9 6.3E-21 1.4E-25 175.9 25.5 287 33-343 27-327 (377)
179 TIGR01977 am_tr_V_EF2568 cyste 99.9 8E-21 1.7E-25 175.2 24.9 262 51-333 10-297 (376)
180 PRK07582 cystathionine gamma-l 99.9 3E-21 6.5E-26 176.5 21.7 219 70-331 45-271 (366)
181 PRK07269 cystathionine gamma-s 99.9 6.2E-21 1.3E-25 173.8 23.3 235 70-341 48-286 (364)
182 TIGR00713 hemL glutamate-1-sem 99.9 3.9E-21 8.4E-26 179.8 22.4 270 33-329 46-343 (423)
183 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.4E-20 3E-25 172.2 25.5 259 51-342 8-297 (355)
184 PRK00011 glyA serine hydroxyme 99.9 2.1E-20 4.6E-25 174.6 27.2 276 34-343 24-320 (416)
185 PRK04073 rocD ornithine--oxo-a 99.9 1.1E-20 2.5E-25 175.1 24.8 284 34-342 39-344 (396)
186 TIGR02006 IscS cysteine desulf 99.9 1.7E-20 3.6E-25 174.3 25.1 268 37-331 4-288 (402)
187 cd06450 DOPA_deC_like DOPA dec 99.9 2.7E-21 5.9E-26 176.3 19.4 250 55-340 13-283 (345)
188 PRK14012 cysteine desulfurase; 99.9 3.3E-20 7.2E-25 172.5 26.0 267 38-330 5-289 (404)
189 COG0156 BioF 7-keto-8-aminopel 99.9 2.4E-20 5.3E-25 168.0 24.0 263 34-330 38-317 (388)
190 TIGR01324 cysta_beta_ly_B cyst 99.9 3.8E-20 8.2E-25 169.3 25.6 223 72-333 43-275 (377)
191 PRK00451 glycine dehydrogenase 99.9 1.9E-20 4.2E-25 176.4 24.3 270 36-340 69-384 (447)
192 TIGR03402 FeS_nifS cysteine de 99.9 4.8E-20 1E-24 170.2 26.1 257 51-333 9-283 (379)
193 PLN03227 serine palmitoyltrans 99.9 1.5E-20 3.2E-25 173.5 22.5 255 39-324 2-280 (392)
194 PRK08248 O-acetylhomoserine am 99.9 2.4E-20 5.2E-25 173.2 23.4 226 78-333 65-322 (431)
195 PRK05939 hypothetical protein; 99.9 3.8E-20 8.2E-25 170.4 24.4 231 72-333 40-293 (397)
196 PLN02409 serine--glyoxylate am 99.9 4.5E-20 9.8E-25 171.1 24.5 255 51-333 18-299 (401)
197 PRK05968 hypothetical protein; 99.9 1.1E-19 2.4E-24 167.4 26.4 217 78-333 64-288 (389)
198 PRK06702 O-acetylhomoserine am 99.9 1.5E-20 3.3E-25 173.4 20.1 227 78-333 62-319 (432)
199 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.1E-19 2.4E-24 167.2 25.3 191 55-278 14-206 (379)
200 PRK07671 cystathionine beta-ly 99.9 5.2E-20 1.1E-24 168.8 22.8 225 70-333 44-275 (377)
201 COG0520 csdA Selenocysteine ly 99.9 2.4E-19 5.2E-24 164.5 27.1 268 34-334 20-328 (405)
202 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.4E-19 3.1E-24 165.8 25.3 194 54-279 10-207 (376)
203 PRK13520 L-tyrosine decarboxyl 99.9 2.4E-19 5.2E-24 165.1 27.0 266 51-337 30-314 (371)
204 cd00615 Orn_deC_like Ornithine 99.9 2E-20 4.4E-25 166.4 19.0 167 77-259 59-232 (294)
205 TIGR03235 DNA_S_dndA cysteine 99.9 8E-20 1.7E-24 167.1 23.0 254 51-332 8-286 (353)
206 PRK06084 O-acetylhomoserine am 99.9 1.7E-19 3.6E-24 167.5 25.3 224 78-333 59-317 (425)
207 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 2.6E-19 5.6E-24 164.7 25.7 192 55-279 11-206 (375)
208 PLN02651 cysteine desulfurase 99.9 3.1E-19 6.8E-24 163.8 26.1 262 51-333 9-287 (364)
209 TIGR01329 cysta_beta_ly_E cyst 99.9 1.4E-19 3.1E-24 166.0 22.9 220 72-329 40-267 (378)
210 PLN02509 cystathionine beta-ly 99.9 3E-19 6.5E-24 166.3 25.2 227 71-333 125-358 (464)
211 PRK12381 bifunctional succinyl 99.9 2.5E-19 5.3E-24 166.5 24.7 284 33-342 37-342 (406)
212 TIGR03812 tyr_de_CO2_Arch tyro 99.9 3.5E-19 7.7E-24 164.1 25.5 266 53-341 32-322 (373)
213 PRK13479 2-aminoethylphosphona 99.9 1.6E-19 3.4E-24 166.1 23.0 250 51-331 14-289 (368)
214 PRK00854 rocD ornithine--oxo-a 99.9 2.6E-19 5.6E-24 166.5 24.3 277 33-340 39-344 (401)
215 PRK08064 cystathionine beta-ly 99.9 2.6E-19 5.6E-24 165.0 23.6 218 78-333 55-279 (390)
216 PRK08088 4-aminobutyrate amino 99.8 3.4E-19 7.5E-24 166.4 24.4 288 34-343 40-359 (425)
217 TIGR02326 transamin_PhnW 2-ami 99.8 3.8E-19 8.2E-24 163.3 23.7 222 80-331 38-288 (363)
218 PRK05967 cystathionine beta-ly 99.8 5.2E-19 1.1E-23 161.6 24.2 202 102-333 81-289 (395)
219 PRK04260 acetylornithine amino 99.8 1.4E-18 3E-23 160.1 27.1 284 34-343 28-325 (375)
220 PRK06176 cystathionine gamma-s 99.8 4.7E-19 1E-23 162.5 23.1 225 70-333 44-275 (380)
221 PTZ00125 ornithine aminotransf 99.8 1.4E-18 3E-23 161.6 24.2 286 33-342 29-338 (400)
222 PRK05994 O-acetylhomoserine am 99.8 2.4E-18 5.1E-23 160.2 24.7 226 78-333 64-321 (427)
223 PLN02955 8-amino-7-oxononanoat 99.8 5.6E-18 1.2E-22 156.2 26.3 256 34-321 101-386 (476)
224 COG1104 NifS Cysteine sulfinat 99.8 2.4E-18 5.2E-23 152.7 22.9 257 51-330 11-285 (386)
225 TIGR03246 arg_catab_astC succi 99.8 5.2E-18 1.1E-22 157.2 25.7 268 33-325 33-318 (397)
226 TIGR03588 PseC UDP-4-keto-6-de 99.8 6.4E-18 1.4E-22 156.0 26.1 241 54-330 9-283 (380)
227 cd00616 AHBA_syn 3-amino-5-hyd 99.8 9E-18 1.9E-22 153.5 26.5 238 59-333 3-259 (352)
228 PRK08134 O-acetylhomoserine am 99.8 7E-18 1.5E-22 156.7 25.0 226 78-333 65-322 (433)
229 PRK07505 hypothetical protein; 99.8 1.1E-17 2.4E-22 155.5 25.1 253 34-319 45-319 (402)
230 PRK07812 O-acetylhomoserine am 99.8 7.5E-18 1.6E-22 156.4 23.3 227 78-333 70-326 (436)
231 PLN00144 acetylornithine trans 99.8 8.9E-18 1.9E-22 154.5 22.5 282 33-343 13-327 (382)
232 COG0399 WecE Predicted pyridox 99.8 3.1E-17 6.7E-22 146.9 24.8 193 53-279 13-209 (374)
233 cd01494 AAT_I Aspartate aminot 99.8 4.2E-18 9.1E-23 138.8 17.7 165 80-259 3-169 (170)
234 TIGR02618 tyr_phenol_ly tyrosi 99.8 2.5E-17 5.3E-22 150.1 24.2 262 55-343 50-345 (450)
235 PF01041 DegT_DnrJ_EryC1: DegT 99.8 2.5E-17 5.5E-22 150.8 24.6 238 55-329 5-264 (363)
236 PRK15407 lipopolysaccharide bi 99.8 2.4E-16 5.3E-21 147.0 30.4 207 38-278 26-245 (438)
237 COG2008 GLY1 Threonine aldolas 99.8 1.1E-17 2.4E-22 145.4 18.6 267 51-343 10-289 (342)
238 PRK09792 4-aminobutyrate trans 99.8 4.9E-17 1.1E-21 151.4 23.9 287 33-343 38-358 (421)
239 PRK04366 glycine dehydrogenase 99.8 9.6E-17 2.1E-21 151.8 25.9 205 40-261 73-291 (481)
240 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 6.7E-17 1.5E-21 147.3 23.9 220 79-333 57-283 (386)
241 PRK00062 glutamate-1-semialdeh 99.8 2.5E-17 5.3E-22 153.8 21.6 243 33-299 48-313 (426)
242 PRK08114 cystathionine beta-ly 99.8 4E-17 8.7E-22 149.1 22.1 218 78-333 63-289 (395)
243 PF00266 Aminotran_5: Aminotra 99.8 2.2E-16 4.7E-21 145.4 27.3 253 51-332 9-301 (371)
244 TIGR03531 selenium_SpcS O-phos 99.8 6.8E-17 1.5E-21 149.0 23.3 211 101-325 124-344 (444)
245 PRK05937 8-amino-7-oxononanoat 99.8 1.2E-16 2.7E-21 146.8 24.3 258 34-324 3-283 (370)
246 PRK05613 O-acetylhomoserine am 99.8 7.9E-17 1.7E-21 149.6 23.1 226 79-333 71-331 (437)
247 KOG1549 Cysteine desulfurase N 99.8 6.2E-17 1.3E-21 144.3 20.9 203 34-261 41-257 (428)
248 PRK04612 argD acetylornithine 99.8 1.5E-16 3.3E-21 147.3 24.2 269 33-324 38-325 (408)
249 PRK06777 4-aminobutyrate amino 99.8 1.4E-16 3E-21 148.4 23.7 288 33-340 38-356 (421)
250 TIGR00700 GABAtrnsam 4-aminobu 99.8 2.1E-16 4.6E-21 147.4 24.0 287 33-342 31-356 (420)
251 TIGR01885 Orn_aminotrans ornit 99.8 5.1E-16 1.1E-20 144.3 26.0 277 33-339 35-342 (401)
252 PRK13237 tyrosine phenol-lyase 99.8 7.3E-16 1.6E-20 140.9 25.6 243 72-342 73-351 (460)
253 PRK06918 4-aminobutyrate amino 99.8 4.9E-16 1.1E-20 146.1 24.8 284 34-341 53-378 (451)
254 PRK08360 4-aminobutyrate amino 99.7 6.9E-16 1.5E-20 144.3 24.5 269 33-323 39-341 (443)
255 PLN02624 ornithine-delta-amino 99.7 3.5E-16 7.6E-21 147.6 22.5 243 34-299 74-339 (474)
256 COG0626 MetC Cystathionine bet 99.7 8.4E-16 1.8E-20 138.5 23.5 221 77-333 63-291 (396)
257 PRK13034 serine hydroxymethylt 99.7 3.2E-15 6.9E-20 139.1 27.4 265 34-332 27-311 (416)
258 PRK06434 cystathionine gamma-l 99.7 8E-16 1.7E-20 140.6 22.3 218 77-333 64-287 (384)
259 KOG0053 Cystathionine beta-lya 99.7 1E-15 2.2E-20 136.3 21.8 216 78-329 78-298 (409)
260 KOG1368 Threonine aldolase [Am 99.7 2.3E-16 5E-21 132.6 16.5 276 34-341 20-311 (384)
261 PRK07495 4-aminobutyrate amino 99.7 1.7E-15 3.7E-20 141.0 23.9 284 33-343 38-358 (425)
262 COG2873 MET17 O-acetylhomoseri 99.7 3.2E-15 7E-20 129.7 20.5 222 77-329 62-315 (426)
263 TIGR01788 Glu-decarb-GAD gluta 99.7 1.2E-14 2.6E-19 134.7 25.9 302 8-333 15-353 (431)
264 TIGR01814 kynureninase kynuren 99.7 1.2E-14 2.6E-19 135.4 25.4 194 35-251 26-240 (406)
265 PRK02769 histidine decarboxyla 99.7 5.5E-14 1.2E-18 128.6 28.5 236 79-334 63-320 (380)
266 PRK08117 4-aminobutyrate amino 99.7 8.2E-15 1.8E-19 137.3 23.6 269 33-324 41-345 (433)
267 PF01212 Beta_elim_lyase: Beta 99.7 4E-17 8.6E-22 143.4 7.0 260 53-339 7-283 (290)
268 PRK06058 4-aminobutyrate amino 99.7 5.5E-14 1.2E-18 131.9 27.9 284 34-339 55-376 (443)
269 PRK04311 selenocysteine syntha 99.7 1.9E-14 4.2E-19 134.2 24.4 251 51-326 96-377 (464)
270 KOG1360 5-aminolevulinate synt 99.7 2.8E-15 6E-20 130.8 16.8 252 48-330 181-450 (570)
271 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 2.7E-15 5.9E-20 136.4 17.4 231 79-333 68-328 (417)
272 COG0076 GadB Glutamate decarbo 99.7 5.2E-14 1.1E-18 130.9 25.6 268 51-332 72-368 (460)
273 PRK03715 argD acetylornithine 99.7 4.3E-14 9.2E-19 130.6 23.3 269 33-324 34-316 (395)
274 COG4992 ArgD Ornithine/acetylo 99.7 1.1E-14 2.3E-19 129.4 18.1 266 33-325 40-323 (404)
275 PRK05964 adenosylmethionine--8 99.7 4.2E-14 9.2E-19 132.2 23.3 270 33-324 40-345 (423)
276 PRK13580 serine hydroxymethylt 99.6 1.1E-13 2.5E-18 128.0 25.6 281 34-342 48-375 (493)
277 PRK09264 diaminobutyrate--2-ox 99.6 1.3E-13 2.8E-18 128.8 26.0 289 33-343 37-360 (425)
278 PLN03032 serine decarboxylase; 99.6 3.7E-13 7.9E-18 122.4 28.1 263 55-337 37-326 (374)
279 TIGR00474 selA seryl-tRNA(sec) 99.6 9.9E-14 2.1E-18 129.2 24.8 251 51-325 91-371 (454)
280 COG0075 Serine-pyruvate aminot 99.6 1.3E-13 2.8E-18 123.6 23.0 256 51-330 14-288 (383)
281 TIGR02407 ectoine_ectB diamino 99.6 2.5E-13 5.5E-18 126.2 25.5 289 33-343 33-356 (412)
282 TIGR00709 dat 2,4-diaminobutyr 99.6 1.4E-13 3E-18 129.0 23.2 267 33-324 37-343 (442)
283 PRK06541 hypothetical protein; 99.6 3E-13 6.5E-18 127.1 25.0 269 34-325 51-365 (460)
284 COG1103 Archaea-specific pyrid 99.6 3.2E-13 7E-18 112.4 22.0 191 52-261 28-233 (382)
285 PTZ00094 serine hydroxymethylt 99.6 5.5E-13 1.2E-17 125.6 26.1 267 34-332 33-328 (452)
286 PLN02271 serine hydroxymethylt 99.6 6.1E-12 1.3E-16 117.3 28.8 289 35-343 148-472 (586)
287 PLN02590 probable tyrosine dec 99.6 4.3E-12 9.4E-17 120.2 28.1 262 58-333 148-455 (539)
288 PLN03226 serine hydroxymethylt 99.6 4.3E-12 9.4E-17 119.4 27.7 286 34-342 33-350 (475)
289 cd00611 PSAT_like Phosphoserin 99.6 3.6E-13 7.9E-18 123.0 19.7 242 51-328 8-281 (355)
290 COG0160 GabT 4-aminobutyrate a 99.6 9.6E-13 2.1E-17 120.4 21.9 268 34-324 55-359 (447)
291 COG0001 HemL Glutamate-1-semia 99.6 4.4E-12 9.5E-17 114.1 24.9 278 34-338 52-359 (432)
292 PRK05769 4-aminobutyrate amino 99.5 2.3E-12 5E-17 120.7 24.0 271 33-324 52-357 (441)
293 PRK08593 4-aminobutyrate amino 99.5 2.6E-12 5.7E-17 120.4 23.7 270 33-323 40-344 (445)
294 PLN02880 tyrosine decarboxylas 99.5 5.2E-12 1.1E-16 119.4 25.5 197 58-261 100-322 (490)
295 PF00464 SHMT: Serine hydroxym 99.5 1.9E-12 4.1E-17 117.5 21.5 288 34-343 19-337 (399)
296 PRK15029 arginine decarboxylas 99.5 1.1E-12 2.5E-17 127.7 21.4 167 78-259 206-398 (755)
297 PLN02724 Molybdenum cofactor s 99.5 3.7E-12 8.1E-17 127.6 24.7 206 37-261 35-277 (805)
298 KOG1359 Glycine C-acetyltransf 99.5 1.9E-13 4E-18 115.0 12.7 209 33-278 65-286 (417)
299 PLN02263 serine decarboxylase 99.5 3.3E-11 7.1E-16 111.6 28.3 245 78-340 130-396 (470)
300 PLN02414 glycine dehydrogenase 99.5 3.4E-12 7.3E-17 127.8 23.3 162 81-261 572-749 (993)
301 PLN02994 1-aminocyclopropane-1 99.5 5.8E-13 1.3E-17 105.4 12.8 115 16-136 23-153 (153)
302 PF00282 Pyridoxal_deC: Pyrido 99.5 1.5E-11 3.2E-16 112.5 23.7 265 57-337 56-367 (373)
303 PLN02482 glutamate-1-semialdeh 99.5 9.8E-12 2.1E-16 116.8 23.1 264 34-324 98-386 (474)
304 TIGR03372 putres_am_tran putre 99.5 1.1E-11 2.5E-16 115.5 23.2 267 33-324 73-365 (442)
305 PRK04013 argD acetylornithine/ 99.5 1.4E-11 3E-16 112.2 22.4 232 33-293 22-266 (364)
306 COG0112 GlyA Glycine/serine hy 99.5 4.2E-11 9E-16 105.5 24.3 268 34-332 25-309 (413)
307 PF04864 Alliinase_C: Allinase 99.5 4.9E-13 1.1E-17 115.8 11.8 216 79-325 45-278 (363)
308 PRK11522 putrescine--2-oxoglut 99.5 1.9E-11 4.1E-16 114.8 23.4 268 34-324 81-372 (459)
309 PRK13578 ornithine decarboxyla 99.5 8.2E-12 1.8E-16 120.7 20.5 166 79-259 176-367 (720)
310 PRK00615 glutamate-1-semialdeh 99.5 2.7E-11 5.8E-16 112.9 22.8 266 33-323 51-340 (433)
311 PRK12389 glutamate-1-semialdeh 99.4 3.8E-11 8.1E-16 112.3 23.8 266 33-324 51-340 (428)
312 PRK06105 aminotransferase; Pro 99.4 3.5E-11 7.6E-16 113.3 23.4 269 33-325 46-365 (460)
313 TIGR01364 serC_1 phosphoserine 99.4 3.1E-11 6.7E-16 109.7 22.2 245 53-329 3-274 (349)
314 TIGR03799 NOD_PanD_pyr putativ 99.4 1.2E-10 2.6E-15 110.5 26.9 255 61-333 110-427 (522)
315 PLN02760 4-aminobutyrate:pyruv 99.4 6E-11 1.3E-15 112.5 24.9 270 33-324 87-406 (504)
316 PRK07046 aminotransferase; Val 99.4 4.6E-11 1E-15 112.1 23.9 259 34-323 74-362 (453)
317 PRK05965 hypothetical protein; 99.4 3.5E-11 7.6E-16 113.2 23.2 269 33-324 44-361 (459)
318 PRK07482 hypothetical protein; 99.4 4.3E-11 9.3E-16 112.7 23.4 268 33-323 48-365 (461)
319 PRK03080 phosphoserine aminotr 99.4 7.6E-12 1.7E-16 115.3 17.9 248 36-330 12-296 (378)
320 PRK05639 4-aminobutyrate amino 99.4 6E-11 1.3E-15 111.4 23.3 267 34-324 52-359 (457)
321 PRK07986 adenosylmethionine--8 99.4 4.2E-11 9.2E-16 111.5 21.6 269 33-324 41-349 (428)
322 PRK13360 omega amino acid--pyr 99.4 7.5E-11 1.6E-15 110.5 23.3 271 33-325 44-362 (442)
323 PRK07678 aminotransferase; Val 99.4 1.6E-10 3.5E-15 108.6 25.2 265 33-322 45-356 (451)
324 PRK05630 adenosylmethionine--8 99.4 5.9E-11 1.3E-15 110.5 22.1 270 33-324 38-346 (422)
325 PRK12403 putative aminotransfe 99.4 1.1E-10 2.5E-15 109.8 24.1 247 33-298 52-340 (460)
326 PRK06082 4-aminobutyrate amino 99.4 1.2E-10 2.6E-15 109.6 24.1 267 34-324 71-367 (459)
327 PRK09221 beta alanine--pyruvat 99.4 1.2E-10 2.6E-15 109.2 23.4 273 33-325 47-365 (445)
328 TIGR02617 tnaA_trp_ase tryptop 99.4 1.2E-10 2.6E-15 105.8 21.8 278 34-342 40-359 (467)
329 PRK06149 hypothetical protein; 99.4 1.8E-10 4E-15 117.7 25.8 263 34-324 584-884 (972)
330 PRK06173 adenosylmethionine--8 99.4 1.5E-10 3.3E-15 107.9 23.2 268 33-324 42-351 (429)
331 PRK06062 hypothetical protein; 99.4 1.3E-10 2.7E-15 109.3 22.6 245 33-298 51-330 (451)
332 TIGR00508 bioA adenosylmethion 99.4 1.3E-10 2.8E-15 108.6 22.1 269 34-325 44-353 (427)
333 PRK06943 adenosylmethionine--8 99.4 4.9E-10 1.1E-14 105.3 25.6 268 33-324 52-367 (453)
334 PRK15400 lysine decarboxylase 99.4 4.3E-11 9.4E-16 115.6 18.8 162 79-257 197-377 (714)
335 PRK07481 hypothetical protein; 99.4 5.1E-10 1.1E-14 105.2 25.3 271 33-324 40-359 (449)
336 KOG1357 Serine palmitoyltransf 99.4 1.7E-11 3.7E-16 109.0 13.9 253 51-334 154-432 (519)
337 PRK05355 3-phosphoserine/phosp 99.4 2.4E-10 5.2E-15 104.4 22.0 241 51-326 12-282 (360)
338 PRK06916 adenosylmethionine--8 99.4 3E-10 6.6E-15 106.9 23.3 268 34-324 55-370 (460)
339 KOG2862 Alanine-glyoxylate ami 99.4 2E-10 4.3E-15 97.8 19.5 208 99-329 67-304 (385)
340 PRK06917 hypothetical protein; 99.3 7.5E-10 1.6E-14 104.0 25.1 269 33-324 29-343 (447)
341 PRK07036 hypothetical protein; 99.3 6.1E-10 1.3E-14 105.0 24.6 269 33-324 49-367 (466)
342 PF00202 Aminotran_3: Aminotra 99.3 1.8E-10 3.8E-15 104.5 20.2 262 33-324 14-315 (339)
343 PRK15399 lysine decarboxylase 99.3 3.6E-10 7.8E-15 109.3 22.7 164 79-259 197-379 (713)
344 PRK07030 adenosylmethionine--8 99.3 7E-10 1.5E-14 104.5 24.2 269 33-324 45-361 (466)
345 PF06838 Met_gamma_lyase: Meth 99.3 1.1E-10 2.4E-15 102.1 17.2 176 78-278 55-248 (403)
346 PRK07480 putative aminotransfe 99.3 4.5E-10 9.8E-15 105.6 22.4 270 33-324 48-363 (456)
347 PRK06209 glutamate-1-semialdeh 99.3 2.8E-10 6.1E-15 106.5 20.4 206 33-260 46-265 (431)
348 PRK07483 hypothetical protein; 99.3 6.4E-10 1.4E-14 104.3 22.6 268 33-323 28-342 (443)
349 PRK06148 hypothetical protein; 99.3 6.4E-10 1.4E-14 113.9 24.1 264 34-324 623-924 (1013)
350 PRK08742 adenosylmethionine--8 99.3 2.5E-09 5.3E-14 100.9 26.1 248 33-298 62-357 (472)
351 PRK06938 diaminobutyrate--2-ox 99.3 2.9E-09 6.2E-14 100.3 24.9 268 34-323 62-367 (464)
352 COG0161 BioA Adenosylmethionin 99.2 2.5E-09 5.3E-14 97.7 18.5 268 33-324 42-359 (449)
353 COG1982 LdcC Arginine/lysine/o 99.2 3.4E-09 7.4E-14 98.8 19.7 165 79-259 72-244 (557)
354 PRK05367 glycine dehydrogenase 99.2 9.5E-09 2.1E-13 103.7 24.2 191 52-260 510-722 (954)
355 TIGR00461 gcvP glycine dehydro 99.2 2.4E-09 5.2E-14 106.4 19.3 170 77-261 526-711 (939)
356 PRK06931 diaminobutyrate--2-ox 99.2 3.1E-08 6.7E-13 93.3 26.1 268 34-323 57-361 (459)
357 KOG1404 Alanine-glyoxylate ami 99.2 2.3E-09 5.1E-14 94.1 17.0 266 33-324 48-351 (442)
358 KOG1358 Serine palmitoyltransf 99.2 1.6E-09 3.5E-14 95.0 15.2 266 33-330 92-380 (467)
359 TIGR01366 serC_3 phosphoserine 99.1 4.3E-09 9.2E-14 96.4 17.6 241 51-329 12-284 (361)
360 KOG1401 Acetylornithine aminot 99.1 2.3E-08 5E-13 88.6 21.1 270 33-324 54-351 (433)
361 TIGR03811 tyr_de_CO2_Ent tyros 99.1 5.7E-08 1.2E-12 93.4 25.1 159 53-218 95-325 (608)
362 PRK08297 L-lysine aminotransfe 99.1 3.9E-08 8.4E-13 92.3 23.5 209 33-248 43-297 (443)
363 TIGR03251 LAT_fam L-lysine 6-t 99.1 2.1E-07 4.6E-12 87.2 26.2 186 33-222 36-268 (431)
364 PLN02452 phosphoserine transam 99.0 4.6E-08 1E-12 89.2 20.9 257 34-328 5-288 (365)
365 COG1921 SelA Selenocysteine sy 99.0 4.7E-08 1E-12 87.4 20.0 240 35-299 20-267 (395)
366 TIGR00699 GABAtrns_euk 4-amino 99.0 1.8E-08 4E-13 94.4 17.8 210 33-251 56-328 (464)
367 PLN02974 adenosylmethionine-8- 99.0 3.5E-07 7.5E-12 91.1 25.1 243 36-298 366-705 (817)
368 COG4100 Cystathionine beta-lya 99.0 4.3E-08 9.3E-13 83.4 15.8 175 72-260 59-249 (416)
369 TIGR01365 serC_2 phosphoserine 99.0 9.8E-08 2.1E-12 87.1 19.5 238 57-330 19-287 (374)
370 KOG1383 Glutamate decarboxylas 98.9 3.6E-07 7.9E-12 82.4 20.9 245 77-333 116-381 (491)
371 PRK12462 phosphoserine aminotr 98.9 6.1E-07 1.3E-11 81.2 22.1 262 37-329 5-288 (364)
372 KOG1402 Ornithine aminotransfe 98.9 1.5E-07 3.3E-12 81.1 16.3 258 34-325 58-347 (427)
373 PRK12566 glycine dehydrogenase 98.9 6.4E-08 1.4E-12 96.0 15.2 175 71-259 530-722 (954)
374 PF03841 SelA: L-seryl-tRNA se 98.8 1.1E-08 2.3E-13 90.8 6.7 252 52-324 17-295 (367)
375 COG1003 GcvP Glycine cleavage 98.8 3.5E-07 7.6E-12 81.8 15.2 177 70-259 95-285 (496)
376 PLN02414 glycine dehydrogenase 98.7 7E-06 1.5E-10 83.2 22.5 181 51-261 115-314 (993)
377 PRK05367 glycine dehydrogenase 98.6 3.4E-06 7.3E-11 85.6 20.1 176 53-261 90-286 (954)
378 COG3033 TnaA Tryptophanase [Am 98.6 8.8E-06 1.9E-10 71.3 18.2 251 72-342 74-362 (471)
379 COG3844 Kynureninase [Amino ac 98.5 1.9E-05 4.1E-10 68.4 17.9 146 97-259 90-243 (407)
380 KOG2467 Glycine/serine hydroxy 98.5 6.2E-05 1.3E-09 66.2 20.7 276 52-343 51-358 (477)
381 PF05889 SLA_LP_auto_ag: Solub 98.3 1.5E-05 3.3E-10 71.6 13.8 168 101-280 75-250 (389)
382 TIGR00461 gcvP glycine dehydro 98.3 0.00024 5.3E-09 71.5 22.7 140 51-214 76-231 (939)
383 PF02347 GDC-P: Glycine cleava 98.1 0.0004 8.7E-09 64.0 18.4 222 81-330 114-369 (429)
384 KOG0628 Aromatic-L-amino-acid/ 98.0 0.00054 1.2E-08 62.3 16.5 143 73-220 105-279 (511)
385 KOG0629 Glutamate decarboxylas 98.0 0.00013 2.8E-09 65.5 12.2 180 72-259 132-334 (510)
386 KOG1403 Predicted alanine-glyo 98.0 0.00047 1E-08 59.3 14.6 225 53-299 62-326 (452)
387 COG0403 GcvP Glycine cleavage 97.7 0.025 5.4E-07 51.4 22.1 258 40-330 80-384 (450)
388 PLN02672 methionine S-methyltr 97.5 0.0046 9.9E-08 63.6 17.0 217 57-293 406-642 (1082)
389 PRK12566 glycine dehydrogenase 97.2 0.12 2.5E-06 52.7 21.7 187 39-261 83-288 (954)
390 COG1932 SerC Phosphoserine ami 97.1 0.049 1.1E-06 48.6 16.1 252 35-325 4-286 (365)
391 KOG1405 4-aminobutyrate aminot 97.0 0.016 3.4E-07 51.3 11.6 76 173-251 270-348 (484)
392 KOG3843 Predicted serine hydro 96.6 0.0083 1.8E-07 50.9 6.8 174 95-280 71-252 (432)
393 KOG2040 Glycine dehydrogenase 96.3 0.14 2.9E-06 49.2 13.6 130 77-216 578-720 (1001)
394 KOG3846 L-kynurenine hydrolase 92.1 4.2 9.1E-05 35.8 11.9 193 34-248 65-279 (465)
395 COG2102 Predicted ATPases of P 85.8 14 0.00031 31.0 10.3 151 102-278 3-168 (223)
396 KOG2790 Phosphoserine aminotra 85.8 24 0.00051 31.0 14.5 196 34-254 5-214 (370)
397 PF05368 NmrA: NmrA-like famil 83.0 14 0.00031 31.2 9.8 85 116-211 14-99 (233)
398 KOG1201 Hydroxysteroid 17-beta 82.9 21 0.00045 31.6 10.5 101 98-201 36-144 (300)
399 COG0552 FtsY Signal recognitio 78.6 15 0.00033 33.0 8.4 107 107-217 150-271 (340)
400 COG1105 FruK Fructose-1-phosph 77.1 41 0.0009 30.0 10.7 58 159-218 109-171 (310)
401 TIGR01470 cysG_Nterm siroheme 77.0 42 0.00092 28.0 11.6 96 98-214 7-103 (205)
402 TIGR00623 sula cell division i 76.6 38 0.00082 27.2 10.1 84 120-208 56-140 (168)
403 PRK10595 SOS cell division inh 74.6 43 0.00092 26.9 10.7 89 116-208 48-136 (164)
404 TIGR03573 WbuX N-acetyl sugar 71.1 75 0.0016 28.9 11.4 107 100-220 60-174 (343)
405 cd06568 GH20_SpHex_like A subg 71.1 10 0.00022 34.4 5.6 70 139-212 25-94 (329)
406 TIGR00289 conserved hypothetic 70.5 64 0.0014 27.4 9.9 97 103-209 4-114 (222)
407 cd02742 GH20_hexosaminidase Be 70.0 11 0.00024 33.7 5.6 69 139-212 23-91 (303)
408 TIGR00290 MJ0570_dom MJ0570-re 69.0 71 0.0015 27.1 10.4 97 103-209 4-114 (223)
409 PRK08265 short chain dehydroge 68.9 75 0.0016 27.3 10.8 94 101-200 7-108 (261)
410 PLN02591 tryptophan synthase 68.1 72 0.0016 27.6 9.9 158 33-211 28-194 (250)
411 PF13460 NAD_binding_10: NADH( 67.7 53 0.0011 26.3 8.9 78 115-207 13-90 (183)
412 COG0296 GlgB 1,4-alpha-glucan 67.6 7.2 0.00016 38.3 4.1 44 177-223 201-244 (628)
413 PRK04296 thymidine kinase; Pro 66.9 36 0.00077 27.9 7.7 95 110-217 17-117 (190)
414 COG1648 CysG Siroheme synthase 66.0 45 0.00098 28.0 8.1 90 98-209 10-100 (210)
415 PRK10886 DnaA initiator-associ 65.4 74 0.0016 26.4 9.2 35 170-211 107-141 (196)
416 cd06570 GH20_chitobiase-like_1 64.6 15 0.00033 32.9 5.4 62 139-211 25-86 (311)
417 cd06562 GH20_HexA_HexB-like Be 64.2 14 0.0003 33.8 5.1 65 139-212 25-89 (348)
418 PF01902 ATP_bind_4: ATP-bindi 62.6 78 0.0017 26.7 9.0 98 103-210 4-115 (218)
419 PLN00191 enolase 61.0 54 0.0012 31.2 8.5 99 108-213 296-395 (457)
420 cd01422 MGS Methylglyoxal synt 60.8 63 0.0014 24.1 7.4 63 144-211 44-106 (115)
421 PRK05678 succinyl-CoA syntheta 57.5 49 0.0011 29.3 7.2 76 130-217 50-127 (291)
422 COG0159 TrpA Tryptophan syntha 56.5 1.4E+02 0.003 26.1 9.5 91 110-205 108-203 (265)
423 PF14258 DUF4350: Domain of un 55.8 57 0.0012 21.6 6.0 59 138-212 11-70 (70)
424 smart00642 Aamy Alpha-amylase 54.7 17 0.00038 29.2 3.7 27 192-218 69-95 (166)
425 PF02571 CbiJ: Precorrin-6x re 54.2 1.4E+02 0.0031 25.8 9.4 101 99-203 129-248 (249)
426 TIGR01019 sucCoAalpha succinyl 54.0 62 0.0013 28.7 7.2 79 130-218 48-126 (286)
427 KOG1200 Mitochondrial/plastidi 53.6 1.2E+02 0.0025 25.4 8.0 99 101-201 14-120 (256)
428 PF04392 ABC_sub_bind: ABC tra 53.3 74 0.0016 28.1 7.8 143 54-210 13-164 (294)
429 KOG1467 Translation initiation 53.2 1.5E+02 0.0032 28.3 9.5 130 77-216 325-472 (556)
430 COG0352 ThiE Thiamine monophos 52.9 70 0.0015 26.9 7.0 52 163-216 24-75 (211)
431 PRK00077 eno enolase; Provisio 52.5 70 0.0015 30.1 7.8 93 111-211 265-361 (425)
432 PTZ00081 enolase; Provisional 52.2 79 0.0017 29.9 8.0 97 108-212 282-382 (439)
433 PF02603 Hpr_kinase_N: HPr Ser 51.9 26 0.00057 26.7 4.1 39 164-211 72-110 (127)
434 cd06569 GH20_Sm-chitobiase-lik 51.7 34 0.00073 32.4 5.6 73 139-211 29-115 (445)
435 TIGR00064 ftsY signal recognit 51.3 1.2E+02 0.0026 26.6 8.6 101 110-216 86-203 (272)
436 KOG2741 Dimeric dihydrodiol de 50.1 93 0.002 28.2 7.6 76 131-217 58-133 (351)
437 PRK11889 flhF flagellar biosyn 50.1 2.3E+02 0.0049 26.7 12.8 95 110-216 255-363 (436)
438 TIGR03815 CpaE_hom_Actino heli 50.0 1.9E+02 0.0041 25.9 12.0 56 160-216 160-215 (322)
439 PF02662 FlpD: Methyl-viologen 50.0 81 0.0018 23.9 6.5 57 146-206 29-90 (124)
440 KOG0630 Predicted pyridoxal-de 49.7 92 0.002 29.7 7.7 69 140-211 248-328 (838)
441 cd03313 enolase Enolase: Enola 49.5 73 0.0016 29.8 7.4 94 110-211 264-361 (408)
442 COG0826 Collagenase and relate 49.0 53 0.0012 30.0 6.2 70 142-214 23-102 (347)
443 cd06563 GH20_chitobiase-like T 48.6 37 0.00081 31.1 5.3 73 140-212 26-105 (357)
444 COG4221 Short-chain alcohol de 48.6 1.5E+02 0.0032 25.6 8.3 97 101-202 6-112 (246)
445 PF01408 GFO_IDH_MocA: Oxidore 47.8 75 0.0016 23.3 6.1 21 191-211 98-118 (120)
446 cd01994 Alpha_ANH_like_IV This 47.7 1.6E+02 0.0035 24.3 9.6 97 103-209 3-117 (194)
447 KOG2774 NAD dependent epimeras 47.2 1.5E+02 0.0032 25.5 7.9 75 137-223 93-168 (366)
448 COG1184 GCD2 Translation initi 46.4 2.2E+02 0.0047 25.5 10.7 103 98-211 117-226 (301)
449 CHL00200 trpA tryptophan synth 46.4 2E+02 0.0044 25.1 9.3 95 112-211 107-207 (263)
450 COG1066 Sms Predicted ATP-depe 45.4 2.7E+02 0.0058 26.2 10.6 113 94-211 86-215 (456)
451 PF03652 UPF0081: Uncharacteri 44.7 71 0.0015 24.7 5.5 59 159-217 36-99 (135)
452 TIGR02104 pulA_typeI pullulana 44.5 23 0.00049 35.1 3.4 28 192-219 228-255 (605)
453 KOG4589 Cell division protein 44.4 1.8E+02 0.004 24.1 8.2 37 166-204 128-165 (232)
454 COG2266 GTP:adenosylcobinamide 44.3 1.1E+02 0.0024 24.8 6.6 94 100-203 17-112 (177)
455 KOG1014 17 beta-hydroxysteroid 44.2 92 0.002 27.8 6.6 80 102-182 50-134 (312)
456 TIGR02012 tigrfam_recA protein 44.2 84 0.0018 28.4 6.6 133 77-216 38-193 (321)
457 COG0300 DltE Short-chain dehyd 43.8 2.2E+02 0.0047 25.0 8.8 97 102-200 7-113 (265)
458 PRK03892 ribonuclease P protei 43.6 2E+02 0.0042 24.2 11.0 109 100-211 60-171 (216)
459 PF00128 Alpha-amylase: Alpha 43.5 19 0.00042 31.6 2.6 28 192-219 51-78 (316)
460 PRK06194 hypothetical protein; 43.4 2.2E+02 0.0047 24.6 10.6 65 101-170 7-74 (287)
461 COG0074 SucD Succinyl-CoA synt 41.9 1.4E+02 0.0031 26.2 7.3 83 125-217 45-127 (293)
462 cd00532 MGS-like MGS-like doma 41.5 1.4E+02 0.0031 21.9 9.1 95 111-214 12-107 (112)
463 PRK15452 putative protease; Pr 41.2 82 0.0018 29.9 6.4 82 126-213 5-98 (443)
464 KOG1209 1-Acyl dihydroxyaceton 41.0 1.1E+02 0.0025 25.8 6.3 57 99-155 6-63 (289)
465 cd01121 Sms Sms (bacterial rad 40.9 3E+02 0.0064 25.5 10.8 123 77-211 66-205 (372)
466 PF03786 UxuA: D-mannonate deh 40.8 54 0.0012 29.9 4.8 39 173-211 25-63 (351)
467 PRK09354 recA recombinase A; P 40.7 1.1E+02 0.0025 27.9 7.0 133 77-216 43-198 (349)
468 PRK12772 bifunctional flagella 40.6 3.8E+02 0.0083 26.7 11.7 90 73-217 487-576 (609)
469 PF00728 Glyco_hydro_20: Glyco 40.1 46 0.00099 30.2 4.5 68 139-212 25-92 (351)
470 PRK07424 bifunctional sterol d 40.1 3.2E+02 0.0069 25.6 10.9 31 101-131 179-209 (406)
471 TIGR01060 eno phosphopyruvate 39.8 1.3E+02 0.0028 28.4 7.5 92 111-210 266-361 (425)
472 PRK10076 pyruvate formate lyas 39.6 2.3E+02 0.005 23.8 9.7 22 190-211 190-211 (213)
473 PF00106 adh_short: short chai 38.5 1.9E+02 0.004 22.4 9.0 95 103-202 3-111 (167)
474 PF03460 NIR_SIR_ferr: Nitrite 38.2 28 0.00061 23.0 2.1 27 179-206 11-37 (69)
475 PF04273 DUF442: Putative phos 38.0 33 0.00072 25.4 2.6 66 119-184 22-97 (110)
476 KOG2040 Glycine dehydrogenase 38.0 4.3E+02 0.0094 26.5 12.5 89 109-212 192-282 (1001)
477 PRK07063 short chain dehydroge 37.8 2.5E+02 0.0055 23.8 10.6 34 100-133 7-40 (260)
478 PRK04210 phosphoenolpyruvate c 37.6 3.6E+02 0.0078 26.6 9.9 88 78-171 9-107 (601)
479 PRK08339 short chain dehydroge 37.5 2.6E+02 0.0057 23.9 10.1 32 102-133 10-41 (263)
480 PF08672 APC2: Anaphase promot 37.3 39 0.00085 22.0 2.6 34 182-215 25-58 (60)
481 PF07745 Glyco_hydro_53: Glyco 37.3 2E+02 0.0044 26.1 7.9 43 178-222 45-87 (332)
482 TIGR00649 MG423 conserved hypo 37.2 3.6E+02 0.0077 25.3 10.1 95 101-206 287-400 (422)
483 PRK05884 short chain dehydroge 36.9 2.3E+02 0.005 23.6 8.1 31 103-133 3-33 (223)
484 COG2256 MGS1 ATPase related to 36.9 47 0.001 30.8 3.8 54 190-246 84-142 (436)
485 TIGR02026 BchE magnesium-proto 36.8 2.4E+02 0.0052 27.2 9.0 67 141-216 32-102 (497)
486 TIGR02402 trehalose_TreZ malto 36.8 48 0.001 32.4 4.2 29 191-219 158-186 (542)
487 cd00950 DHDPS Dihydrodipicolin 36.4 1.4E+02 0.0031 26.1 6.9 14 193-206 82-95 (284)
488 cd00951 KDGDH 5-dehydro-4-deox 36.3 1.5E+02 0.0033 26.2 7.0 45 159-204 16-64 (289)
489 PRK11070 ssDNA exonuclease Rec 36.0 4.4E+02 0.0096 26.1 11.5 101 107-217 53-162 (575)
490 PF04989 CmcI: Cephalosporin h 35.9 1.4E+02 0.0031 24.9 6.3 112 98-217 31-152 (206)
491 COG1377 FlhB Flagellar biosynt 35.8 3.5E+02 0.0075 24.9 9.1 90 73-217 231-320 (363)
492 PLN02417 dihydrodipicolinate s 35.5 3E+02 0.0066 24.1 8.8 87 102-214 72-162 (280)
493 PRK08862 short chain dehydroge 35.4 2.2E+02 0.0047 23.9 7.7 65 101-170 6-73 (227)
494 COG0373 HemA Glutamyl-tRNA red 35.3 2.9E+02 0.0063 25.9 8.8 93 104-214 181-274 (414)
495 PF04002 RadC: RadC-like JAB d 35.3 86 0.0019 23.7 4.6 49 160-209 50-103 (123)
496 PLN03244 alpha-amylase; Provis 34.9 63 0.0014 32.9 4.6 31 191-221 439-469 (872)
497 PF13407 Peripla_BP_4: Peripla 34.8 78 0.0017 26.8 4.9 65 138-211 21-85 (257)
498 PRK12936 3-ketoacyl-(acyl-carr 34.7 2.7E+02 0.0058 23.2 10.6 53 101-153 7-59 (245)
499 cd00983 recA RecA is a bacter 34.5 1.3E+02 0.0028 27.2 6.3 97 121-217 80-194 (325)
500 PRK09441 cytoplasmic alpha-amy 34.2 46 0.001 31.9 3.6 28 192-219 80-107 (479)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-54 Score=392.95 Aligned_cols=296 Identities=28% Similarity=0.469 Sum_probs=266.8
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc-EEEecChHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAI 113 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-i~~~~g~~~al 113 (343)
..+|+|++|+|+ +++++.+++++.+++.++.. .|.+..|.++||++|++++.+++|..+.+++ |++|+|++++|
T Consensus 28 ~~vi~l~iG~Pd----~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al 102 (393)
T COG0436 28 EDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL 102 (393)
T ss_pred CCEEEeCCCCCC----CCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence 579999999965 88999999999999887644 7879999999999999999999998888886 99999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
..++.+++++||+|++++|.|+.|.......|.+++.+++..+ ++|.+|++.|+++++++++++++++||||||.++++
T Consensus 103 ~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~ 182 (393)
T COG0436 103 FLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSK 182 (393)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCH
Confidence 9999999999999999999999999999999999999998665 489999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
+++++|+++|++||+++|.||+|..+.|++..+.++..+.. .+++|+++||||+|+++|||+||+++++ +++
T Consensus 183 ~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~-------~~l 255 (393)
T COG0436 183 EELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPP-------EEL 255 (393)
T ss_pred HHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecCh-------HHH
Confidence 99999999999999999999999999999865555555554 4789999999999999999999999963 468
Q ss_pred HHHHhhhhc-cccCcchHHHHHHHhccchhhH--HHHH-HHHHHHHHHHHHHHhhcCCCCceeeC-CCCceEeeecC
Q 019298 272 VERMKKYFD-ILGDPATFIQVCIMYGCLSTIM--QIMI-HGNFLENFAGSCVPSYKLIPELINFK-STGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~--~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~-~~~g~~~~~~l 343 (343)
++.+.+++. ...+++.+.|.++ .++|++.. .+++ .++.+++||+.+.+.|.+++|+.+.. |+|++|+|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~Q~aa-~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i 331 (393)
T COG0436 256 IAALRKLKSYLTSCAPTPAQYAA-IAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKI 331 (393)
T ss_pred HHHHHHHHHhcccCCCHHHHHHH-HHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeec
Confidence 888887754 4668999999999 88888763 4555 77899999999999999998899777 89999999874
No 2
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-52 Score=356.48 Aligned_cols=328 Identities=55% Similarity=0.949 Sum_probs=305.8
Q ss_pred cccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhh
Q 019298 14 IITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93 (343)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~ 93 (343)
...++.++..+...-++ +..+++|.|++|+|+.++.+.+.++..+|+.++++.+..++|.|+.|....|+++|+|+.+.
T Consensus 41 ~~tir~i~~~l~~~~~p-~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~ 119 (447)
T KOG0259|consen 41 SVTIRGILSALFDCCDP-EKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRD 119 (447)
T ss_pred cccHHHHHHHHhhcCCc-ccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcC
Confidence 55788888888887765 23458999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC
Q 019298 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN 173 (343)
Q Consensus 94 ~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 173 (343)
..-.++++.|++|+|+++||+.++.+|.+||..|++|+|+|+-|...+...|++++++++.++.+|.+|++.+|..++++
T Consensus 120 l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DEN 199 (447)
T KOG0259|consen 120 LPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADEN 199 (447)
T ss_pred CCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccC
Confidence 77779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCc
Q 019298 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (343)
Q Consensus 174 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r 253 (343)
|.++++.||+||+|.+++.+.|++|+++|+++++.+|.||+|.+++|++.++.++..+.....||.++|.||.|-.||||
T Consensus 200 T~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWR 279 (447)
T KOG0259|consen 200 TVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWR 279 (447)
T ss_pred eeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCce
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred EEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccch-hhHHHHH-HHHHHHHHHHHHHHhhcCCCCce-e
Q 019298 254 LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLS-TIMQIMI-HGNFLENFAGSCVPSYKLIPELI-N 330 (343)
Q Consensus 254 ~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~-~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~-~ 330 (343)
+||++.-|+..+.++...++.+++..+....++.+.|.|+ -.+|. .+.++.+ .+..++.+.+...+.|.++|++. .
T Consensus 280 lGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~Al-P~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp 358 (447)
T KOG0259|consen 280 LGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGAL-PDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCP 358 (447)
T ss_pred eeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHh-HHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccC
Confidence 9999999999999898888999999888889999999999 55554 3556655 88899999999999999999999 7
Q ss_pred eCCCCceEeeecC
Q 019298 331 FKSTGSSLKYLDL 343 (343)
Q Consensus 331 ~~~~~g~~~~~~l 343 (343)
..|+|.+|+|+.+
T Consensus 359 ~kPeg~mylmv~l 371 (447)
T KOG0259|consen 359 VKPEGCMYLMVKL 371 (447)
T ss_pred cCCCcceEEEecc
Confidence 8999999999874
No 3
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=8.8e-51 Score=377.42 Aligned_cols=327 Identities=73% Similarity=1.180 Sum_probs=280.9
Q ss_pred cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP 95 (343)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 95 (343)
.+...++..+++.+++..+.++|+|++|+|+....+++++.+++++.+++......+|++..|.+++|+++++++++.+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g 91 (409)
T PLN02656 12 TIKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLP 91 (409)
T ss_pred hhhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 47777777777776667789999999999886556888999999999988876667899989999999999999998888
Q ss_pred CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCce
Q 019298 96 YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175 (343)
Q Consensus 96 ~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 175 (343)
..+++++|++|+|+++++..++.+++++||+|++++|+|+.+...+...|.+++.+++.+++++.+|++.+++.++++++
T Consensus 92 ~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~ 171 (409)
T PLN02656 92 YKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTV 171 (409)
T ss_pred CCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCce
Confidence 88999999999999999999999999999999999999999988889999999999987667788999999999988899
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255 (343)
Q Consensus 176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 255 (343)
++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++....++..++...++|+++||||+|+++|+|+|
T Consensus 172 ~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG 251 (409)
T PLN02656 172 ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLG 251 (409)
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEE
Confidence 99999999999999999999999999999999999999999999877554455445555689999999999999999999
Q ss_pred EEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCce-eeC
Q 019298 256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELI-NFK 332 (343)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~-~~~ 332 (343)
|++++++.....++++++++++......+++.+.|.++ ..+|.+ ...+++ .++.++++++.+.+.|+.++++. +..
T Consensus 252 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~ 330 (409)
T PLN02656 252 WFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAV-PTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHK 330 (409)
T ss_pred EEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHH-HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcC
Confidence 99997543332235788888876554456788899998 677753 345555 88899999999999999886654 458
Q ss_pred CCCceEeeecC
Q 019298 333 STGSSLKYLDL 343 (343)
Q Consensus 333 ~~~g~~~~~~l 343 (343)
|+||+|+|+++
T Consensus 331 p~gg~~~w~~l 341 (409)
T PLN02656 331 PEGSMAVMVKL 341 (409)
T ss_pred CCeEEEEEEec
Confidence 99999999875
No 4
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.2e-50 Score=377.63 Aligned_cols=326 Identities=53% Similarity=0.960 Sum_probs=274.0
Q ss_pred HHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCC
Q 019298 17 IKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96 (343)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 96 (343)
++..+............+.++|+|++|+|+.++.+++++.+.+++.++++....+.|++..|.+++|+++++++.+.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~ 113 (430)
T PLN00145 34 IRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPY 113 (430)
T ss_pred hhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCC
Confidence 44444444333321112668999999999887778999999999999987766678999899999999999999988888
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298 97 KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (343)
Q Consensus 97 ~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 176 (343)
.+++++|++|+|++++|..+++.+.++||+|++++|+|+.|...+...|.+++.+++.++++|.+|++.+++.+++++++
T Consensus 114 ~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 193 (430)
T PLN00145 114 ELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVA 193 (430)
T ss_pred CCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceE
Confidence 89999999999999999999999999999999999999999999999999999999877778999999999999889999
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (343)
Q Consensus 177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 256 (343)
+++++||||||.+++.+++++|+++|+++|+++|+||+|.++.|++....++..+....++|+++||||.|+++|+|+||
T Consensus 194 i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~ 273 (430)
T PLN00145 194 MVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGW 273 (430)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEE
Confidence 99999999999999999999999999999999999999999998765555555566667899999999999999999999
Q ss_pred EEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCcee-eCC
Q 019298 257 FVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELIN-FKS 333 (343)
Q Consensus 257 i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~-~~~ 333 (343)
++++++..+....++++.++.......+++.+.|.++ ..+|.+ ...+++ .++.++++++.+.+.|++++|+.+ ..|
T Consensus 274 iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P 352 (430)
T PLN00145 274 IATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAI-PQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKP 352 (430)
T ss_pred EEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCC
Confidence 9986544222111234455555554556788899998 667764 345555 889999999999999999888874 579
Q ss_pred CCceEeeecC
Q 019298 334 TGSSLKYLDL 343 (343)
Q Consensus 334 ~~g~~~~~~l 343 (343)
+||+|+|+++
T Consensus 353 ~ga~y~~v~l 362 (430)
T PLN00145 353 EGSMFVMVKL 362 (430)
T ss_pred CeeeEEEecc
Confidence 9999999874
No 5
>PLN02187 rooty/superroot1
Probab=100.00 E-value=4.6e-50 Score=376.18 Aligned_cols=324 Identities=46% Similarity=0.844 Sum_probs=271.6
Q ss_pred ccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhC
Q 019298 15 ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94 (343)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~ 94 (343)
.+++.+...+.+...+ ....++|+|++|+|+..+.+.+++.+.+++.+++..+....|++..|.++||+++|+|+++++
T Consensus 47 ~~~~~~~~~~~~~~~~-~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~ 125 (462)
T PLN02187 47 VTLRGVIYMLFDNCGK-DVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDL 125 (462)
T ss_pred chHhhHHHHHHhhccc-CCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhc
Confidence 3677776666554322 347889999999988766678889999999998876666789998999999999999999888
Q ss_pred CCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCc
Q 019298 95 PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174 (343)
Q Consensus 95 ~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 174 (343)
+.++++++|++|+|++++|..++++++++||.|++++|+|+.|...+...|.+++.+++.++++|.+|+++|++++++++
T Consensus 126 ~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~ 205 (462)
T PLN02187 126 PHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENT 205 (462)
T ss_pred CCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCc
Confidence 88999999999999999999999999999999999999999999999999999999998776789999999999988889
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 175 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
+++++++||||||.+++.+++++|+++|++||+++|+||+|.++.|++..+.++..+....++|+++||||+|+++|+|+
T Consensus 206 ~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRi 285 (462)
T PLN02187 206 VAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKI 285 (462)
T ss_pred EEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCcccee
Confidence 99999999999999999999999999999999999999999999987655445555555457999999999999999999
Q ss_pred EEEEEeCCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCce
Q 019298 255 GWFVTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 255 G~i~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
||++++++..+. ++++.+..... ...+++.+.|.++ .++|.+ ...+++ .++.++++++.+.+.|++++++.
T Consensus 286 G~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~-~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~ 361 (462)
T PLN02187 286 GWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAAL-PAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVV 361 (462)
T ss_pred EEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHH-HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 999986533111 13345554433 2335578899998 777753 346666 88999999999999999986554
Q ss_pred -eeCCCCceEeeecC
Q 019298 330 -NFKSTGSSLKYLDL 343 (343)
Q Consensus 330 -~~~~~~g~~~~~~l 343 (343)
+..|+||+|+|+++
T Consensus 362 ~~~~P~gg~fl~~~l 376 (462)
T PLN02187 362 CPKKPESCTYLLTKL 376 (462)
T ss_pred CCCCCCEeEEEEeec
Confidence 45789999999863
No 6
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-50 Score=351.17 Aligned_cols=290 Identities=26% Similarity=0.371 Sum_probs=255.2
Q ss_pred eccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHH
Q 019298 40 LAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMA 118 (343)
Q Consensus 40 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~ 118 (343)
|+.|.|+ +++|+-+.+++++++.+...++|.+..|.++|++++++.++..+|....+ ++|++|.|+.++|..++.
T Consensus 36 LgqGfp~----~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFPD----FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCCC----CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence 9999965 88999999999999988888999999999999999999999988766555 579999999999999999
Q ss_pred HhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC------CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 119 LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL------PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 119 ~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
.++++||+|++++|.|..|....++.|...+.++.. ..++|.+|.+.++.++++++++|++|+||||||.++|+
T Consensus 112 ~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsR 191 (420)
T KOG0257|consen 112 GLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSR 191 (420)
T ss_pred HHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCH
Confidence 999999999999999999999999999999999987 45679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
++|++|+++|++||+++|.||+|..+.|++..+..+.+++ ..++++.++|+||+||+.|||+||++++ +.+
T Consensus 192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp--------~~L 263 (420)
T KOG0257|consen 192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGP--------KHL 263 (420)
T ss_pred HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeech--------HHh
Confidence 9999999999999999999999999999998776666663 4568999999999999999999999994 257
Q ss_pred HHHHhhhhc-cccCcchHHHHHHHhccchh------h--HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298 272 VERMKKYFD-ILGDPATFIQVCIMYGCLST------I--MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL 341 (343)
Q Consensus 272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~------~--~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~ 341 (343)
...++...+ ....++...|.|. .+++.. + ..+.+ +.+.++++|+.+.+.|..+ |+++..|+|++|+|+
T Consensus 264 ~~~~~~vh~~~~~~~~Tp~q~A~-a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~a 341 (420)
T KOG0257|consen 264 YSALFPVHQNFVFTCPTPIQEAS-AAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWA 341 (420)
T ss_pred hhhHHHHhhccccccCcHHHHHH-HHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEE
Confidence 777776643 3445566666665 333321 1 15555 8999999999999999999 999999999999999
Q ss_pred cC
Q 019298 342 DL 343 (343)
Q Consensus 342 ~l 343 (343)
++
T Consensus 342 df 343 (420)
T KOG0257|consen 342 DF 343 (420)
T ss_pred ec
Confidence 85
No 7
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=9.3e-50 Score=370.37 Aligned_cols=311 Identities=53% Similarity=0.971 Sum_probs=261.1
Q ss_pred ccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+.++++|+|++|+|+.+..+++++.+.+++.+++.......|+++.|.++||+++++|+.+++|.++++++|++|+|+++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~ 108 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH 108 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH
Confidence 44889999999998765568899999999999887766678999899999999999999988888899999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~ 191 (343)
++..++++++++||.|++++|+|+.|...+...|.+++.+++.++++|.+|+++|+++++.+++++++++||||||.+++
T Consensus 109 al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s 188 (409)
T PLN00143 109 AAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYS 188 (409)
T ss_pred HHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccC
Confidence 99999999999999999999999999999999999999999876678889999999988888899999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
.+++++|+++|++|++++|+||+|.++.+++....++..+...+++|+++||||.|+++|+|+||++++++..+....+.
T Consensus 189 ~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~ 268 (409)
T PLN00143 189 YEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEI 268 (409)
T ss_pred HHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHH
Confidence 99999999999999999999999999998765444444455556899999999999999999999999654322100123
Q ss_pred HHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCce-eeCCCCceEeeecC
Q 019298 272 VERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELI-NFKSTGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~~~~~~l 343 (343)
++.+++.......++.+.|.++ ..+|.+ ...+++ .++.++++++.+.+.|+++++.. ...|+||+|+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l 342 (409)
T PLN00143 269 ADSIKKALNPAPFPPTFIQAAI-PEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKL 342 (409)
T ss_pred HHHHHHHHhccCCCCchHHHHH-HHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEec
Confidence 4444444432334577888888 666653 345655 88889999999999998885544 34789999999975
No 8
>PLN02368 alanine transaminase
Probab=100.00 E-value=5.5e-50 Score=368.89 Aligned_cols=331 Identities=21% Similarity=0.346 Sum_probs=264.5
Q ss_pred cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-------CC-------------------CCCCcH
Q 019298 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-------HS-------------------CFHTTH 55 (343)
Q Consensus 2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-------~~-------------------~~~~~~ 55 (343)
.+|+|..+++.+ ....+.....+-. ..+.++|+|++|+|+. +. .+.+++
T Consensus 10 ~~~~~~~~~~~~--~~~~~~~~a~~~~---~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~ 84 (407)
T PLN02368 10 SLNENVKKCQYA--VRGELYLRASELQ---KEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPAD 84 (407)
T ss_pred hcCHHHHhhhhh--cCCHHHHHHHHHH---HHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHH
Confidence 356777777776 3333332222211 2277999999999851 10 012556
Q ss_pred HHHHHHHHHHh-cCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEeCCC
Q 019298 56 VATEAVAEALL-SEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPG 133 (343)
Q Consensus 56 ~~~~~~~~~~~-~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~vl~~~p~ 133 (343)
.+.++++.... ......|+++.|.++||+++++|+.+++|..+++++|++|+|+++++..++.+++ ++||.|++++|+
T Consensus 85 ~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~ 164 (407)
T PLN02368 85 AIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQ 164 (407)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCC
Confidence 66666654322 2346689999999999999999999888888999999999999999999999987 799999999999
Q ss_pred CcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCc
Q 019298 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207 (343)
Q Consensus 134 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 207 (343)
|+.|...+...|.+++.++++.+++|.+|++.+++.+++ +++++++++||||||.+++.+++++|+++|++||+
T Consensus 165 Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~ 244 (407)
T PLN02368 165 YPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERL 244 (407)
T ss_pred CccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 999999999999999999998777899999999998864 57889999999999999999999999999999999
Q ss_pred EEEEccCCCccccCCC-CCCccccc----C----CCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhh
Q 019298 208 LVIADEVYGHLVFGDK-PFVPMGVF----G----STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277 (343)
Q Consensus 208 ~~i~D~ay~~~~~~~~-~~~~~~~~----~----~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~ 277 (343)
++|+||+|.++.|++. .+.++..+ . ..+++|+++||||+| +++|+|+||+++.+. ++++++++.+
T Consensus 245 ~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~-----~~~li~~~~~ 319 (407)
T PLN02368 245 VLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI-----PPKTVEEIYK 319 (407)
T ss_pred EEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCC-----CHHHHHHHHH
Confidence 9999999999998764 33333221 1 235899999999998 899999999986210 2468888887
Q ss_pred hhccccCcchHHHHHHHhccchhhH-------HHHH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 278 YFDILGDPATFIQVCIMYGCLSTIM-------QIMI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 278 ~~~~~~~~~~~~~~a~~~~~l~~~~-------~~l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.....++++.++|.++ .++|..+. .+.+ +++.++++|+.+.+.|+++||+.+..|+||||+|+++
T Consensus 320 ~~~~~~~~~~~~Q~aa-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i 395 (407)
T PLN02368 320 VASIALSPNVSGQIFM-GLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQI 395 (407)
T ss_pred HhcccCCCCcHHHHHH-HHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCC
Confidence 7544567888999998 77776431 2332 6789999999999999999999988999999999764
No 9
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=2e-49 Score=366.70 Aligned_cols=323 Identities=16% Similarity=0.204 Sum_probs=263.6
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|++|+|...++.. ....+........ ..+.++++|+.|++. +++++.+.+++++.+......+|+++.|.+
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~ 71 (388)
T PRK07366 1 MQFAQRLQPLQSN--VFADMDRAKAQAR---AAGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTL 71 (388)
T ss_pred CchhhhhhcCCcc--HHHHHHHHHHHHH---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCH
Confidence 5678887666544 3333333222211 236779999999954 777899999999887655556899989999
Q ss_pred HHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
+||+++++++.+.+|..++++ +|++|+|++++|..++++++++||+|++++|+|+.|...++..|.+++.+++++++++
T Consensus 72 ~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 151 (388)
T PRK07366 72 DFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDF 151 (388)
T ss_pred HHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCC
Confidence 999999999998889889998 6999999999999999999999999999999999999999999999999999877778
Q ss_pred CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCC-CCcccccCCC-CCE
Q 019298 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPMGVFGST-VPI 237 (343)
Q Consensus 160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~-~~~~~~~~~~-~~~ 237 (343)
.+|++++++.+..+++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++.. ..++..++.. .++
T Consensus 152 ~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~v 231 (388)
T PRK07366 152 LPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVS 231 (388)
T ss_pred CCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccE
Confidence 89999998877777899999999999999999999999999999999999999999999887643 3444444332 478
Q ss_pred EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccc-cCc-chHHHHHHHhccchhhHHHHH-HHHHHHHH
Q 019298 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL-GDP-ATFIQVCIMYGCLSTIMQIMI-HGNFLENF 314 (343)
Q Consensus 238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~-~~~-~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~ 314 (343)
|+++||||+||++|+|+||++++ +++++++.+..... .+. +...+.++ ++|.+..++++ .++.++++
T Consensus 232 i~~~SfSK~~g~~GlRiG~~v~~--------~~li~~l~~~~~~~~~~~~~~~~~~a~--~~l~~~~~~l~~~~~~~~~~ 301 (388)
T PRK07366 232 IEFFTLSKSYNMGGFRIGFAIGN--------AQLIQALRQVKAVVDFNQYRGILNGAI--AALTGPQATVQQTVQIFRQR 301 (388)
T ss_pred EEEeecccccCCcchhheehcCC--------HHHHHHHHHHHhhcccCCCHHHHHHHH--HHHhCcHHHHHHHHHHHHHH
Confidence 99999999999999999999984 47888888775432 233 33334444 34433345665 89999999
Q ss_pred HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 315 AGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus 302 r~~l~~~L~~~-~~~~~~p~~g~f~~~~~ 329 (388)
T PRK07366 302 RDAFINALHQI-GWPVPLPEATMYVWAKL 329 (388)
T ss_pred HHHHHHHHHHC-CCcccCCCeeEEEEEEC
Confidence 99999999988 78777899999999975
No 10
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=2.6e-49 Score=377.16 Aligned_cols=332 Identities=20% Similarity=0.353 Sum_probs=269.0
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|++|+|..+..++ .+..+.....+-. ..+.++|+|++|+|+.+ .+++++.+.+++.+++.. ..+|++..|.+
T Consensus 117 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~ 188 (517)
T PRK13355 117 FKKSHKLDNVLYD--VRGPVVDEANRME---AAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKGLF 188 (517)
T ss_pred CChhHHhhccCcc--HHHHHHHHHHHHH---HcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcChH
Confidence 3467787777776 4444544443332 23778999999998643 266788999999888753 35799999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
+||++|++++.++++..+++++|++|+|++++|..++.+++++||+|++++|+|+.|...++..|.+++.++++++++|.
T Consensus 189 ~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~ 268 (517)
T PRK13355 189 SARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWY 268 (517)
T ss_pred HHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCC
Confidence 99999999998766667899999999999999999999999999999999999999999999999999999988777899
Q ss_pred CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (343)
Q Consensus 161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (343)
+|+++++++++++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.|++....++..+.....++++
T Consensus 269 ~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~ 348 (517)
T PRK13355 269 PDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTF 348 (517)
T ss_pred CCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEE
Confidence 99999999998899999999999999999999999999999999999999999999999877555555555444457889
Q ss_pred ccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhh---HHHHHHHHHHHHHHHH
Q 019298 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTI---MQIMIHGNFLENFAGS 317 (343)
Q Consensus 241 ~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~---~~~l~~~~~~~~~~~~ 317 (343)
+||||+|+++|+|+||++++.+..+. .++++.+........+.+.++|.++ ..+|... .++++..+++.++|+.
T Consensus 349 ~S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~-~~aL~~~~~~~~~~~~~~~~~~~r~~ 425 (517)
T PRK13355 349 SGLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIV-QTALGGHQSVKDYLVPGGRVYEQREL 425 (517)
T ss_pred ecchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHH-HHHhcCCccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999975322110 1245555444443456788889888 6666532 3444434456677899
Q ss_pred HHHhhcCCCCceeeCCCCceEeeecC
Q 019298 318 CVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 318 ~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+.|+++||+.+..|+||+|+|+++
T Consensus 426 l~~~L~~~~g~~~~~p~g~fy~~~~l 451 (517)
T PRK13355 426 VYNALNAIPGISAVKPKAAFYIFPKI 451 (517)
T ss_pred HHHHHhcCCCcccCCCCeeeEEEeec
Confidence 99999999899988999999999764
No 11
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.9e-49 Score=363.72 Aligned_cols=323 Identities=17% Similarity=0.262 Sum_probs=270.0
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|++++|.....++ .+..+.....+.. ..+.+.++|+.|.|+ +++++.+.+++.+.+.......|++ .|.+
T Consensus 3 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~~-~G~~ 72 (399)
T PRK07681 3 YTLATRMKAFQSS--IFSELGAYKKEKI---AAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYTL-SGIQ 72 (399)
T ss_pred ccHhHHHhhcCcc--HHHHHHHHHHHhh---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCCC-CCcH
Confidence 4566666665655 4555544433322 236788999999965 6678889999988876543445654 7999
Q ss_pred HHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
+||+++++|+.+++|..+++ ++|++|+|+++++..++.+++++||.|++++|+|+.|...++..|.+++.++++++++|
T Consensus 73 ~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 152 (399)
T PRK07681 73 EFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDF 152 (399)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCC
Confidence 99999999999888988998 89999999999999999999999999999999999999999999999999999777778
Q ss_pred CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEE
Q 019298 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL 238 (343)
Q Consensus 160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i 238 (343)
.+|++++++.+.++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..++. .+++|
T Consensus 153 ~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i 232 (399)
T PRK07681 153 LPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGV 232 (399)
T ss_pred cCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEE
Confidence 89999999988778899999999999999999999999999999999999999999999887655444444443 35799
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG 316 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~ 316 (343)
+++||||+|+++|+|+||++++ +++++++..... ..++++.+.|.++ ..+|.+...+++ .++.++++++
T Consensus 233 ~~~S~SK~~~~~GlRiG~~i~~--------~~l~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~ 303 (399)
T PRK07681 233 EINSLSKSYSLAGSRIGYMIGN--------EEIVRALTQFKSNTDYGVFLPIQKAA-CAALRNGAAFCEKNRGIYQERRD 303 (399)
T ss_pred EEeecccccCCccceeEEEecC--------HHHHHHHHHHHhhcccCCCHHHHHHH-HHHHhCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999984 468888887754 3457888889888 777776556665 7888999999
Q ss_pred HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 317 SCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.+.|+++ |+.+..|++|+|+|+++
T Consensus 304 ~l~~~L~~~-g~~~~~p~~g~f~~~~l 329 (399)
T PRK07681 304 TLVDGFRTF-GWNVDKPAGSMFVWAEI 329 (399)
T ss_pred HHHHHHHHC-CCcccCCCeeeEEEEEC
Confidence 999999988 78877899999999975
No 12
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.2e-49 Score=363.24 Aligned_cols=328 Identities=20% Similarity=0.247 Sum_probs=270.7
Q ss_pred ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (343)
Q Consensus 3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l 82 (343)
+.+-+++..|.+. +++-..-+..-.+-+.-+.+.++|+.|.|+ ..++++.+.+++.+++......+|++..|.++|
T Consensus 8 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~---~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~L 83 (405)
T PRK06207 8 FARLGTDNAPGQE-VRQSAAGLEALLRGEPLPGRPVDFSHGDVD---AHEPTPGAFELFSAGVERGGVQAYTEYRGDADI 83 (405)
T ss_pred HHHhCCCCCCcHH-HHhhhhhhhhhhcCCcCCCCceecCCcCCC---CCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHH
Confidence 4566777777653 444443333333222337788999999976 245678888888888765555689999999999
Q ss_pred HHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC---CCCC
Q 019298 83 RRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL---PDKG 158 (343)
Q Consensus 83 r~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~ 158 (343)
|+++++++.+.+|..+++ ++|++|+|+++++..++++++++||+|++++|+|+.+...++..|.+++.++++ ++++
T Consensus 84 R~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~ 163 (405)
T PRK06207 84 RELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKR 163 (405)
T ss_pred HHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccC
Confidence 999999999988988888 899999999999999999999999999999999999999999999999999875 3346
Q ss_pred CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCE
Q 019298 159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPI 237 (343)
Q Consensus 159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~ 237 (343)
+++|+++|+++++++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..+. ..+++
T Consensus 164 ~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~v 243 (405)
T PRK06207 164 AGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENV 243 (405)
T ss_pred CCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcE
Confidence 88999999999888899999999999999999999999999999999999999999999998765444444332 24689
Q ss_pred EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHH
Q 019298 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFA 315 (343)
Q Consensus 238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~ 315 (343)
++++||||+|+++|+|+||++++ ++++++++..... ..+.+.+.|.++ ..+|.+...+++ .++.+++++
T Consensus 244 i~i~SfSK~~~lpGlRiG~ii~~--------~~l~~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~r 314 (405)
T PRK06207 244 ITIMGPSKTESLSGYRLGVAFGS--------PAIIDRMEKLQAIVSLRAAGYSQAVL-RTWFSEPDGWMKDRIARHQAIR 314 (405)
T ss_pred EEEecchhhccCcccceEEEEcC--------HHHHHHHHHHHhHhccCCCHHHHHHH-HHHHhCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999985 4688888877543 345677888888 777765445554 777888889
Q ss_pred HHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 316 GSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 316 ~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+.+.|++++++.+..|++|+|+|+++
T Consensus 315 ~~l~~~L~~~~~~~~~~p~gg~fl~~~l 342 (405)
T PRK06207 315 DDLLRVLRGVEGVFVRAPQAGSYLFPRL 342 (405)
T ss_pred HHHHHHHhcCCCceecCCCeeEEEEEeC
Confidence 9999999888788887899999999975
No 13
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=2.2e-48 Score=359.68 Aligned_cols=323 Identities=22% Similarity=0.286 Sum_probs=265.3
Q ss_pred cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL 81 (343)
Q Consensus 2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~ 81 (343)
++|++..+..++ .+..+.....+.. ..+.+.++|+.|.|+ ++.++.+.+++.+++.......|++..|.++
T Consensus 4 ~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~ 74 (389)
T PRK08068 4 EPSELLKQLPKQ--FFASLVAKVNKKV---AEGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPF 74 (389)
T ss_pred chhhHhhhcCcc--HHHHHHHHHHHHH---hcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHH
Confidence 456666665655 5555555443222 225678999999865 5566788999988877655678998899999
Q ss_pred HHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 82 TRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 82 lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
||+++++++.+.+|..++++ +|++|+|+++++..++..++++||+|++++|+|..|...++..|.+++.++++.++++.
T Consensus 75 lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~ 154 (389)
T PRK08068 75 LKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFL 154 (389)
T ss_pred HHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCC
Confidence 99999999998888889998 89999999999999999999999999999999999999999999999999987666788
Q ss_pred CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc-cCCCCCEEE
Q 019298 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV-FGSTVPILT 239 (343)
Q Consensus 161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~-~~~~~~~i~ 239 (343)
+|++++++.++++++++++++||||||.++|.+++++|+++|+++++++|+||+|.++.+++..+.++.. .+..+++++
T Consensus 155 ~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~ 234 (389)
T PRK08068 155 PDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIE 234 (389)
T ss_pred CCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEE
Confidence 9999999988778899999999999999999999999999999999999999999998886533333222 233458899
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGS 317 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~ 317 (343)
++||||+||++|+|+||++++ +++++++.+.... ..+.++..|.++ ..++.+..++++ .++.++++++.
T Consensus 235 ~~S~SK~~g~~GlRiG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~r~~ 305 (389)
T PRK08068 235 LYTLSKTFNMAGWRVAFAVGN--------ESVIEAINLLQDHLFVSLFGAIQDAA-IEALLSDQSCVAELVARYESRRNA 305 (389)
T ss_pred EecchhccCCccceeEeEecC--------HHHHHHHHHHHhhccCCCChHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999974 4788888877543 335555667776 444443345555 89999999999
Q ss_pred HHHhhcCCCCceeeCCCCceEeeecC
Q 019298 318 CVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 318 ~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+.|+.+ |+.+..|+||+|+|+++
T Consensus 306 ~~~~L~~~-g~~~~~~~g~~~~~v~~ 330 (389)
T PRK08068 306 FISACREI-GWEVDAPKGSFFAWMPV 330 (389)
T ss_pred HHHHHHHC-CCcccCCCeeEEEEEEC
Confidence 99999998 78877889999999874
No 14
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=3.9e-48 Score=359.52 Aligned_cols=315 Identities=24% Similarity=0.386 Sum_probs=266.0
Q ss_pred cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL 81 (343)
Q Consensus 2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~ 81 (343)
.+++|....+.+ .+..+.... . ..+.|+|+.|.|+ +++++.+.+++.+++.+. ...|+++.|.++
T Consensus 31 ~~~~~~~~~~~~--~~~~~~~~~---~-----~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~ 95 (413)
T PLN00175 31 QVAKRLEKFKTT--IFTQMSSLA---I-----KHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPE 95 (413)
T ss_pred chhHHhhcCCCC--HHHHHHHHh---h-----cCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHH
Confidence 345555555544 444433321 1 3478999999975 567888999999888763 468999999999
Q ss_pred HHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 82 TRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 82 lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
||+++++++++++|..++++ +|++|+|+++++..++.+++++||+|++++|+|..|...++..|.+++.+++++++ +.
T Consensus 96 Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~ 174 (413)
T PLN00175 96 LNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPD-FA 174 (413)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCccc-CC
Confidence 99999999998888888987 79999999999999999999999999999999999999999999999999987543 78
Q ss_pred CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEE
Q 019298 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILT 239 (343)
Q Consensus 161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~ 239 (343)
+|++.|++.+.++++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++. ..++..+.. .+++|+
T Consensus 175 ~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~ 253 (413)
T PLN00175 175 VPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVT 253 (413)
T ss_pred CCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEE
Confidence 999999999988899999999999999999999999999999999999999999999988653 234444433 468999
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGS 317 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~ 317 (343)
++||||.|+++|+|+||++++ +++++.+..... ...+++.+.|.++ ..+|.+...+++ .++.++++++.
T Consensus 254 i~SfSK~~~~~G~RiG~~v~~--------~~l~~~l~~~~~~~~~~~s~~~Q~a~-~~~l~~~~~~~~~~~~~~~~~~~~ 324 (413)
T PLN00175 254 MNSLGKTFSLTGWKIGWAIAP--------PHLTWGVRQAHSFLTFATATPMQWAA-VAALRAPESYYEELKRDYSAKKDI 324 (413)
T ss_pred EecchhhccCcchheeeeEeC--------HHHHHHHHHHHhhccCCCCHHHHHHH-HHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999985 368888877754 3568888999998 777776555655 88999999999
Q ss_pred HHHhhcCCCCceeeCCCCceEeeecC
Q 019298 318 CVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 318 ~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+.|+++ |+.+..|+||+|+|+++
T Consensus 325 l~~~L~~~-g~~~~~p~g~~f~~~~~ 349 (413)
T PLN00175 325 LVEGLKEV-GFKVYPSSGTYFVMVDH 349 (413)
T ss_pred HHHHHHHC-CCeecCCCeeEEEEEec
Confidence 99999998 78888899999999874
No 15
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=5.7e-48 Score=359.09 Aligned_cols=321 Identities=33% Similarity=0.555 Sum_probs=267.8
Q ss_pred cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhC-
Q 019298 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL- 94 (343)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~- 94 (343)
++......+.... .++++|+|+.|.|+..+.+.+++.+.+++.+.+.......|+++.|.++||+++++++++++
T Consensus 18 ~~~~~~~~~~~~~----~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~ 93 (412)
T PTZ00433 18 PLRTVTDNAKPSP----SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFV 93 (412)
T ss_pred cHHHHHHhhccCC----CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhcc
Confidence 4555555554432 37899999999987433356789999999998876556789998999999999999998754
Q ss_pred -----CCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhh
Q 019298 95 -----PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL 169 (343)
Q Consensus 95 -----~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 169 (343)
+..+++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++++|++++++.
T Consensus 94 ~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~ 173 (412)
T PTZ00433 94 HKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRL 173 (412)
T ss_pred ccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHH
Confidence 466889999999999999999999999999999999999999999999999999999987767789999999998
Q ss_pred hcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC
Q 019298 170 ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249 (343)
Q Consensus 170 ~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 249 (343)
++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+....++|+++||||.|++
T Consensus 174 ~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~ 253 (412)
T PTZ00433 174 VDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVV 253 (412)
T ss_pred hccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCC
Confidence 88889999999999999999999999999999999999999999999998876544455555544568999999999999
Q ss_pred CCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCC
Q 019298 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPE 327 (343)
Q Consensus 250 ~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g 327 (343)
+|+|+||++++++... .+++++.+++.....++++.+.|.++ ..++.+ ...+++ .++.++++++.+.+.|+.+.|
T Consensus 254 pGlRlG~~i~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 330 (412)
T PTZ00433 254 PGWRLGWLLLVDPHGN--GGDFLDGMKRLGMLVCGPCSVVQAAL-GEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIG 330 (412)
T ss_pred CCeeEEEEEEeCCccc--HHHHHHHHHHHhhccCCCChHHHHHH-HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999998543211 13577777766543457888999888 555553 355666 888999999999999998667
Q ss_pred ceeeCCCCceEeeecC
Q 019298 328 LINFKSTGSSLKYLDL 343 (343)
Q Consensus 328 ~~~~~~~~g~~~~~~l 343 (343)
+.+..|++|+|+|+++
T Consensus 331 ~~~~~p~gg~f~~~~l 346 (412)
T PTZ00433 331 LSPTMPRGSMFLMSRL 346 (412)
T ss_pred CcccCCCeeEEEEEEe
Confidence 8877899999999864
No 16
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=6e-48 Score=356.54 Aligned_cols=324 Identities=20% Similarity=0.307 Sum_probs=267.5
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|++++|.....++ ....+.....+.. ..+.+.++|+.|+|. +++++.+.+++.+++.......|+++.|.+
T Consensus 2 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~ 72 (385)
T PRK09276 2 MKLADRIKNLPPY--LFAEIDKKKAEKI---ARGVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGML 72 (385)
T ss_pred cchhhHhhhCCcc--HHHHHHHHHHHHH---hcCCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcH
Confidence 4566666665555 3444444332221 125678999999854 667888999999887655567899999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
+||+++++|+++.+|..++++ +|++|+|+++++..+++.++++||+|++++|+|+.|...++..|.+++.++++.++++
T Consensus 73 ~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~ 152 (385)
T PRK09276 73 EFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGF 152 (385)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCC
Confidence 999999999998888888887 5999999999999999999999999999999999999999999999999998766678
Q ss_pred CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEE
Q 019298 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL 238 (343)
Q Consensus 160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i 238 (343)
.+|++++++.+.++++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++....++..++. .+++|
T Consensus 153 ~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i 232 (385)
T PRK09276 153 LPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGI 232 (385)
T ss_pred cCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEE
Confidence 89999999888878999999999999999999999999999999999999999999999887655555544443 35789
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG 316 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~ 316 (343)
+++||||.||++|+|+||++++ +++++++++... ...+++...|.++ ..+|.+...+++ .+++++++++
T Consensus 233 ~~~S~SK~~g~~GlRiG~~i~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~ 303 (385)
T PRK09276 233 EFHSLSKTYNMTGWRIGFAVGN--------ADLIAGLGKVKSNVDSGVFQAIQEAG-IAALNGPQEVVEELRKIYQERRD 303 (385)
T ss_pred EEecchhhcCCcchhheeeeCC--------HHHHHHHHHHHhhccCCCCHHHHHHH-HHHHcCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999985 368888877654 2345566777777 566654455655 8888999999
Q ss_pred HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 317 SCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.+.|+++ |+.+..|++|+|+|+++
T Consensus 304 ~l~~~L~~~-~~~~~~~~~~~~~~v~~ 329 (385)
T PRK09276 304 ILVEGLRKL-GLEVEPPKATFYVWAPV 329 (385)
T ss_pred HHHHHHHhC-CCcccCCCcceEEEEEC
Confidence 999999998 78887899999999975
No 17
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.3e-47 Score=354.07 Aligned_cols=323 Identities=20% Similarity=0.305 Sum_probs=267.9
Q ss_pred cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL 81 (343)
Q Consensus 2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~ 81 (343)
++++|..+...+ .+..+.....+-. ..++++++|+.|+|. +++++.+.+++.+.+......+|+++.|.++
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~ 71 (383)
T TIGR03540 1 KLADRIENLPPY--LFAEIDKKKAEKK---AEGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLA 71 (383)
T ss_pred CcchhhccCChh--HHHHHHHHHHHHH---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHH
Confidence 356666665544 3333333322111 236788999999964 6678889999988876555678999999999
Q ss_pred HHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 82 TRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 82 lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
||+++++|+++.+|..++++ +|++|+|+++++..+++.++++||+|++++|+|+.+...++..|.++..++++.++++.
T Consensus 72 lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~ 151 (383)
T TIGR03540 72 YRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFL 151 (383)
T ss_pred HHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCc
Confidence 99999999998888888876 69999999999999999999999999999999999999999999999999987767788
Q ss_pred CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEE
Q 019298 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILT 239 (343)
Q Consensus 161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~ 239 (343)
+|++++++.+.++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+.+....++..++. .+++++
T Consensus 152 ~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~ 231 (383)
T TIGR03540 152 PDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIE 231 (383)
T ss_pred cCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEE
Confidence 9999999988888999999999999999999999999999999999999999999999887655555544443 357899
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGS 317 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~ 317 (343)
++||||.||++|+|+||++++ +++++++..... ...+++.+.|.++ ..++.+..++++ .++.++++++.
T Consensus 232 ~~SfSK~~g~~GlRiG~~i~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~ 302 (383)
T TIGR03540 232 FHSLSKTYNMTGWRIGMAVGN--------ADLIAGLGKVKTNVDSGVFQAIQYAA-IAALNGPQDVVKEIRKIYQRRRDL 302 (383)
T ss_pred EEecccccCCccceeeEEeCC--------HHHHHHHHHHHHhcccCCChHHHHHH-HHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999884 468888876653 2346677788887 677776566665 78899999999
Q ss_pred HHHhhcCCCCceeeCCCCceEeeecC
Q 019298 318 CVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 318 ~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+.|+++ |+.+..|++|+|+|+++
T Consensus 303 ~~~~L~~~-~~~~~~~~~~~~~~~~l 327 (383)
T TIGR03540 303 LLEALKKI-GIDVEKPKATFYVWVPV 327 (383)
T ss_pred HHHHHHhC-CCEecCCCcceEEEEEC
Confidence 99999998 88887899999999874
No 18
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=9.9e-48 Score=356.72 Aligned_cols=321 Identities=38% Similarity=0.684 Sum_probs=265.5
Q ss_pred cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP 95 (343)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 95 (343)
++.++......... .++++++|+.|.|+.+..+++++.+.+++.+.+.......|++..|.++||+++++++.+ .+
T Consensus 15 ~~~~~~~~~~~~~~---~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~-~~ 90 (401)
T TIGR01264 15 PIRAIVDNMKVKPN---PEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHN-PD 90 (401)
T ss_pred HHHHHHHHHHhhhh---cCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhh-cC
Confidence 45555554444332 246789999999864445788999999999988765566899889999999999999987 45
Q ss_pred CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCce
Q 019298 96 YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175 (343)
Q Consensus 96 ~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 175 (343)
..+++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|.+++.++++.++++++|++.+++.++++++
T Consensus 91 ~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~ 170 (401)
T TIGR01264 91 GPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTA 170 (401)
T ss_pred CCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCce
Confidence 56889999999999999999999999999999999999999999999999999999887666788999999998887889
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255 (343)
Q Consensus 176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 255 (343)
++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+....++|+++||||+|+++|+|+|
T Consensus 171 ~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG 250 (401)
T TIGR01264 171 ALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLG 250 (401)
T ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEE
Confidence 99999999999999999999999999999999999999999998876544555555554569999999999999999999
Q ss_pred EEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
|++++++.... .++++.++......++++.+.|.++ ..+|.+ ...+++ .++.++++++.+.+.|+.++|+.+..|
T Consensus 251 ~iv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p 327 (401)
T TIGR01264 251 WIIIHDRRGIL--RDIRDGLVKLSQRILGPCTIVQGAL-PSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMP 327 (401)
T ss_pred EEEecCcchhH--HHHHHHHHHHhhccCCCCcHHHHHH-HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC
Confidence 99987532111 2355555555433456788889888 666653 345665 889999999999999999888877789
Q ss_pred CCceEeeecC
Q 019298 334 TGSSLKYLDL 343 (343)
Q Consensus 334 ~~g~~~~~~l 343 (343)
++|+|+|+++
T Consensus 328 ~~g~f~~~~~ 337 (401)
T TIGR01264 328 SGAMYMMVGI 337 (401)
T ss_pred CeeeEEEEEe
Confidence 9999999974
No 19
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.2e-47 Score=355.99 Aligned_cols=324 Identities=20% Similarity=0.294 Sum_probs=264.5
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|+.|+|.....+. ....+... ....+ ..+.+.++|+.|.|+ +++++.+.+++.+.+......+|+++.|.+
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~-~~~~~--~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~ 71 (405)
T PRK09148 1 MEEFHRIRRLPPY--VFEQVNRL-KAAAR--AAGADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIP 71 (405)
T ss_pred CcchhhhhcCCcc--HHHHHHHH-HHHHH--hcCCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCH
Confidence 6677887777755 44444332 22222 236788999999864 566788888888877554567899999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
+||+++++++++++|..++++ +|++|+|++++|..+++.++++||+|++++|+|+.+...+...|.+++.++++.++.+
T Consensus 72 ~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~ 151 (405)
T PRK09148 72 GLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF 151 (405)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC
Confidence 999999999998888888887 8999999999999999999999999999999999999999999999999998765555
Q ss_pred CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEE
Q 019298 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL 238 (343)
Q Consensus 160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i 238 (343)
..++++..+....+++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++....++..++. .++++
T Consensus 152 ~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i 231 (405)
T PRK09148 152 FPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTV 231 (405)
T ss_pred ccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEE
Confidence 44555544444457889999999999999999999999999999999999999999999887644444444432 34688
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG 316 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~ 316 (343)
+++||||.|+++|+|+||++++ +++++++.+.... ..+++.+.|.++ ..+|++...+++ .++.++++++
T Consensus 232 ~~~SfSK~~~~pGlR~G~~v~~--------~~~i~~l~~~~~~~~~~~~~~~q~~~-~~~L~~~~~~~~~~~~~~~~~r~ 302 (405)
T PRK09148 232 EFTSMSKTFSMAGWRMGFAVGN--------ERLIAALTRVKSYLDYGAFTPIQVAA-TAALNGPQDCIAEMRELYKKRRD 302 (405)
T ss_pred EEeccccccCCcchheeeeeCC--------HHHHHHHHHHHHHhccCCChHHHHHH-HHHHhCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999984 4788888877643 456778889888 677776556666 7889999999
Q ss_pred HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 317 SCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.+.|+++ |+.+..|++|+|+|+++
T Consensus 303 ~l~~~L~~~-~~~~~~p~~g~f~~~~l 328 (405)
T PRK09148 303 VLVESFGRA-GWDIPPPAASMFAWAPI 328 (405)
T ss_pred HHHHHHHHc-CCccCCCCeeEEEEEEC
Confidence 999999987 78777899999999874
No 20
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.1e-47 Score=358.57 Aligned_cols=304 Identities=25% Similarity=0.374 Sum_probs=251.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.++++|++|+|..+ .+++++.+.+++.+.+......+|++..|.++||+++++|+++++|..+++++|++|+|++++|
T Consensus 31 g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al 109 (433)
T PRK06855 31 GVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAI 109 (433)
T ss_pred cccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHH
Confidence 667899999997531 4788999999999887655566899999999999999999999889999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHH-HhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCceEEEEeCCCCCccccc
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSA-AFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIINPGNPCGNVY 190 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~~~~p~nptG~~~ 190 (343)
..++. ++++||.|++++|+|+.|.... ...|.+++.++++++++|.+|+++|+++++ ++++++++++||||||.++
T Consensus 110 ~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~ 188 (433)
T PRK06855 110 AKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVY 188 (433)
T ss_pred HHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCC
Confidence 99985 7889999999999999876543 345888888888777788999999999886 3568899999999999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch-
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP- 269 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~- 269 (343)
|.+++++|+++|++||++||+||+|..+.|++..+.++..+....++|+++||||.|+++|+|+||+++++... ++
T Consensus 189 s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~---~~~ 265 (433)
T PRK06855 189 PKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADK---DEV 265 (433)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCch---hhH
Confidence 99999999999999999999999999999876555555555444468999999999999999999999854210 11
Q ss_pred --HHHHHHhhhhccccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 270 --KVVERMKKYFDILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 270 --~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+++.+........+++.+.|.++ ..++.+. ..+++ .++.++++++.+.+.|+.++|+.+..|+||+|+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~Q~a~-~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l 343 (433)
T PRK06855 266 FKKYINSILNAKMIEVCSTTLPQMAI-PRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVF 343 (433)
T ss_pred HHHHHHHHHHhhccccCCChHHHHHH-HHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeecc
Confidence 233444333323345678899988 7777653 45665 8899999999999999888888888999999999975
No 21
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-47 Score=352.77 Aligned_cols=294 Identities=23% Similarity=0.400 Sum_probs=252.1
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
.+.++|+.|.|+ +++++.+.+++.+.... ....|+++.|.++||+++++++.+++|.++++++|++|+|+++++.
T Consensus 29 ~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~ 103 (384)
T PRK06348 29 PDIIDLSLGDPD----LITDESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMY 103 (384)
T ss_pred CCcEEcCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHH
Confidence 468999999965 56667777765554443 3468999999999999999999988899999999999999999999
Q ss_pred HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
.++.+++++||+|++++|+|..+...+...|.+++.+++.+++++.+|++++++.++++++++++++||||||.++|.++
T Consensus 104 ~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~ 183 (384)
T PRK06348 104 LALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKET 183 (384)
T ss_pred HHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHH
Confidence 99999999999999999999999999999999999988766667889999999998888899999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
+++|+++|+++++++|+||+|.++.+++. ..++..+.. .+++|+++||||+|+++|+|+||+++++ ++++
T Consensus 184 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~--------~~~~ 254 (384)
T PRK06348 184 LEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPD--------YIIE 254 (384)
T ss_pred HHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcEEEEecchhccCCccccceeeecCH--------HHHH
Confidence 99999999999999999999999988653 233344432 4689999999999999999999999853 6888
Q ss_pred HHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.++..... ..+++.+.|.++ ..++.+..++++ .++.++++++.+.+.|+.++++.+..|+||+|+|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~ 325 (384)
T PRK06348 255 TAKIINEGICFSAPTISQRAA-IYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINI 325 (384)
T ss_pred HHHHHHHhccCCCCHHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEec
Confidence 88776542 457788899888 666666556665 7888999999999999988788888899999999864
No 22
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=5.9e-47 Score=351.46 Aligned_cols=323 Identities=49% Similarity=0.869 Sum_probs=270.3
Q ss_pred cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP 95 (343)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 95 (343)
++..+........ ..+.++++|+.|+|...+.+++++.+.+++.+.+.......|++..|.+++|+++++++++.++
T Consensus 15 ~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~ 91 (403)
T TIGR01265 15 PIRAIVDNLKVKP---NPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLP 91 (403)
T ss_pred HHHHHHHHHHHHH---hcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcC
Confidence 4556666555543 2367899999999875556788999999999988765556898889999999999999998778
Q ss_pred CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCce
Q 019298 96 YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175 (343)
Q Consensus 96 ~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 175 (343)
..+++++|++|+|+++++..+++++.++||+|++++|+|..+...+...|.+++.+++.+++++.+|++.+++.++++++
T Consensus 92 ~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 171 (403)
T TIGR01265 92 GKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTV 171 (403)
T ss_pred CCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCcc
Confidence 88899999999999999999999999999999999999999999999999999999886666788999999999888899
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255 (343)
Q Consensus 176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 255 (343)
++++++||||||.+++.+++++|+++|+++|+++|+|++|.++.+++....++..+....++|+++||||.|+++|+|+|
T Consensus 172 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 251 (403)
T TIGR01265 172 AIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLG 251 (403)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEE
Confidence 99999999999999999999999999999999999999999999876554555566555689999999999999999999
Q ss_pred EEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
|++++++..+. ..++++.+........+++.+.|.++ ..++.+ ...+++ .+++++++++.+.+.|+.++|+.+..|
T Consensus 252 ~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p 329 (403)
T TIGR01265 252 WIIIHDPHGIF-RDTVLQGLKNLLQRILGPATIVQGAL-PDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKP 329 (403)
T ss_pred EEEEeCchhhh-HHHHHHHHHHHhhhhcCCChHHHHHH-HHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence 99986532111 11245555555433456788999888 666643 345555 888999999999999998888887789
Q ss_pred CCceEeeecC
Q 019298 334 TGSSLKYLDL 343 (343)
Q Consensus 334 ~~g~~~~~~l 343 (343)
++|+|+|+++
T Consensus 330 ~~g~f~~~~~ 339 (403)
T TIGR01265 330 EGAMYLMVKL 339 (403)
T ss_pred CceeEEEEec
Confidence 9999999975
No 23
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.3e-47 Score=350.41 Aligned_cols=296 Identities=18% Similarity=0.275 Sum_probs=251.9
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a 112 (343)
+.++++|+.|.|. .++++.+.+++.+.+.......|+++.|.++||+++++|++++++..++++ +|++|+|++++
T Consensus 34 g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~a 109 (394)
T PRK05942 34 GLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEG 109 (394)
T ss_pred CCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHH
Confidence 6678999999865 345666777766666544456899999999999999999998888888888 48999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
|..++.+++++||+|++++|+|+.+...+...|.+++.++++.+++|.+|++++++.+.++++++++++||||||.+++.
T Consensus 110 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~ 189 (394)
T PRK05942 110 LTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPR 189 (394)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCH
Confidence 99999999999999999999999999888999999999998776778899999999888889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
+++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++|+++||||.|+++|+|+||++++ +++
T Consensus 190 ~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~--------~~l 261 (394)
T PRK05942 190 EFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN--------RHI 261 (394)
T ss_pred HHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC--------HHH
Confidence 99999999999999999999999999886654444444433 346799999999999999999999984 478
Q ss_pred HHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 272 VERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++.... ...+++...|.++ ..+|+...++++ .+++++++++.+.+.|+.+ |+.+..|++|+|+|+++
T Consensus 262 ~~~l~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~~~~ 333 (394)
T PRK05942 262 IQGLRTLKTNLDYGIFSALQKAA-ETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMYLWVPC 333 (394)
T ss_pred HHHHHHHHhhcccCCCHHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeEEEEEC
Confidence 888887654 2456777888888 667765455655 8889999999999999887 78877899999999874
No 24
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.4e-47 Score=349.46 Aligned_cols=293 Identities=21% Similarity=0.304 Sum_probs=251.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC-CCCC-cEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPN-DVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~-~i~~~~g~~~ 111 (343)
+.++++|+.|+|+ +++++.+.+++.+.+.......|++ .|.++||+++++++++.+|.. ++++ +|++|+|+++
T Consensus 43 ~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~ 117 (410)
T PRK06290 43 DMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKP 117 (410)
T ss_pred CCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHH
Confidence 5678999999964 6678889998888765444567986 899999999999999888887 8887 7999999999
Q ss_pred HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~ 191 (343)
+|..++++++++||.|++++|+|+.|...++..|.+++.++++.++++.+|++++++.+.++++++++++||||||.+++
T Consensus 118 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s 197 (410)
T PRK06290 118 ALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVAT 197 (410)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999987777889999999988878999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 270 (343)
.+++++|+++|++|++++|+||+|.++.+++. +.++..+.. .+++|+++||||.|+++|+|+||++++ ++
T Consensus 198 ~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~--------~~ 268 (410)
T PRK06290 198 KEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN--------EL 268 (410)
T ss_pred HHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCCccccEEEEeechhhcCCchhheEeEEeC--------HH
Confidence 99999999999999999999999999987653 223333332 357899999999999999999999985 46
Q ss_pred HHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 271 VVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 271 ~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++.+...... ..+++.++|.++ ..+|.+. ++++ .++.++++++.+.+.|+++ |+.+..|+||+|+|+++
T Consensus 269 l~~~l~~~~~~~~~~~~~~~q~aa-~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~l~v~l 340 (410)
T PRK06290 269 IVKAFATVKDNNDSGQFIAIQKAG-IYALDHP-EITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFYLYVKA 340 (410)
T ss_pred HHHHHHHHHhccccCCcHHHHHHH-HHHhhCc-HHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeEEEEEC
Confidence 88888776543 345566788887 7777763 5555 8899999999999999998 88887899999999864
No 25
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.2e-47 Score=350.88 Aligned_cols=321 Identities=20% Similarity=0.248 Sum_probs=257.5
Q ss_pred cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298 4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83 (343)
Q Consensus 4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 83 (343)
|++..+.+.. .+..+.....+ .+ ..+.+.++|+.|.|+ .+.++.+.+++.+........+|+++.|.++||
T Consensus 7 ~~~~~~~~~~--~~~~~~~~~~~-~~--~~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR 77 (403)
T PRK08636 7 FNKIKRLPKY--VFAEVNELKMA-AR--RAGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLR 77 (403)
T ss_pred HHHHHhCCcc--HHHHHHHHHHH-HH--hcCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHH
Confidence 3444444443 45444443322 21 236778999999865 334566667666655544467899999999999
Q ss_pred HHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298 84 RAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (343)
Q Consensus 84 ~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 162 (343)
+++|+|+++++|+.++++ +|++|+|+++++..++++++++||+|++++|+|+.+...++..|.+++.++++.++++++|
T Consensus 78 ~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 157 (403)
T PRK08636 78 LAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELD 157 (403)
T ss_pred HHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccC
Confidence 999999998889889998 7999999999999999999999999999999999999999999999999988655668899
Q ss_pred HHHH----Hhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC-
Q 019298 163 LDDI----ESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST- 234 (343)
Q Consensus 163 ~~~l----~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~- 234 (343)
++.+ +++++ .+++++++++||||||.++|.+++++|+++|++|++++|+||+|..+.+++....++..++..
T Consensus 158 ~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~ 237 (403)
T PRK08636 158 EDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAK 237 (403)
T ss_pred hhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCcc
Confidence 7754 55553 367889999999999999999999999999999999999999999998876544555555432
Q ss_pred CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHH
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLE 312 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~ 312 (343)
+++++++||||+|+++|+|+||++++ +++++++.+.... ..+++.+.|.++ ..+++....+++ .++.++
T Consensus 238 ~~~i~~~S~SK~~~~~GlRiG~iv~~--------~~li~~~~~~~~~~~~~~~~~~q~~~-~~~~~~~~~~~~~~~~~~~ 308 (403)
T PRK08636 238 DVAVESYTLSKSYNMAGWRVGFVVGN--------KKLVGALKKIKSWLDYGMFTPIQVAA-TIALDGDQSCVEEIRETYR 308 (403)
T ss_pred ccEEEEEecccccCCccceeeeeeCC--------HHHHHHHHHHHHHhcccCChHHHHHH-HHHHhCcHHHHHHHHHHHH
Confidence 46788999999999999999999885 4688888776542 345667778777 456654456665 888899
Q ss_pred HHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 313 NFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 313 ~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++.+.+.|++. |+.+..|++|+|+|+++
T Consensus 309 ~~~~~l~~~L~~~-~~~~~~p~~g~~~~~~l 338 (403)
T PRK08636 309 KRRDVLIESFANA-GWELQKPRASMFVWAKI 338 (403)
T ss_pred HHHHHHHHHHHHC-CCcccCCCcceEEEEEC
Confidence 9999999999987 78877899999999975
No 26
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=7.6e-47 Score=350.25 Aligned_cols=318 Identities=21% Similarity=0.301 Sum_probs=260.9
Q ss_pred cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298 4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83 (343)
Q Consensus 4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 83 (343)
++|..+.+++ .+..+...+.+.. +..+.++++|+.|+|+ +++++.+.+++.+.+. ....|+++.|.++||
T Consensus 2 ~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr 71 (396)
T PRK09147 2 NPRLDRLQPY--PFEKLRALFAGVT--PPADLPPISLSIGEPK----HPTPAFIKDALAANLD--GLASYPTTAGLPALR 71 (396)
T ss_pred cchhhcCCcc--hHHHHHHHHHhhh--hccCCCeEecCCCCCC----CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHH
Confidence 4566666655 5555555443321 1237899999999965 6678899999988765 356899999999999
Q ss_pred HHHHHHHhhhCCCC-CCCC-cEEEecChHHHHHHHHHHhcCC---CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298 84 RAIAEYLSRDLPYK-LTPN-DVFVTSGCTQAIDVAMALLSRP---GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG 158 (343)
Q Consensus 84 ~~ia~~~~~~~~~~-~~~~-~i~~~~g~~~al~~~~~~l~~~---gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 158 (343)
+++++++.+++|.. ++++ +|++|+|+++++..++++++++ ||.|++++|+|..|...++..|.+++.++++++++
T Consensus 72 ~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~ 151 (396)
T PRK09147 72 EAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANN 151 (396)
T ss_pred HHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCcccc
Confidence 99999999888888 8885 9999999999999999999999 89999999999999999999999999999987778
Q ss_pred CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCc-cc---ccC-
Q 019298 159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVP-MG---VFG- 232 (343)
Q Consensus 159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~-~~---~~~- 232 (343)
|.+|++++++.+.++++++++|+||||||.++|.+++++|+++|++|++++|+||+|..+.+++. ...+ +. ..+
T Consensus 152 ~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 231 (396)
T PRK09147 152 FAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGR 231 (396)
T ss_pred CccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCc
Confidence 89999999988877899999999999999999999999999999999999999999999988653 1111 11 111
Q ss_pred -CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHH
Q 019298 233 -STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGN 309 (343)
Q Consensus 233 -~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~ 309 (343)
..+++|+++||||.|+++|+|+||++++ +++++++.+.... ..+++.+.|.++ .+++.. ..+++ .++
T Consensus 232 ~~~~~vi~~~S~SK~~~~~GlRiG~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~a~-~~~~~~-~~~~~~~~~ 301 (396)
T PRK09147 232 DDFKRLVVFHSLSKRSNVPGLRSGFVAGD--------AALLKKFLLYRTYHGCAMPPAVQAAS-IAAWND-EAHVRENRA 301 (396)
T ss_pred cccccEEEEeccccccCCccceeeeecCC--------HHHHHHHHHHhhhcccCCCHHHHHHH-HHHhcc-hhHHHHHHH
Confidence 2368999999999999999999999985 3688888766542 456788888887 455544 34444 889
Q ss_pred HHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 310 FLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 310 ~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.++++++.+.+.|+.+ +.+..|++|+|+|+++
T Consensus 302 ~~~~~~~~~~~~L~~~--~~~~~p~~g~f~~~~~ 333 (396)
T PRK09147 302 LYREKFDAVTPILAPV--LDVQLPDAGFYLWAKV 333 (396)
T ss_pred HHHHHHHHHHHHHHHh--cCCCCCCeeEEEEEEC
Confidence 9999999999998874 5566899999999975
No 27
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9e-47 Score=350.16 Aligned_cols=324 Identities=20% Similarity=0.303 Sum_probs=269.6
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|++|+|....+++ ....+.....+.. ..+.++++|+.|.|. +++++.+.+++.+.+... ..+|+++.|.+
T Consensus 4 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~ 73 (402)
T PRK06107 4 FVPAARVSRIKPS--PSTAAAARARELR---AAGRSIVDLTVGEPD----FDTPDHIKQAAVAAIERG-ETKYTLVNGTP 73 (402)
T ss_pred hhhhHHhhhcCcc--HHHHHHHHHHHHH---hccCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCCH
Confidence 4566776655544 3333333332222 226688999999965 566888999999988653 35799999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
+||+++++++++.+|..+.+++|++|+|+++++..++.+++++||+|++++|+|..|...+...+...+.++++.++++.
T Consensus 74 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~ 153 (402)
T PRK06107 74 ALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFK 153 (402)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCC
Confidence 99999999999888988899999999999999999999999999999999999999998888888888888876566788
Q ss_pred CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc-CcEEEEccCCCccccCCCCCCcccccCC--CCCE
Q 019298 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-KTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPI 237 (343)
Q Consensus 161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~ 237 (343)
+|++++++.+.++++++++++|+||||.+++.+++++++++|+++ ++++|+||+|..+.|.+...+++..... .+++
T Consensus 154 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~v 233 (402)
T PRK06107 154 LTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRV 233 (402)
T ss_pred CCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCE
Confidence 999999999888889999999999999999999999999999998 9999999999999887655455444432 3589
Q ss_pred EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHH
Q 019298 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFA 315 (343)
Q Consensus 238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~ 315 (343)
++++||||.|+++|+|+||++++ ++++++++..... ..+++.+.|.++ ..+|.+...+++ .++.+++++
T Consensus 234 i~~~S~SK~~~~pGlRiG~~~~~--------~~~~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~ 304 (402)
T PRK06107 234 LVTNGVSKTYAMTGWRIGYAAGP--------ADLIAAINKLQSQSSSCPSSISQAAA-AAALNGDQSFVTESVAVYKQRR 304 (402)
T ss_pred EEEeccchhhcCcccceeeeecC--------HHHHHHHHHHHHhcccCCChHHHHHH-HHHhcCChHHHHHHHHHHHHHH
Confidence 99999999999999999999985 4688888887653 567899999999 777754455665 888899999
Q ss_pred HHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 316 GSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 316 ~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+.+.|++++|+.+..|+||+|+|+++
T Consensus 305 ~~~~~~L~~~~g~~~~~p~gg~~~~~~~ 332 (402)
T PRK06107 305 DYALALLNAIPGLSCLVPDGAFYLYVNC 332 (402)
T ss_pred HHHHHHHhcCCCCcccCCCcceEEeeec
Confidence 9999999988888888999999999874
No 28
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=8.7e-47 Score=357.09 Aligned_cols=335 Identities=21% Similarity=0.315 Sum_probs=263.0
Q ss_pred cccCccccCcCcccc-HHHHHHHHHhhcccc---ccccceeEeccCCCCCCC------------CCCC------------
Q 019298 2 EISNGGIDNTGSIIT-IKGMLSLLMQSVDDE---KNEKKVISLAMGDPTVHS------------CFHT------------ 53 (343)
Q Consensus 2 ~~s~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~i~l~~g~~~~~~------------~~~~------------ 53 (343)
.+|+|..++.++... +......+..+.... ..+..+|+|++|+|+... .+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~ 88 (481)
T PTZ00377 9 DINPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSL 88 (481)
T ss_pred ccCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCcccccc
Confidence 467788888877222 233333333211100 135799999999984100 0112
Q ss_pred -cHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEE
Q 019298 54 -THVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILL 129 (343)
Q Consensus 54 -~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~vl~ 129 (343)
+..+.+++.++++.. ....|+++.|.++||+++++++.+++|..+++++|++|+|+++++..++++++ ++||.|++
T Consensus 89 ~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv 168 (481)
T PTZ00377 89 FPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMI 168 (481)
T ss_pred CCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEE
Confidence 446667777666542 35679999999999999999999888999999999999999999999999998 79999999
Q ss_pred eCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHh
Q 019298 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETAN 203 (343)
Q Consensus 130 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 203 (343)
++|+|+.|...++..|.+++.++++++++|.+|+++|++++++ +++++++++||||||.+++.+++++|+++|+
T Consensus 169 ~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~ 248 (481)
T PTZ00377 169 PIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCY 248 (481)
T ss_pred CCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999998778899999999998864 6888999999999999999999999999999
Q ss_pred hcCcEEEEccCCCccccCC-CCCCccc----ccCCC----CCEEEEccCccc-cCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 204 KLKTLVIADEVYGHLVFGD-KPFVPMG----VFGST----VPILTLGSLSKR-WIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 204 ~~~~~~i~D~ay~~~~~~~-~~~~~~~----~~~~~----~~~i~~~S~sK~-~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
+||+++|+||+|..+.|++ ..+.++. .+... .++|+++||||+ ++++|+|+||+++.+. ++++++
T Consensus 249 ~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~-----p~~li~ 323 (481)
T PTZ00377 249 EKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNI-----PPEVRE 323 (481)
T ss_pred HCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCC-----CHHHHH
Confidence 9999999999999999853 3333332 12221 369999999997 5889999999987320 247888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhh-------HHHHH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTI-------MQIMI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~-------~~~l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
++.+......+++.++|.++ ..+|+.+ ..+.+ .++.++++++.+.+.|+.++|+.+..|+||+|+|++
T Consensus 324 ~l~~~~~~~~~~~~~~Q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~ 402 (481)
T PTZ00377 324 QIYKLASINLCSNVVGQLMT-GLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPR 402 (481)
T ss_pred HHHHHhheecCCChHHHHHH-HHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEee
Confidence 88877654557888999998 6666421 22433 444679999999999999989998899999999975
No 29
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-46 Score=346.15 Aligned_cols=318 Identities=23% Similarity=0.373 Sum_probs=266.4
Q ss_pred ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (343)
Q Consensus 3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l 82 (343)
+|++..++.++ .+..+.....+.. ..+.++++|+.|.|+ +++++.+.+++.+.+.... ..|.+..|.+++
T Consensus 5 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~l 74 (387)
T PRK08960 5 YSRRSRDIEPF--HVMALLARANELE---AAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAGH-TRYTAARGLPAL 74 (387)
T ss_pred hhhHHHhCCch--HHHHHHHHHHHHH---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHH
Confidence 56666666655 5666666554432 226678999999964 6778999999999887543 479888999999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (343)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 162 (343)
|+++++++.+++|.++++++|++|+|++++|..++.+++++||+|++++|+|+.+...+...|.+++.++++.++++.+|
T Consensus 75 r~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 154 (387)
T PRK08960 75 REAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLT 154 (387)
T ss_pred HHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCC
Confidence 99999999988898899999999999999999999999999999999999999999999999999999998766678899
Q ss_pred HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEcc
Q 019298 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS 242 (343)
Q Consensus 163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S 242 (343)
++.+++.++++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++.. .++... .+++++++|
T Consensus 155 ~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~-~~~~~~--~~~vi~~~S 231 (387)
T PRK08960 155 PALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDA-ASVLEV--DDDAFVLNS 231 (387)
T ss_pred HHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC-CChhhc--cCCEEEEee
Confidence 99999998888899999999999999999999999999999999999999999998876432 233222 358999999
Q ss_pred CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHH
Q 019298 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCV 319 (343)
Q Consensus 243 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~ 319 (343)
|||.||++|+|+||+++++ +++++++.... ...+++.+.|.++ .+++.+ ...+++ .++.++++++.+.
T Consensus 232 ~SK~~g~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~a~-~~~l~~~~~~~l~~~~~~~~~~~~~l~ 302 (387)
T PRK08960 232 FSKYFGMTGWRLGWLVAPP--------AAVPELEKLAQNLYISASTPAQHAA-LACFEPETLAILEARRAEFARRRDFLL 302 (387)
T ss_pred cccccCCcccEEEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHH-HHHhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999863 68888877654 3456788898888 666653 235555 7889999999999
Q ss_pred HhhcCCCCcee-eCCCCceEeeecC
Q 019298 320 PSYKLIPELIN-FKSTGSSLKYLDL 343 (343)
Q Consensus 320 ~~L~~~~g~~~-~~~~~g~~~~~~l 343 (343)
+.|+.+ |+.+ ..|+||+|+|+++
T Consensus 303 ~~L~~~-~~~~~~~p~g~~f~~~~~ 326 (387)
T PRK08960 303 PALREL-GFGIAVEPQGAFYLYADI 326 (387)
T ss_pred HHHHhc-CCcCCcCCCeeEEEEEec
Confidence 999987 6663 4799999999874
No 30
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=6.3e-46 Score=344.84 Aligned_cols=305 Identities=25% Similarity=0.441 Sum_probs=250.3
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
.+.++++|+.|.|+.+ ++++++.+.+++.+.+.. ...|+++.|.++||+++++++.++...++++++|++|+|++++
T Consensus 31 ~~~~~i~l~~g~p~~~-~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~ 107 (404)
T PRK09265 31 EGHKILKLNIGNPAPF-GFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSEL 107 (404)
T ss_pred cCCCeEEecCCCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHH
Confidence 4678999999998643 356788888888876653 4689999999999999999998654447899999999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
+..++++++++||+|++++|+|..+...++..|.+++.++++.++++.+|++++++.++++++++++++||||||.+++.
T Consensus 108 l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~ 187 (404)
T PRK09265 108 IVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSK 187 (404)
T ss_pred HHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCH
Confidence 99999999999999999999999999999999999988887665677899999999988889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
+++++|+++|+++|+++|+||+|.++.+++....++..+....++++++||||+|+++|+|+||++++.+..+. +.++
T Consensus 188 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~--~~~~ 265 (404)
T PRK09265 188 ELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHA--KGYI 265 (404)
T ss_pred HHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHH--HHHH
Confidence 99999999999999999999999999887655455555544457999999999999999999999975322110 1245
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhhH---HHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIM---QIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~---~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.++.......+++.++|.++ ..+|.+.. ++++.+++++++++.+.+.|+.++|+.+..|++|+|+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~ 338 (404)
T PRK09265 266 EGLDMLASMRLCANVPAQHAI-QTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKL 338 (404)
T ss_pred HHHHHHhccccCCCcHHHHHH-HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEe
Confidence 555433333457788889888 66665422 23334457888899999999988888888999999999864
No 31
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=7.9e-46 Score=341.82 Aligned_cols=294 Identities=22% Similarity=0.388 Sum_probs=253.8
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a 112 (343)
..+.++|+.|.|+ +++++.+.+++.+.+... ...|+++.|.++||+++++++++.+|...++ ++|++|+|++++
T Consensus 28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a 102 (384)
T PRK12414 28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG 102 (384)
T ss_pred hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence 4568999999964 667899999998877653 3589999999999999999999888877765 689999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
+..++++++++||+|++++|+|..+...++..|.+++.++++. +++.+|++.+++.++++++++++++||||||.+++.
T Consensus 103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~ 181 (384)
T PRK12414 103 LYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSA 181 (384)
T ss_pred HHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCH
Confidence 9999999999999999999999999999999999999998754 357899999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
+++++|+++|++|++++|+||+|..+.|++....++..+.. .+++|+++||||.|+++|+|+||++++ +++
T Consensus 182 ~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~--------~~l 253 (384)
T PRK12414 182 ADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAP--------AEL 253 (384)
T ss_pred HHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecC--------HHH
Confidence 99999999999999999999999999887654444444432 458999999999999999999999985 368
Q ss_pred HHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 272 VERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++.+.+... ...+++.+.|.++ ..+|.+...+.+.++.++++++.+.+.|+++ |+.+..|+||+|+|+++
T Consensus 254 ~~~l~~~~~~~~~~~s~~~q~a~-~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~ 324 (384)
T PRK12414 254 MDEIRKVHQFMVFSADTPMQHAF-AEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELLPSEGSFFMLARF 324 (384)
T ss_pred HHHHHHHHhheecCCCcHHHHHH-HHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCcceEEEEcc
Confidence 888887754 3557788899888 7777765556668889999999999999998 78887899999999864
No 32
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-45 Score=341.93 Aligned_cols=323 Identities=25% Similarity=0.382 Sum_probs=266.6
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|++|+|.....++ .++.+........ ..+.++++|+.|.|+ +++++.+.+++.+... ....|++..|.+
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~ 69 (397)
T PRK07568 1 MKISKRVLNMPAS--PIRKLVPYADEAK---KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIP 69 (397)
T ss_pred CchhhHhhhCCcc--hHHHHHHHHHHHH---hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCH
Confidence 6788888776655 5666654432221 114568999999954 5667888888887653 346799999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
++|+++++++. .++.++++++|++|+|+++++..++..++++||+|++++|+|..+...++..|.+++.++++.++++.
T Consensus 70 ~lr~~ia~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~ 148 (397)
T PRK07568 70 ELREAFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFH 148 (397)
T ss_pred HHHHHHHHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCC
Confidence 99999999998 47888899999999999999999999999999999999999999998889999999999886555555
Q ss_pred C-CHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEE
Q 019298 161 V-DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL 238 (343)
Q Consensus 161 ~-d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i 238 (343)
. ++++++++++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++....++..+.. .++++
T Consensus 149 ~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i 228 (397)
T PRK07568 149 LPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVI 228 (397)
T ss_pred CCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEE
Confidence 3 689999998888999999999999999999999999999999999999999999999887654445544443 56899
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGS 317 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~ 317 (343)
+++||||.|+++|+|+||+++++ +++++++.+.....++++.+.|.++ ..+|++...+++ .++.++++++.
T Consensus 229 ~~~S~SK~~~~~G~R~G~~~~~~-------~~~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~ 300 (397)
T PRK07568 229 IIDSVSKRYSACGARIGCLISKN-------KELIAAAMKLCQARLSPPTLEQIGA-AALLDTPESYFDEVREEYKKRRDI 300 (397)
T ss_pred EEecchhhccCCCcceEEEecCC-------HHHHHHHHHHhhccCCCCcHHHHHH-HHHhhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999853 3577776655433457788899888 777765455665 78889999999
Q ss_pred HHHhhcCCCCceeeCCCCceEeeecC
Q 019298 318 CVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 318 ~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+.|++++|+.+..|+||+|+|+++
T Consensus 301 l~~~L~~~~~~~~~~p~g~~~~~~~l 326 (397)
T PRK07568 301 LYEELNKIPGVVCEKPKGAFYIIAKL 326 (397)
T ss_pred HHHHHhcCCCceecCCCcceEEEEec
Confidence 99999998888887899999999875
No 33
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.3e-46 Score=349.91 Aligned_cols=302 Identities=23% Similarity=0.333 Sum_probs=246.1
Q ss_pred hccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298 27 SVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-----------EKFNGYAPTAGLPLTRRAIAEYLSRDLP 95 (343)
Q Consensus 27 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 95 (343)
.++.+.++.+.|+|+++++. +.. +.+.+.++..... ..+..|+++.|.++||+++|+|+.++++
T Consensus 30 ~y~~~~~p~g~i~L~~~En~----l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~ 104 (468)
T PLN02450 30 PYDEIKNPSGIIQMGLAENQ----LSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRG 104 (468)
T ss_pred CCCcccCCCeeEEeehhHhH----hhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhC
Confidence 45554557789999999942 333 5556655543210 1345699989999999999999998777
Q ss_pred C--CCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH-hcCceeEEeecCCCCCCCCCHHHHHhhhcC
Q 019298 96 Y--KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172 (343)
Q Consensus 96 ~--~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~ 172 (343)
. .+++++|++|+|++++|..++.+++++||.|++++|+|+.|...+. ..|.+++.++++.++++.+|++++++++.+
T Consensus 105 ~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 105 NKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred CCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHH
Confidence 4 4789999999999999999999999999999999999999988777 589999999987677888999999987753
Q ss_pred ------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc---------CCCCCE
Q 019298 173 ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---------GSTVPI 237 (343)
Q Consensus 173 ------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~---------~~~~~~ 237 (343)
++++++++|||||||.+++.+++++|+++|++|++++|+||+|+.+.|++..+.++... +..+++
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~v 264 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRV 264 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcE
Confidence 68899999999999999999999999999999999999999999988876443332211 134689
Q ss_pred EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhH---HHHH-HHHHHHH
Q 019298 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIM---QIMI-HGNFLEN 313 (343)
Q Consensus 238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~---~~l~-~~~~~~~ 313 (343)
++++||||.|+++|+|+||+++++ +.+++.+.+... ...++.+.|.++ ..+|.+.. ++++ .++++++
T Consensus 265 i~l~S~SK~~~l~GlRiG~li~~~-------~~l~~~~~~~~~-~~~~s~~~Q~a~-~~~L~~~~~~~~~l~~~~~~l~~ 335 (468)
T PLN02450 265 HIVYSLSKDLGLPGFRVGAIYSND-------EMVVSAATKMSS-FGLVSSQTQYLL-SALLSDKKFTKNYLEENQKRLKQ 335 (468)
T ss_pred EEEEeccccCCCCCccEEEEEECC-------HHHHHHHHHHhh-cCCCCHHHHHHH-HHHhCCchhHHHHHHHHHHHHHH
Confidence 999999999999999999999964 235666655543 345688889988 77777632 3444 8899999
Q ss_pred HHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 314 FAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 314 ~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus 336 rr~~l~~~L~~~-gi~~~~~~~g~flwi~l 364 (468)
T PLN02450 336 RQKKLVSGLEAA-GIKCLKSNAGLFCWVDM 364 (468)
T ss_pred HHHHHHHHHHHc-CCcccCCCceEEEEEEc
Confidence 999999999998 88888899999999975
No 34
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1.5e-45 Score=340.80 Aligned_cols=320 Identities=21% Similarity=0.351 Sum_probs=263.0
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|.+|+|......+ .+..+.....+-. ..+...++|+.|.|+ +++++.+.+++.+.+... ...|++..|.+
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~ 70 (388)
T PRK07337 1 MRLAARVDAIEPF--YVMELAKEAQALE---RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLA 70 (388)
T ss_pred CchhhHhHhcCch--HHHHHHHHHHHHH---hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence 5677777665544 3444443333221 236788999999965 566788899998887643 45799988999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
+||+++++|+++++|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++++.++++.
T Consensus 71 ~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 150 (388)
T PRK07337 71 PLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQ 150 (388)
T ss_pred HHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCc
Confidence 99999999999888988999999999999999999999999999999999999999999899999999999987667789
Q ss_pred CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (343)
Q Consensus 161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (343)
+|++++++.++++++++++++||||||.+++.+++++|+++|+++++++|+||+|..+.+.+.. .+.... .++++++
T Consensus 151 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~--~~~vi~~ 227 (388)
T PRK07337 151 LTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAP-VSALSL--GDDVITI 227 (388)
T ss_pred CCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC-cChhhc--cCCEEEE
Confidence 9999999999888999999999999999999999999999999999999999999998876542 222222 3578999
Q ss_pred ccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-h-HHHHHHHHHHHHHHHH
Q 019298 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-I-MQIMIHGNFLENFAGS 317 (343)
Q Consensus 241 ~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-~-~~~l~~~~~~~~~~~~ 317 (343)
+||||.|+++|+|+||++++ +++++++..... ...+++.+.|.++ ..++.+ . ..+.+.++.++++++.
T Consensus 228 ~S~SK~~~~~G~RiG~~~~~--------~~l~~~l~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~r~~ 298 (388)
T PRK07337 228 NSFSKYFNMTGWRLGWLVVP--------EALVGTFEKLAQNLFICASALAQHAA-LACFEPDTLAIYERRRAEFKRRRDF 298 (388)
T ss_pred EechhhcCCchhheeeeecC--------HHHHHHHHHHHHHhccCCChHHHHHH-HHHhccCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999985 368888877653 3446788888887 555653 1 2333488899999999
Q ss_pred HHHhhcCCCCcee-eCCCCceEeeecC
Q 019298 318 CVPSYKLIPELIN-FKSTGSSLKYLDL 343 (343)
Q Consensus 318 ~~~~L~~~~g~~~-~~~~~g~~~~~~l 343 (343)
+.+.|+++ |+.+ ..|++|+|+|+++
T Consensus 299 ~~~~L~~~-~~~~~~~p~~g~f~~~~~ 324 (388)
T PRK07337 299 IVPALESL-GFKVPVMPDGAFYVYADC 324 (388)
T ss_pred HHHHHHhc-CCccccCCCeeEEEEEec
Confidence 99999987 6663 4789999999975
No 35
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.4e-45 Score=342.11 Aligned_cols=326 Identities=28% Similarity=0.434 Sum_probs=262.1
Q ss_pred cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL 81 (343)
Q Consensus 2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~ 81 (343)
.+|++..+.++ .+..+.....+.. ..+.++|+|+.|.|.. ..+++++.+.+++.+.+... ...|+++.|.++
T Consensus 3 ~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~-~~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~ 74 (398)
T PRK08363 3 RASERAMGVEY---AIRDVVLPARELE---KKGIKVIRLNIGDPVK-FDFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPE 74 (398)
T ss_pred chhHHHHhccH---HHHHHHHHHHHHH---hcCCCeEEEeCCCCCc-CCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHH
Confidence 45556655542 2344433333321 2367899999999852 13678899999999887653 357988899999
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCC
Q 019298 82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV 161 (343)
Q Consensus 82 lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 161 (343)
||+++++++++.+|+++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++...++++.+
T Consensus 75 lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~ 154 (398)
T PRK08363 75 LREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQP 154 (398)
T ss_pred HHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcC
Confidence 99999999998889899999999999999999999999999999999999999999999999999888874333456789
Q ss_pred CHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEc
Q 019298 162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG 241 (343)
Q Consensus 162 d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~ 241 (343)
|++.+++.++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+.+. ..++..+....++++++
T Consensus 155 d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~ 233 (398)
T PRK08363 155 DIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMN 233 (398)
T ss_pred CHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEe
Confidence 99999999888889999999999999999999999999999999999999999999887653 23344455556899999
Q ss_pred cCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298 242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG 316 (343)
Q Consensus 242 S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~ 316 (343)
||||.|+++|+|+||+++.++ +++++.++.. .....+++.+.|.++ ..+|.+..++++ .+++++++++
T Consensus 234 SfSK~~~~~GlRiG~~~~~~~------~~~~~~l~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~l~~~~~~~~~~~~ 306 (398)
T PRK08363 234 GLSKVYFATGWRLGYIYFVDP------EGKLAEVREAIDKLARIRLCPNTPAQFAA-IAGLTGPMDYLEEYMKKLKERRD 306 (398)
T ss_pred cchhccCCccceEEEEEEeCc------HHHHHHHHHHHHHHhcccccCChHHHHHH-HHHHhCChHHHHHHHHHHHHHHH
Confidence 999999999999999998321 2345544433 222356788889888 666665456665 8899999999
Q ss_pred HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 317 SCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.+.|+.++++.+..|+||+|+|+++
T Consensus 307 ~l~~~L~~~~~~~~~~p~g~~~~~~~l 333 (398)
T PRK08363 307 YIYKRLNEIPGISTTKPQGAFYIFPRI 333 (398)
T ss_pred HHHHHHhcCCCCEecCCCeEEEEEEEe
Confidence 999999988888887899999999753
No 36
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=3e-46 Score=346.09 Aligned_cols=328 Identities=19% Similarity=0.200 Sum_probs=249.6
Q ss_pred CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298 5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 83 (343)
+|....+++ .+..+...+.... .+++|||+.|.|.. ...++..+.+.+++++..+.....+|++..|.++||
T Consensus 3 ~~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR 75 (396)
T PRK09257 3 EHLEAAPAD--PILGLMEAFRADP-----RPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYR 75 (396)
T ss_pred ccCCCCCCC--hHHHHHHHHhhCC-----CcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHH
Confidence 445566665 5666665554433 35789999997521 111222478889888877655556899999999999
Q ss_pred HHHHHHHhhhCCCCCCCCcE--EEecChHHHHHHHHHHh--cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 84 RAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALL--SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 84 ~~ia~~~~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
+++++|+.+..+..+++++| ++|+|+++++..+++.+ +++||+|++++|+|+.|...++..|++++.+++..++++
T Consensus 76 ~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~ 155 (396)
T PRK09257 76 QAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATK 155 (396)
T ss_pred HHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccC
Confidence 99999997655545688887 99999999999998776 489999999999999999999999999999988444567
Q ss_pred CCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC-CCCCCcccccC-CC
Q 019298 160 EVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVFG-ST 234 (343)
Q Consensus 160 ~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~-~~~~~~~~~~~-~~ 234 (343)
++|++.+++.++. ++.++++++||||||.++|.+++++|+++|++||+++|+||+|.++.++ +....++..+. ..
T Consensus 156 ~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~ 235 (396)
T PRK09257 156 GLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAG 235 (396)
T ss_pred ccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcC
Confidence 8999999988752 3455666999999999999999999999999999999999999998875 22233333333 23
Q ss_pred CCEEEEccCccccCCCCCcEEEEEE--eCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhh------HHHH
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVT--TDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTI------MQIM 305 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~------~~~l 305 (343)
+++|+++||||+|+++|+|+||+++ +++..+ ..++.+++... ....+++.+.|.++ ..+|.+. .+++
T Consensus 236 ~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~ 311 (396)
T PRK09257 236 LELLVASSFSKNFGLYGERVGALSVVAEDAEEA---DRVLSQLKATIRTNYSNPPAHGAAIV-ATILNDPELRAEWEAEL 311 (396)
T ss_pred CcEEEEEEcCCcCccccccceeEEEEeCCHHHH---HHHHHHHHHHhhhhcCCCcHHHHHHH-HHHhCCHHHHHHHHHHH
Confidence 5899999999999999999999984 221100 02334444433 23455688888877 6666653 2233
Q ss_pred H-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298 306 I-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 306 ~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l 343 (343)
+ .+++++++++.+.+.|+++. ++.+..|+||+|+|+++
T Consensus 312 ~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l 353 (396)
T PRK09257 312 EEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGL 353 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCC
Confidence 3 88999999999999998862 36677899999999975
No 37
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=7.5e-46 Score=345.74 Aligned_cols=327 Identities=18% Similarity=0.269 Sum_probs=261.0
Q ss_pred cccCccccCcCc-cccHHHHHHHHH-hhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-----------C
Q 019298 2 EISNGGIDNTGS-IITIKGMLSLLM-QSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-----------E 68 (343)
Q Consensus 2 ~~s~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 68 (343)
.+|+|+...... ..+.......+. +..++..++.++|+|++++. ......+.+.+++.... .
T Consensus 12 ~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN-----~l~~d~l~~~~~~~~~~~~~~~~~~~~~~ 86 (447)
T PLN02607 12 GLSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAEN-----QVSFDLLEEYLKQHPEASSWGGKGAPGFR 86 (447)
T ss_pred hhhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhh-----hhhHHHHHHHHHhCchhhccccccccccc
Confidence 567777666632 113333332233 33555577889999999982 34567777777664320 1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhhhCC--CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH-hcC
Q 019298 69 KFNGYAPTAGLPLTRRAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRH 145 (343)
Q Consensus 69 ~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-~~g 145 (343)
....|.+..|.+.||+++|+|+++.++ .++++++|++|+|+++++..++.+++++||.|++++|+|+.+...+. ..|
T Consensus 87 ~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g 166 (447)
T PLN02607 87 ENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG 166 (447)
T ss_pred hhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCC
Confidence 234588889999999999999998776 36899999999999999999999999999999999999999987776 478
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+++.++++.+++|.+|++++++++++ ++++++++|||||||.+++++++++|+++|++|++++|+||+|+.++
T Consensus 167 ~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~ 246 (447)
T PLN02607 167 VKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSV 246 (447)
T ss_pred cEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 999999987777788999999998763 67899999999999999999999999999999999999999999998
Q ss_pred cCCCCCCccccc----C--C-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHH
Q 019298 220 FGDKPFVPMGVF----G--S-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVC 292 (343)
Q Consensus 220 ~~~~~~~~~~~~----~--~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a 292 (343)
|++.++.++..+ + . .+++++++||||.||++|+|+||+++.+ +++++.++.... +..++.+.|.+
T Consensus 247 f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n-------~~l~~~~~~~~~-~~~~s~~~q~~ 318 (447)
T PLN02607 247 FSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYN-------DKVVTTARRMSS-FTLVSSQTQHL 318 (447)
T ss_pred cCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcC-------HHHHHHHHHHhh-cCCCCHHHHHH
Confidence 876555554332 1 1 4689999999999999999999999843 457777765543 34567788888
Q ss_pred HHhccchhh---HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 293 IMYGCLSTI---MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 293 ~~~~~l~~~---~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+ ..+|++. .++++ .+++++++++.+.+.|++. |+.+..+++|+|+|++|
T Consensus 319 ~-~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~fvw~~L 371 (447)
T PLN02607 319 L-ASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGLFCWMNL 371 (447)
T ss_pred H-HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEEEEEEc
Confidence 8 7777763 23443 7889999999999999998 88888899999999986
No 38
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-45 Score=338.05 Aligned_cols=319 Identities=22% Similarity=0.297 Sum_probs=262.9
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|++++|.....++ +........+. ..+.++|+.|.|+ +++++.+.+++++.+.......|++..|.+
T Consensus 2 ~~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~ 68 (389)
T PRK05957 2 TQFTSRMDAVQSP---IIPVVGQLIRE------NPGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIP 68 (389)
T ss_pred chhhHHHHhcCCc---HHHHHHHHHHh------CCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCH
Confidence 5677777555544 33333322222 2467999999964 678899999999887655556899999999
Q ss_pred HHHHHHHHHHhhhCCCCCC-CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
++|+++++++.+.+|..++ +++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++.+ +++
T Consensus 69 ~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~ 146 (389)
T PRK05957 69 PLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNY 146 (389)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCC
Confidence 9999999999988887777 7899999999999999999999999999999999999988888899999998874 457
Q ss_pred CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc-CCCCCEE
Q 019298 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238 (343)
Q Consensus 160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~-~~~~~~i 238 (343)
.+|+++++++++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....+.... +...++|
T Consensus 147 ~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i 226 (389)
T PRK05957 147 QLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTI 226 (389)
T ss_pred CcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEE
Confidence 899999999998889999999999999999999999999999999999999999999998875432232222 4446899
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG 316 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~ 316 (343)
+++||||.|+++|+|+||++++ +++++++...... ..+++.+.|.++ ..+|.+...+++ .++.++++++
T Consensus 227 ~~~S~SK~~g~~GlRiG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~r~ 297 (389)
T PRK05957 227 SLYSLSKAYGFASWRIGYMVIP--------IHLLEAIKKIQDTILICPPVVSQYAA-LGALQVGKSYCQQHLPEIAQVRQ 297 (389)
T ss_pred EEecchhhccCccceeEEEecC--------HHHHHHHHHHHhhcccCCCcHHHHHH-HHHHhCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999985 3688888877643 446677888888 666765445555 7788999999
Q ss_pred HHHHhhcCCCCc-eeeCCCCceEeeecC
Q 019298 317 SCVPSYKLIPEL-INFKSTGSSLKYLDL 343 (343)
Q Consensus 317 ~~~~~L~~~~g~-~~~~~~~g~~~~~~l 343 (343)
.+.+.|+.++++ .+..|+||+|+|+++
T Consensus 298 ~l~~~L~~~~~~~~~~~~~gg~~~~~~~ 325 (389)
T PRK05957 298 ILLKSLGQLQDRCTLHPANGAFYCFLKV 325 (389)
T ss_pred HHHHHHHhcCCCccccCCCeeEEEEEeC
Confidence 999999988775 677899999999874
No 39
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=5.2e-45 Score=336.98 Aligned_cols=322 Identities=22% Similarity=0.253 Sum_probs=268.6
Q ss_pred ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (343)
Q Consensus 3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l 82 (343)
+++|..+..+. .++.+...+.... ..+.+.++|+.|.|+ .++++.+.+++.+.+.......|++..|.++|
T Consensus 2 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~l 72 (386)
T PRK07550 2 LNPLIAALFPP--PIPEVRAWLAGYD---GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPEL 72 (386)
T ss_pred cchhhhhcCCh--HHHHHHHHHHHHh---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHH
Confidence 56677776655 6777777654443 236778999999965 55678899999888765556789888999999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (343)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 162 (343)
|+++++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.+++++++++.+|
T Consensus 73 r~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 152 (386)
T PRK07550 73 REAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPD 152 (386)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCC
Confidence 99999999988898899999999999999999999999999999999999999999999999999999998766778899
Q ss_pred HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc-CCCCCEEEEc
Q 019298 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLG 241 (343)
Q Consensus 163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~~~ 241 (343)
.+++++.++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....+.... +..+++++++
T Consensus 153 ~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~ 232 (386)
T PRK07550 153 PAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLY 232 (386)
T ss_pred HHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEe
Confidence 999999998889999999999999999999999999999999999999999999987654332222222 2345899999
Q ss_pred cCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHH
Q 019298 242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCV 319 (343)
Q Consensus 242 S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~ 319 (343)
||||.|+++|+|+||+++++ +++++++.... ...+++.+.|.++ ..++.+..++++ .++.++++++.+.
T Consensus 233 S~SK~~g~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~ 303 (386)
T PRK07550 233 SFSKSYALTGHRVGAVVASP--------ARIAEIEKFMDTVAICAPRIGQIAV-AWGLPNLADWRAGNRAEIARRRDAFR 303 (386)
T ss_pred cchhhccCcccceEeeecCH--------HHHHHHHHHHhhcccCCCcHHHHHH-HHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999853 67777776654 3456788888888 677766556665 7888999999999
Q ss_pred HhhcCCCCceeeCCCCceEeeecC
Q 019298 320 PSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 320 ~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.|..++++.+ .+++|+|+|+++
T Consensus 304 ~~L~~~~~~~~-~~~g~~~~~~~~ 326 (386)
T PRK07550 304 AVFARLPGWEL-LASGAYFAYVRH 326 (386)
T ss_pred HHHHhCCCcee-CCCceEEEEecC
Confidence 99988767655 578999999864
No 40
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-45 Score=340.55 Aligned_cols=295 Identities=26% Similarity=0.447 Sum_probs=253.6
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
..+.++|+.|+|. +++++.+.+++++++... ...|.+..|.++||+++++++.+.+|.++++++|++|+|+++++
T Consensus 32 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 106 (391)
T PRK08361 32 MENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEAT 106 (391)
T ss_pred hcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHH
Confidence 3568999999965 566789999999887654 45798889999999999999988888889999999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++.+++++||+|++++|+|..+...+...|.+++.++++.++++.+|++++++.++++++++++++|+||||.+++.+
T Consensus 107 ~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~ 186 (391)
T PRK08361 107 YLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKE 186 (391)
T ss_pred HHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHH
Confidence 99999999999999999999999999999999999999988776788999999999988899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++++|+++|+++++++|+||+|.++.+++....++.... .+++++++||||+|+++|+|+||++++ +++++
T Consensus 187 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~~~~GlRiG~~~~~--------~~~~~ 257 (391)
T PRK08361 187 VAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTILANSFSKTFAMTGWRLGFVIAP--------EQVIK 257 (391)
T ss_pred HHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEEEEecCchhcCCcHhhhhhhccC--------HHHHH
Confidence 999999999999999999999999987654433433332 257999999999999999999999985 36777
Q ss_pred HHhhhhc-cccCcchHHHHHHHhccchhhH--HHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFD-ILGDPATFIQVCIMYGCLSTIM--QIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~--~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++..... ..++++.+.|.++ ..+|.+.. ++++ .++.++++++.+.+.|+.++|+.+..|+||+|+|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l 330 (391)
T PRK08361 258 DMIKLHAYIIGNVASFVQIAG-IEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANI 330 (391)
T ss_pred HHHHHHhhhccCCChHHHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEEC
Confidence 7776653 2457788888888 66666533 2344 8888999999999999998888888999999999864
No 41
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-45 Score=338.76 Aligned_cols=324 Identities=27% Similarity=0.397 Sum_probs=272.8
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|++|+|..+..++ ++..+.....+.. ..+.+.++|+.|+|. +++++.+.+++.+.+.+.. ..|++..|.+
T Consensus 2 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~ 71 (393)
T PRK05764 2 MKLSKRVSRVTPS--ATLAVTAKAKELK---AQGRDVISLGAGEPD----FDTPEHIKEAAIEALDDGK-TKYTPAAGIP 71 (393)
T ss_pred cchhhhhhhcCch--HHHHHHHHHHHHH---hccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CCcCCCCChH
Confidence 6789999998877 6666555544322 235788999999965 5677899999988876543 4699989999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
.||+++++++.+.+|..+++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.+++.++.++++++.
T Consensus 72 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 151 (393)
T PRK05764 72 ELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFK 151 (393)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCc
Confidence 99999999998888888899999999999999999999999999999999999999999999999999999987667788
Q ss_pred CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc--CCCCCEE
Q 019298 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF--GSTVPIL 238 (343)
Q Consensus 161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~--~~~~~~i 238 (343)
+|++.+++.++++++++++++|+||||.+++.+++++|+++|++|++++|+||+|+.+.+++....++..+ +..++++
T Consensus 152 ~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i 231 (393)
T PRK05764 152 LTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTI 231 (393)
T ss_pred CCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEE
Confidence 99999999998888999999999999999999999999999999999999999999998865443344333 2345899
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG 316 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~ 316 (343)
+++||||.++++|+|+||++++ ++++++++.... ...+++++.|.++ ..+|.....+++ .++.++++++
T Consensus 232 ~~~s~SK~~~~~G~RiG~i~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~ 302 (393)
T PRK05764 232 TVNGFSKAYAMTGWRLGYAAGP--------KELIKAMSKLQSHSTSNPTSIAQYAA-VAALNGPQDEVEEMRQAFEERRD 302 (393)
T ss_pred EEecCcccccCccceeEEEecC--------HHHHHHHHHHHhhcccCCChHHHHHH-HHHHcCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999974 468888877654 3457788888887 566653245554 7888999999
Q ss_pred HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 317 SCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.+.|++++|+.+..|+||+|+|+++
T Consensus 303 ~l~~~L~~~~g~~~~~~~g~~~~~~~~ 329 (393)
T PRK05764 303 LMVDGLNEIPGLECPKPEGAFYVFPNV 329 (393)
T ss_pred HHHHHHhhCCCCcccCCCcceEEEEec
Confidence 999999998888887899999999864
No 42
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=3.1e-45 Score=339.11 Aligned_cols=308 Identities=23% Similarity=0.347 Sum_probs=253.0
Q ss_pred cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP 95 (343)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 95 (343)
.+..+...+.+... ..+.+.++|+.|+|. +++++.+++++++.+. ....|+++.|.++||+++|+|+.+.++
T Consensus 11 ~~~~~~~~~~~~~~--~~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~ 82 (393)
T TIGR03538 11 PFEKLAALLAGVTP--PASKPPIALSIGEPK----HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIARWLERRFD 82 (393)
T ss_pred HHHHHHHHHHhhhh--hcCCCeEEecCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHhhC
Confidence 45555444432211 126889999999964 6778999999998765 356899999999999999999998878
Q ss_pred CC--CCCC-cEEEecChHHHHHHHHHHhcCCCCe--EEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 96 YK--LTPN-DVFVTSGCTQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 96 ~~--~~~~-~i~~~~g~~~al~~~~~~l~~~gd~--vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
.+ ++++ +|++|+|+++++..++++++++||. |++++|+|..|...++..|.+++.+++++++++.+|++++++.+
T Consensus 83 ~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~ 162 (393)
T TIGR03538 83 LPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESV 162 (393)
T ss_pred CcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHH
Confidence 75 7885 8999999999999999999999986 99999999999999999999999999977777889999999988
Q ss_pred cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCc-ccc---c--CCCCCEEEEccC
Q 019298 171 DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVP-MGV---F--GSTVPILTLGSL 243 (343)
Q Consensus 171 ~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~-~~~---~--~~~~~~i~~~S~ 243 (343)
.++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++. ...+ +.. . ...+++|+++||
T Consensus 163 ~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 242 (393)
T TIGR03538 163 WRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSL 242 (393)
T ss_pred hhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecc
Confidence 77899999999999999999999999999999999999999999999887642 2222 111 1 134689999999
Q ss_pred ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHh
Q 019298 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPS 321 (343)
Q Consensus 244 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~ 321 (343)
||.|+++|+|+||++++ +++++++.+.... ..+++.+.|.++ ...+.+ .++++ .++.++++++.+.+.
T Consensus 243 SK~~~~~GlRvG~~i~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~-~~~~~~~~~~~~~~~~~~~~~ 312 (393)
T TIGR03538 243 SKRSNLPGLRSGFVAGD--------AEILKAFLRYRTYHGCAMPIPTQLAS-IAAWND-EQHVRENRALYREKFAAVLEI 312 (393)
T ss_pred hhhcCCcccceEEEecC--------HHHHHHHHHHHHhhccCcCHHHHHHH-HHHhcC-hHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999985 3688888776542 446778888887 455554 34554 888999999999999
Q ss_pred hcCCCCceeeCCCCceEeeecC
Q 019298 322 YKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 322 L~~~~g~~~~~~~~g~~~~~~l 343 (343)
|+.+ +.+..|++|+|+|+++
T Consensus 313 L~~~--~~~~~p~gg~f~~~~~ 332 (393)
T TIGR03538 313 LGQV--LDLELPDAGFYLWPKV 332 (393)
T ss_pred HHhh--CcccCCCeeEEEEEEC
Confidence 9874 4556899999999975
No 43
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-45 Score=316.12 Aligned_cols=295 Identities=21% Similarity=0.350 Sum_probs=264.3
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
...++.|.+.+. .++.+|.+.+++++..+++.+ +|+ .+.+++.+++++|+++++++.+.++.|++++|...++
T Consensus 24 ~~DvlPmWVADM----Df~~pp~i~~Al~~rvdhGvf-GY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi 96 (388)
T COG1168 24 NEDVLPMWVADM----DFPTPPEIIEALRERVDHGVF-GYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI 96 (388)
T ss_pred CCCcceeeeecc----cCCCCHHHHHHHHHHHhcCCC-CCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhH
Confidence 368999999994 599999999999999987654 787 5678999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC-CCCCCCCHHHHHhhhcCC-ceEEEEeCCCCCcccccC
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLADQN-TVALVIINPGNPCGNVYS 191 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~~~~-~~~i~~~~p~nptG~~~~ 191 (343)
..+++.++++||.|++..|.|+++....+..|.++...|+.. ++.|.+|+++||+++.+. .++.++||||||||.+++
T Consensus 97 ~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt 176 (388)
T COG1168 97 SLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWT 176 (388)
T ss_pred HHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCcccc
Confidence 999999999999999999999999999999999999999874 455888999999988764 589999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC--CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST--VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~--~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~ 269 (343)
+++|++|.++|++||+.||+||.|+++++.+..+.++..++.. ++.|.|.|.||+|.++|+++++++.+| +
T Consensus 177 ~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n-------~ 249 (388)
T COG1168 177 KEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISN-------R 249 (388)
T ss_pred HHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecC-------H
Confidence 9999999999999999999999999999999777777666554 689999999999999999999999986 3
Q ss_pred HHHHHHhhh-h-ccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298 270 KVVERMKKY-F-DILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 270 ~~~~~l~~~-~-~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l 343 (343)
++.++..+. . .....+|.++..|. .++++....|++ +.+.++.+++.+.+.|++ +|++.+..|+|++.+|+|+
T Consensus 250 ~lr~~~~~~l~~~~~~~~n~lg~~A~-~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~ 326 (388)
T COG1168 250 ELRAKFLKRLKRNGLHGPSALGIIAT-EAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDC 326 (388)
T ss_pred HHHHHHHHHHHHhcCCCCchHHHHHH-HHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeec
Confidence 454444333 2 23568899998888 899999999998 999999999999999987 7999999999999999986
No 44
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-45 Score=336.41 Aligned_cols=296 Identities=25% Similarity=0.376 Sum_probs=254.1
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
..++++|+.|+|+ +++++.+.+++++.+.+.. ..|+++.|.++||+++++++.+.+|..+++++|++|+|+++++
T Consensus 23 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al 97 (382)
T PRK06108 23 REGVLPLWFGESD----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQAL 97 (382)
T ss_pred cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHH
Confidence 3468999999964 7778999999999887643 4699999999999999999998888889999999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
..++..++++||.|++++|+|..+...++..|.+++.++++.+ ++|.+|++++++.++++++++++++||||||.+++.
T Consensus 98 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~ 177 (382)
T PRK06108 98 MLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASR 177 (382)
T ss_pred HHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCH
Confidence 9999999999999999999999999999999999999998753 467899999999888788999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccC-CCCCCccccc-CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~-~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 270 (343)
+++++|+++|+++|+++|+||+|.++.++ +....++..+ ...+++++++||||.|+++|+|+||++++ ++
T Consensus 178 ~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~--------~~ 249 (382)
T PRK06108 178 DDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAP--------PA 249 (382)
T ss_pred HHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCC--------HH
Confidence 99999999999999999999999999886 3333333333 23468999999999999999999999985 36
Q ss_pred HHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 271 VVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 271 ~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++..... ...+++.+.|.++ ..+|.+...+++ .+++++++++.+.+.|++++|+.+..|++|+|+|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l 323 (382)
T PRK06108 250 LGQVLEKLIEYNTSCVAQFVQRAA-VAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRI 323 (382)
T ss_pred HHHHHHHHHHhcccCCChHHHHHH-HHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeC
Confidence 8888876643 2456788888888 677766455555 8888999999999999988888887899999999874
No 45
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=1.9e-45 Score=339.04 Aligned_cols=293 Identities=25% Similarity=0.409 Sum_probs=251.5
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI 113 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al 113 (343)
.+.|+|+.|+|+ +++++.+.+++.+.+.. ....|++..|.+++|+++++++++++|..++++ +|++|+|+++++
T Consensus 20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 94 (378)
T PRK07682 20 EGVISLGVGEPD----FVTPWNVREASIRSLEQ-GYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL 94 (378)
T ss_pred CCeEEeCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 468999999965 55677788888887764 356799889999999999999998888888886 899999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++++++++||+|++++|+|+.|...++..|.+++.++++.++++.+|++++++++.++++++++++||||||.+++.+
T Consensus 95 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~ 174 (378)
T PRK07682 95 DVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKS 174 (378)
T ss_pred HHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHH
Confidence 99999999999999999999999999999999999999887666788999999999888899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
++++|+++|++|++++|+||+|.++.+++. ..++..+.. .+++++++||||.|+++|+|+||++++ ++++
T Consensus 175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~--------~~~i 245 (378)
T PRK07682 175 ELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP--------VYFS 245 (378)
T ss_pred HHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcC--------HHHH
Confidence 999999999999999999999999998753 223333332 368999999999999999999999985 3688
Q ss_pred HHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++...... ..+++.+.|.++ ..+|.+...+++ .++.++++++.+.+.|+++ |+.+..|+||+|+|+++
T Consensus 246 ~~l~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~ 316 (378)
T PRK07682 246 EAMLKIHQYSMMCAPTMAQFAA-LEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAFYAFPSI 316 (378)
T ss_pred HHHHHHHHhhccCCCHHHHHHH-HHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCeeEEEEEec
Confidence 888776542 456788889888 677765444454 8888999999999999998 88888899999999853
No 46
>PLN02231 alanine transaminase
Probab=100.00 E-value=1e-44 Score=343.56 Aligned_cols=297 Identities=23% Similarity=0.311 Sum_probs=242.1
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc--C-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--E-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
.+..|+|+.+.+ .++. .+++...+.+.+ + ....|+++.|.++||++|++|+.+++|..+++++|++|+|++
T Consensus 128 ~p~~i~~~~~~~----~fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~ 201 (534)
T PLN02231 128 HPSLLDKSETHG----LFSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGAS 201 (534)
T ss_pred CCccCCCCCccc----cCCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHH
Confidence 346788875542 2332 444444455543 2 467899999999999999999999889999999999999999
Q ss_pred HHHHHHHHHhc-CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCC
Q 019298 111 QAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPG 183 (343)
Q Consensus 111 ~al~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~ 183 (343)
+++..++++++ .+||.|+++.|+|+.|...+...|.+++.++++++++|++|+++|++++++ ++++++++|||
T Consensus 202 ~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~ 281 (534)
T PLN02231 202 PAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPG 281 (534)
T ss_pred HHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCC
Confidence 99999999998 479999999999999999999999999999998777899999999998864 57889999999
Q ss_pred CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC-CCCCCcccccC-------CCCCEEEEccCcccc-CCCCCcE
Q 019298 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVFG-------STVPILTLGSLSKRW-IVPGWRL 254 (343)
Q Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~-~~~~~~~~~~~-------~~~~~i~~~S~sK~~-~~~G~r~ 254 (343)
||||.+++.+++++|+++|+++|+++|+||+|.+++|+ +..+.++..+. ...++++++||||.| +++|+|+
T Consensus 282 NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRi 361 (534)
T PLN02231 282 NPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRG 361 (534)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccce
Confidence 99999999999999999999999999999999999995 34444443331 123699999999976 7899999
Q ss_pred EEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhh-------HHHHH----HHHHHHHHHHHHHHhhc
Q 019298 255 GWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTI-------MQIMI----HGNFLENFAGSCVPSYK 323 (343)
Q Consensus 255 G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~-------~~~l~----~~~~~~~~~~~~~~~L~ 323 (343)
||+++++. ++++++++.+......+++...|.++ ..+++.+ ..+++ .++.++++++.+.+.|+
T Consensus 362 Gy~~~~~~-----~~~l~~~l~k~~~~~~~s~~~~Q~~~-~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~ 435 (534)
T PLN02231 362 GYMEVTGF-----TSDVREQIYKVASVNLCSNISGQILA-SLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALN 435 (534)
T ss_pred EEEEEecC-----CHHHHHHHHHHHhhhcCCChHHHHHH-HHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99987421 24688888777654556677788877 6666431 22232 57889999999999999
Q ss_pred CCCCceeeCCCCceEeeec
Q 019298 324 LIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 324 ~~~g~~~~~~~~g~~~~~~ 342 (343)
+++|+.+..|+||+|+|++
T Consensus 436 ~~~gi~~~~p~Ggfylw~~ 454 (534)
T PLN02231 436 SLEGVTCNKAEGAMYLFPR 454 (534)
T ss_pred cCCCceecCCCeeeEEecc
Confidence 9989998899999999954
No 47
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=8.9e-45 Score=335.54 Aligned_cols=293 Identities=26% Similarity=0.374 Sum_probs=248.4
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI 113 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al 113 (343)
.++++|+.|.|+ .+.++.+.+++.+.+.+. ..+|+++.|.++||+++++++++.+|..++++ +|++|+|+++++
T Consensus 26 ~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 100 (387)
T PRK08912 26 HGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEAL 100 (387)
T ss_pred CCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHH
Confidence 478999999976 345677888877776543 46899999999999999999998888889998 999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++..++++||+|++++|+|+.+...++..|.+++.+++++ +++.+|++.+++.++.+++++++++||||||.+++.+
T Consensus 101 ~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~ 179 (387)
T PRK08912 101 AAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPRE 179 (387)
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHH
Confidence 999999999999999999999999999999999999998753 4578999999999888889999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
++++|+++|++|++++|+||+|..+.+++....++..... .+++++++||||.|+++|+|+||++++ ++++
T Consensus 180 ~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~--------~~~~ 251 (387)
T PRK08912 180 ELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAA--------PPLL 251 (387)
T ss_pred HHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecC--------HHHH
Confidence 9999999999999999999999999887644334433332 468999999999999999999999985 4688
Q ss_pred HHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+...... .++.++..|.++ ..++....++++ .+++++++++.+.+.|+.+ |+.+..++||+|+|+++
T Consensus 252 ~~l~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~l~~~l 322 (387)
T PRK08912 252 RVLAKAHQFLTFTTPPNLQAAV-AYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVLPSQGTYFLTVDL 322 (387)
T ss_pred HHHHHHHhhccccCChHHHHHH-HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEecc
Confidence 888766542 345666677777 455544345555 8899999999999999998 78887899999999875
No 48
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=1.7e-44 Score=333.23 Aligned_cols=314 Identities=22% Similarity=0.366 Sum_probs=259.9
Q ss_pred cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298 4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83 (343)
Q Consensus 4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 83 (343)
|.|.....+. .+......... .++.++|+.|.|. +++++.+.+++.+.+... ...|++..|.++||
T Consensus 6 ~~~~~~~~~~--~~~~~~~~~~~-------~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr 71 (387)
T PRK07683 6 NPRVKDIQIS--GIRQFSNMVQN-------YDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELR 71 (387)
T ss_pred hHHHHhCCcc--HHHHHHHHHHh-------cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHH
Confidence 4555555444 45554443321 4578999999965 566788999999987653 46899889999999
Q ss_pred HHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298 84 RAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (343)
Q Consensus 84 ~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 162 (343)
+++++++.+++|.+++++ +|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.++.+. +++.+|
T Consensus 72 ~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 150 (387)
T PRK07683 72 KAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLT 150 (387)
T ss_pred HHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCC
Confidence 999999998888888998 999999999999999999999999999999999999999999999999998754 567789
Q ss_pred HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc-CCCCCEEEEc
Q 019298 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLG 241 (343)
Q Consensus 163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~~~ 241 (343)
.+.+++.++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.+++.. .++..+ +..+++|+++
T Consensus 151 ~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~vi~~~ 229 (387)
T PRK07683 151 AEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPH-TSIAHFPEMREKTIVIN 229 (387)
T ss_pred HHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCc-CChhhccCCcCCeEEEe
Confidence 99999998888899999999999999999999999999999999999999999999876543 334444 2345899999
Q ss_pred cCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHH
Q 019298 242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCV 319 (343)
Q Consensus 242 S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~ 319 (343)
||||.|+++|+|+||++++ +++++++.+.... ..+++.+.|.++ ..+|.+...+++ .+++++++++.+.
T Consensus 230 s~SK~~~~pGlRiG~i~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (387)
T PRK07683 230 GLSKSHSMTGWRIGFLFAP--------SYLAKHILKVHQYNVTCASSISQYAA-LEALTAGKDDAKMMRHQYKKRRDYVY 300 (387)
T ss_pred eccccccCccceeEEEEcC--------HHHHHHHHHHHHhccCCCChHHHHHH-HHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999985 3688888766432 345677888888 667765444554 7888999999999
Q ss_pred HhhcCCCCceeeCCCCceEeeecC
Q 019298 320 PSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 320 ~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.|... |+.+..|+||+|+|+.+
T Consensus 301 ~~l~~~-~~~~~~~~~~~~~~~~~ 323 (387)
T PRK07683 301 NRLISM-GLDVEKPTGAFYLFPSI 323 (387)
T ss_pred HHHHHc-CCcccCCCeeEEEEEec
Confidence 999887 78888899999999853
No 49
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=2.1e-44 Score=335.02 Aligned_cols=289 Identities=16% Similarity=0.224 Sum_probs=237.2
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
+.++++|+.|+|+ +++++.+.+++++++... ...+|+++.|.++||+++++++.+.+|.++++++|++|+|+
T Consensus 33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga 108 (409)
T PRK07590 33 EAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGA 108 (409)
T ss_pred CCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCH
Confidence 5678999999955 677888999988887642 45689888999999999999998888999999999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCce-----------eEEeecCCCCCCCCCHHHHHhhhcCCceEEE
Q 019298 110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE-----------VRHFDLLPDKGWEVDLDDIESLADQNTVALV 178 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 178 (343)
++++..+. .++.+||+|++++|+|..|...++..|.+ ++.++++.++++.+|+++ +++++++
T Consensus 109 ~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~~~k~i~ 181 (409)
T PRK07590 109 KCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------EKVDIIY 181 (409)
T ss_pred HHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc------cCceEEE
Confidence 99999865 45689999999999999999999999986 888888765566665432 4789999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEE
Q 019298 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
+|+||||||.++|.+++++|+++|++||+++|+||+|..+.+++..+.++..++. .+++|+++||||+|+++|+|+||+
T Consensus 182 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~ 261 (409)
T PRK07590 182 LCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYT 261 (409)
T ss_pred EeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEE
Confidence 9999999999999999999999999999999999999999876644444444443 247999999999999999999999
Q ss_pred EEeCCCCCCCchHHHHH------------Hhhhhc-cccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhh
Q 019298 258 VTTDPCGMFRKPKVVER------------MKKYFD-ILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSY 322 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~------------l~~~~~-~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L 322 (343)
++++ +++++ +..... ...+++.+.|.++ ..++.+ ...+++ .++.++++++.+.+.|
T Consensus 262 i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 332 (409)
T PRK07590 262 VVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAA-EAVYSPEGKAQIKELIDYYMENAKIIREGL 332 (409)
T ss_pred EcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHH-HHHhcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 9963 45542 111121 1235788889888 566653 234555 8889999999999999
Q ss_pred cCCCCceeeCCCCceEeeecC
Q 019298 323 KLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 323 ~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+ |+.+..|++|+|+|+++
T Consensus 333 ~~~-~~~~~~~~g~~f~wi~~ 352 (409)
T PRK07590 333 ESA-GFEVYGGVNAPYIWVKT 352 (409)
T ss_pred Hhc-CCceecCCcceEEEEEC
Confidence 998 78887889999999975
No 50
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6e-45 Score=337.98 Aligned_cols=326 Identities=15% Similarity=0.141 Sum_probs=243.3
Q ss_pred CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298 5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPT-VHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 83 (343)
+|..+.+++ ++..+....++.. .++++||+.|.|. ..+...+.+.+.+++.+........+|+++.|.++||
T Consensus 6 ~~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR 78 (404)
T PTZ00376 6 SQVPLGPPD--PILGLAAAFKADP-----SPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFI 78 (404)
T ss_pred hcCCcCCCC--hHHHHHHHHhhcC-----CcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHH
Confidence 344455555 5666666554322 4678999999853 1121223344555554433333457899999999999
Q ss_pred HHHHHHHhhhCCCCCCCCcEE--EecChHHHHHHHHH---HhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298 84 RAIAEYLSRDLPYKLTPNDVF--VTSGCTQAIDVAMA---LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG 158 (343)
Q Consensus 84 ~~ia~~~~~~~~~~~~~~~i~--~~~g~~~al~~~~~---~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 158 (343)
+++++|+.+..+..+++++|+ .|.|+++++..++. +++++||+|++++|+|+.|...++..|.+++.+++.++++
T Consensus 79 ~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~ 158 (404)
T PTZ00376 79 EAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKT 158 (404)
T ss_pred HHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCccc
Confidence 999999966555567889998 58999999988875 5679999999999999999999999999999999865566
Q ss_pred CCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCcccccCC
Q 019298 159 WEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFGS 233 (343)
Q Consensus 159 ~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~~~ 233 (343)
+++|++.++++++ ++++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++. ...++..+..
T Consensus 159 ~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 238 (404)
T PTZ00376 159 KGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAE 238 (404)
T ss_pred CCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHh
Confidence 8999999999885 2456677899999999999999999999999999999999999999988641 2222333322
Q ss_pred -CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH----HHhhhh-ccccCcchHHHHHHHhccchhh---HHH
Q 019298 234 -TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE----RMKKYF-DILGDPATFIQVCIMYGCLSTI---MQI 304 (343)
Q Consensus 234 -~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~----~l~~~~-~~~~~~~~~~~~a~~~~~l~~~---~~~ 304 (343)
.+++|+++||||+|+++|+|+||+++.- .++++++ .+++.. ....+++.++|.++ ..+|.+. ..|
T Consensus 239 ~~~~vi~i~SfSK~~~~~GlRvG~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~ 312 (404)
T PTZ00376 239 RGVEFLVAQSFSKNMGLYGERIGALHIVC-----ANKEEAANVLSQLKLIIRPMYSSPPIHGARIA-DRILSDPELRAEW 312 (404)
T ss_pred cCCcEEEEEeCCCcccccccccceEEEEe-----CCHHHHHHHHHHHHHHHhhhcCCCchHHHHHH-HHHhCCHHHHHHH
Confidence 3489999999999999999999984210 0234444 444333 22345677888888 7777654 233
Q ss_pred HH----HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298 305 MI----HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 305 l~----~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l 343 (343)
.+ .+++++++|+.+.+.|++++ ++.+..|+||+|+|+++
T Consensus 313 ~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~ 358 (404)
T PTZ00376 313 LSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGL 358 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCC
Confidence 22 56789999999999998862 35566899999999874
No 51
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.6e-44 Score=329.26 Aligned_cols=288 Identities=21% Similarity=0.325 Sum_probs=245.5
Q ss_pred eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHH
Q 019298 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDV 115 (343)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~ 115 (343)
+++|+.|.|. +++++.+.+++++... ....|+++.|.++||+++++++.+.+|++++++ +|++|+|+++++..
T Consensus 2 ~~~~~~g~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~ 75 (350)
T TIGR03537 2 LFDFGTGDPK----EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH 75 (350)
T ss_pred eEeccCCCCC----CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence 5799999964 6778899999988754 356899999999999999999998889889998 99999999999999
Q ss_pred HHHHhcCCC---CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 116 AMALLSRPG---ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 116 ~~~~l~~~g---d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
++.+++++| |+|++++|+|..|...++..|.+++.+++++++++.+|+++++++++++++++++++||||||.+++.
T Consensus 76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~ 155 (350)
T TIGR03537 76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPR 155 (350)
T ss_pred HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCH
Confidence 999998887 69999999999999999999999999998766778899999999988889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
+++++|+++|+++|+++|+||+|+.+.+++. ..++...+ .+++|+++||||.||++|+|+||++++ ++++
T Consensus 156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~--------~~~~ 225 (350)
T TIGR03537 156 SYLKETIAMCREHGIILCSDECYTEIYFGEP-PHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGD--------EKLI 225 (350)
T ss_pred HHHHHHHHHHHHcCcEEEEeccccccccCCC-CCchhhcC-cCCEEEEeecccccCCccccceeeecC--------HHHH
Confidence 9999999999999999999999998876543 22333332 358999999999999999999999874 4688
Q ss_pred HHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++..... ..+.+.+.|.++ ..++.+ .++++ .+++++++++.+.+.|+.. |+.+..|++|+|+|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~q~~~-~~~l~~-~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~ 295 (350)
T TIGR03537 226 SFLRKLRANFGVASPDFVQAAA-KAAWSD-DNHVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLWVKV 295 (350)
T ss_pred HHHHHHHHhhccCCCHHHHHHH-HHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEEEEEEEC
Confidence 888876542 335555677776 455554 34444 8889999999999999988 78887899999999975
No 52
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.5e-44 Score=333.61 Aligned_cols=294 Identities=22% Similarity=0.340 Sum_probs=252.5
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a 112 (343)
..++++|+.|.|+ +++++.+.+++++.+... ...|++..|.+++|+++++++.+.++...+++ +|++|+|++++
T Consensus 29 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~a 103 (386)
T PRK09082 29 EHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEA 103 (386)
T ss_pred hCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHH
Confidence 3468999999965 566788999998887653 45899989999999999999998888777776 89999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
+..++.+++++||+|++++|+|..+...++..|.+++.++++. .++.+|++++++.++++++++++++||||||.+++.
T Consensus 104 l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~ 182 (386)
T PRK09082 104 LFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSA 182 (386)
T ss_pred HHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCH
Confidence 9999999999999999999999999999999999999999864 357899999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
+++++|+++|++||+++|+||+|.++.+++....++..+.. .+++++++||||.||++|+|+||++++ +++
T Consensus 183 ~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~--------~~l 254 (386)
T PRK09082 183 ADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP--------AAL 254 (386)
T ss_pred HHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC--------HHH
Confidence 99999999999999999999999999987654444444433 468999999999999999999999985 478
Q ss_pred HHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 272 VERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++.+++... ...+++.+.|.++ ..++.+..++++ .++.++++++.+.+.|++. |+.+..++||+|+|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~~~~~~~~ 326 (386)
T PRK09082 255 SAEFRKVHQYNTFTVNTPAQLAL-ADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLLPCEGTYFQLVDY 326 (386)
T ss_pred HHHHHHHHhhhcCCCChHHHHHH-HHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCeeEEEEEec
Confidence 888887754 3557888899888 666653334444 8889999999999999986 78887899999999874
No 53
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=3.4e-44 Score=332.26 Aligned_cols=293 Identities=20% Similarity=0.315 Sum_probs=245.5
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a 112 (343)
+.++++|+.|.|+ ...++.+.+++.+.+.......|+++.|.++||+++++++.+++|..++++ ++++|+|++++
T Consensus 28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~ 103 (395)
T PRK08175 28 GEDIIDFSMGNPD----GPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG 103 (395)
T ss_pred CCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 6789999999865 344666777777766555567899999999999999999998889888887 89999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc---CCceEEEEeCCCCCcccc
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNV 189 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~ 189 (343)
+..++..++++||+|++++|+|+.+...++..|.+++.++++.++. +.+++++.++ .+++++++++||||||.+
T Consensus 104 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~ 180 (395)
T PRK08175 104 LAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQC 180 (395)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCCC
Confidence 9999999999999999999999999888899999999998865433 4777877765 367899999999999999
Q ss_pred cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc
Q 019298 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (343)
Q Consensus 190 ~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~ 268 (343)
++.+++++|+++|+++|+++|+||+|.++.+++....++..++. .+++++++||||.||++|+|+||++++
T Consensus 181 ~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~-------- 252 (395)
T PRK08175 181 VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN-------- 252 (395)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC--------
Confidence 99999999999999999999999999999887654444444432 357899999999999999999999974
Q ss_pred hHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 269 PKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 269 ~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++++++.... ..+++...|.++ ..+|.+...+++ .++.++++++.+.+.|+.+ |+.+..|++|+|+|+++
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l 327 (395)
T PRK08175 253 PELVSALARIKSYHDYGTFTPLQVAA-IAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKI 327 (395)
T ss_pred HHHHHHHHHHHhhcccCCCcHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEEC
Confidence 4788888877543 445667778777 566665455555 7889999999999999998 78877899999999975
No 54
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.8e-44 Score=340.05 Aligned_cols=300 Identities=20% Similarity=0.315 Sum_probs=241.1
Q ss_pred ccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHh----c-------CCCCCCCCCCCCHHHHHHHHHHHhhhCC-
Q 019298 28 VDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALL----S-------EKFNGYAPTAGLPLTRRAIAEYLSRDLP- 95 (343)
Q Consensus 28 ~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~- 95 (343)
++...++.++|+|+.++.. + ..+.+.+.+++... . .....|++..|.++||+++|+|+++.+|
T Consensus 39 y~~~~np~g~i~l~~aEN~----l-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~ 113 (496)
T PLN02376 39 FHLSRNPHGIIQMGLAENQ----L-CLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGG 113 (496)
T ss_pred CCcccCCCceEEeecchhh----h-hHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCC
Confidence 4444557789999999822 2 22333444333221 1 1344688889999999999999998877
Q ss_pred -CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH-hcCceeEEeecCCCCCCCCCHHHHHhhhc--
Q 019298 96 -YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLDDIESLAD-- 171 (343)
Q Consensus 96 -~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-- 171 (343)
..+++++|++|+|+++++..+++++++|||.|++++|+|+.+...+. ..|.+++.++++.++++++|++.+++++.
T Consensus 114 ~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a 193 (496)
T PLN02376 114 KVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKA 193 (496)
T ss_pred CCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999998777 58999999999776778999999976532
Q ss_pred ----CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc----CC----CCCEEE
Q 019298 172 ----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF----GS----TVPILT 239 (343)
Q Consensus 172 ----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~----~~----~~~~i~ 239 (343)
.+++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.|.+..+.++..+ +. .+++++
T Consensus 194 ~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~v 273 (496)
T PLN02376 194 QESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHI 273 (496)
T ss_pred HhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEE
Confidence 367889999999999999999999999999999999999999999999877655554433 11 135788
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-----HHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-----HGNFLENF 314 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-----~~~~~~~~ 314 (343)
++||||.||++|+|+||+++++ +.+.+.++.... .+.++.+.|.++ ..+|.+ .+|++ .+++++++
T Consensus 274 v~S~SK~~glpGlRvG~li~~~-------~~l~~~~~~~~~-~~~vs~~~Q~a~-~~~L~d-~~~~~~~l~~~r~~l~~r 343 (496)
T PLN02376 274 VYSLSKDMGLPGFRVGIVYSFN-------DSVVSCARKMSS-FGLVSSQTQLML-ASMLSD-DQFVDNFLMESSRRLGIR 343 (496)
T ss_pred EEeccccCCCCcceEEEEEECC-------HHHHHHHHHHhh-cCCCCHHHHHHH-HHHhCC-hhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999864 346666555443 445788899988 777765 34432 68889999
Q ss_pred HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 315 AGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++.+.+.|++. |+.+..++||+|+|+++
T Consensus 344 ~~~l~~~L~~~-gi~~~~~~aG~flwi~l 371 (496)
T PLN02376 344 HKVFTTGIKKA-DIACLTSNAGLFAWMDL 371 (496)
T ss_pred HHHHHHHHHHC-CCcccCCCceEEEEEEc
Confidence 99999999987 78887899999999985
No 55
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=7.4e-44 Score=329.40 Aligned_cols=294 Identities=27% Similarity=0.390 Sum_probs=248.3
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI 113 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al 113 (343)
.++++|+.|.|+ .+.++.+.+++.+.+... ...|+++.|.++||+++++++.+.+|...+++ +|++|+|+++++
T Consensus 24 ~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 98 (387)
T PRK07777 24 TGAVNLGQGFPD----EDGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAI 98 (387)
T ss_pred CCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHH
Confidence 478999999976 333566788888777653 36799989999999999999988888888776 799999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
..++..++++||+|+++.|+|..+...++..|.+++.++++++ +++.+|++++++.++++++++++++||||||.+++.
T Consensus 99 ~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~ 178 (387)
T PRK07777 99 AAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTA 178 (387)
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCH
Confidence 9999999999999999999999999999999999999988765 467899999999988888999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
+++++|+++|+++++++|+||+|.++.+++....++..+.. .+++++++||||.|+++|+|+||++++ +++
T Consensus 179 ~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~--------~~l 250 (387)
T PRK07777 179 AELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGP--------APL 250 (387)
T ss_pred HHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecC--------HHH
Confidence 99999999999999999999999999886654444444432 458999999999999999999999985 367
Q ss_pred HHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 272 VERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++..... ....+.+.|.++ ..++.+...+++ .++.++++++.+.+.|+.+ |+.+..|+||+|+|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~~~~~~~~ 322 (387)
T PRK07777 251 IAAVRAAKQYLTYVGGAPFQPAV-AHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGTYFLCADP 322 (387)
T ss_pred HHHHHHHHhhcccCCCCHHHHHH-HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcceEEEecc
Confidence 8888766542 345566777776 555654456665 7889999999999999988 78887899999999863
No 56
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=8.7e-44 Score=328.99 Aligned_cols=292 Identities=23% Similarity=0.398 Sum_probs=246.9
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAI 113 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al 113 (343)
++.|+|+.|.|. +++++.+.+++.++.... ...|++..|.++||+++++++.+.++..+.+ ++|++|+|+++++
T Consensus 30 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al 104 (391)
T PRK07309 30 PGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEAL 104 (391)
T ss_pred CCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 578999999965 566788899988877643 3579998999999999999999888887764 7999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCccccc
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVY 190 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~ 190 (343)
..++++++++||+|++++|+|..+...++..|.+++.++.+. +++.+|++.++++++. +++++++++||||||.++
T Consensus 105 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~ 183 (391)
T PRK07309 105 SASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTY 183 (391)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCc
Confidence 999999999999999999999999999999999999988753 4578999999998864 578999999999999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 270 (343)
+.+++++|+++|++||+++|+|++|.++.+++....++..+. .+++++++||||.|+++|+|+||++++ ++
T Consensus 184 s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~GlRvG~~v~~--------~~ 254 (391)
T PRK07309 184 SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-PDQTILINGLSKSHAMTGWRIGLIFAP--------AE 254 (391)
T ss_pred CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-cCCEEEEecChhhccCccceeEEEEeC--------HH
Confidence 999999999999999999999999999998654443443332 268999999999999999999999985 46
Q ss_pred HHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHH-HHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 271 VVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIM-IHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 271 ~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++..... ...+++.+.|.++ ..+|++...+. ..+++++++++.+.+.|+.+ |+.+..|++|+|+|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~~~~~l 327 (391)
T PRK07309 255 FTAQLIKSHQYLVTAATTMAQFAA-VEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFYIFAKI 327 (391)
T ss_pred HHHHHHHHHhhcccCCChHHHHHH-HHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEEC
Confidence 8888876643 2456788888888 66676543333 37788999999999999988 78888899999999864
No 57
>PRK07324 transaminase; Validated
Probab=100.00 E-value=3e-44 Score=329.73 Aligned_cols=289 Identities=22% Similarity=0.305 Sum_probs=246.9
Q ss_pred ccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
-.+..+++|+.|+|+ ++.++.+ +++.+++....+ +|++..|.++||+++++++. .+++++|++|+|+++
T Consensus 23 ~~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~ 91 (373)
T PRK07324 23 IAESCIDSLTLEELL----ALAGKNP-EAFYQELGQKKL-TYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATG 91 (373)
T ss_pred cccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCCc-cCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHH
Confidence 347889999999975 5556666 777777766544 89999999999999999984 367899999999999
Q ss_pred HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~ 191 (343)
++..++.+++++||+|+++.|+|..+...++..|.+++.++++.++++.+|++++++.++++++++++++||||||.+++
T Consensus 92 al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~ 171 (373)
T PRK07324 92 ANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMD 171 (373)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999987778889999999988888999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
.+++++|+++|++||+++|+||+|.++.+++. ..++.. ..+++|+++||||.|+++|+|+||++++ +++
T Consensus 172 ~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~--~~~~~I~~~s~SK~~~~~G~RiG~i~~~--------~~l 240 (373)
T PRK07324 172 RAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIAD--LYEKGISTNSMSKTYSLPGIRVGWIAAN--------EEV 240 (373)
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhh--ccCCEEEEecchhhcCCccceeEEEecC--------HHH
Confidence 99999999999999999999999999887643 223322 2357899999999999999999999984 468
Q ss_pred HHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 272 VERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++++.... ..+.+.+.|.++ ..+|++...+++ .++.++++++.+.+.|.+.+++.+..|++|+|+|+++
T Consensus 241 i~~~~~~~~~~~~~~~~~~q~~a-~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~ 313 (373)
T PRK07324 241 IDILRKYRDYTMICAGVFDDMLA-SLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKL 313 (373)
T ss_pred HHHHHHHhCcEEecCChHHHHHH-HHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEe
Confidence 8888887653 456778888877 666766556666 7888899999999999888788878999999888754
No 58
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=2e-43 Score=323.93 Aligned_cols=306 Identities=23% Similarity=0.298 Sum_probs=247.5
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|++|+|....+.. .+..+...... ++.+.++|+.|.|. .+.++.+.+++++... ..+|+++.|.+
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~ 65 (364)
T PRK07865 1 MPVSARLPDFPWD--TLAPAKATAAA------HPDGIVDLSVGTPV----DPVPPVIQEALAAAAD---APGYPTTAGTP 65 (364)
T ss_pred CCccccCCCccHH--HHHHHHHHHHh------cCCCEEEcCCCCCC----CCCCHHHHHHHHHHHh---hCCCCCccCCH
Confidence 7899999988866 55555443322 25678999999864 4557888888877643 24899989999
Q ss_pred HHHHHHHHHHhhhCCCC-CCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG 158 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~-~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 158 (343)
++|+++++|+.+++|.. +++++|++|+|+++++..++..+ +++||.|++++|+|+.+...++..|.++..++
T Consensus 66 ~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~------ 139 (364)
T PRK07865 66 ELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD------ 139 (364)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC------
Confidence 99999999999988886 99999999999999999988888 69999999999999999999999999888763
Q ss_pred CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc---CCCC
Q 019298 159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTV 235 (343)
Q Consensus 159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~---~~~~ 235 (343)
++++++. .+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.....+... ...+
T Consensus 140 ---~~~~l~~---~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 213 (364)
T PRK07865 140 ---SLTELGP---QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHT 213 (364)
T ss_pred ---ChhhCCc---ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccc
Confidence 1233322 467899999999999999999999999999999999999999999988765322221110 1235
Q ss_pred CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHHHH
Q 019298 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENF 314 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~ 314 (343)
++|+++||||.|+++|+|+||++++ ++++++++.... ...+++.+.|.++ ..+|.+...+.+.++.++++
T Consensus 214 ~~i~~~S~SK~~~~~GlRiG~i~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~ 284 (364)
T PRK07865 214 GLLAVHSLSKQSNLAGYRAGFVAGD--------PALVAELLEVRKHAGMMVPAPVQAAM-VAALGDDAHVREQRERYARR 284 (364)
T ss_pred eEEEEeechhccCCCceeeEEEecC--------HHHHHHHHHHHHhcCCCcCHHHHHHH-HHHhCCHHHHHHHHHHHHHH
Confidence 8999999999999999999999884 468888877653 3457788888888 66776533333488899999
Q ss_pred HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 315 AGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++.+.+.|++. |+.+..|++|+|+|+++
T Consensus 285 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 312 (364)
T PRK07865 285 RAVLRPALEAA-GFRVDHSEAGLYLWATR 312 (364)
T ss_pred HHHHHHHHHHc-CCcccCCCccEEEEEeC
Confidence 99999999987 78877899999999864
No 59
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-43 Score=323.24 Aligned_cols=284 Identities=20% Similarity=0.266 Sum_probs=233.5
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.++++|+.|+|. +++++.+.+++.+... ....|+++.|.++||+++++++++++|.++++++|++|+|+++++
T Consensus 23 ~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al 96 (374)
T PRK05839 23 EYKGLDLTIGEPQ----FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVL 96 (374)
T ss_pred CCCeEEcCCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 5699999999965 6677888888887653 356899999999999999999999889889999999999999999
Q ss_pred HHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298 114 DVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 114 ~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~ 191 (343)
..++..++ .+||.|++++|+|+.|...++..|.+++.++++.++++.+|++..+ + ++++++++++||||||.+++
T Consensus 97 ~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~s 173 (374)
T PRK05839 97 FNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTLS 173 (374)
T ss_pred HHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCcccC
Confidence 99888764 5789999999999999999999999999999977777777765543 2 36899999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc------CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCC
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF------GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~------~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~ 265 (343)
.+++++|+++|+++|+++|+||+|.++.+++. ..++... ...+++|+++||||.|+++|+|+||++++
T Consensus 174 ~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~-~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~----- 247 (374)
T PRK05839 174 LEELIEWVKLALKHDFILINDECYSEIYENTP-PPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD----- 247 (374)
T ss_pred HHHHHHHHHHHHHcCCEEEeccchhhcccCCC-CCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC-----
Confidence 99999999999999999999999999865432 2222211 13368999999999999999999999984
Q ss_pred CCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 266 FRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 266 ~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++++++.... ...+.+...|.++ ..++.+ .++++ .+++++++++.+.+.| ++. .|++|+|+|+++
T Consensus 248 ---~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~-~~~~~~~~~~~~~~~~~~~~~l----~~~--~p~gg~fi~~~~ 316 (374)
T PRK05839 248 ---ASILKKYKAYRTYLGCASPLPLQKAA-AVAWLD-DEHAEFFRNIYAKNLKLAREIL----GIT--IPPATFYVWLPV 316 (374)
T ss_pred ---HHHHHHHHHHHhhcCCCCChHHHHHH-HHHhcc-chHHHHHHHHHHHHHHHHHHhc----CCC--CCCeeEEEEEeC
Confidence 468888877653 2456777888877 545554 44554 7888999998887765 222 789999999975
No 60
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-43 Score=325.18 Aligned_cols=285 Identities=20% Similarity=0.274 Sum_probs=237.6
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhC--CCCCCCCcEEEecChHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDL--PYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~--~~~~~~~~i~~~~g~~~a 112 (343)
+.++|+.|+| .+++++.+.+++.+++.... ...|++ .|.++||+++++|+++++ ++.+++++|++|+|++++
T Consensus 29 ~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a 103 (374)
T PRK02610 29 QLDRLDTNEF----PYDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL 103 (374)
T ss_pred ceeEecCCCC----CCCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence 5799999994 48889999999998876542 457965 699999999999998766 466899999999999999
Q ss_pred HHHHHHHhcCCCC-eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc----CCceEEEEeCCCCCcc
Q 019298 113 IDVAMALLSRPGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIINPGNPCG 187 (343)
Q Consensus 113 l~~~~~~l~~~gd-~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~p~nptG 187 (343)
|..++.+++.+|| +|++++|+|..|...++..|.+++.++++. +++++|+++++++++ ++++++++++||||||
T Consensus 104 l~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG 182 (374)
T PRK02610 104 IRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTG 182 (374)
T ss_pred HHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCC
Confidence 9988888777886 899999999999999999999999998753 458899999999886 4789999999999999
Q ss_pred cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC
Q 019298 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267 (343)
Q Consensus 188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~ 267 (343)
.+++.++++++.++| +++++|+||+|.+|.+.. .+..+...+++|+++||||+||++|+|+||++++
T Consensus 183 ~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~----~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~------- 249 (374)
T PRK02610 183 NPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT----LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGH------- 249 (374)
T ss_pred CCCCHHHHHHHHhcc--CCcEEEEeccccccCccc----hHHHHhcCCCEEEEEecchhccCcccceeeeecC-------
Confidence 999999999999987 389999999999886321 1222334457899999999999999999999984
Q ss_pred chHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 268 KPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++.+.+... .++.+.+.|.++ ..++.+...+.+..+.+.++++.+.+.|+.++++.+ .|++|+|+|+++
T Consensus 250 -~~l~~~l~~~~~-~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~g~f~~~~l 321 (374)
T PRK02610 250 -PELIAVLEKVRL-PYNLPSFSQLAA-QLALEHRQELLAAIPEILQERDRLYQALQELPQLRV-WPSAANFLYLRL 321 (374)
T ss_pred -HHHHHHHHHhcC-CCCCCHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEe-CCCcceEEEEeC
Confidence 468888877663 456788899888 777777667777555556668888899988878775 689999999975
No 61
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-43 Score=329.12 Aligned_cols=295 Identities=25% Similarity=0.358 Sum_probs=253.6
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--C-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--K-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
....++|+.|.|+. .+.+...+.+.+.+.++.. . ...|.++.|.++||+.+++++...+|+.+.+++|++|+|++
T Consensus 88 ~~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q 165 (459)
T COG1167 88 DPSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQ 165 (459)
T ss_pred CCceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHH
Confidence 37889999999763 3556778888888877532 2 56888889999999999999997799999999999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEe-CCCCCccc
Q 019298 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVII-NPGNPCGN 188 (343)
Q Consensus 111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~-~p~nptG~ 188 (343)
++++.+++.+++|||+|++.+|+|......++..|.+++.++++ +.++|+|+|++.++. ++++++++ +-|||||.
T Consensus 166 ~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~ 242 (459)
T COG1167 166 QALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGV 242 (459)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCC
Confidence 99999999999999999999999999999999999999999985 346999999999876 45555443 33899999
Q ss_pred ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc
Q 019298 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (343)
Q Consensus 189 ~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~ 268 (343)
+||.+..++|+++|++||++||+||.|+.+.+++.+.+++..++..++||+++||||+ .+||+|+||++++.
T Consensus 243 tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p~------- 314 (459)
T COG1167 243 TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAPP------- 314 (459)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCCH-------
Confidence 9999999999999999999999999999999998877778888888999999999999 68999999999963
Q ss_pred hHHHHHHhhhhc-cccCcchHHHHHHHhccchh--hHHHHH-HHHHHHHHHHHHHHhhcCC-C-CceeeCCCCceEeeec
Q 019298 269 PKVVERMKKYFD-ILGDPATFIQVCIMYGCLST--IMQIMI-HGNFLENFAGSCVPSYKLI-P-ELINFKSTGSSLKYLD 342 (343)
Q Consensus 269 ~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~--~~~~l~-~~~~~~~~~~~~~~~L~~~-~-g~~~~~~~~g~~~~~~ 342 (343)
++++++..... ...+++.+.|.++ +..+.+ ..++++ +++.++++++.+.+.|.+. | +..+..|+||+|+|++
T Consensus 315 -~~~~~~~~~k~~~~~~~s~~~Q~~l-a~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~ 392 (459)
T COG1167 315 -ELIEKLLRLKQAADLGPSSLSQAAL-AAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLE 392 (459)
T ss_pred -HHHHHHHHHHHHhcCCCChHHHHHH-HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEE
Confidence 68888887754 3668899999888 444443 233333 9999999999999999984 4 4558899999999997
Q ss_pred C
Q 019298 343 L 343 (343)
Q Consensus 343 l 343 (343)
|
T Consensus 393 l 393 (459)
T COG1167 393 L 393 (459)
T ss_pred c
Confidence 5
No 62
>PLN02397 aspartate transaminase
Probab=100.00 E-value=4.6e-43 Score=326.31 Aligned_cols=321 Identities=15% Similarity=0.141 Sum_probs=232.4
Q ss_pred cccCcCccccHHHHHHHHHhhccccccccceeEeccCC-CCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHH
Q 019298 7 GIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGD-PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRA 85 (343)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 85 (343)
....+.+ ++..+...+..+. +...++|+.|. |+........+.+.++....+..+...+|++..|.++||++
T Consensus 27 ~~~~~~~--~i~~~~~~~~~~~-----~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~a 99 (423)
T PLN02397 27 VEPAPPD--PILGVTEAFLADP-----SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKL 99 (423)
T ss_pred CCcCCCC--hHHHHHHHHhhCC-----CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHH
Confidence 3344444 6777777665443 56789999997 44211111245666665554444445589999999999999
Q ss_pred HHHHHhhhCCCCCCCCcEEE--ecChHHH--HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCC
Q 019298 86 IAEYLSRDLPYKLTPNDVFV--TSGCTQA--IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV 161 (343)
Q Consensus 86 ia~~~~~~~~~~~~~~~i~~--~~g~~~a--l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 161 (343)
+++++.+......++++|.. +.+++++ +...+..++.|||+|++++|+|+.|...++..|++++.+++..++++++
T Consensus 100 ia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~ 179 (423)
T PLN02397 100 SAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGL 179 (423)
T ss_pred HHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCcc
Confidence 99999654333333344421 2333333 3333444456999999999999999999999999999998854455889
Q ss_pred CHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCcccccC-CCC
Q 019298 162 DLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFG-STV 235 (343)
Q Consensus 162 d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~~-~~~ 235 (343)
|++.+++.+. .+++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+. ..+
T Consensus 180 d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 259 (423)
T PLN02397 180 DFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGH 259 (423)
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCC
Confidence 9998887765 3567788899999999999999999999999999999999999999998651 222333332 224
Q ss_pred CEEEEccCccccCCCCCcEEEEE--EeCCCCCCCchHHHH----HHhhhhc-cccCcchHHHHHHHhccchhhH---HH-
Q 019298 236 PILTLGSLSKRWIVPGWRLGWFV--TTDPCGMFRKPKVVE----RMKKYFD-ILGDPATFIQVCIMYGCLSTIM---QI- 304 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G~r~G~i~--~~~~~~~~~~~~~~~----~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~---~~- 304 (343)
++|+++||||+|+++|+|+||++ +++ +++++ .+++... ...+++.+.|.++ ..+|++.. +|
T Consensus 260 ~vI~~~SfSK~~~~~G~RvG~~v~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~L~~~~~~~~~~ 331 (423)
T PLN02397 260 EILVAQSYAKNMGLYGERVGALSVVCKS-------ADVAVRVKSQLKLIARPMYSNPPIHGASIV-ATILGDPELFSEWT 331 (423)
T ss_pred cEEEEEECcccCCCccccceEEEEEeCC-------HHHHHHHHHHHHHHHhcccCCCcHHHHHHH-HHHhCCHHHHHHHH
Confidence 79999999999999999999986 322 23333 4444432 2446677888887 67777632 34
Q ss_pred --HH-HHHHHHHHHHHHHHhhcCCCC----ceeeCCCCceEeeecC
Q 019298 305 --MI-HGNFLENFAGSCVPSYKLIPE----LINFKSTGSSLKYLDL 343 (343)
Q Consensus 305 --l~-~~~~~~~~~~~~~~~L~~~~g----~~~~~~~~g~~~~~~l 343 (343)
++ .+++++++|+.+.+.|+++ | +.+..|+||+|+|+++
T Consensus 332 ~~~~~~~~~~~~rr~~l~~~L~~~-~~~~~~~~~~p~gg~fl~~~l 376 (423)
T PLN02397 332 KELKGMADRIISMRQKLYDALEAR-GSPGDWSHITKQIGMFSFTGL 376 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCcccCCceEEEecCC
Confidence 32 7889999999999999988 5 7777899999999975
No 63
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.2e-43 Score=322.72 Aligned_cols=280 Identities=20% Similarity=0.278 Sum_probs=236.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
..++|+|+.|+ +++++++.+++++.+.+.. ...|+ ..|.++||+++++++ ++++++|++|+|++++|
T Consensus 28 ~~~~i~l~~ne----n~~~~~~~v~~a~~~~~~~--~~~Yp-~~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~i 94 (366)
T PRK01533 28 DHSFVKLASNE----NPFGCSPRVLDELQKSWLD--HALYP-DGGATTLRQTIANKL------HVKMEQVLCGSGLDEVI 94 (366)
T ss_pred CCceEEeCCCC----CCCCCCHHHHHHHHHHHHh--cCcCC-CCCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 56789999999 4588999999999887654 24575 478999999999998 57899999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++++++++||+|++++|+|+.|...++..|.+++.++++ ++.+|+++++++++++++++++|+||||||.+++.+
T Consensus 95 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~ 171 (366)
T PRK01533 95 QIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDR 171 (366)
T ss_pred HHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHH
Confidence 99999999999999999999999999999999999999873 346999999999888899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++++|+++|++++ ++|+||+|.++.+.+.....+..+...+++|+++||||.|+++|+|+||++++ +++++
T Consensus 172 ~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~--------~~~~~ 242 (366)
T PRK01533 172 KLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH--------EELIE 242 (366)
T ss_pred HHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC--------HHHHH
Confidence 9999999998876 67789999988765432222333445578999999999999999999999884 47888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++... .++++.++|.++ .++|.+ .+|.+ .++.++++++++.+.++.+ |+.+.. .+|+|+|+++
T Consensus 243 ~l~~~~~-~~~~~~~~q~aa-~~~l~~-~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~~-~~~nf~~~~~ 308 (366)
T PRK01533 243 KLNVVRL-PFNVSSLAQKAA-TIAFGD-DEFIEEIVRVNTEGLRQYESFCKEN-EIPFYQ-SQTNFIFLPV 308 (366)
T ss_pred HHHHhcC-CCCcCHHHHHHH-HHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhC-CCccCC-CcCcEEEEeC
Confidence 8887764 568899999999 777765 56665 7778888888888888888 787744 4688999874
No 64
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=4.4e-42 Score=318.76 Aligned_cols=287 Identities=19% Similarity=0.277 Sum_probs=229.0
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
+.++++|+.|+|. +++++.+.+++.+.+.+. ...+|.|..|.++||+++|+++.+ ..+++++|++|+|+
T Consensus 32 ~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~---~~~~~d~I~it~Ga 104 (402)
T TIGR03542 32 SADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYR---GRIDPEEIFISDGA 104 (402)
T ss_pred CCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHh---cCCCHHHEEECCCc
Confidence 5788999999954 677888999988887642 345798889999999999998733 24789999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCc-----------eeEEeecCCCCCCCCCHHHHHhhhcCCceEEE
Q 019298 110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHI-----------EVRHFDLLPDKGWEVDLDDIESLADQNTVALV 178 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 178 (343)
++++..++ .++.+||+|++++|+|..|...++..|. +++.++.+.++++.+|++. ..++++++
T Consensus 105 ~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i~ 178 (402)
T TIGR03542 105 KCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDIIY 178 (402)
T ss_pred HHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceEEE
Confidence 99999865 5568999999999999999999999999 8888887655566555432 14679999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEE
Q 019298 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
+++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..++. .+++|+++||||.||++|+|+||+
T Consensus 179 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~ 258 (402)
T TIGR03542 179 LCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWT 258 (402)
T ss_pred EeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEE
Confidence 9999999999999999999999999999999999999999876543334444443 357999999999999999999999
Q ss_pred EEeCCCCCCCchHHH--------HHHhhhh-ccccCcchHHHHHHHhccchhh-HHHH-HHHHHHHHHHHHHHHhhcCCC
Q 019298 258 VTTDPCGMFRKPKVV--------ERMKKYF-DILGDPATFIQVCIMYGCLSTI-MQIM-IHGNFLENFAGSCVPSYKLIP 326 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~--------~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~-~~~l-~~~~~~~~~~~~~~~~L~~~~ 326 (343)
+++. +++ +.+.... ....+++.+.|.++ ..++.+. ..+. +.++.++++++.+.+.|++.
T Consensus 259 i~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~- 328 (402)
T TIGR03542 259 VVPK--------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAA-EAAYAGEGLQPILEAISYYMENARILRKALEAA- 328 (402)
T ss_pred EecH--------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHH-HHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9964 343 2222222 22345788888887 6666542 2233 36788899999999999987
Q ss_pred CceeeCCCCceEeeecC
Q 019298 327 ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 327 g~~~~~~~~g~~~~~~l 343 (343)
|+.+..|++|+|+|+++
T Consensus 329 ~~~~~~~~~~~f~~v~l 345 (402)
T TIGR03542 329 GFKVYGGEHAPYLWVKT 345 (402)
T ss_pred CceecCCCceeEEEEEC
Confidence 78877788999999975
No 65
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2e-42 Score=315.65 Aligned_cols=282 Identities=16% Similarity=0.276 Sum_probs=235.6
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
..+++|+.+.+. .++++.+.+++.+.+.. ..+|++. +.++||+++++|+ ++++++|++|+|+++++.
T Consensus 19 ~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~Y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l~ 85 (354)
T PRK06358 19 NMILDFSANINP----LGVPESLKQAITENLDK--LVEYPDP-DYLELRKRIASFE------QLDLENVILGNGATELIF 85 (354)
T ss_pred cceEEecCCCCC----CCCCHHHHHHHHHHHHh--hhcCCCc-cHHHHHHHHHHHh------CCChhhEEECCCHHHHHH
Confidence 347999999843 56688999999887653 5579764 6899999999998 579999999999999999
Q ss_pred HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
.+++++ .+ +.|++++|+|+.|...++..|.+++.++++.++++.+| +++++.+..+++++++++||||||.+++.++
T Consensus 86 ~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~ 162 (354)
T PRK06358 86 NIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEE 162 (354)
T ss_pred HHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHH
Confidence 999887 44 68999999999999999999999999998766778899 6666666667899999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
+++|+++|+++++++|+||+|.++.+++.....+...+..+++|+++||||.||++|+|+||+++++ +.++++
T Consensus 163 ~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~-------~~~~~~ 235 (354)
T PRK06358 163 MKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN-------KNLAEK 235 (354)
T ss_pred HHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC-------HHHHHH
Confidence 9999999999999999999999998876533334445556799999999999999999999999853 357788
Q ss_pred HhhhhccccCcchHHHHHHHhccchhhHHHH-HHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIM-IHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+..... .++++.+.|.++ ..+|++ .+++ +.++.++++++.+.+.|++++|+.+..|+ |.|+|+++
T Consensus 236 ~~~~~~-~~~~~~~~q~~~-~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~ 301 (354)
T PRK06358 236 LLQMRE-PWSINTFADLAG-QTLLDD-KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPS-VNFIFFKL 301 (354)
T ss_pred HHHhCC-CCcchHHHHHHH-HHHhcc-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCc-ceEEEEEc
Confidence 877665 467788888888 777765 3454 48888999999999999988888776665 55899874
No 66
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.6e-42 Score=324.50 Aligned_cols=284 Identities=17% Similarity=0.181 Sum_probs=235.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+...++|+.|.|. .+++|.+.+++.+.... ...|+++.|.++||+++++++.+..+ .+++|++|+|++++|
T Consensus 84 ~~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al 154 (431)
T PRK15481 84 GTPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAI 154 (431)
T ss_pred cchhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHH
Confidence 3467899999854 44556677877776543 35799999999999999999975322 356999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEe-CCCCCcccccCH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSY 192 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~-~p~nptG~~~~~ 192 (343)
..++++++++||.|++++|+|+.|...++..|++++.++++.+ ++|++.+++++++++++++++ +||||||.+++.
T Consensus 155 ~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~ 231 (431)
T PRK15481 155 ERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCSLSA 231 (431)
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCH
Confidence 9999999999999999999999999999999999999988532 489999999887788888887 999999999999
Q ss_pred HHHHHHHHHHhhc-CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 193 QHLQKLAETANKL-KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 193 ~~l~~l~~~~~~~-~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
+++++|+++|+++ ++++|+||+|.++.+.+. ...+ .. ..+++|+++||||+|+ +|+|+||++++ +++
T Consensus 232 ~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~~~~-~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~--------~~~ 299 (431)
T PRK15481 232 RRAAALRNLLARYPQVLVIIDDHFALLSSSPY-HSVI-PQ-TTQRWALIRSVSKALG-PDLRLAFVASD--------SAT 299 (431)
T ss_pred HHHHHHHHHHHhcCCceEEecCchhhhccCCC-CCCC-cC-CCCCEEEEeeeccccC-CCceeEEEeCC--------HHH
Confidence 9999999999999 999999999999976432 1122 11 2358999999999999 99999999985 468
Q ss_pred HHHHhhhhcc-ccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 272 VERMKKYFDI-LGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++...... ..+++.+.|.++ ..+|++. .++++ .++.++++++.+.+.|++. |+.+..|++|+|+|+++
T Consensus 300 ~~~~~~~~~~~~~~~s~~~q~a~-~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l 373 (431)
T PRK15481 300 SARLRLRLNSGTQWVSHLLQDLV-YACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPL 373 (431)
T ss_pred HHHHHHHHhccccCCCHHHHHHH-HHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEEC
Confidence 8888765432 356788999999 7777763 23444 8999999999999999988 78877899999999975
No 67
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-41 Score=314.92 Aligned_cols=324 Identities=23% Similarity=0.306 Sum_probs=254.0
Q ss_pred cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHH
Q 019298 4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPL 81 (343)
Q Consensus 4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~ 81 (343)
|.......+....++.++..... ..++.+...+++|+.|.|+ +++++.+.+++.+.+... ....|++..|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~ 77 (394)
T PRK06836 3 SEKIKGLLEKSSWIRKMFEEGAR-LKAEYGADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPE 77 (394)
T ss_pred chHHHHHHhcccHHHHHHHHHHH-HHhhcCCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHH
Confidence 44444555554556666554332 1111234678999999854 567889999998877642 2568988899999
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCC
Q 019298 82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV 161 (343)
Q Consensus 82 lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 161 (343)
+|+++++++.+.++.++++++|++|+|+++++..+++.++++||.|++++|+|..+...++..|.+++.++++++ ++++
T Consensus 78 lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~ 156 (394)
T PRK06836 78 VREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQP 156 (394)
T ss_pred HHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcC
Confidence 999999999988888899999999999999999999999999999999999999999999999999999998653 4789
Q ss_pred CHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh------cCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298 162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK------LKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (343)
Q Consensus 162 d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~------~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~ 235 (343)
|+++++++++++++++++++|+||||.+++.+++++|+++|++ ||+++|+||+|.++.+++.....+. ...+
T Consensus 157 d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~--~~~~ 234 (394)
T PRK06836 157 DLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIF--KYYD 234 (394)
T ss_pred CHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChH--HccC
Confidence 9999999998889999999999999999999999999999999 8999999999999988754333322 2245
Q ss_pred CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc--ccCcchHHHHHHHhccchhhHHHHHHHHHHHH
Q 019298 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLEN 313 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~ 313 (343)
++++++||||.|+++|+|+||+++++.... -..++..+...... ..+++.+.|.++ ..++.+. ..++.+++
T Consensus 235 ~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~----~~~~~~~~ 307 (394)
T PRK06836 235 NSIVVYSFSKSLSLPGERIGYIAVNPEMED--ADDLVAALVFANRILGFVNAPALMQRVV-AKCLDAT----VDVSIYKR 307 (394)
T ss_pred cEEEEecchhhccCcceeeEEEecCHHHhh--hHHHHHHHHHHhhccccccCCHHHHHHH-HHHhCCh----HHHHHHHH
Confidence 899999999999999999999998642100 00112222222221 246778888888 4444431 14677889
Q ss_pred HHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 314 FAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 314 ~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus 308 ~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~ 336 (394)
T PRK06836 308 NRDLLYDGLTEL-GFECVKPQGAFYLFPKS 336 (394)
T ss_pred HHHHHHHHHHhC-CCEeecCCceEEEEEeC
Confidence 999999999988 78888899999999864
No 68
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=9.8e-43 Score=319.63 Aligned_cols=297 Identities=29% Similarity=0.471 Sum_probs=249.8
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAE-ALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI 113 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al 113 (343)
++|||+.|++......++++++.+++.+ .........|+++.|.++||+++++|+++..+..++++ +|++++|+++++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5799999996633222355666666655 33445677999999999999999999997788888999 999999999999
Q ss_pred HHHHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCc
Q 019298 114 DVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPC 186 (343)
Q Consensus 114 ~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~npt 186 (343)
..++..+ .++||+|++++|+|+.+...++..|.+++.+++..++++.+|+++|++.+++ +++++++++|||||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999 7899999999999999999999999999999988778899999999998887 56899999999999
Q ss_pred ccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCC
Q 019298 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265 (343)
Q Consensus 187 G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~ 265 (343)
|.+++.+++++|+++|+++|+++|+||+|..+.++.....+ ...+....++++++|+||+||++|+|+||++++
T Consensus 162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~----- 236 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAP----- 236 (363)
T ss_dssp TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEE-----
T ss_pred ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccch-----
Confidence 99999999999999999999999999999999988654333 344555567999999999999999999999995
Q ss_pred CCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHH---HHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298 266 FRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQ---IMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL 341 (343)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~---~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~ 341 (343)
+++++.++........ +.+.|.++ ..++.+... +++ .+++++++++.+.+.|++. |+.+..+++|+|+|+
T Consensus 237 ---~~~~~~l~~~~~~~~~-~~~~~~~~-~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~ 310 (363)
T PF00155_consen 237 ---PELIERLRRFQRSGLS-SSPMQAAA-AAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGFFLWV 310 (363)
T ss_dssp ---HHHHHHHHHHHHHTTS-SHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSEEEE
T ss_pred ---hhhhhhhhhccccccc-cchhhHHH-HHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCccEEEE
Confidence 4788888887653333 77777777 566665442 444 9999999999999999988 899888899999998
Q ss_pred cC
Q 019298 342 DL 343 (343)
Q Consensus 342 ~l 343 (343)
++
T Consensus 311 ~~ 312 (363)
T PF00155_consen 311 RL 312 (363)
T ss_dssp EE
T ss_pred Ec
Confidence 63
No 69
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=5.2e-42 Score=320.02 Aligned_cols=321 Identities=20% Similarity=0.252 Sum_probs=243.3
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCC
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPT 76 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~ 76 (343)
|.+|+||..+.... ++..+.....+... ..++|+|+.|.|... ..+.+.+.+++++.+... ....|+++
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~ 73 (416)
T PRK09440 1 MQFSKFGEKFTRHS-GITQLMDDLNDGLR----TPGAIMLGGGNPAHI--PEMEDYFRDLLADLLASGKLTEALGNYDGP 73 (416)
T ss_pred CchhHHHHHHHhhh-cHHHHHHHHHHHhc----CCCceeccCCCCCcc--CCHHHHHHHHHHHHhcCcccccccccCCCC
Confidence 67899999988764 56666655554432 467899999997621 123456777877776542 34589999
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC-----CCCeEEE-eCCCCcchHHHHHhcCc----
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----PGANILL-PRPGFPIYELSAAFRHI---- 146 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~gd~vl~-~~p~~~~~~~~~~~~g~---- 146 (343)
.|.++||+++++++++++|.++++++|++|+|+++++..++++++. +||.|++ .+|+|+.|...+...+.
T Consensus 74 ~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~ 153 (416)
T PRK09440 74 QGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSY 153 (416)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeec
Confidence 9999999999999998889999999999999999999999999984 5899999 69999999886654442
Q ss_pred eeEEeecCCCC-CCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 147 EVRHFDLLPDK-GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 147 ~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
....+++..++ .+.+|+++|+ +.++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.... ..
T Consensus 154 ~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~ 230 (416)
T PRK09440 154 RPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IF 230 (416)
T ss_pred ccccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-ch
Confidence 22222332211 4679999987 35577899999999999999999999999999999999999999998543110 00
Q ss_pred CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQI 304 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~ 304 (343)
..... ...+++|+++||||. +++|+|+||++++ +++++++...... ..+++.+.|.++ ..+|.+. ++
T Consensus 231 ~~~~~-~~~~~vI~~~SfSK~-~~pGlRiG~~i~~--------~~l~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~-~~ 298 (416)
T PRK09440 231 SEATP-LWNPNIILCMSLSKL-GLPGVRCGIVIAD--------EEIIEALSNMNGIISLAPGRLGPAIA-AEMIESG-DL 298 (416)
T ss_pred hhcCc-cccCCeEEEeccccc-CCCcceEEEEeCC--------HHHHHHHHHHHHHhccCCCcHHHHHH-HHHhccc-hH
Confidence 01100 114689999999996 9999999999985 4688888877543 456788999988 6777653 23
Q ss_pred HH-----HHHHHHHHHHHHHHhhcC-CC--CceeeCCCCceEeeecC
Q 019298 305 MI-----HGNFLENFAGSCVPSYKL-IP--ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 305 l~-----~~~~~~~~~~~~~~~L~~-~~--g~~~~~~~~g~~~~~~l 343 (343)
.+ .++.++++++.+.+.|.+ ++ ++.+..|+||+|+|+++
T Consensus 299 ~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~ 345 (416)
T PRK09440 299 LRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWF 345 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEEC
Confidence 22 466778888888888865 33 35567899999999974
No 70
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-42 Score=307.99 Aligned_cols=278 Identities=22% Similarity=0.355 Sum_probs=243.3
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
.++++|+.++ +++++++.+.+++++.+. .++.||++ ...+++++++++++ .+++++|++++|+.+.|.
T Consensus 22 ~~~i~LssNe----nP~gp~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~~-----~~~~~~V~~gnGsde~i~ 89 (356)
T COG0079 22 PGIIKLSSNE----NPYGPPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYYG-----VVDPENVLVGNGSDELIE 89 (356)
T ss_pred ccceeecCCC----CCCCCCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHhC-----CCCcceEEEcCChHHHHH
Confidence 3689999999 668899999999988876 46789986 78999999999993 168899999999999999
Q ss_pred HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
.++++++.+||+|+++.|+|..|...++..|.+++.++..+ |.+|++.+.+.+.++++++++||||||||..++.++
T Consensus 90 ~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~ 166 (356)
T COG0079 90 LLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREE 166 (356)
T ss_pred HHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHH
Confidence 99999999999999999999999999999999999998864 889999999999888999999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
++++++.+.+ +.++|+||||.+|.. . .....+...+|+++++||||+||++|+|+||+++ ++++++.
T Consensus 167 l~~l~~~~~~-~~~vVvDEAY~eF~~--~--~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia--------~~~~i~~ 233 (356)
T COG0079 167 LRALLEALPE-GGLVVIDEAYIEFSP--E--SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIA--------NPELIAA 233 (356)
T ss_pred HHHHHHhCCC-CcEEEEeCchhhcCC--c--hhhhhccCCCCEEEEEecHHhhhcchhceeeccC--------CHHHHHH
Confidence 9999999998 999999999999874 1 2222223456799999999999999999999887 4689999
Q ss_pred HhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+.+. .++.+.+++.++ .++|.+.....+.++.+.+.|+++.+.|+.++ +.-..|+.++|+++++
T Consensus 234 l~~vr~-p~~v~~~a~~aa-~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~ 299 (356)
T COG0079 234 LNKVRP-PFNVSSPALAAA-IAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRV 299 (356)
T ss_pred HHHhcC-CCCCCHHHHHHH-HHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEEC
Confidence 999987 677899999888 78888753334499999999999999999995 6634788899999874
No 71
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-42 Score=315.81 Aligned_cols=285 Identities=17% Similarity=0.245 Sum_probs=240.5
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
..++|+.|++ .+++++.+++++++++.. .....|++ .|.+.||+++++|+++.+|.++++++|++|+|++++|
T Consensus 27 ~~i~l~~~~~----~~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l 101 (368)
T PRK03317 27 VPVRLNTNEN----PYPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL 101 (368)
T ss_pred ceeEecCCCC----CCCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence 5699999994 488999999999988753 24568976 5889999999999999889899999999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~ 192 (343)
..++++++++||.|+++.|+|..|...++..|.+++.++.. +++++|+++++++++ ++++++++++||||||.+++.
T Consensus 102 ~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~ 179 (368)
T PRK03317 102 QQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRA--ADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPL 179 (368)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccC--CCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999888877653 467899999999886 477899999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
+++++|+++| ++++|+||+|.++.+.+.. ......+..+++++++||||+||++|+|+||++++ ++++
T Consensus 180 ~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~--------~~~~ 247 (368)
T PRK03317 180 DDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA--------PAVV 247 (368)
T ss_pred HHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC--------HHHH
Confidence 9999998877 6899999999998765432 22222334458999999999999999999999984 4788
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
+.++.... .++.+++.|.++ .++|.+...+.+.+++++++++.+.+.|+.+ |+.+..+++++++|.+
T Consensus 248 ~~l~~~~~-~~~~s~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 314 (368)
T PRK03317 248 DALRLVRL-PYHLSAVTQAAA-RAALRHADELLASVAALRAERDRVVAWLREL-GLRVAPSDANFVLFGR 314 (368)
T ss_pred HHHHhcCC-CCCCCHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCCCCCcEEEEec
Confidence 88876653 457888999888 6777765566667778899999999999987 8887788899998865
No 72
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.2e-41 Score=309.46 Aligned_cols=296 Identities=21% Similarity=0.289 Sum_probs=237.7
Q ss_pred cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP 95 (343)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 95 (343)
+++.++....+.. .++...++|+.|+|. .++++.+.+++++... ...|+++.|.++||+++++++.+++|
T Consensus 5 ~~~~~~~~~~~~~---~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~ 74 (357)
T TIGR03539 5 PWDSLAPYKAKAA---SHPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRG 74 (357)
T ss_pred hHHHHHHHHHHhh---hCCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcC
Confidence 4455554444333 346788999999864 5567888888877653 35799999999999999999998888
Q ss_pred CC-CCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC
Q 019298 96 YK-LTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN 173 (343)
Q Consensus 96 ~~-~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 173 (343)
+. +++++|++|+|+++++..++..+ +++||.|++++|+|+.+...++..|.+++.++ +++.+. .++
T Consensus 75 ~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~ 142 (357)
T TIGR03539 75 VPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVG 142 (357)
T ss_pred CCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccC
Confidence 86 99999999999999999998887 79999999999999999998899999887763 223332 246
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc--c-CCCCCEEEEccCccccCCC
Q 019298 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--F-GSTVPILTLGSLSKRWIVP 250 (343)
Q Consensus 174 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~--~-~~~~~~i~~~S~sK~~~~~ 250 (343)
++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.....+.. . ...+++|+++||||.|+++
T Consensus 143 ~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~ 222 (357)
T TIGR03539 143 PDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLA 222 (357)
T ss_pred ccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCC
Confidence 889999999999999999999999999999999999999999988876532222211 0 1235799999999999999
Q ss_pred CCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 251 G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
|+|+||++++ ++++++++..... ..+++.+.|.++ ..+|.+...+.+.++.++++++.+.+.|++. |+.
T Consensus 223 G~R~G~~i~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~ 292 (357)
T TIGR03539 223 GYRAGFVAGD--------PALVAELLTVRKHAGLMVPAPVQAAM-VAALGDDGHVAEQKARYAARRAQLKPALEKA-GFR 292 (357)
T ss_pred ceeEEEEecC--------HHHHHHHHHHHhhcccCCCHHHHHHH-HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 9999999974 3688888766542 457788888888 6667653334448888999999999999987 788
Q ss_pred eeCCCCceEeeecC
Q 019298 330 NFKSTGSSLKYLDL 343 (343)
Q Consensus 330 ~~~~~~g~~~~~~l 343 (343)
+..|++|+|+|+++
T Consensus 293 ~~~p~~~~~~~~~~ 306 (357)
T TIGR03539 293 IDHSEAGLYLWATR 306 (357)
T ss_pred CcCCCccEEEEEEC
Confidence 88899999999863
No 73
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-41 Score=309.06 Aligned_cols=276 Identities=20% Similarity=0.302 Sum_probs=230.3
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.++++|+.|++ .+++++.+.+++++.... ...|++ .|.++||+++++++ ++++++|++|+|++++|
T Consensus 29 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~al 95 (357)
T PRK14809 29 PDDLVKLSSNEN----PHGPSPAAVEAIREAAER--VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGAL 95 (357)
T ss_pred ccceeEecCCCC----CCCCCHHHHHHHHHHHhh--hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 567999999994 478888999999887653 467975 68899999999998 57899999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++++++++||.|++++|+|..|...+...|.+++.+++..++++.++.+++++.. ++++++++++||||||.++|.+
T Consensus 96 ~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~ 174 (357)
T PRK14809 96 DYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLD 174 (357)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHH
Confidence 999999999999999999999988888888999999999876667888888887765 3578999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++++|+++|++ +.++|+||+|.++.+.+. ........+++++++||||.|+++|+|+||+++++ ++++
T Consensus 175 ~~~~l~~~~~~-~~~iI~De~y~~~~~~~~---~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--------~~~~ 242 (357)
T PRK14809 175 EVEALAERTDE-ETLVVVDEAYGEFAERPS---AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--------EWAD 242 (357)
T ss_pred HHHHHHHhCcc-CcEEEEechhhhccCCch---hHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--------HHHH
Confidence 99999999975 789999999999876432 12223345689999999999999999999999863 6888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++.+... .++.+.+.|.++ ..+|.+ ..+++ .++.++++++.+.+.|... + .|.+|+|+|+++
T Consensus 243 ~~~~~~~-~~~~~~~~~~~a-~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~-~----~~~~g~f~~~~~ 305 (357)
T PRK14809 243 AYARVNT-PFAASELACRAG-LAALDD-DEHVERTVETARWAREYIREELDAP-T----WESAGNFVLAEV 305 (357)
T ss_pred HHHHhCC-CCCCCHHHHHHH-HHHhCC-HHHHHHHHHHHHHHHHHHHHHhcCc-c----CCCCCCEEEEEC
Confidence 8877654 456778888887 666665 45555 7888999999999988653 2 368899999874
No 74
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-41 Score=317.73 Aligned_cols=317 Identities=20% Similarity=0.270 Sum_probs=232.4
Q ss_pred ccccHHHHHHHHHhhccccc---cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 019298 13 SIITIKGMLSLLMQSVDDEK---NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEY 89 (343)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 89 (343)
...+|..-...+........ -=.++|+|+.|+|+ +++++.+.++. +++.. .+|+++.|.+++|++++++
T Consensus 75 ~~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~---~~Y~~~~g~~~lreaia~~ 146 (527)
T PRK09275 75 QKEGIEERFEAFLEEHKDVPGIDFLRDAVSYVRDQLG----FDADEFVYELV-DGIIG---DNYPVPDRMLKHTEKIVKD 146 (527)
T ss_pred ccccHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHHHHHH-HHHhc---CCCCCCCCCHHHHHHHHHH
Confidence 33455555555554432100 01356999999965 77788888854 44432 3599999999999999996
Q ss_pred Hhhh-CCCCC-C--CCcEEEecChHHHHHHHHHH-----hcCCCCeEEEeCCCCcchHHHHHhcCc--eeEEeecCCCCC
Q 019298 90 LSRD-LPYKL-T--PNDVFVTSGCTQAIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFRHI--EVRHFDLLPDKG 158 (343)
Q Consensus 90 ~~~~-~~~~~-~--~~~i~~~~g~~~al~~~~~~-----l~~~gd~vl~~~p~~~~~~~~~~~~g~--~~~~~~~~~~~~ 158 (343)
+.++ .+... . .++|++|+|+++++..++.+ +++|||+|++++|+|+.|...+...|. .++.++.+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~ 226 (527)
T PRK09275 147 YLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENE 226 (527)
T ss_pred HHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccC
Confidence 6443 33222 2 34999999999999999886 679999999999999999998887754 455555556678
Q ss_pred CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCcccccCCCCC
Q 019298 159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236 (343)
Q Consensus 159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~ 236 (343)
|.+|.++++++++++++++++++||||||.+++.+++++|+++|++ ++++||+||+|..+.+. +.++... ..++
T Consensus 227 f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~-~~~~ 302 (527)
T PRK09275 227 WQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV-LPYN 302 (527)
T ss_pred CCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh-CCCC
Confidence 9999999999988899999999999999999999999999999964 59999999999998742 2222222 1258
Q ss_pred EEEEccCccccCCCCCcEEEEEEeCCCCCC----------------------Cch---HHHHHH----hhhh-ccccCcc
Q 019298 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMF----------------------RKP---KVVERM----KKYF-DILGDPA 286 (343)
Q Consensus 237 ~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~----------------------~~~---~~~~~l----~~~~-~~~~~~~ 286 (343)
+|+++||||.|+++|+|+||++++++.... .+| .+++++ ++.. ..+.+++
T Consensus 303 ~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s 382 (527)
T PRK09275 303 TILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLS 382 (527)
T ss_pred EEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCC
Confidence 999999999999999999999987531000 000 022222 3333 3456778
Q ss_pred hHHHHHH----HhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 287 TFIQVCI----MYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 287 ~~~~~a~----~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.|.++ ..++|.....+.+ .++.++++++.+.+.|. . ++....|+|++|+|+++
T Consensus 383 ~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~~~~p~g~fY~~~di 442 (527)
T PRK09275 383 TPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYKALYEGLG-L-PEPEDPNNAAYYTLIDL 442 (527)
T ss_pred CHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHcC-C-CCcCCCCCeeEEEEEEh
Confidence 8888863 1455665556665 88999999999988883 2 34445799999999974
No 75
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4.4e-41 Score=307.29 Aligned_cols=281 Identities=20% Similarity=0.297 Sum_probs=231.0
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.++++|+.|++ .+++++.+++++.+.+.. ...|++ .+.+++|+++|+++ ++++++|++|+|+++++
T Consensus 19 ~~~~i~l~~~~~----~~~~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l 85 (356)
T PRK08056 19 PDQLLDFSANIN----PLGMPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHH------QVPASWILAGNGETESI 85 (356)
T ss_pred hhhEEEeccccC----CCCCCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 567899999984 488899999999887653 347876 46899999999998 57899999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..+++.+ .+|+ +++.+|+|..|...++..|.+++.+++++++++.+| +++++.+.++++++++++||||||.+++.+
T Consensus 86 ~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~ 162 (356)
T PRK08056 86 FAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQ 162 (356)
T ss_pred HHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHH
Confidence 9999887 6775 677899999999999999999999998766677777 455566667889999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++++|+++|+++++++|+||+|.++.+.+....+. +...+++++++||||.|+++|+|+||+++++ +++++
T Consensus 163 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~-------~~~~~ 233 (356)
T PRK08056 163 LLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSD-------DAAVA 233 (356)
T ss_pred HHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCC-------HHHHH
Confidence 99999999999999999999999988755322221 2234689999999999999999999999853 35777
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++... .++++.+.|.++ ..++++ ..|.+ .++.++++++.+.+.|+.++|+.+ .|.+|+|+|+++
T Consensus 234 ~l~~~~~-~~~~~~~~~~~a-~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~~~~~~~~~~~ 300 (356)
T PRK08056 234 RMRRQQM-PWSINAFAALAG-EVILQD-RAYQQATWQWLAEEGARFYQALCALPLLTV-WPGRANYLFLRC 300 (356)
T ss_pred HHHHhCC-CCchhHHHHHHH-HHHhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEE-cCCCCcEEEEEc
Confidence 7776543 456777888777 666765 44554 788899999999999998888876 456799999874
No 76
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-41 Score=310.40 Aligned_cols=282 Identities=18% Similarity=0.280 Sum_probs=233.9
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.++++|+.|.+. +++++.+.+++.+... ...+|++..| .+||+++++++ ++++++|++|+|+++++
T Consensus 35 ~~~~i~l~~~~~~----~~~~~~~~~al~~~~~--~~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 101 (371)
T PRK05166 35 VPRIAKLGSNENP----LGPSPAVRRAFADIAE--LLRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDLI 101 (371)
T ss_pred CcceEEcCCCCCC----CCCCHHHHHHHHHHHH--HhhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence 5578999999843 6778899999887543 2457998888 59999999998 56889999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++.+++++||.|+++.|+|+.+...++..|.+++.++++. ++++|++++++.++++++++++++||||||.+++.+
T Consensus 102 ~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 179 (371)
T PRK05166 102 AVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTAD 179 (371)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999999999999999999998753 467999999999888889999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
++++|+++|++ +.++|+||+|.++.+++..+..+..+. ..+++|+++||||.|+++|+|+||+++++ ++++
T Consensus 180 ~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~-------~~l~ 251 (371)
T PRK05166 180 QLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD-------PELV 251 (371)
T ss_pred HHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC-------HHHH
Confidence 99999999875 889999999999986543222222222 23579999999999999999999988753 4677
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+++... .++++.++|.++ .++|.+. ++++ .++.++++++.+.+.|+++ |+.+ .|.+|+|+|+++
T Consensus 252 ~~~~~~~~-~~~~~~~~q~~~-~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~-g~~~-~p~~g~fl~~~~ 318 (371)
T PRK05166 252 GLLDRVRT-PFNVNGAAQAAA-LAALDDE-EHLAKGVALALAERERLKKELAEM-GYRI-APSRANFLFFDA 318 (371)
T ss_pred HHHHHhcc-CCCCCHHHHHHH-HHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHC-cCee-CCCcCCEEEEeC
Confidence 87776554 456788888777 5666553 4555 7888999999999999988 7776 677899999874
No 77
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-41 Score=311.01 Aligned_cols=280 Identities=20% Similarity=0.267 Sum_probs=235.1
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
...+++|+.+++. +++++.+.+++.+.+.. . .|.+..|.+++|+++++++ ++++++|++|+|+++++
T Consensus 28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~-~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 94 (359)
T PRK03158 28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE--L-ALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI 94 (359)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHHH--h-hcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence 3478999999953 67788999999887753 2 4555579999999999999 56789999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++++++++||.|++++|+|+.+...+...|.++..++++ ++.+|++++++.++++++++++++||||||.+++.+
T Consensus 95 ~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~ 171 (359)
T PRK03158 95 QMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHE 171 (359)
T ss_pred HHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999885 456899999998888889999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++.++++.|+ +|+++|+||+|.++.+++.....+...+..+++++++||||.|+++|+|+||++++ +++++
T Consensus 172 ~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~--------~~~~~ 242 (359)
T PRK03158 172 ELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS--------EELIE 242 (359)
T ss_pred HHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC--------HHHHH
Confidence 9999999875 69999999999998876543333333445568999999999999999999999985 47888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++.... .++++.++|.++ ..+|.+ ..+++ .++.++++++.+.+.|.++ |+.+ .|.+|+|+|+++
T Consensus 243 ~~~~~~~-~~~~~~~~q~~~-~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~-~~~~g~~i~~~~ 308 (359)
T PRK03158 243 KLNIARP-PFNTTRIAQYAA-IAALED-QAFLKECVEKNAEGLEQYYAFCKEY-GLFY-YPSQTNFIFVDT 308 (359)
T ss_pred HHHHhcC-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCee-CCCcCcEEEEEC
Confidence 8877765 467899999998 777765 35555 6777888899999999888 7776 466789999874
No 78
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=1.7e-40 Score=304.05 Aligned_cols=279 Identities=17% Similarity=0.243 Sum_probs=225.9
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
..++++|+.+. +.+++++.+.+++++.+.. ...|+++ +.++||+++|+++ ++++++|++|+|++++|
T Consensus 21 ~~~~i~l~~~~----n~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~i 87 (360)
T PRK07392 21 PDAILDFSASI----NPLGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAELL 87 (360)
T ss_pred cccEEEeCCcC----CCCCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 45679999998 3478889999999887764 5679875 4689999999999 57899999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC---CCCHHHHHhhhcCCceEEEEeCCCCCccccc
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW---EVDLDDIESLADQNTVALVIINPGNPCGNVY 190 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~ 190 (343)
..+++++. +||.|++++|+|..|...++..|.+++.++++.++++ ..+++.+++.. .+++++++++||||||.++
T Consensus 88 ~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~ 165 (360)
T PRK07392 88 TWAGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLW 165 (360)
T ss_pred HHHHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCc
Confidence 99998875 6889999999999999999999999999998765543 35677776543 3678999999999999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 270 (343)
+++++.+++ +++++ +|+||+|.++.+++........+...+++|+++||||+|+++|+|+||++++ ++
T Consensus 166 ~~~~l~~l~---~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~--------~~ 233 (360)
T PRK07392 166 SREAILPLL---EQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH--------PD 233 (360)
T ss_pred CHHHHHHHH---HHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC--------HH
Confidence 987766654 57775 6779999999876542222223444568999999999999999999999985 36
Q ss_pred HHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 271 VVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 271 ~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++..... .++++.+.|.++ ..+|++ ..|.+ .++.++++++.+.+.|+.++|+.+ .+++|+|+|+++
T Consensus 234 ~~~~~~~~~~-~~~~s~~~q~~~-~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~~~~~fl~~~~ 303 (360)
T PRK07392 234 RLQRWQQWRD-PWPVNGLAAAAA-IAALAD-RDFQQQTWAWLPPAREALFQGLASLPGLTP-LPSAANFLLVQS 303 (360)
T ss_pred HHHHHHhhCC-CCCCCHHHHHHH-HHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEE-CCCCCCEEEEEc
Confidence 7777776553 467889999988 777765 45555 667889999999999998888876 568899999874
No 79
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-40 Score=303.46 Aligned_cols=287 Identities=20% Similarity=0.272 Sum_probs=238.1
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.+.|+|+.+++ .+++++.+.+++.+++.......|+++.|.+++|+++++++ ++++++|++|+|+++++
T Consensus 27 ~~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~al 96 (380)
T PRK06225 27 DKEMIWMGQNTN----HLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATESL 96 (380)
T ss_pred cCCeEEccCCCC----CCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHHH
Confidence 567899999984 47889999999999987665678998899999999999998 56888999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC-CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
..++++++.+||+|++++|+|..+...+...|.+++.++++ .++++.+|++.+++.++++++++++++|+||||.+++.
T Consensus 97 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 176 (380)
T PRK06225 97 YLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE 176 (380)
T ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence 99999999999999999999999988889999999998874 33467899999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
+++++|+++|+++|+++|+||+|..+..+.. ....+. .++++++.||||.||++|+|+||++++ ++++
T Consensus 177 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~--------~~l~ 244 (380)
T PRK06225 177 EEIKEFAEIARDNDAFLLHDCTYRDFAREHT---LAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVAT--------PDLI 244 (380)
T ss_pred HHHHHHHHHHHHCCcEEEEehhHHHHhccCC---chhhcC-CCCEEEEeechhhcCCccceeEEEecC--------HHHH
Confidence 9999999999999999999999988754321 112222 257899999999999999999999985 3688
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCce-eeCCCCceEeeecC
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELI-NFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~~~~~~l 343 (343)
+.++.......+.+.+.|.++ ..+|....++++ .++.++++++.+.+.|++++|+. ...|.+|+|+|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 316 (380)
T PRK06225 245 EVVKSIVINDLGTNVIAQEAA-IAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDI 316 (380)
T ss_pred HHHHHHHhcccCCCHHHHHHH-HHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEc
Confidence 887766433456778888777 555554455655 56667788888888998877754 23577889999864
No 80
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-40 Score=306.42 Aligned_cols=275 Identities=21% Similarity=0.238 Sum_probs=229.8
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.++|+|+.|++ .++++|.+.+++.+.. ..+.|++ .+.++||+++++++ ++++++|++|+|+++++
T Consensus 51 ~~~~i~l~~n~~----p~~~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~~t~Ga~~~i 116 (380)
T PLN03026 51 PEDIVKLDANEN----PYGPPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDS------GLESENILVGCGADELI 116 (380)
T ss_pred ccceEEccCCCC----CCCCCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHh------CcChhhEEEcCCHHHHH
Confidence 468899999984 4778888888886531 2346876 46899999999998 57889999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh-cCCceEEEEeCCCCCcccccCH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-~~~~~~i~~~~p~nptG~~~~~ 192 (343)
..++.+++++||+|++++|+|..|...++..|.+++.++.+ +++.+|++++++.+ .++++++++++||||||.+++.
T Consensus 117 ~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~ 194 (380)
T PLN03026 117 DLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD 194 (380)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999874 45789999999988 6789999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
+++++|++.+ +++|+||+|.+|.+.+.. .......+++|+++||||.||++|+|+||++++ ++++
T Consensus 195 ~~l~~l~~~~----~~vi~DeaY~~~~~~~~~---~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~--------~~~i 259 (380)
T PLN03026 195 DDLLKILELP----ILVVLDEAYIEFSTQESR---MKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSII 259 (380)
T ss_pred HHHHHHHhcC----CEEEEECcchhhcCCcch---HHHHHhCCCEEEEecchHhhcCccccceeeecC--------HHHH
Confidence 9999998753 899999999998764321 122334578999999999999999999999985 4788
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+++... .++.+.++|.++ .++|.+. ++++ .++.++++|+.+.+.|+.++++.+ .|++|+|+|+++
T Consensus 260 ~~l~~~~~-~~~~~~~~q~aa-~~aL~~~-~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~ 327 (380)
T PLN03026 260 EYLWRAKQ-PYNVSVAAEVAA-CAALSNP-KYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRV 327 (380)
T ss_pred HHHHHhcC-CCCCCHHHHHHH-HHHhhCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEEC
Confidence 88887765 456788888888 7777763 5555 888999999999999998855555 789999999864
No 81
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=2.3e-40 Score=327.23 Aligned_cols=291 Identities=13% Similarity=0.244 Sum_probs=235.3
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a 112 (343)
+.++|+|+.|++ .+++++.+++++.+++... .+ ..|.+++++++++++.+++|+..++ ++|++++|++++
T Consensus 696 g~~vI~LsinE~----d~ppPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~el 766 (1082)
T PLN02672 696 ESSLIHMDVDES----FLPVPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLAL 766 (1082)
T ss_pred CCCEEEEeCCCC----CCCCCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHH
Confidence 678999999994 4889999999999877532 22 3456789999999999988988765 589999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCC-CCccccc
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPG-NPCGNVY 190 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~-nptG~~~ 190 (343)
+..++++++++||.|+++.|+|+.|...++..|.+++.++++++++|.+|.+.+++++++ +.+.+++++|| ||||.++
T Consensus 767 L~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~ 846 (1082)
T PLN02672 767 FNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLY 846 (1082)
T ss_pred HHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccC
Confidence 999999999999999999999999999999999999999997777899999999999876 45689999997 9999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC--Cccc----ccCC---CCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF--VPMG----VFGS---TVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~--~~~~----~~~~---~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
+.+++++|+++|++||++||+||+|.++.|++... .++. .+.. ..+|++++||||.|+++|+|+||+++++
T Consensus 847 S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~ 926 (1082)
T PLN02672 847 SNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALND 926 (1082)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCC
Confidence 99999999999999999999999999998865421 1111 1111 2479999999999999999999999864
Q ss_pred CCCCCCchHHHHHHhhhhccccCcchHHHHHHH--hccch-hhHHH---H-HHHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298 262 PCGMFRKPKVVERMKKYFDILGDPATFIQVCIM--YGCLS-TIMQI---M-IHGNFLENFAGSCVPSYKLIPELINFKST 334 (343)
Q Consensus 262 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~--~~~l~-~~~~~---l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~ 334 (343)
++++++++..... ..+....|.++. .+++. ....| + +.++.++++++.+.+.|+++ |+.+..|+
T Consensus 927 -------~eLi~~l~~~~~~-s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~Pe 997 (1082)
T PLN02672 927 -------SVLIDAFHSAPGL-SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVLEPQ 997 (1082)
T ss_pred -------HHHHHHHHHhhhh-cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEecCC
Confidence 3488888765432 222223333330 22222 11223 2 27888999999999999998 88888999
Q ss_pred CceEeeec
Q 019298 335 GSSLKYLD 342 (343)
Q Consensus 335 ~g~~~~~~ 342 (343)
||+|+|++
T Consensus 998 GGFfLwl~ 1005 (1082)
T PLN02672 998 GGISMVAK 1005 (1082)
T ss_pred cEEEEEEE
Confidence 99999985
No 82
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-40 Score=302.60 Aligned_cols=278 Identities=18% Similarity=0.310 Sum_probs=232.4
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a 112 (343)
+.++++|+.|++ .+++++.+++++.+++.......|++ .|.++||++++++++ +.+ ++|++|+|++++
T Consensus 25 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~------~~~~~~I~~t~G~~~~ 93 (356)
T PRK04870 25 ATGMVKLDAMEN----PYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG------VPAGADVLLGNGSDEL 93 (356)
T ss_pred CCCceeCcCCCC----CCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC------cCCCCcEEEcCCHHHH
Confidence 568999999994 48899999999999886555678987 678999999999983 333 589999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccC
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~ 191 (343)
+..++++++++||+|++++|+|..|...++..|.+++.++++ +++.+|++++++++. .+++++++++||||||.+++
T Consensus 94 i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~ 171 (356)
T PRK04870 94 IQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD 171 (356)
T ss_pred HHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999885 357899999999886 47899999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
.+++++++++| +.++|+||+|..+.+.+ .. ......+++++++|||| |+++|+|+||++++ +++
T Consensus 172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~~--~~--~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~--------~~~ 235 (356)
T PRK04870 172 DADVERIIEAA---PGLVVVDEAYQPFAGDS--WL--PRLARFPNLLVMRTVSK-LGLAGLRLGYLAGH--------PAW 235 (356)
T ss_pred HHHHHHHHHHC---CCEEEEECCchhhcCcc--hH--HHHhhCCCEEEEecchh-hhhHHHhhhhhhCC--------HHH
Confidence 99999999998 67899999999876432 11 12234468999999999 89999999999985 368
Q ss_pred HHHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 272 VERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++.... .++.+.+.|.++ ..++++...+.+.+++++++++.+.+.|++++|+.+ .|.+|+|+|+++
T Consensus 236 i~~~~~~~~-~~~~~~~~q~~a-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~ 304 (356)
T PRK04870 236 IAELDKVRP-PYNVNVLTQATA-LFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTV-FPSAANFILVRV 304 (356)
T ss_pred HHHHHHccC-CCcCCHHHHHHH-HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEE-CCCCCeEEEEEC
Confidence 888877654 456778888877 666665333334788899999999999999888876 577888999874
No 83
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=301.30 Aligned_cols=302 Identities=18% Similarity=0.235 Sum_probs=224.3
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC---CCcEEEecChHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT---PNDVFVTSGCTQ 111 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~---~~~i~~~~g~~~ 111 (343)
..++|.++|...........+.+.+++++. ......+|+++.|.++||+++++++.+..+ ... .++|++|+|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~ 80 (388)
T PRK08637 3 ATKYNATIGMATEKGGPMYLSSLQDLLNDL-TPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTH 80 (388)
T ss_pred ccceecceeeEecCCCcchHHHHHHHHHhh-ccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHH
Confidence 456778888754222222333344433332 223567999999999999999999976443 233 368999999999
Q ss_pred HHHHHHHHhcCCCCeEEEeCCCCcchHHHH-HhcCceeEEeecCCCCCCCCCHHHHHhhhc----CCceEEEEeCCCCCc
Q 019298 112 AIDVAMALLSRPGANILLPRPGFPIYELSA-AFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIINPGNPC 186 (343)
Q Consensus 112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~p~npt 186 (343)
++..++.+++++||.|++++|+|+.|...+ ...|.+++.+++.. +++++|++++++.++ +.+.++++++|||||
T Consensus 81 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPT 159 (388)
T PRK08637 81 GLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPNNPT 159 (388)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCC
Confidence 999999999999999999999999998875 46899999998843 234689999998876 345567788999999
Q ss_pred ccccCHHHHHHHHHHHhh-----cCcEEEEccCCCccccCCCCCCcc-ccc-CCCCCE--EEEccCccccCCCCCcEEEE
Q 019298 187 GNVYSYQHLQKLAETANK-----LKTLVIADEVYGHLVFGDKPFVPM-GVF-GSTVPI--LTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 187 G~~~~~~~l~~l~~~~~~-----~~~~~i~D~ay~~~~~~~~~~~~~-~~~-~~~~~~--i~~~S~sK~~~~~G~r~G~i 257 (343)
|.+++.+++++|+++|++ |++++|+||+|.++.|++....++ ..+ +..+++ ++++|+||.|+++|+|+||+
T Consensus 160 G~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~ 239 (388)
T PRK08637 160 GYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFI 239 (388)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEE
Confidence 999999999999999875 899999999999999877544332 222 334564 45679999999999999999
Q ss_pred EEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhhHHHHH----HHHHHHHHHHHHHHhhcCC---
Q 019298 258 VTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTIMQIMI----HGNFLENFAGSCVPSYKLI--- 325 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~~~~l~----~~~~~~~~~~~~~~~L~~~--- 325 (343)
++++... .++++++.+... ....++++.+.|.++ ..+|.+. .+.+ .+..++++++.+.+.|+..
T Consensus 240 ~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~-~~~l~~~-~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~ 315 (388)
T PRK08637 240 TFGTKAG--SSQTVKEALEKKVKGLIRSNISNGPHPSQSAV-LRALNSP-EFDKEKQEKFQILKERYEKTKEVLYDGKYD 315 (388)
T ss_pred EEccccC--CcHHHHHHHHHHHHHHhhcccCCCCcHHHHHH-HHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 9753100 124567666532 112347788999999 7777653 3433 5566888888888888664
Q ss_pred CCceeeCCCCceEeeecC
Q 019298 326 PELINFKSTGSSLKYLDL 343 (343)
Q Consensus 326 ~g~~~~~~~~g~~~~~~l 343 (343)
+++.+..|++|+|+|+++
T Consensus 316 ~~~~~~~~~~g~~~~~~l 333 (388)
T PRK08637 316 DAWQAYPFNSGYFMCLKL 333 (388)
T ss_pred CCcccccccceEEEEecC
Confidence 257777889999999975
No 84
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=5.9e-40 Score=300.67 Aligned_cols=274 Identities=16% Similarity=0.184 Sum_probs=226.1
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
++.++|+.|++ .+++++.+.+++.+.+.. ...|++. +.++||+++++++ ++++++|++|+|++++|.
T Consensus 43 ~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai~ 109 (370)
T PRK09105 43 EGAVFLNANEC----PLGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE------GLPADHVMAYAGSSEPLN 109 (370)
T ss_pred CCcEEecCCCC----CCCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh------CcChhhEEEcCChHHHHH
Confidence 45799999984 478899999999887653 3468875 4899999999987 578999999999999999
Q ss_pred HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
.++.+++++||+|++++|+|..|...++..|.+++.++++. ++.+|++++++. .++++++++|+||||||.+++.++
T Consensus 110 ~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~ 186 (370)
T PRK09105 110 YAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRAD 186 (370)
T ss_pred HHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHH
Confidence 99999999999999999999999999999999999998753 467899999876 456889999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
++++++.++ +++++|+||+|..+... .......+..+++++++||||+||++|+|+||++++ ++++++
T Consensus 187 l~~l~~~~~-~~~~lIvDEaY~~f~~~---~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~--------~~~i~~ 254 (370)
T PRK09105 187 IEWLLANKP-AGSVLLVDEAYIHFSDA---PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR--------PDLLAK 254 (370)
T ss_pred HHHHHHhCC-CCcEEEEECchHHhccC---cchHHHHhhCCCEEEEecccHhhcCCccceeeeecC--------HHHHHH
Confidence 999999764 58999999999876532 111111233568999999999999999999999985 368888
Q ss_pred HhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
++.. . ...++...|.++ .++|.+ .+|++ .+++++++++.+.+.|+++ |+.+..+++++| |++
T Consensus 255 l~~~-~-~~~~~~~~~~aa-~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~~f~-~~~ 317 (370)
T PRK09105 255 LARF-G-HNPLPVPAAAAG-LASLRD-PKLVPQRRAENAAVREDTIAWLKKK-GYKCTPSQANCF-MVD 317 (370)
T ss_pred HHhc-C-CCCcCHHHHHHH-HHHHhC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCCcEE-EEe
Confidence 8766 2 345677777777 666766 45665 7889999999999999988 888767777766 454
No 85
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=6.3e-40 Score=306.53 Aligned_cols=295 Identities=18% Similarity=0.259 Sum_probs=216.9
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH-HHHhhhCCCC-CCCC--cEEEecChH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA-EYLSRDLPYK-LTPN--DVFVTSGCT 110 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia-~~~~~~~~~~-~~~~--~i~~~~g~~ 110 (343)
.+.|+|++|+|+ ++++ .+..++.+++.. .+|+++.|...++++++ +|+.+.++.. ..++ +|++|+|++
T Consensus 94 ~~~i~l~~g~p~----~~~~-~~~~~~~~~~~~---~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat 165 (521)
T TIGR03801 94 RDIISYVIDQLG----FDPD-AFLYEMCDGIIG---DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGT 165 (521)
T ss_pred HHHHhhcCCCCC----CCCC-HHHHHHHHHhhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHH
Confidence 356899999965 6654 444555555432 26987778888888877 5666554433 3444 899999999
Q ss_pred HHHHHHHHH-----hcCCCCeEEEeCCCCcchHHHHHhc--CceeEEeecCCCCC-----CCCCHHHHHhhhcCCceEEE
Q 019298 111 QAIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFR--HIEVRHFDLLPDKG-----WEVDLDDIESLADQNTVALV 178 (343)
Q Consensus 111 ~al~~~~~~-----l~~~gd~vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~-----~~~d~~~l~~~~~~~~~~i~ 178 (343)
+++..++.+ +++|||+|++++|+|+.|...+... |.+++.++.+++++ |.+|.+++++++++++++++
T Consensus 166 ~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~ 245 (521)
T TIGR03801 166 AAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALF 245 (521)
T ss_pred HHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEE
Confidence 999999887 6899999999999999999887776 66777777654433 88999999998888899999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHhhc--CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298 179 IINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (343)
Q Consensus 179 ~~~p~nptG~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 256 (343)
+++||||||.+++.+++++|+++|++| +++||+||+|+.|.+. +.++... ..+++|+++||||.|+++|+|+||
T Consensus 246 l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~ 321 (521)
T TIGR03801 246 VVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FRSLFAE-LPYNTIGVYSFSKYFGATGWRLGT 321 (521)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---ccchhhh-CCCCEEEEEcchhhccCchhhhhh
Confidence 999999999999999999999999986 9999999999998752 2232222 125899999999999999999999
Q ss_pred EEEeCCCCC---CC--chHHHHHH------------------------hhhh-ccccCcchHHHH--H--HHhccchhhH
Q 019298 257 FVTTDPCGM---FR--KPKVVERM------------------------KKYF-DILGDPATFIQV--C--IMYGCLSTIM 302 (343)
Q Consensus 257 i~~~~~~~~---~~--~~~~~~~l------------------------~~~~-~~~~~~~~~~~~--a--~~~~~l~~~~ 302 (343)
+++++.... .. .++..+.+ ++.. +...+++.+.|. + +..++|....
T Consensus 322 i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~ 401 (521)
T TIGR03801 322 IALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKEN 401 (521)
T ss_pred hhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccch
Confidence 998642100 00 00111112 2222 234556666665 3 2245666555
Q ss_pred HHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 303 QIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 303 ~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.+ .++.++++++.+.+.| .+ .+....|+||+|+|+++
T Consensus 402 ~y~~~~~~~~~~R~~~l~~~L-g~-~~~~~~~~g~~Y~~~di 441 (521)
T TIGR03801 402 AYKAETKDICRRREKLLFRGL-GL-PLQEDPNDVAYYTLIDL 441 (521)
T ss_pred hHHHHHHHHHHHHHHHHHHhc-CC-CCcCCCCCeEEEEEeeh
Confidence 6666 8889999999999888 22 23345789999999975
No 86
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-39 Score=295.52 Aligned_cols=277 Identities=19% Similarity=0.322 Sum_probs=228.7
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
...++|+.|++ .+++++.+.+++++.+.......|++. +.+++|+++|+++ ++++++|++|+|+++++.
T Consensus 22 ~~~~~l~~~~~----~~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l~ 90 (351)
T PRK14807 22 PYKYKMDANET----PFELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEIIH 90 (351)
T ss_pred CceeEccCCCC----CCCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHHH
Confidence 45689999995 478899999999988765556788864 5699999999998 578899999999999999
Q ss_pred HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHH
Q 019298 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~ 193 (343)
.++++++++||+|++++|+|..+...++..|.+++.++++ +++.+|++.++++++. +++++++++||||||.+++.+
T Consensus 91 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~ 168 (351)
T PRK14807 91 LIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIERE 168 (351)
T ss_pred HHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999999875 3467999999999875 789999999999999999998
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++.++++ +++.++|+||+|.++. + ....+ .....+++|+++||||.|+++|+|+||++++ +++++
T Consensus 169 ~l~~l~~---~~~~~~ivDe~y~~~~-~-~~~~~--~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~--------~~~~~ 233 (351)
T PRK14807 169 DIIKIIE---KSRGIVVVDEAYFEFY-G-NTIVD--VINEFENLIVLRTLSKAFGLAGLRVGYAVAN--------ENILK 233 (351)
T ss_pred HHHHHHH---hCCCEEEEeCcchhhc-c-cchHH--HhhhCCCEEEEecchHhcccchhceeeeecC--------HHHHH
Confidence 8877765 5567899999998863 2 22212 1234468999999999999999999999984 47888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.++.... .+..+.+.|.++ ..+|++ ..+.+.++.++++++.+.+.|++++|+.+ .|.+|+|+|+++
T Consensus 234 ~~~~~~~-~~~~~~~~q~~~-~~~l~~-~~~~~~~~~~~~~r~~l~~~l~~~~g~~~-~~~~~~~~~i~~ 299 (351)
T PRK14807 234 YLNLVKS-PYNINSLSQVIA-LKVLRT-GVLKERVNYILNERERLIKELSKIPGIKV-YPSKTNFILVKF 299 (351)
T ss_pred HHHHccC-CCCcCHHHHHHH-HHHHhH-HHHHHHHHHHHHHHHHHHHHHHhCCCcEE-CcCCccEEEEEc
Confidence 8877654 356788889888 666664 33444777888999999999988888877 567788999875
No 87
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-39 Score=298.43 Aligned_cols=275 Identities=16% Similarity=0.205 Sum_probs=230.4
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~ 115 (343)
..++|+.|++ ++++++.+.+++.+.... ...|+++ +.++||+++|+++ ++++++|++|+|++++|..
T Consensus 33 ~~~~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~l~~ 99 (369)
T PRK08153 33 FRARIGANES----GFGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGLLGL 99 (369)
T ss_pred ceeEecCCCC----CCCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHHHHH
Confidence 4469999994 488899999999887642 3579876 5799999999998 5788999999999999999
Q ss_pred HHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh-cCCceEEEEeCCCCCcccccCHHH
Q 019298 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 116 ~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
++.+++++||.|+++.|+|+.+...+...|.+++.++++. ..+|++++++.+ +++++++++++||||||.+++.++
T Consensus 100 ~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~---~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~ 176 (369)
T PRK08153 100 IVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRD---DREDLDALLDAARRENAPLVYLANPDNPMGSWHPAAD 176 (369)
T ss_pred HHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCC---CCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHH
Confidence 9999999999999999999999988888999999998743 257899988766 457889999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
+++++++|++ ++++|+||+|..+.+++. ..++. ...+++++++||||+||++|+|+||++++ +++++.
T Consensus 177 l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~--~~~~~~i~~~SfSK~~g~~GlRiG~~v~~--------~~~~~~ 244 (369)
T PRK08153 177 IVAFIEALPE-TTLLVLDEAYCETAPAGA-APPID--TDDPNVIRMRTFSKAYGLAGARVGYAIGA--------PGTIKA 244 (369)
T ss_pred HHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhh--hcCCCEEEEecchHhccCcchheeeeecC--------HHHHHH
Confidence 9999999874 999999999999887543 22222 12458999999999999999999999985 368888
Q ss_pred HhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+... .++++++.|.++ ..+|.+ .++++ .++.++++++.+.+.|+.. |+.+ .|++|+|+|+++
T Consensus 245 l~~~~~-~~~~s~~~q~~~-~~~l~~-~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~-~p~~~~f~~~~~ 309 (369)
T PRK08153 245 FDKVRN-HFGMNRIAQAAA-LAALKD-QAYLAEVVGKIAAARDRIAAIARAN-GLTP-LPSATNFVAIDC 309 (369)
T ss_pred HHHhhc-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCcc-CCCcCcEEEEEC
Confidence 877665 457889999998 677765 45565 8888999999999999887 7765 578999999864
No 88
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=7.1e-40 Score=299.26 Aligned_cols=281 Identities=20% Similarity=0.282 Sum_probs=234.0
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
..+|+|+.+.+. +++++.+.+++.+.+.. ...|++ .|.+++|+++++++ ++++++|++++|+++++.
T Consensus 22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~-~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~ 88 (352)
T PRK03321 22 PGAIKLSSNETP----FGPLPSVRAAIARAAAG--VNRYPD-MGAVELRAALAEHL------GVPPEHVAVGCGSVALCQ 88 (352)
T ss_pred ccceeccCCCCC----CCCCHHHHHHHHHHHHh--cCcCCC-CcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHH
Confidence 468999999954 67788999999887653 457864 79999999999999 467889999999999999
Q ss_pred HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
.++..++++||+|+++.|+|..|...++..|.+++.+++++ ++++|++.+++.++++++++++++||||||.+++.++
T Consensus 89 ~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~ 166 (352)
T PRK03321 89 QLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTP--DHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAE 166 (352)
T ss_pred HHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCC--CCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHH
Confidence 99999999999999999999998888899999999998764 3578999999999888999999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
+.++++.+ ++++++|+||+|.++.+++.....+......+++++++||||.||++|+|+||++++ +++++.
T Consensus 167 l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~--------~~~~~~ 237 (352)
T PRK03321 167 LARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH--------PEVIAA 237 (352)
T ss_pred HHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC--------HHHHHH
Confidence 99999876 469999999999999886643333344445578999999999999999999999985 368888
Q ss_pred HhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++... .++.+.++|.++ .++|.....+.+.++.+.++++.+.+.|+.. |+.+ .+.+|+|+|+++
T Consensus 238 ~~~~~~-~~~~s~~~q~~a-~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~-~~~~g~~i~i~l 302 (352)
T PRK03321 238 LRKVAV-PFSVNSLAQAAA-IASLAAEDELLERVDAVVAERDRVRAALRAA-GWTV-PPSQANFVWLPL 302 (352)
T ss_pred HHHhcC-CCCCCHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCcc-CCCCCCEEEEeC
Confidence 876643 567788888877 5666655666666677777788899999887 7765 456789999874
No 89
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-39 Score=297.53 Aligned_cols=275 Identities=17% Similarity=0.278 Sum_probs=225.9
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
..++|+|+.|++ .+++++.+.+++++.+.+. ...|++. +.++||+++|+++ ++++++|++|+|++++|
T Consensus 23 ~~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al 90 (353)
T PRK05387 23 LAKLIKLNTNEN----PYPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL 90 (353)
T ss_pred ccceeeccCCCC----CCCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence 357899999994 3777889999998877643 4679765 6699999999998 47899999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++++++++||+|++++|+|+.|...++..|.+++.++++ +++.+|++++++ .++++++++||||||.+++.+
T Consensus 91 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~ 164 (353)
T PRK05387 91 AHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLA 164 (353)
T ss_pred HHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999875 357799999874 357889999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++++|++.++ ++++|+||+|..+. +....+ .....+++++++||||.|+++|+|+||++++ +++++
T Consensus 165 ~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~--~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~--------~~~~~ 230 (353)
T PRK05387 165 EIERILAANP--DSVVVIDEAYVDFG--GESAIP--LIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH--------PELIE 230 (353)
T ss_pred HHHHHHHhCC--CcEEEEeCcccccC--CcchHH--HHhhCCCEEEEEehhHhhcchhhhceeeecC--------HHHHH
Confidence 9999998654 89999999998753 322112 2233468999999999999999999999984 46888
Q ss_pred HHhhhhcc--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDI--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++..... .++++.+.|.++ ..++.+...+-+.+++++++++.+.+.|+++ |+.+ .|.+|+|+|+++
T Consensus 231 ~l~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~ 299 (353)
T PRK05387 231 ALNRVKNSFNSYPLDRLAQAGA-IAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEV-LPSKANFVFARH 299 (353)
T ss_pred HHHHhhccCCCCCcCHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeE-CCCcCcEEEEEC
Confidence 88776542 346778888888 6667653333348888999999999999988 7876 577889999864
No 90
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-39 Score=294.38 Aligned_cols=274 Identities=18% Similarity=0.278 Sum_probs=220.8
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~ 115 (343)
..+.++..+ +.+++++.. ...+..|+++ +.++||+++++++ ++++++|++|+|++++|..
T Consensus 32 ~~~~~~~ne----~~~~~~~~~---------~~~~~~Y~~~-~~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~ 91 (364)
T PRK04781 32 GDVWLNANE----SAWANPADP---------DASTRRYPDP-QPPGLRSALAALY------GCAPEQLLIGRGSDEAIDL 91 (364)
T ss_pred CCEEeeCCC----CCCCCChhh---------cchhccCCCC-CHHHHHHHHHHHh------CcChHHEEEeCCHHHHHHH
Confidence 457787776 335555421 1124679875 4699999999998 5689999999999999999
Q ss_pred HHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCC-CCCCCCCHHHHHhhh-cCCceEEEEeCCCCCcccccCH
Q 019298 116 AMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 116 ~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~-~~~~~~i~~~~p~nptG~~~~~ 192 (343)
++++++.+| |+|++++|+|..|...++..|.+++.+++.. ++++.+|++++++.. +++++++++++||||||.+++.
T Consensus 92 ~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~ 171 (364)
T PRK04781 92 LVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIAL 171 (364)
T ss_pred HHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCH
Confidence 999999888 7999999999999988899999999999853 356778999986544 5688999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
++++++++.|++ ++++|+||+|.+|.+... ........+++|+++||||+||++|+|+||++++ ++++
T Consensus 172 ~~~~~l~~~~~~-~~~iI~Deay~~f~~~~~---~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~--------~~l~ 239 (364)
T PRK04781 172 DQIERALQALQG-KALVVVDEAYGEFSDVPS---AVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN--------AELI 239 (364)
T ss_pred HHHHHHHHhCCC-CcEEEEeCcchhhcCCcc---hHHHHhhCCCEEEEecChhhcccccceeeeeeCC--------HHHH
Confidence 999999999864 789999999999875321 1222344578999999999999999999999985 4788
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+++... .++.+.+.|.++ ..+|.+. ....+.++.++++|+.+.+.|+.++|+....|++|+|+|+++
T Consensus 240 ~~l~~~~~-~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~ 310 (364)
T PRK04781 240 AVLRRCQA-PYPVPTPCAALA-EQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRF 310 (364)
T ss_pred HHHHhccC-CCCCCHHHHHHH-HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEc
Confidence 98888765 456778888877 5677653 233346678899999999999998887644789999999975
No 91
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=5.5e-39 Score=295.06 Aligned_cols=280 Identities=16% Similarity=0.244 Sum_probs=233.5
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.++++|+.+.+. +++++.+++++.+.... ...|++.. ..++|+++++++ ++++++|++|+|+++++
T Consensus 31 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 97 (367)
T PRK02731 31 IADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEIL 97 (367)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence 6678999999843 56788899999887653 46898754 479999999998 56789999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++.+++++||+|++++|+|..+...+...|.+++.++. +++.+|++.+++.++++++++++++||||||.+++.+
T Consensus 98 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 174 (367)
T PRK02731 98 ELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAE 174 (367)
T ss_pred HHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHH
Confidence 9999999999999999999999998888889999998876 4577999999999988889999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
+++++++.|+ +++++|+||+|..+.+++.....+......+++++++||||.||++|+|+||++++ +++++
T Consensus 175 ~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~--------~~~~~ 245 (367)
T PRK02731 175 EVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP--------PEIID 245 (367)
T ss_pred HHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC--------HHHHH
Confidence 9999999885 69999999999998876543333333344568999999999999999999999985 36888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++.... .+..+.++|.++ ..++++ ..+++ .++.++++++.+.+.|+++ |+.+. |.+|+|+|+++
T Consensus 246 ~l~~~~~-~~~~~~~~~~~a-~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~ 311 (367)
T PRK02731 246 ALNRVRQ-PFNVNSLALAAA-VAALDD-DAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDF 311 (367)
T ss_pred HHHHccC-CCCCCHHHHHHH-HHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEEC
Confidence 8877654 345677888888 666665 34544 7888899999999999988 78764 66789999874
No 92
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.4e-39 Score=290.13 Aligned_cols=272 Identities=17% Similarity=0.229 Sum_probs=218.4
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
.+.+.++|+.|++ .+++++.+++++.+++.....+.|+++ |.++||+++++++++.+ +++++|++|+|++++
T Consensus 17 ~~~~~i~l~~~~~----~~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~ 88 (335)
T PRK14808 17 EKRDRTYLALNEN----PFPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEI 88 (335)
T ss_pred CCCceeEecCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHH
Confidence 3678899999994 488999999999887765445568764 89999999999996532 789999999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
|..+++.+ |.|++++|+|..|...++..|.+++.++++.+ +.++... + ..++++++++||||||.+++.
T Consensus 89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~ 157 (335)
T PRK14808 89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN----V-GEGDVVFIPNPNNPTGHVFER 157 (335)
T ss_pred HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH----c-cCCCEEEEeCCCCCCCCCcCH
Confidence 99999887 67999999999999999999999999988643 3444332 2 246889999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
+++++|+ ++++++|+||+|.+|. +....+ .....+++++++||||+|+++|+|+||++++ ++++
T Consensus 158 ~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~--~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~--------~~~~ 221 (335)
T PRK14808 158 EEIERIL----KTGAFVALDEAYYEFH--GESYVD--LLKKYENLAVIRTFSKAFSLAAQRIGYVVSS--------EKFI 221 (335)
T ss_pred HHHHHHH----hcCCEEEEECchhhhc--CCchHH--HHHhCCCEEEEEechhhccCcccceEEEEeC--------HHHH
Confidence 9998886 4799999999999974 222211 1233458999999999999999999999985 3688
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++.+... .++.+.++|.++ ..++++...+.+.++.++++++.+.+.|+.+ |+.+..+ .|.|+|+++
T Consensus 222 ~~l~~~~~-~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~-~g~f~~~~l 288 (335)
T PRK14808 222 DAYNRVRL-PFNVSYVSQMFA-KVALDHREIFEERTKFIVEERERMKSALREM-GYRITDS-RGNFVFIFM 288 (335)
T ss_pred HHHHHhcC-CCCCCHHHHHHH-HHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCC-CCeEEEEeC
Confidence 88877663 456788888888 7777764444457788888899999999988 7877555 567889864
No 93
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.7e-39 Score=289.48 Aligned_cols=271 Identities=20% Similarity=0.271 Sum_probs=220.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+...++|+.+++ .+++++.+.+++.+++.......|++ .|.+++|+++++++ ++++++|++|+|+++++
T Consensus 17 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l 85 (337)
T PRK03967 17 GNYRIWLDKNEN----PFDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFY------GLDAENIAVGNGSDELI 85 (337)
T ss_pred CCceEEecCCCC----CCCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHh------CcCcceEEEcCCHHHHH
Confidence 346799999994 47888999999998876545678975 68999999999999 47899999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++..+ +||+|++++|+|..|...++..|.+++.++++ .++.+|++.+++.. .+++++++++||||||.+++.+
T Consensus 86 ~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~ 160 (337)
T PRK03967 86 SYLVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEE 160 (337)
T ss_pred HHHHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHH
Confidence 9988776 79999999999999988889999999999875 34779999998865 4678888999999999999988
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++.+++ ++++++|+||+|.++... ...+ .....+++|+++||||+|+++|+|+||++++ +++++
T Consensus 161 ~l~~i~----~~~~~ii~De~y~~~~~~--~~~~--~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~--------~~~i~ 224 (337)
T PRK03967 161 EILKVL----ETGKPVVLDEAYAEFSGK--SLIG--LIDEYPNLILLRTFSKAFGLAGIRAGYAIAN--------EEIID 224 (337)
T ss_pred HHHHHH----hcCCEEEEECchhhhccc--chHH--HHhhCCCEEEEecchHhhcchhhhheeeecC--------HHHHH
Confidence 777665 369999999999987522 1111 1233468999999999999999999999985 46888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++... .++.+.++|.++ ..+|++...+.+.++.+.++|+.+.+.|.++ ..|++|+|+|+++
T Consensus 225 ~~~~~~~-~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~ 287 (337)
T PRK03967 225 ALYRIKP-PFSLNILTMKIV-RLALDHYDLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLLKL 287 (337)
T ss_pred HHHhhcC-CCCCCHHHHHHH-HHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhH
Confidence 8887765 456788999998 7777764444446677778888888888764 2578999999874
No 94
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-39 Score=295.33 Aligned_cols=272 Identities=21% Similarity=0.293 Sum_probs=221.1
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~ 115 (343)
..++|+.++ +.+++++.+ .....+.|++. ...++++.+++++ ++++++|++|+|++++|..
T Consensus 29 ~~~~l~~Ne----np~~~~~~~--------~~~~~~~Yp~~-~~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~~ 89 (351)
T PRK01688 29 GDVWLNANE----YPTAVEFQL--------TQQTLNRYPEC-QPKAVIENYAAYA------GVKPEQVLVSRGADEGIEL 89 (351)
T ss_pred CceEecCCC----CCCCCChhh--------cccccccCCCC-ChHHHHHHHHHHh------CCCHHHEEEcCCHHHHHHH
Confidence 469999998 346666543 11235679875 3589999999998 6799999999999999999
Q ss_pred HHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 116 AMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 116 ~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
++++++++| |.|+++.|+|..|...++..|.+++.+++++ ++.+|++++++++ ++++++++||||||||..++.++
T Consensus 90 ~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~ 166 (351)
T PRK01688 90 LIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQD 166 (351)
T ss_pred HHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHH
Confidence 999999887 8999999999999999999999999998853 4789999999887 57899999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
+++|++.|++ +.++|+||+|.+|.... . ....+...+++++++||||+||++|+|+||++++ +++++.
T Consensus 167 l~~l~~~~~~-~~~vivDEay~~f~~~~-s--~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~--------~~~i~~ 234 (351)
T PRK01688 167 LRTLLELTRG-KAIVVADEAYIEFCPQA-S--LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLAN--------EEVINL 234 (351)
T ss_pred HHHHHHhCCC-CcEEEEECchhhcCCCC-C--hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCC--------HHHHHH
Confidence 9999999986 68899999999986321 1 1122344568999999999999999999999984 478888
Q ss_pred HhhhhccccCcchHHHHHHHhccchhh-HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 275 MKKYFDILGDPATFIQVCIMYGCLSTI-MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 275 l~~~~~~~~~~~~~~~~a~~~~~l~~~-~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++... .++++.+.+.++ ..+|.+. .++++ .++.+.++|+.+.+.|+.++++....|++|+|+|+++
T Consensus 235 l~~~~~-~~~v~~~~~~~a-~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~ 303 (351)
T PRK01688 235 LLKVIA-PYPLSTPVADIA-AQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARF 303 (351)
T ss_pred HHhccC-CCCCCHHHHHHH-HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEc
Confidence 887764 355677777666 5566542 24554 7788889999999999998777645788999999864
No 95
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-39 Score=277.29 Aligned_cols=264 Identities=26% Similarity=0.397 Sum_probs=233.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhhhCC--CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc-C
Q 019298 69 KFNGYAPTAGLPLTRRAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR-H 145 (343)
Q Consensus 69 ~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g 145 (343)
....|.+..|.+.+|+++|+|+.+.+| ...+|++++++.|++.++.+++..|.+|||..++|.|.|+++..-++.. |
T Consensus 113 ~la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTg 192 (471)
T KOG0256|consen 113 ELAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTG 192 (471)
T ss_pred hHhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccC
Confidence 345788888999999999999998665 4578999999999999999999999999999999999999998766654 8
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+++++.+..++++.++.+++|+++.+ +.+.++++||+||.|.+++++++..++++++++|+++|+||+|+..+
T Consensus 193 veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sV 272 (471)
T KOG0256|consen 193 VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSV 272 (471)
T ss_pred ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence 899999999999999999999987753 67889999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccccC-----CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHH
Q 019298 220 FGDKPFVPMGVFG-----STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIM 294 (343)
Q Consensus 220 ~~~~~~~~~~~~~-----~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~ 294 (343)
|+...+.++.++. ..+++.+++|+||.||+||+|+|.+..-+ ..++...+++.. ++.+++..|..+
T Consensus 273 F~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~n-------e~VvsaA~kmss-f~~vSs~tQ~~l- 343 (471)
T KOG0256|consen 273 FDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNN-------EDVVSAATKMSS-FGLVSSQTQYLL- 343 (471)
T ss_pred cCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecC-------hHHHHHHHHHhh-ccCCcHHHHHHH-
Confidence 9988777655542 34579999999999999999999999864 457887777765 678899999999
Q ss_pred hccchhhHHHHH-----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 295 YGCLSTIMQIMI-----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 295 ~~~l~~~~~~l~-----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
..+|++ .+|.+ ..++++.+..++.+.|+++ |++++..++|+|+|+||
T Consensus 344 a~LLSD-~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvDl 395 (471)
T KOG0256|consen 344 ASLLSD-EEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVDL 395 (471)
T ss_pred HHHhch-HHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceeecCCeeEEEEEh
Confidence 888887 55555 8888999999999999999 99999999999999986
No 96
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=3.9e-38 Score=287.24 Aligned_cols=280 Identities=21% Similarity=0.351 Sum_probs=232.4
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.++|||++|++ .+++++.+++++.++... ...|+++.+ +++|+++++++ ++++++|++++|+++++
T Consensus 18 ~~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~------~~~~~~i~~~~G~~~~l 84 (346)
T TIGR01141 18 GKEVIKLNSNEN----PFGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYY------GVDPEQILLGNGSDEII 84 (346)
T ss_pred CCceEEccCCCC----CCCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHh------CcChHHEEEcCCHHHHH
Confidence 468999999995 377889999999987642 357887665 99999999999 46789999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++++++++||+|++++|+|+.+...++..|.+++.++++.+ +.+|++++++.++++++++++++|+||||.+++.+
T Consensus 85 ~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~ 162 (346)
T TIGR01141 85 ELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRS 162 (346)
T ss_pred HHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999988888999999999987643 66899999998887899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
+++++++.++ +++++|+|++|..+...+.. .......+++++++|+||.|+++|+|+||++++ +++++
T Consensus 163 ~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~---~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~ 230 (346)
T TIGR01141 163 DIEAVLERTP-EDALVVVDEAYGEFSGEPST---LPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN--------AEIID 230 (346)
T ss_pred HHHHHHHhCC-CCcEEEEECchhhhcCCccH---HHHHhhCCCEEEEehhhHhhhchhhhceeeecC--------HHHHH
Confidence 9999999987 79999999999976643221 111223347899999999999999999999984 36888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++.... .++.++++|.++ ..++++...+.+.+++++++++.+.+.|++++|+.+ .|.+|+|+|+++
T Consensus 231 ~~~~~~~-~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~g~~~~~~~ 297 (346)
T TIGR01141 231 ALNKVRA-PFNLSRLAQAAA-IAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEV-YPSDANFVLIRF 297 (346)
T ss_pred HHHhccC-CCCCCHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE-CCCcCCEEEEec
Confidence 8877654 356678888887 666766443334889999999999999998888885 566789999864
No 97
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-37 Score=281.38 Aligned_cols=271 Identities=20% Similarity=0.263 Sum_probs=217.8
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
..+.+||+.++ +.+++++.+++++.+.+.+ ...|+++.|.+++|+++++++ ++++++|++|+|+++++
T Consensus 21 ~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al 88 (349)
T PRK07908 21 GPGLLDFAVNV----RHDTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGF 88 (349)
T ss_pred CCCeEEecCCC----CCCCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 67899999999 4477889999999988753 457998889999999999998 56899999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..+++ + ++| .+++..|+|..+...++..|.+++.++++.+ +.+|++.+ +++++++++++||||||.+++.+
T Consensus 89 ~~~~~-l-~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~--~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~ 159 (349)
T PRK07908 89 ALLAR-L-RPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDPP--FRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE 159 (349)
T ss_pred HHHHh-c-CCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCcc--cCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH
Confidence 99988 4 564 6677899999999999999999999988643 67888865 34678999999999999999987
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++.++ |+ ++.++|+||+|.++..+ . ..++... ..+++++++||||.|+++|+|+||++++ +++++
T Consensus 160 ~l~~l---~~-~~~~iIvDe~y~~~~~~-~-~~~l~~~-~~~~~i~i~S~SK~~~l~GlRiG~~~~~--------~~~~~ 224 (349)
T PRK07908 160 QLLAL---RR-PGRILVVDEAFADAVPG-E-PESLAGD-DLPGVLVLRSLTKTWSLAGLRVGYALGA--------PDVLA 224 (349)
T ss_pred HHHHH---Hh-cCCEEEEECcchhhccC-C-ccccccc-cCCCEEEEeecccccCCccceeeeeecC--------HHHHH
Confidence 66555 54 47889999999987543 2 2333332 3357999999999999999999999984 46888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++.... .+..++..+.++ .+++.. ...+++ .+++++++++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus 225 ~~~~~~~-~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~ 293 (349)
T PRK07908 225 RLTRGRA-HWPVGTLQLEAI-AACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRV 293 (349)
T ss_pred HHHhcCC-CCCccHHHHHHH-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEEC
Confidence 8876654 345666667666 555542 223444 8889999999999999988 88887889999999975
No 98
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.3e-37 Score=279.98 Aligned_cols=262 Identities=17% Similarity=0.172 Sum_probs=204.0
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~ 115 (343)
.+++|+.++ ++++. ....+.|+.+ ...+||+++++++ ++++++|++|+|++++|..
T Consensus 17 ~~i~l~~Ne----np~~~-------------~~~~~~Yp~~-~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~ 72 (332)
T PRK06425 17 RIIDFSANI----NDFMD-------------IGDISIYPEI-SYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYR 72 (332)
T ss_pred CEEEecccc----CCCcC-------------hhhcccCcCc-CHHHHHHHHHHHh------CCCcceEEECCCHHHHHHH
Confidence 679999998 33321 1124579764 5799999999999 5789999999999999999
Q ss_pred HHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHH
Q 019298 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195 (343)
Q Consensus 116 ~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l 195 (343)
+++ ++++| .|++++|+|+.|...++..|.+++.++++. +.+|.+.+++ .+++++++|+||||||.+++.+++
T Consensus 73 ~~~-~~~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~ 144 (332)
T PRK06425 73 LLS-YINVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSL 144 (332)
T ss_pred HHH-HhCCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHH
Confidence 997 45776 566779999999999999999999998853 3456665553 378899999999999999999999
Q ss_pred HHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHH
Q 019298 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM 275 (343)
Q Consensus 196 ~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l 275 (343)
++|+++|+++++++|+||+|.++.+++. ..........+++|+++||||+|+++|+|+||++++ +++++.+
T Consensus 145 ~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~--------~~li~~l 215 (332)
T PRK06425 145 LTISEICRKKGALLFIDEAFIDFVPNRA-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD--------DYNMKIS 215 (332)
T ss_pred HHHHHHHHHcCCEEEEecchhccccccc-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC--------HHHHHHH
Confidence 9999999999999999999999986542 112222234468999999999999999999999985 3688888
Q ss_pred hhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 276 KKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 276 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++... .+..+..++.++ .. . ....+++ .++.++++|+.+.+.|+++ |+.+..+.+|+|+|+++
T Consensus 216 ~~~~~-~~~~~~~~~~~l-~~-~-~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~ 279 (332)
T PRK06425 216 RKITE-PWSVCDPAIDFI-RS-I-DLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMI 279 (332)
T ss_pred HHcCC-CCccCHHHHHHH-HH-h-hhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEc
Confidence 77654 233444443333 11 1 1133443 7889999999999999998 78775567889999864
No 99
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-37 Score=283.24 Aligned_cols=270 Identities=19% Similarity=0.295 Sum_probs=214.2
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
.+.++|+.+++ .+++++.+ . . ...+.|++. +.++||+++|+++ ++++++|++|+|++++|.
T Consensus 31 ~~~~~l~~ne~----~~~~~~~~-----~-~--~~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i~ 91 (354)
T PRK04635 31 RGDIWINANES----PFNNEYKL-----D-L--ARLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAIE 91 (354)
T ss_pred CCcEEeeCCCC----CCCCChhh-----h-h--HHhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHHH
Confidence 45699999984 35555533 1 1 124679885 5799999999998 679999999999999999
Q ss_pred HHHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 115 VAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 115 ~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
.++++++++| |+|+++.|+|..|...++..|.+++.++++. ++.+|.+.++. + ++++++++|+||||||.+++.+
T Consensus 92 ~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~ 167 (354)
T PRK04635 92 LLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRA 167 (354)
T ss_pred HHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHH
Confidence 9999999998 9999999999999999999999999998853 46789988873 3 5789999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++++|++.|+ ++++|+||+|.++.... .... .....+++++++||||+||++|+|+||++++ +++++
T Consensus 168 ~l~~l~~~~~--~~~vivDeay~~~~~~~-s~~~--~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~--------~~~~~ 234 (354)
T PRK04635 168 DIEQLIEMTP--DAIVVVDEAYIEFCPEY-SVAD--LLASYPNLVVLRTLSKAFALAGARCGFTLAN--------EELIE 234 (354)
T ss_pred HHHHHHHhCC--CcEEEEeCchHhhccCc-chHH--HHhhCCCEEEEechHHHhhhhHHHHhhhhCC--------HHHHH
Confidence 9999999887 49999999999876331 1111 1233468999999999999999999999884 46888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhh-HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTI-MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~-~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+..... .++.+...|.++ .++|.+. .++++ .++.++++|+.+.+.|++++++.+.++ +|+|+|+++
T Consensus 235 ~l~~~~~-~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~ 303 (354)
T PRK04635 235 ILMRVIA-PYPVPLPVSEIA-TQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG-NGNYVLAKF 303 (354)
T ss_pred HHHhhcC-CCCCCHHHHHHH-HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC-CCcEEEEEC
Confidence 8876544 345666677666 5555432 23333 778899999999999999866776544 578999864
No 100
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.9e-36 Score=273.75 Aligned_cols=255 Identities=15% Similarity=0.167 Sum_probs=199.5
Q ss_pred cceeEeccCCCCCCCCCCCc-HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTT-HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
.++|+|+.++. +++++ +.+.+ .. ...|+.. ..+||+++++++ .+++|++|+|++++|
T Consensus 20 ~~~i~l~~ne~----p~~~~~~~~~~---~~-----~~~yp~~--~~~Lr~~ia~~~--------~~~~I~it~Gs~~al 77 (330)
T PRK05664 20 ADWLDLSTGIA----PWPWPVPAIPA---DA-----WARLPET--DDGLEAAARAYY--------GAPQLLPVAGSQAAI 77 (330)
T ss_pred HHheeecCCcC----CCCCCCcccCH---HH-----HHhCCCC--hHHHHHHHHHHh--------CCCCEEECcCHHHHH
Confidence 46799999972 23333 22221 12 2348653 489999999998 358999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++. +.+||+|++++|+|+.|...++..|.+++.+++ +.+++.++ +++++++++||||||.+++.+
T Consensus 78 ~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~----------~~~~~~~~-~~~~v~l~nP~NPTG~~~s~~ 144 (330)
T PRK05664 78 QALPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE----------AEVEAALD-SLDVLVVVNPNNPTGRRFDPA 144 (330)
T ss_pred HHHHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEech----------hhHhhhhc-CCCEEEEeCCcCCCCCccCHH
Confidence 98863 579999999999999999999999999998865 23444443 567899999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++++|+++|+++++++|+||+|.++.. ..++..+...+++++++||||+||++|+|+||++++ +++++
T Consensus 145 ~l~~l~~~~~~~~~~iI~DE~y~~~~~----~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~--------~~l~~ 212 (330)
T PRK05664 145 RLLAWHARLAARGGWLVVDEAFMDNTP----QHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAE--------PALLR 212 (330)
T ss_pred HHHHHHHHHHhcCCEEEEECCcccCCC----cccccccccCCCEEEEeeccccccCCCcceEEEEeC--------HHHHH
Confidence 999999999999999999999987641 123344445568999999999999999999999985 36888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCc--eEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGS--SLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g--~~~~~~l 343 (343)
.+.+... .+..+...|.++ ..+|.+. .+.+ .++.++++++.+.+.|+++ |+. +.+| +|+|+++
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~-~~~L~~~-~~~~~~~~~~~~~r~~l~~~L~~~-~~~---~~~~~~~f~~~~~ 278 (330)
T PRK05664 213 ALAELLG-PWTVSGPTRWLA-QAALADT-PWQRRQRERLLAASQRLAALLRRH-GLT---PAGGCALFQWVRT 278 (330)
T ss_pred HHHHhcC-CCCCCHHHHHHH-HHHHhCh-HHHHHHHHHHHHHHHHHHHHHHHC-CCc---ccCCcceEEEEec
Confidence 8887654 345677888887 6667653 3344 8889999999999999987 653 3444 8888863
No 101
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.7e-36 Score=274.64 Aligned_cols=258 Identities=14% Similarity=0.160 Sum_probs=203.0
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAI 113 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~al 113 (343)
..+++|+.++ +++++++..... .. +..|+++ . .+||+++++++ ++. +++|++|+|++++|
T Consensus 24 ~~~i~ls~Ne----np~~~~~~~~~~--~~-----~~~Yp~~-~-~~L~~~ia~~~------~~~~~~~I~i~~Gs~e~i 84 (339)
T PRK06959 24 DAWLDLSTGI----NPHGYPVPPVPA--DA-----WRRLPED-D-DGLAACAARYY------GAPDAAHVLPVAGSQAAI 84 (339)
T ss_pred hhhceeccCC----CCCCCCCCCCCH--HH-----HHhCCCc-h-HHHHHHHHHHh------CCCCcccEEECcCHHHHH
Confidence 5679999999 334444211111 11 3468864 3 89999999998 444 58999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..+.. ++++|+ |+++.|+|..|...++..|.+++.++.+. +.+. +..+++++|+||||||.+++.+
T Consensus 85 ~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~~----~~~~~v~l~nPnNPTG~~~s~~ 150 (339)
T PRK06959 85 RALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTLP----AALTHLIVVNPNNPTAERLPAA 150 (339)
T ss_pred HHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhcc----ccCCEEEEeCCCCCCCCCCCHH
Confidence 97765 567776 88899999999999999999998886532 2222 2456899999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
+++++++.|++++.++|+||+|.++.+. .++..+...+++|+++||||.||++|+|+||++++ +++++
T Consensus 151 ~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~--------~~li~ 218 (339)
T PRK06959 151 RLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAA--------PALLA 218 (339)
T ss_pred HHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecC--------HHHHH
Confidence 9999999999999999999999997643 22223323467999999999999999999999985 47899
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++... .++.+.++|.++ .++|.+ .++.+ .++.++++|+.+.+.|+++ |+.+. .+++|+|+++
T Consensus 219 ~l~~~~~-~~~vs~~~q~a~-~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~ 283 (339)
T PRK06959 219 ALRDALG-AWTVSGPARHAV-RAAFAD-AAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDD 283 (339)
T ss_pred HHHHhcC-CCCCcHHHHHHH-HHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeC
Confidence 9988765 456788889888 777776 44555 8899999999999999998 77763 3689999874
No 102
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.9e-36 Score=276.42 Aligned_cols=272 Identities=18% Similarity=0.286 Sum_probs=217.9
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE-ecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV-TSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~-~~g~~~a 112 (343)
+.++++|+.+++ .++++|.+++++.+.+.. ...|+++. .+++|+++++++ ++++++|++ ++|++++
T Consensus 33 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~ 99 (361)
T PRK00950 33 PESIIKLGSNEN----PLGPSPKAVEAIEKELSK--IHRYPEPD-APELREALSKYT------GVPVENIIVGGDGMDEV 99 (361)
T ss_pred ccceEEccCCCC----CCCCCHHHHHHHHHHHHh--hcCCCCCC-HHHHHHHHHHHh------CCCHHHEEEeCCCHHHH
Confidence 448899999984 477888899988887653 35788754 499999999998 568899999 7899999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
+..++++++++||.|++++|+|..+...++..|.+++.++.+ +++.+|++++++.++++++++++++|+||||.+++.
T Consensus 100 i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~ 177 (361)
T PRK00950 100 IDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKRE--EDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE 177 (361)
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence 999999999999999999999999988889999999888743 457899999999888788999999999999999998
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
+++.+++ +++|+++|+||+|.++. +.....+ ....+++++++||||+||++|+|+||++++ ++++
T Consensus 178 ~~l~~l~---~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~--------~~~~ 242 (361)
T PRK00950 178 EDIRKIL---ESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVP--------EWLI 242 (361)
T ss_pred HHHHHHH---HHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCC--------HHHH
Confidence 8776665 57799999999999875 2221121 223358999999999999999999999985 3688
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+++... .+..+.+.|.++ ..++.+ .++++ .+++++++++.+.+.|. +.+ .|++|+|+|+++
T Consensus 243 ~~~~~~~~-~~~~~~~~~~~a-~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~----~~~-~~~~~~~i~~~~ 306 (361)
T PRK00950 243 DYYMRAKT-PFSLTRLSQAAA-IAALSD-KEYIEKSIEHGIKSREYLYNELP----FKV-YPSEANFVLVDV 306 (361)
T ss_pred HHHHHhcC-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHhhcC----eeE-CCCcceEEEEEC
Confidence 88877654 345677788777 566665 34444 77788888888877765 444 577899999874
No 103
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=3.7e-35 Score=263.22 Aligned_cols=239 Identities=17% Similarity=0.213 Sum_probs=184.3
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.++|+|+.+.+ .++ ++.+.+++.+++.. .+.|+. ...+|+++++++. ++|++|+|++++|
T Consensus 7 ~~~~i~l~~~~n----p~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~al 67 (311)
T PRK08354 7 EEGLIDFSASVN----PYP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEAL 67 (311)
T ss_pred ccceeEecCCCC----CCC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHHH
Confidence 567899999972 344 47888888887653 456864 4789999999982 5899999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++..+ .+||+|++++|+|+.|...++..|.+++.+ .+|++.+++.++ +++++++++||||||.+++.+
T Consensus 68 ~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~ 137 (311)
T PRK08354 68 YLIGILA-LRDRKVIIPRHTYGEYERVARFFAARIIKG--------PNDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFK 137 (311)
T ss_pred HHHHHhh-CCCCeEEEeCCCcHHHHHHHHHcCCEEeec--------CCCHHHHHHhhc-CCCEEEEecCCCCCCCccCHH
Confidence 9888544 589999999999999999999999998764 257889988776 567899999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++++|+++|+++|+++|+||+|.+|.+++... ..+++++++||||+|+++|+|+||+++ +.+
T Consensus 138 ~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~-------~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~~~ 199 (311)
T PRK08354 138 ELKPLLDAVEDRNALLILDEAFIDFVKKPESP-------EGENIIKLRTFTKSYGLPGIRVGYVKG-----------FEE 199 (311)
T ss_pred HHHHHHHHhhhcCcEEEEeCcchhcccccccc-------CCCcEEEEeccHhhcCCccceeeeeee-----------hHH
Confidence 99999999999999999999999998764311 146899999999999999999999997 344
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHh
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQI-MIHGNFLENFAGSCVPS 321 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~-l~~~~~~~~~~~~~~~~ 321 (343)
.++.... .+..+...+.++ ..++.+..++ .+.++.++++++.+.+.
T Consensus 200 ~l~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 246 (311)
T PRK08354 200 AFRSVRM-PWSIGSTGYAFL-EFLIEDDFEHLRKTMPLIWREKERFEKA 246 (311)
T ss_pred HHHHcCC-CccCCHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 5554443 344555666666 5555432122 22445555555544433
No 104
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=2.4e-35 Score=266.64 Aligned_cols=264 Identities=18% Similarity=0.218 Sum_probs=212.4
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
.+..++|+.|.+. ++++ ..+. . .....+|+++.+ +++|+.+++++ ++++++|++|+|+++++
T Consensus 16 ~~~~~~~~~~~~~----~~~~--~~~~---~--~~~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~i 77 (330)
T TIGR01140 16 PEDWLDFSTGINP----LGPP--VPPI---P--ASAWARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEAI 77 (330)
T ss_pred hhheeEccccCCC----CCCC--hhhc---c--hHHHhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence 5568999999843 3322 2111 1 113467988765 99999999998 46789999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..+... +.+| .|++++|+|..+...++..|.+++.++ |++.+++.++ +++++++++||||||.+++.+
T Consensus 78 ~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~~ 145 (330)
T TIGR01140 78 YLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPPE 145 (330)
T ss_pred HHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCHH
Confidence 998766 4677 799999999999999999999988875 6888988884 577899999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc-cCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV-FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~-~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
++++|+++|+++|+++|+||+|..+.+.. ++.. .+..+++|+++||||.||++|+|+||++++ ++++
T Consensus 146 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~--------~~~~ 213 (330)
T TIGR01140 146 TLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAH--------PALL 213 (330)
T ss_pred HHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCC--------HHHH
Confidence 99999999999999999999999887542 1221 233468999999999999999999999985 3688
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++..... .+.++.++|.++ ..++++ ..|.+ .+++++++++.+.+.|++++++.+ .|.+|+|+|+++
T Consensus 214 ~~l~~~~~-~~~~s~~~q~~~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~f~~~~~ 281 (330)
T TIGR01140 214 ARLREALG-PWTVNGPARAAG-RAALAD-TAWQAATRARLAAERARLAALLARLGGLEV-VGGTALFLLVRT 281 (330)
T ss_pred HHHHhcCC-CCCchHHHHHHH-HHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhCCCceE-CCCCCeEEEEEc
Confidence 88877654 456678888888 677765 34544 789999999999999999855665 567899999874
No 105
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-35 Score=253.35 Aligned_cols=325 Identities=18% Similarity=0.196 Sum_probs=252.7
Q ss_pred CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCC-CCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298 5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHS-CFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 83 (343)
+.....|++ +|..+...+..+. ++++|||++|...... ..+..+.++++-+....+.....|.|..|.++++
T Consensus 3 ~~i~~~p~D--pIlgL~e~f~~D~-----R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~ 75 (396)
T COG1448 3 EKIEAAPAD--PILGLKEAFKADP-----RPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFL 75 (396)
T ss_pred cccccCCCC--chhHHHHHHhcCC-----CcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHH
Confidence 445667777 8999999999987 7899999999844322 3667788888877777777788999999999999
Q ss_pred HHHHHHHhhhCCCC---CCCCcE--EEecChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC
Q 019298 84 RAIAEYLSRDLPYK---LTPNDV--FVTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156 (343)
Q Consensus 84 ~~ia~~~~~~~~~~---~~~~~i--~~~~g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 156 (343)
+++++++ +|.. +..+++ +-|.|+|+||......+. .+..+|++++|+|+++.......|+++..+++...
T Consensus 76 ~~~~~ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~ 152 (396)
T COG1448 76 EAVQKLL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDA 152 (396)
T ss_pred HHHHHHh---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeecccc
Confidence 9999999 5533 455555 678999999999988874 46678999999999999999999999999998877
Q ss_pred CCCCCCHHHHHhhhcC--CceEEEEe-CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC-CCCCcccccC
Q 019298 157 KGWEVDLDDIESLADQ--NTVALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFG 232 (343)
Q Consensus 157 ~~~~~d~~~l~~~~~~--~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~-~~~~~~~~~~ 232 (343)
.+..+|++.+...++. ...++++. .+|||||..++.++|++|+++.++++.+.+.|-||++|..+- ++...++.+.
T Consensus 153 ~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a 232 (396)
T COG1448 153 ETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFA 232 (396)
T ss_pred ccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHH
Confidence 7778999998887764 23344444 449999999999999999999999999999999999987653 2222333332
Q ss_pred C-CCCEEEEccCccccCCCCCcEEEEE--EeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhh---HHHH
Q 019298 233 S-TVPILTLGSLSKRWIVPGWRLGWFV--TTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTI---MQIM 305 (343)
Q Consensus 233 ~-~~~~i~~~S~sK~~~~~G~r~G~i~--~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~---~~~l 305 (343)
. ...++++.|+||+||++|.|+|.+. +.+.+.. ..+..+++.. +..+++||......+ ..+|+++ +.|.
T Consensus 233 ~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a---~~v~sqlk~~iR~~ySnPP~~Ga~vv-a~IL~~p~Lra~W~ 308 (396)
T COG1448 233 EVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEA---DRVLSQLKAIIRTNYSNPPAHGAAVV-ATILNNPELRAEWE 308 (396)
T ss_pred HhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHH---HHHHHHHHHHHHhccCCCchhhHHHH-HHHhCCHHHHHHHH
Confidence 2 2248999999999999999999943 3332100 1233344444 445778888888877 8888875 4555
Q ss_pred H----HHHHHHHHHHHHHHhhcCC-C--CceeeCCCCceEeeecC
Q 019298 306 I----HGNFLENFAGSCVPSYKLI-P--ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 306 ~----~~~~~~~~~~~~~~~L~~~-~--g~~~~~~~~g~~~~~~l 343 (343)
. +++++.++|..+.+.|+.. + .|.++..+.|||-+..|
T Consensus 309 ~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl 353 (396)
T COG1448 309 QELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGL 353 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCC
Confidence 4 9999999999999999873 2 37777889999988754
No 106
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-33 Score=233.78 Aligned_cols=313 Identities=24% Similarity=0.322 Sum_probs=230.5
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHH----HHHHhcC----CCCC
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAV----AEALLSE----KFNG 72 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~ 72 (343)
|.+|..+.++..- .++.++++++-+..+ .++.|.|+.|.|. ..|++.+.. .+.+..+ ...+
T Consensus 1 m~fs~fGdkft~~-sGi~~lMdDl~d~Lr----t~g~imLggGNPa------~iPem~~~f~~~~aemla~~~~~e~~cn 69 (417)
T COG3977 1 MQFSLFGDKFTRH-SGITQLMDDLNDGLR----TPGAIMLGGGNPA------RIPEMDDYFQDLLAEMLASGKATEALCN 69 (417)
T ss_pred CchhhhhHHhhhh-hhHHHHHHHHHhhcc----CCCceeeCCCCcc------cChhHHHHHHHHHHHHHhcchHHHHHhc
Confidence 6788888887754 489999999999986 5569999999864 234454444 3444333 4679
Q ss_pred CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC---CC--CeEEEe-CCCCcchHHHHHhcCc
Q 019298 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR---PG--ANILLP-RPGFPIYELSAAFRHI 146 (343)
Q Consensus 73 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~---~g--d~vl~~-~p~~~~~~~~~~~~g~ 146 (343)
|..++|...|.++++.++++++|+.+.+++|.+|+|++.+.+-++..+.. .| ..|++| .|.|-+|.+....-..
T Consensus 70 Y~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~ 149 (417)
T COG3977 70 YDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDL 149 (417)
T ss_pred CCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccc
Confidence 99999999999999999999999999999999999999999999887753 23 355555 8999988765443222
Q ss_pred eeEE---eecCCCC--CCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC
Q 019298 147 EVRH---FDLLPDK--GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221 (343)
Q Consensus 147 ~~~~---~~~~~~~--~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~ 221 (343)
-+.. +++.+.. .+.+|.+++.- .+.+.+|+++.|.||||.+++.+++.+|..++++||+.+|+|.+|+.
T Consensus 150 fVs~kP~iel~~~g~FKY~vDF~~l~i--~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~---- 223 (417)
T COG3977 150 FVSAKPNIELLPAGQFKYHVDFEHLHI--GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV---- 223 (417)
T ss_pred eeeccCCcccccccceeeccCHHHccc--ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC----
Confidence 1111 1122222 25577777653 46788999999999999999999999999999999999999999986
Q ss_pred CCCCCccc--cc--CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhc
Q 019298 222 DKPFVPMG--VF--GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYG 296 (343)
Q Consensus 222 ~~~~~~~~--~~--~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~ 296 (343)
+++.+. .. .=.+|+|.|.|+||. |+||.|+|.+++ |+++++.+..+..+ +..+..+.++.+ ..
T Consensus 224 --PFP~iifsd~~~~w~~NiilC~SLSK~-GLPG~R~GIiIa--------ne~viqaitnmn~iisLap~~~G~Aia-~~ 291 (417)
T COG3977 224 --PFPGIIFSDATPLWNENIILCMSLSKL-GLPGSRCGIIIA--------NEKVIQAITNMNGIISLAPGRMGPAIA-AE 291 (417)
T ss_pred --CCCceecccccccCCCCEEEEeehhhc-CCCCcceeEEEc--------cHHHHHHHHhccceeeecCCCccHHHH-HH
Confidence 222111 11 113589999999999 999999999998 46899999888654 556666766666 22
Q ss_pred cchhhHHHHH-----HHHHHHHHHHHHHHhhcC-CCC--ceeeCCCCceEeeecC
Q 019298 297 CLSTIMQIMI-----HGNFLENFAGSCVPSYKL-IPE--LINFKSTGSSLKYLDL 343 (343)
Q Consensus 297 ~l~~~~~~l~-----~~~~~~~~~~~~~~~L~~-~~g--~~~~~~~~g~~~~~~l 343 (343)
++.. ..+++ .+..|+++.+...+.|++ +|. +.+++|+|+.|+|+.|
T Consensus 292 mie~-gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf 345 (417)
T COG3977 292 MIES-GDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWF 345 (417)
T ss_pred Hhhc-chHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhh
Confidence 2221 12222 555666666666666654 443 4588999999999975
No 107
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-32 Score=237.89 Aligned_cols=261 Identities=18% Similarity=0.271 Sum_probs=210.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHh-hhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCcee
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLS-RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV 148 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~ 148 (343)
..+|++..|.++|+..+.++.+ .........-.|++|+|.+.+++.+++.++++||.|++...+|..-....+..|+.+
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ 172 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKI 172 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceE
Confidence 3489999999999999999664 222323344489999999999999999999999999999999999888889999999
Q ss_pred EEeecCCCCCCCCCHHHHHhhhcC---C-----ceEEEEeCC--CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcc
Q 019298 149 RHFDLLPDKGWEVDLDDIESLADQ---N-----TVALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL 218 (343)
Q Consensus 149 ~~~~~~~~~~~~~d~~~l~~~~~~---~-----~~~i~~~~p--~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~ 218 (343)
+.++++ ..++++|.|++.+.. . .+-|+.+.| +||||..++.+..++|.++|++||++||+||.|..+
T Consensus 173 ipv~md---~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L 249 (472)
T KOG0634|consen 173 IPVKMD---QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL 249 (472)
T ss_pred Eecccc---CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence 988884 346899999987753 1 134555656 899999999999999999999999999999999999
Q ss_pred ccCC--------CC-----------CCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298 219 VFGD--------KP-----------FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF 279 (343)
Q Consensus 219 ~~~~--------~~-----------~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~ 279 (343)
.++. .+ .+++.+++.++|||...||||. ..||+|+||+.+++ .++++.-...
T Consensus 250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~~--------~~l~ril~~a 320 (472)
T KOG0634|consen 250 QMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGNS--------LFLKRILDLA 320 (472)
T ss_pred eccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecCH--------HHHHHHhhhc
Confidence 8872 11 2234455677899999999999 58999999999853 5777666554
Q ss_pred cc-ccCcchHHHHHHHhccchhh--H---HHHH-HHHHHHHHHHHHHHhhcC-CCCc--eeeCCCCceEeeecC
Q 019298 280 DI-LGDPATFIQVCIMYGCLSTI--M---QIMI-HGNFLENFAGSCVPSYKL-IPEL--INFKSTGSSLKYLDL 343 (343)
Q Consensus 280 ~~-~~~~~~~~~~a~~~~~l~~~--~---~~l~-~~~~~~~~~~~~~~~L~~-~~g~--~~~~~~~g~~~~~~l 343 (343)
.. +.+++.+.|..+ ++.|++- . +|+. .+..|.++|+.+..+|.+ +|+. .++.|.+|+|+|+++
T Consensus 321 e~~t~~pSg~sq~iv-~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i 393 (472)
T KOG0634|consen 321 EVATSGPSGFSQGIV-YAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEI 393 (472)
T ss_pred ceeecCcccccHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEe
Confidence 43 567899999998 7777652 2 2333 888899999999999987 6654 588999999999974
No 108
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=5.7e-31 Score=240.08 Aligned_cols=294 Identities=31% Similarity=0.507 Sum_probs=233.3
Q ss_pred eEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHH
Q 019298 38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM 117 (343)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~ 117 (343)
+||+.|.+. +..++.+.+++...........|++..|..++++.+++++...++.....+++++++|+++++..++
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~ 76 (350)
T cd00609 1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL 76 (350)
T ss_pred CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 578888843 5666777666654222334567888899999999999999987766666889999999999999999
Q ss_pred HHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHH
Q 019298 118 ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK 197 (343)
Q Consensus 118 ~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~ 197 (343)
.++.++||+|+++.++|.++...++..|.+++.++.........+.+.++....++++++++++|+||||.+++.+++++
T Consensus 77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~ 156 (350)
T cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEE 156 (350)
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999998865444333336666666778899999999999999999999999
Q ss_pred HHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh
Q 019298 198 LAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277 (343)
Q Consensus 198 l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~ 277 (343)
|+++|+++|+++|+|++|+.+.+.+............+.+++++|++|.++.+|.|+||+++++ +++.+.++.
T Consensus 157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~-------~~~~~~~~~ 229 (350)
T cd00609 157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP-------EELLERLKK 229 (350)
T ss_pred HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH-------HHHHHHHHH
Confidence 9999999999999999999887765443222233444578999999999988999999999853 257777776
Q ss_pred hhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 278 YFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 278 ~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.... .+.++...+.++ ..++....++++ .+++++++++.+.+.|.+++...+..+.+|+|+|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~ 296 (350)
T cd00609 230 LLPYTTSGPSTLSQAAA-AAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDL 296 (350)
T ss_pred HHHhcccCCChHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEec
Confidence 6443 457777878777 666665423443 7888999999999999987544435778899999864
No 109
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-32 Score=234.38 Aligned_cols=269 Identities=24% Similarity=0.380 Sum_probs=228.5
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEeCCCCcchHHHHHhcCc
Q 019298 68 EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHI 146 (343)
Q Consensus 68 ~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~g~ 146 (343)
+.+..|..++|.+-+|+.+|+|+.++-|.+.+|++|++|+|++.++..++..++ .+.+.|++|-|.|+-|...+...|.
T Consensus 104 Gs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~ 183 (475)
T KOG0258|consen 104 GSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGG 183 (475)
T ss_pred CcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCC
Confidence 367899999999999999999999999988999999999999999999998875 5779999999999999999999999
Q ss_pred eeEEeecCCCCCCCCCHHHHHhhhcC-----CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC
Q 019298 147 EVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221 (343)
Q Consensus 147 ~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~ 221 (343)
..+.+.++++.+|.+|.++|++.+.+ +++++++.||.||||++++.+.+++|+++|.+++++++-||+|+..+|.
T Consensus 184 ~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~ 263 (475)
T KOG0258|consen 184 TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYT 263 (475)
T ss_pred cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccC
Confidence 99999999999999999999987754 6789999999999999999999999999999999999999999999887
Q ss_pred C-CCCCccccc--------CCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHH
Q 019298 222 D-KPFVPMGVF--------GSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQV 291 (343)
Q Consensus 222 ~-~~~~~~~~~--------~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 291 (343)
+ +.++++... .+..-++.++|.||.+.. +|.|-||+-.-+ .+|+..+.+.++.....+++...|.
T Consensus 264 ~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n-----~~prv~~qi~Kl~si~lc~~V~GQ~ 338 (475)
T KOG0258|consen 264 TGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLN-----RDPRVKQQIKKLASIKLCPQVSGQK 338 (475)
T ss_pred CCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeeccc-----CChhHHHHHHHHHhhhhcCCccchh
Confidence 5 355554321 112246899999999877 999999987755 2467788887777666677777777
Q ss_pred HHHhccchhh-------HHHHH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 292 CIMYGCLSTI-------MQIMI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 292 a~~~~~l~~~-------~~~l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
.+ ...+.-+ ..+.+ ....++++...+.+.++.++|+.+..++|+||+|-+
T Consensus 339 ~v-dl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~ 399 (475)
T KOG0258|consen 339 LV-DLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQ 399 (475)
T ss_pred hh-ceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeeccc
Confidence 77 3333321 22222 778888999999999999999999999999999864
No 110
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=2.8e-31 Score=247.81 Aligned_cols=281 Identities=12% Similarity=0.065 Sum_probs=207.5
Q ss_pred ccceeEeccCCCCCCCCCCCcH---HHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTH---VATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+.++++|++|+|. ..+.+++ .+.+++.+++..+. ..|++..|.++||++++++++ .+++++|+|++
T Consensus 35 g~~~~~L~~g~p~--~D~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~~~~--------~~~vv~t~ggt 103 (460)
T PRK13238 35 GYNPFLLKSEDVF--IDLLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKDIFG--------YPYTIPTHQGR 103 (460)
T ss_pred CCCEEeCCCCCCC--CCCCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHHHhC--------CCcEEECCCHH
Confidence 7899999999984 1244433 67888777776543 479999999999999999993 46899999999
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC------CCCC--CCHHHHHhhhcC----CceEEE
Q 019298 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD------KGWE--VDLDDIESLADQ----NTVALV 178 (343)
Q Consensus 111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~------~~~~--~d~~~l~~~~~~----~~~~i~ 178 (343)
+++..++.+++++|| |+++.|.|..|...+...|.+++.+++++. +.|. +|+++|++.+++ ++++|+
T Consensus 104 ~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Iv 182 (460)
T PRK13238 104 AAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIV 182 (460)
T ss_pred HHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEE
Confidence 999999999999999 999999999999989999999999988642 3444 999999999874 688999
Q ss_pred EeCCCCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCc--cccCC-----CCCCcccccCCCCCEEEEccCccccCCC
Q 019298 179 IINPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGH--LVFGD-----KPFVPMGVFGSTVPILTLGSLSKRWIVP 250 (343)
Q Consensus 179 ~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~--~~~~~-----~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 250 (343)
+++|+|||| .+++.+++++|.++|++||+++|+|+++.. .+|.. ....++..+ +..++|++|.+.++
T Consensus 183 l~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i-----~~~~~s~~D~~~~S 257 (460)
T PRK13238 183 MTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI-----AREMFSYADGLTMS 257 (460)
T ss_pred EecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----hhhhcccCcEEEEe
Confidence 999999997 999999999999999999999999997632 33321 111121111 12334555555555
Q ss_pred CCcE------EEEEEeCCCCCCCchHHHHHHhhhh----c-cccC-cchHHHHHHHhccchh--hHHHHHHHHHHHHHHH
Q 019298 251 GWRL------GWFVTTDPCGMFRKPKVVERMKKYF----D-ILGD-PATFIQVCIMYGCLST--IMQIMIHGNFLENFAG 316 (343)
Q Consensus 251 G~r~------G~i~~~~~~~~~~~~~~~~~l~~~~----~-~~~~-~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~ 316 (343)
|+|+ |++++++ +++.++++... . ..++ .+...|.|+ ...|.+ ...++ +...++++
T Consensus 258 g~K~g~~~~GG~i~~~d-------~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Al-a~~l~e~~~~~~~---~~~~~~~~ 326 (460)
T PRK13238 258 AKKDAMVNIGGLLCFRD-------EDLFTECRTLCILYEGFPTYGGLAGRDMEAL-AVGLYEGMDEDYL---AYRIGQVE 326 (460)
T ss_pred cccCCCCcceeEEEcCh-------HHHHHHhhhcccccCCcccccCcHHHHHHHH-HhhHHHhhChHHH---HHHHHHHH
Confidence 5554 3455432 46888887663 1 1233 344446666 333332 12222 22334678
Q ss_pred HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 317 SCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.+.|++. |+++..|+||+|+|+++
T Consensus 327 ~l~~~L~~~-G~~~~~p~Gg~~v~~d~ 352 (460)
T PRK13238 327 YLGEGLEEA-GVPIQTPAGGHAVFVDA 352 (460)
T ss_pred HHHHHHHHC-CCCeEccCCceEEEEEc
Confidence 899999887 99988999999999874
No 111
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.97 E-value=2e-29 Score=232.30 Aligned_cols=286 Identities=13% Similarity=0.082 Sum_probs=207.4
Q ss_pred ccccceeEeccCCC--CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 32 KNEKKVISLAMGDP--TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 32 ~~~~~~i~l~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
..+-++++|..+++ +..+..++ ..+.+++..++..+.. .|.+..|.++|+++++++++ .+++++|+|+
T Consensus 8 ~~g~n~~~l~~~~v~iDlltds~t-~ams~~~~~a~~~gd~-~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~G 77 (431)
T cd00617 8 EAGYNVFLLRSEDVYIDLLTDSGT-GAMSDYQWAAMMLGDE-AYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQG 77 (431)
T ss_pred HcCCCEEeCCCCCcCCCCCCCCCc-HHHHHHHHHHHHhCCC-ccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCH
Confidence 34889999999998 53333322 3555555555554443 59999999999999999993 4689999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC--------CCCCHHHHHhhhcCC----ceEE
Q 019298 110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG--------WEVDLDDIESLADQN----TVAL 177 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~d~~~l~~~~~~~----~~~i 177 (343)
++++..++.++++|||.| ++.|+|..+...+...|...+.+++++..+ +.+|+++|++.++++ +++|
T Consensus 78 t~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I 156 (431)
T cd00617 78 RGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYI 156 (431)
T ss_pred HHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEE
Confidence 999999999999999988 689999999999999999999999875432 449999999999764 6789
Q ss_pred EEeCCCCCc-ccccCHHHHHHHHHHHhhcCcEEEEccCCCc--ccc-----CCCCCCcccccCCCCCEEEEccCccccCC
Q 019298 178 VIINPGNPC-GNVYSYQHLQKLAETANKLKTLVIADEVYGH--LVF-----GDKPFVPMGVFGSTVPILTLGSLSKRWIV 249 (343)
Q Consensus 178 ~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~--~~~-----~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 249 (343)
++++|+||+ |++++.++++++.++|++||+++|+|++... ..+ ++....++.. .++.++|++|.+.+
T Consensus 157 ~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e-----i~~e~~s~sd~~~m 231 (431)
T cd00617 157 VLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE-----IAREMFSYADGCTM 231 (431)
T ss_pred EEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH-----HHHHhhccCCEEEE
Confidence 999999998 9999999999999999999999999999542 122 1111122211 23456677777777
Q ss_pred CCCc------EEEEEEeCCCCCCCchHHHHHHhhhh----c-c-ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHH
Q 019298 250 PGWR------LGWFVTTDPCGMFRKPKVVERMKKYF----D-I-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGS 317 (343)
Q Consensus 250 ~G~r------~G~i~~~~~~~~~~~~~~~~~l~~~~----~-~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~ 317 (343)
+|+| .||+++++ ++++++++... . . ++..+.....++ ...|.+..+ .+..+...++++.
T Consensus 232 S~~K~~~~~~GG~i~~~d-------~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~-A~gL~e~~~-~~~l~~~~~~r~~ 302 (431)
T cd00617 232 SAKKDGLVNIGGFLALRD-------DELYEEARQRVVLYEGFVTYGGMAGRDMEAL-AQGLREAVE-EDYLRHRVEQVRY 302 (431)
T ss_pred EeecCCCCccceEEEeCc-------HHHHHHHHHhccccCCccccccccHHHHHHH-HHHHHhccc-HHHHHHHHHHHHH
Confidence 7776 56888754 35888877432 1 1 112222222333 334433211 2322333335588
Q ss_pred HHHhhcCCCCceeeCCCCceEeeecC
Q 019298 318 CVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 318 ~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+.|++. |+++..|+||+|+|++.
T Consensus 303 l~~~L~~~-G~~v~~P~Ggh~v~~d~ 327 (431)
T cd00617 303 LGDRLDEA-GVPIVEPAGGHAVFIDA 327 (431)
T ss_pred HHHHHHHC-CCCccCCCcceEEEEEh
Confidence 88999998 89988999999999973
No 112
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1e-28 Score=202.57 Aligned_cols=240 Identities=20% Similarity=0.283 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG 158 (343)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 158 (343)
..++.++++- .+..+|+|++..|+.+.|..+++..+.|| ++|+...|+|..|...+...+.+++.+++.+ +
T Consensus 72 k~ls~a~~~d------kpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--d 143 (375)
T KOG0633|consen 72 KRLSDALAQD------KPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--D 143 (375)
T ss_pred chhhhhcccC------CCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--C
Confidence 4455554433 37899999999999999999999999999 8999999999999999999999999999886 6
Q ss_pred CCCCHHHHHhhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC
Q 019298 159 WEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236 (343)
Q Consensus 159 ~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~ 236 (343)
|.+|.|++.+.+.. .++.+++++|+||||..+..+++.++.+.-. |.++++||+|.+|.-.++ .+.-....+|
T Consensus 144 F~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~S---~~~lV~kYpN 218 (375)
T KOG0633|consen 144 FSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVES---RMKLVKKYPN 218 (375)
T ss_pred ccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeeccccc---cchHhHhCCc
Confidence 88999999998764 6789999999999999999999999998665 799999999999864333 2333456678
Q ss_pred EEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccch--hhHHHHHHHHHHHHH
Q 019298 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLS--TIMQIMIHGNFLENF 314 (343)
Q Consensus 237 ~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~--~~~~~l~~~~~~~~~ 314 (343)
++++.+|||+||++|+|+||...+- ++++.+-.... .++.+.....++ .++|+ +...+...+..+.+.
T Consensus 219 LivlqTlSKsfGLAGiRvG~~~~~~--------~ia~iln~~Ka-PYNiS~~~s~~A-L~Als~~n~kkme~~rdaiv~e 288 (375)
T KOG0633|consen 219 LIVLQTLSKSFGLAGIRVGYGAFPL--------SIAEILNRAKA-PYNISVAGSVAA-LAALSDSNGKKMEDVRDAIVRE 288 (375)
T ss_pred eeehhhhhhhcCcceeEeecccccH--------HHHHHHHhccC-CccccchhHHHH-HHhcCcccchHHHHHHHHHHHH
Confidence 9999999999999999999988753 56666665554 344555555555 46666 334444489999999
Q ss_pred HHHHHHhhcCCCCce-eeCCCCceEeeec
Q 019298 315 AGSCVPSYKLIPELI-NFKSTGSSLKYLD 342 (343)
Q Consensus 315 ~~~~~~~L~~~~g~~-~~~~~~g~~~~~~ 342 (343)
|.++.+.|..+|++. +..+..++|+.++
T Consensus 289 r~RL~keLt~v~~~~~~~gg~daNFiLi~ 317 (375)
T KOG0633|consen 289 RERLFKELTEVPFLNDYPGGSDANFILIE 317 (375)
T ss_pred HHHHHHHhhcCccccCCCCcccccEEEEE
Confidence 999999999998877 6688889998875
No 113
>PLN02822 serine palmitoyltransferase
Probab=99.96 E-value=1e-27 Score=225.72 Aligned_cols=285 Identities=14% Similarity=0.102 Sum_probs=207.0
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-CC-----CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EK-----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~ 106 (343)
++++++||+.+++ .++..+|.+++++.+++++ +. -..|++..+..+|++++++++. .++.|+++
T Consensus 107 ~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s 176 (481)
T PLN02822 107 NGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS 176 (481)
T ss_pred CCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 3678999999873 3466799999999999976 21 1146666678999999999994 35788888
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCc-eEEEEeCCC
Q 019298 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNT-VALVIINPG 183 (343)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~-~~i~~~~p~ 183 (343)
+|.+ ++..++.+++++||.|++....|..+...+...+.+++.++.++.+++..+++++++... +++ ++|++..++
T Consensus 177 ~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~ 255 (481)
T PLN02822 177 YGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIY 255 (481)
T ss_pred CHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence 8877 578889999999999999988888887788888888888875432222222333322211 223 577777889
Q ss_pred CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
|++|.+.+ +++|+++|++||+++|+||+|+..+++.. ..............|+++||||+|++.| ||++++
T Consensus 256 ~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~- 328 (481)
T PLN02822 256 QNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGS- 328 (481)
T ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcC-
Confidence 99999977 78889999999999999999997777632 2111111112245699999999999888 999985
Q ss_pred CCCCCCchHHHHHHhhhh-cccc--CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceE
Q 019298 262 PCGMFRKPKVVERMKKYF-DILG--DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSL 338 (343)
Q Consensus 262 ~~~~~~~~~~~~~l~~~~-~~~~--~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~ 338 (343)
+++++.++... ...+ +.++..+.++ .++|+....+-+.+++++++++.+.+.|++++|+.+..+.++++
T Consensus 329 -------~~ii~~~~~~~~~~~fsa~lPp~~~~Aa-~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi 400 (481)
T PLN02822 329 -------ARVVDHQRLSSSGYVFSASLPPYLASAA-ITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPI 400 (481)
T ss_pred -------HHHHHHHHhcCCceeeccccCHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCE
Confidence 36788776543 2222 3456666666 45555433334488899999999999999877888767788999
Q ss_pred eeecC
Q 019298 339 KYLDL 343 (343)
Q Consensus 339 ~~~~l 343 (343)
+|+.+
T Consensus 401 ~~l~l 405 (481)
T PLN02822 401 VFLHL 405 (481)
T ss_pred EEEEe
Confidence 88753
No 114
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=1.5e-26 Score=211.95 Aligned_cols=275 Identities=12% Similarity=0.110 Sum_probs=194.7
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAG----LPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~ 106 (343)
++.+++||+.|+| .+++.++.+.+++++++.... ...|....| ..+++++++++++ .+++++++
T Consensus 14 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~ 83 (360)
T TIGR00858 14 DGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLFS 83 (360)
T ss_pred CCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 4788999999953 234567899999999886411 112222223 3457788877773 35677888
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCC
Q 019298 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINP 182 (343)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p 182 (343)
+|+.+ +..+++.++++||+|+++.|+|..+...++..|.+++.++. +|++.+++.++. ++++++++++
T Consensus 84 ~G~~~-~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~ 155 (360)
T TIGR00858 84 SGYLA-NVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGV 155 (360)
T ss_pred chHHH-HHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCC
Confidence 77555 44567788899999999999999999999999988877652 578889888764 3577778888
Q ss_pred CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC--CcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF--VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~--~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~ 260 (343)
+||||.. .++++|.++|+++|+++|+||+|..+.++.... .....+...+++|+++|+||+|+++| ||++++
T Consensus 156 ~~~~G~~---~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~ 229 (360)
T TIGR00858 156 FSMDGDI---APLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS 229 (360)
T ss_pred ccCCCCC---cCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC
Confidence 9999988 457888889999999999999998765543211 12222333467899999999998877 999874
Q ss_pred CCCCCCCchHHHHHHhhhhcc---ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298 261 DPCGMFRKPKVVERMKKYFDI---LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS 337 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~ 337 (343)
+++++.++..... ....++..+.++ .++++.....-+.+++++++++.+.+.|+++ ++.+ .+.+++
T Consensus 230 --------~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~ 298 (360)
T TIGR00858 230 --------QALIDYLINRARTLIFSTALPPAVAAAA-LAALELIQEEPWRREKLLALIARLRAGLEAL-GFTL-MPSCTP 298 (360)
T ss_pred --------HHHHHHHHHhCccceecCCCCHHHHHHH-HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CCcc-CCCCCC
Confidence 3577777544221 223444444444 4444432222237889999999999999987 6776 356778
Q ss_pred Eeeec
Q 019298 338 LKYLD 342 (343)
Q Consensus 338 ~~~~~ 342 (343)
++|+.
T Consensus 299 ~~~~~ 303 (360)
T TIGR00858 299 IVPVI 303 (360)
T ss_pred EEEEE
Confidence 88875
No 115
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.95 E-value=1.1e-27 Score=203.66 Aligned_cols=327 Identities=16% Similarity=0.131 Sum_probs=247.2
Q ss_pred ccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHH
Q 019298 6 GGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRR 84 (343)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~ 84 (343)
.....||+ +|..+...+..+. .+.+|||++|..+..++-| ..+.+++|-++........+|.|..|.+++.+
T Consensus 30 ~V~maPpD--pILGVTeAfk~D~-----n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k 102 (427)
T KOG1411|consen 30 HVEMAPPD--PILGVTEAFKKDP-----NPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNK 102 (427)
T ss_pred cCCCCCCC--CcccHHHHHhcCC-----CcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHH
Confidence 34567777 8999999999887 7899999999977655544 77888888777666556679999999999999
Q ss_pred HHHHHHhhhCCCCCCCCcEE--EecChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 85 AIAEYLSRDLPYKLTPNDVF--VTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 85 ~ia~~~~~~~~~~~~~~~i~--~~~g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
..+++.-..-...+..++|+ -+-+++.++......|. -++..|.+++|+|.+.....+..|+.+..+........+
T Consensus 103 ~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~g 182 (427)
T KOG1411|consen 103 LSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRG 182 (427)
T ss_pred HHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccc
Confidence 99999943222224555664 45678889988877764 368899999999999999999999999988877767778
Q ss_pred CCHHHHHhhhcCCc-eEEE-EeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCcccccC-CC
Q 019298 161 VDLDDIESLADQNT-VALV-IINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFG-ST 234 (343)
Q Consensus 161 ~d~~~l~~~~~~~~-~~i~-~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~~-~~ 234 (343)
+|++.+.+-+.+.+ ..++ +..+ |||||+..+.|+|++|.++.++.+.+.+.|.+|++|..++- +..+++.+. +.
T Consensus 183 ld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g 262 (427)
T KOG1411|consen 183 LDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDG 262 (427)
T ss_pred cchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcC
Confidence 99888777665522 2333 3333 99999999999999999999999999999999999987753 333344443 34
Q ss_pred CCEEEEccCccccCCCCCcEEE--EEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhh---HHHHH--
Q 019298 235 VPILTLGSLSKRWIVPGWRLGW--FVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTI---MQIMI-- 306 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~--i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~---~~~l~-- 306 (343)
.+++++.|+.|.+|+.|.|+|. ++|.+.+.. ..+..+++.+ +..++++|......+ ..+|+++ .+|+.
T Consensus 263 ~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A---~rV~SQlk~liRpmYSnPP~hGArIv-~~Il~d~~l~~~W~~ev 338 (427)
T KOG1411|consen 263 HEILLAQSYAKNMGLYGERVGALSVVCKDADEA---KRVESQLKILIRPMYSNPPLHGARIV-ATILSDPDLKNQWLGEV 338 (427)
T ss_pred CceEeehhhhhhcchhhhccceeEEEecCHHHH---HHHHHHHHHHhcccccCCCccchhhh-hhccCChHHHHHHHHHH
Confidence 4799999999999999999998 566543210 1233455544 344667777777666 7888875 45554
Q ss_pred --HHHHHHHHHHHHHHhhcCC--C-CceeeCCCCceEeeecC
Q 019298 307 --HGNFLENFAGSCVPSYKLI--P-ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 307 --~~~~~~~~~~~~~~~L~~~--~-g~~~~~~~~g~~~~~~l 343 (343)
+..++...|..+.+.|... + .|.....+-|+|.|-.|
T Consensus 339 k~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl 380 (427)
T KOG1411|consen 339 KGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGL 380 (427)
T ss_pred HHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCC
Confidence 7888888888888888763 2 35555788899988653
No 116
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.95 E-value=3.1e-26 Score=212.46 Aligned_cols=270 Identities=14% Similarity=0.095 Sum_probs=193.5
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---CC----HHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---GL----PLTRRAIAEYLSRDLPYKLTPNDVFV 105 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g~----~~lr~~ia~~~~~~~~~~~~~~~i~~ 105 (343)
++.++|||+.+++ .+++.+|++++++.+++.... .+|+++. |. .++++++|++++ .+++++
T Consensus 36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii 103 (393)
T TIGR01822 36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL 103 (393)
T ss_pred CCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence 3678999999983 457889999999999887522 2566655 75 789999999983 357888
Q ss_pred ecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEE
Q 019298 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVI 179 (343)
Q Consensus 106 ~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~ 179 (343)
++|+++++..++.+++++||.|+++.|+|+.+...++..+.+...+. ..|++++++.+++ ++++|++
T Consensus 104 ~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~ 176 (393)
T TIGR01822 104 YASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIAT 176 (393)
T ss_pred ECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEE
Confidence 88999999999999999999999999999999888877776654432 2688999888764 5677788
Q ss_pred eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEE
Q 019298 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFV 258 (343)
Q Consensus 180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~ 258 (343)
.+++||||.+. ++++|+++|++||+++|+|++|.....+..........+. .+.+++++|+||.+ +|+|+||++
T Consensus 177 ~~v~~~tG~~~---~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~ 251 (393)
T TIGR01822 177 DGVFSMDGVIA---PLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASGGFTT 251 (393)
T ss_pred eCCccCCCCcC---CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEE
Confidence 88899999995 4788899999999999999999643332211111111111 13569999999995 468999998
Q ss_pred EeCCCCCCCchHHHHHHhhhh-cc-cc-CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCC
Q 019298 259 TTDPCGMFRKPKVVERMKKYF-DI-LG-DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTG 335 (343)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~~~-~~-~~-~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~ 335 (343)
++ +++++.++... .. .. ..++..+.++ ..++......-+.+++++++++.+.+.|+++ |+.+..+.+
T Consensus 252 ~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 321 (393)
T TIGR01822 252 AR--------KEVVELLRQRSRPYLFSNSLPPAVVGAS-IKVLEMLEASNELRDRLWANTRYFRERMEAA-GFDIKPADH 321 (393)
T ss_pred eC--------HHHHHHHHHhCccceecCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCC
Confidence 85 36777776542 21 22 2334433443 3444322222237788999999999999876 777644444
Q ss_pred c
Q 019298 336 S 336 (343)
Q Consensus 336 g 336 (343)
.
T Consensus 322 ~ 322 (393)
T TIGR01822 322 P 322 (393)
T ss_pred C
Confidence 4
No 117
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.95 E-value=3.7e-26 Score=212.24 Aligned_cols=278 Identities=14% Similarity=0.078 Sum_probs=196.0
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+++++|||+.|++ ++++.++.+.+++++++..... ..|....|.+++++++++++.+.+|. +++|++|+| +
T Consensus 40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~ 112 (397)
T PRK06939 40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-F 112 (397)
T ss_pred CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-H
Confidence 4778999999873 3477889999999998865321 12233468888999999988887663 367888887 7
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCC
Q 019298 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGN 184 (343)
Q Consensus 111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~n 184 (343)
+++..++++++++||.|++++|+|+.+...+...|.+++.++. .|++.+++.+++ ++++++..+.+|
T Consensus 113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~ 185 (397)
T PRK06939 113 DANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFS 185 (397)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcC
Confidence 7888899999999999999999999998888888888776643 478888877753 455666556789
Q ss_pred CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (343)
Q Consensus 185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~ 263 (343)
++|.. +++++|.++|++||+++|+||+|....++..........+. .+.+++++|+||+++ |.|+||++++
T Consensus 186 ~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~--- 257 (397)
T PRK06939 186 MDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGR--- 257 (397)
T ss_pred CCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeC---
Confidence 99987 67889999999999999999999642222111111111111 134699999999973 5689999985
Q ss_pred CCCCchHHHHHHhhhhc-c--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEe
Q 019298 264 GMFRKPKVVERMKKYFD-I--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLK 339 (343)
Q Consensus 264 ~~~~~~~~~~~l~~~~~-~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~ 339 (343)
+++++.++.... . ....++..+.++ .++++.....-+.+++++++++.+.+.|+.+ |+.+..+.++++.
T Consensus 258 -----~~~~~~l~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~ 329 (397)
T PRK06939 258 -----KEVIDWLRQRSRPYLFSNSLAPAIVAAS-IKVLELLEESDELRDRLWENARYFREGMTAA-GFTLGPGEHPIIP 329 (397)
T ss_pred -----HHHHHHHHHhCccccccCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEE
Confidence 367787765432 1 122233333433 3333322222247888999999999999887 6776556666653
No 118
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.95 E-value=5.9e-26 Score=205.40 Aligned_cols=255 Identities=16% Similarity=0.122 Sum_probs=184.3
Q ss_pred CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeE
Q 019298 48 HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANI 127 (343)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~v 127 (343)
|.++..+|.++++..++++.- . +...-+.+|++.+|+|+ +++++++++++|+++++..++.+++++||+|
T Consensus 29 ylgl~~~~~~~~~~~~~~~~~--~--g~~~~~~~Le~~lA~~~------g~~~e~ilv~~gg~~a~~~~~~al~~~gd~V 98 (346)
T TIGR03576 29 LTGLAGGFKIDEEDLELLETY--V--GPAIFEEKVQELGREHL------GGPEEKILVFNRTSSAILATILALEPPGRKV 98 (346)
T ss_pred cccCCCChhHHHHHHHHHHHh--c--CCHHHHHHHHHHHHHHc------CCCcceEEEECCHHHHHHHHHHHhCCCCCEE
Confidence 455778899999988887641 1 12233456666666666 4578999999999999999999999999999
Q ss_pred EEe---CCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 128 LLP---RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 128 l~~---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
+++ .|+|..|...++..|.++..+ .++++++. .+++++|++ +++||+|.+++.+++++|+++|++
T Consensus 99 li~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~ 166 (346)
T TIGR03576 99 VHYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKS 166 (346)
T ss_pred EECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEE-ECCCCCCcccCHHHHHHHHHHHHH
Confidence 975 579999999999999876332 14555433 235666666 567999999999999999999999
Q ss_pred cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-cc
Q 019298 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LG 283 (343)
Q Consensus 205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~ 283 (343)
+|+++|+||+|+.++.+.....+..... ..++++|||| +++|+|+||++++ +++++.+++.... ..
T Consensus 167 ~~~~livDEAy~~~~~~~~~~~~~~~~~---~divv~s~SK--alaG~r~G~v~~~--------~~li~~l~~~~~~~~~ 233 (346)
T TIGR03576 167 KEAIVLVDDASGARVRRLYGQPPALDLG---ADLVVTSTDK--LMDGPRGGLLAGR--------KELVDKIKSVGEQFGL 233 (346)
T ss_pred cCCEEEEECCccccccccCCCCCHHHcC---CcEEEeccch--hccccceEEEEeC--------HHHHHHHHHhhcCccc
Confidence 9999999999998754311111111121 2377889999 4789999999985 4788989887542 33
Q ss_pred CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 284 DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 284 ~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+++.|.++ .++|+... .-..++.++++++.+.+.++. +.+ .++.++|+|+++
T Consensus 234 s~~~~~~~aa-~~aL~~~~-~~~~~~~l~~r~~~~~~~l~~---~~~-~~~~~~f~~~~~ 287 (346)
T TIGR03576 234 EAQAPLLAAV-VRALEEFE-LSRIRDAFKRKEEVYLRLFDK---LNV-ERTPTGFVIKGV 287 (346)
T ss_pred CccHHHHHHH-HHHHhhcc-HHHHHHHHHHHHHHHHHHHHh---CCC-CcCCCeEEEEeC
Confidence 4677778777 66665422 223677888888888877774 344 344555899864
No 119
>PRK07049 methionine gamma-lyase; Validated
Probab=99.95 E-value=5.9e-26 Score=210.76 Aligned_cols=229 Identities=14% Similarity=0.137 Sum_probs=177.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g 145 (343)
+++|+.+ ....|++.+|++. ..+++++++|+++++..++.+++++||.|+++.|+|+.+...+ ...|
T Consensus 77 y~R~~~P-t~~~Le~~lA~le--------g~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~G 147 (427)
T PRK07049 77 YSRFNHP-NSEIVEDRLAVYE--------GAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFG 147 (427)
T ss_pred ccCCCCc-CHHHHHHHHHHHh--------CCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcC
Confidence 4567753 5689999999998 3567889999999999999999999999999999999987664 4568
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhc-----CCceEEEEeCCCCCcccccCHHHHHHHHHHHhh---cCcEEEEccCCCc
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLAD-----QNTVALVIINPGNPCGNVYSYQHLQKLAETANK---LKTLVIADEVYGH 217 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~---~~~~~i~D~ay~~ 217 (343)
.+++.++. ..|.+.+++.+. +++++|++++|+||||.+++.+++.++++.|+. +++++|+|++|..
T Consensus 148 i~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~ 221 (427)
T PRK07049 148 VGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG 221 (427)
T ss_pred cEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence 77666641 146677776653 468999999999999999999999999998754 6899999999876
Q ss_pred cccCCCCCCcccccCCCCCEEEEccCccccC-CCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHh
Q 019298 218 LVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMY 295 (343)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~ 295 (343)
..... ++ ..+..++++|+||.|+ .+|+|+||++++ ++++++++..... ....+++.+.++ .
T Consensus 222 ~~~~~----pl----~~g~divv~S~SK~~gG~~glr~G~vv~~--------~~l~~~l~~~~~~~g~~ls~~~a~l~-~ 284 (427)
T PRK07049 222 PVFQK----PL----EHGADLSVYSLTKYVGGHSDLVAGAVLGR--------KALIRQVRALRSAIGTQLDPHSCWML-G 284 (427)
T ss_pred cccCC----cc----ccCCCEEEEcCceeecCCCCcEEEEEECC--------HHHHHHHHHHHHhcCCCCCHHHHHHH-H
Confidence 43211 11 1234599999999999 499999999874 3688888776543 446788888877 4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 296 GCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 296 ~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
..|. .+..+.++..++++.+.+.|+++|++. ++.|
T Consensus 285 r~L~---tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp 320 (427)
T PRK07049 285 RSLE---TLVLRMERANRNARAVAEFLRDHPKVEKLHYL 320 (427)
T ss_pred cCCC---hHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 4443 334466777999999999999998877 5555
No 120
>PRK10534 L-threonine aldolase; Provisional
Probab=99.95 E-value=1.5e-26 Score=209.75 Aligned_cols=268 Identities=15% Similarity=0.105 Sum_probs=184.2
Q ss_pred eEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHH
Q 019298 38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM 117 (343)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~ 117 (343)
|||+... +.. ++|.+++++.+.... ...|.|..+..+|+++++++++ .+.+++++|+++++..++
T Consensus 2 ~~~~~~~----~~~-p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~g--------~~~~~v~~~g~~a~~~~l 66 (333)
T PRK10534 2 IDLRSDT----VTR-PSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELSG--------KEAALFLPTGTQANLVAL 66 (333)
T ss_pred ccccccc----CCC-CCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHhC--------CCeEEEeCchHHHHHHHH
Confidence 6777776 223 788999998775433 3578766788999999999982 345578888888888888
Q ss_pred HHhcCCCCeEEEeCCCCcc-hHHH-HHhcC-ceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCccc
Q 019298 118 ALLSRPGANILLPRPGFPI-YELS-AAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGN 188 (343)
Q Consensus 118 ~~l~~~gd~vl~~~p~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~ 188 (343)
.+++++||+|+++.|+|.. |... +...+ ...+.++.+ .++.+|+++|++++++ +++++++|||+ ||.
T Consensus 67 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~ 142 (333)
T PRK10534 67 LSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGK 142 (333)
T ss_pred HHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCe
Confidence 8888999999999888853 3321 23333 566666553 4578999999998865 57889999766 599
Q ss_pred ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE-EEEEeCCCCCCC
Q 019298 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG-WFVTTDPCGMFR 267 (343)
Q Consensus 189 ~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G-~i~~~~~~~~~~ 267 (343)
+++.+++++|+++|+++++++++||+|......... ..........+.+ +.||||.|+++ +| |++++
T Consensus 143 v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~-~~~~~~~~~~~~~-~~s~SK~~~~~---~G~~~~~~------- 210 (333)
T PRK10534 143 VLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYG-CELKEITQYCDSF-TICLSKGLGTP---VGSLLVGN------- 210 (333)
T ss_pred ecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcC-CCHHHHHhcCCEE-EEEeEcCCCCc---ccceEEcC-------
Confidence 999999999999999999999999998732211001 1111111111222 34899998764 68 56653
Q ss_pred chHHHHHHhhhhcccc---CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 268 KPKVVERMKKYFDILG---DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 268 ~~~~~~~l~~~~~~~~---~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++.+++...... ..+...+.++ ...|.+ ..+..++..++|+++.+.|+++ |+.+..+ +++|+|+++
T Consensus 211 -~~~i~~~~~~~~~~~~~~~~~~~~~a~~-~~~l~~---~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~-~~nfv~~~~ 282 (333)
T PRK10534 211 -RDYIKRARRWRKMTGGGMRQAGILAAAG-LYALKH---NVARLQEDHDNAAWLAEQLREA-GADVMRQ-DTNMLFVRV 282 (333)
T ss_pred -HHHHHHHHHHHHHhCCchhhHHHHHHHH-HHHHHh---hHHHHHHHHHHHHHHHHHHHhC-CCccCCC-CceEEEEEC
Confidence 578888887764221 2233445554 333332 2233444555778999999998 8887555 799999874
No 121
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.95 E-value=4.3e-26 Score=191.48 Aligned_cols=331 Identities=14% Similarity=0.135 Sum_probs=241.9
Q ss_pred cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhc-CCCCCCCCCCCC
Q 019298 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLS-EKFNGYAPTAGL 79 (343)
Q Consensus 2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~Y~~~~g~ 79 (343)
.+......++|. .++.+...+.++. .+.++||++|..+...+-| ..|.++++-.+...+ ...++|.|..|.
T Consensus 4 s~f~~I~~a~p~--~vf~~~~~y~~d~-----~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl 76 (410)
T KOG1412|consen 4 SFFANIPVAPPI--EVFKLNASYGEDL-----DPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGL 76 (410)
T ss_pred chhcCCccCChH--HHHhhHHHhcccC-----CcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCc
Confidence 344455566655 6788888888877 6788999999877655555 567777665555443 356799999999
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcE--EEecChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcC-ceeEEeecC
Q 019298 80 PLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRH-IEVRHFDLL 154 (343)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g-~~~~~~~~~ 154 (343)
+.|+++.++.+-+.....+..+++ +-+-|+++|+......|. -+..+|.+..|+|.+....++..| ..+..++..
T Consensus 77 ~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yW 156 (410)
T KOG1412|consen 77 PTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYW 156 (410)
T ss_pred hhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeee
Confidence 999999999985543344667776 456778999998877763 245689999999999999999999 456667776
Q ss_pred CCCCCCCCHHHHHhhhcCCc--eEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC--Cccc
Q 019298 155 PDKGWEVDLDDIESLADQNT--VALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF--VPMG 229 (343)
Q Consensus 155 ~~~~~~~d~~~l~~~~~~~~--~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~--~~~~ 229 (343)
..+.-.+|++.+...+...| ..++++.+ |||||...+.|+|.+|++..++.+.+.+.|-+|++|..++... ..++
T Consensus 157 d~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR 236 (410)
T KOG1412|consen 157 DAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIR 236 (410)
T ss_pred cCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHH
Confidence 66667899999988876533 34556666 9999999999999999999999999999999999998876532 2333
Q ss_pred ccCCC-CCEEEEccCccccCCCCCcEEEE--EEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhh---H
Q 019298 230 VFGST-VPILTLGSLSKRWIVPGWRLGWF--VTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTI---M 302 (343)
Q Consensus 230 ~~~~~-~~~i~~~S~sK~~~~~G~r~G~i--~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~---~ 302 (343)
.+-+. ..+++|.||+|.||+.+.|+|-+ ++.++..+ +.+..+|.... ...++|+.+....+ ...|+.+ .
T Consensus 237 ~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i---~~v~SQl~lviR~~~SNPPAyGArIV-~kvL~tP~lre 312 (410)
T KOG1412|consen 237 YFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVI---AGVKSQLTLVIRSNWSNPPAYGARIV-HKVLSTPELRE 312 (410)
T ss_pred HHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHH---HHHHHHHHHHHhhccCCCcchhhHHH-HHHhcCHHHHH
Confidence 33222 35899999999999999999984 44332211 12334444443 33567777777777 6677765 3
Q ss_pred HHHH----HHHHHHHHHHHHHHhhcCC--CC-ceeeCCCCceEeeecC
Q 019298 303 QIMI----HGNFLENFAGSCVPSYKLI--PE-LINFKSTGSSLKYLDL 343 (343)
Q Consensus 303 ~~l~----~~~~~~~~~~~~~~~L~~~--~g-~~~~~~~~g~~~~~~l 343 (343)
+|.. +-.++.+.|..+++.|..+ || |.....|-|||-|-.|
T Consensus 313 ~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGL 360 (410)
T KOG1412|consen 313 QWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGL 360 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCC
Confidence 4443 6667788888888888765 55 5555778899877543
No 122
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.95 E-value=3.7e-25 Score=202.83 Aligned_cols=263 Identities=13% Similarity=0.093 Sum_probs=183.0
Q ss_pred CCCcHHHHHHHHHHHhcCCC-----CCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC
Q 019298 51 FHTTHVATEAVAEALLSEKF-----NGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~-----~~Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~ 123 (343)
-+..+++.+++.+....... +... ...-..++++.+++++ ++ +++++++|+++++..++.+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~--~~i~~~~g~t~al~~~l~~~~~~ 82 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL------GM--DEARVTPGAREGKFAVMHSLCEK 82 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc------CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence 45778888888887632110 0111 1123568899999988 23 89999999999999999999999
Q ss_pred CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-------CCceEEEEeCCCCCcccccCHHHHH
Q 019298 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-------QNTVALVIINPGNPCGNVYSYQHLQ 196 (343)
Q Consensus 124 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-------~~~~~i~~~~p~nptG~~~~~~~l~ 196 (343)
||+|+++.++|......++..|++++.++.+.+.++.+|+++++++++ .+++++++++|+||||.. .+++
T Consensus 83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~---~~~~ 159 (361)
T cd06452 83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL---HDAK 159 (361)
T ss_pred CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee---ccHH
Confidence 999999999988777778889999999988765557899999998885 267899999999999988 6678
Q ss_pred HHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh
Q 019298 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK 276 (343)
Q Consensus 197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~ 276 (343)
+|+++|+++|+++|+|++|..... ......+ +..++++|+||+++. +.|+||++++ ++++++++
T Consensus 160 ~i~~~~~~~~~~vivD~a~~~g~~----~~~~~~~---~~d~~~~s~~K~l~~-~~~~G~l~~~--------~~~~~~l~ 223 (361)
T cd06452 160 KIAKVCHEYGVPLLLNGAYTVGRM----PVSGKEL---GADFIVGSGHKSMAA-SAPIGVLATT--------EEWADIVF 223 (361)
T ss_pred HHHHHHHHcCCeEEEECCcccCCc----CCCHHHc---CCCEEEecCCccccC-CCCeEEEEEC--------HHHHHHHh
Confidence 899999999999999999985221 1111122 345999999999874 4599999985 35777776
Q ss_pred hhhcc--------c-cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC--CCCceEeee
Q 019298 277 KYFDI--------L-GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK--STGSSLKYL 341 (343)
Q Consensus 277 ~~~~~--------~-~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~--~~~g~~~~~ 341 (343)
..... . .........++ .+++....+.++...+..++++++.+.|+++||+.+.. +...+|+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~ 298 (361)
T cd06452 224 RTSQMFKIKEVELLGCTLRGAPLVTL-MASFPHVKERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFF 298 (361)
T ss_pred ccccccccceeeeeccccCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEE
Confidence 54321 0 11111112222 22222112233334444455678889999998888642 334444433
No 123
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.95 E-value=2.4e-25 Score=205.92 Aligned_cols=273 Identities=16% Similarity=0.122 Sum_probs=197.9
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++++||+.+++ ++++++|.+.+++.+++.+. ....|....|.+++++++++++.+.++. ++.+++++| ++
T Consensus 32 g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG-~~ 104 (385)
T TIGR01825 32 GKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSG-FN 104 (385)
T ss_pred CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcH-HH
Confidence 788999999863 34778899999999988642 2346777789999999999999886662 456777777 56
Q ss_pred HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCCCCCcc
Q 019298 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPCG 187 (343)
Q Consensus 112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~nptG 187 (343)
++..++.+++++||.|+++.|+|..+...+...|.++..++ .+|++++++.+++ +++++++++++||||
T Consensus 105 a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG 177 (385)
T TIGR01825 105 TNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDG 177 (385)
T ss_pred HHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCC
Confidence 67788888899999999999999998877777787766542 3678888876653 567777778899999
Q ss_pred cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcc--cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCC
Q 019298 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM--GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265 (343)
Q Consensus 188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~--~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~ 265 (343)
.+.+ +++|.++|++||+++|+||+|..+.++....... .... .+.++++.||||.|+++| ||++++
T Consensus 178 ~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~----- 245 (385)
T TIGR01825 178 DVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGH----- 245 (385)
T ss_pred CccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecC-----
Confidence 9855 6788999999999999999998765542111111 1122 356899999999998766 998874
Q ss_pred CCchHHHHHHhhhhc-c-cc-CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298 266 FRKPKVVERMKKYFD-I-LG-DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS 337 (343)
Q Consensus 266 ~~~~~~~~~l~~~~~-~-~~-~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~ 337 (343)
+++++.+..... . .. ..++..+.++ .+++....++.+..+++.++++.+.+.|+++ |+++..+++.+
T Consensus 246 ---~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 315 (385)
T TIGR01825 246 ---KELIEYLKNRARPFLFSTAQPPAVVAAL-AAAVDELQRSPELMERLWDNTRFFKAGLGKL-GYDTGGSETPI 315 (385)
T ss_pred ---HHHHHHHHHhCccccccCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE
Confidence 367777765432 1 12 2345555555 4444322222346677788899999999887 78765666543
No 124
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.95 E-value=7.9e-26 Score=205.54 Aligned_cols=262 Identities=13% Similarity=0.091 Sum_probs=187.5
Q ss_pred CCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298 49 SCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL 128 (343)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl 128 (343)
+.+++++.+++++.++.... ..|.+.....++++.+++++ + ++++++++|+++++..+++.+.++||+|+
T Consensus 6 ~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~------g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~ 75 (338)
T cd06502 6 TVTGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF------G--KEAALFVPSGTAANQLALAAHTQPGGSVI 75 (338)
T ss_pred cCCCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh------C--CCeEEEecCchHHHHHHHHHhcCCCCeEE
Confidence 34678999999998865322 36766667788888888887 2 56788888889999999999999999999
Q ss_pred EeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-------CceEEEEeCCCCCcccccCHHHHHHH
Q 019298 129 LPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVIINPGNPCGNVYSYQHLQKL 198 (343)
Q Consensus 129 ~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~i~~~~p~nptG~~~~~~~l~~l 198 (343)
++.|+|..+.. .+...|.+++.++.+ .+.+|++++++++++ +++++++++|+|| |.+++.+++++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i 151 (338)
T cd06502 76 CHETAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAI 151 (338)
T ss_pred EecCcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHH
Confidence 99999976432 345578888888763 256999999999864 6789999999997 667799999999
Q ss_pred HHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298 199 AETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278 (343)
Q Consensus 199 ~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~ 278 (343)
+++|+++|+++|+|++|..+....... .+.......+ +++.|+||+|+++| |+++..+ ++++++++..
T Consensus 152 ~~~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~-------~~~~~~~~~~ 219 (338)
T cd06502 152 SALAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGN-------RDFIARARRR 219 (338)
T ss_pred HHHHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECC-------HHHHHHHHHH
Confidence 999999999999999986542211111 1111111122 56889999999887 5544422 4688887765
Q ss_pred hcc---ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEee
Q 019298 279 FDI---LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKY 340 (343)
Q Consensus 279 ~~~---~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~ 340 (343)
... ....+++.+.++ ..+|.. ..+.+.++++.++++++.+.|+.+ |+.+..+. +.|+.
T Consensus 220 ~~~~~~~~~~~~~~~~a~-~~~L~~-~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~-~~~~~ 280 (338)
T cd06502 220 RKQAGGGMRQSGFLAAAG-LAALEN-DLWLRRLRHDHEMARRLAEALEEL-GGLESEVQ-TNIVL 280 (338)
T ss_pred HHHhCCChhhHHHHHHHH-HHHhcC-chHHHHHHHHHHHHHHHHHHHHhc-CCCccccc-CCeEE
Confidence 421 234455666666 555554 245566678888889999999887 45543333 33333
No 125
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=6.2e-25 Score=201.73 Aligned_cols=261 Identities=13% Similarity=0.079 Sum_probs=181.3
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCC-------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC
Q 019298 53 TTHVATEAVAEALLSEKFNGYAP-------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA 125 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~Y~~-------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd 125 (343)
..+++.+++.+.-.....+++.. ..-...+++.+|++++ .+++++++|+++++..++.++.++||
T Consensus 20 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g--------~~~~~i~~g~~~a~~~~~~~l~~~gd 91 (370)
T TIGR02539 20 LTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLG--------MDEARVTHGAREGKFAVMHALCKEGD 91 (370)
T ss_pred CcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhC--------CCceEEECChHHHHHHHHHHhhCCCC
Confidence 55667777766543211111110 0124678888888882 35677899999999999999999999
Q ss_pred eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-------CceEEEEeCCCCCcccccCHHHHHHH
Q 019298 126 NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVIINPGNPCGNVYSYQHLQKL 198 (343)
Q Consensus 126 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~i~~~~p~nptG~~~~~~~l~~l 198 (343)
.|+++.+.|......++..|.+++.++...+.++.+|+++|++.++. ++++|++++|+||||... ++++|
T Consensus 92 ~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~---~l~~i 168 (370)
T TIGR02539 92 WVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLP---DAGKV 168 (370)
T ss_pred EEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcccc---CHHHH
Confidence 99999999766667788899999999876555688999999998852 577899999999999984 56778
Q ss_pred HHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298 199 AETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278 (343)
Q Consensus 199 ~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~ 278 (343)
+++|+++|+++|+|++|.....+ ...... +..++++|+||+|++ |.|+||++++ +++++.++..
T Consensus 169 ~~la~~~~~~livDea~~~g~~~----~~~~~~---~~di~v~s~sK~~~~-~g~~G~l~~~--------~~~i~~l~~~ 232 (370)
T TIGR02539 169 AKVCREKGVPLLLNCAYTVGRMP----VSAKEI---GADFIVGSGHKSMAA-SGPCGVLGMS--------EEWEDIVLRK 232 (370)
T ss_pred HHHHHHcCCeEEEECccccCCcC----CCHHHc---CCCEEEeeCcccccC-CCCEEEEEEC--------HHHHhhhccc
Confidence 88899999999999999974211 111111 234778999999874 6689999985 3678877765
Q ss_pred hccc---------cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee--eCCCCceEeeec
Q 019298 279 FDIL---------GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN--FKSTGSSLKYLD 342 (343)
Q Consensus 279 ~~~~---------~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~--~~~~~g~~~~~~ 342 (343)
...+ .......+.++ .+++.+..++++...+..++++++.+.|+++ |+.+ ..|+.++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~ 305 (370)
T TIGR02539 233 SRYSPVKEVELLGCTSRGAPIVTM-MASFPHVVERVKRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFE 305 (370)
T ss_pred ccCCccceeeeecccccccHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEE
Confidence 4210 11111133333 3344433344443334444456899999998 7774 357788888775
No 126
>PLN02721 threonine aldolase
Probab=99.94 E-value=5e-25 Score=201.47 Aligned_cols=277 Identities=16% Similarity=0.113 Sum_probs=181.1
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
..+++|+.+.+. . +++.+++++++.........|++ ...+|+++++++++. +.+++++++++++.
T Consensus 5 ~~~~~~~~~~~~----~-~~~~~~~a~~~~~~~~~~~~~~~--~~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~ 69 (353)
T PLN02721 5 SRVVDLRSDTVT----K-PTDAMRAAMANAEVDDDVLGYDP--TALRLEEEMAKIFGK--------EAALFVPSGTMGNL 69 (353)
T ss_pred hhhhhhhccccc----C-CCHHHHHHHHhccCCCcccCCCH--HHHHHHHHHHHHhCC--------ceeEEecCccHHHH
Confidence 356889999854 3 57888888876422222233433 368999999999942 33566666666666
Q ss_pred HHHHHhcC-CCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-------CCceEEEEeCC-
Q 019298 115 VAMALLSR-PGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-------QNTVALVIINP- 182 (343)
Q Consensus 115 ~~~~~l~~-~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-------~~~~~i~~~~p- 182 (343)
.++..+++ +||+|++++|+|..... .+...|.+++.++.+ .++.+|++++++.++ +++++++++++
T Consensus 70 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~ 147 (353)
T PLN02721 70 ISVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTH 147 (353)
T ss_pred HHHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccc
Confidence 77777777 99999999999864443 567789888888764 345689999999987 47888888775
Q ss_pred CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~ 262 (343)
+||||.+++.+++++|.++|+++|+++|+|++|.......... ....... ....++.|+||.|+. ++||++..+
T Consensus 148 ~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~~~~~~-~~d~~~~s~sK~l~~---~~G~~~~~~- 221 (353)
T PLN02721 148 ANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PVHRLVK-AADSVSVCLSKGLGA---PVGSVIVGS- 221 (353)
T ss_pred cccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CHHHHhh-hCCEEEEecccccCC---ceeeEEecC-
Confidence 7899999999999999999999999999999986422110011 1111111 112445579999764 357644322
Q ss_pred CCCCCchHHHHHHhhhhccc-cCcchHHHHHH-HhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee-eCCCCceEe
Q 019298 263 CGMFRKPKVVERMKKYFDIL-GDPATFIQVCI-MYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN-FKSTGSSLK 339 (343)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~a~-~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~-~~~~~g~~~ 339 (343)
+++++.+....... .........++ ....+ ..+++..++..++++.+.+.|++++++.+ ..+..++|+
T Consensus 222 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 292 (353)
T PLN02721 222 ------KSFIRKAKRLRKTLGGGMRQVGVLAAAALVAL---QENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIV 292 (353)
T ss_pred ------HHHHHhHHHHHHhcCCCeehhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEE
Confidence 46777766554321 12222222221 01112 23344444556778899999998878753 334445678
Q ss_pred eecC
Q 019298 340 YLDL 343 (343)
Q Consensus 340 ~~~l 343 (343)
|+++
T Consensus 293 ~~~~ 296 (353)
T PLN02721 293 YFDI 296 (353)
T ss_pred EEEc
Confidence 8764
No 127
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.94 E-value=8.9e-25 Score=203.57 Aligned_cols=271 Identities=14% Similarity=0.137 Sum_probs=186.5
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+++.++|+..+ |.+++.+|.+++++.+++..... ..|+......+|++.++++++ .++.+++++
T Consensus 45 ~~~~~~~~sn~---yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-------~~~~i~~~s 114 (410)
T PRK13392 45 PRRVTIWCSND---YLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-------KESALLFTS 114 (410)
T ss_pred CceEEEEECCC---ccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-------CCCEEEECc
Confidence 34578888866 45688899999999998864211 123222245789999999883 245666666
Q ss_pred ChHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh----cCCceEEEEeC
Q 019298 108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA----DQNTVALVIIN 181 (343)
Q Consensus 108 g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~----~~~~~~i~~~~ 181 (343)
| ++++..++..+.. +|+.|+++...|..+...++..|.++..++. + |.+.+++.+ .+++++|++++
T Consensus 115 G-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i~~ 186 (410)
T PRK13392 115 G-YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAFES 186 (410)
T ss_pred H-HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEEeC
Confidence 6 5677777776643 7898888888888877778888888766642 1 344444443 24678999999
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEEccCccccCCCCCcEEEEEEe
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTT 260 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~~~~G~r~G~i~~~ 260 (343)
|+||||.+++ +++|.++|+++|+++|+||+|....++..........+..++ .++++|+||+||++| ||++++
T Consensus 187 ~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~ 260 (410)
T PRK13392 187 VYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS 260 (410)
T ss_pred CCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC
Confidence 9999999976 778888888999999999999954443221111111111122 388999999999988 999874
Q ss_pred CCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298 261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS 337 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~ 337 (343)
+++++.+++... .+...++..+.++ .++|+......+.+++++++++.+.+.|+++ |+.+..+++++
T Consensus 261 --------~~~~~~l~~~~~~~~~s~~~~~~~~~a~-~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 330 (410)
T PRK13392 261 --------ADLIDFVRSFAPGFIFTTALPPAVAAGA-TAAIRHLKTSQTERDAHQDRVAALKAKLNAN-GIPVMPSPSHI 330 (410)
T ss_pred --------HHHHHHHHHhCcchhccCcCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE
Confidence 367887776543 1334555666666 5666543333346778899999999999988 78865566555
Q ss_pred E
Q 019298 338 L 338 (343)
Q Consensus 338 ~ 338 (343)
+
T Consensus 331 ~ 331 (410)
T PRK13392 331 V 331 (410)
T ss_pred E
Confidence 4
No 128
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.94 E-value=2.3e-24 Score=199.46 Aligned_cols=279 Identities=14% Similarity=0.128 Sum_probs=187.3
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+++++|||+.+++ .++.++|.+.+++.+++..-. ...|....|...+++.+++.+.+.++ .++.++++ +++
T Consensus 37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~-~g~ 109 (385)
T PRK05958 37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---AERALLFS-SGY 109 (385)
T ss_pred CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEEC-cHH
Confidence 4889999999862 235578999999999886411 11222223434444444444444333 24445554 555
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC---ceEEEEeCCCCCcc
Q 019298 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN---TVALVIINPGNPCG 187 (343)
Q Consensus 111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~i~~~~p~nptG 187 (343)
+++..+++.++++||.|+++.|+|+.+...+...|.+++.++. .|++.+++.+++. +.++++.+++|++|
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G 182 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDG 182 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCC
Confidence 6666777888999999999999999999888888988887753 3788998888652 44555556799999
Q ss_pred cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC--CCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCC
Q 019298 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265 (343)
Q Consensus 188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~--~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~ 265 (343)
.. .++++|+++|++||+++|+||+|+.+.++. ........+...++++++.|+||.|+.+| ||++++
T Consensus 183 ~~---~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~----- 251 (385)
T PRK05958 183 DL---APLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGS----- 251 (385)
T ss_pred Cc---CCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcC-----
Confidence 88 558889999999999999999997655442 22211112334457899999999998877 898774
Q ss_pred CCchHHHHHHhhhh-cc--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 266 FRKPKVVERMKKYF-DI--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 266 ~~~~~~~~~l~~~~-~~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
+++.+.+.... .. ....++....++ .++|+......+.++++.++++.+.+.|+.+ |+++..+.+ .|+|+.
T Consensus 252 ---~~~~~~~~~~~~~~~~~~~~~~~~~aa~-~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~-~~~~~~ 325 (385)
T PRK05958 252 ---ETLIDYLINRARPFIFTTALPPAQAAAA-RAALRILRREPERRERLAALIARLRAGLRAL-GFQLMDSQS-AIQPLI 325 (385)
T ss_pred ---HHHHHHHHHhCccceecCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCC-CEEEEE
Confidence 35666665432 11 223444444444 4555432222236788899999999999987 677655544 455654
No 129
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.94 E-value=3e-24 Score=199.71 Aligned_cols=280 Identities=15% Similarity=0.072 Sum_probs=192.6
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+++.++|..+. ..+++.+++++...+... ....|....+.+.+++.+++++.+.+|. +...|+++
T Consensus 18 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~v~~~- 88 (402)
T cd00378 18 QRETLELIASE------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA--EYANVQPH- 88 (402)
T ss_pred HHhCeeeeccC------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC--CceeeecC-
Confidence 35578887776 345889999987765321 1223444456677787766666555553 33455555
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH-----HHhcCceeEEeecCCC-CCCCCCHHHHHhhhc-CCceEEEEe
Q 019298 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELS-----AAFRHIEVRHFDLLPD-KGWEVDLDDIESLAD-QNTVALVII 180 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~-~~~~~i~~~ 180 (343)
|+++++..++.+++++||+|+++.|+|+.+... ++..|.++..+++..+ +++.+|++++++.+. +++++++++
T Consensus 89 sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~ 168 (402)
T cd00378 89 SGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAG 168 (402)
T ss_pred CcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEec
Confidence 457999999999999999999999999866443 5567777777766544 267899999999885 578888888
Q ss_pred CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCC-CccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY-GHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay-~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
+|+||+. .++++|+++|+++|+++|+|++| .++.+.+....++. . . .++++|+||+| +|+|.||+++
T Consensus 169 ~~~~~~~-----~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~--~-dv~~~s~sK~l--~G~~gg~i~~ 236 (402)
T cd00378 169 ASAYPRP-----IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--G--A-DVVTTTTHKTL--RGPRGGLILT 236 (402)
T ss_pred CcccCCC-----cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--C--C-cEEEeccccCC--CCCCceEEEe
Confidence 8888743 35788999999999999999996 44444442222222 1 1 27899999985 7899999998
Q ss_pred eCCCCCCCchHHHHHHhhhhc-cccCcch-HHHHHHHhccchhh-H-HHHHHHHHHHHHHHHHHHhhcCCCCceee-CCC
Q 019298 260 TDPCGMFRKPKVVERMKKYFD-ILGDPAT-FIQVCIMYGCLSTI-M-QIMIHGNFLENFAGSCVPSYKLIPELINF-KST 334 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~-~~~~a~~~~~l~~~-~-~~l~~~~~~~~~~~~~~~~L~~~~g~~~~-~~~ 334 (343)
++ ++++++++.... ...+.+. ....++ ..++... . .+-+.+++++++++.+.+.|.++ |+.+. .|+
T Consensus 237 ~~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 307 (402)
T cd00378 237 RK-------GELAKKINSAVFPGLQGGPHLHVIAAK-AVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGT 307 (402)
T ss_pred cc-------HHHHHHHHHHhCccccCCchHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCC
Confidence 53 357777766543 2222222 222222 2222221 2 22337788999999999999988 88854 568
Q ss_pred CceEeeecC
Q 019298 335 GSSLKYLDL 343 (343)
Q Consensus 335 ~g~~~~~~l 343 (343)
+++|+|+++
T Consensus 308 ~~~~v~v~~ 316 (402)
T cd00378 308 DNHLVLVDL 316 (402)
T ss_pred CCeEEEEeC
Confidence 899999874
No 130
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.93 E-value=3.3e-24 Score=199.10 Aligned_cols=286 Identities=15% Similarity=0.098 Sum_probs=191.9
Q ss_pred cccceeEeccCCCCCCCCCCC-cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHT-THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++..+||..|.+.. .++. +|.+.+++++++.... +....+..++++.+++++.+.. ..+++++++|+++
T Consensus 37 dg~~~iD~~~g~~~~--~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~----~~~~v~~~~gg~e 107 (396)
T PRK02627 37 DGKEYLDFLAGIAVN--NLGHCHPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELS----GMDKVFFCNSGAE 107 (396)
T ss_pred CCCEEEECCccHHhc--cCCCCCHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhc----CCCEEEECCCcHH
Confidence 378899999987652 3454 6999999999886531 1111233578888888887643 3489999999999
Q ss_pred HHHHHHHHhcCCC-------CeEEEeCCCCcchHHHHHhcCceeEE-eecCC-CCCC----CCCHHHHHhhhcCCceEEE
Q 019298 112 AIDVAMALLSRPG-------ANILLPRPGFPIYELSAAFRHIEVRH-FDLLP-DKGW----EVDLDDIESLADQNTVALV 178 (343)
Q Consensus 112 al~~~~~~l~~~g-------d~vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~-~~~~----~~d~~~l~~~~~~~~~~i~ 178 (343)
++..+++.+...+ ++|++..++|.++...+...+..... ....+ ..++ ..|++++++.+++++++++
T Consensus 108 A~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vi 187 (396)
T PRK02627 108 ANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVM 187 (396)
T ss_pred HHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEE
Confidence 9999999765322 68999999998876655544322111 00000 0111 1289999999987888888
Q ss_pred EeCCCCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298 179 IINPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 179 ~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
++.++||+| .+++.+.+++|.++|++||+++|+||+|.++.+.+.. .++.......+ +.||||.++ +|+|+||+
T Consensus 188 i~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~~~~pd---i~t~sK~~~-~G~rig~~ 262 (396)
T PRK02627 188 LEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHYGIEPD---IMTLAKGLG-GGVPIGAV 262 (396)
T ss_pred EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhcCCCCC---EEEEcchhh-CCcccEEE
Confidence 888899999 6889999999999999999999999999988665432 12222222223 236999998 89999999
Q ss_pred EEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhc----CCCCceeeC
Q 019298 258 VTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYK----LIPELINFK 332 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~----~~~g~~~~~ 332 (343)
++++ ++++.+.... ...++.+++.+.++ .++|+.... .+..++++++.+.+.+.|. .+|.+.. .
T Consensus 263 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa-~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~ 331 (396)
T PRK02627 263 LAKE--------KVADVFTPGDHGSTFGGNPLACAAA-LAVIEIIEE-EGLLENAAEVGEYLRAKLRELLEKYPGIKE-V 331 (396)
T ss_pred EEcH--------HHHhccCCCCCCCCCCCCHHHHHHH-HHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHHhCCCeee-e
Confidence 9853 5777766432 23557788888888 555542211 1134444444444444443 3433322 2
Q ss_pred CCCceEeeecC
Q 019298 333 STGSSLKYLDL 343 (343)
Q Consensus 333 ~~~g~~~~~~l 343 (343)
+..|+++|+++
T Consensus 332 ~~~g~~~~i~~ 342 (396)
T PRK02627 332 RGLGLMIGIEL 342 (396)
T ss_pred ccCcEEEEEEe
Confidence 33578888764
No 131
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.93 E-value=9.3e-24 Score=196.30 Aligned_cols=272 Identities=18% Similarity=0.176 Sum_probs=190.5
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCC------CCCCHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--GYAP------TAGLPLTRRAIAEYLSRDLPYKL-TPNDVFV 105 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~~------~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~ 105 (343)
.+.+.|+.+.. .+.++.+.+++.+.+.+...+ .... ....+++|+.+++++ +. ++++|++
T Consensus 18 ~~~~yld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~ 86 (401)
T PRK10874 18 DAGVYLDSAAT-----ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL------NAPDAKNIVW 86 (401)
T ss_pred CceEEEeCCcc-----cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc------CCCCCCEEEE
Confidence 35789998872 246788889988887642110 0000 112457888888888 44 6889999
Q ss_pred ecChHHHHHHHHHHh----cCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298 106 TSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (343)
Q Consensus 106 ~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 177 (343)
++|+++++..+++++ .++||+|++++|+|++ +...++..|.+++.++.+ .++.+|++++++.++++++++
T Consensus 87 ~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv 164 (401)
T PRK10874 87 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLG--ADRLPDVDLLPELITPRTRIL 164 (401)
T ss_pred ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecC--CCCcCCHHHHHHhcCcCcEEE
Confidence 999999999999998 3789999999999865 455667889999999875 345789999999998899999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
++++|+||||.+++ +++|+++|+++|+++|+|++|+...+. ..+... +..+++.|++|.||.+| +||+
T Consensus 165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~----~~~~~~---~~d~~~~s~~K~~gp~G--~G~l 232 (401)
T PRK10874 165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFP----ADVQAL---DIDFYAFSGHKLYGPTG--IGVL 232 (401)
T ss_pred EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCccccccc----CCchhc---CCCEEEEecccccCCCc--cEEE
Confidence 99999999999965 577888889999999999999753221 112222 23488899999988777 5888
Q ss_pred EEeCCCCCCCchHHHHHHhhhh---------------------cc-ccCcchHHHHHHHhccchhhH--HHHHHHHHHHH
Q 019298 258 VTTDPCGMFRKPKVVERMKKYF---------------------DI-LGDPATFIQVCIMYGCLSTIM--QIMIHGNFLEN 313 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~---------------------~~-~~~~~~~~~~a~~~~~l~~~~--~~l~~~~~~~~ 313 (343)
++++ ++++++.... .. .+.++.....++ .+++.... .+.+.+++.++
T Consensus 233 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al-~~al~~l~~~g~~~~~~~~~~ 303 (401)
T PRK10874 233 YGKS--------ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGL-SAALEWLADIDINQAESWSRS 303 (401)
T ss_pred EEch--------HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHH-HHHHHHHHHhCHHHHHHHHHH
Confidence 8743 4555543211 00 123343444444 33332111 11125777788
Q ss_pred HHHHHHHhhcCCCCceeeCCCCceEee
Q 019298 314 FAGSCVPSYKLIPELINFKSTGSSLKY 340 (343)
Q Consensus 314 ~~~~~~~~L~~~~g~~~~~~~~g~~~~ 340 (343)
.++.+.+.|+++||+.+..+..+.+++
T Consensus 304 l~~~l~~~l~~~~g~~~~~~~~~~i~~ 330 (401)
T PRK10874 304 LATLAEDALAKLPGFRSFRCQDSSLLA 330 (401)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCCcEEE
Confidence 889999999998898865544444444
No 132
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.93 E-value=7.9e-24 Score=196.59 Aligned_cols=272 Identities=16% Similarity=0.180 Sum_probs=188.7
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCC-------CCCHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-GYAPT-------AGLPLTRRAIAEYLSRDLPYKL-TPNDVFV 105 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~-------~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~ 105 (343)
.+.+.|+.+.. .+.++.+.+++.+.+.....+ .+... ...+++|+.+++++ +. ++++|++
T Consensus 15 ~~~iyld~a~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~ 83 (398)
T TIGR03392 15 DGTVYLDSAAT-----ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL------NAPDAENIVW 83 (398)
T ss_pred CCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEE
Confidence 35789998872 246788899988877532111 11111 12356888999988 34 4789999
Q ss_pred ecChHHHHHHHHHHh----cCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298 106 TSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (343)
Q Consensus 106 ~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 177 (343)
|+|+++++..++.++ .++||+|++++|+|++ +...++..|.+++.++++. ++.+|+++++++++++++++
T Consensus 84 t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv 161 (398)
T TIGR03392 84 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRIL 161 (398)
T ss_pred eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEE
Confidence 999999999999987 4789999999999865 4456678899999998753 35689999999998889999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
++++|+||||.+++ +++|+++|+++|+++++|++|+...+. ..+... +..+++.|++|.|+.+| +||+
T Consensus 162 ~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~----~~~~~~---~~d~~~~s~~K~~gp~G--~G~l 229 (398)
T TIGR03392 162 ALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGP----PDVQAL---DIDFYAFSGHKLYGPTG--IGVL 229 (398)
T ss_pred EEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCC----CChhhc---CCCEEEEecccccCCCc--eEEE
Confidence 99999999999965 577888899999999999999753221 122212 23378889999988776 8999
Q ss_pred EEeCCCCCCCchHHHHHHhhhh---------------------cc-ccCcchHHHHHHHhccchhhH--HHHHHHHHHHH
Q 019298 258 VTTDPCGMFRKPKVVERMKKYF---------------------DI-LGDPATFIQVCIMYGCLSTIM--QIMIHGNFLEN 313 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~---------------------~~-~~~~~~~~~~a~~~~~l~~~~--~~l~~~~~~~~ 313 (343)
+++. ++++++.... .. .+.++.....++ .+++.... .+.+.+++.++
T Consensus 230 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~-~~al~~l~~~g~~~i~~~~~~ 300 (398)
T TIGR03392 230 YGKT--------ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGL-SAALEWLTDIDIAAAEAWSVS 300 (398)
T ss_pred EEcH--------HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHH-HHHHHHHHHhCHHHHHHHHHH
Confidence 8753 4555443211 00 112333333333 33332111 11226677788
Q ss_pred HHHHHHHhhcCCCCceeeCCCCceEee
Q 019298 314 FAGSCVPSYKLIPELINFKSTGSSLKY 340 (343)
Q Consensus 314 ~~~~~~~~L~~~~g~~~~~~~~g~~~~ 340 (343)
.++.+.+.|.++||+.+..+..+.+++
T Consensus 301 l~~~l~~~l~~l~g~~~~~~~~~~i~~ 327 (398)
T TIGR03392 301 LADLAEERLAQLPGFRSFRCPGSSLLA 327 (398)
T ss_pred HHHHHHHHHhcCCCeEEeCCCCCcEEE
Confidence 889999999888888855443344443
No 133
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.93 E-value=5.4e-24 Score=194.75 Aligned_cols=232 Identities=18% Similarity=0.176 Sum_probs=175.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g 145 (343)
+.+|+. +...+|++.++++.+ .+..++++|+++++..++ .++++||+|+++.|+|+... ..+...|
T Consensus 46 y~r~~~-pt~~~le~~la~l~g--------~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 115 (366)
T PRK08247 46 YSRTGN-PTRGVLEQAIADLEG--------GDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWN 115 (366)
T ss_pred ccCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccC
Confidence 456665 356899999999983 234577888899999876 57789999999999998743 3445578
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.++..++. .|++++++++++++++|++++|+||+|.. .++++|+++|+++|+++|+|++|.......
T Consensus 116 ~~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~~~--- 182 (366)
T PRK08247 116 VRFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVLQR--- 182 (366)
T ss_pred ceEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccccC---
Confidence 88887754 37899999998889999999999998765 899999999999999999999996432211
Q ss_pred CcccccCCCCCEEEEccCccccCCC-CCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
+. ..+..++++|+||.++.+ +.+.|++++++ +++.++++..+.. ....+++.+.++ ...|+ .
T Consensus 183 -p~----~~g~di~i~S~sK~~~g~~d~~~G~iv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~-~~~l~---t 246 (366)
T PRK08247 183 -PL----EEGADIVIHSATKYLGGHNDVLAGLVVAKG-------QELCERLAYYQNAAGAVLSPFDSWLL-IRGMK---T 246 (366)
T ss_pred -ch----hcCCcEEEeecceeccCCCceeeeEEecCh-------HHHHHHHHHHHHhcCCCCChHHHHHH-HhccC---c
Confidence 11 123459999999998874 46899988753 3577777655543 345667767666 34443 2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC-CCceEee
Q 019298 304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS-TGSSLKY 340 (343)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~-~~g~~~~ 340 (343)
+..+.++.+++++.+.+.|+++|++. ++.| .||+|.|
T Consensus 247 l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf 285 (366)
T PRK08247 247 LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF 285 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE
Confidence 33356677999999999999999987 5555 8999987
No 134
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.93 E-value=3.3e-24 Score=197.95 Aligned_cols=282 Identities=16% Similarity=0.089 Sum_probs=189.2
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+.+.|||..|....+ ++ .+|.+.+++.+++.+.. ...|+. ....+|++.+++++ | .+++++++|++
T Consensus 26 g~~~id~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----g----~~~~~~~~sg~ 94 (379)
T TIGR00707 26 GKEYLDFVAGIAVNS--LGHAHPKLVEALKEQLEKLVHVSNLYYT-EPQEELAEKLVEHS----G----ADRVFFCNSGA 94 (379)
T ss_pred CCEEEEcCcchhhcc--CCCCCHHHHHHHHHHHhhccccccccCC-HHHHHHHHHHHhhC----C----CCEEEEeCCcH
Confidence 778999999865422 33 55899999999887531 123432 23445555555554 2 35999999999
Q ss_pred HHHHHHHHHhc---C----CCCeEEEeCCCCcchHHHHHhcCceeEE----eecCCCCCCCC--CHHHHHhhhcCCceEE
Q 019298 111 QAIDVAMALLS---R----PGANILLPRPGFPIYELSAAFRHIEVRH----FDLLPDKGWEV--DLDDIESLADQNTVAL 177 (343)
Q Consensus 111 ~al~~~~~~l~---~----~gd~vl~~~p~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~--d~~~l~~~~~~~~~~i 177 (343)
+++..+++.+. . ++|+|++++|+|+.+...+...+..... .++..+..+.. |++.+++.++++++++
T Consensus 95 ~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 174 (379)
T TIGR00707 95 EANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAV 174 (379)
T ss_pred HHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEE
Confidence 99999988662 2 3799999999998887766665543321 12221111111 7999999988778888
Q ss_pred EEeCCCCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298 178 VIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (343)
Q Consensus 178 ~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 256 (343)
+++.++||+|.. ++.+++++|.++|+++++++|+||+|.++.+.+.. .+........+++ +|||.++ +|+|+||
T Consensus 175 ~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~~---t~sK~~~-~G~riG~ 249 (379)
T TIGR00707 175 IVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDII---TLAKGLG-GGVPIGA 249 (379)
T ss_pred EEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCEE---EEccccc-CCcccEE
Confidence 886557788864 78999999999999999999999999987655432 1211122222333 6899998 9999999
Q ss_pred EEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC---CCceeeC
Q 019298 257 FVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI---PELINFK 332 (343)
Q Consensus 257 i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~---~g~~~~~ 332 (343)
++++ +++++.++... ....+.+++.|.++ .++|+.... .+.+++++++++.+.+.|+++ .++.. .
T Consensus 250 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa-~aaL~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~ 318 (379)
T TIGR00707 250 TLAK--------EEVAEAFTPGDHGSTFGGNPLACAAA-LAVLEVIEK-ERLLENVKEKGDYFKERLEELGKNYPNKE-V 318 (379)
T ss_pred EEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHH-HHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhhCCCCc-c
Confidence 9985 36888877642 23456788888888 555542111 125667777777777776653 12211 2
Q ss_pred CCCceEeeec
Q 019298 333 STGSSLKYLD 342 (343)
Q Consensus 333 ~~~g~~~~~~ 342 (343)
+..|+|+|++
T Consensus 319 ~~~g~~~~~~ 328 (379)
T TIGR00707 319 RGKGLMLGIE 328 (379)
T ss_pred ccCceEEEEE
Confidence 3468888875
No 135
>PRK07179 hypothetical protein; Provisional
Probab=99.93 E-value=8.4e-24 Score=196.82 Aligned_cols=273 Identities=14% Similarity=0.060 Sum_probs=189.8
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC---C--CCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE---K--FNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+...++|+..+ |.++..+|++++++.++++.- . ...|.. .....+|++.+++++ ..+.+++++
T Consensus 53 g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~--------g~~~~~~~~ 121 (407)
T PRK07179 53 GPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT--------GFESCLLCQ 121 (407)
T ss_pred CCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh--------CCCcEEEEC
Confidence 55567787766 456778899999999998641 1 112211 123578888898888 235678899
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCc
Q 019298 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPC 186 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~npt 186 (343)
|+++++..+++++..+||.|++..+.|......+...|.++..++. .|++++++.+++ ++++|++++++|||
T Consensus 122 sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~t 194 (407)
T PRK07179 122 SGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYSTT 194 (407)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCCC
Confidence 9999999999999999999999999998887777778887665532 489999998875 57788888999999
Q ss_pred ccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEEccCccccCCCCCcEEEEEEeCCCCC
Q 019298 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265 (343)
Q Consensus 187 G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~~~~G~r~G~i~~~~~~~~ 265 (343)
|.+.+ +++|.++|+++|+++|+||+|....++......+..++...+ .+++.|+||+++. |+||++++
T Consensus 195 G~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~----- 263 (407)
T PRK07179 195 GTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG---RAGIITCP----- 263 (407)
T ss_pred Ccccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc---cCeEEEeC-----
Confidence 99977 677888899999999999999865443222111222222122 4889999999863 68999885
Q ss_pred CCchHHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298 266 FRKPKVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL 341 (343)
Q Consensus 266 ~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~ 341 (343)
+++++.+..... ...++....+.++..+++......-+.+++++++++.+.+.|+++ |+.+. . .+.++++
T Consensus 264 ---~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~-~-~~~i~~l 335 (407)
T PRK07179 264 ---RELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL-GYNIR-S-ESQIIAL 335 (407)
T ss_pred ---HHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-C-CCCEEEE
Confidence 356666654422 122222223333223444332222237788999999999999988 77764 3 3455554
No 136
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.93 E-value=1.8e-23 Score=193.07 Aligned_cols=266 Identities=14% Similarity=0.065 Sum_probs=185.9
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC-------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~ 106 (343)
....|||.--. -.-++++++.+++.+....... ..+.......++|+.+|++++ .++++++
T Consensus 17 ~~~~~~~~~~~----~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~~~~~~ 84 (387)
T PRK09331 17 EEEFINLDPIQ----RGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MDEARVT 84 (387)
T ss_pred cccccccChhh----cCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CCcEEEe
Confidence 45567765433 1246788999999888743110 011112246889999999983 3578899
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-------CceEEEE
Q 019298 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVI 179 (343)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~i~~ 179 (343)
+|+++++..++.+++++||+|+++.++|......++..|++++.++...+.++.+|++++++.++. +++++++
T Consensus 85 ~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l 164 (387)
T PRK09331 85 HGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALL 164 (387)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEE
Confidence 999999999999999999999999999988777788899999999874335677999999998853 5789999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
++|+|+||.. .++++|+++|+++|+++|+|++|+.... +.....+ +..++++|++|++++ +.++||+++
T Consensus 165 ~~~~~~tG~~---~~l~~I~~la~~~g~~livD~a~~~g~~----~~~~~~~---g~D~~~~s~~K~l~~-~~~~G~l~~ 233 (387)
T PRK09331 165 THVDGNYGNL---ADAKKVAKVAHEYGIPFLLNGAYTVGRM----PVDGKKL---GADFIVGSGHKSMAA-SAPSGVLAT 233 (387)
T ss_pred ECCCCCCccc---ccHHHHHHHHHHcCCEEEEECCcccCCc----CCCHHHc---CCCEEEeeCcccccC-CCCEEEEEE
Confidence 9999999988 6688899999999999999999986221 1111222 234889999999764 458999988
Q ss_pred eCCCCCCCchHHHHHHhhhhc---------cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 260 TDPCGMFRKPKVVERMKKYFD---------ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
+ +++++.++.... .....+.....++ .+.+....+.++.+++..++.+.+.+.|++++|+++
T Consensus 234 ~--------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~ 304 (387)
T PRK09331 234 T--------EEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTL-MASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQ 304 (387)
T ss_pred C--------HHHHhhcccccCCCcccceeeeceecCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 5 356666544311 0111111111111 122222123333455566777788999999989886
Q ss_pred e
Q 019298 331 F 331 (343)
Q Consensus 331 ~ 331 (343)
.
T Consensus 305 ~ 305 (387)
T PRK09331 305 L 305 (387)
T ss_pred e
Confidence 5
No 137
>PLN02242 methionine gamma-lyase
Probab=99.93 E-value=2.6e-24 Score=199.10 Aligned_cols=219 Identities=16% Similarity=0.110 Sum_probs=165.8
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH-----HhcCceeEEe
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA-----AFRHIEVRHF 151 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~-----~~~g~~~~~~ 151 (343)
+...+|++.+|+++ ..+.+++++|+++++..++.+++++||.|+++.|.|+.+...+ +..|.+++.+
T Consensus 76 Pt~~~LE~~lA~l~--------g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~ 147 (418)
T PLN02242 76 PTVLNLGRQMAALE--------GTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV 147 (418)
T ss_pred hhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc
Confidence 45688999999998 3467889999999999999999999999999999998876654 3367676655
Q ss_pred ecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc
Q 019298 152 DLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV 230 (343)
Q Consensus 152 ~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~ 230 (343)
+. .|++++++++++ ++++|++++|+||||.+. ++++|+++|+++|+++|+|++|..+.+... .
T Consensus 148 d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~~------~ 211 (418)
T PLN02242 148 DI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSPA------R 211 (418)
T ss_pred CC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCHH------H
Confidence 43 278999999987 499999999999999995 678889999999999999999987654211 1
Q ss_pred cCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHHHHH
Q 019298 231 FGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQIMI 306 (343)
Q Consensus 231 ~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~l~ 306 (343)
+ +..++++|+||.++++|.++ ||++++ ++++++++.... ...+.+...|.+. ..++.. ..+..
T Consensus 212 ~---g~divv~S~SK~l~g~g~~~gG~iv~~--------~~li~~l~~~~~~~~~~~g~~~~~~~A~-l~~~~l-~tl~~ 278 (418)
T PLN02242 212 L---GADVVVHSISKFISGGADIIAGAVCGP--------AELVNSMMDLHHGALMLLGPTMNPKVAF-ELSERL-PHLSL 278 (418)
T ss_pred c---CCcEEEEeCccccCCCCCceEEEEEcC--------HHHHHHHHHHhhhhhhccCCCCCHHHHH-HHHcCC-CcHHH
Confidence 1 24599999999999999884 888864 367777776532 1233344444444 222221 22223
Q ss_pred HHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 307 HGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 307 ~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
++++++++++.+.+.|+++ ++.+..|
T Consensus 279 r~~~~~~~a~~la~~L~~~-~~~V~yP 304 (418)
T PLN02242 279 RMKEHCRRAMEYAKRMKEL-GLKVIYP 304 (418)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCEEECC
Confidence 7778999999999999998 5676555
No 138
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.93 E-value=1.3e-23 Score=191.91 Aligned_cols=271 Identities=17% Similarity=0.113 Sum_probs=182.8
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCC----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAP----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
.+++|+..+ +.+...+|++.+++++++++.. ..+|.. .....++++.+++++ + . ++.++++++
T Consensus 2 ~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~iv~~sg 70 (349)
T cd06454 2 KVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----G--K--EAALVFSSG 70 (349)
T ss_pred CceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----C--C--CCEEEeccH
Confidence 457787776 3445567999999999997521 112322 223356666666666 2 1 234555566
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----CceEEEEeCCCC
Q 019298 110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIINPGN 184 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~i~~~~p~n 184 (343)
++++..++++++++||.|++++|+|..+...+...|.+++.++. +|.+.+++.+++ +++++++++++|
T Consensus 71 ~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~ 143 (349)
T cd06454 71 YAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYS 143 (349)
T ss_pred HHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence 77888888888899999999999999988888888988877642 467788877753 456777889999
Q ss_pred CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCC-CCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (343)
Q Consensus 185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~ 263 (343)
|||... ++++|+++|+++|+++|+|++|+...++... ..........+.+++++|+||.|+++| ||++++
T Consensus 144 ~tG~~~---~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~--- 214 (349)
T cd06454 144 MDGDIA---PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGS--- 214 (349)
T ss_pred CCCCcc---CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECC---
Confidence 999984 5788889999999999999999753332111 100111123456799999999998766 888874
Q ss_pred CCCCchHHHHHHhhhhc-c--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEee
Q 019298 264 GMFRKPKVVERMKKYFD-I--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKY 340 (343)
Q Consensus 264 ~~~~~~~~~~~l~~~~~-~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~ 340 (343)
+++.+.++.... . ....++....++ .+.+....+..+.+++++++++.+.+.|.++ |+.+..+.++.+.+
T Consensus 215 -----~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~ 287 (349)
T cd06454 215 -----KELIDYLRSYARGFIFSTSLPPAVAAAA-LAALEVLQGGPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPP 287 (349)
T ss_pred -----HHHHHHHHHhchhhhccCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEE
Confidence 356666654422 1 223455545454 4444432222337888899999999999887 77754554555444
No 139
>PLN02483 serine palmitoyltransferase
Probab=99.93 E-value=1.3e-23 Score=198.31 Aligned_cols=274 Identities=12% Similarity=0.106 Sum_probs=185.5
Q ss_pred cccceeEeccCCCCCCCCCC-CcH----HHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTH----VATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV 105 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~----~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~ 105 (343)
...+.+||+..+ |.++. .++ .+.+++++.-.. +.-..|+...+..++++.+|++++ .++.+++
T Consensus 98 ~~~~~~n~~s~~---YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~ 167 (489)
T PLN02483 98 KTRRCLNLGSYN---YLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVF 167 (489)
T ss_pred CCceEEEeecCC---ccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEE
Confidence 467788888877 33444 233 444444443211 122247777788999999999994 3567777
Q ss_pred ecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-------CC-----
Q 019298 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-------QN----- 173 (343)
Q Consensus 106 ~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-------~~----- 173 (343)
++| ..+...++.+++++||.|++++|+|.++...++..|++++.++.. |.+.+++.++ ++
T Consensus 168 ~~G-~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~ 239 (489)
T PLN02483 168 GMG-YATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
T ss_pred CCH-HHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCC
Confidence 666 455557778889999999999999999999999999999988753 3455544432 11
Q ss_pred ceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC--CCCCcccccCCCCCEEEEccCccccCCC
Q 019298 174 TVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMGVFGSTVPILTLGSLSKRWIVP 250 (343)
Q Consensus 174 ~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~--~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 250 (343)
.++++++.+ .|++|.. .++++|+++|++||+++|+||+|+....+. .........+..+.+|+++||||+|++.
T Consensus 240 ~k~livve~v~s~~G~~---~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~ 316 (489)
T PLN02483 240 KKIIVIVEGIYSMEGEL---CKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC 316 (489)
T ss_pred ceEEEEECCCCCCCCcc---cCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC
Confidence 255666655 6999999 578888999999999999999998544332 2222222233345679999999999988
Q ss_pred CCcEEEEEEeCCCCCCCchHHHHHHhhhhc---cc-cCcchHHHHHHHhccch----h--hHHHHHHHHHHHHHHHHHHH
Q 019298 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFD---IL-GDPATFIQVCIMYGCLS----T--IMQIMIHGNFLENFAGSCVP 320 (343)
Q Consensus 251 G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~---~~-~~~~~~~~~a~~~~~l~----~--~~~~l~~~~~~~~~~~~~~~ 320 (343)
| ||++++ +++++.++.... .. ..+++..+.+. ++|. + .....+.+++++++++.+.+
T Consensus 317 G---G~i~~~--------~~li~~l~~~~~~~~~~~~~~p~~~~~~~--aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~ 383 (489)
T PLN02483 317 G---GYIAGS--------KELIQYLKRTCPAHLYATSMSPPAVQQVI--SAIKVILGEDGTNRGAQKLAQIRENSNFFRS 383 (489)
T ss_pred c---eEEEcC--------HHHHHHHHHhCccccccCCcCHHHHHHHH--HHHHHHHhCccccchHHHHHHHHHHHHHHHH
Confidence 7 999874 478888886532 12 22333444332 3332 1 11223477889999999999
Q ss_pred hhcCCCCceeeCCCCceEeee
Q 019298 321 SYKLIPELINFKSTGSSLKYL 341 (343)
Q Consensus 321 ~L~~~~g~~~~~~~~g~~~~~ 341 (343)
.|+++ |+.+..+.++..+|+
T Consensus 384 ~L~~~-G~~v~~~~~sp~~~l 403 (489)
T PLN02483 384 ELQKM-GFEVLGDNDSPVMPI 403 (489)
T ss_pred HHHHC-CCcccCCCCCCEEEE
Confidence 99998 787655555555443
No 140
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.92 E-value=1.4e-22 Score=188.62 Aligned_cols=267 Identities=17% Similarity=0.202 Sum_probs=187.0
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC----CCCC----CCCCHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN----GYAP----TAGLPLTRRAIAEYLSRDLPYKLT-PNDVF 104 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~ 104 (343)
+.+++.|+.+.. .++++.+.+++.+.+.....+ .+.. ....+++|+.+++++ +.+ +++|+
T Consensus 16 ~~~~~yld~~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------~~~~~~~v~ 84 (403)
T TIGR01979 16 GKPLVYLDSAAT-----SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI------NAASDEEIV 84 (403)
T ss_pred CCceEEEeCccc-----cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CcCCCCeEE
Confidence 557899999983 246788888888776532110 0100 113458889999988 345 67999
Q ss_pred EecChHHHHHHHHHHh----cCCCCeEEEeCCCCcch----HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298 105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (343)
Q Consensus 105 ~~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 176 (343)
+|+|+++++..++.++ .++||+|+++++.|++. ...+...|.+++.++.+ .++.+|++++++.+++++++
T Consensus 85 ~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~l 162 (403)
T TIGR01979 85 FTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKL 162 (403)
T ss_pred EeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCeE
Confidence 9999999999998875 57899999999988653 34556779999998876 34568999999999889999
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (343)
Q Consensus 177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 256 (343)
+++++|+||||..++ +++|+++|+++|+++|+|++|+... .+..+. ..+..+++.|++|.+|.+| +|+
T Consensus 163 v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~----~~~~~~---~~~~d~~~~s~~K~~gp~G--~g~ 230 (403)
T TIGR01979 163 VAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH----MPVDVQ---ALDCDFYVFSGHKMYGPTG--IGV 230 (403)
T ss_pred EEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc----cccCcc---ccCCCEEEEecccccCCCC--ceE
Confidence 999999999999976 6778888999999999999997532 111222 2234599999999987676 888
Q ss_pred EEEeCCCCCCCchHHHHHHhhhh---------------------cc-ccCcchHHHHHHHhccchhhHH--HHHHHHHHH
Q 019298 257 FVTTDPCGMFRKPKVVERMKKYF---------------------DI-LGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLE 312 (343)
Q Consensus 257 i~~~~~~~~~~~~~~~~~l~~~~---------------------~~-~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~ 312 (343)
++++. ++++++.... .. .+.++.....++ ..+++...+ .-+.+++..
T Consensus 231 l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al-~~al~~~~~~g~~~~~~~~~ 301 (403)
T TIGR01979 231 LYGKE--------ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGL-GAAIDYLEAIGLENIEAHEH 301 (403)
T ss_pred EEEch--------HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHH-HHHHHHHHHhCHHHHHHHHH
Confidence 88753 3444432110 00 112333333333 333322122 112678888
Q ss_pred HHHHHHHHhhcCCCCceeeCCC
Q 019298 313 NFAGSCVPSYKLIPELINFKST 334 (343)
Q Consensus 313 ~~~~~~~~~L~~~~g~~~~~~~ 334 (343)
+.++.+.+.|+.++|+++..|.
T Consensus 302 ~l~~~l~~~l~~~~g~~~~~~~ 323 (403)
T TIGR01979 302 ELTAYALERLGEIPGLRIYGPR 323 (403)
T ss_pred HHHHHHHHHHhcCCCEEEeCCC
Confidence 8899999999888888876554
No 141
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.92 E-value=1.9e-23 Score=193.06 Aligned_cols=221 Identities=15% Similarity=0.134 Sum_probs=165.0
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEE
Q 019298 75 PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRH 150 (343)
Q Consensus 75 ~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~ 150 (343)
+..+..+|+++++++++ .+++++++|+++++..++.+++++||+|+++.|.|+.+... +...|.+++.
T Consensus 62 ~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 133 (400)
T PRK06234 62 GNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTF 133 (400)
T ss_pred CCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEE
Confidence 44678999999999983 35678899999999999999999999999999999765543 4667888888
Q ss_pred eecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc--CcEEEEccCCCccccCCCCCCcc
Q 019298 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPM 228 (343)
Q Consensus 151 ~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~~~~~~~~~~~~~ 228 (343)
++. .|++++++++++++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|....+.. ++
T Consensus 134 vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~~----~l 199 (400)
T PRK06234 134 VDT-------SNLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQR----PL 199 (400)
T ss_pred ECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcCC----ch
Confidence 754 2789999999888999999999999999965 67777888886 99999999998765431 11
Q ss_pred cccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhh--hc-cccCcchHHHHHHHhccchhhHHH
Q 019298 229 GVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKY--FD-ILGDPATFIQVCIMYGCLSTIMQI 304 (343)
Q Consensus 229 ~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~--~~-~~~~~~~~~~~a~~~~~l~~~~~~ 304 (343)
. .+..++++|+||.++++|+++ ||++++ ++++++++.. .. .....++.....+ ...|+. +
T Consensus 200 -~---~g~Divv~S~sK~l~g~g~~~gG~v~~~--------~~~~~~l~~~~~~~~~g~~l~p~~a~l~-~~~l~t---l 263 (400)
T PRK06234 200 -Q---LGADVVVHSATKYLNGHGDVIAGFVVGK--------EEFINQVKLFGIKDMTGSVIGPFEAFLI-IRGMKT---L 263 (400)
T ss_pred -h---hCCcEEEeeccccccCCCCceeEEEEec--------HHHHHHHHHHHHHHhcCCCCCHHHHHHH-HhccCc---H
Confidence 1 134599999999999999876 888874 3577777643 22 2345566555544 333332 2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 305 MIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 305 l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
-.+.++..++...+.+.|+.+|.+. ++.|
T Consensus 264 ~~r~~~~~~na~~~a~~L~~~~~V~~V~~p 293 (400)
T PRK06234 264 QIRMEKHCKNAMKVAKFLESHPAVEKVYYP 293 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence 2255566678888888888876655 4444
No 142
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=1.6e-23 Score=194.50 Aligned_cols=287 Identities=16% Similarity=0.077 Sum_probs=189.7
Q ss_pred cccceeEeccCCCCCCCCCCC-cHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 33 NEKKVISLAMGDPTVHSCFHT-THVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
++++.+||..|.+.. .++. +|.+.+++++++++. ....|+.+.+ .+|.+.+++++ +. ..++++++++|+
T Consensus 41 dg~~~lD~~s~~~~~--~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~----~~-~~~~~v~~~~sg 112 (398)
T PRK03244 41 DGKEYLDLLGGIAVN--ALGHAHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL----GA-PEGGRVFFCNSG 112 (398)
T ss_pred CCCEEEECCcCHhhc--cCCCCCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC----CC-CCCCEEEEeCch
Confidence 478899999887552 3444 799999999998753 2234654322 44555555544 31 235799999999
Q ss_pred HHHHHHHHHHhcCCC-CeEEEeCCCCcchHHHHHhc-CceeEEeec---CCCCCC--CCCHHHHHhhhcCCceEEEEeCC
Q 019298 110 TQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFR-HIEVRHFDL---LPDKGW--EVDLDDIESLADQNTVALVIINP 182 (343)
Q Consensus 110 ~~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~-g~~~~~~~~---~~~~~~--~~d~~~l~~~~~~~~~~i~~~~p 182 (343)
++++..+++.+..+| +.|+..+++|+++...+... |........ ...... ..|++.+++.+.+++++++++.+
T Consensus 113 sea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep~ 192 (398)
T PRK03244 113 AEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFLEPI 192 (398)
T ss_pred HHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEEEEecc
Confidence 999999999776565 57777788998775544432 211111000 000000 03789999988777888888888
Q ss_pred CCCcccccCHHH-HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 183 GNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 183 ~nptG~~~~~~~-l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
+||+|.+++.++ +++|.++|++||+++|+||+|.++...+... .+...+..+++ .+|||+++ +|+|+||+++++
T Consensus 193 ~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pDi---~t~sK~l~-~G~~ig~~~~~~ 267 (398)
T PRK03244 193 QGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPDV---VTLAKGLG-GGLPIGACLAFG 267 (398)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCCE---EEEchhhh-CCcccEEEEEcH
Confidence 999999986654 9999999999999999999999876555321 11111212232 37899987 899999999963
Q ss_pred CCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-e-eCCCCceE
Q 019298 262 PCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-N-FKSTGSSL 338 (343)
Q Consensus 262 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~-~~~~~g~~ 338 (343)
++++.+... ...+++.+++.+.++ .+.|+... -.+..++++++++.+.+.|+++ ++. + .....|++
T Consensus 268 --------~~~~~~~~~~~~~t~~~~~~~~aaa-~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~ 336 (398)
T PRK03244 268 --------PAADLLTPGLHGSTFGGNPVACAAA-LAVLDTIA-SEGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLL 336 (398)
T ss_pred --------HHHhhccCCCCcCCCCCCHHHHHHH-HHHHHHHH-hccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEE
Confidence 577766543 233557788888888 44433111 0126677888888888888875 332 1 12236888
Q ss_pred eeecC
Q 019298 339 KYLDL 343 (343)
Q Consensus 339 ~~~~l 343 (343)
+|+.+
T Consensus 337 ~~i~~ 341 (398)
T PRK03244 337 LGIVL 341 (398)
T ss_pred EEEEE
Confidence 88753
No 143
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.92 E-value=7.5e-23 Score=188.80 Aligned_cols=226 Identities=18% Similarity=0.220 Sum_probs=163.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g 145 (343)
+.+|+. +....|++.+|++++ .+..+++++++.++..++.+++++||+|+++.|.|+.+... +...|
T Consensus 59 y~r~~~-p~~~~Le~~lA~l~G--------~~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G 129 (398)
T PRK07504 59 YSRYSN-PTVDMFEKRMCALEG--------AEDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYG 129 (398)
T ss_pred eecCCC-chHHHHHHHHHHHhC--------CCeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcC
Confidence 445654 356899999999983 33445677888999888888889999999999999875443 34567
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.++..++ .+|++++++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....+..
T Consensus 130 ~~v~~vd-------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~--- 196 (398)
T PRK07504 130 IESTLVD-------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQK--- 196 (398)
T ss_pred eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCC---
Confidence 7777763 26899999999889999999999999999976 6777888889999999999998654321
Q ss_pred CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH-HHHhhh-hccccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV-ERMKKY-FDILGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~-~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
+. .+ +..+++.|+||.|+++|+++|++++.++ +.+ +.++.. .......+++..+.+ ...| ..
T Consensus 197 -~~-~~---gaDivv~S~sK~l~g~g~~~GG~vv~~~-------~~i~~~~~~~~~~~g~~~s~~~A~~~-l~~L---~t 260 (398)
T PRK07504 197 -PL-EL---GAHIVVYSATKHIDGQGRCLGGVVLSDK-------AWIEEHLQDYFRHTGPSLSPFNAWTL-LKGL---ET 260 (398)
T ss_pred -ch-hh---CCCEEEeeccccccCCccceEEEEEeCc-------HHHHHHHHHHHHHhCCCCCHHHHHHH-Hhcc---ch
Confidence 11 11 3348999999999999999976555432 333 344433 222334555555554 3333 33
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+..+.++..++...+.+.|+++|++. ++.|
T Consensus 261 l~~R~~~~~~na~~la~~L~~~p~v~~v~yp 291 (398)
T PRK07504 261 LPVRVRQQTESAAAIADFLAGHPKVARVIYP 291 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence 44466677788888899999887765 4444
No 144
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.92 E-value=7.9e-23 Score=189.22 Aligned_cols=245 Identities=18% Similarity=0.129 Sum_probs=166.7
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
+++.++||..|.-..+.++ .+|.+.+++++++..... .+. ....+....+++.+.+.. ..+++++++|++++
T Consensus 29 dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~~~~sGseA 100 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSN-LYRIPEQERLAERLVENS----FADKVFFTNSGAEA 100 (389)
T ss_pred CCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--ccc-ccCChHHHHHHHHHHhhC----CCCEEEEcCCcHHH
Confidence 3788999988764332223 789999999999875211 111 112233344445443311 34799999999999
Q ss_pred HHHHHHHh----cCCCC----eEEEeCCCCcchHHHHHhcCceeEEeec-CC-CCCCC----CCHHHHHhhhcCCceEEE
Q 019298 113 IDVAMALL----SRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDL-LP-DKGWE----VDLDDIESLADQNTVALV 178 (343)
Q Consensus 113 l~~~~~~l----~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~----~d~~~l~~~~~~~~~~i~ 178 (343)
+..+++.+ ..+|| +|++.+++|+++...+...+........ .+ ..++. .|++.+++.+++++++|+
T Consensus 101 ~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avi 180 (389)
T PRK01278 101 VECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAIL 180 (389)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEE
Confidence 99998876 34565 8999999999887666555433222110 00 11111 589999999987788888
Q ss_pred EeCCCCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298 179 IINPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 179 ~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
++.++||+| .+++.+.+++|.++|++||+++|+||+|.++.+.+... ......-... +.|+||.++ +|+|+||+
T Consensus 181 vep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~~ 255 (389)
T PRK01278 181 IEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF-AHEWAGVTPD---IMAVAKGIG-GGFPLGAC 255 (389)
T ss_pred EecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce-eecccCCCCC---EEEEehhcc-CCcceEEE
Confidence 886688998 78899999999999999999999999999876655421 1111111112 348999987 89999999
Q ss_pred EEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccch
Q 019298 258 VTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLS 299 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~ 299 (343)
++++ ++.+.+.... ..+.+.+++.++++ .+.|+
T Consensus 256 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa-~a~l~ 289 (389)
T PRK01278 256 LATE--------EAAKGMTPGTHGSTYGGNPLAMAVG-NAVLD 289 (389)
T ss_pred EEcH--------HHHhccCCCCCCCCCCccHHHHHHH-HHHHH
Confidence 9863 5666665443 23556788888887 45543
No 145
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.92 E-value=2.1e-22 Score=187.47 Aligned_cols=266 Identities=16% Similarity=0.168 Sum_probs=185.5
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT--------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~--------~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~ 106 (343)
.+++.|+.+.. .+.++.+.+++.+.+.....+..... .-..++|+.++++++. .++++|++|
T Consensus 22 ~~~iYld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t 91 (406)
T PRK09295 22 LPLAYLDSAAS-----AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFV 91 (406)
T ss_pred CceEEEeCccc-----ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEe
Confidence 35789998872 35678888998887753211111100 1135788888888831 257899999
Q ss_pred cChHHHHHHHHHHh----cCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEE
Q 019298 107 SGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV 178 (343)
Q Consensus 107 ~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 178 (343)
+|+++++..+++++ .++||+|+++++.|++ +...++..|.+++.++++. ++.+|+++|++++++++++++
T Consensus 92 ~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~ 169 (406)
T PRK09295 92 RGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLLA 169 (406)
T ss_pred CCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEEE
Confidence 99999999998874 5789999999988864 4456677899999998753 456899999999988899999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE
Q 019298 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258 (343)
Q Consensus 179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~ 258 (343)
+++|+||||.+++ +++|+++|+++|+++++|++|+... .+..+.. .+..+++.|++|.+|.+| +||++
T Consensus 170 l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~---~~~D~~~~s~~K~~gp~G--~G~l~ 237 (406)
T PRK09295 170 ITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMH----HPVDVQA---LDCDFYVFSGHKLYGPTG--IGILY 237 (406)
T ss_pred EecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCc----cccCchh---cCCCEEEeehhhccCCCC--cEEEE
Confidence 9999999999976 5778888899999999999997632 1122222 223488999999887776 79998
Q ss_pred EeCCCCCCCchHHHHHHhhh-----------------------hccccCcchHHHHHHHhccchhhHH--HHHHHHHHHH
Q 019298 259 TTDPCGMFRKPKVVERMKKY-----------------------FDILGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLEN 313 (343)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~~ 313 (343)
+++ ++++.+... +...+.++.....++ .++++...+ +-+.+++.++
T Consensus 238 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l-~~al~~~~~~g~~~i~~~~~~ 308 (406)
T PRK09295 238 VKE--------ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGL-GAALDYVSALGLNNIAEYEQN 308 (406)
T ss_pred Ech--------HhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHH-HHHHHHHHHhCHHHHHHHHHH
Confidence 853 333332210 001223444444444 444432111 1126677888
Q ss_pred HHHHHHHhhcCCCCceeeCC
Q 019298 314 FAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 314 ~~~~~~~~L~~~~g~~~~~~ 333 (343)
.++.+.+.|.+++|+.+..|
T Consensus 309 l~~~l~~~l~~~~~~~~~~~ 328 (406)
T PRK09295 309 LMHYALSQLESVPDLTLYGP 328 (406)
T ss_pred HHHHHHHHHhcCCCEEEeCC
Confidence 88999999988888886555
No 146
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.92 E-value=1.5e-22 Score=188.11 Aligned_cols=269 Identities=14% Similarity=0.098 Sum_probs=182.8
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN------GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 108 (343)
++.++|+..+ |.++..+|++++++.++++.-... .|.......+|++.++++++ .+..+++++
T Consensus 45 ~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~s 113 (402)
T TIGR01821 45 KDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFTS 113 (402)
T ss_pred eeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEECc
Confidence 5678888887 567889999999999998752111 12222235678888888872 234566666
Q ss_pred hHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc---C-CceEEEEeCC
Q 019298 109 CTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---Q-NTVALVIINP 182 (343)
Q Consensus 109 ~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~-~~~~i~~~~p 182 (343)
+++++..++..+.. +++.|+.....|......+...|.++..++. .|.+++++.++ + ++++|++++|
T Consensus 114 G~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~~ 186 (402)
T TIGR01821 114 GYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFESV 186 (402)
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcCC
Confidence 68888888888764 6777777766777766677777777655432 25677776664 2 5678999999
Q ss_pred CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
+||+|.+.+ +++|.++|+++|+++|+||+|+...++..........+- ....++++||||+|++.| ||++++
T Consensus 187 ~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~- 259 (402)
T TIGR01821 187 YSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS- 259 (402)
T ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC-
Confidence 999999965 788888899999999999999854443221111111111 123588899999999988 998874
Q ss_pred CCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298 262 PCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS 337 (343)
Q Consensus 262 ~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~ 337 (343)
+++++.++.... .+...++..+.++ .++|+.....-+.++++.++++++.+.|+++ |+.+..+.+++
T Consensus 260 -------~~~~~~l~~~~~~~~~t~~~~~~~~aaa-~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i 329 (402)
T TIGR01821 260 -------RKLIDAIRSYAPGFIFTTSLPPAIAAGA-TASIRHLKESQDLRRAHQENVKRLKNLLEAL-GIPVIPNPSHI 329 (402)
T ss_pred -------HHHHHHHHHhCcCceecCcCCHHHHHHH-HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE
Confidence 367777765432 2334566666666 4555432222225666778889999999887 77765555443
No 147
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.92 E-value=8.6e-23 Score=187.27 Aligned_cols=226 Identities=18% Similarity=0.180 Sum_probs=168.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g 145 (343)
+.+|+. .....|++.++++.+ .+++++++|++++|..++.+++++||+|+++.|+|......+.. .+
T Consensus 45 Y~R~~~-p~~~~le~~lA~l~g--------~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 45 YSRSGN-PTRDLLQQALAELEG--------GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred ccCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 567765 356889999999882 47899999999999999999999999999999999865443322 23
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.++..++ ..|++.+++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+....
T Consensus 116 ~~v~~~d-------~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~--- 182 (382)
T TIGR02080 116 FRVLFVD-------QGDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQN--- 182 (382)
T ss_pred eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence 4444432 13789999999888999999999999999976 5677888889999999999998654221
Q ss_pred CcccccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
++. +. ..++++|+||.++. ++++.|++++.+ ++++++++..... ....+++....+ ..-| ..
T Consensus 183 -pl~-~g---aDivv~S~sK~l~G~~~~~~G~i~~~~-------~~~~~~l~~~~~~~g~~~sp~~a~l~-lr~l---~t 246 (382)
T TIGR02080 183 -PLA-LG---ADLVLHSCTKYLNGHSDVIAGAVIAKD-------PQVAEELAWWANNLGVTGGAFDSYLT-LRGL---RT 246 (382)
T ss_pred -chh-hC---CCEEEeecceeccCCCCceeEEEEeCC-------HHHHHHHHHHHHccCCCCCHHHHHHH-Hccc---ch
Confidence 111 11 23899999999875 678999988754 4677777766543 446677766555 2222 33
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+..+.++..++...+.+.|+.+|.+. |+.|
T Consensus 247 l~~R~~~~~~na~~~a~~L~~~p~v~~V~yP 277 (382)
T TIGR02080 247 LVARMRLQQRNAQAIVEYLQTQPLVKKIYYP 277 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 34467788889999999999887766 5554
No 148
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.92 E-value=1.3e-22 Score=186.85 Aligned_cols=219 Identities=18% Similarity=0.171 Sum_probs=163.2
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~ 153 (343)
-..+|++.+++++ ..+++++++|+++++..++.+++++||+|+++.+.|..... .+...|.+++.++.
T Consensus 62 ~~~~le~~la~l~--------g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 62 TVTMFQERLAALE--------GAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 4578899999988 34678999999999999999999999999999999976543 45567888888865
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
. |.+++++++++++++|++++|+||||.+. ++++|+++|+++|+++|+|++|....... ++ ..
T Consensus 134 ~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~---dl~~I~~la~~~gi~livD~t~~~~~~~~----pl-~~-- 196 (390)
T PRK08133 134 T-------DLDAWRAAVRPNTKLFFLETPSNPLTELA---DIAALAEIAHAAGALLVVDNCFCTPALQQ----PL-KL-- 196 (390)
T ss_pred C-------CHHHHHHhcCcCCeEEEEECCCCCCCCcC---CHHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh--
Confidence 2 68999999988999999999999999996 46888889999999999999997543221 11 11
Q ss_pred CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE 312 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~ 312 (343)
+..++++|+||.++.+|.++|++++.+ +++++++..... .....++..+.++ ++....+..+.++..
T Consensus 197 -g~Divv~S~sK~~~g~g~~~GG~vv~~-------~~~~~~~~~~~~~~g~~~~~~~a~~~----l~gl~tl~~R~~~~~ 264 (390)
T PRK08133 197 -GADVVIHSATKYLDGQGRVLGGAVVGS-------KELMEEVFGFLRTAGPTLSPFNAWVF----LKGLETLSLRMEAHS 264 (390)
T ss_pred -CCcEEEeecceeecCCcceEeEEEEcC-------HHHHHHHHHHHHHhCCCCCHHHHHHH----HcccchHHHHHHHHH
Confidence 224889999999999999986555433 245565554432 2334555554444 222133344667777
Q ss_pred HHHHHHHHhhcCCCCce-eeCC
Q 019298 313 NFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 313 ~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+++..+.+.|++.|++. ++.|
T Consensus 265 ~~a~~la~~L~~~p~v~~v~yp 286 (390)
T PRK08133 265 ANALALAEWLEAHPGVERVFYP 286 (390)
T ss_pred HHHHHHHHHHHhCCCeeEEECC
Confidence 88999999999988876 4444
No 149
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=1.6e-22 Score=186.31 Aligned_cols=220 Identities=15% Similarity=0.151 Sum_probs=164.5
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~ 152 (343)
+...+|++.++++.+ .+..++++++++++..++.+++++||+|+++.|+|.+... .+...|.++..++
T Consensus 64 p~~~~le~~lA~l~g--------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd 135 (398)
T PRK08249 64 PTVQAFEEKVRILEG--------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE 135 (398)
T ss_pred hHHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC
Confidence 456889999999983 3567777888999999999999999999999999987543 3455687776654
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
. .|++++++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+...... +.. .
T Consensus 136 ~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~----~l~-~- 199 (398)
T PRK08249 136 T-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN----PLA-L- 199 (398)
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC----chh-h-
Confidence 2 5899999999888999999999999999976 6678888999999999999999654321 111 1
Q ss_pred CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHH
Q 019298 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFL 311 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~ 311 (343)
+..++++|+||.++.+|.++|++++.+ ++++++++..... ....++..+..+ ...+ ..+..+.++.
T Consensus 200 --~~Divv~S~sK~l~g~~~~~gG~vv~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~-l~~l---~tL~~R~~~~ 266 (398)
T PRK08249 200 --GADLVIHSATKFLSGHADALGGVVCGS-------KELMEQVYHYREINGATMDPMSAYLI-LRGM---KTLKLRVRQQ 266 (398)
T ss_pred --CCCEEeccCceecCCCCCceEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-HhCc---chHHHHHHHH
Confidence 223888999999998888875544432 4677877766543 345666666655 3332 2333366777
Q ss_pred HHHHHHHHHhhcCCCCce-eeCC
Q 019298 312 ENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 312 ~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
.+++..+.+.|+++|.+. ++.|
T Consensus 267 ~~na~~la~~L~~~p~v~~V~yP 289 (398)
T PRK08249 267 QESAMALAKYLQTHPKVEAVYYP 289 (398)
T ss_pred HHHHHHHHHHHHcCCCeeEEECC
Confidence 888899999999887666 4444
No 150
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=2.2e-22 Score=187.06 Aligned_cols=264 Identities=18% Similarity=0.177 Sum_probs=181.4
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 108 (343)
..++++|++|.|. ++.++.+.++..++ . ....|.+ ..|.+++++++++++.+.+|. +.++++++++
T Consensus 19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~ 89 (398)
T cd00613 19 DQSMSFLGSGTYK----HNPPAVIKRNILEN--E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDE 89 (398)
T ss_pred ccCcccccccccC----CcCcHHHHHHhccc--c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCc
Confidence 4566999999954 66677777666655 2 2235665 678999999999999987764 4447766664
Q ss_pred hH-HHHHHHHHHhcCC--CCeEEEeCCCCcchHHHHHhcC----ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeC
Q 019298 109 CT-QAIDVAMALLSRP--GANILLPRPGFPIYELSAAFRH----IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN 181 (343)
Q Consensus 109 ~~-~al~~~~~~l~~~--gd~vl~~~p~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 181 (343)
++ ++...+..++..+ ||+|++++|.|+.+...+...| .+++.+++. +++.+|++++++.+.++++++++++
T Consensus 90 g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~t~~viv~~ 167 (398)
T cd00613 90 ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSD--EGGTVDLEALKEEVSEEVAALMVQY 167 (398)
T ss_pred hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccC--CCCCcCHHHHHHhcCCCeEEEEEEC
Confidence 44 4544555555565 9999999999999988888777 888888764 3456899999999988899999998
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCC----CCcEEEE
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP----GWRLGWF 257 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~----G~r~G~i 257 (343)
|+ |+|.+. +.+++|+++|+++|+++|+|+++....... ... ..+..++++|++|.+ .+ |+++||+
T Consensus 168 ~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~~----~~~---~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l 236 (398)
T cd00613 168 PN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGLK----PPG---EYGADIVVGNLQKTG-VPHGGGGPGAGFF 236 (398)
T ss_pred CC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCCC----ChH---HcCCCEEEeeccccC-CCCCCCCCceeEE
Confidence 85 899993 446999999999999999999876422110 111 113459999999997 55 7999999
Q ss_pred EEeCCCCCCCchHHHHHHhhh------------------------------hc-cccCcchHHHHHHHhccchhhHHHH-
Q 019298 258 VTTDPCGMFRKPKVVERMKKY------------------------------FD-ILGDPATFIQVCIMYGCLSTIMQIM- 305 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~------------------------------~~-~~~~~~~~~~~a~~~~~l~~~~~~l- 305 (343)
.+++ ++++.+... .. .....+...+.+. ..+.......+
T Consensus 237 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~-~~l~~~~~~g~~ 307 (398)
T cd00613 237 AVKK--------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAA-MYIVYLGPEGLK 307 (398)
T ss_pred EEhh--------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHH-HHHHHhCHHHHH
Confidence 9853 344432110 00 1111122223333 22221112233
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCc
Q 019298 306 IHGNFLENFAGSCVPSYKLIPEL 328 (343)
Q Consensus 306 ~~~~~~~~~~~~~~~~L~~~~g~ 328 (343)
+.+++++++++++.+.|+++++.
T Consensus 308 ~~~~~~~~~~~~l~~~L~~~~~~ 330 (398)
T cd00613 308 EIAERAHLNANYLAKRLKEVGGV 330 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCc
Confidence 37889999999999999887544
No 151
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=1.4e-22 Score=186.91 Aligned_cols=225 Identities=17% Similarity=0.192 Sum_probs=165.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc----hHHHHHhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~----~~~~~~~~g 145 (343)
+.+|+++ ....|++.++++.+ .++. ++++++++++..++.+++++||+|+++.|+|.. +...+...|
T Consensus 54 y~R~~~p-~~~~Le~~lA~l~g-------~~~~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g 124 (405)
T PRK08776 54 YTRSGNP-TRDLLGEALAELEG-------GAGG-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGH 124 (405)
T ss_pred ccCCCCh-HHHHHHHHHHHHhC-------CCce-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcC
Confidence 3445542 35678888888762 2344 555556899999999999999999999999987 334455567
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.++..++. .|++++++.++++++++++++|+||||.+ .++++|+++|+++|+++|+|++|..... .
T Consensus 125 ~~v~~v~~-------~d~~~l~~~i~~~tklV~l~~P~NPtG~v---~dl~~I~~la~~~gi~vIvD~a~a~~~~----~ 190 (405)
T PRK08776 125 FALITADL-------TDPRSLADALAQSPKLVLIETPSNPLLRI---TDLRFVIEAAHKVGALTVVDNTFLSPAL----Q 190 (405)
T ss_pred cEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcc---CCHHHHHHHHHHcCCEEEEECCCccccc----C
Confidence 77777643 37899999988889999999999999999 5688899999999999999999985321 1
Q ss_pred CcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
.++. +. ..+++.|.+|.++.+| ...|++++++ +++.++++..... ....+++.+.++ ... .+
T Consensus 191 ~pl~-~g---aDivv~S~tK~l~g~~~~~~G~vv~~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~-~~g----l~ 254 (405)
T PRK08776 191 KPLE-FG---ADLVLHSTTKYINGHSDVVGGAVVARD-------AELHQQLVWWANALGLTGSPFDAFLT-LRG----LR 254 (405)
T ss_pred Cccc-cc---CCEEEecCceeecCCCCceEEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hhh----hC
Confidence 1221 22 2389999999998764 6788887754 3577777654332 335677766666 222 34
Q ss_pred HHH-HHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 304 IMI-HGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 304 ~l~-~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+++ +.++..++...+.+.|+.+|.+. +..|
T Consensus 255 tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP 286 (405)
T PRK08776 255 TLDARLRVHQENADAIAALLDGHAAVNQVYYP 286 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence 555 78888899999999999888766 5554
No 152
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=1.8e-22 Score=185.25 Aligned_cols=226 Identities=16% Similarity=0.195 Sum_probs=168.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g 145 (343)
+.+|+.+ ....|++.+|++.+ .+.+++++|+++++..++.+++++||+|++++|+|+.....+.. .+
T Consensus 46 Y~R~~~p-t~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g 116 (386)
T PRK08045 46 YSRRGNP-TRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_pred eeCCCCc-cHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC
Confidence 5566663 56899999999983 34799999999999999999999999999999999864433222 23
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.++..++ ..|++++++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 117 i~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~---- 182 (386)
T PRK08045 117 YRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQ---- 182 (386)
T ss_pred eEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC----
Confidence 3454442 25789999999888999999999999999976 567777788999999999999874321
Q ss_pred CcccccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
.++. +.. .++++|++|.++. .+.+.|++++.+ ++++++++.... .....+++.+..+ ...|+ .
T Consensus 183 ~pl~-~ga---Divv~S~tK~l~G~~d~~~G~vi~~~-------~~~~~~l~~~~~~~g~~~~p~~~~l~-~rgl~---t 247 (386)
T PRK08045 183 NPLA-LGA---DLVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLL-LRGLR---T 247 (386)
T ss_pred Cchh-hCC---CEEEeecceeccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hhhhc---c
Confidence 1121 122 3899999999875 557889988753 457777765543 3456777777776 33332 2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+-.++++..+++..+.++|+.+|.+. |+.|
T Consensus 248 l~~R~~~~~~na~~la~~L~~~p~v~~V~yp 278 (386)
T PRK08045 248 LVPRMELAQRNAQAIVKYLQTQPLVKKLYHP 278 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEeEEECC
Confidence 23388889999999999999988776 5444
No 153
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.91 E-value=3e-22 Score=186.03 Aligned_cols=263 Identities=16% Similarity=0.179 Sum_probs=180.4
Q ss_pred eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCCCCCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEK---FNGYAPTAG----LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
.+.|+.+.+ .++++.+++++.+.+.... ...|....+ ..++|+.+++++ +.++++|++++|+
T Consensus 18 ~~yl~~~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~------~~~~~~v~~~~~~ 86 (397)
T TIGR01976 18 RVFFDNPAG-----TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL------NADPPEVVFGANA 86 (397)
T ss_pred eEEecCCcc-----CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEeCCH
Confidence 588888873 3577889999988875421 123544323 357788888877 3456689999999
Q ss_pred HHHHHHHHHHh---cCCCCeEEEeCCCCcchH----HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298 110 TQAIDVAMALL---SRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182 (343)
Q Consensus 110 ~~al~~~~~~l---~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p 182 (343)
++++..++.++ .++||+|++.+|.|.+.. ..++..|.+++.++++++ ++.+|++++++.++++++++++++|
T Consensus 87 t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~ 165 (397)
T TIGR01976 87 TSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAA 165 (397)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCC
Confidence 99998877775 579999999999986643 456778999999887643 3578999999999888999999999
Q ss_pred CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~ 262 (343)
+||||..++ +++|+++|+++|+++++|+++.. +.....+. ..+..+++.|++|.| |.|+|++++++
T Consensus 166 ~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~---~~~~d~~~~s~~K~~---g~~~G~l~~~~- 231 (397)
T TIGR01976 166 SNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDVQ---ATGADFLTCSAYKFF---GPHMGILWGRP- 231 (397)
T ss_pred CCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCHH---HcCCCEEEEechhhc---CCceEEEEEcH-
Confidence 999999964 78888889999999999999853 21111222 223347778999996 45689998853
Q ss_pred CCCCCchHHHHHHhhhhcc-----------ccCcchHHHHHHHhccchhhHH---------------HHH-HHHHHHHHH
Q 019298 263 CGMFRKPKVVERMKKYFDI-----------LGDPATFIQVCIMYGCLSTIMQ---------------IMI-HGNFLENFA 315 (343)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~-----------~~~~~~~~~~a~~~~~l~~~~~---------------~l~-~~~~~~~~~ 315 (343)
++++.+...... .+.++.....++ .+++....+ +++ .+++..+.+
T Consensus 232 -------~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l-~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (397)
T TIGR01976 232 -------ELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGV-VAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLA 303 (397)
T ss_pred -------HHHhhCCCccccCccCCCcchhcCCCCCHHHHHHH-HHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHH
Confidence 566555433210 111222222122 222221111 122 566677788
Q ss_pred HHHHHhhcCCCCceeeCC
Q 019298 316 GSCVPSYKLIPELINFKS 333 (343)
Q Consensus 316 ~~~~~~L~~~~g~~~~~~ 333 (343)
+.+.+.|++++++.+..+
T Consensus 304 ~~l~~~L~~~~~~~~~~~ 321 (397)
T TIGR01976 304 EYLLVGLSDLPGVTLYGV 321 (397)
T ss_pred HHHHHHHhcCCCEEEeCC
Confidence 888899988877886554
No 154
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.91 E-value=2.5e-22 Score=187.04 Aligned_cols=273 Identities=15% Similarity=0.115 Sum_probs=180.9
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+++.++|+..+ |.+++.+|.+.+++.+++..... ..|.+.....+|++.+++++. .++.+++++
T Consensus 45 ~~~~~~~~s~d---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-------~~~~~~~~s 114 (407)
T PRK09064 45 EREVTVWCSND---YLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-------KEAALVFTS 114 (407)
T ss_pred CceEEEEECCC---CcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-------CCcEEEECc
Confidence 35678998887 45688899999999998865311 113333345678888888772 244555555
Q ss_pred ChHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc----CCceEEEEeC
Q 019298 108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIIN 181 (343)
Q Consensus 108 g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~ 181 (343)
++++...++..+.. +++.|+.....|......+...+.++..++. .|++.+++.++ +++++|++++
T Consensus 115 -G~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~ 186 (407)
T PRK09064 115 -GYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFES 186 (407)
T ss_pred -HHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeC
Confidence 45676666776654 7777777777777666666767776655532 36777777664 3578899999
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEe
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT 260 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~ 260 (343)
++||+|.+.+ +++|.++|+++|+++|+||+|+...++..........+. ...+++++||||+||+.| ||++++
T Consensus 187 v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~ 260 (407)
T PRK09064 187 VYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGS 260 (407)
T ss_pred CCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecC
Confidence 9999999965 788888899999999999999844343221111111111 123688999999999888 998874
Q ss_pred CCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298 261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS 337 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~ 337 (343)
+++++.++.... .+...++..+.++ .+.++...+.-..+++++++++.+.+.|+++ |+.+..+. +.
T Consensus 261 --------~~~~~~l~~~~~~~~~t~~~~~~~~~aa-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~ 329 (407)
T PRK09064 261 --------AALVDAVRSYAPGFIFTTSLPPAIAAAA-LASIRHLKESNEERERHQERAAKLKAALDAA-GIPVMPNE-SH 329 (407)
T ss_pred --------HHHHHHHHHhCccccccCcCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCC-CC
Confidence 367777765432 1234555555555 3443322222125678889999999999887 77764444 44
Q ss_pred Eeee
Q 019298 338 LKYL 341 (343)
Q Consensus 338 ~~~~ 341 (343)
++++
T Consensus 330 iv~i 333 (407)
T PRK09064 330 IVPV 333 (407)
T ss_pred EEEE
Confidence 4443
No 155
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=2.2e-22 Score=185.28 Aligned_cols=220 Identities=18% Similarity=0.133 Sum_probs=161.2
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~ 152 (343)
....+|++++|++++ .+..++++++++++..++.+++++||+|+++.|+|......+.. .|.++..++
T Consensus 61 p~~~~Le~~lA~~~g--------~~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d 132 (388)
T PRK07811 61 PTRTALEEQLAALEG--------GAYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVD 132 (388)
T ss_pred ccHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeC
Confidence 567899999999984 23345556678999999999999999999999999865443322 466666554
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
. .|++++++.+++++++|++++|+||||.. .++++|+++|+++|+++|+|++|+...... ++. .
T Consensus 133 ~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~~----p~~-~- 196 (388)
T PRK07811 133 L-------SDLDAVRAAITPRTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQQ----PLA-L- 196 (388)
T ss_pred C-------CCHHHHHHhcCcCCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccCC----chh-h-
Confidence 3 47999999998899999999999999988 678888999999999999999998643221 111 1
Q ss_pred CCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298 233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNF 310 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~ 310 (343)
+..++++|++|.++.+| .+.||+++++ +++.++++..+.. ....++.....+ ...|+ .+-.+.++
T Consensus 197 --gaDivv~S~sK~l~g~~~~~gG~vv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~-~~~L~---tl~~R~~~ 263 (388)
T PRK07811 197 --GADVVVHSTTKYIGGHSDVVGGALVTND-------EELDEAFAFLQNGAGAVPGPFDAYLT-LRGLK---TLAVRMDR 263 (388)
T ss_pred --CCcEEEecCceeecCCCCcEEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-HhccC---cHHHHHHH
Confidence 22399999999998865 5679988754 3566766655443 334455544433 33333 23336666
Q ss_pred HHHHHHHHHHhhcCCCCce-eeCC
Q 019298 311 LENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 311 ~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
..++...+.+.|+.+|++. ++.|
T Consensus 264 ~~~na~~la~~L~~~p~v~~V~yP 287 (388)
T PRK07811 264 HSENAEAVAEFLAGHPEVSTVLYP 287 (388)
T ss_pred HHHHHHHHHHHHHhCCCeeEEECC
Confidence 7788888999999888876 5555
No 156
>PRK06460 hypothetical protein; Provisional
Probab=99.91 E-value=1.7e-22 Score=185.22 Aligned_cols=218 Identities=14% Similarity=0.090 Sum_probs=156.2
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCc----chHHHHHhcCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP----IYELSAAFRHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~----~~~~~~~~~g~~~~~~~ 152 (343)
....+|++++|++++ .. ..++ ++++++++..++.+++++||+|+++.|.|. .+...++..|.++..++
T Consensus 45 p~~~~L~~~lA~l~g------~~-~~v~-~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~ 116 (376)
T PRK06460 45 PTVLELTKKIVELEN------AE-MGVA-FSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASN 116 (376)
T ss_pred ccHHHHHHHHHHHhC------CC-cEEE-eCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEEC
Confidence 467899999999983 22 3444 455579999999999999999999987653 34556777898888775
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
.+ +.+.+++.++++++++++++|+||||.+++.+ +|+++|+++|+++|+|++|..... ..+ +
T Consensus 117 ~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~---~I~~la~~~g~~vivDea~~~~~~----~~~---l- 178 (376)
T PRK06460 117 PG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVDIT---ELSKVCKENGSILIVDATFSTPIN----QKP---L- 178 (376)
T ss_pred CC-------CHHHHHHhcCCCceEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcCcccc----CCh---h-
Confidence 42 22345555566889999999999999998764 577888899999999999975321 111 1
Q ss_pred CCCCEEEEccCccccCCC-CCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHH
Q 019298 233 STVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGN 309 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~ 309 (343)
..+..++++|+||.|+.. +.++||++++ ++++++++..... ..+.++.....+ ++. .++++ +++
T Consensus 179 ~~~~divv~S~sK~l~G~~~~~~G~~~~~--------~~l~~~l~~~~~~~g~~~~~~~a~~~----l~~-~~~l~~r~~ 245 (376)
T PRK06460 179 ELGADIVVHSASKFLAGHNDVIAGLAAGY--------GKLLNVIDQMRRTLGTSLDPHAAYLT----LRG-IKTLKIRMD 245 (376)
T ss_pred hcCCCEEEeecceeccCCCCceEEEEecC--------HHHHHHHHHHHHhcCCCCCHHHHHHH----Hhc-hhhHHHHHH
Confidence 113459999999998654 3789998874 4688888766532 223444332222 222 35555 888
Q ss_pred HHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 310 FLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 310 ~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
++.++++.+.+.|+++|.+. ++.|
T Consensus 246 ~~~~n~~~l~~~L~~~p~v~~v~yp 270 (376)
T PRK06460 246 VINRNAEQIAEFLEGHPKVVKVYYP 270 (376)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECC
Confidence 89999999999999888776 5444
No 157
>PRK02948 cysteine desulfurase; Provisional
Probab=99.91 E-value=2.5e-22 Score=185.46 Aligned_cols=262 Identities=15% Similarity=0.044 Sum_probs=180.9
Q ss_pred eEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT--------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~--------~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
+.|+.+.. .++++.+.+++.+.+.... .++... .-..++|+.+++++ +.++++|++++|+
T Consensus 2 ~yld~a~~-----~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~~~g~ 69 (381)
T PRK02948 2 IYLDYAAT-----TPMSKEALQTYQKAASQYF-GNESSLHDIGGTASSLLQVCRKTFAEMI------GGEEQGIYFTSGG 69 (381)
T ss_pred EeccCCCC-----CCCCHHHHHHHHHHHHhcC-CCCccccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcH
Confidence 44555542 3567889999988776321 111110 11346677777777 4578899999999
Q ss_pred HHHHHHHHHHhc----CCCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298 110 TQAIDVAMALLS----RPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182 (343)
Q Consensus 110 ~~al~~~~~~l~----~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p 182 (343)
++++..++.++. ++||+|++....|+++.. .++..|.+++.++++ .++.+|++++++.++++++++++++|
T Consensus 70 t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~~~~~ 147 (381)
T PRK02948 70 TESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVD--KSGLIRLVDLERAITPDTVLASIQHA 147 (381)
T ss_pred HHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeC--CCCCCCHHHHHHhcCCCCEEEEEECC
Confidence 999999888875 578999999977765544 456679999998875 34568999999999888899999999
Q ss_pred CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~ 262 (343)
+||||.+++ +++|.++|+++|+++++|+++.... ....+ ...+..+++.|+||.||.+| +|++++++.
T Consensus 148 ~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~g~----~~~~~---~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~ 215 (381)
T PRK02948 148 NSEIGTIQP---IAEIGALLKKYNVLFHSDCVQTFGK----LPIDV---FEMGIDSLSVSAHKIYGPKG--VGAVYINPQ 215 (381)
T ss_pred cCCcEeehh---HHHHHHHHHHcCCEEEEEChhhccc----cccCc---ccCCCCEEEecHHhcCCCCc--EEEEEEcCC
Confidence 999999965 6678888999999999997665421 11111 22235588999999998888 788887543
Q ss_pred CCCCCchHHHH-HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCcee
Q 019298 263 CGMFRKPKVVE-RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 263 ~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
.... .... .........+.++..++.++ .+++....++++ .++++++.++++.+.|+++ |+.+
T Consensus 216 ~~~~---~~~~~~~~~~~~~~~t~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v 280 (381)
T PRK02948 216 VRWK---PVFPGTTHEKGFRPGTVNVPGIAAF-LTAAENILKNMQEESLRFKELRSYFLEQIQTL-PLPI 280 (381)
T ss_pred CCCC---CcccCCCCCCCcCCCCccHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCE
Confidence 2100 0000 00000112456677777766 666655434444 8899999999999999988 6653
No 158
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.91 E-value=2.4e-22 Score=185.73 Aligned_cols=225 Identities=17% Similarity=0.170 Sum_probs=163.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g 145 (343)
+.+|+. +....|++.++++++ .++.+++++++.++..++.+++++||+|+++.|+|.... ..+...|
T Consensus 59 y~r~~~-p~~~~le~~lA~l~g--------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G 129 (403)
T PRK07503 59 YSRISN-PTLALLEQRMASLEG--------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFG 129 (403)
T ss_pred eeCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCC
Confidence 344544 356899999999983 244577778889999999999999999999999997533 3345678
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.++..++.. |++++++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+..... .
T Consensus 130 ~~v~~vd~~-------d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~-~-- 196 (403)
T PRK07503 130 VTVRHVDLT-------DPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ-R-- 196 (403)
T ss_pred EEEEEeCCC-------CHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC-C--
Confidence 888877642 689999999888999999999999999954 788888899999999999999864321 1
Q ss_pred CcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh--hcc-ccCcchHHHHHHHhccchhh
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--FDI-LGDPATFIQVCIMYGCLSTI 301 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~--~~~-~~~~~~~~~~a~~~~~l~~~ 301 (343)
++. + +..++++|+||.++.+| .+.|+++.+ ++++++++.. ... ....+++.++.+ ...|+
T Consensus 197 -~l~-~---g~Di~v~S~tK~l~g~gd~~gG~v~~~--------~~l~~~l~~~~~~~~~g~~~s~~~a~l~-l~~L~-- 260 (403)
T PRK07503 197 -PLE-L---GADLVVHSATKYLGGHGDITAGLVVGG--------KALADRIRLEGLKDMTGAVMSPFDAFLL-MRGLK-- 260 (403)
T ss_pred -chh-h---CCCEEEccccccccCCCceeEEEEEcC--------HHHHHHHHhhhHHhCcCCCCCHHHHHHH-HcCcc--
Confidence 111 1 23499999999999876 677887752 4677777633 322 345666666555 33332
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 302 MQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
.+-.+.++..++...+.+.|+.+|.+. ++.|
T Consensus 261 -tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P 292 (403)
T PRK07503 261 -TLALRMDRHCASAQAVAEWLARHPAVELVHYP 292 (403)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 233355556678888888898887766 4444
No 159
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.91 E-value=2.4e-22 Score=185.06 Aligned_cols=226 Identities=13% Similarity=0.115 Sum_probs=163.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g 145 (343)
..+|+. +....|++.+|++++ .+..+++++++.++..++.+++++||.|+++.|.|.... ..+...|
T Consensus 53 y~r~~~-p~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G 123 (391)
T TIGR01328 53 YSRLGN-PTVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFG 123 (391)
T ss_pred eeCCCC-chHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCC
Confidence 344554 345789999999983 345778888899999999999999999999999886533 3445578
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.++..++.+ |++++++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+......
T Consensus 124 ~~~~~vd~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~--- 190 (391)
T TIGR01328 124 IQVDFINMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTN--- 190 (391)
T ss_pred eEEEEECCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCC---
Confidence 888877652 689999999888999999999999999965 6778888899999999999998643321
Q ss_pred CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh--cc-ccCcchHHHHHHHhccchhhH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF--DI-LGDPATFIQVCIMYGCLSTIM 302 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~--~~-~~~~~~~~~~a~~~~~l~~~~ 302 (343)
++. .+..++++|+||.++++|.++|++++.+ ++++++++... .. ....++...+++ ...|+
T Consensus 191 -~~~----~g~Divv~S~sK~lgg~g~~~gG~v~~~-------~~li~~l~~~~~~~~~g~~l~~~~a~l~-l~~L~--- 254 (391)
T TIGR01328 191 -PVA----LGVDVVVHSATKYIGGHGDVVAGLICGK-------AELLQQIRMVGIKDMTGSVISPFDAWLI-LRGLK--- 254 (391)
T ss_pred -chh----cCCCEEEccccccccCCCCceEEEEEcC-------HHHHHHHHHHHHHhCCCCCCCcHHHHHH-HhCcC---
Confidence 111 1233899999999999998865444433 46777777542 12 234455544444 23332
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 303 QIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 303 ~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
.+..+.++..++...+.+.|+.+|++. ++.|
T Consensus 255 tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp 286 (391)
T TIGR01328 255 TLNIRMKRHSENAMKVAEYLKSHPAVEKVYYP 286 (391)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 333367777888888899999888766 4444
No 160
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.91 E-value=2.5e-22 Score=185.39 Aligned_cols=226 Identities=15% Similarity=0.106 Sum_probs=166.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc----hHHHHHhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~----~~~~~~~~g 145 (343)
+.+|+.+ ...+|++.+|++. ..++.+++++++.++..++.+++++||+|+++...|++ +...++..|
T Consensus 64 Y~r~~~p-~~~~le~~lA~l~--------g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G 134 (403)
T PRK07810 64 YSRYGNP-TVSMFEERLRLIE--------GAEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWG 134 (403)
T ss_pred eeCCCCc-hHHHHHHHHHHHh--------CCCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcC
Confidence 4566654 4789999999998 34588888888999999998899999999998866633 344566779
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.+++.++. .|++++++++++++++|++++|+||+|.+. ++++|+++|+++|+++|+|++|+...+..
T Consensus 135 ~~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~---dl~~I~~la~~~g~~vivD~a~a~~~~~~--- 201 (403)
T PRK07810 135 VETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLV---DIAAVSELAHAAGAKVVLDNVFATPLLQR--- 201 (403)
T ss_pred cEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCCccccCC---
Confidence 99888853 378999999988899999999999999995 57888888999999999999998654321
Q ss_pred CcccccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
+. .+ +..+++.|++|.++.+|.++ |++++++ ..+.++++.. .......+++.++++ ...| ..
T Consensus 202 -~~-~~---gaDivv~S~tK~l~g~g~~~gG~v~~~~-------~~~~~~l~~~~~~~g~~~s~~~a~l~-l~~L---~t 265 (403)
T PRK07810 202 -GL-PL---GADVVVYSGTKHIDGQGRVLGGAILGDR-------EYIDGPVQKLMRHTGPALSAFNAWVL-LKGL---ET 265 (403)
T ss_pred -hh-hc---CCcEEEccCCceecCCcCceeEEEEeCh-------HHHHHHHHHHHHHhCCCCCHHHHHHH-Hhcc---Cc
Confidence 11 11 23489999999999999988 6666542 1233345543 222346677766666 3333 23
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+..+.++..++...+.++|+++|++. ++.|
T Consensus 266 l~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP 296 (403)
T PRK07810 266 LALRVRHSNASALRIAEFLEGHPAVRWVRYP 296 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 33477777778888888999888776 5444
No 161
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.91 E-value=3.7e-22 Score=183.49 Aligned_cols=225 Identities=19% Similarity=0.223 Sum_probs=165.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcch----HHHHHhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY----ELSAAFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~----~~~~~~~g 145 (343)
+.+|+. ....+|++.++++++ .+.+++++|+++++..++.+++++||+|+++.+.|... ...+...|
T Consensus 48 y~r~~~-p~~~~le~~la~l~g--------~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g 118 (380)
T TIGR01325 48 YSRYAN-PTVAAFEERIAALEG--------AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFG 118 (380)
T ss_pred eecCCC-chHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhC
Confidence 455654 346899999999882 36788899999999999999999999999999988653 33456678
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.++..++.. |++++++++++++++|++++|+||+|.+. ++++|.++|+++|+++|+|++|.......
T Consensus 119 ~~v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~---dl~~I~~la~~~gi~livD~a~~~~~~~~--- 185 (380)
T TIGR01325 119 IEVSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELV---DIAALAELAHAIGALLVVDNVFATPVLQQ--- 185 (380)
T ss_pred CEEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence 888877642 68999998888899999999999999995 57888888999999999999998643221
Q ss_pred CcccccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
++ .+ +..+++.|+||.++.+|.++ |+++++ +++++.++.... .....++....++ ...+ ..
T Consensus 186 -pl-~~---g~Divv~S~sK~l~g~g~~~gG~vv~~--------~~~~~~l~~~~~~~g~~~~p~~a~~~-l~~l---~t 248 (380)
T TIGR01325 186 -PL-KL---GADVVVYSATKHIDGQGRVMGGVIAGS--------EELMAEVAVYLRHTGPAMSPFNAWVL-LKGL---ET 248 (380)
T ss_pred -ch-hh---CCCEEEeeccceecCCCCeEEEEEEeC--------HHHHHHHHHHHHhhCCCCCHHHHHHH-Hhcc---Cc
Confidence 11 11 23488999999999999887 555553 357777765532 2334444444333 2222 22
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+..+.++..+++..+.+.|+++|++. +..|
T Consensus 249 l~~r~~~~~~~a~~la~~L~~~p~v~~V~yp 279 (380)
T TIGR01325 249 LSLRMQKQFDSALAIAEWLQAQPQVQAVYYP 279 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence 33377778888999999999988766 4444
No 162
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.90 E-value=6.3e-22 Score=185.24 Aligned_cols=266 Identities=14% Similarity=0.193 Sum_probs=183.5
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--C---CCC---CCCCHHHHHHHHHHHhhhCCCCCC-CCcEEE
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--G---YAP---TAGLPLTRRAIAEYLSRDLPYKLT-PNDVFV 105 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---Y~~---~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~ 105 (343)
.+.+.|+.+.. .++++.+.+++.+.+.+...+ . |.. .....++|+.++++++ .. +++|++
T Consensus 31 ~~~iyLd~a~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~ 99 (424)
T PLN02855 31 SKLVYLDNAAT-----SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN------ASTSREIVF 99 (424)
T ss_pred CCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC------CCCCCEEEE
Confidence 45799999873 356788889988876532111 1 110 0123578889999883 33 579999
Q ss_pred ecChHHHHHHHHHHh----cCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298 106 TSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (343)
Q Consensus 106 ~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 177 (343)
|+|+++++..+++.+ .++||+|+++.+.|++ +...++..|.+++.++++.+ ..+|++++++.++++++++
T Consensus 100 t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~lv 177 (424)
T PLN02855 100 TRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKLV 177 (424)
T ss_pred eCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCceEE
Confidence 999999999998863 5789999999998864 44556778999999987643 3489999999998889999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
++++++||||..++. ++|+++|+++|+++++|++|... ..+..+. ..+..+++.|++|.+|.+| +||+
T Consensus 178 ~i~~~~n~tG~~~~~---~~I~~l~~~~g~~vivD~a~~~g----~~~~~~~---~~~~d~~~~s~~K~~gp~G--~G~l 245 (424)
T PLN02855 178 ATHHVSNVLGSILPV---EDIVHWAHAVGAKVLVDACQSVP----HMPVDVQ---TLGADFLVASSHKMCGPTG--IGFL 245 (424)
T ss_pred EEeCccccccccCCH---HHHHHHHHHcCCEEEEEhhhhcC----CcCCCch---hcCCCEEEeecccccCCCc--cEEE
Confidence 999999999999874 67788889999999999999642 1111222 2223488999999877666 8999
Q ss_pred EEeCCCCCCCchHHHHHHhhhh---------------------ccccCcchHHHHHHHhccchhhHH--HHHHHHHHHHH
Q 019298 258 VTTDPCGMFRKPKVVERMKKYF---------------------DILGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLENF 314 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~---------------------~~~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~~~ 314 (343)
+++. ++++++.... ....+.+.+...+...++++...+ +-+.+++..+.
T Consensus 246 ~~~~--------~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l 317 (424)
T PLN02855 246 WGKS--------DLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVEL 317 (424)
T ss_pred EEch--------hhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 8853 3444332110 011112333333332444432111 11267778888
Q ss_pred HHHHHHhhcCCCCceeeCC
Q 019298 315 AGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 315 ~~~~~~~L~~~~g~~~~~~ 333 (343)
++.+.+.|.+++|++++.+
T Consensus 318 ~~~l~~~L~~~~g~~i~~~ 336 (424)
T PLN02855 318 GTYLYEKLSSVPGVRIYGP 336 (424)
T ss_pred HHHHHHHHhcCCCEEEeCC
Confidence 9999999988888886543
No 163
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.90 E-value=6.7e-22 Score=182.13 Aligned_cols=225 Identities=16% Similarity=0.106 Sum_probs=160.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g 145 (343)
+.+|+. +...+|++.+|++++ .++.+++++++.++..++.+++++||+|+++.|.|......+.. .|
T Consensus 55 y~r~~~-pt~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g 125 (386)
T PRK06767 55 YSRLGN-PTVKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFM 125 (386)
T ss_pred ccCCCC-cchHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcC
Confidence 445554 356899999999983 24455566667899999989999999999999998776554433 35
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.++..++. .|++++++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... .
T Consensus 126 i~~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~-~-- 192 (386)
T PRK06767 126 ITHSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ-R-- 192 (386)
T ss_pred eEEEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC-C--
Confidence 54444422 3789999999888999999999999999965 677788888999999999999753322 1
Q ss_pred CcccccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhh-hhc-cccCcchHHHHHHHhccchhhH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKK-YFD-ILGDPATFIQVCIMYGCLSTIM 302 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~~~~~~a~~~~~l~~~~ 302 (343)
++. . +..+++.|+||.++++|.++ ||+++++ ++++++.. ... .....+++.++++ ...|+
T Consensus 193 -pl~-~---g~Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~-~~~L~--- 255 (386)
T PRK06767 193 -PLE-L---GCDAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLL-LRGLK--- 255 (386)
T ss_pred -chh-c---CCcEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHH-HcCCC---
Confidence 111 1 22388999999999999986 7888753 45555432 222 2234455555554 33333
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 303 QIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 303 ~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
....+.++.+++...+.+.|+++|++. +..|
T Consensus 256 tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p 287 (386)
T PRK06767 256 TLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP 287 (386)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence 222366788999999999999999988 5544
No 164
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=7.1e-22 Score=181.96 Aligned_cols=226 Identities=16% Similarity=0.098 Sum_probs=168.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g 145 (343)
+.+|+. +...+|++.++++. ..+++++++|+++++..++.+++++||+|+++.|+|..+.. .+...|
T Consensus 59 Y~r~~~-pt~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~G 129 (394)
T PRK07050 59 YGLHAT-PTSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFG 129 (394)
T ss_pred cCCCCC-HHHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcC
Confidence 455544 34678888898887 35799999999999999999999999999999999998663 456678
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
+++..++.. +.+.+++++++++++|++++|+||+|.. .++++|+++|+++|+++|+|++|....+-
T Consensus 130 i~v~~vd~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~~---- 195 (394)
T PRK07050 130 ITVRFYDPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLAF---- 195 (394)
T ss_pred eEEEEECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCccccccc----
Confidence 888877531 3577888888899999999999999866 89999999999999999999999863321
Q ss_pred CcccccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
.+. .. +..+++.|++|.++. .+.+.|++++.+ +++.++++..+. ...+.++.....+ ...| ..
T Consensus 196 ~~l-~~---GaDi~v~S~tK~~~g~~~~~gG~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~-lr~l---~t 260 (394)
T PRK07050 196 KPF-EH---GVDISVQALTKYQSGGSDVLMGATITAD-------AELHAKLKLARMRLGIGVSADDCSLV-LRGL---PS 260 (394)
T ss_pred CHH-Hc---CCeEEEEECCceecCCCCeeEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-HcCC---Cc
Confidence 111 11 235999999999875 446789888754 467777776654 2445666655444 2223 23
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+..+.++..++...+.+.|+++|++. ++.|
T Consensus 261 l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p 291 (394)
T PRK07050 261 LQVRLAAHDRSALEVAEWLKARPEIATVLHP 291 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 44466777777778888998887766 4433
No 165
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.90 E-value=7.7e-22 Score=180.93 Aligned_cols=220 Identities=15% Similarity=0.105 Sum_probs=167.1
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~ 152 (343)
....+|++.++++++ .+..++++++++|+..++.+++++||+|+++.++|..... .+...|.++..++
T Consensus 40 p~~~~le~~la~l~g--------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 111 (369)
T cd00614 40 PTVDALEKKLAALEG--------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVD 111 (369)
T ss_pred hhHHHHHHHHHHHHC--------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeC
Confidence 457889999999883 3577888888999999999999999999999999987654 3446688877775
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
.+ |++++++++++++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|+...+. .+.
T Consensus 112 ~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~----~~~---- 173 (369)
T cd00614 112 PD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ----RPL---- 173 (369)
T ss_pred CC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC----Chh----
Confidence 42 589999999888999999999999999965 778889999999999999999865431 111
Q ss_pred CCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298 233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNF 310 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~ 310 (343)
..+..+++.|+||.++.+| .+.||+++++ .+++++++.... .....++....++ ...|+ ....++++
T Consensus 174 ~~g~Divv~S~tK~l~g~~~~~gG~v~~~~-------~~l~~~l~~~~~~~g~~~~p~~a~~~-l~~l~---tl~~r~~~ 242 (369)
T cd00614 174 ELGADIVVHSATKYIGGHSDVIAGVVVGSG-------EALIQRLRFLRLALGTILSPFDAWLL-LRGLK---TLPLRMER 242 (369)
T ss_pred hhCCcEEEeccceeccCCCCceEEEEEeCc-------HHHHHHHHHHHHhhCCCCCHHHHHHH-HcCCC---CHHHHHHH
Confidence 1134599999999998877 7889998853 257777776543 2345566665555 33333 23336777
Q ss_pred HHHHHHHHHHhhcCCCCce-eeCC
Q 019298 311 LENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 311 ~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
..++...+.+.|+++|++. +..|
T Consensus 243 ~~~na~~la~~L~~~~~v~~V~~p 266 (369)
T cd00614 243 HSENALKVAEFLEKHPKVERVYYP 266 (369)
T ss_pred HHHHHHHHHHHHHcCCCccEEECC
Confidence 8889999999999987765 4444
No 166
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=6.6e-22 Score=181.06 Aligned_cols=226 Identities=15% Similarity=0.134 Sum_probs=167.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g 145 (343)
+.+|+. +....|++++|++. ..+++++++|+++++..++.+++++||+|+++.|+|+.....+ ...|
T Consensus 47 Y~R~~n-pt~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~g 117 (388)
T PRK08861 47 YTRSGN-PNRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGD 117 (388)
T ss_pred ccCCCC-chHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCC
Confidence 455555 45789999999998 3589999999999999999999999999999999998643322 2345
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.++..++. .|++++++++++++++|++++|+||||.+++. ++|+++|+++|+++|+|++|....+..
T Consensus 118 i~v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl---~~I~~la~~~gi~vIvDea~~~~~~~~--- 184 (388)
T PRK08861 118 FKVQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVDI---AELCQKAKAVGALVAVDNTFLTPVLQK--- 184 (388)
T ss_pred eEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCccccccCC---
Confidence 66666632 47899999998899999999999999999774 577788889999999999998644321
Q ss_pred CcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
++ .++ -.++++|++|.++.++ ...|++++.+ +++.++++..+.. ....+++....+ ..-| ..
T Consensus 185 -pl-~~G---aDivv~S~tK~l~G~~d~~gG~i~~~~-------~~~~~~~~~~~~~~G~~~~p~~a~l~-~rgl---~T 248 (388)
T PRK08861 185 -PL-ELG---ADFVIHSTTKYINGHSDVIGGVLITKT-------KEHAEELAWWGNCIGATGTPFDSYMT-LRGI---RT 248 (388)
T ss_pred -Cc-ccC---CCEEEeecceeccCCCcceeEEEEecH-------HHHHHHHHHHHhccCCCCChHHHHHH-HhcC---CC
Confidence 11 122 2399999999988754 6788887743 3566667655443 345567665555 2222 22
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+--+.++..++...+.+.|+.+|.+. |+.|
T Consensus 249 l~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP 279 (388)
T PRK08861 249 LGARMRVHEESAQQILAYLQTQSLVGTIYHP 279 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 22277778888889999999988776 5555
No 167
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=2.7e-21 Score=179.89 Aligned_cols=270 Identities=13% Similarity=0.100 Sum_probs=181.1
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CC----CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--GY----APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+++.++|+..+ |.++..+|++++++.++++.-..+ .+ ....-..+|++.+++++. .+..++++
T Consensus 44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~ 112 (406)
T PRK13393 44 PREVTVWCSND---YLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--------KEAALLFT 112 (406)
T ss_pred CccEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--------CCcEEEeC
Confidence 35678888887 456778999999999998752110 11 111124567788887772 25555555
Q ss_pred ChHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc----CCceEEEEeC
Q 019298 108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIIN 181 (343)
Q Consensus 108 g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~ 181 (343)
++++++..++..+.. +||.|++....|......++..|.++..++. .|++.+++.++ ++++++++++
T Consensus 113 SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~ 185 (406)
T PRK13393 113 SGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFES 185 (406)
T ss_pred CcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcC
Confidence 556788888887765 7888888888888777777777877666543 25666766553 2567888899
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC-CCEEEEccCccccCCCCCcEEEEEEe
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVTT 260 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~-~~~i~~~S~sK~~~~~G~r~G~i~~~ 260 (343)
++|++|.+.+ +++|.++|+++++++|+||+|+...++..........+.. ..+|+++||||.|++.| ||++++
T Consensus 186 v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~ 259 (406)
T PRK13393 186 VYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS 259 (406)
T ss_pred CCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC
Confidence 9999999966 7888888999999999999998544442221111111111 23588899999999888 998864
Q ss_pred CCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298 261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS 337 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~ 337 (343)
+++++.++.... .+...++..++++ .++|+...+....+.+++++++++.+.|+++ |+.+..+.+.+
T Consensus 260 --------~~~~~~l~~~~~~~~~t~~~~p~~~aa~-~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i 329 (406)
T PRK13393 260 --------AALCDFIRSFASGFIFTTSLPPAVAAGA-LASVRHLKASSAERERHQDRVARLRARLDKA-GIPHLPNPSHI 329 (406)
T ss_pred --------HHHHHHHHHhCcCceecCccCHHHHHHH-HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCe
Confidence 367777766532 1334566666666 4555432222234567788889999999876 77654555544
No 168
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.90 E-value=8.9e-22 Score=183.83 Aligned_cols=289 Identities=17% Similarity=0.120 Sum_probs=187.2
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++++.|||+.|... ..++ .+|.+.+++.+++... ..|+...+..++...+++.+.+.++ ...+++++++|+++
T Consensus 34 dG~~~id~~~~~~~--~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgse 107 (413)
T cd00610 34 DGNRYLDFLSGIGV--LNLGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTE 107 (413)
T ss_pred CCCEEEEcCccHHh--hccCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence 37889999987533 2344 7899999999998643 3454432344555555555555443 35789999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCC----CCCCCCHHHHHhhhcC
Q 019298 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPD----KGWEVDLDDIESLADQ 172 (343)
Q Consensus 112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~----~~~~~d~~~l~~~~~~ 172 (343)
++..+++.+. .++++|++.+++|+++.......+. ++..++.+.. ..+..|++.|++.++.
T Consensus 108 a~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 187 (413)
T cd00610 108 AVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEE 187 (413)
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhc
Confidence 9999999874 5689999999999886554443321 2344443211 1234588999988865
Q ss_pred --CceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC
Q 019298 173 --NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248 (343)
Q Consensus 173 --~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 248 (343)
+...+++++| +|++|..+ +.+.+++|.++|++||+++|+||+|.++...+... ....++...+ +.|+||.++
T Consensus 188 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-~~~~~~~~~d---~~t~sK~l~ 263 (413)
T cd00610 188 HPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF-AFEHFGVEPD---IVTLGKGLG 263 (413)
T ss_pred CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-hHhhcCCCCC---eEEEccccc
Confidence 3445556666 67779876 67789999999999999999999999864433211 1111121112 348899988
Q ss_pred CCCCcEEEEEEeCCCCCCCchHHHHHH--hhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 019298 249 VPGWRLGWFVTTDPCGMFRKPKVVERM--KKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 249 ~~G~r~G~i~~~~~~~~~~~~~~~~~l--~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~ 325 (343)
. |+|+||++++ +++++.+ .... ..+.+.+++.+.++ .++|+...+ .+..++++++.+.+.+.|+.+
T Consensus 264 ~-g~~~g~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~~a~-~a~l~~l~~-~~~~~~~~~~~~~l~~~l~~~ 332 (413)
T cd00610 264 G-GLPLGAVLGR--------EEIMDAFPAGPGLHGGTFGGNPLACAAA-LAVLEVLEE-EGLLENAAELGEYLRERLREL 332 (413)
T ss_pred C-ccccEEEEEc--------HHHHHhhccCCCCCCCCCCcCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHHHHH
Confidence 6 7999999884 3677775 2222 23456677777776 444432111 126677777777777777654
Q ss_pred C---CceeeCCCCceEeeec
Q 019298 326 P---ELINFKSTGSSLKYLD 342 (343)
Q Consensus 326 ~---g~~~~~~~~g~~~~~~ 342 (343)
. ++.......|.++|+.
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~ 352 (413)
T cd00610 333 AEKHPLVGDVRGRGLMIGIE 352 (413)
T ss_pred HhhCCcEEEeecCceEEEEE
Confidence 1 1221123346666654
No 169
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=1.7e-21 Score=178.87 Aligned_cols=219 Identities=15% Similarity=0.092 Sum_probs=161.0
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH---hcCceeEEeec
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA---FRHIEVRHFDL 153 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~g~~~~~~~~ 153 (343)
+...+|++.+|+++ ..+++++++|+++++..++.+++++||+|+++.|+|..+...++ ..|.++..+.
T Consensus 53 p~~~~lE~~lA~l~--------g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~- 123 (385)
T PRK08574 53 PTLRPLEEALAKLE--------GGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY- 123 (385)
T ss_pred ccHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-
Confidence 46789999999998 34678888999999999999999999999999999998766553 3466665542
Q ss_pred CCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 154 LPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
+|.+++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+..... .++
T Consensus 124 -------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~----~~l---- 185 (385)
T PRK08574 124 -------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY----RPL---- 185 (385)
T ss_pred -------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC----Chh----
Confidence 468899999987 8999999999999999976 567888899999999999999753211 111
Q ss_pred CCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298 233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNF 310 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~ 310 (343)
..+..+++.|+||.++.+|..+ |++++.+ .++.++++..... ....+++..+.+ ...|+ .+..+.++
T Consensus 186 ~~GaDivv~S~sK~l~g~~d~~gG~vi~~~-------~~~~~~~~~~~~~~g~~~~p~~a~l~-l~~l~---tL~~R~~~ 254 (385)
T PRK08574 186 RHGADFVVHSLTKYIAGHNDVVGGVAVAWS-------GEFLEELWEWRRRLGTIMQPFEAYLV-LRGLK---TLEVRFER 254 (385)
T ss_pred hhCCcEEEeeCceeecCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHH-HcccC---cHHHHHHH
Confidence 1233599999999998888765 6566643 3577777655442 334555544444 33333 23336666
Q ss_pred HHHHHHHHHHhhcCCCCce-eeCC
Q 019298 311 LENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 311 ~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
..++...+.+.|+.+|.+. |+.|
T Consensus 255 ~~~na~~la~~L~~~p~v~~V~yP 278 (385)
T PRK08574 255 QCRNAMAIAEFLSEHPKVAEVYYP 278 (385)
T ss_pred HHHHHHHHHHHHHcCCCcCEEECC
Confidence 6778888888998887765 4444
No 170
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.90 E-value=1.9e-21 Score=179.16 Aligned_cols=253 Identities=15% Similarity=0.162 Sum_probs=174.6
Q ss_pred CCCcHHHHHHHHHHHhcCCCC--CCC----C--CCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChHHHHHHHHHHhc
Q 019298 51 FHTTHVATEAVAEALLSEKFN--GYA----P--TAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAIDVAMALLS 121 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~--~Y~----~--~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l~ 121 (343)
.++++.+.+++.+.+.+...+ ... + .....++|+.++++++ .+ ++++++|+|+++++..++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~l~ 82 (373)
T cd06453 9 SQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFIN------APSPDEIIFTRNTTEAINLVAYGLG 82 (373)
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCCHHHHHHHHHHHhh
Confidence 346788888888877432110 000 0 1223568888888883 34 6799999999999999999998
Q ss_pred C---CCCeEEEeCCCCcch----HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 122 R---PGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 122 ~---~gd~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
. +||+|++++++|++. ...++..|.+++.++.+ .++.+|++++++.+.++++++++++|+||||...+
T Consensus 83 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~--- 157 (373)
T cd06453 83 RANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP--- 157 (373)
T ss_pred hcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---
Confidence 7 899999999999874 33455679999999875 45679999999999888999999999999999976
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
+++|.++|+++|+++++|++|+.... +..+... +..+++.|++|.++. .++|++++++ +++++
T Consensus 158 ~~~i~~~~~~~~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~~~~--~g~g~~~~~~--------~~~~~ 220 (373)
T cd06453 158 VKEIGEIAHEAGVPVLVDGAQSAGHM----PVDVQDL---GCDFLAFSGHKMLGP--TGIGVLYGKE--------ELLEE 220 (373)
T ss_pred HHHHHHHHHHcCCEEEEEhhhhcCce----eeecccc---CCCEEEeccccccCC--CCcEEEEEch--------HHhhc
Confidence 56788888899999999999875321 1111111 233777899999876 5589998853 45555
Q ss_pred Hhhhhc---------------------c-ccCcchHHHHHHHhccchhhH--HHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 275 MKKYFD---------------------I-LGDPATFIQVCIMYGCLSTIM--QIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 275 l~~~~~---------------------~-~~~~~~~~~~a~~~~~l~~~~--~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
++.... . .+.++.....++ ..++.... .+-+.+++.+++++.+.+.|++++++.+
T Consensus 221 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al-~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~ 299 (373)
T cd06453 221 MPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGL-GAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRV 299 (373)
T ss_pred CCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 443210 0 012333333333 22322111 1122667777888899999998888886
Q ss_pred eC
Q 019298 331 FK 332 (343)
Q Consensus 331 ~~ 332 (343)
..
T Consensus 300 ~~ 301 (373)
T cd06453 300 YG 301 (373)
T ss_pred eC
Confidence 43
No 171
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.90 E-value=2.6e-21 Score=178.79 Aligned_cols=262 Identities=11% Similarity=0.080 Sum_probs=181.4
Q ss_pred CCCcHHHHHHHHHHHhcCC-----CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc----
Q 019298 51 FHTTHVATEAVAEALLSEK-----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS---- 121 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~-----~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~---- 121 (343)
.++++.+++++.+.+.+.. .+.|+. .+.+.+++++++++.. .+. .++++|++|+|+++++..+++++.
T Consensus 9 ~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~-~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~ 85 (382)
T TIGR03403 9 TMLDPKVKELMDPFFCDIYGNPNSLHQFGT-ATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEI 85 (382)
T ss_pred CCCCHHHHHHHHHHHHhcCcCCccccHHHH-HHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhc
Confidence 3567889999988876421 122332 3557888888888753 221 267899999999999999998762
Q ss_pred -CC-CCeEEEeCCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHH
Q 019298 122 -RP-GANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQ 196 (343)
Q Consensus 122 -~~-gd~vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~ 196 (343)
++ +++|++..+.|+.+... ++..|.+++.+++++ ++.+|++.+++.++++++++++++|+||||..++ ++
T Consensus 86 ~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~ 160 (382)
T TIGR03403 86 LKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANNETGMIFP---IK 160 (382)
T ss_pred ccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HH
Confidence 45 47899998777665543 456799999998763 3568999999999888999999999999999977 45
Q ss_pred HHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH--HH
Q 019298 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV--ER 274 (343)
Q Consensus 197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~--~~ 274 (343)
+|.++|+++|+++++|+++.... .+..+... +-.+++.|++|.+|.+| +|++.+.+...+. +.+. ..
T Consensus 161 ~I~~la~~~g~~~ivD~a~~~g~----~~~~~~~~---~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~--p~~~g~~~ 229 (382)
T TIGR03403 161 EIGEICKERGVLFHTDAVQAIGK----IPVDVQKA---GVDFLSFSAHKFHGPKG--VGGLYIRKGVELT--PLFHGGEH 229 (382)
T ss_pred HHHHHHHHcCCEEEEechhhcCC----CccCcccc---CCCEEEEcchhhCCCCc--eEEEEECCCCCCC--CcccCCCC
Confidence 77888889999999999987421 11112111 22388899999887778 5888775433211 1111 00
Q ss_pred HhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298 275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKST 334 (343)
Q Consensus 275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~ 334 (343)
+.. ...+.++...+.++ ..++....+.++ .++++++.++++.+.|.++||+.+..+.
T Consensus 230 ~~~--~~~gt~~~~~~~al-~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~ 287 (382)
T TIGR03403 230 MGG--RRSGTLNVPYIVAM-GEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDR 287 (382)
T ss_pred CCC--cccCCcChHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCC
Confidence 111 11345666666565 444443333344 6788899999999999988888876553
No 172
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.89 E-value=2.9e-21 Score=179.41 Aligned_cols=279 Identities=18% Similarity=0.101 Sum_probs=181.3
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+++++||..|.-..+.++ .+|++.+++.+++++.. .+...... +....+++.+.... ..+.+++++++++++
T Consensus 39 G~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~--~~~~~~~~-~~~~~l~~~l~~~~----~~~~~~~~~sGseA~ 110 (403)
T PRK05093 39 GKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLW--HISNVFTN-EPALRLAKKLIDAT----FAERVFFANSGAEAN 110 (403)
T ss_pred CCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcC--cccCccCC-HHHHHHHHHHHhhC----CCCEEEEeCchHHHH
Confidence 778999988743322223 88999999999987521 11111111 22234444443311 246999999999999
Q ss_pred HHHHHHhc--------CCCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCCCCCCHHHHHhhhcC
Q 019298 114 DVAMALLS--------RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDIESLADQ 172 (343)
Q Consensus 114 ~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~~~~ 172 (343)
..+++... ...++|+..+-+|++....+...+. ++..++. -|++.+++.+.+
T Consensus 111 e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~ 183 (403)
T PRK05093 111 EAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVIDD 183 (403)
T ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcC
Confidence 99998652 1235788788777765433322211 1111111 278999998876
Q ss_pred CceEEEEeCCCCCccccc--CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCC
Q 019298 173 NTVALVIINPGNPCGNVY--SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250 (343)
Q Consensus 173 ~~~~i~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 250 (343)
++++|+++ |.||+|-++ +.+.+++|+++|++||+++|+||+|.++.+.+... +....+.... +.||||+++ +
T Consensus 184 ~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~s~sK~l~-~ 257 (403)
T PRK05093 184 HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF-AYMHYGVTPD---ILTSAKALG-G 257 (403)
T ss_pred CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCCCC---EEEeccccc-C
Confidence 66666666 888877665 88999999999999999999999999887666421 2111211112 568999988 8
Q ss_pred CCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCC---
Q 019298 251 GWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIP--- 326 (343)
Q Consensus 251 G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~--- 326 (343)
|+|+||+++++ ++++.+... ...+.+.+++.|.++ .++|+.. .-.+.+++++++++.+.+.|+++.
T Consensus 258 G~rig~vv~~~--------~i~~~l~~~~~~~t~~~~~~~~~aa-~a~L~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~ 327 (403)
T PRK05093 258 GFPIGAMLTTA--------EIASHFKVGTHGSTYGGNPLACAVA-EAVFDII-NTPEVLEGVKARRQRFVDGLQKINQKY 327 (403)
T ss_pred CcceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHH-HHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999963 677777653 333556788888887 4444321 111267888899999999888751
Q ss_pred CceeeCCCCceEeeecC
Q 019298 327 ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 327 g~~~~~~~~g~~~~~~l 343 (343)
++....+.+|+++|+.+
T Consensus 328 ~~~~~~~~~G~~~~~~l 344 (403)
T PRK05093 328 GVFSEIRGMGLLIGAEL 344 (403)
T ss_pred CCeEeEeeCceEEEEEe
Confidence 22223446688888753
No 173
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.89 E-value=1.8e-21 Score=169.68 Aligned_cols=255 Identities=20% Similarity=0.247 Sum_probs=158.6
Q ss_pred CCCCC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHH--HHHhc------------CCCCeEEEeCCC
Q 019298 69 KFNGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA--MALLS------------RPGANILLPRPG 133 (343)
Q Consensus 69 ~~~~Y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~--~~~l~------------~~gd~vl~~~p~ 133 (343)
..-+| +-..|.+++|+-.++++ ++++++|++..+++-.|..- .++++ .+.-+.++|.|+
T Consensus 60 D~RNY~G~l~Gipe~r~l~a~ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPG 133 (425)
T PF12897_consen 60 DCRNYPGGLDGIPEARELFAELL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPG 133 (425)
T ss_dssp BTTSS-S-SS--HHHHHHHHHHH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES-
T ss_pred cccCCCCccCChHHHHHHHHHHh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCC
Confidence 45689 88899999999999999 78999999987766544322 22221 112478999999
Q ss_pred CcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCC--CCCcccccCHHHHHHHHHH-HhhcCcEE
Q 019298 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINP--GNPCGNVYSYQHLQKLAET-ANKLKTLV 209 (343)
Q Consensus 134 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p--~nptG~~~~~~~l~~l~~~-~~~~~~~~ 209 (343)
|......++.+|++.+.+++.+ .++|+|.+++.+.+ ....-+.|.| +||||.++|.|.+++++++ ....|+.|
T Consensus 134 YDRHFai~E~~Giemi~VpM~~---dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI 210 (425)
T PF12897_consen 134 YDRHFAITEHFGIEMIPVPMTE---DGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRI 210 (425)
T ss_dssp -HHHHHHHHHCT-EEEEEEEET---TEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EE
T ss_pred chHHHHHHHhhCcEEEecCCCC---CCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEE
Confidence 9999999999999999999965 36899999998853 3333445667 8999999999999999998 44579999
Q ss_pred EEccCCCcccc-CCCCCCc---c----cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-
Q 019298 210 IADEVYGHLVF-GDKPFVP---M----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD- 280 (343)
Q Consensus 210 i~D~ay~~~~~-~~~~~~~---~----~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~- 280 (343)
+.|++|+...+ ++.+... + ...+..++++.+.|+||. ..+|.+|+++.++. +-++.+++...
T Consensus 211 ~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~--------~Nl~~~~~~~~~ 281 (425)
T PF12897_consen 211 FWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASE--------ANLAWIKKHLSV 281 (425)
T ss_dssp EEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-H--------HHHHHHHHHHHH
T ss_pred EeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCH--------HHHHHHHHHhcC
Confidence 99999998766 2222111 1 112345689999999999 79999999999864 34444444432
Q ss_pred cccCcchHHHHHHHhccchhhH-HH---H-HHHHHHHHHHHHHHHhhcC-CC---Cc-eeeCCCCceEeeec
Q 019298 281 ILGDPATFIQVCIMYGCLSTIM-QI---M-IHGNFLENFAGSCVPSYKL-IP---EL-INFKSTGSSLKYLD 342 (343)
Q Consensus 281 ~~~~~~~~~~~a~~~~~l~~~~-~~---l-~~~~~~~~~~~~~~~~L~~-~~---g~-~~~~~~~g~~~~~~ 342 (343)
.+-++..+.|..- ...+.+.. .+ + ++++.++-+.+.+.+.|++ +. |+ .|..|+||+|++++
T Consensus 282 ~tIgpdKvNQLRH-vrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld 352 (425)
T PF12897_consen 282 QTIGPDKVNQLRH-VRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLD 352 (425)
T ss_dssp H-S---HHHHHHH-HHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEE
T ss_pred ceeCccHHHHHHH-HHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEe
Confidence 2557788998777 55555433 22 2 2666777777777777654 43 34 48899999999986
No 174
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.89 E-value=1.8e-21 Score=177.80 Aligned_cols=257 Identities=15% Similarity=0.096 Sum_probs=176.3
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
.++||-+..-.. .....+++++.++++++.++ |. +.+++++++.+++.+.+| .+++++++|+++++.
T Consensus 8 ~~~ina~g~~t~-~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al~ 74 (363)
T TIGR01437 8 KKVINASGKMTI-LGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGIA 74 (363)
T ss_pred ceEEECCcEeec-CCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHHH
Confidence 456666544422 22344789999999998652 32 345777777777776554 458899999999999
Q ss_pred HHHHHhcCCCC---------------eEEEeCCCCcch----HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCce
Q 019298 115 VAMALLSRPGA---------------NILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175 (343)
Q Consensus 115 ~~~~~l~~~gd---------------~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 175 (343)
.++.+++++|| .|+++.|.|..| ...+...|++++.++. ++.+|+++++++++++++
T Consensus 75 ~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai~~~t~ 150 (363)
T TIGR01437 75 QSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAITEKTA 150 (363)
T ss_pred HHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhcChhce
Confidence 99999999988 999999888766 4566778999988865 245999999999998888
Q ss_pred EEE-EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 176 ALV-IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 176 ~i~-~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
+++ +++|+||+|.+.+ +++|+++|++||+++|+|++|+... ..+..+ +..+++.|++|.+ +|++.
T Consensus 151 ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~---g~D~~~~S~~K~l--~gp~~ 216 (363)
T TIGR01437 151 AILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRL---GADLVIYSGAKAI--EGPTS 216 (363)
T ss_pred EEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCch------HHHHHc---CCCEEEEeCCccc--CCCce
Confidence 766 5788999999866 4667889999999999999997211 111112 2238889999984 67789
Q ss_pred EEEEEeCCCCCCCchHHHHHHhhhhccc---cCcchHHHHHHHhccchhhHHHH-HHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 255 GWFVTTDPCGMFRKPKVVERMKKYFDIL---GDPATFIQVCIMYGCLSTIMQIM-IHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 255 G~i~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~a~~~~~l~~~~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
|+++++ +++++.++...... ..........+ .+++....+.. +..+.+.++++.+.+.|.++||+.+
T Consensus 217 G~l~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~gl-~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~ 287 (363)
T TIGR01437 217 GLVLGK--------KKYIEWVKLQSKGIGRAMKVGKENILGL-TAALEQYLSTGKESGAEMVAKLTPFIEALNTLKGVSA 287 (363)
T ss_pred EEEEEc--------HHHHHHHHhccCCCcceeccCHHHHHHH-HHHHHHHHccCcccHHHHHHHHHHHHHHHhcCCCeEE
Confidence 998874 35666654332110 01111111122 22222111111 1455556677789999999999885
Q ss_pred e
Q 019298 331 F 331 (343)
Q Consensus 331 ~ 331 (343)
.
T Consensus 288 ~ 288 (363)
T TIGR01437 288 S 288 (363)
T ss_pred E
Confidence 4
No 175
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.89 E-value=2.6e-21 Score=177.21 Aligned_cols=250 Identities=16% Similarity=0.124 Sum_probs=170.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPT-AGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANIL 128 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl 128 (343)
.+.++.+.+++.+.+. .+.|+.. .-..++++.+++++ ++++ +.+++++|+++++..++.++..+||+|+
T Consensus 8 ~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl 78 (356)
T cd06451 8 SNVPPRVLKAMNRPML---GHRSPEFLALMDEILEGLRYVF------QTENGLTFLLSGSGTGAMEAALSNLLEPGDKVL 78 (356)
T ss_pred cCCCHHHHHHhCCCcc---CCCCHHHHHHHHHHHHHHHHHh------cCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEE
Confidence 5677888888865432 1223221 11346677777777 3334 4577888889999999999999999999
Q ss_pred EeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhc
Q 019298 129 LPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKL 205 (343)
Q Consensus 129 ~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 205 (343)
++.++|.. +...++..|.+++.++.++ ++.+|++++++.+++ +++++++++|+||||..++ +++|.++|+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~ 153 (356)
T cd06451 79 VGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH 153 (356)
T ss_pred EecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc
Confidence 99988765 4567788899999998754 357899999999986 8899999999999999976 56678888899
Q ss_pred CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh---hh---
Q 019298 206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK---YF--- 279 (343)
Q Consensus 206 ~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~---~~--- 279 (343)
|+++++|++|... .. +..+... +..+++.|++|.|+.+ .++||++.++ ++++++.. ..
T Consensus 154 ~~~li~D~~~~~g---~~-~~~~~~~---~~d~~~~s~~K~l~~p-~g~G~l~~~~--------~~~~~~~~~~~~~~~~ 217 (356)
T cd06451 154 DALLIVDAVSSLG---GE-PFRMDEW---GVDVAYTGSQKALGAP-PGLGPIAFSE--------RALERIKKKTKPKGFY 217 (356)
T ss_pred CCEEEEeeehhcc---Cc-ccccccc---CccEEEecCchhccCC-CCcceeEECH--------HHHHHHHhcCCCCcee
Confidence 9999999998641 11 1122211 2236778899998765 3589998853 45555542 00
Q ss_pred --------------ccccCcchHHHHHHHhccchhhH-H-HHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298 280 --------------DILGDPATFIQVCIMYGCLSTIM-Q-IMIHGNFLENFAGSCVPSYKLIPELINFK 332 (343)
Q Consensus 280 --------------~~~~~~~~~~~~a~~~~~l~~~~-~-~l~~~~~~~~~~~~~~~~L~~~~g~~~~~ 332 (343)
.....++...+.++ .+++.... . +-+..++.+++++.+.+.|..+ |+.+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~-~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 284 (356)
T cd06451 218 FDLLLLLKYWGEGYSYPHTPPVNLLYAL-REALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLA 284 (356)
T ss_pred ecHHHHHhhhcccCCCCCCChHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeecc
Confidence 01112333333333 33332211 1 1226777888889999999887 777543
No 176
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.89 E-value=2.9e-21 Score=179.52 Aligned_cols=165 Identities=21% Similarity=0.193 Sum_probs=133.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g 145 (343)
+++|+. +...+|++.+|++++ .+..++++++++++..++.+++++||+|+++.+.|++.. ..+...|
T Consensus 51 ysr~~~-p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 121 (418)
T TIGR01326 51 YSRLMN-PTTDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLG 121 (418)
T ss_pred eECCCC-hhHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcC
Confidence 345554 346789999999982 357889999999999999999999999999999996543 3456678
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.+++.++. .|++++++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+.....
T Consensus 122 ~~v~~v~~-------~d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~~---- 187 (418)
T TIGR01326 122 IEVRFVDP-------DDPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYLC---- 187 (418)
T ss_pred cEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhcC----
Confidence 88888763 1789999999888999999999999999964 778888899999999999999753211
Q ss_pred CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
.+ + ..+..+++.|+||.++++|+|+||++++.
T Consensus 188 ~~---l-~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 188 RP---I-DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred Cc---h-hcCCeEEEECccccccCCccceEEEEEec
Confidence 11 1 12456999999999999999999999864
No 177
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=4.5e-21 Score=175.38 Aligned_cols=243 Identities=16% Similarity=0.068 Sum_probs=172.3
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL 128 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl 128 (343)
++.++.+.++...... ....|.. .+....|++++|++. ..+++++++|+++|+..++.+++++||+|+
T Consensus 35 ~~~~~~~~~~~~~~~~--~~~~Y~r~~npt~~~Le~~iA~le--------~~~~~~~~~sG~~Ai~~~l~all~~GD~Vv 104 (394)
T PRK09028 35 FDTVAEMRHAAKNRAN--GEMFYGRRGTPTHFAFQAAIVELE--------GGAGTALYPSGAAAISNALLSFLKAGDHLL 104 (394)
T ss_pred cCCHHHHHHHhccCcc--CCceecCCCCchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 4455555554432211 1124665 234569999999886 235789999999999999999999999999
Q ss_pred EeCCCCcchHHHH----HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 129 LPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 129 ~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
+++|.|.++...+ ...|.++..++.. +.+.+++.+++++++|++++|+||||.+ .++++|+++|++
T Consensus 105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-------~~e~l~~~l~~~TklV~lespsNPtg~v---~dl~~I~~la~~ 174 (394)
T PRK09028 105 MVDSCYEPTRDLCDKILKGFGIETTYYDPM-------IGEGIRELIRPNTKVLFLESPGSITMEV---QDVPTLSRIAHE 174 (394)
T ss_pred EECCCcHHHHHHHHHhhhhcceEEEEECCC-------CHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHH
Confidence 9999997776533 4467777665421 4578888888889999999999999888 889999999999
Q ss_pred cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhc-cc
Q 019298 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-IL 282 (343)
Q Consensus 205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~ 282 (343)
+|+++|+|++|+.... ..++ ..+-.+++.|.+|.++.+| ...|++ +.+ +++.++++.... ..
T Consensus 175 ~g~~lvvD~t~a~p~~----~~Pl----~~GaDivv~S~tK~l~Gh~d~~~G~~-~~~-------~~~~~~l~~~~~~~G 238 (394)
T PRK09028 175 HDIVVMLDNTWASPIN----SRPF----EMGVDISIQAATKYIVGHSDVMLGTA-TAN-------EKHWDQLREHSYLMG 238 (394)
T ss_pred cCCEEEEECCcccccc----CCcc----ccCceEEEEeCCeEecCCCCEEEEEE-ECC-------HHHHHHHHHHHHhcC
Confidence 9999999999986321 1111 1234499999999998876 555554 432 345565654432 24
Q ss_pred cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 283 GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 283 ~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
...++.....+ ..-| ..+--+.++..++...+.++|+++|.+. ++.|
T Consensus 239 ~~~~p~~a~l~-~rgl---~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yP 286 (394)
T PRK09028 239 QCTSPDDVYLA-MRGL---RTLGVRLAQHEKNALKVANWLATRPEVDHVRHP 286 (394)
T ss_pred CCCCHHHHHHH-Hccc---CcHHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 46666665555 2222 2222288888899999999999988776 5555
No 178
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.89 E-value=6.3e-21 Score=175.88 Aligned_cols=287 Identities=15% Similarity=0.105 Sum_probs=190.5
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++++++||..|.-..+.+. .+|.+.+++.+++++.. ... .....++++.+++++.+..+ .+.++++++++++
T Consensus 27 ~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a 98 (377)
T PRK02936 27 NGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIW--HVS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAEA 98 (377)
T ss_pred CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--ccc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHH
Confidence 3788999998874433333 78999999999987531 122 23457899999999976332 3689999999999
Q ss_pred HHHHHHHhc-CCC-CeEEEeCCCCcchHHHH-HhcCceeE---EeecCCCCCCC--CCHHHHHhhhcCCceEEEEeCCCC
Q 019298 113 IDVAMALLS-RPG-ANILLPRPGFPIYELSA-AFRHIEVR---HFDLLPDKGWE--VDLDDIESLADQNTVALVIINPGN 184 (343)
Q Consensus 113 l~~~~~~l~-~~g-d~vl~~~p~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~--~d~~~l~~~~~~~~~~i~~~~p~n 184 (343)
+..+++... -+| +.|++.+++|++..... ...+.... ..+..++..+. -|++.+++.+.++++++++..+++
T Consensus 99 ~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~ 178 (377)
T PRK02936 99 NEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQG 178 (377)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccC
Confidence 999998642 233 67899999887543322 22221110 11111100000 168999998887788888888889
Q ss_pred Ccccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298 185 PCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (343)
Q Consensus 185 ptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~ 263 (343)
++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+... ....+....++ .++||+++ +|+|+||++++
T Consensus 179 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~ig~v~~~--- 250 (377)
T PRK02936 179 EGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDI---VTVAKGLG-NGIPVGAMIGK--- 250 (377)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCcE---EEEccccc-CCCccEEEEEc---
Confidence 99877 578999999999999999999999999876655421 21122212222 36999988 89999999985
Q ss_pred CCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC----CCCceeeCCCCceE
Q 019298 264 GMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL----IPELINFKSTGSSL 338 (343)
Q Consensus 264 ~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~----~~g~~~~~~~~g~~ 338 (343)
+++.+.+.... ..+++.+++.++++ .++|+.. ...+.+++++++.+.+.+.|++ ++.+.... ..|++
T Consensus 251 -----~~~~~~~~~~~~~~t~~~~~~~~aaa-~a~l~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~g~~ 322 (377)
T PRK02936 251 -----KELGTAFGPGSHGSTFGGNPLAMAAA-KEVLQVI-KQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIR-GKGLM 322 (377)
T ss_pred -----HHHHhhccCCCCCCCCCCCHHHHHHH-HHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEe-ecceE
Confidence 36777775443 23456788888888 5555432 1112556667777777776665 33332222 35688
Q ss_pred eeecC
Q 019298 339 KYLDL 343 (343)
Q Consensus 339 ~~~~l 343 (343)
+|+++
T Consensus 323 ~~i~~ 327 (377)
T PRK02936 323 IGIEC 327 (377)
T ss_pred EEEEe
Confidence 88864
No 179
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.89 E-value=8e-21 Score=175.24 Aligned_cols=262 Identities=14% Similarity=0.080 Sum_probs=174.9
Q ss_pred CCCcHHHHHHHHHHHhcCC----CCCCCC----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC
Q 019298 51 FHTTHVATEAVAEALLSEK----FNGYAP----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR 122 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~----~~~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~ 122 (343)
+++++.+.+++.+.++... ...|+. ..+..++|+.++++++. -..++|++++|+++++..++.++++
T Consensus 10 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~~~v~~~~g~t~al~~~~~~~~~ 84 (376)
T TIGR01977 10 YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNA-----PSSAHVVFTNNATTALNIALKGLLK 84 (376)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCc-----CCCCeEEEeCCHHHHHHHHHHhccC
Confidence 5678899999988876431 112332 13456888999988832 1335899999999999999999989
Q ss_pred CCCeEEEeCCCCcchHH----HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHH
Q 019298 123 PGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKL 198 (343)
Q Consensus 123 ~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l 198 (343)
+||+|++..++|..+.. .++..|.+++.++.+ .++.+|+++++++++++++++++++|+||||..++. ++|
T Consensus 85 ~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~---~~i 159 (376)
T TIGR01977 85 EGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCD--NEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPI---EEI 159 (376)
T ss_pred CCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCH---HHH
Confidence 99999999999977543 445568999888775 345689999999998889999999999999999874 567
Q ss_pred HHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH--H--
Q 019298 199 AETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE--R-- 274 (343)
Q Consensus 199 ~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~--~-- 274 (343)
.++|+++|+++|+|++++.... +..+ ...+-.+++.|++|.++.+. ..|.+++++...+. +.... .
T Consensus 160 ~~l~~~~~~~livD~a~~~g~~----~~~~---~~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~--~~~~~~~~~~ 229 (376)
T TIGR01977 160 GELAQENGIFFILDAAQTAGVI----PIDM---TELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLK--PLKSGGTGSH 229 (376)
T ss_pred HHHHHHcCCEEEEEhhhccCcc----CCCc---hhcCCCEEEecccccccCCC-CceEEEEcCCcCcC--ceecCCCccc
Confidence 8888999999999999986332 1111 11223488999999976542 35766665543111 00000 0
Q ss_pred ---H---hhh--hccccCcchHHHHHHHhccchhhHHH--HHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 275 ---M---KKY--FDILGDPATFIQVCIMYGCLSTIMQI--MIHGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 275 ---l---~~~--~~~~~~~~~~~~~a~~~~~l~~~~~~--l~~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
+ +.. +...+.++.....++ ..+++...+. -..+++.++..+.+.+.|.+++|+.+..+
T Consensus 230 ~~~~~~~~~~~~r~~~~t~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~ 297 (376)
T TIGR01977 230 SALIDQPSELPDRFESGTLNTPGIAGL-NAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGP 297 (376)
T ss_pred cccccccccchhhccCCCCCHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC
Confidence 0 000 000123333333333 3333211111 11677788888899999988878886543
No 180
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.89 E-value=3e-21 Score=176.47 Aligned_cols=219 Identities=19% Similarity=0.178 Sum_probs=158.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g 145 (343)
+.+|+. .....|+++++++. . ++.++++++++++..++.+++++||+|+++.|+|..+...+ ...|
T Consensus 45 y~ry~~-p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G 114 (366)
T PRK07582 45 YGRASN-PTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLG 114 (366)
T ss_pred eECCCC-ccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence 556665 57899999999987 2 35556666678999999999999999999999998876654 3468
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.+++.++.... .+ .+.++++++++++|+||||.+ .++++|+++|+++|+++|+|++|.... +..
T Consensus 115 ~~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v---~di~~I~~~a~~~g~~lvVD~t~~~~~--~~~- 178 (366)
T PRK07582 115 VTVREAPTAGM------AE----AALAGADLVLAETPSNPGLDV---CDLAALAAAAHAAGALLVVDNTTATPL--GQR- 178 (366)
T ss_pred EEEEEECCCCh------HH----HhccCceEEEEECCCCCCCCc---cCHHHHHHHHHHcCCEEEEECCCCCcc--ccC-
Confidence 88888865321 11 223478899999999999987 468888999999999999999996421 111
Q ss_pred CcccccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
++. +. ..++++|+||.++. +|.|+||+++++ ++++++++..+.. ...++++....+ ...|..
T Consensus 179 -p~~-~g---~Divv~S~sK~l~G~~g~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~a~l~-~r~l~t--- 242 (366)
T PRK07582 179 -PLE-LG---ADLVVASDTKALTGHSDLLLGYVAGRD-------PELMAAVERWRLLAGAIPGPFEAWLA-HRSLGT--- 242 (366)
T ss_pred -chh-cC---CcEEEecccccccCCCCeeEEEEEcCc-------HHHHHHHHHHHHHhCCCCCHHHHHHH-Hhcccc---
Confidence 111 22 23889999999865 679999998753 4677777765543 345566666555 333322
Q ss_pred HHH-HHHHHHHHHHHHHHhhcCCCCce-ee
Q 019298 304 IMI-HGNFLENFAGSCVPSYKLIPELI-NF 331 (343)
Q Consensus 304 ~l~-~~~~~~~~~~~~~~~L~~~~g~~-~~ 331 (343)
++ +.++..++...+.+.|+++|.+. +.
T Consensus 243 -l~~R~~~~~~na~~la~~L~~~p~v~~v~ 271 (366)
T PRK07582 243 -LGLRFARQCANALAVAELLAGHPAVRGVR 271 (366)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 22 55777789999999999888776 44
No 181
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.88 E-value=6.2e-21 Score=173.77 Aligned_cols=235 Identities=16% Similarity=0.142 Sum_probs=168.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeE
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR 149 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~ 149 (343)
+.+|+. +...+|+++++++. ..+++++++|+++|+..++. ++++||+|+++.+.|......+.......
T Consensus 48 Y~R~~~-p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~- 116 (364)
T PRK07269 48 YTRTKN-PTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG- 116 (364)
T ss_pred eeCCCC-ccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC-
Confidence 445555 46789999999998 46799999999999999984 56899999999999976554333221110
Q ss_pred EeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc
Q 019298 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG 229 (343)
Q Consensus 150 ~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~ 229 (343)
.+.. .+..|++++++++++++++|++++|+||||.+. ++++|+++|+++|+++|+|++|....+. .++.
T Consensus 117 ~~~~----~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~----~pl~ 185 (364)
T PRK07269 117 RFHF----TYANTEEELIAAIEEDTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQ----RPIE 185 (364)
T ss_pred cEEE----EecCCHHHHHHhcCcCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC----Cchh
Confidence 0110 133589999999988999999999999999984 7888899999999999999998653221 1121
Q ss_pred ccCCCCCEEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHH
Q 019298 230 VFGSTVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIH 307 (343)
Q Consensus 230 ~~~~~~~~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~ 307 (343)
. +-.++++|++|.++.+|- -.|++++.+ +++.++++..+.. ....+++..+.+ ...|+. +-.+
T Consensus 186 -~---gaDivv~S~tK~l~g~~d~~gG~v~~~~-------~~l~~~~~~~~~~~G~~~s~~~a~l~-~~~L~t---L~~r 250 (364)
T PRK07269 186 -L---GADIVLHSATKYLSGHNDVLAGVVVTND-------LELYEKLFYNLNTTGAVLSPFDSYLL-MRGLKT---LSLR 250 (364)
T ss_pred -h---CCcEEEecCceeccCCCcccceEEEeCc-------HHHHHHHHHHHHHhCCCCCHHHHHHH-HcCCCc---HHHH
Confidence 1 233999999999987664 356666643 3577777655432 345566666555 444432 3336
Q ss_pred HHHHHHHHHHHHHhhcCCCCce-ee-CCCCceEeee
Q 019298 308 GNFLENFAGSCVPSYKLIPELI-NF-KSTGSSLKYL 341 (343)
Q Consensus 308 ~~~~~~~~~~~~~~L~~~~g~~-~~-~~~~g~~~~~ 341 (343)
.++.+++...+.++|+.+|++. +. ++.||++-|.
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~ 286 (364)
T PRK07269 251 MERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFK 286 (364)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEE
Confidence 7777888889999999988866 44 6677776553
No 182
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.88 E-value=3.9e-21 Score=179.80 Aligned_cols=270 Identities=17% Similarity=0.118 Sum_probs=180.1
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|..... .-..+|.+.+++++++.+.. .|. +..+..+|++++++++.. .++|++++|+++
T Consensus 46 dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~lae~l~~~~~~-------~~~v~~~~sGse 115 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLI-LGHAHPRVVEAVKEALERGT--SYGAPTEAEILLAKEIISRVPS-------VEMVRFVNSGTE 115 (423)
T ss_pred CCCEEEEccccccccc-cCCCCHHHHHHHHHHHHhCC--cCCCCCHHHHHHHHHHHHhCCc-------ccEEEEeCCHHH
Confidence 3888999998875521 12378999999999997653 233 445778999999998731 369999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc---CceeEEeecCCC-------CCC---CCCHHHHHhhhc---CC
Q 019298 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR---HIEVRHFDLLPD-------KGW---EVDLDDIESLAD---QN 173 (343)
Q Consensus 112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~-------~~~---~~d~~~l~~~~~---~~ 173 (343)
++..+++... ...++|+..+++|+++...+... +......+..+. +.. .-|++++++.+. ++
T Consensus 116 A~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~ 195 (423)
T TIGR00713 116 ATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEE 195 (423)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCc
Confidence 9999988643 24589999999999875433321 111111111000 000 027899998886 35
Q ss_pred ceEEEEe-CCCCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC
Q 019298 174 TVALVII-NPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (343)
Q Consensus 174 ~~~i~~~-~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G 251 (343)
+.++++. .++| +|.+.+ .+.+++|.++|++||+++|+||+|.++.++...... .+....+ +.+|||.++ +|
T Consensus 196 ~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~--~~~~~pD---i~t~sK~l~-~G 268 (423)
T TIGR00713 196 IAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQE--YFGVEPD---LTTLGKIIG-GG 268 (423)
T ss_pred EEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHH--HhCCCcc---hhhhhhhhc-CC
Confidence 5666664 6677 788877 689999999999999999999999988543221111 1121122 337999987 89
Q ss_pred CcEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhH--HHHH-HHHHHHHHHHHHHHhhcC
Q 019298 252 WRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIM--QIMI-HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~--~~l~-~~~~~~~~~~~~~~~L~~ 324 (343)
+|+||++++ +++.+.+... ...+++.++++++++ .+.|+... .+.+ .++..++.++.+.+.+++
T Consensus 269 ~pig~v~~~--------~~i~~~~~~~~~~~~~~T~~~~~~~~aaa-~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 339 (423)
T TIGR00713 269 LPVGAFGGR--------REIMERLAPEGPVYQAGTLSGNPLAMAAG-LATLKLLDEEGVYTELDELAKRLAEGLSEVLED 339 (423)
T ss_pred CceeeeeEH--------HHHHHhhCcCCCeeeccCCCCCHHHHHHH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999995 3677777532 223457788888887 55554221 1333 555555666666666666
Q ss_pred CCCce
Q 019298 325 IPELI 329 (343)
Q Consensus 325 ~~g~~ 329 (343)
+ ++.
T Consensus 340 ~-~~~ 343 (423)
T TIGR00713 340 T-GIP 343 (423)
T ss_pred c-CCC
Confidence 6 444
No 183
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.88 E-value=1.4e-20 Score=172.21 Aligned_cols=259 Identities=12% Similarity=0.078 Sum_probs=173.9
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC--cEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGANIL 128 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~al~~~~~~l~~~gd~vl 128 (343)
..+++.+++++...... ....|. .-...+|+.+++++ +++++ .|++++|+++++..++.++..++|+|+
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~------~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi 78 (355)
T TIGR03301 8 LSTSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALA------GGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLL 78 (355)
T ss_pred CCCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHh------cCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEE
Confidence 45778888888773221 111232 23456777777777 33443 677899999999999999988888877
Q ss_pred EeCCCC-cc-hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 129 LPRPGF-PI-YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 129 ~~~p~~-~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
+..+.+ +. +...++..|.+++.++.+ .++.+|++++++.+++ +.+.+++++++||||...+ +++|+++|++
T Consensus 79 ~~~~~~~~~~~~~~a~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~ 153 (355)
T TIGR03301 79 VLINGAYGERLAKICEYLGIPHTDLNFS--EYEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARS 153 (355)
T ss_pred EECCCchhhHHHHHHHHcCCceEEEecC--CCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHH
Confidence 666554 43 456778889999988764 3467899999998864 3456778889999999954 7888999999
Q ss_pred cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-----
Q 019298 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----- 278 (343)
Q Consensus 205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~----- 278 (343)
|++++|+|++++... . +..+.. .+..++++|++|.+ +.+| +||+++++ ++++.+...
T Consensus 154 ~~~~livD~~~s~g~---~-~~~~~~---~~~d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~~~~~~~~~~~~ 216 (355)
T TIGR03301 154 HGAVLIVDAMSSFGA---I-PIDIEE---LDVDALIASANKCLEGVPG--FGFVIARR--------DLLEASAGNARSLY 216 (355)
T ss_pred cCCEEEEEeccccCC---c-ccchhh---cCccEEEecCCcccccCCc--eeEEEECH--------HHHHHhhCCCCCce
Confidence 999999998776422 1 112222 23448899999986 4456 79999853 566665421
Q ss_pred -------------hccccCcchHHHHHHHhccchhhH--H-HHHHHHHHHHHHHHHHHhhcCCCCceeeCC---CCceEe
Q 019298 279 -------------FDILGDPATFIQVCIMYGCLSTIM--Q-IMIHGNFLENFAGSCVPSYKLIPELINFKS---TGSSLK 339 (343)
Q Consensus 279 -------------~~~~~~~~~~~~~a~~~~~l~~~~--~-~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~---~~g~~~ 339 (343)
....+.++...+.++ ..++.... . +-+.+++++++++++.+.|+++ |+.+..+ .+++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~ 294 (355)
T TIGR03301 217 LDLYDQWAYMEKTGKWRFTPPTHTVYAF-AQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIV 294 (355)
T ss_pred eeHHHHHHHhhhcCCCCCCCcHHHHHHH-HHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEE
Confidence 001224455555554 33333211 1 2337778899999999999887 7774333 245566
Q ss_pred eec
Q 019298 340 YLD 342 (343)
Q Consensus 340 ~~~ 342 (343)
|++
T Consensus 295 ~~~ 297 (355)
T TIGR03301 295 SFL 297 (355)
T ss_pred EEE
Confidence 654
No 184
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=2.1e-20 Score=174.57 Aligned_cols=276 Identities=15% Similarity=0.094 Sum_probs=174.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCCC-CCCCHHHHH----HHHHHHhhhCCCCCCCCcE
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-----FNGYAP-TAGLPLTRR----AIAEYLSRDLPYKLTPNDV 103 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~Y~~-~~g~~~lr~----~ia~~~~~~~~~~~~~~~i 103 (343)
.+..++|+.+. .++++.+++++...+.... ...|.. ..-...+.+ .+++++ | .+..+|
T Consensus 24 ~~~~~~l~~~~------n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~----g--~~~~~i 91 (416)
T PRK00011 24 QEEHIELIASE------NFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELF----G--AEYANV 91 (416)
T ss_pred HhcCeeeeccc------CcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCceee
Confidence 56779999887 2368899998876643211 011111 111222333 445554 3 344556
Q ss_pred EEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH-----HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEE
Q 019298 104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL 177 (343)
Q Consensus 104 ~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i 177 (343)
++++| ++++..++.+++++||+|+++.|+|..+... ....|.+++.++++. +++.+|++++++.+++ +++++
T Consensus 92 ~~~sg-t~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v 169 (416)
T PRK00011 92 QPHSG-SQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLI 169 (416)
T ss_pred ecCCc-hHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEE
Confidence 66554 7799999999999999999999999764321 123356677776643 3467999999999864 78888
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 256 (343)
+++.++++ .. .++++|+++|+++|+++|+|++|.. +.+.+..+..+. ...++++|+||++ +|.|.||
T Consensus 170 ~~~~~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-----~~di~~~S~~K~l--~g~~gg~ 237 (416)
T PRK00011 170 IAGASAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-----HADVVTTTTHKTL--RGPRGGL 237 (416)
T ss_pred EECCCcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-----CCcEEEecCCcCC--CCCCceE
Confidence 87765554 33 3578889999999999999999864 222222111221 1238899999985 7888999
Q ss_pred EEEeCCCCCCCchHHHHHHhhhhccc-c-CcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeC-
Q 019298 257 FVTTDPCGMFRKPKVVERMKKYFDIL-G-DPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFK- 332 (343)
Q Consensus 257 i~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~- 332 (343)
+++++ ++++++++...... . .+......++..+++....++++ .+++++++++.+.+.|+++ |+.+..
T Consensus 238 i~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 309 (416)
T PRK00011 238 ILTND-------EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSG 309 (416)
T ss_pred EEeCC-------HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeec
Confidence 99853 35778777664321 1 22222233321222221122333 7888999999999999987 787532
Q ss_pred CCCceEeeecC
Q 019298 333 STGSSLKYLDL 343 (343)
Q Consensus 333 ~~~g~~~~~~l 343 (343)
...++++|+++
T Consensus 310 ~~~~~~~~i~~ 320 (416)
T PRK00011 310 GTDNHLVLVDL 320 (416)
T ss_pred CCCCeEEEEeC
Confidence 23358888753
No 185
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.88 E-value=1.1e-20 Score=175.08 Aligned_cols=284 Identities=14% Similarity=0.059 Sum_probs=181.2
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++.++||..|.-.. .++ .+|.+.++++++++.... ..+.......+|.+.++++. ..+.+++++++++
T Consensus 39 G~~~lD~~~g~~~~--~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGse 108 (396)
T PRK04073 39 GNRYMDMLSAYSAV--NQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT--------GKDMVLPMNTGAE 108 (396)
T ss_pred CCEEEEcCCCHHhc--cCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC--------CCCeEEEcCChHH
Confidence 78899998776331 233 789999999999875321 11111112234555555543 2469999999999
Q ss_pred HHHHHHHHhcC---------CC-CeEEEeCCCCcchHHHH-HhcCceeEE---eecCCC--CCCCCCHHHHHhhhcCCce
Q 019298 112 AIDVAMALLSR---------PG-ANILLPRPGFPIYELSA-AFRHIEVRH---FDLLPD--KGWEVDLDDIESLADQNTV 175 (343)
Q Consensus 112 al~~~~~~l~~---------~g-d~vl~~~p~~~~~~~~~-~~~g~~~~~---~~~~~~--~~~~~d~~~l~~~~~~~~~ 175 (343)
|+..+++.... +| ++|+..+-+|++....+ ...+..... .+..+. ...-.|++.+++.++++++
T Consensus 109 A~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 188 (396)
T PRK04073 109 AVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITPNTA 188 (396)
T ss_pred HHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhcccCeE
Confidence 99999987631 33 67887777776544332 222211000 000000 0001278999998877787
Q ss_pred EEEEeCCCCCcccccCH-HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 176 ALVIINPGNPCGNVYSY-QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 176 ~i~~~~p~nptG~~~~~-~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
+++++.++||+|.+++. +.+++|.++|++||+++|+||+|.++...+... .........+ +.++||.++++|+|+
T Consensus 189 ~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~-~~~~~~~~pd---i~~~sK~lg~gg~~i 264 (396)
T PRK04073 189 AFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLF-ACDWDNVTPD---MYILGKALGGGVFPI 264 (396)
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHH-HhhhcCCCCC---EEEecccccCCCCcc
Confidence 77777779999999875 469999999999999999999999876554321 1111111122 235799999999999
Q ss_pred EEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC--CCceee
Q 019298 255 GWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI--PELINF 331 (343)
Q Consensus 255 G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~--~g~~~~ 331 (343)
||++++ +++++.+.... ..+++.+++.++++ .+.|+...+ ....++.+++++.+.+.|+++ +++...
T Consensus 265 g~~~~~--------~~i~~~~~~~~~~~t~~~~~~~~aaa-~aaL~~~~~-~~l~~~~~~~~~~l~~~L~~l~~~~i~~~ 334 (396)
T PRK04073 265 SCVAAN--------RDILGVFTPGSHGSTFGGNPLACAVS-IAALEVLEE-EKLPERSLELGEYFKEQLKEIDNPMIKEV 334 (396)
T ss_pred eEEEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHHHhhcCCcccce
Confidence 999985 36777775432 23556788888887 555542111 115567777888888888775 233332
Q ss_pred CCCCceEeeec
Q 019298 332 KSTGSSLKYLD 342 (343)
Q Consensus 332 ~~~~g~~~~~~ 342 (343)
.+. |.|++++
T Consensus 335 ~~~-g~~~~~~ 344 (396)
T PRK04073 335 RGR-GLFIGVE 344 (396)
T ss_pred ecc-eEEEEEE
Confidence 333 6667765
No 186
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.88 E-value=1.7e-20 Score=174.34 Aligned_cols=268 Identities=14% Similarity=0.093 Sum_probs=180.4
Q ss_pred eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC--CC------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY--AP------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y--~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 108 (343)
.+.|+.+.+ .+.++.+.+++...+.....+.+ .. .....++|+.+++++ +.++++|++++|
T Consensus 4 ~~yld~aa~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g 72 (402)
T TIGR02006 4 PIYLDYAAT-----TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSG 72 (402)
T ss_pred cEEeeCCcC-----CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence 367777763 35678899998887643211111 00 112455678888887 457889999999
Q ss_pred hHHHHHHHHHHhc----CCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeC
Q 019298 109 CTQAIDVAMALLS----RPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN 181 (343)
Q Consensus 109 ~~~al~~~~~~l~----~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 181 (343)
+++++..++.++. ++||+|++..++|+.+...+ +..|.+++.++++ .++.+|++++++.++++++++++++
T Consensus 73 ~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~v~~ 150 (402)
T TIGR02006 73 ATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--SNGLIDLEELKAAIRDDTILVSIMH 150 (402)
T ss_pred HHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEEEEC
Confidence 9999999887763 68999999999998765443 3458888888775 3456899999999988899999999
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
++||||... ++++|.++|+++|+++++|++++... .+..+.. .+-.+++.|.+|.+|.+| +|++++++
T Consensus 151 ~~n~tG~~~---~~~~I~~l~~~~g~~livD~a~a~g~----~~~~~~~---~~~D~~~~s~~K~~gp~G--~G~l~~~~ 218 (402)
T TIGR02006 151 VNNEIGVIQ---DIAAIGEICRERKVFFHVDAAQSVGK----IPINVNE---LKVDLMSISGHKIYGPKG--IGALYVRR 218 (402)
T ss_pred CCcCceecc---cHHHHHHHHHHcCCEEEEEcchhcCC----cccCccc---cCCCEEEEehhhhcCCCc--eEEEEEcc
Confidence 999999995 46788889999999999999997532 1112221 223488899999876556 78888765
Q ss_pred CCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceee
Q 019298 262 PCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINF 331 (343)
Q Consensus 262 ~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~ 331 (343)
+......+ +.......... .+.++.....++ ..+++...+.++ ..+++++.++.+.+.|+.++++.+.
T Consensus 219 ~~~~~~~~-~~~g~~~~~~~~~gt~~~~~~~al-~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~ 288 (402)
T TIGR02006 219 KPRVRLEA-LIHGGGHERGMRSGTLPTHQIVGM-GEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLN 288 (402)
T ss_pred CCCCCCCc-eecCCCccCCccCCCccHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 32111111 10000000111 123333333333 445443333333 7788899999999999888887653
No 187
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.88 E-value=2.7e-21 Score=176.28 Aligned_cols=250 Identities=14% Similarity=0.080 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC------------
Q 019298 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR------------ 122 (343)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~------------ 122 (343)
..+.+.+...+... ...|....+..++++++++++.+.+|.+...+++++|+|+++++..+++++..
T Consensus 13 ~~~~~~~~~~~n~~-~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~ 91 (345)
T cd06450 13 ALLLEMLTSAKNAI-DFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGR 91 (345)
T ss_pred HHHHHHHHHhcCCC-CcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccccc
Confidence 44455555554433 34588888999999999999998888664566899999999999999988742
Q ss_pred C--CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHH
Q 019298 123 P--GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 123 ~--gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~ 194 (343)
+ +++|+++.++|..+...+...|.+++.++++++ +.+|+++|++.+++ +++++++++|+||||.. ++
T Consensus 92 ~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~---~~ 166 (345)
T cd06450 92 GIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI---DP 166 (345)
T ss_pred ccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC---CC
Confidence 2 348889999999998888888999999987643 47999999999876 67788889999999998 66
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
+++|+++|+++|+++++|++|+.+.......... .....+-..+..|++|. +.++.++|++.. +
T Consensus 167 ~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~d~~~~s~~K~-l~~p~g~g~~~~-------------~- 230 (345)
T cd06450 167 LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHL-DFGIERVDSISVDPHKY-GLVPLGCSAVLV-------------R- 230 (345)
T ss_pred HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHH-hcCccccCEEEEchhHh-hCCCcchHHHHH-------------H-
Confidence 8899999999999999999999876432211110 00001123567799997 445567787643 1
Q ss_pred HhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC-CCCceEee
Q 019298 275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK-STGSSLKY 340 (343)
Q Consensus 275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~-~~~g~~~~ 340 (343)
...+.+. ...+.. ..+.+.+++..+.++++.+.|.+++++.+.. ++.++..|
T Consensus 231 ------------~~~~~~~-l~~l~~-~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f 283 (345)
T cd06450 231 ------------ALKLWAT-LRRFGR-DGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCF 283 (345)
T ss_pred ------------HHHHHHH-HHHHhH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEE
Confidence 2222222 111111 2333477888889999999999988887543 55666554
No 188
>PRK14012 cysteine desulfurase; Provisional
Probab=99.88 E-value=3.3e-20 Score=172.52 Aligned_cols=267 Identities=14% Similarity=0.094 Sum_probs=174.4
Q ss_pred eEeccCCCCCCCCCCCcHHHHHHHHHHHh--cCCCCCC--CC------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 38 ISLAMGDPTVHSCFHTTHVATEAVAEALL--SEKFNGY--AP------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y--~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+.|+.+.. .+.++.+.+++.+.+. ....+.. .. .....++|+.+++++ +.+++++++++
T Consensus 5 iyld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~~ 73 (404)
T PRK14012 5 IYLDYSAT-----TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFTS 73 (404)
T ss_pred EEecCcCC-----CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEeC
Confidence 66776663 3567888999888765 2111000 00 112456788888887 45778899999
Q ss_pred ChHHHHHHHHHHhc----CCCCeEEEeCCCCcchHHHHH---hcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEe
Q 019298 108 GCTQAIDVAMALLS----RPGANILLPRPGFPIYELSAA---FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180 (343)
Q Consensus 108 g~~~al~~~~~~l~----~~gd~vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~ 180 (343)
|+++++..++.++. ++||+|++..++|+.+...+. ..|.+++.++.+ .++.+|++++++++++++++++++
T Consensus 74 g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~--~~g~~d~~~l~~~i~~~t~lv~~~ 151 (404)
T PRK14012 74 GATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQ--SNGIIDLEKLEAAMRDDTILVSIM 151 (404)
T ss_pred CHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEEEE
Confidence 99999999887763 789999999999987655443 358898888775 345689999999999899999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260 (343)
Q Consensus 181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~ 260 (343)
+++||||.+. ++++|.++|+++|+++|+|++++... .+..+... +-.+++.|++|.++.. ++|+++++
T Consensus 152 ~~~n~tG~~~---~~~~I~~la~~~g~~vivD~a~~~g~----~~~~~~~~---~~D~~~~s~~K~~gp~--g~G~l~~~ 219 (404)
T PRK14012 152 HVNNEIGVIQ---DIAAIGEICRERGIIFHVDAAQSVGK----VPIDLSKL---KVDLMSFSAHKIYGPK--GIGALYVR 219 (404)
T ss_pred CcCCCccchh---hHHHHHHHHHHcCCEEEEEcchhcCC----cccCcccC---CCCEEEEehhhccCCC--ceEEEEEe
Confidence 9999999995 56888899999999999999997522 11122222 2237888999976533 58998887
Q ss_pred CCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhh-HHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 261 DPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTI-MQIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~-~~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
++......+.... .........+.+.....+...+++... ....+..++.++.++.+.+.|++++++.+
T Consensus 220 ~~~~~~~~~~~~g-~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~ 289 (404)
T PRK14012 220 RKPRVRLEAQMHG-GGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYL 289 (404)
T ss_pred cCCCCCCCceecC-CCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 5431110010000 000000111112222222213333221 12223667788888888888888877764
No 189
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.88 E-value=2.4e-20 Score=168.00 Aligned_cols=263 Identities=17% Similarity=0.142 Sum_probs=196.0
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC-C-----CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-K-----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+.+++||+.++ |.++..+|.+++++.++++.. . -.-++...-+.+|++.+|+|+ ..+..++.+
T Consensus 38 ~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--------g~e~al~f~ 106 (388)
T COG0156 38 GRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--------GAEAALLFS 106 (388)
T ss_pred CceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--------CCCcEEEEc
Confidence 57889999998 567889999999999998752 1 111233334578999999999 456677666
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeC
Q 019298 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIIN 181 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~ 181 (343)
++-.+...++.+|++++|.|+...-.|.+....++..+.+++.+.. .|++.|++.+++ +.+.|++..
T Consensus 107 SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivteg 179 (388)
T COG0156 107 SGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEG 179 (388)
T ss_pred ccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEec
Confidence 6788888889999999999999999999999999999999988864 378889888754 245666667
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc--cCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--FGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~--~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
.-...|.+ .++.+|++++++|+.++++||+|+..+++...-..... +...+..|+++||||+||..| ||+.+
T Consensus 180 VfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g 253 (388)
T COG0156 180 VFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAG 253 (388)
T ss_pred cccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeC
Confidence 78999999 66888899999999999999999999888544333222 233345799999999999998 99988
Q ss_pred eCCCCCCCchHHHHHHhhhh-c-ccc-CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 260 TDPCGMFRKPKVVERMKKYF-D-ILG-DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~~-~-~~~-~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
+ ..+++.++... . +++ +.||...++. ...++...+..+.+++++++...+.+.+... |+.+
T Consensus 254 ~--------~~~~d~L~~~ar~~ifStalpP~~aaa~-~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~ 317 (388)
T COG0156 254 S--------AALIDYLRNRARPFIFSTALPPAVAAAA-LAALRILEEGPERRERLQELAAFFRSLLKAL-GLVL 317 (388)
T ss_pred c--------HHHHHHHHHhCCceeccCCCCHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCcc
Confidence 5 36888887763 2 233 4455544444 4555443444448888888888888655554 4443
No 190
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.88 E-value=3.8e-20 Score=169.28 Aligned_cols=223 Identities=12% Similarity=0.124 Sum_probs=161.9
Q ss_pred CCCCCCCC---HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhc
Q 019298 72 GYAPTAGL---PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFR 144 (343)
Q Consensus 72 ~Y~~~~g~---~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~ 144 (343)
.|+. .|. ..|++.+|++. ..+++++++|+++|+..++.+++++||+|++++|.|...... ....
T Consensus 43 ~Y~r-~gnPt~~~lE~~lA~l~--------g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~ 113 (377)
T TIGR01324 43 TYGR-RGTLTHFALQDAMCELE--------GGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRM 113 (377)
T ss_pred cccC-CCCccHHHHHHHHHHHh--------CCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhc
Confidence 4663 344 68999999998 356899999999999999999999999999999999876543 3456
Q ss_pred CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCC
Q 019298 145 HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224 (343)
Q Consensus 145 g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~ 224 (343)
|.++..++.. +.+.+++++++++++|++++|+||+|.. .++++|+++|+++|+++|+|++|+......
T Consensus 114 gi~v~~~d~~-------~~e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~~~-- 181 (377)
T TIGR01324 114 GVDITYYDPL-------IGEDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLLFK-- 181 (377)
T ss_pred CcEEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccccC--
Confidence 7777666321 2378898898899999999999999888 889999999999999999999998643211
Q ss_pred CCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhH
Q 019298 225 FVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIM 302 (343)
Q Consensus 225 ~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~ 302 (343)
+. ..+..++++|++|.++.++ ...|+++++ ++.+++++..... ....++.....+ ...+ .
T Consensus 182 --pl----~~gaDivv~S~tK~l~G~~d~~gG~v~~~--------~~~~~~l~~~~~~~G~~l~p~~a~~~-~rgl---~ 243 (377)
T TIGR01324 182 --PL----EHGVDISIQAGTKYLVGHSDIMIGTVVAN--------ARTWDQLREHSYLMGQMVDADDAYTT-LRGL---R 243 (377)
T ss_pred --cc----ccCceEEEecCceeccCCCCceEEEEEeC--------HHHHHHHHHHHHHhCCCCCHHHHHHH-Hhhh---h
Confidence 11 1234599999999998764 667877663 3456656543322 334555544444 1221 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 303 QIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 303 ~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
..-.+.++..++...+.+.|+++|.+. ++.|
T Consensus 244 tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp 275 (377)
T TIGR01324 244 TLGVRLKQHQESSLAIAKWLSEQPEVARVLHP 275 (377)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcCEEECC
Confidence 222267777788788888998887765 5444
No 191
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.88 E-value=1.9e-20 Score=176.40 Aligned_cols=270 Identities=21% Similarity=0.183 Sum_probs=177.9
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHH---hhhCCCCCCCCcEEEecChH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYL---SRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~---~~~~~~~~~~~~i~~~~g~~ 110 (343)
..++|+.|.++ +..+..+.+++.... ....|.+. .-...++++++++. .+.+| ++.+++++++|++
T Consensus 69 ~~~~lg~g~~~----~~~p~~~~~~~~~~~---~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g--~~~~~v~~~~g~t 139 (447)
T PRK00451 69 YPSFLGAGAYD----HYIPAVVDHIISRSE---FYTAYTPYQPEISQGTLQAIFEYQTMICELTG--MDVANASMYDGAT 139 (447)
T ss_pred CcccCcccccC----CcCcHHHHHHHhchh---HHHhcCCCCCccchHHHHHHHHHHHHHHHHhC--CCcceEEecCcHH
Confidence 56788888854 455666666554331 12235441 11344666666433 54454 4566899999999
Q ss_pred HHHHHHHHHhc-CCCCeEEEeCCCCcchHHHHHh----cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCC
Q 019298 111 QAIDVAMALLS-RPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (343)
Q Consensus 111 ~al~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~np 185 (343)
+++..++.++. .+||+|+++++.|+.+...+.. .|.+++.+++++ + .+|++++++.++++++++++++| ||
T Consensus 140 ~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~ 215 (447)
T PRK00451 140 ALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NF 215 (447)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CC
Confidence 99999888874 7899999999999988876654 689999998754 3 78999999999888999999999 89
Q ss_pred cccccCHHHHHHHHHHHhhcCcEEEE--ccCCCccccCCCCCCcccccCCCCCEEEEc---cCccccCCCCCcEEEEEEe
Q 019298 186 CGNVYSYQHLQKLAETANKLKTLVIA--DEVYGHLVFGDKPFVPMGVFGSTVPILTLG---SLSKRWIVPGWRLGWFVTT 260 (343)
Q Consensus 186 tG~~~~~~~l~~l~~~~~~~~~~~i~--D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~---S~sK~~~~~G~r~G~i~~~ 260 (343)
||.+ +++++|+++|+++|+++++ |.+...+. .... ..+..++++ +|||.|.+.|+++||+.++
T Consensus 216 tG~v---~~l~~I~~~a~~~~~~~iv~~d~~~~g~~------~~~~---~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~ 283 (447)
T PRK00451 216 FGVI---EDLEEIAEIAHAGGALFIVGVDPVSLGLL------KPPG---EYGADIVVGEGQPLGIPLSFGGPYLGFFATR 283 (447)
T ss_pred CCee---CCHHHHHHHHHHCCCEEEEEcChHHhccC------CCcc---cCCCCEEEECCCcCCCCCCCCCCCchHHHhh
Confidence 9999 5688889999999999998 54322111 0111 122235555 7888888889999999875
Q ss_pred CCCCCCCchHHHHHH----------------------------hhhhcc-ccCcchHHHHHHHhccch-hhHHHHH-HHH
Q 019298 261 DPCGMFRKPKVVERM----------------------------KKYFDI-LGDPATFIQVCIMYGCLS-TIMQIMI-HGN 309 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l----------------------------~~~~~~-~~~~~~~~~~a~~~~~l~-~~~~~l~-~~~ 309 (343)
. ++++.+ +..... ..+.+...+.......+. ...+.++ .++
T Consensus 284 ~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~ 355 (447)
T PRK00451 284 K--------KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAE 355 (447)
T ss_pred H--------HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence 3 455542 111111 111111122111111222 1123333 889
Q ss_pred HHHHHHHHHHHhhcCCCCceeeCCCCceEee
Q 019298 310 FLENFAGSCVPSYKLIPELINFKSTGSSLKY 340 (343)
Q Consensus 310 ~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~ 340 (343)
++.++++.+.+.|++++|+.+. ++++|.+
T Consensus 356 ~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~ 384 (447)
T PRK00451 356 QNHQKAHYLAERLAEIGGVELF--DGPFFNE 384 (447)
T ss_pred HHHHHHHHHHHHHhhcCCEEec--CCCeEEE
Confidence 9999999999999998888764 4555543
No 192
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.87 E-value=4.8e-20 Score=170.18 Aligned_cols=257 Identities=14% Similarity=0.097 Sum_probs=172.2
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCC---------CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTA---------GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS 121 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~---------g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~ 121 (343)
.++++.+++++.+.+... ..++... -..++|+.+++++ +.++++|++|+|+++++..+++++.
T Consensus 9 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~t~~~t~a~~~al~~~~ 80 (379)
T TIGR03402 9 TRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVEEAREQVAKLL------GAEPDEIIFTSGGTESDNTAIKSAL 80 (379)
T ss_pred CCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHHHHHHHHHHHH
Confidence 356788999998887532 1222211 1235667777776 4568899999999999999988764
Q ss_pred ---CCCCeEEEeCCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHH
Q 019298 122 ---RPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195 (343)
Q Consensus 122 ---~~gd~vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l 195 (343)
.+|++|++...+|+.+... +...|.+++.++.+. ++.+|++++++.++++++++++++++||||..++.
T Consensus 81 ~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~--- 155 (379)
T TIGR03402 81 AAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNETGTIFPI--- 155 (379)
T ss_pred HhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccH---
Confidence 4568999999888766443 334689998887753 45689999999998889999999999999999775
Q ss_pred HHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH-
Q 019298 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER- 274 (343)
Q Consensus 196 ~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~- 274 (343)
++|.++|+++|+++++|++++. +..+..+... +-.+++.|.+|.++..| +|++.++..... .|.+...
T Consensus 156 ~~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~---~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~--~p~~~g~~ 224 (379)
T TIGR03402 156 EEIGEIAKERGALFHTDAVQAV----GKIPIDLKEM---NIDMLSLSGHKLHGPKG--VGALYIRKGTRF--RPLLRGGH 224 (379)
T ss_pred HHHHHHHHHcCCEEEEECcccc----cccccCcccC---CCCEEEEcHHHcCCCCc--eEEEEECCCCCC--CCcccCCc
Confidence 5788889999999999999975 2222222222 22378889999776667 777776543211 1111100
Q ss_pred HhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCC
Q 019298 275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKS 333 (343)
Q Consensus 275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~ 333 (343)
...... .+.++.....++ .++++...++++ ..+++++.++.+.+.|.+ ++++.+..+
T Consensus 225 ~~~~~~-~gt~~~~~~~~l-~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~ 283 (379)
T TIGR03402 225 QERGRR-AGTENVPGIVGL-GKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGD 283 (379)
T ss_pred cCCCcC-CCCccHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCC
Confidence 000111 233344333333 444443334444 667888889999999885 788876543
No 193
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.87 E-value=1.5e-20 Score=173.49 Aligned_cols=255 Identities=14% Similarity=0.103 Sum_probs=170.7
Q ss_pred EeccCCCCCCCCCCCcHHHHHHHHHHHhc-------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 39 SLAMGDPTVHSCFHTTHVATEAVAEALLS-------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 39 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
||+..+ |.++..+|+++++..+++++ ... .|+...++.+|++++|++++. .+.+++++|.++
T Consensus 2 ~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~-~yg~~~~~~~LE~~lA~~~g~-------e~al~~~sG~~a 70 (392)
T PLN03227 2 NFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRG-FYGTIDAHLELEQCMAEFLGT-------ESAILYSDGAST 70 (392)
T ss_pred CCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCccccc-ccCChHHHHHHHHHHHHHhCC-------CcEEEecCcHHH
Confidence 555555 45677899999999999875 222 377666789999999999942 356666666555
Q ss_pred HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-----------CCceEEEEe
Q 019298 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-----------QNTVALVII 180 (343)
Q Consensus 112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~i~~~ 180 (343)
.. .++.+++++||.|+++++.|.++...+...+.+++.++.... -+++.+.+.++ .++++|++.
T Consensus 71 ~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E 145 (392)
T PLN03227 71 TS-STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVVE 145 (392)
T ss_pred HH-HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEEc
Confidence 55 677778999999999999999988877777777776654210 12344333332 246778888
Q ss_pred CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc--cC-CCCCEEEEccCccccCCCCCcEEEE
Q 019298 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--FG-STVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~--~~-~~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
.+.||+|.+.+ ++++.++|++||+++|+||+|+....+......... .. ..+..|++.|+||.++.. .|++
T Consensus 146 ~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---gg~v 219 (392)
T PLN03227 146 GLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---GGMT 219 (392)
T ss_pred CCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---CcEE
Confidence 88999999977 678889999999999999999833333211111111 11 123469999999997644 4888
Q ss_pred EEeCCCCCCCchHHHHHHhhhh-c-c-ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298 258 VTTDPCGMFRKPKVVERMKKYF-D-I-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~-~-~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~ 324 (343)
+++ +++++.++... . . ..+.+++.+.++ ..++....+..+.+++++++.+++.+.|++
T Consensus 220 ~~~--------~~~~~~~~~~~~~~~~~~~~~p~~~~aa-~~al~~~~~~~~~~~~l~~~~~~l~~~L~~ 280 (392)
T PLN03227 220 VGS--------EEVVDHQRLSGSGYCFSASAPPFLAKAD-ATATAGELAGPQLLNRLHDSIANLYSTLTN 280 (392)
T ss_pred ecC--------HHHHHHHHHhCcCccccCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Confidence 764 35666665432 1 1 223346555555 333322122223778888899999988875
No 194
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=2.4e-20 Score=173.22 Aligned_cols=226 Identities=15% Similarity=0.098 Sum_probs=161.4
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~ 153 (343)
....|++.++++. ..+..++++|+++++..++..++++||+|+++.+.|+... ..+...|.+++.++.
T Consensus 65 ~~~~Le~~lA~le--------g~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 65 TTDVFEKRIAALE--------GGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred hHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 4578889999988 3468889999999999999999999999999999996533 345668888888864
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
.|++++++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|... ....++ .
T Consensus 137 -------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~----~~~~pl----~ 198 (431)
T PRK08248 137 -------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASP----YLLRPI----E 198 (431)
T ss_pred -------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcc----ccCChh----H
Confidence 3789999999888999999999999999976 568888899999999999998631 111111 2
Q ss_pred CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc-------------------------hH-HHHHHhhhh-ccccCcc
Q 019298 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK-------------------------PK-VVERMKKYF-DILGDPA 286 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~-------------------------~~-~~~~l~~~~-~~~~~~~ 286 (343)
.+..+++.|++|.++++|.++|++++.+....+.. +. +.+...... ......+
T Consensus 199 ~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~ 278 (431)
T PRK08248 199 HGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALS 278 (431)
T ss_pred cCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCC
Confidence 24459999999999999999999888544321100 00 011111111 1223445
Q ss_pred hHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 287 TFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 287 ~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+...+.+ ..-| ..+-.+.++..++...+.+.|+.+|++. ++.|
T Consensus 279 p~~a~l~-~rgl---~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yP 322 (431)
T PRK08248 279 PFNSFLL-LQGL---ETLHLRMERHSENALAVAKFLEEHEAVEWVSYP 322 (431)
T ss_pred HHHHHHH-hcCc---CcHHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence 5544444 2222 2222277788888889999999988876 5554
No 195
>PRK05939 hypothetical protein; Provisional
Probab=99.87 E-value=3.8e-20 Score=170.44 Aligned_cols=231 Identities=16% Similarity=0.072 Sum_probs=162.0
Q ss_pred CCCCCCCCH---HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH---HHHhcC
Q 019298 72 GYAPTAGLP---LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRH 145 (343)
Q Consensus 72 ~Y~~~~g~~---~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~g 145 (343)
.|.. .|.+ .|++.++++.+ .+..+++++++.++..++.+++++||+|+++++.|+.... .+...|
T Consensus 40 ~Y~r-~g~p~~~~lE~~la~leg--------~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G 110 (397)
T PRK05939 40 TYAR-QGTPTTAALEAKITKMEG--------GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLG 110 (397)
T ss_pred CcCC-CCCHHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcC
Confidence 3544 3555 89999999873 3445566666999999999999999999999999976433 455678
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.+++.++. .|++++++++++++++|++++|+||||.+ .++++|+++|+++|+++|+|++|+... .
T Consensus 111 ~~v~~v~~-------~d~e~l~~~l~~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~----~- 175 (397)
T PRK05939 111 VEVTMVDA-------TDVQNVAAAIRPNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPW----L- 175 (397)
T ss_pred CEEEEECC-------CCHHHHHHhCCCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccccc----c-
Confidence 88888764 37899999999899999999999999999 789999999999999999999986421 0
Q ss_pred CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCC-----Cc---------hHHHHHHhhh--hccccCcchHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF-----RK---------PKVVERMKKY--FDILGDPATFI 289 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~-----~~---------~~~~~~l~~~--~~~~~~~~~~~ 289 (343)
+. ....+..+++.|+||.++.+|.++|++++++....+ .. +..+.+++.. .......++..
T Consensus 176 --~~-~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~ 252 (397)
T PRK05939 176 --FR-PKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEA 252 (397)
T ss_pred --cC-ccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHH
Confidence 11 111235699999999999999999998875322100 00 0011222221 12233445554
Q ss_pred HHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 290 QVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 290 ~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
...+ ..-| ..+..+.++..++...+.+.|+..|.+. +..|
T Consensus 253 a~l~-~rgl---~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP 293 (397)
T PRK05939 253 AHRI-AIGA---ETLALRVDRSCSNALALAQFLEAHPKVARVYYP 293 (397)
T ss_pred HHHH-HcCc---CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 4444 1111 2233366777778999999999888765 5444
No 196
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.87 E-value=4.5e-20 Score=171.13 Aligned_cols=255 Identities=15% Similarity=0.067 Sum_probs=176.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~ 130 (343)
...++.+++++.... . .|. ..+..++++.+.+.+.+.+|.. ..+.+++++|+++++..++..++++||+|++.
T Consensus 18 ~~~~~~V~~a~~~~~----~-~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~ 90 (401)
T PLN02409 18 VNIPERVLRAMNRPN----E-DHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSF 90 (401)
T ss_pred CCCCHHHHHHhcCCC----C-CCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEe
Confidence 446778877765532 1 222 2355778888888877766653 23467888899999999999999999999999
Q ss_pred CCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 131 RPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 131 ~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
++.|... ...++..|.+++.++.+.+ ..+|++++++.+++ +++++++++++||||.+++.+++.++++ |++
T Consensus 91 ~~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~ 167 (401)
T PLN02409 91 RIGQFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQ 167 (401)
T ss_pred CCCchhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhc
Confidence 9988655 4567778999999987542 34799999999875 6899999999999999998777777766 999
Q ss_pred cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc----
Q 019298 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD---- 280 (343)
Q Consensus 205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~---- 280 (343)
+|+++|+|++++.. ..+..+ ...+..+++.|.+|.++++. ++||++++. +.+++++....
T Consensus 168 ~g~~~vvD~v~s~g----~~~id~---~~~~~D~~~~s~~K~l~~P~-G~G~l~~~~--------~~~~~~~~~~~~~~~ 231 (401)
T PLN02409 168 HPALLLVDGVSSIG----ALDFRM---DEWGVDVALTGSQKALSLPT-GLGIVCASP--------KALEASKTAKSPRVF 231 (401)
T ss_pred cCcEEEEEcccccC----Cccccc---cccCccEEEEcCccccCcCC-CcceeEECH--------HHHHHHhcCCCCCee
Confidence 99999999998741 111112 22223377778899986643 699999853 45565543210
Q ss_pred --------------c-ccCcchHHHHHHHhccchhhHH-HHH-HHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 281 --------------I-LGDPATFIQVCIMYGCLSTIMQ-IMI-HGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 281 --------------~-~~~~~~~~~~a~~~~~l~~~~~-~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
. .+.++.....++ ..+++...+ -++ .+++++++++.+.+.|+.+ |+++..+
T Consensus 232 ~~~~~~~~~~~~g~~~~~Tp~~~~~~al-~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~ 299 (401)
T PLN02409 232 FDWADYLKFYKLGTYWPYTPSIQLLYGL-RAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTK 299 (401)
T ss_pred cCHHHHHHHHhcCCCCCCCccHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccC
Confidence 0 112333334444 444432111 122 7788889999999999887 7775443
No 197
>PRK05968 hypothetical protein; Provisional
Probab=99.87 E-value=1.1e-19 Score=167.40 Aligned_cols=217 Identities=16% Similarity=0.089 Sum_probs=158.3
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~ 153 (343)
...+|++.++++++ .+..+++++++.++..++.+++++||+|+++.++|.... ..+...|.++..++.
T Consensus 64 ~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 64 TVRAFEEMLAKLEG--------AEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 35789999999983 234455666778999999889999999999999998633 455667888888753
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
.|++++++++ +++++|++++|+||++.. .++++|+++|+++|+++|+|++|+...+.. ++. .
T Consensus 136 -------~d~~~l~~~i-~~tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~----p~~-~-- 197 (389)
T PRK05968 136 -------RDEEAVAKAL-PGAKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQR----PIT-L-- 197 (389)
T ss_pred -------CCHHHHHHhc-ccCCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccC----chh-c--
Confidence 2788998887 568899999877777665 899999999999999999999998754322 111 1
Q ss_pred CCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298 234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMIHGNF 310 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~ 310 (343)
+..+++.|+||.++.+| .+.|+++++ ++++++++.... .....+++....+ ...|+ .+..+.++
T Consensus 198 -g~Divv~S~tK~l~g~~~~~gG~i~~~--------~~~~~~l~~~~~~~~g~~~~~~~A~~~-l~~L~---tl~~r~~~ 264 (389)
T PRK05968 198 -GVDLVIHSASKYLGGHSDTVAGVVAGS--------KEHIARINAEAYPYLGAKLSPFEAWLL-LRGLR---TLPLRMKA 264 (389)
T ss_pred -CCcEEEeeccccccCCCCeEEEEEEEC--------HHHHHHHHHHHHHhCCCCCChHHHHHH-HcccC---cHHHHHHH
Confidence 22388999999998866 578888763 357777765432 2335566655555 44443 33446666
Q ss_pred HHHHHHHHHHhhcCCCCce-eeCC
Q 019298 311 LENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 311 ~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
..++...+.+.|+.+|++. +..|
T Consensus 265 ~~~~a~~la~~L~~~p~v~~v~~p 288 (389)
T PRK05968 265 HEASALEIARRLKAHPVVERVCHP 288 (389)
T ss_pred HHHHHHHHHHHHHhCCCccEEECC
Confidence 6777888889999998886 5444
No 198
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=1.5e-20 Score=173.38 Aligned_cols=227 Identities=16% Similarity=0.058 Sum_probs=158.5
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~ 153 (343)
....|++.++++.+ .+..+.+++++.||..++.+++++||+|+++.++|.+.... +...|.++..++.
T Consensus 62 tv~~lE~~la~leg--------~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 62 TLAAFEQKLAELEG--------GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 46789999999983 35688899999999999999999999999999999866665 6778999888843
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
.+|++++++++++++++|++.+|+||++.+.+ +++|+++|+++|+++|+|++|+.- .+...-.
T Consensus 134 ------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP--------~~~~pl~ 196 (432)
T PRK06702 134 ------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATP--------YLCQAFE 196 (432)
T ss_pred ------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCch--------hhCChhh
Confidence 36889999999999999999999999999955 888899999999999999998531 1111111
Q ss_pred CCCEEEEccCccccCCCCCcEEEEEE----------eCCCCCCCc--------------hHHHHHH--hhhhccccCcch
Q 019298 234 TVPILTLGSLSKRWIVPGWRLGWFVT----------TDPCGMFRK--------------PKVVERM--KKYFDILGDPAT 287 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~r~G~i~~----------~~~~~~~~~--------------~~~~~~l--~~~~~~~~~~~~ 287 (343)
.+-.|+++|+||..+..+.-+|-+++ ++......+ +++..+. ........+.++
T Consensus 197 ~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp 276 (432)
T PRK06702 197 HGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSP 276 (432)
T ss_pred cCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCH
Confidence 12349999999955554444443333 211111000 1111111 122333446777
Q ss_pred HHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 288 FIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 288 ~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+....+ ...|+. +-.+.++..++...+.++|+.+|.+. +..|
T Consensus 277 ~~a~l~-~rgL~T---l~lR~~r~~~Na~~la~~L~~~p~V~~V~yP 319 (432)
T PRK06702 277 FNAYIS-NIGLET---LHLRMERHSENALAVAKWLADHERIEWVNYP 319 (432)
T ss_pred HHHHHH-HhccCc---HHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence 766666 444432 22255666789999999999888766 4444
No 199
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.86 E-value=1.1e-19 Score=167.25 Aligned_cols=191 Identities=16% Similarity=0.157 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCC
Q 019298 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG 133 (343)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~ 133 (343)
+.-.+++.+.+..+.. .++ ....+|+++++++++ .++++.++|+++++..++.++ +++||+|+++.++
T Consensus 14 ~~e~~~~~~~l~~~~~-~~g--~~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~ 82 (379)
T PRK11658 14 DEELAAVKEVLRSGWI-TTG--PKNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLT 82 (379)
T ss_pred HHHHHHHHHHHHcCCc-cCC--HhHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCc
Confidence 5557777777765433 233 357899999999993 357888999999999999999 7999999999999
Q ss_pred CcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEcc
Q 019298 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (343)
Q Consensus 134 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ 213 (343)
|..+...+...|++++.+++++ +++.+|++++++++++++++|+ |+|++|... ++++|.++|+++|+++|+|+
T Consensus 83 ~~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~---d~~~i~~~a~~~gi~vi~D~ 155 (379)
T PRK11658 83 WVSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAPA---DLDAIRAIGERYGIPVIEDA 155 (379)
T ss_pred HHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCcC---CHHHHHHHHHHcCCeEEEEC
Confidence 9999888899999999998865 4567999999999988888876 666799984 56788889999999999999
Q ss_pred CCCcc-ccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298 214 VYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278 (343)
Q Consensus 214 ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~ 278 (343)
+|+.. .+.+.. + ...+ +.+.||++...+++.+.|++++.+ +++.++++..
T Consensus 156 a~a~g~~~~~~~---~---g~~g--~~~~Sf~~~K~l~~g~GG~v~~~~-------~~~~~~~~~~ 206 (379)
T PRK11658 156 AHAVGTYYKGRH---I---GARG--TAIFSFHAIKNITCAEGGLVVTDD-------DELADRLRSL 206 (379)
T ss_pred CCccCCeECCee---c---CCCC--CEEEeCCCCCcCcccCceEEEECC-------HHHHHHHHHH
Confidence 99853 333321 1 1212 245677766566777788888754 4577766654
No 200
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=5.2e-20 Score=168.75 Aligned_cols=225 Identities=17% Similarity=0.131 Sum_probs=158.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g 145 (343)
+.+|+. +....|++.++++.+ .+..+++++++.++..++ .++++||+|+++.|+|+.... .+...|
T Consensus 44 y~r~~~-p~~~~Le~~lA~l~g--------~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G 113 (377)
T PRK07671 44 YSRTGN-PTRAALEELIAVLEG--------GHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFG 113 (377)
T ss_pred cCCCCC-hHHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCC
Confidence 334443 346789999999983 233445555577887765 577899999999999984433 334468
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.+++.++. .|++++++++++++++|++++|+||||.+ .++++|+++|+++|+++|+|++|....+. .
T Consensus 114 ~~v~~v~~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~---~dl~~I~~la~~~g~~lvvD~a~~~~~~~-~-- 180 (377)
T PRK07671 114 IEHTFVDT-------SNLEEVEEAIRPNTKAIYVETPTNPLLKI---TDIKKISTIAKEKGLLTIVDNTFMTPYWQ-S-- 180 (377)
T ss_pred eEEEEECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCEEEEECCCCccccC-C--
Confidence 88887753 37899999998899999999999999998 56788888899999999999999754332 1
Q ss_pred CcccccCCCCCEEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
++ .+ +..+++.|+||.++.++- -.|++++.+ ++++++++..+.. ....++.....+ ..-++ .
T Consensus 181 -p~-~~---g~Divv~S~sK~l~G~~~~~~G~~v~~~-------~~l~~~~~~~~~~~g~~~~~~~a~l~-~~~l~---t 244 (377)
T PRK07671 181 -PI-SL---GADIVLHSATKYLGGHSDVVAGLVVVNS-------PELAEDLHFVQNSTGGILGPQDSWLL-LRGLK---T 244 (377)
T ss_pred -hh-hh---CCeEEEecCcccccCCccceeEEEEeCc-------HHHHHHHHHHHHhhcCCCCHHHHHHH-HcCcC---h
Confidence 11 11 234999999999987653 456666643 3577777766543 234555544444 22222 2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+-.+.++..++...+.+.|++.|++. ++.|
T Consensus 245 l~~R~~~~~~na~~la~~L~~~~~v~~v~~p 275 (377)
T PRK07671 245 LGIRMEEHETNSRAIAEFLNNHPAVNKVYYP 275 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence 22277788899999999999888776 5454
No 201
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=2.4e-19 Score=164.48 Aligned_cols=268 Identities=17% Similarity=0.209 Sum_probs=192.1
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CC--CCCCCC----CCCHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KF--NGYAPT----AGLPLTRRAIAEYLSRDLPYKLT-PNDVF 104 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~Y~~~----~g~~~lr~~ia~~~~~~~~~~~~-~~~i~ 104 (343)
+.+++.|..+.. ...|..+.+++.+.+... .. ..|... .-.++.|+.+++|+ +.+ .++|+
T Consensus 20 ~~~~vylD~aa~-----~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~------~a~~~~eIv 88 (405)
T COG0520 20 GKPLVYLDNAAT-----SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL------NADSSDEIV 88 (405)
T ss_pred CCCeEEecCccc-----ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHh------CCCCCCeEE
Confidence 456788888762 236888999998877431 11 122221 13467889999998 456 48999
Q ss_pred EecChHHHHHHHHHHh---cCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298 105 VTSGCTQAIDVAMALL---SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (343)
Q Consensus 105 ~~~g~~~al~~~~~~l---~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 177 (343)
+|+|+|++|+.+..++ .++||+|++..-.|++ +...++..|++++.++++ +++.++.+.++..++++++++
T Consensus 89 ft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~~~Tklv 166 (405)
T COG0520 89 FTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLITPKTKLV 166 (405)
T ss_pred EeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcCCCceEE
Confidence 9999999999999999 5899999999999865 444556669999999987 455799999999999999999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCC-CCcEEE
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-GWRLGW 256 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~ 256 (343)
.++..+|.||++ .++++|+++|+++|+++++|.+++. +..+..+..+ +-.+++.|.+|.+..| | +|.
T Consensus 167 ais~vSn~tG~~---~pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l---~~Df~afsgHKwl~gP~G--iGv 234 (405)
T COG0520 167 ALSHVSNVTGTV---NPVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQEL---GCDFLAFSGHKWLLGPTG--IGV 234 (405)
T ss_pred EEECcccccccc---chHHHHHHHHHHcCCEEEEECcccc----CccCCCchhc---CCCEEEEcccccccCCCc--eEE
Confidence 999999999999 6689999999999999999999986 2233333333 3449999999954444 6 788
Q ss_pred EEEeCCCCCCCchHHHHHHhhh----------------------hccccCcchHHHHHHHhccchhhHHHH--HHHHHHH
Q 019298 257 FVTTDPCGMFRKPKVVERMKKY----------------------FDILGDPATFIQVCIMYGCLSTIMQIM--IHGNFLE 312 (343)
Q Consensus 257 i~~~~~~~~~~~~~~~~~l~~~----------------------~~~~~~~~~~~~~a~~~~~l~~~~~~l--~~~~~~~ 312 (343)
+.++. ++.+.+.-. ...-.+.+.+.+.....++++-..++. +..++.+
T Consensus 235 Ly~r~--------~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 235 LYVRK--------ELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHER 306 (405)
T ss_pred EEEch--------HHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHH
Confidence 88854 455555111 111112222333322234433222222 1777888
Q ss_pred HHHHHHHHhhcCCCCceeeCCC
Q 019298 313 NFAGSCVPSYKLIPELINFKST 334 (343)
Q Consensus 313 ~~~~~~~~~L~~~~g~~~~~~~ 334 (343)
+..+++.+.|.++|++.++.|.
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~ 328 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPP 328 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCC
Confidence 8899999999999999966653
No 202
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.86 E-value=1.4e-19 Score=165.77 Aligned_cols=194 Identities=25% Similarity=0.347 Sum_probs=144.4
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCC
Q 019298 54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRP 132 (343)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p 132 (343)
.++..+++.+++..+...+ ...+++++.+++.+.. +.+++++|+|+++++..++.++ +++||+|+++.+
T Consensus 10 ~~~e~~a~~~~~~~~~~~~------~g~~~~~~e~~la~~~----g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~ 79 (376)
T TIGR02379 10 TGQELEYIAEAISEGKLSG------DGPFSRRCETWLENRT----GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSY 79 (376)
T ss_pred CHHHHHHHHHHHHcCCccC------CcHHHHHHHHHHHHHh----CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCC
Confidence 4556788888877543321 1234555555554432 4578999999999999999887 789999999999
Q ss_pred CCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 133 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
+|..+...+...|++++.+++++ +++.+|++++++++++++++|+ |+||+|...+ +++|.++|++||+++|+|
T Consensus 80 t~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeD 152 (376)
T TIGR02379 80 TFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIED 152 (376)
T ss_pred CcHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEE
Confidence 99999888899999999999875 4578999999999988888876 6778999854 668888899999999999
Q ss_pred cCCCccc-cCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298 213 EVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF 279 (343)
Q Consensus 213 ~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~ 279 (343)
++|+.+. +.+..... +.. +.+.||+ |.+ .+|.+.|++++++ +++.++++..+
T Consensus 153 aa~~~g~~~~~~~~g~---~~~----~~~fSf~~~K~l-~~g~~gG~v~~~~-------~~~~~~~~~~~ 207 (376)
T TIGR02379 153 AAQGVMSTYKGRALGS---IGH----LGTFSFHETKNY-TSGGEGGALLIND-------QAFIERAEIIR 207 (376)
T ss_pred CccccCCccCCcccCC---CCC----EEEEeCCCCCcC-cccCCceEEEECC-------HHHHHHHHHHH
Confidence 9998764 44433222 111 4444543 664 4577889998864 46777777664
No 203
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.86 E-value=2.4e-19 Score=165.10 Aligned_cols=266 Identities=17% Similarity=0.097 Sum_probs=176.0
Q ss_pred CCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC----CC
Q 019298 51 FHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----PG 124 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~g 124 (343)
.++.|.+.+++.+++.... ...| .+..++.+.+.+.+.+.+| .+.+++++++|+++++..+++.+.. ++
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~ 104 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLGDPGLF---PGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEK 104 (371)
T ss_pred cCchHHHHHHHHHHHhcCCCCcccC---ccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCC
Confidence 3467888898888876431 1112 2334433444444443333 4556788999999999998877643 57
Q ss_pred CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 125 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
++|++.++.|..+...++..|.+++.++.+ .++.+|+++|+++++++++.++++.++|+||...+ +++|.++|++
T Consensus 105 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~ 179 (371)
T PRK13520 105 PNIVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALE 179 (371)
T ss_pred ceEEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHH
Confidence 899999999999988888899999988764 34568999999999888878888888999999955 7788888999
Q ss_pred cCcEEEEccCCCccccCC-CCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc--
Q 019298 205 LKTLVIADEVYGHLVFGD-KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-- 281 (343)
Q Consensus 205 ~~~~~i~D~ay~~~~~~~-~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-- 281 (343)
+|+++++|++|+.+...- .....+ .....+-..+..|.+|. +.+|.++|+++..+ +++++.+......
T Consensus 180 ~g~~livD~a~~~~~~~~~~~~~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~-------~~~~~~l~~~~~~~~ 250 (371)
T PRK13520 180 NGIFLHVDAAFGGFVIPFLDDPPNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRD-------ESYLDALAVDTPYLT 250 (371)
T ss_pred cCCCEEEEecchhHHHHhhcCCCCc-cccCCCCceEEECCccc-cCccCCceEEEEcC-------HHHHHhhcccCcccc
Confidence 999999999998764321 110011 11111122455678885 77788999888754 3455555422111
Q ss_pred -------ccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCCCCce
Q 019298 282 -------LGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYKLIPELI-NFKSTGSS 337 (343)
Q Consensus 282 -------~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~ 337 (343)
.+..+.....++ .++|... ..+.+.+++..++++++.+.|+++ |+. +..+..++
T Consensus 251 ~~~~~~~~gt~~~~~~~~~-~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 314 (371)
T PRK13520 251 SKKQATLTGTRSGAGVAAT-YAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLNI 314 (371)
T ss_pred CCCCcceEeeccChHHHHH-HHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceE
Confidence 011122333333 3334321 223347888889999999999888 887 55555443
No 204
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=2e-20 Score=166.41 Aligned_cols=167 Identities=17% Similarity=0.175 Sum_probs=130.2
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 156 (343)
.-..++++.+|++++ . .+.+++++|++.++..++.+++++||+|++++++|.+....+...|.+++.++...+
T Consensus 59 g~i~~~~~~~A~~~g------a-~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 59 GPIKEAQELAARAFG------A-KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERN 131 (294)
T ss_pred hHHHHHHHHHHHHhC------C-CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccC
Confidence 346788899999983 1 234456999999999999999999999999999999988888999999888876544
Q ss_pred CC----CCCCHHHHHhhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCccc
Q 019298 157 KG----WEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMG 229 (343)
Q Consensus 157 ~~----~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~ 229 (343)
.+ ..+|++++++++++ +++++++++| |++|.+++ +++|+++|+++|+++|+|++|+. +.+.+..+..
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~-- 205 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSS-- 205 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcc--
Confidence 33 36899999999863 6788999998 79999965 78889999999999999999985 3333321111
Q ss_pred ccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 230 ~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
....+..+++.|++|+ ++|++.|+++.
T Consensus 206 -~~~~~~div~~S~hK~--l~g~~~~~~l~ 232 (294)
T cd00615 206 -AAMAGADIVVQSTHKT--LPALTQGSMIH 232 (294)
T ss_pred -hhhcCCcEEEEchhcc--cchHhHHHHHH
Confidence 1223567999999998 47777766543
No 205
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.86 E-value=8e-20 Score=167.10 Aligned_cols=254 Identities=16% Similarity=0.115 Sum_probs=171.1
Q ss_pred CCCcHHHHHHHHHHHhcCCC--CCCCCC------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC
Q 019298 51 FHTTHVATEAVAEALLSEKF--NGYAPT------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR 122 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~--~~Y~~~------~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~ 122 (343)
.++++.+++++.+.+..... ...... .-..++|+.+++++ +.++++|++++|+++++..++..+..
T Consensus 8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLAR 81 (353)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 35788999999888753211 110100 11356788888887 45788999999999999999888753
Q ss_pred ----CC-CeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 123 ----PG-ANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 123 ----~g-d~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
+| +.|++....|+.+.. .++..|.+++.++.+ .++.+|++++++.++++++++++++++||||.+++
T Consensus 82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~--- 156 (353)
T TIGR03235 82 AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVD--ESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP--- 156 (353)
T ss_pred hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---
Confidence 55 778888777765533 345568899888875 34568999999999888899999999999999965
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
+++|+++|+++|+++++|++++.... +..+. ..+-.+++.|.+|.++.+| +|+++++++.... ..
T Consensus 157 ~~~I~~l~~~~~~~~ivD~a~~~g~~----~~~~~---~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~------~~ 221 (353)
T TIGR03235 157 IREIAEVLEAHEAFFHVDAAQVVGKI----TVDLS---ADRIDLISCSGHKIYGPKG--IGALVIRKRGKPK------AP 221 (353)
T ss_pred HHHHHHHHHHcCCEEEEEchhhcCCc----ccccc---ccCCCEEEeehhhcCCCCc--eEEEEEccCcccc------cc
Confidence 68888889999999999999875321 11121 1123378889999876666 7998887532100 00
Q ss_pred Hhhh-------hcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298 275 MKKY-------FDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFK 332 (343)
Q Consensus 275 l~~~-------~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~ 332 (343)
++.. ... .+.++.....++ .+++....+..+ .+++++++++.+++.|+. +|+++..
T Consensus 222 ~~~~~~~~~~~~~~~~gt~~~~~~~al-~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~ 286 (353)
T TIGR03235 222 LKPIMFGGGQERGLRPGTLPVHLIVGM-GEAAEIARRNAQAWEVKLRAMRNQLRDALQT-LGVKLNG 286 (353)
T ss_pred cCceeeCCCCcCccccCCCChHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeC
Confidence 1100 001 223333333333 444432222222 788899999999999988 5888543
No 206
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=1.7e-19 Score=167.45 Aligned_cols=224 Identities=19% Similarity=0.147 Sum_probs=156.8
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~ 153 (343)
....|++.++++.+ .+..++++++++++..++.+++++||+|+++.+.|......+.. .|.++..++.
T Consensus 59 t~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~ 130 (425)
T PRK06084 59 TNDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH 130 (425)
T ss_pred hHHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence 45789999999972 35667888889999999999999999999999999865444432 3555544432
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
.|++++++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+..... .++ .+
T Consensus 131 -------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~----~p~-~~-- 193 (425)
T PRK06084 131 -------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC----RPF-EH-- 193 (425)
T ss_pred -------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----Chh-hc--
Confidence 3799999999888999999999999999976 688888899999999999999853321 111 11
Q ss_pred CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH----------------------------HHHHh-h-hhcccc
Q 019298 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV----------------------------VERMK-K-YFDILG 283 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~----------------------------~~~l~-~-~~~~~~ 283 (343)
+..+++.|++|.++++|.++|.+++.+....+ .+. ....+ . ......
T Consensus 194 -gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~ 270 (425)
T PRK06084 194 -GADIVVHSLTKYIGGHGTSIGGIVVDSGKFPW--AEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGA 270 (425)
T ss_pred -CCCEEEECchhcccccccceeEEEEeCCccch--hhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCC
Confidence 23499999999999999999998885432110 000 00000 0 112233
Q ss_pred CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 284 DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 284 ~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
..+++..+.+ ..-| ..+-.+.++..++...+.+.|+.+|++. ++.|
T Consensus 271 ~l~~~~a~l~-lrgl---~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 317 (425)
T PRK06084 271 ALSPFNAFLI-LQGL---ETLALRMERHTENALKVARYLQQHPQVAWVKYA 317 (425)
T ss_pred CCCHHHHHHH-HcCc---CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 4455544433 2222 2333377777888888999999988876 5554
No 207
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.86 E-value=2.6e-19 Score=164.71 Aligned_cols=192 Identities=21% Similarity=0.334 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCC
Q 019298 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG 133 (343)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~ 133 (343)
+.-.+++.+.+..+.. |+ ...+++++.+++.+.+ +.+++++++|+++++..++..+ +++||+|+++.|+
T Consensus 11 ~~~~~~~~~~l~~~~~--~g----~~~~~~~~e~~la~~~----g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t 80 (375)
T PRK11706 11 GTELDYIQQAMSSGKL--CG----DGGFTRRCQQWLEQRF----GSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYT 80 (375)
T ss_pred HHHHHHHHHHHHcCCc--cC----CCHHHHHHHHHHHHHh----CCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCC
Confidence 4446677777665432 22 2345566666555433 3479999999999999887766 6899999999999
Q ss_pred CcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEcc
Q 019298 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (343)
Q Consensus 134 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ 213 (343)
|..+...+...|++++.+++++ +++.+|++++++++++++++|+++ |++|.. .++++|.++|+++|+++|+|+
T Consensus 81 ~~~~~~~~~~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~tk~i~~~---~~~G~~---~~~~~i~~la~~~~i~vIeD~ 153 (375)
T PRK11706 81 FVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIEAAITPKTRAIVPV---HYAGVA---CEMDTIMALAKKHNLFVVEDA 153 (375)
T ss_pred cHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcCCCCeEEEEe---CCCCCc---cCHHHHHHHHHHcCCEEEEEC
Confidence 9999999999999999998875 457899999999998888888865 468987 456788888999999999999
Q ss_pred CCCccc-cCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298 214 VYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF 279 (343)
Q Consensus 214 ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~ 279 (343)
+|+.+. +++.. ...+. .+.+.||+ |.++ +|.+.++++.+ +++.++++..+
T Consensus 154 a~a~g~~~~~~~---~g~~~----~~~~~Sf~~~K~l~-~g~gG~~~~~~--------~~~~~~~~~~~ 206 (375)
T PRK11706 154 AQGVMSTYKGRA---LGTIG----HIGCFSFHETKNYT-AGEGGALLIND--------PALIERAEIIR 206 (375)
T ss_pred ccccccccCCee---eecCc----CEEEEeCCCCcccc-ccCCeEEEECC--------HHHHHHHHHHH
Confidence 999765 33332 22222 14555655 9974 47776766542 46777666554
No 208
>PLN02651 cysteine desulfurase
Probab=99.86 E-value=3.1e-19 Score=163.76 Aligned_cols=262 Identities=14% Similarity=0.079 Sum_probs=171.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCC------CC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh--
Q 019298 51 FHTTHVATEAVAEALLSEKFNGY------AP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-- 120 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y------~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-- 120 (343)
.+.++.+.+++.+.+.....+.. .. ..-..++|+.+++++ +.++++|++++|+++++..++..+
T Consensus 9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~t~~~t~a~~~~l~~~~~ 82 (364)
T PLN02651 9 TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI------GADPKEIIFTSGATESNNLAIKGVMH 82 (364)
T ss_pred CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 35778899999887753211100 00 011345677777776 457789999999999988877664
Q ss_pred --cCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHH
Q 019298 121 --SRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195 (343)
Q Consensus 121 --~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l 195 (343)
.++||+|++....|+.+...+ ...|.+++.++.+ .++.+|+++++++++++++++++++++|+||...+ +
T Consensus 83 ~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~---l 157 (364)
T PLN02651 83 FYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP---V 157 (364)
T ss_pred hccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc---H
Confidence 468999999998887654332 3468888888775 34568999999999888999999999999999954 6
Q ss_pred HHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHH
Q 019298 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM 275 (343)
Q Consensus 196 ~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l 275 (343)
++|.++|+++|+++++|.+++... .+..+..+ +-.+++.|.+|.+|..| +|++.++++.....++.+...-
T Consensus 158 ~~I~~~~~~~g~~~~vD~a~~~g~----~~~~~~~~---~~D~~~~s~hK~~gp~G--~g~l~v~~~~~~~l~p~~~g~~ 228 (364)
T PLN02651 158 EEIGELCREKKVLFHTDAAQAVGK----IPVDVDDL---GVDLMSISGHKIYGPKG--VGALYVRRRPRVRLEPLMSGGG 228 (364)
T ss_pred HHHHHHHHHcCCEEEEEcchhhCC----cccCcccC---CCCEEEechhhhCCCCc--eEEEEEcCCCCCCCCccccCCC
Confidence 788899999999999999998622 11222222 23488999999643344 8888886543211111111000
Q ss_pred hhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCC
Q 019298 276 KKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKS 333 (343)
Q Consensus 276 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~ 333 (343)
.......+.++.....++ .++|+...+..+ .+++.++.++++.+.|.+ +||+++..|
T Consensus 229 ~~~~~~~GT~~~~~~~~l-~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~ 287 (364)
T PLN02651 229 QERGRRSGTENTPLVVGL-GAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGP 287 (364)
T ss_pred ccCCccCCCccHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECC
Confidence 000011233444433333 444443222223 677888888889988875 678886554
No 209
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.85 E-value=1.4e-19 Score=166.05 Aligned_cols=220 Identities=16% Similarity=0.156 Sum_probs=155.5
Q ss_pred CCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcC
Q 019298 72 GYAPT--AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRH 145 (343)
Q Consensus 72 ~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g 145 (343)
.|... ....+|++.++++++ .++++++++++.++..++. ++++||+|+++.+.|..+... +...|
T Consensus 40 ~Y~r~~~p~~~~le~~la~l~g--------~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G 110 (378)
T TIGR01329 40 DYTRSGNPTRTALESLLAKLDK--------ADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSG 110 (378)
T ss_pred ccCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcC
Confidence 46542 124567777777762 3567777777889998776 779999999999999876543 45578
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.+++.++. .|+++++++++++++++++++|+||+|.+. ++++|+++|+++|+++|+|++|..... .
T Consensus 111 ~~v~~vd~-------~d~~~le~~i~~~tklv~le~psnptg~v~---dl~~I~~la~~~g~~vivD~a~~~~~~----~ 176 (378)
T TIGR01329 111 VVVVHVDT-------TDLDKVKAALGPKTKLVLLESPTNPLQKIV---DIRKISEMAHAQNALVVVDNTMMSPLL----C 176 (378)
T ss_pred cEEEEeCC-------CCHHHHHHhcCcCceEEEEECCCCCCCeee---cHHHHHHHHHHcCCEEEEECCCccccc----C
Confidence 99888865 278999999988899999999999999995 588889999999999999999864221 1
Q ss_pred CcccccCCCCCEEEEccCccccCCC-CCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
.++. + +-.++++|++|.++.+ +.+.|++++++ +++.++++..+. .....++.....+ ...| ..
T Consensus 177 ~~l~-~---g~Di~v~S~tK~l~G~~~~~~G~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~-~~~l---~t 241 (378)
T TIGR01329 177 NPLE-L---GADIVYHSATKFLAGHSDVMAGVLAVKG-------EEIAKKVYFLQNSTGSGLAPFDCWLL-LRGI---KT 241 (378)
T ss_pred Chhh-c---CCcEEEEecceeccCCccceeEEEEeCc-------HHHHHHHHHHHHhcCCcCCHHHHHHH-HccC---CC
Confidence 1221 1 2239999999998764 47889988753 346666665544 2334455544433 2222 22
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298 304 IMIHGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
+-.+.++..++...+.+.|+++|.+.
T Consensus 242 l~~R~e~~~~na~~la~~L~~~~~v~ 267 (378)
T TIGR01329 242 LAIRIEKQQENARAIAMFLSTHPRVK 267 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 33366667777777778888776654
No 210
>PLN02509 cystathionine beta-lyase
Probab=99.85 E-value=3e-19 Score=166.28 Aligned_cols=227 Identities=16% Similarity=0.160 Sum_probs=159.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCc
Q 019298 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHI 146 (343)
Q Consensus 71 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~ 146 (343)
..|... |.+ .++++.+++.+.. ..++.++++|+++++..++ .++++||+|+++.|.|+.+... +...|.
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~le----g~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~ 197 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLD----KADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGV 197 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHh----CCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCe
Confidence 357654 554 4666666665533 3567777788889997666 5678999999999999987643 445688
Q ss_pred eeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC
Q 019298 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV 226 (343)
Q Consensus 147 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~ 226 (343)
+++.++. .|++++++++++++++|++++|+||+|.+ .++++|+++|+++|+++|+|++|+..... .
T Consensus 198 ~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~-~--- 263 (464)
T PLN02509 198 VVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVLS-R--- 263 (464)
T ss_pred EEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccccccC-C---
Confidence 8877743 36899999998889999999999999998 88999999999999999999998754322 1
Q ss_pred cccccCCCCCEEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHH
Q 019298 227 PMGVFGSTVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQI 304 (343)
Q Consensus 227 ~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~ 304 (343)
+.. .+..++++|++|.++.+|- -.|++++.+ +.+.++++..+.. ....+++..+++ ...| ..+
T Consensus 264 pl~----~gaDivv~S~tK~l~G~gdv~gG~v~~~~-------~~l~~~~~~~~~~~g~~l~p~~A~l~-lr~L---~tL 328 (464)
T PLN02509 264 PLE----LGADIVMHSATKFIAGHSDVMAGVLAVKG-------EKLAKEVYFLQNSEGSGLAPFDCWLC-LRGI---KTM 328 (464)
T ss_pred hhh----cCCcEEEecCcccccCCCccceeEEEecc-------HHHHHHHHHHHHhcCCCcCHHHHHHH-Hhhh---hhH
Confidence 111 1234999999999887554 456666533 2344544433322 223455544444 2222 233
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 305 MIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 305 l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
-.+.++..++...+.+.|+.+|.+. ++.|
T Consensus 329 ~~R~~r~~~nA~~la~~L~~~p~V~~V~yP 358 (464)
T PLN02509 329 ALRIEKQQENARKIAMYLSSHPRVKKVYYA 358 (464)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 3377888889999999999988876 5555
No 211
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.85 E-value=2.5e-19 Score=166.50 Aligned_cols=284 Identities=19% Similarity=0.094 Sum_probs=182.2
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-C-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-F-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+++.++||..|.-..+.++ .+|.+.+++++++.+.. . ..|.. ....+|.+.++++. ..++++++++++
T Consensus 37 dG~~~lD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~sGs 106 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGH-AHPALREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSGA 106 (406)
T ss_pred CCCEEEEcCcCHhhccCCC-CCHHHHHHHHHHHhhcccccCccCC-HHHHHHHHHHHhhC--------CCCeEEEcCCcH
Confidence 3778999988754332333 48999999999987421 1 11211 11234555555443 347999999999
Q ss_pred HHHHHHHHHhc--------CCCCeEEEeCCCCcchHHHHHhcCceeEE----eecCC--CCCCCCCHHHHHhhhcCCceE
Q 019298 111 QAIDVAMALLS--------RPGANILLPRPGFPIYELSAAFRHIEVRH----FDLLP--DKGWEVDLDDIESLADQNTVA 176 (343)
Q Consensus 111 ~al~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~g~~~~~----~~~~~--~~~~~~d~~~l~~~~~~~~~~ 176 (343)
+|+..+++... ....+|+..+.+|++....+...+..... .++.+ ......|++.+++.+.+++.+
T Consensus 107 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aa 186 (406)
T PRK12381 107 EANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCA 186 (406)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeE
Confidence 99999998852 13468999999998876544333321100 00000 001124789999988766666
Q ss_pred EEEeCCCCCccccc--CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 177 LVIINPGNPCGNVY--SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 177 i~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
+++ .|.|++|-+. +.+.+++|.++|++||+++|+||+|.++.+.+.. .....++.... +.|+||+++ +|+|+
T Consensus 187 vii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~-~~~~~~~v~pD---i~t~sK~l~-gG~~i 260 (406)
T PRK12381 187 VIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGEL-YAYMHYGVTPD---VLTTAKALG-GGFPI 260 (406)
T ss_pred EEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcch-hhhHhhCCCCC---EEEehhhhh-CCCce
Confidence 655 7999888654 7899999999999999999999999887665542 12112221122 358999987 79999
Q ss_pred EEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCC-Cce-ee
Q 019298 255 GWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIP-ELI-NF 331 (343)
Q Consensus 255 G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~-g~~-~~ 331 (343)
||+++++ ++++.+.... ..+++.+++.++++ .+.|+.. +--+.+++++++.+.+.+.|+++. ... +.
T Consensus 261 g~~~~~~--------~~~~~~~~~~~~~t~~~~pl~~aaa-~a~l~~l-~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 330 (406)
T PRK12381 261 GAMLTTE--------KCASVMTVGTHGTTYGGNPLASAVA-GKVLELI-NTPEMLNGVKQRHDWFVERLNTINARYGLFS 330 (406)
T ss_pred EEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHH-HHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhCCCEE
Confidence 9999853 6777776533 33456788888777 4444321 111277888888888888887651 121 11
Q ss_pred -CCCCceEeeec
Q 019298 332 -KSTGSSLKYLD 342 (343)
Q Consensus 332 -~~~~g~~~~~~ 342 (343)
....|.++|+.
T Consensus 331 ~vrg~Gl~~~~~ 342 (406)
T PRK12381 331 EIRGLGLLIGCV 342 (406)
T ss_pred EEecCeEEEEEE
Confidence 22346776664
No 212
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.85 E-value=3.5e-19 Score=164.09 Aligned_cols=266 Identities=16% Similarity=0.127 Sum_probs=170.5
Q ss_pred CcHHHHHHHHHHHhcC--CCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc------CC
Q 019298 53 TTHVATEAVAEALLSE--KFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS------RP 123 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~--~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~------~~ 123 (343)
+.+.+.+++...+... ....|+. ..-..++++.+++++ +++++++++++|+++++..++.++. ++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 105 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLL------HLPDAYGYIVSGGTEANIQAVRAAKNLAREEKR 105 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHh------CCCCCCeEEeccHHHHHHHHHHHHHHHHhccCC
Confidence 3455566666664432 1222321 011145666666666 3466788899999999988776653 46
Q ss_pred CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHh
Q 019298 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203 (343)
Q Consensus 124 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 203 (343)
||+|++++++|..+...++..|.+++.++.+ .++.+|++++++.+.+++..++++.|+||||... ++++|+++|+
T Consensus 106 g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~---~~~~i~~l~~ 180 (373)
T TIGR03812 106 TPNIIVPESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQID---DIEELSKIAL 180 (373)
T ss_pred CcEEEECCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccC---CHHHHHHHHH
Confidence 7899999999999999999999999999875 3567899999999877776566666899999994 5677888888
Q ss_pred hcCcEEEEccCCCccccC--C--CCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298 204 KLKTLVIADEVYGHLVFG--D--KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF 279 (343)
Q Consensus 204 ~~~~~~i~D~ay~~~~~~--~--~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~ 279 (343)
++|+++|+|++|+.+... . .....+. +...+-..+..|.+| |++++.+.|+++..+ +++++.++...
T Consensus 181 ~~~~~livD~a~~~~~~~~~~~~~~~~~~d-~~~~~~d~~~~s~~K-~~~~~~~~G~~~~~~-------~~~~~~l~~~~ 251 (373)
T TIGR03812 181 ENGIYLHVDAAFGGFVIPFLKKGYNPPPFD-FSLPGVQSITIDPHK-MGLSPIPAGGILFRS-------KSYLKYLSVDA 251 (373)
T ss_pred HcCCeEEEEcCchhHHHHHHhcCCCCCCcc-ccCCCCCEEEECccc-cCCCcCCceEEEEeC-------HHHHhhhcccC
Confidence 999999999999865321 0 0000110 000011245567889 578888898777643 34666554221
Q ss_pred cc-c--------cCcchHHHHHHHhccchhh-HH-HHHHHHHHHHHHHHHHHhhcCCCCce-eeCCCCceEeee
Q 019298 280 DI-L--------GDPATFIQVCIMYGCLSTI-MQ-IMIHGNFLENFAGSCVPSYKLIPELI-NFKSTGSSLKYL 341 (343)
Q Consensus 280 ~~-~--------~~~~~~~~~a~~~~~l~~~-~~-~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~~~~~ 341 (343)
.. . +..+.....++ .++|... .+ +-+.++++.++++.+.+.|+++ |+. +..+. ..++.+
T Consensus 252 ~~~~~~~~~~~~gt~~~~~~~~~-~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~v~~ 322 (373)
T TIGR03812 252 PYLTVKKQATITGTRSGASAAAT-YAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPV-LNIVAF 322 (373)
T ss_pred cccCCCCCcceEeechhHHHHHH-HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCC-ceEEEE
Confidence 11 0 12223333333 4444421 12 2237888999999999999988 554 43333 344443
No 213
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.85 E-value=1.6e-19 Score=166.09 Aligned_cols=250 Identities=16% Similarity=0.140 Sum_probs=167.5
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~ 130 (343)
.++.+.+++++.+... .....|. .-..++|+.++++++ ..-..+.|++++|++.++..++.++..+||.|++.
T Consensus 14 ~~~~~~~~~a~~~~~~-~~~~~~~--~~~~~~~~~l~~l~~----~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~ 86 (368)
T PRK13479 14 LTTSRTVREAMLRDWG-SWDDDFN--ALTASVRAKLVAIAT----GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVP 86 (368)
T ss_pred CCCCHHHHHHhCCCCC-CCChHHH--HHHHHHHHHHHHHhC----CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence 4567777777655431 1111122 234567777777763 11123568899999999999999999999999999
Q ss_pred CCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298 131 RPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (343)
Q Consensus 131 ~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 206 (343)
.++|.+. ...++..|.+++.++... ++.+|++++++.+++ +++++++++|+||||...+ +++|.++|++++
T Consensus 87 ~~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~ 161 (368)
T PRK13479 87 DNGAYGARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHG 161 (368)
T ss_pred eCCchHHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcC
Confidence 8888665 367788899999998753 356899999998864 4567889999999999976 567788888999
Q ss_pred cEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-----
Q 019298 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD----- 280 (343)
Q Consensus 207 ~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~----- 280 (343)
+++|+|+++.. +.. +..+... +..+++.|++|.+ +.+| +||++++. ++++++.....
T Consensus 162 ~~livDa~~~~---g~~-~~~~~~~---~~d~~v~s~~K~l~g~~G--~G~l~~~~--------~~~~~~~~~~~~~~~~ 224 (368)
T PRK13479 162 KRLIVDAMSSF---GAI-PIDIAEL---GIDALISSANKCIEGVPG--FGFVIARR--------SELEACKGNSRSLSLD 224 (368)
T ss_pred CEEEEEccccc---CCc-ccccccc---CceEEEecCccccccCCC--ceEEEECH--------HHHHHhhcCCCCeeec
Confidence 99999966533 222 1222222 2237778999975 5677 69999853 56665543211
Q ss_pred -------------cccCcchHHHHHHHhccchhh--H-HHHHHHHHHHHHHHHHHHhhcCCCCceee
Q 019298 281 -------------ILGDPATFIQVCIMYGCLSTI--M-QIMIHGNFLENFAGSCVPSYKLIPELINF 331 (343)
Q Consensus 281 -------------~~~~~~~~~~~a~~~~~l~~~--~-~~l~~~~~~~~~~~~~~~~L~~~~g~~~~ 331 (343)
....++.....++ .+++... . .+-+.+++++++++.+.+.|+++ |+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~t~~~~~~~~l-~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 289 (368)
T PRK13479 225 LYDQWAYMEKTGQWRFTPPTHVVAAF-YQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPL 289 (368)
T ss_pred HHHHHhhhcccCCCCCCCcHHHHHHH-HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCccc
Confidence 0113344443333 2333211 1 12236788999999999999888 77743
No 214
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.85 E-value=2.6e-19 Score=166.48 Aligned_cols=277 Identities=14% Similarity=0.079 Sum_probs=180.5
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++++++|+..|.-.. +.--.+|.+.++++++++.... ..+.......+|.+.+++++ ..+.+++++++++
T Consensus 39 ~g~~~lD~~~~~~~~-~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~ 109 (401)
T PRK00854 39 DGNRYLDCLSAYSAV-NQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT--------GSHKVLPMNSGAE 109 (401)
T ss_pred CCCEEEEcCcchhhc-cCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC--------CCCEEEEeCCcHH
Confidence 377889988775321 1112589999999999875322 11112223445666666664 2468999999999
Q ss_pred HHHHHHHHhcC---------CC-CeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCCCCCCCHHHHHh
Q 019298 112 AIDVAMALLSR---------PG-ANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIES 168 (343)
Q Consensus 112 al~~~~~~l~~---------~g-d~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~ 168 (343)
|+..+++.+.. +| ++|++..-+|.+....+...+.. +..++ ..|++.+++
T Consensus 110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~ 182 (401)
T PRK00854 110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEA 182 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHH
Confidence 99999998842 23 57787777776654333332221 11111 147899999
Q ss_pred hhcCCceEEEEeCCCCCcccccCH-HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc
Q 019298 169 LADQNTVALVIINPGNPCGNVYSY-QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW 247 (343)
Q Consensus 169 ~~~~~~~~i~~~~p~nptG~~~~~-~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 247 (343)
.+.+++++|++++|+||+|.+++. +.+++|.++|++||+++|+||+|.++.+.+... .....+.... +++ ++|.+
T Consensus 183 ~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~-~~~~~g~~~D-~~~--~~K~l 258 (401)
T PRK00854 183 AITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLL-AEEHEGIEAD-VTL--IGKAL 258 (401)
T ss_pred HhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHh-HHhhcCCCCC-EEE--ecccc
Confidence 998889999999999999999874 569999999999999999999998765544211 1111111112 333 37998
Q ss_pred CCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 019298 248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIP 326 (343)
Q Consensus 248 ~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~ 326 (343)
+...+|+||+++++ ++++.++... ...++.+++.++++ .+.|+...+ .+..++++++.+.+.+.|+++
T Consensus 259 ~gg~~~ig~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aa~-~a~L~~l~~-~~~~~~~~~~~~~l~~~L~~~- 327 (401)
T PRK00854 259 SGGFYPVSAVLSNS--------EVLGVLKPGQHGSTFGGNPLACAVA-RAALKVLTE-EGMIENAAEMGAYFLEGLRSI- 327 (401)
T ss_pred cCCccCeEEEEEcH--------HHHhcccCCCCCCCCCcCHHHHHHH-HHHHHHHHH-cCHHHHHHHHHHHHHHHHHhh-
Confidence 76558999999853 6777665432 22445688888777 555543211 116778888888888888876
Q ss_pred Cce---eeCCCCceEee
Q 019298 327 ELI---NFKSTGSSLKY 340 (343)
Q Consensus 327 g~~---~~~~~~g~~~~ 340 (343)
+.. ...+.|.++.|
T Consensus 328 ~~~~~~~~~g~g~~~~i 344 (401)
T PRK00854 328 RSNIVREVRGRGLMLAV 344 (401)
T ss_pred ccCceEEEeccceEEEE
Confidence 222 12445555544
No 215
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=2.6e-19 Score=165.03 Aligned_cols=218 Identities=16% Similarity=0.114 Sum_probs=154.3
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~ 153 (343)
...+|++.+|++++ .. +.++ +++++.++..++. ++++||+|+++.|.|+... ..++..|.+++.++.
T Consensus 55 ~~~~le~~lA~l~g------~~-~~v~-~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 55 TREALEDIIAELEG------GT-KGFA-FASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred hHHHHHHHHHHHhC------CC-CeEE-ECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 35689999999983 22 3444 4555778888886 6789999999999997533 344567988888865
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
. |++++++.+++++++|++++|+||||.+. ++++|.++|+++|+++|+|++|...... .+. .+
T Consensus 126 ~-------d~~~l~~~l~~~tklV~l~~p~NptG~~~---dl~~I~~la~~~g~~vvvD~a~~~~~~~----~~~-~~-- 188 (390)
T PRK08064 126 T-------NLEEVAQNIKPNTKLFYVETPSNPLLKVT---DIRGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL-DL-- 188 (390)
T ss_pred C-------CHHHHHHhcCCCceEEEEECCCCCCcEec---cHHHHHHHHHHcCCEEEEECCCCccccc----Cch-hh--
Confidence 2 68999999988899999999999999995 5778888899999999999999864321 111 11
Q ss_pred CCCEEEEccCccccCCC-CCcEEEEEEeCCCCCCCchHHHHHHhhhhcccc-CcchHHHHHHHhccchhhHHHHHHHHHH
Q 019298 234 TVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQVCIMYGCLSTIMQIMIHGNFL 311 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~l~~~~~~ 311 (343)
+..+++.|+||.++.+ |...|++++.+ ++++++++......+ ..++.....+ ..-+ ..+-.+.++.
T Consensus 189 -g~Divv~S~tK~~~G~~~~laG~~v~~~-------~~~~~~l~~~~~~~g~~~~~~~a~l~-~~gl---~tl~~R~~~~ 256 (390)
T PRK08064 189 -GADVVLHSATKFLAGHSDVLAGLAVVKD-------EELAQKLYFLQNSFGAVLGVQDCWLV-LRGL---KTLHVRLEHS 256 (390)
T ss_pred -CCcEEEeecceeccCCccceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hccc---CcHHHHHHHH
Confidence 3458999999998754 35678777643 468888877765322 3333333333 1221 2222377777
Q ss_pred HHHHHHHHHhhcCCCCce-eeCC
Q 019298 312 ENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 312 ~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
.++...+.+.|+++|.+. ++.|
T Consensus 257 ~~~a~~la~~L~~~~~v~~v~yp 279 (390)
T PRK08064 257 SETANKIALYLQEHPKVQNVYYP 279 (390)
T ss_pred HHHHHHHHHHHhcCCCcceEECC
Confidence 888888899998877654 4443
No 216
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.85 E-value=3.4e-19 Score=166.41 Aligned_cols=288 Identities=13% Similarity=0.114 Sum_probs=175.2
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++.++||..|..... ++ .+|.+.+++.+++.+... .+.+..+.+. ...+++.+....+.+.. ++++++++++++
T Consensus 40 G~~~lD~~~g~~~~~--lGh~~~~i~~a~~~~~~~~~~-~~~~~~~~~~-~~~la~~l~~~~~~~~~-~~~~f~~sGsea 114 (425)
T PRK08088 40 GREYLDFAGGIAVLN--TGHLHPKVVAAVEAQLKKLSH-TCFQVLAYEP-YLELCEKMNQKVPGDFA-KKTLLVTTGSEA 114 (425)
T ss_pred CCEEEEcCCchhhcC--CCCCCHHHHHHHHHHHhhCCC-ccccccCCHH-HHHHHHHHHHhCCCCCC-CEEEEeCCcHHH
Confidence 788999988875422 33 689999999999875422 2222223333 34777777654432222 467777777787
Q ss_pred HHHHHHHh---cCCCCeEEEeCCCCcchHHHHHhcCceeEE----------------eecCCCCCCCC--CHHHHHhhhc
Q 019298 113 IDVAMALL---SRPGANILLPRPGFPIYELSAAFRHIEVRH----------------FDLLPDKGWEV--DLDDIESLAD 171 (343)
Q Consensus 113 l~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~----------------~~~~~~~~~~~--d~~~l~~~~~ 171 (343)
++.+++.. .++ ..|+..+++|++....+...+..... ++... ++... +++.+++.+.
T Consensus 115 ~e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~ 192 (425)
T PRK08088 115 VENAVKIARAATKR-SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSEDDAIASIERIFK 192 (425)
T ss_pred HHHHHHHHHHHhCC-CeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc-cCccHHHHHHHHHHHHH
Confidence 77776654 334 46667799998877665554432110 11100 11111 1456777764
Q ss_pred ----CCceEEEEeCC--CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcc
Q 019298 172 ----QNTVALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (343)
Q Consensus 172 ----~~~~~i~~~~p--~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 245 (343)
.+..+.++..| ++++....+.+.+++|.++|++||+++|+||+|.++.+.+.. ..+. ..+.+..+.||||
T Consensus 193 ~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~-~~~~---~~~~~pdi~s~sK 268 (425)
T PRK08088 193 NDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTL-FAME---QMGVAADLTTFAK 268 (425)
T ss_pred hccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hHHh---hcCCCCCEEEEec
Confidence 23334555556 677777889999999999999999999999999987554431 1211 1123345789999
Q ss_pred ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHHHHHHh
Q 019298 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAGSCVPS 321 (343)
Q Consensus 246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~~~~~~ 321 (343)
.++ +|+|+||++++. ++++.+..... .+.+.+++.|.++ .+.|+.. .+.++ .++..++.++.+.+.
T Consensus 269 ~l~-~G~rig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l 338 (425)
T PRK08088 269 SIA-GGFPLAGVTGRA--------EVMDAIAPGGLGGTYAGNPIACAAA-LAVLKVFEQENLLQKANALGEKLKDGLLAI 338 (425)
T ss_pred ccc-CCCcceeeEecH--------HHHhhcCCCCCCCCCCcCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 986 899999999953 67777765432 3567788888888 5555432 12222 333333333334333
Q ss_pred hcCCCCceeeCCCCceEeeecC
Q 019298 322 YKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 322 L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+...|.+....+. |+++|+.|
T Consensus 339 ~~~~~~~~~v~g~-G~~~~l~l 359 (425)
T PRK08088 339 AEKHPEIGDVRGL-GAMIAIEL 359 (425)
T ss_pred HHhCCCeEEEecc-ceEEEEEE
Confidence 3445543321222 88899864
No 217
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.85 E-value=3.8e-19 Score=163.26 Aligned_cols=222 Identities=12% Similarity=0.123 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHhhhCCCCCCC--CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcch--HHHHHhcCceeEEeecCC
Q 019298 80 PLTRRAIAEYLSRDLPYKLTP--NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLLP 155 (343)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~--~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~ 155 (343)
.++|+.+++++ +.++ +.|++|+|+++++..++.++..+||.+++..+.+.+. ...++..|.+++.++.+
T Consensus 38 ~~~r~~la~l~------~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~- 110 (363)
T TIGR02326 38 EQIRQQLLALA------TAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTG- 110 (363)
T ss_pred HHHHHHHHHHh------CCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC-
Confidence 45677777777 3344 4799999999999999999988888877776666443 35677889999988875
Q ss_pred CCCCCCCHHHHHhhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 156 DKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 156 ~~~~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
.+..+|++.+++.++. +++++++++++||||..++ +++|+++|+++|+++|+|++++. +. .+..+..++
T Consensus 111 -~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~---g~-~~~~~~~~~- 181 (363)
T TIGR02326 111 -EVEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF---GG-IPIDIAELH- 181 (363)
T ss_pred -CCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc---cC-cccchhhcC-
Confidence 3456899999998864 3467788899999999976 57889999999999999988764 22 222333332
Q ss_pred CCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhhh------------------hc-cccCcchHHHHHH
Q 019298 234 TVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------------------FD-ILGDPATFIQVCI 293 (343)
Q Consensus 234 ~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~------------------~~-~~~~~~~~~~~a~ 293 (343)
..+++.|++|.+ +.+| +||++++. +.++++... .. ..+.++...+.++
T Consensus 182 --~D~~~~s~~K~l~~p~G--~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al 249 (363)
T TIGR02326 182 --IDYLISSANKCIQGVPG--FGFVIARQ--------AELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAF 249 (363)
T ss_pred --ccEEEecCccccccCCc--ceEEEECH--------HHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHH
Confidence 338889999986 4456 79999864 344443210 00 1124455555555
Q ss_pred Hhccchhh-HH--HHHHHHHHHHHHHHHHHhhcCCCCceee
Q 019298 294 MYGCLSTI-MQ--IMIHGNFLENFAGSCVPSYKLIPELINF 331 (343)
Q Consensus 294 ~~~~l~~~-~~--~l~~~~~~~~~~~~~~~~L~~~~g~~~~ 331 (343)
..++... .+ +-+.+++++++++++.+.|+++ |+.+.
T Consensus 250 -~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 288 (363)
T TIGR02326 250 -AQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPL 288 (363)
T ss_pred -HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeec
Confidence 3333321 11 2237788999999999999887 77643
No 218
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=5.2e-19 Score=161.57 Aligned_cols=202 Identities=15% Similarity=0.090 Sum_probs=146.5
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 177 (343)
..++++++++|+..++.+++++||+|+++.|.|+++.. .++..|.++..++.. +.+.+++++++++++|
T Consensus 81 ~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-------~~e~l~~al~~~TklV 153 (395)
T PRK05967 81 GTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-------IGAGIAKLMRPNTKVV 153 (395)
T ss_pred CEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-------CHHHHHHhcCcCceEE
Confidence 44555557999999999999999999999999998764 446678888877431 3577999998899999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEE
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGW 256 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~ 256 (343)
++++|+||++.. .++++|+++|+++|+++|+|++|....+- .++ .+ +-.+++.|.+|.++..| ...|+
T Consensus 154 ~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~~----~pl-~~---GaDivv~S~tKy~~Gh~d~~~G~ 222 (395)
T PRK05967 154 HTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLYF----RPL-DF---GVDISIHAATKYPSGHSDILLGT 222 (395)
T ss_pred EEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCceec----Chh-Hc---CCCEEEEecccccCCCCCeeEEE
Confidence 999999998766 89999999999999999999999863211 111 12 23499999999987755 55554
Q ss_pred EEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 257 FVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 257 i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
++. + +++.++++.... .....++.....+ ..-| ..+.-+.++..++...+.+.|+++|.+. ++.|
T Consensus 223 v~~-~-------~~~~~~l~~~~~~~G~~~~p~da~l~-~rgl---~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yP 289 (395)
T PRK05967 223 VSA-N-------EKCWPQLLEAHGTLGLCAGPDDTYQI-LRGL---RTMGIRLEHHRKSALEIARWLEGRPDVARVLHP 289 (395)
T ss_pred EEc-C-------HHHHHHHHHHHHHcCCCCCHHHHHHH-HcCc---ccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECC
Confidence 443 3 245555553332 2345566655544 2221 2233377888888889999999988776 5555
No 219
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.84 E-value=1.4e-18 Score=160.05 Aligned_cols=284 Identities=13% Similarity=0.048 Sum_probs=184.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a 112 (343)
++.++||..|.-. .+++.+|++.+++.+++.... .++. ....++++.+++.+.. .++ .++++++++++
T Consensus 28 g~~~lD~~s~~~~--~~lG~~p~v~~a~~~~~~~~~--~~~~-~~~~~~~~~la~~l~~------~~~~~~~~~~SGseA 96 (375)
T PRK04260 28 GKKYLDFSSGIGV--TNLGFHPQVQQALQKQAGLIW--HSPN-LYLNSLQEEVAQKLIG------DKDYLAFFCNSGAEA 96 (375)
T ss_pred CCEEEECCCCccc--ccCCCCHHHHHHHHHHHHhcC--cccC-ccCCHHHHHHHHHHhc------CcCCEEEEcCccHHH
Confidence 7789999877422 335668999999999987531 2322 3456788999987732 234 46888999999
Q ss_pred HHHHHHHhc--CCCCeEEEeCCCCcchH-HHHHhcCceeE--EeecC-CCCC--CCCCHHHHHhhhcCCceEEEEeCCCC
Q 019298 113 IDVAMALLS--RPGANILLPRPGFPIYE-LSAAFRHIEVR--HFDLL-PDKG--WEVDLDDIESLADQNTVALVIINPGN 184 (343)
Q Consensus 113 l~~~~~~l~--~~gd~vl~~~p~~~~~~-~~~~~~g~~~~--~~~~~-~~~~--~~~d~~~l~~~~~~~~~~i~~~~p~n 184 (343)
+..+++... ..+++|++.+.+|++.. ......+.+.. .+... .... ...|++.+++.+.++..++++..++|
T Consensus 97 ~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~v~~ 176 (375)
T PRK04260 97 NEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELVQG 176 (375)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECCeEC
Confidence 998888763 34578888888887533 23322222110 00000 0000 01378999988876777888888899
Q ss_pred Cccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298 185 PCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (343)
Q Consensus 185 ptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~ 263 (343)
++|... +.+.++++.++|+++|+++|+||+|.++...+... ........++ +.||||+++ +|+|+||+++++
T Consensus 177 ~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~-- 249 (375)
T PRK04260 177 ESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGLA-NGVPVGAMLAKS-- 249 (375)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEeccccc-CCcceEEEEEcH--
Confidence 999874 56789999999999999999999998875544321 2111222223 338999975 789999999963
Q ss_pred CCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEe
Q 019298 264 GMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLK 339 (343)
Q Consensus 264 ~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~ 339 (343)
++.+.+.... ..+.+.+++.+.++ .+.|+.. ..+++ .++..+..++.+.+.+.+.+.+.. .+..|+++
T Consensus 250 ------~~~~~~~~~~~~~t~~~~~~~~~aa-~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~g~~~ 321 (375)
T PRK04260 250 ------SLGGAFGYGSHGSTFGGNKLSMAAA-SATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTT-VRGLGYMI 321 (375)
T ss_pred ------HHHhhcCCCCCCCCCCcCHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeE-EeccceEE
Confidence 5666665432 23456678888777 5655432 23333 556666666667666666643332 23379999
Q ss_pred eecC
Q 019298 340 YLDL 343 (343)
Q Consensus 340 ~~~l 343 (343)
|++|
T Consensus 322 ~~~~ 325 (375)
T PRK04260 322 GIET 325 (375)
T ss_pred EEEe
Confidence 9864
No 220
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.84 E-value=4.7e-19 Score=162.50 Aligned_cols=225 Identities=15% Similarity=0.103 Sum_probs=153.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcC
Q 019298 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH 145 (343)
Q Consensus 70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g 145 (343)
+.+|+.+ -...|++.++++.+ .+..+++++++.++..++ .++++||+|++++|.|+... ..+...|
T Consensus 44 y~r~~~p-~~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~g 113 (380)
T PRK06176 44 YSRSGNP-TRFALEELIADLEG--------GVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNG 113 (380)
T ss_pred ccCCCCh-hHHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcC
Confidence 3444442 36789999999883 334455566677998766 56789999999999997543 3345567
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.++..++. .|++++++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+...+. .
T Consensus 114 i~v~~vd~-------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~-- 180 (380)
T PRK06176 114 LSCTIIDT-------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-N-- 180 (380)
T ss_pred eEEEEcCC-------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-C--
Confidence 77776643 3789999999888999999999999999954 678888899999999999999864332 1
Q ss_pred CcccccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
++ .+ +..+++.|++|.++.+|..+ |++++.+ +++.++++..+.. ....++.....+ ...+ ..
T Consensus 181 -p~-~~---gaDivv~S~tK~l~g~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~~~l~-~~gl---~t 244 (380)
T PRK06176 181 -PL-LL---GADIVVHSGTKYLGGHSDVVAGLVTTNN-------EALAQEIAFFQNAIGGVLGPQDSWLL-QRGI---KT 244 (380)
T ss_pred -cc-cc---CCCEEEecCceeccCCccceeeEEEecH-------HHHHHHHHHHHHHhcCCCCHHHHHHH-Hhcc---Cc
Confidence 11 11 23399999999998877544 4455432 3566767655443 223344433333 1111 11
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+-.+.++..++...+.+.|++.|.+. ++.|
T Consensus 245 l~~R~~~~~~~a~~la~~L~~~p~v~~v~~p 275 (380)
T PRK06176 245 LGLRMEAHQKNALCVAEFLEKHPKVEKVYYP 275 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 11255666677788888888877765 4444
No 221
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.83 E-value=1.4e-18 Score=161.60 Aligned_cols=286 Identities=13% Similarity=0.070 Sum_probs=171.5
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||..|.-. ..++ .+|.+.+++.++++.... .... -..+..+.+.+.+.+.. ..+.+++++++++
T Consensus 29 dg~~~lD~~~~~~~--~~~Gh~~p~v~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~~~~----~~~~~~~~~SGs~ 99 (400)
T PTZ00125 29 EGKKYYDFLSAYSA--VNQGHCHPKILAALINQAQKLTL-TSRA--FYNDVLGLAEKYITDLF----GYDKVLPMNSGAE 99 (400)
T ss_pred CCCEEEEcccCHhh--ccCCcCCHHHHHHHHHHHHhccc-cccc--ccCHHHHHHHHHHHhCC----CCCEEEEeCCcHH
Confidence 37889999887533 1122 689999999998764321 1111 11223344444443322 2368999999999
Q ss_pred HHHHHHHHhcC----------CCCeEEEeCCCCcchHHHHHhcCceeEEe----ecCCC--CCCCCCHHHHHhhhc-CCc
Q 019298 112 AIDVAMALLSR----------PGANILLPRPGFPIYELSAAFRHIEVRHF----DLLPD--KGWEVDLDDIESLAD-QNT 174 (343)
Q Consensus 112 al~~~~~~l~~----------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~----~~~~~--~~~~~d~~~l~~~~~-~~~ 174 (343)
++..+++.+.. .+++|+..+-+|.+............... +..+. .-...|++++++.++ +++
T Consensus 100 A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 179 (400)
T PTZ00125 100 AGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNV 179 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCe
Confidence 99999987741 34678888888876544333322111100 00000 000137999999886 567
Q ss_pred eEEEEeCCCCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCc
Q 019298 175 VALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (343)
Q Consensus 175 ~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r 253 (343)
+++++..++||||.+++ .+.+++|.++|++||+++|+||+|.++.+.+... .......... ++ ++||.++.+++|
T Consensus 180 ~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~-~~~~~~~~pd-~~--~~sK~l~~g~~~ 255 (400)
T PTZ00125 180 AAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL-AHDHEGVKPD-IV--LLGKALSGGLYP 255 (400)
T ss_pred EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-HHHhcCCCCC-EE--EEcccccCCCcC
Confidence 77877777999999986 5569999999999999999999998776554321 1111111112 33 468998765579
Q ss_pred EEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC----CCCc
Q 019298 254 LGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL----IPEL 328 (343)
Q Consensus 254 ~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~----~~g~ 328 (343)
+||+++++ ++++.+.... ..+.+.+++.+.++ .+.|+...+ .+..++++++.+.+.+.|++ .+.+
T Consensus 256 ig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa-~~~l~~i~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 325 (400)
T PTZ00125 256 ISAVLAND--------DVMLVIKPGEHGSTYGGNPLACAVA-VEALEVLKE-EKLAENAQRLGEVFRDGLKELLKKSPWV 325 (400)
T ss_pred cEEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 99999863 6777765442 22456677777776 444432110 01444555555656565544 2322
Q ss_pred eeeCCCCceEeeec
Q 019298 329 INFKSTGSSLKYLD 342 (343)
Q Consensus 329 ~~~~~~~g~~~~~~ 342 (343)
....+ .|.++|+.
T Consensus 326 ~~~~~-~g~~~~v~ 338 (400)
T PTZ00125 326 KEIRG-KGLLNAIV 338 (400)
T ss_pred EEEec-ccEEEEEE
Confidence 22344 45565553
No 222
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=2.4e-18 Score=160.18 Aligned_cols=226 Identities=16% Similarity=0.101 Sum_probs=158.0
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~ 153 (343)
....|++.++++.+ .+..++++++++++..++.+++++||+|+++.++|..... .+...|.+++.++.
T Consensus 64 ~~~~le~~lA~l~g--------~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 64 TNAVLEERVAALEG--------GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred cHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 35678899998883 3467888999999999999999999999999999986433 35667888887754
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
.|++.+++++++++++|++++|+||+|.+++ +++|+++|+++|+++|+|++|+.... ..++ .+
T Consensus 136 -------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~----~~pl-~~-- 198 (427)
T PRK05994 136 -------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL----IRPI-EH-- 198 (427)
T ss_pred -------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc----CCcc-cc--
Confidence 2789999999888999999999999999965 67888889999999999999985221 1111 12
Q ss_pred CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC-c----------hH-----HH-----------HHHhhhhccccCcc
Q 019298 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR-K----------PK-----VV-----------ERMKKYFDILGDPA 286 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~-~----------~~-----~~-----------~~l~~~~~~~~~~~ 286 (343)
+-.+++.|++|.++.+|-.+|.+++....+-+. + +. +. ...+.........+
T Consensus 199 -gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 277 (427)
T PRK05994 199 -GADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAIS 277 (427)
T ss_pred -CCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCC
Confidence 233999999999998888788777642211100 0 00 11 11111222233445
Q ss_pred hHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 287 TFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 287 ~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
++..+.+ ..-| ..+-.+.++..++...+.+.|+.+|++. ++.|
T Consensus 278 ~~~A~l~-~~~l---~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP 321 (427)
T PRK05994 278 PFNAFLI-LTGI---ETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYA 321 (427)
T ss_pred HHHHHHH-HcCc---ccHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 5544444 2222 2222266777778888889999888776 5554
No 223
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.83 E-value=5.6e-18 Score=156.24 Aligned_cols=256 Identities=16% Similarity=0.119 Sum_probs=171.3
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA--PTAG----LPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
.++.++|+..+ |.++..+|+++++..++++.--.+.-+ -..| +.+|++.+|+|+ ..+..++.+
T Consensus 101 ~r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--------g~e~all~s 169 (476)
T PLN02955 101 FKKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--------KKEDCLVCP 169 (476)
T ss_pred CceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--------CCCcEEEEC
Confidence 45789999988 567889999999999988642111000 1123 378999999999 456777777
Q ss_pred ChHHHHHHHHHHh--------------cCCCCeEEEeCCCCcchHHHHHhc----CceeEEeecCCCCCCCCCHHHHHhh
Q 019298 108 GCTQAIDVAMALL--------------SRPGANILLPRPGFPIYELSAAFR----HIEVRHFDLLPDKGWEVDLDDIESL 169 (343)
Q Consensus 108 g~~~al~~~~~~l--------------~~~gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~ 169 (343)
++..+...++.+| ..++|.|++..-.|.+....++.. +.++..++. -|++.|++.
T Consensus 170 SGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~ 242 (476)
T PLN02955 170 TGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSL 242 (476)
T ss_pred ChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHH
Confidence 7787777777776 245678889998998888888776 456665543 278888887
Q ss_pred hcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCcc
Q 019298 170 ADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSK 245 (343)
Q Consensus 170 ~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK 245 (343)
++. +.+.|++....++.|.+.+ +.+|.++|++||+++|+||+|+.++++...-.....++ ..+..|+++||||
T Consensus 243 L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsK 319 (476)
T PLN02955 243 LSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSK 319 (476)
T ss_pred HHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCcc
Confidence 743 2334444444899999976 67777778899999999999998887753322222222 1346799999999
Q ss_pred ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHh
Q 019298 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPS 321 (343)
Q Consensus 246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 321 (343)
+||+.| ||+++++ ++++.++.... +++...++...++..+++.....-...++++.++.+++.+.
T Consensus 320 A~G~~G---Gfi~gs~--------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~ 386 (476)
T PLN02955 320 AAGCHG---GFIACSK--------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL 386 (476)
T ss_pred chhccC---ceeecHH--------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 998887 9988853 57777775532 23333333333321333321111112667777777777763
No 224
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.83 E-value=2.4e-18 Score=152.69 Aligned_cols=257 Identities=16% Similarity=0.169 Sum_probs=183.4
Q ss_pred CCCcHHHHHHHHHHHhcC-----CCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh--c
Q 019298 51 FHTTHVATEAVAEALLSE-----KFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL--S 121 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~-----~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l--~ 121 (343)
.++.|++.++|...+... ..+.|+- ....++.|+.+|+.+ ++++++|++|+|++++.+++++.. .
T Consensus 11 Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~TEsnNlaI~g~~~a 84 (386)
T COG1104 11 TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGATESNNLAIKGAALA 84 (386)
T ss_pred CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCCcHHHHHHHHhhHHh
Confidence 467899999998887642 1222221 123467888999998 678899999999999999999873 2
Q ss_pred ----CCCCeEEEeCCCCcchHHHHHhc---CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 122 ----RPGANILLPRPGFPIYELSAAFR---HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 122 ----~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
+.|.+|++..-.|+.....++.+ |.++.+++++. +..+|+++|++++++++.+|.+...||-+|++ ++
T Consensus 85 ~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim~aNnE~G~I---Qp 159 (386)
T COG1104 85 YRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIMHANNETGTI---QP 159 (386)
T ss_pred hhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEEecccCeeec---cc
Confidence 25789999999999888877776 99999998875 45699999999999999999999999999999 77
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
+++|.++|+++++++++|.++.. |+-+..+..+. -.+...|-+|..|..| +|.+...+...+. | ++.-
T Consensus 160 I~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~---vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~--p-~i~G 227 (386)
T COG1104 160 IAEIGEICKERGILFHVDAVQAV----GKIPIDLEELG---VDLLSFSAHKFGGPKG--IGALYVRPGVRLE--P-LIHG 227 (386)
T ss_pred HHHHHHHHHHcCCeEEEehhhhc----CceeccccccC---cceEEeehhhccCCCc--eEEEEECCCCccC--c-eecc
Confidence 89999999999999999999987 33333333322 2378889999999998 7887774322111 1 1111
Q ss_pred HhhhhccccCcchHHHHHHHhccchhhHHHH-HHHHHHHHHHHHHHHhhcCC-CCcee
Q 019298 275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIM-IHGNFLENFAGSCVPSYKLI-PELIN 330 (343)
Q Consensus 275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l-~~~~~~~~~~~~~~~~L~~~-~g~~~ 330 (343)
-.......+++......+++..+++...+-+ +...++...|+.+.+.|... |++.+
T Consensus 228 GgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~ 285 (386)
T COG1104 228 GGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYL 285 (386)
T ss_pred CcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 1111222222222233333244444323333 38888889999999999864 66554
No 225
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.82 E-value=5.2e-18 Score=157.17 Aligned_cols=268 Identities=16% Similarity=0.082 Sum_probs=169.1
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
++++++||..|.-+.+.++ .+|.+.+++++++++.. ...|.. ....+|.+.++++. ..+.++++++++
T Consensus 33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~la~~L~~~~--------~~~~~~f~~SGs 102 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGNGYTN-EPVLRLAKKLVDAT--------FADKVFFCNSGA 102 (397)
T ss_pred CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccCccCC-HHHHHHHHHHHhhC--------CCCEEEEeCCcH
Confidence 3789999988753322333 68999999999987521 111221 12234555555443 246999999999
Q ss_pred HHHHHHHHHhc-------C-CCCeEEEeCCCCcchHHHHHh-cCceeEE---eecCCC--CCCCCCHHHHHhhhcCCceE
Q 019298 111 QAIDVAMALLS-------R-PGANILLPRPGFPIYELSAAF-RHIEVRH---FDLLPD--KGWEVDLDDIESLADQNTVA 176 (343)
Q Consensus 111 ~al~~~~~~l~-------~-~gd~vl~~~p~~~~~~~~~~~-~g~~~~~---~~~~~~--~~~~~d~~~l~~~~~~~~~~ 176 (343)
+++..+++... + ..++|+..+-+|++....+.. .+..... -+..+. .-...|++.+++.+.+++.+
T Consensus 103 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aa 182 (397)
T TIGR03246 103 EANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKTCA 182 (397)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccCeEE
Confidence 99999999762 1 235677777777665433322 2211100 000000 00013789999988777777
Q ss_pred EEEeCCCCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298 177 LVIINPGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255 (343)
Q Consensus 177 i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 255 (343)
+++..++++.|... +.+.+++|.++|++||+++|+||+|.++...+... ....++-... +.++||.++ .|+++|
T Consensus 183 vi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pD---i~t~~K~lg-gG~pig 257 (397)
T TIGR03246 183 VIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---ILTSAKALG-GGFPIG 257 (397)
T ss_pred EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCC---EEEeehhhh-CCccee
Confidence 77664466667554 88999999999999999999999998875554321 1111221112 237899986 789999
Q ss_pred EEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 019298 256 WFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~ 325 (343)
|+++++ ++.+.++... ..+++.++..++++ .+.|+.. +-.+..++++++.+.+.+.|+++
T Consensus 258 av~~~~--------~i~~~~~~~~~~~t~~~~p~~~aaa-~a~l~~~-~~~~l~~~~~~~~~~l~~~L~~l 318 (397)
T TIGR03246 258 AMLTTT--------EIAAHLKVGTHGTTYGGNPLACAVA-GKVLDLV-NTPELLAGVKQRHDLFVDGLEKI 318 (397)
T ss_pred EEEEcH--------HHHHhccCCCcCCCCCCCHHHHHHH-HHHHHHH-hhccHHHHHHHHHHHHHHHHHHH
Confidence 999853 5777665442 23445677777776 5554421 11126778888888888877764
No 226
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.82 E-value=6.4e-18 Score=155.97 Aligned_cols=241 Identities=21% Similarity=0.181 Sum_probs=165.2
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCC
Q 019298 54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRP 132 (343)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p 132 (343)
.+.-.+++.+++..+. |.......+||++++++++ .++.++++|+++++..++.++ .++||+|+++.+
T Consensus 9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g--------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~ 77 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVG--------AKYAVAFNSATSALHIACLALGVGPGDRVWTTPI 77 (380)
T ss_pred CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHC--------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCc
Confidence 3555777777776543 3333457899999999994 245667778899999999998 789999999999
Q ss_pred CCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc----CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcE
Q 019298 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (343)
Q Consensus 133 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 208 (343)
+|..+...+...|++++.+++++ +++.+|++++++.++ ++++++++ .|++|.. .++++|.++|+++|++
T Consensus 78 ~~~~~~~~~~~~G~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~---~~~~~i~~l~~~~~~~ 150 (380)
T TIGR03588 78 TFVATANCALYCGAKVDFVDIDP-DTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKS---VDMQAIAALAKKHGLK 150 (380)
T ss_pred chHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCcc---CCHHHHHHHHHHcCCE
Confidence 99999888899999999999865 346799999999998 67787775 4568877 4578888999999999
Q ss_pred EEEccCCCcc-ccCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcccc--
Q 019298 209 VIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-- 283 (343)
Q Consensus 209 ~i~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~-- 283 (343)
+|+|++++.. .+.+.. +.... .-.+.+.|++ |.++.+ ..|++++.+ +++.++++.......
T Consensus 151 lI~D~a~a~g~~~~~~~---~g~~~--~~d~~~~S~~~~K~~~~~--~GG~v~~~~-------~~~~~~~~~~~~~g~~~ 216 (380)
T TIGR03588 151 IIEDASHALGAEYGGKP---VGNCR--YADATVFSFHPVKIITTA--EGGAVTTND-------EELAERMRLLRSHGITK 216 (380)
T ss_pred EEEECCCcccCccCCEe---CCCcc--ccceEEEecCCCCccccc--CceEEEECC-------HHHHHHHHHHHHCCCCC
Confidence 9999999864 233322 12200 1137777876 776442 457777754 456666654422100
Q ss_pred ------------------------CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 284 ------------------------DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 284 ------------------------~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
..+.+ ++++..+.| ..+-+..++-+++.+.+.+.|..+|++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~n~~m~~l-~aa~g~~qL---~~l~~~~~~r~~~~~~~~~~L~~~~~~~~ 283 (380)
T TIGR03588 217 DPLLFEKQDEGPWYYEQQELGFNYRMTDI-QAALGLSQL---KKLDRFVAKRREIAARYDRLLKDLPYFTP 283 (380)
T ss_pred CcccccccccCcceeeeeccccccCccHH-HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCccC
Confidence 01111 222111112 22333556667777788888888877663
No 227
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.82 E-value=9e-18 Score=153.51 Aligned_cols=238 Identities=19% Similarity=0.123 Sum_probs=164.1
Q ss_pred HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCCCcch
Q 019298 59 EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPGFPIY 137 (343)
Q Consensus 59 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~~~~~ 137 (343)
+++.+.+..+. |.......++++.++++++ .+++++++|+++++..++..+ .++||+|+++.++|..+
T Consensus 3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~ 71 (352)
T cd00616 3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT 71 (352)
T ss_pred HHHHHHHHcCC---ccCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence 45556655443 3333457899999999983 357888889999999999998 58999999999999999
Q ss_pred HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc
Q 019298 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217 (343)
Q Consensus 138 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~ 217 (343)
...+...|.+++.+++++ +++.+|++.+++.+++++++++++ |++|... ++++|.++|+++|+++|+|++|..
T Consensus 72 ~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~---~~~~i~~l~~~~~i~li~D~a~~~ 144 (352)
T cd00616 72 ANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPV---HLYGNPA---DMDAIMAIAKRHGLPVIEDAAQAL 144 (352)
T ss_pred HHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEE---CCCCCcC---CHHHHHHHHHHcCCeEEEECCCCC
Confidence 999999999999998854 357799999999988788888876 4689875 467778888899999999999985
Q ss_pred cccCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccc-------------
Q 019298 218 LVFGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL------------- 282 (343)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~------------- 282 (343)
....... .+... ..+.+.|++ |.+ ++.+.|++++.+ +++.++++......
T Consensus 145 g~~~~~~--~~~~~----~d~~~~S~~~~K~~--~~~~gg~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (352)
T cd00616 145 GATYKGR--KVGTF----GDAGAFSFHPTKNL--TTGEGGAVVTND-------EELAERARLLRNHGRDRDRFKYEHEIL 209 (352)
T ss_pred CCeECCE--EcccC----cceeEEcCCCCCCC--cccCceEEEECC-------HHHHHHHHHHHHcCCCCCCCcccccee
Confidence 3221110 11111 126677776 886 333468888753 35666665432110
Q ss_pred ---cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 283 ---GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 283 ---~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
...+.+...+. ...+ ..+-+..++.+++.+.+.+.|++++|+.+..+
T Consensus 210 ~~~~~~~~~~aa~~-~~~l---~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~ 259 (352)
T cd00616 210 GYNYRLSEIQAAIG-LAQL---EKLDEIIARRREIAERYKELLADLPGIRLPDV 259 (352)
T ss_pred eeccCcCHHHHHHH-HHHH---HhhHHHHHHHHHHHHHHHHHhcCCCCccCCCC
Confidence 11222222222 1111 22223667778888999999999888885443
No 228
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=7e-18 Score=156.75 Aligned_cols=226 Identities=14% Similarity=0.049 Sum_probs=158.4
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~ 153 (343)
-..+|++.+|++.+ .+..++++++++|+..++.+++++||+|+++...|......+ ...|.+++.++.
T Consensus 65 ~~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 65 TVAVLEERVAALEG--------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 46789999999983 345788999999999999999999999999999997654443 447888888865
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
. |++++++++++++++|++.+|+||+|.+. ++++|+++|+++|+++|+|.+++..... .++ .+
T Consensus 137 ~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~---Di~~I~~la~~~gi~livD~t~a~~~~~----~pl-~~-- 199 (433)
T PRK08134 137 G-------DIDGWRAAIRPNTRLLFGETLGNPGLEVL---DIPTVAAIAHEAGVPLLVDSTFTTPYLL----RPF-EH-- 199 (433)
T ss_pred C-------CHHHHHHhcCCCCeEEEEECCCcccCccc---CHHHHHHHHHHcCCEEEEECCCcccccC----Cch-hc--
Confidence 2 78999999999999999999999999995 5788889999999999999998753221 111 12
Q ss_pred CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch-------------------------HHHHHHh--hhhccccCcc
Q 019298 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP-------------------------KVVERMK--KYFDILGDPA 286 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~-------------------------~~~~~l~--~~~~~~~~~~ 286 (343)
+-.+++.|.+|.++.+|..+|.+++......+.+. .+..+.+ .........+
T Consensus 200 -GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls 278 (433)
T PRK08134 200 -GADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLS 278 (433)
T ss_pred -CCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCC
Confidence 23499999999999999888887764322111000 0011111 1122222344
Q ss_pred hHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 287 TFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 287 ~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+...+.+ ..-| ..+-.+.++..++...+.+.|+.+|++. +..|
T Consensus 279 ~~~A~l~-~~gL---~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP 322 (433)
T PRK08134 279 PMNAWQL-LQGI---ETLPLRMERHVANTRKVVAFLASHPAVARVAHP 322 (433)
T ss_pred HHHHHHH-hcCC---CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 4433333 2222 2233377777888888888999887765 5444
No 229
>PRK07505 hypothetical protein; Provisional
Probab=99.81 E-value=1.1e-17 Score=155.49 Aligned_cols=253 Identities=15% Similarity=0.148 Sum_probs=153.1
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCC-----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAP-----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
++..+||+... +.++..+|++.+++.++++... .+.... .....++++.+++++ +. +.++.+
T Consensus 45 g~~~ld~~s~~---~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~------~~---~~~~~~ 112 (402)
T PRK07505 45 GHTFVNFVSCS---YLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF------GA---SVLTFT 112 (402)
T ss_pred CceEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh------CC---CEEEEC
Confidence 77889997753 2334678999999999987411 111111 122355666666665 22 444444
Q ss_pred ChHHHHHHHHHHhc----CCCC-eEEEeCCCCcc-hHH--HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEE
Q 019298 108 GCTQAIDVAMALLS----RPGA-NILLPRPGFPI-YEL--SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179 (343)
Q Consensus 108 g~~~al~~~~~~l~----~~gd-~vl~~~p~~~~-~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~ 179 (343)
+++++...+++.+. .+|+ .|++.+..|++ +.. .....+.+++.++. .|++.+++.++++++++++
T Consensus 113 sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~vl 185 (402)
T PRK07505 113 SCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVAYV 185 (402)
T ss_pred ChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEEEE
Confidence 55677777776543 2232 35566655533 211 11223455565543 3789999988777789999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC-CcccccC--CCCCEEEEccCccccCCCCCcEEE
Q 019298 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFG--STVPILTLGSLSKRWIVPGWRLGW 256 (343)
Q Consensus 180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-~~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~ 256 (343)
++|+||||.+++ +++|.++|+++++++|+||+|+...++.... .....++ ..+++++++|+||+|+++| ||
T Consensus 186 ~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~ 259 (402)
T PRK07505 186 ADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GV 259 (402)
T ss_pred EecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eE
Confidence 999999999987 5777788889999999999996544432211 1111222 2357899999999999887 88
Q ss_pred EEEeCCCCCCCchHHHHHHhhhhcc---ccCcchHHHHHHHhccch--hhHHHHHHHHHHHHHHHHHH
Q 019298 257 FVTTDPCGMFRKPKVVERMKKYFDI---LGDPATFIQVCIMYGCLS--TIMQIMIHGNFLENFAGSCV 319 (343)
Q Consensus 257 i~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~a~~~~~l~--~~~~~l~~~~~~~~~~~~~~ 319 (343)
+++++ +++++.++..... ..++++.+.+++ .+.+. ......+.++.++++...+.
T Consensus 260 ~~~~~-------~~~~~~~~~~~~~~t~~~~~~~~a~aa~-~a~l~~~~~~~~~~~~~~l~~~~~~~~ 319 (402)
T PRK07505 260 IMLGD-------AEQIELILRYAGPLAFSQSLNVAALGAI-LASAEIHLSEELDQLQQKLQNNIALFD 319 (402)
T ss_pred EEeCC-------HHHHHHHHHhCCCceeCCCCCHHHHHHH-HHHHHHHhccCcHHHHHHHHHHHHHHH
Confidence 77643 4677777665331 124455555555 44433 11112224455555554443
No 230
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=7.5e-18 Score=156.39 Aligned_cols=227 Identities=16% Similarity=0.059 Sum_probs=157.2
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~ 153 (343)
....|++.++++.+ .+..+++++++.|+..++.+++++||+|++....|...... +...|.+++.++
T Consensus 70 ~~~~Le~~lA~l~g--------~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 70 TQDVVEQRIAALEG--------GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred hHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 45688899988873 45678888889999999999999999999999888775543 333576666663
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
+. .|++++++++++++++|++.+|+||+|.+ .++++|.++|+++|+++|+|++++.... ..++ .+
T Consensus 141 d~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v---~Dl~~I~~la~~~gi~liVD~t~a~~~~----~~pl-~~-- 205 (436)
T PRK07812 141 DP-----DDLDAWRAAVRPNTKAFFAETISNPQIDV---LDIPGVAEVAHEAGVPLIVDNTIATPYL----IRPL-EH-- 205 (436)
T ss_pred CC-----CCHHHHHHhCCCCCeEEEEECCCCCCCee---cCHHHHHHHHHHcCCEEEEECCCccccc----CCch-hc--
Confidence 11 27999999998889999999999999999 4577888889999999999999875221 1111 11
Q ss_pred CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC-----------------------chHHHHHHh--hhhccccCcchH
Q 019298 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR-----------------------KPKVVERMK--KYFDILGDPATF 288 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~-----------------------~~~~~~~l~--~~~~~~~~~~~~ 288 (343)
+-.+++.|++|.++..|--+|++++.+....+. ++++..+.+ .........++.
T Consensus 206 -GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~ 284 (436)
T PRK07812 206 -GADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPF 284 (436)
T ss_pred -CCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHH
Confidence 233888999999999988888877753321110 011111111 112223445555
Q ss_pred HHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 289 IQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 289 ~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
..+.+ ..-| ..+-.+.++..++...+.+.|+++|++. ++.|
T Consensus 285 ~a~l~-~rgl---~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yP 326 (436)
T PRK07812 285 NAFLI-AQGL---ETLSLRIERHVANAQRVAEFLEARDEVASVNYA 326 (436)
T ss_pred HHHHH-hcCc---CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 44443 1221 2233377888889999999999998876 5555
No 231
>PLN00144 acetylornithine transaminase
Probab=99.80 E-value=8.9e-18 Score=154.52 Aligned_cols=282 Identities=16% Similarity=0.099 Sum_probs=173.2
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|.-.. .++ .+|++.+++++++..... +.. ....+....+++.+.+.. ..+.+++++++++
T Consensus 13 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGse 83 (382)
T PLN00144 13 EGKEYLDMAAGIAVN--ALGHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTE 83 (382)
T ss_pred CCCEEEECCcCHHhc--cCCCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHH
Confidence 388999998875321 233 689999999999875321 111 112334455555554321 3469999999999
Q ss_pred HHHHHHHHhc---C------C------CCeEEEeCCCCcchHHHHHhcCceeE----EeecCCCCC--CCCCHHHHHhhh
Q 019298 112 AIDVAMALLS---R------P------GANILLPRPGFPIYELSAAFRHIEVR----HFDLLPDKG--WEVDLDDIESLA 170 (343)
Q Consensus 112 al~~~~~~l~---~------~------gd~vl~~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~--~~~d~~~l~~~~ 170 (343)
+++.+++... . + ..+|+...-+|++....+........ ..+..+... .--|++.+++.+
T Consensus 84 A~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 163 (382)
T PLN00144 84 ANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLI 163 (382)
T ss_pred HHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhc
Confidence 9999988753 1 0 25788889899876655444322110 001000000 012688999887
Q ss_pred cCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC-cccccCCCCCEEEEccCcccc
Q 019298 171 DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRW 247 (343)
Q Consensus 171 ~~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~ 247 (343)
..+..+.++..| +||.|.. .+.+.+++|.++|++||+++|+||+|.++...+.... ....+.++ +.||||.+
T Consensus 164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l 238 (382)
T PLN00144 164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL 238 (382)
T ss_pred CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc
Confidence 644344445555 7885543 2455699999999999999999999999876654221 12223332 67889996
Q ss_pred CCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH---HHHHHHHHHHHHHHh--
Q 019298 248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI---HGNFLENFAGSCVPS-- 321 (343)
Q Consensus 248 ~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~---~~~~~~~~~~~~~~~-- 321 (343)
.+|+|+||++++. ++.+.+... ...++..+++.++++ .+.| ++++ ..+++++.++.+.+.
T Consensus 239 -~~G~pig~v~~~~--------~~~~~~~~~~~~~T~~~~pl~~aaa-~a~l----~~i~~~~~~~~~~~~g~~l~~~l~ 304 (382)
T PLN00144 239 -AGGLPIGAVLVTE--------KVASAINPGDHGSTFAGGPLVCNAA-LAVL----DKISKPGFLASVAKKGEYLRELLR 304 (382)
T ss_pred -cCCcceEEEEEcH--------HHHhccCCCCCCCCCCCCHHHHHHH-HHHH----HHHhhchHHHHHHHHHHHHHHHHH
Confidence 5789999999963 566666533 233567788888777 4333 2322 444444444444443
Q ss_pred --hcCCCCceeeCCCCceEeeecC
Q 019298 322 --YKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 322 --L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+.|.+.-... .|+++|+.|
T Consensus 305 ~~~~~~~~~~~vrg-~G~~~~l~l 327 (382)
T PLN00144 305 RKLGGNPHVKEVRG-VGLLVGIQL 327 (382)
T ss_pred HHHhhCCCceeeec-CceEEEEEe
Confidence 344444332122 899999864
No 232
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.80 E-value=3.1e-17 Score=146.89 Aligned_cols=193 Identities=23% Similarity=0.261 Sum_probs=150.3
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeC
Q 019298 53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPR 131 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~ 131 (343)
..+...+++.+.++.+.+.. ++ -..+|++++++|+ ...+.+.+++++.|+.+++++| .+|||.|+++.
T Consensus 13 i~~~e~~~v~~vl~sg~i~~-G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps 81 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLTG-GP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPS 81 (374)
T ss_pred cchHHHHHHHHHHHcCCeec-Ch--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecC
Confidence 34677888888888765533 33 4689999999999 5789999999999999999976 48999999999
Q ss_pred CCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 132 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
-+|......+...|++.+++++++ +.+.+|.+.+|+++++++++|+..+ -.|.. -++++|.++|++||++||+
T Consensus 82 ~TfvATan~i~~~Ga~PVFvDid~-~T~nid~~~ie~aIt~~tKAIipVh---l~G~~---~dm~~i~~la~~~~l~vIE 154 (374)
T COG0399 82 FTFVATANAVLLVGAKPVFVDIDP-DTLNIDPDLIEAAITPRTKAIIPVH---LAGQP---CDMDAIMALAKRHGLPVIE 154 (374)
T ss_pred CchHHHHHHHHHcCCeEEEEecCC-cccCCCHHHHHHHcccCCeEEEEeh---hccCC---CCHHHHHHHHHHcCCeEEE
Confidence 999999999999999999999987 4678999999999999999998443 44555 3677888888899999999
Q ss_pred ccCCCcc-ccCCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298 212 DEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF 279 (343)
Q Consensus 212 D~ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~ 279 (343)
|.+++.. .|.++...++ ++ +.+.|| +|.+... -.|.+++.| +++.++++.++
T Consensus 155 DaAqa~Ga~y~gk~vGt~---Gd----~~~fSF~~~K~ittg--EGGav~tnd-------~ela~k~~~lr 209 (374)
T COG0399 155 DAAQAHGATYKGKKVGSF---GD----IGAFSFHATKNLTTG--EGGAVVTND-------EELAEKARSLR 209 (374)
T ss_pred EcchhccCeecCcccccc---cc----eEEEEecCCCCcccc--CceEEEeCC-------HHHHHHHHHHH
Confidence 9999964 4445543333 32 556666 4664433 456676653 57888887764
No 233
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.80 E-value=4.2e-18 Score=138.77 Aligned_cols=165 Identities=15% Similarity=0.077 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH-HHHHhcCceeEEeecCCCCC
Q 019298 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE-LSAAFRHIEVRHFDLLPDKG 158 (343)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~ 158 (343)
.++++.+++++. .+.+++++++|+++++..+++++.+++++|++++++|.+.. ..+...|.++..++.+....
T Consensus 3 ~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 76 (170)
T cd01494 3 EELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGY 76 (170)
T ss_pred HHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCc
Confidence 578899999983 46789999999999999999999888999999999998888 78888899999888765433
Q ss_pred CCCCHHHHHhhh-cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCE
Q 019298 159 WEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI 237 (343)
Q Consensus 159 ~~~d~~~l~~~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~ 237 (343)
...+.+.+++.. ..+++.+++++++||+|...+. ++|.++|+++|+++|+|++|..+...... ......+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~----~~~~~~~~d 149 (170)
T cd01494 77 GGLDVAILEELKAKPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG----VLIPEGGAD 149 (170)
T ss_pred cchhhhhhhhccccCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc----cccccccCC
Confidence 333333555443 4578888999999999999765 77778888999999999999987655322 011122345
Q ss_pred EEEccCccccCCCCCcEEEEEE
Q 019298 238 LTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 238 i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
+++.|++|.|+. .++|++++
T Consensus 150 ~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 150 VVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred EEEEEcccccCC--CceEEEEe
Confidence 889999999876 66999876
No 234
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.80 E-value=2.5e-17 Score=150.07 Aligned_cols=262 Identities=14% Similarity=0.068 Sum_probs=175.4
Q ss_pred HHHHHH-HHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCC
Q 019298 55 HVATEA-VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPG 133 (343)
Q Consensus 55 ~~~~~~-~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~ 133 (343)
.++.++ +..+...+. .|..+.....|++++++++ ..++++.+++++.|++.++..+++|||.| +.++
T Consensus 50 ~aMs~~q~a~~~~GDe--~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~ 117 (450)
T TIGR02618 50 NAMSDKQWAGLMMGDE--AYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNM 117 (450)
T ss_pred HHHHHHHHHHhhhcch--hhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCce
Confidence 666666 666655443 4887778899999999999 45789999999999998877778999987 6677
Q ss_pred CcchHHH-HHhcCceeEEeecC--------CCCCCCCCHHHHHhhhcC----CceEEEEeCCCCC-cccccCHHHHHHHH
Q 019298 134 FPIYELS-AAFRHIEVRHFDLL--------PDKGWEVDLDDIESLADQ----NTVALVIINPGNP-CGNVYSYQHLQKLA 199 (343)
Q Consensus 134 ~~~~~~~-~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~np-tG~~~~~~~l~~l~ 199 (343)
|...... ....|..++.+..+ ....+.+|++++++++++ +++++++.+++|. .|+++|.++++++.
T Consensus 118 ~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~ 197 (450)
T TIGR02618 118 YFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVR 197 (450)
T ss_pred eHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHH
Confidence 7444443 67778755555333 134577999999999975 3446788888875 58999999999999
Q ss_pred HHHhhcCcEEEEccCCCc-c-cc-----CCCCCCcc----cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc
Q 019298 200 ETANKLKTLVIADEVYGH-L-VF-----GDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (343)
Q Consensus 200 ~~~~~~~~~~i~D~ay~~-~-~~-----~~~~~~~~----~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~ 268 (343)
++|++||+.+|+|.+... . .+ .+..-.++ ..+-.. -..+..|..|.++.+- -|++++.+
T Consensus 198 elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~-aD~~~~S~~Kd~~~~~--GG~l~~~d------- 267 (450)
T TIGR02618 198 ELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSY-ADGCTMSGKKDCLVNI--GGFLCMND------- 267 (450)
T ss_pred HHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhcc-CcEEEEeeccCCCCCC--ceEEEeCC-------
Confidence 999999999999999876 1 11 01111111 111111 1258899999977762 15555443
Q ss_pred hHHHHHHhhhhccc------cCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEee
Q 019298 269 PKVVERMKKYFDIL------GDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKY 340 (343)
Q Consensus 269 ~~~~~~l~~~~~~~------~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~ 340 (343)
+++.++++...-.. +....-...++..+ | .+.++ ...+-....++|.+.|.+. |+++..|.+|+-+|
T Consensus 268 ~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~g-L---~e~~~~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~ 342 (450)
T TIGR02618 268 DEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIG-I---REAVDYEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVF 342 (450)
T ss_pred HHHHHHHHHHhhhcCCccccCchhhhhHHHHHHH-H---HHhhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEE
Confidence 57888887763211 11122122222112 2 23333 2233333467778888888 89988899999999
Q ss_pred ecC
Q 019298 341 LDL 343 (343)
Q Consensus 341 ~~l 343 (343)
++.
T Consensus 343 vda 345 (450)
T TIGR02618 343 LDA 345 (450)
T ss_pred EEh
Confidence 863
No 235
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.80 E-value=2.5e-17 Score=150.85 Aligned_cols=238 Identities=22% Similarity=0.254 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCC
Q 019298 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG 133 (343)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~ 133 (343)
++.++++.+.++.+.+..+++ -..+|++++++++ +.++++.+++++.||.+++.++ +++||+|+++.-+
T Consensus 5 ~e~~~~v~~~l~s~~~~~~g~--~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t 74 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLSTYGP--YVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYT 74 (363)
T ss_dssp HHHHHHHHHHHHHTCCSSSSH--HHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS
T ss_pred HHHHHHHHHHHHhCCccCCCH--HHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCc
Confidence 556777788887765544433 4689999999999 4689999999999999999998 4789999999999
Q ss_pred CcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEcc
Q 019298 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (343)
Q Consensus 134 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ 213 (343)
|......+...|++++.+++++ +++.+|++.+++.+++++++|++.+. .|.. .++.+|.++|+++|+++|+|.
T Consensus 75 ~~~~~~ai~~~G~~pv~~Di~~-~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~---~d~~~i~~~~~~~~i~lIeD~ 147 (363)
T PF01041_consen 75 FPATASAILWAGAEPVFVDIDP-ETLNIDPEALEKAITPKTKAILVVHL---FGNP---ADMDAIRAIARKHGIPLIEDA 147 (363)
T ss_dssp -THHHHHHHHTT-EEEEE-BET-TTSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-
T ss_pred chHHHHHHHHhccEEEEEeccC-CcCCcCHHHHHHHhccCccEEEEecC---CCCc---ccHHHHHHHHHHcCCcEEEcc
Confidence 9999999999999999999986 56789999999999999999986654 4444 478999999999999999999
Q ss_pred CCCcccc-CCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccc--------
Q 019298 214 VYGHLVF-GDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL-------- 282 (343)
Q Consensus 214 ay~~~~~-~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~-------- 282 (343)
+++.... .+.. +..+++ +.+.|| +|.+.. -..|.+++.+ +++.++++.++...
T Consensus 148 a~a~g~~~~g~~---~G~~gd----~~~fSf~~~K~i~~--geGG~v~~~~-------~~~~~~~~~~~~~g~~~~~~~~ 211 (363)
T PF01041_consen 148 AQAFGARYKGRP---VGSFGD----IAIFSFHPTKIITT--GEGGAVVTND-------PELAERARALRNHGRSRDAFRR 211 (363)
T ss_dssp TTTTT-EETTEE---TTSSSS----EEEEESSTTSSS-S--SS-EEEEEST-------HHHHHHHHHHTBTTEETSECST
T ss_pred ccccCceeCCEe---ccCCCC----ceEecCCCCCCCcC--CCCeeEEecH-------HHHHHHhhhhhccCcCcccccc
Confidence 9997432 3322 222332 777787 577532 2347787754 56888887664311
Q ss_pred ----------cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298 283 ----------GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 283 ----------~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
...+.+ ++++...-|.. +-+..++-+++.+.+.+.|..++++.
T Consensus 212 ~~~~~~~g~n~rm~~~-~AAigl~QL~~---L~~~~~~R~~~a~~y~~~L~~~~~~~ 264 (363)
T PF01041_consen 212 YRHELPPGYNFRMSEL-QAAIGLAQLKR---LDEIIARRRENAQRYREALAGIPGIK 264 (363)
T ss_dssp TEESSSS--B-B-BHH-HHHHHHHHHHT---HHHHHHHHHHHHHHHHHHHTTGTTEE
T ss_pred ccccccCCcccccHHH-HHHHHHHHHHH---hhhhHHHHHHHHHHHHHHHhcCCCcc
Confidence 112222 33332333322 22244555566777788888887775
No 236
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.79 E-value=2.4e-16 Score=146.97 Aligned_cols=207 Identities=17% Similarity=0.196 Sum_probs=145.5
Q ss_pred eEeccCCCCCCCCC-CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHH
Q 019298 38 ISLAMGDPTVHSCF-HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116 (343)
Q Consensus 38 i~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~ 116 (343)
..|++|.|...... ..++.-.+++.+.+..... .+++ ...+|+++++++++ .+++++++|+++++..+
T Consensus 26 ~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~-~~G~--~~~~fe~~lA~~~g--------~~~~v~~~sGt~al~~a 94 (438)
T PRK15407 26 KPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL-TTGR--FNDAFEKKLAEFLG--------VRYALLVNSGSSANLLA 94 (438)
T ss_pred ccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc-cCCh--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHH
Confidence 44788887532111 1223333434444433221 2332 35789999999993 35799999999999998
Q ss_pred HHHh---------cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcc
Q 019298 117 MALL---------SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187 (343)
Q Consensus 117 ~~~l---------~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG 187 (343)
+.++ +++||+|+++.++|..+...+...|++++.+++++ ..+.+|++.+++.+++++++|+++++ +|
T Consensus 95 L~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~---~G 170 (438)
T PRK15407 95 FSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT---LG 170 (438)
T ss_pred HHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---CC
Confidence 8876 37899999999999999999999999999998865 45789999999999888999988775 44
Q ss_pred cccCHHHHHHHHHHHhhcCcEEEEccCCCccc-cCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCC
Q 019298 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCG 264 (343)
Q Consensus 188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~ 264 (343)
.. .++++|.++|+++|+++|+|++|+... +.+.. ..++.+ +.+.||+ |.+. .|. .|++++.+
T Consensus 171 ~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~---~G~~gd----~~~fSf~~~k~~~-~ge-GG~l~t~d--- 235 (438)
T PRK15407 171 NP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRM---TGTFGD----IATLSFYPAHHIT-MGE-GGAVFTND--- 235 (438)
T ss_pred Ch---hhHHHHHHHHHHCCCEEEEECccchhhhcCCee---eeccCc----eEEEeCCCCCCcc-ccC-ceEEEECC---
Confidence 43 468899999999999999999998743 23332 222332 5666765 5443 344 48888864
Q ss_pred CCCchHHHHHHhhh
Q 019298 265 MFRKPKVVERMKKY 278 (343)
Q Consensus 265 ~~~~~~~~~~l~~~ 278 (343)
+++.++++..
T Consensus 236 ----~~l~~~~~~~ 245 (438)
T PRK15407 236 ----PLLKKIIESF 245 (438)
T ss_pred ----HHHHHHHHHH
Confidence 4566655544
No 237
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.79 E-value=1.1e-17 Score=145.43 Aligned_cols=267 Identities=16% Similarity=0.136 Sum_probs=183.3
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~ 130 (343)
.++.|+++++|..+-. .....|+..+-...+.+.+++.+ ..+.+++++++|.+..+++.++++||+.|++.
T Consensus 10 ~g~~~~m~eam~~a~~-~~~~~YG~D~~~~~~e~~~ae~~--------g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~ 80 (342)
T COG2008 10 AGPTPEMREALAAANA-VGDDVYGEDPTTNALEQRIAELF--------GKEAALFVPSGTQANQLALAAHCQPGESVICH 80 (342)
T ss_pred CCCCHHHHHHHHhccc-cCCCCCCCCHHHHHHHHHHHHHh--------CCceEEEecCccHHHHHHHHHhcCCCCeEEEe
Confidence 5688999999988753 23346887766677777777777 23899999999999999999999999999999
Q ss_pred CCCCcchHH--HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 019298 131 RPGFPIYEL--SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETA 202 (343)
Q Consensus 131 ~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 202 (343)
.-.|..... .....+ ....++..+..+..+++|+++..++. .++++++.+.+|-.|.++|.+++++|.++|
T Consensus 81 ~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~ 159 (342)
T COG2008 81 ETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVC 159 (342)
T ss_pred ccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHH
Confidence 888843221 122222 22334444556678999999997752 456777777777899999999999999999
Q ss_pred hhcCcEEEEccCCCcc--ccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc
Q 019298 203 NKLKTLVIADEVYGHL--VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD 280 (343)
Q Consensus 203 ~~~~~~~i~D~ay~~~--~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~ 280 (343)
+++|+.+..|.+--.. +..+. +...+-.... .+..++||..+.+ +|.+++.| .+++++++..+.
T Consensus 160 k~~~l~LHmDGAR~~nA~valg~---~~~~~~~~~D-~v~~~~tK~g~~~---~gAiv~gn-------~~~~~~a~~~rK 225 (342)
T COG2008 160 KEHGLPLHMDGARLANALVALGV---ALKTIKSYVD-SVSFCLTKGGGAP---VGAIVFGN-------RDFAKRARRWRK 225 (342)
T ss_pred HHhCCceeechHHHHHHHHHcCC---CHHHHHhhCC-EEEEecccCCcce---eeeEEEcC-------HHHHHHHHHHHH
Confidence 9999999999885432 21222 2222222112 5666799996555 58888865 568887766643
Q ss_pred cc---cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 281 IL---GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 281 ~~---~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.. .+-..+..++. ..+|++ .-|...-.+-.+....+.+.|+..||+++..|..++.+|+++
T Consensus 226 ~~Ggl~~k~r~laA~~-~~~l~~-~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l 289 (342)
T COG2008 226 RAGGLMRKARFLAAQG-LYALED-DVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRL 289 (342)
T ss_pred HhcccHhhhhHHHHHH-HHHHhc-cHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEEC
Confidence 21 12223333333 333333 224444444555588888999988899977778888888764
No 238
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.78 E-value=4.9e-17 Score=151.42 Aligned_cols=287 Identities=16% Similarity=0.113 Sum_probs=172.8
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
+++.++|+..|.-.... --.+|.+.+++++++.......+.. ...+....+++.+..... ....+.+++++++++|
T Consensus 38 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGseA 113 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNT-GHRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAP-VSGQAKTAFFTTGAEA 113 (421)
T ss_pred CCCEEEEccCchhhhcC-CCCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCC-CCCCceEEEeCChHHH
Confidence 38889999877633211 2268999999999987532212211 122333444444433211 0123688999999999
Q ss_pred HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCCCCCC----CHHHHHhhhcC
Q 019298 113 IDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGWEV----DLDDIESLADQ 172 (343)
Q Consensus 113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~----d~~~l~~~~~~ 172 (343)
++.+++.... ...+|+....+|++....+... +. .+..++...+. ..+ +++.+++.+..
T Consensus 114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~ 192 (421)
T PRK09792 114 VENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKS 192 (421)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHh
Confidence 9999887642 2357888888887764433322 21 11222221111 112 24677777652
Q ss_pred ----CceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc
Q 019298 173 ----NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR 246 (343)
Q Consensus 173 ----~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 246 (343)
+..+.++..| ++++|..+ +.+.+++|.++|++||+++|+||++.++.+.+.. .....++..+. +.+|+|.
T Consensus 193 ~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t~gK~ 268 (421)
T PRK09792 193 DIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMTMAKS 268 (421)
T ss_pred ccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEEeehh
Confidence 2334444555 89999875 8999999999999999999999999998776543 23333322222 5688999
Q ss_pred cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhc
Q 019298 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYK 323 (343)
Q Consensus 247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~ 323 (343)
++ +|+++||++++. ++.+.+.... ..++..++++++++ .+.++-. .. ..+++++..+.+.+.|+
T Consensus 269 l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa-~a~l~~l~~~~---~~~~~~~~g~~l~~~l~ 335 (421)
T PRK09792 269 LA-GGMPLSGVVGNA--------NIMDAPAPGGLGGTYAGNPLAVAAA-HAVLNIIDKES---LCERANQLGQRLKNTLI 335 (421)
T ss_pred hc-CCCceEEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHH-HHHHHHHHhhh---HHHHHHHHHHHHHHHHH
Confidence 76 789999999853 5666654332 23567788888866 4443211 12 33333333333333333
Q ss_pred ----CCCCceeeCCCC-ceEeeecC
Q 019298 324 ----LIPELINFKSTG-SSLKYLDL 343 (343)
Q Consensus 324 ----~~~g~~~~~~~~-g~~~~~~l 343 (343)
++|. +..+.| |+++|+.|
T Consensus 336 ~l~~~~p~--v~~vrG~Gl~~~ie~ 358 (421)
T PRK09792 336 DAKESVPA--IAAVRGLGSMIAAEF 358 (421)
T ss_pred HHHHhCCC--cceecccceEEEEEe
Confidence 2442 335677 99999864
No 239
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.78 E-value=9.6e-17 Score=151.76 Aligned_cols=205 Identities=17% Similarity=0.174 Sum_probs=149.7
Q ss_pred eccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC---CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHH
Q 019298 40 LAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY---APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116 (343)
Q Consensus 40 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y---~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~ 116 (343)
++.|.++ +..+|.+.+++.+.......+.| ...+|..+++.++.+++.+.+|. +...+..++|+.+.+..+
T Consensus 73 ~g~G~~~----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~--~~~~l~~~~GA~a~~~~l 146 (481)
T PRK04366 73 YPLGSCT----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM--DAVTLQPAAGAHGELTGL 146 (481)
T ss_pred ecCcccC----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC--CceEEEeCcHHHHHHHHH
Confidence 5666644 56778888888775222244567 34568889999999999887775 334555556666555433
Q ss_pred --HH-HhcCCCC----eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccc
Q 019298 117 --MA-LLSRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189 (343)
Q Consensus 117 --~~-~l~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~ 189 (343)
++ .+.++|| +|++++|+|+.+...+...|.+++.++++ .++.+|+++|++.++++++++++++|+ |||..
T Consensus 147 ~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~ 223 (481)
T PRK04366 147 LMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGLF 223 (481)
T ss_pred HHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Ccccc
Confidence 22 3456666 99999999999999999999999999874 346799999999998889999999988 99964
Q ss_pred cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCC----CCcEEEEEEeC
Q 019298 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP----GWRLGWFVTTD 261 (343)
Q Consensus 190 ~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~----G~r~G~i~~~~ 261 (343)
.+++++|+++|+++|+++++|.++.....+-. ....+ +-.++++|.+|.|+.| |..+|++.+++
T Consensus 224 --~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~---~~~~~---GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~ 291 (481)
T PRK04366 224 --ERNILEIAEIVHEAGGLLYYDGANLNAILGKA---RPGDM---GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKE 291 (481)
T ss_pred --chHHHHHHHHHHHcCCEEEEEecChhhhcccC---Ccccc---CCCEEEEechhhcCCCCCCCCCCeeeeeehh
Confidence 35799999999999999999999863211111 11222 2348999999998754 45688887753
No 240
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.78 E-value=6.7e-17 Score=147.31 Aligned_cols=220 Identities=18% Similarity=0.194 Sum_probs=157.8
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeecC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLL 154 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~ 154 (343)
...|++.++++- ..+.++++++++.|+..++.+++++||+|+++...|.+....++. .|.++..++.
T Consensus 57 ~~~le~~la~Le--------~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~- 127 (386)
T PF01053_consen 57 VRALEQRLAALE--------GGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP- 127 (386)
T ss_dssp HHHHHHHHHHHH--------T-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-
T ss_pred HHHHHHHHHHhh--------cccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc-
Confidence 356888888887 347899999999999999999999999999999999887765554 5888877743
Q ss_pred CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC-cEEEEccCCCccccCCCCCCcccccCC
Q 019298 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK-TLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~-~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
-|++++++++++++++|++.+|.||+..+ .++++++++|+++| +++++|+.++....- .++ .++
T Consensus 128 ------~d~~~l~~~l~~~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~----~pL-~~G- 192 (386)
T PF01053_consen 128 ------TDLEALEAALRPNTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFATPYNQ----NPL-ELG- 192 (386)
T ss_dssp ------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC-----GG-GGT-
T ss_pred ------hhHHHHHhhccccceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeeccccceeee----ccC-cCC-
Confidence 37899999999999999999999999888 78899999999998 999999999863211 111 122
Q ss_pred CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLE 312 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~ 312 (343)
-.+++.|.+|.++..|.-+|.+++.++ .+++.++++..... ....++.....+ ++....+--+.++..
T Consensus 193 --aDivv~S~TKyl~Ghsdv~~G~vv~~~-----~~~~~~~l~~~~~~~G~~~~p~da~ll----~rgl~Tl~~R~~~~~ 261 (386)
T PF01053_consen 193 --ADIVVHSATKYLSGHSDVMGGAVVVNG-----SSELYDRLREFRRLLGATLSPFDAWLL----LRGLRTLPLRMERQN 261 (386)
T ss_dssp ---SEEEEETTTTTTTSSSE-EEEEEESS-----HHHHHHHHHHHHHHHT-B--HHHHHHH----HHHHTTHHHHHHHHH
T ss_pred --ceEEEeeccccccCCcceeeEEEEECc-----hhhhhhhhcchhhhcCccchHHHHHHH----hcCCCcHHHHHHHHH
Confidence 239999999999887766665555332 13677777665432 334455444444 111122223788888
Q ss_pred HHHHHHHHhhcCCCCce-eeCC
Q 019298 313 NFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 313 ~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
++...+.+.|+.+|.+. |+.|
T Consensus 262 ~nA~~lA~~L~~hp~V~~V~yP 283 (386)
T PF01053_consen 262 ENAEALAEFLEEHPKVKRVYYP 283 (386)
T ss_dssp HHHHHHHHHHHTSTTEEEEEET
T ss_pred HHHHHHHHHHHhCCCCCeEEEc
Confidence 99999999999998877 6655
No 241
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.78 E-value=2.5e-17 Score=153.84 Aligned_cols=243 Identities=19% Similarity=0.101 Sum_probs=156.9
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
+++.++||..|.+....+ ..+|.+.+++++++++.. ..|.+..+..+|.+.+++.+ + ..+.+++++|+++|
T Consensus 48 dG~~~lD~~~g~~~~~lG-h~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~------~-~~~~v~~~~sGseA 118 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILG-HAHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELV------P-SIEMVRMVNSGTEA 118 (426)
T ss_pred CCCEEEEcccchhhhhcC-CCCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhC------C-CCCEEEEecCHHHH
Confidence 378999999987553222 278999999999998643 33444444556666666554 1 35789999999999
Q ss_pred HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Ccee------------EEeecCCCCCCCCCHHHHHhhhcC---Cc
Q 019298 113 IDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HIEV------------RHFDLLPDKGWEVDLDDIESLADQ---NT 174 (343)
Q Consensus 113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~~~------------~~~~~~~~~~~~~d~~~l~~~~~~---~~ 174 (343)
+..+++.... .+++|+..+++|+++...+... |... ..+..........|++.+++.+.. ++
T Consensus 119 ~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~ 198 (426)
T PRK00062 119 TMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEI 198 (426)
T ss_pred HHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcE
Confidence 9999988543 3578999999999876433222 1100 000000000001268888887742 44
Q ss_pred eEEEEeCCCCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCc
Q 019298 175 VALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (343)
Q Consensus 175 ~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r 253 (343)
.++++......+|.+.+ .+.+++|.++|++||+++|+||+|.++..++.. ....++..+. +.++||.++ .|++
T Consensus 199 aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~--~~~~~~~~pD---i~~~gK~l~-~G~p 272 (426)
T PRK00062 199 AAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGG--AQGYYGVTPD---LTTLGKIIG-GGLP 272 (426)
T ss_pred EEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCcc--HHHHhCCCcc---hHhhhhHhh-CCCc
Confidence 45555533555888875 888999999999999999999999987443211 1111221112 468999987 7899
Q ss_pred EEEEEEeCCCCCCCchHHHHHHhhh---hc-cccCcchHHHHHHHhccch
Q 019298 254 LGWFVTTDPCGMFRKPKVVERMKKY---FD-ILGDPATFIQVCIMYGCLS 299 (343)
Q Consensus 254 ~G~i~~~~~~~~~~~~~~~~~l~~~---~~-~~~~~~~~~~~a~~~~~l~ 299 (343)
+|+++++ +++.+.++.. .. .+.+.+++.++++ .+.|+
T Consensus 273 ~ga~~~~--------~~i~~~~~~~~~~~~~~T~~~~p~~~aaa-~a~L~ 313 (426)
T PRK00062 273 VGAFGGR--------REIMEQLAPLGPVYQAGTLSGNPLAMAAG-LATLK 313 (426)
T ss_pred ceeeeEH--------HHHHHhhccCCCceecccCcCCHHHHHHH-HHHHH
Confidence 9999884 3677777532 11 2346778877777 44443
No 242
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=4e-17 Score=149.06 Aligned_cols=218 Identities=12% Similarity=0.064 Sum_probs=159.1
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~ 153 (343)
....|++.++++- ..+..+++++++.|+..++.+++++||+|+++...|.+....+ +..|.++..++.
T Consensus 63 t~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~ 134 (395)
T PRK08114 63 THFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP 134 (395)
T ss_pred hHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 4467888888865 3568888888999999999999999999999999997776554 556888887753
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc--CcEEEEccCCCccccCCCCCCccccc
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVF 231 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~~~~~~~~~~~~~~~~ 231 (343)
.|.+.+++++++++++|++.+|.||+|.+ .++++|+++|+++ |+++++|.+++.... . ....+
T Consensus 135 -------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v---~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~--~---~pl~~ 199 (395)
T PRK08114 135 -------LIGADIAKLIQPNTKVVFLESPGSITMEV---HDVPAIVAAVRSVNPDAVIMIDNTWAAGVL--F---KALDF 199 (395)
T ss_pred -------CCHHHHHHhcCCCceEEEEECCCCCCCEe---ecHHHHHHHHHHhCCCCEEEEECCCccccc--c---CHHHc
Confidence 36789999999899999999999999999 5688889999998 499999999986321 1 11112
Q ss_pred CCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHH
Q 019298 232 GSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGN 309 (343)
Q Consensus 232 ~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~ 309 (343)
+-.++++|.+|.++.+| ...|.++. + +++.+.++.... .....++...+.+ ..-| ..+--+.+
T Consensus 200 ---GaDivv~S~tKyl~Ghsdv~~G~v~~-~-------~~~~~~l~~~~~~~G~~~~p~~a~l~-~rgl---~TL~lR~~ 264 (395)
T PRK08114 200 ---GIDISIQAGTKYLVGHSDAMIGTAVA-N-------ARCWEQLRENSYLMGQMVDADTAYMT-SRGL---RTLGVRLR 264 (395)
T ss_pred ---CCcEEEEcCcccccCCCcceeEEEEc-C-------HHHHHHHHHHHHhccCCCCHHHHHHH-HcCC---CcHHHHHH
Confidence 23499999999988887 44554443 2 345555554332 2345566655554 2222 11222778
Q ss_pred HHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 310 FLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 310 ~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+..++...+.++|+++|.+. |+.|
T Consensus 265 ~~~~na~~va~~L~~hp~V~~V~yP 289 (395)
T PRK08114 265 QHEESSLKVAEWLAEHPEVARVNHP 289 (395)
T ss_pred HHHHHHHHHHHHHHcCCCEeEEECC
Confidence 88889999999999988776 5554
No 243
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.78 E-value=2.2e-16 Score=145.42 Aligned_cols=253 Identities=21% Similarity=0.228 Sum_probs=174.6
Q ss_pred CCCcHHHHHHHHHHHhcCCCCC----CCCC----CCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHh-
Q 019298 51 FHTTHVATEAVAEALLSEKFNG----YAPT----AGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALL- 120 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~----Y~~~----~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l- 120 (343)
.+.++.+.+++.+.+.+...+. +... .-..++|+.+++++ +.++ ++|++++|++.++..++.++
T Consensus 9 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l------g~~~~~~v~~~~~~t~a~~~~~~~l~ 82 (371)
T PF00266_consen 9 GPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL------GAPPDEEVVFTSNGTEALNAVASSLL 82 (371)
T ss_dssp -B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH------TSSTTEEEEEESSHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc------CCccccccccccccchhhhhhhhccc
Confidence 3578889999988876432111 1111 12247888888888 4567 89999999999999999999
Q ss_pred --cCCCCeEEEeCCCCcchH----HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 121 --SRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 121 --~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
.++|++|++..-.|++.. ...+..|.++..++.+. +..+|++++++.+++++++++++..+|.||...+
T Consensus 83 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~--~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p--- 157 (371)
T PF00266_consen 83 NPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADP--GGSLDLEDLEEALNPDTRLVSISHVENSTGVRNP--- 157 (371)
T ss_dssp HHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGT--TSSCSHHHHHHHHHTTESEEEEESBETTTTBBSS---
T ss_pred cccccccccccccccccccccccccccccchhhhccccccc--cchhhhhhhhhhhccccceEEeecccccccEEee---
Confidence 789999999999997655 34456789999888764 3468999999999999999999999999999965
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
+++|.++|+++|+++++|.+++... .+..+..+ +-.++++|..|.+|.+| +|++.+++ +.+++
T Consensus 158 i~~I~~~~~~~~~~~~vD~~~~~g~----~~id~~~~---~~D~~~~s~~Kl~gp~G--~g~l~v~~--------~~~~~ 220 (371)
T PF00266_consen 158 IEEIAKLAHEYGALLVVDAAQSAGC----VPIDLDEL---GADFLVFSSHKLGGPPG--LGFLYVRP--------EAIER 220 (371)
T ss_dssp HHHHHHHHHHTTSEEEEE-TTTTTT----SS--TTTT---TESEEEEESTSTTSSST--EEEEEEEH--------HHHHH
T ss_pred eceehhhhhccCCceeEechhcccc----cccccccc---ccceeeecccccCCCCc--hhhheehh--------hhhhc
Confidence 6778888999999999999998632 22222222 22389999999545455 79988864 56666
Q ss_pred Hhhhhc---------------------c-ccCcchHHHHHHHhccchhhHHH-HH-HHHHHHHHHHHHHHhhcCCCCcee
Q 019298 275 MKKYFD---------------------I-LGDPATFIQVCIMYGCLSTIMQI-MI-HGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 275 l~~~~~---------------------~-~~~~~~~~~~a~~~~~l~~~~~~-l~-~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
++.... . .+.++.....++ ..+++...+. ++ .+++..+..+.+.+.|.+++++.+
T Consensus 221 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l-~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~ 299 (371)
T PF00266_consen 221 LRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYAL-NEALKLLEEIGIERIRERIRELAEYLREALEELPGIEV 299 (371)
T ss_dssp HHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred cccccccccccccccchhcccccccccccccceeeehhhhH-HHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeE
Confidence 643211 0 012333333333 3333221111 11 678888889999999998887776
Q ss_pred eC
Q 019298 331 FK 332 (343)
Q Consensus 331 ~~ 332 (343)
..
T Consensus 300 ~~ 301 (371)
T PF00266_consen 300 LG 301 (371)
T ss_dssp SS
T ss_pred ee
Confidence 44
No 244
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.78 E-value=6.8e-17 Score=149.04 Aligned_cols=211 Identities=14% Similarity=0.130 Sum_probs=145.9
Q ss_pred CcEEEecChH-HHHHHHHHHhcC---CCCeEEEeCCCCcchHHHHHhcCceeEEeec-CCCCCCCCCHHHHHhhhcC---
Q 019298 101 NDVFVTSGCT-QAIDVAMALLSR---PGANILLPRPGFPIYELSAAFRHIEVRHFDL-LPDKGWEVDLDDIESLADQ--- 172 (343)
Q Consensus 101 ~~i~~~~g~~-~al~~~~~~l~~---~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~~~~--- 172 (343)
+..++++|++ .++.+++.++.. +||.|+++.-+|.+....+...|++++.++. ..++++.+|++++++++++
T Consensus 124 ~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~ 203 (444)
T TIGR03531 124 KSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGP 203 (444)
T ss_pred CEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccC
Confidence 4688888888 688888777652 5899999999999999999999999999986 3456789999999999975
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEEccCccccCCCC
Q 019298 173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPG 251 (343)
Q Consensus 173 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~~~~G 251 (343)
+..++++.+|+ |+.....+++++|.++|++||+++|+|++|+.....-..... ... ..++ .+++.|++|.+..+|
T Consensus 204 kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~-~g~-~~Grad~vv~s~hK~l~~pg 279 (444)
T TIGR03531 204 DNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELIN-KAI-KVGRVDAVVSSTDKNFMVPV 279 (444)
T ss_pred CCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhh-ccc-cccCCCeEEEeCccCCCCCC
Confidence 44566666665 443334489999999999999999999999963211000000 000 1112 477889999998877
Q ss_pred CcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhh-HHHHHHHHHHHHHHHHHHHhhcCC
Q 019298 252 WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTI-MQIMIHGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~-~~~l~~~~~~~~~~~~~~~~L~~~ 325 (343)
. |+++..+ ++++.++++...... ..+...+.+. ..++... ..+.++.++..++++.+.+.|+++
T Consensus 280 ~--Gg~I~~~------d~el~~~i~~~y~g~-~~~s~~~~~~-~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l 344 (444)
T TIGR03531 280 G--GAIIYSF------DENFIQEISKSYPGR-ASASPSLDVL-ITLLSLGSKGYLELLKERKEMYKYLKELLQKL 344 (444)
T ss_pred C--EEEEEEC------CHHHHHHHHHhccCC-CCChHHHHHH-HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 6655432 356778777654322 2333445444 4444432 333447788888888888887764
No 245
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.77 E-value=1.2e-16 Score=146.77 Aligned_cols=258 Identities=17% Similarity=0.099 Sum_probs=157.2
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC-------CCCCCCC------CCCCHHHHHHHHHHHhhhCCCCCCC
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-------KFNGYAP------TAGLPLTRRAIAEYLSRDLPYKLTP 100 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~ 100 (343)
....++|+..+ |.++..+|.+.+++.+++..- ..+..+. ..-..++|+.+|++++ . +
T Consensus 3 ~~~~~~~~s~~---YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~------~-~ 72 (370)
T PRK05937 3 ESLSIDFVTND---FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG------A-P 72 (370)
T ss_pred CCceEEeECCC---ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-C
Confidence 35689999888 456777888888887776542 0111111 1234678888888883 2 2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 174 (343)
+.+++++|. .++..+...+.++||.|++..-.|......++........++ ..|+++|++.++. .+
T Consensus 73 ~~l~~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~ 144 (370)
T PRK05937 73 EAFIVPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGR 144 (370)
T ss_pred eEEEECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCc
Confidence 345556655 555555556667888988888888877776665433333332 2578989888762 34
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 175 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
.++++++++|++|.+.+ +++|.++|+++|+++++|++|+...++.........+.-.+..+.+.||||.+|..|.
T Consensus 145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~-- 219 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGA-- 219 (370)
T ss_pred EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCce--
Confidence 56678899999999976 6778888889999999999999754432211100111111123678999999988873
Q ss_pred EEEEEeCCCCCCCchHHHHHHhhh---hccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC
Q 019298 255 GWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 255 G~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~ 324 (343)
| ++.. +++...+... .......++....++ .+++....+..+ .++++++.++++.+.|..
T Consensus 220 ~-vl~~--------~~~~~~~~~~~~~~~~s~~~~~~~~~a~-~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~ 283 (370)
T PRK05937 220 A-LLSS--------SEVKQDLMLNSPPLRYSTGLPPHLLISI-QVAYDFLSQEGELARKQLFRLKEYFAQKFSS 283 (370)
T ss_pred E-EEcC--------HHHHHHHHHhCCCCeecCCCCHHHHHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC
Confidence 3 3332 2344444321 111233445544433 333321111111 567778888888877764
No 246
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=7.9e-17 Score=149.64 Aligned_cols=226 Identities=16% Similarity=0.079 Sum_probs=154.7
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcCceeEEeecC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLL 154 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~ 154 (343)
...+++.++++.+ .+..++++++++++..++.+++++||+|+++...|.+.. ..+...|++++.++ +
T Consensus 71 ~~~le~~la~l~g--------~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~ 141 (437)
T PRK05613 71 VEALENRIASLEG--------GVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-N 141 (437)
T ss_pred HHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-C
Confidence 4678888888873 245555555568888888888899999999999998763 34466788888886 2
Q ss_pred CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
+ .|++++++++++++++|++.++.||+|.+ .++++|+++|+++|+++|+|.+++.... ..+. .+
T Consensus 142 ~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v---~di~~I~~la~~~gi~livD~t~a~g~~----~~p~-~~--- 205 (437)
T PRK05613 142 P-----DDPESWQAAVQPNTKAFFGETFANPQADV---LDIPAVAEVAHRNQVPLIVDNTIATAAL----VRPL-EL--- 205 (437)
T ss_pred C-----CCHHHHHHhCCccCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCeEEEECCCccccc----cChH-Hh---
Confidence 2 27899999999889999999999999988 5578888889999999999999865321 1111 12
Q ss_pred CCEEEEccCccccCCCCCcEEEEEEeCCCCCCC----------------------------chHHHHHHh--hhhccccC
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR----------------------------KPKVVERMK--KYFDILGD 284 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~----------------------------~~~~~~~l~--~~~~~~~~ 284 (343)
+-.+++.|++|.++..|..+|.+++.++...+. ...+..+.+ ........
T Consensus 206 GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 285 (437)
T PRK05613 206 GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGAT 285 (437)
T ss_pred CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCC
Confidence 224999999999988887777766643321110 000111111 11222345
Q ss_pred cchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 285 PATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 285 ~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
.+++..+.+ ..-| ..+-.+.++..++...+.+.|+.+|.+. ++.|
T Consensus 286 ~~p~~a~l~-~rgl---~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yP 331 (437)
T PRK05613 286 LSPFNAWVT-AQGL---DTLSLRLERHNENAIKVAEFLNNHEKVAKVNFA 331 (437)
T ss_pred CCHHHHHHH-Hccc---CcHHHHHHHHHHHHHHHHHHHHcCCCcceEECC
Confidence 566655555 2221 2222277888889999999999988775 5444
No 247
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.77 E-value=6.2e-17 Score=144.32 Aligned_cols=203 Identities=17% Similarity=0.188 Sum_probs=161.3
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc----CCCC--CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----EKFN--GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+.+.+.|+.+.. .+.++.+.+++...+.. .+.. .|....+..+.|+.+|+++ +.++.+|++|+
T Consensus 41 ~~~~vyld~~at-----~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiFts 109 (428)
T KOG1549|consen 41 GTRPVYLDNQAT-----GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVFTS 109 (428)
T ss_pred CCccEEEecCcC-----CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEEeC
Confidence 667888888873 35678888888877643 2221 2222334678999999999 56888899999
Q ss_pred ChHHHHHHHHHHhc-CCCC----eEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEE
Q 019298 108 GCTQAIDVAMALLS-RPGA----NILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179 (343)
Q Consensus 108 g~~~al~~~~~~l~-~~gd----~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~ 179 (343)
|+|++++++++... ..+| +|++..-.|++....+ +..|+.++++|+. +...+|++.+++.++++++++.+
T Consensus 110 ~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv~I 187 (428)
T KOG1549|consen 110 GATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLVSI 187 (428)
T ss_pred CchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEEEE
Confidence 99999999999974 3455 8999888887765544 5568999999887 45568999999999999999999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
...+|.+|+.+| +++|+++|+++++.+++|.|++- |.-+..+..++.+ ++..|.+|.||.+| +|++.+
T Consensus 188 ~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaLYv 255 (428)
T KOG1549|consen 188 MHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGALYV 255 (428)
T ss_pred EecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEEEE
Confidence 999999999955 68888899999999999999997 4444455555544 88889999999999 898888
Q ss_pred eC
Q 019298 260 TD 261 (343)
Q Consensus 260 ~~ 261 (343)
..
T Consensus 256 r~ 257 (428)
T KOG1549|consen 256 RR 257 (428)
T ss_pred cc
Confidence 63
No 248
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.77 E-value=1.5e-16 Score=147.26 Aligned_cols=269 Identities=16% Similarity=0.093 Sum_probs=173.0
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|.-. ..++ .+|.+.++++++++... .+... ...+....+++.+....+ ..+.+++++++++
T Consensus 38 dG~~ylD~~~g~~~--~~lGh~~p~v~~ai~~q~~~~~--~~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGse 109 (408)
T PRK04612 38 QGREYLDLAAGIAV--CGLGHNDPDLVAALTEQAGKLW--HTSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTE 109 (408)
T ss_pred CCCEEEEcCccHhh--ccCCCCCHHHHHHHHHHHHhcc--ccccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHH
Confidence 38899999888633 1233 78999999999987532 11111 122344455565543221 1279999999999
Q ss_pred HHHHHHHHhcC----C-----CCeEEEeCCCCcchHHHHHhc-CceeEE--e-ecCCC--CCCCCCHHHHHhhhcCCceE
Q 019298 112 AIDVAMALLSR----P-----GANILLPRPGFPIYELSAAFR-HIEVRH--F-DLLPD--KGWEVDLDDIESLADQNTVA 176 (343)
Q Consensus 112 al~~~~~~l~~----~-----gd~vl~~~p~~~~~~~~~~~~-g~~~~~--~-~~~~~--~~~~~d~~~l~~~~~~~~~~ 176 (343)
|++.+++.... . ..+|+....+|++....+... +..... + +..+. .-.-.|++.+++.+..+..+
T Consensus 110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a 189 (408)
T PRK04612 110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVA 189 (408)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEE
Confidence 99999987531 1 246888888888765444332 211100 0 00000 00012788899888766778
Q ss_pred EEEeCCCCCcccccC--HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 177 LVIINPGNPCGNVYS--YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 177 i~~~~p~nptG~~~~--~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
+++..|.+++|-+++ .+.+++|.++|++||+++|+||+|.++...+... . ....+.+..+.+|||.++ +|+|+
T Consensus 190 avi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-a---~~~~~~~pdi~t~~K~l~-~G~pi 264 (408)
T PRK04612 190 AVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF-A---HWQEQVTPDIVTLAKALG-GGFPI 264 (408)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh-h---hhhcCCCCCEEEEcchhc-CCCce
Confidence 888999887776655 6789999999999999999999999876654321 1 112234467789999986 78999
Q ss_pred EEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298 255 GWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 255 G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~ 324 (343)
||+++++ ++.+.+... ...+++.+++.++++ .+.|+...+ .+..++++++.+.+.+.|++
T Consensus 265 ga~~~~~--------~~~~~~~~~~~~~t~~~~p~~~aaa-~a~L~~~~~-~~l~~~~~~~g~~l~~~l~~ 325 (408)
T PRK04612 265 GAMLAGP--------KVAETMQFGAHGTTFGGNPLAAAVA-RVALRKLAS-PQIAANVARQSAALRAGLEA 325 (408)
T ss_pred EEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHHHH
Confidence 9999853 566666543 233556788888888 455432211 12566666666666666654
No 249
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.77 E-value=1.4e-16 Score=148.40 Aligned_cols=288 Identities=16% Similarity=0.121 Sum_probs=178.4
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
+++.++|+..|.-... .-..+|.+.+++++++++.....+.. ...+....+++.+..... .-..+.+++++++++|
T Consensus 38 dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGseA 113 (421)
T PRK06777 38 EGREYIDFAAGIAVLN-TGHRHPKVVAAVRQQLDQFTHTAYQI--VPYASYVTLAERINALAP-IDGPAKTAFFTTGAEA 113 (421)
T ss_pred CCCEEEEcccCHHhhc-cCCCCHHHHHHHHHHHhhcccccccc--cCChHHHHHHHHHHHhCC-CCCCceEEEeCCcHHH
Confidence 3888999988763311 12268899999999987643222211 112233344444433211 0124689999999999
Q ss_pred HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Cce--e-----------EEeecCCCCCCC----CCHHHHHhhhcC
Q 019298 113 IDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HIE--V-----------RHFDLLPDKGWE----VDLDDIESLADQ 172 (343)
Q Consensus 113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~~--~-----------~~~~~~~~~~~~----~d~~~l~~~~~~ 172 (343)
++.+++.... ...+|+..+-+|++....+... +.. . ..++. ++.... -+++.+++.+..
T Consensus 114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~~~ 192 (421)
T PRK06777 114 VENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALY-PNELHGVSVEEALSSVERLFKA 192 (421)
T ss_pred HHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCC-CccccCcCHHHHHHHHHHHHHh
Confidence 9999887531 2357888888887765544432 210 0 11111 100001 125567776642
Q ss_pred ----CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc
Q 019298 173 ----NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR 246 (343)
Q Consensus 173 ----~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 246 (343)
+..+.++..| .+..|. +++.+.+++|.++|++||+++|+||+|.++.+.+.. .....++....++ ++||.
T Consensus 193 ~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~~~~pDiv---~~sK~ 268 (421)
T PRK06777 193 DIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYYDVKPDLI---TMAKS 268 (421)
T ss_pred ccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhcCCCCCEE---eeehh
Confidence 2334455556 677886 578999999999999999999999999998666542 2223333222322 69999
Q ss_pred cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC-
Q 019298 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL- 324 (343)
Q Consensus 247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~- 324 (343)
++ +|+|+||++++. ++++.+.... ..+++.++++++++ .+.|+...+ -+..++++++.+.+.+.|++
T Consensus 269 l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa-~a~L~~~~~-~~l~~~~~~~g~~l~~~L~~l 337 (421)
T PRK06777 269 LG-GGMPISAVVGRA--------EVMDAPAPGGLGGTYAGNPLAVAAA-LAVLDVIAE-EKLCQRALILGAHLVEVLEKA 337 (421)
T ss_pred hc-CCCceEEEEEcH--------HHHhccCCCCCCCCCCcCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHHHHH
Confidence 98 899999999853 5666665432 23567788888888 565542211 12666777777777777765
Q ss_pred ---CCCceeeCCCCceEee
Q 019298 325 ---IPELINFKSTGSSLKY 340 (343)
Q Consensus 325 ---~~g~~~~~~~~g~~~~ 340 (343)
.|.+....+.|.+|.+
T Consensus 338 ~~~~~~i~~vrg~G~~~~i 356 (421)
T PRK06777 338 KASCPAIVDIRARGSMVAV 356 (421)
T ss_pred HHhCCCeEEecCceEEEEE
Confidence 3444445788888764
No 250
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.76 E-value=2.1e-16 Score=147.37 Aligned_cols=287 Identities=14% Similarity=0.082 Sum_probs=166.4
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|.-.. .++ .+|.+.+++++++.+.....+.. ...+.+..+++.+.+... ....+.+++++++++
T Consensus 31 dG~~ylD~~~g~~~~--~lGh~~p~v~~a~~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGse 105 (420)
T TIGR00700 31 DGNRLIDFASGIAVL--NIGHSHPRVVDAVRTQVAEFTHTCFMV--TPYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAE 105 (420)
T ss_pred CCCEEEECccCHHhc--cCCCCCHHHHHHHHHHHHhccCccccc--cCChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHH
Confidence 388999998886332 233 68999999999987643222211 112223344444433111 112368999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCC---------CCCCCHHHH
Q 019298 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDK---------GWEVDLDDI 166 (343)
Q Consensus 112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~---------~~~~d~~~l 166 (343)
|++.+++... ....+|+...-+|++....+... +. .+..++..... .+.-+++.+
T Consensus 106 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (420)
T TIGR00700 106 AVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAA 185 (420)
T ss_pred HHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHH
Confidence 9999988753 12357888888887765443332 11 01111111000 000014566
Q ss_pred Hhhhc----CCceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298 167 ESLAD----QNTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (343)
Q Consensus 167 ~~~~~----~~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (343)
++.+. .+..+.++..| ..-+|..+ +.+.+++|.++|++||+++|+||+|.++.+.+. ...+..++.... +
T Consensus 186 ~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~-~~a~~~~~~~pD---i 261 (420)
T TIGR00700 186 RAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGA-MFACEHEGPEPD---L 261 (420)
T ss_pred HHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccch-hHHHhhcCCCCC---E
Confidence 66542 23334455566 66778876 455699999999999999999999999876653 212222222222 3
Q ss_pred ccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHH
Q 019298 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGS 317 (343)
Q Consensus 241 ~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~ 317 (343)
.++||.++ +|+|+||++++. ++.+.+... ...+.+.++++++++ .+.|+- ... ..+++++..+.
T Consensus 262 ~~lsK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa-~a~l~~l~~~~---~~~~~~~~g~~ 328 (420)
T TIGR00700 262 ITTAKSLA-DGLPLSGVTGRA--------EIMDAPAPGGLGGTYAGNPLACAAA-LAVLAIIESEG---LIERARQIGRL 328 (420)
T ss_pred EEeecccc-CCcceEEEEecH--------HHHhhcCCCCcCCCCCcCHHHHHHH-HHHHHHHHhcc---HHHHHHHHHHH
Confidence 45999987 899999999853 677766533 233567788888887 444421 112 33333333333
Q ss_pred HHHhh----cCCCCceeeCCCCceEeeec
Q 019298 318 CVPSY----KLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 318 ~~~~L----~~~~g~~~~~~~~g~~~~~~ 342 (343)
+.+.| ..+|.+....+. |.++|+.
T Consensus 329 l~~~L~~l~~~~~~~~~vrg~-G~~~~i~ 356 (420)
T TIGR00700 329 VTDRLTTLKAVDPRIGDVRGL-GAMIAVE 356 (420)
T ss_pred HHHHHHHHHhhCCCEEEeecc-ceEEEEE
Confidence 33333 334444433455 6666664
No 251
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.76 E-value=5.1e-16 Score=144.28 Aligned_cols=277 Identities=14% Similarity=0.078 Sum_probs=173.3
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++++.+||..+.... +.--.+|++.++++++++... ...........++.+.+++++ ..+.+++++++++
T Consensus 35 ~g~~~lD~~s~~~~~-~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~ 105 (401)
T TIGR01885 35 EGKRYLDFLSAYSAV-NQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF--------GYDKVLPMNTGAE 105 (401)
T ss_pred CCCEEEEcccCHhhc-cCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc--------CCCEEEEeCccHH
Confidence 378889998875331 111258999999999886432 111001122345555555554 2468999999999
Q ss_pred HHHHHHHHhc----------CCCCeEEEeCCCCcch-HHHHHhcCc------------eeEEeecCCCCCCCCCHHHHHh
Q 019298 112 AIDVAMALLS----------RPGANILLPRPGFPIY-ELSAAFRHI------------EVRHFDLLPDKGWEVDLDDIES 168 (343)
Q Consensus 112 al~~~~~~l~----------~~gd~vl~~~p~~~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~d~~~l~~ 168 (343)
++..+++.+. ...++|+..+-+|.+. .......+. .+..++. .|++.+++
T Consensus 106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~ 178 (401)
T TIGR01885 106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEE 178 (401)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHH
Confidence 9999998852 1236788888887653 333332221 1111211 26888888
Q ss_pred hhc---CCceEEEEeCCCCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCc
Q 019298 169 LAD---QNTVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244 (343)
Q Consensus 169 ~~~---~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 244 (343)
.++ ++..++++..+++++|...+ .+.+++|.++|++||+++|+||+|.++.+.+... ........++ ++ ++|
T Consensus 179 ~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~d-i~--~~g 254 (401)
T TIGR01885 179 ALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPD-IV--LLG 254 (401)
T ss_pred HHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCC-EE--Eee
Confidence 774 34456666666899999986 4579999999999999999999998766555321 1111111122 33 467
Q ss_pred cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 019298 245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYK 323 (343)
Q Consensus 245 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~ 323 (343)
|.++..++|+|+++++ +++++.++.. ...+.+.+++.+.++ .++|+...+ ....++++++.+.+.+.|+
T Consensus 255 K~l~~g~~~ig~v~~~--------~~i~~~~~~~~~~~t~~~~p~~~~aa-~a~L~~i~~-~~l~~~~~~~~~~~~~~L~ 324 (401)
T TIGR01885 255 KALSGGVYPVSAVLAD--------DDVMLTIKPGEHGSTYGGNPLACAVA-VAALEVLEE-EKLAENAEKLGEIFRDQLK 324 (401)
T ss_pred ccccCCCCCcEEEEEc--------HHHHhhccCCCCCCCCCCCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHHH
Confidence 9998777999999985 3677776543 223445577777777 555543211 0255677777888888888
Q ss_pred CCC-Cc-eeeCCCCceEe
Q 019298 324 LIP-EL-INFKSTGSSLK 339 (343)
Q Consensus 324 ~~~-g~-~~~~~~~g~~~ 339 (343)
+++ ++ ....+.|.++.
T Consensus 325 ~l~~~~~~~~~g~g~~~~ 342 (401)
T TIGR01885 325 KLPKPIITEVRGRGLLNA 342 (401)
T ss_pred hccCCceeEEeecCeeEE
Confidence 762 22 12245565554
No 252
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.75 E-value=7.3e-16 Score=140.88 Aligned_cols=243 Identities=16% Similarity=0.102 Sum_probs=162.8
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH-HHhcCceeEE
Q 019298 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-AAFRHIEVRH 150 (343)
Q Consensus 72 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~-~~~~g~~~~~ 150 (343)
.|........|++.+++++ ..++++.+++++.++++++...+++||.| +..+|...... ....|.....
T Consensus 73 ~Yagd~s~~~LE~~vAe~l--------G~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvD 142 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY--------GFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVD 142 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEe
Confidence 4887778899999999999 45689999999999998877678899975 44444333333 5666775443
Q ss_pred eecC--------CCCCCCCCHHHHHhhhcCC----ceEEEEeCCCCCc-ccccCHHHHHHHHHHHhhcCcEEEEccCCCc
Q 019298 151 FDLL--------PDKGWEVDLDDIESLADQN----TVALVIINPGNPC-GNVYSYQHLQKLAETANKLKTLVIADEVYGH 217 (343)
Q Consensus 151 ~~~~--------~~~~~~~d~~~l~~~~~~~----~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~ 217 (343)
+..+ ....+.+|++++++++++. ++++.+.+++|.. |+..|.++++++.++|++||+.+|+|.+...
T Consensus 143 i~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~ 222 (460)
T PRK13237 143 IIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCV 222 (460)
T ss_pred eecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchh
Confidence 3211 2245789999999998753 3356777888887 7999999999999999999999999999874
Q ss_pred c----c------cCCCCCC----cccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc--
Q 019298 218 L----V------FGDKPFV----PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-- 281 (343)
Q Consensus 218 ~----~------~~~~~~~----~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-- 281 (343)
- . +.+.+.. .+.++. .+++.|++|.++.+- -|++++.+ +++.++++...-.
T Consensus 223 gna~fI~~re~~y~~~~i~ei~~e~~s~a----D~~t~S~~K~~~~~~--GG~i~t~D-------~eL~~~~r~~~~~~e 289 (460)
T PRK13237 223 ENAYFIKEREEGYQDKSIKEIVHEMFSYA----DGCTMSGKKDCLVNI--GGFLAMND-------EELFDEAKELVVVYE 289 (460)
T ss_pred cChhhhcccccccCCCcHhHHhhhccCcC----cEEEEeCCCCCCCCC--ceEEEECC-------HHHHHHHHHhccccC
Confidence 3 1 1111110 011222 378889999977652 37777653 5788888877311
Q ss_pred ----ccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 282 ----LGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 282 ----~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
++..+.--..++..++ .++++ ..+..-+..++|.+.|.+. |+++..|.||.-+|+|
T Consensus 290 G~~tygg~~grd~~alAvgl----~E~~~~~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v~vd 351 (460)
T PRK13237 290 GMPSYGGMAGRDMEAMAIGI----EESVQYEYIEHRVGQVRYLGEKLLAA-GVPIVEPVGGHAVFLD 351 (460)
T ss_pred CCcCCCChhhhHHHHHHhHH----HhhchHHHHHHHHHHHHHHHHHHHHC-CCceecCCCceEEEEE
Confidence 1122221223331222 22222 3333334556677777776 8998899999999886
No 253
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.75 E-value=4.9e-16 Score=146.08 Aligned_cols=284 Identities=13% Similarity=0.112 Sum_probs=169.5
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~ 111 (343)
+++++||..|.-.. .++ .+|.+.++++++++....... .....+.+..+++.+..... -.. +.+++++++++
T Consensus 53 G~~ylD~~~g~~~~--~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~L~~~~p--~~~~~~v~f~~sGse 126 (451)
T PRK06918 53 GNQYIDFAGAIGTI--NVGHSHPKVKEALHKQVDQYIHTGF--NVMMYEPYIELAEKLAALAP--GSFDKKVLFLNSGAE 126 (451)
T ss_pred CCEEEEcCCchhhc--CCCCCCHHHHHHHHHHHHhccCccc--cccccHHHHHHHHHHHHhCC--CCCCCEEEEcCCcHH
Confidence 88899998886332 233 789999999999875321111 11122344555555543221 112 58999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCce--------------eEEeecCCC--CCCCCC--------HHH
Q 019298 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIE--------------VRHFDLLPD--KGWEVD--------LDD 165 (343)
Q Consensus 112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~--------------~~~~~~~~~--~~~~~d--------~~~ 165 (343)
|.+.+++... ....+|+....+|++....+...... +..++.... ...+.. ++.
T Consensus 127 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (451)
T PRK06918 127 AVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEE 206 (451)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHH
Confidence 9999988753 12357888888887765544332110 111111100 000110 123
Q ss_pred HHhhh----cCCceEEEEeCCCC-Cccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298 166 IESLA----DQNTVALVIINPGN-PCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (343)
Q Consensus 166 l~~~~----~~~~~~i~~~~p~n-ptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 239 (343)
+++.+ ..+..+.++..|-. -.|.++ +.+.+++|.++|++||+++|+||+|.++.+.+.. .++..++....
T Consensus 207 ~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~-~a~~~~~v~pD--- 282 (451)
T PRK06918 207 FKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY-FAIEHFDVVPD--- 282 (451)
T ss_pred HHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce-ehhHhcCCCCC---
Confidence 33332 22445667777843 446644 5566999999999999999999999998776542 23333332222
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHH---HHHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMI---HGNFLENFA 315 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~---~~~~~~~~~ 315 (343)
+.|+||.++ +|+|+||++++. ++.+.+.... ..+++.+++.+.++ .+.|+ +++ ..+++++..
T Consensus 283 i~t~sK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~g~~l~~aaa-~a~l~----~i~~~~~~~~~~~~g 348 (451)
T PRK06918 283 LITVSKSLG-AGVPISGVIGRK--------EIMDESAPGELGGTYAGSPLGCAAA-LAVLD----IIEKENLNDRAIELG 348 (451)
T ss_pred EEeeehhhc-CCCccEEEEEcH--------HHHhccCCCCcCcCCCcCHHHHHHH-HHHHH----HHHHCCHHHHHHHHH
Confidence 448999987 899999999853 5777665432 34567888888886 44432 221 344444444
Q ss_pred HHHHHhhcC----CCCceeeCCCCceEeee
Q 019298 316 GSCVPSYKL----IPELINFKSTGSSLKYL 341 (343)
Q Consensus 316 ~~~~~~L~~----~~g~~~~~~~~g~~~~~ 341 (343)
+.+.+.|+. +|.+..+.+.|+++.|.
T Consensus 349 ~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~ 378 (451)
T PRK06918 349 KVVMNRFEEMKNKYNCIGDVRGLGAMCAFE 378 (451)
T ss_pred HHHHHHHHHHHhhCCCceeeccceeEEEEE
Confidence 554444433 33333346678888764
No 254
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=6.9e-16 Score=144.26 Aligned_cols=269 Identities=14% Similarity=0.110 Sum_probs=161.6
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|.-. ..++ .+|.+.+++++++..... +.......+.+..+|+.+.... +..-+.+++++++++
T Consensus 39 dG~~ylD~~~g~~~--~~lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~--p~~~~~v~f~~sGsE 112 (443)
T PRK08360 39 EGNEYIDFLSDAAV--QNVGHNNPRVVKAIKEQTDKLIH--YTPIYGFPVEPLLLAEKLIEIA--PGDNPKVSFGLSGSD 112 (443)
T ss_pred CCCEEEEccccHhh--cccCCCCHHHHHHHHHHHHhccC--ccccccCcHHHHHHHHHHHHhC--CCCCCEEEEcCCHHH
Confidence 38889999888533 2233 789999999999875321 2111122344455555554422 222368999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHh-cCce------------eEEeecCCCC--CCC--------CCHHHH
Q 019298 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAF-RHIE------------VRHFDLLPDK--GWE--------VDLDDI 166 (343)
Q Consensus 112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~~--~~~--------~d~~~l 166 (343)
|++.+++... .....|+...-+|++....+.. .+.. +..++..... .+. -+++.+
T Consensus 113 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (443)
T PRK08360 113 ANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYI 192 (443)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHH
Confidence 9999998753 1235788877778765432222 2211 1222211100 000 123445
Q ss_pred Hhhhc-----CCceEEEEeCC-CCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298 167 ESLAD-----QNTVALVIINP-GNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (343)
Q Consensus 167 ~~~~~-----~~~~~i~~~~p-~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 239 (343)
++.+. +++.+ ++..| +||+|.+++ .+.++++.++|++||+++|+||+|.++.+.+... ....++..++++
T Consensus 193 ~~~l~~~~~~~~iAA-vi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDii- 269 (443)
T PRK08360 193 KEKFEGEVYAEGVAA-LFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDII- 269 (443)
T ss_pred HHHHHhccCCCCeEE-EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCEE-
Confidence 55553 23444 44557 699999887 5579999999999999999999999886655421 212222223333
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSC 318 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~ 318 (343)
++||+++ +|+|+||++++ +++.+.+.... ..+.+.++..++++ .+.|+...+- +..++++++-+.+
T Consensus 270 --tlsK~l~-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~~p~~~aaa-~a~l~~l~~~-~l~~~~~~~g~~l 336 (443)
T PRK08360 270 --TLGKPLG-GGLPISATIGR--------AEIMDSLPPLAHAFTLSGNPVASAAA-LAVIEEIEEK-NLLKRAEKLGNYT 336 (443)
T ss_pred --Eeccccc-CCceeEEEEEc--------HHHHhhhcCCCCCCCCCcCHHHHHHH-HHHHHHHHHc-CHHHHHHHHHHHH
Confidence 6799988 89999999985 36777776442 33556778877777 4444321110 1445555555555
Q ss_pred HHhhc
Q 019298 319 VPSYK 323 (343)
Q Consensus 319 ~~~L~ 323 (343)
.+.|+
T Consensus 337 ~~~L~ 341 (443)
T PRK08360 337 KKRLE 341 (443)
T ss_pred HHHHH
Confidence 55443
No 255
>PLN02624 ornithine-delta-aminotransferase
Probab=99.74 E-value=3.5e-16 Score=147.59 Aligned_cols=243 Identities=16% Similarity=0.086 Sum_probs=152.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG-YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
+++++||..|.-.. +.--.+|.+.+++++++....... +-......+|.+.+++++ ..+.++++++++++
T Consensus 74 G~~ylD~~sg~~~~-~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~--------~~~~~~f~~SGseA 144 (474)
T PLN02624 74 GKKYLDFLSAYSAV-NQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF--------GYDMVLPMNTGAEG 144 (474)
T ss_pred CCEEEEcccchhcc-cCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc--------CCCeEEEeCChHHH
Confidence 77889998875331 112268999999999987632211 111123345556666554 24689999999999
Q ss_pred HHHHHHHhcC---------CC-CeEEEeCCCCcchHHHHHhcCceeE-Ee---ecCCC---CCCCCCHHHHHhhhc---C
Q 019298 113 IDVAMALLSR---------PG-ANILLPRPGFPIYELSAAFRHIEVR-HF---DLLPD---KGWEVDLDDIESLAD---Q 172 (343)
Q Consensus 113 l~~~~~~l~~---------~g-d~vl~~~p~~~~~~~~~~~~g~~~~-~~---~~~~~---~~~~~d~~~l~~~~~---~ 172 (343)
+..+++.... ++ .+|+...-+|.+....+.....+.. .- +..+. -.+ -|++.+++.++ +
T Consensus 145 ~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~ 223 (474)
T PLN02624 145 VETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEEDGD 223 (474)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHhCCC
Confidence 9999975532 12 3577777788766443333221110 00 00000 000 26788888775 2
Q ss_pred CceEEEEeCCCCCcccccCHH-HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC
Q 019298 173 NTVALVIINPGNPCGNVYSYQ-HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (343)
Q Consensus 173 ~~~~i~~~~p~nptG~~~~~~-~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G 251 (343)
+..++++..++|++|.+++.+ .+++|.++|++||+++|+||+|.++...+... .....+.... + .++||.++..+
T Consensus 224 ~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~-a~~~~~i~pD-i--v~lsK~lggG~ 299 (474)
T PLN02624 224 RIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKML-ACDWEEVRPD-V--VILGKALGGGV 299 (474)
T ss_pred CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchh-hHHhcCCCCC-E--EEecccccCCC
Confidence 456677777799999998766 59999999999999999999999875554321 1111111122 2 23689999888
Q ss_pred CcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccch
Q 019298 252 WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLS 299 (343)
Q Consensus 252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~ 299 (343)
+++|+++++. ++...+..... .+++.+++.++++ .+.|+
T Consensus 300 ~pigav~~~~--------~i~~~~~~~~~~~T~~g~pl~~aaa-~aaLe 339 (474)
T PLN02624 300 IPVSAVLADK--------DVMLCIKPGEHGSTFGGNPLASAVA-MAALQ 339 (474)
T ss_pred CcceeeeecH--------HHHhHhccCCcCCCCCCCHHHHHHH-HHHHH
Confidence 9999999853 56665543332 2446778887777 44443
No 256
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.74 E-value=8.4e-16 Score=138.55 Aligned_cols=221 Identities=19% Similarity=0.138 Sum_probs=163.8
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~ 152 (343)
+....|.++++++- ..+..+.+++++.||..++..++++||+|++++..|++....+ +..|.++.+++
T Consensus 63 PT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d 134 (396)
T COG0626 63 PTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVD 134 (396)
T ss_pred ccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEEC
Confidence 34567888888776 4678999999999999999999999999999999998765544 45577777664
Q ss_pred cCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc
Q 019298 153 LLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~ 231 (343)
. -+.+++++++. +++++|++.+|.||+-.+ .++.+|+++++++|+++|+|+.+...++..+ + .+
T Consensus 135 ~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~q~P----L-~~ 199 (396)
T COG0626 135 P-------GDDEALEAAIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVLQRP----L-EL 199 (396)
T ss_pred C-------CChHHHHHHhcccCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCcccccccCh----h-hc
Confidence 2 24566676676 489999999999999888 7889999999999999999999987443211 1 12
Q ss_pred CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh--ccccCcchHHHHHHHhccchhhHHHHHHHH
Q 019298 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQVCIMYGCLSTIMQIMIHGN 309 (343)
Q Consensus 232 ~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~ 309 (343)
+-.|++.|.+|.+++.+-=+|-++..+ +.++.+.+.... ......+++..+.+..+ | ..+--+.+
T Consensus 200 ---GaDIVvhSaTKyl~GHsDvl~G~v~~~------~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRG-l---kTL~~Rm~ 266 (396)
T COG0626 200 ---GADIVVHSATKYLGGHSDVLGGVVLTP------NEELYELLFFAQRANTGAVLSPFDAWLLLRG-L---RTLALRME 266 (396)
T ss_pred ---CCCEEEEeccccccCCcceeeeEEecC------hHHHHHHHHHHHHhhcCCCCCHHHHHHHHhc-c---chHHHHHH
Confidence 234999999999999886666655533 235666653332 23456677766555122 1 22223888
Q ss_pred HHHHHHHHHHHhhcCCCCce-eeCC
Q 019298 310 FLENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 310 ~~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+..++...+.++|++.|.+. ++.|
T Consensus 267 ~~~~nA~~IA~~L~~~p~V~~V~yP 291 (396)
T COG0626 267 RHNENALKIAEFLADHPKVKKVYYP 291 (396)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECC
Confidence 88899999999999988887 6666
No 257
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.74 E-value=3.2e-15 Score=139.09 Aligned_cols=265 Identities=13% Similarity=0.070 Sum_probs=162.1
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--C----CCCCHHHHH----HHHHHHhhhCCCCCCCCcE
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA--P----TAGLPLTRR----AIAEYLSRDLPYKLTPNDV 103 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~----~~g~~~lr~----~ia~~~~~~~~~~~~~~~i 103 (343)
..+.++|--.+. ..+|.+++++...+.+....+|+ . .....+|++ .++++++ .+..
T Consensus 27 ~~~~~~l~~sen------~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g--------~~~a 92 (416)
T PRK13034 27 QQDHLELIASEN------FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFG--------CDYA 92 (416)
T ss_pred HhcCeeeccccc------CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhC--------CCce
Confidence 456677776662 35899999988885221111111 1 123456777 7777773 3455
Q ss_pred -EEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc-hHHHHHh--cCcee--EEeecCCCCCCCCCHHHHHhhhcC-CceE
Q 019298 104 -FVTSGCTQAIDVAMALLSRPGANILLPRPGFPI-YELSAAF--RHIEV--RHFDLLPDKGWEVDLDDIESLADQ-NTVA 176 (343)
Q Consensus 104 -~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~-~~~~~~~--~g~~~--~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ 176 (343)
+.+++++.|+..++.+++++||+|+++..+|.+ +...++. .+... ..++.++ .++.+|++++++.++. ++++
T Consensus 93 lv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~d~~~le~~l~~~~~kl 171 (416)
T PRK13034 93 NVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDR-LTGLIDYDEVEELAKEHKPKL 171 (416)
T ss_pred EEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccccc-ccCCcCHHHHHHHHhhcCCeE
Confidence 446788999999999999999999999999976 2222221 12112 2333322 2456899999988743 5677
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (343)
Q Consensus 177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 256 (343)
|++..+. +|.. .++.+|.++|+++|+++|+|++++...+..... ...+. .-.++++|++|+++.+. .|+
T Consensus 172 Vi~~~~~--~g~~---~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~--~~~~~--~~Di~~~s~~K~l~g~~--GG~ 240 (416)
T PRK13034 172 IIAGFSA--YPRE---LDFARFREIADEVGALLMVDMAHIAGLVAAGEH--PNPFP--HAHVVTTTTHKTLRGPR--GGM 240 (416)
T ss_pred EEECCCc--cccc---cCHHHHHHHHHHcCCEEEEeCcccccCcccCCC--CCCCC--CceEEEEeCcccCCCCC--CeE
Confidence 7665554 3555 467788888999999999999998755442211 11111 23489999999974332 377
Q ss_pred EEEeCCCCCCCchHHHHHHhhhhccc--cCcchHHHHHHHhccchhh-HHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298 257 FVTTDPCGMFRKPKVVERMKKYFDIL--GDPATFIQVCIMYGCLSTI-MQIMIHGNFLENFAGSCVPSYKLIPELINFK 332 (343)
Q Consensus 257 i~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~a~~~~~l~~~-~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~ 332 (343)
+++++ +.+...++...... ....+...+++..+++... .++.+.++++.++.+++.+.|.++ |+.+..
T Consensus 241 v~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~ 311 (416)
T PRK13034 241 ILTND-------EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVS 311 (416)
T ss_pred EEECc-------HHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEecc
Confidence 77643 23445555433211 1233333333322333221 122235789999999999999888 887643
No 258
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.73 E-value=8e-16 Score=140.60 Aligned_cols=218 Identities=12% Similarity=0.027 Sum_probs=148.7
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~ 152 (343)
+...+|++.++++. ..+..+++++++.||..++.+++++||+|+++.+.|.... ..+...|.+++.++
T Consensus 64 P~~~~lE~~la~le--------g~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd 135 (384)
T PRK06434 64 PTVQAFEEKYAVLE--------NAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID 135 (384)
T ss_pred hhHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence 34577888888887 3467788888899999999999999999999988776544 45566799999887
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
.++.+.+.++ .+++++|++.+|.|||+.+ .++++|+++|++++ +++|.+++... .+. ++.
T Consensus 136 ~~~~~~~~l~--------~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~-~~~---pl~--- 195 (384)
T PRK06434 136 TDRLNSLDFD--------PSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPY-NQN---PLD--- 195 (384)
T ss_pred CCChhheeec--------CCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcc-cCC---chh---
Confidence 6543332222 1257899999999999988 67888899999998 46799975321 111 222
Q ss_pred CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHH
Q 019298 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFL 311 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~ 311 (343)
.+-.++++|.+|.++.+|--+|-+++.+ ++++.++++... ......+++..+.+ ..-|+ .+-.+.++.
T Consensus 196 -~gaDivv~S~tK~i~G~~d~~gG~vv~~------~~~~~~~~~~~~~~~G~~~~~~~A~l~-~~gL~---tL~~R~~r~ 264 (384)
T PRK06434 196 -LGADVVIHSATKYISGHSDVVMGVAGTN------NKSIFNNLVERRKTLGSNPDPIQAYLA-LRGLK---TLGLRMEKH 264 (384)
T ss_pred -cCCCEEEeecccccCCCCCceEEEEecC------cHHHHHHHHHHHHhcCCCCCHHHHHHH-HhCCC---cHHHHHHHH
Confidence 1234999999999888664444444333 235666666543 22334455543333 33332 233366777
Q ss_pred HHHHHHHHHhhcCCCCce-eeCC
Q 019298 312 ENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 312 ~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
+++...+.+.|+.+|.+. |+.|
T Consensus 265 ~~~a~~~a~~L~~~p~v~~V~yP 287 (384)
T PRK06434 265 NKNGMELARFLRDSKKISNVYYP 287 (384)
T ss_pred HHHHHHHHHHHHcCCCccEEECC
Confidence 788888889999888776 5555
No 259
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.73 E-value=1e-15 Score=136.30 Aligned_cols=216 Identities=20% Similarity=0.112 Sum_probs=159.3
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~ 153 (343)
....+.+.+++.. ...++++.+++..|+..++..|+..|+.++....+|......++. .|.....+++
T Consensus 78 t~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 78 TRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred chHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 4467788888777 456799999999999999999999999999999999887665544 4666665543
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
+ +++.+++++.+++++|++.+|.||+..+ .+++++.++|+++|+++++|+.++...+- .+. .++
T Consensus 150 ~-------~~~~~~~~i~~~t~~V~~ESPsNPll~v---~DI~~l~~la~~~g~~vvVDnTf~~p~~~--~pL---~lG- 213 (409)
T KOG0053|consen 150 D-------DLKKILKAIKENTKAVFLESPSNPLLKV---PDIEKLARLAHKYGFLVVVDNTFGSPYNQ--DPL---PLG- 213 (409)
T ss_pred h-------hHHHHHHhhccCceEEEEECCCCCcccc---ccHHHHHHHHhhCCCEEEEeCCcCccccc--Chh---hcC-
Confidence 2 5788888999899999999999999999 67888888888999999999999875322 111 122
Q ss_pred CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE 312 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~ 312 (343)
-.|++.|.+|.++..+--+|-+++.+ .+++.++++..+. ..+..+++..... ..-| ..+--+.++..
T Consensus 214 --ADIV~hSaTKyi~Ghsdvi~G~iv~n------~~~~~~~l~~~~~~lg~~~~p~~~~ll-~Rgl---ktl~lRi~~~~ 281 (409)
T KOG0053|consen 214 --ADIVVHSATKYIGGHSDVIGGSVVLN------SEELASRLKFLQEDLGWCEDPFDLFLL-SRGL---KTLHLRINKHS 281 (409)
T ss_pred --CCEEEEeeeeeecCCcceeeeEEecC------cHHHHHHHHHHHHHhcCCCCHHHHHHH-hcCc---chhhhhHHHHH
Confidence 33999999999999887777776654 2578888888764 3556677655555 1111 11111555556
Q ss_pred HHHHHHHHhhcCCCCce
Q 019298 313 NFAGSCVPSYKLIPELI 329 (343)
Q Consensus 313 ~~~~~~~~~L~~~~g~~ 329 (343)
++.-.+.+.|+..|.++
T Consensus 282 ena~~~A~~Le~~~~v~ 298 (409)
T KOG0053|consen 282 ENALKIALLLEAHPKVK 298 (409)
T ss_pred HHHHHHHHHhhhCCcee
Confidence 66666667777665544
No 260
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.73 E-value=2.3e-16 Score=132.57 Aligned_cols=276 Identities=16% Similarity=0.155 Sum_probs=179.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
-...+||..... .-+..+++++|.++...+.. |+.......|++.+|+.+++ ...+++++|++..+
T Consensus 20 ~~~~vDLRSDTv-----T~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~GK-------EAgLFv~SGTmgNl 85 (384)
T KOG1368|consen 20 THRSVDLRSDTV-----TVPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELFGK-------EAGLFVPSGTMGNL 85 (384)
T ss_pred eeeccccccccc-----cCChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHhCc-------cceeeecccccccH
Confidence 345567766652 34678999999998877655 55555678999999999952 34556666665555
Q ss_pred HHHHHHhcCCCCeEEEeCCCCc-chHH--HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--------CceEEEEeCC
Q 019298 114 DVAMALLSRPGANILLPRPGFP-IYEL--SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--------NTVALVIINP 182 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~-~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~i~~~~p 182 (343)
-.+...+-++|..|++.+-+|- .|+. .....|..+..+ .++++..+++++++++++. .+++|++.|-
T Consensus 86 laIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv--~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT 163 (384)
T KOG1368|consen 86 LAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTV--KNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENT 163 (384)
T ss_pred HHHHHHhcCCCceEEeccchheeehhccChhhhccceeEee--eeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecc
Confidence 5544445569999999988883 3333 334445555544 5566778999999999872 4689999999
Q ss_pred CCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 183 GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 183 ~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
+|-+| .++|.|++.++.++|++||+.+..|.+-..-.--.... ++..+-.... -+--.+||.+|.| +|.+++.+
T Consensus 164 ~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV-~vk~i~~~fD-SVsiCLSKglgAP---VGSViVG~ 238 (384)
T KOG1368|consen 164 HNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGV-PVKKICSAFD-SVSICLSKGLGAP---VGSVIVGS 238 (384)
T ss_pred ccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCC-CHHHHHHhhh-hhhhhhhccCCCC---cccEEEcc
Confidence 76665 99999999999999999999999998865422111111 1111111111 1223689998766 89988865
Q ss_pred CCCCCCchHHHHHHhhhh---ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC-CCce
Q 019298 262 PCGMFRKPKVVERMKKYF---DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS-TGSS 337 (343)
Q Consensus 262 ~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~-~~g~ 337 (343)
.+++++-+.++ ......+....+|+ ..+|+ +-....+.-.++...+.+.++..+++++..| ...+
T Consensus 239 -------k~FI~kA~~~RKalGGGmRQsGvLaaaa-Lval~---~~~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etN 307 (384)
T KOG1368|consen 239 -------KDFIDKARHFRKALGGGMRQSGVLAAAA-LVALD---ENVPLLRADHKRAKELAEYINTPEEIRVEVPAVETN 307 (384)
T ss_pred -------HHHHHHHHHHHHHhcCchhHHHHHHHHH-HHHhh---cchHHHHHHHHHHHHHHHHhccccceeeecchhhcc
Confidence 45777666554 22333344434444 22222 2233445555666677778888766886555 5566
Q ss_pred Eeee
Q 019298 338 LKYL 341 (343)
Q Consensus 338 ~~~~ 341 (343)
++.+
T Consensus 308 iv~~ 311 (384)
T KOG1368|consen 308 IVNM 311 (384)
T ss_pred eeee
Confidence 6664
No 261
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.72 E-value=1.7e-15 Score=140.96 Aligned_cols=284 Identities=15% Similarity=0.103 Sum_probs=170.3
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~ 110 (343)
+++.++|+..|.-.. .++ .+|.+.++++++++.... +.......+....+++.+.... +-. .+.++++++++
T Consensus 38 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~--p~~~~~~v~f~~SGs 111 (425)
T PRK07495 38 EGRRYIDFAAGIAVV--NTGHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALV--PGDFAKKTIFVTTGA 111 (425)
T ss_pred CCCEEEEccccHHhh--ccCCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhC--CCCCCCEEEECCchH
Confidence 388899998886432 133 789999999999875321 1110111233344455444322 111 26899999999
Q ss_pred HHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCCCCCCC----HHHHHhhh
Q 019298 111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGWEVD----LDDIESLA 170 (343)
Q Consensus 111 ~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~d----~~~l~~~~ 170 (343)
+|++.+++... ....+|+...-+|++....+... +. ++..++.... ..+.+ ++.+++.+
T Consensus 112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~l~~~~ 190 (425)
T PRK07495 112 EAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE-LHGVSVEQSLAALDKLF 190 (425)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcc-cccccHHHHHHHHHHHH
Confidence 99999988753 12357888888887764333221 11 1222222111 11122 44456655
Q ss_pred c----CCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCc
Q 019298 171 D----QNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244 (343)
Q Consensus 171 ~----~~~~~i~~~~p-~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 244 (343)
. .+..+.++..| ..-+| ..++.+.+++|.++|++||+++|+||+|.++...+.. ... ...+.+.-+.++|
T Consensus 191 ~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~a~---~~~gv~pDi~tls 266 (425)
T PRK07495 191 KADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-FAM---EHHEVAADLTTMA 266 (425)
T ss_pred HhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-eee---cccCCCCCEEeeh
Confidence 3 23344555556 33378 4579999999999999999999999999987655542 111 2222334567899
Q ss_pred cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH---HHHHHHHHHHHHHH
Q 019298 245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI---HGNFLENFAGSCVP 320 (343)
Q Consensus 245 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~---~~~~~~~~~~~~~~ 320 (343)
|.++ +|+++|+++++. ++.+.+... ...+++.++++++++ .+.++ +++ ..++++++.+.+.+
T Consensus 267 K~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa-~a~l~----~l~~~~l~~~~~~~g~~l~~ 332 (425)
T PRK07495 267 KGLA-GGFPLAAVTGRA--------EIMDAPGPGGLGGTYGGNPLGIAAA-HAVLD----VIEEEDLCERANQLGNRLKQ 332 (425)
T ss_pred hhhc-CCccceEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHH-HHHHH----HHHhchHHHHHHHHHHHHHH
Confidence 9976 789999999853 566665433 223567788888766 44432 222 45555555555555
Q ss_pred hhcC----CCCce-eeCCCCceEeeecC
Q 019298 321 SYKL----IPELI-NFKSTGSSLKYLDL 343 (343)
Q Consensus 321 ~L~~----~~g~~-~~~~~~g~~~~~~l 343 (343)
.|+. +|.+. +... |+++|++|
T Consensus 333 ~L~~l~~~~~~i~~vrG~--Gl~~~iel 358 (425)
T PRK07495 333 RLASLRETVPEIADIRGP--GFMNAVEF 358 (425)
T ss_pred HHHHHHhhCCCeeeeecC--ceEEEEEE
Confidence 5543 34333 3333 88888764
No 262
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.70 E-value=3.2e-15 Score=129.68 Aligned_cols=222 Identities=17% Similarity=0.119 Sum_probs=163.0
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~ 152 (343)
+....|++.|+.+=+ .-.-+.+.+++.|+..++..+.++||.|+...--|++... .++..|.++..++
T Consensus 62 PT~~vlE~RiAaLEG--------G~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd 133 (426)
T COG2873 62 PTTDVLEERIAALEG--------GVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD 133 (426)
T ss_pred chHHHHHHHHHHhhc--------chhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence 346789999987752 2244566777999999999999999999999888876543 5577799998885
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
. -|++.+++++++++|+|++.+-.||.+.+ -++++++++|+++++++|+|..++.-+ -++.+
T Consensus 134 ~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v---~Die~ia~iAh~~gvpliVDNT~atpy-------l~rP~- 195 (426)
T COG2873 134 P-------DDPENFEAAIDENTKAVFAETIGNPGLDV---LDIEAIAEIAHRHGVPLIVDNTFATPY-------LCRPI- 195 (426)
T ss_pred C-------CCHHHHHHHhCcccceEEEEeccCCCccc---cCHHHHHHHHHHcCCcEEEecCCCcce-------ecchh-
Confidence 3 36899999999999999999999999999 567889999999999999999987521 11111
Q ss_pred CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC-------------------------chHHHHHHh--hhhccccCc
Q 019298 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR-------------------------KPKVVERMK--KYFDILGDP 285 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~-------------------------~~~~~~~l~--~~~~~~~~~ 285 (343)
+.+-.|+++|+||..|..|--+|-+++....+.|. ++.++-+.+ -+++.....
T Consensus 196 ~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~l 275 (426)
T COG2873 196 EHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATL 275 (426)
T ss_pred hcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccccc
Confidence 12334999999999999999999999887776663 111111111 123333444
Q ss_pred chHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCce
Q 019298 286 ATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 286 ~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
+|+....+..+ -+-+. +.++..++...+.++|+.+|.+.
T Consensus 276 sPfnAfl~lqG-----lETL~LRmerH~~NA~~vA~~L~~HpkV~ 315 (426)
T COG2873 276 SPFNAFLLLQG-----LETLSLRMERHCENALKVAEFLENHPKVA 315 (426)
T ss_pred CcHHHHHHHhc-----hhhhHHHHHHHHHhHHHHHHHHhcCCCee
Confidence 55544444111 11222 88888999999999999988766
No 263
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.70 E-value=1.2e-14 Score=134.73 Aligned_cols=302 Identities=11% Similarity=0.057 Sum_probs=189.6
Q ss_pred ccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 019298 8 IDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA 87 (343)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia 87 (343)
.++|.+..+.......+...... +......-++.=. .++.|++.+.+...+..... ++.......++.+.+.
T Consensus 15 ~~~p~~~~~~~~~~~~~~~~iyl-d~~a~~~~~~~~t------t~~~p~~~~~~~~~l~~~~~-np~s~~~~~~le~~~~ 86 (431)
T TIGR01788 15 YRMPEEEMPPDAAYQLIHDELSL-DGNPRLNLATFVT------TWMEPEARKLMDETINKNMI-DKDEYPQTAEIENRCV 86 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHhhh-cCCcceeeeeeeC------CCCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHH
Confidence 45666655666666666655432 1111122222211 34567788888888864322 2222233457777777
Q ss_pred HHHhhhCCCCCCCCcEE--EecChHHHHHHHHHHhc--------CC-----CCeEEEeCCCCcchHHHHHhcCceeEEee
Q 019298 88 EYLSRDLPYKLTPNDVF--VTSGCTQAIDVAMALLS--------RP-----GANILLPRPGFPIYELSAAFRHIEVRHFD 152 (343)
Q Consensus 88 ~~~~~~~~~~~~~~~i~--~~~g~~~al~~~~~~l~--------~~-----gd~vl~~~p~~~~~~~~~~~~g~~~~~~~ 152 (343)
+++.+.+|.+-..+++. +|+|+|+++..++.+.. .. ...|++..-.|.++...++..|++++.++
T Consensus 87 ~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~ 166 (431)
T TIGR01788 87 NMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVP 166 (431)
T ss_pred HHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEe
Confidence 88877666431113454 48999999998876542 11 13799999999999999999999999998
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc------CcEEEEccCCCcccc---CCC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL------KTLVIADEVYGHLVF---GDK 223 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~------~~~~i~D~ay~~~~~---~~~ 223 (343)
+++ +++.+|+++|++++++++.+|+++..+|.||.+ +++++|+++|+++ ++++++|.+|+++.. -++
T Consensus 167 ~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~i---dpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~ 242 (431)
T TIGR01788 167 MDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEY---EDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPD 242 (431)
T ss_pred cCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCccc---CCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCC
Confidence 865 345799999999999889999999999999999 7788888999999 999999999996431 111
Q ss_pred CCCcccccCCCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhhh---h-------ccccCcchHHHHH
Q 019298 224 PFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---F-------DILGDPATFIQVC 292 (343)
Q Consensus 224 ~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~---~-------~~~~~~~~~~~~a 292 (343)
....+. ...-..+..|.+|.+ +..| +|.+.+.++.. +...+... . ....+-+......
T Consensus 243 ~~~~~~---~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~------l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~ 311 (431)
T TIGR01788 243 LEWDFR---LPRVKSINVSGHKYGLVYPG--VGWVIWRDEEA------LPEELIFHVNYLGGDEPTFTLNFSRPANQVIA 311 (431)
T ss_pred chhhcC---CCCceEEEECchhccCCCCC--cEEEEEeChHH------cchhheecccccCCCCCCcceecCchHHHHHH
Confidence 111111 112235778999984 4444 78888865321 11221110 0 0011111111111
Q ss_pred HHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 293 IMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 293 ~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
. ...|.. ...+.+..++..+..+++.+.|+++|++++..+
T Consensus 312 ~-w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~ 353 (431)
T TIGR01788 312 Q-YYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISD 353 (431)
T ss_pred H-HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeC
Confidence 1 111111 123333778888889999999999988986554
No 264
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.70 E-value=1.2e-14 Score=135.36 Aligned_cols=194 Identities=15% Similarity=0.103 Sum_probs=130.8
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHH--HHHhhhCCCCCCCCcEEEecC
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAGLPLTRRAIA--EYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia--~~~~~~~~~~~~~~~i~~~~g 108 (343)
+..+.|+.+.. . +.++.+.+++.+.+... ....+....+...+.+.+. +++ +.++++|++++|
T Consensus 26 ~~~iyld~~a~----g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------g~~~~~v~~~~~ 94 (406)
T TIGR01814 26 NAVIYLDGNSL----G-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKLRLV------GAKEDEVVVMNT 94 (406)
T ss_pred CCcEEecCCCc----C-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcccccc------CCCCCcEEEeCC
Confidence 56799997772 2 34788888887766431 1111110011112222222 444 457899999999
Q ss_pred hHHHHHHHHHHhcCCC---CeEEEeCCCCcchH----HHHHhcCcee----EEeecCCCCCCCCCHHHHHhhhc---CCc
Q 019298 109 CTQAIDVAMALLSRPG---ANILLPRPGFPIYE----LSAAFRHIEV----RHFDLLPDKGWEVDLDDIESLAD---QNT 174 (343)
Q Consensus 109 ~~~al~~~~~~l~~~g---d~vl~~~p~~~~~~----~~~~~~g~~~----~~~~~~~~~~~~~d~~~l~~~~~---~~~ 174 (343)
++++++.++.++.+++ +.|++....|+... ..++..|.++ +.++. ++++.+|++.+++.++ +++
T Consensus 95 ~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~~~~~~t 172 (406)
T TIGR01814 95 LTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDTIEKNGDDI 172 (406)
T ss_pred chHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHHHHhcCCCe
Confidence 9999999999886554 36888889998732 2345568776 33433 3345678899988774 578
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC-CCC
Q 019298 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPG 251 (343)
Q Consensus 175 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G 251 (343)
+++++++++|.||...+ +++|+++|+++|+++++|++++... .+..+. ..+-.+++.|.+|.++ .+|
T Consensus 173 ~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~----~~id~~---~~gvD~~~~s~hK~l~g~pG 240 (406)
T TIGR01814 173 AVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGN----VPLDLH---DWGVDFACWCTYKYLNAGPG 240 (406)
T ss_pred EEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccccCC----cccccc---cCCCCEEEEcCccccCCCCC
Confidence 89999999999999964 7888888999999999999998732 222222 2233489999999864 455
No 265
>PRK02769 histidine decarboxylase; Provisional
Probab=99.69 E-value=5.5e-14 Score=128.60 Aligned_cols=236 Identities=15% Similarity=0.117 Sum_probs=158.3
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcE--EEecChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 154 (343)
..++.+.+.+++.+.+|. +++++ ++|+|+|+++..++.... .++++|++++-.|.+....++..|.+...++..
T Consensus 63 ~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~ 140 (380)
T PRK02769 63 SFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL 140 (380)
T ss_pred hHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence 456666666666665554 33444 889999999877665432 467899999999999999999999988888875
Q ss_pred CCCCCCCCHHHHHhhhcCC---ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC---cEEEEccCCCccccCC-CCCCc
Q 019298 155 PDKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLK---TLVIADEVYGHLVFGD-KPFVP 227 (343)
Q Consensus 155 ~~~~~~~d~~~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~---~~~i~D~ay~~~~~~~-~~~~~ 227 (343)
+ ++.+|+++|++.+++. +.+|+++.++|+||.+ +++++|+++|+++| +++++|.+|+.+...- .....
T Consensus 141 ~--~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i---dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~ 215 (380)
T PRK02769 141 P--NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI---DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPP 215 (380)
T ss_pred C--CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCCCceEEEEEecccceeecccCcccc
Confidence 3 4569999999998765 8888889999999999 77888899999998 6999999999854321 11111
Q ss_pred ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh------h--ccccCcchHHHHHHHhccch
Q 019298 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------F--DILGDPATFIQVCIMYGCLS 299 (343)
Q Consensus 228 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~------~--~~~~~~~~~~~~a~~~~~l~ 299 (343)
+. +.. +-..+..|.+|.++. -..+|.+...+ +...++... . ...++.+.....++ .++|.
T Consensus 216 ~d-~~~-~vDsis~s~HK~~~~-P~g~G~l~~r~--------~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~l-w~aL~ 283 (380)
T PRK02769 216 FS-FAD-GIDSIAISGHKFIGS-PMPCGIVLAKK--------KYVERISVDVDYIGSRDQTISGSRNGHTALLL-WAAIR 283 (380)
T ss_pred CC-ccC-CCCEEEECCcccCCC-CCCcEEEEEeh--------hhhhhcccCccccCCCCCCccCCCCcHHHHHH-HHHHH
Confidence 11 111 234778899998652 24478888864 233333111 0 11223333333333 33333
Q ss_pred h--hHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCCC
Q 019298 300 T--IMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKST 334 (343)
Q Consensus 300 ~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~ 334 (343)
. ...+.+..++..+..+++.+.|++. |++ +..|.
T Consensus 284 ~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~ 320 (380)
T PRK02769 284 SLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPN 320 (380)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCC
Confidence 1 1233337788888888888988876 777 44454
No 266
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=8.2e-15 Score=137.34 Aligned_cols=269 Identities=17% Similarity=0.099 Sum_probs=159.6
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCC--CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGY--APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y--~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
++++++|+..|.-.. .++ .+|.+.++++++++....... .......+|.+.+++++ +-..+.+++++++
T Consensus 41 dG~~ylD~~~g~~~~--~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~------~~~~~~v~f~~SG 112 (433)
T PRK08117 41 DGKEYLDFTSGIAVA--NVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEIT------PGGLDCFFFSNSG 112 (433)
T ss_pred CCCEEEECCcchhhc--cCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC------CCCCCEEEEeCcH
Confidence 378899998886332 233 789999999999875321110 11112234445554443 1234689999999
Q ss_pred HHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHh-cCc--e-----------eEEeecCCCC--CCC--------CCH
Q 019298 110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAF-RHI--E-----------VRHFDLLPDK--GWE--------VDL 163 (343)
Q Consensus 110 ~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~-~g~--~-----------~~~~~~~~~~--~~~--------~d~ 163 (343)
++|...+++... ....+|+..+-+|++....+.. .+. . +..++..... ... -++
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (433)
T PRK08117 113 AEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECL 192 (433)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHH
Confidence 999999998642 1235788888888765443321 111 0 1111111000 000 145
Q ss_pred HHHHhhhc----CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCE
Q 019298 164 DDIESLAD----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI 237 (343)
Q Consensus 164 ~~l~~~~~----~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~ 237 (343)
+.+++.+. .+..+.++..| ....|.+ .+.+.++++.++|++||+++|+||+|.++...+.... ...++-.
T Consensus 193 ~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~-~~~~gv~--- 268 (433)
T PRK08117 193 RDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA-AQTFGVV--- 268 (433)
T ss_pred HHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh-HhhcCCC---
Confidence 55666553 23344555666 5666776 5788999999999999999999999998766554221 1112111
Q ss_pred EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHH
Q 019298 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAG 316 (343)
Q Consensus 238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~ 316 (343)
.-+.++||.++ +|+++|+++++ +++.+.+.... ..+.+.++++++++ .+.|+...+ -...++++++.+
T Consensus 269 pDi~t~sK~lg-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~np~~~aaa-~a~L~~l~~-~~l~~~~~~~g~ 337 (433)
T PRK08117 269 PDIMTIAKGIA-SGLPLSAVVAS--------KELMEQWPLGSHGTTFGGNPVACAAA-LATLEVIKE-EKLLDNANEMGA 337 (433)
T ss_pred CCEeehhhhcc-CCCcceeEEEc--------HHHHhhccCCCCCCCCCcCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHH
Confidence 22468999987 79999999885 36766664332 23456788888777 555432100 014555555555
Q ss_pred HHHHhhcC
Q 019298 317 SCVPSYKL 324 (343)
Q Consensus 317 ~~~~~L~~ 324 (343)
.+.+.|+.
T Consensus 338 ~l~~~L~~ 345 (433)
T PRK08117 338 YALERLEV 345 (433)
T ss_pred HHHHHHHH
Confidence 55555543
No 267
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.69 E-value=4e-17 Score=143.38 Aligned_cols=260 Identities=13% Similarity=0.119 Sum_probs=167.7
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCC
Q 019298 53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p 132 (343)
+.|++++++.++...+. .|+......++++.+++++ ..+..+++++++.+..++++.+++|++.|++..+
T Consensus 7 ~~~~m~~a~~~a~~gd~--~Yg~D~~~~~l~~~i~~l~--------g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~ 76 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDD--AYGEDPTTARLEERIAELF--------GKEAALFVPSGTMANQLALRAHLRPGESVICADT 76 (290)
T ss_dssp S-HHEEHHHHHTTSB-C--CTTSSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred CCHHHHHHHHccccCCc--ccCCChhHHHHHHHHHHHc--------CCCEEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence 57889999966554433 5888878889999999999 4567789999999999999999999999999999
Q ss_pred CCc---chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCC-cccccCHHHHHHHHHHH
Q 019298 133 GFP---IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNP-CGNVYSYQHLQKLAETA 202 (343)
Q Consensus 133 ~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~np-tG~~~~~~~l~~l~~~~ 202 (343)
+|. .........|.++..++.. ++..+++++|++.+.. .+++|++.+|+|. .|+++|.+++++|.++|
T Consensus 77 aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a 154 (290)
T PF01212_consen 77 AHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELA 154 (290)
T ss_dssp EHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred ceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence 874 3334446688888888653 2267999999998854 4678899999886 59999999999999999
Q ss_pred hhcCcEEEEccCCCcccc--CCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc
Q 019298 203 NKLKTLVIADEVYGHLVF--GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD 280 (343)
Q Consensus 203 ~~~~~~~i~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~ 280 (343)
++||+.++.|.+-..-.. .+..+..+..+ -.++..|++|..++++ |.+++.+ ++++++.+....
T Consensus 155 ~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~----~D~v~~~~tK~~g~~~---Gavl~~~-------~~~i~~~~~~~k 220 (290)
T PF01212_consen 155 REHGLPLHMDGARLANAAAALGVSLAEIAAG----ADSVSFGGTKNGGAPG---GAVLAGN-------KEFIAKARRQRK 220 (290)
T ss_dssp HHHT-EEEEEETTHHHHHCHHHHHHHHHHTT----SSEEEEETTSTT-SSS---EEEEEES-------HHHHHHHHHHHH
T ss_pred HhCceEEEEehhhHHHhhhcccccHHHHhhh----CCEEEEEEEccccccc---ceEEEec-------hHHHHHHHHHHH
Confidence 999999999998543111 01111111111 1267778999977776 6666654 355444333321
Q ss_pred -ccc--CcchHHHH--HHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEe
Q 019298 281 -ILG--DPATFIQV--CIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLK 339 (343)
Q Consensus 281 -~~~--~~~~~~~~--a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~ 339 (343)
... ....+..+ ......+.....+.+...+-.++.+.+.+.|+.+ +..+..|..++-+
T Consensus 221 ~~gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~-~~~~~~~~~tn~~ 283 (290)
T PF01212_consen 221 RLGGGMRQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL-GGVLPRPVETNQV 283 (290)
T ss_dssp HHTHHHHHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE-CEEEETTSS-HHH
T ss_pred HhccCeeecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCcEE
Confidence 100 00111111 0000111111344556677777788888899888 4454455544433
No 268
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.68 E-value=5.5e-14 Score=131.88 Aligned_cols=284 Identities=14% Similarity=0.072 Sum_probs=170.1
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++.++|+..|.-. ..++ .+|.+.+++++++.+.. .+.......+.+..+++.+...... ...+.+++++++++|
T Consensus 55 G~~ylD~~~g~~~--~~lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGseA 129 (443)
T PRK06058 55 GNRLIDLGSGIAV--TSVGNSAPRVVEAVREQVARFT--HTCFMVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGAEA 129 (443)
T ss_pred CCEEEEcCcchhh--hccCCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcHHH
Confidence 7888999877533 1233 78999999999987532 1222122345555666666543221 112588889888999
Q ss_pred HHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCc--------------eeEEeecCCC-CC---CCC--------CHH
Q 019298 113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPD-KG---WEV--------DLD 164 (343)
Q Consensus 113 l~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~-~~---~~~--------d~~ 164 (343)
++.+++... ...++|+....+|+++...+..... .+..++.... +. ... .++
T Consensus 130 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (443)
T PRK06058 130 VENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAIT 209 (443)
T ss_pred HHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHH
Confidence 999988542 1237899999999887655443211 1111211100 00 000 122
Q ss_pred HHHhhhcCCceEEEEeCCCCC-cccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEcc
Q 019298 165 DIESLADQNTVALVIINPGNP-CGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS 242 (343)
Q Consensus 165 ~l~~~~~~~~~~i~~~~p~np-tG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S 242 (343)
.+++.+..+..+.++..|.+. .|.. .+.+.+++|.++|++||+++|.||++.++...+... ....++-.++++ +
T Consensus 210 ~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a~~~~gv~PDiv---~ 285 (443)
T PRK06058 210 VIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLI---T 285 (443)
T ss_pred HHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh-HHHhcCCCCCEE---E
Confidence 333443333445566777544 4554 468899999999999999999999999886555322 112222222333 3
Q ss_pred CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHH
Q 019298 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCV 319 (343)
Q Consensus 243 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~ 319 (343)
++|.++ .|+++|++++++ ++.+.+... ...+++.++++++++ .+.|+. +.+ ..++++++.+.+.
T Consensus 286 ~gK~l~-~G~Pi~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa-~a~L~~---~~~~~l~~~~~~~g~~l~ 352 (443)
T PRK06058 286 TAKGIA-GGLPLSAVTGRA--------EIMDAPHPGGLGGTYGGNPVACAAA-LAAIET---IEEDDLVARARQIEALMT 352 (443)
T ss_pred Eccccc-CCCccEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHH-HHHHHH---HHHcCHHHHHHHHHHHHH
Confidence 489987 789999999853 566666544 234667888888887 444432 212 5666777777777
Q ss_pred HhhcCC----CCceeeCCCCceEe
Q 019298 320 PSYKLI----PELINFKSTGSSLK 339 (343)
Q Consensus 320 ~~L~~~----~g~~~~~~~~g~~~ 339 (343)
+.|+++ +.+.-+.+.|.++.
T Consensus 353 ~~L~~l~~~~~~i~~vrg~G~~~~ 376 (443)
T PRK06058 353 DRLRALAAEDDRIGDVRGRGAMIA 376 (443)
T ss_pred HHHHHHHhhCCcEEeeeccceEEE
Confidence 777653 22222355665553
No 269
>PRK04311 selenocysteine synthase; Provisional
Probab=99.68 E-value=1.9e-14 Score=134.22 Aligned_cols=251 Identities=18% Similarity=0.078 Sum_probs=160.9
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC---CC--CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPT---AG--LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA 125 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g--~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd 125 (343)
.+.++++.+++.+.+.......|.-. .| ...+++.+++++ ..++.+++++++.++..++.++ .+||
T Consensus 96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~--------Gae~a~vv~sgtaAl~l~l~~l-~~Gd 166 (464)
T PRK04311 96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT--------GAEDALVVNNNAAAVLLALNAL-AAGK 166 (464)
T ss_pred CCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHh-CCCC
Confidence 34678999999888764321122211 11 257888888887 3456788888889999888665 7899
Q ss_pred eEEEeCCCCcc------hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCC--cccccCHHHHHH
Q 019298 126 NILLPRPGFPI------YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP--CGNVYSYQHLQK 197 (343)
Q Consensus 126 ~vl~~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~np--tG~~~~~~~l~~ 197 (343)
+|++++..+.. +.......|++++.++... ..++++++++++++++++++++++|| +|... .-++++
T Consensus 167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~-~~dl~e 241 (464)
T PRK04311 167 EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTK-EVSLAE 241 (464)
T ss_pred EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCC-cCCHHH
Confidence 99998764432 2235567799988886532 24689999999999999999999998 45321 146889
Q ss_pred HHHHHhhcCcEEEEccCCCccc----cCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 198 LAETANKLKTLVIADEVYGHLV----FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 198 l~~~~~~~~~~~i~D~ay~~~~----~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
|+++|++||+++|+|.+.+.+. ++-...+.+......+-.++++|.+|.++.+ ..|+++++ +++++
T Consensus 242 I~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~--------~~li~ 311 (464)
T PRK04311 242 LAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGK--------KELIA 311 (464)
T ss_pred HHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEc--------HHHHH
Confidence 9999999999999999754431 1100111122211223459999999997766 47888874 36777
Q ss_pred HHhhhh-ccccCcchHHHHHHHhccch----hhHHHHH---------HHHHHHHHHHHHHHhhcCCC
Q 019298 274 RMKKYF-DILGDPATFIQVCIMYGCLS----TIMQIMI---------HGNFLENFAGSCVPSYKLIP 326 (343)
Q Consensus 274 ~l~~~~-~~~~~~~~~~~~a~~~~~l~----~~~~~l~---------~~~~~~~~~~~~~~~L~~~~ 326 (343)
++++.. .....+......+. .+.|. ....+.. ..+++.++.+.+.+.|..++
T Consensus 312 ~l~~~~~~r~lr~dk~~l~~l-~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 312 RLKKHPLKRALRVDKLTLAAL-EATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAAL 377 (464)
T ss_pred HHhhchhHHHHhcchHHHHHH-HHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence 776421 11222333333333 22222 1111221 45777778888888887753
No 270
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.67 E-value=2.8e-15 Score=130.77 Aligned_cols=252 Identities=15% Similarity=0.121 Sum_probs=174.5
Q ss_pred CCCCCCcHHHHHHHHHHHhcCC------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc
Q 019298 48 HSCFHTTHVATEAVAEALLSEK------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS 121 (343)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~ 121 (343)
|.+..-+|++++++.+.++..- -+--+...-...|++.+|++. ..+..++.+++--|....+..|.
T Consensus 181 YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH--------qK~aALlFsSCfVANDstLftLa 252 (570)
T KOG1360|consen 181 YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH--------QKEAALLFSSCFVANDSTLFTLA 252 (570)
T ss_pred cccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh--------cCcceeeeeeeeeccchHHHHHH
Confidence 4556789999999999987421 011111233468999999998 44666666666666666666664
Q ss_pred --CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCCCCCcccccCHHHH
Q 019298 122 --RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPCGNVYSYQHL 195 (343)
Q Consensus 122 --~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~nptG~~~~~~~l 195 (343)
-||..++..+-.|.++....+..+..-..+.. + |++.|++.+.. -|++|-+.+.+..+|.+ -.+
T Consensus 253 k~lpgcei~SD~gNHASMI~GIrns~v~K~IFrH----N---D~~hL~~lL~~~~~svPKivAFEtVhSM~Gav---cpl 322 (570)
T KOG1360|consen 253 KKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH----N---DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAV---CPL 322 (570)
T ss_pred HHCCCcEEeccccchHHHHHHhhhcCCcceeecc----C---CHHHHHHHHHhCCCCCCceEEEeeeeccCCCc---CCH
Confidence 38999999999998888888888876655543 2 67888877643 57788899999999999 557
Q ss_pred HHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC-CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV-PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 196 ~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~-~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
++|++++++||.+-++||+++...|+.........-+-.. -.|+.+++.|+||.-| ||+.++. .+++-
T Consensus 323 eelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~--------~LvDm 391 (570)
T KOG1360|consen 323 EELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATR--------KLVDM 391 (570)
T ss_pred HHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhhh--------hHHHH
Confidence 8889999999999999999998888765433211111111 2489999999999998 9998853 68888
Q ss_pred Hhhhhc--c-ccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 275 MKKYFD--I-LGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 275 l~~~~~--~-~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
++.+.. + +.+.||....-+ ..+++- ..+-...|+..+++..++.+.|.++ |+++
T Consensus 392 iRSyAaGFIFTTSLPP~vl~GA-leaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPV 450 (570)
T KOG1360|consen 392 IRSYAAGFIFTTSLPPMVLAGA-LEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPV 450 (570)
T ss_pred HHHhcCceEEecCCChHHHHhH-HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCcc
Confidence 887753 2 223344322222 222111 0111127777888888888888887 7875
No 271
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.67 E-value=2.7e-15 Score=136.36 Aligned_cols=231 Identities=15% Similarity=0.141 Sum_probs=141.6
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG 158 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 158 (343)
..+..+.+|+.|+ ..+..++++|+|.++..++.+++++||+|++++.||-+....+...|+..++++.. .+.
T Consensus 68 I~eAe~~aA~~fG-------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~-~~~ 139 (417)
T PF01276_consen 68 IKEAEELAARAFG-------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE-DNE 139 (417)
T ss_dssp HHHHHHHHHHHHT-------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE-E-T
T ss_pred HHHHHHHHHHhcC-------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC-ccc
Confidence 4677778888883 23466788999999999999999999999999999999999999999999998765 333
Q ss_pred C----CCCH-----HHHHhhhcC--Cce---EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcc-ccCCC
Q 019298 159 W----EVDL-----DDIESLADQ--NTV---ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-VFGDK 223 (343)
Q Consensus 159 ~----~~d~-----~~l~~~~~~--~~~---~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~-~~~~~ 223 (343)
+ .++. +.++++++. ..+ ++++++|+. .|++ -++++|+++|+++++.+++||||+.. .|. .
T Consensus 140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~---~di~~I~~~~h~~~~~llvDEAhGah~~F~-~ 214 (417)
T PF01276_consen 140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVC---YDIKEIAEICHKHGIPLLVDEAHGAHFGFH-P 214 (417)
T ss_dssp TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEE---E-HHHHHHHHCCTECEEEEE-TT-TTGGCS-G
T ss_pred cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEE---ECHHHHHHHhcccCCEEEEEccccccccCC-C
Confidence 2 2455 888888864 233 488888765 6788 46788999999999999999999964 444 2
Q ss_pred CCCcccccC----CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc--ccCcchHHHHHHHhcc
Q 019298 224 PFVPMGVFG----STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI--LGDPATFIQVCIMYGC 297 (343)
Q Consensus 224 ~~~~~~~~~----~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~~ 297 (343)
-+.+...+. ....++++.|++|+ ++++.-+.++--+..... -.++++..... +.+|+-+..+.+ ..+
T Consensus 215 lp~~a~~~gad~~~~~~~~vvqS~HKt--L~altQts~lh~~~~~~v----~~~~~~~~l~~~~TTSPSY~lmASl-D~a 287 (417)
T PF01276_consen 215 LPRSALALGADRPNDPGIIVVQSTHKT--LPALTQTSMLHVKGDRIV----DHERVNEALSMHQTTSPSYPLMASL-DVA 287 (417)
T ss_dssp GGTTCSSTTSS-CTSBEEEEEEEHHHH--SSS-TT-EEEEEETCCCT----THHHHHHHHHHHS-SS--HHHHHHH-HHH
T ss_pred CccchhhccCccccccceeeeechhhc--ccccccceEEEecCCCcc----cHHHHHHHHHHHcCCChHHHHHHHH-HHH
Confidence 111111111 22357999999999 566666654443333211 12333333221 334444333333 221
Q ss_pred chhhHHHH-H-----HHHHHHHHHHHHHHhh---cCCCCceeeCC
Q 019298 298 LSTIMQIM-I-----HGNFLENFAGSCVPSY---KLIPELINFKS 333 (343)
Q Consensus 298 l~~~~~~l-~-----~~~~~~~~~~~~~~~L---~~~~g~~~~~~ 333 (343)
..++ + ..++..++...+++.+ ++++++.+..|
T Consensus 288 ----~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~ 328 (417)
T PF01276_consen 288 ----RAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGP 328 (417)
T ss_dssp ----HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-
T ss_pred ----HHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Confidence 2233 1 4445555555566665 66666665444
No 272
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.67 E-value=5.2e-14 Score=130.95 Aligned_cols=268 Identities=16% Similarity=0.096 Sum_probs=186.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC-----C--
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----P-- 123 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~-- 123 (343)
..+++...+.+...+..+.. ...-.++...+.+.+..++.+.++.+ ..-.-.+|+|+|+++..++.+... .
T Consensus 72 ~~~~~~a~~~~~~~~~~nl~-d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~ 149 (460)
T COG0076 72 TRVPPVAAELLVSALNKNLG-DPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALA 149 (460)
T ss_pred CCCHHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhh
Confidence 34667778888888776422 22223367899999999999877755 223458899999999988777531 1
Q ss_pred -C------CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE--EEEeCCCCCcccccCHHH
Q 019298 124 -G------ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA--LVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 124 -g------d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~--i~~~~p~nptG~~~~~~~ 194 (343)
+ .+|+++.-.|.++...+..+|++...+++.+. ++.+|++++++++.+.+.. |+-+.+..+||.+ ++
T Consensus 150 ~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---Dd 225 (460)
T COG0076 150 ESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---DD 225 (460)
T ss_pred cccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---CC
Confidence 1 16999999999999999999999999999875 7789999999999886665 7777889999999 99
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccC-CCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~-~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
+++|.++|+++++++++|.||+++... ......+ .+.-..-.=+..+++|. +..=..+||++..+++ .+.+
T Consensus 226 i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~-~f~l~~vdSIt~d~HK~-g~aP~~~G~il~rd~e------~l~~ 297 (460)
T COG0076 226 IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW-DFGLEGVDSITVDGHKY-GLAPIGCGVVLFRDEE------ALRR 297 (460)
T ss_pred HHHHHHHHHHcCCcEEEEccccceeecccCccchh-hcCCCCceEEEECcccc-cCCCCCceEEEEECHH------Hhhh
Confidence 999999999999999999999997642 1111110 11111122456689999 6777889999998643 2444
Q ss_pred HHhhhhc---------cccCcchH-HHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298 274 RMKKYFD---------ILGDPATF-IQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYKLIPELINFK 332 (343)
Q Consensus 274 ~l~~~~~---------~~~~~~~~-~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~ 332 (343)
.+..... .....+.. .+.+..++.+... ..+.+..++..+..+.+.+.|++.+.+++..
T Consensus 298 ~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~ 368 (460)
T COG0076 298 ILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVN 368 (460)
T ss_pred hhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeec
Confidence 3332111 11111111 1333323333321 3344477777789999999999986688433
No 273
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.65 E-value=4.3e-14 Score=130.59 Aligned_cols=269 Identities=16% Similarity=0.046 Sum_probs=166.2
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++++++||..|.-+.+.++ .+|.+.+++++++..... .+. ....+....+++++.+.. ..+.+++++++++|
T Consensus 34 dG~~~lD~~sg~~~~~lGh-~~p~v~~a~~~q~~~~~~-~~~--~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA 105 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGH-CNPGMVEALAAQAEKLIN-PSP--AFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEA 105 (395)
T ss_pred CCCEEEECCcChhhccCCC-CCHHHHHHHHHHHHhccc-ccc--cccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHH
Confidence 3789999998764422222 479999999998875321 121 234567888888886521 24689999999999
Q ss_pred HHHHHHHhcC------CC-CeEEEeCCCCcchHHHHHh-cCceeEE---eecCCC--CCCCCCHHHHHhhhcCCceEEEE
Q 019298 113 IDVAMALLSR------PG-ANILLPRPGFPIYELSAAF-RHIEVRH---FDLLPD--KGWEVDLDDIESLADQNTVALVI 179 (343)
Q Consensus 113 l~~~~~~l~~------~g-d~vl~~~p~~~~~~~~~~~-~g~~~~~---~~~~~~--~~~~~d~~~l~~~~~~~~~~i~~ 179 (343)
+..+++.+.. +| .+|+..+.+|++....+.. .+..... .+..+. .....|++.+++.+.+++.++++
T Consensus 106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~ 185 (395)
T PRK03715 106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVML 185 (395)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEE
Confidence 9999988741 23 5788888888765443333 2322110 111100 00013688999888766666666
Q ss_pred eCCCCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE
Q 019298 180 INPGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258 (343)
Q Consensus 180 ~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~ 258 (343)
...++..|... +.+.++++.++|++||+++|+||++.++...+... ....++-.+. | .+++|.++. |..+|.++
T Consensus 186 Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~-a~~~~gv~PD-i--~t~gK~lg~-G~p~~av~ 260 (395)
T PRK03715 186 EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLF-AYELSGIEPD-I--MTLGKGIGG-GVPLAALL 260 (395)
T ss_pred eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchh-hHhhcCCCCc-e--eeehhhhhC-CcceEEEE
Confidence 65577778774 68999999999999999999999999865444421 1111121122 3 467899864 68999998
Q ss_pred EeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298 259 TTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~ 324 (343)
+++ ++..........+++.++.+.+++ .+.|+...+ -+.+++++++.+.+.+.|++
T Consensus 261 ~~~--------~i~~~~~~~~~~T~~g~pl~~aaa-la~L~~l~~-~~l~~~~~~~g~~l~~~L~~ 316 (395)
T PRK03715 261 AKA--------EVAVFEAGDQGGTYNGNPLMTAVG-VAVISQLLA-PGFLEGVRARGEYLKEKLLE 316 (395)
T ss_pred Ecc--------ccccccCCCcCCCCCCCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHHHH
Confidence 854 332111111222445567666655 344322110 11666677777777776654
No 274
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.65 E-value=1.1e-14 Score=129.43 Aligned_cols=266 Identities=17% Similarity=0.163 Sum_probs=170.8
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
+++.++||..|... +.++ .+|.+.++++++.+.- ..+.|.. +.+.++++.+.+.. + ..+.|++++++
T Consensus 40 ~G~~YlDf~~Giav--~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~-----~~~~~la~~L~~~s--~-~~d~vff~NSG 109 (404)
T COG4992 40 QGREYLDFAAGIAV--NNLGHCHPALVEALKEQAEKLWHVSNLFYN-----EPQAELAEKLVELS--P-FADRVFFCNSG 109 (404)
T ss_pred CCCEeeeeccceee--eccCCCCHHHHHHHHHHHHHhhhcccccCC-----hHHHHHHHHHHhhC--c-cccEEEEcCCc
Confidence 38899999888754 2244 8999999999988752 2223333 44555555554311 2 37899999999
Q ss_pred HHHHHHHHHHhcC----C-CCeEEEeCCCCcchHHHHHhcCceeEEe----ecCCCCCCC--CCHHHHHhhhcCCceEEE
Q 019298 110 TQAIDVAMALLSR----P-GANILLPRPGFPIYELSAAFRHIEVRHF----DLLPDKGWE--VDLDDIESLADQNTVALV 178 (343)
Q Consensus 110 ~~al~~~~~~l~~----~-gd~vl~~~p~~~~~~~~~~~~g~~~~~~----~~~~~~~~~--~d~~~l~~~~~~~~~~i~ 178 (343)
++|++.+++...+ + ..+|+....+|++-.-.+...+.+.++. |+.+.-.+. =|++++++++++++.+|+
T Consensus 110 aEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~~taAvi 189 (404)
T COG4992 110 AEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDEDTAAVI 189 (404)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhccCeEEEE
Confidence 9999999988632 2 2377777777765332222222221110 111110000 179999999999888888
Q ss_pred EeCCCCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298 179 IINPGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 179 ~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
+.--+.-.|+.. +.+.++++.++|++||+++|.||++.++...|+-+ ...-++-.++ |.++.|.+ ..|+.+|.+
T Consensus 190 vEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~f-A~e~~gV~PD---I~tlaK~L-gGG~PigA~ 264 (404)
T COG4992 190 VEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLF-AYEHYGVEPD---ILTLAKAL-GGGFPIGAM 264 (404)
T ss_pred EecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHH-HHHHhCCCCC---EEEeeccc-cCCccceee
Confidence 877788899884 56789999999999999999999999987666521 1111121122 33579995 466999999
Q ss_pred EEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhcCC
Q 019298 258 VTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~~~ 325 (343)
++.. .+.+.+... +..++..+|++.+++ .+.|+ ...+ ..++.+++-+.+.+.|+++
T Consensus 265 la~~--------~~~~~~~~G~HgSTfGGNpLacAv~-~a~l~---~l~~e~ll~~v~~~g~~~~~~L~~l 323 (404)
T COG4992 265 LATE--------EIASAFTPGDHGSTFGGNPLACAVA-LAVLE---VLLEEGLLENVREKGEYLLQRLREL 323 (404)
T ss_pred EEch--------hhhhcCCCCcccCCCCcCHHHHHHH-HHHHH---HHcchhHHHHHHHHHHHHHHHHHHH
Confidence 9842 233334333 234667788888777 44432 1111 5666666666666666653
No 275
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.65 E-value=4.2e-14 Score=132.15 Aligned_cols=270 Identities=15% Similarity=0.099 Sum_probs=160.7
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||..|.-.. .++ .+|.+.+++++++.......+. .-..+.+..+++.+.+.. +-..+++++++++++
T Consensus 40 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~--p~~~~~v~f~~sGse 113 (423)
T PRK05964 40 DGRELIDAISSWWVA--THGHNHPYIDQAIREQLDRLDHVIFA--GFTHEPAERLAQRLVALT--PGGLDHVFFSDSGSV 113 (423)
T ss_pred CCCEEEEcchhHHhc--cCCCCCHHHHHHHHHHHhhCCCcccc--ccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCcHH
Confidence 388999998886332 233 6899999999998753211110 011234445555554322 212468999999999
Q ss_pred HHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCCCCCCCHHHHHhhh
Q 019298 112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 112 al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
|++.+++.... + ..+|+...-+|++....+...... +..++....+....+++.+++.+
T Consensus 114 A~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l 193 (423)
T PRK05964 114 AVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALL 193 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHH
Confidence 99999987531 2 357888888887755443332111 11222111010011277788777
Q ss_pred cC--CceEEEEeCC--CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcc
Q 019298 171 DQ--NTVALVIINP--GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (343)
Q Consensus 171 ~~--~~~~i~~~~p--~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 245 (343)
.. +..+.++..| ++..|... +.+.+++|.++|++||+++|+||++.++...+... ....++.... +.+++|
T Consensus 194 ~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pD---i~~~~K 269 (423)
T PRK05964 194 EKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPD---IMCLSK 269 (423)
T ss_pred HhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCC---eeeeeh
Confidence 42 2333444555 66778765 89999999999999999999999998875544321 1111221122 236789
Q ss_pred ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-------hccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHH
Q 019298 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAG 316 (343)
Q Consensus 246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~ 316 (343)
.++..++++|+++++ +++.+.+... ...++..++++.+++ .+.|+. ... ..+++++.-+
T Consensus 270 ~l~gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa-~a~l~~l~~~~---~~~~~~~~g~ 337 (423)
T PRK05964 270 GLTGGYLPLAATLCT--------AEIFEAFYSDDRAKAFMHSPSYTANPLACAAA-NASLDLFEDEP---VLERVAALSA 337 (423)
T ss_pred hhhcCcccceEEEEc--------HHHHHhhhcCCcccccccCCCCCcCHHHHHHH-HHHHHHHHhcC---HHHHHHHHHH
Confidence 987666899998874 4677766431 112335677776666 444431 112 4455555555
Q ss_pred HHHHhhcC
Q 019298 317 SCVPSYKL 324 (343)
Q Consensus 317 ~~~~~L~~ 324 (343)
.+.+.|++
T Consensus 338 ~l~~~l~~ 345 (423)
T PRK05964 338 GLAEGLEP 345 (423)
T ss_pred HHHHHHHh
Confidence 55555544
No 276
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.65 E-value=1.1e-13 Score=128.05 Aligned_cols=281 Identities=15% Similarity=0.080 Sum_probs=175.0
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
....|+|--.+ .-.++.+++++...+.+....+|+- .....+++....+..++.||. ..-+|-.-+
T Consensus 48 q~~~l~LiasE------N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a--~~anvqp~S 119 (493)
T PRK13580 48 QRSSLKLIASE------NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGA--EHAYVQPHS 119 (493)
T ss_pred HhcCceEeccc------ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCC--CcccccCCC
Confidence 45667776666 2467888888877776543333332 223345555555555555543 334555555
Q ss_pred ChHHHHHHHHHHhcCC-------------------------------CCeEEEeCCCCcchHH---HHHhcC--ceeEEe
Q 019298 108 GCTQAIDVAMALLSRP-------------------------------GANILLPRPGFPIYEL---SAAFRH--IEVRHF 151 (343)
Q Consensus 108 g~~~al~~~~~~l~~~-------------------------------gd~vl~~~p~~~~~~~---~~~~~g--~~~~~~ 151 (343)
| +.|...++.++++| ||+|+-.++..++... .....+ ..+..+
T Consensus 120 g-~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y 198 (493)
T PRK13580 120 G-ADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSY 198 (493)
T ss_pred c-HHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEec
Confidence 5 66777778888866 7999988777644311 111122 455566
Q ss_pred ecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-ccc
Q 019298 152 DLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGV 230 (343)
Q Consensus 152 ~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~-~~~ 230 (343)
+++++ ...+|.+++++.+++.++.++++..+|-.+ .. ++++|.++|+++|.++++|++|.....++..... ...
T Consensus 199 ~vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~ 273 (493)
T PRK13580 199 GVDPD-TGLLDYDEIAALAREFKPLILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDP 273 (493)
T ss_pred ccCcc-cCccCHHHHHHHHhhcCCEEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCC
Confidence 66543 356999999999998888998888877644 53 5788888899999999999999987665332110 001
Q ss_pred cCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHHH
Q 019298 231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMIH 307 (343)
Q Consensus 231 ~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~~ 307 (343)
.. ...++++|++|++ .|.+.|+++++ +++++.+..... .++++.++..++. ..++... .++-+.
T Consensus 274 ~~--~~D~vtgT~hKaL--~GP~GG~I~~~--------~~l~~~L~~a~P~i~gg~l~p~iAA~-avAl~e~~~~ef~~y 340 (493)
T PRK13580 274 VP--HADIVTTTTHKTL--RGPRGGLVLAK--------KEYADAVDKGCPLVLGGPLPHVMAAK-AVALAEARTPEFQKY 340 (493)
T ss_pred CC--CCcEEEeCChhhc--cCCCeEEEEec--------HHHHHHHhhCCCcccCCCccHHHHHH-HHHHHHHhCccHHHH
Confidence 11 2338999999996 33445888885 367777743332 2333333333333 2223221 123337
Q ss_pred HHHHHHHHHHHHHhhcCCCCceeeC-CCCceEeeec
Q 019298 308 GNFLENFAGSCVPSYKLIPELINFK-STGSSLKYLD 342 (343)
Q Consensus 308 ~~~~~~~~~~~~~~L~~~~g~~~~~-~~~g~~~~~~ 342 (343)
++++.++.+.+.+.|.+. |+.+.. ...+..++++
T Consensus 341 ~~~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~ 375 (493)
T PRK13580 341 AQQVVDNARALAEGFLKR-GARLVTGGTDNHLVLID 375 (493)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEE
Confidence 888999999999999887 787532 2334454443
No 277
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.65 E-value=1.3e-13 Score=128.82 Aligned_cols=289 Identities=18% Similarity=0.127 Sum_probs=164.3
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEE-ecC
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFV-TSG 108 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~-~~g 108 (343)
+++.++||..|.-.. .++ .+|.+.+++++++... ..+.. ....+.+..+++.+.+....+-..+ .+++ +++
T Consensus 37 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~ql~~~~~~~~~---~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s 111 (425)
T PRK09264 37 DGKEYIDFFAGAGAL--NYGHNNPVLKQALIDYLQRDGITHGL---DMHTTAKREFLETFEETILKPRGLDYKVQFTGPT 111 (425)
T ss_pred CCCEeeecccchhhc--cCCCCCHHHHHHHHHHHHhccccccc---ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCC
Confidence 388899998886432 233 7899999999988742 11111 1112344455555543211111122 5655 579
Q ss_pred hHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecCCCCCCC-CCHHHHHhhhcC
Q 019298 109 CTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKGWE-VDLDDIESLADQ 172 (343)
Q Consensus 109 ~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~~-~d~~~l~~~~~~ 172 (343)
+++|++.+++... ....+|+....+|++....+... +. .+..++........ -|++.+++.+.+
T Consensus 112 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~ 191 (425)
T PRK09264 112 GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLED 191 (425)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHh
Confidence 9999999988763 12357888888887765433322 11 12222221100000 256778877742
Q ss_pred -----CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcc
Q 019298 173 -----NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (343)
Q Consensus 173 -----~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 245 (343)
+..+.++..| ....|. .++.+.+++|.++|++||+++|+||++.++...+... ....++-.+++ .+++|
T Consensus 192 ~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~~v~PDi---~t~~K 267 (425)
T PRK09264 192 SSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERAGITPDI---VTLSK 267 (425)
T ss_pred ccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhcCCCCCE---EEecc
Confidence 1234455555 566776 5788999999999999999999999999875544321 11112212232 36689
Q ss_pred ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH---HHHHHHHHHHHHHHh
Q 019298 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI---HGNFLENFAGSCVPS 321 (343)
Q Consensus 246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~---~~~~~~~~~~~~~~~ 321 (343)
.++..|+++|++++++ ++ ..+... ...+++.++++.++. .+.+. ++++ ..++++++.+.+.+.
T Consensus 268 ~l~~~G~pigav~~~~--------~i-~~~~~~~~~~T~~gnp~~~aaa-~a~l~---~~~~~~~l~~~~~~~g~~l~~~ 334 (425)
T PRK09264 268 SISGYGLPMALVLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTA-TAALE---EYWSDDAFEKEVKAKGELVRER 334 (425)
T ss_pred ccCCCccceEEEEEch--------hh-hccCCCccCCCCCCCHHHHHHH-HHHHH---HHHhhhHHHHHHHHHHHHHHHH
Confidence 9887799999999964 33 233221 222445566665554 34432 1221 555666666666665
Q ss_pred hcC----CCCceeeCCCCceEeeecC
Q 019298 322 YKL----IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 322 L~~----~~g~~~~~~~~g~~~~~~l 343 (343)
|++ .|.+.......|+++|+.|
T Consensus 335 l~~l~~~~~~~~~~vrg~Gl~~~i~l 360 (425)
T PRK09264 335 LEEIAAKYPGLGAEVRGRGMMQGIDF 360 (425)
T ss_pred HHHHHHhCCCceecceecccEEEEEe
Confidence 543 3322211233577777653
No 278
>PLN03032 serine decarboxylase; Provisional
Probab=99.65 E-value=3.7e-13 Score=122.42 Aligned_cols=263 Identities=14% Similarity=0.063 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcE--EEecChHHHHHHHHHHhc--CCCCeE
Q 019298 55 HVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALLS--RPGANI 127 (343)
Q Consensus 55 ~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l~--~~gd~v 127 (343)
....+++...+.+. ....+.......++.+.+.+++.+.+| .+++++ ++|+|+|+++..++.... .++..|
T Consensus 37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~v 114 (374)
T PLN03032 37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGIL 114 (374)
T ss_pred hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEE
Confidence 34566666665432 111121122346777777777766555 356666 999999999998877654 245689
Q ss_pred EEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 128 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
+++.-.|.+....++..|.++..+++++ ++.+|+++|++++++ .+.+++++..+|+||.+ +++++|+++|++
T Consensus 115 i~s~~~H~Sv~kaa~~lg~~~~~V~~d~--~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i---dpi~eI~~i~~~ 189 (374)
T PLN03032 115 YASRESHYSVFKAARMYRMEAVKVPTLP--SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV---DDLDRILRILKE 189 (374)
T ss_pred EeCCCceeHHHHHHHHcCCCCeEeeeCC--CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC---CCHHHHHHHHHH
Confidence 9999999999999999999988888754 457999999999976 46677777889999999 788899999999
Q ss_pred cC-----cEEEEccCCCccccC-CCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298 205 LK-----TLVIADEVYGHLVFG-DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278 (343)
Q Consensus 205 ~~-----~~~i~D~ay~~~~~~-~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~ 278 (343)
+| +++++|.+|+.+... ....+.+ .+.. .-..+..|.+|..+ .-..+|.++..+ +..+.+...
T Consensus 190 ~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~-~~~~-~vDSis~s~HK~~g-~P~g~G~ll~r~--------~~~~~~~~~ 258 (374)
T PLN03032 190 LGYTEDRFYIHCDGALFGLMMPFVSRAPEV-TFRK-PIGSVSVSGHKFLG-CPMPCGVALTRK--------KHVKALSQN 258 (374)
T ss_pred hCCCCCCeeEEEEccchhhhhhccCCCccc-CCCc-CCcEEEECcccccC-CCcCeEEEEEEc--------hhhHhhccC
Confidence 96 589999999875321 0000111 1111 12357779999855 334478888864 233333221
Q ss_pred h--------ccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCCCCce
Q 019298 279 F--------DILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKSTGSS 337 (343)
Q Consensus 279 ~--------~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~ 337 (343)
. ...++-+......+ ...|.. ...+.+..++..++.+++.+.|++. ++. +..|....
T Consensus 259 ~~Yl~~~d~ti~gSR~g~~~l~~-w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~ 326 (374)
T PLN03032 259 VEYLNSRDATIMGSRNGHAPLYL-WYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSST 326 (374)
T ss_pred CcccCCCCCcccCCCchHHHHHH-HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceE
Confidence 1 11122222222222 222221 1344447777888888888888886 666 45555443
No 279
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.64 E-value=9.9e-14 Score=129.16 Aligned_cols=251 Identities=17% Similarity=0.065 Sum_probs=155.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC---CC--CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPT---AG--LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA 125 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g--~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd 125 (343)
.+.++.+.+++.+.+.......|.-. .| ...+++.++++++ .+..+++++++.++..++.. +.+||
T Consensus 91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g--------ae~alvv~sg~aAi~l~l~~-l~~Gd 161 (454)
T TIGR00474 91 APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG--------AEDALVVNNNAAAVLLALNT-LAKGK 161 (454)
T ss_pred CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHH-hCCcC
Confidence 34678999999888764211122211 11 2678888888883 34466777888899888855 57999
Q ss_pred eEEEeCCCCcc------hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc--ccccCHHHHHH
Q 019298 126 NILLPRPGFPI------YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC--GNVYSYQHLQK 197 (343)
Q Consensus 126 ~vl~~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt--G~~~~~~~l~~ 197 (343)
+|++.+..|.. +.......|++++.++... ..++++++++++++++++++.+++|++ |.. ...++++
T Consensus 162 eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~-~~~dl~~ 236 (454)
T TIGR00474 162 EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFT-EEVSIAE 236 (454)
T ss_pred EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCC-CCCCHHH
Confidence 99999876432 2335566799988886531 247899999999999999999999985 531 1146888
Q ss_pred HHHHHhhcCcEEEEccCCCccccCC----CCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 198 LAETANKLKTLVIADEVYGHLVFGD----KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 198 l~~~~~~~~~~~i~D~ay~~~~~~~----~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
|+++|+++|+++++|.+.+.+.-.+ ...+.+......+-.++++|.+|.++.+ ..|++++++ ++++
T Consensus 237 I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~--------~~i~ 306 (454)
T TIGR00474 237 LVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKK--------ELIE 306 (454)
T ss_pred HHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECH--------HHHH
Confidence 9999999999999998754431100 0111111122223349999999997766 478888753 5665
Q ss_pred HHhhhhc-cccCcchHHHHHH---HhccchhhHHHHH---------HHHHHHHHHHHHHHhhcCC
Q 019298 274 RMKKYFD-ILGDPATFIQVCI---MYGCLSTIMQIMI---------HGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 274 ~l~~~~~-~~~~~~~~~~~a~---~~~~l~~~~~~l~---------~~~~~~~~~~~~~~~L~~~ 325 (343)
++++..- ....+.....++. ....+.....|.. ..+++.++...+.+.|+..
T Consensus 307 ~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 307 RLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAA 371 (454)
T ss_pred hhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhh
Confidence 5543210 0112222222222 0111111112222 5567777888888888764
No 280
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=1.3e-13 Score=123.63 Aligned_cols=256 Identities=17% Similarity=0.178 Sum_probs=170.7
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~ 130 (343)
...++.++++|.+... +...+ ....+-+.+.+.++..++.. +.+-++++.+++.+++.++.++++|||+|++.
T Consensus 14 ~~v~~~V~~am~~~~~----~h~s~--~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~ 86 (383)
T COG0075 14 VPVPPRVLLAMARPMV----GHRSP--DFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGDKVLVV 86 (383)
T ss_pred CCCCHHHHHHhcCCCC----CCCCH--HHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence 5577888887766432 22333 12233333333333333321 23556677889999999999999999999999
Q ss_pred CCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298 131 RPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (343)
Q Consensus 131 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 206 (343)
..+..+ +...++.+|.+++.+... .+-.+|+++++++++. +.+++.+++.-.+||+. .++++|+++|++||
T Consensus 87 ~nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl---npl~~I~~~~k~~g 161 (383)
T COG0075 87 VNGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL---NPLKEIAKAAKEHG 161 (383)
T ss_pred eCChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccEEEEEeccCccccc---CcHHHHHHHHHHcC
Confidence 888754 566889999999988765 5567999999999984 46678888888999999 67899999999999
Q ss_pred cEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCC-----------CCCc-hHHHH
Q 019298 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCG-----------MFRK-PKVVE 273 (343)
Q Consensus 207 ~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~-----------~~~~-~~~~~ 273 (343)
.++|+|.+-+.. +. ...+..+. -.+++.+-.|.+++ || +|.+..++++. .. | ..+.+
T Consensus 162 ~l~iVDaVsS~G---g~-~~~vd~wg---iDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~yl-DL~~~~~ 231 (383)
T COG0075 162 ALLIVDAVSSLG---GE-PLKVDEWG---IDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYL-DLKKWLK 231 (383)
T ss_pred CEEEEEecccCC---Cc-ccchhhcC---ccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceee-cHHHHHH
Confidence 999999997752 22 22333333 34888889999887 66 67777765320 00 0 01111
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhh-HHHHH-HHHHHHHHHHHHHHhhcCCCCcee
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTI-MQIMI-HGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~-~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
.+++. ..+..+++.....+...+|+.. .+=++ +.++++++.+.+++.++.+ |++.
T Consensus 232 ~~~~~-~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~ 288 (383)
T COG0075 232 YMEKK-GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLEL 288 (383)
T ss_pred HHhhc-CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCcc
Confidence 22111 1233444444433335555432 22233 8999999999999999988 7774
No 281
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.63 E-value=2.5e-13 Score=126.22 Aligned_cols=289 Identities=16% Similarity=0.097 Sum_probs=163.5
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEEE-ecC
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFV-TSG 108 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~-~~g 108 (343)
+++.++|+..|.-.. .++ .+|.+.+++++++.+. .... .....+.+..+++.+.+....+- ..+.+++ +++
T Consensus 33 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~ql~~~~~~~~---~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s 107 (412)
T TIGR02407 33 DGKEYIDFFAGAGAL--NYGHNNPKLKQALIDYLADDGIIHS---LDMATEAKREFLETFNEIILKPRGLDYKVQFPGPT 107 (412)
T ss_pred CCCEEEEcccchhhc--cCCCCCHHHHHHHHHHHhhccceec---cccCcHHHHHHHHHHHHhccCccCCCceEEEeCCC
Confidence 388999998886432 233 7899999999998742 1111 11123444555555543210011 1125655 588
Q ss_pred hHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecCCCCCC-CCCHHHHHhhhcC
Q 019298 109 CTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKGW-EVDLDDIESLADQ 172 (343)
Q Consensus 109 ~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~d~~~l~~~~~~ 172 (343)
++++++.+++.... ...+|+..+-+|++....+... +. .+..++....... .-+++.+++.+.+
T Consensus 108 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~ 187 (412)
T TIGR02407 108 GTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLED 187 (412)
T ss_pred chHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHh
Confidence 99999999987642 2367888888887765444332 21 1122221100000 0136667777742
Q ss_pred -----CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcc
Q 019298 173 -----NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (343)
Q Consensus 173 -----~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 245 (343)
+..+.++.-| .++.|. ..+.+.+++|.++|++||+++|+||++.++...+... ....++-.+. ++ +++|
T Consensus 188 ~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-a~~~~~v~PD-i~--~~~K 263 (412)
T TIGR02407 188 SSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFF-SFEPAGIEPD-IV--CLSK 263 (412)
T ss_pred ccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhH-HhcccCCCCC-EE--Eech
Confidence 1223444555 788898 5789999999999999999999999999775444321 1111111122 33 5789
Q ss_pred ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH---HHHHHHHHHHHHHHh
Q 019298 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI---HGNFLENFAGSCVPS 321 (343)
Q Consensus 246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~---~~~~~~~~~~~~~~~ 321 (343)
.++..|+++|++++++ ++ ..+... ...+++.++++.+++ .+.++ .+++ ..+++++..+.+.+.
T Consensus 264 ~lg~~G~pigav~~~~--------~~-~~~~~~~~~~T~~gnpl~~aaa-~a~l~---~~i~~~~l~~~~~~~g~~l~~~ 330 (412)
T TIGR02407 264 SISGYGLPLALTLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTA-TAALE---YYWSDDAFEKAVQRKSEIIQER 330 (412)
T ss_pred hccCCccceeEEEEch--------hh-hccCCCccCCCCCccHHHHHHH-HHHHH---HHhcccHHHHHHHHHHHHHHHH
Confidence 9765599999999953 22 322212 222445666655443 23222 1222 344444444444444
Q ss_pred hc----CCCCceeeCCCCceEeeecC
Q 019298 322 YK----LIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 322 L~----~~~g~~~~~~~~g~~~~~~l 343 (343)
|+ .+|++....+..|+++|+.|
T Consensus 331 l~~l~~~~~~~~~~vrg~Gl~~~l~l 356 (412)
T TIGR02407 331 LDRIVAEYPELIKQVRGRGLMQGIEC 356 (412)
T ss_pred HHHHHhhCCCceEeeecceeEEEEEe
Confidence 43 34433333455688888864
No 282
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.62 E-value=1.4e-13 Score=129.03 Aligned_cols=267 Identities=13% Similarity=0.071 Sum_probs=157.6
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc-EEEecCh
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGC 109 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-i~~~~g~ 109 (343)
++++++|+..|.-.. .++ .+|.+.+++++++.... .+.. ....+.+..+|+.+............ ++.++++
T Consensus 37 dG~~ylD~~~g~~~~--~lGh~~p~i~~ai~~q~~~~~~~~~~---~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sG 111 (442)
T TIGR00709 37 EGKEYLDFLAGAGTL--ALGHNHPNMKQKILDYLQSGLPLHTL---DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSG 111 (442)
T ss_pred CCCEEEEccccHhhh--cCCCCCHHHHHHHHHHHHhccCcccc---ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCH
Confidence 388999998886432 233 78999999999987532 1110 01224555555655442221101134 4556899
Q ss_pred HHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCCCCC--------CH---
Q 019298 110 TQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEV--------DL--- 163 (343)
Q Consensus 110 ~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~--------d~--- 163 (343)
++|.+.+++.... ...+|+...-+|++....+..... .+..++.. +.+.. +.
T Consensus 112 sEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 189 (442)
T TIGR00709 112 ADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP--HEYRCPFGIGGEAGSNAS 189 (442)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC--ccccccccCCchhHHHHH
Confidence 9999999887531 235788888888877654443211 11222211 11111 11
Q ss_pred -HHHHhhhc------CCceEEEEeCCC-CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298 164 -DDIESLAD------QNTVALVIINPG-NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (343)
Q Consensus 164 -~~l~~~~~------~~~~~i~~~~p~-nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~ 235 (343)
+.+++.+. ++..++++.... |+.....+++.++++.++|++||+++|.||++.+|...+. ......++-.+
T Consensus 190 ~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~a~~~~gv~P 268 (442)
T TIGR00709 190 IEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGT-MFAFEHAGIEP 268 (442)
T ss_pred HHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc-hhHHHHcCCCC
Confidence 12333332 234444544334 4544558999999999999999999999999999876553 22222233222
Q ss_pred CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh-hhccccCcchHHHHHHHhccchhhHHHHH--HHHHHH
Q 019298 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK-YFDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLE 312 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~ 312 (343)
. |++ ++|.++. |+++|++++++ + .+.+.. ....+++.++++++++ .+.|+. +.+ ..++++
T Consensus 269 D-iv~--~gK~l~~-G~Pigav~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa-~a~L~~---i~~~~l~~~~~ 331 (442)
T TIGR00709 269 D-FVV--MSKAVGG-GLPLAVLLIAP--------E-FDAWQPAGHTGTFRGNQLAMVTG-TEALNY---WKDDNLAQNAQ 331 (442)
T ss_pred c-EEE--EcccccC-CcccEEEEEch--------H-HhccCCCcCCCCCCcCHHHHHHH-HHHHHH---HHhcCHHHHHH
Confidence 3 434 7999876 89999999853 3 232221 2233567788888888 555432 112 556666
Q ss_pred HHHHHHHHhhcC
Q 019298 313 NFAGSCVPSYKL 324 (343)
Q Consensus 313 ~~~~~~~~~L~~ 324 (343)
++.+.+.+.|++
T Consensus 332 ~~g~~l~~~L~~ 343 (442)
T TIGR00709 332 ERGERITSFLDD 343 (442)
T ss_pred HHHHHHHHHHHH
Confidence 666766666654
No 283
>PRK06541 hypothetical protein; Provisional
Probab=99.62 E-value=3e-13 Score=127.11 Aligned_cols=269 Identities=17% Similarity=0.114 Sum_probs=163.2
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++.++|+..|.-.. .++ .+|.+.+++++++..... +.......+.+..+++.+.+.. +-..+.+++++++++|
T Consensus 51 G~~ylD~~~g~~~~--~lGh~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~--p~~~~~v~f~~sGseA 124 (460)
T PRK06541 51 GKRYLDGLAGLFVV--QVGHGRAELAEAAAKQAGTLAF--FPLWSYAHPPAIELAERLAALA--PGDLNRVFFTTGGSEA 124 (460)
T ss_pred CCEEEECCccHHhc--cCCCCCHHHHHHHHHHHhhCcC--ccccccCCHHHHHHHHHHHHhC--CCCcCEEEEcCCcHHH
Confidence 88999998885331 233 689999999999875321 1111111233444555544321 1224689999999999
Q ss_pred HHHHHHHhcC--------CCCeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecCCCCC---CCCC------
Q 019298 113 IDVAMALLSR--------PGANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKG---WEVD------ 162 (343)
Q Consensus 113 l~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~---~~~d------ 162 (343)
++.+++.... ...+|+...-+|++....+... |. .+..++...... +.-+
T Consensus 125 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 204 (460)
T PRK06541 125 VESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGR 204 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHH
Confidence 9999886531 1367888888887765433322 11 111121110000 1111
Q ss_pred --HHHHHhhhc---CCceEEEEeCC-CCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298 163 --LDDIESLAD---QNTVALVIINP-GNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (343)
Q Consensus 163 --~~~l~~~~~---~~~~~i~~~~p-~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~ 235 (343)
++.+++.+. .+..+.++..| +++.|.+.+ .+.+++|.++|++||+++|+||++.++...+... ....++-.+
T Consensus 205 ~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~gv~P 283 (460)
T PRK06541 205 WAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGYVP 283 (460)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhcCCCC
Confidence 356776664 24556677778 889998854 8899999999999999999999998764333321 111122222
Q ss_pred CEEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhhHHHHH--H
Q 019298 236 PILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTIMQIMI--H 307 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~ 307 (343)
. ++ +++|.++ .|+ ++|++++++ ++.+.+... ...++..++++.+++ .+.|+ .+.+ .
T Consensus 284 D-iv--t~gK~l~-~G~~pigav~~~~--------~i~~~~~~~~~~~~~~~T~~gnp~~~aaa-la~l~---~l~~~~~ 347 (460)
T PRK06541 284 D-II--TCAKGIT-SGYSPLGAMIASD--------RLFEPFLDGPTMFLHGYTFGGHPVSAAVA-LANLD---IFEREGL 347 (460)
T ss_pred C-EE--Eeccccc-CCccceeEEEEcH--------HHHHHhhcCCCccccCCCCCCCHHHHHHH-HHHHH---HHHhccH
Confidence 2 33 4899977 776 999999963 566665422 112445566766665 33332 1212 6
Q ss_pred HHHHHHHHHHHHHhhcCC
Q 019298 308 GNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 308 ~~~~~~~~~~~~~~L~~~ 325 (343)
.++++++.+.+.+.|+++
T Consensus 348 ~~~~~~~g~~l~~~L~~l 365 (460)
T PRK06541 348 LDHVRDNEPAFRATLEKL 365 (460)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 677888888888877664
No 284
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.61 E-value=3.2e-13 Score=112.41 Aligned_cols=191 Identities=15% Similarity=0.146 Sum_probs=150.4
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCC--------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC
Q 019298 52 HTTHVATEAVAEALLSEKFNGYAP--------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123 (343)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~Y~~--------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~ 123 (343)
-.+++.++++-+.-+.=....|.- .+-..+|.+.+++|+ .-|.+-+|.|+.++-+.++.+++++
T Consensus 28 iLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl--------g~D~~R~t~GARe~KfavMhal~~~ 99 (382)
T COG1103 28 ILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL--------GMDEVRVTAGAREAKFAVMHALCKE 99 (382)
T ss_pred cCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh--------CCceeeecccchhhHHHHHHHhccC
Confidence 367888888877644322222321 123567888999999 5689999999999999999999999
Q ss_pred CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-------CceEEEEeCCCCCcccccCHHHHH
Q 019298 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVIINPGNPCGNVYSYQHLQ 196 (343)
Q Consensus 124 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~i~~~~p~nptG~~~~~~~l~ 196 (343)
||.|++...+|.+....+...|+++..+|-.....+.+++|...+.+.+ .+.+.++++|....|+. .+.+
T Consensus 100 gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~Dak 176 (382)
T COG1103 100 GDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---ADAK 176 (382)
T ss_pred CCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hhhH
Confidence 9999999999999889999999999999866666788998887776642 36677889999889999 7889
Q ss_pred HHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
+++++|+++++++++..+|.. +..+.+...... .++++|-+|++..+| .+|.+..+.
T Consensus 177 kva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~---DFiVgSGHKsmAAs~-PiGvl~~~e 233 (382)
T COG1103 177 KVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGA---DFIVGSGHKSMAASA-PIGVLAMSE 233 (382)
T ss_pred HHHHHHHHcCCceEeecceee----ccccccccccCC---CEEEecCccchhccC-CeeEEeehh
Confidence 999999999999999999987 333333333333 399999999975544 689887753
No 285
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.61 E-value=5.5e-13 Score=125.64 Aligned_cols=267 Identities=12% Similarity=0.083 Sum_probs=162.4
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CCC---HH----HHHHHHHHHhhhCCCCCCCCcE
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT---AGL---PL----TRRAIAEYLSRDLPYKLTPNDV 103 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g~---~~----lr~~ia~~~~~~~~~~~~~~~i 103 (343)
....++|.-.+ ...+|.+++++...+.+....+++.. .|. .. .|+.+++++ +.+++++
T Consensus 33 ~~~~l~l~~se------n~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf------~a~~~~~ 100 (452)
T PTZ00094 33 QIEGLELIASE------NFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF------GLDPEEW 100 (452)
T ss_pred HHcCeeEeccc------ccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh------CCCcccc
Confidence 46678998887 34678899998888764221122211 121 22 344666666 3466777
Q ss_pred EEe---cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh--------cC--ceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 104 FVT---SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF--------RH--IEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 104 ~~~---~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--------~g--~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
.++ +|+++++..++.++.++||+|++....|+........ .+ .++..++++. ++.+|+++|++.+
T Consensus 101 ~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l 178 (452)
T PTZ00094 101 GVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELA 178 (452)
T ss_pred eeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHH
Confidence 666 7889999999999999999999988888665433211 11 2233343433 3679999999998
Q ss_pred cC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC-CcccccCCCCCEEEEccCccccC
Q 019298 171 DQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWI 248 (343)
Q Consensus 171 ~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~ 248 (343)
+. +++++++. ++.+|...+ +++|.++|+++|+++++|++++......... .++. +-.++++|++|+++
T Consensus 179 ~~~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-----~~D~l~~S~hK~l~ 248 (452)
T PTZ00094 179 KAFRPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-----YADVVTTTTHKSLR 248 (452)
T ss_pred HHhCCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-----CCcEEEcCCccCCC
Confidence 54 56665543 345888854 6677788889999999999998755432211 1111 23489999999864
Q ss_pred CCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-cc-ccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhcC
Q 019298 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DI-LGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 249 ~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~~ 324 (343)
+| +.|++.+.+.. . ..+...+.... .. .++++....+++ .+++... ..+-+.++++.++++.+.+.|.+
T Consensus 249 GP--~Gg~l~~~~~~-~---~~l~~~~~~~~~p~~~G~~~~~~iaal-~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~ 321 (452)
T PTZ00094 249 GP--RSGLIFYRKKV-K---PDIENKINEAVFPGLQGGPHNHQIAAI-AVQLKEVQSPEWKEYAKQVLKNAKALAAALEK 321 (452)
T ss_pred CC--CceEEEEeccc-c---hHHHHhhccccCCCCCCCchHHHHHHH-HHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence 33 34787774311 0 01222222111 11 113333333333 4444432 12223778888999999999987
Q ss_pred CCCceeeC
Q 019298 325 IPELINFK 332 (343)
Q Consensus 325 ~~g~~~~~ 332 (343)
. |+.+..
T Consensus 322 ~-g~~v~~ 328 (452)
T PTZ00094 322 R-GYDLVT 328 (452)
T ss_pred C-CcEEec
Confidence 6 777543
No 286
>PLN02271 serine hydroxymethyltransferase
Probab=99.57 E-value=6.1e-12 Score=117.29 Aligned_cols=289 Identities=15% Similarity=0.041 Sum_probs=175.1
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CC---CHHHHHHHHHHHhhhCCCCC-CC-CcEEEe
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT---AG---LPLTRRAIAEYLSRDLPYKL-TP-NDVFVT 106 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g---~~~lr~~ia~~~~~~~~~~~-~~-~~i~~~ 106 (343)
..-|+|--.+ .-.++.+++++...+.+....+|+.. .| ..+++....+...+.++... .. -+|..-
T Consensus 148 ~~~l~LIASE------N~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~ 221 (586)
T PLN02271 148 FKGIELIASE------NFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY 221 (586)
T ss_pred hcCeeecccc------ccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec
Confidence 4556665554 23578888887777655433444422 12 23454444444444454322 11 355555
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH---------HHhcCceeEEeecCC-CCCCCCCHHHHHh-hhcCCce
Q 019298 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---------AAFRHIEVRHFDLLP-DKGWEVDLDDIES-LADQNTV 175 (343)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~---------~~~~g~~~~~~~~~~-~~~~~~d~~~l~~-~~~~~~~ 175 (343)
+++.|+..++.+|++|||+|+..+..|++.... +...|..+..+++.. +....+|.+++++ +...+++
T Consensus 222 -SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPK 300 (586)
T PLN02271 222 -SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPK 300 (586)
T ss_pred -cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCe
Confidence 567888888999999999999988877665332 133454444444322 2345699999998 5567888
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC-CcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
+|++....+| ..+ +++++.++|+++|+++++|.++.......... .++.. -.++++|.+|+ +.|.|-
T Consensus 301 LII~g~Sayp--r~~---D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~-----aDvvt~TTHKt--LrGPrG 368 (586)
T PLN02271 301 ILICGGSSYP--REW---DYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY-----CDIVTSTTHKS--LRGPRG 368 (586)
T ss_pred EEEECchhcc--CcC---CHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC-----CcEEEeCCccc--CCCCCc
Confidence 8887666777 333 35677888889999999999999654432211 22221 23899999999 567777
Q ss_pred EEEEEeCCCC------------CCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHH
Q 019298 255 GWFVTTDPCG------------MFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCV 319 (343)
Q Consensus 255 G~i~~~~~~~------------~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~ 319 (343)
|.+.+.+... ...++++.+++.... ....+.+.....|+...++.. ..++-+..+++.++...|.
T Consensus 369 G~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA 448 (586)
T PLN02271 369 GIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALA 448 (586)
T ss_pred eEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 8888854210 000134555554442 211111222222222334432 2455558888999999999
Q ss_pred HhhcCCCCcee-eCCCCceEeeecC
Q 019298 320 PSYKLIPELIN-FKSTGSSLKYLDL 343 (343)
Q Consensus 320 ~~L~~~~g~~~-~~~~~g~~~~~~l 343 (343)
+.|.+. |+.+ ........+|+|+
T Consensus 449 ~~L~~~-G~~vv~ggTdnHlvLvDl 472 (586)
T PLN02271 449 SALLRR-KCRLVTGGTDNHLLLWDL 472 (586)
T ss_pred HHHHHC-CCeEeeCCCCcceeeecC
Confidence 999887 8884 4445566666664
No 287
>PLN02590 probable tyrosine decarboxylase
Probab=99.57 E-value=4.3e-12 Score=120.19 Aligned_cols=262 Identities=10% Similarity=0.036 Sum_probs=166.5
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEecChHHHHHHHHHHhcC----------
Q 019298 58 TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-----PNDVFVTSGCTQAIDVAMALLSR---------- 122 (343)
Q Consensus 58 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~~~~g~~~al~~~~~~l~~---------- 122 (343)
-+.+..++.. ....|...++..++++.+.+|+.+.+|.+-. ...-++++|+++++..++.+..+
T Consensus 148 gd~l~sa~n~-~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~ 226 (539)
T PLN02590 148 GEMLNAGLSV-VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTL 226 (539)
T ss_pred HHHHHHhccc-ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccC
Confidence 3334444432 3345655667899999999999998876532 12356789999888776655422
Q ss_pred -CCCeEEEeCCCCcchHHHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhcCC------ceEEEEeCCCCCcccccCH
Q 019298 123 -PGANILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 123 -~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~nptG~~~~~ 192 (343)
+.-+|++.+.+|.+....+...|+ .++.++++..+++.+|+++|++++.+. |-+|+-+-....||.+
T Consensus 227 ~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai--- 303 (539)
T PLN02590 227 LPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV--- 303 (539)
T ss_pred CCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc---
Confidence 122566778899999999999998 477888876567789999999988542 3344445557899999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
+++++|+++|++||+|+.||.||+++..-...... +..++. -.=+...++|. +.....+|.+++.++. .+
T Consensus 304 Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~--ADSit~D~HK~-l~~p~~cg~llvr~~~------~l 374 (539)
T PLN02590 304 DPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIEN--ADSFNMNAHKW-LFANQTCSPLWVKDRY------SL 374 (539)
T ss_pred CCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCcc--CCEEEECchhh-cCcCcCEEEEEecCHH------HH
Confidence 99999999999999999999999987533222111 111111 12456689999 4566778888886532 22
Q ss_pred HHHHhhh---h--------------ccccCcc-hHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCceee
Q 019298 272 VERMKKY---F--------------DILGDPA-TFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELINF 331 (343)
Q Consensus 272 ~~~l~~~---~--------------~~~~~~~-~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~ 331 (343)
.+.+... . ......+ .+....+ ...|+. ...+.+..++.-+..+++.+.|++.|++++.
T Consensus 375 ~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLkl-W~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~ 453 (539)
T PLN02590 375 IDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKL-WMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVV 453 (539)
T ss_pred HHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 2222111 0 0000000 1111111 111111 1233337777778888899999888889854
Q ss_pred CC
Q 019298 332 KS 333 (343)
Q Consensus 332 ~~ 333 (343)
.+
T Consensus 454 ~~ 455 (539)
T PLN02590 454 TT 455 (539)
T ss_pred cC
Confidence 43
No 288
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.57 E-value=4.3e-12 Score=119.37 Aligned_cols=286 Identities=13% Similarity=0.031 Sum_probs=157.4
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCC---HHHHHHHHHHHhhhCCCCCCCCcEEE--
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGL---PLTRRAIAEYLSRDLPYKLTPNDVFV-- 105 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~---~~lr~~ia~~~~~~~~~~~~~~~i~~-- 105 (343)
....|+|--.+ ...++.+++++...+.+....+|+. ..|. .++++...+...+.++ ...+.+.+
T Consensus 33 q~~~l~liase------n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv 104 (475)
T PLN03226 33 QWKGLELIASE------NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNV 104 (475)
T ss_pred HHcCeeEecCC------ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEec
Confidence 34567776666 2467899999988884332223322 1232 3333322222222222 23344433
Q ss_pred -ecChHHHHHHHHHHhcCCCCeEEEeCCCCcch-HHHHHh-----cCceeE----EeecCCCCCCCCCHHHHHhhhcC-C
Q 019298 106 -TSGCTQAIDVAMALLSRPGANILLPRPGFPIY-ELSAAF-----RHIEVR----HFDLLPDKGWEVDLDDIESLADQ-N 173 (343)
Q Consensus 106 -~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~-~~~~~~-----~g~~~~----~~~~~~~~~~~~d~~~l~~~~~~-~ 173 (343)
.++++.++..++.+|++|||+|+..+....++ .+.... .+.... .+..+. ++..+|+++|++.+.. +
T Consensus 105 ~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~ 183 (475)
T PLN03226 105 QPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFR 183 (475)
T ss_pred CcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcC
Confidence 36678899999999999999999855322221 121111 112211 333333 4567999999998864 5
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC-CcccccCCCCCEEEEccCccccCCCCC
Q 019298 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGW 252 (343)
Q Consensus 174 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~~~G~ 252 (343)
+++|++ ..++ +|... ++++|.++|+++|.++++|++|.....+.... .++. .-.++++|++|++ .|.
T Consensus 184 pklIv~-~~S~-~s~~~---D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~-----~~Div~~t~hK~L--~GP 251 (475)
T PLN03226 184 PKLIIA-GASA-YPRDW---DYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE-----YCDVVTTTTHKSL--RGP 251 (475)
T ss_pred CeEEEE-ecCc-CCCcc---CHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC-----CCeEEEecCcccc--cCC
Confidence 665544 3333 56663 46678888999999999999998755443221 1111 2338899999996 333
Q ss_pred cEEEEEEeCCCCCCC-------chHHHHHHhhhh-ccccCcchHHHHHHHhccchhhH--HHHHHHHHHHHHHHHHHHhh
Q 019298 253 RLGWFVTTDPCGMFR-------KPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIM--QIMIHGNFLENFAGSCVPSY 322 (343)
Q Consensus 253 r~G~i~~~~~~~~~~-------~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~--~~l~~~~~~~~~~~~~~~~L 322 (343)
+.|++.+++.. ... ..++.+.+.... ..+.+.+...+.++..+++.... .+-+.++++.++.+.+.+.|
T Consensus 252 ~Gg~I~~~~~~-~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L 330 (475)
T PLN03226 252 RGGMIFFRKGP-KPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRL 330 (475)
T ss_pred CceEEEEchhh-cccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHH
Confidence 34888875321 100 001222222121 11222233333333244444321 22236888999999999999
Q ss_pred cCCCCceeeCC-CCceEeeec
Q 019298 323 KLIPELINFKS-TGSSLKYLD 342 (343)
Q Consensus 323 ~~~~g~~~~~~-~~g~~~~~~ 342 (343)
.+. |+.+..+ .....++++
T Consensus 331 ~~~-G~~l~~~~t~~hi~lv~ 350 (475)
T PLN03226 331 MSK-GYKLVTGGTDNHLVLWD 350 (475)
T ss_pred HhC-CCEEEcCCCCCCEEEEE
Confidence 886 8886543 223444443
No 289
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.56 E-value=3.6e-13 Score=123.01 Aligned_cols=242 Identities=12% Similarity=0.015 Sum_probs=151.8
Q ss_pred CCCcHHHHHHHHHHHhcC---CCCCCCCC-------CCCHHHHHHHHHHHhhhCCCCC-CCCcEEEecC-hHHHHHHHHH
Q 019298 51 FHTTHVATEAVAEALLSE---KFNGYAPT-------AGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTSG-CTQAIDVAMA 118 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~---~~~~Y~~~-------~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~g-~~~al~~~~~ 118 (343)
...++.+++++.+.+.+. .-..|... .-..+.|+.+++++ +. ++++|++|+| +|++++.++.
T Consensus 8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~------~~~~~~~vvf~~gs~T~a~~~~~~ 81 (355)
T cd00611 8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELL------NIPDNYKVLFLQGGATGQFAAVPL 81 (355)
T ss_pred CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEEcCCchHHHHHHHH
Confidence 567899999998887421 11112221 12356778888887 33 4678999988 9999999999
Q ss_pred HhcC---CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC-HHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 119 LLSR---PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD-LDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 119 ~l~~---~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
.+.. +||.|++ .+....+...++..|.+++.++.+....+ .+ .+..+..+++++++|.+++..|.||...+
T Consensus 82 ~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~--- 156 (355)
T cd00611 82 NLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD--- 156 (355)
T ss_pred hcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc---
Confidence 9987 4455543 22222223367888998888876432222 13 23333345678899999999999999743
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
++++.+|+++++|.+..... .+..+..++ +.+.|..|.||.+| +|+++++. ++.++
T Consensus 157 -----~i~~~~g~~~~VDa~qs~g~----~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~--------~~~~~ 212 (355)
T cd00611 157 -----EVPDTGGVPLVADMSSNILS----RPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRK--------DLLGK 212 (355)
T ss_pred -----eecccCCCeEEEEccccccC----CCCCHHHhC-----EEEeecccccCCCc--eEEEEECH--------HHHhh
Confidence 34446999999999998732 222232222 45666899988777 78887754 33333
Q ss_pred Hhhh-----------h--ccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhhcCCCCc
Q 019298 275 MKKY-----------F--DILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSYKLIPEL 328 (343)
Q Consensus 275 l~~~-----------~--~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L~~~~g~ 328 (343)
+... . ...+.++.....++ .++++...+. ++ ..++.++..+.+.+.|+++||+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L-~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl 281 (355)
T cd00611 213 ARKITPSMLNYKTHADNNSLYNTPPTFAIYMM-GLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF 281 (355)
T ss_pred cccCCCCcccHHHHHhcCCCCCCChHHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 2211 1 11223333333443 5555433222 33 7888899999999999999876
No 290
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.56 E-value=9.6e-13 Score=120.36 Aligned_cols=268 Identities=16% Similarity=0.084 Sum_probs=162.8
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEEEecCh
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTSGC 109 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~g~ 109 (343)
++.+|||..|.... +++ .+|.+.+++++++.... ...|.......++-+.+.+.+ +. ..+.+++++++
T Consensus 55 G~~ylDf~sgi~v~--~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~------p~~~~~~~~f~~sG 126 (447)
T COG0160 55 GNEYLDFLSGIAVL--NLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALA------PGSGLKKVFFGNSG 126 (447)
T ss_pred CCEEEEcccCcchh--ccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhC------CcccCCeEEecCCc
Confidence 88999999876442 233 78999999999887532 223333222334444444444 22 45689999999
Q ss_pred HHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHh-cCc-------------eeEEeecCCC--CCCCC--------CH
Q 019298 110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAF-RHI-------------EVRHFDLLPD--KGWEV--------DL 163 (343)
Q Consensus 110 ~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~--~~~~~--------d~ 163 (343)
++|++.+++... .....|+...-.|++....+.. .|. .+..+|.... .-+.. ..
T Consensus 127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~ 206 (447)
T COG0160 127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDAL 206 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHH
Confidence 999999998753 2235777777777654333222 221 1333333211 11111 23
Q ss_pred HHHHhhhcC-----CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC
Q 019298 164 DDIESLADQ-----NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236 (343)
Q Consensus 164 ~~l~~~~~~-----~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~ 236 (343)
+.+++.+.. ...+.++.-| +.-.|.. .|++.++++.++|++||+++|+||++.++...|+ ...+..++-.+.
T Consensus 207 ~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~-~fa~E~~gv~PD 285 (447)
T COG0160 207 EYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGK-MFAFEHFGVEPD 285 (447)
T ss_pred HHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-chhhhhcCCCCC
Confidence 445553321 2344455555 7778877 6678899999999999999999999999987773 334333333223
Q ss_pred EEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHH
Q 019298 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAG 316 (343)
Q Consensus 237 ~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~ 316 (343)
++ +++|.++. |+.+|.++.. +++.+..-.....++..++++.+++ .+.|+...+- .+.++..+.-+
T Consensus 286 iv---t~aK~ig~-G~Pl~avv~r--------~ei~~~~~g~~~~Tf~GNpva~Aaa-~AvL~vie~e-~L~~~a~~~G~ 351 (447)
T COG0160 286 IV---TLAKSLGG-GLPLSAVVGR--------AEIMDWPPGGHGGTFGGNPVACAAA-LAVLDVIEEE-NLLERAAELGE 351 (447)
T ss_pred EE---EecccccC-CCceeEEecc--------HHhcccCCcccCCCCCcCHHHHHHH-HHHHHHHHHc-cHHHHHHHHHH
Confidence 33 57999776 9999999984 3444422222334678888888887 5554321100 15555555555
Q ss_pred HHHHhhcC
Q 019298 317 SCVPSYKL 324 (343)
Q Consensus 317 ~~~~~L~~ 324 (343)
++.+.|.+
T Consensus 352 ~l~~~L~~ 359 (447)
T COG0160 352 YLRDRLEE 359 (447)
T ss_pred HHHHHHHH
Confidence 55555543
No 291
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.55 E-value=4.4e-12 Score=114.10 Aligned_cols=278 Identities=18% Similarity=0.103 Sum_probs=177.3
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
++.+||+..++-.... -..+|.+.+++++++.++. .|+.+ .++.-.+|+.+.++.+ ..|.|-+++++|+|.
T Consensus 52 Gn~YIDy~~~~Gp~il-GH~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTEAt 122 (432)
T COG0001 52 GNEYIDYVLGWGPLIL-GHAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVP---SIEKVRFVNSGTEAT 122 (432)
T ss_pred CCEeeehhccCccccc-CCCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhHHH
Confidence 8899999999833221 2277889999999998874 45553 3566666666655322 348999999999999
Q ss_pred HHHHHHhc--CCCCeEEEeCCCCcchHHHHHh-cCceeEEe--ecC-------------CCCCCCCCHHHHHhhhcCC--
Q 019298 114 DVAMALLS--RPGANILLPRPGFPIYELSAAF-RHIEVRHF--DLL-------------PDKGWEVDLDDIESLADQN-- 173 (343)
Q Consensus 114 ~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~--~~~-------------~~~~~~~d~~~l~~~~~~~-- 173 (343)
..+++... -..|+|+..+-||++..+.+.. .|...-.. +.. -+-+ |++.+++++++.
T Consensus 123 msAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN---D~~al~~~~~~~g~ 199 (432)
T COG0001 123 MSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN---DLEALEEAFEEYGD 199 (432)
T ss_pred HHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC---CHHHHHHHHHHcCC
Confidence 99988753 1338999999999877664433 22111100 000 0011 799999988763
Q ss_pred ceEEEEeCC--CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC
Q 019298 174 TVALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (343)
Q Consensus 174 ~~~i~~~~p--~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G 251 (343)
..+.+|..| .|..=+...++.++.|.++|+++|+++|.||+..+|...-........+.++ +.++.|. ...|
T Consensus 200 ~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi-IGGG 273 (432)
T COG0001 200 DIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI-IGGG 273 (432)
T ss_pred cEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh-hcCC
Confidence 445566777 4543334566789999999999999999999999876542222222222222 3468999 5789
Q ss_pred CcEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC--
Q 019298 252 WRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI-- 325 (343)
Q Consensus 252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~-- 325 (343)
+.+|.+-++ .++.+.+.-. +..+.+.++.+.+|. .+.|.....--...+++.+..+.|.+.|++.
T Consensus 274 lP~ga~gGr--------~eiM~~~~p~g~vyqaGT~sgnplamaAG-~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~ 344 (432)
T COG0001 274 LPIGAFGGR--------AEIMEQLAPLGPVYQAGTLSGNPLAMAAG-LATLEELMTEEGVYERLDALGERLAEGLRAAAE 344 (432)
T ss_pred cceeeeccH--------HHHHhhhCCCCCccccCCCCCcHHHHHHH-HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 999998874 3566655433 223567788888887 5555422110014566666666666666541
Q ss_pred -CCcee-eCCCCceE
Q 019298 326 -PELIN-FKSTGSSL 338 (343)
Q Consensus 326 -~g~~~-~~~~~g~~ 338 (343)
-|+++ ....+++|
T Consensus 345 ~~g~~~~v~~~gsm~ 359 (432)
T COG0001 345 RHGIPLTVNRVGSMF 359 (432)
T ss_pred HhCCCeEEeeecceE
Confidence 25552 23444444
No 292
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=2.3e-12 Score=120.69 Aligned_cols=271 Identities=18% Similarity=0.116 Sum_probs=158.7
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|.-.. .++ .+|.+.+++++++..... +....-..+....+|+.+...... -..+.+++++++++
T Consensus 52 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~-~~~~~v~f~~SGsE 126 (441)
T PRK05769 52 DGNVYLDFNAGIAVT--NVGHAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPG-GFEKKVFFTNSGTE 126 (441)
T ss_pred CCCEEEECCCchhhc--ccCCCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCC-CCCCEEEECCchHH
Confidence 378889998886432 233 679999999999875321 111111123445555555432210 01368999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCCC--CC-C--------CHH
Q 019298 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKG--WE-V--------DLD 164 (343)
Q Consensus 112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~--------d~~ 164 (343)
|++.+++... ....+|+...-+|++....+... +. .+..++...... +. - .++
T Consensus 127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (441)
T PRK05769 127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD 206 (441)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence 9999988653 12367888888887765443332 11 112222110000 00 0 123
Q ss_pred HHHh-hhc----CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCE
Q 019298 165 DIES-LAD----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI 237 (343)
Q Consensus 165 ~l~~-~~~----~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~ 237 (343)
.+++ .++ .+..+.++.-| ....|.. .+.+.++++.++|++||+++|+||++.++...+... ....++-.+.
T Consensus 207 ~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pD- 284 (441)
T PRK05769 207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPD- 284 (441)
T ss_pred HHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCC-
Confidence 3555 222 23344555566 5666775 467899999999999999999999999875554321 2222222223
Q ss_pred EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHH
Q 019298 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGS 317 (343)
Q Consensus 238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~ 317 (343)
++ +++|.++ .|+++|+++++. ++..........+++.++++.+++ .+.|+...+ +..++++++-+.
T Consensus 285 iv--t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa-~a~L~~l~~--~~~~~~~~~g~~ 350 (441)
T PRK05769 285 II--TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAA-LATLEELEE--GLLENAQKLGEY 350 (441)
T ss_pred EE--EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHH-HHHHHHHHH--HHHHHHHHHHHH
Confidence 33 4799987 689999998853 344322222333445677777777 555554333 455666666666
Q ss_pred HHHhhcC
Q 019298 318 CVPSYKL 324 (343)
Q Consensus 318 ~~~~L~~ 324 (343)
+.+.|++
T Consensus 351 l~~~L~~ 357 (441)
T PRK05769 351 LRKELKE 357 (441)
T ss_pred HHHHHHH
Confidence 6666654
No 293
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.54 E-value=2.6e-12 Score=120.41 Aligned_cols=270 Identities=13% Similarity=0.033 Sum_probs=152.9
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~ 110 (343)
+++.++|+..|.-.. .++ .+|.+.++++++++..... .......+....+++.+.... +-. .+.|+++++++
T Consensus 40 dG~~ylD~~~g~~~~--~lGH~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~lae~L~~~~--p~~~~~~v~f~~SGs 113 (445)
T PRK08593 40 DGKTYIDLLASASSQ--NVGHAPPRVVEAIKAQADKFIHY--TPAYMYHEPLVRLAKKLCELA--PGDFEKRVTFGLSGS 113 (445)
T ss_pred CCCEEEECCccHHhh--cCCCCCHHHHHHHHHHHHhccCc--cccccCCHHHHHHHHHHHHhC--CCCCCCEEEECCchH
Confidence 388899998775331 133 7899999999998754211 111111233344444443322 112 25899999999
Q ss_pred HHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHH-hcCc-------------eeEEeecCCCCC--CC-CC-------HH
Q 019298 111 QAIDVAMALLSR--PGANILLPRPGFPIYELSAA-FRHI-------------EVRHFDLLPDKG--WE-VD-------LD 164 (343)
Q Consensus 111 ~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~~--~~-~d-------~~ 164 (343)
+++..+++.... ...+|+..+-+|++....+. ..+. .+..++...... +. .+ ++
T Consensus 114 eA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 193 (445)
T PRK08593 114 DANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLA 193 (445)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHH
Confidence 999999986421 22568888888877544332 2221 122222111000 00 01 23
Q ss_pred HHHhhhc-----CCceEEEEeCCCCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEE
Q 019298 165 DIESLAD-----QNTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238 (343)
Q Consensus 165 ~l~~~~~-----~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i 238 (343)
++++.+. ++..+|++....+..|.. .+.+.++++.++|++||+++|+||++.++...+... ....++-.+.
T Consensus 194 ~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-a~~~~gv~pD-- 270 (445)
T PRK08593 194 PLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-SISHFNITPD-- 270 (445)
T ss_pred HHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-HHHhcCCCCC--
Confidence 4444332 233444444446677876 788999999999999999999999998875544321 1111221122
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGS 317 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~ 317 (343)
+.+++|.++ .|+++|+++++ +++.+.+.... ..+.+.++.+.+++ .+.|+...+ .+..++++++-+.
T Consensus 271 -i~t~gK~l~-~G~p~gav~~~--------~~i~~~~~~~~~~~T~~~~pl~~aaa-~a~l~~l~~-~~l~~~~~~~g~~ 338 (445)
T PRK08593 271 -LMSFGKSLA-GGMPMSAIVGR--------KEIMESLEAPAHLFTTGANPVSCAAA-LATIDMIED-ESLLQRSAEKGEY 338 (445)
T ss_pred -Eeeeccccc-CCcccEEEEEc--------HHHHhhhccCCCCCCCCCCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHH
Confidence 337899976 67999999985 36777664322 23556677777666 444332100 0144444544445
Q ss_pred HHHhhc
Q 019298 318 CVPSYK 323 (343)
Q Consensus 318 ~~~~L~ 323 (343)
+.+.|+
T Consensus 339 l~~~L~ 344 (445)
T PRK08593 339 ARKRFD 344 (445)
T ss_pred HHHHHH
Confidence 544444
No 294
>PLN02880 tyrosine decarboxylase
Probab=99.54 E-value=5.2e-12 Score=119.41 Aligned_cols=197 Identities=9% Similarity=0.022 Sum_probs=137.2
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEecChHHHHHHHHHHhcC----------
Q 019298 58 TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-----PNDVFVTSGCTQAIDVAMALLSR---------- 122 (343)
Q Consensus 58 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~~~~g~~~al~~~~~~l~~---------- 122 (343)
-+.+..++.. ....|...+...++++.+.+|+.+.+|.+-. ...-++|+|+|+++..++.+..+
T Consensus 100 ad~l~~~~n~-~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~ 178 (490)
T PLN02880 100 GEMLSAGLNI-VGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNA 178 (490)
T ss_pred HHHHHHhhcc-CCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccc
Confidence 3434444432 2334544557789999999999988876422 12467789999988777655421
Q ss_pred -CCCeEEEeCCCCcchHHHHHhcCce---eEEeecCCCCCCCCCHHHHHhhhcC-----C-ceEEEEeCCCCCcccccCH
Q 019298 123 -PGANILLPRPGFPIYELSAAFRHIE---VRHFDLLPDKGWEVDLDDIESLADQ-----N-TVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 123 -~gd~vl~~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~~~~-----~-~~~i~~~~p~nptG~~~~~ 192 (343)
+.-+|++.+-+|.+....+..+|+. ++.++++..+++.+|+++|++++.+ . +-+|+-+-....||.+
T Consensus 179 ~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai--- 255 (490)
T PLN02880 179 LEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAV--- 255 (490)
T ss_pred cCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCccc---
Confidence 1225667888899999999999985 6778877656778999999998853 1 3344445557899999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC-cccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
+++++|+++|++||+++++|.||+++........ .+..+. .-.-++.+++|.+ .....+|.+.+.+
T Consensus 256 Dpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie--~aDSit~d~HKwl-~~P~~~g~llvr~ 322 (490)
T PLN02880 256 DPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVE--EADSFNMNAHKWF-LTNFDCSLLWVKD 322 (490)
T ss_pred CcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCch--hcCEEEECchhhc-CCCccEEEEEEeC
Confidence 7889999999999999999999998653221110 111111 1226788999995 6667788888865
No 295
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.54 E-value=1.9e-12 Score=117.45 Aligned_cols=288 Identities=17% Similarity=0.128 Sum_probs=161.3
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCC---HHHHHHHHHHHhhhCCCCCCCCcE---E
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGL---PLTRRAIAEYLSRDLPYKLTPNDV---F 104 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~---~~lr~~ia~~~~~~~~~~~~~~~i---~ 104 (343)
....|+|--.+ .-.+|.+++++...+.+....+|+- ..|. .++++...+..++.|+. .++.. +
T Consensus 19 q~~~l~LiaSE------N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~--~~~~w~anv 90 (399)
T PF00464_consen 19 QRSTLNLIASE------NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGA--EPKEWYANV 90 (399)
T ss_dssp HHHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT---STTTEEEE-
T ss_pred HhcCccccCcc------cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCC--CcccceEEe
Confidence 45668887666 2357888887777665433223332 1222 34444444444444443 33333 2
Q ss_pred EecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH---H-------HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-C
Q 019298 105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL---S-------AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-N 173 (343)
Q Consensus 105 ~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~---~-------~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~ 173 (343)
-..+++.|...++.+|++|||+|+..++.+++... . +.....+...++++++ ...+|.|++++.+.. +
T Consensus 91 qp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~k 169 (399)
T PF00464_consen 91 QPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHK 169 (399)
T ss_dssp --SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH-
T ss_pred ecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcC
Confidence 24567889999999999999999988887755422 1 1223456777887764 568999999997765 7
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (343)
Q Consensus 174 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 252 (343)
|++|++.....|-= -+++++.++|.+.|.+++.|.+|.. ++-++.-+.++.. . .++.+|++|+ ++|.
T Consensus 170 PklIi~G~S~y~~~-----~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-A----Dvvt~sThKt--l~GP 237 (399)
T PF00464_consen 170 PKLIICGASSYPRP-----IDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-A----DVVTGSTHKT--LRGP 237 (399)
T ss_dssp -SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-S----SEEEEESSGG--G-SS
T ss_pred CCEEEECchhccCc-----cCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-c----eEEEeecccc--cccc
Confidence 78877755444422 3578888888899999999999984 4445543444432 2 2999999999 6888
Q ss_pred cEEEEEEe------CCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhc
Q 019298 253 RLGWFVTT------DPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYK 323 (343)
Q Consensus 253 r~G~i~~~------~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~ 323 (343)
|-|.|++. +......++++.+++..... ...+.+.....++...++.+ ..++-+..+++.++.+.|.+.|.
T Consensus 238 rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~ 317 (399)
T PF00464_consen 238 RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQ 317 (399)
T ss_dssp S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999885 00000012578888876642 22222222222221333332 13455688889999999999999
Q ss_pred CCCCceee-CCCCceEeeecC
Q 019298 324 LIPELINF-KSTGSSLKYLDL 343 (343)
Q Consensus 324 ~~~g~~~~-~~~~g~~~~~~l 343 (343)
+. |+.+. ....+..+|+++
T Consensus 318 ~~-G~~v~~ggTd~H~vlvd~ 337 (399)
T PF00464_consen 318 ER-GFKVVTGGTDNHQVLVDL 337 (399)
T ss_dssp HT-T-EEGGGS-SSSEEEEEG
T ss_pred hC-CcEEEECCCCCCeEEEEe
Confidence 88 88854 345566667653
No 296
>PRK15029 arginine decarboxylase; Provisional
Probab=99.53 E-value=1.1e-12 Score=127.69 Aligned_cols=167 Identities=10% Similarity=0.036 Sum_probs=122.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 157 (343)
-..+..+.+|+.|+ .....++++|+|.++..++.+++++||+|++++.||-+..+.+...|+..+++...- +
T Consensus 206 ~I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~-~ 277 (755)
T PRK15029 206 AFGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSR-N 277 (755)
T ss_pred HHHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-c
Confidence 34566777777773 235678999999999999999999999999999999999999999999999886433 2
Q ss_pred CC----CCC-----HHHHHhhhcC--Cce--------EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcc
Q 019298 158 GW----EVD-----LDDIESLADQ--NTV--------ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL 218 (343)
Q Consensus 158 ~~----~~d-----~~~l~~~~~~--~~~--------~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~ 218 (343)
.+ .++ .+.+++++.. ..+ ++++++|+. .|++ .++++|+++|+++++.+++||||+..
T Consensus 278 ~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~---~di~~I~~~~h~~~~~llvDEAhGah 353 (755)
T PRK15029 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVC---YNAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_pred ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-ccee---eCHHHHHHHHHhcCCeEEEECccccc
Confidence 22 233 7888888753 223 778888755 6888 46788899999999999999999864
Q ss_pred -ccCCCCCCccccc-----CCCC-CEEEEccCccccCCCCCcEEEEEE
Q 019298 219 -VFGDKPFVPMGVF-----GSTV-PILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 219 -~~~~~~~~~~~~~-----~~~~-~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
.|.. .++....+ ...+ .++++.|.+|+ ++++.-|.++-
T Consensus 354 ~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LH 398 (755)
T PRK15029 354 ARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIH 398 (755)
T ss_pred cccCc-cccccccccccccccCCCceEEEEchhhc--ccchhhhhhhe
Confidence 3433 22211111 1123 35999999999 67777776543
No 297
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.52 E-value=3.7e-12 Score=127.61 Aligned_cols=206 Identities=13% Similarity=0.113 Sum_probs=133.5
Q ss_pred eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCC----CCCCHHHHHHHHHHHhhhCCCCCCCC--cEEEec
Q 019298 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYAP----TAGLPLTRRAIAEYLSRDLPYKLTPN--DVFVTS 107 (343)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~ 107 (343)
.+.|+.+... +..+..+.+++...+..... ..|.. ..-..+.|+.+++|+ +.+++ +|++|+
T Consensus 35 ~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~l------ga~~~~~~VvFts 104 (805)
T PLN02724 35 VVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYF------NAPPSDYACVFTS 104 (805)
T ss_pred CEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHh------CCCccceEEEEeC
Confidence 6888888622 33445666666555432111 11211 112457888888888 44554 589999
Q ss_pred ChHHHHHHHHHHh-cCCCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCC------CCCCCCH--HHHHhhhc----
Q 019298 108 GCTQAIDVAMALL-SRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPD------KGWEVDL--DDIESLAD---- 171 (343)
Q Consensus 108 g~~~al~~~~~~l-~~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~------~~~~~d~--~~l~~~~~---- 171 (343)
|+|+++..++..+ .++||+|++..-.|.+... .++..|++++.++++.+ ....+++ +++++.++
T Consensus 105 naT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~ 184 (805)
T PLN02724 105 GATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ 184 (805)
T ss_pred ChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence 9999999999887 5789999998777766443 33445888888876521 1112332 55665431
Q ss_pred ------CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc-----CcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298 172 ------QNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-----KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (343)
Q Consensus 172 ------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-----~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (343)
++++++.++..+|-||..+|.+.+.++.+.++.+ ++++++|.++.. +..+..+..++ -.+++
T Consensus 185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~---~Dfl~ 257 (805)
T PLN02724 185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYP---ADFVV 257 (805)
T ss_pred cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcC---CCEEE
Confidence 3457889999999999999987655544443332 368999999876 22223333333 34899
Q ss_pred ccCccccC-CCCCcEEEEEEeC
Q 019298 241 GSLSKRWI-VPGWRLGWFVTTD 261 (343)
Q Consensus 241 ~S~sK~~~-~~G~r~G~i~~~~ 261 (343)
.|++|.|| ..| +|++.+..
T Consensus 258 ~S~HK~~GgP~G--~G~L~vr~ 277 (805)
T PLN02724 258 VSFYKIFGYPTG--LGALLVRR 277 (805)
T ss_pred EecceeccCCCC--ceEEEEeh
Confidence 99999987 345 78887754
No 298
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.52 E-value=1.9e-13 Score=115.03 Aligned_cols=209 Identities=16% Similarity=0.143 Sum_probs=145.7
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEE
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF 104 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~ 104 (343)
...++++|+-++ |.++-.+|++.++-.+++.+- ...+|.. -+..|+..||+|. ..|..+
T Consensus 65 ~~k~ilnFcaNn---YLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~--iHk~LE~kiAqfh--------~rED~i 131 (417)
T KOG1359|consen 65 SDKKILNFCANN---YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQD--IHKLLESKIAQFH--------GREDTI 131 (417)
T ss_pred cccceeeecccc---cccccCChHHHHHHHHHHHHhCCCccceeEEecchH--HHHHHHHHHHHHh--------CCCceE
Confidence 367888998877 456778999999988887641 1122222 2467888888888 457888
Q ss_pred EecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh----cCCceEEEEe
Q 019298 105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA----DQNTVALVII 180 (343)
Q Consensus 105 ~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~----~~~~~~i~~~ 180 (343)
+.+++-+|...++.++..|.|.|+..+-.|.+..+..+.+. +.. .+|+-.++..+ +.+-++|+-.
T Consensus 132 lypscfdANag~feail~pedAvfSDeLNhASIIdGirLck-ry~----------h~dv~~l~~~l~~a~k~r~klv~TD 200 (417)
T KOG1359|consen 132 LYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK-RYR----------HVDVFDLEHCLISACKMRLKLVVTD 200 (417)
T ss_pred EeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHh-hhc----------cchhHHHHHHHHHhhhheEEEEEec
Confidence 88888999999999999999999999989988777666554 111 13444455433 3344444444
Q ss_pred CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC-CCEEEEccCccccCCCCCcEEEEEE
Q 019298 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~-~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
..-...|.+ ..+++|++++++||.++++||+|+-+.++...-.....++-. +-.|+.++++|+.|. .--||..+
T Consensus 201 g~FSMDGdi---aPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGg--a~GGyttg 275 (417)
T KOG1359|consen 201 GVFSMDGDI---APLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGG--ASGGYTTG 275 (417)
T ss_pred ceeccCCCc---ccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcC--CCCCCccC
Confidence 446889999 457778888889999999999999887765433333333322 235889999999763 33499998
Q ss_pred eCCCCCCCchHHHHHHhhh
Q 019298 260 TDPCGMFRKPKVVERMKKY 278 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~ 278 (343)
|. +++.-++..
T Consensus 276 p~--------~li~llrqr 286 (417)
T KOG1359|consen 276 PK--------PLISLLRQR 286 (417)
T ss_pred Ch--------hHHHHHHhc
Confidence 74 566666554
No 299
>PLN02263 serine decarboxylase
Probab=99.52 E-value=3.3e-11 Score=111.57 Aligned_cols=245 Identities=12% Similarity=0.009 Sum_probs=162.5
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCC
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLP 155 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 155 (343)
+..++++.+.+|+.+.+|.+-..-.=++|+|+|+++..++.+..+ +...+++++-+|.+....+..+|++++.++++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d- 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL- 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence 568999999999998877543211347899999999988877643 33478899999999999999999999999875
Q ss_pred CCCCCCCHHHHHhhhcCC---ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCc-----EEEEccCCCccccCC-CCCC
Q 019298 156 DKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLKT-----LVIADEVYGHLVFGD-KPFV 226 (343)
Q Consensus 156 ~~~~~~d~~~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~~i~D~ay~~~~~~~-~~~~ 226 (343)
.++.+|+++|++++.++ +-+|+.+-+..++|.+ +++++|.++|+++|+ ++.+|.||+++...- ...+
T Consensus 209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~ 284 (470)
T PLN02263 209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP 284 (470)
T ss_pred -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence 45689999999988653 3345556678899999 999999999999997 999999999865421 1111
Q ss_pred cccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh-------hh-ccccCcchHHHHHHHhccc
Q 019298 227 PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK-------YF-DILGDPATFIQVCIMYGCL 298 (343)
Q Consensus 227 ~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~-------~~-~~~~~~~~~~~~a~~~~~l 298 (343)
.+. +.. .-.=+..+++|. +..-...|.++..+. ....+.. .. ...++-+......+ ...|
T Consensus 285 ~~d-f~~-~vDSIsvD~HK~-l~~P~~cgvll~R~~--------~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~l-W~~L 352 (470)
T PLN02263 285 KVT-FKK-PIGSVSVSGHKF-VGCPMPCGVQITRME--------HINVLSSNVEYLASRDATIMGSRNGHAPIFL-WYTL 352 (470)
T ss_pred ccC-CCc-CccEEEECCccc-cCCCcCEEEEEEehh--------hHhhhccChHhhCCCCCCcCCCCCcHHHHHH-HHHH
Confidence 111 111 122455689999 556677888888642 1222211 11 11111111111111 1222
Q ss_pred hh--hHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCCCCceEee
Q 019298 299 ST--IMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKSTGSSLKY 340 (343)
Q Consensus 299 ~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~~~~ 340 (343)
+. ...+.+..++..++.+++.+.|+++ |+. +..|.....+|
T Consensus 353 ~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f 396 (470)
T PLN02263 353 NRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVF 396 (470)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEE
Confidence 21 1334447777777888888899888 565 55665544433
No 300
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.51 E-value=3.4e-12 Score=127.79 Aligned_cols=162 Identities=12% Similarity=0.087 Sum_probs=128.1
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChH----HHHHHHHHHhcCC-CC----eEEEeCCCCcchHHHHHhcCceeEEe
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCT----QAIDVAMALLSRP-GA----NILLPRPGFPIYELSAAFRHIEVRHF 151 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~----~al~~~~~~l~~~-gd----~vl~~~p~~~~~~~~~~~~g~~~~~~ 151 (343)
++|+.+++++ | .++|.++++++ .++.++++.+.++ || +|+++...|+.....+...|.+++.+
T Consensus 572 ~~r~~la~i~----g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v 643 (993)
T PLN02414 572 DLGDLLCEIT----G----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVV 643 (993)
T ss_pred HHHHHHHHHh----C----CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEe
Confidence 4555555555 2 39999999988 8999999998865 88 89999999999999999999999999
Q ss_pred ecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcc
Q 019298 152 DLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM 228 (343)
Q Consensus 152 ~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~ 228 (343)
+.+. +..+|+++|++.+++ ++++|++++|+|-+|.. +++++|+++|+++|+++++|.++.....+ ....
T Consensus 644 ~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e---~~I~eI~~iah~~Galv~vDgAq~~a~~~---l~~p 715 (993)
T PLN02414 644 GTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYE---EGIDEICDIIHDNGGQVYMDGANMNAQVG---LTSP 715 (993)
T ss_pred ccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCcccccc---chHHHHHHHHHHcCCEEEEEecCHHhccC---cCCc
Confidence 8863 447999999999984 67889999999999999 77899999999999999999998542111 1111
Q ss_pred cccCCCCCEEEEccCccccC----CCCCcEEEEEEeC
Q 019298 229 GVFGSTVPILTLGSLSKRWI----VPGWRLGWFVTTD 261 (343)
Q Consensus 229 ~~~~~~~~~i~~~S~sK~~~----~~G~r~G~i~~~~ 261 (343)
..+ +-.++++|.+|+|+ ..|..+|++.+..
T Consensus 716 ~~~---GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~ 749 (993)
T PLN02414 716 GFI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 749 (993)
T ss_pred ccc---CCCEEEecCCccCCcCcccCCCCeeeEEEch
Confidence 222 23489999999876 3456689987743
No 301
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.49 E-value=5.8e-13 Score=105.42 Aligned_cols=115 Identities=17% Similarity=0.288 Sum_probs=86.1
Q ss_pred cHHHHHHHHHh-hccccccccceeEeccCCCCCC-------------CCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298 16 TIKGMLSLLMQ-SVDDEKNEKKVISLAMGDPTVH-------------SCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL 81 (343)
Q Consensus 16 ~~~~~~~~~~~-~~~~~~~~~~~i~l~~g~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~ 81 (343)
+.+.....+.. .+++..++.++|+|+.++..+. +.+.+++.+.+++++. ..|.+..|.++
T Consensus 23 ~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~~~ 96 (153)
T PLN02994 23 PYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGLAN 96 (153)
T ss_pred hHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCcHH
Confidence 33443344444 4666678999999999873210 1122223333333331 34888899999
Q ss_pred HHHHHHHHHhhhCC--CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc
Q 019298 82 TRRAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI 136 (343)
Q Consensus 82 lr~~ia~~~~~~~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~ 136 (343)
||+++++|+.+++| ..+++++|++|+|+++++..+++.++++||.|++++|+|+.
T Consensus 97 lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 97 FRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 99999999999888 66889999999999999999999999999999999999973
No 302
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.49 E-value=1.5e-11 Score=112.53 Aligned_cols=265 Identities=14% Similarity=0.082 Sum_probs=162.3
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEecChHHHHHHHHHHhcC--------C
Q 019298 57 ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-----PNDVFVTSGCTQAIDVAMALLSR--------P 123 (343)
Q Consensus 57 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~~~~g~~~al~~~~~~l~~--------~ 123 (343)
+-+.+...+..+ ...|...+...++++.+.+|+.+.+|.+.. ...=++|+|+++++..++.+..+ .
T Consensus 56 ~~~~l~~~~n~n-~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~ 134 (373)
T PF00282_consen 56 LADLLASALNQN-GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAK 134 (373)
T ss_dssp HHHHHHHHHT-B-TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccc-ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhc
Confidence 344445555433 334554456788999999999998887621 23568899999999887755421 1
Q ss_pred C------CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---C--ce-EEEEeCCCCCcccccC
Q 019298 124 G------ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---N--TV-ALVIINPGNPCGNVYS 191 (343)
Q Consensus 124 g------d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~--~~-~i~~~~p~nptG~~~~ 191 (343)
| -.|++.+-+|.+....+..+|+.++.+++++ ++.+|+++|++.+.. . +. .|+.+-+...||.+
T Consensus 135 ~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~-- 210 (373)
T PF00282_consen 135 GVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI-- 210 (373)
T ss_dssp TTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB--
T ss_pred ccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccc--
Confidence 1 2567777799999999999999999999875 567999999987753 2 33 44555668899999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 270 (343)
+++++|.++|+++++++.+|.+|++..+-.+.... ...++. -.=+..+++|.+ ..-...|+++..++. .
T Consensus 211 -D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~--adSit~d~HK~l-~~P~~~~~~l~r~~~------~ 280 (373)
T PF00282_consen 211 -DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIER--ADSITIDPHKWL-GVPYGCGVLLVRDKS------D 280 (373)
T ss_dssp --SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGG--ESEEEEETTTTT-S-SSS-EEEEESSGG------G
T ss_pred -cCHHHHhhhccccceeeeeccccccccccccccccccccccc--ccccccchhhhh-cCCccceeEEeeccc------c
Confidence 99999999999999999999999984332111111 111111 113456899995 455678999886532 1
Q ss_pred HHHHHhhh----h-------------ccccCcchHHHHHH-Hhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 271 VVERMKKY----F-------------DILGDPATFIQVCI-MYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 271 ~~~~l~~~----~-------------~~~~~~~~~~~~a~-~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
+...+... . ..+...+. ...++ ....|+. ...+.+..++..+..+.+.+.|++.+++++
T Consensus 281 l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el 359 (373)
T PF00282_consen 281 LRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFEL 359 (373)
T ss_dssp HHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred hHHHhccChhhhcccccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 22222100 0 01112222 12222 1222221 122333777778888999999999988885
Q ss_pred eC-CCCce
Q 019298 331 FK-STGSS 337 (343)
Q Consensus 331 ~~-~~~g~ 337 (343)
.. |+-+.
T Consensus 360 ~~~~~~~~ 367 (373)
T PF00282_consen 360 VNEPDLNI 367 (373)
T ss_dssp SSTTSSSE
T ss_pred EcCCCceE
Confidence 44 44433
No 303
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.49 E-value=9.8e-12 Score=116.84 Aligned_cols=264 Identities=16% Similarity=0.092 Sum_probs=159.2
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++++||+..|.-.. .++ .+|.+.++++++++.... +.. ..+.+..+++.+..... ..+.+.+++++++|
T Consensus 98 G~~yiD~~~g~g~~--~lGh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA 167 (474)
T PLN02482 98 GNEYIDYVGSWGPA--IIGHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTEA 167 (474)
T ss_pred CCEEEEeccccccc--ccCCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHHH
Confidence 88899998876331 233 689999999999986532 221 12455556666654322 24799999999999
Q ss_pred HHHHHHHhcC--CCCeEEEeCCCCcchHHHHH-hcCceeE--------EeecCC-CC----CCCCCHHHHHhhhcC--Cc
Q 019298 113 IDVAMALLSR--PGANILLPRPGFPIYELSAA-FRHIEVR--------HFDLLP-DK----GWEVDLDDIESLADQ--NT 174 (343)
Q Consensus 113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~-~~g~~~~--------~~~~~~-~~----~~~~d~~~l~~~~~~--~~ 174 (343)
...+++.... ...+|+...-+|+++..... ..+.... .++... .+ .+ -|++.+++.+.. +.
T Consensus 168 ~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~~~ 246 (474)
T PLN02482 168 CMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANKGE 246 (474)
T ss_pred HHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCCCc
Confidence 9999887531 23688888888887643211 1100000 000000 00 01 167888887753 23
Q ss_pred eEEEEeCC-CCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298 175 VALVIINP-GNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (343)
Q Consensus 175 ~~i~~~~p-~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 252 (343)
.+.++..| ....|.+.+ .+.+++|.++|++||+++|+||++.++ ..+.. .....++-.+. + .+++|.++ .|+
T Consensus 247 iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~-ga~~~~gv~PD-i--~t~gK~lg-gG~ 320 (474)
T PLN02482 247 IAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYG-GAQEYFGITPD-L--TTLGKVIG-GGL 320 (474)
T ss_pred eEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcc-hHhHHhCCCCC-E--EEecchhh-CCC
Confidence 44555666 566787654 788999999999999999999999877 33321 11111222222 3 36799976 679
Q ss_pred cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298 253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~ 324 (343)
.+|.++++ +++.+.+... ...+++.++++.+++ .+.|+...+ .+..++++++-+.+.+.|++
T Consensus 321 Pigav~g~--------~ei~~~~~~~~~~~~~~T~~gnpl~~aAa-la~L~~l~~-~~~~~~~~~~g~~l~~~L~~ 386 (474)
T PLN02482 321 PVGAYGGR--------REIMEMVAPAGPMYQAGTLSGNPLAMTAG-IHTLKRLQQ-PGTYEYLDKITKKLIQGILE 386 (474)
T ss_pred ceEEEEEc--------HHHHHhhccCCCcccccCcchhHHHHHHH-HHHHHHHhc-cCHHHHHHHHHHHHHHHHHH
Confidence 99999774 3677766421 122444567766665 444332110 01556666666666666554
No 304
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.49 E-value=1.1e-11 Score=115.49 Aligned_cols=267 Identities=15% Similarity=0.095 Sum_probs=155.8
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+++.++|+..|.-. ..++ .+|.+.+++++++.... ...|.. .+.+..+|+.+.... +-..+.++++++++
T Consensus 73 dG~~ylD~~~g~~~--~~lGh~hp~v~~Av~~ql~~l~~~~~~~~----~~~~~~lAe~L~~~~--p~~~~~v~f~~SGs 144 (442)
T TIGR03372 73 QGNEFIDCLGGFGI--FNVGHRNPNVIAAVENQLAKQPLHSQELL----DPLRALLAKTLAALT--PGKLKYSFFCNSGT 144 (442)
T ss_pred CCCEEEECCccHHh--hhcCCCCHHHHHHHHHHHHhCCCcccccC----CHHHHHHHHHHHHhC--CCCcCEEEEeCCch
Confidence 38889999877422 1233 78999999999987532 222222 233444455443322 11236789999999
Q ss_pred HHHHHHHHHhcC----CC-CeEEEeCCCCcchHHHHHhcCceeE----EeecCCCCC--CCCCHHHHHhhhcC-----Cc
Q 019298 111 QAIDVAMALLSR----PG-ANILLPRPGFPIYELSAAFRHIEVR----HFDLLPDKG--WEVDLDDIESLADQ-----NT 174 (343)
Q Consensus 111 ~al~~~~~~l~~----~g-d~vl~~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~--~~~d~~~l~~~~~~-----~~ 174 (343)
+|++.+++.... .| .+|+...-+|++....+........ ..++.+.-. --.|.+.+++.+.. +.
T Consensus 145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~ 224 (442)
T TIGR03372 145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDD 224 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCc
Confidence 999999987532 23 5788888888776554443321110 011111000 01256666665531 22
Q ss_pred eEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-
Q 019298 175 VALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG- 251 (343)
Q Consensus 175 ~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G- 251 (343)
.+.++..| ....|... +++.++++.++|++||+++|+||++.++...+.. .....++-.+. |+ +++|.++ .|
T Consensus 225 vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PD-iv--t~gK~lg-~G~ 299 (442)
T TIGR03372 225 VAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM-FACEHEGVQPD-IL--CLAKALG-GGV 299 (442)
T ss_pred EEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc-hhhhhcCCCCC-ee--eehhhhc-CCc
Confidence 34455555 66677765 6789999999999999999999999876544431 12222222222 33 4899975 57
Q ss_pred CcEEEEEEeCCCCCCCchHHHHHHhhh---hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhcC
Q 019298 252 WRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~~ 324 (343)
+.+|.+++++ ++.+.+... ...+++.++++.+++ .+.|+. +.+ ..++.+++-+++.+.|++
T Consensus 300 ~Pigavv~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaa-~a~L~~---i~~~~l~~~~~~~G~~l~~~L~~ 365 (442)
T TIGR03372 300 MPIGATIATE--------AVFSVLFDNPFLHTTTFGGNPLACAAA-LATINE---LLEKNLPAQAAIKGDFLLDGFQQ 365 (442)
T ss_pred ccceEEEecH--------HHHHhhhccCccccCCCCCCHHHHHHH-HHHHHH---HHhccHHHHHHHHHHHHHHHHHH
Confidence 6899988753 566666321 222445577777666 444321 111 445555555555555543
No 305
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.48 E-value=1.4e-11 Score=112.24 Aligned_cols=232 Identities=16% Similarity=0.147 Sum_probs=145.4
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
+++.++|+..|.-. ..++ .+|.+.+++++++++... ..|.. ....++.+.++++. ..+.+++++++
T Consensus 22 dG~~ylD~~~g~~~--~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~SG 90 (364)
T PRK04013 22 QGRRYLDLIAGIGV--NVLGHNHPEWVEEMSEQLEKLVVAGPMFEH-EEKEEMLEELSKWV--------NYEYVYMGNSG 90 (364)
T ss_pred CCCEEEEcccChhh--ccCCCCCHHHHHHHHHHHHhcCCccCCcCC-HHHHHHHHHHHhhc--------CCCEEEEeCch
Confidence 38899999887533 1233 678999999999876321 12221 22234444444443 24689999999
Q ss_pred HHHHHHHHHHhc-CCC-CeEEEeCCCCcchHHHHHhc-CceeE---EeecCCC---CCCCCCHHHHHhhhcCCceEEEEe
Q 019298 110 TQAIDVAMALLS-RPG-ANILLPRPGFPIYELSAAFR-HIEVR---HFDLLPD---KGWEVDLDDIESLADQNTVALVII 180 (343)
Q Consensus 110 ~~al~~~~~~l~-~~g-d~vl~~~p~~~~~~~~~~~~-g~~~~---~~~~~~~---~~~~~d~~~l~~~~~~~~~~i~~~ 180 (343)
++|++.+++... .+| ++|+..+-+|.+....+... +.... .-+..++ ..+ .|.+.+++.+.+++.++++.
T Consensus 91 seA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-~d~~~l~~~i~~~~aAvivE 169 (364)
T PRK04013 91 TEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-NDVEAAKEAITKETAAVIFE 169 (364)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-CCHHHHHHHhcCCcEEEEEc
Confidence 999999998764 234 78999999998765443331 11000 0000000 011 26788888887677776665
Q ss_pred CCCCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 181 NPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 181 ~p~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
......|.. .+.+.++++.++|++||+++|+||++.++ ..+.- .....++-.++++ +++|.++. |+.+|.++.
T Consensus 170 pi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~-~a~~~~gv~PDiv---~~gK~lgg-G~P~~a~~~ 243 (364)
T PRK04013 170 PIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKF-LAIEHYKVEPDIV---TMGKGIGN-GVPVSLTLT 243 (364)
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCch-hHHHhcCCCCCEE---EecccccC-CceeEEEEe
Confidence 556555664 56788999999999999999999999987 44431 1222222222333 45999765 799999887
Q ss_pred eCCCCCCCchHHHHHHhhhhccccCcchHHHHHH
Q 019298 260 TDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~ 293 (343)
+. ++ .. .....++..++.+.+++
T Consensus 244 ~~--------~~-~~--~~~~~T~~gnp~~~aaa 266 (364)
T PRK04013 244 NF--------DV-ER--GKHGSTFGGNPLACKAV 266 (364)
T ss_pred cc--------cc-cC--CCcCCCCCcCHHHHHHH
Confidence 53 22 11 12233566778877777
No 306
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.48 E-value=4.2e-11 Score=105.46 Aligned_cols=268 Identities=16% Similarity=0.136 Sum_probs=170.4
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
....|+|--.+ .-.++.+++++-..+.+.-..+||- ....+++++...+..++.||. +.-+|...+
T Consensus 25 q~~~ieLIASE------N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga--~~anVQPhS 96 (413)
T COG0112 25 QREHIELIASE------NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGA--EYANVQPHS 96 (413)
T ss_pred Hhhceeeeecc------ccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCC--CccccCCCC
Confidence 44667776555 2367899999888776543334432 223355666666666655553 445666667
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH---HHhcC--ceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeC
Q 019298 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRH--IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIIN 181 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~ 181 (343)
| +.|...++.+|++|||+|+-.+-.++++..- ....| .+++.++++++ +..+|.|++++...+ +|++|+.-.
T Consensus 97 G-s~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~kPK~ii~G~ 174 (413)
T COG0112 97 G-SQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEVKPKLIIAGG 174 (413)
T ss_pred c-hHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHhCCCEEEECc
Confidence 6 5667778889999999999887777554321 12223 34555666543 457999999997765 677766533
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~ 260 (343)
...|- . -+++++.++|.+-|.++++|.+|-. ++-++.-+.++... .++.+|.+|+ +.|.|-|.|++.
T Consensus 175 SaY~r--~---id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~A-----dvVTtTTHKT--lrGPrGG~Il~~ 242 (413)
T COG0112 175 SAYSR--P---IDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHA-----DVVTTTTHKT--LRGPRGGIILTN 242 (413)
T ss_pred ccccc--c---cCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCcc-----ceEeCCcccC--CCCCCceEEEec
Confidence 32332 2 2567778888899999999999984 44444433343321 2999999999 688889998885
Q ss_pred CCCCCCCchHHHHHHhhhh-cc-ccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298 261 DPCGMFRKPKVVERMKKYF-DI-LGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELINFK 332 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~ 332 (343)
+ .++.+++.... .. .+++.....++. ..++.+ ..++-+..+++.++...|.+.|... |+.++.
T Consensus 243 ~-------eel~kkin~aVFPg~qggpl~HviAak-aVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvs 309 (413)
T COG0112 243 D-------EELAKKINSAVFPGLQGGPLMHVIAAK-AVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVS 309 (413)
T ss_pred c-------HHHHHHhhhhcCCccCCChHHHHHHHH-HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEec
Confidence 3 46888887643 21 222222222222 222221 1334447888889999999999887 888543
No 307
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.47 E-value=4.9e-13 Score=115.78 Aligned_cols=216 Identities=18% Similarity=0.177 Sum_probs=132.5
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC------CCeEEEeCCCCcchHHHHHhcCceeEEee
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP------GANILLPRPGFPIYELSAAFRHIEVRHFD 152 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~ 152 (343)
.++|.+.|.+++....+.-.+...|++++|+++.++.++.+|... --.|+...|.|+.|.............+.
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 478999999988776665566679999999999999999999532 14799999999999877666554444443
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
-+. ..|. ..-+..+-+=++++||||.|.. .+.++ +.-+..+|.|-||..-.|.. +..
T Consensus 125 Gda-~~~~-------~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTp-----I~~-- 181 (363)
T PF04864_consen 125 GDA-SNFK-------NSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTP-----ITA-- 181 (363)
T ss_dssp EEC-CCGT-------T-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS--------S--
T ss_pred ccH-Hhhc-------cCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccccc-----cCC--
Confidence 322 1111 1111234455899999999987 33343 45567789999999844432 221
Q ss_pred CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhH---------
Q 019298 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIM--------- 302 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~--------- 302 (343)
+.+..|.++|+||.-|-+|-|+||.++.| .++.++|...... +.+++.-+|.-+ ..+|....
T Consensus 182 ~aD~DiMLFT~SK~TGHAGSR~GWAlVKD-------~~Va~kM~~y~~lnTiGvS~dsQLRa-~kiLk~v~~~~~~~~~~ 253 (363)
T PF04864_consen 182 PADHDIMLFTLSKLTGHAGSRFGWALVKD-------EEVAKKMTKYMELNTIGVSRDSQLRA-LKILKVVLDGYGTEKGT 253 (363)
T ss_dssp -B--SEEEEEHHHHCS-GGG-EEEEEES--------HHHHHHHHHHHHHHCSS--HHHHHHH-HHHHHHHHHHCCHHTTT
T ss_pred CCCCceEEEEEecccCccccccceeeecC-------HHHHHHHHHHHHHhcccCcHHHHHHH-HHHHHHHHhcccCCCCc
Confidence 12334999999999999999999999964 6788888877543 567888888766 34443210
Q ss_pred -HHHH-HHHHHHHHHHHHHHhhcCC
Q 019298 303 -QIMI-HGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 303 -~~l~-~~~~~~~~~~~~~~~L~~~ 325 (343)
.+.+ -++.+++|.+.+.+.+..-
T Consensus 254 ~~~F~f~~~~M~~RW~~L~~~~~~S 278 (363)
T PF04864_consen 254 EDIFHFGYSTMRERWEKLRAAVSAS 278 (363)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhc
Confidence 1333 6677888888888888764
No 308
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.47 E-value=1.9e-11 Score=114.81 Aligned_cols=268 Identities=15% Similarity=0.106 Sum_probs=157.1
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++++|+..|.-. ..++ .+|.+.+++++++..... ..|-. .+.+..+++.+.... +-..+.+++++++++
T Consensus 81 G~~ylD~~~g~~~--~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~----~~~~~~lae~L~~~~--p~~~~~v~f~~SGsE 152 (459)
T PRK11522 81 GQEFIDCLGGFGI--FNVGHRNPVVVSAVQNQLAKQPLHSQELL----DPLRAMLAKTLAALT--PGKLKYSFFCNSGTE 152 (459)
T ss_pred CCEEEECCcCHHh--hhcCCCCHHHHHHHHHHHhhCcccccccC----CHHHHHHHHHHHHhC--CCCCCEEEEeCCchH
Confidence 7888999877422 1233 789999999999875321 12222 334444555543322 223468999999999
Q ss_pred HHHHHHHHhcC----CC-CeEEEeCCCCcchHHHHHhc-CceeEE---eecCCCCC--CCCCHHHHHhhhcC-----Cce
Q 019298 112 AIDVAMALLSR----PG-ANILLPRPGFPIYELSAAFR-HIEVRH---FDLLPDKG--WEVDLDDIESLADQ-----NTV 175 (343)
Q Consensus 112 al~~~~~~l~~----~g-d~vl~~~p~~~~~~~~~~~~-g~~~~~---~~~~~~~~--~~~d~~~l~~~~~~-----~~~ 175 (343)
|++.+++.... +| ..|+...-+|++....+... +..... .+..+.-. .-.|.+.+++.+.. +..
T Consensus 153 Ave~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i 232 (459)
T PRK11522 153 SVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDV 232 (459)
T ss_pred HHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcE
Confidence 99999987531 22 46888888887765444332 211111 11111000 00257777776642 223
Q ss_pred EEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-C
Q 019298 176 ALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-W 252 (343)
Q Consensus 176 ~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~ 252 (343)
+.++..| ....|.. .+.+.++++.++|++||+++|+||++.++...+.. .....++-.+. |+ +++|.++ .| +
T Consensus 233 AavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PD-iv--t~gK~lg-gG~~ 307 (459)
T PRK11522 233 AAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKM-FACEHENVQPD-IL--CLAKALG-GGVM 307 (459)
T ss_pred EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchh-hhhhccCCCCC-EE--Eechhhh-CCCc
Confidence 4455555 6667776 46778999999999999999999999876444431 11122222222 33 7899975 46 6
Q ss_pred cEEEEEEeCCCCCCCchHHHHHHhhh---hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298 253 RLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 253 r~G~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~ 324 (343)
.+|.+++.+ ++.+.+... ...++..++.+.+++ .+.|+...+ .+..++++++-+.+.+.|++
T Consensus 308 Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaa-la~L~~i~~-~~l~~~~~~~g~~l~~~L~~ 372 (459)
T PRK11522 308 PIGATIATE--------EVFSVLFDNPFLHTTTFGGNPLACAAA-LATINVLLE-QNLPAQAEQKGDYLLDGFRQ 372 (459)
T ss_pred cceeEEEcH--------HHHHHhccCCcccCCCCCCCHHHHHHH-HHHHHHHhc-chHHHHHHHHHHHHHHHHHH
Confidence 899988853 566655321 222445577776666 444432110 01556666666666666654
No 309
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.46 E-value=8.2e-12 Score=120.66 Aligned_cols=166 Identities=13% Similarity=0.147 Sum_probs=117.4
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH-HHhcCceeEEeecCCCC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-AAFRHIEVRHFDLLPDK 157 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~~~ 157 (343)
..+..+.+|+.|+ .....++++|+|.++..++.+++.+||+|++++.||-+..+. +...|+..+++...- +
T Consensus 176 i~eAq~~AA~~fg-------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~-n 247 (720)
T PRK13578 176 AKDAQKHAAKVFN-------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR-N 247 (720)
T ss_pred HHHHHHHHHHHhC-------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc-c
Confidence 3566677777773 234667899999999999999999999999999999998885 788999999987544 2
Q ss_pred CCC----CCH-----HHHHhhhcCC----------ceEEEEeCCCCCcccccCHHHHHHHHHH-HhhcCcEEEEccCCCc
Q 019298 158 GWE----VDL-----DDIESLADQN----------TVALVIINPGNPCGNVYSYQHLQKLAET-ANKLKTLVIADEVYGH 217 (343)
Q Consensus 158 ~~~----~d~-----~~l~~~~~~~----------~~~i~~~~p~nptG~~~~~~~l~~l~~~-~~~~~~~~i~D~ay~~ 217 (343)
.++ ++. +.+++++.+. .+++++++|+. .|.+++ +++|+++ ++.++ .+++||||+.
T Consensus 248 ~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 248 PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCcchh
Confidence 333 354 4477777543 36777777754 788854 5677776 56777 9999999997
Q ss_pred c-ccCCC--CCCcc-cccCC-CCCEEEEccCccccCCCCCcEEEEEE
Q 019298 218 L-VFGDK--PFVPM-GVFGS-TVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 218 ~-~~~~~--~~~~~-~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
. .|... ..++. ..... +.-++++.|.+|. ++++.-+.++-
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~LH 367 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQIH 367 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhhh
Confidence 5 33321 12211 11222 3457999999999 67776676543
No 310
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.45 E-value=2.7e-11 Score=112.91 Aligned_cols=266 Identities=13% Similarity=0.026 Sum_probs=152.7
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|.-. ..++ .+|.+.+++++++.......+. .+.+..+++.+.... +...+.+.+++++++
T Consensus 51 dG~~yiD~~~g~~~--~~lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~L~~~~--~~~~~~v~f~~SGsE 121 (433)
T PRK00615 51 LGKTFIDFCGSWGS--LIHGHSHPKICDAIQQGAERGTSYGLT-----SEQEILFAEELFSYL--GLEDHKIRFVSSGTE 121 (433)
T ss_pred CCCEEEEcccchhc--cccCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhC--CCCcCEEEEeCchHH
Confidence 38899999888633 1233 7899999999998764321221 123344444443322 222368999999999
Q ss_pred HHHHHHHHhcC--CCCeEEEeCCCCcchHHH---HHhcCc-e---e-EEeecCCCCC-----CCCCHHHHHhhhcC--Cc
Q 019298 112 AIDVAMALLSR--PGANILLPRPGFPIYELS---AAFRHI-E---V-RHFDLLPDKG-----WEVDLDDIESLADQ--NT 174 (343)
Q Consensus 112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~---~~~~g~-~---~-~~~~~~~~~~-----~~~d~~~l~~~~~~--~~ 174 (343)
|++.+++.... ...+|+...-+|+++... ....+. . . ......+... ..-|++.+++.+.. +.
T Consensus 122 A~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 201 (433)
T PRK00615 122 ATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHR 201 (433)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCc
Confidence 99999987642 235788888888775421 111110 0 0 0000000000 00167888887743 22
Q ss_pred eEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298 175 VALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (343)
Q Consensus 175 ~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 252 (343)
.+.++..| ....|... +.+.+++|.++|++||+++|+||++.++. .+.. .....++-.+. |+ +++|.++ .|.
T Consensus 202 ~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R-~G~~-ga~~~~gv~PD-i~--~~gK~lg-gG~ 275 (433)
T PRK00615 202 VAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFR-VAQG-GAAAIYHVKPD-IT--VYGKILG-GGL 275 (433)
T ss_pred eEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccc-ccHh-HHHHhcCCCCC-eE--EEccccc-CCc
Confidence 34455556 55667765 57889999999999999999999998763 3321 11111222222 33 4899975 568
Q ss_pred cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 019298 253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYK 323 (343)
Q Consensus 253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~ 323 (343)
.+|+++++. ++.+.+... ...++..++...+++ .+.|+...+ -+.+++++++-+.+.+.|+
T Consensus 276 p~~av~~~~--------~i~~~~~~~~~~~~~~T~~g~p~~~aa~-la~L~~i~~-~~~~~~~~~~g~~l~~~l~ 340 (433)
T PRK00615 276 PAAAVVAHK--------SIMDHLAPEGTIFQAGTLSGNPLAMAAG-KASINLCRE-QGFYTQLSTLEQNFLSPIE 340 (433)
T ss_pred ceeeeeecH--------HHHhhhcCCCCcccCCCCcccHHHHHHH-HHHHHHHhc-ccHHHHHHHHHHHHHHHHH
Confidence 889998853 677766432 112344577766666 444431100 0145555555555544443
No 311
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.45 E-value=3.8e-11 Score=112.31 Aligned_cols=266 Identities=16% Similarity=0.094 Sum_probs=158.3
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|.-.. .++ .+|.+.+++++++.......+. .+.+..+++.+..... ..+.+++++++++
T Consensus 51 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~l~~~~p---~~~~v~f~~sGse 120 (428)
T PRK12389 51 DGNKYIDYLAAYGPI--ITGHAHPHITKAITEAAENGVLYGTP-----TELEIEFAKMLKEAIP---SLEKVRFVNSGTE 120 (428)
T ss_pred CCCEEEEcccccccc--ccCCCCHHHHHHHHHHHHhCCccCCC-----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHH
Confidence 388899998886332 233 7899999999998764322221 2334445555543221 2479999999999
Q ss_pred HHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-CceeE--------EeecC-CCCC---CCCCHHHHHhhhcC--Cc
Q 019298 112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HIEVR--------HFDLL-PDKG---WEVDLDDIESLADQ--NT 174 (343)
Q Consensus 112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~~~~--------~~~~~-~~~~---~~~d~~~l~~~~~~--~~ 174 (343)
|++.+++.... ...+|+...-+|++....+... +.... .++.. ..+. ...|++.+++.+.. +.
T Consensus 121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 200 (428)
T PRK12389 121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDE 200 (428)
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCc
Confidence 99999987532 2367888888887765443332 21110 00000 0000 01267888887742 22
Q ss_pred eEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298 175 VALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (343)
Q Consensus 175 ~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 252 (343)
.+.++..| .+..|.+. +.+.+++|.++|++||+++|+||++.++.. +.. .....++-.++ | .+++|.++ .|+
T Consensus 201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt-~~~-~a~~~~gv~PD-i--vt~gK~lg-gG~ 274 (428)
T PRK12389 201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRF-MYG-GAQDLLGVEPD-L--TALGKIIG-GGL 274 (428)
T ss_pred EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccccc-Ccc-hhhHHhCCCCC-e--eeechhhc-CCC
Confidence 34444555 66677664 678999999999999999999999998732 211 01111121222 3 36799974 579
Q ss_pred cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298 253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~ 324 (343)
.+|.++++ +++.+.+... ...++..++++.+++ .+.|+...+ .+..++++++-+++.+.|++
T Consensus 275 Pi~av~~~--------~~i~~~~~~~~~~~~~~T~~gnpl~~Aaa-la~L~~l~~-~~l~~~~~~~g~~l~~~L~~ 340 (428)
T PRK12389 275 PIGAYGGR--------KDIMEQVAPLGPAYQAGTMAGNPASMAAG-IACLEVLQQ-EGVYEKLDRLGAMLEEGILE 340 (428)
T ss_pred ceeEEeEH--------HHHHhhhccCCCcccccCCccCHHHHHHH-HHHHHHHhc-ccHHHHHHHHHHHHHHHHHH
Confidence 99999874 3677766421 222456677776666 444432100 01555666666666665553
No 312
>PRK06105 aminotransferase; Provisional
Probab=99.44 E-value=3.5e-11 Score=113.26 Aligned_cols=269 Identities=17% Similarity=0.135 Sum_probs=157.7
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+++.++||..|.-.. .++ .+|++.+++++++++.. .+... ....+.+..+++.+.+.. +-..+.++++++++
T Consensus 46 dG~~ylD~~~g~~~~--~lGh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGs 119 (460)
T PRK06105 46 AGKRYIEGMAGLWSV--ALGFSEQRLVEAAARQMKKLPFYHTFS--HKSHGPVIDLAEKLVAMA--PVPMSKVFFTNSGS 119 (460)
T ss_pred CCCEEEEcchhHHhc--cCCCCCHHHHHHHHHHHHhCCCeeccc--ccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCcH
Confidence 388999998886332 233 68999999999987532 11110 112233444555554322 22346899999999
Q ss_pred HHHHHHHHHhc------C-C-CCeEEEeCCCCcchHHHHHhc-Cce------------eEEeecCCCCCCCC--------
Q 019298 111 QAIDVAMALLS------R-P-GANILLPRPGFPIYELSAAFR-HIE------------VRHFDLLPDKGWEV-------- 161 (343)
Q Consensus 111 ~al~~~~~~l~------~-~-gd~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~~~~~~~-------- 161 (343)
+|++.+++... . + ..+|+...-+|++....+... +.. +..++.. +.+..
T Consensus 120 eAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~ 197 (460)
T PRK06105 120 EANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCP--HYYRFGLPGESEE 197 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCC--cccccccCCCChH
Confidence 99999998752 1 2 257888888887654333221 111 1111111 10000
Q ss_pred -----CHHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc
Q 019298 162 -----DLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231 (343)
Q Consensus 162 -----d~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~ 231 (343)
..+++++.+. .+..+.++.-| ....|.. .+.+.++++.++|++||+++|+||++.++...+.-. ....+
T Consensus 198 ~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f-~~~~~ 276 (460)
T PRK06105 198 AFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMF-GCETF 276 (460)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhh-hHHhc
Confidence 1345666653 23334555556 5666766 588999999999999999999999998875444321 12222
Q ss_pred CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHH
Q 019298 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQ 303 (343)
Q Consensus 232 ~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~ 303 (343)
+-.++ | .+++|.++...+.+|.+++++ ++.+.+... ...+++.++++.+++ .+.|+ .
T Consensus 277 ~v~PD-i--~~~gK~lggG~~P~~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa-~a~L~---~ 341 (460)
T PRK06105 277 GIKPD-I--LVMSKQLSSSYQPLSAVLMNE--------KVYDPIADESGKIGTFGHGFTASGHPVAAAVA-LENLA---I 341 (460)
T ss_pred CCCCC-e--eeeecccccCcccceEEEEcH--------HHHHHHhcccccCcccccCCCCCCCHHHHHHH-HHHHH---H
Confidence 22222 2 367999765446899999853 566666431 123556777777666 34332 1
Q ss_pred HHH--HHHHHHHHHHHHHHhhcCC
Q 019298 304 IMI--HGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 304 ~l~--~~~~~~~~~~~~~~~L~~~ 325 (343)
+.+ ..++.+++-+.+.+.|+++
T Consensus 342 i~~~~l~~~v~~~g~~l~~~L~~l 365 (460)
T PRK06105 342 IEERDLVGNAAERGARLQARLRAL 365 (460)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHh
Confidence 212 5566666666666655543
No 313
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.44 E-value=3.1e-11 Score=109.73 Aligned_cols=245 Identities=12% Similarity=-0.003 Sum_probs=153.9
Q ss_pred CcHHHHHHHHHHHhc---CCCCCCCCCCCCH---HHHHHHHHHHhhhCCCCCCCCcEEEecC-hHHHHHHHHHHhcCCCC
Q 019298 53 TTHVATEAVAEALLS---EKFNGYAPTAGLP---LTRRAIAEYLSRDLPYKLTPNDVFVTSG-CTQAIDVAMALLSRPGA 125 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~---~lr~~ia~~~~~~~~~~~~~~~i~~~~g-~~~al~~~~~~l~~~gd 125 (343)
.|..+.+++.+.+.+ .....|....-.+ ++-+.+.+.+++.++. -..++|++++| ++.+++.++..+..+|+
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~-~~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNI-PDNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCC-CCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 467788888888763 1222332222223 3333333333333332 12347888866 99999999999998999
Q ss_pred eEEEeCCCCcc--hHHHHHhcCceeEEeecCCC--CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHH
Q 019298 126 NILLPRPGFPI--YELSAAFRHIEVRHFDLLPD--KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201 (343)
Q Consensus 126 ~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 201 (343)
++++..-+..+ +...++..|. +..+...+. .+..+++++++. +++++.|.+++..+.||+..+ ++
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~th~ETstGv~~~--------~l 150 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--SEDAAYVHYCANETIHGVEFR--------EL 150 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--CCCCCEEEEcCCCCcccEecc--------ee
Confidence 98877666643 3556777788 666654322 223456665552 457889999999999999864 55
Q ss_pred HhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh----
Q 019298 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK---- 277 (343)
Q Consensus 202 ~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~---- 277 (343)
++.+++++++|.+.+.. ..+..+..+ + +++.|..|.||.+| +|.+.+++ +.++++..
T Consensus 151 ~~~~~~l~iVDavss~g----~~~id~~~~---d--~~~~ssqK~lgP~G--lg~l~~s~--------~~~~~~~~~~~~ 211 (349)
T TIGR01364 151 PDVKNAPLVADMSSNIL----SRPIDVSKF---G--LIYAGAQKNIGPAG--LTVVIVRK--------DLLGRASRITPS 211 (349)
T ss_pred cccCCCeEEEEcccccc----CccCCHHHc---c--EEEEecccccCCCc--eEEEEECH--------HHHhhcccCCCC
Confidence 66789999999998862 222333322 2 88899999998777 78888764 33332211
Q ss_pred -------h--hccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhhcCCCCce
Q 019298 278 -------Y--FDILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 278 -------~--~~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
. ....+.++.....++ .++|+...+. ++ ..++.++..+.+++.|++++|+.
T Consensus 212 ~~~~~~~~~~~~~~~Tp~~~~i~al-~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~ 274 (349)
T TIGR01364 212 MLNYKIHAENDSMYNTPPTFAIYVS-GLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFY 274 (349)
T ss_pred cchHHHHHhcCCCCCCCcHHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 1 111223343333443 5555533222 33 88888999999999999997764
No 314
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.44 E-value=1.2e-10 Score=110.53 Aligned_cols=255 Identities=15% Similarity=0.125 Sum_probs=160.2
Q ss_pred HHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCC-C--------CCC--CcEEEecChHHHHHHHHHHhcC-------
Q 019298 61 VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY-K--------LTP--NDVFVTSGCTQAIDVAMALLSR------- 122 (343)
Q Consensus 61 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~-~--------~~~--~~i~~~~g~~~al~~~~~~l~~------- 122 (343)
+...+..+ ...|...+...++++.+.+|+.+..+. + -.+ ..-++|+|+|+++..++....+
T Consensus 110 l~~~lN~n-~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~ 188 (522)
T TIGR03799 110 LMVALNQN-LVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADG 188 (522)
T ss_pred HHHHhcCC-cceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccc
Confidence 44444433 234555567789999999999875431 1 011 2347789999988887655321
Q ss_pred -------------------CCCeEEEeCCCCcchHHHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhc----CCceE
Q 019298 123 -------------------PGANILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLAD----QNTVA 176 (343)
Q Consensus 123 -------------------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~ 176 (343)
++..|++.+-.|.+....+...|+ +++.++++ .++.+|+++|++.++ .+++.
T Consensus 189 ~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d--~~g~~d~~~L~~~i~~~~~~g~~~ 266 (522)
T TIGR03799 189 DFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTD--ANNRIDVDALRDKCAELAEQNIKP 266 (522)
T ss_pred cccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeC--CCCcCCHHHHHHHHHHHHHCCCCc
Confidence 134688889999999999999988 67888875 356799999999885 34444
Q ss_pred EEEe--CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC-cccccCCCCCEEEEccCccccCCCCCc
Q 019298 177 LVII--NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWR 253 (343)
Q Consensus 177 i~~~--~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r 253 (343)
++++ ..++.||.+ +++++|+++|+++|+++++|.+|++...-..... .+..+. .-..++.|.+|.+..| ..
T Consensus 267 ~~vvataGtt~tGai---Dpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle--~aDSit~d~HK~l~~P-~g 340 (522)
T TIGR03799 267 LAIVGVAGTTETGNI---DPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIE--RADSVTIDAHKQLYVP-MG 340 (522)
T ss_pred EEEEEEecCcCCCCc---CCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCch--hCCEEEEChhhcCCcC-cc
Confidence 4443 446799999 7889999999999999999999997432211110 011111 1237788999974332 44
Q ss_pred EEEEEEeCCCCCCCchHHHHHHhhhh--------------ccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHH
Q 019298 254 LGWFVTTDPCGMFRKPKVVERMKKYF--------------DILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGS 317 (343)
Q Consensus 254 ~G~i~~~~~~~~~~~~~~~~~l~~~~--------------~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~ 317 (343)
+|.+++.++ .+.+.+.... .+..+-+..+ ..+ ...|+. ...+-+..++..+..++
T Consensus 341 ~G~llvr~~-------~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~l-w~aL~~lG~~G~~~ii~~~~~la~~ 411 (522)
T TIGR03799 341 AGMVLFKDP-------ALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLV-YAGLHIIGRKGYELLIDQSIEKAKY 411 (522)
T ss_pred cEEEEEeCH-------HHHHHhccCcchhcCCCCCccccceeecCcchHH-HHH-HHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 788888653 3333333210 0111111111 111 222221 12222377788888999
Q ss_pred HHHhhcCCCCceeeCC
Q 019298 318 CVPSYKLIPELINFKS 333 (343)
Q Consensus 318 ~~~~L~~~~g~~~~~~ 333 (343)
+.+.|++.|+++++.+
T Consensus 412 l~~~L~~~~~~el~~~ 427 (522)
T TIGR03799 412 FADLIQQQPDFELVTE 427 (522)
T ss_pred HHHHHhhCCCeEEecC
Confidence 9999999889995443
No 315
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.44 E-value=6e-11 Score=112.54 Aligned_cols=270 Identities=18% Similarity=0.124 Sum_probs=158.0
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++++++||..|.-.... -..+|++.+++++++.+... +.+ ..+..+....+++.+.+.+. +...+.+++++++++
T Consensus 87 dG~~ylD~~sg~~~~~l-Gh~hp~v~~Av~~ql~~~~~~~~~--~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsE 162 (504)
T PLN02760 87 NGKKYLDALAGLWCTAL-GGSEPRLVAAATEQLNKLPFYHSF--WNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSE 162 (504)
T ss_pred CCCEEEEcCcCHHhccc-CCCCHHHHHHHHHHHhhccceecc--cccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHH
Confidence 38899999987633222 23789999999999875321 111 01223445555555433211 122357899999999
Q ss_pred HHHHHHHHhc------C-CC-CeEEEeCCCCcchHHHHHh-cCce------------eEEeecCCCCCCC----------
Q 019298 112 AIDVAMALLS------R-PG-ANILLPRPGFPIYELSAAF-RHIE------------VRHFDLLPDKGWE---------- 160 (343)
Q Consensus 112 al~~~~~~l~------~-~g-d~vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~~~~~---------- 160 (343)
|+..+++... . ++ .+|+..+-+|++....+.. .|.. +..++.. +.+.
T Consensus 163 A~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~ 240 (504)
T PLN02760 163 ANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP--HYWRFHLPGETEEE 240 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC--cccccCCCCCcHHH
Confidence 9999999763 1 22 5788888888765433322 2221 1111110 1000
Q ss_pred ---CCHHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 161 ---VDLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 161 ---~d~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
...+.+++.+. .+..+.++.-| ....|.+ .+.+.+++|.++|++||+++|+||++.+|...+... ....++
T Consensus 241 ~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~-a~e~~g 319 (504)
T PLN02760 241 FSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMF-GCDKYN 319 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhh-HHHhcC
Confidence 01234666553 13344555556 5666766 567899999999999999999999998875444321 122222
Q ss_pred CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh--------hhccccCcchHHHHHHHhccchhhHHH
Q 019298 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--------YFDILGDPATFIQVCIMYGCLSTIMQI 304 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~~~l~~~~~~ 304 (343)
-.+. +.+++|.++...+.+|.++++. ++.+.+.. ....+++.+|++.+++ .+.|+ .+
T Consensus 320 v~PD---ivtlgK~lggG~~PigAv~~~~--------~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaa-la~Le---~i 384 (504)
T PLN02760 320 IKPD---LVSLAKALSSAYMPIGAVLVSP--------EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVA-LEALK---IY 384 (504)
T ss_pred CCCc---EEEecccccCCccccceEeecH--------HHHhhhhcccccccCcccCCCCCCCHHHHHHH-HHHHH---HH
Confidence 2222 3567999754336899988853 56666643 1223556677777776 44432 12
Q ss_pred HH--HHHHHHHHHHHHHHhhcC
Q 019298 305 MI--HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 305 l~--~~~~~~~~~~~~~~~L~~ 324 (343)
.+ ..++++++-+.+.+.|+.
T Consensus 385 ~~~~l~~~~~~~g~~l~~~L~~ 406 (504)
T PLN02760 385 KERNIPEHVNKIAPRFQDGIKA 406 (504)
T ss_pred HhCCHHHHHHHHHHHHHHHHHH
Confidence 12 566666666666666654
No 316
>PRK07046 aminotransferase; Validated
Probab=99.44 E-value=4.6e-11 Score=112.08 Aligned_cols=259 Identities=15% Similarity=0.108 Sum_probs=154.4
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++.+|||..|.-. ..++ .+|.+.++++++++......++ .+....+++.+.+.. ..+.+.+++++++|
T Consensus 74 G~~yiD~~~g~g~--~~lGh~~p~i~~Av~~q~~~~~~~~~~-----~~~~~~lAe~l~~~~----~~~~v~F~nSGtEA 142 (453)
T PRK07046 74 GHRYDDFCLGDTG--AMFGHSPAPVARALAEQARRGLTTMLP-----SEDAAWVGEELARRF----GLPYWQVATTATDA 142 (453)
T ss_pred CCEEEEecccccc--cccCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHHh----CCCEEEEECCHHHH
Confidence 8889999877632 1233 7899999999999865432222 244455555554422 35799999999999
Q ss_pred HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHh--cCceeEE------ee--cCCC---CCCCCCHHHHHhhhcCCceEE
Q 019298 113 IDVAMALLSR--PGANILLPRPGFPIYELSAAF--RHIEVRH------FD--LLPD---KGWEVDLDDIESLADQNTVAL 177 (343)
Q Consensus 113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~--~g~~~~~------~~--~~~~---~~~~~d~~~l~~~~~~~~~~i 177 (343)
...+++.... ..++|+..+-+|+++...... .+..... ++ .... -.| -|++.+++.+..+..+.
T Consensus 143 ~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~vAa 221 (453)
T PRK07046 143 NRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADGDVAA 221 (453)
T ss_pred HHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCCCeEE
Confidence 9999887531 236888888888886432211 1100000 00 0000 001 17889998885444455
Q ss_pred EEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298 178 VIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255 (343)
Q Consensus 178 ~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 255 (343)
++..| ....|.+ .+.+.++++.++|++||+++|.||+.. |..+-.... ..++-.+. ++ +++|.++ .|+.+|
T Consensus 222 vi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~--~~~gv~PD-i~--t~gK~lg-gG~Pi~ 294 (453)
T PRK07046 222 VLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYT--RAHGLEPD-FL--VVGKPIA-GGVPCA 294 (453)
T ss_pred EEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchh--HHhCCCcc-ce--eehhhhc-CCCcce
Confidence 66667 4444544 566899999999999999999999986 322111111 11222222 33 4799965 579999
Q ss_pred EEEEeCCCCCCCchHHHHHHhhh----------hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhc
Q 019298 256 WFVTTDPCGMFRKPKVVERMKKY----------FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYK 323 (343)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~ 323 (343)
.++++ +++.+.+... ...+++.++++.+++ .+.|+. +.+ ..++++++-+.+.+.|+
T Consensus 295 av~g~--------~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~-~a~L~~---l~~~~~~~~~~~~g~~l~~~L~ 362 (453)
T PRK07046 295 VYGFS--------AELAERAQAAKASAPPGHSGIGTTLSANALAMAAM-RATLAE---VMTEAAYAHMLALAARLAAGLR 362 (453)
T ss_pred eeeeh--------HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHH-HHHHHH---HhcccHHHHHHHHHHHHHHHHH
Confidence 98885 3666666421 122456677776666 444331 111 44455555555555444
No 317
>PRK05965 hypothetical protein; Provisional
Probab=99.44 E-value=3.5e-11 Score=113.23 Aligned_cols=269 Identities=15% Similarity=0.105 Sum_probs=157.7
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+++.++|+..|.-.. +++ .+|++.+++++++..... ..+. ....+.+..+++.+.... +-+.+.++++++++
T Consensus 44 dG~~ylD~~~g~~~~--~lGh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGS 117 (459)
T PRK05965 44 SGHQLLDAFAGLWCV--NVGYGQESIVEAAAEQMRELPYATGYF--HFGSEPAIRLAAKLAERA--PGSLNHVYFTLGGS 117 (459)
T ss_pred CCCEEEECcccHHhc--cCCCCCHHHHHHHHHHHHhcCCccccc--ccCCHHHHHHHHHHHhhC--CCCcCEEEEeCChh
Confidence 488999998775331 233 689999999999875321 1110 011233344455443322 22346899999999
Q ss_pred HHHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhc-Cce------------eEEeecCCC--CCCCCC-----
Q 019298 111 QAIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFR-HIE------------VRHFDLLPD--KGWEVD----- 162 (343)
Q Consensus 111 ~al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~~--~~~~~d----- 162 (343)
+|++.+++.... + ..+|+...-+|++....+... +.. +..++.... ..+.-|
T Consensus 118 EAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (459)
T PRK05965 118 DAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAII 197 (459)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHH
Confidence 999999987531 2 257888888887764332221 110 111211100 001112
Q ss_pred ---HHHHHhhhcC---CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 163 ---LDDIESLADQ---NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 163 ---~~~l~~~~~~---~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
++.+++.+.. +..+.++..| +...|.. .+.+.++++.++|++||+++|.||++.+|...+.- .....++-.
T Consensus 198 ~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~-~a~~~~gv~ 276 (459)
T PRK05965 198 AASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPL-FACEAEGVV 276 (459)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchh-hhHhhcCCC
Confidence 2566666642 2334455555 5566765 67789999999999999999999999998655432 122222222
Q ss_pred CCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh--------hhccccCcchHHHHHHHhccchhhHHHH
Q 019298 235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK--------YFDILGDPATFIQVCIMYGCLSTIMQIM 305 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~~~l~~~~~~l 305 (343)
++++ +++|.++ .| +.+|.+++++ ++.+.+.. ....+++.++++.+++ .+.|+ .+.
T Consensus 277 PDiv---~~gKgl~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa-~a~L~---~l~ 340 (459)
T PRK05965 277 PDLM---TVAKGLT-SGYVPMGAVLMSD--------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVG-LEVLR---LYH 340 (459)
T ss_pred CCeE---Eechhhc-cCCcceeEEEEcH--------HHHHHHhccccccccccccCCCCCCHHHHHHH-HHHHH---HHH
Confidence 2333 3599964 57 5999999853 56665542 1223556778777766 33332 111
Q ss_pred H--HHHHHHHHHHHHHHhhcC
Q 019298 306 I--HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 306 ~--~~~~~~~~~~~~~~~L~~ 324 (343)
+ ..++.++.-+.+.+.|++
T Consensus 341 ~~~l~~~~~~~g~~l~~~l~~ 361 (459)
T PRK05965 341 EGGLLANGQKAGPRFAAGLDA 361 (459)
T ss_pred hccHHHHHHHHHHHHHHHHHh
Confidence 2 555666666666666654
No 318
>PRK07482 hypothetical protein; Provisional
Probab=99.44 E-value=4.3e-11 Score=112.70 Aligned_cols=268 Identities=15% Similarity=0.077 Sum_probs=158.9
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+++.++|+..|.-.. .++ .+|++.++++++++... .+.+. ....+.+..+|+.+.+.. +-+.+.++++++++
T Consensus 48 dG~~ylD~~sg~~~~--~lGh~~p~v~~Av~~q~~~~~~~~~~~--~~~~~~~~~lAe~L~~~~--p~~~~~v~f~~sGS 121 (461)
T PRK07482 48 QGRRYIDAFAGLYCV--NVGYGRTEVAEAIAEQAKELAYYHTYV--GHGTEASITLSKRIIDRA--PAGMSKVYYGLSGS 121 (461)
T ss_pred CCCEEEEcccchhhh--cCCCCCHHHHHHHHHHHHhcCcccccc--ccCCHHHHHHHHHHHHhC--CCCcCEEEEeCchH
Confidence 388999999886442 233 68999999999987642 11110 112344555555554322 22346899999999
Q ss_pred HHHHHHHHHhc------C-C-CCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCC---CC------
Q 019298 111 QAIDVAMALLS------R-P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKG---WE------ 160 (343)
Q Consensus 111 ~al~~~~~~l~------~-~-gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~---~~------ 160 (343)
+|++.+++... . + ..+|+...-+|++....+..... .+..++...... ..
T Consensus 122 EAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 201 (461)
T PRK07482 122 DANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQF 201 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHH
Confidence 99999998763 1 1 25788888888775433222111 111111110000 00
Q ss_pred --CCHHHHHhhhc-C--CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 161 --VDLDDIESLAD-Q--NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 161 --~d~~~l~~~~~-~--~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
-+++.+++.+. . +..+.++.-| ....|.. .+.+.+++|.++|++||+++|.||++.+|...+... ....++-
T Consensus 202 ~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~~~~gv 280 (461)
T PRK07482 202 SAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMF-GSDHYGI 280 (461)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchh-hHHhcCC
Confidence 03567777663 1 3345555666 5555766 577899999999999999999999999986554321 1222222
Q ss_pred CCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHH
Q 019298 234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQI 304 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~ 304 (343)
.++++ + ++|.++ .| ..+|.+++++ ++.+.+... ...++..++++.+++ .+.|+ .+
T Consensus 281 ~PDiv-~--~gKgl~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa-~a~L~---~~ 344 (461)
T PRK07482 281 EPDLI-T--VAKGLT-SAYAPLSGSIVGE--------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAA-LANLD---IL 344 (461)
T ss_pred CCCEE-E--Eccccc-cCccccceeeecH--------HHHHHHhcccccCCccccCCCCCcCHHHHHHH-HHHHH---HH
Confidence 23333 3 699964 46 4888888753 565655421 223556778877776 44432 22
Q ss_pred HH--HHHHHHHHHHHHHHhhc
Q 019298 305 MI--HGNFLENFAGSCVPSYK 323 (343)
Q Consensus 305 l~--~~~~~~~~~~~~~~~L~ 323 (343)
.+ ..++.++.-+.+.+.|+
T Consensus 345 ~~~~l~~~~~~~g~~l~~~L~ 365 (461)
T PRK07482 345 ERENLVGNAAEVGAYFRARLR 365 (461)
T ss_pred HhCCHHHHHHHHHHHHHHHHH
Confidence 22 45555566666655554
No 319
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.44 E-value=7.6e-12 Score=115.27 Aligned_cols=248 Identities=17% Similarity=0.061 Sum_probs=150.0
Q ss_pred ceeEeccCCCCCCCCCCCcHH-HHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCC-CCCcEEEec-ChH
Q 019298 36 KVISLAMGDPTVHSCFHTTHV-ATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTS-GCT 110 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~-g~~ 110 (343)
..++|+.|- ..+++. +++++....... +...+ ..-..+.|+.+++++ +. ++++|++++ |++
T Consensus 12 ~~~~f~~Gp------~~~~~~~v~~a~~~~~~~~--~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~~~~gs~T 77 (378)
T PRK03080 12 ADPRFSSGP------CKKRPGWQLEALADALLGR--SHRQKPVKALLKRVIEGTRELL------SLPEGYEVGIVPGSDT 77 (378)
T ss_pred CCCCcCCCC------cCCChHHHHHHHHhhhccc--CcCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchH
Confidence 345565553 345666 888887654321 11111 123356777777777 33 345788875 899
Q ss_pred HHHHHHHHHhcCC-CCeEEEeCCCCcchHH--HHHhcCc-eeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc
Q 019298 111 QAIDVAMALLSRP-GANILLPRPGFPIYEL--SAAFRHI-EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (343)
Q Consensus 111 ~al~~~~~~l~~~-gd~vl~~~p~~~~~~~--~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt 186 (343)
.+++.++.++.++ ++.|+. .-.|+.-.. .++..|. +++.++.+ .+..+|+++++. ++.|.+++..|.|
T Consensus 78 ~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~~-----~~~V~~~h~~t~t 149 (378)
T PRK03080 78 GAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVDF-----DRDVVFTWNGTTT 149 (378)
T ss_pred HHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcCC-----CCCEEEEecCCcc
Confidence 9999999999874 445544 334443222 2245688 87877654 344567776432 5668889999999
Q ss_pred ccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCC
Q 019298 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGM 265 (343)
Q Consensus 187 G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~ 265 (343)
|...+ +++|++ +++|+++++|.+++... .+..+..+ .+++.|..|.++. +| +|++.++.
T Consensus 150 G~~~p---i~~I~~--~~~g~~~vVDa~qs~G~----~pidv~~i-----D~~~~s~~K~l~~P~G--~g~l~v~~---- 209 (378)
T PRK03080 150 GVRVP---VARWIG--ADREGLTICDATSAAFA----LPLDWSKL-----DVYTFSWQKVLGGEGG--HGMAILSP---- 209 (378)
T ss_pred ceecc---chhhcc--ccCCCeEEEeccccccc----CCCCHHHC-----cEEEEehhhhCCCCCc--eEEEEECH----
Confidence 99976 555566 78899999999988732 22223222 3889999999765 66 78877753
Q ss_pred CCchHHHHHHhhh----------------------h-ccccCcchH-HHHHHHhccchhhHHH--HH-HHHHHHHHHHHH
Q 019298 266 FRKPKVVERMKKY----------------------F-DILGDPATF-IQVCIMYGCLSTIMQI--MI-HGNFLENFAGSC 318 (343)
Q Consensus 266 ~~~~~~~~~l~~~----------------------~-~~~~~~~~~-~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~ 318 (343)
+.++++... . ..+.+.++. ...++ .++|+...+. ++ .+++.+++.+.+
T Consensus 210 ----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l-~~al~~l~~~gG~e~i~~r~~~l~~~l 284 (378)
T PRK03080 210 ----RAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDY-LDQLDWANSIGGLDALIARTAANASVL 284 (378)
T ss_pred ----HHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 344433311 0 001122222 22222 3333322221 22 677888888899
Q ss_pred HHhhcCCCCcee
Q 019298 319 VPSYKLIPELIN 330 (343)
Q Consensus 319 ~~~L~~~~g~~~ 330 (343)
.+.|++++++.+
T Consensus 285 ~~~l~~~~~~~~ 296 (378)
T PRK03080 285 YDWAEKTPWATP 296 (378)
T ss_pred HHHHHhCCCccc
Confidence 999988866654
No 320
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=6e-11 Score=111.43 Aligned_cols=267 Identities=16% Similarity=0.103 Sum_probs=150.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++.++|+..|.-.. +.--.+|.+.+++++++++... ..|.. .+....+++.+.... +...+.+++++++++
T Consensus 52 G~~ylD~~~g~~~~-~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~--p~~~~~v~f~~SGsE 124 (457)
T PRK05639 52 GNVFIDFLAGAAAA-STGYSHPKLVKAVQEQVALIQHSMIGYTH----SERAIRVAEKLAEIS--PIENPKVLFGLSGSD 124 (457)
T ss_pred CCEEEECCcCHHhh-ccCCCCHHHHHHHHHHHHhccccccCccC----CHHHHHHHHHHHhhC--CCCcCEEEEeCchHH
Confidence 78889998875331 1123789999999999875321 12222 123333444443321 222368999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCCC--CC----CCH------
Q 019298 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKG--WE----VDL------ 163 (343)
Q Consensus 112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~----~d~------ 163 (343)
|++.+++... ....+|+....+|++....+... +. ++..++...... +. -+.
T Consensus 125 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 204 (457)
T PRK05639 125 AVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINR 204 (457)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHH
Confidence 9999998763 23357888888887755433322 11 122222211000 00 022
Q ss_pred --HHHHhhh-----cCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 164 --DDIESLA-----DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 164 --~~l~~~~-----~~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
+.+++.+ ..+..+.++.-| ....|.. .+.+.++++.++|++||+++|+||++.++...+... ....++-.
T Consensus 205 ~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~ 283 (457)
T PRK05639 205 FLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWF-ASEWFEVK 283 (457)
T ss_pred HHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHH-HHHhcCCC
Confidence 2344433 123344555566 5556775 568899999999999999999999999865444321 11112222
Q ss_pred CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH--HHHHHH
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLE 312 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~ 312 (343)
++ |++ ++|.++ .|..+|.+++++ ++.+........+...++.+.+++ .+.|+ .+.+ ..++.+
T Consensus 284 PD-iv~--~gK~l~-gG~pi~av~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa-~a~l~---~l~~~~l~~~~~ 347 (457)
T PRK05639 284 PD-LII--FGKGVA-SGMGLSGVIGRK--------ELMDLTSGSALLTPAANPVISAAA-EATLE---IIEEENLLKNAL 347 (457)
T ss_pred CC-EEE--echhhc-CCCcceeEEehH--------HHHhhcCCCcccCCCcCHHHHHHH-HHHHH---HHHHccHHHHHH
Confidence 23 444 799965 478899999853 455521111122445667666555 33332 2222 445555
Q ss_pred HHHHHHHHhhcC
Q 019298 313 NFAGSCVPSYKL 324 (343)
Q Consensus 313 ~~~~~~~~~L~~ 324 (343)
++-+++.+.|++
T Consensus 348 ~~g~~l~~~L~~ 359 (457)
T PRK05639 348 KVGEFIKKRLLE 359 (457)
T ss_pred HHHHHHHHHHHH
Confidence 555555555544
No 321
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.42 E-value=4.2e-11 Score=111.51 Aligned_cols=269 Identities=16% Similarity=0.123 Sum_probs=156.7
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++++++|+..|.-.. .++ .+|.+.+++++++......... ....+.+..+++.+.+.. +...+.+++++++++
T Consensus 41 dG~~ylD~~~g~~~~--~lGh~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~--p~~~~~v~f~~SGsE 114 (428)
T PRK07986 41 DGRRLVDGMSSWWAA--IHGYNHPQLNAAMKSQIDAMSHVMFG--GITHPPAIELCRKLVAMT--PQPLECVFLADSGSV 114 (428)
T ss_pred CCCEEEEcchhHHhh--cCCCCCHHHHHHHHHHHhhcCCcccc--ccCCHHHHHHHHHHHhhC--CCCcCEEEEeCCcHH
Confidence 388899998875331 233 6799999999998753211110 011234455555554322 223469999999999
Q ss_pred HHHHHHHHhcC-------CCCeEEEeCCCCcchHHHHHhc-Cce-------------eEEeecCCCC---CC-CCCHHHH
Q 019298 112 AIDVAMALLSR-------PGANILLPRPGFPIYELSAAFR-HIE-------------VRHFDLLPDK---GW-EVDLDDI 166 (343)
Q Consensus 112 al~~~~~~l~~-------~gd~vl~~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~---~~-~~d~~~l 166 (343)
|++.+++.... ...+|+...-+|++....+... +.. +..++..... .+ .-|++++
T Consensus 115 Ave~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l 194 (428)
T PRK07986 115 AVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPF 194 (428)
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHH
Confidence 99999887532 2367888898887754333222 211 1111111000 00 1145677
Q ss_pred HhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEc
Q 019298 167 ESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG 241 (343)
Q Consensus 167 ~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~ 241 (343)
++.++. +..+.++..| +.-.|.. .+.+.+++|.++|++||+++|+||++.++...+... ....++-.+. |+
T Consensus 195 ~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~f-a~~~~gv~PD-i~-- 270 (428)
T PRK07986 195 ARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLF-ACEHAGIAPD-IL-- 270 (428)
T ss_pred HHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCee-eecccCCCCC-EE--
Confidence 777742 2334444545 4455654 567899999999999999999999998764444321 1122222222 33
Q ss_pred cCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh------hccccCcchHHHHHHHhccchhhHHHHH--HHHHHH
Q 019298 242 SLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLE 312 (343)
Q Consensus 242 S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~ 312 (343)
+++|.++ .| +.+|.++++ +++.+.+... ...++..++++.+++ .+.|+. +.+ .+++++
T Consensus 271 t~gK~l~-gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa-~a~L~~---i~~~~~~~~~~ 337 (428)
T PRK07986 271 CLGKALT-GGTMTLSATLTT--------REVAETISNGEAGCFMHGPTFMGNPLACAVA-NASLSL---LESGDWQQQVA 337 (428)
T ss_pred Eechhhh-CCcccCcchhch--------HHHHHHhhcCCCCccccCCCCCcCHHHHHHH-HHHHHH---HHhCCHHHHHH
Confidence 4899975 56 578887774 3677776541 223445677776666 343321 111 566666
Q ss_pred HHHHHHHHhhcC
Q 019298 313 NFAGSCVPSYKL 324 (343)
Q Consensus 313 ~~~~~~~~~L~~ 324 (343)
++-+.+.+.|++
T Consensus 338 ~~g~~l~~~l~~ 349 (428)
T PRK07986 338 AIEAQLREELAP 349 (428)
T ss_pred HHHHHHHHHHHH
Confidence 666666666654
No 322
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.41 E-value=7.5e-11 Score=110.47 Aligned_cols=271 Identities=18% Similarity=0.135 Sum_probs=157.1
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||..|.-.. +.-..+|.+.+++++++++.. ...+ ....+.+..+++.+.+.. +-..+.+++++++++
T Consensus 44 dG~~ylD~~~g~~~~-~lGh~~p~v~~ai~~ql~~l~~~~~~---~~~~~~~~~la~~l~~~~--p~~~~~v~f~~sGse 117 (442)
T PRK13360 44 DGRRVLDGTAGLWCV-NAGHGRPEIVEAVRAQAGELDYAPAF---QMGHPKAFELANRIAEIA--PGGLNHVFFTNSGSE 117 (442)
T ss_pred CCCEEEECchhHHHh-ccCCCCHHHHHHHHHHHHhCCCcccC---CcCCHHHHHHHHHHHHhC--CCCCCEEEEeCCcHH
Confidence 388899998775321 112378999999999987521 1111 111233444555543322 112468999999999
Q ss_pred HHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecCCC---CCCCC------
Q 019298 112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPD---KGWEV------ 161 (343)
Q Consensus 112 al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~---~~~~~------ 161 (343)
|++.+++.... + ..+|+...-+|++....+... |. .+..++.... ..+..
T Consensus 118 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 197 (442)
T PRK13360 118 SVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHG 197 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHH
Confidence 99999886531 1 257998888888764332211 11 1122222110 00111
Q ss_pred --CHHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 162 --DLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 162 --d~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
..+.+++.+. .+..+.++..| ....|.. .+.+.+++|.++|++||+++|+||++.++...+... ....++-.
T Consensus 198 ~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~ 276 (442)
T PRK13360 198 AELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPF-AAQYFGVT 276 (442)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCC
Confidence 1456676664 13334455555 6667776 567899999999999999999999998764444321 11112211
Q ss_pred CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHHHH
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQIMI 306 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~l~ 306 (343)
+. | .+++|.++...+.+|.+++++ ++.+.+... ...++..++++.+++ .+.|+ .+.+
T Consensus 277 PD-i--vt~gK~l~gG~~P~gav~~~~--------~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa-~a~L~---~l~~ 341 (442)
T PRK13360 277 PD-L--LTCAKGLTNGAIPMGAVFVSS--------EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAA-LATLD---LYER 341 (442)
T ss_pred Cc-e--eeeeeccccCccceEEEEEcH--------HHHHHhhcCCccccccccCCCCCCCHHHHHHH-HHHHH---HHHh
Confidence 22 3 378999765337899988853 566655321 222445677766666 44432 1111
Q ss_pred --HHHHHHHHHHHHHHhhcCC
Q 019298 307 --HGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 307 --~~~~~~~~~~~~~~~L~~~ 325 (343)
..++.+++-+++.+.|+++
T Consensus 342 ~~l~~~~~~~g~~l~~~l~~l 362 (442)
T PRK13360 342 EGLLTRAARLAPYWEDALHSL 362 (442)
T ss_pred CCHHHHHHHHHHHHHHHHHHh
Confidence 5566666666666666543
No 323
>PRK07678 aminotransferase; Validated
Probab=99.41 E-value=1.6e-10 Score=108.63 Aligned_cols=265 Identities=15% Similarity=0.079 Sum_probs=153.8
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++++++|+..|.-.. +.-..+|++.+++++++....... .... .+....+++.+.+..+ ..+.+++++++++|
T Consensus 45 dG~~ylD~~~g~~~~-~lGh~~p~v~~ai~~q~~~~~~~~--~~~~-~~~~~~lae~l~~~~~---~~~~v~f~~sGseA 117 (451)
T PRK07678 45 QGNRYLDGMSGLWCV-NVGYGRKELAEAAYEQLKTLSYFP--LTQS-HEPAIKLAEKLNEWLG---GEYVIFFSNSGSEA 117 (451)
T ss_pred CCCEEEEccccHHhh-cCCCCCHHHHHHHHHHHHhcCccc--cccC-CHHHHHHHHHHHHhCC---CCCEEEEeCCcHHH
Confidence 388999998775331 112368999999999987542111 1111 2233444444443221 13589999999999
Q ss_pred HHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecCCCCCCCC---------C
Q 019298 113 IDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKGWEV---------D 162 (343)
Q Consensus 113 l~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~~~---------d 162 (343)
++.+++.... +| .+|+...-+|++....+... +. .+..++.. +.+.. +
T Consensus 118 ~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 195 (451)
T PRK07678 118 NETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPP--DCYRMPGIESEDIYD 195 (451)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCC--ccccccccCChHHHH
Confidence 9999887531 22 57888888887765444332 11 11112111 11111 1
Q ss_pred ---HHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 163 ---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 163 ---~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
++.+++.+. .+..+.++..| ..-.|.. .+.+.++++.++|++||+++|.||++.+|...+.. .....++-.
T Consensus 196 ~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~-~~~~~~gv~ 274 (451)
T PRK07678 196 LECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKA-FGFMNYGVK 274 (451)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchh-HHHHhcCCC
Confidence 223455553 23344555566 4445666 57789999999999999999999999887554431 112222222
Q ss_pred CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-------hccccCcchHHHHHHHhccchhhHHHHH-
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQVCIMYGCLSTIMQIMI- 306 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~~l~~~~~~l~- 306 (343)
+. |+ +++|.++...+.+|.+++++ ++.+.+... ...+++.++++.+++ .+.|+. +.+
T Consensus 275 PD-iv--t~gK~lggG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa-~a~l~~---l~~~ 339 (451)
T PRK07678 275 PD-II--TMAKGITSAYLPLSATAVKK--------EIYEAFKGKGEYEHFRHVNTFGGNPAACALA-LKNLEI---MENE 339 (451)
T ss_pred CC-EE--EeecccccCCcceeEEEEcH--------HHHHHHhccCcccccccCCCCCcCHHHHHHH-HHHHHH---HHhC
Confidence 22 33 56999765447999999853 666666431 223556777777776 444331 111
Q ss_pred -HHHHHHHHHHHHHHhh
Q 019298 307 -HGNFLENFAGSCVPSY 322 (343)
Q Consensus 307 -~~~~~~~~~~~~~~~L 322 (343)
..+++++.-+.+.+.|
T Consensus 340 ~~~~~~~~~g~~l~~~l 356 (451)
T PRK07678 340 NLIERSAQLGELLLEQL 356 (451)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 4445555555555544
No 324
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.41 E-value=5.9e-11 Score=110.54 Aligned_cols=270 Identities=15% Similarity=0.103 Sum_probs=153.1
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|.-. ..++ .+|++.+++++++++.....+.. -..+....+++.+.... +-..+.+++++++++
T Consensus 38 dG~~ylD~~~g~~~--~~lGh~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGse 111 (422)
T PRK05630 38 DGSTVIDAMSSWWS--AAHGHGHPRLKAAAHKQIDTMSHVMFGG--LTHEPAIKLTRKLLNLT--DNGLDHVFYSDSGSV 111 (422)
T ss_pred CCCEEEEcchhHHH--hcCCCCCHHHHHHHHHHHHhCCCcccCC--cCCHHHHHHHHHHHhhC--CCCcCEEEEeCCcHH
Confidence 38899999887633 1233 78999999999987532111110 01223344444443321 122469999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCCCCCC-C----HH
Q 019298 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGWEV-D----LD 164 (343)
Q Consensus 112 al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~-d----~~ 164 (343)
|++.+++.... ++ .+|+...-+|++....+... +. ....++......... + .+
T Consensus 112 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 191 (422)
T PRK05630 112 SVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLR 191 (422)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHH
Confidence 99999887531 22 57888888887754433322 11 111222111000000 1 23
Q ss_pred HHHhhhcCCceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEc
Q 019298 165 DIESLADQNTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG 241 (343)
Q Consensus 165 ~l~~~~~~~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~ 241 (343)
.+++.+.++..+++ ..| ....|.. .+.+.++++.++|++||+++|+||++.++...+.. .....++-.++ |+
T Consensus 192 ~~~~~~~~~iAAvi-~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~-~a~~~~gv~PD-i~-- 266 (422)
T PRK05630 192 SLELLIDETVAAII-IEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGEL-FATLAAGVTPD-IM-- 266 (422)
T ss_pred HHHHHHhhceEEEE-EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchh-hHHHhcCCCCC-ee--
Confidence 44554544444444 445 5667775 56789999999999999999999999887544432 11111222222 33
Q ss_pred cCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh-------hccccCcchHHHHHHHhccchhhHHHHHHHHHHHH
Q 019298 242 SLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLEN 313 (343)
Q Consensus 242 S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~ 313 (343)
+++|.++ .| ..+|.+++++ ++.+.+... ...++..++.+.+++ .+.|+...+- +.++++++
T Consensus 267 t~gK~l~-gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa-~aaL~~l~~~-~~~~~~~~ 335 (422)
T PRK05630 267 CVGKALT-GGFMSFAATLCTD--------KVAQLISTPNGGGALMHGPTFMANPLACAVA-HASLEIIETG-MWRKQVKR 335 (422)
T ss_pred eeechhh-cCccccceeeccH--------HHHHHHhccCCCCccccCCCCcCCHHHHHHH-HHHHHHHHhC-cHHHHHHH
Confidence 6799953 46 5789988853 566665421 123456677766666 3443321110 14455556
Q ss_pred HHHHHHHhhcC
Q 019298 314 FAGSCVPSYKL 324 (343)
Q Consensus 314 ~~~~~~~~L~~ 324 (343)
+-+.+.+.|+.
T Consensus 336 ~g~~l~~~L~~ 346 (422)
T PRK05630 336 IEAELIAGLSP 346 (422)
T ss_pred HHHHHHHHHHH
Confidence 55555555543
No 325
>PRK12403 putative aminotransferase; Provisional
Probab=99.41 E-value=1.1e-10 Score=109.81 Aligned_cols=247 Identities=17% Similarity=0.148 Sum_probs=139.3
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||..|.-....++ .+|.+.+++++++++... +.+ ..+..+....+++.+.... +-..+.+++++++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~~~~~--~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGse 126 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPYYNMF--FHTTHPAVIELSELLFSLL--PGHYSHAIYTNSGSE 126 (460)
T ss_pred CCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCCeecc--cccCCHHHHHHHHHHHHhC--CCCcCEEEEeCCcHH
Confidence 3788999987753211222 779999999999876321 111 0122233334444443221 212368999999999
Q ss_pred HHHHHHHHhc-------CCCC-eEEEeCCCCcchHHHH-HhcCce-----------eEEeecCC--CCCCCC--------
Q 019298 112 AIDVAMALLS-------RPGA-NILLPRPGFPIYELSA-AFRHIE-----------VRHFDLLP--DKGWEV-------- 161 (343)
Q Consensus 112 al~~~~~~l~-------~~gd-~vl~~~p~~~~~~~~~-~~~g~~-----------~~~~~~~~--~~~~~~-------- 161 (343)
|+..+++... ++++ .|+...-+|++..... ...+.. +..++... ...+..
T Consensus 127 A~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 206 (460)
T PRK12403 127 ANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRR 206 (460)
T ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHH
Confidence 9999998874 2333 4555566776543322 222211 11111100 000011
Q ss_pred CHHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC
Q 019298 162 DLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236 (343)
Q Consensus 162 d~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~ 236 (343)
+.+.+++.+. .+..+.++.-| ....|.. .+.+.+++|.++|++||+++|+||++.++...+... ....++-.++
T Consensus 207 ~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~e~~gv~PD 285 (460)
T PRK12403 207 AALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWF-AHEHFGFEPD 285 (460)
T ss_pred HHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-hhhhcCCCCC
Confidence 1244555442 12334455555 5666765 567899999999999999999999998875544321 1111222222
Q ss_pred EEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccc
Q 019298 237 ILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCL 298 (343)
Q Consensus 237 ~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l 298 (343)
|+ +++|.++ .| ..+|.++++ +++.+.+... ...+++.++++.+++ .+.|
T Consensus 286 -iv--~~gK~lg-gG~~Piga~v~~--------~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaa-la~L 340 (460)
T PRK12403 286 -TL--SIAKGLT-SGYVPMGGLVLS--------KRIAEALVEQGGVFAHGLTYSGHPVAAAVA-IANL 340 (460)
T ss_pred -eE--EEccccc-ccccceEEEEEC--------HHHHHHHhcCCCccccCCCCCCCHHHHHHH-HHHH
Confidence 44 3899965 46 489988875 2566666421 122445677777666 4443
No 326
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=1.2e-10 Score=109.59 Aligned_cols=267 Identities=16% Similarity=0.063 Sum_probs=152.5
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
+++++||..+.. .+++ .+|.+.++++++++.... .......+....+++.+....+ -..+.++++++++++
T Consensus 71 G~~ylD~~g~~~---~~lGh~~p~v~~Ai~~ql~~~~~---~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseA 142 (459)
T PRK06082 71 GKKYMDFHGNNV---HQLGYGHPHVIEKVKEQMAKLPF---SPRRFTNETAIECAEKLTEIAG--GELNRVLFAPGGTSA 142 (459)
T ss_pred CCEEEEcccHhh---cccCCCCHHHHHHHHHHHHhCCC---ccCccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHHH
Confidence 778899873322 2244 789999999999875321 1111122444455555543221 123689999999999
Q ss_pred HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHh-cCce------------eEEeecCCCCC--CC-CC------HHHHHh
Q 019298 113 IDVAMALLSR--PGANILLPRPGFPIYELSAAF-RHIE------------VRHFDLLPDKG--WE-VD------LDDIES 168 (343)
Q Consensus 113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~~~--~~-~d------~~~l~~ 168 (343)
+..+++.... ...+|+...-+|++....+.. .|.. +..++...... +. .| ++.+++
T Consensus 143 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (459)
T PRK06082 143 IGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEY 222 (459)
T ss_pred HHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHH
Confidence 9999887531 236788888888765433322 2211 11121100000 00 01 245666
Q ss_pred hhcC-CceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc
Q 019298 169 LADQ-NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR 246 (343)
Q Consensus 169 ~~~~-~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 246 (343)
.+.. +..+.++.-| .+..+...+.+.++++.++|++||+++|.||++.++...+... ....++-.++ |++ ++|.
T Consensus 223 ~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~f-a~e~~gv~PD-iv~--~gKg 298 (459)
T PRK06082 223 VIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWF-THQAYGIEPD-ILC--IGKG 298 (459)
T ss_pred HHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HhHhhCCCCC-EEE--eccc
Confidence 6642 2334555556 5554556788999999999999999999999999875444321 1122222223 433 8999
Q ss_pred cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhc
Q 019298 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYK 323 (343)
Q Consensus 247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~ 323 (343)
++...+.+|.+++++ ++....... ...+++.++++.+++ .+.|+. +.+ ..++++++-+.+.+.|+
T Consensus 299 l~gG~~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa-~a~L~~---l~~~~l~~~~~~~g~~l~~~L~ 366 (459)
T PRK06082 299 LGGGLVPIAAMITKD--------KYNTAAQISLGHYTHEKSPLGCAAA-LATIEV---IEQEGLLEKVKADSQFMRERLL 366 (459)
T ss_pred ccCCCCcceEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHH-HHHHHH---HHhcCHHHHHHHHHHHHHHHHH
Confidence 775336899998853 333222111 113556677776666 444331 111 55666666666666665
Q ss_pred C
Q 019298 324 L 324 (343)
Q Consensus 324 ~ 324 (343)
+
T Consensus 367 ~ 367 (459)
T PRK06082 367 E 367 (459)
T ss_pred H
Confidence 4
No 327
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.40 E-value=1.2e-10 Score=109.22 Aligned_cols=273 Identities=17% Similarity=0.117 Sum_probs=156.3
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++++++|+..|.-.. +++ .+|.+.++++++++.... +.......+....+++.+.... +...+.+++++++++
T Consensus 47 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~--p~~~~~v~f~~sGse 120 (445)
T PRK09221 47 DGRKILDGTAGLWCC--NAGHGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELA--PGGLDHVFFTNSGSE 120 (445)
T ss_pred CCCEEEEccccHhhc--cCCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCcHH
Confidence 388999998885332 233 789999999999875211 1110111233334555554322 122468999999999
Q ss_pred HHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCC---CCCCCC------
Q 019298 112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP---DKGWEV------ 161 (343)
Q Consensus 112 al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~------ 161 (343)
+++.+++.... + ..+|+...-+|++....+...+. .+..++... ...+..
T Consensus 121 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (445)
T PRK09221 121 SVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHG 200 (445)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHH
Confidence 99999887531 1 25788888888776433322211 111222110 000000
Q ss_pred --CHHHHHhhhcC---CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 162 --DLDDIESLADQ---NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 162 --d~~~l~~~~~~---~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
..+.+++.+.. +..+.++..| ....|.. .+.+.++++.++|++||+++|+||++.++...+... ....++-.
T Consensus 201 ~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-~~~~~gv~ 279 (445)
T PRK09221 201 AELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAF-AAERFGVT 279 (445)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhh-HHHhcCCC
Confidence 13466666542 2334444555 6677876 467889999999999999999999998765444321 11112211
Q ss_pred CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHHHH
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQIMI 306 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~l~ 306 (343)
+. +.+++|.++...+.+|.+++++ ++.+.+... ...++..++++.+++ .+.|+...+ .+
T Consensus 280 PD---i~~~gK~l~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa-~a~L~~i~~-~~ 346 (445)
T PRK09221 280 PD---IITFAKGLTNGAIPMGAVIASD--------EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAG-LATLDIYRE-ED 346 (445)
T ss_pred CC---EEEeccccccCcccceeeEEcH--------HHHHhhccCcccccccccccCCCcCHHHHHHH-HHHHHHHHh-cc
Confidence 22 2367999755447789988853 566655421 222445677766666 344332110 01
Q ss_pred HHHHHHHHHHHHHHhhcCC
Q 019298 307 HGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 307 ~~~~~~~~~~~~~~~L~~~ 325 (343)
..++++++.+.+.+.|+++
T Consensus 347 l~~~~~~~g~~l~~~l~~l 365 (445)
T PRK09221 347 LFERAAELAPYFEDAVHSL 365 (445)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 5666777777777766554
No 328
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.39 E-value=1.2e-10 Score=105.78 Aligned_cols=278 Identities=15% Similarity=0.092 Sum_probs=168.2
Q ss_pred ccceeEeccCCCCCCCCC-CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCF-HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
..-.|||-... .. .++++++++|.. .+ ..|..++....|++.+++++ ..+.++.|..++.+
T Consensus 40 ~dV~IDLrSDT-----gT~apS~~m~aAM~~--GD---D~Y~gdpSv~~Lee~vael~--------G~E~alpthqGRga 101 (467)
T TIGR02617 40 EDVFIDLLTDS-----GTGAVTQSMQAAMMR--GD---EAYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGA 101 (467)
T ss_pred CCeEEECccCC-----CCCCCCHHHHHHHHc--CC---cccccCchHHHHHHHHHHHh--------CCceEEECCCCchH
Confidence 45567776654 23 367888888776 11 25877778899999999999 45678889888999
Q ss_pred HHHHHHHhcC-CCCeEEEeCC-------C-CcchHHHHHhcCceeEEeecC--------CCCCCCCCHHHHHhhhcC---
Q 019298 113 IDVAMALLSR-PGANILLPRP-------G-FPIYELSAAFRHIEVRHFDLL--------PDKGWEVDLDDIESLADQ--- 172 (343)
Q Consensus 113 l~~~~~~l~~-~gd~vl~~~p-------~-~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~~~~--- 172 (343)
-..+++.+++ +|+.+++..+ . |......+...|.....+... ......+|++++++++++
T Consensus 102 E~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~ 181 (467)
T TIGR02617 102 EQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP 181 (467)
T ss_pred HHHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC
Confidence 9999999988 6777765443 2 222344567778777665321 222357899999999974
Q ss_pred -CceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcc----------ccCCCCCCccc-ccCCCCCEEE
Q 019298 173 -NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL----------VFGDKPFVPMG-VFGSTVPILT 239 (343)
Q Consensus 173 -~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~----------~~~~~~~~~~~-~~~~~~~~i~ 239 (343)
+...+...-. |.-.|+++|.+.++++.++|++||+.++.|.+-..- .+.+.+...+. .+-.. -..+
T Consensus 182 ~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~-aDsv 260 (467)
T TIGR02617 182 NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKY-ADML 260 (467)
T ss_pred CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhcc-CCEE
Confidence 1222222111 334789999999999999999999999999754321 12222211110 00011 1267
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh------ccccCcchHHHHHHHhccchh--hHHHHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF------DILGDPATFIQVCIMYGCLST--IMQIMIHGNFL 311 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~ 311 (343)
..|+||.++.+ +|.+++.+++.+ .++.++++... ..+++.+.--..+++.+ |.+ ...+++ .-
T Consensus 261 t~slsKglgAp---vGg~Lag~d~~~---~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~G-l~e~~~~~yl~---~r 330 (467)
T TIGR02617 261 AMSAKKDAMVP---MGGLLCFKDDSF---FDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVG-LYDGMNLDWLA---YR 330 (467)
T ss_pred EEEcCCCCCCc---ccceEEecchhH---HHHHHHHHhhcccccCCcCcCchhHHHHHHHHhh-hhhcccHHHHH---HH
Confidence 77999997766 455444432200 04555555542 11334444444444122 322 122332 22
Q ss_pred HHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 312 ENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 312 ~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
-+..+++.+.|.+. |+++.. .||.-+|+|
T Consensus 331 i~qv~yl~~~L~~~-Gvpi~~-~Gghav~iD 359 (467)
T TIGR02617 331 INQVQYLVNGLEEI-GVVCQQ-AGGHAAFVD 359 (467)
T ss_pred HHHHHHHHHHHHhC-CCcEEe-cCccEEEEe
Confidence 22344555666665 898877 899888876
No 329
>PRK06149 hypothetical protein; Provisional
Probab=99.39 E-value=1.8e-10 Score=117.65 Aligned_cols=263 Identities=14% Similarity=0.086 Sum_probs=150.6
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++++|+..|. ..++ .+|++.+++++++.....+ .|.. ....+|.+.+++++ +-..+.+++++++++
T Consensus 584 G~~ylD~~~~~----~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~-~~~~elae~L~~~~------p~~~~~v~f~~SGsE 652 (972)
T PRK06149 584 GRSYLDMVNNV----TVLGHGHPRLAAAAARQWSLLNTNSRFHY-AAVAEFSERLAALA------PDGLDTVFLVNSGSE 652 (972)
T ss_pred CCEEEECCCCc----cccCCCCHHHHHHHHHHHHhccccccccC-HHHHHHHHHHHHhC------CCCcCEEEEeCCchH
Confidence 78889998775 2355 7899999999998754222 1211 12234444444444 223468999999999
Q ss_pred HHHHHHHHh---cCCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCC--CCCC-CC-----HHHH
Q 019298 112 AIDVAMALL---SRPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPD--KGWE-VD-----LDDI 166 (343)
Q Consensus 112 al~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~--~~~~-~d-----~~~l 166 (343)
|...+++.. .++ .+|+..+-+|++....+... +. .+..++.... ..+. .+ .+.+
T Consensus 653 A~e~AlklAr~~tgr-~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~ 731 (972)
T PRK06149 653 ANDLAIRLAWAASGR-RDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDV 731 (972)
T ss_pred HHHHHHHHHHHhcCC-CeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHH
Confidence 999999853 333 56777777777544322111 10 0111211100 0011 11 2333
Q ss_pred Hhhhc-----CCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298 167 ESLAD-----QNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (343)
Q Consensus 167 ~~~~~-----~~~~~i~~~~p-~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 239 (343)
++.++ .+..+.++.-| ....| ...+++.++++.++|++||+++|+||++.+|...|.....+..++-.+. |+
T Consensus 732 ~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PD-iv 810 (972)
T PRK06149 732 VAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPD-II 810 (972)
T ss_pred HHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCC-EE
Confidence 33221 13344555566 44445 4577889999999999999999999999877554432222222222223 33
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh--hhccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--YFDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFA 315 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~ 315 (343)
+++|.+| .|..+|.+++++ ++.+.+.. ....+.+.++++.+++ .+.|+ .+.+ ..++.++.-
T Consensus 811 --t~gK~lg-~G~Pl~av~~~~--------~i~~~~~~~~~~~sT~~gnP~~~aaa-la~L~---~i~~e~l~~~~~~~G 875 (972)
T PRK06149 811 --TMAKGMG-NGHPLGAVITRR--------EIAEALEAEGYFFSSTGGSPVSCRIG-MAVLD---VLREEKLQENARRVG 875 (972)
T ss_pred --Eeccccc-CCeeeEEEEEcH--------HHHhhhccCCcccCCCCCCHHHHHHH-HHHHH---HHHhcCHHHHHHHHH
Confidence 6799975 679999999853 56666653 1112345677777666 33332 1111 455555555
Q ss_pred HHHHHhhcC
Q 019298 316 GSCVPSYKL 324 (343)
Q Consensus 316 ~~~~~~L~~ 324 (343)
+++.+.|++
T Consensus 876 ~~l~~~L~~ 884 (972)
T PRK06149 876 DHLKARLEA 884 (972)
T ss_pred HHHHHHHHH
Confidence 555555543
No 330
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.39 E-value=1.5e-10 Score=107.90 Aligned_cols=268 Identities=14% Similarity=0.103 Sum_probs=154.0
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|.-. ..++ .+|++.+++++++.+..... ...-..+.+..+++.+.... +...+.+++++++++
T Consensus 42 dG~~ylD~~~g~~~--~~lGh~~p~v~~ai~~q~~~~~~~~--~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGse 115 (429)
T PRK06173 42 DGRRLIDGMSSWWA--ALHGYNHPRLNAAATNQLAKMSHIM--FGGFTHEPAVELAQKLLEIL--PPSLNKIFFADSGSV 115 (429)
T ss_pred CCCEEEEccchHHh--ccCCCCCHHHHHHHHHHHHhcCCcc--ccccCCHHHHHHHHHHHhhC--CCCcCEEEEeCCchH
Confidence 38889999877522 1232 67999999999987532111 00011223334444443311 223469999999999
Q ss_pred HHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCCCC-----CCCHH
Q 019298 112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGW-----EVDLD 164 (343)
Q Consensus 112 al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~d~~ 164 (343)
|++.+++.... + ..+|+...-+|++....+... +. .+..++... ..+ .-+++
T Consensus 116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~l~ 194 (429)
T PRK06173 116 AVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPS-IKFGEEWNDEAIE 194 (429)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCC-cccchhHHHHHHH
Confidence 99999887531 2 257888888887753322221 10 011111100 000 01356
Q ss_pred HHHhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298 165 DIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (343)
Q Consensus 165 ~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 239 (343)
.+++.+.. +..+.++.-| ..-.|.. .+.+.++++.++|++||+++|+||++.++...+... ....++-.+. |+
T Consensus 195 ~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PD-iv 272 (429)
T PRK06173 195 PLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLF-ALEHAGVVPD-IM 272 (429)
T ss_pred HHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcch-HHHhcCCCCC-EE
Confidence 67776642 2344455555 5666776 688999999999999999999999998764444321 1111222222 44
Q ss_pred EccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh-----h-hccccCcchHHHHHHHhccchhhHHHHH--HHHH
Q 019298 240 LGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-----Y-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNF 310 (343)
Q Consensus 240 ~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~-----~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~ 310 (343)
+ ++|.++ .| +.++.++++ +++.+.+.. . ...++..++++.+++ .+.|+ .+.+ .+++
T Consensus 273 ~--~gK~l~-gG~~p~~a~~~~--------~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa-~a~l~---~i~~~~~~~~ 337 (429)
T PRK06173 273 C--IGKALT-GGYLTLSATITT--------EAIAQTICSGEAKCFMHGPTFMANPLACAIA-AESIR---LLLESPWQQN 337 (429)
T ss_pred E--eehhhh-CCccccceEEec--------HHHHHHHhcCCCCccccCCCCCcCHHHHHHH-HHHHH---HHHhCCHHHH
Confidence 3 899974 56 467777774 356666642 1 112344566666666 34332 1111 5666
Q ss_pred HHHHHHHHHHhhcC
Q 019298 311 LENFAGSCVPSYKL 324 (343)
Q Consensus 311 ~~~~~~~~~~~L~~ 324 (343)
++++-+.+.+.|+.
T Consensus 338 ~~~~g~~l~~~L~~ 351 (429)
T PRK06173 338 IQRIEAQLKQELAP 351 (429)
T ss_pred HHHHHHHHHHHHHH
Confidence 67777777776654
No 331
>PRK06062 hypothetical protein; Provisional
Probab=99.38 E-value=1.3e-10 Score=109.27 Aligned_cols=245 Identities=16% Similarity=0.118 Sum_probs=146.6
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|.-. ..++ .+|.+.+++++++..... +.+ ....+.+..+++.+.... +-..+.+++++++++
T Consensus 51 dG~~ylD~~~g~~~--~~lGh~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGsE 123 (451)
T PRK06062 51 EGRRYLDFSSQLVN--TNIGHQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERA--PGDLSKVFFTNGGAD 123 (451)
T ss_pred CCCEEEEcccCHHh--hcCCCCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhC--CCCCCEEEEcCChHH
Confidence 38899999887633 1233 779999999999875321 111 112334444555554322 222469999999999
Q ss_pred HHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Cce-----------eEEeecCCCCC--CC--CC-------HHHH
Q 019298 112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HIE-----------VRHFDLLPDKG--WE--VD-------LDDI 166 (343)
Q Consensus 112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~~-----------~~~~~~~~~~~--~~--~d-------~~~l 166 (343)
|.+.+++.... ...+|+...-+|++....+... +.. +..++...... +. -| ++.+
T Consensus 124 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 203 (451)
T PRK06062 124 ANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHL 203 (451)
T ss_pred HHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHH
Confidence 99999887532 2357888888887765444332 111 11111110000 10 02 5667
Q ss_pred HhhhcC---CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEc
Q 019298 167 ESLADQ---NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG 241 (343)
Q Consensus 167 ~~~~~~---~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~ 241 (343)
++.+.. +..+.++.-| ....|.+ .+.+.++++.++|++||+++|+||++.+|...+... ....++-.+. +.
T Consensus 204 e~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~~~~gv~PD---i~ 279 (451)
T PRK06062 204 ERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF-AIEHFGVVPD---LI 279 (451)
T ss_pred HHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH-HHHhcCCCCC---ee
Confidence 776642 2334555556 5566776 577899999999999999999999999875444321 1111222222 33
Q ss_pred cCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh---hccccCcchHHHHHHHhccc
Q 019298 242 SLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQVCIMYGCL 298 (343)
Q Consensus 242 S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~~l 298 (343)
+++|.++ .| +.+|.+++++ ++.+.+... ...+++.++.+.+++ .+.|
T Consensus 280 t~gK~lg-gG~~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnpl~~Aaa-~a~L 330 (451)
T PRK06062 280 TFAKGVN-SGYVPLGGVAISE--------AIAATFADRPYPGGLTYSGHPLACAAA-VATI 330 (451)
T ss_pred eechhhh-cCCcCcEEEEEcH--------HHHHHhccCCCCCCCCCCCCHHHHHHH-HHHH
Confidence 5799965 46 4899988853 566666432 222456677777666 4443
No 332
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.38 E-value=1.3e-10 Score=108.60 Aligned_cols=269 Identities=14% Similarity=0.095 Sum_probs=154.6
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC--CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG--YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++++||..|.-.... -..+|++.++++++++...... +.......++-+.+++.+ +-.-+.+++++++++
T Consensus 44 G~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~------~~~~~~v~f~~sGse 116 (427)
T TIGR00508 44 GRRLIDGMSSWWAAIH-GYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMT------PNALDCVFLADSGSV 116 (427)
T ss_pred CCEEEEccchHHHhcC-CCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhC------CCCCCEEEEeCCcHH
Confidence 7889999887533211 2378999999999887532111 111111233334444433 222369999999999
Q ss_pred HHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhc-Cce-------------eEEeecCCCCCCC-----CCHH
Q 019298 112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFR-HIE-------------VRHFDLLPDKGWE-----VDLD 164 (343)
Q Consensus 112 al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~~~~-----~d~~ 164 (343)
++..+++.... + ..+|+...-+|.+....+... +.. ...++. +...+. -|++
T Consensus 117 A~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~ 195 (427)
T TIGR00508 117 AVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAIT 195 (427)
T ss_pred HHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHHH
Confidence 99999886531 2 257888888887764433332 211 001111 001110 1456
Q ss_pred HHHhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298 165 DIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (343)
Q Consensus 165 ~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 239 (343)
++++.+.. +..+.++..| .+-.|.. .+.+.+++|.++|++||+++|+||++.++...+... ....++-... |+
T Consensus 196 ~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~-~~~~~~v~pD-i~ 273 (427)
T TIGR00508 196 PLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLF-ACEHAGVVPD-IL 273 (427)
T ss_pred HHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccc-hhhhcCCCCC-EE
Confidence 66666642 2344555555 4555554 578999999999999999999999997765544321 1111221222 44
Q ss_pred EccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhh------hccccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298 240 LGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE 312 (343)
Q Consensus 240 ~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~ 312 (343)
+ ++|.+ ..|+ .++.++++ +++.+.++.. ...++..++++.+++ .+.|+...+ .+..++++
T Consensus 274 ~--~gK~l-~gG~~p~~a~~~~--------~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa-~a~l~~l~~-~~~~~~~~ 340 (427)
T TIGR00508 274 C--VGKAL-TGGYMTLSATVTT--------DKVAQTISSGEAGCFMHGPTFMGNPLACAVA-EASLAILLE-GEWQKQVS 340 (427)
T ss_pred E--echhh-hcCcccceEEEEc--------HHHHHHHhcCCCCccccCCCCCcCHHHHHHH-HHHHHHHHh-CCHHHHHH
Confidence 3 79997 4664 67777764 3677777542 112334567766666 444431100 01566777
Q ss_pred HHHHHHHHhhcCC
Q 019298 313 NFAGSCVPSYKLI 325 (343)
Q Consensus 313 ~~~~~~~~~L~~~ 325 (343)
++.+.+.+.|+++
T Consensus 341 ~~~~~l~~~L~~l 353 (427)
T TIGR00508 341 AIENQLKRELSPL 353 (427)
T ss_pred HHHHHHHHHHHHh
Confidence 7777777777654
No 333
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.37 E-value=4.9e-10 Score=105.29 Aligned_cols=268 Identities=14% Similarity=0.043 Sum_probs=156.5
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+++.++|+..|.-. ..++ .+|.+.+++++++..... ... ....+.+..+++.+.+..+ ...+.++++++++
T Consensus 52 dG~~ylD~~~g~~~--~~lGh~~p~v~~Ai~~ql~~~~~~~~~---~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGs 124 (453)
T PRK06943 52 DGRRYLDAISSWWV--NLFGHANPRINAALKDQLDTLEHAMLA---GCTHEPAIELAERLAALTG--GTLGHAFFASDGA 124 (453)
T ss_pred CCCEEEEcchHHHH--hcCCCCCHHHHHHHHHHHHhcCCcccc---ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCCH
Confidence 38889999877532 1233 789999999999875311 111 1112344455555543222 1235899999999
Q ss_pred HHHHHHHHHhc-------CC-CCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCC--CC-------
Q 019298 111 QAIDVAMALLS-------RP-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKG--WE------- 160 (343)
Q Consensus 111 ~al~~~~~~l~-------~~-gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~------- 160 (343)
+|++.+++... .+ ..+|+...-+|++....+..... .+..++.....+ +.
T Consensus 125 eAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 204 (453)
T PRK06943 125 SAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVA 204 (453)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHH
Confidence 99999998762 12 36788888888775433322211 111222111000 00
Q ss_pred -CCHHHHHhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 161 -VDLDDIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 161 -~d~~~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
-+++.+++.+.. +..+.++.-| ....|.. .+.+.++++.++|++||+++|.||++.++...+.- .....++-.
T Consensus 205 ~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~-fa~~~~gv~ 283 (453)
T PRK06943 205 ARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTF-FACEQAGVW 283 (453)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcch-hHHHhCCCC
Confidence 124666666642 2334445555 5666764 67899999999999999999999999988554432 111222222
Q ss_pred CCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh-------hhccccCcchHHHHHHHhccchhhHHHHH
Q 019298 235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-------YFDILGDPATFIQVCIMYGCLSTIMQIMI 306 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~a~~~~~l~~~~~~l~ 306 (343)
++++ +++|.++ .| +.+|.+++++ ++.+.+.. ....+++.++++.+++ .+.|+ .+.+
T Consensus 284 PDiv---t~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa-~a~L~---~i~~ 347 (453)
T PRK06943 284 PDFL---CLSKGIS-GGYLPLSLVLSRD--------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAA-LATLD---LFAE 347 (453)
T ss_pred CCeE---eeehhhc-cCcccceEEEEcH--------HHHHhhcccCccCCccCCCCCCCCHHHHHHH-HHHHH---HHHh
Confidence 3333 3599966 57 5899999853 56665542 1223456677776666 34432 1212
Q ss_pred --HHHHHHHHHHHHHHhhcC
Q 019298 307 --HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 307 --~~~~~~~~~~~~~~~L~~ 324 (343)
..++.+++-+.+.+.|++
T Consensus 348 ~~l~~~~~~~G~~l~~~L~~ 367 (453)
T PRK06943 348 DDVLARNARKSARLRAALAP 367 (453)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 445555555555555544
No 334
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.37 E-value=4.3e-11 Score=115.60 Aligned_cols=162 Identities=15% Similarity=0.116 Sum_probs=117.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 157 (343)
..+..+.+|+.| ..+ ..++++|+|.++..++.+++.+||+|++++.||-+..+.+...|+..+++.... +
T Consensus 197 i~eAe~~AA~~f--------gAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~r-n 267 (714)
T PRK15400 197 HKEAEEYIARVF--------NADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTR-N 267 (714)
T ss_pred HHHHHHHHHHHh--------CCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-c
Confidence 356667777777 344 567899999999999999999999999999999999999999999999986543 2
Q ss_pred CCC----CC-----HHHHHhhhcCC-----ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc-cCC
Q 019298 158 GWE----VD-----LDDIESLADQN-----TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGD 222 (343)
Q Consensus 158 ~~~----~d-----~~~l~~~~~~~-----~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~-~~~ 222 (343)
.++ ++ .+.+++.+... +..+++++| +-.|.+++. ++|++.|..++ +++||||+... |..
T Consensus 268 ~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~---~~I~~~~~~~~--ilvDEAwgah~~F~p 341 (714)
T PRK15400 268 AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNT---DFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (714)
T ss_pred ccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCH---HHHHHHhCCCC--EEEEccchhhhccCc
Confidence 322 34 78888888642 226778888 668999654 66666776776 68999999753 332
Q ss_pred C--CCCccccc-CCCCCEEEEccCccccCCCCCcEEEE
Q 019298 223 K--PFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 223 ~--~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
. +..++... ++++.++++.|.+|+ ++|+.-+.+
T Consensus 342 ~~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~ 377 (714)
T PRK15400 342 IYEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASM 377 (714)
T ss_pred ccCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhH
Confidence 1 11222211 122456999999999 677666654
No 335
>PRK07481 hypothetical protein; Provisional
Probab=99.36 E-value=5.1e-10 Score=105.19 Aligned_cols=271 Identities=15% Similarity=0.122 Sum_probs=153.8
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++++++|+..|.-.. .++ .+|.+.+++++++.+........ ....+.+..+++.+....+ +-..+.+++++++++
T Consensus 40 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~ql~~~~~~~~~~-~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~sGsE 115 (449)
T PRK07481 40 DGKKLLDGVGGLWNV--NVGHNREEVKEAIVRQLDELEYYSTFD-GTTHPRAIELSYELIDMFA-PEGMRRVFFSSGGSD 115 (449)
T ss_pred CCCEEEECchhHHhh--cCCCCCHHHHHHHHHHHHhccceeccc-ccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCchHH
Confidence 388899998775332 233 77999999999987532111000 1122344445555543221 112468999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCC--CCC-CCHHHH-
Q 019298 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDK--GWE-VDLDDI- 166 (343)
Q Consensus 112 al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~-~d~~~l- 166 (343)
|++.+++.... +| .+|+...-+|++....+..... .+..++..... .+. -|.+.+
T Consensus 116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~ 195 (449)
T PRK07481 116 SVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELA 195 (449)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHH
Confidence 99999987531 23 5788888888876543332211 11112111000 011 133333
Q ss_pred -------Hhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 167 -------ESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 167 -------~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
++.+. .+..+.++..| ..-.|.. .+.+.++++.++|++||+++|.||++.++...+... ....++-.
T Consensus 196 ~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~ 274 (449)
T PRK07481 196 RICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWF-GSRGWGVK 274 (449)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhh-HhhhcCCC
Confidence 33332 13334455556 5556765 577889999999999999999999999875544321 11222222
Q ss_pred CCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHHH
Q 019298 235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQIM 305 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~l 305 (343)
++++ +++|.++ .| +.+|.+++++ ++.+.+... ...+++.++++.+++ .+.|+ .+.
T Consensus 275 PDiv---~~gKgl~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa-~a~L~---~l~ 338 (449)
T PRK07481 275 PDIM---CLAKGIT-SGYVPLGATMVNA--------RIADAFEANADFGGAIMHGYTYSGHPVACAAA-LATLD---IVV 338 (449)
T ss_pred CCEE---EEeeccc-CCCcCceEEEEcH--------HHHHHHhccCccccccccCCCCCCCHHHHHHH-HHHHH---HHH
Confidence 2333 3599964 46 5899998853 566665421 223456677776666 44432 111
Q ss_pred H--HHHHHHHHHHHHHHhhcC
Q 019298 306 I--HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 306 ~--~~~~~~~~~~~~~~~L~~ 324 (343)
+ ..++.++.-+.+.+.|++
T Consensus 339 ~~~l~~~~~~~g~~l~~~L~~ 359 (449)
T PRK07481 339 REDLPANAAKRGAYLLEGLQP 359 (449)
T ss_pred hhhHHHHHHHHHHHHHHHHHH
Confidence 1 445555555555555543
No 336
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=1.7e-11 Score=109.04 Aligned_cols=253 Identities=12% Similarity=0.096 Sum_probs=166.4
Q ss_pred CCCcHHHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298 51 FHTTHVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL 128 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl 128 (343)
.+..+.+.+++...--. ..-..-+...-+.++++.+|+|++ .++.+++.-| -......+-.|+++|.-|+
T Consensus 154 g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-------~e~a~vF~mG-f~TNs~~~p~l~~~gsLIi 225 (519)
T KOG1357|consen 154 GPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-------VEDAIVFSMG-FATNSMNIPSLLGKGSLII 225 (519)
T ss_pred CcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-------CcceEEEecc-ccccccCcceeecCCccee
Confidence 34566666666554211 011111222234667777777774 4677777766 5555566778889999999
Q ss_pred EeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-------C-----ceEEEEe-CCCCCcccccCHHHH
Q 019298 129 LPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------N-----TVALVII-NPGNPCGNVYSYQHL 195 (343)
Q Consensus 129 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~-----~~~i~~~-~p~nptG~~~~~~~l 195 (343)
..+-.|......++..|+.++.+..+ |...||+.+++ + .+++++. .-...-|.+ -.+
T Consensus 226 SDelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~i---v~L 295 (519)
T KOG1357|consen 226 SDELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTI---VDL 295 (519)
T ss_pred eccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCee---ccc
Confidence 99999999999999999998888653 45555554432 1 1233333 335677877 678
Q ss_pred HHHHHHHhhcCcEEEEccCCCccccC--CCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 196 QKLAETANKLKTLVIADEVYGHLVFG--DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 196 ~~l~~~~~~~~~~~i~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
.+++.+++++...++.||++.....+ +....-+...++.+..|.+++|+|+|++.| ||+.+++ ++++
T Consensus 296 p~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk--------~lid 364 (519)
T KOG1357|consen 296 PEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSK--------ELID 364 (519)
T ss_pred HHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcH--------HHHh
Confidence 88999999999999999999976553 233333334455556799999999999998 9998864 6788
Q ss_pred HHhhhhc----cccCcchHHHHHHHhccch----hhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298 274 RMKKYFD----ILGDPATFIQVCIMYGCLS----TIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKST 334 (343)
Q Consensus 274 ~l~~~~~----~~~~~~~~~~~a~~~~~l~----~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~ 334 (343)
.++.... .+..+++.+|... .++-. +.....+ ..++++++..+++..|+.. |+.+....
T Consensus 365 ~lrt~s~~~~yat~~sppvaqq~~-ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~~ 432 (519)
T KOG1357|consen 365 YLRTPSPSALYATSLSPPVAQQIL-TSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVYGNN 432 (519)
T ss_pred hhccCCCceeecccCChHHHHHHH-HHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecCC
Confidence 7765522 2345566666555 22110 1112222 7888899999999988887 66654433
No 337
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.35 E-value=2.4e-10 Score=104.44 Aligned_cols=241 Identities=12% Similarity=0.003 Sum_probs=150.4
Q ss_pred CCCcHHHHHHHHHHHhcC---CCCCCCCC-------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEe-cChHHHHHHHHHH
Q 019298 51 FHTTHVATEAVAEALLSE---KFNGYAPT-------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVT-SGCTQAIDVAMAL 119 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~---~~~~Y~~~-------~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~-~g~~~al~~~~~~ 119 (343)
...++.+++++...+.+. ....+... .-..+.++.+++++ +. -+..+++++ .+++.+++.++..
T Consensus 12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~----~~-~~~~~v~~~~gsgt~~~Ea~~~n 86 (360)
T PRK05355 12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELL----NI-PDNYKVLFLQGGASLQFAMVPMN 86 (360)
T ss_pred CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CC-CCCcEEEEEcCCchHHHHHHHHh
Confidence 567899999998876321 11112111 11234555555555 22 122356555 6679999999999
Q ss_pred hcCCCCeEEEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHh-hhcCCceEEEEeCCCCCcccccCHHHHH
Q 019298 120 LSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQ 196 (343)
Q Consensus 120 l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~~~~~~~~i~~~~p~nptG~~~~~~~l~ 196 (343)
++.+|+++++..-+..+ +...++.+|.. ..+...+..+ ..+..++++ .++++++.|.+++..+.||+..+ ++.
T Consensus 87 l~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g-~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~ 162 (360)
T PRK05355 87 LLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDG-FTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELP 162 (360)
T ss_pred cCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccC-CCCCCChhhccCCCCCCEEEEccCCCcceEecC--ccc
Confidence 99999988877655533 34566777854 5454332223 234444444 66778899999999999999974 355
Q ss_pred HHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh
Q 019298 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK 276 (343)
Q Consensus 197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~ 276 (343)
++ +|+++|+|.+.+.. ..+..+..+ + +++.|..|.+|.+| +|.+.++++ ..+++.
T Consensus 163 ~i------~g~l~vVDavss~g----~~~idv~~~---d--~~~~ssqK~lgP~G--lg~l~~s~~--------~l~~~~ 217 (360)
T PRK05355 163 DT------GDVPLVADMSSDIL----SRPIDVSKF---G--LIYAGAQKNIGPAG--LTIVIVRED--------LLGRAL 217 (360)
T ss_pred cc------CCCcEEEEcCcccc----CccCCHHHc---c--EEEEeccccccCCc--eEEEEECHH--------HHhhcc
Confidence 44 79999999999863 222333322 2 88889999998777 788887653 332222
Q ss_pred h-----------hh--ccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhhcCCC
Q 019298 277 K-----------YF--DILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSYKLIP 326 (343)
Q Consensus 277 ~-----------~~--~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L~~~~ 326 (343)
. .. ...+.++.....++ .++|+...+. ++ ..++.++..+.+++.|++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL-~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~ 282 (360)
T PRK05355 218 PSIPSMLDYKTHADNDSMYNTPPTFAIYLA-GLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSD 282 (360)
T ss_pred cCCChHHHHHHHHhcCCccCCCcHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 11 11233344444444 5555543322 33 88888899999999999885
No 338
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.35 E-value=3e-10 Score=106.95 Aligned_cols=268 Identities=15% Similarity=0.078 Sum_probs=155.9
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
+++++|+..|.-.. +.-..+|++.++++++++... ..... ...+.+..+++.+.... +...+.+++++++++|
T Consensus 55 G~~ylD~~~g~~~~-~lGh~~p~v~~Ai~~ql~~l~~~~~~~---~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGseA 128 (460)
T PRK06916 55 GNEYYDGVSSIWLN-VHGHQVPELDEAIREQLNKIAHSTLLG---LANVPSILLAEKLIEVV--PEGLKKVFYSDSGATA 128 (460)
T ss_pred CCEEEEcchhHHHh-hcCCCCHHHHHHHHHHHHhCCCccccc---cCCHHHHHHHHHHHHhC--CCCCCEEEEeCCcHHH
Confidence 78889997775221 112378999999999987521 11110 11233344444443322 2223689999999999
Q ss_pred HHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCC--CCC--------C
Q 019298 113 IDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDK--GWE--------V 161 (343)
Q Consensus 113 l~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~--------~ 161 (343)
++.+++.... + ..+|+...-+|++....+...+. .+..++..... .+. -
T Consensus 129 ve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~ 208 (460)
T PRK06916 129 VEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKK 208 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHH
Confidence 9999987542 3 26788888888776544333211 11122111000 001 1
Q ss_pred CHHHHHhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC
Q 019298 162 DLDDIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236 (343)
Q Consensus 162 d~~~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~ 236 (343)
+++.+++.++. +..+.++.-| ..-.|.. .+.+.++++.++|++||+++|.||++.++...+... ....++-.+.
T Consensus 209 ~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~-a~~~~gv~PD 287 (460)
T PRK06916 209 HLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF-ACEHENVTPD 287 (460)
T ss_pred HHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh-HHHhcCCCCC
Confidence 24566666642 2334455555 5666766 588999999999999999999999998875444321 1122222223
Q ss_pred EEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh--------hhccccCcchHHHHHHHhccchhhHHHHH-
Q 019298 237 ILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK--------YFDILGDPATFIQVCIMYGCLSTIMQIMI- 306 (343)
Q Consensus 237 ~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~~~l~~~~~~l~- 306 (343)
|+ +++|.++ .| +.+|.+++++ ++.+.+.. ....+++.++++.+++ .+.|+ .+.+
T Consensus 288 -iv--~~gK~l~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa-~a~l~---~l~~~ 351 (460)
T PRK06916 288 -IM--TAGKGLT-GGYLPIAITVTTD--------EIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVA-LANLE---LYEKT 351 (460)
T ss_pred -ee--eeehhhh-cCccccceeeecH--------HHHHHhhccccccCccccCCCCCCCHHHHHHH-HHHHH---HHHhc
Confidence 33 4699965 57 5899999853 56655431 1222445677776666 44432 1112
Q ss_pred -HHHHHHHHHHHHHHhhcC
Q 019298 307 -HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 307 -~~~~~~~~~~~~~~~L~~ 324 (343)
..++++++-+.+.+.|++
T Consensus 352 ~l~~~~~~~g~~l~~~l~~ 370 (460)
T PRK06916 352 NLIEQVARKTEYVATQLED 370 (460)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 556666666666666654
No 339
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.35 E-value=2e-10 Score=97.80 Aligned_cols=208 Identities=16% Similarity=0.095 Sum_probs=140.2
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-Cce
Q 019298 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTV 175 (343)
Q Consensus 99 ~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~ 175 (343)
.+.-.++..+++.+++.++-.+++|||.|++....-.+ +.+.++.+|+++..++.+ -+....++.+.+.+.+ +++
T Consensus 67 n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~--~G~~~~le~i~~~lsqh~p~ 144 (385)
T KOG2862|consen 67 NAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEAD--IGQAVPLEEITEKLSQHKPK 144 (385)
T ss_pred CCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecC--cccCccHHHHHHHHHhcCCc
Confidence 33456677778999999999999999999877655433 456788899999999765 4556899999998865 788
Q ss_pred EEEEeCCCCCcccccCHHH-HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC-CCCc
Q 019298 176 ALVIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWR 253 (343)
Q Consensus 176 ~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r 253 (343)
++++++....||+. ++ +..+.++|++|+.++++|.+.+... . ... .++.+-.+....-.|++++ +|+.
T Consensus 145 ~vfv~hgdsSTgV~---q~~~~~~g~lc~k~~~lllVD~VaSlgg---t-~F~---mDewgVDvaytgSQKaL~aP~GLs 214 (385)
T KOG2862|consen 145 AVFVTHGDSSTGVL---QDLLAISGELCHKHEALLLVDTVASLGG---T-EFE---MDEWGVDVAYTGSQKALGAPAGLS 214 (385)
T ss_pred eEEEEecCcccccc---chHHHHHHHHhhcCCeEEEEechhhcCC---c-cce---ehhhcccEEEecchhhcCCCCCcc
Confidence 99999999999999 55 6778889999999999999987521 1 112 2333322444455899887 4543
Q ss_pred EEEEEEeCCCCCCCchHHHHHHhhhh-----------------------ccccCcchHHHHHHHhccchhh-HHHHH-HH
Q 019298 254 LGWFVTTDPCGMFRKPKVVERMKKYF-----------------------DILGDPATFIQVCIMYGCLSTI-MQIMI-HG 308 (343)
Q Consensus 254 ~G~i~~~~~~~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~a~~~~~l~~~-~~~l~-~~ 308 (343)
-+..++ ...+++++.. ..+...++........++|... .+-++ ..
T Consensus 215 --iisfS~--------ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~ 284 (385)
T KOG2862|consen 215 --IISFSD--------KALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSW 284 (385)
T ss_pred --eeecCH--------HHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344432 2334443321 1122333333322225555432 22233 88
Q ss_pred HHHHHHHHHHHHhhcCCCCce
Q 019298 309 NFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 309 ~~~~~~~~~~~~~L~~~~g~~ 329 (343)
++.++..+.+...|+.+ |++
T Consensus 285 ~rH~e~s~~l~~~l~~~-GLq 304 (385)
T KOG2862|consen 285 RRHREMSKWLKLSLEAL-GLQ 304 (385)
T ss_pred HHHHHHHHHHHHHHHHh-Ccc
Confidence 88999999999988887 655
No 340
>PRK06917 hypothetical protein; Provisional
Probab=99.34 E-value=7.5e-10 Score=103.95 Aligned_cols=269 Identities=16% Similarity=0.077 Sum_probs=155.9
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++++++|+..|.-. ..++ .+|.+.+++++++..... .+.. .-..+.+..+++.+.... +-..+.+++++++++
T Consensus 29 dG~~ylD~~~g~~~--~~lGh~hp~v~~Ai~~ql~~~~~-~~~~-~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGsE 102 (447)
T PRK06917 29 NGNKYFDGSSGAVT--AGIGHGVKEIADAIKEQAEEVSF-VYRS-QFTSEPAEKLAKKLSDLS--PGDLNWSFFVNSGSE 102 (447)
T ss_pred CCCEEEECchhHHh--ccCCCCCHHHHHHHHHHHhhCcC-cccc-ccCCHHHHHHHHHHHHhC--CCCCCEEEEeCChHH
Confidence 38899999888533 1233 689999999999886422 1111 011234445555554322 222358999999999
Q ss_pred HHHHHHHHhc-------CC-CCeEEEeCCCCcchHHHHHhc-Cce------------eEEeecCCCCC--CCC-------
Q 019298 112 AIDVAMALLS-------RP-GANILLPRPGFPIYELSAAFR-HIE------------VRHFDLLPDKG--WEV------- 161 (343)
Q Consensus 112 al~~~~~~l~-------~~-gd~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~~~~--~~~------- 161 (343)
|++.+++... .+ ..+|+...-+|++....+... +.. +..++...... +.-
T Consensus 103 Ave~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 182 (447)
T PRK06917 103 ANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQL 182 (447)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHH
Confidence 9999998762 12 267888888888765544332 211 11111100000 000
Q ss_pred -CHHHHHhhhcC---CceEEEEeCC-C-CCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 162 -DLDDIESLADQ---NTVALVIINP-G-NPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 162 -d~~~l~~~~~~---~~~~i~~~~p-~-nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
+++.+++.+.. +..+.++.-| . +-.|.. .+.+.+++|.++|++||+++|.||++.+|...+... ....++-.
T Consensus 183 ~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~-a~~~~gv~ 261 (447)
T PRK06917 183 ACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMF-AMEHWGVE 261 (447)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchh-hHHhcCCC
Confidence 23556666642 2345555566 3 344554 678999999999999999999999999874444321 11122222
Q ss_pred CCEEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhhHHHHH--
Q 019298 235 VPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTIMQIMI-- 306 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~~~~l~-- 306 (343)
++ | .+++|.++ .|. .+|.+++++ ++.+.+... ...+++.++++.+++ .+.|+. +.+
T Consensus 262 PD-i--~~~gK~l~-~G~~Pi~a~~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa-~a~l~~---l~~~~ 325 (447)
T PRK06917 262 PD-I--MTLGKGLG-AGYTPIAATVVSD--------RVMEPILRGSRSIMSGHTLSANPLSAATA-LAVLEY---MEKHN 325 (447)
T ss_pred CC-E--EEeeehhc-cCCcceEEEEEcH--------HHHHHHhccCcccccccCCCCCHHHHHHH-HHHHHH---HHHCC
Confidence 23 3 35699964 564 899998853 566665431 122456677776666 444331 112
Q ss_pred HHHHHHHHHHHHHHhhcC
Q 019298 307 HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 307 ~~~~~~~~~~~~~~~L~~ 324 (343)
..++++++-+.+.+.|++
T Consensus 326 l~~~~~~~g~~l~~~L~~ 343 (447)
T PRK06917 326 LPEKAAEKGEYLIKGLQK 343 (447)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455555555555555543
No 341
>PRK07036 hypothetical protein; Provisional
Probab=99.34 E-value=6.1e-10 Score=105.03 Aligned_cols=269 Identities=14% Similarity=0.120 Sum_probs=155.3
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+++.++|+..|.-.. .++ .+|++.+++++++.... ...+. ....+.+..+++.+.... +-..+.++++++++
T Consensus 49 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGs 122 (466)
T PRK07036 49 DGRRYLDGIGGMWCV--NVGYGREEMADAIADQARRLPYYTPFG--DMTNAPAAELAAKLAELA--PGDLNHVFLTTGGS 122 (466)
T ss_pred CCCEEEECcccHHhh--cCCCCCHHHHHHHHHHHHhCccccccc--ccCCHHHHHHHHHHHHhC--CCCcCEEEEeCCch
Confidence 388899998775332 133 68999999999987531 11121 012244455555554322 22346899999999
Q ss_pred HHHHHHHHHhc------C-C-CCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCC--CCCCCC-----
Q 019298 111 QAIDVAMALLS------R-P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPD--KGWEVD----- 162 (343)
Q Consensus 111 ~al~~~~~~l~------~-~-gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~~d----- 162 (343)
+|++.+++... . + ..+|+...-+|++....+..... .+..++.... ...+.+
T Consensus 123 eAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 202 (466)
T PRK07036 123 TAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFC 202 (466)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHH
Confidence 99999988752 1 1 25788888888776544332211 1122211100 001111
Q ss_pred ---HHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc-ccCC
Q 019298 163 ---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG-VFGS 233 (343)
Q Consensus 163 ---~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~-~~~~ 233 (343)
.+.+++.+. .+..+.++..| ....|.. .+++.++++.++|++||+++|+||++.+|...+.. ..+. .++-
T Consensus 203 ~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~-~~~~~~~gv 281 (466)
T PRK07036 203 DFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHF-FASEAVFGI 281 (466)
T ss_pred HHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchh-hhhhhhcCC
Confidence 233444442 13344455555 5566775 57789999999999999999999999887544421 1111 1222
Q ss_pred CCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHH
Q 019298 234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQI 304 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~ 304 (343)
.+. |+ +++|.++ .| +.+|.+++++ ++.+.+... ...+++.++++.+++ .+.|+ .+
T Consensus 282 ~PD-iv--t~gK~l~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa-~a~Le---~i 345 (466)
T PRK07036 282 QPD-II--TFAKGLT-SGYQPLGAVIISE--------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAA-LKNIE---IM 345 (466)
T ss_pred CCC-EE--EEccccc-cCccccEEEEEcH--------HHHHHHhcccCcCcccccCCCCCCCHHHHHHH-HHHHH---HH
Confidence 222 33 5699964 57 5899999853 666665421 122456677776666 44432 12
Q ss_pred HH--HHHHHHHHHHHHHHhhcC
Q 019298 305 MI--HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 305 l~--~~~~~~~~~~~~~~~L~~ 324 (343)
.+ ..++++++-+.+.+.|+.
T Consensus 346 ~~~~l~~~~~~~g~~l~~~L~~ 367 (466)
T PRK07036 346 EREGLCEHVREVGPYFEERLAS 367 (466)
T ss_pred HhCCHHHHHHHHHHHHHHHHHH
Confidence 12 555666666666665544
No 342
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.34 E-value=1.8e-10 Score=104.46 Aligned_cols=262 Identities=16% Similarity=0.141 Sum_probs=154.9
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||..+.-. .+++ .+|.+.+++++++..... ........+...++++.+.+..+ -..+++++++++++
T Consensus 14 dG~~~lD~~~~~~~--~~lGh~~p~i~~ai~~~~~~~~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGse 87 (339)
T PF00202_consen 14 DGREYLDFMSGYGS--VNLGHNHPEIAEAIAEQANKLNY--VSFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGSE 87 (339)
T ss_dssp TSEEEEESSHHHHT--TTT-BT-HHHHHHHHHHHHHCSS--CSTTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHHH
T ss_pred CCCEEEECCCCccc--eecCCCccccchhHHHHhhhccc--ccccceeccchhhhhhhhhhccc--cccceeeeccCchH
Confidence 37889999877533 2244 679999999998875422 11123334556666666655442 25579999999999
Q ss_pred HHHHHHHHhc------C--CCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCCCCCCHHH-----
Q 019298 112 AIDVAMALLS------R--PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDD----- 165 (343)
Q Consensus 112 al~~~~~~l~------~--~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~----- 165 (343)
|++.+++... . ...+|+...-+|++....+...+. .+..++.. +...
T Consensus 88 Ave~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~~~ 160 (339)
T PF00202_consen 88 AVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP-------DPAADEEEQ 160 (339)
T ss_dssp HHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT-------CHHHHHHHH
T ss_pred HHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC-------ccchhhhHH
Confidence 9999998876 1 336899999899775443333211 12333332 2222
Q ss_pred -----HHhh---hcCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298 166 -----IESL---ADQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (343)
Q Consensus 166 -----l~~~---~~~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~ 235 (343)
+++. ...+..+.++..| ....|.. .+.+.+++|.++|++||+++|+||++.++...+... ....++-.+
T Consensus 161 ~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~~~~gv~P 239 (339)
T PF00202_consen 161 ACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-ASEHYGVDP 239 (339)
T ss_dssp HHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-GHHHHTSSS
T ss_pred HHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-ceecccccC
Confidence 2222 2223334455555 4555655 567899999999999999999999999986655432 222233333
Q ss_pred CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH--HHHHHH
Q 019298 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLE 312 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~ 312 (343)
. |++ ++|.++ .|+.+|.++++. ++.+.+... ...++..++++.+++ .+.|+ .+.+ ..++++
T Consensus 240 D-iv~--~gK~l~-gG~p~sav~~~~--------~i~~~~~~~~~~~T~~g~p~~~aaa-~~~l~---~~~~~~~~~~~~ 303 (339)
T PF00202_consen 240 D-IVT--FGKGLG-GGLPISAVLGSE--------EIMEAFQPGSHGSTFGGNPLSCAAA-LATLE---ILEEEDLLERVR 303 (339)
T ss_dssp S-EEE--EEGGGG-TTSSEEEEEEEH--------HHHTTSCTTSSTCTTTT-HHHHHHH-HHHHH---HHHHTTHHHHHH
T ss_pred c-ccc--cccchh-hhhhcccccccc--------hhhccccccccccccccchHhhhhh-hhHHH---hhccHHHHHHHH
Confidence 3 444 469965 459999999863 455544332 223556677776666 33332 1112 455555
Q ss_pred HHHHHHHHhhcC
Q 019298 313 NFAGSCVPSYKL 324 (343)
Q Consensus 313 ~~~~~~~~~L~~ 324 (343)
++-+.+.+.|+.
T Consensus 304 ~~g~~l~~~L~~ 315 (339)
T PF00202_consen 304 ELGERLREGLRE 315 (339)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555553
No 343
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.33 E-value=3.6e-10 Score=109.34 Aligned_cols=164 Identities=15% Similarity=0.093 Sum_probs=115.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG 158 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 158 (343)
..+..+.+|+.|+ .....++++|+|.++..++.+++.+||+|++++.||-+..+.+...|+..+++.... +.
T Consensus 197 i~eAe~~aA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~-n~ 268 (713)
T PRK15399 197 HLEAEEYIARTFG-------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR-NA 268 (713)
T ss_pred HHHHHHHHHHHhC-------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccc-cc
Confidence 3566677777773 234667899999999999999999999999999999999999999999999986543 22
Q ss_pred CC----CCH-----HHHHhhhcC-----CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEE-EEccCCCccc-cCC
Q 019298 159 WE----VDL-----DDIESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV-IADEVYGHLV-FGD 222 (343)
Q Consensus 159 ~~----~d~-----~~l~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~-i~D~ay~~~~-~~~ 222 (343)
++ ++. +.+++.+.+ +++++++++| +-.|.+++.++ |.+.| |+.+ ++||||+... |..
T Consensus 269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~---I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDW---IKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHH---HHHHh---CCCEEEEeccchhhhhcCc
Confidence 22 344 888888754 2357788887 66899976554 55555 4545 6999999743 332
Q ss_pred C--CCCccccc-CCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 223 K--PFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 223 ~--~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
. +..++... ..+.-++++.|.+|+ ++|+.-+.++-
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iH 379 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIH 379 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeee
Confidence 1 11222211 122345779999999 67777776543
No 344
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.33 E-value=7e-10 Score=104.54 Aligned_cols=269 Identities=14% Similarity=0.044 Sum_probs=156.9
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|.-.. .++ .+|.+.+++++++.+.... ... ....+.+..+++.+.... +...+.+++++++++
T Consensus 45 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~ql~~l~~~-~~~-~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGsE 118 (466)
T PRK07030 45 EGKRYLDAVSSWWVN--VFGHANPRINQRIKDQVDQLEHV-ILA-GFSHEPVIELSERLVKIT--PPGLSRCFYADNGSS 118 (466)
T ss_pred CCCEEEEcchhHHhh--cCCCCCHHHHHHHHHHHHhcCCc-ccc-ccCCHHHHHHHHHHHHhC--CCCcCEEEEeCCcHH
Confidence 388899998775331 133 6789999999998753110 000 112234444555554321 223469999999999
Q ss_pred HHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCC--CCCC-------
Q 019298 112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDK--GWEV------- 161 (343)
Q Consensus 112 al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~------- 161 (343)
|.+.+++.... + ..+|+...-+|++....+...+.. +..++..... .++.
T Consensus 119 Ave~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~ 198 (466)
T PRK07030 119 AIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSR 198 (466)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHH
Confidence 99999987521 2 357888888887765444332211 1112111000 0011
Q ss_pred -CHHHHHhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298 162 -DLDDIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (343)
Q Consensus 162 -d~~~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~ 235 (343)
+++.+++.+.. +..+.++..| ....|.. .+.+.++++.++|++||+++|.||++.++...+.- .....++-.+
T Consensus 199 ~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~-~a~~~~gv~P 277 (466)
T PRK07030 199 RMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTM-FACEQAGIRP 277 (466)
T ss_pred HHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccc-hHHHhcCCCC
Confidence 24556666642 2334455555 4555664 67789999999999999999999999988654432 1112222222
Q ss_pred CEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh--------hhccccCcchHHHHHHHhccchhhHHHHH
Q 019298 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK--------YFDILGDPATFIQVCIMYGCLSTIMQIMI 306 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~~~l~~~~~~l~ 306 (343)
.++ +++|.++ .| +.+|.+++++ ++.+.+.. ....++..++++.+++ .+.|+ .+.+
T Consensus 278 Div---~~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa-~a~L~---~i~~ 341 (466)
T PRK07030 278 DFL---CLSKALT-GGYLPLAAVLTTD--------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAA-LATLD---IFEQ 341 (466)
T ss_pred CEE---eeehhcc-CCcccceEEEecH--------HHHHHHhcccccccccccCCCCCCCHHHHHHH-HHHHH---HHHh
Confidence 333 3599965 58 5999999853 66666532 1223456678777666 44432 1222
Q ss_pred --HHHHHHHHHHHHHHhhcC
Q 019298 307 --HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 307 --~~~~~~~~~~~~~~~L~~ 324 (343)
..++.++.-+.+.+.|++
T Consensus 342 ~~l~~~~~~~G~~l~~~L~~ 361 (466)
T PRK07030 342 DNVIENNRALARRMAEATAH 361 (466)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 555566666666555544
No 345
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.33 E-value=1.1e-10 Score=102.06 Aligned_cols=176 Identities=22% Similarity=0.259 Sum_probs=113.2
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEE---ecChHHHHHHHHHHhcCCCCeEEE-eCCCCcchHHHH----------Hh
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGANILL-PRPGFPIYELSA----------AF 143 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~al~~~~~~l~~~gd~vl~-~~p~~~~~~~~~----------~~ 143 (343)
|-+.|.+..|+.| ..|..++ ..++++||.+++..+++|||+.+. ...-|.+..... +.
T Consensus 55 GRd~le~iyA~vf--------gaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e 126 (403)
T PF06838_consen 55 GRDKLERIYADVF--------GAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKE 126 (403)
T ss_dssp HHHHHHHHHHHHC--------T-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGG
T ss_pred cHHHHHHHHHHHh--------CchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHH
Confidence 4344555555554 3454444 356799999999999999999884 556676665544 55
Q ss_pred cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC-CCCcccccCHHHHHHHHHHHhhc--CcEEEEccCCCcccc
Q 019298 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP-GNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVF 220 (343)
Q Consensus 144 ~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~~~~~ 220 (343)
.|.....+++.+ +..+|.+.++++++++++++++... ...+-..++.++++++++++++. ++++++|++|++|+-
T Consensus 127 ~Gi~Y~~v~L~~--dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE 204 (403)
T PF06838_consen 127 FGIKYREVPLTE--DGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVE 204 (403)
T ss_dssp GT-EEEE--B-T--TSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTS
T ss_pred hCceeEEEeecC--CCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecc
Confidence 577788888764 4569999999999999999998755 55666678889999999999875 789999999999885
Q ss_pred CCCCCCcccccCCCCCEEEEccCccccCCC-CCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298 221 GDKPFVPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKY 278 (343)
Q Consensus 221 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~l~~~ 278 (343)
..++. .... .++.+|+-|+-|.. ...-||+++. .+++++....
T Consensus 205 ~~EP~----~vGA---Dl~aGSLIKNpGGgiAptGGYIaGr--------~~lVe~~a~R 248 (403)
T PF06838_consen 205 TQEPT----EVGA---DLMAGSLIKNPGGGIAPTGGYIAGR--------KDLVERAAYR 248 (403)
T ss_dssp SS-GG----GGT----SEEEEETTSGGGTTT-SS-EEEEES--------HHHHHHHHHH
T ss_pred ccCcc----ccch---hheeccceeCCCCCccCcCCEEech--------HHHHHHHHhh
Confidence 43321 1222 39999999996541 1345888884 4788877654
No 346
>PRK07480 putative aminotransferase; Validated
Probab=99.32 E-value=4.5e-10 Score=105.60 Aligned_cols=270 Identities=16% Similarity=0.129 Sum_probs=151.8
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++|+..|.-.. +++ .+|.+.+++++++....... .......+.+..+|+.+.... +...+++++++++++
T Consensus 48 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGse 122 (456)
T PRK07480 48 EGNKILDGMAGLWCV--NVGYGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVA--PPGFNHVFFTNSGSE 122 (456)
T ss_pred CCCEEEEccchHHHh--cCCCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhC--CCCcCEEEEeCCcHH
Confidence 388899998775331 133 68999999999987532110 000112344444555554322 223469999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhc-Cce------------eEEeecCC--CCCCCCC------
Q 019298 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HIE------------VRHFDLLP--DKGWEVD------ 162 (343)
Q Consensus 112 al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~--~~~~~~d------ 162 (343)
|++.+++.... +| .+|+...-+|++....+... |.. +..++... ...+..+
T Consensus 123 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 202 (456)
T PRK07480 123 ANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGL 202 (456)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHH
Confidence 99999887531 22 46888888887654322222 111 11111000 0000011
Q ss_pred --HHHHHhhhc-C--CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298 163 --LDDIESLAD-Q--NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (343)
Q Consensus 163 --~~~l~~~~~-~--~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~ 235 (343)
.+.+++.+. . +..+.++.-| ..-.|.. .+.+.+++|.++|++||+++|.||++.+|...+... ....++-.+
T Consensus 203 ~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~P 281 (456)
T PRK07480 203 AAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWF-GSQHFGIKP 281 (456)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-hhhhcCCCC
Confidence 255554442 1 2334444555 5556775 567889999999999999999999999875444321 122222222
Q ss_pred CEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh----h-hccccCcchHHHHHHHhccchhhHHHHH--H
Q 019298 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK----Y-FDILGDPATFIQVCIMYGCLSTIMQIMI--H 307 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~----~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~ 307 (343)
. | -+++|.++ .| +.+|.+++++ ++.+.+.. . ...+++.++++.+++ .+.|+ .+.+ .
T Consensus 282 D-i--v~~gK~l~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa-~a~L~---~l~~~~l 345 (456)
T PRK07480 282 D-L--MTIAKGLT-SGYIPMGAVGVGD--------RVAEVLIEEGGEFNHGFTYSGHPVAAAVA-LANLR---ILRDEGI 345 (456)
T ss_pred C-e--eeeehhhc-cCCccceEEEEcH--------HHHHHHhcCCCCcccCCCCCcCHHHHHHH-HHHHH---HHHhCCH
Confidence 2 3 35799965 46 4899998853 56666631 1 223566778877777 44442 1112 4
Q ss_pred HHHH-HHHHHHHHHhhcC
Q 019298 308 GNFL-ENFAGSCVPSYKL 324 (343)
Q Consensus 308 ~~~~-~~~~~~~~~~L~~ 324 (343)
.++. +++-+.+.+.|++
T Consensus 346 ~~~~~~~~g~~l~~~l~~ 363 (456)
T PRK07480 346 VERVRDDTGPYLQKRLRE 363 (456)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 4445 3444555454443
No 347
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.31 E-value=2.8e-10 Score=106.47 Aligned_cols=206 Identities=17% Similarity=0.150 Sum_probs=119.6
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+++.+||+..|.-.. .++ .+|.+.++++++++.... +.. .....++-+.+++.+ + ..+.++++++++
T Consensus 46 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~q~~~~~~--~~~~~~~~~~la~~l~~~~------p-~~~~v~f~~sGs 114 (431)
T PRK06209 46 DGNEYIEYGMGLRAV--GLGHAYPPVVEAVREALQDGCN--FTRPSAIELDAAESFLELI------D-GADMVKFCKNGS 114 (431)
T ss_pred CCCEEEEccccccch--hcCCCCHHHHHHHHHHHHhCcC--CCCCCHHHHHHHHHHHHhC------C-ccceEEEecCHH
Confidence 388999998886332 233 789999999999886432 322 111113445555443 1 136899999999
Q ss_pred HHHHHHHHHhcC-CC-CeEEEe-CCCCcchHHHH-----HhcCce--eEEeecCCCCCCCCCHHHHHhhhcC--CceEEE
Q 019298 111 QAIDVAMALLSR-PG-ANILLP-RPGFPIYELSA-----AFRHIE--VRHFDLLPDKGWEVDLDDIESLADQ--NTVALV 178 (343)
Q Consensus 111 ~al~~~~~~l~~-~g-d~vl~~-~p~~~~~~~~~-----~~~g~~--~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~ 178 (343)
+|++.+++.... .| .+|+.. .-+|.++.... ...+.. .......... -|++.+++.+.. +..+.+
T Consensus 115 eA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~d~~~l~~~l~~~~~~~aav 191 (431)
T PRK06209 115 DATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRY---NDIASLEALFEDHPGRIACV 191 (431)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCC---CCHHHHHHHHHhCCCCEEEE
Confidence 999999986531 23 345544 22332211000 000100 0000000001 268888887753 234455
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE
Q 019298 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258 (343)
Q Consensus 179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~ 258 (343)
+..|- .|...+.+.+++|.++|++||+++|+||++.++......... .++-.+. +.+++|.++ .|+.+|.++
T Consensus 192 i~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~--~~gv~PD---i~t~gK~lg-gG~p~~av~ 263 (431)
T PRK06209 192 ILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQK--LYGIVPD---LSCFGKALG-NGFAVSALA 263 (431)
T ss_pred EEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhH--HhCCCcc---eeeehhhhc-CCcccEEEE
Confidence 55553 233667889999999999999999999999876433211111 1111112 356899976 468899999
Q ss_pred Ee
Q 019298 259 TT 260 (343)
Q Consensus 259 ~~ 260 (343)
++
T Consensus 264 ~~ 265 (431)
T PRK06209 264 GK 265 (431)
T ss_pred EH
Confidence 85
No 348
>PRK07483 hypothetical protein; Provisional
Probab=99.31 E-value=6.4e-10 Score=104.28 Aligned_cols=268 Identities=14% Similarity=0.128 Sum_probs=153.3
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||..|.-. ..++ .+|.+.+++++++++..... ......+....+++.+.... +-..+++++++++++
T Consensus 28 dG~~ylD~~~g~~~--~~lGh~~p~v~~av~~ql~~~~~~~--~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGsE 101 (443)
T PRK07483 28 TGKRYLDASGGAAV--SCLGHSHPRVIAAIHAQIDRLAYAH--TSFFTTEPAEALADRLVAAA--PAGLEHVYFVSGGSE 101 (443)
T ss_pred CCCEEEEcCccHhh--hccCCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhC--CCCCCEEEEcCCcHH
Confidence 38899999888533 1233 78999999999987542101 10011234445555554322 123469999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhcC-ce------------eEEeecCCC-CCC--CCC-----
Q 019298 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRH-IE------------VRHFDLLPD-KGW--EVD----- 162 (343)
Q Consensus 112 al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~g-~~------------~~~~~~~~~-~~~--~~d----- 162 (343)
+++.+++.... ++ .+|+...-+|++....+.... .. +..++.... ... ..+
T Consensus 102 Ave~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (443)
T PRK07483 102 AVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYG 181 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHH
Confidence 99999887531 23 468888888877644333221 11 111111100 000 000
Q ss_pred ---HHHHHhhhc---CCceEEEEeCC-CC-Cccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 163 ---LDDIESLAD---QNTVALVIINP-GN-PCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 163 ---~~~l~~~~~---~~~~~i~~~~p-~n-ptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
++.+++.+. .+..+.++.-| .. -.|. ..+.+.++++.++|++||+++|.||++.++...+.- .....++-
T Consensus 182 ~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~-~a~~~~gv 260 (443)
T PRK07483 182 QRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTL-FACEEDGV 260 (443)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHH-HHHhhcCC
Confidence 245665453 12334455556 32 3354 467889999999999999999999999988554431 11122222
Q ss_pred CCCEEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhhHHHHH-
Q 019298 234 TVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTIMQIMI- 306 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~~~~l~- 306 (343)
.++++ +++|.+ ..|. .+|.+++++ ++.+.+... ...++..++++.+++ .+.|+ .+.+
T Consensus 261 ~PDiv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa-~a~l~---~i~~~ 324 (443)
T PRK07483 261 APDLV---TIAKGL-GAGYQPIGAVLASD--------RIYDAIADGSGFFQHGHTYLGHATACAAA-LAVQR---VIAED 324 (443)
T ss_pred CCCee---eehhhh-ccCccccEEEEEcH--------HHHHHHhcCCCccccCCCCCCCHHHHHHH-HHHHH---HHHhc
Confidence 22333 459996 4575 899999853 566665421 223556778777666 44432 1112
Q ss_pred -HHHHHHHHHHHHHHhhc
Q 019298 307 -HGNFLENFAGSCVPSYK 323 (343)
Q Consensus 307 -~~~~~~~~~~~~~~~L~ 323 (343)
..++.++.-+.+.+.|+
T Consensus 325 ~l~~~~~~~g~~l~~~L~ 342 (443)
T PRK07483 325 GLLANVRARGEQLRARLR 342 (443)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 45555555555555554
No 349
>PRK06148 hypothetical protein; Provisional
Probab=99.31 E-value=6.4e-10 Score=113.85 Aligned_cols=264 Identities=13% Similarity=0.006 Sum_probs=154.2
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++.++||..|.. .++ .+|++.+++++++.....+ .|. .+.+..+|+.+.... +-..+.+++++++++
T Consensus 623 G~~ylD~~~g~~----~lGH~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~~lAe~L~~~~--p~~~~~v~f~nSGsE 691 (1013)
T PRK06148 623 GRAYLDCFNNVC----HVGHAHPRVVAAAARQAARLNTNTRYL-----HDAIVAYAERLTATL--PDGLTVAFFVNSGSE 691 (1013)
T ss_pred CCEEEEcccChh----hcCCCCHHHHHHHHHHHhhcCCcCCcC-----CHHHHHHHHHHHHhC--CCCcCEEEEeCCcHH
Confidence 888999988752 234 7899999999998753221 222 233444455444322 112368899999999
Q ss_pred HHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecC--CCCCCCC-C-------HHHH
Q 019298 112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HI------------EVRHFDLL--PDKGWEV-D-------LDDI 166 (343)
Q Consensus 112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~--~~~~~~~-d-------~~~l 166 (343)
|++.+++.... ...+|+...-+|++....+... +. .+..++.. ....+.. + .+.+
T Consensus 692 A~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 771 (1013)
T PRK06148 692 ANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESV 771 (1013)
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHH
Confidence 99999987632 2357888888887764332221 10 01111100 0000110 1 1334
Q ss_pred Hhhhc---C--CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298 167 ESLAD---Q--NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (343)
Q Consensus 167 ~~~~~---~--~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 239 (343)
++.+. . +..+.+|.-| ..-.|. ..+.+.++++.++|++||+++|.||++.+|...+........++-.+. |
T Consensus 772 ~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PD-i- 849 (1013)
T PRK06148 772 AEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPD-I- 849 (1013)
T ss_pred HHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcc-e-
Confidence 44442 1 2344455555 444455 467899999999999999999999999988554432222222222222 3
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFA 315 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~ 315 (343)
.+++|.+| .|+.+|.++++ +++.+.+... ...+++.++++.+++ .+.|+ .+.+ ..++.+++-
T Consensus 850 -vt~gK~lg-gG~Plgav~~~--------~ei~~~~~~g~~~~~Tf~gnpla~aaa-~a~L~---~i~~e~l~~~~~~~G 915 (1013)
T PRK06148 850 -VTMGKPIG-NGHPMGAVVTT--------REIADSFDNGMEYFNTFGGNPVSCAIG-LAVLD---IIEDEDLQRNALEIG 915 (1013)
T ss_pred -eeeccccc-CCcceEEEEEc--------HHHHhhccCCCccccCCCCCHHHHHHH-HHHHH---HHhhccHHHHHHHHH
Confidence 34699965 68999999985 3666665432 223556778877776 34332 1212 555666666
Q ss_pred HHHHHhhcC
Q 019298 316 GSCVPSYKL 324 (343)
Q Consensus 316 ~~~~~~L~~ 324 (343)
+.+.+.|++
T Consensus 916 ~~l~~~L~~ 924 (1013)
T PRK06148 916 NYLLAGLRE 924 (1013)
T ss_pred HHHHHHHHH
Confidence 666666554
No 350
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.30 E-value=2.5e-09 Score=100.86 Aligned_cols=248 Identities=14% Similarity=0.061 Sum_probs=146.1
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC---CCCCcEEEecC
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK---LTPNDVFVTSG 108 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~---~~~~~i~~~~g 108 (343)
++++++|+..|.-.. .++ .+|.+.+++++++..-.. .. ...-..+.+..+++.+....... -..+.++++++
T Consensus 62 dG~~ylD~~~g~~~~--~lGh~~p~i~~Ai~~q~~~l~~-~~-~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~s 137 (472)
T PRK08742 62 DGRRYLDAVSSWWTN--LFGHAEPRIGAAIAAQAGELEQ-VM-LAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADN 137 (472)
T ss_pred CCCEEEEcCccHHhc--cCCCCCHHHHHHHHHHHHhCCC-cc-ccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCC
Confidence 388899998885331 233 689999999998864211 00 00111233455555554322110 12369999999
Q ss_pred hHHHHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCC--CCCC----
Q 019298 109 CTQAIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDK--GWEV---- 161 (343)
Q Consensus 109 ~~~al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~---- 161 (343)
+++|++.+++.... + ..+|+...-+|++....+...+.. +..++..... .++.
T Consensus 138 GSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~ 217 (472)
T PRK08742 138 GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAED 217 (472)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHH
Confidence 99999999987631 2 267888888888765444333211 1111111000 0011
Q ss_pred ----CHHHHHhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 162 ----DLDDIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 162 ----d~~~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
+++.+++.+.. +..+.++.-| .+-.|.. .+++.++++.++|++||+++|.||++.+|...+.- .....++
T Consensus 218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~-~a~e~~g 296 (472)
T PRK08742 218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTL-FACEQAG 296 (472)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc-hHHHhcC
Confidence 24566666642 3344455566 5666764 67899999999999999999999999988655532 1222222
Q ss_pred CCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh-------hhccccCcchHHHHHHHhccc
Q 019298 233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-------YFDILGDPATFIQVCIMYGCL 298 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~a~~~~~l 298 (343)
-.+.++ +++|.++ .| +.+|.+++++ ++.+.+.. ....+++.++++.+++ .+.|
T Consensus 297 v~PDiv---~~gKgl~-gG~~Plaav~~~~--------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa-~a~L 357 (472)
T PRK08742 297 VMPDLL---CLSKGLT-GGFLPLSAVLATQ--------QLYDAFLDDSRERAFLHSHSYTGNPLACAAA-LATL 357 (472)
T ss_pred CCCCEE---EEccccc-CCCCCcceeeccH--------HHHHHhhccCccCccCcCCCCCccHHHHHHH-HHHH
Confidence 222333 3599964 56 4899998853 56665532 1223456677776666 4443
No 351
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.27 E-value=2.9e-09 Score=100.35 Aligned_cols=268 Identities=16% Similarity=0.096 Sum_probs=150.8
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEe-cChH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVT-SGCT 110 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~-~g~~ 110 (343)
++.++|+..|.-.. .++ .+|.+.+++++++.+....... ....+.+..+++.+......... .+.++++ ++++
T Consensus 62 G~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGS 137 (464)
T PRK06938 62 GRQFIDCLAGAGTL--ALGHNHPVVIEAIQQVLADELPLHTL--DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGT 137 (464)
T ss_pred CCEEEEccCCcccc--ccCCCCHHHHHHHHHHHHhhhccccc--ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcH
Confidence 88899998886332 233 7899999999998643211110 11123344444444331111111 1356565 6889
Q ss_pred HHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecCCCCC--CC--------CCHHH
Q 019298 111 QAIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKG--WE--------VDLDD 165 (343)
Q Consensus 111 ~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~--~~--------~d~~~ 165 (343)
+|.+.+++.... ...+|+...-+|++....+... +. ++..++...... ++ .+++.
T Consensus 138 EAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 217 (464)
T PRK06938 138 DAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHY 217 (464)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHH
Confidence 999999987531 2367888888887765443332 10 112222111000 00 12566
Q ss_pred HHhhhcC-----CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEE
Q 019298 166 IESLADQ-----NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238 (343)
Q Consensus 166 l~~~~~~-----~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i 238 (343)
+++.+.+ +..+.++.-| ..-.|.+ .+.+.++++.++|++||+++|.||++.+|...+.- .....++-.++++
T Consensus 218 l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~-~a~e~~gv~PDiv 296 (464)
T PRK06938 218 LENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKM-FAFEHAGIIPDVV 296 (464)
T ss_pred HHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHH-HHHHhcCCCCCEE
Confidence 7777653 1345556666 4445665 56899999999999999999999999988554431 1112222222333
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFA 315 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~ 315 (343)
+++|.++ .|+.+|.+++.+ ++ +.+... ...+++.++++.+++ .+.|+ .+.+ ..++.++.-
T Consensus 297 ---~~gKglg-gG~PlsAv~~~~--------~~-~~~~~~~~~~T~~gnpla~Aaa-~a~L~---~l~~~~l~~~~~~~G 359 (464)
T PRK06938 297 ---VLSKAIG-GSLPLAVVVYRE--------WL-DTWQPGAHAGTFRGNQMAMAAG-SATLR---YIKEHRLAEHAAAMG 359 (464)
T ss_pred ---Eeecccc-CCCceEEEeehh--------Hh-hccCCCCCCCCCCcCHHHHHHH-HHHHH---HHHHhHHHHHHHHHH
Confidence 3599975 579999999853 22 333211 223556677777666 44432 1111 444555555
Q ss_pred HHHHHhhc
Q 019298 316 GSCVPSYK 323 (343)
Q Consensus 316 ~~~~~~L~ 323 (343)
+.+.+.|+
T Consensus 360 ~~l~~~L~ 367 (464)
T PRK06938 360 ERLREHLR 367 (464)
T ss_pred HHHHHHHH
Confidence 55555444
No 352
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.18 E-value=2.5e-09 Score=97.70 Aligned_cols=268 Identities=19% Similarity=0.152 Sum_probs=163.2
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC---CCCCCCCCHHHHHHHHHHHhhhCCCC-CCCCcEEEecC
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN---GYAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSG 108 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~~i~~~~g 108 (343)
++++++|=..|.=.. +.--..+++.++++++++.-... .....+ ..+|-+.+++.. + -+-++|++++|
T Consensus 42 ~G~r~lDg~sg~W~~-~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~a------P~~~l~~vFf~~s 113 (449)
T COG0161 42 DGRRYLDGMSGLWCV-NHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELA------PEGGLDHVFFTDS 113 (449)
T ss_pred CCCEEEecccHHHHh-hcCcCCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhC------CCCCccEEEEeCC
Confidence 377888876665221 11236899999999999864211 111111 345556666655 2 23679999999
Q ss_pred hHHHHHHHHHHhc-------CCC-CeEEEeCCCCcchHHHHHhcCc--------------eeEEeecCC---C---CCCC
Q 019298 109 CTQAIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLP---D---KGWE 160 (343)
Q Consensus 109 ~~~al~~~~~~l~-------~~g-d~vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~---~---~~~~ 160 (343)
+|++++.+++... +|. .+++.-..+|.+-...+...|. .+..++... . +.+.
T Consensus 114 GSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~ 193 (449)
T COG0161 114 GSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGD 193 (449)
T ss_pred chHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCCh
Confidence 9999999998863 232 3488888888654333222221 111111111 0 1111
Q ss_pred ----CCHHHHHhhhcC---CceEEEEeCC--CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc
Q 019298 161 ----VDLDDIESLADQ---NTVALVIINP--GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV 230 (343)
Q Consensus 161 ----~d~~~l~~~~~~---~~~~i~~~~p--~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~ 230 (343)
-..++|++.+.. .+.+.++.-| ..-+|..+ ++..|+++.++|++||+++|.||+-.+|...|+-+.. ..
T Consensus 194 ~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~-e~ 272 (449)
T COG0161 194 EEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFAC-EH 272 (449)
T ss_pred HHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhh-hh
Confidence 125566666643 5566677777 45588875 5578999999999999999999999998877653221 11
Q ss_pred cCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh------hccccCcchHHHHHHHhccchhhHHH
Q 019298 231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQVCIMYGCLSTIMQI 304 (343)
Q Consensus 231 ~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~~l~~~~~~ 304 (343)
++-.+.++ +++|..+..=+.+|.+++++ ++.+.+..- ...+++.+|++-+++ .+-| .-+
T Consensus 273 ~gi~PDi~---~~aKGLT~GY~Pl~a~l~~~--------~I~~~~~~~~~~~f~HG~TYsghPlacAaA-la~L---~i~ 337 (449)
T COG0161 273 AGIVPDIL---CLAKGLTGGYLPLSAVLTSD--------RIYEAFSDGDAGAFMHGHTYSGNPLACAAA-LANL---DIL 337 (449)
T ss_pred cCCCCCee---eecccccccchhhHhHhhhH--------HHHHHHhcccCCeeccCCccccCHHHHHHH-HHHH---HHH
Confidence 22222233 46899665557788777753 566666543 234566777766666 2221 223
Q ss_pred HH--HHHHHHHHHHHHHHhhcC
Q 019298 305 MI--HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 305 l~--~~~~~~~~~~~~~~~L~~ 324 (343)
.+ +.++.++.-..+.+.|..
T Consensus 338 e~e~l~~~~~~~~~~l~~~L~~ 359 (449)
T COG0161 338 EEEDLLERVAEIGAYLQAGLQA 359 (449)
T ss_pred HhcCHHHHHHHHHHHHHHHHHH
Confidence 32 777777777777777775
No 353
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.18 E-value=3.4e-09 Score=98.82 Aligned_cols=165 Identities=15% Similarity=0.106 Sum_probs=121.8
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 157 (343)
..+..+.+|+.+ ..+ ..++++|+|.++..++.+++.+||+|+++++||-+........|+..+++......
T Consensus 72 i~eAqe~aA~~f--------gAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np 143 (557)
T COG1982 72 IKEAQELAARVF--------GADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP 143 (557)
T ss_pred HHHHHHHHHHHh--------CCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence 356777777777 345 66789999999999999999999999999999999888889999998888654433
Q ss_pred ----CCCCCHHHHHhhhcC--Cc-eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc
Q 019298 158 ----GWEVDLDDIESLADQ--NT-VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV 230 (343)
Q Consensus 158 ----~~~~d~~~l~~~~~~--~~-~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~ 230 (343)
-.+++.+.+++++.+ .. +++++.+|.. .|.+++ ++++.+++...++++.+|+++....-.....+. +
T Consensus 144 ~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~--~ 217 (557)
T COG1982 144 LYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPE--S 217 (557)
T ss_pred cccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccCcc--h
Confidence 145789999887644 33 6677777754 677755 466677777999999999999864322111111 2
Q ss_pred cCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 231 FGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 231 ~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
....+.++++.|.+|. ++++..+.++-
T Consensus 218 ~~~~~~~~~tqS~HK~--l~alSQaS~iH 244 (557)
T COG1982 218 ALNGGADFVTQSTHKL--LAALSQASMIH 244 (557)
T ss_pred hhhcCceEEEechhhh--hhhhhhhHHHh
Confidence 2224578999999999 56666665443
No 354
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.17 E-value=9.5e-09 Score=103.71 Aligned_cols=191 Identities=18% Similarity=0.148 Sum_probs=124.9
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCC------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC-hHHHHHH---HHHHh-
Q 019298 52 HTTHVATEAVAEALLSEKFNGYAPT------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG-CTQAIDV---AMALL- 120 (343)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~Y~~~------~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g-~~~al~~---~~~~l- 120 (343)
..++.+.+.+.. ...+..|.|. +|..++...+.+++.+..|. +++.+.++ ++.+... +++.+
T Consensus 510 ~~~p~~~~~~~~---~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~----d~~sl~~~~ga~ge~agL~a~r~~~ 582 (954)
T PRK05367 510 KLNAAAEMIPIT---WPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGY----DAVSLQPNAGAQGEYAGLLAIRAYH 582 (954)
T ss_pred cCCHHHHHHHHh---CccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCC----CCEEECccHHHHHHHHHHHHHHHHh
Confidence 344555444333 2233445553 24556777777777665553 45666554 4444423 33332
Q ss_pred cCCCC----eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHH
Q 019298 121 SRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 121 ~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~ 193 (343)
.++|+ +|++++..|++....+...|.+++.++.+. +..+|+++|++.+.+ ++.+|++.+|++-.+.. +
T Consensus 583 ~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~--~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e---~ 657 (954)
T PRK05367 583 ESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDE--NGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFE---E 657 (954)
T ss_pred hccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCC--CCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeec---C
Confidence 24554 699999999888888999999999998763 357999999998865 35667777887664444 4
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC----CCCCcEEEEEEe
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI----VPGWRLGWFVTT 260 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~----~~G~r~G~i~~~ 260 (343)
++++|+++|+++|+++++|.++......-. ....+ +-.++..|++|+|+ ..|..+|.+.+.
T Consensus 658 ~I~eI~~i~h~~G~~v~VDgA~~~al~~l~---~pg~~---GADi~~~s~HK~f~~P~G~GGPg~G~l~vr 722 (954)
T PRK05367 658 TIREICEIVHEHGGQVYLDGANMNAQVGLA---RPGDI---GADVSHLNLHKTFCIPHGGGGPGVGPIGVK 722 (954)
T ss_pred CHHHHHHHHHHcCCEEEEECcChhhccCCC---Chhhc---CCCEEEecCcccCCCCcCCCCCceEEEeec
Confidence 689999999999999999999964221111 11122 23388999999975 344558888774
No 355
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.17 E-value=2.4e-09 Score=106.41 Aligned_cols=170 Identities=16% Similarity=0.158 Sum_probs=118.2
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH---HHHHhc-----CCCCeEEEeCCCCcchHHHHHhcCcee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV---AMALLS-----RPGANILLPRPGFPIYELSAAFRHIEV 148 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~---~~~~l~-----~~gd~vl~~~p~~~~~~~~~~~~g~~~ 148 (343)
+|..++...+.+|+.+..|.+ .-.+...+|+ .+-.. +++... ...++|+++.-.|+.....+...|+++
T Consensus 526 qG~lq~i~elq~~l~eltGmd--~~Sl~p~aGA-~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~V 602 (939)
T TIGR00461 526 EGYQELIAQLEKWLCSITGFD--AISLQPNSGA-QGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQV 602 (939)
T ss_pred HHHHHHHHHHHHHHHHHHCCC--CcccCCchHH-HHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEE
Confidence 345566666777776655543 2233333443 33332 223211 123689999999988888899999999
Q ss_pred EEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHH-HHHHHHHHhhcCcEEEEccCCCccccCCCC
Q 019298 149 RHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKP 224 (343)
Q Consensus 149 ~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~ 224 (343)
+.++.+ .++.+|+++|++.+++ ++.+|++.+|+| +|.. ++ +++|+++|+++|.++++|.++..-...
T Consensus 603 v~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~---e~~I~eI~~iah~~G~~v~VDgAq~~al~~--- 673 (939)
T TIGR00461 603 VPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVF---EPTIQHACDIVHSFGGQVYLDGANMNAQVG--- 673 (939)
T ss_pred EEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Ccee---cccHHHHHHHHHHcCCEEEEEecChhhCCC---
Confidence 999875 3457999999999973 788899999999 7888 55 999999999999999999998541111
Q ss_pred CCcccccCCCCCEEEEccCccccC----CCCCcEEEEEEeC
Q 019298 225 FVPMGVFGSTVPILTLGSLSKRWI----VPGWRLGWFVTTD 261 (343)
Q Consensus 225 ~~~~~~~~~~~~~i~~~S~sK~~~----~~G~r~G~i~~~~ 261 (343)
..... ..+-.++++|.+|+|+ ..|..+|.+.+..
T Consensus 674 l~~Pg---~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~ 711 (939)
T TIGR00461 674 LTSPG---DLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKS 711 (939)
T ss_pred CCCcc---ccCCCEEEecCCccCCCCCCCCCCCeEEEEEhh
Confidence 11112 2233499999999776 3566789988863
No 356
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.17 E-value=3.1e-08 Score=93.34 Aligned_cols=268 Identities=15% Similarity=0.076 Sum_probs=148.3
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~ 111 (343)
++.++||..|.-.. .++ .+|++.+++++++......... ....+.+..+|+.+.......... ..+++++++++
T Consensus 57 G~~ylD~~~g~~~~--~lGH~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsE 132 (459)
T PRK06931 57 GNQYLDCLAGAGTL--ALGHNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGAD 132 (459)
T ss_pred CCEEEEcccchhhc--cCCCCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHH
Confidence 88899998886332 233 7889999999998753211110 112345555666664422111011 23455688899
Q ss_pred HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCC--CC----CCHHHH----
Q 019298 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKG--WE----VDLDDI---- 166 (343)
Q Consensus 112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~----~d~~~l---- 166 (343)
|.+.+++... ....+|+...-+|++....+..... .+..++...... +. -+.+.+
T Consensus 133 Ave~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (459)
T PRK06931 133 AVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYF 212 (459)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHH
Confidence 9999988753 2336788888889877655543211 112222110000 00 012222
Q ss_pred HhhhcC-----CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298 167 ESLADQ-----NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (343)
Q Consensus 167 ~~~~~~-----~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 239 (343)
++.+.. +..+.++.-| ..-.|.. .+.+.++++.++|++||+++|.||+..+|...+.. .....++-.+.++
T Consensus 213 ~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~-~a~~~~gv~PDiv- 290 (459)
T PRK06931 213 ENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKM-FAFEHAGIEPDII- 290 (459)
T ss_pred HHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchH-HHhhhcCCCCCEE-
Confidence 222221 2234455556 4445665 57899999999999999999999999988544431 1222222222333
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAG 316 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~ 316 (343)
+++|.++ .|+.+|.+++++ + ++.+... ...+++.++++.+++ .+.|+ .+.+ ..++.++.-+
T Consensus 291 --t~gK~l~-gG~Pi~av~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa-la~L~---~l~~~~l~~~~~~~G~ 354 (459)
T PRK06931 291 --VMSKAVG-GGLPLAVLGIKK--------E-FDAWQPGGHTGTFRGNQLAMATG-LTTLK---ILKEENLAQNAAERGE 354 (459)
T ss_pred --Eeccccc-CCcceeeeeeHH--------H-HhhccCCCCCCCCCCCHHHHHHH-HHHHH---HHHhCCHHHHHHHHHH
Confidence 4599965 579999877642 2 2333222 223556778776666 34332 1112 4445555555
Q ss_pred HHHHhhc
Q 019298 317 SCVPSYK 323 (343)
Q Consensus 317 ~~~~~L~ 323 (343)
++.+.|+
T Consensus 355 ~l~~~L~ 361 (459)
T PRK06931 355 WLKAQLA 361 (459)
T ss_pred HHHHHHH
Confidence 5544444
No 357
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.17 E-value=2.3e-09 Score=94.14 Aligned_cols=266 Identities=18% Similarity=0.141 Sum_probs=165.1
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
++++++|+..|..... .-..+|.+.+++.+++.. +.+..|... -..++-+++++.+ +-+-..++++++++
T Consensus 48 ~G~ryLD~f~Gi~tvs-lGHchP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~------P~~l~~vfF~nsGs 119 (442)
T KOG1404|consen 48 EGRRYLDAFGGIVTVS-LGHCHPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKL------PGDLKVVFFVNSGS 119 (442)
T ss_pred CCceeehhhCCeEEEE-cCCCChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhC------CCCceEEEEecCCc
Confidence 3788889888875432 134789999999988843 244566653 3578888888888 44556789999999
Q ss_pred HHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHH-hcCceeEEeecC-----------C--CCC-CCCC---------HH
Q 019298 111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAA-FRHIEVRHFDLL-----------P--DKG-WEVD---------LD 164 (343)
Q Consensus 111 ~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~-----------~--~~~-~~~d---------~~ 164 (343)
+|.+++++... ...-.++--..+|.+...... ..+......+.. | ..+ |+=+ .+
T Consensus 120 EANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~ 199 (442)
T KOG1404|consen 120 EANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAK 199 (442)
T ss_pred hHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHH
Confidence 99999987753 122356666677765443322 222221111110 0 000 0000 13
Q ss_pred HHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298 165 DIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (343)
Q Consensus 165 ~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 239 (343)
+++..+. ..+.+.++.-+ ..-.|.+ +++-.+++..++|+++|.++|.||+..+|...| . +..++..+-+--
T Consensus 200 ~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~---~wgfe~h~v~PD 275 (442)
T KOG1404|consen 200 ELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-H---MWGFESHGVVPD 275 (442)
T ss_pred HHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-c---cccccccCCCcc
Confidence 3333332 24445555555 6666777 677899999999999999999999999987666 3 333444444445
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-c-cccCcchHHHHHHHhccchhhHHHHH---HHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-D-ILGDPATFIQVCIMYGCLSTIMQIMI---HGNFLENF 314 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~a~~~~~l~~~~~~l~---~~~~~~~~ 314 (343)
|-|++|.. ..|+.+|.++++ +++.+-+.+.. . .++..+|++.++. .+.|. .++ ++++.++.
T Consensus 276 IvTmAKgi-GnG~Pl~AVvtt--------~EIa~v~~~~~~~fnTyggnP~a~avg-~aVL~----Vikee~LqE~aa~v 341 (442)
T KOG1404|consen 276 IVTMAKGI-GNGFPLGAVVTT--------PEIADVLNQKSSHFNTYGGNPVACAVG-LAVLK----VIKEENLQENAAEV 341 (442)
T ss_pred HHHHHhhc-cCCCcceeeecC--------HHHHHHHHhccccccccCCCchhHHHH-HHHHH----HHHHHhHHHHHHHH
Confidence 66899994 577999999985 47777776554 2 2556777777776 33321 221 44444455
Q ss_pred HHHHHHhhcC
Q 019298 315 AGSCVPSYKL 324 (343)
Q Consensus 315 ~~~~~~~L~~ 324 (343)
-.++.+.|.+
T Consensus 342 G~yl~~~l~~ 351 (442)
T KOG1404|consen 342 GSYLLEKLAA 351 (442)
T ss_pred HHHHHHHHHH
Confidence 5555555554
No 358
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=1.6e-09 Score=95.01 Aligned_cols=266 Identities=15% Similarity=0.098 Sum_probs=168.1
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~ 106 (343)
++.+++||.... +..+...+++++.....++.- .-..|+.-.-+.++.+.||+|++ .+.-++-
T Consensus 92 ~G~~~~N~aS~N---fL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G--------~E~aivY 160 (467)
T KOG1358|consen 92 DGKDVLNFASAN---FLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG--------TEDAIVY 160 (467)
T ss_pred cCceeecccchh---hhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC--------Ccceeee
Confidence 366777777765 344667888888877777641 22356665567789999999994 3444455
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCc------------
Q 019298 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT------------ 174 (343)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------------ 174 (343)
+-+-.++..++.+++++||.+.+.+-.........+.....+.++.. -|.+.+++...+.+
T Consensus 161 s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~ 233 (467)
T KOG1358|consen 161 SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALT 233 (467)
T ss_pred ccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccccccc
Confidence 55567777788999999999999998888888777777777777753 25666765543211
Q ss_pred eE-EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC--CCCCcccccCCCCCEEEEccCccccCCCC
Q 019298 175 VA-LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (343)
Q Consensus 175 ~~-i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~--~~~~~~~~~~~~~~~i~~~S~sK~~~~~G 251 (343)
+. +++..-.-+||.+.+ +.+|+++..|+...+|+||.|+..+.+. .........+..+-.++++|+.-+++..|
T Consensus 234 Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G 310 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG 310 (467)
T ss_pred eEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC
Confidence 22 333444678999954 6777888889999999999999876653 33322222333334589999999987777
Q ss_pred CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHhhcCCCCce
Q 019298 252 WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQI-MIHGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~-l~~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
|++++.. .+. ..+++...... +.+.++....++ ..++.- .++ -+..+.++.....+.+.|....++.
T Consensus 311 ---gFc~G~~--~i~----~hQrLSg~~Y~fSAslPp~la~aa-~~ai~i-~~~~p~~~~~L~~k~~~~H~~l~~~s~~~ 379 (467)
T KOG1358|consen 311 ---GFCAGKS--FIA----DHQRLSGSGYCFSASLPPYLAGAA-IKAILI-EEWNPEIVQPLRAKVAKFHAALSSNSGFI 379 (467)
T ss_pred ---ceeecce--eeE----eeeeccccceeeeccCchhhhhhH-HHHHHH-HhhCcchhhhhhccccccchhhhcCCceE
Confidence 8877743 111 22333333222 334455544444 121110 111 1155556666666667777655555
Q ss_pred e
Q 019298 330 N 330 (343)
Q Consensus 330 ~ 330 (343)
+
T Consensus 380 v 380 (467)
T KOG1358|consen 380 V 380 (467)
T ss_pred E
Confidence 4
No 359
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.12 E-value=4.3e-09 Score=96.36 Aligned_cols=241 Identities=13% Similarity=0.047 Sum_probs=139.6
Q ss_pred CCCcHHHHHHHHHHHhcC-CCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEe-cChHHHHHHHHHHhcCCCC
Q 019298 51 FHTTHVATEAVAEALLSE-KFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVT-SGCTQAIDVAMALLSRPGA 125 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~-~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~-~g~~~al~~~~~~l~~~gd 125 (343)
...++++++++....... ..+.+.+ ..-..+.|+.+++++ +.+. .+|+++ .|++.+++.++.++..+ +
T Consensus 12 ~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~ 84 (361)
T TIGR01366 12 SKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELF------SLPDGYEVILGNGGATAFWDAATFGLIEK-K 84 (361)
T ss_pred cCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchhHHHHHHHHhcccc-c
Confidence 457788888876531100 0122222 123456778888887 3333 478886 55999999999998743 3
Q ss_pred eEEEeCCCCc-chHHHHHhc--CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 019298 126 NILLPRPGFP-IYELSAAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202 (343)
Q Consensus 126 ~vl~~~p~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 202 (343)
.+.+..-.|. .+...+... +.++..++... +..++. .+++++++|++++..|.||...+.+++ +
T Consensus 85 ~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~lV~~~h~et~tG~~~pi~~I------~ 151 (361)
T TIGR01366 85 SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPEP-----QADPGVDVIAWAHNETSTGVAVPVRRP------E 151 (361)
T ss_pred ccEEecCHHHHHHHHHHHhhhccCCceEEecCC--CCCCCC-----ccCCCCCEEEEcccCCccceecccccc------c
Confidence 3333333342 233344431 22555555432 222332 345688999999999999999776543 4
Q ss_pred hhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh----
Q 019298 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---- 278 (343)
Q Consensus 203 ~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~---- 278 (343)
+++|+++++|.+.... ..+..+.. -.+++.|..|.++.+| .++.+++++ +++++++..
T Consensus 152 ~~~g~~~iVDavqs~g----~~~idv~~-----~D~~~~s~~K~lg~~~-Gl~~~~~s~--------~~~~~~~~~~~~~ 213 (361)
T TIGR01366 152 GSDDALVVIDATSGAG----GLPVDIAE-----TDVYYFAPQKNFASDG-GLWLAIMSP--------AALERIEAIAASG 213 (361)
T ss_pred ccCCCeEEEEcCcccc----CCCCCHHH-----CCEEEEEchhhcCCCC-ceEEEEECH--------HHHhhhhcccCCC
Confidence 7899999999998862 22223322 2378899999999874 245555543 334333311
Q ss_pred ----------------h-ccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhhcCCCCce
Q 019298 279 ----------------F-DILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 279 ----------------~-~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
. ..+.+.++.....+...+++...+. ++ ..++.++..+.+.+.+.+++++.
T Consensus 214 ~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~ 284 (361)
T TIGR01366 214 RWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYAT 284 (361)
T ss_pred CCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 0 0122333333222223443322211 22 56888888888999998885555
No 360
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.12 E-value=2.3e-08 Score=88.59 Aligned_cols=270 Identities=17% Similarity=0.094 Sum_probs=162.3
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
++.++||+..++-....+ ...|++.+++.+++..- .++.|-... .-++.+.+.+.+.+ -.++.|+++++++
T Consensus 54 ~g~EyiD~~ssw~~~~~G-hanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~-----~~~~rvff~nsGT 126 (433)
T KOG1401|consen 54 DGKEYIDFTSSWAVTILG-HANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK-----GSAERVFFCNSGT 126 (433)
T ss_pred CcceeeeeccceeccccC-CCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC-----CCccEEEEecCCc
Confidence 388999999888543332 35899999998887642 122222211 33444555554432 2788999999999
Q ss_pred HHHHHHHHHhcC------CC--CeEEEeCCCCcchHHHHHh-cCceeEEeec---CCCC--CCCCCHHHHHhhhcCCc--
Q 019298 111 QAIDVAMALLSR------PG--ANILLPRPGFPIYELSAAF-RHIEVRHFDL---LPDK--GWEVDLDDIESLADQNT-- 174 (343)
Q Consensus 111 ~al~~~~~~l~~------~g--d~vl~~~p~~~~~~~~~~~-~g~~~~~~~~---~~~~--~~~~d~~~l~~~~~~~~-- 174 (343)
+|+..+++...+ +- .+++-..-+|++-...+.. .+......+. .++- .--=|..++++.++.+.
T Consensus 127 eAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~ 206 (433)
T KOG1401|consen 127 EANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGE 206 (433)
T ss_pred HHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCc
Confidence 999999987642 11 2488888888653332222 2211111111 1110 00115888888887654
Q ss_pred eEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC-CcccccCCCCCEEEEccCccccCCCC
Q 019298 175 VALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPG 251 (343)
Q Consensus 175 ~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~~~G 251 (343)
.+.++.-| ....|.. .++|.+..|.+.|+++|+++|.||++.+|...+..- ..+....++ |.++.|.+ ..|
T Consensus 207 IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD-----I~t~aK~L-~gG 280 (433)
T KOG1401|consen 207 IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD-----ITTVAKPL-GGG 280 (433)
T ss_pred eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCc-----ceeehhhc-cCC
Confidence 23344455 6777776 677999999999999999999999999976654321 111111121 34578994 577
Q ss_pred CcEEEEEEeCCCCCCCchHHHHHHhhhh----ccccCcchHHHHHHHhccchh--hHHHHH-HHHHHHHHHHHHHHhhcC
Q 019298 252 WRLGWFVTTDPCGMFRKPKVVERMKKYF----DILGDPATFIQVCIMYGCLST--IMQIMI-HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~a~~~~~l~~--~~~~l~-~~~~~~~~~~~~~~~L~~ 324 (343)
+.+|..++.+ ++.+.+.--. ..+++.++++-.++ ...|+. ..++++ +...-+..|+.+.+.+.+
T Consensus 281 lPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~-~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~ 351 (433)
T KOG1401|consen 281 LPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAG-IKVLDELKDPETLKNVSKIGKELRKLLDEYLKK 351 (433)
T ss_pred ceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHH-HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999998854 4666554332 33556677776666 333332 133433 444455556666666554
No 361
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.11 E-value=5.7e-08 Score=93.42 Aligned_cols=159 Identities=14% Similarity=0.161 Sum_probs=113.8
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC----C-----
Q 019298 53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----P----- 123 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~----- 123 (343)
..+.+...+...+-+.+...|...++...+++.+.+++.+..|.+- ..=.+|+|+|.+...++....+ |
T Consensus 95 ~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~ 172 (608)
T TIGR03811 95 LMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKE 172 (608)
T ss_pred CHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhh
Confidence 4555655554444444445565566788999999999999888653 2334788888887765544311 0
Q ss_pred -------------------------------------------C------CeEEEeCCCCcchHHHHHhcCce---eEEe
Q 019298 124 -------------------------------------------G------ANILLPRPGFPIYELSAAFRHIE---VRHF 151 (343)
Q Consensus 124 -------------------------------------------g------d~vl~~~p~~~~~~~~~~~~g~~---~~~~ 151 (343)
| -+++++.-.|.++...+...|+. ++.+
T Consensus 173 ~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~V 252 (608)
T TIGR03811 173 VKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPV 252 (608)
T ss_pred ccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEe
Confidence 0 05788888899999999999995 7788
Q ss_pred ecCCCCCCCCCHHHHHhhhcC----C-ce-EEEEeCCCCCcccccCHHHHHHHHHHH---hhcCc--EEEEccCCCcc
Q 019298 152 DLLPDKGWEVDLDDIESLADQ----N-TV-ALVIINPGNPCGNVYSYQHLQKLAETA---NKLKT--LVIADEVYGHL 218 (343)
Q Consensus 152 ~~~~~~~~~~d~~~l~~~~~~----~-~~-~i~~~~p~nptG~~~~~~~l~~l~~~~---~~~~~--~~i~D~ay~~~ 218 (343)
+++ .++.+|+++|++.+.+ + +. +|+-+-....+|.+ +++++|+++| +++|+ ++.+|.||+++
T Consensus 253 pvD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Gai---Dpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~ 325 (608)
T TIGR03811 253 PVD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAV---DGIDKIVALRNKLMKEGIYFYLHVDAAYGGY 325 (608)
T ss_pred ecC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCccc---CCHHHHHHHHHHHHHcCCceeEeeeccccch
Confidence 775 4578999999988753 2 33 34445667899999 7777777776 77887 69999999985
No 362
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.10 E-value=3.9e-08 Score=92.35 Aligned_cols=209 Identities=14% Similarity=0.188 Sum_probs=116.8
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATE--AVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
+++.++|+..|.-. ..++ .+|.+.+ ++++++..-............+....+++.+.+..+ +-..+.|++++++
T Consensus 43 dG~~ylD~~~g~~~--~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SG 119 (443)
T PRK08297 43 TGRRYLDMFTFFAS--SALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGG 119 (443)
T ss_pred CCCEeeecccCHhh--hcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCch
Confidence 48889999877533 1233 7788888 888888642110000000111223334443332111 1134699999999
Q ss_pred HHHHHHHHHHhcC--------C------CCeEEEeCCCCcchHHHHHhcCc-ee-E--EeecC-------CCC-----CC
Q 019298 110 TQAIDVAMALLSR--------P------GANILLPRPGFPIYELSAAFRHI-EV-R--HFDLL-------PDK-----GW 159 (343)
Q Consensus 110 ~~al~~~~~~l~~--------~------gd~vl~~~p~~~~~~~~~~~~g~-~~-~--~~~~~-------~~~-----~~ 159 (343)
++|++.+++.... . ..+|+...-+|++....+..... .. . ..+.. +.. ..
T Consensus 120 sEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (443)
T PRK08297 120 ALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGE 199 (443)
T ss_pred HHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCccc
Confidence 9999999987621 1 25799999899876554443321 10 0 00000 000 00
Q ss_pred C---C------CHHHHHhhhcC--CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC
Q 019298 160 E---V------DLDDIESLADQ--NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV 226 (343)
Q Consensus 160 ~---~------d~~~l~~~~~~--~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~ 226 (343)
. . +++.+++.+.. +..+.++..| ....|.+ .+.+.+++|.++|++||+++|.||++.+|...+...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~- 278 (443)
T PRK08297 200 DLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAW- 278 (443)
T ss_pred ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHH-
Confidence 0 0 23445555532 2334455556 4445654 788999999999999999999999999875544321
Q ss_pred cccccCCCCCEEEEccCccccC
Q 019298 227 PMGVFGSTVPILTLGSLSKRWI 248 (343)
Q Consensus 227 ~~~~~~~~~~~i~~~S~sK~~~ 248 (343)
....++-.+. |+ +++|.+.
T Consensus 279 a~~~~gv~PD-iv--~~gK~l~ 297 (443)
T PRK08297 279 AYQQLGVRPD-IV--AFGKKTQ 297 (443)
T ss_pred HHHhcCCCCC-EE--Eeccccc
Confidence 1111222222 33 4799963
No 363
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.05 E-value=2.1e-07 Score=87.19 Aligned_cols=186 Identities=12% Similarity=0.112 Sum_probs=108.3
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHH--HHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVAT--EAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 108 (343)
++++++|+..|.-.. .++ .+|.+. +++++++.+........ ....+.+ ..+++.+.+... +-..+.++++++
T Consensus 36 dG~~ylD~~~g~~~~--~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~-~~~~~~v~f~~s 111 (431)
T TIGR03251 36 DGRRYLDMFSFFASM--ALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAM-ARFVDTFARVLG-DPALPHLFFIEG 111 (431)
T ss_pred CCCChhhcccChhhc--CCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHH-HHHHHHHHHhcC-CCCcCEEEEeCC
Confidence 388999998886432 233 678888 88888876532100011 1122223 333333322111 113468999999
Q ss_pred hHHHHHHHHHHhcC--------C------CCeEEEeCCCCcchHHHHHhc-Cce-eE--Eeec-------CC-------C
Q 019298 109 CTQAIDVAMALLSR--------P------GANILLPRPGFPIYELSAAFR-HIE-VR--HFDL-------LP-------D 156 (343)
Q Consensus 109 ~~~al~~~~~~l~~--------~------gd~vl~~~p~~~~~~~~~~~~-g~~-~~--~~~~-------~~-------~ 156 (343)
+++|++.+++.... . +.+|+...-+|++....+... |.. .. ..+. .+ .
T Consensus 112 GsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 191 (431)
T TIGR03251 112 GALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDA 191 (431)
T ss_pred cHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccc
Confidence 99999999887631 1 367998998887765444332 211 00 0110 00 0
Q ss_pred CCCC-------CCHHHHHhhhc---CCceEEEEeCCCCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCC
Q 019298 157 KGWE-------VDLDDIESLAD---QNTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGD 222 (343)
Q Consensus 157 ~~~~-------~d~~~l~~~~~---~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~ 222 (343)
.... -+++++++.+. +++.++++.-.....|.. .+.+.+++|.++|++||+++|+||++.++...+
T Consensus 192 ~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG 268 (431)
T TIGR03251 192 PNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTG 268 (431)
T ss_pred cccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccc
Confidence 0000 12344455553 234444444335666765 678999999999999999999999999876554
No 364
>PLN02452 phosphoserine transaminase
Probab=99.05 E-value=4.6e-08 Score=89.15 Aligned_cols=257 Identities=10% Similarity=0.010 Sum_probs=149.0
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV 105 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~ 105 (343)
..++++|+-|= ...++.+++++.+.+-+- ..+...+ ...++-+.+.+.+++.++.+-+.+-+++
T Consensus 5 ~~~~~~f~pGP------~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~--~f~~i~~~~~~~L~~l~~~p~~y~v~~l 76 (365)
T PLN02452 5 QGRVFNFSAGP------ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGK--EFLSIIQKAEADLRELLDIPDNYEVLFL 76 (365)
T ss_pred CCceEeeeCCC------CCCCHHHHHHHHHHHhcccccCccccccCCCch--HHHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence 34467777663 457899999888765321 1112222 1233444444444444443223234566
Q ss_pred ecChHHHHHHHHHHhcCCCCeEEEeCCCCcc--hHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINP 182 (343)
Q Consensus 106 ~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~i~~~~p 182 (343)
..|++.+++.+...|+.+|+++++..-+..+ +...++.+|...+....... ....+++++++. +++.+.+.+++.
T Consensus 77 ~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~hn 154 (365)
T PLN02452 77 QGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TPDAKFVHICAN 154 (365)
T ss_pred eCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CCCCcEEEECCC
Confidence 6888999999999999999998887766644 23455666653333321111 112356666532 335677777777
Q ss_pred CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~ 262 (343)
...||+.++ ++.++. ++++|+|.+..... .+..+..++ +...|..|.+|.+| +|.++++.
T Consensus 155 ETstGv~~~--~~~~i~------~~~lvVDa~Ss~g~----~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr~- 214 (365)
T PLN02452 155 ETIHGVEFK--DYPDVG------NVPLVADMSSNFLS----KPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIRK- 214 (365)
T ss_pred CCCCcEecC--cccccC------CCeEEEECCccccC----cccCHHHcC-----EEEEecccccCCCC--eEEEEEcH-
Confidence 789999643 244432 37999999987632 222332222 34469999999888 68887754
Q ss_pred CCCCCchHHHHHHhhh-------------hccccCcchHHHHHHHhccchhhHH--HHH-HHHHHHHHHHHHHHhhcCCC
Q 019298 263 CGMFRKPKVVERMKKY-------------FDILGDPATFIQVCIMYGCLSTIMQ--IMI-HGNFLENFAGSCVPSYKLIP 326 (343)
Q Consensus 263 ~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~~~a~~~~~l~~~~~--~l~-~~~~~~~~~~~~~~~L~~~~ 326 (343)
++++++... .+....++.....++ ..+|+...+ -++ ..++.+++.+.+.+.|.+.+
T Consensus 215 -------~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l-~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~ 286 (365)
T PLN02452 215 -------DLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMC-GLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESN 286 (365)
T ss_pred -------HHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 333332211 111123333433443 444443221 122 88888999999999999876
Q ss_pred Cc
Q 019298 327 EL 328 (343)
Q Consensus 327 g~ 328 (343)
|+
T Consensus 287 G~ 288 (365)
T PLN02452 287 GF 288 (365)
T ss_pred Cc
Confidence 76
No 365
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.04 E-value=4.7e-08 Score=87.42 Aligned_cols=240 Identities=17% Similarity=0.048 Sum_probs=155.8
Q ss_pred cceeEeccCCCCCCC-CCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH-HHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 35 KKVISLAMGDPTVHS-CFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR-RAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr-~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
.++||.+...-.... .-...+++.+++...++...-..|.-..|...-| ..+++.+. + ....+.++++++.+.+
T Consensus 20 ~~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~---~-~~~aea~~ivnnn~aA 95 (395)
T COG1921 20 RRVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLC---G-LTGAEAAAIVNNNAAA 95 (395)
T ss_pred hhhhhhhhhheeccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHh---c-ccchhheeeECCcHHH
Confidence 455666542211111 1346788899999888765222444433332222 23444442 2 2356888999999999
Q ss_pred HHHHHHHhcCCCCeEE-----EeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcc
Q 019298 113 IDVAMALLSRPGANIL-----LPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl-----~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG 187 (343)
+..++.++.+++..|+ ++ +..+...+.++..|.+++.+... ......+++.++++++.+++-..-+|- |
T Consensus 96 Vll~~~al~~~~EvVis~g~lV~-gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne~ta~llkV~s~~~-~ 169 (395)
T COG1921 96 VLLTLNALAEGKEVVVSRGELVE-GGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINENTALLLKVHSSNY-G 169 (395)
T ss_pred HHHHHhhhccCCeEEEEcccccc-CCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhccCCeeEEEEeeccc-c
Confidence 9999988876544443 23 57788899999999999988643 235688999999999988875555443 3
Q ss_pred cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC
Q 019298 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267 (343)
Q Consensus 188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~ 267 (343)
+.-. =..++++++|+++|+++++|.+-+..+..... .+.+-..+-.++++|-.|.|+ |.+-|.+++.
T Consensus 170 f~~~-l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~---l~~~la~GaDLV~~SgdKllg--GPqaGii~Gk------- 236 (395)
T COG1921 170 FTGM-LSEEELVEIAHEKGLPVIVDLASGALVDKEPD---LREALALGADLVSFSGDKLLG--GPQAGIIVGK------- 236 (395)
T ss_pred cccc-ccHHHHHHHHHHcCCCEEEecCCccccccccc---hhHHHhcCCCEEEEecchhcC--CCccceEech-------
Confidence 3311 13466788888999999999999876542222 222323334499999999965 5668888884
Q ss_pred chHHHHHHhhhh-ccccCcchHHHHHHHhccch
Q 019298 268 KPKVVERMKKYF-DILGDPATFIQVCIMYGCLS 299 (343)
Q Consensus 268 ~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~ 299 (343)
+++++++++.. .....+.+...+++ .++|.
T Consensus 237 -KelI~~lq~~~l~Ralrv~K~tla~l-~~aLe 267 (395)
T COG1921 237 -KELIEKLQSHPLKRALRVDKETLAAL-EAALE 267 (395)
T ss_pred -HHHHHHHHhhhhhhhhhcCcHhHHHH-HHHHH
Confidence 47998888663 33456666666666 44443
No 366
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.03 E-value=1.8e-08 Score=94.38 Aligned_cols=210 Identities=14% Similarity=0.119 Sum_probs=120.3
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHH-HhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEA-LLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~-~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 108 (343)
+++.++|+..|.-.. .++ .+|.+.++++++ .... ....|.. ....++-+.+.+.+.+.. +-..+.++++++
T Consensus 56 dG~~ylD~~sg~~~~--~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~-~~~~~la~~l~~~l~~~~--p~~~~~v~f~~S 130 (464)
T TIGR00699 56 DGNRLLDLYSQISSI--PIGYNNPALLKAAQSPEMATTLINRPALGN-FPSKDWAKILKEGILKVA--PKGQDQVWTGMS 130 (464)
T ss_pred CCCEEEEccCCHhhh--cCCCCCHHHHHHHHHHHHHHhhcccccCCc-HHHHHHHHHHHHhHHhhC--CCCcCEEEEeCC
Confidence 388899998886442 233 789999999984 2322 1112222 112234444433222111 123368999999
Q ss_pred hHHHHHHHHHHhcC--------------------------C---CCeEEEeCCCCcchHHHHHhc-Cce-----------
Q 019298 109 CTQAIDVAMALLSR--------------------------P---GANILLPRPGFPIYELSAAFR-HIE----------- 147 (343)
Q Consensus 109 ~~~al~~~~~~l~~--------------------------~---gd~vl~~~p~~~~~~~~~~~~-g~~----------- 147 (343)
+++|++.+++.... + ..+|+...-+|++....+... +..
T Consensus 131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~ 210 (464)
T TIGR00699 131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD 210 (464)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 99999999987621 1 126998999997765544332 211
Q ss_pred eEEeecCCC-CCC-----------CCCHHHHHhhhcC--CceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEE
Q 019298 148 VRHFDLLPD-KGW-----------EVDLDDIESLADQ--NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 148 ~~~~~~~~~-~~~-----------~~d~~~l~~~~~~--~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~ 211 (343)
...++.... ..+ .-+++.+++.+.. +..+.++..| ....|... +.+.++++.++|++||+++|+
T Consensus 211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~ 290 (464)
T TIGR00699 211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV 290 (464)
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 011111100 000 0135556666642 2234444555 56668775 788999999999999999999
Q ss_pred ccCCCccccCCCCCCcccccCCC--CCEEEEccCccccCCCC
Q 019298 212 DEVYGHLVFGDKPFVPMGVFGST--VPILTLGSLSKRWIVPG 251 (343)
Q Consensus 212 D~ay~~~~~~~~~~~~~~~~~~~--~~~i~~~S~sK~~~~~G 251 (343)
||++.++...+.. .....++-. +. | .+++|.++..|
T Consensus 291 DEV~tGfGrtG~~-fa~e~~gv~~~PD-i--~t~gK~lg~gG 328 (464)
T TIGR00699 291 DEVQTGVGATGKF-WAHEHWNLDDPPD-M--VTFSKKFQTAG 328 (464)
T ss_pred eeeeeCCCCCcch-hHHHhcCCCCCCC-E--EEehhhhccCC
Confidence 9999887554431 111112111 22 3 45699975555
No 367
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.97 E-value=3.5e-07 Score=91.07 Aligned_cols=243 Identities=19% Similarity=0.118 Sum_probs=143.6
Q ss_pred ceeEeccCCCCCCCCCC--CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChHHH
Q 019298 36 KVISLAMGDPTVHSCFH--TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQA 112 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a 112 (343)
+.+|+..+.-. .+++ .+|++.+++++++..-. .+....-..+....+|+.+.+.. +-+ .++|++++++++|
T Consensus 366 ~ylD~~sg~w~--~~lG~h~~p~I~~Ai~~Qa~rl~--hv~~~~~~hepa~~LAe~L~~~~--~~~~l~rVffs~sGSeA 439 (817)
T PLN02974 366 QQFDACASWWT--QGPDPTLQPELARAVAYAAGRYG--HVMFPENVHEPALRAAELLLGGP--GKGWASRVFFSDNGSTA 439 (817)
T ss_pred eEEEcchhHHH--hCCCcCCCHHHHHHHHHHHhhCC--ccccCccCCHHHHHHHHHHHhcc--CCCCCCEEEECCchHHH
Confidence 67888777533 2233 58999999999987531 11111112344455666554311 111 3689999999999
Q ss_pred HHHHHHHhcC---------------------CCCeEEEeCCCCcchHHHHHhcCce---------------eEEe--ecC
Q 019298 113 IDVAMALLSR---------------------PGANILLPRPGFPIYELSAAFRHIE---------------VRHF--DLL 154 (343)
Q Consensus 113 l~~~~~~l~~---------------------~gd~vl~~~p~~~~~~~~~~~~g~~---------------~~~~--~~~ 154 (343)
++.+++...+ ...+|+...-+|++-...+...+.. ...+ +..
T Consensus 440 vE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~ 519 (817)
T PLN02974 440 IEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTV 519 (817)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcc
Confidence 9999886521 1246888888887644433333210 0001 000
Q ss_pred -----------CCC----------CCC-----CC------------HHHHHhhhc-------CCceEEEEeCC--CCCcc
Q 019298 155 -----------PDK----------GWE-----VD------------LDDIESLAD-------QNTVALVIINP--GNPCG 187 (343)
Q Consensus 155 -----------~~~----------~~~-----~d------------~~~l~~~~~-------~~~~~i~~~~p--~nptG 187 (343)
+.. .|. .+ .+.+++.+. .+..+.++.-| +.-.|
T Consensus 520 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGG 599 (817)
T PLN02974 520 GMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGG 599 (817)
T ss_pred ccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCC
Confidence 000 000 00 144555553 13345566666 57778
Q ss_pred ccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCC
Q 019298 188 NVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGM 265 (343)
Q Consensus 188 ~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~ 265 (343)
..+ +.+.++++.++|++||+++|.||++.+|...|... ....++-.++ |+ +++|.+ ..| +.+|.+++++
T Consensus 600 mi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~f-a~e~~gv~PD-Ii--~~gKgL-tgG~~Plaa~l~~~---- 670 (817)
T PLN02974 600 MLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVES-AWELLGCKPD-IA--CYAKLL-TGGLVPLAATLATE---- 670 (817)
T ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchh-hHHhcCCCCC-EE--eecccc-cCCCCccEEEEEcH----
Confidence 875 67899999999999999999999999987665432 1222222222 33 468995 467 6999999863
Q ss_pred CCchHHHHHHhh------h-hccccCcchHHHHHHHhccc
Q 019298 266 FRKPKVVERMKK------Y-FDILGDPATFIQVCIMYGCL 298 (343)
Q Consensus 266 ~~~~~~~~~l~~------~-~~~~~~~~~~~~~a~~~~~l 298 (343)
++.+.+.. + ...+++.++++.+++ .+.|
T Consensus 671 ----~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaa-la~L 705 (817)
T PLN02974 671 ----EVFEAFRGPSKLDALLHGHSYTAHPMGCAAA-AKAL 705 (817)
T ss_pred ----HHHHhhccccccCCcccCCCCCcCHHHHHHH-HHHH
Confidence 56666631 1 233566777777766 4444
No 368
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.97 E-value=4.3e-08 Score=83.38 Aligned_cols=175 Identities=20% Similarity=0.210 Sum_probs=117.4
Q ss_pred CCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe-CCCCcchHH----------
Q 019298 72 GYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP-RPGFPIYEL---------- 139 (343)
Q Consensus 72 ~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~-~p~~~~~~~---------- 139 (343)
+|+- .-|-..|.+..|+.++. ....-+..+.+ ++.||..++..+++|||+.+.. .--|.....
T Consensus 59 GYGydD~GRdtLe~vyA~vf~a----E~a~VRpq~is-GTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~g 133 (416)
T COG4100 59 GYGYDDLGRDTLERVYAQVFGA----EAALVRPQIIS-GTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQG 133 (416)
T ss_pred CCCccccchhHHHHHHHHHhcc----ccceeeeeeec-chhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcc
Confidence 4442 24666777777777742 11111333444 5899999999999999998754 334444433
Q ss_pred HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC-CCCcccccCHHHHHHHHHHHhhc--CcEEEEccCCC
Q 019298 140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP-GNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYG 216 (343)
Q Consensus 140 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~ 216 (343)
+++..|...+.+++.. +..+|.+.++..+++++++|.+... ....--.++.+++++++++.++. ++++++|.+|+
T Consensus 134 SL~dfgi~Y~~v~Lt~--~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG 211 (416)
T COG4100 134 SLKDFGIKYKAVPLTA--DGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG 211 (416)
T ss_pred cHHHhCcceeeccccc--CCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch
Confidence 3455566777777764 4569999999999999999988654 33333346679999999999875 79999999999
Q ss_pred ccccCCCCCCcccccCCCCCEEEEccCccccCCCCC-cEEEEEEe
Q 019298 217 HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW-RLGWFVTT 260 (343)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~i~~~ 260 (343)
+|+-.-++.. + +..++.+|+-|+=|..=. .-||+.+.
T Consensus 212 EFvE~~EPt~-v------GaDliAGSLIKNpGGgiaktGGYiaGk 249 (416)
T COG4100 212 EFVEEKEPTH-V------GADLIAGSLIKNPGGGIAKTGGYIAGK 249 (416)
T ss_pred hhhhccCccc-c------chhhhccceeeCCCCceeeccceeech
Confidence 9885433221 1 123888999999443212 23667663
No 369
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=98.96 E-value=9.8e-08 Score=87.12 Aligned_cols=238 Identities=13% Similarity=-0.016 Sum_probs=138.9
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEeCCCCc
Q 019298 57 ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFP 135 (343)
Q Consensus 57 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~vl~~~p~~~ 135 (343)
+.+++++.+-. .+.+.+ ...++-+.+.+.+++.++.+-+.+-++++.|++.+++.++.+++ ++|++|++.. .|+
T Consensus 19 ~~~~~~~~~~~--~~HRs~--~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG 93 (374)
T TIGR01365 19 SIEELKNAPLG--RSHRSK--LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG 93 (374)
T ss_pred hHHHHhhhhcc--cCcCCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH
Confidence 55566554322 122322 23444444445555445532222335678889999999999998 5888998865 554
Q ss_pred ch-H-HHHHhcCc-eeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 136 IY-E-LSAAFRHI-EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 136 ~~-~-~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
.- . ..++..|+ ++..+.. +.+..+++++++. . +.+++++.-..||+..+. ++++..+ ++.++|+|
T Consensus 94 ~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~----~-~~v~~vhnETSTGv~npv---~~i~~~~--~~~lliVD 161 (374)
T TIGR01365 94 KGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF----K-NDVVFTWNGTTSGVRVPN---GDFIPAD--REGLTICD 161 (374)
T ss_pred HHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC----C-CCEEEecCCCchheeccc---ccccccc--CCCcEEEE
Confidence 33 3 56777888 4676653 3455688888873 1 235677777899999765 3444222 48999999
Q ss_pred cCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh---------------
Q 019298 213 EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--------------- 277 (343)
Q Consensus 213 ~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~--------------- 277 (343)
.+-+... .+..+. +-.+++.|..|.+++++ .+++++++++ .+++.+.
T Consensus 162 avSs~g~----~~l~~d-----~iDv~~tgsQK~L~~pp-Gls~v~vs~~--------Al~~~~~~~~y~~~~~~~~~~~ 223 (374)
T TIGR01365 162 ATSAAFA----QDLDYH-----KLDVVTFSWQKVLGGEG-AHGMLILSPR--------AVARLESYTPAWPLPKIFRLTK 223 (374)
T ss_pred ccchhcC----CCCChh-----HCcEEEEechhccCCCC-ceEEEEECHH--------HHHHHhhcCCCCCChhhhcccc
Confidence 9987632 212222 12378888999998844 2567777542 3332221
Q ss_pred -------hh-ccccCcchH-HHHHHHhccchhhHH--HHH-HHHHHHHHHHHHHHhhcCCCCcee
Q 019298 278 -------YF-DILGDPATF-IQVCIMYGCLSTIMQ--IMI-HGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 278 -------~~-~~~~~~~~~-~~~a~~~~~l~~~~~--~l~-~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
.. ..+..+++. ...++ ..+|....+ -++ +.++++++.+.++++++.++.+..
T Consensus 224 ~~~~~~~~~~~~t~~TP~v~~l~a~-~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~ 287 (374)
T TIGR01365 224 GGKLNKKIFEGSTINTPSMLCVEDW-LDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHF 287 (374)
T ss_pred ccchhhhhhcCCCCCChHHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 01 112222222 22222 222221111 122 889999999999999999832554
No 370
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.92 E-value=3.6e-07 Score=82.37 Aligned_cols=245 Identities=15% Similarity=0.134 Sum_probs=160.4
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcE-EEecChHHHHHHHHHHhc----C-CC---CeEEEeCCCCcchHHHHHhcCce
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDV-FVTSGCTQAIDVAMALLS----R-PG---ANILLPRPGFPIYELSAAFRHIE 147 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i-~~~~g~~~al~~~~~~l~----~-~g---d~vl~~~p~~~~~~~~~~~~g~~ 147 (343)
++...+..++.+++...++.+ .+.+ ..|+|+|+++....+... . .| ..++.+.-.+..+...++..+.+
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~--~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~ 193 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP--SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVE 193 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC--ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEE
Confidence 456778888888877766644 3333 578899999665555431 1 22 46777788888899999999999
Q ss_pred eEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh-cCcEEEEccCCCccccC--CCC
Q 019298 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK-LKTLVIADEVYGHLVFG--DKP 224 (343)
Q Consensus 148 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~-~~~~~i~D~ay~~~~~~--~~~ 224 (343)
+..+++++ .++.+|+.++.+.+++++..++...|+-|+|.. +++++|.++..+ +++.+.+|.+-++|.-. ...
T Consensus 194 l~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~ 269 (491)
T KOG1383|consen 194 LREVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLN 269 (491)
T ss_pred EEeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccccccC
Confidence 99999977 678999999999999999999999999999999 999999999988 99999999999998752 111
Q ss_pred CCcccccCCCCCEEE-EccCccccCCCCCcEEEEEEeCCCCCCCchHHH---HHHhhhh---ccccCcchHHHHHHHhc-
Q 019298 225 FVPMGVFGSTVPILT-LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV---ERMKKYF---DILGDPATFIQVCIMYG- 296 (343)
Q Consensus 225 ~~~~~~~~~~~~~i~-~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~---~~l~~~~---~~~~~~~~~~~~a~~~~- 296 (343)
...+. +.. ..|-. .-+.+|- |+.--..||++-.+.+.+- .++. +-+.... .+.++-+. +|.++..+
T Consensus 270 ~~~fd-Fr~-p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~~~~--~q~~~~~~w~Gg~y~s~TlngSR~g-~~va~~wa~ 343 (491)
T KOG1383|consen 270 EEEFD-FRV-PGVTSISADGHKY-GLAPAGSSWVLYRNKELLP--HQLFFHTDWLGGIYASPTLNGSRPG-SQVAAQWAA 343 (491)
T ss_pred ccccc-cCC-CCceeEeecccee-eeeecCcEEEEEccccccc--ceEEEeccccCccccCcccccCCcc-cHHHHHHHH
Confidence 11111 111 12222 2234555 6755568998876643111 0110 0111111 11111111 22222122
Q ss_pred cchh-hHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 297 CLST-IMQIMIHGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 297 ~l~~-~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
+++- -..|.+..+++.+....+.+.+++++++.+..+
T Consensus 344 ~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk 381 (491)
T KOG1383|consen 344 LMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK 381 (491)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC
Confidence 2221 145555778888888999999999888885433
No 371
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.90 E-value=6.1e-07 Score=81.20 Aligned_cols=262 Identities=13% Similarity=0.026 Sum_probs=142.8
Q ss_pred eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC-C-------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSE-K-------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 108 (343)
.++|+-|= -..|+++++++++.+-+- . .+...+ -..++-+.+.+.+++.++.+-+.+=+++..|
T Consensus 5 ~~nF~aGP------a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~--~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~Gg 76 (364)
T PRK12462 5 QLNFSGGP------GALPDTVLEQVRQAVVELPETGLSVLGMSHRSS--WFSSLLAQAEADLRDLLGIPDEYGVVFLQGG 76 (364)
T ss_pred cceecCCC------cCCCHHHHHHHHHHHhcccccCccccccccccH--HHHHHHHHHHHHHHHHhCCCCCCeEEEEecc
Confidence 56777663 346788888877666431 1 222222 1233444444444444444323333455666
Q ss_pred hHHHHHHHHHHhcCCCCeEE-EeCCCCcc--hHHHHHhcCceeEEeecCCC--CCCCCCHHHHHhhhcCCceEEEEeCCC
Q 019298 109 CTQAIDVAMALLSRPGANIL-LPRPGFPI--YELSAAFRHIEVRHFDLLPD--KGWEVDLDDIESLADQNTVALVIINPG 183 (343)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vl-~~~p~~~~--~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~i~~~~p~ 183 (343)
++.++..+...|+.+||+++ +..-++.+ +...++.+| ++..+..... .+..++.+.++ ++++.+.+.+|+-.
T Consensus 77 gT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~~d~~~v~~t~NE 153 (364)
T PRK12462 77 SSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELD--WDARAPFRHYVSNE 153 (364)
T ss_pred HHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cCCCCcEEEEccCC
Confidence 99999999999999999654 44444432 233445555 4444432111 12334555552 23356677777777
Q ss_pred CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (343)
Q Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~ 263 (343)
..||+.++ ++.+.++.++|+|.+-..+. .+..+..+ .++..|..|.+|.+| ++.++.+++.
T Consensus 154 TstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~-----dvi~agsQKnlgP~G--ltvvivs~~a 214 (364)
T PRK12462 154 TVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAY-----GMVYAHAQKNLGPAG--VTVAIIRRAL 214 (364)
T ss_pred CCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHc-----cEEEeeccccCCCCc--eEEEEECHHH
Confidence 79999986 22334689999999987632 22333333 277778899999887 5777776432
Q ss_pred CCCCc---hHHHHHHhhh-hcccc-CcchHHHHHHHhccchhh-HH--HHH-HHHHHHHHHHHHHHhhcCCCCce
Q 019298 264 GMFRK---PKVVERMKKY-FDILG-DPATFIQVCIMYGCLSTI-MQ--IMI-HGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 264 ~~~~~---~~~~~~l~~~-~~~~~-~~~~~~~~a~~~~~l~~~-~~--~l~-~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
.-... |.+.+..... ..... .++...-.++ ...|+-. .+ -++ +.++.+++.+.+++.+...+|+.
T Consensus 215 l~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l-~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~ 288 (364)
T PRK12462 215 LERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVM-ALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVI 288 (364)
T ss_pred HhhccccCCchhhHHHHHhcCCCCCCchHHHHHHH-HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 10000 1111110111 11122 3333433333 3332211 11 122 77888888999999998876554
No 372
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.88 E-value=1.5e-07 Score=81.11 Aligned_cols=258 Identities=18% Similarity=0.138 Sum_probs=156.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+...+||=.+.-.. +.-..+|.+.++++++.+.-.+ ..|.+. ..++.+.+.+++ ..+.|+.++.+.
T Consensus 58 Gk~ylDflsaysaV-nqGhchpki~~aLqeq~~kLtlssrafYnd~--~~~f~~~vt~lf--------~~~kvlpmnTGa 126 (427)
T KOG1402|consen 58 GKEYLDFLSAYSAV-NQGHCHPKIIKALQEQADKLTLSSRAFYNDV--LGEFAEYVTKLF--------GYDKVLPMNTGA 126 (427)
T ss_pred ccchhhhhhhhhhc-ccCCCCHHHHHHHHHHHhHhhhhhHHHhhhh--HHHHHHHHHHhc--------Ccceeeecccch
Confidence 55566664433111 1234789999999998874321 123332 235555565555 467888888889
Q ss_pred HHHHHHHHHhc------C--CC--CeEEEeCCCCcchHHHHHhcCce--------------eEEeecCCCCCCCCCHHHH
Q 019298 111 QAIDVAMALLS------R--PG--ANILLPRPGFPIYELSAAFRHIE--------------VRHFDLLPDKGWEVDLDDI 166 (343)
Q Consensus 111 ~al~~~~~~l~------~--~g--d~vl~~~p~~~~~~~~~~~~g~~--------------~~~~~~~~~~~~~~d~~~l 166 (343)
++.+.+++... + |. ..|+...-+|++-.-.+...+.+ +..+++ =|.++|
T Consensus 127 Ea~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~eal 199 (427)
T KOG1402|consen 127 EAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDAEAL 199 (427)
T ss_pred hHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCHHHH
Confidence 99999987763 1 32 24444444544322111112111 111211 168999
Q ss_pred HhhhcCCceEEEEeCC-CCCcccccCH-HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCc
Q 019298 167 ESLADQNTVALVIINP-GNPCGNVYSY-QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244 (343)
Q Consensus 167 ~~~~~~~~~~i~~~~p-~nptG~~~~~-~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 244 (343)
+.++++...+.++..| +.-.|++.|. ..+++..++|++||+++|.||++.++...|+-. . -.+..-...+++ |.
T Consensus 200 e~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~l-a-~d~env~PDivi--lg 275 (427)
T KOG1402|consen 200 EVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLL-A-CDYENVRPDIVI--LG 275 (427)
T ss_pred HHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEE-E-eehhhcCCCeEE--Ee
Confidence 9999886666677777 7888888654 689999999999999999999999987766521 1 111111122444 57
Q ss_pred cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHh
Q 019298 245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPS 321 (343)
Q Consensus 245 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~ 321 (343)
|+++..=..+..+++++ ++.-.++-.. ..++..++++.+++ .++|. -..+ +.++-+..-+.++..
T Consensus 276 KalSGG~~Pvsavl~~~--------~im~~~~pgeHgsTyggNpLg~~va-iAale---vi~eekL~era~~lG~~l~~~ 343 (427)
T KOG1402|consen 276 KALSGGVYPVSAVLADD--------DIMLNIKPGEHGSTYGGNPLGCAVA-IAALE---VIVEEKLVERAAKLGEILRDQ 343 (427)
T ss_pred ccccCCeeeeEEEEecH--------HHHhccCCCccccccCCChHHHHHH-HHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 99766668888888854 4555444332 23556777777666 34432 1222 666666666777777
Q ss_pred hcCC
Q 019298 322 YKLI 325 (343)
Q Consensus 322 L~~~ 325 (343)
|+++
T Consensus 344 L~~l 347 (427)
T KOG1402|consen 344 LNKL 347 (427)
T ss_pred HHhc
Confidence 7665
No 373
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.86 E-value=6.4e-08 Score=95.99 Aligned_cols=175 Identities=16% Similarity=0.157 Sum_probs=115.0
Q ss_pred CCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh----cC---C-CCeEEEeCCCCcchHH
Q 019298 71 NGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL----SR---P-GANILLPRPGFPIYEL 139 (343)
Q Consensus 71 ~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l----~~---~-gd~vl~~~p~~~~~~~ 139 (343)
+-|.| .+|..++...+.+++.+..|.... .+...+|++ +-...+.++ .. + .++|+++.-.|+....
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~--Sl~p~sGA~-gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa 606 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGFDAI--CMQPNSGAQ-GEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA 606 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCCCeE--eecCCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH
Confidence 45666 567777777777777665543222 334444443 332333332 22 2 3678899988877667
Q ss_pred HHHhcCceeEEeecCCCCCCCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC
Q 019298 140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216 (343)
Q Consensus 140 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~ 216 (343)
.+...|.+++.++.+. +..+|+++|++.++ ++..+|.+.+|++-.+.. +++++|+++|+++|.++++|.++.
T Consensus 607 sa~~~GieVv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~~ 681 (954)
T PRK12566 607 SAQMAGMRVVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGANL 681 (954)
T ss_pred HHHHCCCEEEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeCh
Confidence 7888999999998863 34799999999987 456666777777666554 679999999999999999999986
Q ss_pred ccccCCCCCCcccccCCCCCEEEEccCccccCC----CCCcEEEEEE
Q 019298 217 HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV----PGWRLGWFVT 259 (343)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~----~G~r~G~i~~ 259 (343)
.... .......+ +-.++.++++|+|+. .|.-+|.+.+
T Consensus 682 ~a~~---~l~~Pg~~---GADi~~~s~HKtf~~P~G~GGP~vG~iav 722 (954)
T PRK12566 682 NAQV---GLARPADI---GADVSHMNLHKTFCIPHGGGGPGMGPIGV 722 (954)
T ss_pred hhcc---CCCChhhc---CCCEEEecCCcccCcCccCCCCccchhhh
Confidence 3111 11111222 334999999999863 3444666554
No 374
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.80 E-value=1.1e-08 Score=90.81 Aligned_cols=252 Identities=20% Similarity=0.121 Sum_probs=53.8
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHH-HHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298 52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRR-AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (343)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~-~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~ 130 (343)
+.++++.+++.+....-...+|.-..|...-|. .+.+++.+ -...+..+++++...|+.+++.++. +|..|++.
T Consensus 17 ~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~----ltgAeaA~VvNnnaAAv~L~l~~la-~~~EvIvs 91 (367)
T PF03841_consen 17 PLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCE----LTGAEAALVVNNNAAAVLLALNTLA-KGKEVIVS 91 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccc-cccccccc
Confidence 456777777776654322223432222222221 12222211 1256777888888888888888876 45566665
Q ss_pred CCCCcc------hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc--ccccCHHHHHHHHHHH
Q 019298 131 RPGFPI------YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC--GNVYSYQHLQKLAETA 202 (343)
Q Consensus 131 ~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt--G~~~~~~~l~~l~~~~ 202 (343)
.-.-.. ........|.+.+.+.... .-.++++++++++++.+++-.+++|-. |..-. -.++++++++
T Consensus 92 RGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~el~~la 166 (367)
T PF03841_consen 92 RGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLEELAELA 166 (367)
T ss_dssp --------------------------------------------------------------------------HHHHHH
T ss_pred ccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccc-ccHHHHHHHH
Confidence 433221 3455666788888776431 245788899999999999888887753 33322 2688999999
Q ss_pred hhcCcEEEEccCCCccc----cCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298 203 NKLKTLVIADEVYGHLV----FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278 (343)
Q Consensus 203 ~~~~~~~i~D~ay~~~~----~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~ 278 (343)
++|++++++|..-+.+. ++-...+.+..+-..+-.++++|-.|.+|.|- .|.+++. .++++++++.
T Consensus 167 ~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ--aGiI~Gk--------k~lI~~lk~~ 236 (367)
T PF03841_consen 167 KEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ--AGIIVGK--------KELIEKLKKH 236 (367)
T ss_dssp HHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S---EEEEEE--------HHHHHHHHHH
T ss_pred hhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC--eEEEEeC--------HHHHHHHhhC
Confidence 99999999999885542 11112233444444455699999999976554 7999885 5899999865
Q ss_pred h-ccccCcchHHHHHHHhccchhhH---HHHH----------HHHHHHHHHHHHHHhhcC
Q 019298 279 F-DILGDPATFIQVCIMYGCLSTIM---QIMI----------HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 279 ~-~~~~~~~~~~~~a~~~~~l~~~~---~~l~----------~~~~~~~~~~~~~~~L~~ 324 (343)
. .....+.....+++ .+.|.... +-.+ ..+.++++.+.+.+.|..
T Consensus 237 pl~RalrvdK~tla~L-~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~ 295 (367)
T PF03841_consen 237 PLGRALRVDKLTLAAL-EATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA 295 (367)
T ss_dssp HHTTT-B--HHHHHHH-HHHHHH-------------------------------------
T ss_pred CCcceEeeCHHHHHHH-HHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 2 22456777777666 44443211 1111 445555666666666655
No 375
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.76 E-value=3.5e-07 Score=81.85 Aligned_cols=177 Identities=19% Similarity=0.158 Sum_probs=121.2
Q ss_pred CCCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHH--HHHh-cCC----CCeEEEeCCCCcchHH
Q 019298 70 FNGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA--MALL-SRP----GANILLPRPGFPIYEL 139 (343)
Q Consensus 70 ~~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~--~~~l-~~~----gd~vl~~~p~~~~~~~ 139 (343)
.+-|.| .+|..++...+.+|+.+.-| .+.-.+...+|++.-..-+ ++.. ... .++|++|+..|++...
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG--~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA 172 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKEITG--MDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA 172 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhcC--CceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh
Confidence 445555 35777888888899976433 2222333455554433322 2222 223 3789999999999999
Q ss_pred HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 140 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
++.+.|.+++.++.+. +..+|+++|++.+.++..++.+++||.- |.. .+.+++|+++..++|..+..|.|-..-.
T Consensus 173 SAam~G~~VV~V~~~~--~G~VDlddLk~k~~~~~AalMiTnPsT~-GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~ 247 (496)
T COG1003 173 SAAMAGFKVVVVKCDE--NGNVDLDDLRAKAEDNLAALMITNPSTL-GVF--EEDIREICEIVHEAGGQVYYDGANLNAI 247 (496)
T ss_pred hHhhcCceEEEEecCC--CCCccHHHHHHHhccceeEEEeccCccc-ccc--hhhHHHHHHHHHHcCCEEEecCcchhhh
Confidence 9999999999998874 4469999999999989999999998753 433 2789999999999999999998865433
Q ss_pred cCCCCCCcccccCCCCCEEEEccCccccCC----CCCcEEEEEE
Q 019298 220 FGDKPFVPMGVFGSTVPILTLGSLSKRWIV----PGWRLGWFVT 259 (343)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~----~G~r~G~i~~ 259 (343)
.+-..+..+ +-.++=.-++|+|.. .|...|=|.+
T Consensus 248 vG~~rPGd~------G~DV~HlNLHKTF~iPHGGGGPG~GPvgV 285 (496)
T COG1003 248 VGLARPGDM------GFDVVHLNLHKTFCIPHGGGGPGAGPVGV 285 (496)
T ss_pred hcccccccc------ccceEEeecccccccCCCCCCCCCCceeh
Confidence 332222221 222555678888855 3454555444
No 376
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.65 E-value=7e-06 Score=83.17 Aligned_cols=181 Identities=15% Similarity=0.091 Sum_probs=115.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCC-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTA-----G----LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS 121 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~-----g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~ 121 (343)
...|+.+.+++.+... ....|+|.+ | .-+++..+++++ +++++++.++.+++.+.+.++.++.
T Consensus 115 ~~~P~~v~~~i~~~~~--~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~ 186 (993)
T PLN02414 115 THVPPVILRNILENPG--WYTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNN 186 (993)
T ss_pred ccCCHHHHHHHHhChH--HHhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHh
Confidence 3466777676655432 233565543 2 235777788887 6789999999999999998877762
Q ss_pred -CC--CCeEEEeCCCCcchHHHH----HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 122 -RP--GANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 122 -~~--gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
.+ +++|++++-.|+.+...+ +..|.+++.++.... + ...+....++ .+-.|.+|.+ .+
T Consensus 187 ~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vl-vq~P~~~G~v---~d 251 (993)
T PLN02414 187 ILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVL-VQYPATDGEV---LD 251 (993)
T ss_pred cccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEE-EecCCCCeEE---cC
Confidence 43 478999999998876554 345888887765321 1 1111222333 3334569999 56
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc---CCCCCcEEEEEEeC
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW---IVPGWRLGWFVTTD 261 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~---~~~G~r~G~i~~~~ 261 (343)
+++|+++|+++|+++++ .+... .... ..+...+ +-.|++++..|.. |..|.+.|++.+.+
T Consensus 252 v~~I~~~ah~~GaL~iV-aad~l-al~~--l~~pge~---GADi~vgsgqKwg~P~G~GGP~aGflavr~ 314 (993)
T PLN02414 252 YAEFVKNAHANGVKVVM-ATDLL-ALTM--LKPPGEW---GADIVVGSAQRFGVPMGYGGPHAAFLATSQ 314 (993)
T ss_pred HHHHHHHHHHcCCEEEE-EECHH-HhcC--CCCHhhc---cCcEEEECCCccccCCCCCCCCeeEEEECH
Confidence 88999999999999999 33322 1111 1112222 3348899988884 12556689988864
No 377
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.64 E-value=3.4e-06 Score=85.61 Aligned_cols=176 Identities=18% Similarity=0.168 Sum_probs=117.4
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCC-----CC----HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-C
Q 019298 53 TTHVATEAVAEALLSEKFNGYAPTA-----GL----PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-R 122 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~Y~~~~-----g~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~ 122 (343)
.|+.+.+.+.+- ...+..|.|.+ |. -++++.++++. ++++.++.+..+++.+.+.++.++. .
T Consensus 90 ~P~vi~~~i~~~--~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~Lt------G~~~anaSl~d~aTAa~ea~~~a~~~~ 161 (954)
T PRK05367 90 TPPVILRNILEN--PAWYTAYTPYQPEISQGRLEALLNFQTMVADLT------GLEIANASLLDEATAAAEAMALAKRVS 161 (954)
T ss_pred CcHHHHHHHHhC--cchhhccCCCChHHHHHHHHHHHHHHHHHHHHH------CCChhhccccccHHHHHHHHHHhhhhc
Confidence 445554544331 12355677753 21 24666777776 6788999999999999998887763 3
Q ss_pred C--CCeEEEeCCCCcchHHH----HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHH
Q 019298 123 P--GANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQ 196 (343)
Q Consensus 123 ~--gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~ 196 (343)
+ +++|++++-.|+.+... ++..|.+++.++... + ++ .+++..+++.+ .|.+|.+ ++++
T Consensus 162 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d--~~--------~~~~~~vlvq~-p~~~G~i---~d~~ 225 (954)
T PRK05367 162 KSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--A--LD--------HDDVFGVLLQY-PGTSGEV---RDYT 225 (954)
T ss_pred cCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--C--CC--------cccEEEEEEec-CCCCeee---ccHH
Confidence 4 48999999999887654 455788988887532 1 11 12343444445 4789999 5689
Q ss_pred HHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc-----cCCCCCcEEEEEEeC
Q 019298 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR-----WIVPGWRLGWFVTTD 261 (343)
Q Consensus 197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-----~~~~G~r~G~i~~~~ 261 (343)
+|+++|+++|+++++|.....+.... +...+ +-.|+++|..|. ||.|| .|++.+.+
T Consensus 226 ~i~~~ah~~Gal~~vda~~~Al~~l~----~pge~---GaDi~vgs~qkfg~P~g~GGP~--aGflavr~ 286 (954)
T PRK05367 226 ALIAAAHARGALVAVAADLLALTLLT----PPGEM---GADIAVGSAQRFGVPMGFGGPH--AAYFAVRD 286 (954)
T ss_pred HHHHHHHHcCCEEEEEehhhhccCCC----Chhhc---CCCEEEeeCcccCCCCCCCCCC--EEEEEECH
Confidence 99999999999999987553322111 12222 334999999997 66665 89888854
No 378
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.58 E-value=8.8e-06 Score=71.31 Aligned_cols=251 Identities=14% Similarity=0.096 Sum_probs=150.9
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC-----CCCeEEEeCCCC-cchHHHHHhcC
Q 019298 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----PGANILLPRPGF-PIYELSAAFRH 145 (343)
Q Consensus 72 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~gd~vl~~~p~~-~~~~~~~~~~g 145 (343)
.|.-+.+.-.|.+++.+.+ .-+.++.|.-+..|=+.++..+.+ ||.+..+++..| .+...-.+..|
T Consensus 74 AYagsrs~~~L~~avkdif--------Gfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng 145 (471)
T COG3033 74 AYAGSRSYYALADAVKDIF--------GFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQING 145 (471)
T ss_pred hhcccccHHHHHHHHHHhc--------CceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcC
Confidence 5777788889999999988 247788887777777766666654 455555555555 44455566677
Q ss_pred ceeEEeecCCCC--------CCCCCHHHHHhhhcC----CceEEEEe-CCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 146 IEVRHFDLLPDK--------GWEVDLDDIESLADQ----NTVALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 146 ~~~~~~~~~~~~--------~~~~d~~~l~~~~~~----~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
...+.+.++.-. ...+|++.|++.+.+ +...|++. +.|...|+..|.+.+++..++|++|++.++.|
T Consensus 146 ~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~D 225 (471)
T COG3033 146 ATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMD 225 (471)
T ss_pred CccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEee
Confidence 777666544321 245799999998865 34555544 44668999999999999999999999999999
Q ss_pred cCCC-ccccC---C-CC--CCcccccCC--C-CCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhh--
Q 019298 213 EVYG-HLVFG---D-KP--FVPMGVFGS--T-VPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYF-- 279 (343)
Q Consensus 213 ~ay~-~~~~~---~-~~--~~~~~~~~~--~-~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~-- 279 (343)
.+-. +..|- . +. ..++..... . --.-+..|.-|. ++.- + |++...++. .. ++-..++...
T Consensus 226 a~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD-~lvn--mGGfl~~~D~~-~f---Dvy~~~~~~~V~ 298 (471)
T COG3033 226 AARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKD-GLVN--MGGFLCFKDDS-FF---DVYEECRTLVVV 298 (471)
T ss_pred hhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccc-ceec--cccEEEecCcc-HH---HHHHHHHhheEe
Confidence 7643 22211 0 11 111111000 0 012566788888 5533 3 455554432 11 3455555441
Q ss_pred ----ccccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 280 ----DILGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 280 ----~~~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
..+++.+.-...++ ..-|.+. ..|+. .++ +..+++.+.|.+. |+++..|.||.-+|++
T Consensus 299 ~eG~~tYGgl~Grdmeal-AvGL~e~~~~~yl~--~Rv-~Qv~YL~~~l~~~-GVpi~~paGGHavfvd 362 (471)
T COG3033 299 QEGFPTYGGLAGRDMEAL-AVGLREGVNFDYLA--HRV-AQVQYLADGLEEA-GVPIVQPAGGHAVFVD 362 (471)
T ss_pred eccccccCcccchhHHHH-HHHHHHhcCcHHHH--HHH-HHHHHHHHHHHhc-CCeeEecCCCceEEee
Confidence 12233333333343 2222221 22222 222 3345667777777 8998899999998886
No 379
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.50 E-value=1.9e-05 Score=68.43 Aligned_cols=146 Identities=16% Similarity=0.117 Sum_probs=102.8
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhcC--CCCeEEEeCCCCcc-----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhh
Q 019298 97 KLTPNDVFVTSGCTQAIDVAMALLSR--PGANILLPRPGFPI-----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL 169 (343)
Q Consensus 97 ~~~~~~i~~~~g~~~al~~~~~~l~~--~gd~vl~~~p~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 169 (343)
+..+.+++++.+++-.++.++.+..+ +|+.|++++-.-.+ .+..+...+... . -...+.+++++++
T Consensus 90 GA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~---~----~~~~~~P~~~~~~ 162 (407)
T COG3844 90 GARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGY---D----LEGVIAPRALEEA 162 (407)
T ss_pred cCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccc---c----ceeeeChHHHHHh
Confidence 56889999999999888888877653 58888887654432 233444443321 1 1123467799999
Q ss_pred hcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC
Q 019298 170 ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249 (343)
Q Consensus 170 ~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 249 (343)
+.+++.++++++.+.-||+.+ ++.+|-+++++++++++.|-+|+... -+.. +...+-.+.|++..|-+..
T Consensus 163 ~~dd~AvV~L~~V~y~TGql~---dm~aiT~~AH~~galv~wDLAHsaGa----vp~~---Lh~~gaDfaigcsyKYLNg 232 (407)
T COG3844 163 ITDDVAVVLLSHVNYKTGQLL---DMRAITALAHQHGALVGWDLAHSAGA----VPVD---LHAAGADFAIGCSYKYLNG 232 (407)
T ss_pred hccceEEEEecccccccccee---eHHHHHHHHHhcCceEEeehhcccCC----ccee---ecccCCCeeeeeeceeccC
Confidence 999999999999999999996 46777888889999999999998632 1122 3333445899999998765
Q ss_pred -CCCcEEEEEE
Q 019298 250 -PGWRLGWFVT 259 (343)
Q Consensus 250 -~G~r~G~i~~ 259 (343)
||-..|.-+.
T Consensus 233 GPGapa~l~v~ 243 (407)
T COG3844 233 GPGAPAGLFVA 243 (407)
T ss_pred CCCCceeEEec
Confidence 6655444443
No 380
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.48 E-value=6.2e-05 Score=66.25 Aligned_cols=276 Identities=14% Similarity=0.110 Sum_probs=151.4
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhh--CCCCCCCC----cEEEecChHHHHHHHHHHhcCC
Q 019298 52 HTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRD--LPYKLTPN----DVFVTSGCTQAIDVAMALLSRP 123 (343)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~--~~~~~~~~----~i~~~~g~~~al~~~~~~l~~~ 123 (343)
-...++.+++-..+.+.-..+|+-. .|-.++...+--+..++ --++++|+ +|.. -+++.|...+..++++|
T Consensus 51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp-~SGSPANfavYtall~P 129 (477)
T KOG2467|consen 51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQP-YSGSPANFAVYTALLKP 129 (477)
T ss_pred chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeecc-CCCCchhhHHHhhhcCC
Confidence 3678899999888876555556542 23345554443333221 01234554 3333 44577788888899999
Q ss_pred CCeEEE-eCCCCcchHHHHHhcC----ceeE-----EeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCH
Q 019298 124 GANILL-PRPGFPIYELSAAFRH----IEVR-----HFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 124 gd~vl~-~~p~~~~~~~~~~~~g----~~~~-----~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~ 192 (343)
++++.- .-|.=+...+....-+ +.-+ ++.+++. ..-+|.|.||+.... +|++|+. ..+ .....+
T Consensus 130 h~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~-TG~IDYD~Le~~A~~frPk~iia-G~S-aY~R~~-- 204 (477)
T KOG2467|consen 130 HERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPS-TGYIDYDKLEKTATLFRPKLIIA-GTS-AYSRLI-- 204 (477)
T ss_pred CCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCC-CCceehHHHHHHHHhcCCcEEEe-ccc-cchhhc--
Confidence 988762 2232221212111111 1111 2233443 345899999986655 5665553 222 122233
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC---c
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR---K 268 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~---~ 268 (343)
+..++.++|.+.|.+++.|.+|.. ++-.+.-+.++... .|+..+.+|+ +.|.|.|.|.-........ .
T Consensus 205 -DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~-----DiVTTTTHKs--LRGPRg~mIFyRkGvk~~~~k~g 276 (477)
T KOG2467|consen 205 -DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYC-----DIVTTTTHKS--LRGPRGAMIFYRKGVKSIKPKQG 276 (477)
T ss_pred -cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccccc-----ceeecccccc--ccCCcceeEEEeccCCcCCCCCC
Confidence 345566666688999999999984 34333333343322 2899999999 7899999887643211110 0
Q ss_pred h----HHHHHHhhh-hc-cccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCCCCceEe
Q 019298 269 P----KVVERMKKY-FD-ILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKSTGSSLK 339 (343)
Q Consensus 269 ~----~~~~~l~~~-~~-~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~~~ 339 (343)
. ++-+++... .. .-+++.-..-.++ ..+|.. ..++-+..+++.++...+.+.|.+. |+. +........+
T Consensus 277 ~~i~ydlE~kINfaVFP~lQGGPHNhtIaal-AvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlv 354 (477)
T KOG2467|consen 277 KEILYDLEDKINFAVFPGLQGGPHNHTIAAL-AVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLV 354 (477)
T ss_pred CcceechhhhhhhhccccccCCCCcchHHHH-HHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEE
Confidence 0 122222211 11 1122222222333 223332 2666678888999999999999888 777 4444455555
Q ss_pred eecC
Q 019298 340 YLDL 343 (343)
Q Consensus 340 ~~~l 343 (343)
.+||
T Consensus 355 LvDL 358 (477)
T KOG2467|consen 355 LVDL 358 (477)
T ss_pred EEec
Confidence 5543
No 381
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.33 E-value=1.5e-05 Score=71.55 Aligned_cols=168 Identities=13% Similarity=0.143 Sum_probs=101.2
Q ss_pred CcEEEecChHH-HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhhcC---C
Q 019298 101 NDVFVTSGCTQ-AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQ---N 173 (343)
Q Consensus 101 ~~i~~~~g~~~-al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~---~ 173 (343)
...++++.++. .+.+.+.++. ..++.|+.+.-.+.+...++..+|++++.++...+ +....|.+.+++.+++ .
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~ 154 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGAD 154 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGG
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCC
Confidence 45666666543 3444444453 45789999998888888899999999998885433 3334567778877753 4
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEEccCccccCCCCC
Q 019298 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGW 252 (343)
Q Consensus 174 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~~~~G~ 252 (343)
..+.++++++.-.+... +++++|+++|+++|+..|+..||+.-... -...+......++ .+++.|+-|.|..|-
T Consensus 155 ~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~~--~~~~i~~a~~~GRvda~vqS~dkNF~VPv- 229 (389)
T PF05889_consen 155 NILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSSK--CMHLIQQAWRVGRVDAFVQSTDKNFMVPV- 229 (389)
T ss_dssp GEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HH--HHHHHHHHHHHSTCSEEEEEHHHHHCEES-
T ss_pred CeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhHHH--HHHHHHHHHhcCCcceeeeecCCCEEecC-
Confidence 56667777765455542 46999999999999999999999862100 0000111111122 278999999986642
Q ss_pred cEEEEEEeCCCCCCCchHHHHHHhhhhc
Q 019298 253 RLGWFVTTDPCGMFRKPKVVERMKKYFD 280 (343)
Q Consensus 253 r~G~i~~~~~~~~~~~~~~~~~l~~~~~ 280 (343)
. |-++++. ++..+..+.+...
T Consensus 230 G-gai~As~------~~~~i~~vs~~Yp 250 (389)
T PF05889_consen 230 G-GAIMASF------DPSGILAVSKEYP 250 (389)
T ss_dssp S-HEEEEES------SHHHHHHHHHTSH
T ss_pred C-CcEEEec------CHHHHHHHHHHhh
Confidence 2 3444443 4678888877653
No 382
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.29 E-value=0.00024 Score=71.50 Aligned_cols=140 Identities=15% Similarity=0.173 Sum_probs=92.9
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCC-----CC----HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTA-----GL----PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS 121 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~-----g~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~ 121 (343)
.-.|+.+.+.+.+- ...+..|.|.+ |. -++.+.++++. +.+..|.-+..+++.+.+.++.+..
T Consensus 76 ~~~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt------Gm~~aNaSl~d~atA~aEa~~~a~~ 147 (939)
T TIGR00461 76 TILPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT------GLPVANASLLDEGTAAAEAMALSFN 147 (939)
T ss_pred CcCChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH------CCChhhhhccchhhHHHHHHHHHHH
Confidence 34567776554431 22345677643 21 13555566666 5677787888888887776665542
Q ss_pred ---CCCCeEEEeCCCCcchHHHHH----hcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 122 ---RPGANILLPRPGFPIYELSAA----FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 122 ---~~gd~vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
+++++|++++-.|+.+....+ ..|.+++.+ |.++|++.+ ++..+++.+|+ -.|.+ ++
T Consensus 148 ~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~----------~~~~l~~~~--~~~~v~~q~Pn-~~G~i---ed 211 (939)
T TIGR00461 148 VSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV----------DCSDIKKAV--DVFGCLLQYPA-TDGSI---LD 211 (939)
T ss_pred hhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE----------cHHHHhhcC--CEEEEEEECCC-CCeEE---ec
Confidence 234799999999988775444 667777765 345566554 35555666665 58888 68
Q ss_pred HHHHHHHHhhcCcEEEEccC
Q 019298 195 LQKLAETANKLKTLVIADEV 214 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~a 214 (343)
+++|+++++++|.+++++.-
T Consensus 212 ~~~i~~~~h~~gal~~~~ad 231 (939)
T TIGR00461 212 YKQLIDALHSHKSLVSVAAD 231 (939)
T ss_pred HHHHHHHHHHcCCEEEEEec
Confidence 99999999999999998543
No 383
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.11 E-value=0.0004 Score=64.01 Aligned_cols=222 Identities=19% Similarity=0.216 Sum_probs=114.2
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh---cCCCCeEEEeCCCCcchHHHHH----hcCceeEEeec
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---SRPGANILLPRPGFPIYELSAA----FRHIEVRHFDL 153 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~----~~g~~~~~~~~ 153 (343)
++...++++. +.+.-+.-+-.|++.+-+.++.+. .+.+++|+++.-.|+.+....+ ..|.+++.++.
T Consensus 114 e~Qs~i~eLT------GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~ 187 (429)
T PF02347_consen 114 EYQSMICELT------GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPL 187 (429)
T ss_dssp HHHHHHHHHH------TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-B
T ss_pred HHHHHHHHhh------CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecc
Confidence 3445555555 334334455566666555554443 3344699999999999877444 35788888776
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
+... ..| ++++.++++.+||. .|.+ +++++|+++++++|.++++ .+- ......- .+...++.
T Consensus 188 ~~~~--~~d--------~~~~a~v~vq~Pn~-~G~~---ed~~~i~~~~h~~gal~~~-~ad-~~aL~~l--~~Pge~GA 249 (429)
T PF02347_consen 188 DEDG--TTD--------DDDTAAVMVQNPNT-FGVF---EDIKEIADIAHAAGALVIV-GAD-PNALGGL--KSPGEYGA 249 (429)
T ss_dssp BTTC--SB---------STTEEEEEEESS-T-TSB-----THHHHHHHHHHTT-EEEE-CGG-CCGCCTC----GGGGT-
T ss_pred cccC--Ccc--------ccCeEEEEeecCCC-CceE---eeHHHHHHHHHHcCCEEEE-ecC-HHHHhCc--CChhhcCc
Confidence 5432 223 55788889999985 7888 7799999999999999887 332 2222211 11222332
Q ss_pred CCCEEEEccCccccCC----CCCcEEEEEEeCCC----------------CCC------Cc-hHHHHHHhhhhccccCcc
Q 019298 234 TVPILTLGSLSKRWIV----PGWRLGWFVTTDPC----------------GMF------RK-PKVVERMKKYFDILGDPA 286 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~----~G~r~G~i~~~~~~----------------~~~------~~-~~~~~~l~~~~~~~~~~~ 286 (343)
.|++++ +|.||. .|...|++.+.+.- +.. +. .+.|++-+...++..+..
T Consensus 250 ---DI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqa 325 (429)
T PF02347_consen 250 ---DIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQA 325 (429)
T ss_dssp ---SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-H
T ss_pred ---cEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHH
Confidence 377776 888765 35667887775421 000 00 012222111111111111
Q ss_pred hHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 287 TFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 287 ~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
-.+..+..+.++--+.-+.+..++...+..++.+.|.++.++.+
T Consensus 326 L~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~ 369 (429)
T PF02347_consen 326 LLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF 369 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 11222222333333344444888888999999999998634433
No 384
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.00 E-value=0.00054 Score=62.29 Aligned_cols=143 Identities=11% Similarity=0.170 Sum_probs=97.4
Q ss_pred CCCCCCCHHHHHHHHHHHhhhCCCC-------C-CCCcEEEecChHHHHHHHHHHh-------cCCC------------C
Q 019298 73 YAPTAGLPLTRRAIAEYLSRDLPYK-------L-TPNDVFVTSGCTQAIDVAMALL-------SRPG------------A 125 (343)
Q Consensus 73 Y~~~~g~~~lr~~ia~~~~~~~~~~-------~-~~~~i~~~~g~~~al~~~~~~l-------~~~g------------d 125 (343)
+...+...+|+.-+-+|+.+..+.+ . +...|+..+. +++...++.+. .+.+ -
T Consensus 105 W~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~ta-ses~lvallaaR~~~i~~~k~~~p~~~e~~~~~~l 183 (511)
T KOG0628|consen 105 WASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTA-SESVLVALLAARTEKIEEIKSRPPELHESSVLARL 183 (511)
T ss_pred eecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCc-chhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhh
Confidence 3344567899999999998866543 1 2224444444 44444443332 1111 2
Q ss_pred eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC-----ceEEEEeCCCCCcccccCHHHHHHHHH
Q 019298 126 NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN-----TVALVIINPGNPCGNVYSYQHLQKLAE 200 (343)
Q Consensus 126 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~-----~~~i~~~~p~nptG~~~~~~~l~~l~~ 200 (343)
.+.+.+-++.+....+...|.+.+.++.+. +++++.+.|++++.++ ++.+++.+- .-||.+ ..+++.+|..
T Consensus 184 V~Y~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~-GTT~~c-a~D~l~elg~ 259 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATL-GTTSSC-AFDELEELGP 259 (511)
T ss_pred eEEecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEee-cCcccc-ccccHHHhcc
Confidence 567888999999999999999998888764 8899999999998652 233333332 222222 3378999999
Q ss_pred HHhhcCcEEEEccCCCcccc
Q 019298 201 TANKLKTLVIADEVYGHLVF 220 (343)
Q Consensus 201 ~~~~~~~~~i~D~ay~~~~~ 220 (343)
+|+++++|+.+|.+|++..+
T Consensus 260 Vc~~~glWLHVDAAYAGsa~ 279 (511)
T KOG0628|consen 260 VCREEGLWLHVDAAYAGSAF 279 (511)
T ss_pred hhhhcCEEEEeehhhccccc
Confidence 99999999999999997544
No 385
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.98 E-value=0.00013 Score=65.50 Aligned_cols=180 Identities=13% Similarity=0.083 Sum_probs=105.6
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-------CCC-----CeE-EEeCCCCcchH
Q 019298 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-------RPG-----ANI-LLPRPGFPIYE 138 (343)
Q Consensus 72 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-------~~g-----d~v-l~~~p~~~~~~ 138 (343)
.|...++..-..+.+-....+-.|+.-..|.|+.-.|+.+.+....-+-- ..| +-| ...+-+|.+..
T Consensus 132 TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~ 211 (510)
T KOG0629|consen 132 TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIK 211 (510)
T ss_pred eEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHH
Confidence 34433333334444444444434555455666655555555554432211 111 334 45577888889
Q ss_pred HHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhcC---C--ceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEE
Q 019298 139 LSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQ---N--TVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLV 209 (343)
Q Consensus 139 ~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~---~--~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~ 209 (343)
..+..+|+ .++.++.+ ....+++++||+.+-+ + .+.++-++. ..-.|.. +++..++++|++|++|+
T Consensus 212 kaAa~lg~gtd~c~~v~t~--e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~lWm 286 (510)
T KOG0629|consen 212 KAAAFLGLGTDHCIKVKTD--ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHKLWM 286 (510)
T ss_pred HHHHHhccCCceeEEeccc--ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcCEEE
Confidence 99999994 56666654 3457999999997743 1 234333333 5677887 89999999999999999
Q ss_pred EEccCCCccccCCCCCC-cccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 210 IADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 210 i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
.+|.||++...-+.... .+...... -=+.++.+|..| +.+.++..+.
T Consensus 287 HvDAAwGGglLmS~k~R~kl~Giera--~SvtwnpHK~~g-aplqCsa~l~ 334 (510)
T KOG0629|consen 287 HVDAAWGGGLLMSRKHRHKLTGIERA--NSVTWNPHKLMG-APLQCSAFLT 334 (510)
T ss_pred EeecccccccccChhhHhhccCcccc--CceeecHHHhhc-CcchhhHHHH
Confidence 99999998433222111 11111111 146778899954 4444554433
No 386
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.96 E-value=0.00047 Score=59.29 Aligned_cols=225 Identities=13% Similarity=0.047 Sum_probs=128.2
Q ss_pred CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh---cCCCCeEE
Q 019298 53 TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---SRPGANIL 128 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l---~~~gd~vl 128 (343)
.+|++.++...++..... +++. ..+|-+....+... --.-+-++++++++++..++++.. .+.-|.|.
T Consensus 62 chp~VV~A~~kQmat~~tN~RFl----hd~lv~cA~~l~st----lPeLsvc~F~NSGSEANDLALRLAR~ftkhqDvIt 133 (452)
T KOG1403|consen 62 CHPEVVRAGAKQMATISTNNRFL----HDELVQCARTLTST----LPELSVCFFVNSGSEANDLALRLARNFTKHQDVIT 133 (452)
T ss_pred CCHHHHHHHHHHHhHhcccchhh----HHHHHHHHHHHhhc----CCCceEEEEecCCchhhHHHHHHHHhhcccCceEE
Confidence 678888887777654321 1222 23444444444321 012346678999999999998875 34445555
Q ss_pred EeCCCCcchHHHH-Hhc------Cc-----eeEEeecCCCC-------------C-CCCCHHHHHhhhcC----Cce-EE
Q 019298 129 LPRPGFPIYELSA-AFR------HI-----EVRHFDLLPDK-------------G-WEVDLDDIESLADQ----NTV-AL 177 (343)
Q Consensus 129 ~~~p~~~~~~~~~-~~~------g~-----~~~~~~~~~~~-------------~-~~~d~~~l~~~~~~----~~~-~i 177 (343)
+. ..|.+..... ... |. +.+.+...|+- + ...-.+.+++.+.+ ..+ +.
T Consensus 134 ld-HAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAA 212 (452)
T KOG1403|consen 134 LD-HAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAA 212 (452)
T ss_pred Ee-chhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHH
Confidence 44 4554322211 110 11 12222111110 0 01112333333321 222 22
Q ss_pred EEe-CCCCCcccccCH-HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298 178 VII-NPGNPCGNVYSY-QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255 (343)
Q Consensus 178 ~~~-~p~nptG~~~~~-~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 255 (343)
++. +-++-.|+++|+ ...+++++..+.+|.+.|.||++-+|..-++.+.++..++-.+. | -++.|.+ ..|..++
T Consensus 213 fiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPD-I--VtmgKpm-GNGhPVa 288 (452)
T KOG1403|consen 213 FIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPD-I--VTMGKPM-GNGHPVA 288 (452)
T ss_pred HHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccc-h--heecccC-CCCCeee
Confidence 332 335667777655 56789999999999999999999998877777777666653222 3 3568994 6999999
Q ss_pred EEEEeCCCCCCCchHHHHHHhhhh---ccccCcchHHHHHHHhccch
Q 019298 256 WFVTTDPCGMFRKPKVVERMKKYF---DILGDPATFIQVCIMYGCLS 299 (343)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~~l~ 299 (343)
.+++. +++.+.+...- ..+++.+|.+-+++ .+.|+
T Consensus 289 ~Vatt--------keIA~Af~atgv~YFNTyGGnPVsCAv~-laVm~ 326 (452)
T KOG1403|consen 289 AVATT--------KEIAQAFHATGVEYFNTYGGNPVSCAVG-LAVMR 326 (452)
T ss_pred EEecc--------HHHHHHhccccceehhccCCCchhHHHH-HHHHH
Confidence 99884 47888887631 12456677776666 44443
No 387
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.72 E-value=0.025 Score=51.44 Aligned_cols=258 Identities=20% Similarity=0.204 Sum_probs=138.5
Q ss_pred eccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC-----CC----HHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 40 LAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA-----GL----PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 40 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~-----g~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
++.|..+ .-.|+.+.+.+.+ +...+..|.|.+ |. -++...++++. +.+..|.=.-.+++
T Consensus 80 iG~GyY~----~~~P~vI~rnile--~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT------Gm~VANASm~DeaT 147 (450)
T COG0403 80 IGAGYYD----TYTPPVILRNILE--NPEWYTAYTPYQPEISQGRLEALFEFQTLVADLT------GLDVANASMLDEAT 147 (450)
T ss_pred ccCcccC----CcCcHHHHHHhhc--CccccccCCCCchhhhhHHHHHHHHHHHHHHHHh------CCCcccchhhhhHH
Confidence 4555532 3456666544433 122455677743 11 12334445554 34444555555555
Q ss_pred HHHHHHHHHh---cCCCCeEEEeCCCCcchHHHHHhc----CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCC
Q 019298 111 QAIDVAMALL---SRPGANILLPRPGFPIYELSAAFR----HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183 (343)
Q Consensus 111 ~al~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~ 183 (343)
.+=+.++.+. ..+..+++++.-+|+.+....+.+ |.+++.++.+ |++.+++....++-.+++..|+
T Consensus 148 AaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~~~~~~gv~vQyP~ 220 (450)
T COG0403 148 AAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESADDGDVFGVLVQYPN 220 (450)
T ss_pred HHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhccccCeEEEEEecCC
Confidence 5555544443 234589999999999988877654 3444444332 6788888722367788888887
Q ss_pred CCcc-cccCHHHHHHHHHHHhhcCcEEEEc--cCCCccccCCCCCCcccccCCCCCEEEEccCccc---cCCCCCcEEEE
Q 019298 184 NPCG-NVYSYQHLQKLAETANKLKTLVIAD--EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR---WIVPGWRLGWF 257 (343)
Q Consensus 184 nptG-~~~~~~~l~~l~~~~~~~~~~~i~D--~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~---~~~~G~r~G~i 257 (343)
-.| .. ++++++.+.+++++.++++= -.-..+. .+...++ -.|++++..-. ++..|...||.
T Consensus 221 -~~G~~~---~d~~~l~~~~h~~~al~~v~aDplaL~LL------~pPGe~G---ADIvvG~~QrfGvPmgfGGPhag~f 287 (450)
T COG0403 221 -TFGIVE---EDLRALIEAAHSAGALVIVAADPLALGLL------KPPGEFG---ADIVVGSAQRFGVPMGFGGPHAGYF 287 (450)
T ss_pred -CCCccc---hhHHHHHHHHhhcCCEEEEEechhHhhcc------CCccccC---CceEEecCcccCCCcCCCCcceeee
Confidence 455 44 77999999999999877652 2211111 1112222 33777775543 23356678887
Q ss_pred EEeCCCCCC--------------CchHHHHHHh----hh---hccccCcch---HHHHHHHhccchhhHHHHHHHHHHHH
Q 019298 258 VTTDPCGMF--------------RKPKVVERMK----KY---FDILGDPAT---FIQVCIMYGCLSTIMQIMIHGNFLEN 313 (343)
Q Consensus 258 ~~~~~~~~~--------------~~~~~~~~l~----~~---~~~~~~~~~---~~~~a~~~~~l~~~~~~l~~~~~~~~ 313 (343)
.+.+.- .+ .++.+.-.|+ +. +..+.-+.. .+.++..++.+.-+..+.+..++..+
T Consensus 288 A~~~~~-~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~ 366 (450)
T COG0403 288 AVKDEF-KRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHR 366 (450)
T ss_pred eEhHhH-hhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 775421 00 1222222221 11 111111111 11222223333333444447888888
Q ss_pred HHHHHHHhhcCCC-Ccee
Q 019298 314 FAGSCVPSYKLIP-ELIN 330 (343)
Q Consensus 314 ~~~~~~~~L~~~~-g~~~ 330 (343)
...++.+.|.+.. |+.+
T Consensus 367 ~a~~la~~L~~~~~g~~~ 384 (450)
T COG0403 367 LAAYLAAGLKEIGAGVEL 384 (450)
T ss_pred HHHHHHHHHhhcCCceEe
Confidence 8999999999642 4554
No 388
>PLN02672 methionine S-methyltransferase
Probab=97.54 E-value=0.0046 Score=63.61 Aligned_cols=217 Identities=17% Similarity=0.150 Sum_probs=137.3
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc------CCCCeEEEe
Q 019298 57 ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS------RPGANILLP 130 (343)
Q Consensus 57 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~------~~gd~vl~~ 130 (343)
....+...+.+..+.-|.++.|...+|..||.|++..+++++.+++|++.++-..+|..+++.+. +.+.+..++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1082)
T PLN02672 406 FLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP 485 (1082)
T ss_pred HHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC
Confidence 35666777777777789999999999999999999999999999999999999999988887752 333222222
Q ss_pred CCCCcchHHHHHhcC--------ceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHH
Q 019298 131 RPGFPIYELSAAFRH--------IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAET 201 (343)
Q Consensus 131 ~p~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 201 (343)
..|.......| ..+..++. +. .-+.+.+.++. ++++++..-... -..+-...+.|.+.
T Consensus 486 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 552 (1082)
T PLN02672 486 ----KKWLTSLAIENATSDSKSDDVITVIEA-PR-----QSDLVIELIKKLKPQVVVTGMADF---EMRTSTAFEHLLNV 552 (1082)
T ss_pred ----HHHHhHhhhhcccccCccCCeEEEEeC-CC-----cchHHHHHHHhCCCeEEEEeccch---hhhhHHHHHHHHHH
Confidence 12222222222 22222221 11 12344445544 455555433332 22233678999999
Q ss_pred HhhcCcEEEEccCCCc-cccCCCCCCcccccC---CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh
Q 019298 202 ANKLKTLVIADEVYGH-LVFGDKPFVPMGVFG---STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277 (343)
Q Consensus 202 ~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~---~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~ 277 (343)
+++.|..++.|..-.. +.........+..+. ...+..++.++-|.--.+.+-+++++.-+ ..+.+.+.+
T Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 625 (1082)
T PLN02672 553 TAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISEN-------EAVLKALSK 625 (1082)
T ss_pred HHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCc-------HHHHHHHHH
Confidence 9999999999987543 221111111111111 11255677789999777999999998632 457777777
Q ss_pred hhcc-ccCcchHHHHHH
Q 019298 278 YFDI-LGDPATFIQVCI 293 (343)
Q Consensus 278 ~~~~-~~~~~~~~~~a~ 293 (343)
.... .++...++|...
T Consensus 626 ~~~~~~~~~~~~~~~~~ 642 (1082)
T PLN02672 626 TGEVLEGRTAIISQFYY 642 (1082)
T ss_pred HHHhhccchHHHHHHHH
Confidence 6543 456666777554
No 389
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.19 E-value=0.12 Score=52.66 Aligned_cols=187 Identities=18% Similarity=0.196 Sum_probs=97.8
Q ss_pred EeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC-----CC----HHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 39 SLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA-----GL----PLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 39 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~-----g~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
-++.|..+ .-.|..+.+.+.+ +...+..|.|.+ |. -++...++++. +.+..|.-+-.++
T Consensus 83 fiG~G~y~----~~~P~vi~~~i~~--~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt------Gm~vaNASl~D~a 150 (954)
T PRK12566 83 LIGMGYHG----TVTPTVILRNVLE--NPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT------GLDLANASLLDEA 150 (954)
T ss_pred cccccccC----CcCcHHHHHHHHh--CchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh------Cchhhhhhhccch
Confidence 34555522 3345555454433 122355677743 21 12444455554 3343344444444
Q ss_pred H---HHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc----CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298 110 T---QAIDVAMALLSRPGANILLPRPGFPIYELSAAFR----HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182 (343)
Q Consensus 110 ~---~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p 182 (343)
+ +|+.++.+.-.....+|++++-.|+.+....+.+ |.+++. +++++.+.+++..+++.+|
T Consensus 151 tA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~~~~v~vq~P 217 (954)
T PRK12566 151 TAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHAVFGALLQYP 217 (954)
T ss_pred hHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCCEEEEEEECC
Confidence 4 4444433322222468999999998877655543 444442 3334444446667777788
Q ss_pred CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEcc---CccccCCCCCcEEEEEE
Q 019298 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS---LSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S---~sK~~~~~G~r~G~i~~ 259 (343)
+ -.|.+ ++++++.++++++|.++|+ .+-- +..+- ..+...+ +-.|++++ |.=-++..|.-.||+.+
T Consensus 218 ~-~~G~i---~d~~~i~~~~h~~gal~~~-~~d~-laL~l--l~~Pge~---GADI~vG~~Q~fGvp~~~GGP~ag~~a~ 286 (954)
T PRK12566 218 D-THGEI---RDLRPLIDQLHGQQALACV-AADL-LSLLV--LTPPGEL---GADVVLGSTQRFGVPMGYGGPHAAYFAC 286 (954)
T ss_pred C-CceEE---ccHHHHHHHHHHcCCEEEE-EeCH-HHHhC--CCChhhc---CCcEEeeCCCcCCCCCCCCCCCeeeeee
Confidence 6 57888 7799999999999988653 2211 11110 0111222 23366663 23333345566788777
Q ss_pred eC
Q 019298 260 TD 261 (343)
Q Consensus 260 ~~ 261 (343)
.+
T Consensus 287 ~~ 288 (954)
T PRK12566 287 RD 288 (954)
T ss_pred hH
Confidence 54
No 390
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.09 E-value=0.049 Score=48.61 Aligned_cols=252 Identities=13% Similarity=0.064 Sum_probs=124.5
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-----C-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-----P-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-----~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 108 (343)
++..||+.|- -..++++++..++.+.+-.-.+++ . ..-...+.+...+-++..++++-+.+=+++-.|
T Consensus 4 ~~~~nFsaGP------a~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGG 77 (365)
T COG1932 4 PRVYNFSAGP------AALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGG 77 (365)
T ss_pred CCCCCCCCCc------ccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCc
Confidence 4567888884 234566655555554431110000 0 111122333333333333444433333445566
Q ss_pred hHHHHHHHHHHhcCCCCeEEEeCCCCcchH-HHHHhcCceeEEeecC-CCC--CCCCCHHHHHhhhcCCceEEEEeCCCC
Q 019298 109 CTQAIDVAMALLSRPGANILLPRPGFPIYE-LSAAFRHIEVRHFDLL-PDK--GWEVDLDDIESLADQNTVALVIINPGN 184 (343)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~-~~~~~~g~~~~~~~~~-~~~--~~~~d~~~l~~~~~~~~~~i~~~~p~n 184 (343)
++.....+...|.....+-.+..-.|.... .-++..+......... .+. +.-++++... +.++...|.+|.-..
T Consensus 78 at~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeT 155 (365)
T COG1932 78 ATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNET 155 (365)
T ss_pred cHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCc
Confidence 799999999988765432123333443321 2233334212211111 111 2223444333 222222355555455
Q ss_pred CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCC
Q 019298 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264 (343)
Q Consensus 185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~ 264 (343)
-+|+-++. ...+. .+.++|+|.....+. ....+..++ ++..|.-|.+|..| ++.++.+.
T Consensus 156 i~Gv~v~~--~p~~~-----~~~~~v~D~SS~ils----r~iDvsk~d-----viyagaQKnlGpaG--ltvvIvr~--- 214 (365)
T COG1932 156 ISGVEVPE--LPDIG-----SDGLLVADASSAILS----RPIDVSKYD-----VIYAGAQKNLGPAG--LTVVIVRP--- 214 (365)
T ss_pred ccceEccC--CCCCC-----CCceEEEecccHHhc----CCCChhHcc-----eEEEehhhccCccc--eEEEEEcH---
Confidence 77777652 11111 137899998876643 222222222 67778999999999 78888753
Q ss_pred CCCchHHHHHHhhh-------------hcccc-CcchHHHHHHHhccchhhHHHHH-------HHHHHHHHHHHHHHhhc
Q 019298 265 MFRKPKVVERMKKY-------------FDILG-DPATFIQVCIMYGCLSTIMQIMI-------HGNFLENFAGSCVPSYK 323 (343)
Q Consensus 265 ~~~~~~~~~~l~~~-------------~~~~~-~~~~~~~~a~~~~~l~~~~~~l~-------~~~~~~~~~~~~~~~L~ 323 (343)
+++++.+.. .+... .|+.++.... .-. -+|+. ..++-+++.+.+.+.+.
T Consensus 215 -----~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~-~lv----~~Wlk~~GGl~~~~~rn~~ka~~LY~~id 284 (365)
T COG1932 215 -----DLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLL-GLV----FKWLKSQGGLEALEARNQAKAQLLYDWID 284 (365)
T ss_pred -----HHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHH-HHH----HHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 455555442 11223 3333433333 111 45555 67777788888888887
Q ss_pred CC
Q 019298 324 LI 325 (343)
Q Consensus 324 ~~ 325 (343)
+.
T Consensus 285 ~s 286 (365)
T COG1932 285 KS 286 (365)
T ss_pred hC
Confidence 65
No 391
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=96.96 E-value=0.016 Score=51.34 Aligned_cols=76 Identities=24% Similarity=0.199 Sum_probs=49.3
Q ss_pred CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCC-CCcccccCCCCCEEEEccCccccCC
Q 019298 173 NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPMGVFGSTVPILTLGSLSKRWIV 249 (343)
Q Consensus 173 ~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~ 249 (343)
.+.+.++..| +.-.|.- .|++..+.|.+++++|++.+|+||++.+..-.|.- .+.-..++.-.. +-+|||-|-.
T Consensus 270 ~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD---~vTFSKK~q~ 346 (484)
T KOG1405|consen 270 KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPD---VVTFSKKFQT 346 (484)
T ss_pred CCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCcc---ceehhhhhhc
Confidence 3556677777 5555554 68899999999999999999999999875444321 000111111112 2368999755
Q ss_pred CC
Q 019298 250 PG 251 (343)
Q Consensus 250 ~G 251 (343)
.|
T Consensus 347 gG 348 (484)
T KOG1405|consen 347 GG 348 (484)
T ss_pred Cc
Confidence 54
No 392
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.55 E-value=0.0083 Score=50.89 Aligned_cols=174 Identities=17% Similarity=0.199 Sum_probs=94.4
Q ss_pred CCCCCCCcEEEecChHHHHHHHHHHhc--CCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhh
Q 019298 95 PYKLTPNDVFVTSGCTQAIDVAMALLS--RPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLA 170 (343)
Q Consensus 95 ~~~~~~~~i~~~~g~~~al~~~~~~l~--~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~ 170 (343)
|.+.....+++--.+-..+.+.+.++. +|. ..|+-+.-.--......-..|.+.+.++-..+ +...-|++.+++.+
T Consensus 71 glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~i 150 (432)
T KOG3843|consen 71 GLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAII 150 (432)
T ss_pred hhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHH
Confidence 444455555544333334555555553 343 33443444444444555667888776653332 33334677777777
Q ss_pred cC-Cce-EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEEccCcccc
Q 019298 171 DQ-NTV-ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRW 247 (343)
Q Consensus 171 ~~-~~~-~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~ 247 (343)
.+ +.. .+++.+... .=..-+++.+++|+.+|..|++.-|+..+|+.-. ++....+.....-++ ..++.|+.|.|
T Consensus 151 ee~g~dcilci~stts-cfapr~pd~leaiaaica~~diphivnnayglqs--ee~i~~iaa~~~~grida~vqsldknf 227 (432)
T KOG3843|consen 151 EELGEDCILCIHSTTS-CFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQS--EECIHKIAAAAECGRIDAFVQSLDKNF 227 (432)
T ss_pred HHhCCceEEEEeeccc-ccCCCCCchHHHHHHHHHccCchhhhccccccch--HHHHHHHHHHhhhccHHHHHHHhhhcc
Confidence 55 333 333322211 1111234789999999999999999999998632 111112222222233 26789999999
Q ss_pred CCCCCcEEE-EEEeCCCCCCCchHHHHHHhhhhc
Q 019298 248 IVPGWRLGW-FVTTDPCGMFRKPKVVERMKKYFD 280 (343)
Q Consensus 248 ~~~G~r~G~-i~~~~~~~~~~~~~~~~~l~~~~~ 280 (343)
..| +|- +++.= +..+++.+.+...
T Consensus 228 ~vp---vggaiia~f------k~n~iq~iak~yp 252 (432)
T KOG3843|consen 228 MVP---VGGAIIAAF------KDNFIQEIAKMYP 252 (432)
T ss_pred eee---cchhHhhHh------HHHHHHHHHHhCC
Confidence 876 343 33311 2346666666654
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.27 E-value=0.14 Score=49.23 Aligned_cols=130 Identities=16% Similarity=0.184 Sum_probs=89.1
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEE--ecChH---HHHHHHHHHhc-CCC----CeEEEeCCCCcchHHHHHhcCc
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFV--TSGCT---QAIDVAMALLS-RPG----ANILLPRPGFPIYELSAAFRHI 146 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~---~al~~~~~~l~-~~g----d~vl~~~p~~~~~~~~~~~~g~ 146 (343)
+|+.++...+..++-... .-|++.+ .+|++ .++. ++++.. ..| ..+++|...|+.....+.++|.
T Consensus 578 qGY~~lf~~Le~~Lc~iT----G~D~~s~QPNsGA~GEYaGL~-~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm 652 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEIT----GFDSFSLQPNSGAQGEYAGLR-VIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM 652 (1001)
T ss_pred hhHHHHHHHHHHHhheee----cccceeecCCCCcccchhhHH-HHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence 466677777777664322 3345543 44443 3443 344442 233 4688999999999999999999
Q ss_pred eeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC
Q 019298 147 EVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216 (343)
Q Consensus 147 ~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~ 216 (343)
+++.+..+. +..+|..+|++.... +-.++.+.-|+.- |+. .+.+++++++..+||.-+..|.+--
T Consensus 653 kvvpV~~~~--~G~id~~dLk~kaekh~~~Laa~MvTYPST~-Gvf--E~~i~d~cd~iHehGGQVYlDGANM 720 (1001)
T KOG2040|consen 653 KVVPVGCDA--NGNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVF--EEGIDDICDIIHEHGGQVYLDGANM 720 (1001)
T ss_pred EEEEeeccC--CCCccHHHHHHHHHHhhhhhheeEEeccccc-ccc--cccHHHHHHHHHhcCCEEEecCCCc
Confidence 999998764 456999999886654 3345666666542 333 2678999999999999999997754
No 394
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=92.06 E-value=4.2 Score=35.84 Aligned_cols=193 Identities=15% Similarity=0.116 Sum_probs=116.8
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhc-------CCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEE
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLS-------EKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVF 104 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~ 104 (343)
..+.|-|+.+. ++ .|...+..+...++. ++..+--| ..+......-++... +...++|.
T Consensus 65 d~~~iYlcGNS------LGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~Eva 132 (465)
T KOG3846|consen 65 DKPVIYLCGNS------LGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVA 132 (465)
T ss_pred CCCeEEEeccc------cccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhh
Confidence 44555555544 33 455556666665543 22222222 224455566666666 56788999
Q ss_pred EecChHHHHHHHHHHhcCCC---CeEEEeCCCCcc----hHHHHHhcCceeEE--eecCCC-CCCCCCHHHHHhhhcC--
Q 019298 105 VTSGCTQAIDVAMALLSRPG---ANILLPRPGFPI----YELSAAFRHIEVRH--FDLLPD-KGWEVDLDDIESLADQ-- 172 (343)
Q Consensus 105 ~~~g~~~al~~~~~~l~~~g---d~vl~~~p~~~~----~~~~~~~~g~~~~~--~~~~~~-~~~~~d~~~l~~~~~~-- 172 (343)
+.++-+..+..++.++.+|- -+|++..-.|++ +...++..|..+.. +.+.+. +...+..+++.+.+..
T Consensus 133 vmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkng 212 (465)
T KOG3846|consen 133 VMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNG 212 (465)
T ss_pred hHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcC
Confidence 99999999999999998764 367777666543 45566666765432 222332 2334667777776643
Q ss_pred -CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC
Q 019298 173 -NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248 (343)
Q Consensus 173 -~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 248 (343)
...+++++..+.-||+.++. .+|-..-...|.++=.|-+++. +.-+..+ ...+-.+.|+.--|-..
T Consensus 213 DeiA~v~fSGvqyYTGQ~Fdi---~aIT~Agq~kgc~VGfDLAHAv----gNVpL~L---HdWgVDFACWCSYKYln 279 (465)
T KOG3846|consen 213 DEIALVCFSGVQYYTGQYFDI---GAITFAGQFKGCLVGFDLAHAV----GNVPLQL---HDWGVDFACWCSYKYLN 279 (465)
T ss_pred CeEEEEEeecceeecccccch---hhhhhcccCCCcEechhhhhhh----cCCceEE---eecCCceEEEeeecccc
Confidence 34455666779999999765 4444444466888888988875 2222222 22233488888777743
No 395
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=85.81 E-value=14 Score=31.04 Aligned_cols=151 Identities=17% Similarity=0.183 Sum_probs=85.9
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeE--------------EEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHH
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANI--------------LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE 167 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~v--------------l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 167 (343)
-+.+-+|+.++...+..++ +.|-.| -...|........++..|..+......-+ ..-..++|.
T Consensus 3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~ 79 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK 79 (223)
T ss_pred EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence 3567889998887776665 344221 11122222234466777888777765431 223467777
Q ss_pred hhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc
Q 019298 168 SLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR 246 (343)
Q Consensus 168 ~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 246 (343)
++++. +...|+ +|.+++..+...+-++|++.|+.+ |.+++--++. .-+...-..+--+.|-+.||.
T Consensus 80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~-----~~PLWg~d~~-ell~e~~~~Gf~~~Iv~Vsa~ 146 (223)
T COG2102 80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKV-----YAPLWGRDPE-ELLEEMVEAGFEAIIVAVSAE 146 (223)
T ss_pred HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEE-----eecccCCCHH-HHHHHHHHcCCeEEEEEEecc
Confidence 77654 444555 799999999999999999998874 4455422211 111111111111444456666
Q ss_pred cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278 (343)
Q Consensus 247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~ 278 (343)
+++..=+|.-+. .+.++.++..
T Consensus 147 -gL~~~~lGr~i~---------~~~~e~l~~l 168 (223)
T COG2102 147 -GLDESWLGRRID---------REFLEELKSL 168 (223)
T ss_pred -CCChHHhCCccC---------HHHHHHHHHH
Confidence 666533444332 3566666665
No 396
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=85.81 E-value=24 Score=30.99 Aligned_cols=196 Identities=13% Similarity=0.044 Sum_probs=97.2
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC-------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~ 106 (343)
+..++||+-|- .-.+.+.+.++-++.+.-. ..+.- + .....+.+.....+.+.++++-.-+-+++-
T Consensus 5 ~~~vvnFaaGP-----Aklp~~VL~e~qkdl~n~~g~GisV~EmSHR-s-k~f~kii~~tes~lreLlniPdn~~vlf~Q 77 (370)
T KOG2790|consen 5 PERVVNFAAGP-----AKLPESVLLEAQKDLLNFNGSGISVMEMSHR-S-KDFAKIINDTESLLRELLNIPDNYKVLFLQ 77 (370)
T ss_pred ccceeecCCCc-----ccCCHHHHHHHHHHhhccCCCcceEEEeccc-c-hhHHHHHHHHHHHHHHHHcCCCceeEEEEe
Confidence 67889999884 2223444455444444311 01111 1 112233333333333333433333334556
Q ss_pred cChHHHHHHHHHHhc--CCC---CeEEEeCCCCcchHHHHHhcCce-eEEeecCCCC-CCCCCHHHHHhhhcCCceEEEE
Q 019298 107 SGCTQAIDVAMALLS--RPG---ANILLPRPGFPIYELSAAFRHIE-VRHFDLLPDK-GWEVDLDDIESLADQNTVALVI 179 (343)
Q Consensus 107 ~g~~~al~~~~~~l~--~~g---d~vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~i~~ 179 (343)
.|+++-+..+...|. +.| |.|+.-+++--.+... +.+|.. .+..+..+.. +--+|.+.++. +.+.+.+++
T Consensus 78 GGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EA-kk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyy 154 (370)
T KOG2790|consen 78 GGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEA-KKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYY 154 (370)
T ss_pred CCCcccccccchhhhccccCCccceEEeccccHHHHHHH-HhhCCceEEeccccccccCcCCChhhccc--CCCccEEEE
Confidence 777877777776665 444 5666555554444433 334433 3333332221 12245444443 223446667
Q ss_pred eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
|.--.-.|+-++.-. +-.-++.+++.|...-.+. .+..+. ..-+++.+..|..|.+|..+
T Consensus 155 CaNETVHGVEf~~~P------~~~~~~~vlVaDmSSnflS----rpvDvs-----k~gvi~aGAQKN~G~aG~Tv 214 (370)
T KOG2790|consen 155 CANETVHGVEFDFIP------VNDPKGAVLVADMSSNFLS----RPVDVS-----KFGVIFAGAQKNVGPAGVTV 214 (370)
T ss_pred ecCceeeceecCCCC------CCCCCCceEEEecccchhc----CCccch-----hcceEEeccccccCccccEE
Confidence 654445566554322 1124578888888765432 122222 22377888999999998543
No 397
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=83.00 E-value=14 Score=31.18 Aligned_cols=85 Identities=14% Similarity=0.047 Sum_probs=50.1
Q ss_pred HHHHhcCCCC-eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 116 AMALLSRPGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 116 ~~~~l~~~gd-~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
+++.|...+- ..++.++.-......++..|.+++..+++ |.+.|.++++ +...++++.+..... ..+.
T Consensus 14 v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~-g~d~v~~~~~~~~~~---~~~~ 82 (233)
T PF05368_consen 14 VVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALK-GVDAVFSVTPPSHPS---ELEQ 82 (233)
T ss_dssp HHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHT-TCSEEEEESSCSCCC---HHHH
T ss_pred HHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHc-CCceEEeecCcchhh---hhhh
Confidence 4445554553 44455555333344456678887755432 6899999888 455566666643322 2256
Q ss_pred HHHHHHHHhhcCcEEEE
Q 019298 195 LQKLAETANKLKTLVIA 211 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~ 211 (343)
-..+++.|++.|+-.++
T Consensus 83 ~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 83 QKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHHHHT-SEEE
T ss_pred hhhHHHhhhccccceEE
Confidence 78899999998876665
No 398
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=82.85 E-value=21 Score=31.55 Aligned_cols=101 Identities=14% Similarity=0.091 Sum_probs=58.9
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh---cCceeEEeecCCCCCCCCCHHHHHhhhcC--
Q 019298 98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---RHIEVRHFDLLPDKGWEVDLDDIESLADQ-- 172 (343)
Q Consensus 98 ~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-- 172 (343)
+..+-|++|.|++..=..+..-+.+.|.++++.+-.-.+.....+. .| +++.+..+-.+. -++..+.+.+++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~--eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDR--EEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCH--HHHHHHHHHHHHhc
Confidence 4556677777777777777777888888877666555444443333 24 566665543221 123333334433
Q ss_pred CceEEEEeCCC---CCcccccCHHHHHHHHHH
Q 019298 173 NTVALVIINPG---NPCGNVYSYQHLQKLAET 201 (343)
Q Consensus 173 ~~~~i~~~~p~---nptG~~~~~~~l~~l~~~ 201 (343)
+..-|+++|.. +-.....+.+++++..++
T Consensus 113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred CCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 45567777773 334444677888886554
No 399
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=78.58 E-value=15 Score=33.00 Aligned_cols=107 Identities=20% Similarity=0.190 Sum_probs=70.5
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEe-CCCCcc-----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEe
Q 019298 107 SGCTQAIDVAMALLSRPGANILLP-RPGFPI-----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180 (343)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vl~~-~p~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~ 180 (343)
+|=|..|.-+.+.+.+.|-.|++. .-+|.. ....++..|.+++.-... .+--.+-.|+++.+...+...+++-
T Consensus 150 ~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G-~DpAaVafDAi~~Akar~~DvvliD 228 (340)
T COG0552 150 VGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEG-ADPAAVAFDAIQAAKARGIDVVLID 228 (340)
T ss_pred CchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCC-CCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 344888888888888888777665 444422 222344556666653211 1111233667777777778888876
Q ss_pred CC---CCCcccccCHHHHHHHHHHHhhcC------cEEEEccCCCc
Q 019298 181 NP---GNPCGNVYSYQHLQKLAETANKLK------TLVIADEVYGH 217 (343)
Q Consensus 181 ~p---~nptG~~~~~~~l~~l~~~~~~~~------~~~i~D~ay~~ 217 (343)
+. ||-+... ++|++|.+++++.. +++++|..-+-
T Consensus 229 TAGRLhnk~nLM---~EL~KI~rV~~k~~~~ap~e~llvlDAttGq 271 (340)
T COG0552 229 TAGRLHNKKNLM---DELKKIVRVIKKDDPDAPHEILLVLDATTGQ 271 (340)
T ss_pred CcccccCchhHH---HHHHHHHHHhccccCCCCceEEEEEEcccCh
Confidence 66 7888877 99999999999875 66676877553
No 400
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=77.07 E-value=41 Score=30.03 Aligned_cols=58 Identities=17% Similarity=0.188 Sum_probs=38.7
Q ss_pred CCCCHHHHHhhh---cC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcc
Q 019298 159 WEVDLDDIESLA---DQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL 218 (343)
Q Consensus 159 ~~~d~~~l~~~~---~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~ 218 (343)
..++.+++++.+ .. ....+++.+.+=|.|. +.+...+|+++|++.+..+++|..-..+
T Consensus 109 p~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~--~~d~y~~li~~~~~~g~~vilD~Sg~~L 171 (310)
T COG1105 109 PEISEAELEQFLEQLKALLESDDIVVLSGSLPPGV--PPDAYAELIRILRQQGAKVILDTSGEAL 171 (310)
T ss_pred CCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCC--CHHHHHHHHHHHHhcCCeEEEECChHHH
Confidence 345555555433 22 2333455556667764 4578899999999999999999876655
No 401
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=77.01 E-value=42 Score=28.00 Aligned_cols=96 Identities=22% Similarity=0.210 Sum_probs=55.7
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298 98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (343)
Q Consensus 98 ~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 177 (343)
+....|++..|+..|...+ +.|++.|-.|.+.+|....-.......| ++..+.-. ...+.+. + ..+
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~~------~~~~dl~-----~-~~l 72 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQG-GITWLARC------FDADILE-----G-AFL 72 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeCC------CCHHHhC-----C-cEE
Confidence 3456888888888888775 5666777778777777643222222223 34333221 1222221 2 344
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEE-EEccC
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLV-IADEV 214 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~-i~D~a 214 (343)
++..++++ +.-.++.+.|++.++++ ++|+.
T Consensus 73 Vi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 73 VIAATDDE-------ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred EEECCCCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 55555554 34568899999998877 34543
No 402
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=76.61 E-value=38 Score=27.24 Aligned_cols=84 Identities=10% Similarity=0.020 Sum_probs=55.4
Q ss_pred hcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeC-CCCCcccccCHHHHHHH
Q 019298 120 LSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKL 198 (343)
Q Consensus 120 l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~-p~nptG~~~~~~~l~~l 198 (343)
+...+.-++...|-+..+.......|++...+-......-.-.+...|++++.+....|++. |+. ++.+++++|
T Consensus 56 Ls~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL~WLp~~-----l~~~~lRRL 130 (168)
T TIGR00623 56 LGQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVIGWLTDE-----LTEEEHAKL 130 (168)
T ss_pred hcccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEEecCCcc-----CCHHHHHHH
Confidence 34556667777777777788888899886655221111111236788899998888888877 433 455778888
Q ss_pred HHHHhhcCcE
Q 019298 199 AETANKLKTL 208 (343)
Q Consensus 199 ~~~~~~~~~~ 208 (343)
---++.-+.+
T Consensus 131 qlAA~~G~al 140 (168)
T TIGR00623 131 VRAAEEGNAM 140 (168)
T ss_pred HHHHHhCCCe
Confidence 7777665554
No 403
>PRK10595 SOS cell division inhibitor; Provisional
Probab=74.59 E-value=43 Score=26.87 Aligned_cols=89 Identities=9% Similarity=0.022 Sum_probs=57.1
Q ss_pred HHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHH
Q 019298 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195 (343)
Q Consensus 116 ~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l 195 (343)
+++.+...+.-|+...|-+..+.......|++...+-.....+-.-.+..+|++++.+....+++-..+ .++.+++
T Consensus 48 ~L~~l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~----~l~~~~~ 123 (164)
T PRK10595 48 LLQQLGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPD----ELTEEEH 123 (164)
T ss_pred HHHHHhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcc----cCCHHHH
Confidence 333344556678788888888888889999876554322111111135777888888877777776421 2345788
Q ss_pred HHHHHHHhhcCcE
Q 019298 196 QKLAETANKLKTL 208 (343)
Q Consensus 196 ~~l~~~~~~~~~~ 208 (343)
++|--.+++-+.+
T Consensus 124 RRLQlAAe~g~~l 136 (164)
T PRK10595 124 ARLVDAAQEGNAM 136 (164)
T ss_pred HHHHHHHHhCCCE
Confidence 8887777766554
No 404
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=71.14 E-value=75 Score=28.93 Aligned_cols=107 Identities=13% Similarity=0.058 Sum_probs=59.2
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeE--EEeCCCCc------chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANI--LLPRPGFP------IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~v--l~~~p~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
.|-++..|||-++..++......-|..+ +..++.+. .....+...|.+...+.+ |.+.+....+
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~~ 131 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQR 131 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHHH
Confidence 6678888999887776533322224333 45566664 234455667877766644 3444433222
Q ss_pred CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcccc
Q 019298 172 QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF 220 (343)
Q Consensus 172 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~ 220 (343)
.... +..+|...+. ......+.++|+++|+.+|+......-.+
T Consensus 132 ~~~~-----~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~~dE~f 174 (343)
T TIGR03573 132 AYFK-----KVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGENIAEEY 174 (343)
T ss_pred HHHh-----ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCCHHHhc
Confidence 1111 2223332221 13456778889999999998765555333
No 405
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=71.13 E-value=10 Score=34.38 Aligned_cols=70 Identities=19% Similarity=0.371 Sum_probs=45.2
Q ss_pred HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
+.....++++....+..+.+|.+.++.+-+.-.... ......+.|-.+|++++++|++.|+++++-||--
T Consensus 25 d~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga----~~~~~~~~~~~YT~~di~elv~yA~~rgI~vIPE 94 (329)
T cd06568 25 DLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGG----STEVGGGPGGYYTQEDYKDIVAYAAERHITVVPE 94 (329)
T ss_pred HHHHHhCCcEEEEEeecCCcceeeecCccccccccc----ccccCCCCCCcCCHHHHHHHHHHHHHcCCEEEEe
Confidence 344556777777777666667666555433211111 0122345677899999999999999999877643
No 406
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=70.50 E-value=64 Score=27.36 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=61.1
Q ss_pred EEEecChHHHHHHHHHHhcCCCCeEEEe--CC-----------CCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhh
Q 019298 103 VFVTSGCTQAIDVAMALLSRPGANILLP--RP-----------GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL 169 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~~~gd~vl~~--~p-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 169 (343)
++..+|+-++...+.+++.+ .+.+.+. .| ...-....++..|+....+....+ ..-..+++.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~--~e~~~~~l~~~ 80 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE--EEKEVEDLAGQ 80 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc--hhHHHHHHHHH
Confidence 45678888888877776654 4433222 11 112234567778888776654321 11224555555
Q ss_pred hcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEE
Q 019298 170 ADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209 (343)
Q Consensus 170 ~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~ 209 (343)
+++ +...++ +|.+.+..+...+-++|.+.|+..
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~ 114 (222)
T TIGR00289 81 LGELDVEALC-------IGAIESNYQKSRIDKVCRELGLKS 114 (222)
T ss_pred HHHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEE
Confidence 543 455555 899999999999999999998864
No 407
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=70.02 E-value=11 Score=33.66 Aligned_cols=69 Identities=26% Similarity=0.410 Sum_probs=43.9
Q ss_pred HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
......+.++....+..+.+|.+..+.+-+.-..... .+ ..+.|-.+|++++++|++.|+++|+-||-.
T Consensus 23 d~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~----~~-~~~~~~~yT~~di~elv~yA~~rgI~viPE 91 (303)
T cd02742 23 DVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ----IN-PRSPGGFYTYAQLKDIIEYAAARGIEVIPE 91 (303)
T ss_pred HHHHHhCCcEEEEeeecCCCceEeeCccchhhhhccc----cc-CCCCCCeECHHHHHHHHHHHHHcCCEEEEe
Confidence 3445567777777776666666665544433221111 11 124456899999999999999999877643
No 408
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=69.03 E-value=71 Score=27.10 Aligned_cols=97 Identities=16% Similarity=0.204 Sum_probs=62.5
Q ss_pred EEEecChHHHHHHHHHHhcCCCCeEEE----eCC--CC-------cchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhh
Q 019298 103 VFVTSGCTQAIDVAMALLSRPGANILL----PRP--GF-------PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL 169 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~~~gd~vl~----~~p--~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 169 (343)
++.-+|+-++...+.+++.+ -+.+.+ +.. .| .-....++..|+....++.... ..-..+.+.++
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~--~e~~~e~l~~~ 80 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT--EEDEVEELKGI 80 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC--ccHHHHHHHHH
Confidence 45678999988888887765 443332 111 11 1234566777888776554322 11235666666
Q ss_pred hcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEE
Q 019298 170 ADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209 (343)
Q Consensus 170 ~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~ 209 (343)
+++ +...++ +|.+.+..+...+-++|.+.|+..
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~ 114 (223)
T TIGR00290 81 LHTLDVEAVV-------FGAIYSEYQKTRIERVCRELGLKS 114 (223)
T ss_pred HHHcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCEE
Confidence 654 444555 899999999999999999998874
No 409
>PRK08265 short chain dehydrogenase; Provisional
Probab=68.92 E-value=75 Score=27.28 Aligned_cols=94 Identities=18% Similarity=-0.016 Sum_probs=46.8
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 174 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-..........+.++..+..+.. |.+.+++.+.. +.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDIT-----DDAAIERAVATVVARFGRV 81 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCC-----CHHHHHHHHHHHHHHhCCC
Confidence 34555555454445555667778888877654433334444444555555554432 34555444331 33
Q ss_pred eEEEEeCCC--CCcccccCHHHHHHHHH
Q 019298 175 VALVIINPG--NPCGNVYSYQHLQKLAE 200 (343)
Q Consensus 175 ~~i~~~~p~--nptG~~~~~~~l~~l~~ 200 (343)
..++ ++.. .+.+...+.+++++..+
T Consensus 82 d~lv-~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 82 DILV-NLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred CEEE-ECCCCCCCCcCcCCHHHHHHHHh
Confidence 4444 4432 22233445566655443
No 410
>PLN02591 tryptophan synthase
Probab=68.06 E-value=72 Score=27.63 Aligned_cols=158 Identities=18% Similarity=0.185 Sum_probs=91.0
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec-C--h
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS-G--C 109 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~-g--~ 109 (343)
.+...|-+++.-.++ ..--|.+.++-.+++.++. ....+.+.+.++- +... + | =++.+- + -
T Consensus 28 ~Gad~iElGiPfSDP---~aDGpvIq~a~~rAL~~G~--------~~~~~~~~~~~~r-~~~~--~-p-~ilm~Y~N~i~ 91 (250)
T PLN02591 28 CGADVIELGVPYSDP---LADGPVIQAAATRALEKGT--------TLDSVISMLKEVA-PQLS--C-P-IVLFTYYNPIL 91 (250)
T ss_pred CCCCEEEECCCCCCC---cccCHHHHHHHHHHHHcCC--------CHHHHHHHHHHHh-cCCC--C-C-EEEEecccHHH
Confidence 377888888876442 2334788888888877532 1234444444432 1111 1 1 122221 1 1
Q ss_pred HHHHHHHHHHhcCCC-CeEEEeCCCCcc---hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCC
Q 019298 110 TQAIDVAMALLSRPG-ANILLPRPGFPI---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (343)
Q Consensus 110 ~~al~~~~~~l~~~g-d~vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~np 185 (343)
.-++...+..+.+.| |.|++++-.+.. +...++..|+..+.+-.. + .+.+.+++.....+..+++.+-..-
T Consensus 92 ~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~P--t---t~~~ri~~ia~~~~gFIY~Vs~~Gv 166 (250)
T PLN02591 92 KRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTTP--T---TPTERMKAIAEASEGFVYLVSSTGV 166 (250)
T ss_pred HhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC--C---CCHHHHHHHHHhCCCcEEEeeCCCC
Confidence 235555566665656 899999887743 445667778777665321 1 2345666665556677777666777
Q ss_pred cccccC-HHHHHHHHHHHhhc-CcEEEE
Q 019298 186 CGNVYS-YQHLQKLAETANKL-KTLVIA 211 (343)
Q Consensus 186 tG~~~~-~~~l~~l~~~~~~~-~~~~i~ 211 (343)
||.... .+++.++++.++++ ++.+++
T Consensus 167 TG~~~~~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 167 TGARASVSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred cCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence 787433 36778877777764 454443
No 411
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=67.74 E-value=53 Score=26.26 Aligned_cols=78 Identities=18% Similarity=0.123 Sum_probs=45.9
Q ss_pred HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
.+++.|.+.|-.|....-.-..... ..++++...+. .|.+.+.+++. +...++.+.+.++. ..+.
T Consensus 13 ~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~-------~d~~~~~~al~-~~d~vi~~~~~~~~----~~~~ 77 (183)
T PF13460_consen 13 ALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDL-------FDPDSVKAALK-GADAVIHAAGPPPK----DVDA 77 (183)
T ss_dssp HHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCT-------TCHHHHHHHHT-TSSEEEECCHSTTT----HHHH
T ss_pred HHHHHHHHCCCEEEEEecCchhccc---ccccccceeee-------hhhhhhhhhhh-hcchhhhhhhhhcc----cccc
Confidence 3455666666666554434332222 33444443322 46788888887 45666655544333 2577
Q ss_pred HHHHHHHHhhcCc
Q 019298 195 LQKLAETANKLKT 207 (343)
Q Consensus 195 l~~l~~~~~~~~~ 207 (343)
.+.+++.|+++++
T Consensus 78 ~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 78 AKNIIEAAKKAGV 90 (183)
T ss_dssp HHHHHHHHHHTTS
T ss_pred ccccccccccccc
Confidence 8899999988875
No 412
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=67.59 E-value=7.2 Score=38.30 Aligned_cols=44 Identities=20% Similarity=0.200 Sum_probs=35.7
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC
Q 019298 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK 223 (343)
Q Consensus 177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~ 223 (343)
+.+=.|++..|.. ++++++++-|.++|+-||+|=+|.+|.-++.
T Consensus 201 ~g~yAp~sryGtP---edfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 201 TGYYAPTSRYGTP---EDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred ceeccccccCCCH---HHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 3344566666666 9999999999999999999999999865543
No 413
>PRK04296 thymidine kinase; Provisional
Probab=66.86 E-value=36 Score=27.95 Aligned_cols=95 Identities=16% Similarity=0.159 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcc---hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCC
Q 019298 110 TQAIDVAMALLSRPGANILLPRPGFPI---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPG 183 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~ 183 (343)
+.++..+.+ +...|.+|++..|.... ....+...|..+..+.. ...+++.+.+.+ +..+|++-..
T Consensus 17 T~~l~~~~~-~~~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEa- 87 (190)
T PRK04296 17 TELLQRAYN-YEERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEA- 87 (190)
T ss_pred HHHHHHHHH-HHHcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEcc-
Confidence 445554444 44567888877664322 22233333433222111 123333333322 4566666655
Q ss_pred CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc
Q 019298 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217 (343)
Q Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~ 217 (343)
+.++.+++.++++.++..++.+|+=.--..
T Consensus 88 ----q~l~~~~v~~l~~~l~~~g~~vi~tgl~~~ 117 (190)
T PRK04296 88 ----QFLDKEQVVQLAEVLDDLGIPVICYGLDTD 117 (190)
T ss_pred ----ccCCHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 346677789999998888988887655444
No 414
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=66.00 E-value=45 Score=28.00 Aligned_cols=90 Identities=23% Similarity=0.371 Sum_probs=55.6
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCC-cchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298 98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF-PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (343)
Q Consensus 98 ~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 176 (343)
+....|++..||..|...+ +.|.+.|..|.+..|.. +.........+..... ...+.+.+.. ..+
T Consensus 10 l~~k~VlvvGgG~va~rKa-~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~--------~~~~~~~~~~-----~~l 75 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKA-RLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE--------REFDAEDLDD-----AFL 75 (210)
T ss_pred cCCCEEEEECCCHHHHHHH-HHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh--------cccChhhhcC-----ceE
Confidence 4556899999999999874 56778899999999888 4444444443322211 1123333322 233
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEE
Q 019298 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209 (343)
Q Consensus 177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~ 209 (343)
++. ..+|+ +.=+++.+.|+++++++
T Consensus 76 via-At~d~-------~ln~~i~~~a~~~~i~v 100 (210)
T COG1648 76 VIA-ATDDE-------ELNERIAKAARERRILV 100 (210)
T ss_pred EEE-eCCCH-------HHHHHHHHHHHHhCCce
Confidence 343 33333 55688999999987654
No 415
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=65.44 E-value=74 Score=26.37 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=23.5
Q ss_pred hcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 170 ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 170 ~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
.+++-.+++++. +|.. +++.+.++.++++|+.+|.
T Consensus 107 ~~~gDvli~iS~----SG~s---~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 107 GHAGDVLLAIST----RGNS---RDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred CCCCCEEEEEeC----CCCC---HHHHHHHHHHHHCCCEEEE
Confidence 333444455554 3333 7899999999999988775
No 416
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=64.58 E-value=15 Score=32.89 Aligned_cols=62 Identities=18% Similarity=0.305 Sum_probs=39.9
Q ss_pred HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
.....+++++....+.++.+|.+..+.+-+.-... ..|..++.+++++|++.|+++|+-||-
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g-----------~~~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 25 DAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKA-----------SDGLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred HHHHHhCCeEEEEEEecCCCceeecCCCccccccC-----------CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 34445567777777665556665544333221100 135679999999999999999987664
No 417
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=64.15 E-value=14 Score=33.79 Aligned_cols=65 Identities=15% Similarity=0.299 Sum_probs=43.3
Q ss_pred HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
.....+++++..+.+..+.+|.+.++.+.+.-... ....+-.++++++++|++.|+++++-||-.
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g---------a~~~~~~YT~~di~eiv~yA~~rgI~vIPE 89 (348)
T cd06562 25 DAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG---------AYSPSEVYTPEDVKEIVEYARLRGIRVIPE 89 (348)
T ss_pred HHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc---------CcCCCceECHHHHHHHHHHHHHcCCEEEEe
Confidence 34445677777777766666776655544432111 123466789999999999999999877743
No 418
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=62.55 E-value=78 Score=26.75 Aligned_cols=98 Identities=16% Similarity=0.128 Sum_probs=54.9
Q ss_pred EEEecChHHHHHHHHHHhcCCCCeEEEe-------------CCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhh
Q 019298 103 VFVTSGCTQAIDVAMALLSRPGANILLP-------------RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL 169 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~~~gd~vl~~-------------~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 169 (343)
++.-+|+-++...+.+++.+ -+.+.+. .+...-....+...|+....+++.... .-..+++.++
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~--~~~~~~l~~~ 80 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDE--EDYVEDLKEA 80 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---C--CCHHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCcc--chhhHHHHHH
Confidence 45678888888887777655 3332211 111122455778889998888775221 1235677777
Q ss_pred hcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEE
Q 019298 170 ADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (343)
Q Consensus 170 ~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i 210 (343)
+++ +...++ +|.+.+..+...+-++|.+.|+-.+
T Consensus 81 l~~~~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 81 LKELKVEAVV-------FGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HCTC--SEEE---------TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHcCCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 754 444444 7899998999999999999987643
No 419
>PLN00191 enolase
Probab=61.02 E-value=54 Score=31.18 Aligned_cols=99 Identities=7% Similarity=0.021 Sum_probs=61.5
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCCcc-hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc
Q 019298 108 GCTQAIDVAMALLSRPGANILLPRPGFPI-YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt 186 (343)
++.+++... +.|.++-+.+++.+|.... +....+.... ..+++-.++.+.-+++.+++.+..+..-++..-++.-.
T Consensus 296 s~~e~i~~~-~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~--~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iKl~qiG 372 (457)
T PLN00191 296 SGDELIDLY-KEFVSDYPIVSIEDPFDQDDWEHWAKLTSL--EDVQIVGDDLLVTNPKRVAKAIQEKACNALLLKVNQIG 372 (457)
T ss_pred CHHHHHHHH-HHHhhcCCcEEEECCCCcccHHHHHHHHcc--CCCcEEccCcccCCHHHHHHHHHhCCCCEEEecccccC
Confidence 455555544 4455544578899999643 3333332221 22333333334457899999888766666666666555
Q ss_pred ccccCHHHHHHHHHHHhhcCcEEEEcc
Q 019298 187 GNVYSYQHLQKLAETANKLKTLVIADE 213 (343)
Q Consensus 187 G~~~~~~~l~~l~~~~~~~~~~~i~D~ 213 (343)
|.. +..+++++|+.+|+.+++-.
T Consensus 373 GIT----ea~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 373 TVT----ESIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred CHH----HHHHHHHHHHHCCCEEEeCC
Confidence 444 78889999999998887644
No 420
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=60.75 E-value=63 Score=24.08 Aligned_cols=63 Identities=16% Similarity=0.185 Sum_probs=36.9
Q ss_pred cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 144 ~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
.|..+..+...+.++ + .++.+.+.++...++++.|+ |.|......+-..|.+.|-+++++++.
T Consensus 44 ~Gi~v~~vk~~~~~g---~-~~i~~~i~~g~i~~VInt~~-~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 44 TGLTVNRMKSGPLGG---D-QQIGALIAEGEIDAVIFFRD-PLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hCCcEEEEecCCCCc---h-hHHHHHHHcCceeEEEEcCC-CCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 577777664322222 2 44555666555555666653 223222235678899999999988764
No 421
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=57.47 E-value=49 Score=29.34 Aligned_cols=76 Identities=18% Similarity=0.129 Sum_probs=46.4
Q ss_pred eCCCCcchHHHHHh--cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCc
Q 019298 130 PRPGFPIYELSAAF--RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207 (343)
Q Consensus 130 ~~p~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 207 (343)
--|+|......... -.+-++.+|.. .-++.++++...+.+.+++.+..-+ .++-++|.++++++|+
T Consensus 50 G~~~y~sv~dlp~~~~~DlAvi~vp~~------~v~~~l~e~~~~gvk~avI~s~Gf~------~~~~~~l~~~a~~~gi 117 (291)
T PRK05678 50 GLPVFNTVAEAVEATGANASVIYVPPP------FAADAILEAIDAGIDLIVCITEGIP------VLDMLEVKAYLERKKT 117 (291)
T ss_pred CeeccCCHHHHhhccCCCEEEEEcCHH------HHHHHHHHHHHCCCCEEEEECCCCC------HHHHHHHHHHHHHcCC
Confidence 34455555555543 23333333321 2367778877778887776664432 3545689999999999
Q ss_pred EEEEccCCCc
Q 019298 208 LVIADEVYGH 217 (343)
Q Consensus 208 ~~i~D~ay~~ 217 (343)
.++==.+.+.
T Consensus 118 rvlGPNc~Gi 127 (291)
T PRK05678 118 RLIGPNCPGI 127 (291)
T ss_pred EEECCCCCcc
Confidence 9886665554
No 422
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=56.46 E-value=1.4e+02 Score=26.14 Aligned_cols=91 Identities=11% Similarity=0.092 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhcCCC-CeEEEeCCCCc---chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCC
Q 019298 110 TQAIDVAMALLSRPG-ANILLPRPGFP---IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (343)
Q Consensus 110 ~~al~~~~~~l~~~g-d~vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~np 185 (343)
.-++...++.+.+.| |.+++++--.. .+...++..|+..+.+-.. . -+.+.+++..+....-+++.+-+.-
T Consensus 108 ~~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaP--t---t~~~rl~~i~~~a~GFiY~vs~~Gv 182 (265)
T COG0159 108 NYGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVAP--T---TPDERLKKIAEAASGFIYYVSRMGV 182 (265)
T ss_pred HhhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeCC--C---CCHHHHHHHHHhCCCcEEEEecccc
Confidence 444444444554445 78888775553 3455666677776655321 1 2345666655555567777777778
Q ss_pred cccccC-HHHHHHHHHHHhhc
Q 019298 186 CGNVYS-YQHLQKLAETANKL 205 (343)
Q Consensus 186 tG~~~~-~~~l~~l~~~~~~~ 205 (343)
||.-.. ...+.++++..+++
T Consensus 183 TG~~~~~~~~~~~~v~~vr~~ 203 (265)
T COG0159 183 TGARNPVSADVKELVKRVRKY 203 (265)
T ss_pred cCCCcccchhHHHHHHHHHHh
Confidence 888765 23467777777765
No 423
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=55.85 E-value=57 Score=21.56 Aligned_cols=59 Identities=20% Similarity=0.229 Sum_probs=34.6
Q ss_pred HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC-HHHHHHHHHHHhhcCcEEEEc
Q 019298 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 138 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D 212 (343)
....+..|.++..... ..+.+.. ....+++.+|... ++ .+++++|.+++++-|-++|+|
T Consensus 11 ~~~L~~~g~~v~~~~~--------~~~~l~~----~~~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 11 YQLLEEQGVKVERWRK--------PYEALEA----DDGTLLVIGPDLR----LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHCCCeeEEecc--------cHHHhCC----CCCEEEEEeCCCC----CCchHHHHHHHHHHHcCCEEEEeC
Confidence 3445555766655421 1333322 3445566666522 33 488999999999877777764
No 424
>smart00642 Aamy Alpha-amylase domain.
Probab=54.75 E-value=17 Score=29.17 Aligned_cols=27 Identities=26% Similarity=0.347 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCcc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHL 218 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~ 218 (343)
.++++++++.|+++|+-||.|-+..+.
T Consensus 69 ~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 69 MEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 399999999999999999999998763
No 425
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=54.15 E-value=1.4e+02 Score=25.79 Aligned_cols=101 Identities=18% Similarity=0.163 Sum_probs=55.3
Q ss_pred CCCcEEEecChHHHHHHHH-HHh-----c------------CCCCeEEEeCCCCcch-HHHHHhcCceeEEeecCCCCCC
Q 019298 99 TPNDVFVTSGCTQAIDVAM-ALL-----S------------RPGANILLPRPGFPIY-ELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 99 ~~~~i~~~~g~~~al~~~~-~~l-----~------------~~gd~vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
...+|++|+|+.+.-...- ... . .+++.+.+..|.-... ...++.++.++.... . .+.
T Consensus 129 ~~~~iflttGsk~L~~f~~~~~~~~r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~al~~~~~i~~lVtK--~-SG~ 205 (249)
T PF02571_consen 129 GGGRIFLTTGSKNLPPFVPAPLPGERLFARVLPTPESALGFPPKNIIAMQGPFSKELNRALFRQYGIDVLVTK--E-SGG 205 (249)
T ss_pred CCCCEEEeCchhhHHHHhhcccCCCEEEEEECCCccccCCCChhhEEEEeCCCCHHHHHHHHHHcCCCEEEEc--C-CCc
Confidence 4489999999776554422 110 0 1122333333333222 335566676655432 2 222
Q ss_pred CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHh
Q 019298 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203 (343)
Q Consensus 160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 203 (343)
.-..++++.+..-+.+++++..|.-|.|... .+.++++.++++
T Consensus 206 ~g~~eKi~AA~~lgi~vivI~RP~~~~~~~~-~~~~~e~l~~l~ 248 (249)
T PF02571_consen 206 SGFDEKIEAARELGIPVIVIKRPPEPYGDPV-VETIEELLDWLE 248 (249)
T ss_pred hhhHHHHHHHHHcCCeEEEEeCCCCCCCCcc-cCCHHHHHHHHh
Confidence 2345777777777889999999976655543 244566666554
No 426
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=54.04 E-value=62 Score=28.67 Aligned_cols=79 Identities=15% Similarity=0.092 Sum_probs=46.5
Q ss_pred eCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEE
Q 019298 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209 (343)
Q Consensus 130 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~ 209 (343)
--|+|+.........+.++..+-+..+ .-++.++++...+.+.+++.+..- +..+-++|.++++++|+.+
T Consensus 48 G~~~y~sv~dlp~~~~~Dlavi~vpa~----~v~~~l~e~~~~Gvk~avIis~Gf------~e~~~~~l~~~a~~~giri 117 (286)
T TIGR01019 48 GLPVFDSVKEAVEETGANASVIFVPAP----FAADAIFEAIDAGIELIVCITEGI------PVHDMLKVKRYMEESGTRL 117 (286)
T ss_pred CeeccCCHHHHhhccCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCCEE
Confidence 345566666555432123333322111 236777777777888877766543 2234478999999999988
Q ss_pred EEccCCCcc
Q 019298 210 IADEVYGHL 218 (343)
Q Consensus 210 i~D~ay~~~ 218 (343)
+==.+.+..
T Consensus 118 lGPNc~Gii 126 (286)
T TIGR01019 118 IGPNCPGII 126 (286)
T ss_pred ECCCCceEE
Confidence 755555543
No 427
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=53.59 E-value=1.2e+02 Score=25.39 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=51.7
Q ss_pred CcEEEecChHHHH-HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCc--eeEEeecCCCCCCCCCHHH-HHhhhcC-Cce
Q 019298 101 NDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAFRHI--EVRHFDLLPDKGWEVDLDD-IESLADQ-NTV 175 (343)
Q Consensus 101 ~~i~~~~g~~~al-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~d~~~-l~~~~~~-~~~ 175 (343)
+.+.+.+|++.+| ..+.+.|.+.|.+|++.+-.-..-...+...+. .-..+..+-.+. -|.+. |++..+. .+.
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a--~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKA--HDVQNTLEEMEKSLGTP 91 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcH--HHHHHHHHHHHHhcCCC
Confidence 4455555554444 455566778999999887766666666666654 222222221111 12333 3333322 233
Q ss_pred EEEEeC-CCCC--cccccCHHHHHHHHHH
Q 019298 176 ALVIIN-PGNP--CGNVYSYQHLQKLAET 201 (343)
Q Consensus 176 ~i~~~~-p~np--tG~~~~~~~l~~l~~~ 201 (343)
-++++. .-+- +=..+..++|.+...+
T Consensus 92 svlVncAGItrD~~Llrmkq~qwd~vi~v 120 (256)
T KOG1200|consen 92 SVLVNCAGITRDGLLLRMKQEQWDSVIAV 120 (256)
T ss_pred cEEEEcCccccccceeeccHHHHHHHHHh
Confidence 344333 3343 3344778888887764
No 428
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=53.25 E-value=74 Score=28.07 Aligned_cols=143 Identities=18% Similarity=0.166 Sum_probs=63.0
Q ss_pred cHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeE
Q 019298 54 THVATEAVAEALLSEKFNG------YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANI 127 (343)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~v 127 (343)
.....+.+++.+.+..... |....+..+....+++.+.. ..-.++++.|+..+.. +.+.+.+. -.|
T Consensus 13 ~~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l~~------~~~DlIi~~gt~aa~~-~~~~~~~~-iPV 84 (294)
T PF04392_consen 13 LDDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKLKA------QKPDLIIAIGTPAAQA-LAKHLKDD-IPV 84 (294)
T ss_dssp HHHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHHCC------TS-SEEEEESHHHHHH-HHHH-SS--S-E
T ss_pred HHHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHHhc------CCCCEEEEeCcHHHHH-HHHhcCCC-cEE
Confidence 3556666677665532222 33445666666666666632 2336888888766654 34444432 334
Q ss_pred EEe---CCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 128 LLP---RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 128 l~~---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
++. +|....+......-|.++..+.-. ....-.++.+.+.+..-.++.++.+++.+.+ ....+.+.+.+++
T Consensus 85 Vf~~V~dp~~~~l~~~~~~~~~nvTGv~~~--~~~~~~l~l~~~l~P~~k~igvl~~~~~~~~----~~~~~~~~~~a~~ 158 (294)
T PF04392_consen 85 VFCGVSDPVGAGLVDSLDRPGKNVTGVSER--PPIEKQLELIKKLFPDAKRIGVLYDPSEPNS----VAQIEQLRKAAKK 158 (294)
T ss_dssp EEECES-TTTTTS-S-SSS--SSEEEEEE-----HHHHHHHHHHHSTT--EEEEEEETT-HHH----HHHHHHHHHHHHH
T ss_pred EEEeccChhhhhccccccCCCCCEEEEECC--cCHHHHHHHHHHhCCCCCEEEEEecCCCccH----HHHHHHHHHHHHH
Confidence 433 344333322222222334433211 1111113333333333344446667766543 2467777777888
Q ss_pred cCcEEE
Q 019298 205 LKTLVI 210 (343)
Q Consensus 205 ~~~~~i 210 (343)
+|+-++
T Consensus 159 ~g~~l~ 164 (294)
T PF04392_consen 159 LGIELV 164 (294)
T ss_dssp TT-EEE
T ss_pred cCCEEE
Confidence 887655
No 429
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=53.20 E-value=1.5e+02 Score=28.32 Aligned_cols=130 Identities=18% Similarity=0.167 Sum_probs=77.8
Q ss_pred CCCHHHHHHHHHHHhhhCCC-----------CCCCCcEEEecChHHHHHHHHHHhcCCC--C-eEEEe-CCCCcc--hHH
Q 019298 77 AGLPLTRRAIAEYLSRDLPY-----------KLTPNDVFVTSGCTQAIDVAMALLSRPG--A-NILLP-RPGFPI--YEL 139 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~-----------~~~~~~i~~~~g~~~al~~~~~~l~~~g--d-~vl~~-~p~~~~--~~~ 139 (343)
.+-.+|.+.|-+|+...... .+....+++|-|.+..+..++....+.| - .|++. +|...+ +..
T Consensus 325 eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~lr 404 (556)
T KOG1467|consen 325 EAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLLR 404 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHHH
Confidence 44556777777766654321 3556689999999888888776653333 2 33444 444433 233
Q ss_pred HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc-cCCC
Q 019298 140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD-EVYG 216 (343)
Q Consensus 140 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D-~ay~ 216 (343)
.+...|.++.++-+.. ++.+- .+-+++++=++.--.-|.++++.--..++=.++.+|+++|+= |+|-
T Consensus 405 ~Lv~~GinctYv~I~a-------~syim---~evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE~yK 472 (556)
T KOG1467|consen 405 RLVDRGINCTYVLINA-------ASYIM---LEVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCEAYK 472 (556)
T ss_pred HHHHcCCCeEEEEehh-------HHHHH---HhcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEechhh
Confidence 4555688888876531 12221 122333332333345688888887788888889999988764 4443
No 430
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=52.87 E-value=70 Score=26.89 Aligned_cols=52 Identities=13% Similarity=0.099 Sum_probs=38.4
Q ss_pred HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC
Q 019298 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216 (343)
Q Consensus 163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~ 216 (343)
.+.++++++.+..++-+=.-+..+-.. .+..+++.++|++|++.+|+++-..
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~d 75 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRVD 75 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcHH
Confidence 688888888776666654444444332 4667899999999999999987654
No 431
>PRK00077 eno enolase; Provisional
Probab=52.49 E-value=70 Score=30.15 Aligned_cols=93 Identities=10% Similarity=0.006 Sum_probs=55.6
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc
Q 019298 111 QAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (343)
Q Consensus 111 ~al~~~~~~l~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt 186 (343)
+++.... .+.++-+.+++.+|.... +..+.+..|-+ +++-.++.+.-+++.+++.+..+..-++...++.-.
T Consensus 265 e~~~~~~-~l~e~y~i~~iEdPl~~~D~~g~~~L~~~~~~~---ipI~gdE~~~t~~~~~~~~i~~~a~d~v~ik~~~~G 340 (425)
T PRK00077 265 EMIDYLA-ELVDKYPIVSIEDGLDENDWEGWKLLTEKLGDK---VQLVGDDLFVTNTKRLKKGIEKGAANSILIKVNQIG 340 (425)
T ss_pred HHHHHHH-HHHhhCCcEEEEcCCCCccHHHHHHHHHhcCCC---CeEEcCCCccCCHHHHHHHHHhCCCCEEEeCccccC
Confidence 3343333 334444678899999753 33333333212 222222223346899998887766556666666655
Q ss_pred ccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 187 GNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 187 G~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
|.. +..+++++|+.+|+.+++
T Consensus 341 Git----ea~~ia~lA~~~gi~~~v 361 (425)
T PRK00077 341 TLT----ETLDAIELAKRAGYTAVV 361 (425)
T ss_pred CHH----HHHHHHHHHHHcCCeEEE
Confidence 554 789999999999986553
No 432
>PTZ00081 enolase; Provisional
Probab=52.19 E-value=79 Score=29.92 Aligned_cols=97 Identities=11% Similarity=0.069 Sum_probs=60.7
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCCc----chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCC
Q 019298 108 GCTQAIDVAMALLSRPGANILLPRPGFP----IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vl~~~p~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~ 183 (343)
++.+.+....+.+ ++-+.+++.+|... .+..+.+..|-.+. +-.++.+.-+++.+++.+..+..-++...++
T Consensus 282 s~~eli~~~~~~l-~~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~i~---IvgDE~~~tn~~~l~~~I~~~aad~i~iKvn 357 (439)
T PTZ00081 282 TGEELVELYLDLV-KKYPIVSIEDPFDQDDWEAYAKLTAAIGQKVQ---IVGDDLLVTNPTRIKKAIEKKACNALLLKVN 357 (439)
T ss_pred CHHHHHHHHHHHH-hcCCcEEEEcCCCcccHHHHHHHHHhhCCCce---EEcCCcccCCHHHHHHHHHhCCCCEEEeccc
Confidence 4555565555444 34357889999964 34444444432332 2222333456899999888766666666666
Q ss_pred CCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 184 NPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
.-.|. .+..+++++|+++++.+++=
T Consensus 358 qiGGI----Te~l~~a~lA~~~Gi~~iis 382 (439)
T PTZ00081 358 QIGTV----TEAIEAAKLAQKNGWGVMVS 382 (439)
T ss_pred cccCH----HHHHHHHHHHHHcCCcEEEe
Confidence 54444 47888999999999887764
No 433
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=51.95 E-value=26 Score=26.68 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=22.7
Q ss_pred HHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 164 DDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 164 ~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
+.+++.+..++++++++....|. .++.++|++++++++.
T Consensus 72 ~~l~~l~~~~~P~iIvt~~~~~p---------~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 72 ERLEKLFSYNPPCIIVTRGLEPP---------PELIELAEKYNIPLLR 110 (127)
T ss_dssp CHHHHHCTTT-S-EEEETTT------------HHHHHHHHHCT--EEE
T ss_pred HHHHHHhCCCCCEEEEECcCCCC---------HHHHHHHHHhCCcEEE
Confidence 33445556688899988766543 6667778899988764
No 434
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=51.66 E-value=34 Score=32.45 Aligned_cols=73 Identities=19% Similarity=0.332 Sum_probs=44.8
Q ss_pred HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCce--------EEEE----eCC--CCCcccccCHHHHHHHHHHHhh
Q 019298 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV--------ALVI----INP--GNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~--------~i~~----~~p--~nptG~~~~~~~l~~l~~~~~~ 204 (343)
+....+++++..+.+..+.+|.+.++.+-+.-..... ..+. ..+ ..+.+-.++++++++|++.|++
T Consensus 29 d~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~~ 108 (445)
T cd06569 29 DQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAKA 108 (445)
T ss_pred HHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHHH
Confidence 3445567777777777667777776554432211000 0000 011 1244667999999999999999
Q ss_pred cCcEEEE
Q 019298 205 LKTLVIA 211 (343)
Q Consensus 205 ~~~~~i~ 211 (343)
+++-||-
T Consensus 109 rgI~VIP 115 (445)
T cd06569 109 RHIEVIP 115 (445)
T ss_pred cCCEEEE
Confidence 9988764
No 435
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=51.33 E-value=1.2e+02 Score=26.62 Aligned_cols=101 Identities=22% Similarity=0.233 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhcCCCCeEEEeC-CCCcc-----hHHHHHhcCceeEEeecCCCCCCCCCH-----HHHHhhhcCCceEEE
Q 019298 110 TQAIDVAMALLSRPGANILLPR-PGFPI-----YELSAAFRHIEVRHFDLLPDKGWEVDL-----DDIESLADQNTVALV 178 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~-p~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~-----~~l~~~~~~~~~~i~ 178 (343)
|..+..+...+.+.|.+|++.+ -.|.. ....+...|..+..... ..|+ +.++.+...+...++
T Consensus 86 TTt~akLA~~l~~~g~~V~li~~D~~r~~a~~ql~~~~~~~~i~~~~~~~------~~dp~~~~~~~l~~~~~~~~D~Vi 159 (272)
T TIGR00064 86 TTTIAKLANKLKKQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQKE------GADPAAVAFDAIQKAKARNIDVVL 159 (272)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCCCCHHHHHHHHHHHHhCCeEEEeCCC------CCCHHHHHHHHHHHHHHCCCCEEE
Confidence 3334444445566676665443 23322 12234555544432211 1233 233333344667788
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHh------hcCcEEEEccCCC
Q 019298 179 IINPGNPCGNVYSYQHLQKLAETAN------KLKTLVIADEVYG 216 (343)
Q Consensus 179 ~~~p~nptG~~~~~~~l~~l~~~~~------~~~~~~i~D~ay~ 216 (343)
+-+|....-...-.++++++.+.+. .++.++++|...+
T Consensus 160 IDT~G~~~~d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~ 203 (272)
T TIGR00064 160 IDTAGRLQNKVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTG 203 (272)
T ss_pred EeCCCCCcchHHHHHHHHHHHHHHhcccCCCCceEEEEEECCCC
Confidence 8887432212222257777777777 6788888888643
No 436
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=50.12 E-value=93 Score=28.21 Aligned_cols=76 Identities=12% Similarity=0.107 Sum_probs=48.3
Q ss_pred CCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEE
Q 019298 131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (343)
Q Consensus 131 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i 210 (343)
.-.|++|+.+++.-..+++++...... .-++...+-+..|.|++.-|- .++.++.++|++.|++++ +.+
T Consensus 58 ~k~y~syEeLakd~~vDvVyi~~~~~q-----H~evv~l~l~~~K~VL~EKPl-----a~n~~e~~~iveaA~~rg-v~~ 126 (351)
T KOG2741|consen 58 PKAYGSYEELAKDPEVDVVYISTPNPQ-----HYEVVMLALNKGKHVLCEKPL-----AMNVAEAEEIVEAAEARG-VFF 126 (351)
T ss_pred CccccCHHHHhcCCCcCEEEeCCCCcc-----HHHHHHHHHHcCCcEEecccc-----cCCHHHHHHHHHHHHHcC-cEE
Confidence 346888999999988999888764221 122222222234446655552 345689999999999988 555
Q ss_pred EccCCCc
Q 019298 211 ADEVYGH 217 (343)
Q Consensus 211 ~D~ay~~ 217 (343)
-|..+.-
T Consensus 127 meg~~~R 133 (351)
T KOG2741|consen 127 MEGLWWR 133 (351)
T ss_pred Eeeeeee
Confidence 5555544
No 437
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=50.11 E-value=2.3e+02 Score=26.73 Aligned_cols=95 Identities=8% Similarity=-0.029 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhcCCCCeEEEeC-CCCc--ch---HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc---C--CceEEE
Q 019298 110 TQAIDVAMALLSRPGANILLPR-PGFP--IY---ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---Q--NTVALV 178 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~-p~~~--~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~--~~~~i~ 178 (343)
|..+..+...+.+.|..|.+.+ -+|. .. ...+...|+.+... .+.+.+.+.+. . +...|+
T Consensus 255 TTTiaKLA~~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~---------~d~~~L~~aL~~lk~~~~~DvVL 325 (436)
T PRK11889 255 TTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV---------RDEAAMTRALTYFKEEARVDYIL 325 (436)
T ss_pred HHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec---------CCHHHHHHHHHHHHhccCCCEEE
Confidence 5555555555666675554433 2342 22 22223344444322 14455555442 1 357788
Q ss_pred EeCCCCCcccccCHHHHHHHHHHH---hhcCcEEEEccCCC
Q 019298 179 IINPGNPCGNVYSYQHLQKLAETA---NKLKTLVIADEVYG 216 (343)
Q Consensus 179 ~~~p~nptG~~~~~~~l~~l~~~~---~~~~~~~i~D~ay~ 216 (343)
+-.+....- +.+.+.++.++. ..+..++++|....
T Consensus 326 IDTaGRs~k---d~~lm~EL~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 326 IDTAGKNYR---ASETVEEMIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred EeCccccCc---CHHHHHHHHHHHhhcCCCeEEEEECCccC
Confidence 777732221 123444444444 44567778877644
No 438
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=49.97 E-value=1.9e+02 Score=25.87 Aligned_cols=56 Identities=11% Similarity=0.051 Sum_probs=37.5
Q ss_pred CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC
Q 019298 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216 (343)
Q Consensus 160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~ 216 (343)
.+|.+.+.+.+.....+-++..+..+ +..++.+.++++.+..+++--++|+|..-.
T Consensus 160 ~~~~~~l~~~~~~~~~l~vl~~~~~~-~~~~~~~~l~~~l~~l~~~~D~VIID~p~~ 215 (322)
T TIGR03815 160 RLPAGALRDALPRRGGLSVLSWGRAV-GAALPPAAVRAVLDAARRGGDLVVVDLPRR 215 (322)
T ss_pred CcCHHHHHHhCCCcCCeEEEecCCCC-cCCCCHHHHHHHHHHHHhcCCEEEEeCCCC
Confidence 35666676666544455566666443 344677888888888877667899998744
No 439
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=49.96 E-value=81 Score=23.91 Aligned_cols=57 Identities=14% Similarity=0.195 Sum_probs=40.9
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEE--eCC---CCCcccccCHHHHHHHHHHHhhcC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI--INP---GNPCGNVYSYQHLQKLAETANKLK 206 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~--~~p---~nptG~~~~~~~l~~l~~~~~~~~ 206 (343)
.+++.++. ...+|++.+.+++..+.+.|++ |.| |+..|.....+.++.+-++..+.|
T Consensus 29 vriIrvpC----~Grv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 29 VRIIRVPC----SGRVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred eEEEEccC----CCccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 34444443 3468999999999888877776 333 668999988777777777777654
No 440
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=49.68 E-value=92 Score=29.71 Aligned_cols=69 Identities=17% Similarity=0.218 Sum_probs=46.1
Q ss_pred HHHhcCceeEEeecCCCC--C---CCCCHHHHHhhhcC-----CceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcC-c
Q 019298 140 SAAFRHIEVRHFDLLPDK--G---WEVDLDDIESLADQ-----NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLK-T 207 (343)
Q Consensus 140 ~~~~~g~~~~~~~~~~~~--~---~~~d~~~l~~~~~~-----~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~-~ 207 (343)
.++..|..-..+....+. + ..+|...+++.+.+ ++.++++... ..-.|+. +-+-+|.++|++|+ +
T Consensus 248 aarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~Gqn---Dmi~kildi~eahakf 324 (838)
T KOG0630|consen 248 AAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQN---DMILKILDICEAHAKF 324 (838)
T ss_pred HHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcch---HHHHHHHHHHHHhhhe
Confidence 566677654444333322 2 36888888887754 5566666544 5677888 88999999999997 5
Q ss_pred EEEE
Q 019298 208 LVIA 211 (343)
Q Consensus 208 ~~i~ 211 (343)
|+..
T Consensus 325 WLHa 328 (838)
T KOG0630|consen 325 WLHA 328 (838)
T ss_pred eEee
Confidence 5543
No 441
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=49.47 E-value=73 Score=29.83 Aligned_cols=94 Identities=11% Similarity=0.017 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCC
Q 019298 110 TQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~np 185 (343)
.+++.... .+.++-+.+++.+|.... +..+.+..|..+ ++-.++.+.-+++.+++.+..+..-++...++.-
T Consensus 264 ~eai~~~~-~l~e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~i---pi~gdE~~~~~~~~~~~~i~~~a~d~v~ik~~~i 339 (408)
T cd03313 264 EELIDYYK-ELVKKYPIVSIEDPFDEDDWEGWAKLTAKLGDKI---QIVGDDLFVTNPERLKKGIEKKAANALLIKVNQI 339 (408)
T ss_pred HHHHHHHH-HHHHhCCcEEEEeCCCCcCHHHHHHHHHhcCCCC---eEEcCCcccCCHHHHHHHHHhCCCCEEEEccccc
Confidence 45555443 334444578899999743 333333332232 2212222334789999888776655666666665
Q ss_pred cccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 186 CGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 186 tG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
.|.. +..+++++|+.+|+.+++
T Consensus 340 GGit----e~~~ia~lA~~~G~~~~~ 361 (408)
T cd03313 340 GTLT----ETIEAIKLAKKNGYGVVV 361 (408)
T ss_pred CCHH----HHHHHHHHHHHcCCeEEc
Confidence 5554 788999999999988763
No 442
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=49.05 E-value=53 Score=29.96 Aligned_cols=70 Identities=10% Similarity=0.127 Sum_probs=29.3
Q ss_pred HhcCceeEEeecCCC--CC--CCCCHHHHHhhhc----CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc--CcEEEE
Q 019298 142 AFRHIEVRHFDLLPD--KG--WEVDLDDIESLAD----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVIA 211 (343)
Q Consensus 142 ~~~g~~~~~~~~~~~--~~--~~~d~~~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~--~~~~i~ 211 (343)
...|++.+++....- .. ..+..+++++.+. .+.+..+..|..--.+.. +.+.+.++...+. +.+++-
T Consensus 23 i~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gkk~~V~~N~~~~~~~~---~~~~~~l~~l~e~GvDaviv~ 99 (347)
T COG0826 23 IAAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGKKVYVAVNTLLHNDEL---ETLERYLDRLVELGVDAVIVA 99 (347)
T ss_pred HHcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccccccchh---hHHHHHHHHHHHcCCCEEEEc
Confidence 345666666543210 01 1245555665442 244444444442222222 2233333333333 456666
Q ss_pred ccC
Q 019298 212 DEV 214 (343)
Q Consensus 212 D~a 214 (343)
|-.
T Consensus 100 Dpg 102 (347)
T COG0826 100 DPG 102 (347)
T ss_pred CHH
Confidence 644
No 443
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=48.63 E-value=37 Score=31.10 Aligned_cols=73 Identities=21% Similarity=0.399 Sum_probs=43.1
Q ss_pred HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--Cce--EEE---EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTV--ALV---IINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 140 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~--~i~---~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
....+++++..+.+..+.+|.+.++.+-+.-.. ... ..- ...-..+.|-.++++++++|++.|+++|+-||--
T Consensus 26 ~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VIPE 105 (357)
T cd06563 26 LMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVIPE 105 (357)
T ss_pred HHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEEEe
Confidence 444456777777666656666665544332110 000 000 0011235577899999999999999998876643
No 444
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=48.61 E-value=1.5e+02 Score=25.59 Aligned_cols=97 Identities=18% Similarity=0.207 Sum_probs=60.9
Q ss_pred CcEEEecChHHHHHHH-HHHhcCCCCeEEEeCCCCcchHHHHHhcC-ceeEEeecCCCCCCCCCHHHHHhhhcC-----C
Q 019298 101 NDVFVTSGCTQAIDVA-MALLSRPGANILLPRPGFPIYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQ-----N 173 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~-~~~l~~~gd~vl~~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~ 173 (343)
..+++.+|++++|-.+ .+.|.+.|-+|++..---.....++...+ ..+....++- -|.+.+++.+.. .
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-----tD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDV-----TDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeecc-----CCHHHHHHHHHHHHHhhC
Confidence 3677777877777554 55677899999888877777888888887 3444444432 245555544432 2
Q ss_pred ceEEEEeCCCCCcccc---cCHHHHHHHHHHH
Q 019298 174 TVALVIINPGNPCGNV---YSYQHLQKLAETA 202 (343)
Q Consensus 174 ~~~i~~~~p~nptG~~---~~~~~l~~l~~~~ 202 (343)
.--++++|..-..|.. ...++|+.+.+.-
T Consensus 81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~N 112 (246)
T COG4221 81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTN 112 (246)
T ss_pred cccEEEecCCCCcCChhhhCCHHHHHHHHHHH
Confidence 3345667775444444 3557777777653
No 445
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=47.77 E-value=75 Score=23.33 Aligned_cols=21 Identities=19% Similarity=0.298 Sum_probs=15.0
Q ss_pred CHHHHHHHHHHHhhcCcEEEE
Q 019298 191 SYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~ 211 (343)
+.++.++|.+.+++++..+.+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 447778888888877776654
No 446
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=47.67 E-value=1.6e+02 Score=24.29 Aligned_cols=97 Identities=18% Similarity=0.232 Sum_probs=57.3
Q ss_pred EEEecChHHHHHHHHHHhcCCCCeEE---EeCCCC-----------cchHHHHHhcCceeEEeecCCCCCCCCCHHHHHh
Q 019298 103 VFVTSGCTQAIDVAMALLSRPGANIL---LPRPGF-----------PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIES 168 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~~~gd~vl---~~~p~~-----------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 168 (343)
++..||+-++..++..+.. .|..|. +..|.. ......++..|++...+++..... --.+.+.+
T Consensus 3 ~v~~SGGkDS~~al~~a~~-~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~e--~~~~~l~~ 79 (194)
T cd01994 3 VALISGGKDSCYALYRALE-EGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISGEEE--DEVEDLKE 79 (194)
T ss_pred EEEecCCHHHHHHHHHHHH-cCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCCCch--HHHHHHHH
Confidence 4566888888877665553 454322 222221 122456677888887776533111 01233444
Q ss_pred hhcC----CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEE
Q 019298 169 LADQ----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209 (343)
Q Consensus 169 ~~~~----~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~ 209 (343)
.+++ +...++ +|...+..+...+-++|.+.|+..
T Consensus 80 ~l~~~~~~g~~~vv-------~G~i~sd~~~~~~e~~~~~~gl~~ 117 (194)
T cd01994 80 LLRKLKEEGVDAVV-------FGAILSEYQRTRVERVCERLGLEP 117 (194)
T ss_pred HHHHHHHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEE
Confidence 3332 234444 788888889999999999998864
No 447
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=47.15 E-value=1.5e+02 Score=25.49 Aligned_cols=75 Identities=13% Similarity=0.096 Sum_probs=45.4
Q ss_pred hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC-ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCC
Q 019298 137 YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN-TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215 (343)
Q Consensus 137 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~-~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay 215 (343)
|.+.....+++-+.+ +..-+|-+-..+|..++.+. ..+.+ ....+-+..+.+++++|++-+++-..-
T Consensus 93 y~DILD~K~L~eIVV--n~RIdWL~HfSALLSAvGE~NVpLA~----------~VNI~GvHNil~vAa~~kL~iFVPSTI 160 (366)
T KOG2774|consen 93 YLDILDQKSLEEIVV--NKRIDWLVHFSALLSAVGETNVPLAL----------QVNIRGVHNILQVAAKHKLKVFVPSTI 160 (366)
T ss_pred hhhhhccccHHHhhc--ccccceeeeHHHHHHHhcccCCceee----------eecchhhhHHHHHHHHcCeeEeecccc
Confidence 444444444433222 22234666678888777652 22222 122255788999999999999999888
Q ss_pred CccccCCC
Q 019298 216 GHLVFGDK 223 (343)
Q Consensus 216 ~~~~~~~~ 223 (343)
+.|..+++
T Consensus 161 GAFGPtSP 168 (366)
T KOG2774|consen 161 GAFGPTSP 168 (366)
T ss_pred cccCCCCC
Confidence 87765543
No 448
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=46.45 E-value=2.2e+02 Score=25.46 Aligned_cols=103 Identities=14% Similarity=0.124 Sum_probs=58.8
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCC--eEEEe--CCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 98 LTPNDVFVTSGCTQAIDVAMALLSRPGA--NILLP--RPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 98 ~~~~~i~~~~g~~~al~~~~~~l~~~gd--~vl~~--~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
+...++++|.|.+.+...++....+.|. +|++. .|.+.+. ....+..|.++..+. | .+....++
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~---------D-sa~~~~~~ 186 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV---------D-SAVGAFMS 186 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe---------c-hHHHHHHH
Confidence 4567899999988888888877777775 55555 5666442 334556676666552 1 22222222
Q ss_pred CCceEEEEeC-CCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 172 QNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 172 ~~~~~i~~~~-p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
+...+++-. .---.|...++----.|+-.|++++.++++
T Consensus 187 -~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 187 -RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred -hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 333443321 112233444444445677778888877654
No 449
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=46.41 E-value=2e+02 Score=25.09 Aligned_cols=95 Identities=18% Similarity=0.262 Sum_probs=55.9
Q ss_pred HHHHHHHHhcCCC-CeEEEeCCCCcc---hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcc
Q 019298 112 AIDVAMALLSRPG-ANILLPRPGFPI---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187 (343)
Q Consensus 112 al~~~~~~l~~~g-d~vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG 187 (343)
++...+..+.+.| |.|++++-.+.. +...++..|+..+.+-. + . -+.+.++...+.....|++.+-...||
T Consensus 107 G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~-P-t---T~~eri~~i~~~a~gFIY~vS~~GvTG 181 (263)
T CHL00200 107 GINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIA-P-T---SSKSRIQKIARAAPGCIYLVSTTGVTG 181 (263)
T ss_pred CHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEEC-C-C---CCHHHHHHHHHhCCCcEEEEcCCCCCC
Confidence 3444455555555 788888766644 34456677777665422 1 1 135666665555555676666667888
Q ss_pred cccC-HHHHHHHHHHHhhc-CcEEEE
Q 019298 188 NVYS-YQHLQKLAETANKL-KTLVIA 211 (343)
Q Consensus 188 ~~~~-~~~l~~l~~~~~~~-~~~~i~ 211 (343)
..-. .+++.++.+.++++ +..+.+
T Consensus 182 ~~~~~~~~~~~~i~~ir~~t~~Pi~v 207 (263)
T CHL00200 182 LKTELDKKLKKLIETIKKMTNKPIIL 207 (263)
T ss_pred CCccccHHHHHHHHHHHHhcCCCEEE
Confidence 7422 25677777777765 444444
No 450
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=45.44 E-value=2.7e+02 Score=26.23 Aligned_cols=113 Identities=20% Similarity=0.217 Sum_probs=64.1
Q ss_pred CCCCCCCCcEEEecC-----hHHHHHHHHHHhcCCCCeEEEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHH
Q 019298 94 LPYKLTPNDVFVTSG-----CTQAIDVAMALLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDI 166 (343)
Q Consensus 94 ~~~~~~~~~i~~~~g-----~~~al~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 166 (343)
.|-++-+..+++..| =+..+..+...+.+.+ +|++.+-.=.. ..--+..+|.....+.+..+ .|++.+
T Consensus 86 LGGG~V~Gs~iLIgGdPGIGKSTLLLQva~~lA~~~-~vLYVsGEES~~QiklRA~RL~~~~~~l~l~aE----t~~e~I 160 (456)
T COG1066 86 LGGGLVPGSVILIGGDPGIGKSTLLLQVAARLAKRG-KVLYVSGEESLQQIKLRADRLGLPTNNLYLLAE----TNLEDI 160 (456)
T ss_pred hcCCcccccEEEEccCCCCCHHHHHHHHHHHHHhcC-cEEEEeCCcCHHHHHHHHHHhCCCccceEEehh----cCHHHH
Confidence 344666777766544 3556666666676676 66655433322 23334445544333433333 468888
Q ss_pred HhhhcC-CceEEEEeCCC---CCc-----ccc-cCHHHHHHHHHHHhhcCcEEEE
Q 019298 167 ESLADQ-NTVALVIINPG---NPC-----GNV-YSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 167 ~~~~~~-~~~~i~~~~p~---npt-----G~~-~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
.+.+.+ ++.++++-+-+ +|. |.+ -=++--.+|.+++|++|+.+++
T Consensus 161 ~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 161 IAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 887754 67777765442 222 433 2224446788899999877654
No 451
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=44.73 E-value=71 Score=24.66 Aligned_cols=59 Identities=22% Similarity=0.316 Sum_probs=40.6
Q ss_pred CCCCHHHHHhhhcC-CceEEEEeCCCCCcccccC-HHHHHHHHHHHhhc--Cc-EEEEccCCCc
Q 019298 159 WEVDLDDIESLADQ-NTVALVIINPGNPCGNVYS-YQHLQKLAETANKL--KT-LVIADEVYGH 217 (343)
Q Consensus 159 ~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~--~~-~~i~D~ay~~ 217 (343)
...+++.|.+.+++ .+..+++-.|-|..|..-+ .+..++.++..++. ++ +.++||.|.-
T Consensus 36 ~~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 36 REKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred CchHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 35689999998865 6788999999877776533 24556666655543 44 5578888764
No 452
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=44.46 E-value=23 Score=35.12 Aligned_cols=28 Identities=25% Similarity=0.376 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++-|+++|+-||.|-+|.+..
T Consensus 228 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 228 IRELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred HHHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 3899999999999999999999997753
No 453
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=44.43 E-value=1.8e+02 Score=24.06 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=22.6
Q ss_pred HHhhhcCCceEEEEeCC-CCCcccccCHHHHHHHHHHHhh
Q 019298 166 IESLADQNTVALVIINP-GNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 166 l~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~ 204 (343)
|.+++.+.+.-++++.- .|+||+.+.. =..+.++|..
T Consensus 128 i~e~lp~r~VdvVlSDMapnaTGvr~~D--h~~~i~LC~s 165 (232)
T KOG4589|consen 128 IFEALPNRPVDVVLSDMAPNATGVRIRD--HYRSIELCDS 165 (232)
T ss_pred HHHhCCCCcccEEEeccCCCCcCcchhh--HHHHHHHHHH
Confidence 44444445555666655 7999998643 3455666653
No 454
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]
Probab=44.32 E-value=1.1e+02 Score=24.77 Aligned_cols=94 Identities=17% Similarity=0.217 Sum_probs=60.5
Q ss_pred CCcEEEecChHHHHHHHHHHhcC-CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEE
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSR-PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL 177 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~-~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i 177 (343)
+|.-++-.++...|..++.++.+ -++.++..+|..+.....+...|.++..- +..+|. +++..+++. .++++
T Consensus 17 ~EKPlleV~GkpLI~~v~~al~~~~d~i~v~isp~tp~t~~~~~~~gv~vi~t---pG~GYv---~Dl~~al~~l~~P~l 90 (177)
T COG2266 17 PEKPLLEVCGKPLIDRVLEALRKIVDEIIVAISPHTPKTKEYLESVGVKVIET---PGEGYV---EDLRFALESLGTPIL 90 (177)
T ss_pred CcCcchhhCCccHHHHHHHHHHhhcCcEEEEeCCCCHhHHHHHHhcCceEEEc---CCCChH---HHHHHHHHhcCCceE
Confidence 67777778889999999998876 35677788999999999988888666654 334544 444444443 33454
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHh
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETAN 203 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~ 203 (343)
+++.= =|. +....+..+.+-+.
T Consensus 91 vvsaD-Lp~---l~~~~i~~vi~~~~ 112 (177)
T COG2266 91 VVSAD-LPF---LNPSIIDSVIDAAA 112 (177)
T ss_pred EEecc-ccc---CCHHHHHHHHHHHh
Confidence 44321 111 11256667766555
No 455
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=44.16 E-value=92 Score=27.78 Aligned_cols=80 Identities=23% Similarity=0.170 Sum_probs=55.2
Q ss_pred cEEEecChHHHHHHHHH-HhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298 102 DVFVTSGCTQAIDVAMA-LLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~-~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 176 (343)
...+.+|++++|-.... -|.++|-+|++..-+-.-... ..+..+.+++.+..|..++. .+.|++++.+..-...
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~-~~ye~i~~~l~~~~Vg 128 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGD-EVYEKLLEKLAGLDVG 128 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCc-hhHHHHHHHhcCCceE
Confidence 77888899998876643 367889777777666654444 33445666666665554442 2689999988877777
Q ss_pred EEEeCC
Q 019298 177 LVIINP 182 (343)
Q Consensus 177 i~~~~p 182 (343)
|+++|.
T Consensus 129 ILVNNv 134 (312)
T KOG1014|consen 129 ILVNNV 134 (312)
T ss_pred EEEecc
Confidence 777776
No 456
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=44.16 E-value=84 Score=28.36 Aligned_cols=133 Identities=17% Similarity=0.126 Sum_probs=64.5
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC-----hHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEe
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG-----CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF 151 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g-----~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~ 151 (343)
.|.+.|=..+. -| ++....++...| =|.....++....+.|..|++.+..+......++..|.+...+
T Consensus 38 TGi~~LD~~Lg------~G-Glp~G~iteI~G~~GsGKTtLaL~~~~~~~~~g~~v~yId~E~~~~~~~a~~lGvd~~~l 110 (321)
T TIGR02012 38 TGSLSLDLALG------VG-GLPRGRIIEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYARKLGVDIDNL 110 (321)
T ss_pred CCCHHHHHHhc------CC-CCcCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEEcccchhHHHHHHHcCCCHHHe
Confidence 46666655442 01 455665653322 2222222233334567677776666655555666677654333
Q ss_pred ecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCc---------cccc---C----HHHHHHHHHHHhhcCcEEEE-cc
Q 019298 152 DLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPC---------GNVY---S----YQHLQKLAETANKLKTLVIA-DE 213 (343)
Q Consensus 152 ~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~npt---------G~~~---~----~~~l~~l~~~~~~~~~~~i~-D~ 213 (343)
-+...+...--++.++..++. .+++|++-+..+-. |... . ...+.+|..+++++|+.+|+ .+
T Consensus 111 ~v~~p~~~eq~l~~~~~li~~~~~~lIVIDSv~al~~~~E~e~~~g~~~~~~~aR~m~~~lr~L~~~l~~~~~tvi~tNQ 190 (321)
T TIGR02012 111 LVSQPDTGEQALEIAETLVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSKSNTTAIFINQ 190 (321)
T ss_pred EEecCCCHHHHHHHHHHHhhccCCcEEEEcchhhhccchhhcccccccchhHHHHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 222211111012333334433 56666665554321 1110 0 13567788889999876654 55
Q ss_pred CCC
Q 019298 214 VYG 216 (343)
Q Consensus 214 ay~ 216 (343)
++.
T Consensus 191 vr~ 193 (321)
T TIGR02012 191 IRE 193 (321)
T ss_pred cee
Confidence 554
No 457
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=43.82 E-value=2.2e+02 Score=24.96 Aligned_cols=97 Identities=18% Similarity=0.210 Sum_probs=50.1
Q ss_pred cEEEecChHHHHHHH-HHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeecCCCCCCCCCHHHHHhhhcCC--c
Q 019298 102 DVFVTSGCTQAIDVA-MALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLADQN--T 174 (343)
Q Consensus 102 ~i~~~~g~~~al~~~-~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~--~ 174 (343)
..++.+|+|.+|-.. .+.|.+.|..|++..-.=.-...+++. .|.++..++.|-.+. -+.+.+...+..+ .
T Consensus 7 ~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~--~~~~~l~~~l~~~~~~ 84 (265)
T COG0300 7 KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP--EALERLEDELKERGGP 84 (265)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh--hHHHHHHHHHHhcCCc
Confidence 445556666666554 445677887776665555444443333 355666666553221 2345555544443 4
Q ss_pred eEEEEeCCC-CCcc--cccCHHHHHHHHH
Q 019298 175 VALVIINPG-NPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 175 ~~i~~~~p~-nptG--~~~~~~~l~~l~~ 200 (343)
.-++++|.. .-.| ...+.++.+++.+
T Consensus 85 IdvLVNNAG~g~~g~f~~~~~~~~~~mi~ 113 (265)
T COG0300 85 IDVLVNNAGFGTFGPFLELSLDEEEEMIQ 113 (265)
T ss_pred ccEEEECCCcCCccchhhCChHHHHHHHH
Confidence 445666663 3344 2244455554443
No 458
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=43.64 E-value=2e+02 Score=24.17 Aligned_cols=109 Identities=13% Similarity=0.027 Sum_probs=54.2
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEE
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~ 179 (343)
.+.|.+.+.-..-+.-....+ ..+.|.+....- .+.+.+...+.++..-|.....+.++|.--.+.+.+++..+-+-
T Consensus 60 ~~gv~i~~~np~~l~~~V~k~--~~~vv~V~GGd~-~vNR~AvE~~VDVL~~P~~~Rkd~g~dHVLAKlAa~n~VAIe~~ 136 (216)
T PRK03892 60 KVAILLVTPKPSLIREVKQRF--LNYLIYVQGGDL-RVNRYAIERGVDAIISPWVGRKDPGIDHVLARMAAKRGVAIGFS 136 (216)
T ss_pred cceEEEecCCHHHHHHHHHhc--cceEEEEECCcH-HHHHHHHhcccceeecccccCcCCCccHHHHHHHHHcCeEEEEe
Confidence 346666555555666666555 345555544333 33344433455554433322112234422222233333333233
Q ss_pred eCC---CCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 180 INP---GNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 180 ~~p---~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
-.| .++.-..-..+.++++.+++++|++++++
T Consensus 137 L~plL~~~G~~Rar~L~~~r~~l~L~rKYd~P~VI 171 (216)
T PRK03892 137 LSPLLRANPYERANILRFMMKAWQLVNKYKVPRFI 171 (216)
T ss_pred cHHHHhhCchhHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 344 24443333446788899999999877554
No 459
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=43.46 E-value=19 Score=31.59 Aligned_cols=28 Identities=29% Similarity=0.337 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+++++|++.|+++|+-||+|-+..+..
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V~NH~~ 78 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVVPNHTS 78 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETSEEE
T ss_pred hhhhhhhhhccccccceEEEeeeccccc
Confidence 3999999999999999999999987654
No 460
>PRK06194 hypothetical protein; Provisional
Probab=43.41 E-value=2.2e+02 Score=24.64 Aligned_cols=65 Identities=15% Similarity=0.058 Sum_probs=33.0
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH---hcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA---FRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
..+++|.|+...=..+.+.|.+.|..|++.+-.-........ ..+.++..+..+- -|.+.+++.+
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~ 74 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDV-----SDAAQVEALA 74 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHH
Confidence 345555555444445556677788887766543322222222 1244555555432 2455555544
No 461
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=41.93 E-value=1.4e+02 Score=26.22 Aligned_cols=83 Identities=22% Similarity=0.202 Sum_probs=55.0
Q ss_pred CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 125 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
...+.--|-|.......+..+.+...+.+.+. .=.|++.++++...+.+++.+-+=|. .|..++.+.+++
T Consensus 45 G~~~~g~PVf~tV~EA~~~~~a~~svI~Vp~~----~aadai~EAida~i~liv~ITEgIP~------~D~~~~~~~a~~ 114 (293)
T COG0074 45 GQTILGLPVFNTVEEAVKETGANASVIFVPPP----FAADAILEAIDAGIKLVVIITEGIPV------LDMLELKRYARE 114 (293)
T ss_pred ceEEcCccHHHHHHHHHHhhCCCEEEEecCcH----HHHHHHHHHHhCCCcEEEEEeCCCCH------HHHHHHHHHHHh
Confidence 34455577777777777766666555444332 23577777787777777776666554 788888899999
Q ss_pred cCcEEEEccCCCc
Q 019298 205 LKTLVIADEVYGH 217 (343)
Q Consensus 205 ~~~~~i~D~ay~~ 217 (343)
.++.+|==++=+.
T Consensus 115 ~g~~iiGPncpGi 127 (293)
T COG0074 115 KGTRLIGPNCPGI 127 (293)
T ss_pred cCCEEECCCCCcc
Confidence 8877765555443
No 462
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=41.47 E-value=1.4e+02 Score=21.92 Aligned_cols=95 Identities=16% Similarity=0.092 Sum_probs=50.6
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccc
Q 019298 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNV 189 (343)
Q Consensus 111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~ 189 (343)
+.+..+++.+.+.|-+++...- .....+..|.++..+.-.++++ + .++.+.+.+ +..-++++.|. +.-..
T Consensus 12 ~~~~~~a~~l~~~G~~i~AT~g----Ta~~L~~~Gi~~~~v~~~~~~g---~-~~i~~~i~~~g~idlVIn~~~-~~~~~ 82 (112)
T cd00532 12 AMLVDLAPKLSSDGFPLFATGG----TSRVLADAGIPVRAVSKRHEDG---E-PTVDAAIAEKGKFDVVINLRD-PRRDR 82 (112)
T ss_pred HHHHHHHHHHHHCCCEEEECcH----HHHHHHHcCCceEEEEecCCCC---C-cHHHHHHhCCCCEEEEEEcCC-CCccc
Confidence 3344444555555655543321 2333455777776664332211 2 345555655 55555666664 11100
Q ss_pred cCHHHHHHHHHHHhhcCcEEEEccC
Q 019298 190 YSYQHLQKLAETANKLKTLVIADEV 214 (343)
Q Consensus 190 ~~~~~l~~l~~~~~~~~~~~i~D~a 214 (343)
-...+-..|.+.|.+++++++.+..
T Consensus 83 ~~~~dg~~iRR~A~~~~Ip~~T~~~ 107 (112)
T cd00532 83 CTDEDGTALLRLARLYKIPVTTPNA 107 (112)
T ss_pred ccCCChHHHHHHHHHcCCCEEECHH
Confidence 1124567888889999999987743
No 463
>PRK15452 putative protease; Provisional
Probab=41.23 E-value=82 Score=29.86 Aligned_cols=82 Identities=10% Similarity=0.051 Sum_probs=43.0
Q ss_pred eEEEeCCCCcchHHHHHhcCceeEEeecCCCC----CCCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHH
Q 019298 126 NILLPRPGFPIYELSAAFRHIEVRHFDLLPDK----GWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKL 198 (343)
Q Consensus 126 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l 198 (343)
.++.+.-+... ...+..+|++.+++.....+ ...++.++++++++ ..-+.+++..|.-|. .++++.+
T Consensus 5 eLlapag~~e~-l~aAi~~GADaVY~G~~~~~~R~~~~~f~~edl~eav~~ah~~g~kvyvt~n~i~~-----e~el~~~ 78 (443)
T PRK15452 5 ELLSPAGTLKN-MRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGINEAHALGKKFYVVVNIAPH-----NAKLKTF 78 (443)
T ss_pred EEEEECCCHHH-HHHHHHCCCCEEEECCCccchhhhccCCCHHHHHHHHHHHHHcCCEEEEEecCcCC-----HHHHHHH
Confidence 45555555544 34566789999988653211 12345677777654 222344544442222 2455444
Q ss_pred HHHHh---hc--CcEEEEcc
Q 019298 199 AETAN---KL--KTLVIADE 213 (343)
Q Consensus 199 ~~~~~---~~--~~~~i~D~ 213 (343)
.+..+ +. +.+++-|-
T Consensus 79 ~~~l~~l~~~gvDgvIV~d~ 98 (443)
T PRK15452 79 IRDLEPVIAMKPDALIMSDP 98 (443)
T ss_pred HHHHHHHHhCCCCEEEEcCH
Confidence 44443 33 56777773
No 464
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=40.99 E-value=1.1e+02 Score=25.80 Aligned_cols=57 Identities=16% Similarity=0.168 Sum_probs=44.6
Q ss_pred CCCcEEEecChHHHHHHHH-HHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC
Q 019298 99 TPNDVFVTSGCTQAIDVAM-ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP 155 (343)
Q Consensus 99 ~~~~i~~~~g~~~al~~~~-~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 155 (343)
.+.-|++|.+++++|-.++ +-+.+.|..|+-..-.-....++....|+.....++..
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~ 63 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSK 63 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCC
Confidence 4557888888888886654 34678999999888888888899988998887776643
No 465
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=40.90 E-value=3e+02 Score=25.47 Aligned_cols=123 Identities=19% Similarity=0.184 Sum_probs=60.7
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC-----hHHHHHHHHHHhcCCCCeEEEeCCCCcc--hHHHHHhcCceeE
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG-----CTQAIDVAMALLSRPGANILLPRPGFPI--YELSAAFRHIEVR 149 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g-----~~~al~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~ 149 (343)
.|.++|-+.+ |-++.+..+++..| =|..+..++..+.+.|.+|++.+-.-.. ...-+...|....
T Consensus 66 TGi~eLD~vL--------gGGi~~GslvLI~G~pG~GKStLllq~a~~~a~~g~~VlYvs~EEs~~qi~~Ra~rlg~~~~ 137 (372)
T cd01121 66 TGIEELDRVL--------GGGLVPGSVILIGGDPGIGKSTLLLQVAARLAKRGGKVLYVSGEESPEQIKLRADRLGISTE 137 (372)
T ss_pred cCCHHHHHhh--------cCCccCCeEEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEECCcCHHHHHHHHHHcCCCcc
Confidence 4666655433 12556666665433 2444444444455555566654332221 1222334454333
Q ss_pred EeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCc-----ccccCHH----HHHHHHHHHhhcCcEEEE
Q 019298 150 HFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPC-----GNVYSYQ----HLQKLAETANKLKTLVIA 211 (343)
Q Consensus 150 ~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~npt-----G~~~~~~----~l~~l~~~~~~~~~~~i~ 211 (343)
.+.+.. ..+++.+.+.+.. +++.+++-+-++.. +..-+.. -+.+|.++++++++.+|+
T Consensus 138 ~l~l~~----e~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 138 NLYLLA----ETNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred cEEEEc----cCcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 332222 1357788777654 66666665543321 1111123 345678889999976644
No 466
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=40.82 E-value=54 Score=29.86 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=26.7
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 173 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
+..-|+...++.|.|.+++.+++.++.+.++++|+.+-+
T Consensus 25 Gv~giV~al~~~p~g~~W~~e~i~~~k~~ie~~GL~~~v 63 (351)
T PF03786_consen 25 GVTGIVTALHDIPNGEVWDYEEIRALKERIEAAGLTLSV 63 (351)
T ss_dssp TEEEEEE--SSS-TTS---HHHHHHHHHHHHCTT-EEEE
T ss_pred CCCCeeeCCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 455677777889999999999999999999999866544
No 467
>PRK09354 recA recombinase A; Provisional
Probab=40.68 E-value=1.1e+02 Score=27.86 Aligned_cols=133 Identities=17% Similarity=0.132 Sum_probs=65.7
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC-----hHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEe
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG-----CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF 151 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g-----~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~ 151 (343)
.|.+.|=+.+. -| ++....|+...| =|.....++....+.|..+++.+..+......++..|.++..+
T Consensus 43 TGi~~LD~~LG------~G-Gip~G~IteI~G~~GsGKTtLal~~~~~~~~~G~~~~yId~E~s~~~~~a~~lGvdld~l 115 (349)
T PRK09354 43 TGSLALDIALG------IG-GLPRGRIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYAKKLGVDIDNL 115 (349)
T ss_pred CCcHHHHHHhc------CC-CCcCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHcCCCHHHe
Confidence 46566654431 02 556666654332 1222222222334567777777777766666777777764433
Q ss_pred ecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCc---------ccc-c-CH-----HHHHHHHHHHhhcCcEEEE-cc
Q 019298 152 DLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPC---------GNV-Y-SY-----QHLQKLAETANKLKTLVIA-DE 213 (343)
Q Consensus 152 ~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~npt---------G~~-~-~~-----~~l~~l~~~~~~~~~~~i~-D~ 213 (343)
-+...+...--++.++..++. .+++|++-+..... |.. . .. ..+.+|..+++++|+.+|+ .+
T Consensus 116 li~qp~~~Eq~l~i~~~li~s~~~~lIVIDSvaaL~~~~E~eg~~gd~~~~~qar~ms~~Lr~L~~~l~k~~itvI~tNQ 195 (349)
T PRK09354 116 LVSQPDTGEQALEIADTLVRSGAVDLIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNISKSNTTVIFINQ 195 (349)
T ss_pred EEecCCCHHHHHHHHHHHhhcCCCCEEEEeChhhhcchhhhcCCccccchhHHHHHHHHHHHHHHHHHHHcCcEEEEEEe
Confidence 222211100012333334443 46667766654321 111 0 00 2367788888999977655 44
Q ss_pred CCC
Q 019298 214 VYG 216 (343)
Q Consensus 214 ay~ 216 (343)
++.
T Consensus 196 vr~ 198 (349)
T PRK09354 196 IRE 198 (349)
T ss_pred eee
Confidence 444
No 468
>PRK12772 bifunctional flagellar biosynthesis protein FliR/FlhB; Provisional
Probab=40.64 E-value=3.8e+02 Score=26.69 Aligned_cols=90 Identities=16% Similarity=0.166 Sum_probs=51.1
Q ss_pred CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEee
Q 019298 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152 (343)
Q Consensus 73 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~ 152 (343)
|-...|.|+.+..+.+...+ ....-+..=. |.-.|++.+|+|... .+.
T Consensus 487 ~Ke~EGdP~iK~r~R~~~re-------------------~~~~~m~~~V-~~AdvVitNPTH~AV------------AL~ 534 (609)
T PRK12772 487 YKQDEGDPQIKAKIKQKQRE-------------------MAMQRMMQEV-PKATVVVTNPTHIAV------------ALK 534 (609)
T ss_pred HHhccCCHHHHHHHHHHHHH-------------------HHHhhhhccC-CCCcEEEECCCceEE------------EeE
Confidence 33467889999998887743 1111111112 456788899999642 111
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~ 217 (343)
++++.. .-|.++. -|.. +--.+|.+++++||+++++|-.-+.
T Consensus 535 Y~~~~~-------------~aP~VvA-------KG~d---~~A~~Ir~~A~e~~VPive~~~LAR 576 (609)
T PRK12772 535 YEEGKD-------------EAPKVVA-------KGAD---YVALKIKEIAKENDVPIIENKPLAR 576 (609)
T ss_pred eCCCCC-------------CCCEEEE-------eeCc---HHHHHHHHHHHHCCCcEEeCHHHHH
Confidence 122111 0122222 4444 4557777788899999998865543
No 469
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=40.12 E-value=46 Score=30.19 Aligned_cols=68 Identities=21% Similarity=0.425 Sum_probs=39.4
Q ss_pred HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
.....++++.....+....+|.+.+..+.+.-.... -.++.+ |..++++++++|++.|+++|+-||-.
T Consensus 25 d~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga-----~~~~~~-~~~yT~~di~~lv~yA~~~gI~VIPe 92 (351)
T PF00728_consen 25 DQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGA-----YRPSDA-GGYYTKEDIRELVAYAKERGIEVIPE 92 (351)
T ss_dssp HHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTT-----ESTTCT-ESEBEHHHHHHHHHHHHHTT-EEEEE
T ss_pred HHHHHcCCcEEEEEEecCCCCccccCCCccccccCc-----cccccc-cccCCHHHHHHHHHHHHHcCCceeee
Confidence 344556777777777666666655433332211100 001113 44999999999999999999877753
No 470
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=40.08 E-value=3.2e+02 Score=25.61 Aligned_cols=31 Identities=19% Similarity=0.190 Sum_probs=18.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeC
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPR 131 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~ 131 (343)
..+++|.|+...=..+.+.|.+.|.+|+...
T Consensus 179 K~VLITGASgGIG~aLA~~La~~G~~Vi~l~ 209 (406)
T PRK07424 179 KTVAVTGASGTLGQALLKELHQQGAKVVALT 209 (406)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4555555444444444556777887776554
No 471
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=39.79 E-value=1.3e+02 Score=28.36 Aligned_cols=92 Identities=10% Similarity=-0.032 Sum_probs=53.5
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCCcc-hH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc
Q 019298 111 QAIDVAMALLSRPGANILLPRPGFPI-YE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (343)
Q Consensus 111 ~al~~~~~~l~~~gd~vl~~~p~~~~-~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt 186 (343)
+++...- .++++-+.+++.+|.... +. .+.+..|-. ..+- .++.+.-+++.+++.+..+..-++...++.-.
T Consensus 266 eai~~~~-~lle~~~i~~iEdPl~~~D~~~~~~L~~~~~~~-ipI~--gDE~~~t~~~~~~~~i~~~a~d~v~ik~~~iG 341 (425)
T TIGR01060 266 EMIEYYK-ELVEKYPIVSIEDGLSEEDWEGWAELTKELGDK-VQIV--GDDLFVTNTEILREGIEMGVANSILIKPNQIG 341 (425)
T ss_pred HHHHHHH-HHHhcCCcEEEEcCCCcccHHHHHHHHHhcCCC-CeEE--eCCCcccCHHHHHHHHHhCCCCEEEecccccC
Confidence 5554433 233444577899999743 22 222222212 2222 22222336888888887666555666665554
Q ss_pred ccccCHHHHHHHHHHHhhcCcEEE
Q 019298 187 GNVYSYQHLQKLAETANKLKTLVI 210 (343)
Q Consensus 187 G~~~~~~~l~~l~~~~~~~~~~~i 210 (343)
|. .+..+++++|+.+|+.++
T Consensus 342 GI----tea~~ia~lA~~~Gi~~v 361 (425)
T TIGR01060 342 TL----TETLDAVELAKKAGYTAV 361 (425)
T ss_pred CH----HHHHHHHHHHHHcCCcEE
Confidence 44 478899999999998644
No 472
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=39.59 E-value=2.3e+02 Score=23.80 Aligned_cols=22 Identities=18% Similarity=0.110 Sum_probs=18.5
Q ss_pred cCHHHHHHHHHHHhhcCcEEEE
Q 019298 190 YSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 190 ~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
.+.++++++.++++++|+-+++
T Consensus 190 ~~~~~l~~~~~~~~~~gl~~~i 211 (213)
T PRK10076 190 PSSADVATMREMAERAGFQVTV 211 (213)
T ss_pred cCHHHHHHHHHHHHHcCCeEEe
Confidence 5778999999999999887764
No 473
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=38.53 E-value=1.9e+02 Score=22.45 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=48.3
Q ss_pred EEEecChHHHHHHHHHHhcCCCC-eEEEeCCC--CcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 103 VFVTSGCTQAIDVAMALLSRPGA-NILLPRPG--FPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~~~gd-~vl~~~p~--~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
+++|.|++..=..+.+.|.+.|. .|++.... ....... +...+.++..++.+. -+.+.+++.++.
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDL-----SDPESIRALIEEVIKR 77 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESET-----TSHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccc-----cccccccccccccccc
Confidence 45565555555555666666654 55555444 2222222 344567777777543 245666554432
Q ss_pred --CceEEEEeCCCCCcccc--cCHHHHHHHHHHH
Q 019298 173 --NTVALVIINPGNPCGNV--YSYQHLQKLAETA 202 (343)
Q Consensus 173 --~~~~i~~~~p~nptG~~--~~~~~l~~l~~~~ 202 (343)
....++.+....+.+.. ++.+++++..+.-
T Consensus 78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 111 (167)
T PF00106_consen 78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRVN 111 (167)
T ss_dssp HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhhhhccccc
Confidence 33444544443333333 3456666666543
No 474
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=38.18 E-value=28 Score=22.99 Aligned_cols=27 Identities=33% Similarity=0.469 Sum_probs=21.0
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298 179 IINPGNPCGNVYSYQHLQKLAETANKLK 206 (343)
Q Consensus 179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~ 206 (343)
...+.-|.|.+ +.++++.|++++++++
T Consensus 11 ~v~~~~~~G~i-~~~~l~~la~ia~~yg 37 (69)
T PF03460_consen 11 MVRIRIPGGRI-SAEQLRALAEIAEKYG 37 (69)
T ss_dssp EEEEB-GGGEE-EHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCEEE-CHHHHHHHHHHHHHhC
Confidence 34455667877 7799999999999986
No 475
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=38.01 E-value=33 Score=25.45 Aligned_cols=66 Identities=15% Similarity=0.113 Sum_probs=31.3
Q ss_pred HhcCCC-CeEEEeCCCCc--------chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCC
Q 019298 119 LLSRPG-ANILLPRPGFP--------IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGN 184 (343)
Q Consensus 119 ~l~~~g-d~vl~~~p~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~n 184 (343)
.+.+.| ++|+.-.|... .....++..|+..+.+|+....-..-+++.+.+++.. ..++++.|..++
T Consensus 22 ~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~~~~~~~~v~~f~~~l~~~~~Pvl~hC~sG~ 97 (110)
T PF04273_consen 22 QLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDGGAITEEDVEAFADALESLPKPVLAHCRSGT 97 (110)
T ss_dssp HHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----TTT--HHHHHHHHHHHHTTTTSEEEE-SCSH
T ss_pred HHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCCCCCCHHHHHHHHHHHHhCCCCEEEECCCCh
Confidence 344455 67777666532 2446788999999999987543211224444455554 335666776443
No 476
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=37.95 E-value=4.3e+02 Score=26.53 Aligned_cols=89 Identities=13% Similarity=0.247 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc--CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc
Q 019298 109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (343)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt 186 (343)
+.+|+.++.+. .++.+.++..-+|+.....++.. ++.+... + .|+++.... ..+...+++.-|. -.
T Consensus 192 aaEAm~l~~~~--~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~-~-------~~~~~~~~s-~~~v~gvlvQYP~-t~ 259 (1001)
T KOG2040|consen 192 AAEAMALCNRI--NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVV-V-------SDIKEADYS-SKDVSGVLVQYPD-TE 259 (1001)
T ss_pred HHHHHHHHHhh--cccceEEecCCCCcchhhhhhccccccceeEE-e-------cCHHHhhcc-ccceeEEEEEcCC-CC
Confidence 34555444433 34567999999999877766532 2222211 1 122222211 1234455555554 46
Q ss_pred ccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 187 GNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 187 G~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
|.+.+ ..++++.+++.+.+++.-
T Consensus 260 G~i~d---~~el~~~a~~~~s~vv~a 282 (1001)
T KOG2040|consen 260 GSVLD---FDELVELAHANGSLVVMA 282 (1001)
T ss_pred CcccC---HHHHHHHhhccCceEEEe
Confidence 77744 566666677877776653
No 477
>PRK07063 short chain dehydrogenase; Provisional
Probab=37.83 E-value=2.5e+02 Score=23.78 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=21.0
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCC
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPG 133 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~ 133 (343)
...+++|.|++..=..+.+.|.+.|..|++..-.
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3456666555554455666677888887766543
No 478
>PRK04210 phosphoenolpyruvate carboxykinase; Provisional
Probab=37.59 E-value=3.6e+02 Score=26.55 Aligned_cols=88 Identities=15% Similarity=0.049 Sum_probs=57.9
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCC-------cchHHHHHhcCceeEE
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF-------PIYELSAAFRHIEVRH 150 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~-------~~~~~~~~~~g~~~~~ 150 (343)
..+.+++-|++... -+.|++|+++.|+.+-...+...+++.|..+-+..+-| ....+.++.....++.
T Consensus 9 ~n~~l~~wv~e~~~-----l~~Pd~v~~cdGS~ee~~~l~~~~v~~G~~~~L~~~k~~~~~~~rsdp~DvARve~rTfI~ 83 (601)
T PRK04210 9 KNPKLLEWVAEVAE-----LTQPDRVVWCDGSEEEYDRLRDQAVEAGTEIKLNPEKRPNSFLARSDPSDVARVEDRTFIC 83 (601)
T ss_pred CCHHHHHHHHHHHH-----hhCCCEEEEeCCCHHHHHHHHHHHHHcCCEeeccCCCCCceeeccCChhhhhhcccceEEe
Confidence 34677777777664 25899999999999999999988888887666654433 2334566665544443
Q ss_pred eecC----CCCCCCCCHHHHHhhhc
Q 019298 151 FDLL----PDKGWEVDLDDIESLAD 171 (343)
Q Consensus 151 ~~~~----~~~~~~~d~~~l~~~~~ 171 (343)
.+-. +.++ -++.+++++.++
T Consensus 84 s~~~~dagp~nn-w~~p~e~~~~l~ 107 (601)
T PRK04210 84 SEKEEDAGPTNN-WMDPAEMRETLK 107 (601)
T ss_pred cCchhhcCCccC-cCCHHHHHHHHH
Confidence 3221 2223 357777777664
No 479
>PRK08339 short chain dehydrogenase; Provisional
Probab=37.47 E-value=2.6e+02 Score=23.90 Aligned_cols=32 Identities=22% Similarity=0.231 Sum_probs=19.4
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCC
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPG 133 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~ 133 (343)
.+++|.|++..=..+.+.|.+.|..|++..-.
T Consensus 10 ~~lItGas~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 10 LAFTTASSKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 44555544444445566677888888776543
No 480
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=37.34 E-value=39 Score=21.95 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=21.7
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCC
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay 215 (343)
+..|.+...+.+++++..+-..+.+.+.+.+..|
T Consensus 25 ~~~~~~~~~s~~eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 25 PKDPGGYDISLEELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp -GGG--TT--HHHHHHHHHHHHHTTSEE--TTEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCcEEecCCEE
Confidence 5566788888999999988887778787777666
No 481
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=37.31 E-value=2e+02 Score=26.10 Aligned_cols=43 Identities=23% Similarity=0.273 Sum_probs=31.1
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD 222 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~ 222 (343)
+.++|.+ |-..+.+...++++-+++.|+-+++|--|++++-+.
T Consensus 45 vwv~P~~--~g~~~~~~~~~~akrak~~Gm~vlldfHYSD~WaDP 87 (332)
T PF07745_consen 45 VWVNPYD--GGYNDLEDVIALAKRAKAAGMKVLLDFHYSDFWADP 87 (332)
T ss_dssp E-SS-TT--TTTTSHHHHHHHHHHHHHTT-EEEEEE-SSSS--BT
T ss_pred eccCCcc--cccCCHHHHHHHHHHHHHCCCeEEEeecccCCCCCC
Confidence 5566655 356788999999999999999999999999987653
No 482
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=37.19 E-value=3.6e+02 Score=25.30 Aligned_cols=95 Identities=15% Similarity=0.153 Sum_probs=49.7
Q ss_pred CcEEEecChHHHHHHHHHHhc---------CCCCeEEEeCCCCcchHH---------HHHhcCceeEEeecCCCCCCCCC
Q 019298 101 NDVFVTSGCTQAIDVAMALLS---------RPGANILLPRPGFPIYEL---------SAAFRHIEVRHFDLLPDKGWEVD 162 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~---------~~gd~vl~~~p~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~d 162 (343)
+-|++++|+++.....+.-+. +++|.|++..+.++++.. .....|.++.. ... -....+
T Consensus 287 ~~vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~h--~SgHa~ 363 (422)
T TIGR00649 287 NYLIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIK-RIH--VSGHAS 363 (422)
T ss_pred cEEEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEe-ceE--ecCCCC
Confidence 456677776544433333332 367899999888877651 12224555432 111 112345
Q ss_pred HHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298 163 LDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (343)
Q Consensus 163 ~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 206 (343)
-++|++.++. +|+.++-.+. -. ..+.+.++++++.|
T Consensus 364 ~~dl~~~i~~~~Pk~~ipvHg-----e~---~~~~~~~~~a~~~g 400 (422)
T TIGR00649 364 QEDHKLLLRLLKPKYIIPVHG-----EY---RMLINHTKLAEEEG 400 (422)
T ss_pred HHHHHHHHHHhCCCEEEecCC-----cH---HHHHHHHHHHHHcC
Confidence 5666655442 4665553332 11 45666777776654
No 483
>PRK05884 short chain dehydrogenase; Provisional
Probab=36.94 E-value=2.3e+02 Score=23.56 Aligned_cols=31 Identities=23% Similarity=0.184 Sum_probs=19.4
Q ss_pred EEEecChHHHHHHHHHHhcCCCCeEEEeCCC
Q 019298 103 VFVTSGCTQAIDVAMALLSRPGANILLPRPG 133 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~ 133 (343)
+++|.|+...=..+.+.|.+.|..|++....
T Consensus 3 vlItGas~giG~~ia~~l~~~g~~v~~~~r~ 33 (223)
T PRK05884 3 VLVTGGDTDLGRTIAEGFRNDGHKVTLVGAR 33 (223)
T ss_pred EEEEeCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5666555554455666677788777766544
No 484
>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair]
Probab=36.93 E-value=47 Score=30.82 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHHHhhc-----CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc
Q 019298 190 YSYQHLQKLAETANKL-----KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR 246 (343)
Q Consensus 190 ~~~~~l~~l~~~~~~~-----~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 246 (343)
...++++++.+-+++. ..++++||+|..-- .....+..+-+.+.++.|+..+-.
T Consensus 84 ~gvkdlr~i~e~a~~~~~~gr~tiLflDEIHRfnK---~QQD~lLp~vE~G~iilIGATTEN 142 (436)
T COG2256 84 SGVKDLREIIEEARKNRLLGRRTILFLDEIHRFNK---AQQDALLPHVENGTIILIGATTEN 142 (436)
T ss_pred ccHHHHHHHHHHHHHHHhcCCceEEEEehhhhcCh---hhhhhhhhhhcCCeEEEEeccCCC
Confidence 3458888888888543 58999999998632 122223334455678888877765
No 485
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=36.82 E-value=2.4e+02 Score=27.21 Aligned_cols=67 Identities=6% Similarity=-0.039 Sum_probs=37.5
Q ss_pred HHhcC-ceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhc--CcEEEEccCCC
Q 019298 141 AAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYG 216 (343)
Q Consensus 141 ~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~ 216 (343)
++..| .++..++... ..++.+++.+.+.. ++.+|.++.- | .+.....++++.+++. ++.+|+=..+.
T Consensus 32 L~~~G~~~V~iiD~~~---~~~~~~~~~~~l~~~~pdvVgis~~---t---~~~~~a~~~~~~~k~~~P~~~iV~GG~h~ 102 (497)
T TIGR02026 32 LLDAGYHDVTFLDAMT---GPLTDEKLVERLRAHCPDLVLITAI---T---PAIYIACETLKFARERLPNAIIVLGGIHP 102 (497)
T ss_pred HHhcCCcceEEecccc---cCCCHHHHHHHHHhcCcCEEEEecC---c---ccHHHHHHHHHHHHHHCCCCEEEEcCCCc
Confidence 34556 4666665432 23456666665543 5666666421 1 2335567777777765 67776655543
No 486
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=36.76 E-value=48 Score=32.39 Aligned_cols=29 Identities=34% Similarity=0.416 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
+.++++++++.|+++|+-||+|-+|.+..
T Consensus 158 ~~~e~k~lV~~aH~~Gi~VilD~V~NH~~ 186 (542)
T TIGR02402 158 GPDDLKALVDAAHGLGLGVILDVVYNHFG 186 (542)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCCCC
Confidence 34899999999999999999999998754
No 487
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=36.37 E-value=1.4e+02 Score=26.10 Aligned_cols=14 Identities=21% Similarity=0.195 Sum_probs=7.0
Q ss_pred HHHHHHHHHHhhcC
Q 019298 193 QHLQKLAETANKLK 206 (343)
Q Consensus 193 ~~l~~l~~~~~~~~ 206 (343)
++..++++.+++.|
T Consensus 82 ~~~~~~a~~a~~~G 95 (284)
T cd00950 82 AEAIELTKRAEKAG 95 (284)
T ss_pred HHHHHHHHHHHHcC
Confidence 44455555555543
No 488
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=36.26 E-value=1.5e+02 Score=26.17 Aligned_cols=45 Identities=13% Similarity=0.047 Sum_probs=22.7
Q ss_pred CCCCHHHHHhhhc----CCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 159 WEVDLDDIESLAD----QNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 159 ~~~d~~~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
..+|.+.+++.++ .+...++ ...++--+..++.+|++++++.+.+
T Consensus 16 g~iD~~~l~~l~~~l~~~Gv~gi~-v~GstGE~~~Ls~eEr~~l~~~~~~ 64 (289)
T cd00951 16 GSFDEDAYRAHVEWLLSYGAAALF-AAGGTGEFFSLTPDEYAQVVRAAVE 64 (289)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEE-ECcCCcCcccCCHHHHHHHHHHHHH
Confidence 4566666665443 2333333 2333444455666666666665544
No 489
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=36.02 E-value=4.4e+02 Score=26.05 Aligned_cols=101 Identities=14% Similarity=0.121 Sum_probs=57.6
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEe-CCCCcch------HHHHHhcCc-ee-EEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298 107 SGCTQAIDVAMALLSRPGANILLP-RPGFPIY------ELSAAFRHI-EV-RHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (343)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vl~~-~p~~~~~------~~~~~~~g~-~~-~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 177 (343)
.+-..+...+..++.+ +.+|++. +.--.+. ...++..|. .+ .++|-...++++++.+.+++....+.+++
T Consensus 53 ~~m~~a~~ri~~ai~~-~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~~~~Li 131 (575)
T PRK11070 53 SGIEKAVELLYNALRE-GTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHARGAQLI 131 (575)
T ss_pred hCHHHHHHHHHHHHHC-CCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHhcCCCEE
Confidence 4555666665555533 3344333 3222222 223344555 33 33444446789999999998777677777
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~ 217 (343)
+.+.... +. .+.++.|+++|+-+|+=|-|..
T Consensus 132 ItvD~Gi--~~-------~e~i~~a~~~gidvIVtDHH~~ 162 (575)
T PRK11070 132 VTVDNGI--SS-------HAGVAHAHALGIPVLVTDHHLP 162 (575)
T ss_pred EEEcCCc--CC-------HHHHHHHHHCCCCEEEECCCCC
Confidence 7766422 11 2334567788988888776643
No 490
>PF04989 CmcI: Cephalosporin hydroxylase; InterPro: IPR007072 This entry contains Rhamnosyl O-methyltransferase which catalyses the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD) []. Members of this family are about 220 amino acids long. It also includes the CmcI protein O85726 from SWISSPROT, which is presumed to represent the cephalosporin-7--hydroxylase []. However this has not been experimentally verified.; GO: 0008168 methyltransferase activity, 0008610 lipid biosynthetic process; PDB: 2BR4_B 2BR3_E 2BR5_E 2BM8_J 2BM9_E.
Probab=35.90 E-value=1.4e+02 Score=24.90 Aligned_cols=112 Identities=13% Similarity=0.145 Sum_probs=52.3
Q ss_pred CCCCcEE---EecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc---CceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 98 LTPNDVF---VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR---HIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 98 ~~~~~i~---~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
+.|+.|+ +..|+|..+...+..+.....+|+-.+..-......+... .-++..+. +...|++.+.+...
T Consensus 31 ~kPd~IIE~Gi~~GGSli~~A~ml~~~~~~~~VigiDIdir~~~~~a~e~hp~~~rI~~i~-----Gds~d~~~~~~v~~ 105 (206)
T PF04989_consen 31 LKPDLIIETGIAHGGSLIFWASMLELLGGKGKVIGIDIDIRPHNRKAIESHPMSPRITFIQ-----GDSIDPEIVDQVRE 105 (206)
T ss_dssp H--SEEEEE--TTSHHHHHHHHHHHHTT---EEEEEES-GTT--S-GGGG----TTEEEEE-----S-SSSTHHHHTSGS
T ss_pred hCCCeEEEEecCCCchHHHHHHHHHHhCCCceEEEEeCCcchhchHHHhhccccCceEEEE-----CCCCCHHHHHHHHH
Confidence 4788776 5678888888777666644456665555322222221211 12333343 22357777766432
Q ss_pred ---CCceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc
Q 019298 172 ---QNTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217 (343)
Q Consensus 172 ---~~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~ 217 (343)
...+.+++-.. |.-.=+. .+++.+..+...-+-+||+|-....
T Consensus 106 ~~~~~~~vlVilDs~H~~~hvl---~eL~~y~plv~~G~Y~IVeDt~~~~ 152 (206)
T PF04989_consen 106 LASPPHPVLVILDSSHTHEHVL---AELEAYAPLVSPGSYLIVEDTIIED 152 (206)
T ss_dssp S----SSEEEEESS----SSHH---HHHHHHHHT--TT-EEEETSHHHHH
T ss_pred hhccCCceEEEECCCccHHHHH---HHHHHhCccCCCCCEEEEEeccccc
Confidence 23344444444 3322223 6788888888886666777765443
No 491
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=35.81 E-value=3.5e+02 Score=24.92 Aligned_cols=90 Identities=19% Similarity=0.228 Sum_probs=50.7
Q ss_pred CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEee
Q 019298 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152 (343)
Q Consensus 73 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~ 152 (343)
|-...|.|+.+..+.+.... -+-....... |+-.|++.+|+|.... +.
T Consensus 231 ~K~sEGdPeVKsr~Rq~~re------------------~a~~rm~~~V--p~AdvVItNPTH~AVA------------lk 278 (363)
T COG1377 231 YKQSEGDPEVKSRIRQMQRE------------------IARRRMMSDV--PKADVVITNPTHYAVA------------LK 278 (363)
T ss_pred HhhccCChhhhHHHHHHHHH------------------HHHHHHHhhC--CCCCEEeeCcCceeee------------ee
Confidence 44467888888877776632 1111112222 6678889999996421 11
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~ 217 (343)
++++.. .-|.++. -|+. .---+|.+++++||+.+++|-.-+-
T Consensus 279 Y~~~~~-------------~AP~VvA-------KG~d---~~AlkIreiA~e~~Ipi~enppLAR 320 (363)
T COG1377 279 YDPEKM-------------PAPVVVA-------KGVD---LVALKIREIAKEHGIPIIENPPLAR 320 (363)
T ss_pred eccccC-------------CCCEEEE-------eCCc---HHHHHHHHHHHHcCCceecChHHHH
Confidence 122111 0133332 4544 4456777888899999988865443
No 492
>PLN02417 dihydrodipicolinate synthase
Probab=35.49 E-value=3e+02 Score=24.11 Aligned_cols=87 Identities=16% Similarity=0.163 Sum_probs=46.9
Q ss_pred cEEEecC---hHHHHHHHHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298 102 DVFVTSG---CTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (343)
Q Consensus 102 ~i~~~~g---~~~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 177 (343)
.|++..| ..+++..+-.+ .+-| |.|++..|.|.....-. -.+.+++..+.. +++
T Consensus 72 pvi~gv~~~~t~~~i~~a~~a-~~~Gadav~~~~P~y~~~~~~~--------------------i~~~f~~va~~~-pi~ 129 (280)
T PLN02417 72 KVIGNTGSNSTREAIHATEQG-FAVGMHAALHINPYYGKTSQEG--------------------LIKHFETVLDMG-PTI 129 (280)
T ss_pred cEEEECCCccHHHHHHHHHHH-HHcCCCEEEEcCCccCCCCHHH--------------------HHHHHHHHHhhC-CEE
Confidence 3455444 44555554333 3344 78888888774321100 012222222223 666
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccC
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~a 214 (343)
+.++|. .||..++.+.+++|++ -.++.-|=|..
T Consensus 130 lYn~P~-~tg~~l~~~~l~~l~~---~pni~giKdss 162 (280)
T PLN02417 130 IYNVPG-RTGQDIPPEVIFKIAQ---HPNFAGVKECT 162 (280)
T ss_pred EEEChh-HhCcCCCHHHHHHHhc---CCCEEEEEeCC
Confidence 767766 5788999888887763 23566555543
No 493
>PRK08862 short chain dehydrogenase; Provisional
Probab=35.39 E-value=2.2e+02 Score=23.89 Aligned_cols=65 Identities=17% Similarity=0.133 Sum_probs=34.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
..+++|.+++..=..+.+.|.+.|..|++..-.-....... ...+.++..+..+. -|.+++++.+
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~-----~~~~~~~~~~ 73 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKD-----FSQESIRHLF 73 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccC-----CCHHHHHHHH
Confidence 34555555554445556667788988887655443332222 22355555555432 2445555433
No 494
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=35.33 E-value=2.9e+02 Score=25.94 Aligned_cols=93 Identities=13% Similarity=0.176 Sum_probs=57.7
Q ss_pred EEecChHHHHHHHHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298 104 FVTSGCTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182 (343)
Q Consensus 104 ~~~~g~~~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p 182 (343)
++.-|+.+....+++.|...| ..|.+..-++..-..++...|..+. .++++...+.+ ..+++ +..
T Consensus 181 vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~------------~l~el~~~l~~-~DvVi-ssT 246 (414)
T COG0373 181 VLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV------------ALEELLEALAE-ADVVI-SST 246 (414)
T ss_pred EEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee------------cHHHHHHhhhh-CCEEE-Eec
Confidence 344455556666778888777 7888999999888888888884443 34555555542 33443 333
Q ss_pred CCCcccccCHHHHHHHHHHHhhcCcEEEEccC
Q 019298 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~a 214 (343)
+.|+- +++.+.+++..+.-+ . .+++|-+
T Consensus 247 sa~~~-ii~~~~ve~a~~~r~--~-~livDia 274 (414)
T COG0373 247 SAPHP-IITREMVERALKIRK--R-LLIVDIA 274 (414)
T ss_pred CCCcc-ccCHHHHHHHHhccc--C-eEEEEec
Confidence 33332 355566666655322 2 8889876
No 495
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=35.30 E-value=86 Score=23.67 Aligned_cols=49 Identities=18% Similarity=0.287 Sum_probs=24.1
Q ss_pred CCCHHH-HHhhhcCCceEEEEeCCCCCcccc-cCHHHH---HHHHHHHhhcCcEE
Q 019298 160 EVDLDD-IESLADQNTVALVIINPGNPCGNV-YSYQHL---QKLAETANKLKTLV 209 (343)
Q Consensus 160 ~~d~~~-l~~~~~~~~~~i~~~~p~nptG~~-~~~~~l---~~l~~~~~~~~~~~ 209 (343)
.+++.+ ++.++..+...+++. -|.|+|.. .|.+++ ++|.+.|+..++-+
T Consensus 50 ~v~~R~I~~~al~~~A~~vIl~-HNHPsG~~~PS~~D~~~T~~L~~~~~~l~I~l 103 (123)
T PF04002_consen 50 PVDPREIFRRALRLNASSVILA-HNHPSGDPEPSDADIALTRRLKKAARLLGIEL 103 (123)
T ss_dssp GCSHHHHHHHHHHTT-SEEEEE-EE-TTS--S--HHHHHHHHHHHHHHHHHT-EE
T ss_pred cccHHHHHHHHHhhCCceEEEE-EEcCCCCCCCCHhHHHHHHHHHHHHHHcCCee
Confidence 345555 455666555554432 13355554 344566 77888887766544
No 496
>PLN03244 alpha-amylase; Provisional
Probab=34.86 E-value=63 Score=32.90 Aligned_cols=31 Identities=23% Similarity=0.238 Sum_probs=27.5
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccccC
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFG 221 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~ 221 (343)
+.++++++++.|+++|+-||.|-+|.++.-+
T Consensus 439 TPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 439 TPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 4699999999999999999999999886543
No 497
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=34.76 E-value=78 Score=26.85 Aligned_cols=65 Identities=18% Similarity=0.175 Sum_probs=38.0
Q ss_pred HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 138 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
...++..|..+..+ .+...+..--.+.++.++..++.+|++.. ..++. ...+++.|++.|+.+|.
T Consensus 21 ~~~a~~~g~~~~~~-~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~-~~~~~-------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 21 KAAAKELGYEVEIV-FDAQNDPEEQIEQIEQAISQGVDGIIVSP-VDPDS-------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHTCEEEEE-EESTTTHHHHHHHHHHHHHTTESEEEEES-SSTTT-------THHHHHHHHHTTSEEEE
T ss_pred HHHHHHcCCEEEEe-CCCCCCHHHHHHHHHHHHHhcCCEEEecC-CCHHH-------HHHHHHHHhhcCceEEE
Confidence 44666778887775 12212212225556677777888877544 33322 34455567778998776
No 498
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=34.68 E-value=2.7e+02 Score=23.17 Aligned_cols=53 Identities=23% Similarity=0.102 Sum_probs=27.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeec
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 153 (343)
..+++|.++...=..+...|.+.|..|.+...............+.++..+..
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 59 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPA 59 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEc
Confidence 34555544444444456667788887776654443333333333444444443
No 499
>cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.
Probab=34.52 E-value=1.3e+02 Score=27.19 Aligned_cols=97 Identities=18% Similarity=0.171 Sum_probs=49.6
Q ss_pred cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCc---------cccc
Q 019298 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPC---------GNVY 190 (343)
Q Consensus 121 ~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~npt---------G~~~ 190 (343)
.+.|..+++.+..+......++..|.+...+-+...+...--++.++..++. ..++|++-+...-. |...
T Consensus 80 ~~~g~~~vyId~E~~~~~~~a~~lGvd~~~l~v~~p~~~eq~l~i~~~li~s~~~~lIVIDSvaal~~~~E~~~~~~~~~ 159 (325)
T cd00983 80 QKLGGTVAFIDAEHALDPVYAKKLGVDLDNLLISQPDTGEQALEIADSLVRSGAVDLIVVDSVAALVPKAEIEGEMGDSH 159 (325)
T ss_pred HHcCCCEEEECccccHHHHHHHHcCCCHHHheecCCCCHHHHHHHHHHHHhccCCCEEEEcchHhhcccccccccccccc
Confidence 3566777777777765566667777654433322211100012223333333 56667765543221 1100
Q ss_pred -------CHHHHHHHHHHHhhcCcEEEE-ccCCCc
Q 019298 191 -------SYQHLQKLAETANKLKTLVIA-DEVYGH 217 (343)
Q Consensus 191 -------~~~~l~~l~~~~~~~~~~~i~-D~ay~~ 217 (343)
=...+..|..+++++++.+|+ .+++..
T Consensus 160 ~~~qaR~l~~~Lr~L~~~~~k~~~~vI~tNQvr~~ 194 (325)
T cd00983 160 VGLQARLMSQALRKLTGSINKSNTTVIFINQLREK 194 (325)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCEEEEEEccccc
Confidence 013567788888999876654 555443
No 500
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=34.23 E-value=46 Score=31.89 Aligned_cols=28 Identities=21% Similarity=0.176 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+++++|++.|+++|+.||+|-+.-+..
T Consensus 80 ~~dl~~Li~~~H~~Gi~vi~D~V~NH~~ 107 (479)
T PRK09441 80 KEELLNAIDALHENGIKVYADVVLNHKA 107 (479)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 4899999999999999999999988754
Done!