Query 019298
Match_columns 343
No_of_seqs 167 out of 1928
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 13:55:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019298.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019298hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b5p_A Protein (aspartate amin 100.0 4E-47 1.4E-51 350.1 32.3 321 1-343 1-327 (385)
2 3k7y_A Aspartate aminotransfer 100.0 1.5E-46 5.2E-51 347.1 32.3 326 3-343 4-360 (405)
3 3dyd_A Tyrosine aminotransfera 100.0 2.6E-46 9E-51 349.3 31.4 321 16-342 38-360 (427)
4 1j32_A Aspartate aminotransfer 100.0 1.7E-44 5.9E-49 332.7 30.1 324 1-343 1-328 (388)
5 4f4e_A Aromatic-amino-acid ami 100.0 1.4E-44 4.8E-49 336.9 28.0 328 1-343 22-376 (420)
6 1gd9_A Aspartate aminotransfer 100.0 1.2E-43 4E-48 327.2 31.9 319 1-343 1-325 (389)
7 2x5d_A Probable aminotransfera 100.0 7.1E-44 2.4E-48 331.3 30.1 324 1-343 8-335 (412)
8 3fvs_A Kynurenine--oxoglutarat 100.0 8.3E-44 2.8E-48 331.7 29.9 319 1-343 4-344 (422)
9 1bw0_A TAT, protein (tyrosine 100.0 1.5E-43 5.1E-48 329.4 31.0 305 34-342 32-349 (416)
10 3b46_A Aminotransferase BNA3; 100.0 1E-43 3.4E-48 333.7 29.0 295 34-343 56-367 (447)
11 3h14_A Aminotransferase, class 100.0 4.6E-43 1.6E-47 323.5 31.4 316 1-343 3-320 (391)
12 3aow_A Putative uncharacterize 100.0 2.3E-43 8E-48 331.0 28.8 315 3-343 54-383 (448)
13 3e2y_A Kynurenine-oxoglutarate 100.0 3.5E-43 1.2E-47 326.2 28.7 316 4-343 2-337 (410)
14 3ele_A Amino transferase; RER0 100.0 5.5E-43 1.9E-47 323.6 29.3 325 1-343 2-340 (398)
15 1u08_A Hypothetical aminotrans 100.0 2.9E-42 9.9E-47 317.6 33.7 317 1-343 6-326 (386)
16 2o0r_A RV0858C (N-succinyldiam 100.0 2.1E-42 7.3E-47 321.2 31.6 318 1-343 1-323 (411)
17 3jtx_A Aminotransferase; NP_28 100.0 1.6E-42 5.5E-47 320.2 29.4 318 4-343 3-333 (396)
18 7aat_A Aspartate aminotransfer 100.0 1.1E-42 3.6E-47 322.1 28.1 324 7-343 7-357 (401)
19 2o1b_A Aminotransferase, class 100.0 5.1E-43 1.7E-47 324.7 25.5 294 34-343 46-343 (404)
20 1o4s_A Aspartate aminotransfer 100.0 4.1E-42 1.4E-46 317.1 29.5 317 4-343 15-333 (389)
21 3tcm_A Alanine aminotransferas 100.0 8.3E-42 2.8E-46 324.6 32.2 301 36-342 65-420 (500)
22 1xi9_A Putative transaminase; 100.0 2.2E-42 7.4E-47 320.7 27.0 326 2-342 11-340 (406)
23 2dou_A Probable N-succinyldiam 100.0 3.3E-42 1.1E-46 316.2 27.6 293 34-343 24-319 (376)
24 1yiz_A Kynurenine aminotransfe 100.0 8.5E-42 2.9E-46 318.8 30.6 318 2-343 14-352 (429)
25 3nra_A Aspartate aminotransfer 100.0 4E-42 1.4E-46 318.6 27.9 296 36-343 40-344 (407)
26 3fsl_A Aromatic-amino-acid ami 100.0 3.3E-42 1.1E-46 318.3 26.9 323 6-343 4-354 (397)
27 3ihj_A Alanine aminotransferas 100.0 1.1E-41 3.6E-46 323.4 31.0 300 36-342 64-419 (498)
28 3t18_A Aminotransferase class 100.0 5.9E-42 2E-46 318.4 28.5 329 2-343 7-363 (413)
29 3fdb_A Beta C-S lyase, putativ 100.0 5.2E-42 1.8E-46 314.7 27.3 291 34-343 22-316 (377)
30 2r2n_A Kynurenine/alpha-aminoa 100.0 1.6E-42 5.4E-47 323.5 22.8 317 2-343 6-360 (425)
31 2z61_A Probable aspartate amin 100.0 7.4E-41 2.5E-45 306.5 33.2 308 3-343 2-313 (370)
32 1iay_A ACC synthase 2, 1-amino 100.0 3.8E-41 1.3E-45 314.4 30.1 326 3-343 2-360 (428)
33 3kax_A Aminotransferase, class 100.0 3.1E-41 1.1E-45 310.1 28.9 295 34-343 23-324 (383)
34 3meb_A Aspartate aminotransfer 100.0 1.8E-41 6.2E-46 318.3 27.5 329 1-343 22-397 (448)
35 4h51_A Aspartate aminotransfer 100.0 9.4E-42 3.2E-46 315.3 24.9 332 1-343 15-372 (420)
36 1c7n_A Cystalysin; transferase 100.0 3.6E-41 1.2E-45 311.6 28.5 294 35-343 31-332 (399)
37 3dzz_A Putative pyridoxal 5'-p 100.0 7.7E-41 2.6E-45 308.3 30.2 295 34-343 26-328 (391)
38 1ajs_A Aspartate aminotransfer 100.0 2E-41 6.7E-46 314.7 25.9 329 2-343 4-365 (412)
39 1yaa_A Aspartate aminotransfer 100.0 9.4E-42 3.2E-46 316.9 23.7 331 1-343 2-365 (412)
40 1v2d_A Glutamine aminotransfer 100.0 1E-40 3.4E-45 306.8 29.9 308 1-343 1-314 (381)
41 3g0t_A Putative aminotransfera 100.0 3.2E-41 1.1E-45 315.6 27.0 311 16-343 27-378 (437)
42 3qgu_A LL-diaminopimelate amin 100.0 6.8E-41 2.3E-45 314.6 29.0 297 33-343 67-381 (449)
43 2zc0_A Alanine glyoxylate tran 100.0 1.8E-40 6.2E-45 307.7 31.5 320 3-343 7-341 (407)
44 3rq1_A Aminotransferase class 100.0 4.2E-41 1.5E-45 313.1 27.0 327 4-343 10-365 (418)
45 3ezs_A Aminotransferase ASPB; 100.0 5.7E-41 1.9E-45 307.8 26.9 305 10-343 4-316 (376)
46 4eu1_A Mitochondrial aspartate 100.0 1E-41 3.4E-46 316.5 21.2 322 3-343 16-365 (409)
47 2gb3_A Aspartate aminotransfer 100.0 1.3E-40 4.4E-45 309.0 28.6 317 3-343 16-335 (409)
48 1vp4_A Aminotransferase, putat 100.0 3.2E-41 1.1E-45 314.7 24.6 316 3-343 21-356 (425)
49 4dq6_A Putative pyridoxal phos 100.0 2.6E-40 8.8E-45 304.8 30.2 294 34-343 31-332 (391)
50 1d2f_A MALY protein; aminotran 100.0 1.7E-40 6E-45 306.1 28.7 293 35-343 28-328 (390)
51 3ei9_A LL-diaminopimelate amin 100.0 5.4E-40 1.8E-44 307.0 29.5 296 33-343 54-369 (432)
52 3l8a_A METC, putative aminotra 100.0 4.2E-40 1.4E-44 306.8 28.2 295 34-343 60-361 (421)
53 2q7w_A Aspartate aminotransfer 100.0 5.1E-41 1.7E-45 310.2 21.8 328 5-343 3-353 (396)
54 3piu_A 1-aminocyclopropane-1-c 100.0 7.4E-40 2.5E-44 306.3 28.5 304 25-343 28-365 (435)
55 2x5f_A Aspartate_tyrosine_phen 100.0 9.2E-41 3.1E-45 312.0 20.8 295 35-343 47-375 (430)
56 3ffh_A Histidinol-phosphate am 100.0 3.9E-39 1.3E-43 294.2 31.0 281 34-343 31-312 (363)
57 2zyj_A Alpha-aminodipate amino 100.0 5.8E-40 2E-44 303.4 24.5 310 3-343 10-331 (397)
58 3asa_A LL-diaminopimelate amin 100.0 2.3E-39 7.8E-44 299.8 27.5 323 1-342 1-331 (400)
59 3get_A Histidinol-phosphate am 100.0 1.8E-39 6.2E-44 296.6 26.4 281 34-343 29-313 (365)
60 2ay1_A Aroat, aromatic amino a 100.0 1.9E-40 6.5E-45 306.2 20.1 321 5-343 3-350 (394)
61 3ly1_A Putative histidinol-pho 100.0 2.1E-39 7E-44 295.0 26.4 282 33-343 14-299 (354)
62 3euc_A Histidinol-phosphate am 100.0 1.2E-38 4.1E-43 291.4 31.1 280 34-343 29-313 (367)
63 1lc5_A COBD, L-threonine-O-3-p 100.0 3.9E-38 1.3E-42 287.8 30.9 279 34-342 23-303 (364)
64 1fg7_A Histidinol phosphate am 100.0 1.7E-38 5.8E-43 289.5 28.0 272 35-343 29-304 (356)
65 3ftb_A Histidinol-phosphate am 100.0 1.1E-37 3.9E-42 284.1 29.9 277 34-342 25-303 (361)
66 3g7q_A Valine-pyruvate aminotr 100.0 6.8E-39 2.3E-43 297.9 21.4 321 1-343 2-346 (417)
67 3if2_A Aminotransferase; YP_26 100.0 1E-38 3.6E-43 299.2 22.2 323 1-343 2-372 (444)
68 3ppl_A Aspartate aminotransfer 100.0 5.4E-39 1.9E-43 299.7 19.0 290 34-343 32-357 (427)
69 3b1d_A Betac-S lyase; HET: PLP 100.0 8.8E-42 3E-46 315.1 0.0 293 36-343 32-332 (392)
70 3d6k_A Putative aminotransfera 100.0 1.4E-38 4.6E-43 296.6 20.8 288 36-343 33-355 (422)
71 3cq5_A Histidinol-phosphate am 100.0 7.8E-37 2.7E-41 279.7 29.5 281 37-343 32-317 (369)
72 2zy4_A L-aspartate beta-decarb 100.0 1.9E-37 6.4E-42 296.7 25.7 306 16-343 82-446 (546)
73 3op7_A Aminotransferase class 100.0 2.2E-37 7.4E-42 283.9 24.6 264 60-342 47-312 (375)
74 3ez1_A Aminotransferase MOCR f 100.0 1.9E-37 6.4E-42 289.0 19.5 290 34-343 24-352 (423)
75 3fkd_A L-threonine-O-3-phospha 100.0 8.6E-37 3E-41 277.4 22.4 269 34-342 14-283 (350)
76 3f6t_A Aspartate aminotransfer 100.0 5.3E-37 1.8E-41 293.3 21.8 291 36-343 104-449 (533)
77 3p1t_A Putative histidinol-pho 100.0 2.5E-35 8.6E-40 266.1 29.3 268 34-341 15-282 (337)
78 1uu1_A Histidinol-phosphate am 100.0 8.8E-36 3E-40 269.2 23.9 269 35-343 19-288 (335)
79 3hdo_A Histidinol-phosphate am 100.0 4.8E-35 1.6E-39 267.0 27.8 273 34-343 25-300 (360)
80 3bwn_A AT1G70560, L-tryptophan 100.0 6.2E-36 2.1E-40 275.8 17.7 274 34-343 21-332 (391)
81 2hox_A ALLIIN lyase 1; cystein 100.0 1.1E-35 3.8E-40 277.0 15.6 273 34-343 55-368 (427)
82 3a2b_A Serine palmitoyltransfe 100.0 2.9E-32 9.9E-37 251.8 25.9 280 34-343 42-330 (398)
83 1t3i_A Probable cysteine desul 100.0 5.8E-30 2E-34 237.7 24.6 267 35-334 27-333 (420)
84 1bs0_A Protein (8-amino-7-oxon 100.0 5.8E-29 2E-33 228.5 28.0 273 34-342 38-324 (384)
85 1e5e_A MGL, methionine gamma-l 100.0 2.9E-29 9.8E-34 232.2 25.7 244 38-324 21-280 (404)
86 1kmj_A Selenocysteine lyase; p 100.0 8.2E-30 2.8E-34 235.5 21.8 274 34-340 21-337 (406)
87 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 5.3E-30 1.8E-34 234.2 20.0 275 34-343 6-307 (371)
88 3tqx_A 2-amino-3-ketobutyrate 100.0 2.3E-29 7.9E-34 232.2 24.2 275 34-342 42-333 (399)
89 1elu_A L-cysteine/L-cystine C- 100.0 1.8E-29 6E-34 232.1 19.6 275 35-340 15-334 (390)
90 2dr1_A PH1308 protein, 386AA l 100.0 1E-28 3.4E-33 226.8 22.9 263 51-343 29-320 (386)
91 2w8t_A SPT, serine palmitoyltr 100.0 2.2E-28 7.7E-33 227.9 25.3 275 34-342 63-352 (427)
92 2eh6_A Acoat, acetylornithine 100.0 4.6E-29 1.6E-33 228.4 20.1 279 34-343 27-325 (375)
93 1svv_A Threonine aldolase; str 100.0 1.5E-28 5.1E-33 223.4 23.0 279 34-342 12-303 (359)
94 1vjo_A Alanine--glyoxylate ami 100.0 1E-28 3.4E-33 227.6 21.8 260 51-341 43-332 (393)
95 1fc4_A 2-amino-3-ketobutyrate 100.0 1.1E-28 3.7E-33 228.0 21.2 275 33-343 43-335 (401)
96 1eg5_A Aminotransferase; PLP-d 100.0 9.3E-29 3.2E-33 226.7 20.4 263 38-333 3-286 (384)
97 3lvm_A Cysteine desulfurase; s 100.0 3.6E-28 1.2E-32 226.0 22.5 268 32-335 18-313 (423)
98 3kki_A CAI-1 autoinducer synth 100.0 9.7E-28 3.3E-32 222.4 25.2 273 34-342 58-341 (409)
99 2bwn_A 5-aminolevulinate synth 100.0 3.2E-28 1.1E-32 224.9 21.8 275 34-343 45-337 (401)
100 3f9t_A TDC, L-tyrosine decarbo 100.0 1.4E-27 4.7E-32 219.7 25.2 272 51-342 40-344 (397)
101 1sff_A 4-aminobutyrate aminotr 100.0 1.4E-28 4.6E-33 229.2 17.7 285 34-343 40-359 (426)
102 1b9h_A AHBA synthase, protein 100.0 1.3E-27 4.4E-32 219.9 22.9 255 55-343 17-297 (388)
103 2po3_A 4-dehydrase; external a 100.0 2.8E-27 9.6E-32 220.3 24.8 257 39-336 20-292 (424)
104 3cai_A Possible aminotransfera 100.0 1.6E-27 5.3E-32 220.5 22.5 272 36-342 26-341 (406)
105 1v72_A Aldolase; PLP-dependent 100.0 5.1E-28 1.8E-32 219.6 18.8 279 34-343 6-301 (356)
106 2ez2_A Beta-tyrosinase, tyrosi 100.0 4.7E-27 1.6E-31 220.8 25.4 306 3-342 6-348 (456)
107 2rfv_A Methionine gamma-lyase; 100.0 2.2E-27 7.4E-32 219.3 22.2 249 38-324 23-281 (398)
108 2eo5_A 419AA long hypothetical 100.0 4.1E-27 1.4E-31 218.8 23.6 284 34-343 41-363 (419)
109 1jg8_A L-ALLO-threonine aldola 100.0 7.4E-28 2.5E-32 218.1 17.8 273 34-343 2-290 (347)
110 4eb5_A Probable cysteine desul 100.0 2.3E-27 7.9E-32 217.4 20.8 267 51-342 10-295 (382)
111 2huf_A Alanine glyoxylate amin 100.0 2.8E-27 9.7E-32 217.8 20.6 269 34-342 17-321 (393)
112 2z9v_A Aspartate aminotransfer 100.0 5.5E-27 1.9E-31 215.8 21.8 268 37-342 9-309 (392)
113 4adb_A Succinylornithine trans 100.0 1.4E-27 4.8E-32 220.8 17.7 259 34-325 38-322 (406)
114 2ord_A Acoat, acetylornithine 100.0 2.7E-28 9.1E-33 225.2 12.5 277 34-342 39-341 (397)
115 3ruy_A Ornithine aminotransfer 100.0 5.7E-27 1.9E-31 215.9 21.1 275 34-340 35-339 (392)
116 1iug_A Putative aspartate amin 100.0 3.1E-27 1.1E-31 214.2 18.8 258 51-343 10-289 (352)
117 2oga_A Transaminase; PLP-depen 100.0 7.6E-27 2.6E-31 215.7 21.6 264 35-341 30-311 (399)
118 4hvk_A Probable cysteine desul 99.9 3E-26 1E-30 209.6 24.4 258 51-335 10-285 (382)
119 1m32_A 2-aminoethylphosphonate 99.9 1E-26 3.5E-31 211.6 20.1 271 36-343 4-305 (366)
120 3zrp_A Serine-pyruvate aminotr 99.9 8.2E-27 2.8E-31 213.8 19.5 258 51-342 11-305 (384)
121 2aeu_A Hypothetical protein MJ 99.9 4.5E-26 1.5E-30 208.6 24.2 263 34-341 26-304 (374)
122 1s0a_A Adenosylmethionine-8-am 99.9 5.6E-26 1.9E-30 211.8 24.8 284 34-342 42-369 (429)
123 3vax_A Putative uncharacterize 99.9 2.9E-27 9.8E-32 218.3 15.6 275 33-335 17-312 (400)
124 3i4j_A Aminotransferase, class 99.9 2.9E-26 9.8E-31 213.8 21.9 286 34-342 28-356 (430)
125 1vef_A Acetylornithine/acetyl- 99.9 9.2E-27 3.2E-31 214.7 18.1 284 34-342 44-342 (395)
126 2yrr_A Aminotransferase, class 99.9 9.8E-27 3.4E-31 210.7 17.5 259 51-342 9-292 (353)
127 2ch1_A 3-hydroxykynurenine tra 99.9 3.1E-26 1E-30 211.1 20.9 259 51-342 27-321 (396)
128 3a9z_A Selenocysteine lyase; P 99.9 2.1E-26 7.3E-31 214.7 19.6 260 35-329 17-329 (432)
129 1ibj_A CBL, cystathionine beta 99.9 2.1E-26 7.2E-31 216.0 19.4 272 34-342 88-383 (464)
130 3lws_A Aromatic amino acid bet 99.9 5E-27 1.7E-31 213.5 14.3 242 71-343 41-294 (357)
131 2dkj_A Serine hydroxymethyltra 99.9 2.9E-26 9.8E-31 212.1 19.3 276 34-343 22-318 (407)
132 3dxv_A Alpha-amino-epsilon-cap 99.9 6.3E-26 2.2E-30 212.1 20.2 285 33-342 41-359 (439)
133 3pj0_A LMO0305 protein; struct 99.9 1.2E-26 4.2E-31 211.0 15.0 270 36-342 14-295 (359)
134 3nnk_A Ureidoglycine-glyoxylat 99.9 1.1E-25 3.8E-30 208.2 21.6 259 51-342 22-328 (411)
135 2pb2_A Acetylornithine/succiny 99.9 6.4E-26 2.2E-30 210.9 20.0 278 33-342 55-360 (420)
136 2c81_A Glutamine-2-deoxy-scyll 99.9 3.5E-25 1.2E-29 205.7 24.6 253 53-335 14-297 (418)
137 1ax4_A Tryptophanase; tryptoph 99.9 1.2E-25 4.2E-30 211.7 21.6 265 55-342 55-358 (467)
138 3ndn_A O-succinylhomoserine su 99.9 1.3E-25 4.4E-30 208.0 21.1 217 79-333 83-307 (414)
139 1zod_A DGD, 2,2-dialkylglycine 99.9 4.7E-26 1.6E-30 212.6 18.2 286 34-342 42-364 (433)
140 3isl_A Purine catabolism prote 99.9 2.3E-25 7.8E-30 206.5 22.1 258 51-342 20-328 (416)
141 3mad_A Sphingosine-1-phosphate 99.9 5.8E-25 2E-29 209.6 25.0 253 72-341 130-411 (514)
142 3nx3_A Acoat, acetylornithine 99.9 3.5E-25 1.2E-29 204.2 21.4 278 34-342 35-339 (395)
143 3mc6_A Sphingosine-1-phosphate 99.9 7.3E-25 2.5E-29 208.1 23.9 273 52-340 75-381 (497)
144 2bkw_A Alanine-glyoxylate amin 99.9 4.3E-25 1.5E-29 202.4 20.7 273 36-343 5-323 (385)
145 1mdo_A ARNB aminotransferase; 99.9 1.2E-24 4.1E-29 200.3 23.8 262 36-343 9-303 (393)
146 4ffc_A 4-aminobutyrate aminotr 99.9 1.9E-25 6.4E-30 209.6 18.5 288 34-342 63-384 (453)
147 3l44_A Glutamate-1-semialdehyd 99.9 1E-25 3.5E-30 210.3 16.6 266 33-324 53-342 (434)
148 3kgw_A Alanine-glyoxylate amin 99.9 3.2E-25 1.1E-29 203.8 19.5 258 51-342 32-326 (393)
149 3uwc_A Nucleotide-sugar aminot 99.9 1E-24 3.5E-29 199.4 22.5 252 34-330 5-274 (374)
150 3n5m_A Adenosylmethionine-8-am 99.9 1.8E-24 6.2E-29 203.0 24.4 283 34-341 48-380 (452)
151 3ffr_A Phosphoserine aminotran 99.9 1E-24 3.6E-29 198.2 22.1 271 37-342 5-306 (362)
152 3f0h_A Aminotransferase; RER07 99.9 1.5E-24 5E-29 198.5 22.8 254 51-334 28-305 (376)
153 3gju_A Putative aminotransfera 99.9 3E-24 1E-28 201.9 24.8 290 33-341 49-387 (460)
154 3a8u_X Omega-amino acid--pyruv 99.9 1E-24 3.6E-29 204.4 21.6 289 34-343 49-388 (449)
155 2oat_A Ornithine aminotransfer 99.9 3.8E-24 1.3E-28 200.0 24.9 274 34-342 75-381 (439)
156 4a6r_A Omega transaminase; tra 99.9 2.3E-24 8E-29 202.6 23.6 289 33-341 48-382 (459)
157 1gc0_A Methionine gamma-lyase; 99.9 3.8E-24 1.3E-28 197.5 24.3 214 77-328 65-286 (398)
158 2cy8_A D-phgat, D-phenylglycin 99.9 5.7E-25 2E-29 206.4 19.1 276 34-343 56-365 (453)
159 3qhx_A Cystathionine gamma-syn 99.9 4.5E-24 1.5E-28 196.6 24.4 216 77-329 66-287 (392)
160 3n0l_A Serine hydroxymethyltra 99.9 1.6E-24 5.3E-29 201.0 21.3 279 35-343 25-319 (417)
161 3cog_A Cystathionine gamma-lya 99.9 1.4E-24 4.6E-29 200.7 20.8 193 71-299 62-261 (403)
162 3dr4_A Putative perosamine syn 99.9 3.2E-24 1.1E-28 197.4 23.2 257 34-333 21-295 (391)
163 1z7d_A Ornithine aminotransfer 99.9 1.2E-24 4.1E-29 203.0 20.0 274 34-342 64-372 (433)
164 3nyt_A Aminotransferase WBPE; 99.9 1.3E-24 4.3E-29 198.5 19.4 239 53-329 14-269 (367)
165 1w23_A Phosphoserine aminotran 99.9 1.5E-25 5.3E-30 203.7 13.3 270 36-343 3-303 (360)
166 2fnu_A Aminotransferase; prote 99.9 8.8E-24 3E-28 193.1 24.9 244 52-333 10-275 (375)
167 2e7u_A Glutamate-1-semialdehyd 99.9 1.2E-24 4.1E-29 202.5 19.2 277 34-343 51-361 (424)
168 3ri6_A O-acetylhomoserine sulf 99.9 6.2E-24 2.1E-28 197.2 23.0 228 77-334 82-329 (430)
169 3acz_A Methionine gamma-lyase; 99.9 1.1E-23 3.8E-28 193.8 24.1 212 77-325 59-276 (389)
170 1cs1_A CGS, protein (cystathio 99.9 1.3E-23 4.3E-28 193.2 24.2 216 77-329 52-273 (386)
171 3oks_A 4-aminobutyrate transam 99.9 1.6E-24 5.4E-29 203.2 18.3 288 34-342 60-386 (451)
172 1qz9_A Kynureninase; kynurenin 99.9 2.8E-24 9.7E-29 199.3 19.6 268 35-343 27-349 (416)
173 3k28_A Glutamate-1-semialdehyd 99.9 1.3E-24 4.3E-29 202.7 16.8 265 33-324 51-339 (429)
174 1o69_A Aminotransferase; struc 99.9 1.4E-23 4.6E-28 193.5 23.4 240 53-332 10-271 (394)
175 2dgk_A GAD-beta, GADB, glutama 99.9 9.7E-24 3.3E-28 198.0 22.8 298 11-333 19-354 (452)
176 3dod_A Adenosylmethionine-8-am 99.9 6.1E-24 2.1E-28 199.2 21.0 287 33-342 42-377 (448)
177 2oqx_A Tryptophanase; lyase, p 99.9 3.1E-24 1.1E-28 202.1 18.9 264 55-342 53-359 (467)
178 3jzl_A Putative cystathionine 99.9 2.9E-23 1E-27 191.3 24.5 242 55-330 32-305 (409)
179 2epj_A Glutamate-1-semialdehyd 99.9 1.9E-24 6.5E-29 201.7 16.8 275 34-342 55-364 (434)
180 3frk_A QDTB; aminotransferase, 99.9 6.4E-24 2.2E-28 194.2 19.6 240 53-330 15-271 (373)
181 2cb1_A O-acetyl homoserine sul 99.9 8.2E-23 2.8E-27 189.4 26.9 245 51-329 32-304 (412)
182 1n8p_A Cystathionine gamma-lya 99.9 6.7E-24 2.3E-28 195.4 19.4 212 77-327 55-276 (393)
183 3tfu_A Adenosylmethionine-8-am 99.9 5.3E-24 1.8E-28 199.8 18.9 286 33-342 71-398 (457)
184 3i16_A Aluminum resistance pro 99.9 1.7E-23 6E-28 193.4 21.8 242 55-330 46-322 (427)
185 3hvy_A Cystathionine beta-lyas 99.9 3.7E-23 1.3E-27 191.2 23.7 241 55-330 47-322 (427)
186 3i5t_A Aminotransferase; pyrid 99.9 3.1E-23 1.1E-27 195.6 23.0 286 33-341 52-387 (476)
187 3ecd_A Serine hydroxymethyltra 99.9 5.6E-23 1.9E-27 190.9 24.5 277 35-343 32-327 (425)
188 1rv3_A Serine hydroxymethyltra 99.9 9.3E-24 3.2E-28 199.5 18.8 287 35-343 44-362 (483)
189 1pff_A Methionine gamma-lyase; 99.9 6.8E-23 2.3E-27 184.3 23.7 180 81-293 2-189 (331)
190 2fq6_A Cystathionine beta-lyas 99.9 7.2E-23 2.5E-27 189.4 23.2 214 78-329 83-304 (415)
191 2c0r_A PSAT, phosphoserine ami 99.9 4.9E-24 1.7E-28 194.1 14.6 254 36-330 4-288 (362)
192 1qgn_A Protein (cystathionine 99.9 1.1E-22 3.7E-27 189.4 23.5 217 79-333 116-340 (445)
193 4e77_A Glutamate-1-semialdehyd 99.9 2E-23 6.9E-28 194.5 18.4 284 33-343 51-362 (429)
194 3hmu_A Aminotransferase, class 99.9 9.9E-23 3.4E-27 191.9 23.0 286 33-338 53-382 (472)
195 3nmy_A Xometc, cystathionine g 99.9 1.2E-22 4E-27 187.3 22.9 219 78-333 68-294 (400)
196 3fq8_A Glutamate-1-semialdehyd 99.9 2.3E-23 7.7E-28 194.1 18.2 282 34-342 51-360 (427)
197 1wyu_B Glycine dehydrogenase s 99.9 5.8E-23 2E-27 193.8 20.8 263 36-330 67-367 (474)
198 3e9k_A Kynureninase; kynurenin 99.9 7.2E-23 2.5E-27 192.8 20.7 277 36-342 67-406 (465)
199 3gbx_A Serine hydroxymethyltra 99.9 7.6E-23 2.6E-27 189.7 19.0 269 53-343 42-326 (420)
200 3h7f_A Serine hydroxymethyltra 99.9 1E-22 3.6E-27 190.7 19.9 276 36-343 46-344 (447)
201 3ju7_A Putative PLP-dependent 99.9 2.7E-22 9.1E-27 183.7 22.0 243 50-328 11-274 (377)
202 3ht4_A Aluminum resistance pro 99.9 5E-22 1.7E-26 184.5 23.9 225 83-330 67-311 (431)
203 3vp6_A Glutamate decarboxylase 99.9 2.1E-21 7.2E-26 184.5 28.7 266 56-340 111-426 (511)
204 2okj_A Glutamate decarboxylase 99.9 2.9E-21 1E-25 183.5 29.0 264 59-340 111-423 (504)
205 3hbx_A GAD 1, glutamate decarb 99.9 4.6E-22 1.6E-26 188.7 23.3 304 14-341 36-378 (502)
206 2vi8_A Serine hydroxymethyltra 99.9 3.6E-22 1.2E-26 184.4 20.4 272 34-343 23-317 (405)
207 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 2E-21 6.7E-26 181.5 23.9 183 53-261 41-234 (437)
208 2cjg_A L-lysine-epsilon aminot 99.9 2.1E-22 7.3E-27 188.6 17.0 280 34-343 53-393 (449)
209 2ctz_A O-acetyl-L-homoserine s 99.9 3.3E-21 1.1E-25 179.0 23.3 157 79-261 60-222 (421)
210 2qma_A Diaminobutyrate-pyruvat 99.9 2.5E-21 8.5E-26 183.7 22.9 268 52-338 111-427 (497)
211 1js3_A DDC;, DOPA decarboxylas 99.9 2.1E-21 7E-26 183.8 22.1 269 54-340 87-411 (486)
212 2fyf_A PSAT, phosphoserine ami 99.9 1.5E-21 5.1E-26 180.1 18.2 267 34-342 38-338 (398)
213 3b8x_A WBDK, pyridoxamine 5-ph 99.9 7.8E-20 2.7E-24 168.1 27.1 244 52-332 12-296 (390)
214 2jis_A Cysteine sulfinic acid 99.9 1.3E-19 4.5E-24 172.5 27.8 252 71-340 138-436 (515)
215 2z67_A O-phosphoseryl-tRNA(SEC 99.9 3.4E-21 1.2E-25 180.8 14.3 243 79-341 131-386 (456)
216 2a7v_A Serine hydroxymethyltra 99.9 4E-20 1.4E-24 173.6 21.4 284 36-343 55-372 (490)
217 4e1o_A HDC, histidine decarbox 99.9 1.2E-19 4.1E-24 171.3 24.5 310 10-342 51-416 (481)
218 2yky_A Beta-transaminase; tran 99.8 3.8E-23 1.3E-27 193.1 0.0 277 33-343 98-396 (465)
219 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.4E-20 4.8E-25 176.0 17.3 169 74-262 54-227 (446)
220 3k40_A Aromatic-L-amino-acid d 99.8 5.4E-19 1.8E-23 166.5 21.9 314 9-341 45-408 (475)
221 1c4k_A Protein (ornithine deca 99.8 3.5E-19 1.2E-23 174.4 17.6 241 77-333 173-447 (730)
222 1ohv_A 4-aminobutyrate aminotr 99.8 9.7E-19 3.3E-23 164.7 18.8 286 33-342 61-415 (472)
223 3ke3_A Putative serine-pyruvat 99.8 5.6E-18 1.9E-22 155.1 22.6 230 81-333 35-301 (379)
224 2vyc_A Biodegradative arginine 99.8 2.5E-18 8.6E-23 169.7 20.6 232 79-327 207-466 (755)
225 3n75_A LDC, lysine decarboxyla 99.8 1.1E-17 3.6E-22 162.8 18.7 229 75-326 193-443 (715)
226 1wyu_A Glycine dehydrogenase ( 99.8 7.6E-18 2.6E-22 157.2 16.9 217 80-334 111-372 (438)
227 3e77_A Phosphoserine aminotran 99.6 4.8E-14 1.6E-18 128.0 17.7 254 49-330 20-297 (377)
228 3m5u_A Phosphoserine aminotran 99.6 8.5E-14 2.9E-18 125.8 17.0 250 34-328 3-283 (361)
229 3qm2_A Phosphoserine aminotran 99.5 6.8E-14 2.3E-18 127.6 13.1 250 51-328 36-309 (386)
230 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 1.3E-13 4.5E-18 125.4 12.9 223 84-324 120-354 (501)
231 4ao9_A Beta-phenylalanine amin 99.5 1E-12 3.4E-17 121.9 19.1 257 33-323 85-359 (454)
232 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 2E-13 6.9E-18 125.5 13.0 186 80-279 97-292 (450)
233 3ou5_A Serine hydroxymethyltra 99.4 3.7E-11 1.2E-15 109.0 22.5 287 35-343 54-372 (490)
234 4atq_A 4-aminobutyrate transam 99.4 1.8E-11 6.2E-16 113.9 20.7 243 34-298 63-339 (456)
235 4e3q_A Pyruvate transaminase; 99.4 2E-11 6.9E-16 114.0 20.8 270 33-324 65-382 (473)
236 4a0g_A Adenosylmethionine-8-am 99.3 2.3E-11 7.7E-16 121.1 13.7 243 36-298 381-715 (831)
237 3gh5_A HEX1, beta-hexosaminida 84.8 6 0.0002 36.9 10.2 114 94-211 124-274 (525)
238 4fgs_A Probable dehydrogenase 84.4 7.1 0.00024 33.0 9.9 97 101-202 30-134 (273)
239 3rwb_A TPLDH, pyridoxal 4-dehy 78.1 17 0.00059 29.8 10.0 95 101-200 7-109 (247)
240 1jak_A Beta-N-acetylhexosamini 76.3 12 0.00041 34.9 9.2 111 97-211 103-249 (512)
241 2gjx_A Beta-hexosaminidase alp 74.5 12 0.0004 34.8 8.6 107 97-211 97-233 (507)
242 3tpc_A Short chain alcohol deh 73.9 24 0.00082 29.0 9.9 94 101-200 8-114 (257)
243 1ofu_X SULA, hypothetical prot 73.9 20 0.00068 26.0 8.0 103 102-209 6-113 (119)
244 4dqx_A Probable oxidoreductase 73.5 26 0.00088 29.3 10.0 95 101-200 28-130 (277)
245 4hp8_A 2-deoxy-D-gluconate 3-d 72.7 18 0.00061 30.0 8.5 97 101-202 9-110 (247)
246 4g81_D Putative hexonate dehyd 72.2 31 0.0011 28.7 10.0 98 99-201 8-116 (255)
247 4e6p_A Probable sorbitol dehyd 71.5 30 0.001 28.5 9.9 95 101-200 9-111 (259)
248 3tzq_B Short-chain type dehydr 71.3 42 0.0015 27.8 10.9 94 101-200 12-116 (271)
249 3m1a_A Putative dehydrogenase; 71.2 28 0.00096 29.0 9.8 65 102-171 7-71 (281)
250 3rd5_A Mypaa.01249.C; ssgcid, 70.2 13 0.00045 31.4 7.5 78 100-182 16-94 (291)
251 3gvc_A Oxidoreductase, probabl 70.0 23 0.0008 29.6 9.0 94 102-200 30-132 (277)
252 4fn4_A Short chain dehydrogena 69.9 30 0.001 28.7 9.4 96 101-201 7-115 (254)
253 3grp_A 3-oxoacyl-(acyl carrier 69.8 25 0.00084 29.3 9.0 66 101-171 28-93 (266)
254 4eso_A Putative oxidoreductase 69.3 35 0.0012 28.0 9.8 97 100-201 8-112 (255)
255 3rcn_A Beta-N-acetylhexosamini 69.1 10 0.00035 35.6 6.8 116 95-211 81-242 (543)
256 4gkb_A 3-oxoacyl-[acyl-carrier 69.0 49 0.0017 27.5 10.9 96 101-201 7-112 (258)
257 1now_A Beta-hexosaminidase bet 68.9 26 0.00088 32.5 9.5 106 97-211 103-238 (507)
258 3ppi_A 3-hydroxyacyl-COA dehyd 68.5 23 0.0008 29.5 8.7 65 101-170 31-95 (281)
259 3l6e_A Oxidoreductase, short-c 67.8 32 0.0011 27.9 9.1 94 102-200 5-106 (235)
260 3ged_A Short-chain dehydrogena 67.5 35 0.0012 28.2 9.3 94 102-201 4-105 (247)
261 3n74_A 3-ketoacyl-(acyl-carrie 66.3 45 0.0015 27.3 9.9 94 101-199 10-112 (261)
262 3gem_A Short chain dehydrogena 65.6 36 0.0012 28.1 9.2 65 99-170 26-90 (260)
263 3op4_A 3-oxoacyl-[acyl-carrier 65.1 40 0.0014 27.5 9.3 94 101-200 10-112 (248)
264 1oft_A SULA, hypothetical prot 64.8 45 0.0015 25.5 10.6 79 123-209 74-155 (161)
265 3rjz_A N-type ATP pyrophosphat 64.0 59 0.002 26.7 10.2 99 102-210 7-120 (237)
266 3h7a_A Short chain dehydrogena 63.7 59 0.002 26.5 11.2 95 101-200 8-112 (252)
267 3guy_A Short-chain dehydrogena 63.6 20 0.0007 28.8 7.1 93 102-200 3-101 (230)
268 4b79_A PA4098, probable short- 63.4 51 0.0018 27.1 9.5 93 101-201 12-106 (242)
269 2o23_A HADH2 protein; HSD17B10 63.1 61 0.0021 26.4 11.3 66 101-171 13-78 (265)
270 2yvq_A Carbamoyl-phosphate syn 62.9 45 0.0015 24.8 10.7 109 97-212 21-131 (143)
271 3pxx_A Carveol dehydrogenase; 62.5 32 0.0011 28.7 8.4 96 101-201 11-127 (287)
272 1hdc_A 3-alpha, 20 beta-hydrox 62.3 57 0.002 26.6 9.8 66 101-171 6-71 (254)
273 1hxh_A 3BETA/17BETA-hydroxyste 62.1 63 0.0022 26.3 10.0 93 102-199 8-108 (253)
274 4ibo_A Gluconate dehydrogenase 61.2 61 0.0021 26.8 9.9 96 99-200 25-132 (271)
275 1uls_A Putative 3-oxoacyl-acyl 61.0 62 0.0021 26.2 9.7 91 102-200 7-106 (245)
276 3gaf_A 7-alpha-hydroxysteroid 60.7 56 0.0019 26.7 9.5 94 101-200 13-117 (256)
277 4dyv_A Short-chain dehydrogena 59.5 55 0.0019 27.2 9.3 94 101-200 28-132 (272)
278 1vl8_A Gluconate 5-dehydrogena 59.3 74 0.0025 26.2 10.4 95 101-200 22-128 (267)
279 1c7s_A Beta-N-acetylhexosamini 59.2 32 0.0011 34.1 8.5 115 97-211 265-418 (858)
280 2ew8_A (S)-1-phenylethanol deh 58.8 72 0.0025 25.9 11.0 94 101-199 8-110 (249)
281 3ozo_A N-acetylglucosaminidase 58.1 54 0.0019 30.9 9.6 101 102-211 142-274 (572)
282 3tjr_A Short chain dehydrogena 57.8 81 0.0028 26.5 10.2 94 101-200 32-137 (301)
283 3lyl_A 3-oxoacyl-(acyl-carrier 57.7 73 0.0025 25.7 9.9 95 101-200 6-111 (247)
284 3f9i_A 3-oxoacyl-[acyl-carrier 57.7 44 0.0015 27.1 8.2 75 100-179 14-90 (249)
285 3ak4_A NADH-dependent quinucli 57.5 78 0.0027 25.9 10.1 95 101-200 13-115 (263)
286 4fc7_A Peroxisomal 2,4-dienoyl 57.3 82 0.0028 26.1 10.6 94 101-200 28-134 (277)
287 1x1t_A D(-)-3-hydroxybutyrate 56.8 79 0.0027 25.8 10.5 93 102-199 6-111 (260)
288 3rih_A Short chain dehydrogena 56.4 89 0.0031 26.2 11.1 95 101-201 42-149 (293)
289 1nff_A Putative oxidoreductase 56.1 82 0.0028 25.8 10.0 66 101-171 8-73 (260)
290 3tfo_A Putative 3-oxoacyl-(acy 56.1 85 0.0029 25.9 10.1 93 102-200 5-110 (264)
291 3t7c_A Carveol dehydrogenase; 54.9 94 0.0032 26.1 10.6 96 99-200 27-147 (299)
292 2rhc_B Actinorhodin polyketide 53.4 95 0.0032 25.7 9.9 95 101-200 23-128 (277)
293 2nu8_A Succinyl-COA ligase [AD 53.3 23 0.00078 30.1 5.8 76 133-218 52-127 (288)
294 1bqc_A Protein (beta-mannanase 53.2 37 0.0013 28.7 7.3 22 192-213 64-85 (302)
295 3rkr_A Short chain oxidoreduct 53.0 93 0.0032 25.4 10.1 95 101-200 30-136 (262)
296 3nyw_A Putative oxidoreductase 53.0 72 0.0025 25.9 8.8 94 102-200 9-115 (250)
297 2a4k_A 3-oxoacyl-[acyl carrier 52.9 80 0.0027 25.9 9.2 66 101-171 7-72 (263)
298 3tsc_A Putative oxidoreductase 52.8 68 0.0023 26.5 8.8 94 101-200 12-130 (277)
299 3sju_A Keto reductase; short-c 52.7 91 0.0031 25.8 9.6 93 102-200 26-130 (279)
300 2cfc_A 2-(R)-hydroxypropyl-COM 52.4 81 0.0028 25.3 9.1 64 103-171 5-72 (250)
301 1geg_A Acetoin reductase; SDR 52.2 94 0.0032 25.2 9.6 92 103-199 5-107 (256)
302 3l77_A Short-chain alcohol deh 52.1 88 0.003 24.9 10.2 94 102-200 4-109 (235)
303 2jah_A Clavulanic acid dehydro 52.1 93 0.0032 25.2 10.2 94 101-199 8-112 (247)
304 2wsb_A Galactitol dehydrogenas 52.0 92 0.0031 25.1 9.8 65 101-170 12-77 (254)
305 3uve_A Carveol dehydrogenase ( 52.0 1E+02 0.0035 25.6 10.4 32 100-131 11-42 (286)
306 3r1i_A Short-chain type dehydr 51.8 1E+02 0.0035 25.5 10.9 97 99-200 31-138 (276)
307 3ucx_A Short chain dehydrogena 51.7 98 0.0034 25.3 9.6 95 100-200 11-118 (264)
308 3qlj_A Short chain dehydrogena 51.5 81 0.0028 26.8 9.2 93 102-200 28-143 (322)
309 3ai3_A NADPH-sorbose reductase 51.3 98 0.0034 25.2 10.5 66 101-171 8-77 (263)
310 3sx2_A Putative 3-ketoacyl-(ac 51.3 1E+02 0.0035 25.4 10.1 31 101-131 14-44 (278)
311 4dmm_A 3-oxoacyl-[acyl-carrier 50.8 71 0.0024 26.4 8.5 94 101-200 29-135 (269)
312 3bk2_A RNAse J, metal dependen 50.4 69 0.0024 30.0 9.1 78 122-207 337-423 (562)
313 4egf_A L-xylulose reductase; s 49.7 1.1E+02 0.0036 25.2 9.5 55 101-155 21-79 (266)
314 3zu3_A Putative reductase YPO4 49.5 1.4E+02 0.0049 26.6 11.5 90 87-182 34-145 (405)
315 3a28_C L-2.3-butanediol dehydr 49.2 1.1E+02 0.0036 25.0 9.3 64 103-171 5-73 (258)
316 3cxt_A Dehydrogenase with diff 48.0 1.2E+02 0.0042 25.3 9.8 93 101-199 35-139 (291)
317 3is3_A 17BETA-hydroxysteroid d 47.8 69 0.0024 26.4 8.0 93 102-200 20-125 (270)
318 3pgx_A Carveol dehydrogenase; 47.3 89 0.003 25.8 8.6 31 101-131 16-46 (280)
319 3zv4_A CIS-2,3-dihydrobiphenyl 47.3 90 0.0031 25.9 8.7 65 101-170 6-70 (281)
320 3lf2_A Short chain oxidoreduct 47.2 1.1E+02 0.0039 24.9 9.2 97 99-201 7-117 (265)
321 3mwd_B ATP-citrate synthase; A 47.2 42 0.0014 29.2 6.5 79 131-219 64-144 (334)
322 2yv2_A Succinyl-COA synthetase 47.0 32 0.0011 29.3 5.7 51 163-219 85-135 (297)
323 1fmc_A 7 alpha-hydroxysteroid 46.7 1.1E+02 0.0038 24.5 10.5 66 101-171 12-80 (255)
324 3o38_A Short chain dehydrogena 46.7 1.1E+02 0.0038 24.9 9.1 96 100-200 22-130 (266)
325 3qiv_A Short-chain dehydrogena 46.6 1.1E+02 0.0039 24.6 10.0 66 101-171 10-78 (253)
326 3v2h_A D-beta-hydroxybutyrate 46.6 1.2E+02 0.0043 25.0 10.4 95 100-200 25-133 (281)
327 3s55_A Putative short-chain de 46.3 1.2E+02 0.0042 24.9 10.6 94 101-200 11-128 (281)
328 1yb1_A 17-beta-hydroxysteroid 46.1 1.2E+02 0.0042 24.8 9.4 66 100-170 31-99 (272)
329 1zk4_A R-specific alcohol dehy 45.9 1.1E+02 0.0039 24.4 9.7 31 102-132 8-38 (251)
330 4gqr_A Pancreatic alpha-amylas 45.7 14 0.00049 33.6 3.6 33 184-219 71-103 (496)
331 2uvd_A 3-oxoacyl-(acyl-carrier 45.5 1.2E+02 0.004 24.4 9.8 93 102-199 6-110 (246)
332 3tsm_A IGPS, indole-3-glycerol 45.1 1.3E+02 0.0043 25.3 9.0 50 158-213 127-176 (272)
333 3sc4_A Short chain dehydrogena 45.0 1.3E+02 0.0045 24.9 11.9 95 101-200 10-122 (285)
334 3ftp_A 3-oxoacyl-[acyl-carrier 44.7 1.3E+02 0.0045 24.7 9.6 93 102-200 30-134 (270)
335 3imf_A Short chain dehydrogena 44.6 1.3E+02 0.0043 24.5 9.9 94 102-201 7-113 (257)
336 1hjs_A Beta-1,4-galactanase; 4 44.5 79 0.0027 27.3 8.0 38 182-219 49-86 (332)
337 2pnf_A 3-oxoacyl-[acyl-carrier 44.5 1.2E+02 0.0041 24.2 10.2 94 101-199 8-113 (248)
338 3pk0_A Short-chain dehydrogena 44.2 1.3E+02 0.0044 24.5 9.1 95 101-200 11-117 (262)
339 2yv1_A Succinyl-COA ligase [AD 43.9 22 0.00076 30.3 4.2 51 163-219 84-134 (294)
340 3oec_A Carveol dehydrogenase ( 43.7 1.5E+02 0.0051 25.1 10.4 94 101-200 47-164 (317)
341 3tl3_A Short-chain type dehydr 43.6 81 0.0028 25.7 7.7 92 102-201 11-113 (257)
342 1spx_A Short-chain reductase f 43.4 1.1E+02 0.0037 25.2 8.6 31 102-132 7-38 (278)
343 1iy8_A Levodione reductase; ox 43.4 1.3E+02 0.0046 24.5 10.2 66 101-171 14-84 (267)
344 2ae2_A Protein (tropinone redu 43.1 1.3E+02 0.0045 24.4 11.0 95 100-200 9-116 (260)
345 3v8b_A Putative dehydrogenase, 42.9 1.4E+02 0.0049 24.7 9.9 66 101-171 29-97 (283)
346 3asu_A Short-chain dehydrogena 42.9 1.2E+02 0.004 24.6 8.6 63 104-171 3-66 (248)
347 3dqp_A Oxidoreductase YLBE; al 42.6 1.2E+02 0.0041 23.7 8.6 95 102-207 2-98 (219)
348 4imr_A 3-oxoacyl-(acyl-carrier 42.5 1.4E+02 0.0049 24.6 10.2 99 99-200 32-138 (275)
349 2c07_A 3-oxoacyl-(acyl-carrier 42.4 1.4E+02 0.0049 24.6 11.0 64 102-170 46-112 (285)
350 1oi7_A Succinyl-COA synthetase 42.2 31 0.0011 29.3 4.9 51 163-219 78-128 (288)
351 1xhl_A Short-chain dehydrogena 42.1 1.5E+02 0.0052 24.7 9.5 33 101-133 27-59 (297)
352 1oaa_A Sepiapterin reductase; 42.1 1.2E+02 0.0042 24.5 8.6 95 102-201 8-125 (259)
353 1pjq_A CYSG, siroheme synthase 41.7 1.8E+02 0.0061 26.3 10.2 95 98-214 10-106 (457)
354 2q5c_A NTRC family transcripti 41.7 93 0.0032 24.5 7.4 8 103-110 54-61 (196)
355 2fp4_A Succinyl-COA ligase [GD 41.4 27 0.00092 30.0 4.3 51 163-219 85-136 (305)
356 1b93_A Protein (methylglyoxal 41.3 75 0.0026 24.0 6.3 66 144-214 56-121 (152)
357 3ezl_A Acetoacetyl-COA reducta 41.3 1.2E+02 0.0042 24.4 8.5 96 100-200 12-120 (256)
358 3awd_A GOX2181, putative polyo 41.0 1.4E+02 0.0048 24.0 10.3 66 101-171 14-82 (260)
359 2z1n_A Dehydrogenase; reductas 40.9 1.4E+02 0.0049 24.1 10.4 32 101-132 8-39 (260)
360 1xkq_A Short-chain reductase f 40.7 1.5E+02 0.0052 24.3 9.6 31 102-132 8-38 (280)
361 1w6u_A 2,4-dienoyl-COA reducta 40.0 1.6E+02 0.0055 24.4 10.1 65 101-170 27-95 (302)
362 3edm_A Short chain dehydrogena 40.0 1.5E+02 0.0051 24.1 11.3 96 101-201 9-117 (259)
363 2e8y_A AMYX protein, pullulana 39.9 16 0.00053 35.7 2.9 28 192-219 315-342 (718)
364 2ya0_A Putative alkaline amylo 39.8 20 0.00067 34.9 3.6 28 192-219 254-281 (714)
365 3v2g_A 3-oxoacyl-[acyl-carrier 39.5 1.6E+02 0.0054 24.2 10.8 97 98-200 29-138 (271)
366 3kvo_A Hydroxysteroid dehydrog 39.4 1.9E+02 0.0063 25.0 12.3 94 101-200 46-158 (346)
367 3ijr_A Oxidoreductase, short c 39.1 1.7E+02 0.0057 24.4 10.7 96 100-201 47-156 (291)
368 3rku_A Oxidoreductase YMR226C; 38.8 1.6E+02 0.0054 24.5 8.9 94 102-200 35-145 (287)
369 2yl5_A Beta-N-acetylhexosamini 38.8 25 0.00087 31.9 4.0 28 184-211 86-113 (442)
370 1wzu_A Quinolinate synthetase 38.4 66 0.0022 27.5 6.2 80 123-209 137-227 (300)
371 1yht_A DSPB; beta barrel, hydr 38.1 56 0.0019 28.8 6.0 71 138-211 39-113 (367)
372 1g94_A Alpha-amylase; beta-alp 38.0 21 0.00071 32.4 3.3 29 192-220 64-92 (448)
373 3gdg_A Probable NADP-dependent 37.6 1.6E+02 0.0053 24.0 8.6 97 99-200 19-130 (267)
374 3e2i_A Thymidine kinase; Zn-bi 37.4 75 0.0026 25.7 6.1 93 110-216 43-138 (219)
375 1yxm_A Pecra, peroxisomal tran 37.4 1.8E+02 0.0061 24.2 10.5 95 101-200 19-129 (303)
376 1ae1_A Tropinone reductase-I; 37.2 1.7E+02 0.0059 23.9 10.9 93 101-199 22-127 (273)
377 2bd0_A Sepiapterin reductase; 36.9 1.6E+02 0.0054 23.4 9.0 64 103-171 5-78 (244)
378 2q2v_A Beta-D-hydroxybutyrate 36.4 1.7E+02 0.0058 23.6 11.1 93 102-199 6-107 (255)
379 3t4x_A Oxidoreductase, short c 36.2 1.8E+02 0.006 23.8 10.4 95 101-200 11-114 (267)
380 1lwj_A 4-alpha-glucanotransfer 36.1 33 0.0011 31.0 4.3 28 192-219 69-96 (441)
381 2zcu_A Uncharacterized oxidore 36.1 1.8E+02 0.006 23.7 9.3 42 162-207 55-96 (286)
382 3ew7_A LMO0794 protein; Q8Y8U8 35.9 1.5E+02 0.005 23.0 7.9 92 103-206 3-94 (221)
383 4iin_A 3-ketoacyl-acyl carrier 35.6 1.8E+02 0.0062 23.7 10.9 98 98-200 27-136 (271)
384 1fob_A Beta-1,4-galactanase; B 35.0 1.5E+02 0.0051 25.5 8.2 37 183-219 50-86 (334)
385 2yl6_A Beta-N-acetylhexosamini 34.9 26 0.00087 31.8 3.3 28 184-211 83-110 (434)
386 2b4q_A Rhamnolipids biosynthes 34.9 1.9E+02 0.0065 23.8 9.6 33 101-133 30-62 (276)
387 1gcy_A Glucan 1,4-alpha-maltot 34.7 37 0.0013 31.6 4.5 29 192-220 92-120 (527)
388 2al1_A Enolase 1, 2-phospho-D- 34.6 49 0.0017 29.9 5.2 95 110-211 276-371 (436)
389 1xp8_A RECA protein, recombina 34.6 1.4E+02 0.0047 26.2 8.0 19 193-211 188-206 (366)
390 2x9g_A PTR1, pteridine reducta 34.5 1.9E+02 0.0067 23.8 9.1 53 102-154 25-82 (288)
391 3tox_A Short chain dehydrogena 34.5 2E+02 0.0067 23.8 10.1 93 102-200 10-115 (280)
392 1ht6_A AMY1, alpha-amylase iso 34.5 35 0.0012 30.4 4.2 28 192-219 68-95 (405)
393 2hq1_A Glucose/ribitol dehydro 34.3 1.7E+02 0.006 23.2 8.9 66 101-171 6-75 (247)
394 3dii_A Short-chain dehydrogena 34.3 1.8E+02 0.0062 23.3 9.1 93 102-200 4-104 (247)
395 1ud2_A Amylase, alpha-amylase; 34.3 28 0.00097 31.8 3.6 28 192-219 80-107 (480)
396 3ctm_A Carbonyl reductase; alc 34.2 1.5E+02 0.0053 24.2 8.1 66 101-171 35-103 (279)
397 1jr2_A Uroporphyrinogen-III sy 33.9 57 0.002 27.3 5.3 78 104-182 137-219 (286)
398 2bgk_A Rhizome secoisolaricire 33.8 1.9E+02 0.0065 23.5 10.1 32 101-132 17-48 (278)
399 2ya1_A Putative alkaline amylo 33.7 28 0.00094 35.5 3.6 28 192-219 561-588 (1014)
400 3oid_A Enoyl-[acyl-carrier-pro 33.7 1.9E+02 0.0065 23.4 10.2 93 102-200 5-111 (258)
401 3u9l_A 3-oxoacyl-[acyl-carrier 33.6 2.2E+02 0.0076 24.1 10.1 93 102-200 7-116 (324)
402 3bh4_A Alpha-amylase; calcium, 33.5 30 0.001 31.7 3.6 28 192-219 78-105 (483)
403 2dtx_A Glucose 1-dehydrogenase 33.4 2E+02 0.0067 23.5 9.8 30 101-130 9-38 (264)
404 1wza_A Alpha-amylase A; hydrol 33.2 35 0.0012 31.3 4.0 28 192-219 81-108 (488)
405 3dhn_A NAD-dependent epimerase 32.9 1.7E+02 0.006 22.8 8.1 96 102-207 6-104 (227)
406 1xq1_A Putative tropinone redu 32.9 1.9E+02 0.0067 23.3 10.3 93 101-198 15-119 (266)
407 1wpc_A Glucan 1,4-alpha-maltoh 32.8 31 0.0011 31.6 3.6 28 192-219 82-109 (485)
408 1mxg_A Alpha amylase; hyperthe 32.8 39 0.0013 30.5 4.2 28 192-219 86-113 (435)
409 2z1k_A (NEO)pullulanase; hydro 32.7 34 0.0011 31.2 3.8 28 192-219 96-123 (475)
410 4aie_A Glucan 1,6-alpha-glucos 32.6 33 0.0011 31.8 3.8 27 192-218 79-105 (549)
411 2aaa_A Alpha-amylase; glycosid 32.4 40 0.0014 30.8 4.3 29 192-220 97-125 (484)
412 2nwq_A Probable short-chain de 32.4 1.8E+02 0.0063 23.8 8.2 65 102-171 23-89 (272)
413 2guy_A Alpha-amylase A; (beta- 32.3 34 0.0012 31.2 3.8 28 192-219 97-124 (478)
414 1hvx_A Alpha-amylase; hydrolas 32.2 32 0.0011 31.9 3.6 28 192-219 81-108 (515)
415 1zem_A Xylitol dehydrogenase; 32.2 2E+02 0.0069 23.3 10.2 94 101-200 8-114 (262)
416 1x7f_A Outer surface protein; 32.1 64 0.0022 28.6 5.3 79 165-259 46-127 (385)
417 3io5_A Recombination and repai 31.5 1.1E+02 0.0036 26.6 6.4 90 123-216 57-173 (333)
418 3afn_B Carbonyl reductase; alp 31.4 2E+02 0.0068 23.0 10.7 94 101-199 8-114 (258)
419 1ua7_A Alpha-amylase; beta-alp 31.4 38 0.0013 30.4 3.9 28 192-219 74-101 (422)
420 2dh2_A 4F2 cell-surface antige 31.2 40 0.0014 30.3 4.0 28 192-219 81-108 (424)
421 3svt_A Short-chain type dehydr 31.1 2.2E+02 0.0075 23.3 9.7 94 101-200 12-121 (281)
422 3qp9_A Type I polyketide synth 31.0 3.1E+02 0.011 25.3 10.1 98 98-200 248-371 (525)
423 2hmc_A AGR_L_411P, dihydrodipi 31.0 2.6E+02 0.0087 24.2 9.0 88 102-214 94-188 (344)
424 3r3s_A Oxidoreductase; structu 30.9 2.3E+02 0.0079 23.5 10.3 95 101-201 50-159 (294)
425 1i4n_A Indole-3-glycerol phosp 30.8 99 0.0034 25.6 6.0 50 159-214 109-158 (251)
426 2ehd_A Oxidoreductase, oxidore 30.6 2E+02 0.0068 22.7 9.1 31 102-132 7-37 (234)
427 3ksu_A 3-oxoacyl-acyl carrier 30.6 2.2E+02 0.0074 23.1 12.0 97 99-200 10-120 (262)
428 3tha_A Tryptophan synthase alp 30.6 2.1E+02 0.007 23.7 7.9 155 33-211 40-204 (252)
429 1eye_A DHPS 1, dihydropteroate 30.4 2.1E+02 0.0072 24.0 8.1 25 192-216 154-181 (280)
430 4gmf_A Yersiniabactin biosynth 30.4 90 0.0031 27.5 6.1 27 191-217 104-130 (372)
431 2h7i_A Enoyl-[acyl-carrier-pro 30.3 2.2E+02 0.0075 23.1 9.0 65 102-171 9-76 (269)
432 2j9r_A Thymidine kinase; TK1, 30.2 1.1E+02 0.0038 24.5 6.1 91 110-214 43-136 (214)
433 1jae_A Alpha-amylase; glycosid 30.1 33 0.0011 31.3 3.3 29 192-220 74-102 (471)
434 2zr9_A Protein RECA, recombina 30.0 82 0.0028 27.4 5.7 124 77-211 44-193 (349)
435 3qja_A IGPS, indole-3-glycerol 30.0 1.1E+02 0.0039 25.5 6.3 50 158-213 120-169 (272)
436 1edo_A Beta-keto acyl carrier 29.9 2.1E+02 0.0071 22.7 9.9 64 103-171 4-71 (244)
437 3faw_A Reticulocyte binding pr 29.7 36 0.0012 34.0 3.6 27 192-218 369-395 (877)
438 2wkj_A N-acetylneuraminate lya 29.7 2.6E+02 0.0087 23.7 8.8 89 80-200 67-164 (303)
439 1vhx_A Putative holliday junct 29.6 1.4E+02 0.0047 22.4 6.2 59 159-217 40-102 (150)
440 3zq4_A Ribonuclease J 1, RNAse 29.4 1.6E+02 0.0054 27.6 7.8 97 103-207 294-408 (555)
441 3i1j_A Oxidoreductase, short c 29.3 2.1E+02 0.0073 22.7 9.2 33 102-134 16-48 (247)
442 2r8w_A AGR_C_1641P; APC7498, d 29.3 2E+02 0.0068 24.8 8.0 89 80-200 90-186 (332)
443 1j0h_A Neopullulanase; beta-al 29.3 48 0.0016 31.3 4.4 29 191-219 221-249 (588)
444 1wzl_A Alpha-amylase II; pullu 29.3 46 0.0016 31.4 4.2 29 191-219 218-246 (585)
445 3dz1_A Dihydrodipicolinate syn 29.1 1.4E+02 0.0049 25.4 7.0 76 106-200 85-160 (313)
446 3e03_A Short chain dehydrogena 29.1 2.4E+02 0.0081 23.1 11.9 95 100-200 6-119 (274)
447 3qtp_A Enolase 1; glycolysis, 29.0 56 0.0019 29.6 4.4 95 109-212 281-379 (441)
448 3dhu_A Alpha-amylase; structur 28.9 40 0.0014 30.5 3.6 29 191-219 82-110 (449)
449 3o63_A Probable thiamine-phosp 28.7 68 0.0023 26.4 4.6 52 163-215 46-105 (243)
450 1ja9_A 4HNR, 1,3,6,8-tetrahydr 28.5 2.3E+02 0.008 22.8 9.2 65 102-171 23-91 (274)
451 3mfq_A TROA, high-affinity zin 28.5 1.5E+02 0.0051 24.8 6.9 75 125-210 164-242 (282)
452 2wc7_A Alpha amylase, catalyti 28.4 34 0.0012 31.3 3.1 27 193-219 103-129 (488)
453 2qq5_A DHRS1, dehydrogenase/re 28.3 2.3E+02 0.008 22.8 8.2 64 102-170 6-73 (260)
454 1mxh_A Pteridine reductase 2; 28.2 2.4E+02 0.0083 22.9 8.3 31 102-132 13-43 (276)
455 3un1_A Probable oxidoreductase 28.1 2.4E+02 0.0082 22.9 8.6 32 101-132 29-60 (260)
456 3a5f_A Dihydrodipicolinate syn 28.1 2.7E+02 0.0091 23.3 9.0 34 102-136 72-109 (291)
457 3pff_A ATP-citrate synthase; p 28.1 1.1E+02 0.0036 30.4 6.5 79 131-219 550-630 (829)
458 3osu_A 3-oxoacyl-[acyl-carrier 28.1 2.3E+02 0.0079 22.6 10.6 94 102-200 6-111 (246)
459 2ojp_A DHDPS, dihydrodipicolin 27.9 2.7E+02 0.0092 23.3 9.1 77 102-200 72-153 (292)
460 3l21_A DHDPS, dihydrodipicolin 27.8 2E+02 0.0069 24.4 7.7 46 158-204 30-79 (304)
461 1ea9_C Cyclomaltodextrinase; h 27.7 53 0.0018 31.0 4.3 29 191-219 217-245 (583)
462 2vc6_A MOSA, dihydrodipicolina 27.6 2.7E+02 0.0093 23.3 9.7 78 102-199 71-151 (292)
463 1yo6_A Putative carbonyl reduc 27.3 2.3E+02 0.0078 22.4 10.7 64 102-170 5-70 (250)
464 3ioy_A Short-chain dehydrogena 27.1 2.8E+02 0.0096 23.3 9.1 64 102-170 10-78 (319)
465 3bzy_B ESCU; auto cleavage pro 27.1 38 0.0013 22.7 2.3 25 193-217 27-51 (83)
466 1zja_A Trehalulose synthase; s 26.9 54 0.0018 30.7 4.2 28 192-219 79-106 (557)
467 1gee_A Glucose 1-dehydrogenase 26.7 2.5E+02 0.0084 22.5 9.7 65 102-171 9-77 (261)
468 3ic5_A Putative saccharopine d 26.7 1.5E+02 0.0052 20.1 8.3 90 102-210 7-97 (118)
469 2akz_A Gamma enolase, neural; 26.6 78 0.0027 28.6 5.1 92 110-211 273-368 (439)
470 3av3_A Phosphoribosylglycinami 26.6 2.3E+02 0.0078 22.5 7.4 88 104-196 8-101 (212)
471 4aef_A Neopullulanase (alpha-a 26.4 48 0.0016 31.7 3.8 28 191-218 284-311 (645)
472 4a29_A Engineered retro-aldol 26.4 81 0.0028 26.2 4.6 50 157-212 110-159 (258)
473 1tks_A 3,4-dihydroxy-2-butanon 26.4 1E+02 0.0035 24.6 5.0 36 173-211 159-194 (204)
474 1m53_A Isomaltulose synthase; 26.4 49 0.0017 31.1 3.8 28 192-219 92-119 (570)
475 2bhu_A Maltooligosyltrehalose 26.2 61 0.0021 30.7 4.4 29 191-219 191-219 (602)
476 3d3w_A L-xylulose reductase; u 26.2 2.4E+02 0.0083 22.3 10.8 71 101-178 8-81 (244)
477 1uok_A Oligo-1,6-glucosidase; 26.0 50 0.0017 30.9 3.8 28 192-219 78-105 (558)
478 3i6i_A Putative leucoanthocyan 26.0 3E+02 0.01 23.2 9.2 102 101-216 11-121 (346)
479 1vl0_A DTDP-4-dehydrorhamnose 25.9 2.1E+02 0.0071 23.4 7.5 89 99-210 11-109 (292)
480 2pd6_A Estradiol 17-beta-dehyd 25.9 2.6E+02 0.0088 22.4 9.0 33 101-133 8-40 (264)
481 3u5t_A 3-oxoacyl-[acyl-carrier 25.8 2.7E+02 0.0093 22.7 10.2 94 102-200 29-134 (267)
482 1h5q_A NADP-dependent mannitol 25.7 2.6E+02 0.0088 22.4 10.2 65 102-171 16-84 (265)
483 3e48_A Putative nucleoside-dip 25.7 2.2E+02 0.0076 23.2 7.6 43 162-207 55-98 (289)
484 3lkv_A Uncharacterized conserv 25.5 2.6E+02 0.0089 23.3 8.1 148 53-214 21-177 (302)
485 1gjw_A Maltodextrin glycosyltr 25.3 41 0.0014 32.1 3.1 30 192-221 181-210 (637)
486 2ywr_A Phosphoribosylglycinami 24.9 2.2E+02 0.0075 22.7 7.0 87 104-195 6-98 (216)
487 2pju_A Propionate catabolism o 24.9 2.7E+02 0.0093 22.4 8.7 14 193-206 141-154 (225)
488 3r6d_A NAD-dependent epimerase 24.9 2.4E+02 0.0084 21.8 8.2 91 103-207 8-100 (221)
489 3edf_A FSPCMD, cyclomaltodextr 24.8 54 0.0019 31.0 3.8 29 191-219 197-225 (601)
490 3m07_A Putative alpha amylase; 24.8 67 0.0023 30.6 4.4 29 191-219 201-229 (618)
491 3aj7_A Oligo-1,6-glucosidase; 24.6 55 0.0019 30.9 3.8 28 192-219 87-114 (589)
492 1cyg_A Cyclodextrin glucanotra 24.6 50 0.0017 31.8 3.6 28 192-219 111-138 (680)
493 3tak_A DHDPS, dihydrodipicolin 24.5 2.1E+02 0.007 24.1 7.1 63 148-211 6-75 (291)
494 1m7x_A 1,4-alpha-glucan branch 24.5 71 0.0024 30.4 4.6 30 191-220 203-232 (617)
495 3si9_A DHDPS, dihydrodipicolin 24.3 3.3E+02 0.011 23.1 9.7 35 102-136 93-130 (315)
496 1sb8_A WBPP; epimerase, 4-epim 24.2 3E+02 0.01 23.2 8.4 119 77-207 10-145 (352)
497 3tla_A MCCF; serine protease, 24.1 2.3E+02 0.0078 24.9 7.4 71 121-191 40-127 (371)
498 4f6o_A Metacaspase-1; rossmann 24.0 1.7E+02 0.0057 25.6 6.4 52 83-136 77-140 (350)
499 3hr8_A Protein RECA; alpha and 24.0 1.4E+02 0.0048 26.1 6.0 125 76-211 43-193 (356)
500 1cyd_A Carbonyl reductase; sho 24.0 2.7E+02 0.0091 22.0 10.9 74 100-180 7-83 (244)
No 1
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=4e-47 Score=350.08 Aligned_cols=321 Identities=24% Similarity=0.360 Sum_probs=273.7
Q ss_pred Cc-ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCC
Q 019298 1 ME-ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGL 79 (343)
Q Consensus 1 ~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~ 79 (343)
|+ +|++....+++ ++..+.....+... .+.+.|+|+.|+|+ +++++.+.+++.+.+... ...|++..|.
T Consensus 1 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~ 70 (385)
T 1b5p_A 1 MRGLSRRVQAMKPS--ATVAVNAKALELRR---QGVDLVALTAGEPD----FDTPEHVKEAARRALAQG-KTKYAPPAGI 70 (385)
T ss_dssp CCCCCHHHHHCCCC--HHHHHHHHHHHHHH---TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCC
T ss_pred CchhhhHHhhcCcc--hHHHHHHHHHHHHh---cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCC
Confidence 44 78888888888 67777666554432 25678999999964 566789999998887654 3579888899
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
+++|+++++++.+.+|..+++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++
T Consensus 71 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 150 (385)
T 1b5p_A 71 PELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGF 150 (385)
T ss_dssp HHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTT
T ss_pred HHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCC
Confidence 99999999999988888889999999999999999999999999999999999999999999999999999998765678
Q ss_pred CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (343)
Q Consensus 160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 239 (343)
.+|+++++++++++++++++++||||||.+++.+++++|+++|++||+++|+||+|+.+.+++ ...++..+.. +++++
T Consensus 151 ~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~ 228 (385)
T 1b5p_A 151 VPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLT 228 (385)
T ss_dssp CCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEE
T ss_pred CCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEE
Confidence 899999999998888999999999999999999999999999999999999999999998876 4445555554 78999
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh---hHHHHH-HHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST---IMQIMI-HGNFLENF 314 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~---~~~~l~-~~~~~~~~ 314 (343)
++||||.|+++|+|+||++++ ++++++++.... ...+++.+.|.++ ..+|+. ..++++ .+++++++
T Consensus 229 ~~s~SK~~~~~G~RiG~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~ 299 (385)
T 1b5p_A 229 VNGAAKAFAMTGWRIGYACGP--------KEVIKAMASVSRQSTTSPDTIAQWAT-LEALTNQEASRAFVEMAREAYRRR 299 (385)
T ss_dssp EEESTTTTTCGGGCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHH-HHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred EEechhhcCCcccceEEEEeC--------HHHHHHHHHHHhhccCCCCHHHHHHH-HHHHhCCCcchHHHHHHHHHHHHH
Confidence 999999999999999999985 368888877654 2457788888887 667754 345555 88999999
Q ss_pred HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 315 AGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus 300 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 327 (385)
T 1b5p_A 300 RDLLLEGLTAL-GLKAVRPSGAFYVLMDT 327 (385)
T ss_dssp HHHHHHHHHHH-TCCBCCCSBTTEEEEEC
T ss_pred HHHHHHHHHHC-CCeecCCCeeEEEEEec
Confidence 99999999988 88887899999999764
No 2
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=1.5e-46 Score=347.07 Aligned_cols=326 Identities=12% Similarity=0.075 Sum_probs=257.4
Q ss_pred ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCC-CCCCCCCCcHHHHHHHHHHH-hcCCCCCCCCCCCCH
Q 019298 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEAL-LSEKFNGYAPTAGLP 80 (343)
Q Consensus 3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~g~~ 80 (343)
++.+....+++ +++.+...+.++. ..++|||++|.+ +..+.+.+++.++++++ .. ......+|++..|.+
T Consensus 4 ~~~~~~~~~~~--~i~~~~~~~~~~~-----~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~ 75 (405)
T 3k7y_A 4 LLSSLENIEVD--NILKTAREFKEDT-----CEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTE 75 (405)
T ss_dssp GGGGCCCCCCC--HHHHHHHHHTTSS-----CSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCH
T ss_pred hhhcCCCCCCC--hHHHHHHHHhcCC-----CcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcH
Confidence 45677788887 7899988777765 568899999984 32233567888998877 54 344567899999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCc--EEEecChHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~--i~~~~g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 156 (343)
+||+++++|+.++.+..+++++ +++|+|+++++..++.++.. + |+|++++|+|..|...++..|.+++.+++..+
T Consensus 76 ~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~ 154 (405)
T 3k7y_A 76 DFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDY 154 (405)
T ss_dssp HHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEET
T ss_pred HHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEecccc
Confidence 9999999999776665667775 59999999999999999987 8 99999999999999999999999999998555
Q ss_pred CCCCCCHHHHHhhhcC--CceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCccccc
Q 019298 157 KGWEVDLDDIESLADQ--NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVF 231 (343)
Q Consensus 157 ~~~~~d~~~l~~~~~~--~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~ 231 (343)
+++++|++.+++.+++ .+++++++.| |||||.+++.+++++|+++|++|++++|+||+|.++.+++. ...++..+
T Consensus 155 ~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~ 234 (405)
T 3k7y_A 155 NLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKF 234 (405)
T ss_dssp TTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHH
T ss_pred ccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHH
Confidence 5789999999998864 4567777665 89999999999999999999999999999999999988642 12222222
Q ss_pred -CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh----hhh-ccccCcchHHHHHHHhccchhh---H
Q 019298 232 -GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK----KYF-DILGDPATFIQVCIMYGCLSTI---M 302 (343)
Q Consensus 232 -~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~----~~~-~~~~~~~~~~~~a~~~~~l~~~---~ 302 (343)
...+++|+++||||+|+++|+|+||+++... ++++++++. ... ....+++.++|.++ ..+|.+. .
T Consensus 235 ~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~-~~~l~~~~l~~ 308 (405)
T 3k7y_A 235 EEKNIAFSVCQSFSKNMSLYGERAGALHIVCK-----NQEEKKIVFNNLCFIVRKFYSSPVIHTNRIL-CQLLNNQNLKL 308 (405)
T ss_dssp HTTTCCEEEEEECTTTSCCTTTTEEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH-HHHHHCHHHHH
T ss_pred HhcCCcEEEEeeCCccCCCccccceEEEEEeC-----CHHHHHHHHHHHHHHHhcccCCCcHHHHHHH-HHHhCCHHHHH
Confidence 2346899999999999999999999875321 245555443 332 23446677888877 6666653 2
Q ss_pred HHHH----HHHHHHHHHHHHHHhhc----CCC---CceeeCCCCceEeeecC
Q 019298 303 QIMI----HGNFLENFAGSCVPSYK----LIP---ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 303 ~~l~----~~~~~~~~~~~~~~~L~----~~~---g~~~~~~~~g~~~~~~l 343 (343)
+|.+ .+++++++|+.+.+.|+ +++ +|.+..|+||+|+|+++
T Consensus 309 ~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l 360 (405)
T 3k7y_A 309 NWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPL 360 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCC
Confidence 3443 67889999999999999 762 26777999999999864
No 3
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=2.6e-46 Score=349.25 Aligned_cols=321 Identities=38% Similarity=0.697 Sum_probs=269.2
Q ss_pred cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP 95 (343)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 95 (343)
+++.++..+..+.. .++++|+|+.|.|+..+.+++++.+++++.+++......+|++..|.+++|+++++++.+. +
T Consensus 38 ~i~~~~~~~~~~~~---~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~ 113 (427)
T 3dyd_A 38 PIRAIVDNMKVKPN---PNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-E 113 (427)
T ss_dssp ---------CCCCC---TTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-T
T ss_pred hHHHHHHHHhhccc---CCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-C
Confidence 57888776665442 3567899999998765568899999999999988766678998899999999999999764 6
Q ss_pred CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCce
Q 019298 96 YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175 (343)
Q Consensus 96 ~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 175 (343)
..+++++|++|+|+++++..+++.+.++||+|+++.|+|..+...++..|.+++.+++.+++++.+|++++++.++++++
T Consensus 114 ~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 193 (427)
T 3dyd_A 114 APLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTA 193 (427)
T ss_dssp BCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEE
T ss_pred CCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCC
Confidence 66889999999999999999999999999999999999999999999999999999987777888999999999988899
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255 (343)
Q Consensus 176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 255 (343)
++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++....++..+....++++++|+||.|+++|+|+|
T Consensus 194 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG 273 (427)
T 3dyd_A 194 CLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLG 273 (427)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCE
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceE
Confidence 99999999999999999999999999999999999999999999887766666666666789999999999999999999
Q ss_pred EEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
|++++++.... .+++++.++......++++++.|.++ .++|.+ ..++++ .+++++++++.+.+.|+++||+.+..|
T Consensus 274 ~~~~~~~~~~~-~~~i~~~l~~~~~~~~~~~~~~~~a~-~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p 351 (427)
T 3dyd_A 274 WILIHDRRDIF-GNEIRDGLVKLSQRILGPCTIVQGAL-KSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRP 351 (427)
T ss_dssp EEEEECSTTSS-HHHHHHHHHHHHHHHCCSCHHHHHHH-HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECC
T ss_pred EEEecCcchhh-HHHHHHHHHHHHhccCCCCHHHHHHH-HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence 99997643221 13577777766543567888999888 666663 244444 888999999999999999999998799
Q ss_pred CCceEeeec
Q 019298 334 TGSSLKYLD 342 (343)
Q Consensus 334 ~~g~~~~~~ 342 (343)
++|+|+|++
T Consensus 352 ~~g~~~~~~ 360 (427)
T 3dyd_A 352 SGAMYLMVG 360 (427)
T ss_dssp SBTTEEEEE
T ss_pred CeeEEEEEe
Confidence 999999975
No 4
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=1.7e-44 Score=332.67 Aligned_cols=324 Identities=21% Similarity=0.294 Sum_probs=271.7
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|++|+|..+.+++ ++..+.....+.. ..++++++|+.|.++ ++.++.+.+++.+++... ...|++..|..
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~ 70 (388)
T 1j32_A 1 MKLAARVESVSPS--MTLIIDAKAKAMK---AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEP 70 (388)
T ss_dssp CCCCHHHHTSCCC--SSTTTHHHHHHHH---TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred CchhhHhHhCCcc--HHHHHHHHHHHHH---hcCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence 6788888888877 4555555444432 126788999999953 567899999999988654 35799888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
++|+++++++.+.+|..+++++|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.++.++++++.
T Consensus 71 ~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 150 (388)
T 1j32_A 71 RLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFK 150 (388)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTC
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCC
Confidence 99999999999888887889999999999999999999999999999999999999999999999999999887655678
Q ss_pred CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEE
Q 019298 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPIL 238 (343)
Q Consensus 161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i 238 (343)
+|+++|++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+++....++..+.. .++++
T Consensus 151 ~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (388)
T 1j32_A 151 VSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSV 230 (388)
T ss_dssp CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEE
T ss_pred CCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEE
Confidence 9999999999888899999999999999999999999999999999999999999999887655445544442 45789
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG 316 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~ 316 (343)
+++|+||.|+++|+|+||++++ ++++++++.... ...+++++.+.++ ..+|....++++ .+++++++++
T Consensus 231 ~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~ 301 (388)
T 1j32_A 231 VCSGFAKTYAMTGWRVGFLAGP--------VPLVKAATKIQGHSTSNVCTFAQYGA-IAAYENSQDCVQEMLAAFAERRR 301 (388)
T ss_dssp EEEESTTTTTCTTTCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHH-HHHHHSCSHHHHHHHHHHHHHHH
T ss_pred EEeechhccCCcccceEEEEeC--------HHHHHHHHHHHhhcccCCCHHHHHHH-HHHHhCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999985 368888876643 3457788888777 556654345555 8889999999
Q ss_pred HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 317 SCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.+.|+++||+.+..+++|+|+|+++
T Consensus 302 ~l~~~L~~~~g~~~~~~~~~~~~~~~~ 328 (388)
T 1j32_A 302 YMLDALNAMPGLECPKPDGAFYMFPSI 328 (388)
T ss_dssp HHHHHHHTCTTCBCCCCCBTTEECCBC
T ss_pred HHHHHHhhCCCCcccCCCeeEEEEEec
Confidence 999999998899987889999999864
No 5
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=1.4e-44 Score=336.88 Aligned_cols=328 Identities=14% Similarity=0.169 Sum_probs=264.9
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccC---CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMG---DPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA 77 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~ 77 (343)
|++++|....+++ +++.+...+.++. .+++|||+.| +|+ ...++++.+++++.+++......+|++..
T Consensus 22 ~~~~~~~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~G~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~ 92 (420)
T 4f4e_A 22 MSLFSAVELAPRD--PILGLNEAFNADT-----RPTKVNLGVGVYTNED--GKIPLLRAVRDAEKARVEAGLPRGYLPID 92 (420)
T ss_dssp CCTTTTCCCCCCC--HHHHHHHHHHHCC-----CSSCEECCCCSCCCTT--SCCCCCHHHHHHHHHHHHTCCCCCCCCTT
T ss_pred cCHhhcCCcCCCC--hHHHHHHHHHhcC-----CCCcEEeeeeeeECCC--CCccCcHHHHHHHHHHhccCCCCCCCCCC
Confidence 6789999999988 8999988887765 5688999999 444 33456699999999998875567899999
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCC--cEEEecChHHHHHHHHH--HhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMA--LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~al~~~~~--~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 153 (343)
|.+++|+++++++.+..+..++++ +|++|+|+++++..+++ .++++||+|++++|+|.++...++..|.+++.+++
T Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~ 172 (420)
T 4f4e_A 93 GIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPY 172 (420)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEEC
T ss_pred CcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeee
Confidence 999999999999976444344678 89999999999999954 55789999999999999999999999999999998
Q ss_pred CCCCCCCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCccc
Q 019298 154 LPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMG 229 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~~~ 229 (343)
..++++.+|++.+++.++ ++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++.
T Consensus 173 ~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 252 (420)
T 4f4e_A 173 YDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVR 252 (420)
T ss_dssp EETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHH
T ss_pred eccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHH
Confidence 544678899999999987 5678889999999999999999999999999999999999999999998752 223333
Q ss_pred cc-CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH----Hhhhh-ccccCcchHHHHHHHhccchhh--
Q 019298 230 VF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER----MKKYF-DILGDPATFIQVCIMYGCLSTI-- 301 (343)
Q Consensus 230 ~~-~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~----l~~~~-~~~~~~~~~~~~a~~~~~l~~~-- 301 (343)
.+ ...+++++++||||+|+++|+|+||+++..+ +++++++ ++... ..+.+++.+.|.++ ..+|.+.
T Consensus 253 ~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~l 326 (420)
T 4f4e_A 253 LFAAANLNVFVSSSFSKSFSLYGERVGALSIITD-----SKDEAARVLSQLKRVIRTNYSNPPTHGGAIV-AAVLASPEL 326 (420)
T ss_dssp HHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHH-HHHHHCHHH
T ss_pred HHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcC-----CHHHHHHHHHHHHHHHhcccCCCCHHHHHHH-HHHhcCHHH
Confidence 33 2456899999999999999999999875321 2344443 33322 23456677888777 5555542
Q ss_pred ----HHHHH-HHHHHHHHHHHHHHhhcCC---CCceeeCCCCceEeeecC
Q 019298 302 ----MQIMI-HGNFLENFAGSCVPSYKLI---PELINFKSTGSSLKYLDL 343 (343)
Q Consensus 302 ----~~~l~-~~~~~~~~~~~~~~~L~~~---~g~~~~~~~~g~~~~~~l 343 (343)
.++++ .+++++++++.+.+.|+++ +|+.+..|++|+|+|+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~ 376 (420)
T 4f4e_A 327 RASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGL 376 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCC
Confidence 23333 8899999999999999886 478877899999999874
No 6
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=1.2e-43 Score=327.20 Aligned_cols=319 Identities=25% Similarity=0.391 Sum_probs=269.4
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|++|+|....+++ .+..+.....+. +++|+|+.|.++ +++++.+.+++.+++... ...|++..|..
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~-------~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~ 66 (389)
T 1gd9_A 1 MALSDRLELVSAS--EIRKLFDIAAGM-------KDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLL 66 (389)
T ss_dssp -CHHHHHHHSCCC--HHHHHHHHHHTC-------SSCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred CchhhHhHhCChh--HHHHHHHHHhhh-------cCeEecCCCCCC----CCCCHHHHHHHHHHHhCC-CCCCCCCCCcH
Confidence 6788899888887 677776654432 468999999954 567899999999988764 35798888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCc-EEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~-i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
++|+++++++.+.+|..+++++ |++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.+++++++++
T Consensus 67 ~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 146 (389)
T 1gd9_A 67 ELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEF 146 (389)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTT
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCC
Confidence 9999999999887787788899 999999999999999999999999999999999999999999999999998755567
Q ss_pred CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEE
Q 019298 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL 238 (343)
Q Consensus 160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i 238 (343)
.+|+++|+++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..+.. .++++
T Consensus 147 ~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (389)
T 1gd9_A 147 RLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTI 226 (389)
T ss_dssp CCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEE
T ss_pred CCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEE
Confidence 89999999999888899999999999999999999999999999999999999999999887653444444432 45789
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHH--HHH-HHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQ--IMI-HGNFLENF 314 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~--~l~-~~~~~~~~ 314 (343)
+++|+||.|+++|+|+||++++ ++++++++.... ..++++++.|.++ ..+|..... +++ .+++++++
T Consensus 227 ~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~ 297 (389)
T 1gd9_A 227 TVNGFSKTFAMTGWRLGFVAAP--------SWIIERMVKFQMYNATCPVTFIQYAA-AKALKDERSWKAVEEMRKEYDRR 297 (389)
T ss_dssp EEEESTTTTTCGGGCCEEEECC--------HHHHHHHHHHHTTTTCSCCHHHHHHH-HHHHTCHHHHHHHHHHHHHHHHH
T ss_pred EEecChhhcCCcccceEEEEEC--------HHHHHHHHHHHhhhccCCCHHHHHHH-HHHHhCCCcchHHHHHHHHHHHH
Confidence 9999999999999999999985 368888877654 3457788888887 667765444 555 88889999
Q ss_pred HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 315 AGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus 298 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 325 (389)
T 1gd9_A 298 RKLVWKRLNEM-GLPTVKPKGAFYIFPRI 325 (389)
T ss_dssp HHHHHHHHHHT-TCCCCCCCBTTEECCBC
T ss_pred HHHHHHHHHHc-CCeecCCCeeeEEEEec
Confidence 99999999988 88877889999999864
No 7
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=7.1e-44 Score=331.28 Aligned_cols=324 Identities=19% Similarity=0.267 Sum_probs=252.8
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|.+|++..+.+++ .+..+.....+.. .++.++|||+.|.++ +++++.+.+++.+++.....+.|++..|..
T Consensus 8 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~ 78 (412)
T 2x5d_A 8 ARRFARIDRLPPY--VFNITAELKMAAR---RRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIP 78 (412)
T ss_dssp ---------------CHHHHHHHHHHHH---HTTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCH
T ss_pred cchhHHHhhcCch--HHHHHHHHHHHHh---hcCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcH
Confidence 4577787777766 5555544433221 236789999999953 567899999999887654456798878999
Q ss_pred HHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
++|+++++++.+.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++
T Consensus 79 ~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 158 (412)
T 2x5d_A 79 RLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDF 158 (412)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCH
T ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCC
Confidence 99999999998877877788 79999999999999999999999999999999999999999999999999988765466
Q ss_pred CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEE
Q 019298 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL 238 (343)
Q Consensus 160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i 238 (343)
.+|+++++++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..+.. .++++
T Consensus 159 ~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i 238 (412)
T 2x5d_A 159 FNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAV 238 (412)
T ss_dssp HHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEE
T ss_pred CCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEE
Confidence 68899999999888899999999999999999999999999999999999999999999886654444444433 46889
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG 316 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~ 316 (343)
+++|+||.|+++|+|+||++++ +++++.++.... ..++++++.|.++ ..+|....++++ .+++++++++
T Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~ 309 (412)
T 2x5d_A 239 EFFTLSKSYNMAGWRIGFMVGN--------PELVSALARIKSYHDYGTFTPLQVAA-IAALEGDQQCVRDIARQYQQRRD 309 (412)
T ss_dssp EEEECC-CCSCTTSCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHHSCSHHHHHHHHHHHHHHH
T ss_pred EEecCccccCCcccceEEEEcC--------HHHHHHHHHHHhhhccCCCHHHHHHH-HHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999984 468888876643 2467788888888 666765445555 8889999999
Q ss_pred HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 317 SCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.+.|+++ |+.+..+++|+|+|+++
T Consensus 310 ~l~~~L~~~-g~~~~~~~~g~~~~~~~ 335 (412)
T 2x5d_A 310 VLVKGLREA-GWMVENPKASMYVWAKI 335 (412)
T ss_dssp HHHHHHHHH-TCCCCCCSBSSEEEEEC
T ss_pred HHHHHHHHC-CCEecCCCeeeEEEEEc
Confidence 999999988 78877888999999864
No 8
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=8.3e-44 Score=331.65 Aligned_cols=319 Identities=22% Similarity=0.343 Sum_probs=272.1
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCC
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGL 79 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~ 79 (343)
+.+|+|....+++ .++.+..... +.++|+|+.|.|+ +++++.+.+++.+++.... ..+|++..|.
T Consensus 4 ~~~~~~~~~~~~~--~~~~~~~~~~--------~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~ 69 (422)
T 3fvs_A 4 QLQARRLDGIDYN--PWVEFVKLAS--------EHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGY 69 (422)
T ss_dssp CCSCGGGTTCCCC--HHHHHHHHHH--------TSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCC
T ss_pred hhHHHHhhccCcc--HHHHHHHHhh--------cCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCC
Confidence 3578888888877 6666654321 4578999999954 6789999999999987643 4689988899
Q ss_pred HHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC---
Q 019298 80 PLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP--- 155 (343)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--- 155 (343)
+++|+++++++++.+|..+++ ++|++|+|+++++..+++.++++||+|+++.|+|..+...++..|.+++.+++++
T Consensus 70 ~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 149 (422)
T 3fvs_A 70 PPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPI 149 (422)
T ss_dssp HHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCC
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccc
Confidence 999999999999888888888 7999999999999999999999999999999999999999999999999998875
Q ss_pred -------CCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcc
Q 019298 156 -------DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM 228 (343)
Q Consensus 156 -------~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~ 228 (343)
++++.+|+++++++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++
T Consensus 150 ~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 229 (422)
T 3fvs_A 150 QNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISI 229 (422)
T ss_dssp CSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCG
T ss_pred cccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCCh
Confidence 2356799999999998889999999999999999999999999999999999999999999999887665565
Q ss_pred cccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh------
Q 019298 229 GVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST------ 300 (343)
Q Consensus 229 ~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~------ 300 (343)
..+.. .+++++++|+||.|+++|+|+||++++ +++++.+..... ..++++++.+.++ ..+|.+
T Consensus 230 ~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~ 300 (422)
T 3fvs_A 230 ASLPGMWERTLTIGSAGKTFSATGWKVGWVLGP--------DHIMKHLRTVHQNSVFHCPTQSQAAV-AESFEREQLLFR 300 (422)
T ss_dssp GGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECC--------HHHHHHHHHHHHTTTCCCCHHHHHHH-HHHHHHHHHTTT
T ss_pred hhcccccCcEEEEecchhccCCccceEEEEEeC--------HHHHHHHHHHHhhccCCCCcHHHHHH-HHHHhhcccccc
Confidence 55543 468999999999999999999999985 368888876643 3567788888888 555543
Q ss_pred -hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 301 -IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 301 -~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
...+++ .+++++++++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 344 (422)
T 3fvs_A 301 QPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKPIIPQGSYFLITDI 344 (422)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEEC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEec
Confidence 234444 8899999999999999998 89877999999999864
No 9
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.5e-43 Score=329.40 Aligned_cols=305 Identities=30% Similarity=0.537 Sum_probs=254.6
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhh------hCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR------DLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~------~~~~~~~~~~i~~~~ 107 (343)
+.++|+|+.|.|..++.+++++.+.+++.+++.......|++..|..++|+++++++++ .+|..+++++|++|+
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~ 111 (416)
T 1bw0_A 32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCS 111 (416)
T ss_dssp CSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEES
T ss_pred CCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeC
Confidence 46789999999864445788999999999998765556898888999999999999982 256667889999999
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcc
Q 019298 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG 187 (343)
|+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++.+|+++|++.++++++++++++|+||||
T Consensus 112 g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG 191 (416)
T 1bw0_A 112 GGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCG 191 (416)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCC
Confidence 99999999999999999999999999999999999999999999887655678999999999988889999999999999
Q ss_pred cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC----CCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCC-
Q 019298 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK----PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP- 262 (343)
Q Consensus 188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~----~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~- 262 (343)
.+++.+++++|+++|++||+++|+||+|..+.+++. ...++..+...+++++++|+||.|+++|+|+||++++++
T Consensus 192 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~ 271 (416)
T 1bw0_A 192 SNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPH 271 (416)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTT
T ss_pred cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCch
Confidence 999999999999999999999999999999988765 444555555555789999999999999999999999764
Q ss_pred CCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEee
Q 019298 263 CGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKY 340 (343)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~ 340 (343)
... ..+...++......++++++.|.++ ..+|+. ...+++ .+++++++++.+.+.|+++||+.+..|++|+|+|
T Consensus 272 ~~~---~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 347 (416)
T 1bw0_A 272 GNG---PSFLEGLKRVGMLVCGPCTVVQAAL-GEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLM 347 (416)
T ss_dssp CSC---HHHHHHHHHHHHHHTCSCHHHHHHH-HHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEE
T ss_pred hhH---HHHHHHHHHHhccccCCCcHHHHHH-HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEE
Confidence 211 1344444433222456788888888 666653 134444 8888999999999999998899877888999999
Q ss_pred ec
Q 019298 341 LD 342 (343)
Q Consensus 341 ~~ 342 (343)
++
T Consensus 348 ~~ 349 (416)
T 1bw0_A 348 SR 349 (416)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 10
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-43 Score=333.67 Aligned_cols=295 Identities=23% Similarity=0.359 Sum_probs=253.2
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.++|||+.|.|+ +++++.+.+++.+++.......|++..|.+++|+++++++.+.+|.++++++|++|+|+++++
T Consensus 56 ~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al 131 (447)
T 3b46_A 56 GRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGI 131 (447)
T ss_dssp TSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHH
T ss_pred CCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 6689999999964 567899999999998753346899988999999999999988888888889999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC----------CCCCCHHHHHhhhcCCceEEEEeCCC
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK----------GWEVDLDDIESLADQNTVALVIINPG 183 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~d~~~l~~~~~~~~~~i~~~~p~ 183 (343)
..++++++++||+|++++|+|..+...++..|.+++.+++++++ ++.+|+++|+++++++++++++++|+
T Consensus 132 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~ 211 (447)
T 3b46_A 132 LSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPH 211 (447)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSC
T ss_pred HHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCC
Confidence 99999999999999999999999999999999999999886543 57899999999998888999999999
Q ss_pred CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc--CCCCCEEEEccCccccCCCCCcEEEEEE-e
Q 019298 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF--GSTVPILTLGSLSKRWIVPGWRLGWFVT-T 260 (343)
Q Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~i~~-~ 260 (343)
||||.+++.+++++|+++|++||+++|+||+|..+.+++ ...++..+ +..+++++++|+||.|+++|+|+||+++ +
T Consensus 212 nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~ 290 (447)
T 3b46_A 212 NPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLN 290 (447)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSC
T ss_pred CCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCC
Confidence 999999999999999999999999999999999998876 32334333 1235899999999999999999999998 4
Q ss_pred CCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCc
Q 019298 261 DPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGS 336 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g 336 (343)
+++++.++.... ..++++++.|.++ ..+|... ..+++ .+++++++++.+.+.|+++ |+.+..|++|
T Consensus 291 --------~~l~~~l~~~~~~~~~~~~~~~~~a~-~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g 360 (447)
T 3b46_A 291 --------AELLSYAAKAHTRICFASPSPLQEAC-ANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLPYTAPEGT 360 (447)
T ss_dssp --------HHHHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCCEECCSBS
T ss_pred --------HHHHHHHHHHHhhccCCCChHHHHHH-HHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCee
Confidence 368888876542 3556788888887 6666653 34444 8899999999999999988 8887789999
Q ss_pred eEeeecC
Q 019298 337 SLKYLDL 343 (343)
Q Consensus 337 ~~~~~~l 343 (343)
+|+|+++
T Consensus 361 ~~~~~~~ 367 (447)
T 3b46_A 361 YFVLVDF 367 (447)
T ss_dssp SEEEEEC
T ss_pred EEEEEec
Confidence 9999874
No 11
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=4.6e-43 Score=323.52 Aligned_cols=316 Identities=20% Similarity=0.289 Sum_probs=257.4
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|.+| |..+.+++ .+..+.....+-. .+++++|||+.|++. +++++.+.+++.+++.+. ...|++..|..
T Consensus 3 ~~~~-~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~ 71 (391)
T 3h14_A 3 LKNS-SRSAVDPF--IVMDVMEAARRAE---EAGRRIIHMEVGQPG----TGAPRGAVEALAKSLETD-ALGYTVALGLP 71 (391)
T ss_dssp CCCC-STTCCCCC--TTHHHHHHHHHHH---HTTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCH
T ss_pred chhh-hHhhcCcc--hHHHHHHHHHHHH---hcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCChH
Confidence 4677 88888877 6666665544432 237789999999954 677899999999988754 35899888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
++|+++++++.+.+|.++++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++.
T Consensus 72 ~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 151 (391)
T 3h14_A 72 ALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQ 151 (391)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTS
T ss_pred HHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCC
Confidence 99999999999888888999999999999999999999999999999999999999999999999999999998767788
Q ss_pred CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (343)
Q Consensus 161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (343)
+|++++++. +++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++... ....+ .++++++
T Consensus 152 ~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~ 225 (391)
T 3h14_A 152 PVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVI 225 (391)
T ss_dssp CCHHHHTTS---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEE
T ss_pred CCHHHHHhc---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEE
Confidence 999999887 78999999999999999999999999999999999999999999998876532 22222 4678999
Q ss_pred ccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHH
Q 019298 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSC 318 (343)
Q Consensus 241 ~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~ 318 (343)
+|+||.|+++|+|+||+++++ ++++.++.... ...+++++.+.++ .++|.. .++++ .+++++++++.+
T Consensus 226 ~s~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~-~~~~~~~~~~~~~~~~~l 295 (391)
T 3h14_A 226 NSFSKYFSMTGWRVGWMVVPE--------DQVRVVERIAQNMFICAPHASQVAA-LAALDC-DAELQANLDVYKANRKLM 295 (391)
T ss_dssp EESSSTTCCTTSCCEEEECCG--------GGHHHHHHHHHHTTCCCCHHHHHHH-HHHTTC-HHHHHHHHHHHHHHHHHH
T ss_pred EechhccCCccceeEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHH-HHHhCC-hHHHHHHHHHHHHHHHHH
Confidence 999999999999999999853 57777776643 3457788888877 566663 44554 889999999999
Q ss_pred HHhhcCCCCceeeCCCCceEeeecC
Q 019298 319 VPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 319 ~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.|++++...+..|++++|+|+++
T Consensus 296 ~~~l~~~~~~~~~~~~~~~~~~~~~ 320 (391)
T 3h14_A 296 LERLPKAGFTRIAPPDGAFYVYADV 320 (391)
T ss_dssp HHHHHHHTCCCBCCCCBTTEEEEEC
T ss_pred HHHHHHcCCCcccCCCeeEEEEEec
Confidence 9999988333356889999999864
No 12
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=2.3e-43 Score=331.01 Aligned_cols=315 Identities=20% Similarity=0.324 Sum_probs=262.3
Q ss_pred ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCH
Q 019298 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP 80 (343)
Q Consensus 3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~ 80 (343)
+|+|....+++ +++.+..... ++++|+|+.|.|+. .+.+++.+.+++.+++... ...+|+++.|.+
T Consensus 54 ~s~~~~~~~~s--~~~~~~~~~~--------~~~~i~l~~g~p~~--~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~ 121 (448)
T 3aow_A 54 FSKKALEMRAS--EVRELLKLVE--------TSDIISLAGGLPNP--KTFPKEIIRDILVEIMEKYADKALQYGTTKGFT 121 (448)
T ss_dssp CCHHHHHCCCC--HHHHHHHHHH--------TSSSEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCH
T ss_pred hhHHHhcCCCc--HHHHHHHhcc--------CCCcEeCCCCCCCc--hhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcH
Confidence 66777777777 6666655321 34689999999763 2447788999998888653 235799888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
+||+++++++.+.+|.+ ++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++++++ +
T Consensus 122 ~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g 197 (448)
T 3aow_A 122 PLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE---G 197 (448)
T ss_dssp HHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---E
T ss_pred HHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC---C
Confidence 99999999997777776 8899999999999999999999999999999999999999999999999999988642 4
Q ss_pred CCHHHHHhhhc----C--CceEE-EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 161 VDLDDIESLAD----Q--NTVAL-VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 161 ~d~~~l~~~~~----~--~~~~i-~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
+|+++|++.++ + +++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..++.
T Consensus 198 ~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~ 277 (448)
T 3aow_A 198 MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDN 277 (448)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCT
T ss_pred CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCC
Confidence 89999999887 5 67887 46899999999999999999999999999999999999999987765556666666
Q ss_pred CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHH-HHH
Q 019298 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMI-HGN 309 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~ 309 (343)
.+++++++||||.|+ +|+|+||++++ +++++++..... ...+++++.|.++ ..+|.+. .++++ .++
T Consensus 278 ~~~vi~~~S~SK~~~-~GlriG~v~~~--------~~l~~~l~~~~~~~~~~~~~~~q~a~-~~~L~~~~~~~~~~~~~~ 347 (448)
T 3aow_A 278 EGRVIYLGTFSKILA-PGFRIGWMVGD--------PGIIRKMEIAKQSTDLCTNVFGQVVA-WRYVDGGYLEKHIPEIRK 347 (448)
T ss_dssp TSCEEEEEESTTTTC-GGGCCEEEEEC--------HHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHTTHHHHHHHHHHH
T ss_pred CCCEEEEccchhhcc-ccccEEEEEeC--------HHHHHHHHHHHHHhcCCCCHHHHHHH-HHHHHhCCHHHHHHHHHH
Confidence 678999999999998 99999999995 368888876643 2456788999888 6667653 34444 788
Q ss_pred HHHHHHHHHHHhhcC-CC-CceeeCCCCceEeeecC
Q 019298 310 FLENFAGSCVPSYKL-IP-ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 310 ~~~~~~~~~~~~L~~-~~-g~~~~~~~~g~~~~~~l 343 (343)
.++++++.+.+.|++ +| |+.+..|++|+|+|+++
T Consensus 348 ~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~ 383 (448)
T 3aow_A 348 FYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTL 383 (448)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEc
Confidence 899999999999987 67 68877899999999875
No 13
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=3.5e-43 Score=326.16 Aligned_cols=316 Identities=22% Similarity=0.319 Sum_probs=266.7
Q ss_pred cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298 4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83 (343)
Q Consensus 4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 83 (343)
|+|....+++ .++.+... . .+.++|+|+.|.|+ +++++.+.+++++++......+|++..|..++|
T Consensus 2 ~~~~~~~~~~--~~~~~~~~----~----~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~ 67 (410)
T 3e2y_A 2 AKRIEGLDSN--VWVEFTKL----A----ADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALV 67 (410)
T ss_dssp CGGGTTCCCC--HHHHTTTT----T----TSTTSEECSSCCCC----SCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHH
T ss_pred chhhccCCcc--HHHHHHHH----h----cCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCccccCCCCCCChHHHH
Confidence 5666777766 45544321 1 25678999999954 778999999999998765566899988999999
Q ss_pred HHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC-------
Q 019298 84 RAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP------- 155 (343)
Q Consensus 84 ~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~------- 155 (343)
+++++++.+.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|..+...+...|.+++.+++.+
T Consensus 68 ~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~ 147 (410)
T 3e2y_A 68 KALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMK 147 (410)
T ss_dssp HHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSC
T ss_pred HHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecccccccccc
Confidence 99999999888888888 8999999999999999999999999999999999999999999999999998763
Q ss_pred --CCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-
Q 019298 156 --DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG- 232 (343)
Q Consensus 156 --~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~- 232 (343)
+.++.+|+++++++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++....++..+.
T Consensus 148 ~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 227 (410)
T 3e2y_A 148 WTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPG 227 (410)
T ss_dssp CBGGGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTT
T ss_pred ccccCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCC
Confidence 24567899999999988899999999999999999999999999999999999999999999998876555555554
Q ss_pred CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-------hHHH
Q 019298 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-------IMQI 304 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-------~~~~ 304 (343)
..+++++++|+||.|+++|+|+||++++ +++++.++.... ..++++++.+.++ ..+|.+ ...+
T Consensus 228 ~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~ 298 (410)
T 3e2y_A 228 MWERTITIGSAGKTFSVTGWKLGWSIGP--------AHLIKHLQTVQQNSFYTCATPLQAAL-AEAFWIDIKRMDDPECY 298 (410)
T ss_dssp CGGGEEEEEEHHHHSSCGGGCCEEEECC--------HHHHHHHHHHHHTTTCCCCHHHHHHH-HHHHHHHHTTTTSTTSH
T ss_pred ccCeEEEEecchhhcCCCCceEEEEEEC--------HHHHHHHHHHHHhhccCCChHHHHHH-HHHHHhhhccccchHHH
Confidence 3468999999999999999999999985 368888876653 3567788888888 555542 2344
Q ss_pred HH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 305 MI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 305 l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++ .+++++++++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus 299 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 337 (410)
T 3e2y_A 299 FNSLPKELEVKRDRMVRLLNSV-GLKPIVPDGGYFIIADV 337 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCeecCCCccEEEEEEc
Confidence 44 8889999999999999998 89988999999999864
No 14
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=5.5e-43 Score=323.64 Aligned_cols=325 Identities=19% Similarity=0.305 Sum_probs=263.9
Q ss_pred CcccCccccC--cCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCCC
Q 019298 1 MEISNGGIDN--TGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK---FNGYAP 75 (343)
Q Consensus 1 ~~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~ 75 (343)
|.+|+|..+. .++ .++.+.....+-.. ..+++++|||+.|.|. +++++.+.+++++++.+.. ...|++
T Consensus 2 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~ 74 (398)
T 3ele_A 2 MVVNESMYQLGSVRS--AIRELFEYGKKRAA-IVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTS 74 (398)
T ss_dssp CSSCHHHHHHHHCCC--HHHHHHHHHHHHHH-HHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCC
T ss_pred cchhHHHhccccCch--hHHHHHHHHHHHHh-hcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCC
Confidence 6788888887 455 56766554432221 1235689999999754 6678999999999887632 468988
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecC
Q 019298 76 TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLL 154 (343)
Q Consensus 76 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 154 (343)
..|.+++|+++++++.+.+|.++++++|++|+|+++++..++++++++| |+|+++.|+|..+...++..|.+++.++++
T Consensus 75 ~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~ 154 (398)
T 3ele_A 75 AQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPAD 154 (398)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCC
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC
Confidence 8899999999999999988988999999999999999999999999999 999999999999999999999999999886
Q ss_pred CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh------cCcEEEEccCCCccccCCCCCCcc
Q 019298 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK------LKTLVIADEVYGHLVFGDKPFVPM 228 (343)
Q Consensus 155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~------~~~~~i~D~ay~~~~~~~~~~~~~ 228 (343)
+ +++.+|+++|+++++++++++++++||||||.+++.+++++|+++|++ ||+++|+||+|..+.+++......
T Consensus 155 ~-~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 233 (398)
T 3ele_A 155 T-EHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV 233 (398)
T ss_dssp T-TTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCG
T ss_pred C-cCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCCh
Confidence 5 367899999999998889999999999999999999999999999999 999999999999998876543332
Q ss_pred cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHH
Q 019298 229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMI 306 (343)
Q Consensus 229 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~ 306 (343)
. ...+++++++|+||.|+++|+|+||+++++.. .....+.+.+..... ...+++.+.|.++ ..++.+..
T Consensus 234 ~--~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~---- 304 (398)
T 3ele_A 234 T--KYYDNTLVCYSYSKSLSLPGERIGYVLVPDEV--YDKAELYAAVCGAGRALGYVCAPSLFQKMI-VKCQGATG---- 304 (398)
T ss_dssp G--GTCSSEEEEEESTTTSSCTTTCCEEEECCTTS--TTHHHHHHHHHHHHHHTTCCCSCHHHHHHH-TTCTTCCC----
T ss_pred H--hhcCCeEEEEehhhcCCCccceeEEEEEcchh--hhHHHHHHHHHHHhhhccccCCCHHHHHHH-HHHhcCHH----
Confidence 2 23468899999999999999999999987532 101124444444322 1456777888888 55555321
Q ss_pred HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 307 HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 307 ~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+++++++++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus 305 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 340 (398)
T 3ele_A 305 DINAYKENRDLLYEGLTRI-GYHCFKPDGAFYMFVKA 340 (398)
T ss_dssp CHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHc-CCeecCCCeeEEEEEEc
Confidence 5678889999999999887 78888999999999864
No 15
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=2.9e-42 Score=317.64 Aligned_cols=317 Identities=22% Similarity=0.329 Sum_probs=263.3
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|..|+|.....++ .+..+.. ... ..+.|+|+.|.++ +++++.+.+++.+++... ...|++..|..
T Consensus 6 ~~~~~~~~~~~~~--~~~~~~~-~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~ 70 (386)
T 1u08_A 6 LIPQSKLPQLGTT--IFTQMSA-LAQ-------QHQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQ 70 (386)
T ss_dssp CCCCCSCCCCCCC--HHHHHHH-HHH-------HTTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred CccchhhhcCCcc--HHHHHHH-HHh-------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCH
Confidence 3457777777666 3333322 221 2467999999853 567899999999988753 45898888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
++|+++++++.+.+|.+++++ +|++|+|+++++..++++++++||+|++++|+|+.+...++..|.+++.++++.+ ++
T Consensus 71 ~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~ 149 (386)
T 1u08_A 71 ALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HF 149 (386)
T ss_dssp HHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cC
Confidence 999999999988788788898 9999999999999999999999999999999999999999999999999988653 57
Q ss_pred CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEE
Q 019298 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPIL 238 (343)
Q Consensus 160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i 238 (343)
.+|+++|++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..+. ..++++
T Consensus 150 ~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i 229 (386)
T 1u08_A 150 RVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAV 229 (386)
T ss_dssp CCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEE
T ss_pred cCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEE
Confidence 7999999999988889999999999999999999999999999999999999999999988765444444332 245789
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG 316 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~ 316 (343)
+++|+||.|+++|+|+||++++ ++++++++.... ..++++++.|.++ ..+|.....+++ .+++++++++
T Consensus 230 ~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~ 300 (386)
T 1u08_A 230 AVSSFGKTYHMTGWKVGYCVAP--------APISAEIRKVHQYLTFSVNTPAQLAL-ADMLRAEPEHYLALPDFYRQKRD 300 (386)
T ss_dssp EEEEHHHHTTCGGGCCEEEECC--------HHHHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHCTHHHHTHHHHHHHHHH
T ss_pred EEecchhhcCCcccceEEEEcC--------HHHHHHHHHHHHhhccCCChHHHHHH-HHHHhCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999985 368888876643 2456777888777 666665445565 8899999999
Q ss_pred HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 317 SCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.+.|+++ |+.+..+++|+|+|+++
T Consensus 301 ~l~~~L~~~-g~~~~~~~~g~~~~~~~ 326 (386)
T 1u08_A 301 ILVNALNES-RLEILPCEGTYFLLVDY 326 (386)
T ss_dssp HHHHHTTSS-SCEECCCCBSSEEEEEC
T ss_pred HHHHHHHHC-CCeecCCCceEEEEEec
Confidence 999999998 88887888999999864
No 16
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.1e-42 Score=321.20 Aligned_cols=318 Identities=26% Similarity=0.353 Sum_probs=264.6
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|.+|+|....+++ .+..+... .. ..+.|+|+.|.++ +++++.+.+++.+++.+. ...|++..|..
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~-~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~ 65 (411)
T 2o0r_A 1 MATVSRLRPYATT--VFAEMSAL-AT-------RIGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSA 65 (411)
T ss_dssp -CCCGGGGGGSSC--HHHHHHHH-HH-------TTTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred CchhhHhHhcCcc--HHHHHHHH-hh-------cCCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence 7889999988877 45444332 11 3457999999853 567899999999998753 45899888899
Q ss_pred HHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KG 158 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~ 158 (343)
++|+++++++.+.+|.+++++ +|++|+|+++++..++++++++||+|++++|+|..+...+...|.+++.++++++ ++
T Consensus 66 ~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~ 145 (411)
T 2o0r_A 66 PLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRG 145 (411)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTE
T ss_pred HHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccC
Confidence 999999999988788778888 9999999999999999999999999999999999999999999999999987653 34
Q ss_pred CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCE
Q 019298 159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPI 237 (343)
Q Consensus 159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~ 237 (343)
+.+|+++|+++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++..+.++..+.. .+++
T Consensus 146 ~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (411)
T 2o0r_A 146 FALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERT 225 (411)
T ss_dssp EECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGE
T ss_pred CCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCE
Confidence 679999999999888899999999999999999999999999999999999999999999887655445544433 4578
Q ss_pred EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHH
Q 019298 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFA 315 (343)
Q Consensus 238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~ 315 (343)
++++|+||.|+++|+|+||++++ +++++.++.... ..++.+++.|.++ ..+|....++++ .++++++++
T Consensus 226 i~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~ 296 (411)
T 2o0r_A 226 ITISSAAKMFNCTGWKIGWACGP--------AELIAGVRAAKQYLSYVGGAPFQPAV-ALALDTEDAWVAALRNSLRARR 296 (411)
T ss_dssp EEEEEHHHHTTCTTTCEEEEECC--------HHHHHHHHHHHHHHTSCCCTTHHHHH-HHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEeechhhcCCccceEEEEeeC--------HHHHHHHHHHHhhccCCCChHHHHHH-HHHHhCChHHHHHHHHHHHHHH
Confidence 99999999999999999999984 467887776543 2455677777777 566664445555 888999999
Q ss_pred HHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 316 GSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 316 ~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.+.+.|+++ |+.+..+++|+|+|+++
T Consensus 297 ~~l~~~L~~~-g~~~~~~~~g~~~~~~~ 323 (411)
T 2o0r_A 297 DRLAAGLTEI-GFAVHDSYGTYFLCADP 323 (411)
T ss_dssp HHHHHHHHHH-TCEECCCCBSSEEEEEC
T ss_pred HHHHHHHHHc-CCEecCCCeeEEEEEec
Confidence 9999999887 88877888999999864
No 17
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=1.6e-42 Score=320.24 Aligned_cols=318 Identities=19% Similarity=0.270 Sum_probs=259.6
Q ss_pred cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298 4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83 (343)
Q Consensus 4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 83 (343)
+++....+++ ++..+........+ .+++++|||+.|++. ++.++.+.+++.+++. ....|++..|.+++|
T Consensus 3 ~~~~~~~~~~--~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr 72 (396)
T 3jtx_A 3 NTLLKQLKPY--PFARLHEAMQGISA--PEGMEAVPLHIGEPK----HPTPKVITDALTASLH--ELEKYPLTAGLPELR 72 (396)
T ss_dssp HHHHHHCCSC--HHHHHHHHTTTCCC--CTTCCCEECSCCSCC----SCCCHHHHHHHHHTGG--GGGSCCCTTCCHHHH
T ss_pred hhhhccCCCC--hHHHHHHHHHhhhh--ccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhh--hccCCCCCCCcHHHH
Confidence 3445555655 55555443332211 347889999999944 6788999999999875 346899988999999
Q ss_pred HHHHHHHhhhCCCC-CCCC-cEEEecChHHHHHHHHHHhcCCC-----CeEEEeCCCCcchHHHHHhcCceeEEeecCCC
Q 019298 84 RAIAEYLSRDLPYK-LTPN-DVFVTSGCTQAIDVAMALLSRPG-----ANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156 (343)
Q Consensus 84 ~~ia~~~~~~~~~~-~~~~-~i~~~~g~~~al~~~~~~l~~~g-----d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 156 (343)
+++++++.+.+|.. ++++ +|++|+|+++++..++++++++| |+|+++.|+|..+...++..|.+++.+++ .+
T Consensus 73 ~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~ 151 (396)
T 3jtx_A 73 QACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PA 151 (396)
T ss_dssp HHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CT
T ss_pred HHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CC
Confidence 99999999888877 7889 99999999999999999999996 79999999999999999999999999998 44
Q ss_pred CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc----cC
Q 019298 157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV----FG 232 (343)
Q Consensus 157 ~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~----~~ 232 (343)
+++.+|+++++++++++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++..+..... +.
T Consensus 152 ~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 231 (396)
T 3jtx_A 152 PSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLG 231 (396)
T ss_dssp TTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTT
T ss_pred CCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcc
Confidence 67788999999998888999999999999999999999999999999999999999999999887633222211 11
Q ss_pred -CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298 233 -STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNF 310 (343)
Q Consensus 233 -~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~ 310 (343)
..+++++++|+||.|+++|+|+||++++ +++++.++.... ..++++++.|.++ .++|.......+.+++
T Consensus 232 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~ 302 (396)
T 3jtx_A 232 RSRQKLLMFTSLSKRSNVPGLRSGFVAGD--------AELLKNFLLYRTYHGSAMSIPVQRAS-IAAWDDEQHVIDNRRL 302 (396)
T ss_dssp CCCTTEEEEEESTTTSSCGGGCCEEEEEC--------HHHHHHHHHHHHHHTCCCCHHHHHHH-HHHHHCCHHHHHHHHH
T ss_pred cccCcEEEEeccccccCCcccceEEEEeC--------HHHHHHHHHHHhhcccCCCHHHHHHH-HHHhCCHHHHHHHHHH
Confidence 2468999999999999999999999884 478888877654 2467788888888 6666653333348899
Q ss_pred HHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 311 LENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 311 ~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++++.+.+.|+++ +.+..|++|+|+|+++
T Consensus 303 ~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~ 333 (396)
T 3jtx_A 303 YQEKFERVIPILQQV--FDVKLPDASFYIWLKV 333 (396)
T ss_dssp HHHHHHHHHHHHTTT--SCCCCCSSSSEEEEEC
T ss_pred HHHHHHHHHHHHHhc--CCccCCCeeEEEEEEC
Confidence 999999999999876 4566789999999875
No 18
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.1e-42 Score=322.12 Aligned_cols=324 Identities=16% Similarity=0.131 Sum_probs=253.1
Q ss_pred cccCcCccccHHHHHHHHHhhccccccccceeEeccCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHH
Q 019298 7 GIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRA 85 (343)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 85 (343)
....+++ ++..+...+..+. .+.+|+|+.|.| +.....+..+.+++++.+........+|++..|.+++|++
T Consensus 7 ~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 79 (401)
T 7aat_A 7 VEMGPPD--PILGVTEAFKRDT-----NSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRA 79 (401)
T ss_dssp CCCCCCC--HHHHHHHHHHHCC-----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHH
T ss_pred CCCCCCC--hhHHHHHHHhhCC-----CCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHH
Confidence 3444444 6778877776654 556899999997 4332334567889988887764445689998999999999
Q ss_pred HHHHHhhhCCCCCCCCcEEE--ecChHHHHHHHHHHhc---CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 86 IAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMALLS---RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 86 ia~~~~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~---~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
+++++.+.+|..+++++|++ |+|+++++..+++.+. ++||+|++++|+|..+...++..|.+++.++++.++++.
T Consensus 80 ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 159 (401)
T 7aat_A 80 SAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCS 159 (401)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTE
T ss_pred HHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCc
Confidence 99999887777778999977 9999999998887764 899999999999999999999999999999986656788
Q ss_pred CCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCccccc-CCC
Q 019298 161 VDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVF-GST 234 (343)
Q Consensus 161 ~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~-~~~ 234 (343)
+|++.+++.+. ++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++. ...++..+ ...
T Consensus 160 ~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
T 7aat_A 160 LDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG 239 (401)
T ss_dssp ECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred cCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcC
Confidence 99997777664 4678889999999999999999999999999999999999999999987653 12222222 344
Q ss_pred CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH----HHHHHhhhhc-cccCcchHHHHHHHhccchhh------HH
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK----VVERMKKYFD-ILGDPATFIQVCIMYGCLSTI------MQ 303 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~----~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~------~~ 303 (343)
+++++++|+||+|+++|+|+||++++.. +++ +++.++.... ...+++...|.++ ..++.+. .+
T Consensus 240 ~~~i~~~S~sK~~~~~G~RiG~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~ 313 (401)
T 7aat_A 240 IDVVLSQSYAKNMGLYGERAGAFTVICR-----DAEEAKRVESQLKILIRPMYSNPPMNGARIA-SLILNTPELRKEWLV 313 (401)
T ss_dssp CCCEEEEECTTTSCCGGGCEEEEEEECS-----SHHHHHHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHCHHHHHHHHH
T ss_pred CcEEEEecCCcccccccCceEEEEEEeC-----CHHHHHHHHHHHHHHHHhccCCCChHHHHHH-HHHhCCHHHHHHHHH
Confidence 6889999999999999999999987421 234 4455555432 2445666667666 4455442 22
Q ss_pred HHH-HHHHHHHHHHHHHHhhcCC---CCceeeCCCCceEeeecC
Q 019298 304 IMI-HGNFLENFAGSCVPSYKLI---PELINFKSTGSSLKYLDL 343 (343)
Q Consensus 304 ~l~-~~~~~~~~~~~~~~~L~~~---~g~~~~~~~~g~~~~~~l 343 (343)
+++ .+++++++++.+.+.|+++ +++.+..|++|+|+|+++
T Consensus 314 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 357 (401)
T 7aat_A 314 EVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGL 357 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCC
Confidence 233 7889999999999999876 247777899999999864
No 19
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=5.1e-43 Score=324.73 Aligned_cols=294 Identities=19% Similarity=0.260 Sum_probs=249.0
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a 112 (343)
+.++|||+.|.++ ++.++.+.+++.+++.......|++..|..++|+++++++.+.+|..+++ ++|++|+|++++
T Consensus 46 g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~a 121 (404)
T 2o1b_A 46 PLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNG 121 (404)
T ss_dssp SSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHH
T ss_pred CCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHH
Confidence 5678999999954 56789999999998764334579887899999999999998877877776 799999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
+..++++++++||+|+++.|+|..+...++..|.+++.+++++ +++.+|+++|+++++++++++++++|+||||.+++.
T Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 200 (404)
T 2o1b_A 122 LVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATK 200 (404)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCH
T ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCH
Confidence 9999999999999999999999999999999999999998865 567789999999887778899999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
+++++|+++|+++|+++|+||+|..+.+++. +.++..+. ..+++++++|+||.|+++|+|+||++++ +++
T Consensus 201 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~ 271 (404)
T 2o1b_A 201 EVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK-NPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGN--------KDM 271 (404)
T ss_dssp HHHHHHHHHHTTSSCEEEEECTTTTCBSSSC-CCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEEC--------HHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCCCCCCEEEEEecchhccCchhheEeEecC--------HHH
Confidence 9999999999999999999999999887652 23333332 2357899999999999999999999884 478
Q ss_pred HHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 272 VERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++.... ...+++++.|.++ ..+|+....+++ .+++++++++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus 272 ~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~ 343 (404)
T 2o1b_A 272 IQALKKYQTHTNAGMFGALQDAA-IYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLPFVHAKGGIYVWLET 343 (404)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEECCCBSSEEEEEC
T ss_pred HHHHHHHHhhccCCCCHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCeecCCCcceEEEEeC
Confidence 888876643 2457788888887 666665345555 8888999999999999988 88877889999999864
No 20
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=4.1e-42 Score=317.08 Aligned_cols=317 Identities=23% Similarity=0.303 Sum_probs=263.7
Q ss_pred cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298 4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83 (343)
Q Consensus 4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 83 (343)
+++....+++ .+..+.....+... .+++.|+|+.|.+. ++.++.+.+++.+++... ...|++..|..++|
T Consensus 15 ~~~~~~~~~~--~~~~~~~~~~~~~~---~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr 84 (389)
T 1o4s_A 15 SRRISEIPIS--KTMELDAKAKALIK---KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELR 84 (389)
T ss_dssp CHHHHHSCCC--SSHHHHHHHHHHHH---TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCTTCCHHHH
T ss_pred HHHHhhcCcc--HHHHHHHHHHHHHh---cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHH
Confidence 4556667766 56666665554432 26788999999853 566899999999988654 34798878999999
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCH
Q 019298 84 RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDL 163 (343)
Q Consensus 84 ~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 163 (343)
+++++++.+.+|..+++++|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.++.++++++.+|+
T Consensus 85 ~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 164 (389)
T 1o4s_A 85 EGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSL 164 (389)
T ss_dssp HHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCH
T ss_pred HHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCH
Confidence 99999998877877889999999999999999999999999999999999999999999999999999987655678999
Q ss_pred HHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEcc
Q 019298 164 DDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGS 242 (343)
Q Consensus 164 ~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S 242 (343)
++|+++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++ ...++..+.. .+++++++|
T Consensus 165 ~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s 243 (389)
T 1o4s_A 165 EEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYING 243 (389)
T ss_dssp HHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEE
T ss_pred HHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEee
Confidence 99999998888999999999999999999999999999999999999999999988765 2233444432 467899999
Q ss_pred CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHh
Q 019298 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPS 321 (343)
Q Consensus 243 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 321 (343)
+||.|+++|+|+||++++ +++++.++.... ..++++++.+.++ ..+|.+. .-+.+++++++++.+.+.
T Consensus 244 ~sK~~~~~G~r~G~l~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~--~~~~~~~~~~~~~~l~~~ 312 (389)
T 1o4s_A 244 FSKSHSMTGWRVGYLISS--------EKVATAVSKIQSHTTSCINTVAQYAA-LKALEVD--NSYMVQTFKERKNFVVER 312 (389)
T ss_dssp STTTTTCGGGCCEEEECC--------HHHHHHHHHHHHHHTCSCCHHHHHHH-HHHTTCC--CHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCcccceEEEEeC--------HHHHHHHHHHhhhcccCCCHHHHHHH-HHHHhcc--HHHHHHHHHHHHHHHHHH
Confidence 999999999999999985 368888876643 2457788888877 5566543 334788999999999999
Q ss_pred hcCCCCceeeCCCCceEeeecC
Q 019298 322 YKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 322 L~~~~g~~~~~~~~g~~~~~~l 343 (343)
|+++ |+.+..+++|+|+|+++
T Consensus 313 L~~~-g~~~~~~~~~~~~~~~~ 333 (389)
T 1o4s_A 313 LKKM-GVKFVEPEGAFYLFFKV 333 (389)
T ss_dssp HHHT-TCCCCCCSBSSEEEEEC
T ss_pred HHhc-CCeeecCCcceEEEEeC
Confidence 9988 88877888999999864
No 21
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=8.3e-42 Score=324.58 Aligned_cols=301 Identities=21% Similarity=0.308 Sum_probs=249.4
Q ss_pred ceeEeccCCCCCCCCCC-------------------------CcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHH
Q 019298 36 KVISLAMGDPTVHSCFH-------------------------TTHVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIA 87 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia 87 (343)
++|+.++|.|......+ .++.+.+++.+++... ....|+++.|.+++|++++
T Consensus 65 ~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 144 (500)
T 3tcm_A 65 EILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIA 144 (500)
T ss_dssp SCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHH
T ss_pred HhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHH
Confidence 78999999874322211 3444555556666552 4678999999999999999
Q ss_pred HHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHH
Q 019298 88 EYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI 166 (343)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 166 (343)
+++.+++|.++++++|++|+|+++++..++++++ ++||+|+++.|+|..+...++..|.+++.++++.+++|.+|+++|
T Consensus 145 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 224 (500)
T 3tcm_A 145 SGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDV 224 (500)
T ss_dssp HHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHH
T ss_pred HHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence 9999888888999999999999999999999998 899999999999999999999999999999998887899999999
Q ss_pred HhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCccc----cc---C
Q 019298 167 ESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMG----VF---G 232 (343)
Q Consensus 167 ~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~~~----~~---~ 232 (343)
++++++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|+.+.+++. ...++. .+ .
T Consensus 225 ~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~ 304 (500)
T 3tcm_A 225 KKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGE 304 (500)
T ss_dssp HHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSS
T ss_pred HHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhcccc
Confidence 999876 678999999999999999999999999999999999999999999998643 333432 12 2
Q ss_pred CCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhh-------HHH
Q 019298 233 STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTI-------MQI 304 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~-------~~~ 304 (343)
...++++++||||+| |++|+|+||+++.+. ++++++.+.+......+++.+.|.++ ..++..+ ..|
T Consensus 305 ~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~ 378 (500)
T 3tcm_A 305 EDLPLVSYQSVSKGYYGECGKRGGYFEITGF-----SAPVREQIYKIASVNLCSNITGQILA-SLVMNPPKASDESYASY 378 (500)
T ss_dssp SCCCEEEEEESSSTTTCCGGGCCEEEEEESC-----CTTHHHHHHHHHHTTCCCCHHHHHHH-HHHHSCCCSSSTHHHHH
T ss_pred CCeEEEEEecCCccCCCCCccceEEEEEeCC-----CHHHHHHHHHHHhcccCCCHHHHHHH-HHHhcCccccchhHHHH
Confidence 334689999999999 899999999998421 13588888877665678888888888 5555421 123
Q ss_pred HH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 305 MI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 305 l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
.+ .+++++++++.+.+.|+++||+.+..|++|+|+|++
T Consensus 379 ~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~ 420 (500)
T 3tcm_A 379 KAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQ 420 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeee
Confidence 22 788899999999999999999998899999999953
No 22
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=2.2e-42 Score=320.66 Aligned_cols=326 Identities=26% Similarity=0.398 Sum_probs=260.0
Q ss_pred cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL 81 (343)
Q Consensus 2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~ 81 (343)
.+|+|..+.+++ .+..+. ...+.. ..+++.|+|+.|.+... .++.++.+.+++.+++... ...|++..|..+
T Consensus 11 ~~~~~~~~~~~~--~~~~~~-~~~~~~---~~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~ 82 (406)
T 1xi9_A 11 RASKRALSVEYA--IRDVVL-PARELE---KKGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPE 82 (406)
T ss_dssp CCCHHHHTCCC----------CHHHHH---HTTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHH
T ss_pred hHHHHHhcCChh--HHHHHH-HHHHHH---HcCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHH
Confidence 356777778777 444544 222222 22678999999996311 3567899999999988654 347988889999
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCC
Q 019298 82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV 161 (343)
Q Consensus 82 lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 161 (343)
+|+++++++.+.+|.++++++|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.+++++++++.+
T Consensus 83 l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 162 (406)
T 1xi9_A 83 LRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQP 162 (406)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEE
T ss_pred HHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcC
Confidence 99999999998888888999999999999999999999999999999999999999999999999999998875456779
Q ss_pred CHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEE
Q 019298 162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTL 240 (343)
Q Consensus 162 d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~ 240 (343)
|+++|++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++ ...++..++ .++ ++++
T Consensus 163 d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~ 240 (406)
T 1xi9_A 163 DIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVM 240 (406)
T ss_dssp CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEE
T ss_pred CHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEE
Confidence 9999999998888999999999999999999999999999999999999999999988743 233444444 456 8999
Q ss_pred ccCccccCCCCCcEEEEE--EeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHH
Q 019298 241 GSLSKRWIVPGWRLGWFV--TTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGS 317 (343)
Q Consensus 241 ~S~sK~~~~~G~r~G~i~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~ 317 (343)
+|+||.|+++|+|+||++ ++++. -.+++++++......++++++.+.++ .++|+...++++ .+++++++++.
T Consensus 241 ~s~sK~~~~~G~r~G~~~~~~~~~~----~~~l~~~l~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~ 315 (406)
T 1xi9_A 241 NGLSKVYFATGWRLGYMYFVDPENK----LSEVREAIDRLARIRLCPNTPAQFAA-IAGLTGPMDYLKEYMKKLKERRDY 315 (406)
T ss_dssp EESTTTTCCGGGCCEEEEEECTTCT----THHHHHHHHHHHHHTCCSCSHHHHHH-HHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred eccccccCCCccEEEEEEEecCchh----HHHHHHHHHHHHHhhcCCCHHHHHHH-HHHHhCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999998 53100 00577777765432266788888887 666643334444 78899999999
Q ss_pred HHHhhcCCCCceeeCCCCceEeeec
Q 019298 318 CVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 318 ~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
+.+.|+++||+.+..|++|+|+|++
T Consensus 316 l~~~L~~~~~~~~~~~~~~~~~~~~ 340 (406)
T 1xi9_A 316 IYKRLNEIPGISTTKPQGAFYIFPK 340 (406)
T ss_dssp HHHHHHTSTTEECCCCCBSSEECCE
T ss_pred HHHHHHhCCCCeeecCCeeEEEEEe
Confidence 9999999888987788899999975
No 23
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=3.3e-42 Score=316.15 Aligned_cols=293 Identities=19% Similarity=0.234 Sum_probs=247.1
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a 112 (343)
+.++|||+.|.++ ++.++.+.+++.+++.......|++..|..++|+++++++.+.+|..++++ +|++|+|++++
T Consensus 24 g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a 99 (376)
T 2dou_A 24 GVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEG 99 (376)
T ss_dssp TCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHH
T ss_pred CCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH
Confidence 6789999999853 567899999999998654456898766889999999999988778777777 99999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
+..+++++.++||+|+++.|+|..+...++..|.+++.+++ ++++.+|++++++.++++++++++++|+||||.+++.
T Consensus 100 ~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 177 (376)
T 2dou_A 100 LAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADW 177 (376)
T ss_dssp HHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCH
T ss_pred HHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCH
Confidence 99999999999999999999999999999999999999887 4667789999998887778999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
+++++|+++|++||+++|+||+|..+.+++.....+...+..+++++++|+||.|+++|+|+||++++ ++++
T Consensus 178 ~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~~~ 249 (376)
T 2dou_A 178 GYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS--------EEAL 249 (376)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC--------HHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC--------HHHH
Confidence 99999999999999999999999999876532222222233467899999999999999999999884 4788
Q ss_pred HHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++.... ...+++++.|.++ ..+|++...+++ .+++++++++.+.+.|+++ +.+..+++|+|+|+++
T Consensus 250 ~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~ 319 (376)
T 2dou_A 250 ARLERVKGVIDFNQYAGVLRMG-VEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRL 319 (376)
T ss_dssp HHHHHHHHHHCCCSCHHHHHHH-HHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEEC
T ss_pred HHHHHHHHhcccCCCHHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEEC
Confidence 88877644 2446788888887 666765345555 8889999999999999987 7776788999999864
No 24
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=8.5e-42 Score=318.85 Aligned_cols=318 Identities=23% Similarity=0.308 Sum_probs=262.9
Q ss_pred cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCC
Q 019298 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGL 79 (343)
Q Consensus 2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~ 79 (343)
++|+|.....++ .+..+.. ... +.++|+|+.|.++ +++++.+.+++.+++... ....|++..|.
T Consensus 14 ~~~~~~~~~~~~--~~~~~~~-~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~ 79 (429)
T 1yiz_A 14 DLPKRYQGSTKS--VWVEYIQ-LAA-------QYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGH 79 (429)
T ss_dssp CSSSSCCCCTTC--HHHHHHH-HHH-------HHCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCC
T ss_pred chhHHhhhCCch--HHHHHHH-Hhc-------cCCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCc
Confidence 456777766655 3333322 211 3468999999853 567899999999988652 24579887899
Q ss_pred HHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC-
Q 019298 80 PLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK- 157 (343)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~- 157 (343)
.++|+++++++.+.+|.+++++ +|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++++.++
T Consensus 80 ~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 159 (429)
T 1yiz_A 80 PRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKT 159 (429)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCS
T ss_pred HHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccc
Confidence 9999999999988778778889 99999999999999999999999999999999999999999999999999887643
Q ss_pred -------CCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc
Q 019298 158 -------GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV 230 (343)
Q Consensus 158 -------~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~ 230 (343)
++.+|+++|+++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++....++..
T Consensus 160 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 239 (429)
T 1yiz_A 160 GGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICT 239 (429)
T ss_dssp SSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGG
T ss_pred cccccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhh
Confidence 5679999999999888899999999999999999999999999999999999999999999887655445544
Q ss_pred cC-CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-----h--
Q 019298 231 FG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-----I-- 301 (343)
Q Consensus 231 ~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-----~-- 301 (343)
+. ..++++++.|+||.|+++|+|+||++++ +++++.++.... ..++.+++.|.++ ..+|.. .
T Consensus 240 ~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~ 310 (429)
T 1yiz_A 240 LPGMWERTITIGSAGKTFSLTGWKIGWAYGP--------EALLKNLQMVHQNCVYTCATPIQEAI-AVGFETELKRLKSP 310 (429)
T ss_dssp STTTGGGEEEEEEHHHHHTCGGGCCEEEESC--------HHHHHHHHHHHHTTTCCCCHHHHHHH-HHHHHHHHTTTTST
T ss_pred ccCCcCceEEEecchhccCCCCcceEEEEeC--------HHHHHHHHHHHhhcccCCChHHHHHH-HHHHhcccccccch
Confidence 43 3467899999999999999999999985 368888876643 3567788888877 666765 2
Q ss_pred HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 302 MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 302 ~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
..+++ .+++++++++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus 311 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~ 352 (429)
T 1yiz_A 311 ECYFNSISGELMAKRDYMASFLAEV-GMNPTVPQGGYFMVADW 352 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHH-TCEEEECSBSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEEc
Confidence 44554 8888999999999999888 78877888999999874
No 25
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=4e-42 Score=318.62 Aligned_cols=296 Identities=19% Similarity=0.231 Sum_probs=255.6
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAID 114 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~ 114 (343)
.+|||+.|++. ++++++.+++++.+++.......|++..|..++++++++++.+.+|..+++ ++|++|+|+++++.
T Consensus 40 ~~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~ 116 (407)
T 3nra_A 40 RPVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF 116 (407)
T ss_dssp CCEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred ceeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence 47999999865 367889999999998875444468888899999999999999888877766 79999999999999
Q ss_pred HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC----CCCCCCCHHHHHhhhcCCceEEEEeCCCCCccccc
Q 019298 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP----DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190 (343)
Q Consensus 115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~ 190 (343)
.++++++++||+|+++.|+|..+...++..|.+++.+++.. ++++.+|+++|+++++++++++++++|+||||.++
T Consensus 117 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~ 196 (407)
T 3nra_A 117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVY 196 (407)
T ss_dssp HHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCccc
Confidence 99999999999999999999999999999999999998843 35678999999999988899999999999999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC--CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG--STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~ 268 (343)
+.+++++|+++|++||+++|+||+|+.+.+++....++..+. ..+++++++|+||.|+++|+|+||++++
T Consensus 197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-------- 268 (407)
T 3nra_A 197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS-------- 268 (407)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC--------
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC--------
Confidence 999999999999999999999999999998876665555553 3568999999999999999999999984
Q ss_pred hHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 269 PKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 269 ~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++.++.... ...+++++.+.++ ..+|.+...+++ .+++++++++.+.+.|+++|++.+..+++|+|+|+++
T Consensus 269 ~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 344 (407)
T 3nra_A 269 RAIIARMEKLQAIVSLRAAGYSQAVL-RGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRL 344 (407)
T ss_dssp HHHHHHHHHHHHHHTSSSCHHHHGGG-GGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBC
T ss_pred HHHHHHHHHHHhhhccCCChHHHHHH-HHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeC
Confidence 478888877643 3456677888777 677765445555 8888999999999999999899987899999999874
No 26
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=3.3e-42 Score=318.29 Aligned_cols=323 Identities=16% Similarity=0.137 Sum_probs=256.2
Q ss_pred ccccCcCccccHHHHHHHHHhhccccccccceeEeccCC---CCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCCHH
Q 019298 6 GGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGD---PTVHSCFHTTHVATEAVAE-ALLSEKFNGYAPTAGLPL 81 (343)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~~~g~~~ 81 (343)
+....+++ ++..+...+.++. ..++|||+.|. +. ...+.++.+.+++.+ ++.......|++..|.++
T Consensus 4 ~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~ 74 (397)
T 3fsl_A 4 KVDAYAGD--PILTLMERFKEDP-----RSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNC 74 (397)
T ss_dssp TCCCCCCC--HHHHHHHHHHTCC-----CSCCEECSSCCCCCTT--SCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHH
T ss_pred cCCCCCCC--chhhHHHHHhcCC-----CCCeEEEeeeEEECCC--CCccCcHHHHHHHHhhccCccccccCCCCCchHH
Confidence 45566666 7888887777665 56799999994 33 234566999999999 887655678999899999
Q ss_pred HHHHHHHHHhhhCCCCCCCC--cEEEecChHHHHHHHHH--HhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298 82 TRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMA--LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157 (343)
Q Consensus 82 lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~al~~~~~--~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 157 (343)
+|+++++++.+..+..++++ +|++|+|+++++..+++ .++++||+|+++.|+|..+...++..|.+++.+++..++
T Consensus 75 lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 154 (397)
T 3fsl_A 75 YRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEA 154 (397)
T ss_dssp HHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETT
T ss_pred HHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeecc
Confidence 99999999976544444788 99999999999999954 457899999999999999999999999999999885556
Q ss_pred CCCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCccccc-C
Q 019298 158 GWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVF-G 232 (343)
Q Consensus 158 ~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~~~~~-~ 232 (343)
++.+|++++++.++ ++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+ .
T Consensus 155 ~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 234 (397)
T 3fsl_A 155 TNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIAS 234 (397)
T ss_dssp TTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHH
T ss_pred CCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHh
Confidence 78899999999987 4677888899999999999999999999999999999999999999988732 22233333 3
Q ss_pred CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh----h-hccccCcchHHHHHHHhccchhh------
Q 019298 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK----Y-FDILGDPATFIQVCIMYGCLSTI------ 301 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~----~-~~~~~~~~~~~~~a~~~~~l~~~------ 301 (343)
..+++++++|+||.|+++|+|+||++++.. ++++++++.. . ...+..++.++|.++ ..++.+.
T Consensus 235 ~~~~~i~~~S~SK~~~~~G~riG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~l~~~~ 308 (397)
T 3fsl_A 235 AGLPALVSNSFSKIFSLYGERVGGLSVMCE-----DAEAAGRVLGQLKATVRRNYSSPPNFGAQVV-AAVLNDEALKASW 308 (397)
T ss_dssp TTCCEEEEEECTTTTTCGGGCCEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHH-HHHHTSHHHHHHH
T ss_pred cCCCEEEEecccccccCcCCCeeEEEEecC-----CHHHHHHHHHHHHHHHHhccCCCCHHHHHHH-HHHhcCHHHHHHH
Confidence 456899999999999999999999986421 2345544322 2 122445677888777 5555542
Q ss_pred HHHHH-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298 302 MQIMI-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 302 ~~~l~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l 343 (343)
.++++ .+++++++++.+.+.|++++ |+.+..|++|+|+|+++
T Consensus 309 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 3fsl_A 309 LKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGL 354 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCC
Confidence 23343 88899999999999998864 68877889999999874
No 27
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=323.43 Aligned_cols=300 Identities=20% Similarity=0.340 Sum_probs=238.6
Q ss_pred ceeEeccCCCCCCCCCCC----------------------cHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHH
Q 019298 36 KVISLAMGDPTVHSCFHT----------------------THVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYL 90 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~----------------------~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~ 90 (343)
++|++++|+|.... ..+ +..+.+++++++... ....|+++.|.+++|+++++++
T Consensus 64 ~~i~~nig~p~~~~-~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~ 142 (498)
T 3ihj_A 64 EVIRANIGDAQAMG-QQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYI 142 (498)
T ss_dssp SCBCCC-----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHH
T ss_pred hhhhcCCcCccccc-CCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 88999999975321 111 344445556666542 3568999999999999999999
Q ss_pred hhhC-CCCCCCCcEEEecChHHHHHHHHHHhcCCCC----eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHH
Q 019298 91 SRDL-PYKLTPNDVFVTSGCTQAIDVAMALLSRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDD 165 (343)
Q Consensus 91 ~~~~-~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 165 (343)
.+++ |.++++++|++|+|+++++..++++++++|| +|+++.|+|+.|...+...|.+++.++++++++|.+|+++
T Consensus 143 ~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~ 222 (498)
T 3ihj_A 143 TRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNE 222 (498)
T ss_dssp HHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHH
T ss_pred HHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHH
Confidence 9888 4888999999999999999999999998875 9999999999999999999999999999888889999999
Q ss_pred HHhhhcC-----CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCcccccC-------
Q 019298 166 IESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFG------- 232 (343)
Q Consensus 166 l~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~~~~~~------- 232 (343)
|++++++ +++++++++||||||.+++.+++++|+++|++||+++|+||+|+.+.+++. ...++..+.
T Consensus 223 le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~ 302 (498)
T 3ihj_A 223 LRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEY 302 (498)
T ss_dssp HHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHH
T ss_pred HHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccc
Confidence 9999876 588999999999999999999999999999999999999999999999754 444444321
Q ss_pred -CCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-------hHH
Q 019298 233 -STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-------IMQ 303 (343)
Q Consensus 233 -~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-------~~~ 303 (343)
...++|+++||||+| |++|+|+||+++... ++++++.+........+++.+.|.++ ..++.. ...
T Consensus 303 ~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~-----~~~l~~~l~~~~~~~~~~~~~~q~a~-~~~l~~~~~g~~~~~~ 376 (498)
T 3ihj_A 303 SSNVELASFHSTSKGYMGECGYRGGYMEVINL-----HPEIKGQLVKLLSVRLCPPVSGQAAM-DIVVNPPVAGEESFEQ 376 (498)
T ss_dssp HTTCCEEEEEESSSSTTCCSSSCCEEEEEESC-----CHHHHHHHHHHHHHSCCCCHHHHHHH-HHHTCCCCTTSTTHHH
T ss_pred cCceeEEEEeccccccccCcccceEEEEEecC-----CHHHHHHHHHHHhccCCCCHHHHHHH-HHHhcCCccCcccHHH
Confidence 234689999999999 789999999985221 25788888877665678888999888 666642 123
Q ss_pred HHH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 304 IMI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 304 ~l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
+++ .+++++++++.+.+.|+++||+.+..|++|+|+|++
T Consensus 377 ~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~ 419 (498)
T 3ihj_A 377 FSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPR 419 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEe
Confidence 432 778899999999999999999998899999999974
No 28
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=5.9e-42 Score=318.41 Aligned_cols=329 Identities=16% Similarity=0.136 Sum_probs=260.4
Q ss_pred cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPT-VHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
.+|++.....++ +++.+.....+.... .++.++|+|++|+|. ..+.+++++.+.+++.+.... ....|++..|.+
T Consensus 7 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y~~~~g~~ 82 (413)
T 3t18_A 7 TIKRATWNNGPD--LAFDINNKANAAIEK-YGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASYAPIEGEK 82 (413)
T ss_dssp SCTTTCCCCCCC--HHHHHHHHHHHHHHH-HCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSCCCTTCCH
T ss_pred hhhhcccCCCCC--hHHHHHHHHhhhhhh-ccccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCcCCCCCCH
Confidence 457888888888 788888776655421 235689999999963 223477888999888764322 235798888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
++|+++++++.+..+.. ++++|++|+|+++++..+++.++++||+|++++|+|..+...++..|.+++.+++..++ +.
T Consensus 83 ~lr~~la~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~ 160 (413)
T 3t18_A 83 DYRKIVIDTLFGPYKPE-GYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDD-FA 160 (413)
T ss_dssp HHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTT-SS
T ss_pred HHHHHHHHHHhcccCcc-ccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCC-CC
Confidence 99999999996644321 44599999999999999999999999999999999999999999999999999885443 78
Q ss_pred CCHHHHHhhhcC----Cce-EEEEeCC-CCCcccccCHHHHHHHHHHHh------hcCcEEEEccCCCccccCCCCCCcc
Q 019298 161 VDLDDIESLADQ----NTV-ALVIINP-GNPCGNVYSYQHLQKLAETAN------KLKTLVIADEVYGHLVFGDKPFVPM 228 (343)
Q Consensus 161 ~d~~~l~~~~~~----~~~-~i~~~~p-~nptG~~~~~~~l~~l~~~~~------~~~~~~i~D~ay~~~~~~~~~~~~~ 228 (343)
+|+++|++++++ +++ ++++++| |||||.+++.+++++|+++|+ +||+++|+||+|.++.+++....++
T Consensus 161 ~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 240 (413)
T 3t18_A 161 FNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKF 240 (413)
T ss_dssp BCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGG
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHH
Confidence 999999998875 566 7788899 999999999999999999999 8999999999999999877544333
Q ss_pred c-ccCC-CCC--EEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-----ccCcchHHHHHHHhccch
Q 019298 229 G-VFGS-TVP--ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-----LGDPATFIQVCIMYGCLS 299 (343)
Q Consensus 229 ~-~~~~-~~~--~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~a~~~~~l~ 299 (343)
. .... .++ +++++||||+|+++|+|+||++++.. ++++++.++..... +..++.++|.++ ..+|.
T Consensus 241 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~ 314 (413)
T 3t18_A 241 FEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISS-----SKEIIEEFEASLAHSARCNWSNGTHAAQNIL-IELER 314 (413)
T ss_dssp GGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEES-----CHHHHHHHHHHHHHHHHHHTSSCCHHHHHHH-HHTTS
T ss_pred HHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecC-----CHHHHHHHHHHHHHhhhccccCCChHHHHHH-HHHhc
Confidence 2 2222 234 58999999999999999999998310 14688887765321 245788888888 67776
Q ss_pred hhH--HHHH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 300 TIM--QIMI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 300 ~~~--~~l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.. +|.+ .+++++++++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~ 363 (413)
T 3t18_A 315 AENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMIPYFGGFFTFIPT 363 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSSSCEEEEC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCccCCCceEEEEeCC
Confidence 532 1332 6788999999999999988 88888999999999863
No 29
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=5.2e-42 Score=314.70 Aligned_cols=291 Identities=20% Similarity=0.309 Sum_probs=253.4
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
++++|||+.|++ .+++++.+.+++.+++... ...|++ .+ .++|+++++++.+.+|..+++++|++|+|+++++
T Consensus 22 g~~~idl~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~ 94 (377)
T 3fdb_A 22 GQGVLPLWVAES----DFSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGL 94 (377)
T ss_dssp CTTSEECCSSCC----CSCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCeeeecccCC----CCCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHH
Confidence 788999999984 4778999999999998764 457988 77 8999999999998888888999999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++++++++||+|+++.|+|..+...++..|.+++.++++.+ +|++++++.++++++++++++|+||||.+++.+
T Consensus 95 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~ 170 (377)
T 3fdb_A 95 YIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAPE 170 (377)
T ss_dssp HHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHH
T ss_pred HHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999999988653 899999999988899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCC-CCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~-~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
++++|+++|++||+++|+||+|..+.+++ ....++..+...+++++++|+||.||++|+|+||+++++ ++++
T Consensus 171 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~~~~ 243 (377)
T 3fdb_A 171 WLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN-------PSDA 243 (377)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS-------HHHH
T ss_pred HHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC-------HHHH
Confidence 99999999999999999999999998877 544455444445678999999999999999999988753 4688
Q ss_pred HHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l 343 (343)
+.++.... ..++++++.+.++ .++|.+..++++ .+++++++++.+.+.|++ +||+.+..+++++++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 316 (377)
T 3fdb_A 244 EHWQQLSPVIKDGASTLGLIAA-EAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDF 316 (377)
T ss_dssp HHHHHSCHHHHCCCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEEC
T ss_pred HHHHHHHHhhcCCCCHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEEC
Confidence 88877643 2467888888887 666665455555 889999999999999988 8899988999999999864
No 30
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=1.6e-42 Score=323.48 Aligned_cols=317 Identities=21% Similarity=0.245 Sum_probs=251.6
Q ss_pred cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHH---------HHHHhcCCCCC
Q 019298 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAV---------AEALLSEKFNG 72 (343)
Q Consensus 2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 72 (343)
.+|+|....+++ +++.+.....+. ++++|+|+.|.|+... ++ ...+..++ ..... ...+
T Consensus 6 ~~s~~~~~~~~~--~~~~~~~~~~~~------~~~~i~l~~G~p~~~~-~p-~~~~~~~~~~~~~~~~~~~~~~--~~~~ 73 (425)
T 2r2n_A 6 FITAASAARNPS--PIRTMTDILSRG------PKSMISLAGGLPNPNM-FP-FKTAVITVENGKTIQFGEEMMK--RALQ 73 (425)
T ss_dssp GSCHHHHTCCCC--SGGGHHHHHHHS------CTTCEECCCCCCCGGG-CS-EEEEEEEETTSCCEEECHHHHH--HHTS
T ss_pred HHHHHHhcCCCc--hHHHHHHHhhcC------CCCeEEcCCcCCCchh-CC-HHHHHHHHhhcccccccccchh--hhcC
Confidence 378888888888 677766654321 3568999999987321 22 11110000 01111 1237
Q ss_pred CCCCCCCHHHHHHHHHHHhhhCCCCCC-------CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcC
Q 019298 73 YAPTAGLPLTRRAIAEYLSRDLPYKLT-------PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRH 145 (343)
Q Consensus 73 Y~~~~g~~~lr~~ia~~~~~~~~~~~~-------~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g 145 (343)
|++..|.+++|+++++++.+.+|...+ +++|++|+|+++++..++++++++||+|++++|+|..+...++..|
T Consensus 74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g 153 (425)
T 2r2n_A 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLG 153 (425)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGT
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcC
Confidence 999999999999999999887887664 3799999999999999999999999999999999999999999999
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhc------------CCceEEEE-eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLAD------------QNTVALVI-INPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~------------~~~~~i~~-~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
.+++.++++. .++|+++|++.++ .+++++++ ++||||||.+++.+++++|+++|++||+++|+|
T Consensus 154 ~~~~~v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~D 230 (425)
T 2r2n_A 154 CNIINVASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIED 230 (425)
T ss_dssp CEEEEECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 9999998753 2589999999886 35677765 688999999999999999999999999999999
Q ss_pred cCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHH
Q 019298 213 EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQV 291 (343)
Q Consensus 213 ~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 291 (343)
|+|.++.+++....++..++..+++++++||||+|+ +|+|+||++++ ++++++++.... ..++++++.|.
T Consensus 231 e~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~ 301 (425)
T 2r2n_A 231 DPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGP--------KPLIERVILHIQVSTLHPSTFNQL 301 (425)
T ss_dssp CTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEE--------HHHHHHHHHHHHTTTCSSCHHHHH
T ss_pred CCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecC--------HHHHHHHHHHHHHhcCCCCHHHHH
Confidence 999999887765556666666678999999999998 99999999996 368888877653 35678899998
Q ss_pred HHHhccchhh-----HHHHH-HHHHHHHHHHHHHHhhcC-CCCce-eeCCCCceEeeecC
Q 019298 292 CIMYGCLSTI-----MQIMI-HGNFLENFAGSCVPSYKL-IPELI-NFKSTGSSLKYLDL 343 (343)
Q Consensus 292 a~~~~~l~~~-----~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~-~~~~~~g~~~~~~l 343 (343)
++ ..+|+.. .++++ .+++++++++.+.+.|++ +||+. +..|++|+|+|+++
T Consensus 302 a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~ 360 (425)
T 2r2n_A 302 MI-SQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKV 360 (425)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEE
T ss_pred HH-HHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEe
Confidence 88 6666641 23443 788899999999999987 67874 66899999999864
No 31
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=7.4e-41 Score=306.49 Aligned_cols=308 Identities=19% Similarity=0.326 Sum_probs=259.1
Q ss_pred ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (343)
Q Consensus 3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l 82 (343)
+|+|....+++ +++.+.....+... .+++.|+|+.|.++ ++.++.+.+++.+++... ...|++..|..++
T Consensus 2 ~~~~~~~~~~~--~~~~~~~~~~~~~~---~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l 71 (370)
T 2z61_A 2 LSKRLLNFESF--EVMDILALAQKLES---EGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILEL 71 (370)
T ss_dssp CCHHHHHCCCC--TTHHHHHHHHHHHH---TTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHH
T ss_pred hhhhhhhcccc--HHHHHHHHHHHHHh---cCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHH
Confidence 57778888877 67777766654432 26788999999954 556899999999988754 4579888899999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (343)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 162 (343)
|+++++++.+.+|..+++++|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.++ +|
T Consensus 72 ~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d 143 (370)
T 2z61_A 72 REKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FT 143 (370)
T ss_dssp HHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SS
T ss_pred HHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CC
Confidence 9999999998888888999999999999999999999999999999999999999999999999988875 68
Q ss_pred HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEc
Q 019298 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLG 241 (343)
Q Consensus 163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~ 241 (343)
+++|++.++++++++++++|+||||.+++.+ |+++|++||+++|+||+|..+.+++. +.++..+. ..+++++++
T Consensus 144 ~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~ 218 (370)
T 2z61_A 144 VESLEEALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILIN 218 (370)
T ss_dssp HHHHHHHCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEE
T ss_pred HHHHHHhcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEe
Confidence 9999999988889999999999999999987 88999999999999999999887653 23344442 346799999
Q ss_pred cCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHH
Q 019298 242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSC 318 (343)
Q Consensus 242 S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~ 318 (343)
|+||.|+++|+|+||++++ ++++++++.... ..++++++.|.++ .++|+. ..++++ .+++++++++.+
T Consensus 219 s~sK~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~l 289 (370)
T 2z61_A 219 GFSKLYAMTGWRIGYVISN--------DEIIEAILKLQQNLFISAPTISQYAA-LKAFEKETEREINSMIKEFDRRRRLV 289 (370)
T ss_dssp ESTTTTTCGGGCCEEEECC--------HHHHHHHHHHHHHHTSSSCHHHHHHH-GGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChhccCCccceEEEEEEC--------HHHHHHHHHHHhhcccCCCHHHHHHH-HHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999985 368888877653 2457888889888 777775 455555 888999999999
Q ss_pred HHhhcCCCCceeeCCCCceEeeecC
Q 019298 319 VPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 319 ~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
.+.|+++ |+.+..+++|+|+|+++
T Consensus 290 ~~~L~~~-g~~~~~~~~~~~~~~~~ 313 (370)
T 2z61_A 290 LKYVKDF-GWEVNNPIGAYYVFPNI 313 (370)
T ss_dssp HHHHHHT-TCBCCCCCBTTEECCBC
T ss_pred HHHHHHc-CCeecCCCcceEEEEec
Confidence 9999988 88877889999999864
No 32
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=3.8e-41 Score=314.41 Aligned_cols=326 Identities=18% Similarity=0.282 Sum_probs=253.3
Q ss_pred ccCccccCcCc-cccHHHHH-HHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc----------CCC
Q 019298 3 ISNGGIDNTGS-IITIKGML-SLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----------EKF 70 (343)
Q Consensus 3 ~s~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 70 (343)
+|+|+...... ..++..-+ .......+...++.+.|+|+.+. +.++ ++.+.++++++... ...
T Consensus 2 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~----~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~ 76 (428)
T 1iay_A 2 LSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAE----NQLC-LDLIEDWIKRNPKGSICSEGIKSFKAI 76 (428)
T ss_dssp CCTTGGGC-----CCTTHHHHHHHHSBCCSSSSTTSBEECSSCC----CCSS-HHHHHHHHHHCTTSSTTC----CHHHH
T ss_pred cccccccccCcccccccchhhhhccCCCCcccCCCceeeecccc----chhh-HHHHHHHHHhccccccccccccccHhh
Confidence 68888665532 22333333 33333344334456789999887 2243 45788887754210 123
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCC--CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH-HhcCce
Q 019298 71 NGYAPTAGLPLTRRAIAEYLSRDLPYK--LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA-AFRHIE 147 (343)
Q Consensus 71 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~--~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~-~~~g~~ 147 (343)
..|+++.|..++|+++++++++.+|.. +++++|++++|+++++..++++++++||+|++++|+|..+...+ ...|.+
T Consensus 77 ~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~ 156 (428)
T 1iay_A 77 ANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQ 156 (428)
T ss_dssp HHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCE
T ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCE
Confidence 579888889999999999999877765 77899999999999999999999999999999999999987754 367999
Q ss_pred eEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC
Q 019298 148 VRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221 (343)
Q Consensus 148 ~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~ 221 (343)
++.++++.++++.+|++++++++++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.++
T Consensus 157 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~ 236 (428)
T 1iay_A 157 LIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFD 236 (428)
T ss_dssp EEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCS
T ss_pred EEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccC
Confidence 9999886656778999999998863 6788999999999999999999999999999999999999999998876
Q ss_pred CCCCCcccccCC--------CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHH
Q 019298 222 DKPFVPMGVFGS--------TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293 (343)
Q Consensus 222 ~~~~~~~~~~~~--------~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~ 293 (343)
+....++..+.. .++++++.|+||.||++|+|+||+++++ +++++.++.... .+.+++++|.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~a~ 308 (428)
T 1iay_A 237 TPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFN-------DDVVNCARKMSS-FGLVSTQTQYFL 308 (428)
T ss_dssp SSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESC-------HHHHHHHHHHHT-TSCCCHHHHHHH
T ss_pred CCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCC-------HHHHHHHHHHHh-cccCCHHHHHHH
Confidence 654434333322 4689999999999999999999999853 468887776554 356788888888
Q ss_pred HhccchhhH---HHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 294 MYGCLSTIM---QIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 294 ~~~~l~~~~---~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
..+|.+.. ++++ .+++++++++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus 309 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~ 360 (428)
T 1iay_A 309 -AAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNAGLFCWMDL 360 (428)
T ss_dssp -HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSSEEEEEC
T ss_pred -HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEec
Confidence 77777532 2444 8888999999999999988 88876777999999874
No 33
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=3.1e-41 Score=310.11 Aligned_cols=295 Identities=16% Similarity=0.280 Sum_probs=254.3
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
++++|+|+.|++ .+++++.+.+++.+++... ...|++. ..++++++++++.+.+|..+++++|++|+|+++++
T Consensus 23 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~ 95 (383)
T 3kax_A 23 NEELIHAWIADM----DFEVPQPIQTALKKRIEHP-IFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPAL 95 (383)
T ss_dssp SSCCEECCCSSC----SSCCCHHHHHHHHHHHHSC-CCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCeeecccccC----CCCCCHHHHHHHHHHHhcC-CCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHH
Confidence 578999999984 4788999999999998764 3477764 67999999999998888888899999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC-CCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
..++++++++||+|+++.|+|..+...++..|.+++.+++++++ +|.+|+++|+++++++++++++++|+||||.+++.
T Consensus 96 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~ 175 (383)
T 3kax_A 96 STSIQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKK 175 (383)
T ss_dssp HHHHHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCH
T ss_pred HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCH
Confidence 99999999999999999999999999999999999999886433 46799999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 270 (343)
+++++|+++|++||+++|+||+|..+.+++....++..+.. .+++++++|+||.|+++|+|+||+++++ ++
T Consensus 176 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~~ 248 (383)
T 3kax_A 176 EELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPN-------EK 248 (383)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------HH
T ss_pred HHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCC-------HH
Confidence 99999999999999999999999999988765555555543 3689999999999999999999999853 46
Q ss_pred HHHHHhhhhcc--ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298 271 VVERMKKYFDI--LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 271 ~~~~l~~~~~~--~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l 343 (343)
+++.++..... .++++++.+.++ .+++.+..++++ .+++++++++.+.+.|++ +||+.+..+++++++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 324 (383)
T 3kax_A 249 LRQAFTSIQYRQGFHGLNIFAYTAM-QSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDC 324 (383)
T ss_dssp HHHHHHHHHHHTTCCCCCHHHHHHH-HHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEEC
T ss_pred HHHHHHHHHhhcccCCCCHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEc
Confidence 88888766432 347788888888 666665455665 888999999999999987 7899988999999999864
No 34
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=1.8e-41 Score=318.30 Aligned_cols=329 Identities=16% Similarity=0.160 Sum_probs=256.2
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCC-CCCCCCCCcHHHHHHHHHHH--hcCCCCCCCCCC
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEAL--LSEKFNGYAPTA 77 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~~~ 77 (343)
|.++++....+++ ++..+...+.++. .+.+|||++|.+ +.....+..+++.+++.+.. ......+|.+..
T Consensus 22 ~~~~~~~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~ 94 (448)
T 3meb_A 22 MSVFSGFPASPPD--AILNLTVLYNADT-----NPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVA 94 (448)
T ss_dssp CCTTTTCCCCCCC--TTHHHHHHHHHCC-----CTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTT
T ss_pred hhHHhcCCCCCCC--hHHHHHHHHHhCC-----CCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCc
Confidence 4556667777776 7888888777765 556899999998 43333457788888877765 223456899989
Q ss_pred CCHHHHHHHHHHHhhhCCCC---CCCCcEEE--ecChHHHHHH--HHHHhcCCCCeEEEeCCCCcchHHHHH----hcCc
Q 019298 78 GLPLTRRAIAEYLSRDLPYK---LTPNDVFV--TSGCTQAIDV--AMALLSRPGANILLPRPGFPIYELSAA----FRHI 146 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~---~~~~~i~~--~~g~~~al~~--~~~~l~~~gd~vl~~~p~~~~~~~~~~----~~g~ 146 (343)
|.+++|+++++++. |.. +++++|++ |+|+++++.. .+..++.+||+|++++|+|..+...++ ..|.
T Consensus 95 G~~~lr~~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~ 171 (448)
T 3meb_A 95 GFPLFLEAAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKV 171 (448)
T ss_dssp CCHHHHHHHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTS
T ss_pred chHHHHHHHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCC
Confidence 99999999999993 322 23689999 9999999988 445667899999999999999999999 9999
Q ss_pred eeEEeecCCCC-CCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC
Q 019298 147 EVRHFDLLPDK-GWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD 222 (343)
Q Consensus 147 ~~~~~~~~~~~-~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~ 222 (343)
+++.+++..++ ++.+|++++++.+++ ++.++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++
T Consensus 172 ~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~ 251 (448)
T 3meb_A 172 PYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGS 251 (448)
T ss_dssp CCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSC
T ss_pred eEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCC
Confidence 99999885444 688999999998874 56777889999999999999999999999999999999999999998775
Q ss_pred C--CCCccccc-CCCCCEEEEccCccccCCCCCcEEEE--EE--------eCCCCCCCchHHHHHHhhhh-ccccCcchH
Q 019298 223 K--PFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWF--VT--------TDPCGMFRKPKVVERMKKYF-DILGDPATF 288 (343)
Q Consensus 223 ~--~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~i--~~--------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~ 288 (343)
. ....+..+ ....++++++||||+|+++|+|+||+ ++ +++.. -.++++.++... ..+.+++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~---~~~l~~~l~~~~~~~~~~~~~~ 328 (448)
T 3meb_A 252 FEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKAL---SAAMVSGMTLQIRKTWSMSAIH 328 (448)
T ss_dssp HHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHH---HHHHHHHHHHHHHTTTSSCCHH
T ss_pred cccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHH---HHHHHHHHHHHHhcccCCccHH
Confidence 2 12222222 23468899999999999999999998 65 42100 004666666543 335577888
Q ss_pred HHHHHHhccchhhH---HH---HH-HHHHHHHHHHHHHHhhcCC--CC------ceeeCCCCceEeeecC
Q 019298 289 IQVCIMYGCLSTIM---QI---MI-HGNFLENFAGSCVPSYKLI--PE------LINFKSTGSSLKYLDL 343 (343)
Q Consensus 289 ~~~a~~~~~l~~~~---~~---l~-~~~~~~~~~~~~~~~L~~~--~g------~~~~~~~~g~~~~~~l 343 (343)
.|.++ ..+|.+.. +| ++ .+++++++++.+.+.|+++ ++ +.+..|++|+|+|+++
T Consensus 329 ~~~a~-~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (448)
T 3meb_A 329 GAYIV-QVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGL 397 (448)
T ss_dssp HHHHH-HHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCC
T ss_pred HHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCC
Confidence 88888 66666532 33 33 8889999999999999876 66 7766899999999864
No 35
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=9.4e-42 Score=315.26 Aligned_cols=332 Identities=13% Similarity=0.037 Sum_probs=244.6
Q ss_pred CcccCccccCcCc-cccHHHHHHHHHhhccccccccceeEeccCCCCCC-CCCCCcHHHHHHHHHHHhcCCCCCCCCCCC
Q 019298 1 MEISNGGIDNTGS-IITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVH-SCFHTTHVATEAVAEALLSEKFNGYAPTAG 78 (343)
Q Consensus 1 ~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g 78 (343)
|+.++|.++++.. ..+|..+...++++. .++|||++|..... ...+..+.+++|.+..++.+..++|.|..|
T Consensus 15 m~~~~~~~~v~~~p~d~i~~l~~~~~~d~------~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G 88 (420)
T 4h51_A 15 MTTAERWQKIQAQAPDVIFDLAKRAAAAK------GPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISG 88 (420)
T ss_dssp CCHHHHHHTCCCCCCCHHHHHHHHHHHCC------SSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTC
T ss_pred hhhhHHHhCCCCCCCChHHHHHHHHhcCC------CCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCC
Confidence 4555665554433 237888888777664 34899999964322 234567899999888887776778999999
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCc--EEEecChHHHHHHHHHHh----cCCCCeEEEeCCCCcchHHHHHhcCce-eEEe
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALL----SRPGANILLPRPGFPIYELSAAFRHIE-VRHF 151 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~--i~~~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~~~~~~~~~g~~-~~~~ 151 (343)
.++||+++++++.+ .....+. .+.|.|++.++..++..+ ..|||+|++++|+|++|...++..|.+ +..+
T Consensus 89 ~p~lr~aia~~~~g---~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~ 165 (420)
T 4h51_A 89 YQPFIDEAVKIIYG---NTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTY 165 (420)
T ss_dssp CHHHHHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEE
T ss_pred hHHHHHHHHHHhcC---CCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEee
Confidence 99999999999843 2333343 355889998888777665 469999999999999999999999987 4455
Q ss_pred ecCCCCCCCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-
Q 019298 152 DLLPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP- 227 (343)
Q Consensus 152 ~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~- 227 (343)
+....+++.+|.+.+.+.+. ++++++++++||||||.+++.++|++|+++|+++++++|+|++|.+|.+++....+
T Consensus 166 ~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~ 245 (420)
T 4h51_A 166 AYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAY 245 (420)
T ss_dssp ECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTH
T ss_pred ccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchH
Confidence 55555667789888887664 45667778889999999999999999999999999999999999999987643222
Q ss_pred -cc-ccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhh---
Q 019298 228 -MG-VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTI--- 301 (343)
Q Consensus 228 -~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~--- 301 (343)
.. ..+...+++++.||||+|+++|+|+||++++...... -..+..++... +...++++...|.++ ..+|.++
T Consensus 246 ~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~~~r~~~s~~p~~~a~~~-~~~l~d~~l~ 323 (420)
T 4h51_A 246 AARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDSLIREEYTCPPAHGARLA-HLILSNNELR 323 (420)
T ss_dssp HHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHHHHHTTTSSCCHHHHHHH-HHHHHSHHHH
T ss_pred HHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHHhhhcccCcchHHHHHHH-HHHhcCHHHH
Confidence 11 1234457899999999999999999999886532000 00122223323 234567788888887 6666653
Q ss_pred HHHHH----HHHHHHHHHHHHHHhhcCC--CC-ceeeCCCCceEeeecC
Q 019298 302 MQIMI----HGNFLENFAGSCVPSYKLI--PE-LINFKSTGSSLKYLDL 343 (343)
Q Consensus 302 ~~~l~----~~~~~~~~~~~~~~~L~~~--~g-~~~~~~~~g~~~~~~l 343 (343)
.+|.+ ++++++++|+.+.+.|+++ ++ |.+..+++|+|.|+.|
T Consensus 324 ~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gl 372 (420)
T 4h51_A 324 KEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGL 372 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCc
Confidence 23333 8889999999999999875 22 5555789999999864
No 36
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=3.6e-41 Score=311.57 Aligned_cols=294 Identities=17% Similarity=0.279 Sum_probs=248.4
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
.++++|+.|++ .+++++.+.+++.+++... ...|++. ..++|+++++++.+.+|.++++++|++|+|+++++.
T Consensus 31 ~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~ 103 (399)
T 1c7n_A 31 NEVVPLSVADM----EFKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF 103 (399)
T ss_dssp TTCCCCCSSSC----SSCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred CCceeeeecCC----CCCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence 57899999984 3678899999999988643 4578764 899999999999887787788899999999999999
Q ss_pred HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC-CCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCH
Q 019298 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~ 192 (343)
.++++++++||+|+++.|+|.++...+...|.+++.+++++++ ++.+|+++|+++++ ++++++++++|+||||.+++.
T Consensus 104 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 183 (399)
T 1c7n_A 104 NAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK 183 (399)
T ss_dssp HHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH
T ss_pred HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH
Confidence 9999999999999999999999999999999999988875332 46699999999997 678899999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 270 (343)
+++++|+++|++||+++|+||+|..+.+++....++..+.. .+++++++|+||.|+++|+|+||+++++ ++
T Consensus 184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~~ 256 (399)
T 1c7n_A 184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN-------PD 256 (399)
T ss_dssp HHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------HH
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC-------HH
Confidence 99999999999999999999999999887655445554443 4678999999999999999999999853 35
Q ss_pred HHHHHhhhhccc--cCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298 271 VVERMKKYFDIL--GDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 271 ~~~~l~~~~~~~--~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l 343 (343)
++++++...... .+++++.+.++ .++|....++++ .+++++++++.+.+.|++ +||+.+..+++++++|+++
T Consensus 257 ~~~~l~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 332 (399)
T 1c7n_A 257 IRERFTKSRDATSGMPFTTLGYKAC-EICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDF 332 (399)
T ss_dssp HHHHHHHHHHHTTCCCCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEEC
T ss_pred HHHHHHHHHhhcccCCCCHHHHHHH-HHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEc
Confidence 888887664322 35788888877 666654345555 888899999999999998 8899887889999999864
No 37
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=7.7e-41 Score=308.29 Aligned_cols=295 Identities=20% Similarity=0.273 Sum_probs=253.4
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
++++|||+.|++ .+++++.+.+++.+++... ...|++. ..++++++++++.+.+|.++++++|++|+|+++++
T Consensus 26 g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~ 98 (391)
T 3dzz_A 26 KEKELPMWIAEM----DFKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAI 98 (391)
T ss_dssp CTTCEECCSSCC----SSCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHH
T ss_pred CCCceeccccCC----CCCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHH
Confidence 668999999984 4788999999999998764 3467764 68999999999999888888999999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC-CCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccC
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~ 191 (343)
..++++++++||+|+++.|+|..+...++..|.+++.++++ .++.+.+|+++|+++++ ++++++++++|+||||.+++
T Consensus 99 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~ 178 (391)
T 3dzz_A 99 SAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWS 178 (391)
T ss_dssp HHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccC
Confidence 99999999999999999999999999999999999999885 34556799999999997 68899999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~ 269 (343)
.+++++|+++|++||+++|+||+|..+.+.+....++..+.. .++++++.|+||.++++|+|+||+++++ +
T Consensus 179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~-------~ 251 (391)
T 3dzz_A 179 EEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN-------P 251 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS-------H
T ss_pred HHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC-------H
Confidence 999999999999999999999999999888765555555543 3579999999999999999999999863 4
Q ss_pred HHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298 270 KVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 270 ~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l 343 (343)
++++.++.... ..++++++.+.++ .+++....++++ .+++++++++.+.+.|++ +||+.+..+++++++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (391)
T 3dzz_A 252 DLRARAEESFFLAGIGEPNLLAIPAA-IAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDI 328 (391)
T ss_dssp HHHHHHHHHHHHHTCSSCCTTHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEEC
T ss_pred HHHHHHHHHHHhhccCCCCHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEeh
Confidence 68888876642 2456777888777 556655455555 888899999999999998 8999988999999999864
No 38
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=2e-41 Score=314.73 Aligned_cols=329 Identities=13% Similarity=0.113 Sum_probs=259.0
Q ss_pred cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCC-CCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCC
Q 019298 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLS-EKFNGYAPTAGL 79 (343)
Q Consensus 2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~ 79 (343)
.+++|..+.+++ +++.+.....+.. +.++|||+.|.+ +......+++.+.+++.+++.+ ...+.|.+..|.
T Consensus 4 ~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~ 76 (412)
T 1ajs_A 4 SVFAEVPQAQPV--LVFKLIADFREDP-----DPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGL 76 (412)
T ss_dssp CTTTTCCCCCCC--HHHHHHHHHHTCC-----CTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCC
T ss_pred chhhhCcccCCc--hHHHHHHHHhhcC-----CCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCC
Confidence 356677788877 7888888776542 678899999996 3222245779999999998733 245689888899
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEE--ecChHHHHHHHHH--HhcCCC-----CeEEEeCCCCcchHHHHHhcCce-eE
Q 019298 80 PLTRRAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMA--LLSRPG-----ANILLPRPGFPIYELSAAFRHIE-VR 149 (343)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~~al~~~~~--~l~~~g-----d~vl~~~p~~~~~~~~~~~~g~~-~~ 149 (343)
+++|+++++++.+.++..+++++|++ |+|+++++..+++ .++++| |+|+++.|+|..+...++..|.+ ++
T Consensus 77 ~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~ 156 (412)
T 1ajs_A 77 AEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIR 156 (412)
T ss_dssp HHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeE
Confidence 99999999999665555567899999 9999999999965 345789 99999999999999999999999 99
Q ss_pred EeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC--CC
Q 019298 150 HFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KP 224 (343)
Q Consensus 150 ~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~--~~ 224 (343)
.+++.+++++.+|++++++.+++ +++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++ ..
T Consensus 157 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~ 236 (412)
T 1ajs_A 157 SYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKD 236 (412)
T ss_dssp EEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHH
T ss_pred EEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCccccc
Confidence 99886556778999999998864 56677789999999999999999999999999999999999999988765 12
Q ss_pred CCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH----HHHHHhhhh-ccccCcchHHHHHHHhccc
Q 019298 225 FVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK----VVERMKKYF-DILGDPATFIQVCIMYGCL 298 (343)
Q Consensus 225 ~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~----~~~~l~~~~-~~~~~~~~~~~~a~~~~~l 298 (343)
..++..+. ..++++++.|+||.|+++|+|+||+++... +++ +++.++... ..+..++++.|.++ ..+|
T Consensus 237 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l 310 (412)
T 1ajs_A 237 AWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAK-----EPDSILRVLSQMQKIVRVTWSNPPAQGARIV-ARTL 310 (412)
T ss_dssp THHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHH-HHHH
T ss_pred chHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecC-----CHHHHHHHHHHHHHHHhcccCCCChHHHHHH-HHHH
Confidence 22333232 345789999999999999999999998210 124 555555533 32344688888888 6777
Q ss_pred hhhH------HHHH-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298 299 STIM------QIMI-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 299 ~~~~------~~l~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l 343 (343)
++.. ++++ .+++++++++.+.+.|++++ ++.+..|++|+|+|+++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 365 (412)
T 1ajs_A 311 SDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGL 365 (412)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCC
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCC
Confidence 6542 2444 88899999999999999874 47776889999999864
No 39
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=9.4e-42 Score=316.93 Aligned_cols=331 Identities=13% Similarity=0.113 Sum_probs=257.6
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCC-CCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCC
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAE-ALLSEKFNGYAPTAG 78 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~~~g 78 (343)
|.++++....+++ ++..+...+.+.. +.++|||+.|.+ +.....++++.+.+++.+ .+.....++|++..|
T Consensus 2 ~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g 74 (412)
T 1yaa_A 2 ATLFNNIELLPPD--ALFGIKQRYGQDQ-----RATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITG 74 (412)
T ss_dssp TTTTTTCCCCCCC--TTHHHHHHHHTCC-----CSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTC
T ss_pred cchhccCcccCCC--cHHHHHHHHhcCC-----CCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCC
Confidence 4567888888877 7788877766553 577899999996 322234578999999999 876545568988889
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEE--ecChHHHHHHHH--HHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAM--ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~~al~~~~--~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 154 (343)
.+++|+++++++.+.+|..+++++|++ |+|+++++..++ ..+..+||+|++++|+|..+...++..|.+++.+++.
T Consensus 75 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~ 154 (412)
T 1yaa_A 75 LPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYW 154 (412)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECE
T ss_pred cHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeee
Confidence 999999999999765665567899999 999999999884 3344699999999999999999999999999999873
Q ss_pred CCCCCCCCHHHHHhhhcCC---ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC--CCCCccc
Q 019298 155 PDKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMG 229 (343)
Q Consensus 155 ~~~~~~~d~~~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~--~~~~~~~ 229 (343)
.++++.+|++++++++++. +.++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++ ....++.
T Consensus 155 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 234 (412)
T 1yaa_A 155 ANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVR 234 (412)
T ss_dssp ETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHH
T ss_pred cCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHH
Confidence 2346789999999988653 3444559999999999999999999999999999999999999988765 1222222
Q ss_pred ccC-CCC---CEEEEccCccccCCCCCcEEEEE--E-eCCCCCCCchH----HHHHHhhhh-ccccCcchHHHHHHHhcc
Q 019298 230 VFG-STV---PILTLGSLSKRWIVPGWRLGWFV--T-TDPCGMFRKPK----VVERMKKYF-DILGDPATFIQVCIMYGC 297 (343)
Q Consensus 230 ~~~-~~~---~~i~~~S~sK~~~~~G~r~G~i~--~-~~~~~~~~~~~----~~~~l~~~~-~~~~~~~~~~~~a~~~~~ 297 (343)
.+. ..+ ++++++|+||.|+++|+|+||++ + +.+ ++++ ++++++... ..+.+++.+.|.++ ..+
T Consensus 235 ~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~----~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~-~~~ 309 (412)
T 1yaa_A 235 LGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQA----QNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIV-AKL 309 (412)
T ss_dssp HHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCT----THHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH-HHH
T ss_pred HHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCC----CCHHHHHHHHHHHHHHHhhccCCCChHHHHHH-HHH
Confidence 221 123 78999999999999999999998 5 100 0134 777777643 33456688888888 677
Q ss_pred chhhH------HHHH-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298 298 LSTIM------QIMI-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 298 l~~~~------~~l~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l 343 (343)
|.+.. ++++ .+++++++++.+.+.|++++ ++.+..|++|+|+|+++
T Consensus 310 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 365 (412)
T 1yaa_A 310 LETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL 365 (412)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCC
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCC
Confidence 76542 3444 88899999999999998874 47777889999999763
No 40
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1e-40 Score=306.82 Aligned_cols=308 Identities=26% Similarity=0.360 Sum_probs=252.3
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 80 (343)
|.+|+|....+++ .+..+..... ..+.|||+.|.++ +++++.+.+++.+++.. ...|++..+..
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~--------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~ 64 (381)
T 1v2d_A 1 MRLHPRTEAAKES--IFPRMSGLAQ--------RLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLP 64 (381)
T ss_dssp CCCCGGGGGC-----CHHHHHHHHH--------HHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCH
T ss_pred CchhhhhhhcCcc--HHHHHHHHHh--------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCH
Confidence 7789999988877 5555443222 2357999999854 56789999999998875 45799877999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC--CCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL--PDKG 158 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~ 158 (343)
++|+++++++ ++++++|++|+|+++++..+++++.++||+|++++|+|..+...++..|.+++.++.+ + ++
T Consensus 65 ~l~~~la~~~------~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~ 137 (381)
T 1v2d_A 65 ALREALAEEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTP-EG 137 (381)
T ss_dssp HHHHHHHHHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEET-TE
T ss_pred HHHHHHHHhc------CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCC-cc
Confidence 9999999998 5678899999999999999999999999999999999999999999999999999875 3 24
Q ss_pred CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEE
Q 019298 159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238 (343)
Q Consensus 159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i 238 (343)
+.+|+++|++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+ +....++..+ ..++++
T Consensus 138 ~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~ 215 (381)
T 1v2d_A 138 FRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTF 215 (381)
T ss_dssp EECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEE
T ss_pred CCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEE
Confidence 67999999999988889999999999999999999999999999999999999999999887 4333333333 446789
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHH
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENF 314 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~ 314 (343)
+++|+||.|+++|+|+||++++. ++++.++.... ..++++++.+.++ ..+|... .++++ .+++++++
T Consensus 216 ~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~ 286 (381)
T 1v2d_A 216 TVGSAGKRLEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGV-AEALKLARREGFYEALREGYRRR 286 (381)
T ss_dssp EEEEHHHHTTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHH
T ss_pred EEeechhhcCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCcHHHHHH-HHHHhCcccHHHHHHHHHHHHHH
Confidence 99999999999999999999853 46666665532 2456778888777 5666643 34444 88889999
Q ss_pred HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 315 AGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++.+.+.|++. |+.+..+++|+|+|+++
T Consensus 287 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 314 (381)
T 1v2d_A 287 RDLLAGGLRAM-GLRVYVPEGTYFLMAEL 314 (381)
T ss_dssp HHHHHHHHHHT-TCCEECCSBSSEEEEEC
T ss_pred HHHHHHHHHHC-CCEecCCCcceEEEEec
Confidence 99999999886 88887888999999864
No 41
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.2e-41 Score=315.58 Aligned_cols=311 Identities=17% Similarity=0.162 Sum_probs=258.3
Q ss_pred cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP 95 (343)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 95 (343)
+++.+......-.+ ..++++|+|+.|++. +++++.+.+++.+++.......|++..|..++|+++++++++.+|
T Consensus 27 ~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g 100 (437)
T 3g0t_A 27 SIRDLVALVTNLEK--ATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVN 100 (437)
T ss_dssp CHHHHHHHHHHHHH--HHTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH--hcCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhC
Confidence 56665554433211 126789999999954 678899999999998765446899988999999999999998888
Q ss_pred CCCCCCcEEEecChHHHHHHHHHHhc--CCCC--eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh-
Q 019298 96 YKLTPNDVFVTSGCTQAIDVAMALLS--RPGA--NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA- 170 (343)
Q Consensus 96 ~~~~~~~i~~~~g~~~al~~~~~~l~--~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~- 170 (343)
..+++++|++|+|+++++..++++++ ++|| +|+++.|+|..+...++..|.+++.++++ ++++.+|+++|++++
T Consensus 101 ~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~ 179 (437)
T 3g0t_A 101 IDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYLQ 179 (437)
T ss_dssp CCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHHT
T ss_pred CCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHHh
Confidence 88899999999999999999999998 9999 99999999999999999999999999986 456778999999999
Q ss_pred cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC----cc-cccCC-CCCEEEEccCc
Q 019298 171 DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV----PM-GVFGS-TVPILTLGSLS 244 (343)
Q Consensus 171 ~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~----~~-~~~~~-~~~~i~~~S~s 244 (343)
+++++++++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++.... ++ ..+.. .+++++++|+|
T Consensus 180 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 259 (437)
T 3g0t_A 180 TGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSS 259 (437)
T ss_dssp TTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEEST
T ss_pred cCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCc
Confidence 67889999999999999999999999999999999999999999999887632211 11 33333 56899999999
Q ss_pred cccCCCCCcEEEEEEeCCCCCCCchHHHH-H-----------------Hhhhhc-cccCcchHHHHHHHhccchhhHH--
Q 019298 245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVE-R-----------------MKKYFD-ILGDPATFIQVCIMYGCLSTIMQ-- 303 (343)
Q Consensus 245 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~-~-----------------l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~-- 303 (343)
|.|+++|+|+||++++ +++++ . ++.... ..++++++.+.++ ..+|.....
T Consensus 260 K~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~ 330 (437)
T 3g0t_A 260 KAFSYAGQRIGVLMIS--------GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGM-AAMLKACNDGE 330 (437)
T ss_dssp TTTSCGGGCCEEEEEC--------HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHH-HHHHHHHHTTS
T ss_pred cCCCCccceeEEEEEC--------HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHH-HHHHhCcHhHH
Confidence 9999999999999985 35776 6 655543 2567888888888 677776444
Q ss_pred --HHHHHHHHHHHHHHHHHhhcCCCCceee------CC-CCceEeeecC
Q 019298 304 --IMIHGNFLENFAGSCVPSYKLIPELINF------KS-TGSSLKYLDL 343 (343)
Q Consensus 304 --~l~~~~~~~~~~~~~~~~L~~~~g~~~~------~~-~~g~~~~~~l 343 (343)
+.+.+++++++++.+.+.|+++ |+.+. .| ++|+|+|+++
T Consensus 331 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 378 (437)
T 3g0t_A 331 YNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGY 378 (437)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEec
Confidence 3348999999999999999999 88876 35 8999999863
No 42
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=6.8e-41 Score=314.59 Aligned_cols=297 Identities=18% Similarity=0.269 Sum_probs=242.4
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 108 (343)
++.++|+|+.|++ .++.++.+.+++.+++.. .....|++..|.++||+++++++. +|.++++++|++|+|
T Consensus 67 ~~~~~i~l~~g~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~G 140 (449)
T 3qgu_A 67 PDAKIISLGIGDT----TEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISDG 140 (449)
T ss_dssp TTCCCEECSSCCC----CCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEESC
T ss_pred CCCCEEEeeCCCC----CCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEccC
Confidence 3678999999984 477899999999998874 345689888899999999999997 777888999999999
Q ss_pred hHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCce----------eEEeecCCCCCCCCCHHHHHhhhcCCceEEE
Q 019298 109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE----------VRHFDLLPDKGWEVDLDDIESLADQNTVALV 178 (343)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 178 (343)
+++++..+ ..++++||+|++++|+|.++...++..|.+ ++.++++.++++..|++++ +++++++
T Consensus 141 ~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~ 214 (449)
T 3qgu_A 141 SKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIF 214 (449)
T ss_dssp HHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCCSEEE
T ss_pred HHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----CCCCEEE
Confidence 99999998 788899999999999999999999999988 8999887665666665442 4788999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEE
Q 019298 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
+++||||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..+.. .+++++++||||+||++|+|+||+
T Consensus 215 l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 294 (449)
T 3qgu_A 215 FCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWT 294 (449)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEE
T ss_pred EeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEE
Confidence 9999999999999999999999999999999999999999988765555555543 457899999999999999999999
Q ss_pred EEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298 258 VTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKST 334 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~ 334 (343)
+++++........+...+.... ..+.+++++.|.++ .++|.+ ..++++ .+++++++++.+.+.|+++ |+.+..++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 372 (449)
T 3qgu_A 295 VVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGG-LACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYGGD 372 (449)
T ss_dssp ECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHH-HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEESS
T ss_pred ecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCC
Confidence 9865321000001222333333 22457788889888 666664 334444 8899999999999999988 88887889
Q ss_pred CceEeeecC
Q 019298 335 GSSLKYLDL 343 (343)
Q Consensus 335 ~g~~~~~~l 343 (343)
+|+|+|+++
T Consensus 373 ~~~~~~~~~ 381 (449)
T 3qgu_A 373 DAPYIWVGF 381 (449)
T ss_dssp SSSEEEEEC
T ss_pred CeeEEEEEC
Confidence 999999874
No 43
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=1.8e-40 Score=307.67 Aligned_cols=320 Identities=20% Similarity=0.262 Sum_probs=260.7
Q ss_pred ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCH
Q 019298 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP 80 (343)
Q Consensus 3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~ 80 (343)
+|+|..+.+++ .++.+......-. ..+.+.|||+.|.|+. ...+++.+.+++.+++... ... |++..|..
T Consensus 7 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~ 78 (407)
T 2zc0_A 7 LAGRANWIKGS--ALADVMKKASELQ---KKGVKLISLAAGDPDP--ELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIP 78 (407)
T ss_dssp SCGGGGGCCCC--HHHHHHHHHHHHH---HSSCCCEECCSCCCCT--TTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCH
T ss_pred hhhhhccCCch--HHHHHHHhhhccc---CCCCceEeCCCCCCCc--hhCCHHHHHHHHHHHHhhcccccc-CCCCCCCH
Confidence 67888888877 5666665444211 1145789999998762 2346789999999888653 234 98888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
++|+++++++.+.+|.++++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.+++ +
T Consensus 79 ~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~---~ 155 (407)
T 2zc0_A 79 ELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND---G 155 (407)
T ss_dssp HHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---E
T ss_pred HHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---C
Confidence 9999999999887787788999999999999999999999999999999999999999999999999999988542 3
Q ss_pred CCHHHHHhhhc----C--CceEE-EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 161 VDLDDIESLAD----Q--NTVAL-VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 161 ~d~~~l~~~~~----~--~~~~i-~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
+|+++|+++++ + +++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..++.
T Consensus 156 ~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 235 (407)
T 2zc0_A 156 MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDN 235 (407)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCS
T ss_pred CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCC
Confidence 89999999887 5 67776 46799999999999999999999999999999999999999887655455555555
Q ss_pred CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhh--H-HHHH-HH
Q 019298 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTI--M-QIMI-HG 308 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~--~-~~l~-~~ 308 (343)
.+++++++|+||.|+ +|+|+||++++ ++++++++..... ..+++++.+.++ .+++... . .+++ .+
T Consensus 236 ~~~~i~~~s~sK~~~-~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~ 305 (407)
T 2zc0_A 236 EGRVIVAGTLSKVLG-TGFRIGWIIAE--------GEILKKVLMQKQPIDFCAPAISQYIA-LEYLKRGYFEKYHLEGAL 305 (407)
T ss_dssp SCCEEEEEESTTTTC-TTSCCEEEECC--------HHHHHHHHHHHTTTTSSSCHHHHHHH-HHHHHTTHHHHHTTTTHH
T ss_pred CCCEEEEcccccccC-CCcceEEEecC--------HHHHHHHHHHHHhhcCCCCHHHHHHH-HHHHHcCCchHHHHHHHH
Confidence 568999999999998 99999999984 3688888766532 345688888887 6666653 2 3333 78
Q ss_pred HHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298 309 NFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 309 ~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l 343 (343)
++++++++.+.+.|++ +|++.+..|++|+|+|+++
T Consensus 306 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 341 (407)
T 2zc0_A 306 LGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFL 341 (407)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEc
Confidence 8899999999999987 6788876788999999874
No 44
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=4.2e-41 Score=313.10 Aligned_cols=327 Identities=12% Similarity=0.099 Sum_probs=254.5
Q ss_pred cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298 4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (343)
Q Consensus 4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l 82 (343)
+.+..+.+++ +++.+.....+.... .++.++|+|++|.|.. .+.+++++.+.+++.+.... ....|++..|.+++
T Consensus 10 ~~~~~~~~~~--~~~~~~~~~~~~~~~-~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l 85 (418)
T 3rq1_A 10 KHAKGKKLKD--VIFVTAGQAQADAKE-NGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDS-EHVGYAPIAGIPDF 85 (418)
T ss_dssp TTTTTCCCCC--HHHHHHHHHHHHHHH-HCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHH-HHHSCCCTTCCHHH
T ss_pred hhcCCCCCCc--hHHHHHHHHHhhhhh-hcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccc-ccCCCCCCCChHHH
Confidence 4555556666 678887777665431 2355899999998621 23477889998888765432 23479998899999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (343)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 162 (343)
|+++++++.+.++.. .+++|++|+|+++++..++++++++||+|++++|+|..|...++..|.+++.+++.+++ +.+|
T Consensus 86 r~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d 163 (418)
T 3rq1_A 86 LCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFN 163 (418)
T ss_dssp HHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBC
T ss_pred HHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcC
Confidence 999999997644321 12399999999999999999999999999999999999999999999999999886544 7899
Q ss_pred HHHHHhhhcC----Cce-EEEEeCC-CCCcccccCHHHHHHHHHHHh------hcCcEEEEccCCCccccCCCCCCccc-
Q 019298 163 LDDIESLADQ----NTV-ALVIINP-GNPCGNVYSYQHLQKLAETAN------KLKTLVIADEVYGHLVFGDKPFVPMG- 229 (343)
Q Consensus 163 ~~~l~~~~~~----~~~-~i~~~~p-~nptG~~~~~~~l~~l~~~~~------~~~~~~i~D~ay~~~~~~~~~~~~~~- 229 (343)
++++++.+++ +++ ++++++| |||||.+++.+++++|+++|+ +||+++|+||+|.++.+++....++.
T Consensus 164 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 243 (418)
T 3rq1_A 164 HEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFN 243 (418)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGG
T ss_pred HHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHH
Confidence 9999998874 555 7888999 999999999999999999999 89999999999999887654322222
Q ss_pred ccCC-CCC--EEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-----ccCcchHHHHHHHhccchhh
Q 019298 230 VFGS-TVP--ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-----LGDPATFIQVCIMYGCLSTI 301 (343)
Q Consensus 230 ~~~~-~~~--~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~a~~~~~l~~~ 301 (343)
.... .++ +++++||||+|+++|+|+||+++... ++++++.++..... +..++.++|.++ ..+|.+.
T Consensus 244 ~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~ 317 (418)
T 3rq1_A 244 KFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISD-----DEEIADEFFEVNKSTSRATWSNICRPAMRTM-ANIVADP 317 (418)
T ss_dssp GGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEES-----SHHHHHHHHHHHHHHHHHHTSSCCHHHHHHH-HHHHTCH
T ss_pred HHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeC-----CHHHHHHHHHHHHHHHhhccCCCchHHHHHH-HHHhCCH
Confidence 2222 234 68999999999999999999987210 14688877765321 245788888888 6667654
Q ss_pred ---HHHHH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 302 ---MQIMI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 302 ---~~~l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
..|.+ .+++++++++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 365 (418)
T 3rq1_A 318 AKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPMLPYRGGFFITIPT 365 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCCCCSSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCceEEEEcCC
Confidence 22433 6778899999999999988 88888999999999863
No 45
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=5.7e-41 Score=307.77 Aligned_cols=305 Identities=20% Similarity=0.247 Sum_probs=248.4
Q ss_pred CcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 019298 10 NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEY 89 (343)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 89 (343)
.+++ ++..+.....+.. .++ ++|||+.|++. ++.++.+.+++.+++. ....|++..|..++|++++++
T Consensus 4 ~~~~--~~~~~~~~~~~~~---~~g-~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~ 71 (376)
T 3ezs_A 4 FEPY--PFERLRALLKEIT---PKK-RGLDLGIGEPQ----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGF 71 (376)
T ss_dssp CCCC--HHHHHHHHHTTCC---CSS-CCCBCSSCCCC----SCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHH
T ss_pred CCcc--hHHHHHHHHHhhh---ccC-CEEEeCCCCCC----CCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHH
Confidence 3444 5666655444322 235 89999999954 6678999999988873 346899988999999999999
Q ss_pred HhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC--CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHH
Q 019298 90 LSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP--GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE 167 (343)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~--gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 167 (343)
+.+.+|..+++++|++|+|+++++..++++++++ ||+|+++.|+|..+...++..|.+++.++++.++++.+ +++
T Consensus 72 l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~l~ 148 (376)
T 3ezs_A 72 FKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP---SLN 148 (376)
T ss_dssp HHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC---CCC
T ss_pred HHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch---hHH
Confidence 9888888888999999999999999999999999 99999999999999999999999999999876544433 555
Q ss_pred hhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-----CCCCEEEEcc
Q 019298 168 SLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-----STVPILTLGS 242 (343)
Q Consensus 168 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-----~~~~~i~~~S 242 (343)
+.+.++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++.........+ ..+++++++|
T Consensus 149 ~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 228 (376)
T 3ezs_A 149 EKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHS 228 (376)
T ss_dssp HHHHHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEE
T ss_pred hhhccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEec
Confidence 56656789999999999999999999999999999999999999999999988763322222111 4568999999
Q ss_pred CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHh
Q 019298 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPS 321 (343)
Q Consensus 243 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 321 (343)
+||.||++|+|+||++++ +++++.++..... .++++++.+.++ .++|.....+-+.+++++++++.+.+.
T Consensus 229 ~sK~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~l~~~ 299 (376)
T 3ezs_A 229 LSKRSSAPGLRSGFIAGD--------SRLLEKYKAFRAYLGYTSANAIQKAS-EAAWLDDRHAEFFRNIYANNLKLARKI 299 (376)
T ss_dssp STTTTTCGGGCCEEEEEC--------HHHHHHHHHHHTTTCCCCCHHHHHHH-HHHHHCSHHHHHHHHHHHHHHHHHHHH
T ss_pred chhccCCccceeEEEeeC--------HHHHHHHHHHHhhhcCCCChHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999984 4788888876543 457788888888 666665434344889999999999999
Q ss_pred hcCCCCceeeCCCCceEeeecC
Q 019298 322 YKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 322 L~~~~g~~~~~~~~g~~~~~~l 343 (343)
|+ ++. .|++|+|+|+++
T Consensus 300 l~---~~~--~~~~~~~~~~~~ 316 (376)
T 3ezs_A 300 FK---NTL--IYPYSFYVYLPV 316 (376)
T ss_dssp ST---TCC--CCSBSSEEEEEC
T ss_pred hc---CCC--CCCcceEEEEEC
Confidence 88 444 688999999874
No 46
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=1e-41 Score=316.47 Aligned_cols=322 Identities=16% Similarity=0.147 Sum_probs=240.7
Q ss_pred ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (343)
Q Consensus 3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l 82 (343)
.+.|....+++ ++..++..+..+. .+++|||++|+|. .++.++.+.++++++. .....+|.+..|.++|
T Consensus 16 ~~~~~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~g~~~---d~~~~~~v~~a~~~a~-~~~~~~y~~~~g~~~l 84 (409)
T 4eu1_A 16 TQGPGSMGKPD--PILGLGQDFRMDP-----AKRKVNLSIGVYR---DDADQPFVLECVKQAT-LGTNMDYAPVTGIASF 84 (409)
T ss_dssp -------------CHHHHHHHHHHCC-----CSSCEECCCSSCC---CTTSCCCCCHHHHTCC-CCSCCCCCCTTCCHHH
T ss_pred HhhcCCCCCCC--hHHHHHHHHhhCC-----CcCceeeeeeEEE---CCCCCEeecHHHHhcC-ccccccCCCCCCcHHH
Confidence 46677888888 7888888887765 5789999999962 2344455666666653 3345689998999999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEE--EecChHHHHHHHH---HHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298 83 RRAIAEYLSRDLPYKLTPNDVF--VTSGCTQAIDVAM---ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157 (343)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~--~~~g~~~al~~~~---~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 157 (343)
|+++++++.+..+..+++++|. .+.|+++++..+. +.++++||+|++++|+|..+...++..|.+++.+++..++
T Consensus 85 r~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 164 (409)
T 4eu1_A 85 VEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPA 164 (409)
T ss_dssp HHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETT
T ss_pred HHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCc
Confidence 9999999843222223378884 5899999988754 4456899999999999999999999999999999886566
Q ss_pred CCCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCccccc-
Q 019298 158 GWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVF- 231 (343)
Q Consensus 158 ~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~- 231 (343)
++.+|++++++.++ +.++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++. ...++..+
T Consensus 165 ~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~ 244 (409)
T 4eu1_A 165 TKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLV 244 (409)
T ss_dssp TTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH
T ss_pred CCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHH
Confidence 78899999999885 2455667799999999999999999999999999999999999999988762 11222222
Q ss_pred CCCCCEEEEccCccccCCCCCcEEEE--EEeCCCCCCCchH----HHHHHhhhh-ccccCcchHHHHHHHhccchhh---
Q 019298 232 GSTVPILTLGSLSKRWIVPGWRLGWF--VTTDPCGMFRKPK----VVERMKKYF-DILGDPATFIQVCIMYGCLSTI--- 301 (343)
Q Consensus 232 ~~~~~~i~~~S~sK~~~~~G~r~G~i--~~~~~~~~~~~~~----~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~--- 301 (343)
+..+++++++||||+|+++|+|+||+ ++++ ++ +++.++... ....+++.+.|.++ ..+|.+.
T Consensus 245 ~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~ 316 (409)
T 4eu1_A 245 DMVPNLIVAQSFSKNFGLYGHRCGALHISTAS-------AEEAKRLVSQLALLIRPMYNNPPLYGAWVV-SSILKDPQLT 316 (409)
T ss_dssp TTSSCCEEEEECTTTSSCGGGCCEEEEEECSS-------HHHHHHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHCHHHH
T ss_pred hhCCcEEEEecCcccccCccCCceEEEEEeCC-------HHHHHHHHHHHHHHHhhhcCCCChHHHHHH-HHHhCCHHHH
Confidence 34568899999999999999999997 6643 45 666666554 33556778888888 6666653
Q ss_pred HHH---HH-HHHHHHHHHHHHHHhhcCCC--C-ceeeCCCCceEeeecC
Q 019298 302 MQI---MI-HGNFLENFAGSCVPSYKLIP--E-LINFKSTGSSLKYLDL 343 (343)
Q Consensus 302 ~~~---l~-~~~~~~~~~~~~~~~L~~~~--g-~~~~~~~~g~~~~~~l 343 (343)
.+| ++ .+++++++++.+.+.|++++ + +.+..|++|+|+|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 365 (409)
T 4eu1_A 317 ALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGL 365 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCC
Confidence 123 22 88899999999999998872 1 6777899999999864
No 47
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.3e-40 Score=309.03 Aligned_cols=317 Identities=23% Similarity=0.342 Sum_probs=259.6
Q ss_pred ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (343)
Q Consensus 3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l 82 (343)
+|+|....+++ ++..+...+.+... .++++++|+.|.+. ++.++.+.+++ +++... ...|++..|..++
T Consensus 16 ~~~~~~~~~~~--~~~~~~~~~~~~~~---~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l 84 (409)
T 2gb3_A 16 FSDRVLLTEES--PIRKLVPFAEMAKK---RGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWEL 84 (409)
T ss_dssp CCHHHHSCCCC--TTGGGHHHHHHHHH---TTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHH
T ss_pred HHHHhhcCCcc--HHHHHHHHHHHHHh---cCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHH
Confidence 56777788877 55555555443321 26789999999953 56778999999 887653 3579888899999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (343)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 162 (343)
|+++++++.+.+|.++++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++.+
T Consensus 85 ~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~- 163 (409)
T 2gb3_A 85 REAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI- 163 (409)
T ss_dssp HHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-
Confidence 9999999998888888899999999999999999999999999999999999999999999999999998865445555
Q ss_pred HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEc
Q 019298 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLG 241 (343)
Q Consensus 163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~ 241 (343)
+++|+++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++. ..++ +.. .+++++++
T Consensus 164 ~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~--~~~~~~~~i~~~ 240 (409)
T 2gb3_A 164 PQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASA--LSIESDKVVVID 240 (409)
T ss_dssp CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCG--GGSCCTTEEEEE
T ss_pred HHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCc--cccCCCCEEEEe
Confidence 8899998888889999999999999999999999999999999999999999999887653 2222 221 35789999
Q ss_pred cCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHH
Q 019298 242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVP 320 (343)
Q Consensus 242 S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~ 320 (343)
|+||.|+++|+|+||+++++ +++++.++.......+++++.+.++ .++|+....+++ .+++++++++.+.+
T Consensus 241 s~sK~~g~~G~r~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~ 312 (409)
T 2gb3_A 241 SVSKKFSACGARVGCLITRN-------EELISHAMKLAQGRLAPPLLEQIGS-VGLLNLDDSFFDFVRETYRERVETVLK 312 (409)
T ss_dssp ESTTTTTCGGGCCEEEECSC-------HHHHHHHHHHHHHSCCCCHHHHHHH-HHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhccCCccceEEEEEECc-------HHHHHHHHHHHhccCCCCHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999853 2577877766432117788888887 666654344555 78889999999999
Q ss_pred hhcCCCCcee-eCCCCceEeeecC
Q 019298 321 SYKLIPELIN-FKSTGSSLKYLDL 343 (343)
Q Consensus 321 ~L~~~~g~~~-~~~~~g~~~~~~l 343 (343)
.|+++ |+.+ ..|++|+|+|+++
T Consensus 313 ~L~~~-g~~~~~~~~~~~~~~~~~ 335 (409)
T 2gb3_A 313 KLEEH-GLKRFTKPSGAFYITAEL 335 (409)
T ss_dssp HHHHT-TCCCBCCCSBSSEEEEEC
T ss_pred HHHHc-CceeeeCCCeeEEEEEEe
Confidence 99988 8887 7889999999864
No 48
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=3.2e-41 Score=314.67 Aligned_cols=316 Identities=20% Similarity=0.246 Sum_probs=256.4
Q ss_pred ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCH
Q 019298 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP 80 (343)
Q Consensus 3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~ 80 (343)
+|+|....+++ +++.+... . .+++.|||+.|.|+. ...+++.+.+++.++++.. ....|++..|.+
T Consensus 21 ~~~~~~~~~~~--~~~~~~~~----~----~~~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~ 88 (425)
T 1vp4_A 21 ISKIGQNMKSS--IIREILKF----A----ADKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDP 88 (425)
T ss_dssp CCHHHHTCCCC--CHHHHTTT----T----TSTTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCH
T ss_pred hhhhhhcCCCc--HHHHHHHh----c----cCCCceeCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCH
Confidence 56666666666 55554331 1 145789999998762 2346788999999888653 235798888999
Q ss_pred HHHHHHHHHHhhhCCCC-CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~-~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
++|+++++++.+++|.. +++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++++++
T Consensus 89 ~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~--- 165 (425)
T 1vp4_A 89 VLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD--- 165 (425)
T ss_dssp HHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---
T ss_pred HHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---
Confidence 99999999997766766 78899999999999999999999999999999999999999999999999999988642
Q ss_pred CCCHHHHHhhhcC--------CceEE-EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc
Q 019298 160 EVDLDDIESLADQ--------NTVAL-VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV 230 (343)
Q Consensus 160 ~~d~~~l~~~~~~--------~~~~i-~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~ 230 (343)
++|+++|++.+++ ++++| ++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++....++..
T Consensus 166 ~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 245 (425)
T 1vp4_A 166 GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFK 245 (425)
T ss_dssp EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHH
T ss_pred CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHH
Confidence 3899999998865 67777 47899999999999999999999999999999999999999887655445555
Q ss_pred cCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHH-
Q 019298 231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMI- 306 (343)
Q Consensus 231 ~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~- 306 (343)
++..+++++++|+||.|+ +|+|+||++++ +++++.++.... ...+++++.|.++ ..+|... .++++
T Consensus 246 ~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~ 315 (425)
T 1vp4_A 246 IGGPERVVLLNTFSKVLA-PGLRIGMVAGS--------KEFIRKIVQAKQSADLCSPAITHRLA-ARYLERYDLLEQLKP 315 (425)
T ss_dssp HHCTTTEEEEEESTTTTC-GGGCEEEEECC--------HHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHHSCHHHHTHH
T ss_pred hCCCCCEEEEeccccccc-cccceEEEeeC--------HHHHHHHHHHhhhhcCCCCHHHHHHH-HHHHhcCCHHHHHHH
Confidence 545568999999999999 99999999985 368888876543 2356688888888 6666653 34444
Q ss_pred HHHHHHHHHHHHHHhhcC-CC---CceeeCCCCceEeeecC
Q 019298 307 HGNFLENFAGSCVPSYKL-IP---ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 307 ~~~~~~~~~~~~~~~L~~-~~---g~~~~~~~~g~~~~~~l 343 (343)
.+++++++++.+.+.|++ +| |+.+..|++|+|+|+++
T Consensus 316 ~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~ 356 (425)
T 1vp4_A 316 TIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTL 356 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEc
Confidence 788899999999999987 45 68877889999999874
No 49
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=2.6e-40 Score=304.79 Aligned_cols=294 Identities=18% Similarity=0.302 Sum_probs=253.0
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.++++|+.|++ .+++++.+.+++.+++.+. ...|++ +..++++++++++.+.+|..+++++|++|+|+++++
T Consensus 31 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~ 103 (391)
T 4dq6_A 31 TNDLLPMWVADM----DFKAAPCIIDSLKNRLEQE-IYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAI 103 (391)
T ss_dssp CSCSEECCSSSC----SSCCCHHHHHHHHHHHTTC-CCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCceeccccCC----CCCCCHHHHHHHHHHHhCC-CCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHH
Confidence 578899999984 4788999999999998753 346765 569999999999999888778899999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC--CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL--PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~ 191 (343)
..++++++++||+|+++.|+|..+...++..|.+++.++++ .++++.+|++++++++++ ++++++++|+||||.+++
T Consensus 104 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~ 182 (391)
T 4dq6_A 104 SLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWT 182 (391)
T ss_dssp HHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcC
Confidence 99999999999999999999999999999999999999887 445677999999999987 899999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~ 269 (343)
.+++++|+++|++||+++|+||+|..+.+++....++..+.. .+++++++|+||.++++|+|+||+++++ +
T Consensus 183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~ 255 (391)
T 4dq6_A 183 KDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD-------E 255 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred HHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCC-------H
Confidence 999999999999999999999999999988766556555543 3689999999999999999999999863 3
Q ss_pred HHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298 270 KVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 270 ~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l 343 (343)
++++.++.... ..++++++.+.++ .+++....++++ .+++++++++.+.+.|++ +||+.+..+++++++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 332 (391)
T 4dq6_A 256 KDYKLLDDAFTRIDIKRNNCFSLVAT-EASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDF 332 (391)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEEC
T ss_pred HHHHHHHHHHHhhcCCCCCHHHHHHH-HHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEh
Confidence 67887776642 2346788888877 566655455565 888999999999999987 7899988999999999864
No 50
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1.7e-40 Score=306.15 Aligned_cols=293 Identities=18% Similarity=0.254 Sum_probs=243.7
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH-HHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL-TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~-lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+++|+|+.|++ .+++++.+.+++.+++... ...|++. ..+ +|+++++++.+.+|..+++++|++|+|+++++
T Consensus 28 ~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al 100 (390)
T 1d2f_A 28 ADLLPFTISDM----DFATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMV 100 (390)
T ss_dssp --CEECCSSSC----SSCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHH
T ss_pred CCeeEeeecCC----CCCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHH
Confidence 47899999984 3678899999999988643 4578774 678 99999999998888888899999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC-CCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccC
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~ 191 (343)
..++++++++||+|+++.|+|.++...++..|.+++.++++.++ +|.+|+++|++++++ +++++++++|+||||.+++
T Consensus 101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~ 180 (390)
T 1d2f_A 101 SELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT 180 (390)
T ss_dssp HHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcC
Confidence 99999999999999999999999999999999999999886543 467999999999976 7889999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
.+++++|+++|++||+++|+||+|..+.+++..+.++..+....... +.|+||.|+++|+|+||+++++ +++
T Consensus 181 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~-------~~~ 252 (390)
T 1d2f_A 181 CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN-------SSS 252 (390)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS-------HHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC-------HHH
Confidence 99999999999999999999999999988765554544443221023 9999999999999999999853 467
Q ss_pred HHHHhhhhc--cc-cCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298 272 VERMKKYFD--IL-GDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~--~~-~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l 343 (343)
++.++.... .. ++++++.+.++ .+++....++++ .+++++++++.+.+.|++ +||+.+..+++++++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 328 (390)
T 1d2f_A 253 RDAYLSALKGRDGLSSPSVLALTAH-IAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDL 328 (390)
T ss_dssp HHHHHHHHHTTSCCCSCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEEC
T ss_pred HHHHHHHHhhhcccCCCCHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEc
Confidence 777776543 23 46788888777 566664345555 888899999999999988 8898877889999999864
No 51
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=5.4e-40 Score=306.96 Aligned_cols=296 Identities=21% Similarity=0.310 Sum_probs=235.3
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 108 (343)
++.++|+|++|+++ ++.++.+.+++.+++.. ....+|++..|.++||+++++|+.+ ++++++++|++|+|
T Consensus 54 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~i~~t~G 127 (432)
T 3ei9_A 54 PDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDDVFVSDG 127 (432)
T ss_dssp TTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGGEEEESC
T ss_pred CCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcceEEECCC
Confidence 35689999999854 78899999999998863 2345898888999999999999973 56678899999999
Q ss_pred hHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCc------------eeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298 109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHI------------EVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (343)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 176 (343)
+++++..+ ..++++||+|++++|+|.++...++..|. +++.++++.++++..|+++ .+++++
T Consensus 128 ~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~ 201 (432)
T 3ei9_A 128 AKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VGRTDI 201 (432)
T ss_dssp HHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CCCCSE
T ss_pred hHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----CCCCCE
Confidence 99999975 67788999999999999999998888874 6777877655555566543 246889
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEE
Q 019298 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLG 255 (343)
Q Consensus 177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G 255 (343)
+++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++.. .++..+. ..+++++++|+||+|+++|+|+|
T Consensus 202 v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G 280 (432)
T 3ei9_A 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNP-RSIFEIPGAEEVAMETASFSNYAGFTGVRLG 280 (432)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCC-SSGGGSTTGGGTEEEEEESHHHHCTTTTCCE
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCC-CChhhcCCCCCeEEEEecchhccCCcccceE
Confidence 999999999999999999999999999999999999999999877543 2333332 23578999999999999999999
Q ss_pred EEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298 256 WFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFK 332 (343)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~ 332 (343)
|+++++.........+++.+..... ...++++++|.++ .+++.+ ..++++ .+++++++++.+.+.|+++ |+.+..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 358 (432)
T 3ei9_A 281 WTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGA-LACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYG 358 (432)
T ss_dssp EEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred EEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHH-HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecC
Confidence 9999753200000113566665533 3456788888887 556543 334555 8899999999999999988 888778
Q ss_pred CCCceEeeecC
Q 019298 333 STGSSLKYLDL 343 (343)
Q Consensus 333 ~~~g~~~~~~l 343 (343)
+++|+|+|+++
T Consensus 359 ~~~~~~~~~~~ 369 (432)
T 3ei9_A 359 GKNAPYVWVHF 369 (432)
T ss_dssp CSSSSEEEEEC
T ss_pred CCcceEEEEEC
Confidence 88999999875
No 52
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=4.2e-40 Score=306.76 Aligned_cols=295 Identities=15% Similarity=0.227 Sum_probs=255.0
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
++++|+|++|++ .++.+|.+.+++.+++... ...|++. ..++++++++++.+.+++.+++++|++++|+++++
T Consensus 60 g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~ 132 (421)
T 3l8a_A 60 NPELLQMWVADM----DFLPVPEIKEAIINYGREH-IFGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI 132 (421)
T ss_dssp CTTCEECCSSCC----CSCCCHHHHHHHHHHHHHC-CSSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCeeecccCCC----CCCCCHHHHHHHHHHHhcC-CcCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence 578999999984 4788999999999998753 3467663 48999999999999888888999999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC-CCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccC
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~ 191 (343)
..++++++++||+|+++.|+|.++...+...|.+++.+++. .+.++.+|+++|+++++ ++++++++++|+||||.+++
T Consensus 133 ~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~ 212 (421)
T 3l8a_A 133 SIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWD 212 (421)
T ss_dssp HHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999886 45567799999999997 68999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~ 269 (343)
.+++++|+++|++||+++|+||+|.++.+++....++..+.. .++++++.|+||+|+++|+|+||+++++ +
T Consensus 213 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~-------~ 285 (421)
T 3l8a_A 213 NDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN-------E 285 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC-------H
Confidence 999999999999999999999999999988766666655543 4688999999999999999999999863 4
Q ss_pred HHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 270 KVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 270 ~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++.++.... ...+++++++.++ .+++....++++ .+++++++++.+.+.|+++|++.+..+++++++|+++
T Consensus 286 ~l~~~~~~~~~~~~~~~~n~~~~~a~-~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~ 361 (421)
T 3l8a_A 286 SLRRKFQYRQLANNQHEVPTVGMIAT-QAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDF 361 (421)
T ss_dssp HHHHHHHHHHHHTTCSCCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEEC
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEec
Confidence 68887776642 2447788888888 666665566666 8888999999999999887889988999999999875
No 53
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=5.1e-41 Score=310.19 Aligned_cols=328 Identities=17% Similarity=0.152 Sum_probs=241.5
Q ss_pred CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298 5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPT-VHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 83 (343)
++..+.+++ +++.+...+.+.. ++++|||+.|.+. .....++++.+.+++.+++.....++|++..|..++|
T Consensus 3 ~~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr 75 (396)
T 2q7w_A 3 ENITAAPAD--PILGLADLFRADE-----RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFG 75 (396)
T ss_dssp TTCCCCCC------------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHH
T ss_pred cccccCCCc--hHHHHHHHHhccC-----CCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHH
Confidence 456667766 6666666555433 5678999999842 1122467799999999887654556898888999999
Q ss_pred HHHHHHHhhhCCCCCCCCcEEE--ecChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 84 RAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 84 ~~ia~~~~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
+++++++.+..+..+++++|++ |+|+++++..+++.+. .+||+|+++.|+|..+...++..|.+++.+++.+++++
T Consensus 76 ~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 155 (396)
T 2q7w_A 76 RCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155 (396)
T ss_dssp HHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTT
T ss_pred HHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCC
Confidence 9999999654333356889998 9999999999987763 69999999999999999999999999999988654567
Q ss_pred CCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC-CCCCcccccCC-C
Q 019298 160 EVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFGS-T 234 (343)
Q Consensus 160 ~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~-~~~~~~~~~~~-~ 234 (343)
.+|++++++.+++ +++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++ ....++..+.. .
T Consensus 156 ~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 235 (396)
T 2q7w_A 156 TLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMH 235 (396)
T ss_dssp EECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHC
T ss_pred CcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcC
Confidence 8999999998865 35677889999999999999999999999999999999999999988763 12222332322 3
Q ss_pred CCEEEEccCccccCCCCCcEEEEEE--eCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhh------HHHH
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVT--TDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTI------MQIM 305 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~------~~~l 305 (343)
+++++++|+||.|+++|+|+||+++ ++++.+ .++++.+.... ..+..++++.|.++ ..+|++. .+++
T Consensus 236 ~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~l~~~~~~~~ 311 (396)
T 2q7w_A 236 KELIVASSYSXNFGLYNERVGACTLVAADSETV---DRAFSQMKAAIRANYSNPPAHGASVV-ATILSNDALRAIWEQEL 311 (396)
T ss_dssp SCEEEEEECTTTTTCGGGCCEEEEEECSSHHHH---HHHHHHHHHHHHTTTSSCCHHHHHHH-HHHHTSHHHHHHHHHHH
T ss_pred CcEEEEEeccccccccccccceEEEEcCCHHHH---HHHHHHHHHHHhhccCCCCcHHHHHH-HHHhcChhhHHHHHHHH
Confidence 5789999999999999999999986 331000 13555555432 23445588888887 6666653 2344
Q ss_pred H-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298 306 I-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 306 ~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l 343 (343)
+ .+++++++++.+.+.|++++ ++.+..|++|+|+|+++
T Consensus 312 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 353 (396)
T 2q7w_A 312 TDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGL 353 (396)
T ss_dssp HHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecC
Confidence 4 78889999999999998873 37776889999999864
No 54
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=7.4e-40 Score=306.33 Aligned_cols=304 Identities=18% Similarity=0.292 Sum_probs=247.4
Q ss_pred HhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-----------CCCCCCCCCCHHHHHHHHHHHhhh
Q 019298 25 MQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-----------FNGYAPTAGLPLTRRAIAEYLSRD 93 (343)
Q Consensus 25 ~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~Y~~~~g~~~lr~~ia~~~~~~ 93 (343)
.+.++...++...|+|+.+. + ....+.+.+++++...... ..+|++..|.++||+++++++.+.
T Consensus 28 ~~~y~~~~~p~~~i~lg~~~----~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~ 102 (435)
T 3piu_A 28 KNPYHEVHNTNGIIQMGLAE----N-QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEI 102 (435)
T ss_dssp HSBCBTTTBTTSBEECSSCC----C-CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCcccCCCCeEEecccc----c-cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHh
Confidence 34455445677788999976 2 2347888888877544221 146999899999999999999865
Q ss_pred CC--CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH-hcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 94 LP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 94 ~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
++ ..+++++|++|+|+++++..++++++++||.|+++.|+|..+...+. ..|.+++.+++++++++.+|+++|++++
T Consensus 103 ~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 182 (435)
T 3piu_A 103 RGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAY 182 (435)
T ss_dssp TTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHH
T ss_pred hCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHH
Confidence 44 45778999999999999999999999999999999999999988777 6899999999887667889999999988
Q ss_pred cC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC----------C
Q 019298 171 DQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS----------T 234 (343)
Q Consensus 171 ~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~----------~ 234 (343)
++ ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..+.. .
T Consensus 183 ~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 262 (435)
T 3piu_A 183 QEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVW 262 (435)
T ss_dssp HHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGG
T ss_pred HHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCC
Confidence 75 7889999999999999999999999999999999999999999998887765544433322 4
Q ss_pred CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhH---HHHH-HHHH
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIM---QIMI-HGNF 310 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~---~~l~-~~~~ 310 (343)
+++++++|+||.||++|+|+||+++++ +++.+.++.... ....+++.+.++ .+++.+.. ++++ .+++
T Consensus 263 ~~~i~i~s~sK~~g~~G~r~G~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~ 333 (435)
T 3piu_A 263 QRVHVVYSLSKDLGLPGFRVGAIYSND-------DMVVAAATKMSS-FGLVSSQTQHLL-SAMLSDKKLTKNYIAENHKR 333 (435)
T ss_dssp GGEEEEEESSSSSCCGGGCEEEEEESC-------HHHHHHHHHHGG-GSCCCHHHHHHH-HHHHHCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeeecccCCCceeEEEEEeCC-------HHHHHHHHHHhh-cCCCCHHHHHHH-HHHhcChHHHHHHHHHHHHH
Confidence 678999999999999999999999854 357777765544 445677888777 56666432 1333 7888
Q ss_pred HHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 311 LENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 311 ~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus 334 ~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~l 365 (435)
T 3piu_A 334 LKQRQKKLVSGLQKS-GISCLNGNAGLFCWVDM 365 (435)
T ss_dssp HHHHHHHHHHHHHTT-TCEECCCCSSSEEEEEC
T ss_pred HHHHHHHHHHHHHhc-CCcccCCCeeEEEEEEc
Confidence 999999999999988 88887899999999875
No 55
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=9.2e-41 Score=312.00 Aligned_cols=295 Identities=15% Similarity=0.204 Sum_probs=242.1
Q ss_pred cceeEeccCCC-CCCCCCCCcHHH--HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc---EEEecC
Q 019298 35 KKVISLAMGDP-TVHSCFHTTHVA--TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND---VFVTSG 108 (343)
Q Consensus 35 ~~~i~l~~g~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~---i~~~~g 108 (343)
+++|||+.|.| + ++.++.+ .+++.+++.......|++..|.+++|+++++++.+.+ .++++++ |++|+|
T Consensus 47 ~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~g 121 (430)
T 2x5f_A 47 STTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTNA 121 (430)
T ss_dssp TCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEESH
T ss_pred CCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcCC
Confidence 46899999996 4 4445555 6666655543235689988899999999999998764 6778889 999999
Q ss_pred hHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh-cCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCC
Q 019298 109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-RHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGN 184 (343)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~n 184 (343)
+++++..++++++++||+|+++.|+|..+...++. .|.+++.++++.++ +.+|+++|++.+++ +++++++++|||
T Consensus 122 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~n 200 (430)
T 2x5f_A 122 LTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPNN 200 (430)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSCT
T ss_pred chHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCCC
Confidence 99999999999999999999999999999999999 99999999886543 67999999999876 788899999999
Q ss_pred CcccccCHHHHHHHHHHHhh-----cCcEEEEccCCCccccCCCCCCccc-ccCC-CCC---EEEEccCccccCCCCCcE
Q 019298 185 PCGNVYSYQHLQKLAETANK-----LKTLVIADEVYGHLVFGDKPFVPMG-VFGS-TVP---ILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 185 ptG~~~~~~~l~~l~~~~~~-----~~~~~i~D~ay~~~~~~~~~~~~~~-~~~~-~~~---~i~~~S~sK~~~~~G~r~ 254 (343)
|||.+++.+++++|+++|++ +|+++|+||+|..+.+++....++. .+.. .++ +++++|+||.|+++|+|+
T Consensus 201 ptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ri 280 (430)
T 2x5f_A 201 PTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRV 280 (430)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCC
T ss_pred CCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCe
Confidence 99999999999999999999 9999999999999988765444443 3432 457 899999999999999999
Q ss_pred EEEEEeCCCCCCCchHHHHHHhhhhc-----cccCcchHHHHHHHhccch-hhHHHHH----HHHHHHHHHHHHHHhhc-
Q 019298 255 GWFVTTDPCGMFRKPKVVERMKKYFD-----ILGDPATFIQVCIMYGCLS-TIMQIMI----HGNFLENFAGSCVPSYK- 323 (343)
Q Consensus 255 G~i~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~a~~~~~l~-~~~~~l~----~~~~~~~~~~~~~~~L~- 323 (343)
||+++.++ ++++++.++.... ..++++++.|.++ ..+|. +. .|.+ .+++++++++.+.+.|+
T Consensus 281 G~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~ 353 (430)
T 2x5f_A 281 GFMTFGTS-----DQTTKEVLEAKVKGLIRSNISSGPLPTQSAV-KHVLKNNK-QFDKEIEQNIQTLKERYEVTKEVVYA 353 (430)
T ss_dssp EEEEEBCC-----CHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH-HHHHHSCH-HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEecC-----CHHHHHHHHHHHhhhhhcccCCCChHHHHHH-HHHHccCh-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998210 1367787776543 3467888999888 67776 53 3433 78889999999999998
Q ss_pred ---CCCCceeeCCCCceEeeecC
Q 019298 324 ---LIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 324 ---~~~g~~~~~~~~g~~~~~~l 343 (343)
.+ |+.+..+++|+|+|+++
T Consensus 354 ~~~~~-g~~~~~~~~g~~~~~~~ 375 (430)
T 2x5f_A 354 DQYHS-HWQAYDFNSGYFMAIKV 375 (430)
T ss_dssp GGGTT-TEEECCCCBSSEEEEEE
T ss_pred hCCCC-CceeeCCCceEEEEeCC
Confidence 55 78887889999999863
No 56
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=3.9e-39 Score=294.24 Aligned_cols=281 Identities=18% Similarity=0.243 Sum_probs=237.1
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
..++|+|+.|++ .+++++.+.+++.+.+. ....|+. .+..++|+++++++ ++++++|++|+|+++++
T Consensus 31 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~--~~~~y~~-~~~~~lr~~la~~~------~~~~~~v~~~~g~t~a~ 97 (363)
T 3ffh_A 31 LTKITKLSSNEN----PLGTSKKVAAIQANSSV--ETEIYPD-GWASSLRKEVADFY------QLEEEELIFTAGVDELI 97 (363)
T ss_dssp CSCCEECSSCSC----TTCCCHHHHHHHHTCBS--CCCBC-----CHHHHHHHHHHH------TCCGGGEEEESSHHHHH
T ss_pred CCceEEccCCCC----CCCCCHHHHHHHHHHHH--HhhcCCC-cchHHHHHHHHHHh------CCChhhEEEeCCHHHHH
Confidence 568999999984 47789999999988764 3456754 68899999999999 46789999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++++++++||+|+++.|+|..+...++..|.+++.+++++ ++.+|+++++++++++++++++++|+||||.+++.+
T Consensus 98 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~ 175 (363)
T 3ffh_A 98 ELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELA 175 (363)
T ss_dssp HHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHH
Confidence 999999999999999999999999999999999999998864 577999999999988999999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++.++++.|++ |+++|+|++|.++.+ +............+++++++|+||.|+++|+|+||++++ +++++
T Consensus 176 ~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~~ 245 (363)
T 3ffh_A 176 DIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD--------KEIIR 245 (363)
T ss_dssp HHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC--------HHHHH
T ss_pred HHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC--------HHHHH
Confidence 99999999888 999999999999887 433333344445678999999999999999999999984 47888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++.... .++++++.+.++ .++|.+. ++++ .+++++++++.+.+.|++++|+.+. +..|+|+|+++
T Consensus 246 ~l~~~~~-~~~~~~~~~~~~-~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~ 312 (363)
T 3ffh_A 246 QLNIVRP-PFNTTSIGQKLA-IEAIKDQ-AFIGECRTSNANGIKQYEAFAKRFEKVKLY-PANGNFVLIDL 312 (363)
T ss_dssp HHHHTCC-SCCCBHHHHHHH-HHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHCTTCEEC-CCCSSEEEEEC
T ss_pred HHHHhCC-CCCCCHHHHHHH-HHHhcCH-HHHHHHHHHHHHHHHHHHHHHhhCCCceEC-CCCCeEEEEEC
Confidence 8887765 567888888888 6667654 4554 8889999999999999986688874 55677888864
No 57
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=5.8e-40 Score=303.40 Aligned_cols=310 Identities=21% Similarity=0.308 Sum_probs=251.8
Q ss_pred ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCH
Q 019298 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP 80 (343)
Q Consensus 3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~ 80 (343)
+|+|.....++ .++.+.... . ++++|||+.|.|+. ...+++.+.+++.+++... ....|++..|..
T Consensus 10 ~~~~~~~~~~~--~~~~~~~~~---~-----~~~~i~l~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~ 77 (397)
T 2zyj_A 10 FGKGAGRIQAS--TIRELLKLT---Q-----RPGILSFAGGLPAP--ELFPKEEAAEAAARILREKGEVALQYSPTEGYA 77 (397)
T ss_dssp SCGGGGGCCCC--HHHHHHHHH---T-----STTCEEESSCCCCG--GGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCH
T ss_pred hhhhhcccCch--HHHHHHhhc---c-----CCCceecCCCCCCc--hhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCH
Confidence 67888777766 555554421 1 45689999998762 2346788999998887642 235798878999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
++|+++++++ ++++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.+++ +
T Consensus 78 ~l~~~la~~~------g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~---~ 148 (397)
T 2zyj_A 78 PLRAFVAEWI------GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE---G 148 (397)
T ss_dssp HHHHHHHHHH------TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---E
T ss_pred HHHHHHHHHh------CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---C
Confidence 9999999999 367889999999999999999999999999999999999999999999999999988642 3
Q ss_pred CCHHHHHhhhcC-CceEE-EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC---C
Q 019298 161 VDLDDIESLADQ-NTVAL-VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST---V 235 (343)
Q Consensus 161 ~d~~~l~~~~~~-~~~~i-~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~---~ 235 (343)
+|+++|++.+++ +++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..++.. +
T Consensus 149 ~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (397)
T 2zyj_A 149 PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYP 228 (397)
T ss_dssp ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCC
T ss_pred CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCC
Confidence 899999998875 77877 468999999999999999999999999999999999999998876544455445444 6
Q ss_pred CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhH-HHHH-HHHHHH
Q 019298 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIM-QIMI-HGNFLE 312 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~-~~l~-~~~~~~ 312 (343)
++++++|+||.|+ +|+|+||++++ ++++++++.... ...+.+++.+.++ ..+|.+.. ++++ .+++++
T Consensus 229 ~~i~~~s~sK~~~-~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~ 298 (397)
T 2zyj_A 229 GVIYLGSFSKVLS-PGLRVAFAVAH--------PEALQKLVQAKQGADLHTPMLNQMLV-HELLKEGFSERLERVRRVYR 298 (397)
T ss_dssp CEEEEEESTTTTC-GGGCCEEEECC--------HHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHTTTHHHHHHHHHHHHH
T ss_pred eEEEEeccccccc-ccceeEEEecC--------HHHHHHHHHHHHhhcCCCCHHHHHHH-HHHHHhCCHHHHHHHHHHHH
Confidence 8899999999999 99999999985 368888876543 2345688888887 66776532 3444 788889
Q ss_pred HHHHHHHHhhcC-CC-CceeeCCCCceEeeecC
Q 019298 313 NFAGSCVPSYKL-IP-ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 313 ~~~~~~~~~L~~-~~-g~~~~~~~~g~~~~~~l 343 (343)
++++.+.+.|++ +| |+.+..|++|+|+|+++
T Consensus 299 ~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~ 331 (397)
T 2zyj_A 299 EKAQAMLHALDREVPKEVRYTRPKGGMFVWMEL 331 (397)
T ss_dssp HHHHHHHHHHHHHSCTTSEECCCSBSSEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCeEEccCCccEEEEEEc
Confidence 999999999987 67 68877889999999874
No 58
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=2.3e-39 Score=299.79 Aligned_cols=323 Identities=16% Similarity=0.226 Sum_probs=240.9
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCC
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPT 76 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~ 76 (343)
|+++.+..+.+++. ....+.........+ ..+.++|+|+.|+++ +++++.+.+++.++++.. ....|++.
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~ 74 (400)
T 3asa_A 1 MKRNPHFVSLTKNY-LFADLQKRVAQFRLE-NPQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPD 74 (400)
T ss_dssp CCCCHHHHTCCCCC-HHHHHHHHHHHHHHH-CTTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCT
T ss_pred CccchhhhccCCcc-cHHHHHHHHHHhhhh-cCCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCC
Confidence 45677777777652 233333333322211 236789999999853 667899999998887541 24579887
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCce-eEEeecCC
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE-VRHFDLLP 155 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~ 155 (343)
.|.+++|+++++++. +|. +++++|++|+|+++++..++. ++++||+|++++|+|..+...++..|.+ ++.+++++
T Consensus 75 ~g~~~lr~~la~~l~--~g~-~~~~~v~~~~G~~~al~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~ 150 (400)
T 3asa_A 75 FGLPALRQKLSEDFY--RGF-VDAKEIFISDGAKVDLFRLLS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQ 150 (400)
T ss_dssp TCCHHHHHHHHHTTS--TTS-SCGGGEEEESCHHHHHHHHHH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCG
T ss_pred CCCHHHHHHHHHHHH--cCC-CCHHHEEEccChHHHHHHHHH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccch
Confidence 899999999999974 343 678999999999999998765 4578999999999999999999999998 88888865
Q ss_pred CCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-C
Q 019298 156 DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-T 234 (343)
Q Consensus 156 ~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~ 234 (343)
++++..+++++ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..++. .
T Consensus 151 ~~~~~~~l~~~-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 225 (400)
T 3asa_A 151 ENAFFPEFPED-----THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDAR 225 (400)
T ss_dssp GGTTCCCCCTT-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGG
T ss_pred hcCcccChhhc-----cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCC
Confidence 44554554321 46889999999999999999999999999999999999999999998876543334444432 3
Q ss_pred CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-h-ccccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-F-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE 312 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~ 312 (343)
+++++++|+||.|+++|+|+||+++++......... ++.+... . ...++++.+.|.++ ..+|.+. .+-+.+++++
T Consensus 226 ~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~-~~~~~~~~~~ 302 (400)
T 3asa_A 226 FCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHF-VIQDWERFLSTTFNGASIPAQEAG-VAGLSIL-PQLEAIHYYR 302 (400)
T ss_dssp GTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCB-HHHHHHHHHHHHCCCCCHHHHHHH-HHHHHHT-TTCHHHHHHH
T ss_pred CceEEEecchhhcCCcchheeEEeeChhhccchhhh-HHHHHHHHhccCccCCChHHHHHH-HHHhCcH-HHHHHHHHHH
Confidence 578999999999999999999999864210000000 3333221 2 12346788888888 5666543 2223888999
Q ss_pred HHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 313 NFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 313 ~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
++++.+.+.|+++ |+.+..+++|+|+|++
T Consensus 303 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 331 (400)
T 3asa_A 303 ENSDLLRKALLAT-GFEVFGGEHAPYLWVK 331 (400)
T ss_dssp HHHHHHHHHHHHT-TCEEEECSSSSEEEEE
T ss_pred HHHHHHHHHHHHC-CCeeeCCCCceEEEEe
Confidence 9999999999988 8887778899999987
No 59
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.8e-39 Score=296.65 Aligned_cols=281 Identities=15% Similarity=0.152 Sum_probs=237.6
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
.+++|+|+.+++ .+++++.+++++.+++.. ...|++..+ .++|+++++++ ++++++|++|+|+++++
T Consensus 29 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a~ 95 (365)
T 3get_A 29 VKEVIKLASNEN----PFGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQVI 95 (365)
T ss_dssp CSCCEECSSCCC----TTCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHHH
T ss_pred CCceEEecCCCC----CCCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 467899999984 477899999999998873 567888666 99999999999 46789999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..++++++++||+|+++.|+|..+...++..|.+++.+++ .++++ +|+++++++++++++++++++|+||||.+++.+
T Consensus 96 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 173 (365)
T 3get_A 96 EFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDAS 173 (365)
T ss_dssp HHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHH
Confidence 9999999999999999999999999999999999999987 34567 999999999998899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCcccc--CCCC-CCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVF--GDKP-FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~--~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 270 (343)
++.+++++| ++|+++|+|++|..+.+ .+.. ..........+++++++|+||.|+++|+|+||++++ ++
T Consensus 174 ~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~ 244 (365)
T 3get_A 174 EATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN--------AN 244 (365)
T ss_dssp HHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC--------HH
T ss_pred HHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC--------HH
Confidence 999999999 57999999999998875 4332 222222344568899999999999999999999984 47
Q ss_pred HHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 271 VVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 271 ~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++.++.... .++++++.+.++ ..+|.+. ++++ .+++++++++.+.+.|+++ |+.+. +..|+|+|+++
T Consensus 245 ~~~~~~~~~~-~~~~~~~~~~~~-~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~~~~~ 313 (365)
T 3get_A 245 IISAFYKLRA-PFNVSNLALKAA-VAAMDDD-EFTEKTLENNFSQMELYKEFAKKH-NIKII-DSYTNFITYFF 313 (365)
T ss_dssp HHHHHHHHSC-TTCSCHHHHHHH-HHHHTCH-HHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSEEEEEC
T ss_pred HHHHHHHhcC-CCCcCHHHHHHH-HHHhCCH-HHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEEC
Confidence 8888887765 356888888888 6777764 4444 8899999999999999988 88874 45567788864
No 60
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=1.9e-40 Score=306.24 Aligned_cols=321 Identities=16% Similarity=0.141 Sum_probs=249.8
Q ss_pred CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298 5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 83 (343)
++..+.+++ ++..+...+.+.. +++.+||+.|.+.. ....++++.+.+++.+++.......|++..|.+++|
T Consensus 3 ~~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr 75 (394)
T 2ay1_A 3 GNLKPQAPD--KILALMGEFRADP-----RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQ 75 (394)
T ss_dssp GGCCCCCCC--SHHHHHHHHHHCC-----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHH
T ss_pred ccCccCCCc--cHHHHHHHHHhCC-----CccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHH
Confidence 456677777 7888877776653 56789999999531 122467899999999887654566898888999999
Q ss_pred HHHHHHHhhhCCCCCCCCcEEE--ecChHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298 84 RAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (343)
Q Consensus 84 ~~ia~~~~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (343)
+++++++... ++++++|++ |+|+++++..+++.+.. +||+|+++.|+|..+...++..|.+++.+++.+++++
T Consensus 76 ~~la~~~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 152 (394)
T 2ay1_A 76 KAMGELILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETR 152 (394)
T ss_dssp HHHHHHHHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTT
T ss_pred HHHHHHHhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCC
Confidence 9999998431 236789999 99999999999988754 9999999999999999999999999999988655667
Q ss_pred CCCHHHHHhhhcCC---ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCcccccC-CC
Q 019298 160 EVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFG-ST 234 (343)
Q Consensus 160 ~~d~~~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~~~~~~-~~ 234 (343)
.+|++++++.+++. +.++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+. ..
T Consensus 153 ~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 232 (394)
T 2ay1_A 153 GVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRI 232 (394)
T ss_dssp EECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcC
Confidence 89999999988653 56677799999999999999999999999999999999999999887531 111222222 13
Q ss_pred CCEEEEccCccccCCCCCcEEEEEE--eCCCCCCCchHH----HHHHhhhh-ccccCcchHHHHHHHhccchhh------
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVT--TDPCGMFRKPKV----VERMKKYF-DILGDPATFIQVCIMYGCLSTI------ 301 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~----~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~------ 301 (343)
+++++++|+||.|+++|+|+||+++ ++ +++ .+.++... ..+..++++.+.++ ..+|++.
T Consensus 233 ~~~i~~~s~sK~~~~~G~riG~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~l~~~~ 304 (394)
T 2ay1_A 233 PEVLIAASCSKNFGIYRERTGCLLALCAD-------AATRELAQGAMAFLNRQTYSFPPFHGAKIV-STVLTTPELRADW 304 (394)
T ss_dssp SSEEEEEECTTTTTCGGGCEEEEEEECSS-------HHHHHHHHHHHHHHHHTTTSSCCCHHHHHH-HHHHHSHHHHHHH
T ss_pred CCEEEEEeccCCCcCcCCccceEEEEeCC-------HHHHHHHHHHHHHHHhhhcCCCChHHHHHH-HHHhcChHHHHHH
Confidence 4789999999999999999999987 33 233 33343222 22445588888877 6666653
Q ss_pred HHHHH-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298 302 MQIMI-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 302 ~~~l~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l 343 (343)
.++++ .+++++++++.+.+.|++++ ++.+..|++|+|+|+++
T Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~ 350 (394)
T 2ay1_A 305 MAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGA 350 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCC
Confidence 23343 88889999999999998763 47766788999999864
No 61
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=2.1e-39 Score=295.01 Aligned_cols=282 Identities=16% Similarity=0.258 Sum_probs=241.8
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
.++++|+|+.|+ +.+++++.+++++.+++.+ ...|+. .+.+++|+++++++ ++++++|++|+|++++
T Consensus 14 ~~~~~i~l~~~~----~~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~~~a 80 (354)
T 3ly1_A 14 STDNPIRINFNE----NPLGMSPKAQAAARDAVVK--ANRYAK-NEILMLGNKLAAHH------QVEAPSILLTAGSSEG 80 (354)
T ss_dssp CSSSCEECSSCC----CSSCCCHHHHHHHHHTGGG--TTSCCH-HHHHHHHHHHHHHT------TSCGGGEEEESHHHHH
T ss_pred CCCceEEccCCC----CCCCCCHHHHHHHHHHHhh--CcCCCC-CchHHHHHHHHHHh------CCChHHEEEeCChHHH
Confidence 377899999998 3477899999999998874 457854 57899999999998 4678999999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCceEEEEeCCCCCccccc
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIINPGNPCGNVY 190 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~~~~p~nptG~~~ 190 (343)
+..++++++++||+|+++.|+|..+...++..|.+++.++.++ ++.+|+++|+++++ ++++++++++|+||||.++
T Consensus 81 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~ 158 (354)
T 3ly1_A 81 IRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTIT 158 (354)
T ss_dssp HHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCC
T ss_pred HHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCc
Confidence 9999999999999999999999999999999999999998763 47899999999998 7899999999999999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC-CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~-~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~ 269 (343)
+.+++.+|+++| ++|+++|+|++|+.+.+++.....+...+.. +++++++|+||.|+++|+|+||++++ +
T Consensus 159 ~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~ 229 (354)
T 3ly1_A 159 PADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH--------P 229 (354)
T ss_dssp CHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC--------H
T ss_pred CHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC--------H
Confidence 999999999999 8999999999999988776544444334444 78999999999999999999999984 4
Q ss_pred HHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 270 KVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++++..... ++++++.+.++ .++|.+. .+++ .+++++++++.+.+.|+++ |+.+. +..|+|+|+++
T Consensus 230 ~~~~~~~~~~~~-~~~~~~~~~a~-~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~ 299 (354)
T 3ly1_A 230 TVIALMGRYVAG-EKINFSGVDAA-LASMNDS-AFITYSKKSNDVSRQILLKALEDL-KLPYL-PSEGNFVFHQL 299 (354)
T ss_dssp HHHHHHGGGTTC-SCCCHHHHHHH-HHHTTCH-HHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEEC
T ss_pred HHHHHHHHhcCC-CCCCHHHHHHH-HHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCCceEEEEEC
Confidence 788888877653 67888888888 6777765 4444 8899999999999999988 78764 55678899864
No 62
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=1.2e-38 Score=291.41 Aligned_cols=280 Identities=18% Similarity=0.288 Sum_probs=240.8
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~g~~~a 112 (343)
++++|+|+.|+ +.+++++.+.+++.+++.......|++ .+..++|+++++++ ++ ++++|++|+|++++
T Consensus 29 ~~~~i~l~~~~----~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~a 97 (367)
T 3euc_A 29 SHGLVKLDAME----NPYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM------QVPAGMEVLLGNGSDEI 97 (367)
T ss_dssp CTTCEECCSSC----CCCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH------TCCTTCEEEEEEHHHHH
T ss_pred CCCeeEccCCC----CCCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh------CCCCcceEEEcCCHHHH
Confidence 57889999998 447789999999999887544568877 58899999999998 34 67899999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccC
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~ 191 (343)
+..++++++++||+|+++.|+|..+...++..|.+++.+++++ ++.+|++++++++++ +++++++++|+||||.+++
T Consensus 98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 175 (367)
T 3euc_A 98 ISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFD 175 (367)
T ss_dssp HHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999998864 567999999999987 8999999999999999999
Q ss_pred HHHHHHHHHHHhhc--CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298 192 YQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (343)
Q Consensus 192 ~~~l~~l~~~~~~~--~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~ 269 (343)
.+++++|+++|++| |+++|+|++|..+...+. ...+...+++++++|+||. +++|+|+||++++ +
T Consensus 176 ~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~----~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~--------~ 242 (367)
T 3euc_A 176 AADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESW----MSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGD--------P 242 (367)
T ss_dssp HHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCS----GGGGGTCTTEEEEEECCCT-TSCSCCEEEEEEC--------H
T ss_pred HHHHHHHHHhhhhcCCCcEEEEeCcchhhcccch----HHHHhhCCCEEEEecchhh-cccccCceeeeeC--------H
Confidence 99999999999999 999999999998763321 2233445688999999999 9999999999984 4
Q ss_pred HHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 270 KVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++++.... .++.+++.+.++ ..+|+. .++++ .+++++++++.+.+.|+++||+.+ .+.+|+|+|+++
T Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~a~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~~~~~~~~~~ 313 (367)
T 3euc_A 243 QWLEQLDKVRP-PYNVNVLTEATA-LFALEH-VAVLDEQAAQLRAERSRVAEGMAAHGGVTV-FPSAANFLLARV 313 (367)
T ss_dssp HHHHHHGGGCC-SSCCCHHHHHHH-HHHHTT-HHHHHHHHHHHHHHHHHHHHHHHTSTTCEE-CCCSSSEEEEEC
T ss_pred HHHHHHHHhCC-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEE-CCCCCeEEEEEC
Confidence 78888877665 456888888888 677776 45554 889999999999999999989985 677888999864
No 63
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=3.9e-38 Score=287.85 Aligned_cols=279 Identities=19% Similarity=0.263 Sum_probs=231.0
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
++++|||+.|.+ .+++++.+.+++.+++.. ...|++ .+..++|+++++++ ++++++|++|+|+++++
T Consensus 23 ~~~~idl~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~al 89 (364)
T 1lc5_A 23 PDQLLDFSANIN----PLGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETESI 89 (364)
T ss_dssp GGGSEECSSCCC----TTCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHHH
T ss_pred ccceEEeccccC----CCCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHHH
Confidence 567899999984 356789999999998764 457876 58899999999999 46788999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..+++++ +||+|+++.|+|..+...++..|.+++.++.+.++++.+ ++++.+.++++++++++++|+||||.+++.+
T Consensus 90 ~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~ 166 (364)
T 1lc5_A 90 FTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERP 166 (364)
T ss_dssp HHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHH
Confidence 9999998 679999999999999999999999999998865444444 5666666666788999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE-EeCCCCCCCchHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV-TTDPCGMFRKPKVV 272 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~-~~~~~~~~~~~~~~ 272 (343)
++++|+++|++||+++|+||+|..+.+++... +..++..+++++++|+||.|+++|+|+||++ ++ ++++
T Consensus 167 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~~ 236 (364)
T 1lc5_A 167 LLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD--------DAAM 236 (364)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC--------HHHH
T ss_pred HHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECC--------HHHH
Confidence 99999999999999999999999987753221 2223445688999999999999999999999 63 4788
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
++++.... .++++++.+.++ ..+|+. ..+++ .+++++++++.+.+.|+++||+.+. +.+|+|+|++
T Consensus 237 ~~l~~~~~-~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~g~~~~~~ 303 (364)
T 1lc5_A 237 ARMRRQQM-PWSVNALAALAG-EVALQD-SAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRANYLLLR 303 (364)
T ss_dssp HHHHHHSC-TTCSCHHHHHHH-HHGGGC-HHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSSEEEEE
T ss_pred HHHHHhCC-CCCCCHHHHHHH-HHHHhC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC-CCCCeEEEEE
Confidence 88877654 557788888888 777776 34555 8888999999999999988888874 5567788875
No 64
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=1.7e-38 Score=289.49 Aligned_cols=272 Identities=20% Similarity=0.282 Sum_probs=224.5
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
.++|+|+.|++. +++++.+ ++ ....+|++. +..++|+++++++ ++++++|++|+|+++++.
T Consensus 29 ~~~i~l~~~~~~----~~~~~~v------a~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~ 89 (356)
T 1fg7_A 29 NGDVWLNANEYP----TAVEFQL------TQ--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE 89 (356)
T ss_dssp TCSEECSSCCCS----SCCCCCC------CC--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred CceEEeeCCCCC----CCCCHhH------hh--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence 468999999943 5555555 12 235689875 5899999999999 567899999999999999
Q ss_pred HHHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 115 VAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 115 ~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
.++++++++| |+|+++.|+|..+...++..|.+++.++++ +++.+|+++++++++ +++++++++||||||.+++.+
T Consensus 90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~ 166 (356)
T 1fg7_A 90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ 166 (356)
T ss_dssp HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999 999999999999999999999999988875 456799999999887 889999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc-CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
++++|+++|+ +|+++|+||+|.++..+ .++..+ +..+++++++|+||.|+++|+|+||++++ ++++
T Consensus 167 ~l~~l~~~~~-~~~~li~De~~~~~~~~----~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~ 233 (356)
T 1fg7_A 167 DFRTLLELTR-GKAIVVADEAYIEFCPQ----ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN--------EEVI 233 (356)
T ss_dssp HHHHHHHHHT-TTCEEEEECTTGGGSGG----GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC--------HHHH
T ss_pred HHHHHHHhCC-CCCEEEEEccchhhcCC----CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC--------HHHH
Confidence 9999999999 99999999999987621 122222 44568999999999999999999999984 4788
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhhH-HHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIM-QIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~-~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+.++.... .+++++++|.++ .++|.+.. ++++ .+++++++++.+.+.|++++++....|.+|+|+|+++
T Consensus 234 ~~l~~~~~-~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 304 (356)
T 1fg7_A 234 NLLMKVIA-PYPLSTPVADIA-AQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARF 304 (356)
T ss_dssp HHHHHHSC-SSCSCHHHHHHH-HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEE
T ss_pred HHHHHhcC-CCCCCHHHHHHH-HHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEEC
Confidence 88887655 347888888888 67776532 2244 8889999999999999988665444677899999863
No 65
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-37 Score=284.15 Aligned_cols=277 Identities=17% Similarity=0.280 Sum_probs=232.2
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
++++|||+.|.+ .+++++.+.+++.+++.. ...|+. .+..++|+++++++ ++++++|++|+|+++++
T Consensus 25 ~~~~idl~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~t~al 91 (361)
T 3ftb_A 25 GRELLDYSSNIN----PLGIPKSFLNNIDEGIKN--LGVYPD-VNYRRLNKSIENYL------KLKDIGIVLGNGASEII 91 (361)
T ss_dssp ---CEETTCCCC----TTCSCHHHHTTHHHHHHG--GGSCCC-TTCHHHHHHHHHHH------TCCSCEEEEESSHHHHH
T ss_pred CCCEEEecCCCC----CCCCCHHHHHHHHHHHHH--hcCCCC-ccHHHHHHHHHHHh------CCCcceEEEcCCHHHHH
Confidence 678999999984 367889999999998875 356754 68899999999999 56789999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..+++.+ |+|+++.|+|..+...++..|.+++.++++++. .++++++++++++ ++++++++|+||||.+++.+
T Consensus 92 ~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~ 164 (361)
T 3ftb_A 92 ELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKE 164 (361)
T ss_dssp HHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHH
T ss_pred HHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHH
Confidence 9999887 899999999999999999999999999987543 4677999999987 99999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++++|+++|++||+++|+||+|.++.++ ............+++++++|+||.++++|+|+||+++. ++++++
T Consensus 165 ~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~-------~~~~~~ 236 (361)
T 3ftb_A 165 KFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITN-------NKEIAA 236 (361)
T ss_dssp HHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEES-------CHHHHH
T ss_pred HHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeC-------CHHHHH
Confidence 9999999999999999999999998876 33333333445578999999999999999999999843 257888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCce-eeCCCCceEeeec
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELI-NFKSTGSSLKYLD 342 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~~~~~~ 342 (343)
.++.... .++++++.+.++ .++|++ .++++ .+++++++++.+.+.|+++|++. +..+ .|.|+|++
T Consensus 237 ~~~~~~~-~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~ 303 (361)
T 3ftb_A 237 KIKAKQN-PWNINCFAEMAA-INCLKD-TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSP-HANFVLCR 303 (361)
T ss_dssp HHHTTSC-TTCSCHHHHHHH-HHTSSC-HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECC-SSSEEEEE
T ss_pred HHHhhCC-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCC-CCeEEEEE
Confidence 8887665 457888888888 777776 45555 88999999999999999998888 6444 55677765
No 66
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=6.8e-39 Score=297.92 Aligned_cols=321 Identities=20% Similarity=0.224 Sum_probs=224.7
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCC
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPT 76 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~ 76 (343)
|.+|.++.+.... ..+..++..+.+... ++++|+|++|.|.. ...+.+.+.+++++.+.+. ....|+++
T Consensus 2 m~~s~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~i~l~~g~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 74 (417)
T 3g7q_A 2 MTFSLFGDKFTRH-SGITRLMEDLNDGLR----TPGAIMLGGGNPAH--IPAMQDYFQTLLTDMVESGKAADALCNYDGP 74 (417)
T ss_dssp ---------------CHHHHHHHHHC---------CCEECSCCCCCC--CHHHHHHHHHHHHHHHHHTHHHHHHHSTTCT
T ss_pred Cchhhhhhhhhcc-ccHHHHHHHHHhhcc----CCCceEecCcCCCC--CChHHHHHHHHHHHHhhCCcccceeeccCCC
Confidence 6788888777653 356666666655432 57899999999762 1112367777777776543 12479998
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC-----eEEEe-CCCCcchHHHHHhc----Cc
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA-----NILLP-RPGFPIYELSAAFR----HI 146 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd-----~vl~~-~p~~~~~~~~~~~~----g~ 146 (343)
.|.++||+++++++.+.+|.++++++|++|+|+++++..++++++++|| +|+++ .|+|..+...+... +.
T Consensus 75 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~ 154 (417)
T 3g7q_A 75 QGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSA 154 (417)
T ss_dssp TSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEEC
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccc
Confidence 9999999999999998889899999999999999999999999999987 89997 99999887665322 22
Q ss_pred eeEEeecCCC-CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298 147 EVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 147 ~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~ 225 (343)
.....++..+ .++.+|+++++ ++++++++++++||||||.+++.+++++|+++|++||+++|+||+|+.+..+. ..
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~ 231 (417)
T 3g7q_A 155 RPNIELLPEGQFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI-IF 231 (417)
T ss_dssp CCEEEEEGGGEEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BC
T ss_pred cCcccccCCcccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc-cc
Confidence 2222222221 24668999888 66788999999999999999999999999999999999999999998643211 11
Q ss_pred CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQI 304 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~ 304 (343)
.... ....+++++++|||| ++++|+|+||++++ ++++++++.... ...+++++.+.++ .+++.+. .+
T Consensus 232 ~~~~-~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~-~~ 299 (417)
T 3g7q_A 232 SEAR-PLWNPNIILCMSLSK-LGLPGSRCGIIIAN--------DKTITAIANMNGIISLAPGGMGPAMM-CEMIKRN-DL 299 (417)
T ss_dssp SCCC-CCCCTTEEEEEESGG-GTCTTSCCEEEECC--------HHHHHHHHHHHHHHCCCCCSHHHHHH-HHHHHTT-CH
T ss_pred cccc-cCCCCCEEEEEechh-ccCCCcceEEEEeC--------HHHHHHHHHhhcceeeCCCcHHHHHH-HHHHcCc-ch
Confidence 1110 122468999999999 69999999999884 478888877654 3456788888888 5555542 22
Q ss_pred H----H-HHHHHHHHHHHHHHhhcC-CC--CceeeCCCCceEeeecC
Q 019298 305 M----I-HGNFLENFAGSCVPSYKL-IP--ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 305 l----~-~~~~~~~~~~~~~~~L~~-~~--g~~~~~~~~g~~~~~~l 343 (343)
. + .+++++++++.+.+.|.+ ++ |+.+..|++|+|+|+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~ 346 (417)
T 3g7q_A 300 LRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWF 346 (417)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEc
Confidence 2 2 566788888888888876 55 46777899999999864
No 67
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=1e-38 Score=299.23 Aligned_cols=323 Identities=21% Similarity=0.247 Sum_probs=247.2
Q ss_pred CcccCccccCcCccccHHHHHHHHHhhcccccccccee-EeccCCCCCCCCCCCcHHHHHHHHHHHhc-------CC---
Q 019298 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVI-SLAMGDPTVHSCFHTTHVATEAVAEALLS-------EK--- 69 (343)
Q Consensus 1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~--- 69 (343)
|++|+++.++.+.. ++..++....+... .+++| +|+.|.|.. .....+.+.+++++.+.+ ..
T Consensus 2 ~~~s~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~i~~l~~g~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (444)
T 3if2_A 2 MKFSKFGQKFTQPT-GISQLMDDLGDALK----SDQPVNMLGGGNPAK--IDAVNELFLETYKALGNDNDTGKANSSAII 74 (444)
T ss_dssp CCCCHHHHHHHSCC-HHHHHHHHHHHHHH----SSSCCEECSCCCCCC--CHHHHHHHHHHHHHHHSCSCTTCCCCHHHH
T ss_pred CCcchhhhhccCch-hHHHHHHHHHhhhc----CchhhhccCCCCCCc--ccchHHHHHHHHHHHHhccccccccchhhh
Confidence 88999999988753 57777776655543 46889 999999762 111225667777776654 21
Q ss_pred -CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC--------------eEEEe-CCC
Q 019298 70 -FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA--------------NILLP-RPG 133 (343)
Q Consensus 70 -~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd--------------~vl~~-~p~ 133 (343)
...|++..|.+++|+++++++.+.+|.++++++|++|+|+++++..++++++++|| +|+++ .|+
T Consensus 75 ~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~ 154 (444)
T 3if2_A 75 SMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPE 154 (444)
T ss_dssp HHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSC
T ss_pred hhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCC
Confidence 24799989999999999999999899999999999999999999999999998887 78776 999
Q ss_pred CcchHHH------HHhcCceeEEeecCCCC---CCCCCHHHHHhh---hcCCceEEEEeCCCCCcccccCHHHHHHHHHH
Q 019298 134 FPIYELS------AAFRHIEVRHFDLLPDK---GWEVDLDDIESL---ADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201 (343)
Q Consensus 134 ~~~~~~~------~~~~g~~~~~~~~~~~~---~~~~d~~~l~~~---~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 201 (343)
|..+... ....|..++.++.+.++ ++.+|+++|+++ ++++++++++++||||||.+++.+++++|+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~ 234 (444)
T 3if2_A 155 YIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEI 234 (444)
T ss_dssp CGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred ccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHH
Confidence 9988763 34456777777765422 367999999998 67788999999999999999999999999999
Q ss_pred HhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-
Q 019298 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD- 280 (343)
Q Consensus 202 ~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~- 280 (343)
|++||+++|+||+|+.+.... ...... ....+++++++|+||. +++|+|+||++++ +++++.++....
T Consensus 235 a~~~~~~li~De~~~~~~~~~-~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~--------~~l~~~~~~~~~~ 303 (444)
T 3if2_A 235 AKRYDIPLIIDNAYGMPFPNI-IYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVAD--------AKVIEAVSAMNAV 303 (444)
T ss_dssp HHHTTCCEEEECTTCTTTTCC-BCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECC--------HHHHHHHHHHHHH
T ss_pred HHHCCCEEEEECCCCCccccc-cccccc-ccCCCCEEEEechhhc-cCCCCceEEEEEC--------HHHHHHHHHHHHh
Confidence 999999999999998643111 111110 1224678999999997 9999999999884 478888877654
Q ss_pred cccCcchHHHHHHHhccchhhHHHH----H-HHHHHHHHHHHHHHhhcC-CC--CceeeCCCCceEeeecC
Q 019298 281 ILGDPATFIQVCIMYGCLSTIMQIM----I-HGNFLENFAGSCVPSYKL-IP--ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 281 ~~~~~~~~~~~a~~~~~l~~~~~~l----~-~~~~~~~~~~~~~~~L~~-~~--g~~~~~~~~g~~~~~~l 343 (343)
...+++++.|.++ .+++... ++. + .++.++++++.+.+.|.+ ++ ++.+..|++|+|+|+++
T Consensus 304 ~~~~~~~~~~~a~-~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~ 372 (444)
T 3if2_A 304 VNLAPTRFGAAIA-TPLVAND-RIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWF 372 (444)
T ss_dssp HHSSCCCHHHHHH-HHHHHTS-HHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEE
T ss_pred ccCCCChHHHHHH-HHHHHcC-chhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEc
Confidence 3456788888887 5555542 222 2 566778888888877765 55 45677889999999863
No 68
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.4e-39 Score=299.74 Aligned_cols=290 Identities=15% Similarity=0.129 Sum_probs=230.2
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHH--HHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAV--AEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
....+||+.|.|+.. .++.++.+.+++ .+++... ...+|++..|.++||+++++++ ++++++|++|+|+
T Consensus 32 ~~~~i~~~~G~p~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~ 104 (427)
T 3ppl_A 32 KNLKLDLTRGKPSSE-QLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDAS 104 (427)
T ss_dssp TCCCEECCCCSCCHH-HHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSC
T ss_pred CCceEecCCCCCChH-HCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCc
Confidence 567899999997621 122233566655 4444432 3578999899999999999999 5788999999999
Q ss_pred HHHH--HHHHHHhcC--C----------CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-CCc
Q 019298 110 TQAI--DVAMALLSR--P----------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNT 174 (343)
Q Consensus 110 ~~al--~~~~~~l~~--~----------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~ 174 (343)
++++ ..+++++++ + ||+|++++|+|..+...++..|.+++.++++.+ ++|+++|+++++ .++
T Consensus 105 ~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~ 181 (427)
T 3ppl_A 105 SLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQV 181 (427)
T ss_dssp HHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTTE
T ss_pred HHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCCC
Confidence 9999 588888876 6 899999999999999999999999999998653 499999999985 567
Q ss_pred eEEEEe-CCCCCcccccCHHHHHHHHHHH-hhcCcEEEEccCCCccccCCCCCC--ccccc----CCCCCEEEEccCccc
Q 019298 175 VALVII-NPGNPCGNVYSYQHLQKLAETA-NKLKTLVIADEVYGHLVFGDKPFV--PMGVF----GSTVPILTLGSLSKR 246 (343)
Q Consensus 175 ~~i~~~-~p~nptG~~~~~~~l~~l~~~~-~~~~~~~i~D~ay~~~~~~~~~~~--~~~~~----~~~~~~i~~~S~sK~ 246 (343)
++++++ +||||||.+++.+++++|+++| ++||+++|+||+|..+.|++.... ++..+ +..+++++++||||+
T Consensus 182 ~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 261 (427)
T 3ppl_A 182 KGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI 261 (427)
T ss_dssp EEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT
T ss_pred eEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc
Confidence 777654 7799999999999999999999 999999999999999887764322 33322 245689999999999
Q ss_pred cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh---HHHHH-HHHHHHHHHHHHHHh
Q 019298 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI---MQIMI-HGNFLENFAGSCVPS 321 (343)
Q Consensus 247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~---~~~l~-~~~~~~~~~~~~~~~ 321 (343)
+++|+|+||++++ +++++.++.... ...+++.+.|.++ ..++.+. .++++ .++.++++++.+.+.
T Consensus 262 -~~~G~r~G~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (427)
T 3ppl_A 262 -TLAGAGVSFFLTS--------AENRKWYTGHAGIRGIGPNKVNQLAH-ARYFGDAEGVRAVMRKHAASLAPKFNKVLEI 331 (427)
T ss_dssp -SCTTSSCEEEECC--------HHHHHHHHHHHHHHCSCCCHHHHHHH-HHHHCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCcCccEEEEEcC--------HHHHHHHHHHhhcccCCCCHHHHHHH-HHHHhChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999985 468888877654 3567888999888 6666652 23333 778888888888777
Q ss_pred hcC----CCCceeeCCCCceEeeecC
Q 019298 322 YKL----IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 322 L~~----~~g~~~~~~~~g~~~~~~l 343 (343)
|.+ ++++.+..|++|+|+|+++
T Consensus 332 L~~~l~~~~~~~~~~p~~g~~~~~~~ 357 (427)
T 3ppl_A 332 LDSRLAEYGVAQWTVPAGGYFISLDV 357 (427)
T ss_dssp HHHHHGGGTCCEECCCSBSSCEEEEC
T ss_pred HHHhcCCCCceEEeCCCccEEEEEEC
Confidence 754 3357777899999999875
No 69
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=8.8e-42 Score=315.12 Aligned_cols=293 Identities=17% Similarity=0.288 Sum_probs=246.5
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~ 115 (343)
++++|+.|+++ +++++.+.+++.+++... ...|++. ..++|+++++++.+.+|..+++++|++|+|+++++..
T Consensus 32 ~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~ 104 (392)
T 3b1d_A 32 QLLPAWIADMD----FEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISI 104 (392)
Confidence 78999999953 778899999999887643 4578764 7899999999998877877889999999999999999
Q ss_pred HHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC-CCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCHH
Q 019298 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 116 ~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~~ 193 (343)
+++++.++||+|+++.|+|..+...++..|.+++.+++++++ +|.+|++++++.++ .+++++++++|+||||.+++.+
T Consensus 105 ~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~ 184 (392)
T 3b1d_A 105 AIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWERE 184 (392)
Confidence 999999999999999999999999999899999888875333 46789999999887 5788889999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++++++|+||.|+++|+|+||++++++ ++
T Consensus 185 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~~ 257 (392)
T 3b1d_A 185 VLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP-------TL 257 (392)
Confidence 9999999999999999999999999887655445544443 56889999999999999999999998642 36
Q ss_pred HHHHhhhhccc--cCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298 272 VERMKKYFDIL--GDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~~~--~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l 343 (343)
++.++...... .++++++|.++ .++|.+...+++ .++.++++++.+.+.|++ +|++.+..+++++++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~ 332 (392)
T 3b1d_A 258 CAQFKHQQLVNNHHEVSSLGYIAT-ETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDF 332 (392)
Confidence 77776664432 35678888877 666665445555 888899999999999988 7888887899999999864
No 70
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.4e-38 Score=296.64 Aligned_cols=288 Identities=17% Similarity=0.146 Sum_probs=227.5
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHH--hcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEAL--LSE-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
.+|+|+.|.|+.. .+++++.+++++.+.+ ... ...+|+++.|.++||+++++++ ++++++|++|+|++++
T Consensus 33 ~~i~l~~g~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a 105 (422)
T 3d6k_A 33 LSLDLTRGKPSAE-QLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN 105 (422)
T ss_dssp CCEECCCCSCCHH-HHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred CeEeCCCCCCChh-hCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence 4799999996411 1556667777776552 122 3568999999999999999999 5788999999999998
Q ss_pred H--HHHHHHhcCC------------CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEE
Q 019298 113 I--DVAMALLSRP------------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL 177 (343)
Q Consensus 113 l--~~~~~~l~~~------------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i 177 (343)
+ ..+++.+..+ +|+|++++|+|..+...++..|.+++.++++.+ ++|+++|++.+++ +++++
T Consensus 106 l~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v 182 (422)
T 3d6k_A 106 IMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKGM 182 (422)
T ss_dssp HHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEEE
T ss_pred HHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeEE
Confidence 7 6777777655 357999999999999999999999999998652 3899999999875 67887
Q ss_pred E-EeCCCCCcccccCHHHHHHHHHHHh-hcCcEEEEccCCCc--cccCCCCCCcccc----cCCCCCEEEEccCccccCC
Q 019298 178 V-IINPGNPCGNVYSYQHLQKLAETAN-KLKTLVIADEVYGH--LVFGDKPFVPMGV----FGSTVPILTLGSLSKRWIV 249 (343)
Q Consensus 178 ~-~~~p~nptG~~~~~~~l~~l~~~~~-~~~~~~i~D~ay~~--~~~~~~~~~~~~~----~~~~~~~i~~~S~sK~~~~ 249 (343)
+ +++||||||.+++.+++++|+++|+ ++|+++|+||+|.. +.+++....++.. .+..+++++++||||+ ++
T Consensus 183 ~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~ 261 (422)
T 3d6k_A 183 WTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH 261 (422)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC
T ss_pred EEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC
Confidence 7 6899999999999999999999999 99999999999986 4433323333321 2345689999999999 89
Q ss_pred CCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh---HHHHH-HHHHHHHHHHHHHHhhcC
Q 019298 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI---MQIMI-HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 250 ~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~---~~~l~-~~~~~~~~~~~~~~~L~~ 324 (343)
+|+|+||++++ +++++.+..... ..++++.++|.++ ..+|.+. .++++ .++.++++++.+.+.|.+
T Consensus 262 ~GlriG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 332 (422)
T 3d6k_A 262 AGSGVSFFASS--------KENIEWYASHANVRGIGPNKLNQLAH-AQFFGDVAGLKAHMLKHAASLAPKFERVLEILDS 332 (422)
T ss_dssp TTSSCEEEECC--------HHHHHHHHHHHHHHCSCCCHHHHHHH-HHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEEeC--------HHHHHHHHHHHHhhcCCCCHHHHHHH-HHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999985 478888887654 3467889999888 6777652 23444 778888888888877764
Q ss_pred ----CCCceeeCCCCceEeeecC
Q 019298 325 ----IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 325 ----~~g~~~~~~~~g~~~~~~l 343 (343)
++++.+..|++|+|+|+++
T Consensus 333 ~l~~~~~~~~~~p~~g~~~~~~~ 355 (422)
T 3d6k_A 333 RLSEYGVAKWTSPTGGYFISVDV 355 (422)
T ss_dssp HHGGGTCEEECCCSBSSCEEEEE
T ss_pred hcCcCCceEEeCCCcceEEEEEC
Confidence 3346667899999999864
No 71
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=7.8e-37 Score=279.75 Aligned_cols=281 Identities=15% Similarity=0.212 Sum_probs=231.9
Q ss_pred eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
.|||+.|++ .+++++.+.+++.+++... ....|++..+ .++|+++++++.+.+|.++++++|++|+|+++++.
T Consensus 32 ~idl~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~ 106 (369)
T 3cq5_A 32 DIRLNTNEN----PYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ 106 (369)
T ss_dssp SEECSSCCC----CSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred ceeccCCCC----CCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence 499999984 3678899999999988642 2467887655 89999999999988888888999999999999999
Q ss_pred HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHH
Q 019298 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~ 193 (343)
.++++++++||+|++++|+|..+...++..|.+++.++.+ +++.+|++++++++++ +++++++++|+||||.+++.+
T Consensus 107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~ 184 (369)
T 3cq5_A 107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD 184 (369)
T ss_dssp HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999998864 4567999999999877 789999999999999999988
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC-CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV-PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~-~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
++.++++.| ++++|+||+|+.+.++ .......+..+ ++++++|+||.|+++|+|+||+++++ +++
T Consensus 185 ~l~~l~~~~---~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 250 (369)
T 3cq5_A 185 DVERIINVA---PGIVIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AFI 250 (369)
T ss_dssp HHHHHHHHC---SSEEEEECTTGGGCCS---CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HHH
T ss_pred HHHHHHHhC---CCEEEEECCchhhcCC---cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HHH
Confidence 887777754 5999999999998753 11122224445 88999999999999999999999953 688
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++++.... .++++++.+.++ ..+|.+ .++++ .+++++++++.+.+.|++. |+.+. +.+|+|+|+++
T Consensus 251 ~~l~~~~~-~~~~~~~~~~a~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~ 317 (369)
T 3cq5_A 251 DAVMLVRL-PYHLSALSQAAA-IVALRH-SADTLGTVEKLSVERVRVAARLEEL-GYAVV-PSESNFVFFGD 317 (369)
T ss_dssp HHHHTTSC-TTCSCHHHHHHH-HHHHHT-HHHHHTHHHHHHHHHHHHHHHHHHH-TCEEE-CCSSSEEEEEC
T ss_pred HHHHHcCC-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEEC
Confidence 88876654 346788888887 666665 34454 8889999999999999885 78875 56678888764
No 72
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.9e-37 Score=296.70 Aligned_cols=306 Identities=16% Similarity=0.229 Sum_probs=231.3
Q ss_pred cHHHHHHHHHhhcccccccc----ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH-
Q 019298 16 TIKGMLSLLMQSVDDEKNEK----KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL- 90 (343)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~----~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~- 90 (343)
.++..+..+.+.... ..+. .+|+|++|.+. + +++.+.+++.+.+. ...|+++.|.+++|+++++++
T Consensus 82 ~~~~~~~~~~~~~~~-~~~~~~l~~~i~l~~g~~~----~-~~~~~~~al~~~~~---~~~Y~~~~g~~~lr~~ia~~~~ 152 (546)
T 2zy4_A 82 GIEGRFERYIAENRD-QEGVRFLGKSLSYVRDQLG----L-DPAAFLHEMVDGIL---GCNYPVPPRMLNISEKIVRQYI 152 (546)
T ss_dssp THHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHTSC----C-CHHHHHHHHHHHHH---TCSCCSSSSCCHHHHHHHHHHH
T ss_pred cchhHHHHHHHhcCC-CCcchhHHhhhecccCCCC----C-CChHHHHHHHHhhh---cCCCCCCcCCHHHHHHHHHHHH
Confidence 456665555554421 0111 27899999853 4 45667777777664 258999889999999987765
Q ss_pred hhhCCCCC---CCCcEEEecChHHHHHHHHHH-----hcCCCCeEEEeCCCCcchHHHHHhc--CceeEEeecCCCCCCC
Q 019298 91 SRDLPYKL---TPNDVFVTSGCTQAIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFR--HIEVRHFDLLPDKGWE 160 (343)
Q Consensus 91 ~~~~~~~~---~~~~i~~~~g~~~al~~~~~~-----l~~~gd~vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~~~ 160 (343)
.++++..+ ++++|++|+|+++++..++++ ++++||+|++++|+|+.|...+... |.+++.++++++++|.
T Consensus 153 ~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 232 (546)
T 2zy4_A 153 IREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQ 232 (546)
T ss_dssp HHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTB
T ss_pred HHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCC
Confidence 44443322 568999999999999999988 4789999999999999998876554 5788888887777788
Q ss_pred CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHH--hhcCcEEEEccCCCccccCCCCCCcccccCCCCCEE
Q 019298 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA--NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238 (343)
Q Consensus 161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~--~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i 238 (343)
+|+++|++.+..+++++++++||||||.+++.+++++|+++| +++|+++|+||+|.++.++ ..++.... .+++|
T Consensus 233 ~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~i 308 (546)
T 2zy4_A 233 YPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENTL 308 (546)
T ss_dssp CCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGEE
T ss_pred CCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCEE
Confidence 999999998877889999999999999999999999999999 8899999999999998753 22232222 25899
Q ss_pred EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-------------h------------------------cc
Q 019298 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------------F------------------------DI 281 (343)
Q Consensus 239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-------------~------------------------~~ 281 (343)
+++||||.||++|+|+||+++++. ++++++.+. . ..
T Consensus 309 ~~~S~SK~~g~~GlRiG~~~~~~~-------~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 381 (546)
T 2zy4_A 309 LVYSFSKYFGATGWRLGVVAAHQQ-------NVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNH 381 (546)
T ss_dssp EEEESTTTTTCGGGCEEEEEEESS-------CHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGG
T ss_pred EEEeCccccCCCCcceEEEEECCH-------HHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhc
Confidence 999999999999999999999753 145544210 0 11
Q ss_pred ccCcchHHHHHHH----hccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 282 LGDPATFIQVCIM----YGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 282 ~~~~~~~~~~a~~----~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
..+++.+.|.++. .+++.+...+.+ .++.++++++.+.+.|. + ++.+..+++|+|+|+++
T Consensus 382 ~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~-~~~~~~~~~~~~l~~~l 446 (546)
T 2zy4_A 382 TAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG-M-PPLRDENAVDYYTLIDL 446 (546)
T ss_dssp GCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-S-SCCCCTTBCCSEEEEEH
T ss_pred cCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-C-CcccCCCCeeEEEEEEH
Confidence 2356777776641 234444345555 88889999999999986 5 46666789999999863
No 73
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=2.2e-37 Score=283.89 Aligned_cols=264 Identities=20% Similarity=0.303 Sum_probs=224.0
Q ss_pred HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH
Q 019298 60 AVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL 139 (343)
Q Consensus 60 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~ 139 (343)
++.+++... ...|++..|.++||+++++++. ++++++|++|+|+++++..++++++++||+|+++.|+|..+..
T Consensus 47 ~~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~ 120 (375)
T 3op7_A 47 DFYKKLQGT-KLNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD 120 (375)
T ss_dssp HHHHHHHTS-CCSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred HHHHHHhcC-CcCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence 444444443 3479988999999999999873 4678999999999999999999999999999999999999999
Q ss_pred HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 140 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++..|.+++.++++.++++.+|+++++++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.
T Consensus 121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~ 200 (375)
T 3op7_A 121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS 200 (375)
T ss_dssp HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS
T ss_pred HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 99999999999998776778899999999998899999999999999999999999999999999999999999999987
Q ss_pred cCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccc
Q 019298 220 FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCL 298 (343)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l 298 (343)
++ ....+. ...+++++++||||.++++|+|+||++++ ++++++++..... ..+++++.+.++ ..+|
T Consensus 201 ~~--~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~v~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l 267 (375)
T 3op7_A 201 EL--DVPSII--EVYDKGIAVNSLSKTYSLPGIRIGWVAAN--------HQVTDILRDYRDYTMICAGVFDDLVA-QLAL 267 (375)
T ss_dssp SS--CCCCHH--HHCTTEEEEEESSSSSSCGGGCCEEEECC--------HHHHHHHTTTGGGTTSCCCHHHHHHH-HHHH
T ss_pred cc--CCCchh--hhcCCEEEEeEChhhcCCcccceEEEEeC--------HHHHHHHHHHHhhhccCCCcHHHHHH-HHHH
Confidence 65 222222 22457899999999999999999999983 4788988877543 456678888777 5666
Q ss_pred hhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 299 STIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 299 ~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
.....+++ .+++++++++.+.+.|+++|++.+..|++|+++|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 312 (375)
T 3op7_A 268 AHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVK 312 (375)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEE
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEE
Confidence 65555655 778889999999999998888988789999888875
No 74
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.9e-37 Score=288.95 Aligned_cols=290 Identities=19% Similarity=0.236 Sum_probs=228.3
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHH--HHHhcC-CCCCC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVA--EALLSE-KFNGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~Y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
....|||+.|.|+.. .++.++.+.+++. +.+... ....| ++..|.++||+++++++ ++++++|++|+|+
T Consensus 24 ~~~~i~l~~g~p~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~ 96 (423)
T 3ez1_A 24 RGLNLNMQRGQPADA-DFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL------DVKAENVLVWNNS 96 (423)
T ss_dssp HTCCEESCCCCCCHH-HHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT------TSCGGGEEECSSC
T ss_pred CCceEecCCCCCChH-hCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh------CCChhhEEEeCCc
Confidence 456799999997621 1456677888775 444422 35689 88889999999999999 5788999999999
Q ss_pred HHHHH--HHHHHhcC--C---------CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh--cCCc
Q 019298 110 TQAID--VAMALLSR--P---------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA--DQNT 174 (343)
Q Consensus 110 ~~al~--~~~~~l~~--~---------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~--~~~~ 174 (343)
++++. .+++++++ + ||+|+++.|+|..+...++..|.+++.++++.+ ++|+++|++++ ++++
T Consensus 97 ~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~ 173 (423)
T 3ez1_A 97 SLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPSV 173 (423)
T ss_dssp HHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTTE
T ss_pred HHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCCc
Confidence 99998 88888877 7 599999999999999999999999999998653 49999999999 4577
Q ss_pred eEEEE-eCCCCCcccccCHHHHHHHHHHH-hhcCcEEEEccCCCccccCC-C--CCCccccc----CCCCCEEEEccCcc
Q 019298 175 VALVI-INPGNPCGNVYSYQHLQKLAETA-NKLKTLVIADEVYGHLVFGD-K--PFVPMGVF----GSTVPILTLGSLSK 245 (343)
Q Consensus 175 ~~i~~-~~p~nptG~~~~~~~l~~l~~~~-~~~~~~~i~D~ay~~~~~~~-~--~~~~~~~~----~~~~~~i~~~S~sK 245 (343)
+++++ ++||||||.+++.+++++|+++| ++||+++|+||+|..+.+.+ . ...++..+ +..+++++++||||
T Consensus 174 ~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 253 (423)
T 3ez1_A 174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK 253 (423)
T ss_dssp EEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTT
T ss_pred eEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchh
Confidence 88765 48899999999999999999999 99999999999999766554 2 22233222 34568999999999
Q ss_pred ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-h---HHHHH-HHHHHHHHHHHHH
Q 019298 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-I---MQIMI-HGNFLENFAGSCV 319 (343)
Q Consensus 246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-~---~~~l~-~~~~~~~~~~~~~ 319 (343)
. +++|+|+||++++ +++++.++.... ...+++.+.|.++ ..+|.+ . .++++ .++.++++++.+.
T Consensus 254 ~-~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (423)
T 3ez1_A 254 I-TFAGAGLGFVASS--------EDNIRWLSKYLGAQSIGPNKVEQARH-VKFLTEYPGGLEGLMRDHAAIIAPKFRAVD 323 (423)
T ss_dssp T-SCSSSSCEEEEEC--------HHHHHHHHHHHHHSCSCCCHHHHHHH-HHHHHHSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred h-ccCCcceEEEEeC--------HHHHHHHHHHHhhhccCCCHHHHHHH-HHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 9 7899999999985 368888887754 3567888888887 666654 1 23333 6677777777766
Q ss_pred HhhcC----CC-CceeeCCCCceEeeecC
Q 019298 320 PSYKL----IP-ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 320 ~~L~~----~~-g~~~~~~~~g~~~~~~l 343 (343)
+.|.+ ++ ++.+..|++|+|+|+++
T Consensus 324 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~~ 352 (423)
T 3ez1_A 324 EVLRAELGEGGEYATWTLPKGGYFISLDT 352 (423)
T ss_dssp HHHHHHHTTTTSSEEECCCSBSSCEEEEE
T ss_pred HHHHHhcCcCCCceEEeCCCccEEEEEEC
Confidence 66643 53 36777899999999864
No 75
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=8.6e-37 Score=277.39 Aligned_cols=269 Identities=15% Similarity=0.168 Sum_probs=219.9
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
++++|||+.+.+ .+++++.+.+++.+++. ....|+++.+ .++|+++++++ ++++++|++|+|+++++
T Consensus 14 g~~~id~~~~~~----~~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~al 80 (350)
T 3fkd_A 14 SSEIVNFSTTVW----TDGDKDHLEKHLVENLN--CIRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAAF 80 (350)
T ss_dssp --CCEECSCCSC----CCSCCHHHHHHHHHTGG--GGGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHHH
T ss_pred cccEEEccCCCC----CCCCCHHHHHHHHHhHh--HHhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence 578999999984 47788999999998873 3457888766 99999999998 56789999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeec-CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL-LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
..+++++. ||+|+++.|+|..+...++..|.+++.+++ +..++ +++ ++++++++++|+||||.+++.
T Consensus 81 ~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~~ 148 (350)
T 3fkd_A 81 YQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQR 148 (350)
T ss_dssp HHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCCH
Confidence 99999987 999999999999999999999999999988 43333 333 468899999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 272 (343)
+++.+|++.|+++ ++|+||+|..+.+++... ....+..+++++++|+||.|+++|+|+||++++ ++++
T Consensus 149 ~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~--------~~~~ 216 (350)
T 3fkd_A 149 TEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN--------KDFM 216 (350)
T ss_dssp HHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECC--------HHHH
T ss_pred HHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeC--------HHHH
Confidence 9999999999876 999999999987765432 234455678999999999999999999999983 4788
Q ss_pred HHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
++++.... .++++++.+.++ ..+|.+...|.+..+++.++++.+.+.|+++||+.+ .+.+|+|+|++
T Consensus 217 ~~~~~~~~-~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~ 283 (350)
T 3fkd_A 217 KRVAAFST-PWAVNALAIEAA-KFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEV-HPSGTTFFLLR 283 (350)
T ss_dssp HHHHTTCC-TTCSCHHHHHHH-HHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEE-CCCSSSEEEEE
T ss_pred HHHHHhCC-CCCCCHHHHHHH-HHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE-CCCCCcEEEEE
Confidence 88887765 457888888888 666665444555444444889999999998889887 45667777765
No 76
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=5.3e-37 Score=293.35 Aligned_cols=291 Identities=20% Similarity=0.273 Sum_probs=228.1
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhh-CC-CCCC-CCcEEEecChHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRD-LP-YKLT-PNDVFVTSGCTQ 111 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~-~~-~~~~-~~~i~~~~g~~~ 111 (343)
.+++|+.|.|. ++ ++.+.+++.+++.. ..|+ +..|.+++|+++++++.+. .+ ..+. +++|++|+|+++
T Consensus 104 ~~i~l~~g~~~----~~-~~~~v~a~~~~~~~---~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~ 175 (533)
T 3f6t_A 104 DAVNYCHTELG----LN-RDKVVAEWVNGAVA---NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTA 175 (533)
T ss_dssp HHHHHHHHTTC----CC-HHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHH
T ss_pred hheeccCCCCC----cC-CcHHHHHHHHHHHh---CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHH
Confidence 57899999865 43 56666666666653 2455 6789999999999999665 34 4444 479999999999
Q ss_pred HHHHHHHH-----hcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC--CCCCCCCHHHHHhhhcCCceEEEEeCCCC
Q 019298 112 AIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVALVIINPGN 184 (343)
Q Consensus 112 al~~~~~~-----l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~i~~~~p~n 184 (343)
++..++.+ ++++||+|++++|+|..+...++..|.+++.++++. ++++.+|+++|+++++++++++++++|+|
T Consensus 176 al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~N 255 (533)
T 3f6t_A 176 AIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTN 255 (533)
T ss_dssp HHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCT
T ss_pred HHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCC
Confidence 99999998 789999999999999999998888999999988865 56788999999999988899999999999
Q ss_pred CcccccCHHHHHHHHHHHh-hcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298 185 PCGNVYSYQHLQKLAETAN-KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (343)
Q Consensus 185 ptG~~~~~~~l~~l~~~~~-~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~ 263 (343)
|||.+++.+++++|+++|+ +||+++|+||+|+++.++.. ++.... .+++++++||||.||++|+|+||+++++..
T Consensus 256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~---~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~ 331 (533)
T 3f6t_A 256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK---SIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEKN 331 (533)
T ss_dssp TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC---CHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESSC
T ss_pred CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc---CHhhcC-CCCEEEEecCcccCCCcccceEEEEECcHH
Confidence 9999999999999999999 68999999999999876532 222222 368999999999999999999999997642
Q ss_pred CCCCchHHHHH--------------------------------Hhhhh-ccccCcchHHHHHHH---hccch------hh
Q 019298 264 GMFRKPKVVER--------------------------------MKKYF-DILGDPATFIQVCIM---YGCLS------TI 301 (343)
Q Consensus 264 ~~~~~~~~~~~--------------------------------l~~~~-~~~~~~~~~~~~a~~---~~~l~------~~ 301 (343)
.+ ..+++. ++... ....+++.+.|.++. ..+|. ..
T Consensus 332 ~~---~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~ 408 (533)
T 3f6t_A 332 VF---DDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSD 408 (533)
T ss_dssp HH---HHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTB
T ss_pred HH---HHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccch
Confidence 00 012221 12232 234567777887731 23332 22
Q ss_pred HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 302 MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 302 ~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
..+++ .+++++++++.+.+.|. + ++.+..|++|+|+|+++
T Consensus 409 ~~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~~~~~g~~~~~~l 449 (533)
T 3f6t_A 409 DPYIDIARKLVSERYDQLHDAMQ-A-PKDETDTNTHYYSLIDI 449 (533)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-C-CCCCSTTBCCSEEEEEH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-C-CccccCCCceEEEEEeh
Confidence 34444 88999999999999998 6 67777899999999863
No 77
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.5e-35 Score=266.15 Aligned_cols=268 Identities=18% Similarity=0.203 Sum_probs=218.6
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
.++.|+|+.++ +.++++|.+++++.+.... .+.|+. .+.+++|+++++++ ++++++|++|+|+++++
T Consensus 15 ~~~~i~l~~n~----~~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~l 81 (337)
T 3p1t_A 15 AAQAVCLAFNE----NPEAVEPRVQAAIAAAAAR--INRYPF-DAEPRVMRKLAEHF------SCPEDNLMLVRGIDECF 81 (337)
T ss_dssp CCCCEECSSCC----CCSCCCHHHHHHHHHHGGG--TTSCCT-THHHHHHHHHHHHH------TSCGGGEEEESHHHHHH
T ss_pred CCCceEeeCCC----CCCCCCHHHHHHHHHhhhh--hccCCC-CchHHHHHHHHHHh------CcCHHHEEEeCCHHHHH
Confidence 66789999998 4478899999999998764 567864 68899999999999 56788999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
..+++.+ +||+|+++.|+|..+...++..|.+++.++++ +++.+|++++++. .+++++++++|+||||.+++.+
T Consensus 82 ~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~ 155 (337)
T 3p1t_A 82 DRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAG 155 (337)
T ss_dssp HHHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBC--TTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHH
Confidence 9999887 89999999999999999999999999998875 3578999999886 3678999999999999999988
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++.++++ +++. +|+||+|+.+.+.+.. . ....+++++++|+||.|+++|+|+||++++ +++++
T Consensus 156 ~l~~l~~---~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~ 218 (337)
T 3p1t_A 156 ELDQLRQ---RAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGP--------SELIA 218 (337)
T ss_dssp HHHHHHH---HCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECC--------HHHHH
T ss_pred HHHHHHH---hCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeC--------HHHHH
Confidence 7776654 6675 6669999987654322 1 123357899999999999999999999985 47888
Q ss_pred HHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL 341 (343)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~ 341 (343)
.++.... .++++.+.+.++ ..+|.+...+.+.++++.++++.+.+.|+++ |+.+..++++ |+|+
T Consensus 219 ~l~~~~~-~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~ 282 (337)
T 3p1t_A 219 AMKRKQW-FCNVGTLDLHAL-EAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVASSEAN-FVLV 282 (337)
T ss_dssp HHHTTSC-TTCSCHHHHHHH-HHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSS-EEEE
T ss_pred HHHhhcC-CCCCCHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEECCCCCe-EEEE
Confidence 8877654 456788888887 6777764445557778888899999999988 8887566555 5554
No 78
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=8.8e-36 Score=269.21 Aligned_cols=269 Identities=17% Similarity=0.241 Sum_probs=219.3
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
.+.++|+.+.+ .+++++.+.+++.+++.......|+. .+..++|+++++++++. .+++++|++|+|+++++.
T Consensus 19 ~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~ 90 (335)
T 1uu1_A 19 RDKTYLALNEN----PFPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY 90 (335)
T ss_dssp CCSEEESSCCC----SSCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred CcceECCCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence 46799999984 36778999999999874334567876 47999999999999532 367889999999999999
Q ss_pred HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
.+++++ ||+|+++ |+|..+...++..|.+++.++++ +++.+|++++ ++++++++++||||||.+++.++
T Consensus 91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~ 159 (335)
T 1uu1_A 91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE 159 (335)
T ss_dssp HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence 999988 8999999 99999999999999999988874 3467888777 46889999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
+++++++| | ++|+||+|.++..+ . ....++..+++++++|+||.|+++|+|+||++++ ++++++
T Consensus 160 l~~l~~~~---~-~li~De~~~~~~~~--~--~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~~~ 223 (335)
T 1uu1_A 160 IERILKTG---A-FVALDEAYYEFHGE--S--YVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS--------EKFIDA 223 (335)
T ss_dssp HHHHHHTT---C-EEEEECTTHHHHCC--C--CGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC--------HHHHHH
T ss_pred HHHHHHhC---C-EEEEECcchhhcch--h--HHHHhhhCCCEEEEecchhhcCCcccCeEEEEeC--------HHHHHH
Confidence 99999877 7 89999999987642 1 1222344568899999999999999999999984 468888
Q ss_pred HhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++.... .++++++.|.++ ..+|.+ .++++ .+++++++++.+.+.|+++ |+.+ .|.+|+|+|+++
T Consensus 224 l~~~~~-~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~ 288 (335)
T 1uu1_A 224 YNRVRL-PFNVSYVSQMFA-KVALDH-REIFEERTKFIVEERERMKSALREM-GYRI-TDSRGNFVFVFM 288 (335)
T ss_dssp HHHHSC-TTCSCHHHHHHH-HHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHH-TCCB-CCCCSSEEEEEC
T ss_pred HHHhcC-CCCcCHHHHHHH-HHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC-CcEE-cCCCCeEEEEEC
Confidence 877654 357888888888 667765 33444 8888999999999999887 7776 466788999864
No 79
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=4.8e-35 Score=266.96 Aligned_cols=273 Identities=15% Similarity=0.248 Sum_probs=221.1
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+.++|+|+.+++ .+++++.+.+++.+++... ....|++. +..++|+++++++ ++++++|++|+|+++
T Consensus 25 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~------g~~~~~i~~t~g~~~ 93 (360)
T 3hdo_A 25 IASWIKLNTNEN----PYPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELY------GFDPSWIIMANGSDE 93 (360)
T ss_dssp CTTSEECSSCCC----SSCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHH------TCCGGGEEEESSHHH
T ss_pred ccceeeccCCCC----CCCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHh------CcCcceEEEcCCHHH
Confidence 567899999994 4788999999999998763 24578764 6799999999999 467899999999999
Q ss_pred HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~ 191 (343)
++..++++++++||+|+++.|+|..+...++..|.+++.++++. ++.+ +++++.+ +++++++++|+||||.+++
T Consensus 94 al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~~ 167 (360)
T 3hdo_A 94 VLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSFP 167 (360)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999998753 3344 5554433 3568999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
.+++.+| |+++|+++|+||+|..+. +.... ......+++++++|+||.|+++|+|+||++++ +++
T Consensus 168 ~~~l~~l---~~~~~~~li~De~~~~~~--~~~~~--~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~ 232 (360)
T 3hdo_A 168 LEYIDEL---ARRCAGMLVLDETYAEFA--ESNAL--ELVRRHENVVVTRTLSKSYSLAGMRIGLAIAR--------PEV 232 (360)
T ss_dssp HHHHHHH---HHHBSSEEEEECTTGGGS--SCCCT--HHHHHCSSEEEEEESTTTTSCTTSCCEEEECC--------HHH
T ss_pred HHHHHHH---HHHCCCEEEEECChHhhC--Ccchh--HHhccCCCEEEEecchHhhcCCccceeeEeeC--------HHH
Confidence 8766555 568899999999999863 22222 22234468899999999999999999999984 478
Q ss_pred HHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 272 VERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 272 ~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++.++.... .++++++.+.++ .++|.+ .++++ .+++++++++.+.+.|+++ |+.+ .+.+|.|+|+++
T Consensus 233 ~~~~~~~~~-~~~~~~~~~~a~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~~~~ 300 (360)
T 3hdo_A 233 IAALDKIRD-HYNLDRLAQAAC-VAALRD-QAYLSECCRRIRETREWFTTELRSI-GYDV-IPSQGNYLFATP 300 (360)
T ss_dssp HHHHHHHSC-SCCSCHHHHHHH-HHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHT-TCEE-CCCSSSEEEEEC
T ss_pred HHHHHHhCC-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCEE-cCCCccEEEEEC
Confidence 888887765 467888888888 677776 34444 8899999999999999988 8887 456677888753
No 80
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=6.2e-36 Score=275.83 Aligned_cols=274 Identities=18% Similarity=0.183 Sum_probs=209.5
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHh--c-CCCCCCCCCCCC-----HHHHHHHHHHHhhhCCCCCCC-CcEE
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALL--S-EKFNGYAPTAGL-----PLTRRAIAEYLSRDLPYKLTP-NDVF 104 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~Y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~-~~i~ 104 (343)
+.++|+|+.|.|+ ++.++.+.+++.+... . ....+|++..|. ++||+++|++++ .+|..+.+ ++|+
T Consensus 21 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~ 95 (391)
T 3bwn_A 21 SDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIV 95 (391)
T ss_dssp TTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEE
T ss_pred CCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEE
Confidence 6678999999965 4445555555433221 1 134689999998 999999999998 46777777 5999
Q ss_pred EecChHHHHHHHHHHhcCCCC----eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEe
Q 019298 105 VTSGCTQAIDVAMALLSRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180 (343)
Q Consensus 105 ~~~g~~~al~~~~~~l~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~ 180 (343)
+|+|+++++..++++++++|| +|++++|+|..|...++..|.+++.++++.+ + ++ .+++++++++
T Consensus 96 ~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l~ 164 (391)
T 3bwn_A 96 VGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELVT 164 (391)
T ss_dssp EEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEEE
T ss_pred EeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEEC
Confidence 999999999999999999999 9999999999999999999999988887542 2 22 2468899999
Q ss_pred CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260 (343)
Q Consensus 181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~ 260 (343)
+||||||.+++ +|++.+.++++++|+||+|.. + ...++.. ..+++|+++||||+|+++|+|+||++++
T Consensus 165 ~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~~ 232 (391)
T 3bwn_A 165 SPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIGWALVK 232 (391)
T ss_dssp SSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEEC
T ss_pred CCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceEEEEec
Confidence 99999999996 344422223399999999974 1 1122222 3468899999999999999999999973
Q ss_pred CCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh----------HHHHH-HHHHHHHHHHHHHHhhcCCCCc
Q 019298 261 DPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI----------MQIMI-HGNFLENFAGSCVPSYKLIPEL 328 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~----------~~~l~-~~~~~~~~~~~~~~~L~~~~g~ 328 (343)
+ ++++++++.... ..++++.+.|.++ ..+|.+. ..+++ .++.++++++.+.+.|+++||+
T Consensus 233 ~-------~~l~~~l~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 304 (391)
T 3bwn_A 233 D-------KEVAKKMVEYIIVNSIGVSKESQVRT-AKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAF 304 (391)
T ss_dssp C-------HHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred C-------HHHHHHHHHHhcccccCCCHHHHHHH-HHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 2 468888887754 2467889999888 6777653 23454 8899999999999999988777
Q ss_pred eeeCC-------------CCceEeeecC
Q 019298 329 INFKS-------------TGSSLKYLDL 343 (343)
Q Consensus 329 ~~~~~-------------~~g~~~~~~l 343 (343)
.+..| ++|+|+|+++
T Consensus 305 ~~~~p~~~~~~f~~~~~~~~g~~~~~~~ 332 (391)
T 3bwn_A 305 TLPKYPEAFCNYFGKSLESYPAFAWLGT 332 (391)
T ss_dssp ECCCCCCEEETTTTEEECCCCSEEEEEE
T ss_pred ccccCCccccccccccCCCcceEEEecC
Confidence 66443 4566899863
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=1.1e-35 Score=277.01 Aligned_cols=273 Identities=15% Similarity=0.136 Sum_probs=217.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCC-C---CHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--GYAPTA-G---LPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~~~~-g---~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+..+|+|+.|+|+ +++++.+++++.+++...... .|++.. | .++||+++++|++++.+..+++++|++|+
T Consensus 55 ~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~ 130 (427)
T 2hox_A 55 QGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV 130 (427)
T ss_dssp TTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred CCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeC
Confidence 5678999999964 566777888888777432222 499887 8 99999999999988776668899999999
Q ss_pred ChHHHHHHHHHHh--------cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEE
Q 019298 108 GCTQAIDVAMALL--------SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179 (343)
Q Consensus 108 g~~~al~~~~~~l--------~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~ 179 (343)
|++++|..++.++ +++||.|++++|+|..+...++..|.+++.+ .+|++.|++.++++++++++
T Consensus 131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~~k~v~l 202 (427)
T 2hox_A 131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQYIEMV 202 (427)
T ss_dssp HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGGEEEEE
T ss_pred CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCCceEEEE
Confidence 9999999999999 8999999999999999999999999887643 35788888888778899999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
++||||||.+++ +. ++ ++..+.|++|.. +..++..+. .+++|+++||||.|+++|+|+||+++
T Consensus 203 ~~p~NPtG~~~~-~~-------l~--~~~~i~d~~~~~------~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~ 265 (427)
T 2hox_A 203 TSPNNPEGLLRH-AV-------IK--GCKSIYDMVYYW------PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALI 265 (427)
T ss_dssp ESSCTTTCCCCC-CS-------ST--TCEEEEECTTCS------TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEE
T ss_pred cCCCCCcccccH-HH-------Hc--CCCEEEeecccC------CCCCccccC-CCceEEEEeChhcCCCCCceEEEEEE
Confidence 999999999999 42 22 556778877742 122333333 46889999999999999999999998
Q ss_pred eCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH-----------HHH-HHHHHHHHHHHHHHhhcCCC
Q 019298 260 TDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ-----------IMI-HGNFLENFAGSCVPSYKLIP 326 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~-----------~l~-~~~~~~~~~~~~~~~L~~~~ 326 (343)
++ ++++++++..... ..+++.+.|.++ ..+|.+..+ +++ .++.++++++.+.+.|++++
T Consensus 266 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~-~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 337 (427)
T 2hox_A 266 KD-------ESVYNNLLNYMTKNTEGTPRETQLRS-LKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSD 337 (427)
T ss_dssp CC-------HHHHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred CC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-HHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 53 4788888887643 467889999888 677765433 332 77889999999999999876
Q ss_pred Ccee--------------eCCCCceEeeecC
Q 019298 327 ELIN--------------FKSTGSSLKYLDL 343 (343)
Q Consensus 327 g~~~--------------~~~~~g~~~~~~l 343 (343)
|+.+ ..|++|+|+|+++
T Consensus 338 g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~ 368 (427)
T 2hox_A 338 RFSYQELPQSEYCNYFRRMRPPSPSYAWVKC 368 (427)
T ss_dssp SEECCCCCSCEEETTTTEEECCCCSEEEEEE
T ss_pred CccccccccccccccccccCCCCceEEEEEC
Confidence 6653 3567899999864
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=2.9e-32 Score=251.82 Aligned_cols=280 Identities=16% Similarity=0.099 Sum_probs=216.0
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+.+.+||+.|.+ .++++++.+.+++.+++... ....|.+..|..++++++++++.+.+| .+++++|+|+++
T Consensus 42 g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~~~ggt~ 114 (398)
T 3a2b_A 42 GRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAILFSTGFQ 114 (398)
T ss_dssp TEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEEESSHHH
T ss_pred CceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEEECCHHH
Confidence 567899999985 13557899999999887642 233466667888888888888887665 369999999999
Q ss_pred HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCCCCCcc
Q 019298 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPCG 187 (343)
Q Consensus 112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~nptG 187 (343)
++..++++++++||.|+++.|+|..+...++..|.+++.++. +|+++|++.+++ +++++++++|+||||
T Consensus 115 a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG 187 (398)
T 3a2b_A 115 SNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEG 187 (398)
T ss_dssp HHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTC
T ss_pred HHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCCC
Confidence 999999999999999999999999999999999999988865 578999998876 688999999999999
Q ss_pred cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEEccCccccCCCCCcEEEEEEeCCCCCC
Q 019298 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266 (343)
Q Consensus 188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~ 266 (343)
.+++ +++|.++|++||+++|+||+|+.+.++.........++..++ +++++|+||.|+.+| ||++++
T Consensus 188 ~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~------ 255 (398)
T 3a2b_A 188 DIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGD------ 255 (398)
T ss_dssp CBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEEC------
T ss_pred CccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeC------
Confidence 9976 788888999999999999999987764322111111222234 599999999999888 999984
Q ss_pred CchHHHHHHhhh-hc-cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 267 RKPKVVERMKKY-FD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 267 ~~~~~~~~l~~~-~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
+++++.++.. .. .....+...|.++...+|+...+..+.+++++++++.+.+.|+++ |+.+..++ |+|+|+++
T Consensus 256 --~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-g~~~~~~~ 330 (398)
T 3a2b_A 256 --ADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH-GFDLGATE-SPILPIFI 330 (398)
T ss_dssp --HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT-TCCBCSCC-SSEEEEEC
T ss_pred --HHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc-CCCcCCCC-CCEEEEEc
Confidence 4688887764 22 233344455554324566543222248889999999999999988 88875655 68888764
No 83
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.97 E-value=5.8e-30 Score=237.67 Aligned_cols=267 Identities=14% Similarity=0.203 Sum_probs=204.3
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCC--CCCCHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK------FNGYAP--TAGLPLTRRAIAEYLSRDLPYKL-TPNDVFV 105 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~ 105 (343)
++.++|+.|.+. +.++.+.+++.+++.... ...|++ ..+..++|+.++++++ . +++++++
T Consensus 27 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~------~~~~~~v~~ 95 (420)
T 1t3i_A 27 HPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN------ARSPREIVY 95 (420)
T ss_dssp EECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEEE
T ss_pred CceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEEE
Confidence 458999999853 467899999999886421 223543 3567889999999983 3 5789999
Q ss_pred ecChHHHHHHHHHHh----cCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298 106 TSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (343)
Q Consensus 106 ~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 177 (343)
|+|+++++..+++++ .++||+|+++.|+|.. +...++..|.+++.++.+ .++.+|++++++++++++++|
T Consensus 96 ~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v 173 (420)
T 1t3i_A 96 TRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKLV 173 (420)
T ss_dssp ESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEEE
T ss_pred cCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceEE
Confidence 999999999999999 8999999999999998 556677789999988875 456799999999998889999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
++++|+||||.+++ +++|.++|+++|+++|+|++|+.+... ..+..+ +.+++++|+||.++.+| +||+
T Consensus 174 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~----~~~~~~---~~di~~~s~sK~~~~~g--~G~~ 241 (420)
T 1t3i_A 174 TVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP----LDVQLI---DCDWLVASGHKMCAPTG--IGFL 241 (420)
T ss_dssp EEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHH---TCSEEEEEGGGTTSCTT--CEEE
T ss_pred EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc----Cchhhc---CCCEEEEehhhhcCCCc--eEEE
Confidence 99999999999988 788889999999999999999864321 112222 35699999999988777 8999
Q ss_pred EEeCCCCCCCchHHHHHHhhhhcc---------------------ccCcchHHHHHHHhccchhhHH--HHHHHHHHHHH
Q 019298 258 VTTDPCGMFRKPKVVERMKKYFDI---------------------LGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLENF 314 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~~~---------------------~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~~~ 314 (343)
+++ ++++++++..... ..+.+.+.+.++...++..... +-+.+++++++
T Consensus 242 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 313 (420)
T 1t3i_A 242 YGK--------EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVEL 313 (420)
T ss_dssp EEC--------HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred EEc--------hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 985 3677777654321 1234556665542323332221 22378888999
Q ss_pred HHHHHHhhcCCCCceeeCCC
Q 019298 315 AGSCVPSYKLIPELINFKST 334 (343)
Q Consensus 315 ~~~~~~~L~~~~g~~~~~~~ 334 (343)
++.+.+.|++++|+.+..+.
T Consensus 314 ~~~l~~~L~~~~g~~~~~~~ 333 (420)
T 1t3i_A 314 THYLWQGLGQIPQLRLYGPN 333 (420)
T ss_dssp HHHHHHHHHTCTTEEEESCC
T ss_pred HHHHHHHHHhCCCeEEeCCC
Confidence 99999999998888876664
No 84
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.97 E-value=5.8e-29 Score=228.52 Aligned_cols=273 Identities=12% Similarity=0.088 Sum_probs=203.4
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-CC---CCCC--CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EK---FNGY--APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~Y--~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+..++||+.|.+ .++++++.+.+++.+++.. .. ...| +...+..++|++++++++ ++ + .++++
T Consensus 38 g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~-~-~i~~~ 106 (384)
T 1bs0_A 38 DRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG------YS-R-ALLFI 106 (384)
T ss_dssp TEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT------CS-E-EEEES
T ss_pred CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC------CC-c-EEEeC
Confidence 567899999873 2345789999999998865 21 1233 334567899999999982 32 4 44444
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC---ceEEEEeCCCC
Q 019298 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN---TVALVIINPGN 184 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~i~~~~p~n 184 (343)
++++++..+++++.++||.|+++.|+|..+...++..|.+++.++. .|++++++.+++. ++++++++|+|
T Consensus 107 sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~n 179 (384)
T 1bs0_A 107 SGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS 179 (384)
T ss_dssp CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred CcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 4589999999999999999999999999999999999999988863 4789999888653 67888899999
Q ss_pred CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCC
Q 019298 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264 (343)
Q Consensus 185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~ 264 (343)
|||.+++ +++|.++|++||+++|+||+|+.+.++.........++. ...++++|+||.++.+| ||++++
T Consensus 180 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~---- 248 (384)
T 1bs0_A 180 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCS---- 248 (384)
T ss_dssp TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEEC----
T ss_pred CCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC-CCcEEEeeccchhhccC---cEEEeC----
Confidence 9999988 678889999999999999999876543111111112221 23499999999999777 999984
Q ss_pred CCCchHHHHHHhhhh-c--cccCcchHHHHHHHhccchhhHH-HH-HHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEe
Q 019298 265 MFRKPKVVERMKKYF-D--ILGDPATFIQVCIMYGCLSTIMQ-IM-IHGNFLENFAGSCVPSYKLIPELINFKSTGSSLK 339 (343)
Q Consensus 265 ~~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~~l~~~~~-~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~ 339 (343)
++++++++... . ...+.+++.+.++ .++|+...+ +. +.+++++++++.+.+.|+++ |+.+. +.+|+++
T Consensus 249 ----~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~ 321 (384)
T 1bs0_A 249 ----STVADYLLQFARHLIYSTSMPPAQAQAL-RASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLA-DSCSAIQ 321 (384)
T ss_dssp ----HHHHHHHHHHCHHHHSSBCCCHHHHHHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC-SCCSSBC
T ss_pred ----HHHHHHHHHhchhhhcCCCCCHHHHHHH-HHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCEE
Confidence 36777776642 1 1235677777776 555654332 44 48888999999999999998 78764 4667777
Q ss_pred eec
Q 019298 340 YLD 342 (343)
Q Consensus 340 ~~~ 342 (343)
|++
T Consensus 322 ~~~ 324 (384)
T 1bs0_A 322 PLI 324 (384)
T ss_dssp CEE
T ss_pred EEE
Confidence 765
No 85
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.97 E-value=2.9e-29 Score=232.18 Aligned_cols=244 Identities=15% Similarity=0.054 Sum_probs=181.9
Q ss_pred eEeccCCCCCCCCCCCcHHHHHHHHHHHh----cCCCCCCCCCCCCH---HHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 38 ISLAMGDPTVHSCFHTTHVATEAVAEALL----SEKFNGYAPTAGLP---LTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~Y~~~~g~~---~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
.++++++|+ +..++.+.+++.++.+ ......|+. .|.+ +++++++++++ .+++++++|++
T Consensus 21 ~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g--------~~~~i~~~~g~ 87 (404)
T 1e5e_A 21 QFGAAIPPI----YQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK--------TEACVATSSGM 87 (404)
T ss_dssp TTCCSSCCC----CCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT--------CSEEEEESSHH
T ss_pred CCCCcCCCC----cCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC--------CCcEEEeCChH
Confidence 468888876 3444434333333332 223456877 5777 89999999983 24788888889
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc
Q 019298 111 QAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (343)
Q Consensus 111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt 186 (343)
+++..++++++++||+|+++.|+|..+.. .++..|.+++.++.+ |++++++.++++++++++++|+|||
T Consensus 88 ~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~Npt 160 (404)
T 1e5e_A 88 GAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANPT 160 (404)
T ss_dssp HHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTTT
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCCC
Confidence 99999999999999999999999998888 678889999988763 6889999998889999999999999
Q ss_pred ccccCHHHHHHHHHHHhh-cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCC
Q 019298 187 GNVYSYQHLQKLAETANK-LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCG 264 (343)
Q Consensus 187 G~~~~~~~l~~l~~~~~~-~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~ 264 (343)
|.+++ +++|+++|++ +|+++|+|++|..+.+.. ++ . .++++++.|+||.|+++|+|+ ||+++++
T Consensus 161 G~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~~----~~-~---~~~di~~~S~sK~~~~~g~ri~G~~~~~~--- 226 (404)
T 1e5e_A 161 LKIID---MERVCKDAHSQEGVLVIADNTFCSPMITN----PV-D---FGVDVVVHSATKYINGHTDVVAGLICGKA--- 226 (404)
T ss_dssp CCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTCC----GG-G---GTCSEEEEETTTTTTCSSCCCCEEEEECH---
T ss_pred CcccC---HHHHHHHHHhhcCCEEEEECCCchhhhCC----cc-c---cCCEEEEEcCccccCCCCCCeEEEEEECH---
Confidence 99985 7888999999 999999999999876531 12 1 246799999999999999998 9999853
Q ss_pred CCCchHHHH-HHhhhhcc--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298 265 MFRKPKVVE-RMKKYFDI--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 265 ~~~~~~~~~-~l~~~~~~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~ 324 (343)
++++ +++..... ....+++.+.++ ...|..... +.++..++.+.+.+.|++
T Consensus 227 -----~~~~~~l~~~~~~~~g~~~~~~~~~~~-~~~l~~~~~---~~~~~~~~~~~l~~~l~~ 280 (404)
T 1e5e_A 227 -----DLLQQIRMVGIKDITGSVISPHDAWLI-TRGLSTLNI---RMKAESENAMKVAEYLKS 280 (404)
T ss_dssp -----HHHHHHHHTCCCCCCCCCCCHHHHHHH-HHHHTTHHH---HHHHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHhCCCCCCCHHHHHHH-HHhHhHHHH---HHHHHHHHHHHHHHHHHh
Confidence 5666 77776543 245778877777 455543222 233334444444444443
No 86
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.97 E-value=8.2e-30 Score=235.49 Aligned_cols=274 Identities=15% Similarity=0.161 Sum_probs=206.5
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCC------CCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEE
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNG------YAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVF 104 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------Y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~ 104 (343)
+.+.++|+.+.+. +.++.+.+++.+++.... .+. |.+..+..++|+.++++++ . ++++|+
T Consensus 21 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~ 89 (406)
T 1kmj_A 21 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN------ARSAEELV 89 (406)
T ss_dssp TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEE
T ss_pred CCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEE
Confidence 3468999999843 467899999999886531 111 1234566889999999983 3 578999
Q ss_pred EecChHHHHHHHHHHh----cCCCCeEEEeCCCCcch----HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298 105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (343)
Q Consensus 105 ~~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 176 (343)
+|+|+++++..+++++ .++||+|+++.|+|.+. ...++..|.+++.++.+. ++.+|+++|++++++++++
T Consensus 90 ~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~ 167 (406)
T 1kmj_A 90 FVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRL 167 (406)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEE
T ss_pred EeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeE
Confidence 9999999999999999 88999999999998754 344667799999888753 4678999999999888999
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (343)
Q Consensus 177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 256 (343)
+++++|+||||.+++ +++|.++|++||+++|+|++|+.+.. ...+. ..+.+++++|+||.|+.+| +||
T Consensus 168 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~----~~~~~---~~~~d~~~~s~~K~~g~~G--~G~ 235 (406)
T 1kmj_A 168 LAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH----PVDVQ---ALDCDFYVFSGHKLYGPTG--IGI 235 (406)
T ss_dssp EEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHH---HHTCSEEEEEGGGTTSCTT--CEE
T ss_pred EEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC----CCccc---ccCCCEEEEEchhccCCCC--cEE
Confidence 999999999999988 78888999999999999999986421 11121 1235699999999998888 899
Q ss_pred EEEeCCCCCCCchHHHHHHhhhhc----------------------cccCcchHHHHHHHhccchhhH-HHH-HHHHHHH
Q 019298 257 FVTTDPCGMFRKPKVVERMKKYFD----------------------ILGDPATFIQVCIMYGCLSTIM-QIM-IHGNFLE 312 (343)
Q Consensus 257 i~~~~~~~~~~~~~~~~~l~~~~~----------------------~~~~~~~~~~~a~~~~~l~~~~-~~l-~~~~~~~ 312 (343)
++++ ++++++++.... ...+.+.+.+.++..+++.... ..+ +.+++++
T Consensus 236 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 307 (406)
T 1kmj_A 236 LYVK--------EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ 307 (406)
T ss_dssp EEEC--------HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EEEe--------HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 9985 367777654321 1123455556554234443221 122 3778888
Q ss_pred HHHHHHHHhhcCCCCceeeCC--CCceEee
Q 019298 313 NFAGSCVPSYKLIPELINFKS--TGSSLKY 340 (343)
Q Consensus 313 ~~~~~~~~~L~~~~g~~~~~~--~~g~~~~ 340 (343)
++++.+.+.|+++||+.+..+ .++++.|
T Consensus 308 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 337 (406)
T 1kmj_A 308 NLMHYALSQLESVPDLTLYGPQNRLGVIAF 337 (406)
T ss_dssp HHHHHHHHHHTTSTTEEEESCTTCCSEEEE
T ss_pred HHHHHHHHHHhcCCCeEEecCCCcCCEEEE
Confidence 999999999999889987777 6777665
No 87
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.97 E-value=5.3e-30 Score=234.19 Aligned_cols=275 Identities=12% Similarity=0.101 Sum_probs=198.8
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHH-HHHHHhhhCCCCCCCCcEE
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--------FNGYAPTAGLPLTRRA-IAEYLSRDLPYKLTPNDVF 104 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~Y~~~~g~~~lr~~-ia~~~~~~~~~~~~~~~i~ 104 (343)
+++.++|+.|.+. .++++.+.+++.+.+.... ...|.+..+..++++. ++++++ .+ +|+
T Consensus 6 ~~~~i~ld~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~------~~--~v~ 73 (371)
T 2e7j_A 6 TKDFINIDPLQTG----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG------CD--VAR 73 (371)
T ss_dssp --CCEECCHHHHT----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT------SS--EEE
T ss_pred CCCcEEecccccC----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC------CC--EEE
Confidence 4467888887632 5678999999998775421 1234456788999999 999983 23 999
Q ss_pred EecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-----CCceEEEE
Q 019298 105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-----QNTVALVI 179 (343)
Q Consensus 105 ~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~i~~ 179 (343)
+++|+++++..++++++++||+|++++|+|..+...++..|.+++.++...+.++.+|+++|++.++ ++++++++
T Consensus 74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~ 153 (371)
T 2e7j_A 74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALI 153 (371)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEE
Confidence 9999999999999999999999999999999999999999999999982222347799999999987 67889999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
++|+||||.+++ +++|.++|+++|+++|+|++|+.+... ..+..++ ..++++|+||+++.++ |+||+++
T Consensus 154 ~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~---~di~~~s~sK~~~~~~-~~G~~~~ 222 (371)
T 2e7j_A 154 TYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIG---ADFIVGSGHKSMAASG-PIGVMGM 222 (371)
T ss_dssp ESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHT---CSEEEEEHHHHSSCCS-SCEEEEE
T ss_pred ECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcC---CCEEEecCCcCCCCCC-CcEEEEE
Confidence 999999999987 478888899999999999999985432 1222222 3499999999987654 9999999
Q ss_pred eCCCCCCCchHHHHH-Hhhhhc--c------ccCcchHHHHHHHhccchhhHHHHHHHHHH--HHHHHHHHHhhcCCCCc
Q 019298 260 TDPCGMFRKPKVVER-MKKYFD--I------LGDPATFIQVCIMYGCLSTIMQIMIHGNFL--ENFAGSCVPSYKLIPEL 328 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~-l~~~~~--~------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~--~~~~~~~~~~L~~~~g~ 328 (343)
++ +++++ ++.... . .+.++.....++ .+++..... +.++++ +++++.+.+.|+++ |+
T Consensus 223 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-~~ 290 (371)
T 2e7j_A 223 KE--------EWAEIVLRRSEKYKNKEVELLGCTARGATIITL-MASFPHVRE--RIKRWDEEVEKARRFAAEMEKL-GI 290 (371)
T ss_dssp CT--------TTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHH-HHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHT-TC
T ss_pred ec--------hhhhhhccccccCcccccccccCCcCHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHc-Cc
Confidence 65 23343 433321 1 233444444444 333332111 456677 88889999999888 88
Q ss_pred eeeCCC--CceEeeecC
Q 019298 329 INFKST--GSSLKYLDL 343 (343)
Q Consensus 329 ~~~~~~--~g~~~~~~l 343 (343)
.+..+. .+.++|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~ 307 (371)
T 2e7j_A 291 KQLGDNPHNHDLMFFHA 307 (371)
T ss_dssp EEESSSSCCSSEEEEEC
T ss_pred EEecCCCccCceEEEEC
Confidence 876664 466888764
No 88
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.97 E-value=2.3e-29 Score=232.17 Aligned_cols=275 Identities=12% Similarity=0.076 Sum_probs=199.0
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC----CCC--CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK----FNG--YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+.+++||+.+.|- ++..++.+.+++.+++.... ... |+...+..++++.++++++ . ++.+++++
T Consensus 42 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~------~-~~~i~~~s 111 (399)
T 3tqx_A 42 EKEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG------T-DDTILYSS 111 (399)
T ss_dssp TEEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT------C-SEEEEESC
T ss_pred CeeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC------C-CcEEEECc
Confidence 4678999999532 24568999999988876421 111 2222335788899998883 2 24555554
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeC
Q 019298 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIIN 181 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~ 181 (343)
+++++..++++++++||.|+++.|+|..+...++..|.+++.++. .|++++++.+++ +++++++++
T Consensus 112 -Gt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~ 183 (399)
T 3tqx_A 112 -CFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDG 183 (399)
T ss_dssp -HHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred -hHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence 578999999999999999999999999999999999999988865 367788877765 788999999
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTT 260 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~ 260 (343)
|+||||.+++ +++|.++|++||+++|+||+|+...++..........+ ..+.+++++|+||+|+ |.+.||++++
T Consensus 184 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~ 258 (399)
T 3tqx_A 184 VFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH 258 (399)
T ss_dssp EETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC
T ss_pred CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC
Confidence 9999999988 78889999999999999999974333322211122222 1245699999999988 4455999985
Q ss_pred CCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCc
Q 019298 261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQ-IMIHGNFLENFAGSCVPSYKLIPELINFKSTGS 336 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~-~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g 336 (343)
+++++.+..... .....++..+.++ ...+....+ .-+.+++++++++.+.+.|+++ |+.+. +..|
T Consensus 259 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~ 327 (399)
T 3tqx_A 259 --------KEIIEWLRNRSRPYLFSNTVAPVIVATS-LKVLELLKTEGPQLRKQLQENSRYFRAGMEKL-GFQLV-PGNH 327 (399)
T ss_dssp --------HHHHHHHHHHCHHHHSSCCCCHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSS
T ss_pred --------HHHHHHHHHhCcceeccCCCcHHHHHHH-HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCC
Confidence 468887776521 1335566665555 555554313 2338899999999999999988 78875 4455
Q ss_pred eEeeec
Q 019298 337 SLKYLD 342 (343)
Q Consensus 337 ~~~~~~ 342 (343)
.|+|+.
T Consensus 328 ~~~~~~ 333 (399)
T 3tqx_A 328 PIIPVM 333 (399)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 667764
No 89
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.97 E-value=1.8e-29 Score=232.15 Aligned_cols=275 Identities=13% Similarity=0.044 Sum_probs=202.6
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CC-----CCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FN-----GYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
++.++|+.+.+ .+.++.+.+++.+++.... .+ .|+. ..+..++|+.+++++ ++++++|++|+
T Consensus 15 ~~~i~l~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~------g~~~~~v~~~~ 83 (390)
T 1elu_A 15 ANKTYFNFGGQ-----GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITD 83 (390)
T ss_dssp TTSEECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEES
T ss_pred CCeEEecCCcc-----CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc------CCCHHHEEEeC
Confidence 45789988862 3456789999988876421 11 3443 356788999999998 45778999999
Q ss_pred ChHHHHHHHHHHh-cCCCCeEEEeCCCCcchHHH----HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298 108 GCTQAIDVAMALL-SRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182 (343)
Q Consensus 108 g~~~al~~~~~~l-~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p 182 (343)
|+++++..+++++ .++||+|+++.|+|..+... ++..|.+++.++.++++++.+|+++|++.++++++++++++|
T Consensus 84 g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~ 163 (390)
T 1elu_A 84 NVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHL 163 (390)
T ss_dssp SHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESB
T ss_pred ChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEecc
Confidence 9999999999999 79999999999999987643 466799999998764456789999999999888999999999
Q ss_pred CCCcccccCHHHHHHHHHHHh----hcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE
Q 019298 183 GNPCGNVYSYQHLQKLAETAN----KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~----~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~ 258 (343)
+||||.+++ +++|.++|+ ++|+++|+|++|+... .... +...+.+++++|+||. ..+|.++||++
T Consensus 164 ~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~----~~~~---~~~~~~d~~~~s~~K~-~~~~~g~G~~~ 232 (390)
T 1elu_A 164 LWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS----LPLD---FSRLEVDYYAFTGHKW-FAGPAGVGGLY 232 (390)
T ss_dssp CTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT----BCCC---TTTSCCSEEEEESSST-TCCCTTCEEEE
T ss_pred ccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC----cCCC---hhhcCCCEEEcccccc-ccCCCceEEEE
Confidence 999999988 678888888 9999999999998522 1111 2223456999999994 34556799999
Q ss_pred EeCCCCCCCchHHHHHHhhh----------------------hc-cccCcchHHHHHHHhccchhhH--H-HHHHHHHHH
Q 019298 259 TTDPCGMFRKPKVVERMKKY----------------------FD-ILGDPATFIQVCIMYGCLSTIM--Q-IMIHGNFLE 312 (343)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~~----------------------~~-~~~~~~~~~~~a~~~~~l~~~~--~-~l~~~~~~~ 312 (343)
+++ +++++++.. .. ..+.++...+.++ .+++.... . +-+.+++++
T Consensus 233 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~l~~~~~~~~~~~~~~ 303 (390)
T 1elu_A 233 IHG--------DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGL-LAALQLHQRQGTAEERYQAIC 303 (390)
T ss_dssp ECT--------TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHH-HHHHHHHHHHCCHHHHHHHHH
T ss_pred ECH--------HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHH-HHHHHHHHHcCCHHHHHHHHH
Confidence 964 344444321 01 1234555666555 34443211 2 333888899
Q ss_pred HHHHHHHHhhcCCCCceeeC---CCCceEee
Q 019298 313 NFAGSCVPSYKLIPELINFK---STGSSLKY 340 (343)
Q Consensus 313 ~~~~~~~~~L~~~~g~~~~~---~~~g~~~~ 340 (343)
++++.+.+.|++++|+.+.. ++++++.|
T Consensus 304 ~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~ 334 (390)
T 1elu_A 304 QRSEFLWRGLNQLPHVHCLATSAPQAGLVSF 334 (390)
T ss_dssp HHHHHHHHHHHHSTTEEESCSSCCSSSEEEE
T ss_pred HHHHHHHHHHHhcCCcEEecCccccccEEEE
Confidence 99999999999888888764 35666555
No 90
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.96 E-value=1e-28 Score=226.79 Aligned_cols=263 Identities=16% Similarity=0.088 Sum_probs=201.6
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~ 130 (343)
.+.++.+.+++.+.+. +.|++. ..++++++++++.+.+|.. +++++++|+|+++++..++++++++||+|+++
T Consensus 29 ~~~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~ 101 (386)
T 2dr1_A 29 VACFPEVLEIMKVQMF----SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVT 101 (386)
T ss_dssp CCCCHHHHHHTTSCCC----CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEE
T ss_pred cCCcHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEE
Confidence 3567888877766543 256542 3678888888887777654 46789999999999999999999999999999
Q ss_pred CCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh--cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298 131 RPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA--DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (343)
Q Consensus 131 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 206 (343)
+|+|.+ +...++..|.+++.++.+. ++.+|+++|++++ .++++++++++|+||||.+.+ +++|.++|++||
T Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 176 (386)
T 2dr1_A 102 IIGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHD 176 (386)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTT
T ss_pred cCCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcC
Confidence 999988 8888888999999998764 4679999999998 457899999999999999965 788899999999
Q ss_pred cEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh----------
Q 019298 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK---------- 276 (343)
Q Consensus 207 ~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~---------- 276 (343)
+++|+|++|+.+.+. .. +...+.+++++|+||.++.++ ++||+++++ +++++++
T Consensus 177 ~~li~D~a~~~~~~~----~~---~~~~~~di~~~s~sK~~~~~~-g~G~~~~~~--------~~~~~~~~~~~~~~~~~ 240 (386)
T 2dr1_A 177 KLVFVDAVSAMGGAD----IK---FDKWGLDVVFSSSQKAFGVPP-GLAIGAFSE--------RFLEIAEKMPERGWYFD 240 (386)
T ss_dssp CEEEEECTTTBTTBC----CC---TTTTTCSEEEEETTSTTCCCS-SCEEEEECH--------HHHHHHTTCTTCCSTTC
T ss_pred CeEEEEccccccCcc----cc---ccccCCcEEEEeccccccCCC-ceEEEEECH--------HHHHHHhcCCCCceEEe
Confidence 999999999975432 11 222345699999999988763 389999853 5666652
Q ss_pred ------hh---hccccCcchHHHHHHHhccchhhHH---HHHHHHHHHHHHHHHHHhhcCCCCceeeCCC---CceEeee
Q 019298 277 ------KY---FDILGDPATFIQVCIMYGCLSTIMQ---IMIHGNFLENFAGSCVPSYKLIPELINFKST---GSSLKYL 341 (343)
Q Consensus 277 ------~~---~~~~~~~~~~~~~a~~~~~l~~~~~---~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~---~g~~~~~ 341 (343)
.. ....++++...+.++ ..+|+.... +-+.+++++++++.+.+.|+++ |+.+..++ .+.++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 318 (386)
T 2dr1_A 241 IPLYVKYLKEKESTPSTPPMPQVFGI-NVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDILAEPGHESPTITAV 318 (386)
T ss_dssp HHHHHHHHHHHSSCSSCCCHHHHHHH-HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEE
T ss_pred HHHHHHhhccCCCCCCCCCHHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEE
Confidence 11 122446777778777 566654333 2348888999999999999988 88876665 3777777
Q ss_pred cC
Q 019298 342 DL 343 (343)
Q Consensus 342 ~l 343 (343)
++
T Consensus 319 ~~ 320 (386)
T 2dr1_A 319 LT 320 (386)
T ss_dssp EC
T ss_pred Ec
Confidence 53
No 91
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.96 E-value=2.2e-28 Score=227.93 Aligned_cols=275 Identities=16% Similarity=0.095 Sum_probs=201.2
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-C-CCCCCCCCCCC----HHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-E-KFNGYAPTAGL----PLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~Y~~~~g~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
++++|||+.|++ .++..++.+.+++.+++.. + ....|....|. .++++.++++++ . ++.++++
T Consensus 63 g~~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g------~--~~~i~~~ 131 (427)
T 2w8t_A 63 GKDTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG------T--TGAIVFS 131 (427)
T ss_dssp TEEEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT------C--SEEEEES
T ss_pred CceEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC------C--CceEEec
Confidence 567889999973 2345789999999998865 2 12233333343 778888888872 2 3566666
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCCC
Q 019298 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPG 183 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~ 183 (343)
++++++..++++++++||.|+++.|+|..+...++..|.+++.++. .|+++|++.+++ ++++|++++++
T Consensus 132 sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~~ 204 (427)
T 2w8t_A 132 TGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGVY 204 (427)
T ss_dssp CHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESEE
T ss_pred CcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCCC
Confidence 6777999999999999999999999999999999999999887753 589999998875 67899999999
Q ss_pred CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDP 262 (343)
Q Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~ 262 (343)
||||.+++ +++|.++|++||+++|+||+|..+.++.........++ ..+.+++++||||.++++| ||++++.
T Consensus 205 n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~- 277 (427)
T 2w8t_A 205 SMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH- 277 (427)
T ss_dssp TTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC-
T ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH-
Confidence 99999987 78889999999999999999999877532211111122 1234799999999998777 9999853
Q ss_pred CCCCCchHHHHHHhhhh-c--cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCC-CceE
Q 019298 263 CGMFRKPKVVERMKKYF-D--ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKST-GSSL 338 (343)
Q Consensus 263 ~~~~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~-~g~~ 338 (343)
++++.++... . .+...++..++++ .++|+...+.-+.+++++++++.+.+.|+++ |+.+..+. .|.+
T Consensus 278 -------~l~~~l~~~~~~~~~~~~~~~~~~aa~-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 348 (427)
T 2w8t_A 278 -------PKFEAVRLACRPYIFTASLPPSVVATA-TTSIRKLMTAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAI 348 (427)
T ss_dssp -------TTGGGGGGTCHHHHSSCCCCHHHHHHH-HHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSE
T ss_pred -------HHHHHHHHhcccccccCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCE
Confidence 3555555431 1 1334566555555 4555432222348889999999999999888 78865333 5677
Q ss_pred eeec
Q 019298 339 KYLD 342 (343)
Q Consensus 339 ~~~~ 342 (343)
+|+.
T Consensus 349 ~~~~ 352 (427)
T 2w8t_A 349 VAVM 352 (427)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7775
No 92
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.96 E-value=4.6e-29 Score=228.40 Aligned_cols=279 Identities=15% Similarity=0.088 Sum_probs=200.5
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+..++||+.+.+. +.++ +++.+.+++.+++... ....|+. .+..++++.+++++ ++ ++++++++|++
T Consensus 27 g~~~ld~~~~~~~--~~~g~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~-~~~v~~~~g~t 96 (375)
T 2eh6_A 27 GKEYLDFVSGIGV--NSLGHAYPKLTEALKEQVEKLLHVSNLYEN-PWQEELAHKLVKHF------WT-EGKVFFANSGT 96 (375)
T ss_dssp CCEEEESSHHHHT--CTTCBSCHHHHHHHHHHHHHCSCCCTTBCC-HHHHHHHHHHHHTS------SS-CEEEEEESSHH
T ss_pred CCEEEEcCCcccc--cccCCCCHHHHHHHHHHHHhccccCcccCC-HHHHHHHHHHHhhc------CC-CCeEEEeCchH
Confidence 6778999999864 2356 7899999999988642 2235743 56788999998886 33 48999999999
Q ss_pred HHHHHHHHH---hc---CCC-CeEEEeCCCCcchHHHHHhcCceeE----EeecCCCCCCC----CCHHHHHhhhcCCce
Q 019298 111 QAIDVAMAL---LS---RPG-ANILLPRPGFPIYELSAAFRHIEVR----HFDLLPDKGWE----VDLDDIESLADQNTV 175 (343)
Q Consensus 111 ~al~~~~~~---l~---~~g-d~vl~~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~~~----~d~~~l~~~~~~~~~ 175 (343)
+++..+++. +. ++| |+|++++|+|+.+...+...+.... ..++. .++. .|+++|+++++++++
T Consensus 97 ~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~ 174 (375)
T 2eh6_A 97 ESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLV--PGFSYAKLNDIDSVYKLLDEETA 174 (375)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCC--SSEEEECTTCHHHHHTTCCTTEE
T ss_pred HHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCC--CCceeCCCchHHHHHHHhcCCeE
Confidence 999999875 35 778 9999999999887765554432211 00110 0111 489999999988889
Q ss_pred EEEEeCCCCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 176 ALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 176 ~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
++++++++||||.+ .+.+++++|.++|++||+++|+||+|.++...+.. ..+..++...+++ ||||.++ +|+|+
T Consensus 175 ~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~d~~---s~SK~~~-~g~~~ 249 (375)
T 2eh6_A 175 GIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF-YAYQHFNLKPDVI---ALAKGLG-GGVPI 249 (375)
T ss_dssp EEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EECGGGG-TTSCC
T ss_pred EEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-hhhhhcCCCCCEE---EEccccc-CCCCe
Confidence 99998899999999 56888999999999999999999999976544322 1223333222333 7889998 69999
Q ss_pred EEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 255 GWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 255 G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
||+++++ +++++++... ...++.+++.+.++ .++|+... +.+++++++++.+.+.|++++. .. .+
T Consensus 250 G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~---~~~~~~~~~~~~l~~~L~~~~~-~~-~~ 315 (375)
T 2eh6_A 250 GAILARE--------EVAQSFTPGSHGSTFGGNPLACRAG-TVVVDEVE---KLLPHVREVGNYFKEKLKELGK-GK-VK 315 (375)
T ss_dssp EEEEEEH--------HHHTTCCTTSCCCSSTTCHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHHHHTTS-SE-EE
T ss_pred EEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc-CC-ce
Confidence 9999863 5666665431 22446677877777 45554322 5778888899999999988743 33 24
Q ss_pred CCceEeeecC
Q 019298 334 TGSSLKYLDL 343 (343)
Q Consensus 334 ~~g~~~~~~l 343 (343)
..|+|+|+++
T Consensus 316 ~~g~~~~~~~ 325 (375)
T 2eh6_A 316 GRGLMLGLEL 325 (375)
T ss_dssp EETTEEEEEC
T ss_pred EEEEEEEEEE
Confidence 5678888764
No 93
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.96 E-value=1.5e-28 Score=223.35 Aligned_cols=279 Identities=13% Similarity=0.041 Sum_probs=204.8
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
++..++|+.+.+ .++++.+.+++.+++. .|....|..++++++++++.+.+| .++++|++|+|+++++
T Consensus 12 ~p~~i~l~~~~~-----~~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~ 79 (359)
T 1svv_A 12 KPKPYSFVNDYS-----VGMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTN 79 (359)
T ss_dssp ---CEECSCSCS-----SCCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHH
T ss_pred CCeeEEecCCCc-----CCCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHH
Confidence 456899998652 2578999999999865 466667778899999998887666 5678999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHH--HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC-------ceEEEEeCCCC
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYEL--SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN-------TVALVIINPGN 184 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~-------~~~i~~~~p~n 184 (343)
..+++.+.++||+|++++|+|..+.. .++..|.+++.++.+ ++.+|+++|++.++++ ++++++++| |
T Consensus 80 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ 155 (359)
T 1svv_A 80 LIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-T 155 (359)
T ss_dssp HHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred HHHHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence 99999999999999999999998877 478889999998863 5789999999988765 788999998 7
Q ss_pred CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (343)
Q Consensus 185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~ 263 (343)
|||.+++.+++++|+++|++||+++|+|++|..+.++..+. ....+. .....+++.|++|. +.+ .++|+++++.
T Consensus 156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~-- 230 (359)
T 1svv_A 156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILND-- 230 (359)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG--
T ss_pred CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc--
Confidence 99999999999999999999999999999995543222111 111000 00122788899998 332 4578888743
Q ss_pred CCCCchHHHHHHhhh---hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEee
Q 019298 264 GMFRKPKVVERMKKY---FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKY 340 (343)
Q Consensus 264 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~ 340 (343)
+++++++.. .......+.....++ ..++.+ ..+.+.+++++++++.+.+.| +.+|+.+..|++++|+|
T Consensus 231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~ 301 (359)
T 1svv_A 231 ------ALKPNARHLIKQRGALMAKGWLLGIQF-EVLMKD-NLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLF 301 (359)
T ss_dssp ------GGCTTHHHHHHHTTCCCTTTHHHHHHH-HHHTST-THHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEEC
T ss_pred ------cHHHHHHHHHhcCCcccccchhhHHHH-HHHHhh-hhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEE
Confidence 344444432 111111121222222 334544 344458889999999999999 55688877789999999
Q ss_pred ec
Q 019298 341 LD 342 (343)
Q Consensus 341 ~~ 342 (343)
++
T Consensus 302 ~~ 303 (359)
T 1svv_A 302 PI 303 (359)
T ss_dssp BE
T ss_pred EE
Confidence 75
No 94
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.96 E-value=1e-28 Score=227.57 Aligned_cols=260 Identities=13% Similarity=0.102 Sum_probs=201.0
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEE
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILL 129 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~ 129 (343)
.+.++.+.+++.+.+.. .|++. ..++++++++++.+.+|. +++ ++++|+|+++++..++++++++||+|++
T Consensus 43 ~~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~ 114 (393)
T 1vjo_A 43 SNAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAMEATIANAVEPGDVVLI 114 (393)
T ss_dssp CCCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHHHHHHhccCCCCEEEE
Confidence 45678888887775432 46542 457778888887776654 567 8999999999999999999999999999
Q ss_pred eCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298 130 PRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (343)
Q Consensus 130 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 206 (343)
++|+|.. +...++..|.+++.++++. ++.+|+++|++.+++ +++++++++|+||||.+++ +++|.++|+++|
T Consensus 115 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 189 (393)
T 1vjo_A 115 GVAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFG 189 (393)
T ss_dssp EESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHT
T ss_pred EcCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcC
Confidence 9999998 8888899999999998764 456999999999987 8899999999999999976 678889999999
Q ss_pred cEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh----h---
Q 019298 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----F--- 279 (343)
Q Consensus 207 ~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~----~--- 279 (343)
+++|+|++|.. +.. +.. +...+.+++++|+||.++.+| |+||+++++ +++++++.. .
T Consensus 190 ~~li~Dea~~~---g~~-~~~---~~~~~~di~~~s~sK~l~~~~-~~G~l~~~~--------~~~~~~~~~~~~~~~~~ 253 (393)
T 1vjo_A 190 TLLLVDTVTSL---GGV-PIF---LDAWGVDLAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVANWY 253 (393)
T ss_dssp CEEEEECTTTT---TTS-CCC---TTTTTCSEEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSCST
T ss_pred CEEEEECCccc---cCc-CCc---ccccCccEEEEcCcccccCCC-ceEEEEECH--------HHHHHHhccCCCCCcee
Confidence 99999999993 211 111 223345699999999999888 999999953 677777432 0
Q ss_pred -------------cccc-CcchHHHHHHHhccchhh-HHHH-HHHHHHHHHHHHHHHhhcCCCCceeeCCCC---ceEee
Q 019298 280 -------------DILG-DPATFIQVCIMYGCLSTI-MQIM-IHGNFLENFAGSCVPSYKLIPELINFKSTG---SSLKY 340 (343)
Q Consensus 280 -------------~~~~-~~~~~~~~a~~~~~l~~~-~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~---g~~~~ 340 (343)
.... +++...+.++ ..+|... ..++ +.+++++++++.+.+.|+++ |+.+..|++ +.++|
T Consensus 254 ~~~~~~~~~~~~~~~~~g~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 331 (393)
T 1vjo_A 254 LDMNLLGKYWGSERVYHHTAPINLYYAL-REALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTT 331 (393)
T ss_dssp TCHHHHHHHHSTTCCCCSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEE
T ss_pred cCcHhhhhhhccCCCCCCCCCHHHHHHH-HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEE
Confidence 1122 6677778777 5666542 2223 38889999999999999988 888766654 34455
Q ss_pred e
Q 019298 341 L 341 (343)
Q Consensus 341 ~ 341 (343)
+
T Consensus 332 ~ 332 (393)
T 1vjo_A 332 V 332 (393)
T ss_dssp E
T ss_pred E
Confidence 4
No 95
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.96 E-value=1.1e-28 Score=228.05 Aligned_cols=275 Identities=13% Similarity=0.069 Sum_probs=203.4
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-CCC---CCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EKF---NGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~ 106 (343)
++..++||+.+.|- ++..++.+.+++.+++.. ... +.|+ ...+..++|+++++++ +++ +.++++
T Consensus 43 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~~i~~~ 112 (401)
T 1fc4_A 43 DGSHVINFCANNYL---GLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL------GME-DAILYS 112 (401)
T ss_dssp TSCEEEECCCSCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH------TCS-EEEEES
T ss_pred CCccEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh------CCC-cEEEeC
Confidence 36788999999531 123589999999988764 211 1222 1346788999999998 333 555555
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEe
Q 019298 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVII 180 (343)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~ 180 (343)
++++++..++++++++||.|+++.|+|..+...++..|.+++.++. .|++++++.+++ ++++++++
T Consensus 113 -sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~ 184 (401)
T 1fc4_A 113 -SCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD 184 (401)
T ss_dssp -CHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred -ChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEe
Confidence 4577999999999999999999999998888888889999888752 478899888764 68899999
Q ss_pred CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC-cccc-CCCCCCcccccCCCCCEEEEccCcccc-CCCCCcEEEE
Q 019298 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVF-GDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWF 257 (343)
Q Consensus 181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~-~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i 257 (343)
+|+||||.+++ +++|.++|+++|+++|+||+|+ ++.+ .+........+.. +.+++++|+||.| ++.| ||+
T Consensus 185 ~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~ 257 (401)
T 1fc4_A 185 GVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYT 257 (401)
T ss_dssp SEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEE
T ss_pred CCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEE
Confidence 99999999988 7888899999999999999996 6653 3332221112222 3569999999998 6565 999
Q ss_pred EEeCCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298 258 VTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKST 334 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~ 334 (343)
+++ +++++.++.... ...+.+++.+.++ .++|+...+.-+.+++++++++.+.+.|+++ |+.+. +.
T Consensus 258 ~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~ 326 (401)
T 1fc4_A 258 AAR--------KEVVEWLRQRSRPYLFSNSLAPAIVAAS-IKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA-GA 326 (401)
T ss_dssp EEC--------HHHHHHHHHHCHHHHHSCCCCHHHHHHH-HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CS
T ss_pred EcC--------HHHHHHHHHhCcCceeCCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc-CC
Confidence 984 468887776431 2446788888777 5555432222347888999999999999988 78865 67
Q ss_pred CceEeeecC
Q 019298 335 GSSLKYLDL 343 (343)
Q Consensus 335 ~g~~~~~~l 343 (343)
.|+|+|+++
T Consensus 327 ~~~~~~~~~ 335 (401)
T 1fc4_A 327 DHAIIPVML 335 (401)
T ss_dssp SSSEEEEEE
T ss_pred CCCEEEEEc
Confidence 788888763
No 96
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.96 E-value=9.3e-29 Score=226.74 Aligned_cols=263 Identities=14% Similarity=0.112 Sum_probs=195.2
Q ss_pred eEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-------GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+.|+.+.. .++++.+.+++.+++.+...+ .|....+..++++.+++++ ++++++|++|+|++
T Consensus 3 ~yld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t 71 (384)
T 1eg5_A 3 VYFDNNAT-----TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCAT 71 (384)
T ss_dssp EECBTTTC-----CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHH
T ss_pred EEEecCcc-----CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEECCHH
Confidence 45666652 367899999999988642100 0122234578999999998 45778999999999
Q ss_pred HHHHHHHHHhc----CCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCC
Q 019298 111 QAIDVAMALLS----RPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183 (343)
Q Consensus 111 ~al~~~~~~l~----~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~ 183 (343)
+++..+++++. ++||+|+++.|+|+++...+ +..|.+++.++++. ++.+|+++|++.++++++++++++|+
T Consensus 72 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~ 149 (384)
T 1eg5_A 72 ESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAAN 149 (384)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBC
T ss_pred HHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCC
Confidence 99999999997 79999999999998876655 67799999888753 46799999999998889999999999
Q ss_pred CCcccccCHHHHHHHHHHHhhcC--cEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 184 NPCGNVYSYQHLQKLAETANKLK--TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 184 nptG~~~~~~~l~~l~~~~~~~~--~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
||||.+++ +++|.++|+++| +++|+|++|+. +.. +..+ ...+.+++++|+||.++.+| +||+++++
T Consensus 150 nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~---~~~-~~~~---~~~~~di~~~s~sK~~g~~G--~G~~~~~~ 217 (384)
T 1eg5_A 150 NEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTI---GKI-PFSL---EKLEVDYASFSAHKFHGPKG--VGITYIRK 217 (384)
T ss_dssp TTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTT---TTS-CCCC---TTTCCSEEEEEGGGGTSCTT--CEEEEECT
T ss_pred CCcccccC---HHHHHHHHHhcCCceEEEEEhhhhc---CCc-ccCc---hhcCCCEEEecHHHhcCCCc--eEEEEEcC
Confidence 99999988 577888888999 99999999983 221 1122 22245699999999998888 79999965
Q ss_pred CCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 262 PCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 262 ~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
...+ ...+... ....++++...+.++ .++|....++++ .+++++++++.+.+.|++ +|+.+..+
T Consensus 218 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~ 286 (384)
T 1eg5_A 218 GVPI------RPLIHGGGQERGLRSGTQNVPGIVGA-ARAMEIAVEELSEAAKHMEKLRSKLVSGLMN-LGAHIITP 286 (384)
T ss_dssp TSCC------CCSBCSSCTTTTTBCSCCCHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSC
T ss_pred CCcc------ccccccCcccccccCCCCChHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCC
Confidence 3100 1111110 112456777778777 556654323333 888899999999999988 48886554
No 97
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.96 E-value=3.6e-28 Score=226.05 Aligned_cols=268 Identities=15% Similarity=0.113 Sum_probs=196.2
Q ss_pred ccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC------------CCCHHHHHHHHHHHhhhCCCCCC
Q 019298 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT------------AGLPLTRRAIAEYLSRDLPYKLT 99 (343)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------------~g~~~lr~~ia~~~~~~~~~~~~ 99 (343)
..+++.+.|+.+.+ .++++.+.+++.+++... ..|+.+ ....++++.+++++ +++
T Consensus 18 ~~~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~ 84 (423)
T 3lvm_A 18 RAMKLPIYLDYSAT-----TPVDPRVAEKMMQFMTMD--GTFGNPASRSHRFGWQAEEAVDIARNQIADLV------GAD 84 (423)
T ss_dssp --CCSSEECBTTTC-----CCCCHHHHHHHTTSSSTT--SCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCC
T ss_pred cccCCCEeecCCCc-----CCCCHHHHHHHHHHHhhc--ccccCCCccccchhHHHHHHHHHHHHHHHHHc------CCC
Confidence 34778888888763 357899999988876511 122221 12357788888887 457
Q ss_pred CCcEEEecChHHHHHHHHHHhcC----CCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSR----PGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~----~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~ 172 (343)
+++|++|+|+++++..+++++.+ +||+|+++.|+|+++...+ ...|.+++.++.++ ++.+|+++|++++++
T Consensus 85 ~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~ 162 (423)
T 3lvm_A 85 PREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRD 162 (423)
T ss_dssp GGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCT
T ss_pred CCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCC
Confidence 78999999999999999998874 7999999999999987776 44499999998764 567899999999998
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298 173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (343)
Q Consensus 173 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 252 (343)
+++++++++|+||||.+++ +++|.++|+++|+++|+|++|+.... ... ....+..+++.|+||.++..|
T Consensus 163 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~---~~~~~~di~~~s~sK~~g~~g- 231 (423)
T 3lvm_A 163 DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL----PID---LSQLKVDLMSFSGHKIYGPKG- 231 (423)
T ss_dssp TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCC---TTTSCCSEEEEESTTTTSCSS-
T ss_pred CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CcC---hhhcCCCEEEechHHhcCCCC-
Confidence 8999999999999999988 67788889999999999999876321 111 122234599999999987777
Q ss_pred cEEEEEEeCCCCCCCchHHHHHHhhhh--------ccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhc
Q 019298 253 RLGWFVTTDPCGMFRKPKVVERMKKYF--------DILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYK 323 (343)
Q Consensus 253 r~G~i~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~ 323 (343)
+||++++++. .+.+.... ...+..+...+.++ .+++.....+++ .+++++++++.+.+.|+
T Consensus 232 -~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~ 301 (423)
T 3lvm_A 232 -IGALYVRRKP--------RVRIEAQMHGGGHERGMRSGTLPVHQIVGM-GEAYRIAKEEMATEMERLRGLRNRLWNGIK 301 (423)
T ss_dssp -CEEEEECBTT--------BCCCCCSSCSSCTTTTTCCSCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -eEEEEEeccc--------cCCCCccccCCcccccccCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999986432 22222221 11234455555555 444443333334 88899999999999999
Q ss_pred CCCCceeeCCCC
Q 019298 324 LIPELINFKSTG 335 (343)
Q Consensus 324 ~~~g~~~~~~~~ 335 (343)
++||+.+..+.+
T Consensus 302 ~~~~~~~~~~~~ 313 (423)
T 3lvm_A 302 DIEEVYLNGDLE 313 (423)
T ss_dssp TSTTEEEESCST
T ss_pred cCCCEEEeCCcc
Confidence 998998766553
No 98
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.96 E-value=9.7e-28 Score=222.35 Aligned_cols=273 Identities=13% Similarity=0.105 Sum_probs=198.5
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCC----CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNG----YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+..++||+.+++ .+++.+|.+.+++.+++++. .... |+......++++.++++++ .+..++++
T Consensus 58 g~~~ld~~s~~~---l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~~ 126 (409)
T 3kki_A 58 SPDDIILQSNDY---LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG--------FDECLLSQ 126 (409)
T ss_dssp CTTSEECCCSCT---TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT--------CSEEEEES
T ss_pred CCceEEeeccCc---cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC--------CCeEEEec
Confidence 567888887652 34667899999999998752 1111 2222346788888988883 23455556
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCc
Q 019298 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPC 186 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~npt 186 (343)
++++++..++++++++||.|+++.|+|..+...+...|.+++.++. .|+++|++.+.+ +++++++++|+|||
T Consensus 127 sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~npt 199 (409)
T 3kki_A 127 SGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYSTL 199 (409)
T ss_dssp CHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTTT
T ss_pred chHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCCC
Confidence 6679999999999999999999999999999999999999887753 579999998875 57899999999999
Q ss_pred ccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCC
Q 019298 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265 (343)
Q Consensus 187 G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~ 265 (343)
|.+++ +++|.++|++||+++|+||+|..+.++..........+. .+..+++.|+||+|+++| ||++++.
T Consensus 200 G~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~---- 269 (409)
T 3kki_A 200 GTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNN---- 269 (409)
T ss_dssp CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESS----
T ss_pred CCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECH----
Confidence 99988 788999999999999999999986554322111111111 124589999999998775 9998854
Q ss_pred CCchHHHHHHhhhh---ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 266 FRKPKVVERMKKYF---DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 266 ~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
++++.++... ......++...+++ .+++....++-+.+++++++++.+.+.|+++ |+.+. ..++++|++
T Consensus 270 ----~~~~~~~~~~~~~~~~~~~~~~~~aa~-~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~ 341 (409)
T 3kki_A 270 ----EVNRCVPFISYPAIFSSTLLPYEAAGL-ETTLEIIESADNRRQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLE 341 (409)
T ss_dssp ----SGGGTHHHHCHHHHHSBCCCHHHHHHH-HHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEE
T ss_pred ----HHHHHHHHhCcCccccCCCcHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEE
Confidence 3444444321 11233455555555 4555443333348888999999999999988 77764 467777765
No 99
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.96 E-value=3.2e-28 Score=224.87 Aligned_cols=275 Identities=15% Similarity=0.081 Sum_probs=198.4
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+++.++|+.++. .+++.+|.+.+++.+++.... ...|+...+..++|++++++++ . +++|++++
T Consensus 45 g~~~i~~~~~~~---~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~-~~~i~~~s 114 (401)
T 2bwn_A 45 KQDITVWCGNDY---LGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ------K-EAALVFSS 114 (401)
T ss_dssp EEEEEECSCSCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT------C-SEEEEESC
T ss_pred CCcEEEeeCCCc---ccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-CcEEEECC
Confidence 345678877652 235567889999999886411 1235555577899999999983 2 57888877
Q ss_pred ChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc----CCceEEEEeC
Q 019298 108 GCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIIN 181 (343)
Q Consensus 108 g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~ 181 (343)
|++ ++..++..+. .+||+|+++.|+|+.+...++..|.+++.++.+ |++++++.++ ++++++++++
T Consensus 115 G~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~ 186 (401)
T 2bwn_A 115 AYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES 186 (401)
T ss_dssp HHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred cHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEec
Confidence 766 7777766653 589999999999999999999999999888752 6788888776 5788999999
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEe
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT 260 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~ 260 (343)
|+||||.+++ +++|+++|++||+++|+|++|....++..........+. ...+++++|+||+|+++| ||++++
T Consensus 187 ~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~ 260 (401)
T 2bwn_A 187 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS 260 (401)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred CcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC
Confidence 9999999987 688889999999999999999965554222111111111 124699999999999888 999884
Q ss_pred CCCCCCCchHHHHHHhhhh---ccccCcchHHHHHHHhccchhhHHH--HHHHHHHHHHHHHHHHhhcCCCCceeeCCCC
Q 019298 261 DPCGMFRKPKVVERMKKYF---DILGDPATFIQVCIMYGCLSTIMQI--MIHGNFLENFAGSCVPSYKLIPELINFKSTG 335 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~~l~~~~~~--l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~ 335 (343)
+++++.++... ....+.++..+.++ .+++....++ -+.+++++++++.+.+.|+++ |+.+..+++
T Consensus 261 --------~~~~~~l~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 330 (401)
T 2bwn_A 261 --------ARMVDAVRSYAPGFIFSTSLPPAIAAGA-QASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIIDHGS 330 (401)
T ss_dssp --------HHHHHHHHHHCHHHHTSBCCCHHHHHHH-HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSS
T ss_pred --------HHHHHHHHHhCcCceecCCCCHHHHHHH-HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcccCCCC
Confidence 36777766432 11233455666655 4555433332 347888999999999999887 888766666
Q ss_pred ceEeeecC
Q 019298 336 SSLKYLDL 343 (343)
Q Consensus 336 g~~~~~~l 343 (343)
+ ++|+++
T Consensus 331 ~-~~~~~~ 337 (401)
T 2bwn_A 331 H-IVPVVI 337 (401)
T ss_dssp S-CEEEEC
T ss_pred C-eEEEEe
Confidence 5 677653
No 100
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.96 E-value=1.4e-27 Score=219.71 Aligned_cols=272 Identities=12% Similarity=-0.007 Sum_probs=195.0
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC-------
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP------- 123 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~------- 123 (343)
.++++.+.+++.+++.... ..|....+..++++.+++++.+.++ .++++|++|+|+++++..+++++..+
T Consensus 40 ~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~ 116 (397)
T 3f9t_A 40 SNVLPITRKIVDIFLETNL-GDPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRRK 116 (397)
T ss_dssp CCCCTHHHHHHHHHTTCCT-TSGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhh
Confidence 4567889999998876431 1222212445666666666666554 46789999999999999999998765
Q ss_pred ------CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHH
Q 019298 124 ------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQ 196 (343)
Q Consensus 124 ------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~ 196 (343)
||+|+++.|+|..+...++..|.+++.++.+. ++.+|+++|++++++ +++++++++|+||||.+.+ ++
T Consensus 117 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~ 191 (397)
T 3f9t_A 117 GLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IE 191 (397)
T ss_dssp TCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HH
T ss_pred cccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HH
Confidence 99999999999999999999999999998764 467999999999988 8999999999999999965 77
Q ss_pred HHHHHHhhcCcEEEEccCCCccccCCCCC-------CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298 197 KLAETANKLKTLVIADEVYGHLVFGDKPF-------VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (343)
Q Consensus 197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-------~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~ 269 (343)
+|.++|++||+++|+|++|+.+.++.... .....+.. +..+++.|++|. +++|.|+|+++++++
T Consensus 192 ~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~------- 262 (397)
T 3f9t_A 192 ELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKM-GHCPIPSGGILFKDI------- 262 (397)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTT-TCCCSSCEEEEESSG-------
T ss_pred HHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccc-cCCCCCceEEEEeCH-------
Confidence 88999999999999999999765432110 00111112 345889999997 567789999998653
Q ss_pred HHHHHHhhhhccc---------c---CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298 270 KVVERMKKYFDIL---------G---DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS 337 (343)
Q Consensus 270 ~~~~~l~~~~~~~---------~---~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~ 337 (343)
.+.+.++...... . ..+..++.++ ...+.. ..+.+.+++++++++.+.+.|+++ |+.+..+..+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 339 (397)
T 3f9t_A 263 GYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAV-LRYLGR-EGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILN 339 (397)
T ss_dssp GGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSS
T ss_pred HHHHhhccCCccccCCCccccccccccchHHHHHHH-HHHHhH-HHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCcc
Confidence 2444332221110 1 1233444444 233321 233347888889999999999988 88855556666
Q ss_pred Eeeec
Q 019298 338 LKYLD 342 (343)
Q Consensus 338 ~~~~~ 342 (343)
++|++
T Consensus 340 ~~~~~ 344 (397)
T 3f9t_A 340 IVAIE 344 (397)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66664
No 101
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.96 E-value=1.4e-28 Score=229.16 Aligned_cols=285 Identities=13% Similarity=0.054 Sum_probs=195.0
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+..++||+.+.... .++ +++.+.+++.+++..... ..|.+..+..+|++++++++. + . .+++|++|+|++
T Consensus 40 g~~~id~~~~~~~~--~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~ 112 (426)
T 1sff_A 40 GREYLDFAGGIAVL--NTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGS 112 (426)
T ss_dssp CCEEEESSHHHHTC--TTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHH
T ss_pred CCEEEEcccChhhc--ccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchH
Confidence 56788998887431 133 689999999999865321 145566788999999999983 2 1 348999999999
Q ss_pred HHHHHHHH---HhcCCCCeEEEeCCCCcchHH-HHHhcCce-------------eEEeecCC---CCCCCCCHHHHHhhh
Q 019298 111 QAIDVAMA---LLSRPGANILLPRPGFPIYEL-SAAFRHIE-------------VRHFDLLP---DKGWEVDLDDIESLA 170 (343)
Q Consensus 111 ~al~~~~~---~l~~~gd~vl~~~p~~~~~~~-~~~~~g~~-------------~~~~~~~~---~~~~~~d~~~l~~~~ 170 (343)
+++..+++ .+.++| .|++.+|+|+.+.. .....|.+ ++.+++.. ..++.+|+++|++++
T Consensus 113 ~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l 191 (426)
T 1sff_A 113 EAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF 191 (426)
T ss_dssp HHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHH
Confidence 99999988 667776 89999999987553 45545542 55565532 113447899999888
Q ss_pred c-----CCceEEEE-eCCCCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccC
Q 019298 171 D-----QNTVALVI-INPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243 (343)
Q Consensus 171 ~-----~~~~~i~~-~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 243 (343)
+ ++++++++ ++++| || ..++.+++++|.++|++||+++|+||+|.++.+.+.. ..+...+ ..+.+.||
T Consensus 192 ~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~---~~~di~s~ 266 (426)
T 1sff_A 192 KNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTL-FAMEQMG---VAPDLTTF 266 (426)
T ss_dssp HHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTT---SCCSEEEE
T ss_pred HhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccch-hhhhhcC---CCCCEEEE
Confidence 6 34445544 24467 99 7889999999999999999999999999987665432 1122222 12234499
Q ss_pred ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhh
Q 019298 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSY 322 (343)
Q Consensus 244 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L 322 (343)
||+|+. |+|+||+++++ ++++.+.... ....+.+++++.++ .++|+.... -+..++++++++.+.+.|
T Consensus 267 sK~~~~-GlriG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~-~aal~~~~~-~~~~~~~~~~~~~l~~~l 335 (426)
T 1sff_A 267 AKSIAG-GFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAA-LEVLKVFEQ-ENLLQKANDLGQKLKDGL 335 (426)
T ss_dssp CGGGGT-SSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHH
T ss_pred cccccC-CCceEEEEEcH--------HHHhhhccCCcCcCCCCCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 999987 99999999963 5666665432 23456788888887 444432111 015566777777777766
Q ss_pred cC----CCCceeeCCCCceEeeecC
Q 019298 323 KL----IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 323 ~~----~~g~~~~~~~~g~~~~~~l 343 (343)
+. ++.+....++ |+|+|+++
T Consensus 336 ~~~~~~~~~~~~~~~~-g~~~~~~~ 359 (426)
T 1sff_A 336 LAIAEKHPEIGDVRGL-GAMIAIEL 359 (426)
T ss_dssp HHHHHTCTTEEEEEEE-TTEEEEEE
T ss_pred HHHHHhCCCeEEEEEE-EEEEEEEE
Confidence 54 4433333444 78888763
No 102
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.96 E-value=1.3e-27 Score=219.88 Aligned_cols=255 Identities=13% Similarity=0.118 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCC
Q 019298 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG 133 (343)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~ 133 (343)
+.+.+++.+++..+.+ .|.+..+..++|++++++++. .+.|++++| ++++..+++++ .++||+|+++.|+
T Consensus 17 ~~~~~a~~~~l~~~~~-~~~~~~~~~~l~~~la~~~~~-------~~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~ 87 (388)
T 1b9h_A 17 DAERNGLVRALEQGQW-WRMGGDEVNSFEREFAAHHGA-------AHALAVTNG-THALELALQVMGVGPGTEVIVPAFT 87 (388)
T ss_dssp HHHHHHHHHHHHTSCC-BTTTCSHHHHHHHHHHHHTTC-------SEEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred HHHHHHHHHHHHcCCe-eecCCHHHHHHHHHHHHHhCC-------CeEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCc
Confidence 8999999999876433 466667889999999999842 256666665 89999999999 8999999999999
Q ss_pred CcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEcc
Q 019298 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (343)
Q Consensus 134 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ 213 (343)
|..+...++..|.+++.++++++ ++.+|+++|++++++++++|+ |+||||.+. ++++|.++|+++|+++|+|+
T Consensus 88 ~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~---~l~~i~~la~~~~~~li~D~ 160 (388)
T 1b9h_A 88 FISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMA---DMDALAKISADTGVPLLQDA 160 (388)
T ss_dssp CTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCC---CHHHHHHHHHHHTCCBCEEC
T ss_pred cHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcC---CHHHHHHHHHHcCCEEEEec
Confidence 99999999999999999988653 478999999999987776665 999999995 56888888999999999999
Q ss_pred CCCcc-ccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH--HHHHhhhhcc---------
Q 019298 214 VYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV--VERMKKYFDI--------- 281 (343)
Q Consensus 214 ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~--~~~l~~~~~~--------- 281 (343)
+|+.+ .+.+.. +..++ ++.+.||||.++++|.|+||+++++. .+ +++++.....
T Consensus 161 a~~~g~~~~~~~---~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 226 (388)
T 1b9h_A 161 AHAHGARWQGKR---VGELD----SIATFSFQNGKLMTAGEGGAVVFPDG-------ETEKYETAFLRHSCGRPRDDRRY 226 (388)
T ss_dssp TTCTTCEETTEE---GGGSS----SCEEEECCTTSSSCSSSCEEEEECTT-------CHHHHHHHHHHTBTTCCTTCSSC
T ss_pred chhcCCccCCee---ccccc----ceEEEEccCCCcccCCCeEEEEECCH-------HHHHHHHHHHHHhCCCCccCccc
Confidence 99863 333221 22222 48899999887787889999998652 24 4555433210
Q ss_pred ------c-cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC------CCCceEeeecC
Q 019298 282 ------L-GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK------STGSSLKYLDL 343 (343)
Q Consensus 282 ------~-~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~------~~~g~~~~~~l 343 (343)
+ ...+....+++ ...+ ..+.+.+++++++++.+.+.|+++||+.+.. +.+++++|+++
T Consensus 227 ~~~~~g~~~~~~~~~~a~~-~~~~---~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (388)
T 1b9h_A 227 FHKIAGSNMRLNEFSASVL-RAQL---ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRI 297 (388)
T ss_dssp CCCSCCCBCBCBHHHHHHH-HHHH---TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEEC
T ss_pred eeecccccCCcCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEe
Confidence 0 11233322222 2211 2233377788889999999999888888654 35688998864
No 103
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.96 E-value=2.8e-27 Score=220.30 Aligned_cols=257 Identities=14% Similarity=0.105 Sum_probs=195.8
Q ss_pred EeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHH
Q 019298 39 SLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM 117 (343)
Q Consensus 39 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~ 117 (343)
+|+.++|+ ++.++.+.+++.+++... .|++ ..+..++|++++++++ .+++++|+|+++++..++
T Consensus 20 ~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~l 84 (424)
T 2po3_A 20 PLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATCNATAGLQLLA 84 (424)
T ss_dssp CEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHH
T ss_pred cccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHH
Confidence 68889854 677889999999988653 5876 6788999999999993 369999999999999999
Q ss_pred HHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHH
Q 019298 118 ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK 197 (343)
Q Consensus 118 ~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~ 197 (343)
+++. +||+|++++|+|..+...+...|.+++.+++++ +++.+|+++|++.+++++++|+++ ||||.. .++++
T Consensus 85 ~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~tG~~---~~l~~ 156 (424)
T 2po3_A 85 HAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGV---HLWGRP---CAADQ 156 (424)
T ss_dssp HHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEE---CGGGCC---CCHHH
T ss_pred HHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEE---CCCCCc---CCHHH
Confidence 9985 789999999999999999999999999998864 457799999999998788888875 489987 57888
Q ss_pred HHHHHhhcCcEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh
Q 019298 198 LAETANKLKTLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK 276 (343)
Q Consensus 198 l~~~~~~~~~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~ 276 (343)
|+++|+++|+++|+|++|. ++.+++.. +..+. + +++.||||.++++|.|+||+++++ ++++++++
T Consensus 157 i~~la~~~~~~li~Dea~~~g~~~~~~~---~~~~~---d-i~~~S~sk~K~l~~~~~G~~v~~~-------~~l~~~l~ 222 (424)
T 2po3_A 157 LRKVADEHGLRLYFDAAHALGCAVDGRP---AGSLG---D-AEVFSFHATKAVNAFEGGAVVTDD-------ADLAARIR 222 (424)
T ss_dssp HHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS---S-EEEEECCTTSSSCCSSCEEEEESC-------HHHHHHHH
T ss_pred HHHHHHHcCCEEEEECccccCCeECCee---ccccc---C-EEEEeCCCCCCccCCCCeEEEeCC-------HHHHHHHH
Confidence 8999999999999999999 46554432 22222 2 899999977778889999999853 46777776
Q ss_pred hhhcccc-------------CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC-CCCc
Q 019298 277 KYFDILG-------------DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK-STGS 336 (343)
Q Consensus 277 ~~~~~~~-------------~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~-~~~g 336 (343)
....... ..+.....+. +.....+-+.+++.+++++.+.+.|.++||+.+.. ++++
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~----l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 292 (424)
T 2po3_A 223 ALHNFGFDLPGGSPAGGTNAKMSEAAAAMG----LTSLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHG 292 (424)
T ss_dssp HHHBTTTTCTTCCTTCCCBCCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGS
T ss_pred HHHhcCccccccccccCcCCCcCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCC
Confidence 6533110 1122222222 11112222366777778888889999888888655 4443
No 104
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.96 E-value=1.6e-27 Score=220.53 Aligned_cols=272 Identities=12% Similarity=0.101 Sum_probs=198.1
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCC----CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK---FNGYA----PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 108 (343)
+.+.|+.+.+ .++++.+.+++.+.+.... ...|. ...+..++|+.+++++ ++++++|++|+|
T Consensus 26 ~~~~ld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g 94 (406)
T 3cai_A 26 GWVHFDAPAG-----MLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV------NADPGGVVLGAD 94 (406)
T ss_dssp SCEECBGGGC-----CCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESC
T ss_pred CeEEEeCCCc-----CCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence 4788888873 2578899999999886421 12242 1235678899999988 456789999999
Q ss_pred hHHHHHHHHHHh---cCCCCeEEEeCCCCcchHHHHHh----cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeC
Q 019298 109 CTQAIDVAMALL---SRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN 181 (343)
Q Consensus 109 ~~~al~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 181 (343)
+++++..+++++ .++||+|+++.|+|..+...+.. .|.+++.+++++ .++.+|+++|++.++++++++++++
T Consensus 95 ~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~ 173 (406)
T 3cai_A 95 RAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI-ETGELPTWQWESLISKSTRLVAVNS 173 (406)
T ss_dssp HHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT-TTCCCCGGGHHHHCCTTEEEEEEES
T ss_pred hHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc-ccCCcCHHHHHHHhCCCceEEEEeC
Confidence 999999999887 78999999999999886554443 689999998764 3457899999999988899999999
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE-EEEEe
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG-WFVTT 260 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G-~i~~~ 260 (343)
|+||||.+++ +++|.++|+++|+++|+|++|.... ....+..+ +..+++.|+||.+| ++ +| |++++
T Consensus 174 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~---~~d~~~~s~~K~~g-~~--~G~~~~~~ 240 (406)
T 3cai_A 174 ASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPY----RLLDIRET---DADVVTVNAHAWGG-PP--IGAMVFRD 240 (406)
T ss_dssp BCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTT----CCCCHHHH---CCSEEEEEGGGGTS-CS--CEEEEESC
T ss_pred CcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCCCchhc---CCCEEEeehhhhcC-CC--cCeEEEEe
Confidence 9999999987 6788888999999999999998521 11112222 34589999999865 44 89 98885
Q ss_pred CCCCCCCchHHHHHHhhhhc---------c-ccCcchHHHHHHHhccchhhHH---------------HHH-HHHHHHHH
Q 019298 261 DPCGMFRKPKVVERMKKYFD---------I-LGDPATFIQVCIMYGCLSTIMQ---------------IMI-HGNFLENF 314 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~---------~-~~~~~~~~~~a~~~~~l~~~~~---------------~l~-~~~~~~~~ 314 (343)
++++++++.... . .+.++.....++ .+++..... +++ .+++++++
T Consensus 241 --------~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (406)
T 3cai_A 241 --------PSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGV-VASIEYLAALDESARGSRRERLAVSMQSADAYLNRV 311 (406)
T ss_dssp --------HHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHH-HHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred --------hHHHhhcCCcccCCCCCccccccCCCccHHHHHHH-HHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHH
Confidence 356666654321 1 234455544444 344433222 333 78888999
Q ss_pred HHHHHHhhcCCCCceeeCCC---CceEeeec
Q 019298 315 AGSCVPSYKLIPELINFKST---GSSLKYLD 342 (343)
Q Consensus 315 ~~~~~~~L~~~~g~~~~~~~---~g~~~~~~ 342 (343)
++.+.+.|+++||+.+..+. ++ +++++
T Consensus 312 ~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~~ 341 (406)
T 3cai_A 312 FDYLMVSLRSLPLVMLIGRPEAQIP-VVSFA 341 (406)
T ss_dssp HHHHHHHHHTCTTEEECCCCSSBCS-EEEEE
T ss_pred HHHHHHHHhcCCCeEEcCCccccCC-EEEEE
Confidence 99999999998888865653 44 56553
No 105
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.96 E-value=5.1e-28 Score=219.65 Aligned_cols=279 Identities=11% Similarity=0.081 Sum_probs=194.2
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
++..|||+.+.+ .++++.+++++.++... ....|++.....++++.+++++ | .+++|++++|+++++
T Consensus 6 ~~~~id~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~ 72 (356)
T 1v72_A 6 RPPALGFSSDNI-----AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAAN 72 (356)
T ss_dssp CCCCCBCSCGGG-----CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHH
T ss_pred CCceEeeccCCc-----cCCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHH
Confidence 567899998752 45789999999887532 2235554333445555555555 3 245699999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchHHH--HHhc--CceeEEeecCCCCCCCCCHHHHHh-hhcC-------CceEEEEeC
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYELS--AAFR--HIEVRHFDLLPDKGWEVDLDDIES-LADQ-------NTVALVIIN 181 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~d~~~l~~-~~~~-------~~~~i~~~~ 181 (343)
..+++++.++||+|+++.|+|..+... +... |.+++.++.+ ++.+|+++|++ ++++ ++++|++++
T Consensus 73 ~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~ 149 (356)
T 1v72_A 73 ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQ 149 (356)
T ss_dssp HHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEES
T ss_pred HHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEc
Confidence 999999999999999999999765544 5666 8898888763 36799999999 8875 578899999
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcccc--CCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
|+| ||.+++.+++++|+++|++||+++|+|++|..+.. .+..+..+ .+..... +++.|+||. +. ....||+++
T Consensus 150 ~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~d-~~~~s~sK~-g~-~~G~g~~~~ 224 (356)
T 1v72_A 150 ATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM-TWKAGVD-ALSFGATKN-GV-LAAEAIVLF 224 (356)
T ss_dssp SCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT-TGGGTCC-EEEECCGGG-TC-SSCEEEEES
T ss_pred CCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh-hhhhcCC-EEEEecccC-CC-cCccEEEEE
Confidence 987 99999999999999999999999999999986421 12221111 1111122 445699999 43 222347766
Q ss_pred eCCCCCCCchHHHHHHhhhhcccc--Cc-chHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCc
Q 019298 260 TDPCGMFRKPKVVERMKKYFDILG--DP-ATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGS 336 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~~~~~~--~~-~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g 336 (343)
+ ++++++++....... .. ....+.+. ...+.+ ..|.+..++++++++.+.+.|++++|+.+..|.++
T Consensus 225 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 294 (356)
T 1v72_A 225 N--------TSLATEMSYRRKRAGHLSSKMRFLSAQI-DAYLTD-DLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEA 294 (356)
T ss_dssp S--------GGGHHHHHHHHHHTTCCCSSTHHHHHHH-HHHTST-THHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCS
T ss_pred C--------HHHHhhHHHHhhccCchhhhHHHHHHHH-HHHHHh-hhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCc
Confidence 3 356666654422111 11 22223222 233333 33555777888999999999998889987778899
Q ss_pred eEeeecC
Q 019298 337 SLKYLDL 343 (343)
Q Consensus 337 ~~~~~~l 343 (343)
+|+|+++
T Consensus 295 ~~~~~~~ 301 (356)
T 1v72_A 295 NILFCRL 301 (356)
T ss_dssp SEEEEEE
T ss_pred cEEEEEc
Confidence 9999863
No 106
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.96 E-value=4.7e-27 Score=220.78 Aligned_cols=306 Identities=12% Similarity=0.042 Sum_probs=203.4
Q ss_pred ccCccccCcCccc-cHHHHHHHHHhhccccccccceeEeccCCC--CCC---CCCCCcHHHHHHHHHHHhcCCCCCCCCC
Q 019298 3 ISNGGIDNTGSII-TIKGMLSLLMQSVDDEKNEKKVISLAMGDP--TVH---SCFHTTHVATEAVAEALLSEKFNGYAPT 76 (343)
Q Consensus 3 ~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~Y~~~ 76 (343)
.+.|.....++.. .+......+.. .+.+.++|+.|.+ +.. ...+..+.+.+++. .. ...|.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~----~~-~~~y~~~ 74 (456)
T 2ez2_A 6 EPFRIKSVETVSMIPRDERLKKMQE------AGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM----MG-DEAYAGS 74 (456)
T ss_dssp CSSCCCCCCCCCCCCHHHHHHHHHH------TTTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT----TC-CCCSSSC
T ss_pred CCeeeeeecccCCCCHHHHHHHHHH------CCCCcccCCcccceeeeccccCCccCCHHHHHHhh----cc-hhhcccC
Confidence 4677788877733 23332222221 1344455555543 211 11244566666654 22 2367777
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCC-cchHHHHHhcCceeEEeecCC
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF-PIYELSAAFRHIEVRHFDLLP 155 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~ 155 (343)
.+..+||++++++++ .+++++++|+++++..++++++++|| +++.|+| ..+...+...|.+++.+++++
T Consensus 75 ~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~ 144 (456)
T 2ez2_A 75 ENFYHLERTVQELFG--------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDE 144 (456)
T ss_dssp HHHHHHHHHHHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGG
T ss_pred hhHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHcCCEEEEecccc
Confidence 788999999999993 35899999999999999999999999 7889999 777888889999999988763
Q ss_pred C----C----CCCCCHHHHHhhhcCCc----eEEEEeCCCC-CcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-----
Q 019298 156 D----K----GWEVDLDDIESLADQNT----VALVIINPGN-PCGNVYSYQHLQKLAETANKLKTLVIADEVYGH----- 217 (343)
Q Consensus 156 ~----~----~~~~d~~~l~~~~~~~~----~~i~~~~p~n-ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~----- 217 (343)
+ + ++.+|+++|++++++++ +++++++|+| |||.+++.+++++|+++|++||+++|+||+|..
T Consensus 145 ~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~ 224 (456)
T 2ez2_A 145 AHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYF 224 (456)
T ss_dssp GGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHH
T ss_pred cccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEcccccccccc
Confidence 2 2 36789999999887654 7889999998 999999999999999999999999999999986
Q ss_pred -----cccCCCCCCccc-ccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc------ccCc
Q 019298 218 -----LVFGDKPFVPMG-VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI------LGDP 285 (343)
Q Consensus 218 -----~~~~~~~~~~~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~------~~~~ 285 (343)
+.+.+....++. ......+++++ |++|. ++.| +.||+++++ ++++++++..... ....
T Consensus 225 ~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 294 (456)
T 2ez2_A 225 IKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMND-------DEMFSSAKELVVVYEGMPSYGGL 294 (456)
T ss_dssp HHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESC-------HHHHHHHHHHHHHHTCCTTTTTC
T ss_pred ccccccccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECC-------HHHHHHHHHHHhhccCcccccCc
Confidence 344443211100 01112244544 77887 4566 789998843 4677776654321 1122
Q ss_pred chHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 286 ATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 286 ~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
+.....++..+++.... .+..++.+++.+.+.+.|++. |+.+..|++|+|+|++
T Consensus 295 ~~~~~~a~a~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~~~~~~~~ 348 (456)
T 2ez2_A 295 AGRDMEAMAIGLREAMQ--YEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLD 348 (456)
T ss_dssp CHHHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSSEEEEE
T ss_pred chhHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEE
Confidence 22222221123222110 123444455566777777775 7877678899999975
No 107
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.96 E-value=2.2e-27 Score=219.25 Aligned_cols=249 Identities=15% Similarity=0.094 Sum_probs=175.3
Q ss_pred eEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298 38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (343)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~ 115 (343)
.+++++.|+........+++.+++..+........|. +.....++++.++++++ .++.++++++++++..
T Consensus 23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~~i~~~sG~~a~~~ 94 (398)
T 2rfv_A 23 STGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLER--------GEAGLATASGISAITT 94 (398)
T ss_dssp TTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHH
T ss_pred CCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHH
Confidence 3578888764333334455555554211111122333 23345677888887772 2366666667799999
Q ss_pred HHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298 116 AMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 116 ~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~ 191 (343)
+++++.++||+|+++.|+|+++...+ ...|.+++.++.. |++++++.++++++++++++|+||||.+++
T Consensus 95 ~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~ 167 (398)
T 2rfv_A 95 TLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD 167 (398)
T ss_dssp HHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC
Confidence 99999999999999999999887765 7789998888752 799999999888999999999999999986
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchH
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPK 270 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~ 270 (343)
+++|+++|+++|+++|+|++|+.+.+.. +. .+ +.++++.|+||.|+++|.|+ ||+++++ +
T Consensus 168 ---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~---~~di~~~s~sK~~~~~g~~~~G~~~~~~--------~ 228 (398)
T 2rfv_A 168 ---IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-QL---GADIVVHSVTKYINGHGDVIGGIIVGKQ--------E 228 (398)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--------H
T ss_pred ---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh---CCcEEEEeCcccccCCCCceEEEEEECH--------H
Confidence 7888999999999999999999765432 11 12 35699999999999999998 9999853 5
Q ss_pred HHH-HHhhhhcc--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298 271 VVE-RMKKYFDI--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 271 ~~~-~l~~~~~~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~ 324 (343)
+++ .++..... ....+++.+.++ ..+|+.... ..+++.++.+.+.+.|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~---~~~~~~~~~~~l~~~l~~ 281 (398)
T 2rfv_A 229 FIDQARFVGLKDITGGCMSPFNAWLT-LRGVKTLGI---RMERHCENALKIARFLEG 281 (398)
T ss_dssp HHHHHHHTHHHHTTCCCCCHHHHHHH-HHHHTTHHH---HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHH-HhhhhhHHH---HHHHHHHHHHHHHHHHHc
Confidence 555 56554432 346777777777 555544333 333444455555555544
No 108
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.95 E-value=4.1e-27 Score=218.84 Aligned_cols=284 Identities=14% Similarity=0.080 Sum_probs=188.5
Q ss_pred ccceeEeccCCCCCCCCCCC--cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFHT--THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+..++||+.+.+. +.++. +|.+.+++.+++.... .|++..+...++.++++.+.+.++... +++|++|+|+++
T Consensus 41 g~~~lD~~~~~~~--~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~e 115 (419)
T 2eo5_A 41 GNKYLDFTSGIGV--NNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTE 115 (419)
T ss_dssp SCEEEESSGGGGT--TTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHH
T ss_pred CCEEEEccCChhh--hccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHH
Confidence 5678999888754 22443 7999999999986532 233222333445555555555454333 789999999999
Q ss_pred HHHHHHHHhcC-CCCeEEEeCCCCcchHHHHH-hcC-------------ceeEEeecCCCC--CCC------------CC
Q 019298 112 AIDVAMALLSR-PGANILLPRPGFPIYELSAA-FRH-------------IEVRHFDLLPDK--GWE------------VD 162 (343)
Q Consensus 112 al~~~~~~l~~-~gd~vl~~~p~~~~~~~~~~-~~g-------------~~~~~~~~~~~~--~~~------------~d 162 (343)
++..+++.+.. +||+|++++|+|+++...+. ..| .+++.++..... .|+ +|
T Consensus 116 a~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~ 195 (419)
T 2eo5_A 116 AIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRV 195 (419)
T ss_dssp HHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHH
Confidence 99999987653 48999999999986544333 211 245566553210 112 36
Q ss_pred HHHHH-hhhcC----CceEEEEeCCC-CCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298 163 LDDIE-SLADQ----NTVALVIINPG-NPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (343)
Q Consensus 163 ~~~l~-~~~~~----~~~~i~~~~p~-nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~ 235 (343)
+++|+ +.+++ +...+++++|+ ||||. ..+.+++++|.++|++||+++|+||+|.++.+.+.. ..+...+...
T Consensus 196 ~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~-~~~~~~~~~~ 274 (419)
T 2eo5_A 196 IEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKL-FAIENFNTVP 274 (419)
T ss_dssp HHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCC
T ss_pred HHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcch-hhHHhcCCCC
Confidence 88999 88763 23456677885 67896 678889999999999999999999999987655432 1222222223
Q ss_pred CEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHH
Q 019298 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENF 314 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~ 314 (343)
+++ ||||.|+. | +|+||+++++ +++ .+......+++.+++++.++ .++|+... +.+++++++
T Consensus 275 d~~---t~sK~~~~-G~~riG~~~~~~--------~~~-~~~~~~~~t~~~n~~~~~aa-~aal~~~~---~~~~~~~~~ 337 (419)
T 2eo5_A 275 DVI---TLAKALGG-GIMPIGATIFRK--------DLD-FKPGMHSNTFGGNALACAIG-SKVIDIVK---DLLPHVNEI 337 (419)
T ss_dssp SEE---EECGGGGT-TTSCCEEEEEEG--------GGC-CC------CCCCCHHHHHHH-HHHHHHHH---HHHHHHHHH
T ss_pred CEE---EecccccC-CccceEEEEEch--------Hhh-cCCcccCCCCCCCHHHHHHH-HHHHHHHH---HHHHHHHHH
Confidence 333 79999985 9 9999999964 344 34212233567788888888 56654322 277888899
Q ss_pred HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298 315 AGSCVPSYKLIPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l 343 (343)
++.+.+.|+++ +....+ .|+|+|+++
T Consensus 338 ~~~l~~~L~~~--~~~~~~-~g~~~~i~~ 363 (419)
T 2eo5_A 338 GKIFAEELQGL--ADDVRG-IGLAWGLEY 363 (419)
T ss_dssp HHHHHHHHTTS--SSEEEE-ETTEEEEEC
T ss_pred HHHHHHHHHHh--hhheEe-eeEEEEEEE
Confidence 99999999876 333233 366777654
No 109
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.95 E-value=7.4e-28 Score=218.09 Aligned_cols=273 Identities=18% Similarity=0.131 Sum_probs=185.6
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+..+|+|+.+... + +++.+++++.+.... ...|.+..+..+||++++++++ .+++++++|+++++
T Consensus 2 ~~~~i~~~~~~~~----~-p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~ 66 (347)
T 1jg8_A 2 PHMMIDLRSDTVT----K-PTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGN 66 (347)
T ss_dssp ---CEECSCGGGC----C-CCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHH
T ss_pred CceEEEeccccCC----C-CCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHH
Confidence 4567899999832 3 568888888665322 1357766788899999999983 35778888889999
Q ss_pred HHHHHHhcCCCCeEEEeCCCCcchH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCC
Q 019298 114 DVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGN 184 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~n 184 (343)
..++++++++||+|++++|+|.... ..+...|.+++.+ .. .++.+|++++++++++ +++++++++|||
T Consensus 67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~n 143 (347)
T 1jg8_A 67 QVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHN 143 (347)
T ss_dssp HHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBT
T ss_pred HHHHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEecccc
Confidence 9999999999999999999996533 2567789888877 32 3456899999998875 578999999999
Q ss_pred Cc-ccccCHHHHHHHHHHHhhcCcEEEEccCCCcc--ccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 185 PC-GNVYSYQHLQKLAETANKLKTLVIADEVYGHL--VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 185 pt-G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~--~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
|| |.+++.+++++|+++|+++|+++|+|++|... .+.+.....+. ...+ .++.|+||.++++ +|++++.+
T Consensus 144 pt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d--~~~~s~sK~l~~~---~G~~~~~~ 216 (347)
T 1jg8_A 144 RSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYA--GYAD--SVMFCLSKGLCAP---VGSVVVGD 216 (347)
T ss_dssp TTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH--HTCS--EEEEESSSTTCCS---SCEEEEEC
T ss_pred ccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhc--cccc--EEEEecccccCCC---ceEEEEcC
Confidence 99 99999999999999999999999999997532 11122111111 1112 3445899998754 57544332
Q ss_pred CCCCCCchHHHHHHhhhhccc---cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee-eCCCCce
Q 019298 262 PCGMFRKPKVVERMKKYFDIL---GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN-FKSTGSS 337 (343)
Q Consensus 262 ~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~-~~~~~g~ 337 (343)
++++++++...... ...+...+.+. ...|.. ..+..++..++++.+.+.|+++ |+.+ ..+..++
T Consensus 217 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~---~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~ 284 (347)
T 1jg8_A 217 -------RDFIERARKARKMLGGGMRQAGVLAAAG-IIALTK---MVDRLKEDHENARFLALKLKEI-GYSVNPEDVKTN 284 (347)
T ss_dssp -------HHHHHHHHHHHHHHTCCCSSTHHHHHHH-HHHHHH---SSTTHHHHHHHHHHHHHHHHHH-TCBCCGGGCCSS
T ss_pred -------HHHHHHHHHHHHHcCCchhHHHHHHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHHHhc-CceeccCCCcce
Confidence 46777766553221 12233444444 233322 1122233345677788888777 6664 2455677
Q ss_pred EeeecC
Q 019298 338 LKYLDL 343 (343)
Q Consensus 338 ~~~~~l 343 (343)
|+|+++
T Consensus 285 ~~~~~~ 290 (347)
T 1jg8_A 285 MVILRT 290 (347)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 888764
No 110
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.95 E-value=2.3e-27 Score=217.37 Aligned_cols=267 Identities=15% Similarity=0.037 Sum_probs=189.2
Q ss_pred CCCcHHHHHHHHHHHhcCC---CCCCCCC----CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc--
Q 019298 51 FHTTHVATEAVAEALLSEK---FNGYAPT----AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-- 121 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~---~~~Y~~~----~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-- 121 (343)
.++++.+++++.+.+.+.. ...|... ....++|+.+++++ +++++++++|+|+++++..+++++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~l~~~ 83 (382)
T 4eb5_A 10 KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYAMR 83 (382)
T ss_dssp CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCTTEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEcCchHHHHHHHHHHHHhh
Confidence 3578999999999886421 1114321 24567888888887 3467899999999999999999997
Q ss_pred --CCCCeEEEeCCCCcchHHHHHh---cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHH
Q 019298 122 --RPGANILLPRPGFPIYELSAAF---RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQ 196 (343)
Q Consensus 122 --~~gd~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~ 196 (343)
++||+|++++|+|+.+...+.. .|.+++.++++. ++.+|+++|++.++++++++++++|+||||.+++ ++
T Consensus 84 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~ 158 (382)
T 4eb5_A 84 NARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VE 158 (382)
T ss_dssp HGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HH
T ss_pred ccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HH
Confidence 8999999999999988666543 689999888753 4678999999999888899999999999999987 57
Q ss_pred HHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHH-
Q 019298 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM- 275 (343)
Q Consensus 197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l- 275 (343)
+|.++|+++|++ |+|++|+.. ..+..+..+ +.+++++|+||.++.+| +||++++++..+. ......
T Consensus 159 ~i~~l~~~~~~~-i~D~a~~~g----~~~~~~~~~---~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~---~~~~~~~ 225 (382)
T 4eb5_A 159 EISEVLAGKAAL-HIDATASVG----QIEVDVEKI---GADMLTISSNDIYGPKG--VGALWIRKEAKLQ---PVILGGG 225 (382)
T ss_dssp HHHHHHTTSSEE-EEECTTTBT----TBCCCHHHH---TCSEEEEETGGGTCCSS--CEEEEEETTCCCC---CSSCSSC
T ss_pred HHHHHHHHCCCE-EEEcchhcC----CcccCcccc---CCCEEEeehHHhcCCCc--eEEEEEccccccC---ceecCCC
Confidence 889999999999 999999842 111122212 34589999999987666 7999987642111 000000
Q ss_pred hhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCC---ceEeeec
Q 019298 276 KKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTG---SSLKYLD 342 (343)
Q Consensus 276 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~---g~~~~~~ 342 (343)
.......+.++...+.++ .+++....+.++ .+++++++++.+.+.|+++||+.+..+.+ +.++|++
T Consensus 226 ~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 295 (382)
T 4eb5_A 226 QENGLRSGSENVPSIVGF-GKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVR 295 (382)
T ss_dssp TGGGTSCSCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEE
T ss_pred ccccccCCCccHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEE
Confidence 000111234455555544 444443223333 78889999999999999988888756542 4455543
No 111
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.95 E-value=2.8e-27 Score=217.77 Aligned_cols=269 Identities=13% Similarity=0.065 Sum_probs=195.8
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCT 110 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~ 110 (343)
....++++.|. .++++.+.+++.+++.. .|.+ ..+..++++.+++++ +++++ +|++|+|++
T Consensus 17 ~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~t 80 (393)
T 2huf_A 17 TPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLF------QTNNIATFCLSASGH 80 (393)
T ss_dssp CCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESSCHH
T ss_pred CCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHh------CCCCCcEEEEcCcHH
Confidence 34556666663 56788888887776542 2322 235678888888888 34565 899999999
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCCcchH--HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcc
Q 019298 111 QAIDVAMALLSRPGANILLPRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCG 187 (343)
Q Consensus 111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG 187 (343)
+++..+++++.++||+|++++|+|.++. ..++..|.+++.++++. ++.+|++++++.+++ ++++|++++|+||||
T Consensus 81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 158 (393)
T 2huf_A 81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTG 158 (393)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCcc
Confidence 9999999999999999999999998742 34566799999998754 356899999999987 899999999999999
Q ss_pred cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc-cCCCCCcEEEEEEeCCCCCC
Q 019298 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR-WIVPGWRLGWFVTTDPCGMF 266 (343)
Q Consensus 188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~~G~r~G~i~~~~~~~~~ 266 (343)
.+++ +++|.++|+++|+++|+|+++.... .... +...+..+++.|+||+ ++.+|+ ||++++
T Consensus 159 ~~~~---l~~i~~~~~~~~~~li~D~a~~~~~----~~~~---~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~------ 220 (393)
T 2huf_A 159 VLQG---LEGVGALCHQHNCLLIVDTVASLGG----APMF---MDRWEIDAMYTGSQKVLGAPPGI--TPVSFS------ 220 (393)
T ss_dssp EECC---CTTHHHHHHHTTCEEEEECTTTBTT----BCCC---TTTTTCSEEECCSSSTTCCCSSC--EEEEEC------
T ss_pred ccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCcc---hhhcCccEEEECCCcccccCCCe--EEEEEC------
Confidence 9987 7888999999999999999986421 1111 2222456899999997 456786 999985
Q ss_pred CchHHHHHHhhhh----c-------------------c-ccCcchHHHHHHHhccchhhHH--HHHHHHHHHHHHHHHHH
Q 019298 267 RKPKVVERMKKYF----D-------------------I-LGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLENFAGSCVP 320 (343)
Q Consensus 267 ~~~~~~~~l~~~~----~-------------------~-~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~~~~~~~~~ 320 (343)
++++++++... . . ...++...+.++ .+++....+ +-+.+++++++++.+.+
T Consensus 221 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~ 297 (393)
T 2huf_A 221 --HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGL-REAIAMACEEGLPALIARHEDCAKRLYR 297 (393)
T ss_dssp --HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 36777776531 1 0 123445555544 445443222 22378888999999999
Q ss_pred hhcCCCCceeeCCC---CceEeeec
Q 019298 321 SYKLIPELINFKST---GSSLKYLD 342 (343)
Q Consensus 321 ~L~~~~g~~~~~~~---~g~~~~~~ 342 (343)
.|+++ |+.+..++ +++++|++
T Consensus 298 ~L~~~-g~~~~~~~~~~~~~~~~~~ 321 (393)
T 2huf_A 298 GLQDA-GFELYADPKDRLSTVTTIK 321 (393)
T ss_dssp HHHHT-TCCBSSCGGGBCTTEEEEE
T ss_pred HHHHc-CCeeccCccccCCcEEEEE
Confidence 99988 88865553 35566654
No 112
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.95 E-value=5.5e-27 Score=215.79 Aligned_cols=268 Identities=10% Similarity=0.025 Sum_probs=191.0
Q ss_pred eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (343)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~ 115 (343)
.+.|+.+.+ .++++.+.+++.+.+.. +.| ....+..++|+.+++++ ++++++|++|+|+++++..
T Consensus 9 ~~yl~~~~~-----~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t~g~t~a~~~ 74 (392)
T 2z9v_A 9 PVITLTAGP-----VNAYPEVLRGLGRTVLY---DYDPAFQLLYEKVVDKAQKAM------RLSNKPVILHGEPVLGLEA 74 (392)
T ss_dssp CSEECSSSC-----CCCCHHHHHHTTSCCCC---TTSHHHHHHHHHHHHHHHHHT------TCSSCCEEESSCTHHHHHH
T ss_pred cceeecCCC-----cCCCHHHHHHHhccccc---cccHHHHHHHHHHHHHHHHHh------CCCCCEEEEeCCchHHHHH
Confidence 355665542 46678888888776543 112 12234567888888887 3467899999999999999
Q ss_pred HHHHhcCCCCeEEEeCCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCceEEEEeCCCCCcccccC
Q 019298 116 AMALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 116 ~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~~~~p~nptG~~~~ 191 (343)
+++++.++||+|++++|+|+++ ...++..|.+++.++++. ++.+|+++|+++++ ++++++++++|+||||.+++
T Consensus 75 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~ 152 (392)
T 2z9v_A 75 AAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY--NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP 152 (392)
T ss_dssp HHHHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC
T ss_pred HHHHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCC--CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc
Confidence 9999999999999999999775 334455799999998754 34689999999984 47889999999999999987
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchH
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPK 270 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~ 270 (343)
+++|.++|+++|+++|+|++|+... ....+..+ +..++++|+||++ +.+| +||++++ ++
T Consensus 153 ---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~---~~d~~~~s~sK~~~~~~g--~G~l~~~--------~~ 212 (392)
T 2z9v_A 153 ---IDAIGALVSAHGAYLIVDAVSSFGG----MKTHPEDC---KADIYVTGPNKCLGAPPG--LTMMGVS--------ER 212 (392)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTTBTT----BSCCGGGG---TCSEEEECSSSTTCCCSC--CEEEEEC--------HH
T ss_pred ---HHHHHHHHHHcCCeEEEEcccccCC----cccccccc---cceEEEecCcccccCCCc--eeEEEEC--------HH
Confidence 6788889999999999999998421 11112222 3458999999964 4456 5999985 36
Q ss_pred HHHHHhhhh---------------------ccccCcchHHHHHHHhccchhhHHH-H-HHHHHHHHHHHHHHHhhcCCCC
Q 019298 271 VVERMKKYF---------------------DILGDPATFIQVCIMYGCLSTIMQI-M-IHGNFLENFAGSCVPSYKLIPE 327 (343)
Q Consensus 271 ~~~~l~~~~---------------------~~~~~~~~~~~~a~~~~~l~~~~~~-l-~~~~~~~~~~~~~~~~L~~~~g 327 (343)
++++++... ...+.++...+.++ .+++...... + +.+++++++++.+.+.|+++ |
T Consensus 213 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g 290 (392)
T 2z9v_A 213 AWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGL-DVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-G 290 (392)
T ss_dssp HHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred HHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 777775311 11234455544444 4444432332 3 37888999999999999888 8
Q ss_pred ceeeCCC----CceEeeec
Q 019298 328 LINFKST----GSSLKYLD 342 (343)
Q Consensus 328 ~~~~~~~----~g~~~~~~ 342 (343)
+.+..|. .++++|++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~ 309 (392)
T 2z9v_A 291 LSVWAASDSIASPTTTAVR 309 (392)
T ss_dssp CCBSSSSGGGBCTTEEEEE
T ss_pred CeeccCCccccCCceEEEE
Confidence 8865533 46666664
No 113
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.95 E-value=1.4e-27 Score=220.84 Aligned_cols=259 Identities=20% Similarity=0.156 Sum_probs=184.6
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++.++||+.+.+....++ .+|.+.+++.+++.... ...|+. ....++++.+++++ ..+++++++|+++
T Consensus 38 g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~--------~~~~v~~~~gg~~ 107 (406)
T 4adb_A 38 GKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSGAE 107 (406)
T ss_dssp CCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTSCC-HHHHHHHHHHHHHS--------SCSEEEEESSHHH
T ss_pred CCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccCCcCC-HHHHHHHHHHHhhC--------CCCeEEEeCcHHH
Confidence 677899998853322222 58999999999887531 122322 22345555555554 3569999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCCCCCCCHHHHHhhh
Q 019298 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 112 al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
++..+++.+.. +| |.|++.+|+|+.+...+...+.. +..++. .|+++|++++
T Consensus 108 a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l 180 (406)
T 4adb_A 108 ANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASALI 180 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHHh
Confidence 99999998864 55 99999999999886655555432 222221 3799999999
Q ss_pred cCCceEEEEeCCCCCccccc--CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC
Q 019298 171 DQNTVALVIINPGNPCGNVY--SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248 (343)
Q Consensus 171 ~~~~~~i~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 248 (343)
++++++++++ |+||||.++ +.+++++|.++|++||+++|+||+|.++.+.+... .....+...+++ ||||.|+
T Consensus 181 ~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~~ 255 (406)
T 4adb_A 181 DDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKALG 255 (406)
T ss_dssp STTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG
T ss_pred cCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhhc
Confidence 8788888877 999999998 99999999999999999999999999876655432 222223223444 6799998
Q ss_pred CCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 019298 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 249 ~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~ 325 (343)
+|+|+||++++ +++++.++... ...++.+++.+.++ .++|+.... -+.+++++++++.+.+.|+++
T Consensus 256 -~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 256 -GGFPVGALLAT--------EECARVMTVGTHGTTYGGNPLASAVA-GKVLELINT-PEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_dssp -TTSCCEEEEEC--------HHHHHTCCTTSSCCSSTTCHHHHHHH-HHHHHHHSS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCeEEEEEc--------HHHHhhhccCCcCCCCCCCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHHHHH
Confidence 89999999885 36777776553 23567788888887 455443211 236777788888888877654
No 114
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.95 E-value=2.7e-28 Score=225.21 Aligned_cols=277 Identities=12% Similarity=0.065 Sum_probs=188.2
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
+..++||+.+... ..++ .+|.+.+++.+++..... +.. ....++++.+++.+.+.+| ++++++++|++++
T Consensus 39 g~~~ld~~~~~~~--~~lg~~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a 109 (397)
T 2ord_A 39 GNAYLDFTSGIAV--NVLGHSHPRLVEAIKDQAEKLIH--CSN-LFWNRPQMELAELLSKNTF----GGKVFFANTGTEA 109 (397)
T ss_dssp CCEEEESSHHHHT--CTTCBTCHHHHHHHHHHHHHCSC--CCT-TSEEHHHHHHHHHHHHTTT----SCEEEEESSHHHH
T ss_pred CCEEEECCccccc--cccCCCCHHHHHHHHHHHHhccc--Ccc-ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence 6678899887421 1122 588999999998865321 111 1112344444444444333 5899999999999
Q ss_pred HHHHHHHhcC------C-CCeEEEeCCCCcchH-HHHHhcCce------------eEEeecCCCCCCCCCHHHHHhhhcC
Q 019298 113 IDVAMALLSR------P-GANILLPRPGFPIYE-LSAAFRHIE------------VRHFDLLPDKGWEVDLDDIESLADQ 172 (343)
Q Consensus 113 l~~~~~~l~~------~-gd~vl~~~p~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~~~~ 172 (343)
+..+++++.. + ++.|++.+|+|+... ..+...|.+ +..++. .|+++|++.+++
T Consensus 110 ~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~ 182 (397)
T 2ord_A 110 NEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSE 182 (397)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCT
T ss_pred HHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhc
Confidence 9999998763 4 478999999996543 366666665 445543 279999999988
Q ss_pred CceEEEEeCCCCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC
Q 019298 173 NTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (343)
Q Consensus 173 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G 251 (343)
+++++++++|+||||. +++.+++++|+++|++||+++|+||+|.++.+.+.. ..+..++...+++ ||||.|+ +|
T Consensus 183 ~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~-~G 257 (397)
T 2ord_A 183 DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---TTAKGLG-GG 257 (397)
T ss_dssp TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGG-TT
T ss_pred CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---eeccccC-CC
Confidence 8999999999999999 999999999999999999999999999987655432 2222233222333 7899988 89
Q ss_pred CcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCC-Cce
Q 019298 252 WRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIP-ELI 329 (343)
Q Consensus 252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~-g~~ 329 (343)
+|+||++++++ ++ .++.. ....++.+++.+.++ .++|+...+ -+.+++++++++.+.+.|++++ ++.
T Consensus 258 ~r~G~~~~~~~--------~~-~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (397)
T 2ord_A 258 VPIGAVIVNER--------AN-VLEPGDHGTTFGGNPLACRAG-VTVIKELTK-EGFLEEVEEKGNYLMKKLQEMKEEYD 326 (397)
T ss_dssp SCCEEEEECST--------TC-CCCTTSSCCSSTTCHHHHHHH-HHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cCeEEEEEchH--------hc-ccCCCCcCCCCCCCHHHHHHH-HHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999998652 33 34322 222456788888777 455543222 1267888888888888887641 222
Q ss_pred e--eCCCCceEeeec
Q 019298 330 N--FKSTGSSLKYLD 342 (343)
Q Consensus 330 ~--~~~~~g~~~~~~ 342 (343)
. ..+..|.|+|++
T Consensus 327 ~~~~~~~~g~~~~~~ 341 (397)
T 2ord_A 327 VVADVRGMGLMIGIQ 341 (397)
T ss_dssp TEEEEEEETTEEEEE
T ss_pred ceEEEEEEeEEEEEE
Confidence 1 122345677765
No 115
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.95 E-value=5.7e-27 Score=215.89 Aligned_cols=275 Identities=14% Similarity=0.078 Sum_probs=194.8
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++.++||+.+.+.. .++ .+|.+.+++.+++..... ..+.+.....++++.+++++ .++++++++|+++
T Consensus 35 g~~~lD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~--------g~~~v~~~~~gt~ 104 (392)
T 3ruy_A 35 GNRYMDLLSAYSAV--NQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT--------NKEMVLPMNTGAE 104 (392)
T ss_dssp CCEEEESSHHHHTC--TTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH--------TCSEEEEESSHHH
T ss_pred CCEEEEcCCChhhh--ccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc--------CCCEEEEeCcHHH
Confidence 67789999886431 122 579999999998865321 11112234567777777776 3789999999999
Q ss_pred HHHHHHHHhcCC----------CCeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCCCCCCCHHHHHh
Q 019298 112 AIDVAMALLSRP----------GANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIES 168 (343)
Q Consensus 112 al~~~~~~l~~~----------gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~ 168 (343)
++..+++.+..+ +|+|+++.|+|+++...+...+.. +..++. .|+++|++
T Consensus 105 a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 177 (392)
T 3ruy_A 105 AVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKA 177 (392)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHH
T ss_pred HHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHH
Confidence 999999987644 689999999998776655444322 222221 27999999
Q ss_pred hhcCCceEEEEeCCCCCcccccCHHH-HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc
Q 019298 169 LADQNTVALVIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW 247 (343)
Q Consensus 169 ~~~~~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 247 (343)
+++++++++++++|+||||.+++.++ +++|+++|++||+++|+||+|.++.+.+... .....+...+++ |+||.+
T Consensus 178 ~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~l 253 (392)
T 3ruy_A 178 AITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKAL 253 (392)
T ss_dssp HCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGG
T ss_pred HhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchhh
Confidence 99888999999999999999996555 9999999999999999999998876655422 222222222333 678985
Q ss_pred CCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 019298 248 IVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 248 ~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~ 325 (343)
+. | +|+||++++ +++++.++.... ..++.+++.+.++ .++|+.... -+.+++++++++.+.+.|+++
T Consensus 254 ~g-G~~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~ 322 (392)
T 3ruy_A 254 GG-GVFPISCAAAN--------RDILGVFEPGSHGSTFGGNPLACAVS-IAALEVLEE-EKLTERSLQLGEKLVGQLKEI 322 (392)
T ss_dssp GT-TTSCCEEEEEC--------HHHHTTCCTTSSCCSSTTCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHHTTC
T ss_pred hC-ChhhhEEEEEC--------HHHHhhhccCCcCCCCCCCHHHHHHH-HHHHHHHHh-hhHHHHHHHHHHHHHHHHHHh
Confidence 43 6 999999985 356666665432 3557788888887 555543222 237888999999999999886
Q ss_pred --CCceeeCCCCceEee
Q 019298 326 --PELINFKSTGSSLKY 340 (343)
Q Consensus 326 --~g~~~~~~~~g~~~~ 340 (343)
+.+....+.++++.|
T Consensus 323 ~~~~~~~~~~~g~~~~~ 339 (392)
T 3ruy_A 323 DNPMITEVRGKGLFIGI 339 (392)
T ss_dssp CCTTEEEEEEETTEEEE
T ss_pred cCCCceEEEeeeeEEEE
Confidence 334444555555544
No 116
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.95 E-value=3.1e-27 Score=214.16 Aligned_cols=258 Identities=18% Similarity=0.136 Sum_probs=186.4
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEE
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~ 129 (343)
.++++.+++++.+++.. +.|+ ...+..++|+.+++++ +++++++++|+|+++++..+++++.++||+|++
T Consensus 10 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~ 80 (352)
T 1iug_A 10 VRLHPKALEALARPQLH---HRTEAAREVFLKARGLLREAF------RTEGEVLILTGSGTLAMEALVKNLFAPGERVLV 80 (352)
T ss_dssp CCCCHHHHHHHHSCCCC---TTSHHHHHHHHHHHHHHHHHH------TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCCHHHHHHhccCCCC---ccCHHHHHHHHHHHHHHHHHh------CCCCceEEEcCchHHHHHHHHHhccCCCCeEEE
Confidence 56789999998887642 1222 1234578999999998 346789999999999999999999999999999
Q ss_pred eCCCCcchH--HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc--
Q 019298 130 PRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-- 205 (343)
Q Consensus 130 ~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-- 205 (343)
++|+|+++. ..+...|.+++.++++. ++.+|++++++ ++++++++++|+||||.+++ +++|.++|+++
T Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 152 (352)
T 1iug_A 81 PVYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNP 152 (352)
T ss_dssp EECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCT
T ss_pred EeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCC
Confidence 999998865 44456799999998753 34688888877 57889999999999999987 67888899999
Q ss_pred CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH---------Hh
Q 019298 206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER---------MK 276 (343)
Q Consensus 206 ~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~---------l~ 276 (343)
|+++|+|++|+... . ...+.. .+..++++|+||+++.+ .++||+++++ +++++ ++
T Consensus 153 ~~~li~D~a~~~~~---~-~~~~~~---~~~d~~~~s~~K~~~~~-~g~G~~~~~~--------~~~~~~~~~~~~~~~~ 216 (352)
T 1iug_A 153 EGLVGADMVTSLLV---G-EVALEA---MGVDAAASGSQKGLMCP-PGLGFVALSP--------RALERLKPRGYYLDLA 216 (352)
T ss_dssp TCEEEEECTTTBTT---B-CCCSGG---GTCSEEEEESSSTTCCC-SCEEEEEECH--------HHHHTCCCCSSTTCHH
T ss_pred CCEEEEECCccccC---c-ceeccc---cCeeEEEecCcccccCC-CceeEEEECH--------HHHHHhhCCCceeeHH
Confidence 99999999997421 1 111221 13458899999954332 2489999853 44433 11
Q ss_pred ----hh--hccccCcchHHHHHHHhccchhhHHHH-HHHHHHHHHHHHHHHhhcCCCCceeeCCC-CceEeeecC
Q 019298 277 ----KY--FDILGDPATFIQVCIMYGCLSTIMQIM-IHGNFLENFAGSCVPSYKLIPELINFKST-GSSLKYLDL 343 (343)
Q Consensus 277 ----~~--~~~~~~~~~~~~~a~~~~~l~~~~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~-~g~~~~~~l 343 (343)
.. ....+.++...+.++ .+++.....++ +.+++++++++.+.+.|+++ |+.+..+. .++++|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 289 (352)
T 1iug_A 217 RELKAQKEGESAWTPAINLVLAV-AAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYL 289 (352)
T ss_dssp HHHHHHTTTCCSSCCCHHHHHHH-HHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEEC
T ss_pred HHHhhcccCCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEc
Confidence 11 112345566666555 44444322223 48888999999999999988 88876664 677887753
No 117
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.95 E-value=7.6e-27 Score=215.67 Aligned_cols=264 Identities=16% Similarity=0.138 Sum_probs=198.7
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~ 114 (343)
.+++||+.|.+. + ++.+.+++.+++... .|.+..+..++|++++++++ .+++++++|+++++.
T Consensus 30 ~~~id~~~~~~~----~--~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~--------~~~~v~~~~Gt~a~~ 92 (399)
T 2oga_A 30 VPFLDLKAAYEE----L--RAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCE--------TDHAVGVNSGMDALQ 92 (399)
T ss_dssp BCSCCHHHHHHH----T--HHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTT--------SSEEEEESCHHHHHH
T ss_pred CcccccCcCCCC----C--CHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHC--------CCeEEEecCHHHHHH
Confidence 477899999843 2 388999999888652 57666678899999999983 236778888899999
Q ss_pred HHHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298 115 VAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (343)
Q Consensus 115 ~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 193 (343)
.+++++ +++||+|+++.|+|..+...++..|.+++.+++++ +++.+|++++++.+++++++++ |+||||...+
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~-- 166 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD-- 166 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC--
T ss_pred HHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC--
Confidence 999999 89999999999999999999999999999998864 3567999999999987777665 6789999865
Q ss_pred HHHHHHHHHhhcCcEEEEccCCCccc-cCCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298 194 HLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (343)
Q Consensus 194 ~l~~l~~~~~~~~~~~i~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~ 270 (343)
+++|.++|+++|+++|+|++|..+. +++.. +..+. .+++.|+ ||.++.+| |+||+++++ ++
T Consensus 167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~~~~~----di~~~S~~~sK~~~~~G-~~g~~~~~~-------~~ 230 (399)
T 2oga_A 167 -MDALRELADRHGLHIVEDAAQAHGARYRGRR---IGAGS----SVAAFSFYPGKNLGCFG-DGGAVVTGD-------PE 230 (399)
T ss_dssp -HHHHHHHHHHHTCEECEECTTCTTCEETTEE---TTCTT----CEEEEECCTTSSSCCSS-CCEEEEESC-------HH
T ss_pred -HHHHHHHHHHcCCEEEEECcccccCccCCee---ccccc----CEEEEeCCCCccCCcCC-ceEEEEeCC-------HH
Confidence 7888888999999999999998753 32221 11111 3888998 79999889 999999853 46
Q ss_pred HHHHHhhhhcc-------------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceee-CCCCc
Q 019298 271 VVERMKKYFDI-------------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINF-KSTGS 336 (343)
Q Consensus 271 ~~~~l~~~~~~-------------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~-~~~~g 336 (343)
++++++..... .+..+++..+++ .+.+.... +..++.+++++.+.+.|+++||+.+. .|+++
T Consensus 231 ~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~-~~~l~~~~---~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 306 (399)
T 2oga_A 231 LAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVL-RIRLAHLD---SWNGRRSALAAEYLSGLAGLPGIGLPVTAPDT 306 (399)
T ss_dssp HHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHH-HHHHHTHH---HHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTE
T ss_pred HHHHHHHHHhcCccccccccccccCCCcCHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHhccCCCccccCCCCCC
Confidence 77777655321 123455655555 33333222 24555666778888899888888753 46677
Q ss_pred eEeee
Q 019298 337 SLKYL 341 (343)
Q Consensus 337 ~~~~~ 341 (343)
+++|+
T Consensus 307 ~~~~~ 311 (399)
T 2oga_A 307 DPVWH 311 (399)
T ss_dssp ECCCS
T ss_pred cceeE
Confidence 77763
No 118
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.95 E-value=3e-26 Score=209.64 Aligned_cols=258 Identities=16% Similarity=0.058 Sum_probs=182.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC-----CC----CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPT-----AG----LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS 121 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~-----~g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~ 121 (343)
.++++.+.+++.+.+... ..++.. .+ ..++++.+++++ +++++++++++|+++++..+++++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~~~a~~~~~~~~~ 81 (382)
T 4hvk_A 10 KPVDERILEAMLPYMTES--FGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp CCCCHHHHHHHHHHHHTS--CCCTTCSSHHHHHHHHHHHHHHHHHHHHT------TCTTEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhh--cCCCcccchHHHHHHHHHHHHHHHHHHHc------CCCcCeEEEECCchHHHHHHHHHhh
Confidence 457889999999988652 122221 11 125666666665 3467899999999999999999987
Q ss_pred ----CCCCeEEEeCCCCcchHHHHHh---cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 122 ----RPGANILLPRPGFPIYELSAAF---RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 122 ----~~gd~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
++||+|+++.++|+++...+.. .|.+++.++++ .++.+|+++|+++++++++++++++|+||||.+++
T Consensus 82 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~--- 156 (382)
T 4hvk_A 82 MRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP--- 156 (382)
T ss_dssp HHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---
T ss_pred hhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---
Confidence 8999999999999988775554 59999999876 34579999999999988999999999999999977
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
+++|.++|++||+ +|+|++|+.... ...... .+..++++|+||.+|..| +|+++++++..+. .....
T Consensus 157 ~~~i~~l~~~~~~-li~D~a~~~~~~----~~~~~~---~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~---~~~~~ 223 (382)
T 4hvk_A 157 VEEISEVLAGKAA-LHIDATASVGQI----EVDVEK---IGADMLTISSNDIYGPKG--VGALWIRKEAKLQ---PVILG 223 (382)
T ss_dssp HHHHHHHHSSSSE-EEEECTTTBTTB----CCCHHH---HTCSEEEEESGGGTSCTT--CEEEEEETTCCCC---CSSCS
T ss_pred HHHHHHHHHHcCE-EEEEhHHhcCCC----CCCchh---cCCCEEEEeHHHhcCCCc--eEEEEEcCccCcC---ccccc
Confidence 5688888999999 999999875221 111111 124599999999877666 7777776533111 00000
Q ss_pred Hh-hhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCC
Q 019298 275 MK-KYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTG 335 (343)
Q Consensus 275 l~-~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~ 335 (343)
.. ......+.++...+.++ .+++....++++ .+++++++++.+.+.|+.+||+.+..+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 285 (382)
T 4hvk_A 224 GGQENGLRSGSENVPSIVGF-GKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPE 285 (382)
T ss_dssp SCTGGGTSCSCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSS
T ss_pred CCCcCccccCCcCHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCcc
Confidence 00 00011234455555555 444443233444 88899999999999999998988755553
No 119
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.95 E-value=1e-26 Score=211.61 Aligned_cols=271 Identities=10% Similarity=0.077 Sum_probs=194.5
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-C-CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-T-AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~-~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
++++|+.| | .+.++.+.+++.+.+. +.|+. . .+..++|+.++++++ .+.+++++++|+|+++++
T Consensus 4 ~~~~~~~g-p-----~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~~~g~t~a~ 69 (366)
T 1m32_A 4 NYLLLTPG-P-----LTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALAT----ASEGYTSVLLQGSGSYAV 69 (366)
T ss_dssp -CEECSSS-S-----CCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHC----SSSSEEEEEEESCHHHHH
T ss_pred ccccccCC-C-----cCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhC----CCCcCcEEEEecChHHHH
Confidence 35888888 3 3467888888776431 22321 1 577899999999983 122345899999999999
Q ss_pred HHHHHHhcCCCCeEEEeC-CCCcc-hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--CceEEEEeCCCCCcccc
Q 019298 114 DVAMALLSRPGANILLPR-PGFPI-YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNV 189 (343)
Q Consensus 114 ~~~~~~l~~~gd~vl~~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~ 189 (343)
..+++++.++||+|++.+ ++|+. +...+...|.+++.++++. ++.+|+++|++++++ +++++++++|+||||.+
T Consensus 70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~ 147 (366)
T 1m32_A 70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGML 147 (366)
T ss_dssp HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEE
T ss_pred HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCccee
Confidence 999999999999988776 55654 5567778899999998753 456899999998875 47888999999999999
Q ss_pred cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (343)
Q Consensus 190 ~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~ 269 (343)
++ +++|.++|++||+++|+|++|+..... .. +...+.+++++|+||+++. +.++||+++++
T Consensus 148 ~~---l~~i~~l~~~~~~~li~Dea~~~~~~~----~~---~~~~~~di~~~s~~K~~~~-~~g~G~~~~~~-------- 208 (366)
T 1m32_A 148 NP---IDEVGALAHRYGKTYIVDAMSSFGGIP----MD---IAALHIDYLISSANKCIQG-VPGFAFVIARE-------- 208 (366)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTTTTTSC----CC---TTTTTCSEEEEESSSTTCC-CSSEEEEEEEH--------
T ss_pred cC---HHHHHHHHHHcCCEEEEECCccccCcC----cc---ccccCccEEEecCcccccC-CCceEEEEECH--------
Confidence 88 678889999999999999999854321 11 1222355999999998633 23479999964
Q ss_pred HHHHHHhhhh------------------cc-ccCcchHHHHHHHhccchhhHHH---HHHHHHHHHHHHHHHHhhcCCCC
Q 019298 270 KVVERMKKYF------------------DI-LGDPATFIQVCIMYGCLSTIMQI---MIHGNFLENFAGSCVPSYKLIPE 327 (343)
Q Consensus 270 ~~~~~l~~~~------------------~~-~~~~~~~~~~a~~~~~l~~~~~~---l~~~~~~~~~~~~~~~~L~~~~g 327 (343)
+++++++... .. .++++...+.++ .+++....++ -+.+++++++++.+.+.|+++ |
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~ 286 (366)
T 1m32_A 209 QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAF-AQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-G 286 (366)
T ss_dssp HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHH-HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHH-HHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-C
Confidence 4555443210 00 135566666555 5555443333 337888899999999999888 7
Q ss_pred ceeeCC---CCceEeeecC
Q 019298 328 LINFKS---TGSSLKYLDL 343 (343)
Q Consensus 328 ~~~~~~---~~g~~~~~~l 343 (343)
+.+..+ .+++++|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~ 305 (366)
T 1m32_A 287 FNTLLDDELHSPIITAFYS 305 (366)
T ss_dssp CCBSSCGGGBCSSEEEEEC
T ss_pred CeeccCchhcCceEEEEEc
Confidence 776554 4677888753
No 120
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.95 E-value=8.2e-27 Score=213.76 Aligned_cols=258 Identities=12% Similarity=0.097 Sum_probs=186.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCC--CcEEEecChHHHHHHHHHHhcCCCCe
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTP--NDVFVTSGCTQAIDVAMALLSRPGAN 126 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~~~g~~~al~~~~~~l~~~gd~ 126 (343)
.++++.+.+++.+.+.. .+.+ .....++++.+++++ +.++ +++++|+|+++++. ++..++++||+
T Consensus 11 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~------~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~ 79 (384)
T 3zrp_A 11 TTIKEDVLVAGLENNVG----FTSKEFVEALAYSLKGLRYVM------GASKNYQPLIIPGGGTSAME-SVTSLLKPNDK 79 (384)
T ss_dssp SCCCHHHHHHTTCCSCC----TTSHHHHHHHHHHHHHHHHHH------TCCTTSEEEEEESCHHHHHH-HGGGGCCTTCE
T ss_pred CCCCHHHHHHhhccccc----cccHHHHHHHHHHHHHHHHHh------CCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCE
Confidence 56788888877665432 1221 223456677777776 3344 88999999999999 99999999999
Q ss_pred EEEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHh
Q 019298 127 ILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETAN 203 (343)
Q Consensus 127 vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 203 (343)
|++++|+|.+ +...++..|.+++.++++. ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|+
T Consensus 80 vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~ 154 (384)
T 3zrp_A 80 ILVVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIR 154 (384)
T ss_dssp EEEECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHG
T ss_pred EEEecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHH
Confidence 9999999965 5566677899999998764 456899999999987 7899999999999999987 678899999
Q ss_pred hcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHH--------
Q 019298 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM-------- 275 (343)
Q Consensus 204 ~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l-------- 275 (343)
+||+++|+|++|...... ..+ ...+..+++.|+||+++. +.++||+++++ ++++++
T Consensus 155 ~~~~~li~D~a~~~~~~~----~~~---~~~~~d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~ 218 (384)
T 3zrp_A 155 KYVELIVVDGVSSVGAEE----VKA---EEWNVDVYLTASQKALGS-AAGLGLLLLSP--------KALSILDSQNSIAG 218 (384)
T ss_dssp GGEEEEEEECTTTTTTSC----CCT---TTTTCSEEEEETTSTTCC-CSSEEEEEECH--------HHHHHHHHCCCSCC
T ss_pred hcCCEEEEECcccccCcc----ccc---cccCCCEEEecCcccccC-CCceEEEEECH--------HHHHHhcCCCCCCc
Confidence 999999999998853211 111 222345999999998743 24489999853 566665
Q ss_pred -----hhhh----------ccc-cCcchHHHHHHHhccchhhHHH-H-HHHHHHHHHHHHHHHhhcCCCCceeeCCC---
Q 019298 276 -----KKYF----------DIL-GDPATFIQVCIMYGCLSTIMQI-M-IHGNFLENFAGSCVPSYKLIPELINFKST--- 334 (343)
Q Consensus 276 -----~~~~----------~~~-~~~~~~~~~a~~~~~l~~~~~~-l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~--- 334 (343)
.... ... +.++...+.++ .+++...... + +.+++++++++.+.+.|+++ |+.+..+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 296 (384)
T 3zrp_A 219 YYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQL-AEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPES 296 (384)
T ss_dssp STTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGG
T ss_pred ccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccc
Confidence 1111 111 24455555544 4444432222 2 38888999999999999988 88876666
Q ss_pred -CceEeeec
Q 019298 335 -GSSLKYLD 342 (343)
Q Consensus 335 -~g~~~~~~ 342 (343)
+++++|++
T Consensus 297 ~~~~~~~~~ 305 (384)
T 3zrp_A 297 YSNTVTGVI 305 (384)
T ss_dssp BCSSEEEEE
T ss_pred cCccEEEEE
Confidence 56776664
No 121
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.95 E-value=4.5e-26 Score=208.63 Aligned_cols=263 Identities=14% Similarity=0.064 Sum_probs=181.9
Q ss_pred cc-ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EK-KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~-~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
+. +++|++.+.+. .++++.+++++. .|.. ...+++.++++..+.+|.. +++++++++|++++
T Consensus 26 g~~~v~~~~~~~~~----~~~~~~v~~a~~---------~~~~---~~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a 88 (374)
T 2aeu_A 26 GRDALYDLSGLSGG----FLIDEKDKALLN---------TYIG---SSYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA 88 (374)
T ss_dssp CGGGCEECSSCCCC----CCCCHHHHHHHT---------STTH---HHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred CccceeeecccCCC----CCCCHHHHHHHH---------HhcC---chHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence 55 78999998743 678898888875 1211 1345566666665544432 35789999999999
Q ss_pred HHHHHHHhcCCCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE-EEEeCCCCCccc
Q 019298 113 IDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA-LVIINPGNPCGN 188 (343)
Q Consensus 113 l~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~-i~~~~p~nptG~ 188 (343)
+..+++++ +||+|+++.|+|+++.. .++..|.+++.+ .|++++++. ++++++ +++++|+||||.
T Consensus 89 ~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~ 156 (374)
T 2aeu_A 89 ILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI 156 (374)
T ss_dssp HHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC
T ss_pred HHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC
Confidence 99999988 99999999998876443 567789888776 278999988 778899 899999999996
Q ss_pred ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc
Q 019298 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (343)
Q Consensus 189 ~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~ 268 (343)
+.+++++|.++|++||+++|+|++|+.+..+.....+.... +.+++++|+||. ++|+|+||++++
T Consensus 157 --~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~---~~di~~~S~sK~--l~g~~~G~~~~~-------- 221 (374)
T 2aeu_A 157 --ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKL---GADLVVTSTDKL--MEGPRGGLLAGK-------- 221 (374)
T ss_dssp --CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHH---TCSEEEEETTSS--SSSCSCEEEEEE--------
T ss_pred --CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcccc---CCcEEEecCccc--ccCcceEEEEEC--------
Confidence 66899999999999999999999998764200000001111 234899999999 457899999885
Q ss_pred hHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH-HHH-HHHHHHHH----HHHHHHhhcCC---CCcee-eCCCCce
Q 019298 269 PKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ-IMI-HGNFLENF----AGSCVPSYKLI---PELIN-FKSTGSS 337 (343)
Q Consensus 269 ~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~-~l~-~~~~~~~~----~~~~~~~L~~~---~g~~~-~~~~~g~ 337 (343)
++++++++..... ..+++++.+.++ ..+|..... .++ ..+..+.. ++.+.+.|..+ +|+.+ ..|.|.+
T Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~ 300 (374)
T 2aeu_A 222 KELVDKIYIEGTKFGLEAQPPLLAGI-YRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFV 300 (374)
T ss_dssp HHHHHHHHHHHHTTTCBCCHHHHHHH-HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEE
T ss_pred HHHHHHHHHhhccccCCCCHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEE
Confidence 4788888776542 335677777777 455543211 111 22222222 45555656554 35664 4566666
Q ss_pred Eeee
Q 019298 338 LKYL 341 (343)
Q Consensus 338 ~~~~ 341 (343)
|.|.
T Consensus 301 ~~~~ 304 (374)
T 2aeu_A 301 IKRV 304 (374)
T ss_dssp EEEE
T ss_pred EEee
Confidence 6665
No 122
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.95 E-value=5.6e-26 Score=211.79 Aligned_cols=284 Identities=16% Similarity=0.119 Sum_probs=188.9
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC---CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF---NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
+..++|++.+.+.. .++ .+|.+.+++.+++..... ..|+. ....++++.+++++ ++++++|++++|+
T Consensus 42 g~~ylD~~~~~~~~--~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~~~~~~v~~~~gg 112 (429)
T 1s0a_A 42 GRRLVDGMSSWWAA--IHGYNHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT------PQPLECVFLADSG 112 (429)
T ss_dssp SCEEEESSTTTTTC--TTCBSCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS------CTTCCEEEEESSH
T ss_pred CCEEEEcCccHhhc--cCCCCCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC------CCCCCEEEEeCCH
Confidence 56788998887532 233 589999999998865321 13332 12345666666665 3578999999999
Q ss_pred HHHHHHHHHHhc---C----CCCeEEEeCCCCcchHHHHHhc-C-------------ceeEEeecCC---CCCC-CCCHH
Q 019298 110 TQAIDVAMALLS---R----PGANILLPRPGFPIYELSAAFR-H-------------IEVRHFDLLP---DKGW-EVDLD 164 (343)
Q Consensus 110 ~~al~~~~~~l~---~----~gd~vl~~~p~~~~~~~~~~~~-g-------------~~~~~~~~~~---~~~~-~~d~~ 164 (343)
++++..+++.+. + +||+|++.+|+|+.+...+... + .++..++... ++.+ .+|++
T Consensus 113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 192 (429)
T 1s0a_A 113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV 192 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence 999999998653 2 6899999999998765433221 1 1234444321 1123 47899
Q ss_pred HHHhhhcC--CceEEEEeCC--CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298 165 DIESLADQ--NTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (343)
Q Consensus 165 ~l~~~~~~--~~~~i~~~~p--~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 239 (343)
+|++++++ ....+++++| +||||. ..+.+++++|.++|++||+++|+||+|.++.+.+.. ..+...+...+++
T Consensus 193 ~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~-~~~~~~~~~~d~~- 270 (429)
T 1s0a_A 193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKL-FACEHAEIAPDIL- 270 (429)
T ss_dssp HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE-
T ss_pred HHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchH-HHhhhcCCCCCEE-
Confidence 99998863 3344566677 589996 567888999999999999999999999987554331 1222222222333
Q ss_pred EccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh------hccccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298 240 LGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE 312 (343)
Q Consensus 240 ~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~ 312 (343)
|+||.|+ +| +|+||++++ +++++.+... ...+++.+++++.++ .++|+...+ .+..++++
T Consensus 271 --t~sK~l~-~G~~~iG~~~~~--------~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~-~aal~~~~~-~~~~~~~~ 337 (429)
T 1s0a_A 271 --CLGKALT-GGTMTLSATLTT--------REVAETISNGEAGCFMHGPTFMGNPLACAAA-NASLAILES-GDWQQQVA 337 (429)
T ss_dssp --EECGGGG-TSSSCCEEEEEC--------HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHH-HHHHHHHHT-CHHHHHHH
T ss_pred --Eeccccc-CCCccceEEEeC--------HHHHHHhhcCCCcccccCCCCCCCHHHHHHH-HHHHHHHHh-CCHHHHHH
Confidence 7899987 58 999999985 3677877653 223456788888777 455432111 12567777
Q ss_pred HHHHHHHHhhcCC---CCceeeCCCCceEeeec
Q 019298 313 NFAGSCVPSYKLI---PELINFKSTGSSLKYLD 342 (343)
Q Consensus 313 ~~~~~~~~~L~~~---~g~~~~~~~~g~~~~~~ 342 (343)
++++.+.+.|+++ |++....++ |+|+|++
T Consensus 338 ~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~~~ 369 (429)
T 1s0a_A 338 DIEVQLREQLAPARDAEMVADVRVL-GAIGVVE 369 (429)
T ss_dssp HHHHHHHHHHGGGGGCTTEEEEEEE-TTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEEe-eEEEEEE
Confidence 8888888888764 555533444 5677775
No 123
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.95 E-value=2.9e-27 Score=218.26 Aligned_cols=275 Identities=13% Similarity=0.050 Sum_probs=186.3
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCC----CCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYAPT----AGLPLTRRAIAEYLSRDLPYKLTPNDVFV 105 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Y~~~----~g~~~lr~~ia~~~~~~~~~~~~~~~i~~ 105 (343)
+..+.|.|+.+.+ .++++.+.+++.+++..... ..|... ....++++.+++++ ++++++|++
T Consensus 17 ~~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~ 85 (400)
T 3vax_A 17 RGSHMTYLDAAAT-----TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV------SAEPDELIF 85 (400)
T ss_dssp -----CCCCCCCC-----SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGEEE
T ss_pred ccCCcEEecCCCC-----CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc------CCCCCcEEE
Confidence 3566777877763 35789999999888763210 011111 12345666666665 346789999
Q ss_pred ecChHHHHHHHHHHhc----CCCC-eEEEeCCCCcchHHHHHh---cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298 106 TSGCTQAIDVAMALLS----RPGA-NILLPRPGFPIYELSAAF---RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (343)
Q Consensus 106 ~~g~~~al~~~~~~l~----~~gd-~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 177 (343)
|+|+++++..+++++. ++|| +|+++.++|+++...+.. .|.+++.++++. ++.+|+++|+++++++++++
T Consensus 86 ~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v 163 (400)
T 3vax_A 86 TSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLV 163 (400)
T ss_dssp ESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEE
T ss_pred eCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEE
Confidence 9999999999999987 8999 999999999887665544 588999888754 56789999999999889999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
++++|+||||.+++ +++|.++|+++|+++|+|++|+... ....+... ..+++.|+||.++..| +|++
T Consensus 164 ~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~ 230 (400)
T 3vax_A 164 SLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGAL 230 (400)
T ss_dssp ECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEE
T ss_pred EEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEE
Confidence 99999999999977 5788889999999999999998522 11112111 3489999999876665 6777
Q ss_pred E-EeCCCCCCCchHHHHHHh---hh-hccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceee
Q 019298 258 V-TTDPCGMFRKPKVVERMK---KY-FDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINF 331 (343)
Q Consensus 258 ~-~~~~~~~~~~~~~~~~l~---~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~ 331 (343)
+ ++++........+...+. .. ....+..+...+.++ .+++....++++ .+++++++++.+.+.|+ .+|+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~ 308 (400)
T 3vax_A 231 VTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGL-AEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVN 308 (400)
T ss_dssp EECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHH-HHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEEC
T ss_pred EEecchhccccccccCceecCCCceeeeecCCCCHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEe
Confidence 7 665211100000000000 00 111334455555555 444443233333 88889999999999999 8898876
Q ss_pred CCCC
Q 019298 332 KSTG 335 (343)
Q Consensus 332 ~~~~ 335 (343)
.+++
T Consensus 309 ~~~~ 312 (400)
T 3vax_A 309 GDQD 312 (400)
T ss_dssp SCTT
T ss_pred CCcc
Confidence 6654
No 124
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.95 E-value=2.9e-26 Score=213.85 Aligned_cols=286 Identities=14% Similarity=0.091 Sum_probs=182.5
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++.++||+.+.+. ..++ .+|.+.+++.+++... ..|.+..+..+.++++++++.+.++ .+.++|++++|++++
T Consensus 28 g~~~lD~~~~~~~--~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea 101 (430)
T 3i4j_A 28 GRRYLDGSSGALV--ANIGHGRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEA 101 (430)
T ss_dssp SCEEEETTHHHHT--CTTCBCCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHH
T ss_pred CCEEEECCCchhc--cccCCCCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHH
Confidence 6788999988543 2244 4899999999988753 2344434556777777777776554 467799999999999
Q ss_pred HHHHHHHhc--------CCCCeEEEeCCCCcchHHHHHhcCce---------------eEEeecCCCCC---CCCCHHHH
Q 019298 113 IDVAMALLS--------RPGANILLPRPGFPIYELSAAFRHIE---------------VRHFDLLPDKG---WEVDLDDI 166 (343)
Q Consensus 113 l~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~g~~---------------~~~~~~~~~~~---~~~d~~~l 166 (343)
+..+++.+. ..++.|++.+|+|+++...+...+.. +..++.. +. ...|+++|
T Consensus 102 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 179 (430)
T 3i4j_A 102 TESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKP--DPARNGAEDAEGL 179 (430)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCC--CTTSCHHHHHTHH
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCC--cccchhhHHHHHH
Confidence 999999886 34789999999999877655444332 1222211 11 12356888
Q ss_pred HhhhcC---CceEEEEeCC-CC-Cccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc-CCCCCEEE
Q 019298 167 ESLADQ---NTVALVIINP-GN-PCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILT 239 (343)
Q Consensus 167 ~~~~~~---~~~~i~~~~p-~n-ptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~ 239 (343)
++.++. +..++++++| +| ++|. .++.+++++|.++|++||+++|+||+|.++.+.+.. .....+ +...++
T Consensus 180 e~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~-~~~~~~~~~~~di-- 256 (430)
T 3i4j_A 180 RALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSP-LALSRWSGVTPDI-- 256 (430)
T ss_dssp HHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTTCCCSE--
T ss_pred HHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccch-hhhhhhcCCCCcE--
Confidence 888763 4456666677 56 8887 578888999999999999999999999988665542 222222 222233
Q ss_pred EccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhh--HHHHH-HHHH
Q 019298 240 LGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTI--MQIMI-HGNF 310 (343)
Q Consensus 240 ~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~ 310 (343)
.+|||+++. | +|+||++++ +++++.+... ...+++.++++++++ .++|+.. .++.+ .++.
T Consensus 257 -~t~sK~l~~-G~~r~G~~~~~--------~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~~~~~~~~~~~ 325 (430)
T 3i4j_A 257 -AVLGKGLAA-GYAPLAGLLAA--------PQVYETVMGGSGAFMHGFTYAGHPVSVAAG-LSVLDIVEREDLTGAAKER 325 (430)
T ss_dssp -EEECGGGTT-TSSCCEEEEEC--------HHHHHHHHHTTCBCCCCCTTTTCHHHHHHH-HHHHHHHHHTTHHHHHHHH
T ss_pred -EEEcccccC-CccccEEEEEC--------HHHHHHHhccCCcccccCCCCCCHHHHHHH-HHHHHHHHcccHHHHHHHH
Confidence 368999885 9 999999984 4788888763 334567888988888 5655531 22222 3333
Q ss_pred HHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 311 LENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 311 ~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
.+..++.+.+.+..+|++....+. |+|+|++
T Consensus 326 ~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~~~ 356 (430)
T 3i4j_A 326 GAQLLAGLQALQARFPQMMQVRGT-GLLLGVV 356 (430)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEE
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEE
Confidence 333444444444456666654444 4566554
No 125
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.95 E-value=9.2e-27 Score=214.69 Aligned_cols=284 Identities=17% Similarity=0.089 Sum_probs=188.8
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
+..++||+.+.+. +.++ +++.+.+++.+++..... ..| +.....++++.+++++ ++++++|++++|++
T Consensus 44 g~~~ld~~~~~~~--~~~g~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~------~~~~~~v~~~~gg~ 114 (395)
T 1vef_A 44 GNEYIDCVGGYGV--ANLGHGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL------PPELNRVFPVNSGT 114 (395)
T ss_dssp SCEEEESSHHHHT--CTTCBTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS------CTTEEEEEEESSHH
T ss_pred CCEEEEccCcccc--ccCCCCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc------CCCcCEEEEcCcHH
Confidence 5678899888643 1244 789999999998865321 123 2223445555555554 34678999999999
Q ss_pred HHHHHHHHHhc--CCCCeEEEeCCCCcch-HHHHHhcCceeEE---eecCCCCC--CCCCHHHHHhhhcCCceEEEEeCC
Q 019298 111 QAIDVAMALLS--RPGANILLPRPGFPIY-ELSAAFRHIEVRH---FDLLPDKG--WEVDLDDIESLADQNTVALVIINP 182 (343)
Q Consensus 111 ~al~~~~~~l~--~~gd~vl~~~p~~~~~-~~~~~~~g~~~~~---~~~~~~~~--~~~d~~~l~~~~~~~~~~i~~~~p 182 (343)
+++..+++++. .+|+.|++.+|+|+.. ...+...|.+... .++..+.. ...|+++|++++++++++++++.+
T Consensus 115 ~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~ 194 (395)
T 1vef_A 115 EANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPV 194 (395)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSE
T ss_pred HHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCc
Confidence 99999998764 5788999999999654 4455556654211 11110000 014899999999877777765555
Q ss_pred CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 183 GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 183 ~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
+||||.+. +.+++++|.++|++||+++|+||+|.++.+.+... .+...+...+++ ||||.|+. |+|+||+++++
T Consensus 195 ~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~ 269 (395)
T 1vef_A 195 QGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GVPLGVAVMRE 269 (395)
T ss_dssp ETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TSSCEEEEEEH
T ss_pred cCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CCceEEEEehH
Confidence 78999875 68889999999999999999999999765443321 111122122333 88999987 99999999963
Q ss_pred CCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee--eCCCCceE
Q 019298 262 PCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN--FKSTGSSL 338 (343)
Q Consensus 262 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~--~~~~~g~~ 338 (343)
+++++++... ....+++++.+.++ .++|+.... .+.+++++++++.+.+.|++++. .+ ..+..|+|
T Consensus 270 --------~~~~~l~~~~~~~~~~~~~~~~~a~-~~al~~~~~-~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g~~ 338 (395)
T 1vef_A 270 --------EVARSMPKGGHGTTFGGNPLAMAAG-VAAIRYLER-TRLWERAAELGPWFMEKLRAIPS-PKIREVRGMGLM 338 (395)
T ss_dssp --------HHHHTSCTTSSCCSSTTCHHHHHHH-HHHHHHHHH-HTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEETTE
T ss_pred --------HHHhhhccCCcCCCcCCCHHHHHHH-HHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEEEE
Confidence 5666665421 22446677777776 455543222 12677888899999999988732 21 12345678
Q ss_pred eeec
Q 019298 339 KYLD 342 (343)
Q Consensus 339 ~~~~ 342 (343)
+|++
T Consensus 339 ~~~~ 342 (395)
T 1vef_A 339 VGLE 342 (395)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 126
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.95 E-value=9.8e-27 Score=210.72 Aligned_cols=259 Identities=10% Similarity=0.065 Sum_probs=186.4
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEE
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~ 129 (343)
.++++.+.+++.+.+.. +.|+. ..+..++|+.++++++ ...+++++++|+|+++++..+++++.+ |+|++
T Consensus 9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~ 79 (353)
T 2yrr_A 9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFD----PGEGALVAALAGSGSLGMEAGLANLDR--GPVLV 79 (353)
T ss_dssp CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHC----CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhC----CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence 56788898888776543 22321 2345778888888873 223478999999999999999998876 89999
Q ss_pred eCCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298 130 PRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (343)
Q Consensus 130 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 206 (343)
++|+|+++ ...++..|.+++.++.+. ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~ 154 (353)
T 2yrr_A 80 LVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAG 154 (353)
T ss_dssp EECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHT
T ss_pred EcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcC
Confidence 99999874 455677899999998753 456999999999987 7899999999999999987 568888899999
Q ss_pred cEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhh--------
Q 019298 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKK-------- 277 (343)
Q Consensus 207 ~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~-------- 277 (343)
+++|+|++|+... . ...+..+ +..+++.|++|++ +.+| +||+++++ +++++++.
T Consensus 155 ~~li~D~a~~~~~---~-~~~~~~~---~~d~~~~s~~K~~~~~~g--~G~~~~~~--------~~~~~l~~~~~~~~~~ 217 (353)
T 2yrr_A 155 ALFFLDAVTTLGM---L-PFSMRAM---GVDYAFTGSQKCLSAPPG--LAPIAASL--------EARKAFTGKRGWYLDL 217 (353)
T ss_dssp CEEEEECTTTTTT---S-CCCHHHH---TCSEEECCTTSTTCCCSS--CEEEEECH--------HHHHHCCCCSCSTTCH
T ss_pred CeEEEEcCccccc---c-ccccccc---CceEEEecCcccccCCCc--eEEEEECH--------HHHHHhccCCCccccH
Confidence 9999999996422 1 1122222 2348899999964 4466 69999853 56655541
Q ss_pred --------hhccccCcchHHHHHHHhccchhhHH--HHHHHHHHHHHHHHHHHhhcCCCCceeeCCC--CceEeeec
Q 019298 278 --------YFDILGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLENFAGSCVPSYKLIPELINFKST--GSSLKYLD 342 (343)
Q Consensus 278 --------~~~~~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~--~g~~~~~~ 342 (343)
.....++++...+.++ .+++....+ +-+.+++++++++.+.+.|+++ |+.+..+. +++++|++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 292 (353)
T 2yrr_A 218 ARVAEHWERGGYHHTTPVLLHYAL-LEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVR 292 (353)
T ss_dssp HHHHHHHTTCCCSSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEE
T ss_pred HHHhhhhhcCCCCCCCCHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEE
Confidence 0111335566666555 444443222 2237888999999999999888 88865554 56666664
No 127
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.95 E-value=3.1e-26 Score=211.08 Aligned_cols=259 Identities=10% Similarity=0.064 Sum_probs=189.6
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeE
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANI 127 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~v 127 (343)
.++++.+.+++.+.+. ..|.+. ....++|+.+++++ +.+++ +|++|+|+++++..++++++++||+|
T Consensus 27 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~v 96 (396)
T 2ch1_A 27 SNCSKRVLTAMTNTVL----SNFHAELFRTMDEVKDGLRYIF------QTENRATMCVSGSAHAGMEAMLSNLLEEGDRV 96 (396)
T ss_dssp CCCCHHHHHHTTSCCC----CTTCHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhccccc----cCCChhHHHHHHHHHHHHHHHh------CCCCCcEEEECCcHHHHHHHHHHHhcCCCCeE
Confidence 5567888887766432 235432 23678999999999 44667 89999999999999999999999999
Q ss_pred EEeCCCCcchH--HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 128 LLPRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 128 l~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
++++|+|..+. ..++..|.+++.++++. ++.+|++++++++++ ++++|++++|+||||.+++ +++|.++|++
T Consensus 97 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~ 171 (396)
T 2ch1_A 97 LIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQ 171 (396)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHH
Confidence 99999999884 36788899999998753 567999999999987 7899999999999999988 6788888999
Q ss_pred cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh------
Q 019298 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------ 278 (343)
Q Consensus 205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~------ 278 (343)
+|+++|+|++|... .. +..+. ..+..+++.|++|.++. +.++|++++++ ++++.++..
T Consensus 172 ~~~~li~Dea~~~g---~~-~~~~~---~~~~d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~~ 235 (396)
T 2ch1_A 172 HDCLLIVDAVASLC---GV-PFYMD---KWEIDAVYTGAQKVLGA-PPGITPISISP--------KALDVIRNRRTKSKV 235 (396)
T ss_dssp TTCEEEEECTTTBT---TB-CCCTT---TTTCCEEECCCC-CCCC-CSSCEEEEECH--------HHHHHHHTCSSCCSC
T ss_pred cCCEEEEEcccccc---CC-ccchh---hcCcCEEEEcCCccccC-CCCeEEEEECH--------HHHHhhhhccCcccc
Confidence 99999999999842 11 11222 22234778999997543 24469998853 566665431
Q ss_pred ------------------hccccCcchHHHHHHHhccchhh-HHHH-HHHHHHHHHHHHHHHhhcCCCCceeeCCCCc--
Q 019298 279 ------------------FDILGDPATFIQVCIMYGCLSTI-MQIM-IHGNFLENFAGSCVPSYKLIPELINFKSTGS-- 336 (343)
Q Consensus 279 ------------------~~~~~~~~~~~~~a~~~~~l~~~-~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g-- 336 (343)
....++++...+.++ .++|... .+.+ +.+++++++++.+.+.|+++ |+.+..++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 313 (396)
T 2ch1_A 236 FYWDLLLLGNYWGCYDEPKRYHHTVASNLIFAL-REALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHR 313 (396)
T ss_dssp GGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGB
T ss_pred eEechHHHHHhhhhhcccCCCCCCCcHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCcccc
Confidence 011234566666666 4555432 1223 37888999999999999988 8887666653
Q ss_pred --eEeeec
Q 019298 337 --SLKYLD 342 (343)
Q Consensus 337 --~~~~~~ 342 (343)
.++|++
T Consensus 314 ~~~~~~~~ 321 (396)
T 2ch1_A 314 LPTVTGIM 321 (396)
T ss_dssp CTTEEEEE
T ss_pred CCceEEEE
Confidence 366654
No 128
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.94 E-value=2.1e-26 Score=214.74 Aligned_cols=260 Identities=14% Similarity=0.077 Sum_probs=174.8
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---------CCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---------GLPLTRRAIAEYLSRDLPYKLTPNDVFV 105 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---------g~~~lr~~ia~~~~~~~~~~~~~~~i~~ 105 (343)
.+.+.|+.+.+ .++++.+++++.+++.. ...|+... ...++|+.+++++ ++++++|++
T Consensus 17 ~~~~~Ld~~~~-----~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~ 83 (432)
T 3a9z_A 17 NRKVYMDYNAT-----TPLEPEVIQAVTEAMKE--AWGNPSSSYVAGRKAKDIINTARASLAKMI------GGKPQDIIF 83 (432)
T ss_dssp -CCEECBTTTC-----CCCCHHHHHHHHHHHHH--CCSCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEE
T ss_pred CCcEEeeCCcc-----CCCCHHHHHHHHHHHHH--hcCCCccCcHHHHHHHHHHHHHHHHHHHHc------CCCcCeEEE
Confidence 46788888873 26789999999998764 22344321 1258999999988 457789999
Q ss_pred ecChHHHHHHHHHHhc--------CCCCeEEEeCCCCcch-----------------HHHHHhcCceeEEeecCCCCCCC
Q 019298 106 TSGCTQAIDVAMALLS--------RPGANILLPRPGFPIY-----------------ELSAAFRHIEVRHFDLLPDKGWE 160 (343)
Q Consensus 106 ~~g~~~al~~~~~~l~--------~~gd~vl~~~p~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~~~ 160 (343)
|+|+++++..+++++. ++||+|+++.|+|..+ ...++..|.+++.++++.+ ++.
T Consensus 84 ~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~ 162 (432)
T 3a9z_A 84 TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQ 162 (432)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSS
T ss_pred eCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCC
Confidence 9999999999999886 5899999999999875 3444557899999987642 457
Q ss_pred CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC----------cEEEEccCCCccccCCCCCCcccc
Q 019298 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK----------TLVIADEVYGHLVFGDKPFVPMGV 230 (343)
Q Consensus 161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~----------~~~i~D~ay~~~~~~~~~~~~~~~ 230 (343)
+|+++|+++++++++++++++|+||||.+++. ++|.++|++++ +++|+|++|+.+. ....+..
T Consensus 163 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~---~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~~~ 235 (432)
T 3a9z_A 163 VEVEDILAAVRPTTCLVTIMLANNETGVIMPI---SEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDVED 235 (432)
T ss_dssp CCHHHHHHTCCTTEEEEECCSBCTTTCBBCCH---HHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCHHH
T ss_pred cCHHHHHHhccCCceEEEEECcccCcccccCH---HHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccChhh
Confidence 89999999998889999999999999999886 46777888988 9999999997632 1112222
Q ss_pred cCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhH
Q 019298 231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIM 302 (343)
Q Consensus 231 ~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~ 302 (343)
.. ..+++.|+||.+ |.|+||+++++... ...++.. ....+.++...+.++ .+++....
T Consensus 236 ~~---~d~~~~s~~K~~---g~~~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~aal~~~~ 301 (432)
T 3a9z_A 236 LG---VDFLTIVGHKFY---GPRIGALYVRGVGK-------LTPLYPMLFGGGQERNFRPGTENTPMIAGL-GKAADLVS 301 (432)
T ss_dssp HC---CSEEEEEGGGTT---CCSCEEEEETTBTT-------TBCCCCSCCSSCGGGGTSCSCCCHHHHHHH-HHHHHHHH
T ss_pred cC---CCEEEEehhHhc---CCcceEEEEccccc-------cCCcCceeecCCccccccCCCcCHHHHHHH-HHHHHHHH
Confidence 22 226789999986 35799999965320 1111110 111345566666555 45554333
Q ss_pred HHHH-HHHHHHHHHHHHHHhhcCCCCce
Q 019298 303 QIMI-HGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 303 ~~l~-~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
++++ .+++++++++.+.+.|++++|+.
T Consensus 302 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 329 (432)
T 3a9z_A 302 ENCETYEAHMRDIRDYLEERLEAEFGKR 329 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 3444 78888999999999988755554
No 129
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.94 E-value=2.1e-26 Score=215.99 Aligned_cols=272 Identities=15% Similarity=0.105 Sum_probs=186.0
Q ss_pred ccceeEeccC-CCCCCCCCCCcHHHHHHHHHHH---hcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 34 EKKVISLAMG-DPTVHSCFHTTHVATEAVAEAL---LSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 34 ~~~~i~l~~g-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
...+|+|+.| +++ ++.++.+.++..... .+.....|+ ..|.+ +++++++++.+.+| .+++++++|+
T Consensus 88 ~~~~i~l~~g~~~~----~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g----~~~~i~~~sG 157 (464)
T 1ibj_A 88 STLLVNLDNKFDPF----DAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDK----ADRAFCFTSG 157 (464)
T ss_dssp HHHHTCCCCSSCTT----CCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHT----CSEEEEESSH
T ss_pred CCeEEECCCCCCCC----CCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhC----CCeEEEECCH
Confidence 3457889887 533 555665655544321 112234676 35666 78888888777655 3478888888
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCC
Q 019298 110 TQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~np 185 (343)
++++..++. ++++||+|++++|+|..+... ++..|.+++.++.. |+++++++++++++++++++|+||
T Consensus 158 t~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~Np 229 (464)
T 1ibj_A 158 MAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNP 229 (464)
T ss_dssp HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTT
T ss_pred HHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCC
Confidence 999998885 778999999999999988654 45678888888652 799999999888999999999999
Q ss_pred cccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCC-CCcEEEEEEeCCCC
Q 019298 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCG 264 (343)
Q Consensus 186 tG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~~~ 264 (343)
||.+++ +++|+++|++||+++|+|++|..... ..++. .+++++++|+||.|+.+ |+|+||+++++
T Consensus 230 tG~v~~---l~~i~~la~~~gi~livDea~~~g~~----~~~~~----~~~div~~S~sK~~~g~~Gl~~G~l~~~~--- 295 (464)
T 1ibj_A 230 RQQISD---IRKISEMAHAQGALVLVDNSIMSPVL----SRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKG--- 295 (464)
T ss_dssp TCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTT----CCGGG----TTCSEEEEETTTTTTCSSCCCCEEEEECS---
T ss_pred CCEeec---HHHHHHHHHHcCCEEEEECCCccccc----CChhh----cCCEEEEECCcccccCCCCCcEEEEEECh---
Confidence 999985 78889999999999999999985321 11221 24679999999998764 89999999853
Q ss_pred CCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHH----------HHhhcCCCCceeeC
Q 019298 265 MFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSC----------VPSYKLIPELINFK 332 (343)
Q Consensus 265 ~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~----------~~~L~~~~g~~~~~ 332 (343)
++++++++.... ..+..+++.+.++ ...|......++ ..+...+..+.+ .+.|.++|++.+..
T Consensus 296 ----~~l~~~l~~~~~~~g~~~~~~~~~a~-~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~ 370 (464)
T 1ibj_A 296 ----EKLAKEVYFLQNSEGSGLAPFDCWLC-LRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHF 370 (464)
T ss_dssp ----HHHHHHHHHHHHHTTCBCCHHHHHHH-HHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHT
T ss_pred ----HHHHHHHHHHHHhcCCCCCHHHHHHH-HhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHh
Confidence 357777776653 2345677777776 444443222222 111122222222 33455566777555
Q ss_pred CC---CceEeeec
Q 019298 333 ST---GSSLKYLD 342 (343)
Q Consensus 333 ~~---~g~~~~~~ 342 (343)
++ .|.++|++
T Consensus 371 ~~~~g~g~~~~~~ 383 (464)
T 1ibj_A 371 SQAKGAGSVFSFI 383 (464)
T ss_dssp TTCSCCCSEEEEE
T ss_pred ccCCCCceEEEEE
Confidence 54 24566654
No 130
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.94 E-value=5e-27 Score=213.48 Aligned_cols=242 Identities=12% Similarity=0.019 Sum_probs=169.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC--eEEEeCCCCcchHH---HHHhcC
Q 019298 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA--NILLPRPGFPIYEL---SAAFRH 145 (343)
Q Consensus 71 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd--~vl~~~p~~~~~~~---~~~~~g 145 (343)
..|++..+..+|++.++++++ .+..++++|+++++..++++++.+|| .|+++.++|..... .+...|
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~--------~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g 112 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLG--------MDDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHP 112 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSS
T ss_pred ccccCChHHHHHHHHHHHHhC--------CCcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccC
Confidence 468776788999999999983 24445557788899999999988888 67776666543322 345568
Q ss_pred ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc-ccccCHHHHHHHHHHHhhcCcEEEEccCCCcc--ccCC
Q 019298 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC-GNVYSYQHLQKLAETANKLKTLVIADEVYGHL--VFGD 222 (343)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~--~~~~ 222 (343)
.+++.++. +++.+|+++++++. +++++++++||||| |.+++.+++++|+++|++||+++|+|++|... .+.+
T Consensus 113 ~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 187 (357)
T 3lws_A 113 IETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE 187 (357)
T ss_dssp CEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred cEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence 88877763 34579999999873 38899999999998 99999999999999999999999999998721 1112
Q ss_pred CCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-c--cCcchHHHHHHHhccch
Q 019298 223 KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-L--GDPATFIQVCIMYGCLS 299 (343)
Q Consensus 223 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~--~~~~~~~~~a~~~~~l~ 299 (343)
.....+. ... . +++.|+||+|+.++ .||++++ ++++++++..... . .......+.++ ...|.
T Consensus 188 ~~~~~~~--~~~-d-~~~~s~sK~~~~~~--gg~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 252 (357)
T 3lws_A 188 KTAAEIA--GLF-D-SIYISFYKGLGGIA--GAILAGP--------AAFCQTARIWKRRYGGDLISLYPYIVSA-DYYYE 252 (357)
T ss_dssp CCHHHHH--TTS-S-EEEEESSSTTCCSS--CEEEEEC--------HHHHHHHHHHHHHTTCCCSCCHHHHHHH-HHHHH
T ss_pred CChHHHH--hcC-C-EEEEeccccCCCCc--eEEEEcC--------HHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHH
Confidence 2111111 111 1 45889999984433 2898874 4788887755321 1 11122223333 23332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCcee-eCCCCceEeeecC
Q 019298 300 TIMQIMIHGNFLENFAGSCVPSYKLIPELIN-FKSTGSSLKYLDL 343 (343)
Q Consensus 300 ~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~-~~~~~g~~~~~~l 343 (343)
.+.+..+++.++++.+.+.|+++||+.+ ..|++++|+|+++
T Consensus 253 ---~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~ 294 (357)
T 3lws_A 253 ---LRKDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHF 294 (357)
T ss_dssp ---HHTTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEE
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEe
Confidence 3444455578888899999999989987 4688899999863
No 131
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.94 E-value=2.9e-26 Score=212.05 Aligned_cols=276 Identities=16% Similarity=0.135 Sum_probs=191.9
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---CCHH--HHH-----HHHHHHhhhCCCCCCCCcE
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---GLPL--TRR-----AIAEYLSRDLPYKLTPNDV 103 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g~~~--lr~-----~ia~~~~~~~~~~~~~~~i 103 (343)
+.+.++|+.|.+. + ++.+.+++.+++.+.....|+... |.+. +++ .+++++ | .++++|
T Consensus 22 ~~~~i~~~~~~~~----~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~----g--~~~~~i 89 (407)
T 2dkj_A 22 QREGLELIASENF----V--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALF----G--AAWANV 89 (407)
T ss_dssp HHTSEECCTTCCC----C--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----T--CSEEEC
T ss_pred hhcceeeccCCCC----C--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHh----C--CCcceE
Confidence 4578999999832 3 899999999887643334565432 4443 333 455555 3 345556
Q ss_pred EEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH---HHHHhcCceeEEeecCC-CCCCCCCHHHHHhhhcC-CceEEE
Q 019298 104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLADQ-NTVALV 178 (343)
Q Consensus 104 ~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~~~-~~~~i~ 178 (343)
++++| ++++..+++++.++||+|++++|+|+.+. ..+...|..+..+++.. ++++.+|++++++.+++ ++++++
T Consensus 90 ~~~sG-t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~ 168 (407)
T 2dkj_A 90 QPHSG-SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIV 168 (407)
T ss_dssp CCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEE
T ss_pred Eecch-HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEE
Confidence 66666 55999999999999999999999998873 44455565444444432 23578999999999874 789999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (343)
Q Consensus 179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i 257 (343)
+++|+|| ...+ +++|.++|++||+++|+|++|.. +.+.+...... . ..+++++|+||. ++|.|+||+
T Consensus 169 ~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di~~~s~sK~--l~g~~~G~~ 236 (407)
T 2dkj_A 169 AGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHVVTSTTHKT--LRGPRGGLI 236 (407)
T ss_dssp ECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSEEEEESSGG--GCCCSCEEE
T ss_pred EeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccEEEEecccc--CCCCCceEE
Confidence 9999998 4433 78899999999999999999997 55444322111 1 245899999996 458889999
Q ss_pred EEeCCCCCCCchHHHHHHhhhhcc--ccCcchHHHHHHHhccchhh-HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeC-
Q 019298 258 VTTDPCGMFRKPKVVERMKKYFDI--LGDPATFIQVCIMYGCLSTI-MQIMI-HGNFLENFAGSCVPSYKLIPELINFK- 332 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~~l~~~-~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~- 332 (343)
++++ ++++++++..... ...++.....++ .+++... ..+++ .+++++++++.+.+.|+++ |+.+..
T Consensus 237 ~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 307 (407)
T 2dkj_A 237 LSND-------PELGKRIDKLIFPGIQGGPLEHVIAGK-AVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTG 307 (407)
T ss_dssp EESC-------HHHHHHHHHHHTTTTCSSCCHHHHHHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGG
T ss_pred EECC-------HHHHHHHHhhhcccccCCCcHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecC
Confidence 9852 4678877765432 223333333233 4444432 23333 8888999999999999988 888654
Q ss_pred CCCceEeeecC
Q 019298 333 STGSSLKYLDL 343 (343)
Q Consensus 333 ~~~g~~~~~~l 343 (343)
+.+|+|+|+++
T Consensus 308 ~~~~~~~~~~~ 318 (407)
T 2dkj_A 308 GTDNHLFLVDL 318 (407)
T ss_dssp SCSSSEEEEEC
T ss_pred CCCceEEEEEC
Confidence 46888998864
No 132
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.94 E-value=6.3e-26 Score=212.08 Aligned_cols=285 Identities=14% Similarity=0.044 Sum_probs=187.4
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~ 110 (343)
+++.++||+.+.+.. .++ .+|.+.+++.+++... ..|....+..++++++++++.+.++. .. +++++++|++
T Consensus 41 ~g~~~lD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~v~~~~ggs 114 (439)
T 3dxv_A 41 NGRELIDLSGAWGAA--SLGYGHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPG--EGTHKIWFGHSGS 114 (439)
T ss_dssp TSCEEEESSTTTTTC--TTCBSCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTC--TTTEEEEEESSHH
T ss_pred CCCEEEECCCchhhc--cCCCCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCC--CCCCEEEEeCCHH
Confidence 367889999998652 244 7899999999998754 34554556778888888888775543 34 7999999999
Q ss_pred HHHHHHHHHh--cCCCCeEEEeCCCCcchHHHHHhcCce-e--------------EEeecCCCCCCCC-----CHHHHHh
Q 019298 111 QAIDVAMALL--SRPGANILLPRPGFPIYELSAAFRHIE-V--------------RHFDLLPDKGWEV-----DLDDIES 168 (343)
Q Consensus 111 ~al~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~g~~-~--------------~~~~~~~~~~~~~-----d~~~l~~ 168 (343)
+++..+++.+ ..+++.|++.+|+|+.+...+...+.. . ..++.. +.+.. |+++|++
T Consensus 115 ea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~ 192 (439)
T 3dxv_A 115 DANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTE 192 (439)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHH
Confidence 9999999885 235678888999997665554444322 1 122211 11111 6899999
Q ss_pred hh----cCCceEEEEeCCCCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccC
Q 019298 169 LA----DQNTVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243 (343)
Q Consensus 169 ~~----~~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 243 (343)
++ .+++++++++.++|++|.+.+ .+.+++|.++|++||+++|+||+|.++...+.. .....++...+++ ||
T Consensus 193 ~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~-~~~~~~~~~~di~---s~ 268 (439)
T 3dxv_A 193 KLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRL-HCFEHEGFVPDIL---VL 268 (439)
T ss_dssp HHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSS-SGGGGTTCCCSEE---EE
T ss_pred HHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhcCCCCCEE---EE
Confidence 88 345566666666788888754 455999999999999999999999987554431 1222222222333 89
Q ss_pred ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhh
Q 019298 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSY 322 (343)
Q Consensus 244 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L 322 (343)
||+|+ +|+|+||++++ +++++.+.... ..++ .+++++.++ .++|..... -+..++++++++.+.+.|
T Consensus 269 sK~~~-~G~riG~~~~~--------~~~~~~~~~~~~~~t~-~~~~~~~aa-~aal~~~~~-~~~~~~~~~~~~~~~~~l 336 (439)
T 3dxv_A 269 GKGLG-GGLPLSAVIAP--------AEILDCASAFAMQTLH-GNPISAAAG-LAVLETIDR-DDLPAMAERKGRLLRDGL 336 (439)
T ss_dssp CGGGG-TTSCCEEEEEE--------HHHHTSCSSSSCCTTT-TCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHH
T ss_pred cchhc-CCcceEEEEEC--------HHHHhhhcCCCcCCCc-ccHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 99998 59999999985 36777666542 2345 788888777 455442111 114555555555555555
Q ss_pred cC----CCCceeeCCCCceEeeec
Q 019298 323 KL----IPELINFKSTGSSLKYLD 342 (343)
Q Consensus 323 ~~----~~g~~~~~~~~g~~~~~~ 342 (343)
.+ ++.+.... ..|.|+|++
T Consensus 337 ~~~~~~~~~~~~~~-~~g~~~~~~ 359 (439)
T 3dxv_A 337 SELAKRHPLIGDIR-GRGLACGME 359 (439)
T ss_dssp HHHHHHCTTEEEEE-EETTEEEEE
T ss_pred HHHHHhCCCeEEEE-EEEEEEEEE
Confidence 43 45444433 345666654
No 133
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.94 E-value=1.2e-26 Score=211.01 Aligned_cols=270 Identities=12% Similarity=-0.006 Sum_probs=185.0
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~ 115 (343)
..+.+..+. +.++++|.+.+++.+... ...|.+..+..++++.++++++ .+..++++|+++++..
T Consensus 14 ~~~~~~~~~----~~~g~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~g~~a~~~ 78 (359)
T 3pj0_A 14 PYKLGGNGP----RNVGVLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKILG--------KQSAVFFPSGTMAQQI 78 (359)
T ss_dssp SEESSSSSC----CBHHHHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHH
T ss_pred chhhcCCCc----cccCCCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHH
Confidence 334455554 335678888888877433 2457666778999999999983 2334566888899999
Q ss_pred HHHHhcCCCCe--EEEeCCCCcchH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc-ccc
Q 019298 116 AMALLSRPGAN--ILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC-GNV 189 (343)
Q Consensus 116 ~~~~l~~~gd~--vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt-G~~ 189 (343)
++++++.+||. |+++.++|.... ......|.+++.++. +++.+|+++++++ .++++++++++|+||+ |.+
T Consensus 79 a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~ 154 (359)
T 3pj0_A 79 ALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQL 154 (359)
T ss_dssp HHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBC
T ss_pred HHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCccc
Confidence 99999888876 555555543222 222456888888765 3567999999998 7789999999999998 799
Q ss_pred cCHHHHHHHHHHHhhcCcEEEEccCCCcccc--CCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC
Q 019298 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267 (343)
Q Consensus 190 ~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~ 267 (343)
++.+++++|+++|++||+++|+|++|..+.. .+.....+. . ...+++.|+||+++.++ + ||++++
T Consensus 155 ~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~-~~d~~~~s~sK~~~~~~-g-g~~~~~------- 221 (359)
T 3pj0_A 155 PAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---A-LFDSVYVSFYKGIGGIA-G-AILAGN------- 221 (359)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---T-TCSEEEEESSSTTCCSS-C-EEEEEC-------
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---c-cCCEEEEeccccCCCcc-e-EEEECC-------
Confidence 9999999999999999999999999875432 111111111 1 11255679999987663 2 677663
Q ss_pred chHHHHHHhhhhcc---ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceee-CCCCceEeeec
Q 019298 268 KPKVVERMKKYFDI---LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINF-KSTGSSLKYLD 342 (343)
Q Consensus 268 ~~~~~~~l~~~~~~---~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~-~~~~g~~~~~~ 342 (343)
++++++++..... ..........+. ...+. ...+..+++.++++.+.+.|+++||+.+. .|++++|+|++
T Consensus 222 -~~l~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~---~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~ 295 (359)
T 3pj0_A 222 -DDFVQEAKIWKRRYGGDLISLYPYILSA-DYYFE---KRIGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVY 295 (359)
T ss_dssp -HHHHHHHHHHHHHTTCCCSCCHHHHHHH-HHHHH---HHGGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEE
T ss_pred -HHHHHHHHHHHHHhCCCcchhHHHHHHH-HHHHH---HHHHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEE
Confidence 4788888764321 111122222222 22332 22345556788889999999999899874 67888888875
No 134
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.94 E-value=1.1e-25 Score=208.23 Aligned_cols=259 Identities=13% Similarity=0.046 Sum_probs=186.6
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCc-EEEecChHHHHHHHHHHhcCCCCeE
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANI 127 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~-i~~~~g~~~al~~~~~~l~~~gd~v 127 (343)
.++++.+.+++.+.. ...|.+. ....++++.+++++ +.+.++ +++++|+++++..++++++++||+|
T Consensus 22 ~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~V 91 (411)
T 3nnk_A 22 INADPRVLRAMSSQL----IGQYDPAMTHYMNEVMALYRGVF------RTENRWTMLVDGTSRAGIEAILVSAIRPGDKV 91 (411)
T ss_dssp CCCCHHHHHHHTSCC----CCTTCHHHHHHHHHHHHHHHHHH------TCCCSEEEEEESCHHHHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhhccc----cccccHHHHHHHHHHHHHHHHHh------CCCCCcEEEECCCcHHHHHHHHHHhcCCCCEE
Confidence 567888888776543 2223221 12245666666666 234454 7888899999999999999999999
Q ss_pred EEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 128 LLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 128 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
+++.|+|.+ +...++..|.+++.++++ .++.+|+++|++++++ +++++++++|+||||.+.+ +++|.++|++
T Consensus 92 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 166 (411)
T 3nnk_A 92 LVPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEICRR 166 (411)
T ss_dssp EEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EEecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHHHH
Confidence 999999977 888888999999999874 4567899999999986 8999999999999999976 6788888999
Q ss_pred cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-----
Q 019298 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF----- 279 (343)
Q Consensus 205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~----- 279 (343)
||+++|+|++++.... ... ....+..+++.|++|+++. +.++||++++ ++++++++...
T Consensus 167 ~~~~li~Dea~~~~~~----~~~---~~~~~~d~~~~s~~K~l~~-~~g~g~~~~~--------~~~~~~~~~~~~~~~~ 230 (411)
T 3nnk_A 167 YDALFYTDATASLGGN----PLE---TDVWGLDAVSAGMQKCLGG-PSGTSPITLS--------ARMEEAIRRRKCVEEG 230 (411)
T ss_dssp HTCEEEEECTTTBTTB----CCC---TTTTTCSEEECCSTTTTCC-CSSEEEEEEC--------HHHHHHHHTTCCCCGG
T ss_pred cCCEEEEECCcccCCc----ccc---hhccCCcEEEecCccccCC-CCceEEEEEC--------HHHHHHHhhccccccc
Confidence 9999999999875221 111 1222345999999998432 3358999985 36777776532
Q ss_pred --------------------------------ccccCcchHHHHHHHhccchhhHHH-H-HHHHHHHHHHHHHHHhhcCC
Q 019298 280 --------------------------------DILGDPATFIQVCIMYGCLSTIMQI-M-IHGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 280 --------------------------------~~~~~~~~~~~~a~~~~~l~~~~~~-l-~~~~~~~~~~~~~~~~L~~~ 325 (343)
...+..+...+.++ .+++....++ + +.+++++++++.+.+.|+++
T Consensus 231 ~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 309 (411)
T 3nnk_A 231 IRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGA-RECARLILQEGLDYGIARHKLHGDALVKGIQAM 309 (411)
T ss_dssp GCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 01234455555555 4455433333 3 38888999999999999987
Q ss_pred CCceeeCCCC---ceEeeec
Q 019298 326 PELINFKSTG---SSLKYLD 342 (343)
Q Consensus 326 ~g~~~~~~~~---g~~~~~~ 342 (343)
|+.+..+.+ ++++|+.
T Consensus 310 -g~~~~~~~~~~~~~~~~~~ 328 (411)
T 3nnk_A 310 -GLETFGDLKHKMNNVLGVV 328 (411)
T ss_dssp -TCCBCSCGGGBCSSEEEEE
T ss_pred -CCEeCCCcccccccEEEEE
Confidence 787655553 5666654
No 135
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.94 E-value=6.4e-26 Score=210.87 Aligned_cols=278 Identities=15% Similarity=0.091 Sum_probs=188.3
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||+.|.... .++ .+|.+.+++.+++.... .+.. .+..++++.+++.+.+..| .++|++++|+++
T Consensus 55 ~g~~~lD~~~~~~~~--~lG~~~p~v~~ai~~~~~~~~--~~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggte 125 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVT--ALGHCHPALVEALKSQGETLW--HTSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTE 125 (420)
T ss_dssp TCCEEEESSHHHHTC--TTCBTCHHHHHHHHHHHTTCC--CCCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHH
T ss_pred CCCEEEEcccccccc--ccCCCCHHHHHHHHHHHHhcc--cccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHH
Confidence 367788998874221 122 68999999999986532 1211 1233555666666655443 589999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEeCCCCcchHHH-HHhcCce------------eEEeecCCCCCCCCCHHHHHhhh
Q 019298 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELS-AAFRHIE------------VRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 112 al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~-~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
++..+++.+.. +| +.|++++|+|+.+... ....|.+ +..++. .|+++|++++
T Consensus 126 A~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i 198 (420)
T 2pb2_A 126 ANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVM 198 (420)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHC
T ss_pred HHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHh
Confidence 99999998865 67 5999999999776443 3444543 333332 2799999999
Q ss_pred cCCceEEEEeCCCCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC
Q 019298 171 DQNTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249 (343)
Q Consensus 171 ~~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 249 (343)
++++++++++.++|++|. +++.+++++|.++|++||+++|+||+|.++.+.+... .+..++...+++ ||||.++
T Consensus 199 ~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~- 273 (420)
T 2pb2_A 199 DDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG- 273 (420)
T ss_dssp CTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-
T ss_pred ccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-
Confidence 888888888777888884 6899999999999999999999999998876655422 111222223333 6899998
Q ss_pred CCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC---
Q 019298 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI--- 325 (343)
Q Consensus 250 ~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~--- 325 (343)
+|+|+||+++++ ++++.++.. ...+++.+++++.++ .++|+...+ -+..++++++++.+.+.|+++
T Consensus 274 ~G~~iG~~~~~~--------~l~~~l~~~~~~~t~~~~~~~~aa~-~a~L~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~ 343 (420)
T 2pb2_A 274 GGFPVSAMLTTQ--------EIASAFHVGSHGSTYGGNPLACAVA-GAAFDIINT-PEVLQGIHTKRQQFVQHLQAIDEQ 343 (420)
T ss_dssp TTSCCEEEEECH--------HHHTTCC----CCEECCCHHHHHHH-HHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEhH--------HHHHhhcCCCcCcccCcCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 899999999853 566555442 223456788888777 555543221 236677778888888877654
Q ss_pred -CCceeeCCCCceEeeec
Q 019298 326 -PELINFKSTGSSLKYLD 342 (343)
Q Consensus 326 -~g~~~~~~~~g~~~~~~ 342 (343)
|.+....+ .|+|+|++
T Consensus 344 ~~~~~~~~~-~g~~~~v~ 360 (420)
T 2pb2_A 344 FDIFSDIRG-MGLLIGAE 360 (420)
T ss_dssp HCCEEEEEE-ETTEEEEE
T ss_pred CCCeEEEEe-cceEEEEE
Confidence 33333233 36666664
No 136
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.94 E-value=3.5e-25 Score=205.72 Aligned_cols=253 Identities=16% Similarity=0.132 Sum_probs=179.8
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeC
Q 019298 53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPR 131 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~ 131 (343)
.++.+.+++.+++.......|++..|.+++++.+.+.+.+.+|. +++++++|+++++..+++++ +++||+|+++.
T Consensus 14 ~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~----~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~ 89 (418)
T 2c81_A 14 HSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGV----PYCVPTTSGSTALMLALEALGIGEGDEVIVPS 89 (418)
T ss_dssp CCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTC----SEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred CCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCC----CcEEEeCCHHHHHHHHHHHcCCCCcCEEEECC
Confidence 47899999999987665555887777544444444444333332 25677777899999999999 89999999999
Q ss_pred CCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 132 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
|+|..+...++..|.+++.+++++ +++.+|++++++.+++++++|++ +||||.. .++++|.++|+++|+++|+
T Consensus 90 ~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~---~~~~G~~---~~~~~i~~~~~~~~~~li~ 162 (418)
T 2c81_A 90 LTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIP---VHLFGSM---ANMDEINEIAQEHNLFVIE 162 (418)
T ss_dssp SSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECC---BCCTTCC---CCHHHHHHHHHHTTCEEEE
T ss_pred CccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEE---eCCcCCc---ccHHHHHHHHHHCCCEEEE
Confidence 999999999999999999998764 35789999999999877887775 4589987 5678889999999999999
Q ss_pred ccCCCccc-cCCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccc------
Q 019298 212 DEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL------ 282 (343)
Q Consensus 212 D~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~------ 282 (343)
|++|..+. +++... ..+. .+.+.|| ||.++. | |+||+++++ ++++++++......
T Consensus 163 D~a~~~~~~~~~~~~---~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~-------~~l~~~~~~~~~~~~~~~~~ 226 (418)
T 2c81_A 163 DCAQSHGSVWNNQRA---GTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKN-------PRLFELIQQLRADSRVYCDD 226 (418)
T ss_dssp ECTTCTTCEETTEET---TSSS----SEEEEECCTTSSSCS-S-SCEEEEESC-------HHHHHHHHHHHBTTEEECSC
T ss_pred ECcccccCccCCEec---cccc----ceEEEeccCCcccCC-C-CeEEEEECC-------HHHHHHHHHHHHhCcccccc
Confidence 99999875 443221 1122 2777777 999988 8 999999853 45777776543210
Q ss_pred -------cC--c-----------chHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceee-CCCC
Q 019298 283 -------GD--P-----------ATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINF-KSTG 335 (343)
Q Consensus 283 -------~~--~-----------~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~-~~~~ 335 (343)
.. . ....+.++....+ ..+-+..++.+++++.+.+.|.++||+.+. .+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 297 (418)
T 2c81_A 227 SSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQL---QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQ 297 (418)
T ss_dssp GGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTT
T ss_pred ccccccchhhccccccccCcCCCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCC
Confidence 00 0 0111222201111 122236666777788889999988888865 4555
No 137
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.94 E-value=1.2e-25 Score=211.71 Aligned_cols=265 Identities=12% Similarity=0.079 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC----CCCe---E
Q 019298 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----PGAN---I 127 (343)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~gd~---v 127 (343)
+.+.+++.+++.... ..|.+..+..+||++++++++ .+++++|+|+++++..+++++.+ +||. |
T Consensus 55 ~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~v 125 (467)
T 1ax4_A 55 NAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPV 125 (467)
T ss_dssp CCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCE
T ss_pred HHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceE
Confidence 566676666665433 368777788999999999993 37999999999999999999988 9998 9
Q ss_pred EEeCCCCcchHHHHHhcCceeEEeecCC---C-----CCCCCCHHHHHhhhcC----CceEEEEeCCCCCc-ccccCHHH
Q 019298 128 LLPRPGFPIYELSAAFRHIEVRHFDLLP---D-----KGWEVDLDDIESLADQ----NTVALVIINPGNPC-GNVYSYQH 194 (343)
Q Consensus 128 l~~~p~~~~~~~~~~~~g~~~~~~~~~~---~-----~~~~~d~~~l~~~~~~----~~~~i~~~~p~npt-G~~~~~~~ 194 (343)
+++.+.|..+...+...|..++.++... . .++.+|+++|++++++ ++++|++++|+||| |.+++.++
T Consensus 126 iv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~ 205 (467)
T 1ax4_A 126 FISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSN 205 (467)
T ss_dssp EEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHH
T ss_pred EEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhH
Confidence 8887777777777888888887665421 1 1346899999999874 57899999999999 89999999
Q ss_pred HHHHHHHHhhcCcEEEEccCCCc--c--------ccCCCCCCccc-ccCCCCCEEEEccCccccCCC-CCcEEEEEEeCC
Q 019298 195 LQKLAETANKLKTLVIADEVYGH--L--------VFGDKPFVPMG-VFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDP 262 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~--~--------~~~~~~~~~~~-~~~~~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~ 262 (343)
+++|+++|++||+++|+|+++.. . .+.+.....+. ....... +++.|+||.++++ | ||+++++
T Consensus 206 l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G---g~~~~~d- 280 (467)
T 1ax4_A 206 LKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD-ALTMSAKKDPLLNIG---GLVAIRD- 280 (467)
T ss_dssp HHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS-EEEEETTSTTCCSSC---EEEEESS-
T ss_pred HHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc-eEEEeccccCCCCcc---eEEEeCC-
Confidence 99999999999999999998653 1 12222111110 0001111 5678999998765 4 6676643
Q ss_pred CCCCCch-HHHHHHhhhhc------cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCC
Q 019298 263 CGMFRKP-KVVERMKKYFD------ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTG 335 (343)
Q Consensus 263 ~~~~~~~-~~~~~l~~~~~------~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~ 335 (343)
+ ++++++..... .....+.....++ ...+....+ .+..+...++++.+.+.|++ +|+.+..|++
T Consensus 281 ------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~ 351 (467)
T 1ax4_A 281 ------NEEIFTLARQRCVPMEGFVTYGGLAGRDMAAM-VQGLEEGTE-EEYLHYRIGQVKYLGDRLRE-AGIPIQYPTG 351 (467)
T ss_dssp ------CHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHH-HHHHHHTTC-HHHHHHHHHHHHHHHHHHHH-TTCCBCSSCC
T ss_pred ------HHHHHHHHHhhccccccccccCCccchHHHHH-HHHHHHhhh-hhHHHHHHHHHHHHHHHHHh-CCCCcccCCC
Confidence 3 46666654321 1112232222222 112221111 01233334667778888877 4788768899
Q ss_pred ceEeeec
Q 019298 336 SSLKYLD 342 (343)
Q Consensus 336 g~~~~~~ 342 (343)
|+++|++
T Consensus 352 ~~~~~~~ 358 (467)
T 1ax4_A 352 GHAVFVD 358 (467)
T ss_dssp SSEEEEE
T ss_pred ceEEEEe
Confidence 9999986
No 138
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.94 E-value=1.3e-25 Score=207.98 Aligned_cols=217 Identities=14% Similarity=0.091 Sum_probs=162.8
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeecC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLL 154 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~ 154 (343)
..+|++.+++++ ..+++++++|+++++..++++++++||+|+++.|+|..+...+.. .|.+++.++.+
T Consensus 83 ~~~l~~~la~~~--------g~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 154 (414)
T 3ndn_A 83 VSVFEERLRLIE--------GAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD 154 (414)
T ss_dssp HHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred HHHHHHHHHHHH--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC
Confidence 355666666666 246889999999999999999999999999999999988776644 89999888753
Q ss_pred CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
|++++++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....... +. ..
T Consensus 155 -------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~----~~----~~ 216 (414)
T 3ndn_A 155 -------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQ----GF----PL 216 (414)
T ss_dssp -------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC----CG----GG
T ss_pred -------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch----hc
Confidence 799999999989999999999999999955 7788999999999999999998533211 11 11
Q ss_pred CCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHH-HHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHH
Q 019298 235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVE-RMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFL 311 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~ 311 (343)
+..+++.|+||.++.+| +++|++++++ +.+. .++.... .....++....++ ...+ ..+..+.++.
T Consensus 217 g~div~~S~sK~l~~~G~~~~G~vv~~~--------~~~~~~l~~~~~~~g~~~~~~~a~~~-~~~l---~~l~~r~~~~ 284 (414)
T 3ndn_A 217 GVDVVVYSGTKHIDGQGRVLGGAILGDR--------EYIDGPVQKLMRHTGPAMSAFNAWVL-LKGL---ETLAIRVQHS 284 (414)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEECH--------HHHTTHHHHHHHHHCCCCCHHHHHHH-HHHG---GGHHHHHHHH
T ss_pred CCCeEeccCCccccCCCCceEEEEEECH--------HHHHHHHHHHHHHcCCCCCHHHHHHH-HHHH---HHHHHHHHHH
Confidence 23489999999999988 8999999853 3443 5554322 2334455544443 2221 2233366777
Q ss_pred HHHHHHHHHhhcCCCCce-eeCC
Q 019298 312 ENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 312 ~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
.++++.+.+.|+++|++. +..|
T Consensus 285 ~~~a~~l~~~L~~~p~v~~v~~p 307 (414)
T 3ndn_A 285 NASAQRIAEFLNGHPSVRWVRYP 307 (414)
T ss_dssp HHHHHHHHHHHHTCTTEEEEECT
T ss_pred HHHHHHHHHHHhcCCCEeEEECC
Confidence 888899999999888776 4444
No 139
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.94 E-value=4.7e-26 Score=212.58 Aligned_cols=286 Identities=13% Similarity=0.021 Sum_probs=183.7
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
+..++||+.+.+.. .++ .+|.+.+++.+++..... +. ..+..+++..+++.+.+.++ .++++|++++|++++
T Consensus 42 g~~~lD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea 114 (433)
T 1zod_A 42 GRAILDFTSGQMSA--VLGHCHPEIVSVIGEYAGKLDH--LF-SEMLSRPVVDLATRLANITP--PGLDRALLLSTGAES 114 (433)
T ss_dssp CCEEEETTHHHHTC--TTCBTCHHHHHHHHHHHHHCCC--CC-TTCCCHHHHHHHHHHHHHSC--TTCCEEEEESCHHHH
T ss_pred CCEEEEcccchhcc--ccCCCCHHHHHHHHHHHHhCcc--cc-cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHH
Confidence 56788998776431 133 589999999998865321 11 12223445555555554443 457899999999999
Q ss_pred HHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcC------------ceeEEeecCC--CCCC--------CCCHHHHHh
Q 019298 113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFRH------------IEVRHFDLLP--DKGW--------EVDLDDIES 168 (343)
Q Consensus 113 l~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g------------~~~~~~~~~~--~~~~--------~~d~~~l~~ 168 (343)
+..+++.+. ..+++|++.+|+|+++...+.... ..+..++... ...+ .+|+++|++
T Consensus 115 ~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~ 194 (433)
T 1zod_A 115 NEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFD 194 (433)
T ss_dssp HHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHH
Confidence 999998653 235799999999987655433221 1233333211 1111 246899998
Q ss_pred hhcC---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccC
Q 019298 169 LADQ---NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243 (343)
Q Consensus 169 ~~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 243 (343)
.+++ +...+++++| +||||. ..+.+++++|.++|++||+++|+||+|.++.+.+.. ..+...+...+ +.|+
T Consensus 195 ~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~-~~~~~~~~~~d---i~s~ 270 (433)
T 1zod_A 195 LIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTM-FACQRDGVTPD---ILTL 270 (433)
T ss_dssp HHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCS---EEEE
T ss_pred HHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchH-hHHhhcCCCCC---EEEe
Confidence 8863 3345566778 588996 578899999999999999999999999987654431 11121222222 3489
Q ss_pred ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh---ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHH
Q 019298 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF---DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVP 320 (343)
Q Consensus 244 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~ 320 (343)
||+|+. |+|+||++++ +++++.+.... ..+.+.+++++.++ .++|+...+ .+..++++++++.+.+
T Consensus 271 sK~~~~-G~~ig~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~~a~-~aal~~~~~-~~~~~~~~~~~~~l~~ 339 (433)
T 1zod_A 271 SKTLGA-GLPLAAIVTS--------AAIEERAHELGYLFYTTHVSDPLPAAVG-LRVLDVVQR-DGLVARANVMGDRLRR 339 (433)
T ss_dssp CHHHHT-TSSCEEEEEC--------HHHHHHHHHTTCCCCCTTTTCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHH
T ss_pred cccccC-CCCeeEEEEh--------HHHHHhhccCCCCCCCCCCcCHHHHHHH-HHHHHHHHh-CCHHHHHHHHHHHHHH
Confidence 999986 9999999985 36777776532 13456788888877 455432111 1156667777777777
Q ss_pred hhcC----CCCceeeCCCCceEeeec
Q 019298 321 SYKL----IPELINFKSTGSSLKYLD 342 (343)
Q Consensus 321 ~L~~----~~g~~~~~~~~g~~~~~~ 342 (343)
.|++ +|.+....+ .|+|+|++
T Consensus 340 ~l~~l~~~~~~~~~~~~-~g~~~~i~ 364 (433)
T 1zod_A 340 GLLDLMERFDCIGDVRG-RGLLLGVE 364 (433)
T ss_dssp HHHHHHHHCTTEEEEEE-ETTEEEEE
T ss_pred HHHHHHHhCCCeEEEEE-EEEEEEEE
Confidence 6654 344433333 46677765
No 140
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.94 E-value=2.3e-25 Score=206.50 Aligned_cols=258 Identities=12% Similarity=0.093 Sum_probs=184.2
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEE-EecChHHHHHHHHHHhcCCCCeE
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPNDVF-VTSGCTQAIDVAMALLSRPGANI 127 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~i~-~~~g~~~al~~~~~~l~~~gd~v 127 (343)
.+.++.+.+++.+ .....|.+. ....++++.+++++ +.++++++ +++|+++++..+++++.++||+|
T Consensus 20 ~~~~~~v~~a~~~----~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~V 89 (416)
T 3isl_A 20 VEVDPRVLRVMST----PVVGQFDPAFTGIMNETMEMLRELF------QTKNRWAYPIDGTSRAGIEAVLASVIEPEDDV 89 (416)
T ss_dssp CCCCHHHHHHTTS----CCCCTTSHHHHHHHHHHHHHHHHHT------TCCCSEEEEEESCHHHHHHHHHHHHCCTTCEE
T ss_pred cCcCHHHHHHhcc----cCCCCccHHHHHHHHHHHHHHHHHh------CCCCCcEEEecCcHHHHHHHHHHHhcCCCCEE
Confidence 4456777665544 223334321 12345566666665 34566665 88899999999999999999999
Q ss_pred EEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 128 LLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 128 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
++++|+|.+ +...++..|.+++.++++. ++.+|+++++++++ ++++++++++|+||||.+++ +++|.++|++
T Consensus 90 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 164 (416)
T 3isl_A 90 LIPIYGRFGYLLTEIAERYGANVHMLECEW--GTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACRT 164 (416)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHHH
T ss_pred EEecCCcccHHHHHHHHhcCCeeEEEecCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHHH
Confidence 999999987 6677888999999998764 34689999999998 58899999999999999987 7788899999
Q ss_pred cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc-cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh----
Q 019298 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR-WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF---- 279 (343)
Q Consensus 205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~---- 279 (343)
||+++|+|++|+.... ... ....+..+++.|++|. ++.. ++|+++++ +++++++....
T Consensus 165 ~~~~li~D~a~~~~~~----~~~---~~~~~~d~~~~s~~K~l~g~~--g~g~~~~~--------~~~~~~~~~~~~~~~ 227 (416)
T 3isl_A 165 EDALFIVDAVATIGGC----EVK---VDEWKIDAAIGGTQKCLSVPS--GMAPITYN--------ERVADVIAARKKVER 227 (416)
T ss_dssp TTCEEEEECTTTTTTS----CCC---TTTTTCSEEECCSSSTTCCCS--SEEEEEEC--------HHHHHHHHTC-----
T ss_pred cCCEEEEECCccccCC----Ccc---hhhcCCCEEEecCccccCCCC--CeEEEEEC--------HHHHHHhhccccccc
Confidence 9999999999875321 111 1222345999999997 4444 58999885 36777665321
Q ss_pred ----------------------------------c-cccCcchHHHHHHHhccchhhHHH-H-HHHHHHHHHHHHHHHhh
Q 019298 280 ----------------------------------D-ILGDPATFIQVCIMYGCLSTIMQI-M-IHGNFLENFAGSCVPSY 322 (343)
Q Consensus 280 ----------------------------------~-~~~~~~~~~~~a~~~~~l~~~~~~-l-~~~~~~~~~~~~~~~~L 322 (343)
. ..+.++...+.++ .+++....++ + +.+++++++++.+.+.|
T Consensus 228 Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~l~~~L 306 (416)
T 3isl_A 228 GIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYAL-REGVRLVLEEGLETRFERHRHHEAALAAGI 306 (416)
T ss_dssp -------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 1 1234455555555 5555543343 3 38888999999999999
Q ss_pred cCCCCceeeCCCC---ceEeeec
Q 019298 323 KLIPELINFKSTG---SSLKYLD 342 (343)
Q Consensus 323 ~~~~g~~~~~~~~---g~~~~~~ 342 (343)
+++ |+.+..+.+ +.++|+.
T Consensus 307 ~~~-g~~~~~~~~~~~~~~~~~~ 328 (416)
T 3isl_A 307 KAM-GLRLFGDDSCKMPVVTCVE 328 (416)
T ss_dssp HHT-TCCBCSCGGGBCTTEEEEE
T ss_pred HHc-CCEeccCccccCCcEEEEe
Confidence 986 888766654 5566654
No 141
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.94 E-value=5.8e-25 Score=209.62 Aligned_cols=253 Identities=14% Similarity=0.102 Sum_probs=184.3
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcE--EEecChHHHHHHHHHHhcCCC--------CeEEEeCCCCcchHHHH
Q 019298 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALLSRPG--------ANILLPRPGFPIYELSA 141 (343)
Q Consensus 72 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l~~~g--------d~vl~~~p~~~~~~~~~ 141 (343)
.|....+..++++.+++++.+.+|...+++++ ++|+|+++++..+++++.++| |+|+++.|+|..+...+
T Consensus 130 ~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~ 209 (514)
T 3mad_A 130 HPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAA 209 (514)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHH
T ss_pred ccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHH
Confidence 44444566788889988888888766656788 999999999999999998766 89999999999999999
Q ss_pred HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC
Q 019298 142 AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221 (343)
Q Consensus 142 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~ 221 (343)
+..|.+++.++++. ++.+|+++|++++++++++|++++|+||||.+.+ +++|.++|++||+++|+|++|+++.+.
T Consensus 210 ~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~ 284 (514)
T 3mad_A 210 QYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILP 284 (514)
T ss_dssp HHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHH
T ss_pred HHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccch
Confidence 99999999998864 5779999999999989999999999999999965 688888999999999999999987541
Q ss_pred -----CCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc------------cccC
Q 019298 222 -----DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD------------ILGD 284 (343)
Q Consensus 222 -----~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~------------~~~~ 284 (343)
+.....+. ....+..+++.|++|. +..|.++|++++++ +.......... ..++
T Consensus 285 ~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~gs 354 (514)
T 3mad_A 285 WAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRR--------PDLLHYQYFIAADWPGGLYFSPTFAGS 354 (514)
T ss_dssp HHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESS--------HHHHTTTCEEESSCTTCSEEESSSCSS
T ss_pred hHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeC--------HHHhccccccccccCCCcccCCccCCC
Confidence 11111111 1222345889999999 46678899999864 22222111100 0112
Q ss_pred cchHHHHHHHhccchh-hHHH-HHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298 285 PATFIQVCIMYGCLST-IMQI-MIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL 341 (343)
Q Consensus 285 ~~~~~~~a~~~~~l~~-~~~~-l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~ 341 (343)
.+.....+. .+++.. .... .+..+++.++++++.+.|++++|+.+..+..+ ++|+
T Consensus 355 ~~~~~~~a~-~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~ 411 (514)
T 3mad_A 355 RPGALSATA-WAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAV 411 (514)
T ss_dssp CCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEE
T ss_pred CchHHHHHH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEE
Confidence 222222222 222221 1222 33888889999999999999889987666555 5554
No 142
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.94 E-value=3.5e-25 Score=204.16 Aligned_cols=278 Identities=15% Similarity=0.087 Sum_probs=183.6
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++.++||+.+.+. +.++ .+|.+.+++.+++.... +.| ..+..++++++++++.+..+ ++++++++|++++
T Consensus 35 g~~~lD~~~~~~~--~~lG~~~p~v~~a~~~~~~~~~-~~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea 105 (395)
T 3nx3_A 35 AKKYLDFSSGIGV--CALGYNHAKFNAKIKAQVDKLL-HTS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTES 105 (395)
T ss_dssp CCEEEESSHHHHT--CTTCBSCHHHHHHHHHHHTTCS-CCC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHH
T ss_pred CCEEEECCCcHHh--ccCCCCCHHHHHHHHHHHHhcc-ccc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence 6789999988643 2244 68999999999887532 122 12334555555555555433 6899999999999
Q ss_pred HHHHHHHhc-------CCCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCCCCCCHHHHHhhhcC
Q 019298 113 IDVAMALLS-------RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDIESLADQ 172 (343)
Q Consensus 113 l~~~~~~l~-------~~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~~~~ 172 (343)
+..+++.+. .++++|++.+|+|+++...+...+. ++..++. .|+++|++++++
T Consensus 106 ~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~ 178 (395)
T 3nx3_A 106 IEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNE 178 (395)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCT
T ss_pred HHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccC
Confidence 999998875 3579999999999877654444332 2333322 279999999987
Q ss_pred CceEEEEeCCCCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC
Q 019298 173 NTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (343)
Q Consensus 173 ~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G 251 (343)
++++++++.++|++|.. ++.+++++|.++|++||+++|+||+|.++...+.. .....++.. ..+.|+||.++. |
T Consensus 179 ~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~---~d~~t~sK~~~~-G 253 (395)
T 3nx3_A 179 KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKF-FAYEHAQIL---PDIMTSAKALGC-G 253 (395)
T ss_dssp TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCC---CSEEEECGGGTT-T
T ss_pred CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcc-hhHHhcCCC---CCEEEecccccC-C
Confidence 78888877777777776 78889999999999999999999999987654432 111222221 223478999975 9
Q ss_pred CcEEEEEEeCCCCCCCchHH-HHHHhhhh-ccccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHHHHHHhhcCCC
Q 019298 252 WRLGWFVTTDPCGMFRKPKV-VERMKKYF-DILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAGSCVPSYKLIP 326 (343)
Q Consensus 252 ~r~G~i~~~~~~~~~~~~~~-~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~~~~~~L~~~~ 326 (343)
+|+||++++ +++ ++.++... ...++.++++++++ .++|+.. .++.+ .++..+..++.+.+.+..+|
T Consensus 254 ~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~aa-~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 324 (395)
T 3nx3_A 254 LSVGAFVIN--------QKVASNSLEAGDHGSTYGGNPLVCAGV-NAVFEIFKEEKILENVNKLTPYLEQSLDELINEFD 324 (395)
T ss_dssp SCCEEEEEC--------HHHHHHHSCTTCCSSCBSCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CceEEEEEc--------hhhhhhhcCCcccCCCCCCCHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999985 356 77776553 23567788888887 5555421 22222 22233333444444444455
Q ss_pred CceeeCCCCceEeeec
Q 019298 327 ELINFKSTGSSLKYLD 342 (343)
Q Consensus 327 g~~~~~~~~g~~~~~~ 342 (343)
.+.... ..|+|+|++
T Consensus 325 ~~~~~~-~~g~~~~~~ 339 (395)
T 3nx3_A 325 FCKKRK-GLGFMQGLS 339 (395)
T ss_dssp TEEEEE-EETTEEEEE
T ss_pred CeEEEE-eEEEEEEEE
Confidence 444323 346666664
No 143
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.3e-25 Score=208.08 Aligned_cols=273 Identities=15% Similarity=0.102 Sum_probs=196.4
Q ss_pred CCcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC-----C
Q 019298 52 HTTHVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----P 123 (343)
Q Consensus 52 ~~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~ 123 (343)
..++.+.+++.+++... ....|....+..++++.+++++.+.+|...+++++++++|+++++..+++++.+ +
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 44577888888777642 223455555677899999999988888766688999999999999999998864 4
Q ss_pred C---CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHH
Q 019298 124 G---ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200 (343)
Q Consensus 124 g---d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 200 (343)
| |+|+++.|+|..+...+...|.+++.+++++ +++.+|+++|++++++++++|++++|+||||.+.+ +++|.+
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~ 230 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK 230 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence 5 8999999999999999999999999998864 36789999999999988999999999999999954 778888
Q ss_pred HHhhcCcEEEEccCCCccccC-----CCCCC-cccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 201 TANKLKTLVIADEVYGHLVFG-----DKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 201 ~~~~~~~~~i~D~ay~~~~~~-----~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
+|+++|+++|+|++|+.+... +.... ++ .....+..+++.|++|. +..+.++||+++++ +....
T Consensus 231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~-~~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~ 300 (497)
T 3mc6_A 231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLL-DFRVPGVTSISCDTHKY-GFAPKGSSVIMYRN--------SDLRM 300 (497)
T ss_dssp HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCC-STTSTTCCEEEEETTTT-TCCCSSCEEEECSS--------HHHHT
T ss_pred HHHHhCCEEEEECcchhhhhhhhhhhcccCCccc-cccCCCCcEEEECchhh-cCCCCCceeEEecC--------HHHHh
Confidence 999999999999999965321 11101 11 11122335888999998 56778899999864 22222
Q ss_pred Hhhhhccc------------cCcc---hHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC-CCCceee-CCCCce
Q 019298 275 MKKYFDIL------------GDPA---TFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL-IPELINF-KSTGSS 337 (343)
Q Consensus 275 l~~~~~~~------------~~~~---~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~-~~g~~~~-~~~~g~ 337 (343)
........ ++.+ ..++.++ ...+.. ..+.+..++..++++.+.+.|++ +||+.+. .+.+++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aa-l~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~ 378 (497)
T 3mc6_A 301 HQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWAT-MVNMGE-NGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSV 378 (497)
T ss_dssp TTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSE
T ss_pred hhhcccccccCCCcCCcCcccCCcchhHHHHHHH-HHHHhH-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeE
Confidence 21111000 0111 2223333 222221 22334788888899999999998 7999865 455555
Q ss_pred Eee
Q 019298 338 LKY 340 (343)
Q Consensus 338 ~~~ 340 (343)
+.|
T Consensus 379 v~~ 381 (497)
T 3mc6_A 379 ISF 381 (497)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 144
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.93 E-value=4.3e-25 Score=202.45 Aligned_cols=273 Identities=12% Similarity=0.091 Sum_probs=189.1
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.+.|+-|- .++++++.+++.+.... .|.+. ....++++.+++++... .++++++|++|+|+++++
T Consensus 5 ~~~~~~p~p------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~v~~~~g~t~al 72 (385)
T 2bkw_A 5 VDTLLIPGP------IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSA--AASKSQPFVLAGSGTLGW 72 (385)
T ss_dssp CCEECSSSS------CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCC--GGGTCEEEEEESCTTHHH
T ss_pred cceeecCCC------cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCC--CCCCCceEEEcCchHHHH
Confidence 345555553 45678888777654321 23221 13456778888888542 234678999999999999
Q ss_pred HHHHHHhc---CCCCeEEEe-CCCCcch-HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcc
Q 019298 114 DVAMALLS---RPGANILLP-RPGFPIY-ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCG 187 (343)
Q Consensus 114 ~~~~~~l~---~~gd~vl~~-~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG 187 (343)
..+++++. ++||+|+++ .|+|..+ ...++..|.+++.+++. +.++.+|+++|++++++ +++++++++|+||||
T Consensus 73 ~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG 151 (385)
T 2bkw_A 73 DIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTSTA 151 (385)
T ss_dssp HHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTTT
T ss_pred HHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcC
Confidence 99999997 899999888 5566555 35677789999998872 24567999999999876 789999999999999
Q ss_pred cccCHHHHHHHHHHHhhc--CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC-CCCCcEEEEEEeCCCC
Q 019298 188 NVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCG 264 (343)
Q Consensus 188 ~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~i~~~~~~~ 264 (343)
.+++ +++|+++|+++ |+++|+|++|+... ....+ ...+..+++.|+||.++ .+| +||+++++
T Consensus 152 ~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~---~~~~~d~~~~s~~K~~~~~~G--~G~~~~~~--- 216 (385)
T 2bkw_A 152 VLSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEF---DEWGVDFALTASQKAIGAPAG--LSISLCSS--- 216 (385)
T ss_dssp EECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCT---TTTTCSEEEEESSSTTCCCSC--EEEEEECH---
T ss_pred eEcC---HHHHHHHHHhhCCCCEEEEECccccCC----ccccc---cccCceEEEecCccccccCCc--ceEEEEcH---
Confidence 9987 56888899999 99999999997522 11112 22234589999999754 466 59999853
Q ss_pred CCCchHHHH-HHh----------------------hhhc---c-ccCcchHHHHHHHhccchhhHHH-H-HHHHHHHHHH
Q 019298 265 MFRKPKVVE-RMK----------------------KYFD---I-LGDPATFIQVCIMYGCLSTIMQI-M-IHGNFLENFA 315 (343)
Q Consensus 265 ~~~~~~~~~-~l~----------------------~~~~---~-~~~~~~~~~~a~~~~~l~~~~~~-l-~~~~~~~~~~ 315 (343)
++++ +++ .... . .+.++...+.++ .+++....+. + +.++++++++
T Consensus 217 -----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~ 290 (385)
T 2bkw_A 217 -----RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSL-DVALKEILEEGLHKRWDLHREMS 290 (385)
T ss_dssp -----HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHH
T ss_pred -----HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHH-HHHHHHHHHccHHHHHHHHHHHH
Confidence 4444 331 1111 0 134556655555 4444432222 3 3788889999
Q ss_pred HHHHHhh-cCCCCceeeCCC-----CceEeeecC
Q 019298 316 GSCVPSY-KLIPELINFKST-----GSSLKYLDL 343 (343)
Q Consensus 316 ~~~~~~L-~~~~g~~~~~~~-----~g~~~~~~l 343 (343)
+.+.+.| +++ |+.+..++ .++++|+++
T Consensus 291 ~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~ 323 (385)
T 2bkw_A 291 DWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYV 323 (385)
T ss_dssp HHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEEC
T ss_pred HHHHHHHHHhc-CceecccCcccccCCceEEEec
Confidence 9999999 888 88865432 577777753
No 145
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.93 E-value=1.2e-24 Score=200.26 Aligned_cols=262 Identities=13% Similarity=0.078 Sum_probs=188.5
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~ 115 (343)
+.|+|+. |. + ++.+.+++.+++... .|.+..+..++|++++++++ .+++++++|+++++..
T Consensus 9 ~~i~~~~--p~----~--~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~ 69 (393)
T 1mdo_A 9 DFLPFSR--PA----M--GAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHI 69 (393)
T ss_dssp CCBCSCC--CC----C--CHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHH
T ss_pred cccccCC--CC----C--CHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHH
Confidence 3567765 32 2 367788888888653 24445678999999999993 3589999999999999
Q ss_pred HHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298 116 AMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (343)
Q Consensus 116 ~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 194 (343)
+++++ +++||+|+++.|+|..+...++..|.+++.+++++ +++.+|++++++.+++++++++++ ||||... +
T Consensus 70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~---~ 142 (393)
T 1mdo_A 70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPA---D 142 (393)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCC---C
T ss_pred HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcC---C
Confidence 99999 89999999999999999999999999999998864 356799999999998778877765 4899985 4
Q ss_pred HHHHHHHHhhcCcEEEEccCCCcc-ccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
+++|.++|+++|+++|+|++|+.+ .+.+.. + .. .++++.|+||+.+++|.|+||+++++ +++++
T Consensus 143 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~-------~~~~~ 207 (393)
T 1mdo_A 143 LDAIYALGERYGIPVIEDAAHATGTSYKGRH---I---GA--RGTAIFSFHAIKNITCAEGGIVVTDN-------PQFAD 207 (393)
T ss_dssp HHHHHHHHHHHTCCBCEECTTCTTCEETTEE---T---TS--SSEEEEECCTTSSSCSSSCEEEEESC-------HHHHH
T ss_pred HHHHHHHHHHcCCeEEEECccccCCeECCee---c---CC--CCeEEEeCCCCCccccccceEEEeCC-------HHHHH
Confidence 788888999999999999999963 333221 1 11 45999999955555666899999853 46777
Q ss_pred HHhhhhccc-------------------------cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 019298 274 RMKKYFDIL-------------------------GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPEL 328 (343)
Q Consensus 274 ~l~~~~~~~-------------------------~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~ 328 (343)
+++...... ...+++..++. ...+ ..+-+..++.+++++.+.+.|.+++ +
T Consensus 208 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~-~~~l---~~~~~~~~~~~~~~~~l~~~L~~~~-~ 282 (393)
T 1mdo_A 208 KLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIA-LAQL---QKLDALNARRAAIAAQYHQAMADLP-F 282 (393)
T ss_dssp HHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHH-HHHH---HTHHHHHHHHHHHHHHHHHHHHTSS-C
T ss_pred HHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHhcCC-c
Confidence 776543211 11233333332 2222 1222355556677888888888884 6
Q ss_pred eee-CC-----CCceEeeecC
Q 019298 329 INF-KS-----TGSSLKYLDL 343 (343)
Q Consensus 329 ~~~-~~-----~~g~~~~~~l 343 (343)
.+. .+ .+++++|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~ 303 (393)
T 1mdo_A 283 QPLSLPSWEHIHAWHLFIIRV 303 (393)
T ss_dssp EECCCCSSCEECCCSCEEEEC
T ss_pred ccccCCCCCCCceeEEEEEEe
Confidence 643 22 4566777753
No 146
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.93 E-value=1.9e-25 Score=209.64 Aligned_cols=288 Identities=12% Similarity=0.024 Sum_probs=187.9
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++.++||+.+... +.++ .+|.+.+++.+++... ..|....+..+.+.++++++.+..+. ...++|++++|++++
T Consensus 63 G~~ylD~~~~~~~--~~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGseA 137 (453)
T 4ffc_A 63 GNSFIDLGAGIAV--TTVGASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPG-DHDKRTALFNSGAEA 137 (453)
T ss_dssp SCEEEESSHHHHT--CTTCTTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSC-SSCEEEEEESSHHHH
T ss_pred CCEEEEcCCCccc--CcCCCCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCC-CCCcEEEEeCcHHHH
Confidence 6788999988543 2244 5899999999998754 23544445567777777777665442 135799999999999
Q ss_pred HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCc--------------eeEEeecCC--CCCCCCC--------HHHH
Q 019298 113 IDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLP--DKGWEVD--------LDDI 166 (343)
Q Consensus 113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~--~~~~~~d--------~~~l 166 (343)
+..+++.+.. .+++|++.+++|+++...+...+. .+..++... .+.++.+ ++.|
T Consensus 138 ~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 217 (453)
T 4ffc_A 138 VENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRI 217 (453)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHH
Confidence 9999987653 458999999999887665544422 334444321 1212233 4566
Q ss_pred HhhhcCCceEEEEeCCCCCcc--cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCc
Q 019298 167 ESLADQNTVALVIINPGNPCG--NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244 (343)
Q Consensus 167 ~~~~~~~~~~i~~~~p~nptG--~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 244 (343)
++.+..+..+++++.|.|++| ...+.+.+++|.++|++||+++|+||+|.++.+.+.. .....++.. ..+.|||
T Consensus 218 ~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~a~~~~~~~---pdi~t~s 293 (453)
T 4ffc_A 218 ETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAW-FASEHEGIV---PDIVTMA 293 (453)
T ss_dssp HHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCC---CSEEEEC
T ss_pred HHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccccc-chhhhcCCC---cchHhhh
Confidence 666655667888889977766 4457788999999999999999999999987655432 122222222 2244789
Q ss_pred cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhh-
Q 019298 245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSY- 322 (343)
Q Consensus 245 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L- 322 (343)
|+++. |+|+||++++ +++++.+.... ..+++.++++++++ .++|+.... -+..++++++++.+.+.|
T Consensus 294 K~~~~-G~~~G~~~~~--------~~i~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~-~~~~~~~~~~~~~l~~~l~ 362 (453)
T 4ffc_A 294 KGIAG-GMPLSAVTGR--------AELMDAVYAGGLGGTYGGNPVTCAAA-VAALGVMRE-LDLPARARAIEASVTSRLS 362 (453)
T ss_dssp GGGGT-TSSCEEEEEE--------HHHHTTSCTTSSCCSSSSCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHHH
T ss_pred hhhcC-CcCeEEEEEC--------HHHHhhhcccCcCCCCCcCHHHHHHH-HHHHHHhhh-hhHHHHHHHHHHHHHHHHH
Confidence 99977 9999999985 36777766543 33667889988888 555542110 013444444444444444
Q ss_pred ---cCCCCceeeCCCCceEeeec
Q 019298 323 ---KLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 323 ---~~~~g~~~~~~~~g~~~~~~ 342 (343)
..+|.+.... ..|+|+|++
T Consensus 363 ~~~~~~~~~~~~~-~~g~~~~~~ 384 (453)
T 4ffc_A 363 ALAEEVDIIGEVR-GRGAMLAIE 384 (453)
T ss_dssp HHHHHCSSEEEEE-EETTEEEEE
T ss_pred HHHhhCCCeEEEE-eeceEEEEE
Confidence 4455544323 335666654
No 147
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.93 E-value=1e-25 Score=210.31 Aligned_cols=266 Identities=15% Similarity=0.067 Sum_probs=174.3
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||+.+... +.++ .+|.+.+++++++.......|+. ....+|++.+++++ + .+++|++++|+++
T Consensus 53 ~g~~ylD~~~~~~~--~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~-~~~~v~~~~sGse 122 (434)
T 3l44_A 53 DGNKYIDYLAAYGP--IITGHAHPHITKAITTAAENGVLYGTPT-ALEVKFAKMLKEAM------P-ALDKVRFVNSGTE 122 (434)
T ss_dssp TCCEEEECCGGGTT--CSSCBTCHHHHHHHHHHHHHCSCCSSCC-HHHHHHHHHHHHHC------T-TCSEEEEESSHHH
T ss_pred CCCEEEECCCchhc--cccCCCCHHHHHHHHHHHHhCcCCCCCC-HHHHHHHHHHHHhC------C-CCCEEEEeCchHH
Confidence 37789999988744 2244 68999999999987654334543 34566777777765 2 5789999999999
Q ss_pred HHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCc-eeEEeecCCCCCC--------C----CCHHHHHhhhcC--Cc
Q 019298 112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI-EVRHFDLLPDKGW--------E----VDLDDIESLADQ--NT 174 (343)
Q Consensus 112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~--------~----~d~~~l~~~~~~--~~ 174 (343)
++..+++.+.. ++++|++.+|+|+.+...+...+. ...........+. . -|+++|+++++. ..
T Consensus 123 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 202 (434)
T 3l44_A 123 AVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHE 202 (434)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCC
Confidence 99999988764 678999999999876554433322 1111111000000 0 178999988863 33
Q ss_pred eEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298 175 VALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (343)
Q Consensus 175 ~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 252 (343)
.++++++| +|++|.+. +.+.+++|.++|++||+++|+||+|.+| ..+.. .....++...+ +.||||.|+ +|+
T Consensus 203 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~~-~G~ 276 (434)
T 3l44_A 203 VAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYG-GAQDLLGVTPD---LTALGKVIG-GGL 276 (434)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSS-CHHHHHTCCCS---EEEEEGGGG-TTS
T ss_pred EEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecccc-HHHHHcCCCCC---eeehhhhhc-CCc
Confidence 45566666 55666665 8889999999999999999999999988 44332 11111222222 447899997 799
Q ss_pred cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298 253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~ 324 (343)
|+||++++ +++++.+... ...+++.++++++++ .++|+...+ -+..++++++++.+.+.|++
T Consensus 277 ~iG~~~~~--------~~i~~~~~~~~~~~~~~t~~~~~~a~aaa-~aal~~~~~-~~~~~~~~~~~~~l~~~L~~ 342 (434)
T 3l44_A 277 PIGAYGGK--------KEIMEQVAPLGPAYQAGTMAGNPASMASG-IACLEVLQQ-EGLYEKLDELGATLEKGILE 342 (434)
T ss_dssp SCEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHH-HHHHHHHTS-TTHHHHHHHHHHHHHHHHHH
T ss_pred CeeeEEEc--------HHHHHhhccCCCcccCCCCCcCHHHHHHH-HHHHHHHHc-ccHHHHHHHHHHHHHHHHHH
Confidence 99999884 4677776652 223567788888887 555542111 11455555555555555543
No 148
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.93 E-value=3.2e-25 Score=203.77 Aligned_cols=258 Identities=14% Similarity=0.084 Sum_probs=183.3
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeE
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANI 127 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~v 127 (343)
.++++.+.+++.+... ..|.+ .....++++.+++++. .+. ++|++|+|+++++..+++++.++||+|
T Consensus 32 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~gg~~al~~~~~~~~~~gd~v 101 (393)
T 3kgw_A 32 SNLAPRVLAAGSLRMI----GHMQKEMLQIMEEIKQGIQYVFQ------TRNPLTLVVSGSGHCAMETALFNLLEPGDSF 101 (393)
T ss_dssp CCCCHHHHHHTTCCCC----CTTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESCCTTTHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhccccc----CcccHHHHHHHHHHHHHHHHHhC------CCCCcEEEEeCCcHHHHHHHHHhcCCCCCEE
Confidence 5678888887765322 12222 1233466677777662 233 369999999999999999999999999
Q ss_pred EEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 128 LLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 128 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
+++.++|.+ +...+...|.+++.++++. ++.+|+++|++.+++ +++++++++|+||||.+++ +++|.++|++
T Consensus 102 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 176 (393)
T 3kgw_A 102 LTGTNGIWGMRAAEIADRIGARVHQMIKKP--GEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHR 176 (393)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EEEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHH
Confidence 999988853 3567788899999998754 346899999999987 8999999999999999987 6788889999
Q ss_pred cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC-CCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc---
Q 019298 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD--- 280 (343)
Q Consensus 205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~--- 280 (343)
||+++|+|++|+... . ... ....+..+++.|+||+++ ..| +||++++ +++++.+.....
T Consensus 177 ~~~~li~De~~~~g~---~-~~~---~~~~~~d~~~~s~sK~~~~~~g--~g~~~~~--------~~~~~~~~~~~~~~~ 239 (393)
T 3kgw_A 177 YQCLLLVDSVASLGG---V-PIY---MDQQGIDIMYSSSQKVLNAPPG--ISLISFN--------DKAKYKVYSRKTKPV 239 (393)
T ss_dssp TTCEEEEECTTTTTT---S-CCC---TTTTTCCEEEEESSSTTCCCSS--CEEEEEC--------HHHHHHHHTCSSCCS
T ss_pred cCCEEEEECCccccC---c-ccc---hhhcCCCEEEecCcccccCCCc--eeEEEEC--------HHHHHHHhccCCCCC
Confidence 999999999987421 1 111 122234588999999763 444 8999885 467777764321
Q ss_pred ---------------------cccCcchHHHHHHHhccchhhHH--HHHHHHHHHHHHHHHHHhhcCCCCceeeCCCC--
Q 019298 281 ---------------------ILGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLENFAGSCVPSYKLIPELINFKSTG-- 335 (343)
Q Consensus 281 ---------------------~~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~-- 335 (343)
..+.++...+.++ .+++....+ +-+.+++++++++.+.+.|+++ |+.+..+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 317 (393)
T 3kgw_A 240 SFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCL-RESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFFVKDPEI 317 (393)
T ss_dssp CSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGG
T ss_pred ceeecHHHHHHhhhhccccCCCCCCCCHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhh
Confidence 0234455555555 444443222 2338888999999999999988 787654432
Q ss_pred --ceEeeec
Q 019298 336 --SSLKYLD 342 (343)
Q Consensus 336 --g~~~~~~ 342 (343)
++++|+.
T Consensus 318 ~~~~~~~~~ 326 (393)
T 3kgw_A 318 RLPTITTVT 326 (393)
T ss_dssp BCSSEEEEE
T ss_pred cCCeEEEEe
Confidence 4555553
No 149
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.93 E-value=1e-24 Score=199.41 Aligned_cols=252 Identities=17% Similarity=0.121 Sum_probs=185.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+.+.++|+.+.|. ..+ +.+++.+.+... .|.+..+..++|+.++++++ .+++++++|+++++
T Consensus 5 ~~~~~~l~~~~~~------~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~ 66 (374)
T 3uwc_A 5 RVPYSYLERQFAD------IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDAL 66 (374)
T ss_dssp CBCSCCHHHHTSS------CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHH
T ss_pred cceeeccccCCCC------chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHH
Confidence 3567888888753 234 888888877653 56677788999999999983 34889999999999
Q ss_pred HHHHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 114 DVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 114 ~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
..+++++ .++||+|+++.|+|..+...++..|.+++.++++ +++.+|++++++.+++++++++ |+||||...+
T Consensus 67 ~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~- 140 (374)
T 3uwc_A 67 AMSFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD- 140 (374)
T ss_dssp HHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC-
T ss_pred HHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC-
Confidence 9999999 8999999999999999999999999999999886 5677999999999987777666 9999999854
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCcccc-CCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCch
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKP 269 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~-~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~ 269 (343)
+++|.++|+++|+++|+|++|..+.. .+... ..+. .+++.|+| |.++.+|. .|++++++ +
T Consensus 141 --~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~---~~~~----d~~~~s~~~~K~l~~~g~-~g~~~~~~-------~ 203 (374)
T 3uwc_A 141 --MPALAKIAKKHNLHIVEDACQTILGRINDKFV---GSWG----QFACFSLHPLKNLNVWSD-AGVIITHS-------D 203 (374)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTCTTCEETTEET---TSSS----SEEEEECSSSSSSCCSSC-CEEEEESC-------H
T ss_pred --HHHHHHHHHHcCCEEEEeCCCccCceeCCeec---cccc----cEEEEeCCCCCcCCccce-eEEEEeCC-------H
Confidence 77888889999999999999997432 22211 1111 37888866 99877565 78888754 4
Q ss_pred HHHHHHhhhhcc-------------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCC-cee
Q 019298 270 KVVERMKKYFDI-------------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPE-LIN 330 (343)
Q Consensus 270 ~~~~~l~~~~~~-------------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g-~~~ 330 (343)
++.++++..... ....+.....+. ...+ ..+-+..++.+++.+.+.+.|.++++ +.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~-~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 274 (374)
T 3uwc_A 204 EYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIA-NRLM---NQLETITEKRRGIAHLYDQSFVDLSEFIDV 274 (374)
T ss_dssp HHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHH-HHHG---GGHHHHHHHHHHHHHHHHHHTGGGTTTEEC
T ss_pred HHHHHHHHHHhcCccccCccccccccCCCCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhccCCCeEEe
Confidence 566666654321 111233333222 2221 22333666777788888888888866 664
No 150
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.93 E-value=1.8e-24 Score=202.97 Aligned_cols=283 Identities=13% Similarity=0.054 Sum_probs=182.1
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++.++||+.|.+.. .++ .+|.+.+++.+++..... ....+..+.+.++++++.+.++ ...+ |++|+|++++
T Consensus 48 g~~~lD~~~~~~~~--~lG~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggseA 119 (452)
T 3n5m_A 48 GKRYLDGMSGLWCV--NSGYGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSEA 119 (452)
T ss_dssp CCEEEETTHHHHTC--TTCBCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHHH
T ss_pred CCEEEECCcchhhc--cCCCCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHHH
Confidence 77899999885332 233 579999999999875321 2223444566666666655443 3344 9999999999
Q ss_pred HHHHHHHhc-----C---CCCeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCCCCCC-C--------
Q 019298 113 IDVAMALLS-----R---PGANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEV-D-------- 162 (343)
Q Consensus 113 l~~~~~~l~-----~---~gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~-d-------- 162 (343)
+..+++.+. . ++++|++.+|+|+++...+...+.. +..++......... |
T Consensus 120 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (452)
T 3n5m_A 120 NETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVE 199 (452)
T ss_dssp HHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHH
Confidence 999999887 5 7799999999998876655554322 22222110000001 1
Q ss_pred -HHHHHhhhc----CCceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298 163 -LDDIESLAD----QNTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (343)
Q Consensus 163 -~~~l~~~~~----~~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~ 235 (343)
+++|++.++ +++++++++.+ +| ||.++ +.+.+++|.++|++||+++|+||+|.++.+.+.. .....++...
T Consensus 200 ~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~~~~~~~~~~ 277 (452)
T 3n5m_A 200 CVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKA-FGFMNYDVKP 277 (452)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTCCC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCccccc-chhhhcCCCC
Confidence 789998886 34555666666 79 99766 8888999999999999999999999988665542 1222222222
Q ss_pred CEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh---h----hccccCcchHHHHHHHhccchhhHHHHHH
Q 019298 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK---Y----FDILGDPATFIQVCIMYGCLSTIMQIMIH 307 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~---~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~ 307 (343)
+ +.+|||+++. | +|+||++++ +++++.+.. . ...+++.++++++++ .++|+.... -+.
T Consensus 278 d---i~t~sK~l~~-G~~~ig~~~~~--------~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~-~~~ 343 (452)
T 3n5m_A 278 D---IITMAKGITS-AYLPLSATAVK--------REIYEAFKGKGEYEFFRHINTFGGNPAACALA-LKNLEIIEN-ENL 343 (452)
T ss_dssp S---EEEECGGGGT-TSSCCEEEEEE--------HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHH-HHHHHHHHH-TTH
T ss_pred C---EEeecccccC-CCcceEEEEEC--------HHHHHHHhhccCCCCccccCCCCCCHHHHHHH-HHHHHHHHh-ccH
Confidence 2 3368999876 9 999999985 367777743 1 223567788888888 555542111 113
Q ss_pred HHHHHHHHHHHHHhh----cCCCCceeeCCCCceEeee
Q 019298 308 GNFLENFAGSCVPSY----KLIPELINFKSTGSSLKYL 341 (343)
Q Consensus 308 ~~~~~~~~~~~~~~L----~~~~g~~~~~~~~g~~~~~ 341 (343)
.++++++.+.+.+.| ..+|.+....+.| .|+++
T Consensus 344 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~i 380 (452)
T 3n5m_A 344 IERSAQMGSLLLEQLKEEIGEHPLVGDIRGKG-LLVGI 380 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEEESS-SCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEE-EEEEE
Confidence 444444444444444 4555555434444 44444
No 151
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.93 E-value=1e-24 Score=198.16 Aligned_cols=271 Identities=11% Similarity=0.003 Sum_probs=185.7
Q ss_pred eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHH
Q 019298 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116 (343)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~ 116 (343)
.++|+-|- .++++.+.+++.+++.+.....+....+..++.+.+.+.+.+.+|.. ++++|++|+|+++++..+
T Consensus 5 ~~~~~p~p------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~~ 77 (362)
T 3ffr_A 5 KIYFTPGP------SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWERI 77 (362)
T ss_dssp CEEECSSS------CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHHH
T ss_pred ceeccCCC------cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHHH
Confidence 45555443 45678888888887765431111112223345555556655555543 567899999999999999
Q ss_pred HHHhcCCCCeEEEeCCCCcc-hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHH
Q 019298 117 MALLSRPGANILLPRPGFPI-YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195 (343)
Q Consensus 117 ~~~l~~~gd~vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l 195 (343)
++++.++ +.+++..+.|.. +...++..|.+++.++.+ .++.+|+++++ ++++++++++++|+||||.+++ +
T Consensus 78 ~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~---l 149 (362)
T 3ffr_A 78 IQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP---V 149 (362)
T ss_dssp HHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---H
T ss_pred HHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---H
Confidence 9999988 556666666652 334667789999998874 45678999998 6778999999999999999987 6
Q ss_pred HHHHHHHhhc-CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC-CCCCcEEEEEEeCCCCCCCchHHHH
Q 019298 196 QKLAETANKL-KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVE 273 (343)
Q Consensus 196 ~~l~~~~~~~-~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~~ 273 (343)
++|.++|++| |+++|+|++|..+... ..+.. ..+++.|+||+|+ .+| +|+++++ +++++
T Consensus 150 ~~i~~la~~~p~~~li~D~a~~~~~~~----~~~~~-----~d~~~~s~~K~~~~~~G--~g~~~~~--------~~~~~ 210 (362)
T 3ffr_A 150 EDINTFRDKNKDALIFVDAVSSLPYPK----FDWTK-----IDSVFFSVQKCFGLPAG--LGVWILN--------DRVIE 210 (362)
T ss_dssp HHHTTSGGGSTTSEEEEECTTTTTSSC----CCTTS-----CSEEEEETTSTTCCCSC--CEEEEEE--------HHHHH
T ss_pred HHHHHHHHhCCCCEEEEecccccCCcc----cChhH-----CcEEEEecccccCCCCc--eEEEEEC--------HHHHH
Confidence 7788889999 9999999999864321 11111 3388999999998 677 5677764 35666
Q ss_pred HHhhhhc----------------------cccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298 274 RMKKYFD----------------------ILGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 274 ~l~~~~~----------------------~~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
+++.... ..+.++...+.++ ..++... ..+-+.+++++++++.+.+.|+++||+.
T Consensus 211 ~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 289 (362)
T 3ffr_A 211 KSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLL-GKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFS 289 (362)
T ss_dssp HHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred HhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHH-HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCce
Confidence 6655431 1344555555555 4444321 1123378888999999999999998988
Q ss_pred eeCC----CCceEeeec
Q 019298 330 NFKS----TGSSLKYLD 342 (343)
Q Consensus 330 ~~~~----~~g~~~~~~ 342 (343)
+..+ ..+..+|+.
T Consensus 290 ~~~~~~~~~~~~~~~~~ 306 (362)
T 3ffr_A 290 FGVEDAKLRSMTTIVAN 306 (362)
T ss_dssp ESSSCGGGBCSSEEEEE
T ss_pred eccCChhhcCCceEEEe
Confidence 6552 234555553
No 152
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.93 E-value=1.5e-24 Score=198.46 Aligned_cols=254 Identities=15% Similarity=0.084 Sum_probs=175.5
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~ 130 (343)
.++++.+.+++.+++.. .|.+ +..++.+.+.+++.+.+|.+.+.+.+++++|+++++..++++++++||+|+++
T Consensus 28 ~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~ 101 (376)
T 3f0h_A 28 VMSSEEVRAIGAEQVPY----FRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVI 101 (376)
T ss_dssp CCCCHHHHHHHTSCCCC----CSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEE
T ss_pred CCCcHHHHHHhcCCCCC----CCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEE
Confidence 56788888887765421 2222 23355555555555545543223445568999999999999999999999999
Q ss_pred CCCCcchH--HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcE
Q 019298 131 RPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (343)
Q Consensus 131 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 208 (343)
+|+|.+.. ..+...|.++..++.+ .++.+|++++++.++++++++++++|+||||.+++ +++|+++|++||++
T Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 176 (376)
T 3f0h_A 102 DGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD---TMMIGEFCKKNNMF 176 (376)
T ss_dssp ESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC---HHHHHHHHHHTTCE
T ss_pred eCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC---HHHHHHHHHHcCCE
Confidence 99776643 3466678899888875 35679999999988888999999999999999988 78889999999999
Q ss_pred EEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC-CCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-------
Q 019298 209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD------- 280 (343)
Q Consensus 209 ~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~------- 280 (343)
+|+|++|..+... ..+... +..+++.|+||+++ .+| +|+++++ +++++++.....
T Consensus 177 li~D~~~~~~~~~----~~~~~~---~~d~~~~s~~K~l~~~~G--~g~~~~~--------~~~~~~~~~~~~~~~~~~~ 239 (376)
T 3f0h_A 177 FVCDCVSAFLADP----FNMNEC---GADVMITGSQKVLACPPG--ISVIVLA--------PRGVERVEKSKVRTMYFDL 239 (376)
T ss_dssp EEEECTTTTTTSC----CCHHHH---TCSEEEEETTTTTCCCSS--CEEEEEC--------HHHHHHHHTCCCCCSTTCH
T ss_pred EEEEcCccccCcc----cccccc---CccEEEecCcccccCCCc--eEEEEEC--------HHHHHHhhcCCCCceeecH
Confidence 9999999864321 111111 23489999999988 566 5777774 367777764211
Q ss_pred -----------cccCcchHHHHHHHhccchhhHH---HHHHHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298 281 -----------ILGDPATFIQVCIMYGCLSTIMQ---IMIHGNFLENFAGSCVPSYKLIPELINFKST 334 (343)
Q Consensus 281 -----------~~~~~~~~~~~a~~~~~l~~~~~---~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~ 334 (343)
....++.....++ .+++....+ +-+.+++++++++.+.+.|+++ |+.+..+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~ 305 (376)
T 3f0h_A 240 KDALKNQERGQTPFTPAVGILLQI-NERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELVSES 305 (376)
T ss_dssp HHHHHHHTTTCCSSCCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEECCSS
T ss_pred HHHHhhcccCCCCCCCcHHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccCccc
Confidence 0122333222333 333332222 2337888889999999999988 67654443
No 153
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.93 E-value=3e-24 Score=201.93 Aligned_cols=290 Identities=14% Similarity=0.059 Sum_probs=189.9
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||+.|... ..++ .+|.+.+++.+++.+... .|....+..++++++++.+.+.. +.+.++|++++|+++
T Consensus 49 ~G~~~lD~~~~~~~--~~lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~--~~~~~~v~~~~gGse 123 (460)
T 3gju_A 49 NGRKSIDAFAGLYC--VNVGYGRQKIADAIATQAKNLAY-YHAYVGHGTEASITLAKMIIDRA--PKGMSRVYFGLSGSD 123 (460)
T ss_dssp TCCEEEETTHHHHT--CTTCBCCHHHHHHHHHHHHHHSC-CCCCTTCCCHHHHHHHHHHHHHS--CTTEEEEEEESSHHH
T ss_pred CCCEEEECCcchhh--ccCCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHhhC--CCCcCEEEEeCchHH
Confidence 37788999988432 2233 579999999998875321 34444455567777777776643 346789999999999
Q ss_pred HHHHHHHHhcC--------CCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCC--C-CCCCCC-----
Q 019298 112 AIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP--D-KGWEVD----- 162 (343)
Q Consensus 112 al~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~d----- 162 (343)
++..+++.+.. .+++|++.+|+|+++...+...+. .+..++... . ++.+.+
T Consensus 124 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 203 (460)
T 3gju_A 124 ANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFS 203 (460)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHH
Confidence 99999998863 468999999999887665554422 233333211 0 112233
Q ss_pred ---HHHHHhhhcC---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 163 ---LDDIESLADQ---NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 163 ---~~~l~~~~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
+++|++.+.. +..++++++| +|++|. +++.+.+++|.++|++||+++|+||+|.++...+.. .....++..
T Consensus 204 ~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~-~~~~~~~~~ 282 (460)
T 3gju_A 204 QHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTM-FGSDHYGIK 282 (460)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccc-chHhhcCCC
Confidence 5788887752 3334455555 677776 678889999999999999999999999987655432 112222222
Q ss_pred CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh-------h-hccccCcchHHHHHHHhccchhh--HHH
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK-------Y-FDILGDPATFIQVCIMYGCLSTI--MQI 304 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~-------~-~~~~~~~~~~~~~a~~~~~l~~~--~~~ 304 (343)
.+ +.+|||+++..++|+||++++ +++++.+.. . ...+++.++++++++ .++|+.. ..+
T Consensus 283 pd---i~t~sK~l~gG~~~lg~v~~~--------~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~~~~ 350 (460)
T 3gju_A 283 PD---LITIAKGLTSAYAPLSGVIVA--------DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAG-VANLELIDEMDL 350 (460)
T ss_dssp CS---EEEECGGGTTTSSCCEEEEEE--------HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHH-HHHHHHHHHTTH
T ss_pred CC---eeeeehhhcCCCCCeEEEEEC--------HHHHHHHhcccccccccccCCCCCCCHHHHHHH-HHHHHHHHhccH
Confidence 23 236899976533899999985 478888853 1 223567888888888 5666521 233
Q ss_pred HH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298 305 MI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL 341 (343)
Q Consensus 305 l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~ 341 (343)
++ .++..+..++.+.+.+.++|.+....+.| .|+++
T Consensus 351 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~ 387 (460)
T 3gju_A 351 VTNAGETGAYFRAELAKAVGGHKNVGEVRGDG-MLAAV 387 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTEEEEEEET-TEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEeeee-EEEEE
Confidence 33 44455555666666666776555434444 45444
No 154
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.93 E-value=1e-24 Score=204.41 Aligned_cols=289 Identities=16% Similarity=0.127 Sum_probs=188.1
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT-AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
+..++|++.+.+....++ .+|.+.+++.+++.... +... .+..++++.+++.+.+.+ +.++++|++++|++++
T Consensus 49 g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~--~~~~~~v~~~~ggsea 122 (449)
T 3a8u_X 49 GRKVYDSLSGLWTCGAGH-TRKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLT--PGNLNHVFFTDSGSEC 122 (449)
T ss_dssp CCEEEETTHHHHTCTTCB-SCHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTS--STTEEEEEEESSHHHH
T ss_pred CCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhC--CCCCCEEEEcCcHHHH
Confidence 567889987764321222 37999999999986532 2111 233456666666665543 3467899999999999
Q ss_pred HHHHHHHhcC--------CCCeEEEeCCCCcchHH-HHHhcCc------------eeEEeecCC--CCC-CCCC------
Q 019298 113 IDVAMALLSR--------PGANILLPRPGFPIYEL-SAAFRHI------------EVRHFDLLP--DKG-WEVD------ 162 (343)
Q Consensus 113 l~~~~~~l~~--------~gd~vl~~~p~~~~~~~-~~~~~g~------------~~~~~~~~~--~~~-~~~d------ 162 (343)
+..+++.+.. ++|+|++.+|+|+++.. .....|. ++..++... ... .++|
T Consensus 123 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~ 202 (449)
T 3a8u_X 123 ALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGI 202 (449)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHH
Confidence 9999988764 67999999999987643 3443331 233343321 111 1246
Q ss_pred --HHHHHhhhcC---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298 163 --LDDIESLADQ---NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (343)
Q Consensus 163 --~~~l~~~~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~ 235 (343)
+++|++.++. +...+++++| +|+||. ..+.+.+++|.++|++||+++|+||+|.++.+.+.. ..+..++...
T Consensus 203 ~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~~ 281 (449)
T 3a8u_X 203 ALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSM-FGADSFGVTP 281 (449)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcc-hhhhhcCCCC
Confidence 8999988863 2335566777 478997 567899999999999999999999999876544431 1222222222
Q ss_pred CEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh----------hccccCcchHHHHHHHhccchhhHHH
Q 019298 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY----------FDILGDPATFIQVCIMYGCLSTIMQI 304 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~a~~~~~l~~~~~~ 304 (343)
+++ |+||.|+. | +|+||++++ +++++.+... ...+++.++++++++ .++|+...+
T Consensus 282 di~---s~sK~l~~-G~~~~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~-~aal~~~~~- 347 (449)
T 3a8u_X 282 DLM---CIAKQVTN-GAIPMGAVIAS--------TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAG-LAALCLLQK- 347 (449)
T ss_dssp SEE---EECGGGGT-TSSCCEEEEEE--------HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHH-HHHHHHHHH-
T ss_pred CEE---EEcccccC-CCCceEEEEEC--------HHHHHHhhccCcccccccccccCCCcccHHHHHHH-HHHHHHHHh-
Confidence 333 88999875 7 999999985 3678877653 122456678877777 455432111
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcee--eCCCCceEeeecC
Q 019298 305 MIHGNFLENFAGSCVPSYKLIPELIN--FKSTGSSLKYLDL 343 (343)
Q Consensus 305 l~~~~~~~~~~~~~~~~L~~~~g~~~--~~~~~g~~~~~~l 343 (343)
.+..++++++++.+.+.|++++++.. ..+..|+|+|+++
T Consensus 348 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~ 388 (449)
T 3a8u_X 348 ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQI 388 (449)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEE
Confidence 12677788888888888876533331 1234567888753
No 155
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.93 E-value=3.8e-24 Score=199.96 Aligned_cols=274 Identities=13% Similarity=0.044 Sum_probs=188.6
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
++.++||+.|... ..++ .+|.+.+++.+++..... ..|. .....++++.+++++ ..+++++++|++
T Consensus 75 g~~ylD~~sg~~~--~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~sGs 143 (439)
T 2oat_A 75 GRKYFDFLSSYSA--VNQGHCHPKIVNALKSQVDKLTLTSRAFY-NNVLGEYEEYITKLF--------NYHKVLPMNTGV 143 (439)
T ss_dssp CCEEEESSGGGGT--TTTCBTCHHHHHHHHHHHTTCSCCCTTSE-ESSHHHHHHHHHHHH--------TCSEEEEESSHH
T ss_pred CCEEEEccCCccc--ccCCCCCHHHHHHHHHHHHhcCcccCccC-CHHHHHHHHHHHHhc--------CCCEEEEeCCHH
Confidence 5678899888643 3466 889999999999875321 1232 234567778887776 258999999999
Q ss_pred HHHHHHHHHhc---------CCC-CeEEEeCCCCcchHH-HHHhcC------------ceeEEeecCCCCCCCCCHHHHH
Q 019298 111 QAIDVAMALLS---------RPG-ANILLPRPGFPIYEL-SAAFRH------------IEVRHFDLLPDKGWEVDLDDIE 167 (343)
Q Consensus 111 ~al~~~~~~l~---------~~g-d~vl~~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~ 167 (343)
+++..+++.+. .+| |.|++.+|+|+++.. .....| .++..++. .|+++|+
T Consensus 144 eA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le 216 (439)
T 2oat_A 144 EAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALE 216 (439)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHH
Confidence 99999998864 356 899999999977543 334334 24444432 2799999
Q ss_pred hhhc-CCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCc
Q 019298 168 SLAD-QNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244 (343)
Q Consensus 168 ~~~~-~~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 244 (343)
+.++ ++++ +++++| +|++|. .++.+++++|.++|++||+++|+||+|.++.+.+... .+..++...+++ |+|
T Consensus 217 ~~l~~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di~---t~s 291 (439)
T 2oat_A 217 RALQDPNVA-AFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LLG 291 (439)
T ss_dssp HHTTSTTEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EEC
T ss_pred HHhCCCCEE-EEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcEE---Eec
Confidence 9985 4454 455566 578896 4688999999999999999999999998775544321 112222222322 899
Q ss_pred cccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhh
Q 019298 245 KRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSY 322 (343)
Q Consensus 245 K~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L 322 (343)
|.++ +| +|+||+++++ ++++.++.. ...+++.++++++++ .++|+...+ .+..++++++++.+.+.|
T Consensus 292 K~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa-~aal~~~~~-~~~~~~~~~~~~~l~~~L 360 (439)
T 2oat_A 292 KALS-GGLYPVSAVLCDD--------DIMLTIKPGEHGSTYGGNPLGCRVA-IAALEVLEE-ENLAENADKLGIILRNEL 360 (439)
T ss_dssp GGGG-TTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHH
T ss_pred cccc-CCCCCeEEEEECH--------HHHhccCCCCcccCCCcCHHHHHHH-HHHHHHHhh-hhHHHHHHHHHHHHHHHH
Confidence 9987 48 9999999953 566666543 223456788887777 455442211 126788889999999999
Q ss_pred cCCCCcee--eCCCCceEeeec
Q 019298 323 KLIPELIN--FKSTGSSLKYLD 342 (343)
Q Consensus 323 ~~~~g~~~--~~~~~g~~~~~~ 342 (343)
+++ ++.+ ..+..|+++|++
T Consensus 361 ~~l-~~~~~~~~~~~g~~~~v~ 381 (439)
T 2oat_A 361 MKL-PSDVVTAVRGKGLLNAIV 381 (439)
T ss_dssp TTS-CTTTEEEEEEETTEEEEE
T ss_pred HHh-cCCCcEEEEeeeeEEEEE
Confidence 886 4442 123356777765
No 156
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.93 E-value=2.3e-24 Score=202.57 Aligned_cols=289 Identities=12% Similarity=0.075 Sum_probs=189.2
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||+.+... +.++ .+|.+.+++.+++.+... .|....+..+.++++++++.+.++ .+.++|++++|+++
T Consensus 48 ~g~~ylD~~~~~~~--~~lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggse 122 (459)
T 4a6r_A 48 EGNKIIDGMAGLWC--VNVGYGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSE 122 (459)
T ss_dssp TCCEEEETTHHHHT--CTTCBCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHH
T ss_pred CCCEEEECCCchhc--ccCCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHH
Confidence 36788999988533 2233 579999999999875432 344434556777778887776543 46789999999999
Q ss_pred HHHHHHHHhcC--------CCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCC--C-CCCCCC-----
Q 019298 112 AIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP--D-KGWEVD----- 162 (343)
Q Consensus 112 al~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~d----- 162 (343)
++..+++.+.. ++++|++.+|+|+++...+...+. .+..++... . +.+ +|
T Consensus 123 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~ 201 (459)
T 4a6r_A 123 SVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFG 201 (459)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHH
Confidence 99999999875 578999999999988766555432 222232111 0 111 34
Q ss_pred ---HHHHHhhhcC---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 163 ---LDDIESLADQ---NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 163 ---~~~l~~~~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
+++|++.+.. +..++++++| +|++|. .++.+.+++|.++|++||+++|+||+|.++...+.. .....++..
T Consensus 202 ~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~-~~~~~~~~~ 280 (459)
T 4a6r_A 202 VVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEW-FGHQHFGFQ 280 (459)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccc-chHhhcCCC
Confidence 7888887752 3456666677 455565 458899999999999999999999999988665532 122222222
Q ss_pred CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh---hh-hccccCcchHHHHHHHhccchhh--HHHHH-H
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK---KY-FDILGDPATFIQVCIMYGCLSTI--MQIMI-H 307 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~---~~-~~~~~~~~~~~~~a~~~~~l~~~--~~~l~-~ 307 (343)
.+++ +|||+++..|+|+||++++ +++++.+. .. ...+++.++++++++ .++|+.. ..+++ .
T Consensus 281 pdi~---t~sK~l~gg~~~lg~v~~~--------~~i~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~~~~~~~~ 348 (459)
T 4a6r_A 281 PDLF---TAAKGLSSGYLPIGAVFVG--------KRVAEGLIAGGDFNHGFTYSGHPVCAAVA-HANVAALRDEGIVQRV 348 (459)
T ss_dssp CSEE---EECGGGGTTSSCCEEEEEC--------HHHHHHHHHHCTTHHHHHHCSCHHHHHHH-HHHHHHHHHTCHHHHH
T ss_pred CCee---ehhhhhcCCCCCccceeeC--------HHHHHHhhcCCCcccCCCCCCCHHHHHHH-HHHHHHHhcchHHHHH
Confidence 2333 6799987766999999985 47888876 22 223567888888888 5555421 12222 2
Q ss_pred H-HHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298 308 G-NFLENFAGSCVPSYKLIPELINFKSTGSSLKYL 341 (343)
Q Consensus 308 ~-~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~ 341 (343)
+ +..+..++.+.+.|..+|.+....+.| .|+++
T Consensus 349 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~ 382 (459)
T 4a6r_A 349 KDDIGPYMQKRWRETFSRFEHVDDVRGVG-MVQAF 382 (459)
T ss_dssp HHTHHHHHHHHHHHHHTTCTTEEEEEEET-TEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEEEEE-EEEEE
Confidence 2 233334444444555565555444444 44444
No 157
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.93 E-value=3.8e-24 Score=197.53 Aligned_cols=214 Identities=18% Similarity=0.137 Sum_probs=160.3
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~ 152 (343)
....++++.++++++ .++.++++++++++..++++++++||+|+++.|+|+++...+ ...|.++..++
T Consensus 65 ~~~~~l~~~la~~~g--------~~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 136 (398)
T 1gc0_A 65 PTLNLLEARMASLEG--------GEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVD 136 (398)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEEC
T ss_pred hHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEEC
Confidence 456788899988883 235566666689999999999999999999999999887765 56788888876
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
. .|++++++.++++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|..+.+.. ++ .
T Consensus 137 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~-- 199 (398)
T 1gc0_A 137 M-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-E-- 199 (398)
T ss_dssp T-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-G--
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-h--
Confidence 4 2799999999888999999999999999975 7888999999999999999999765432 11 1
Q ss_pred CCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHH-HHhhhhcc--ccCcchHHHHHHHhccchhhHHHHHHH
Q 019298 233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVE-RMKKYFDI--LGDPATFIQVCIMYGCLSTIMQIMIHG 308 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~-~l~~~~~~--~~~~~~~~~~a~~~~~l~~~~~~l~~~ 308 (343)
.+.++++.|+||.|+++|.|+ ||+++++ ++++ .++..... .+..+++.+.++ ...++. +....
T Consensus 200 -~~~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~---~~~~~ 266 (398)
T 1gc0_A 200 -LGADLVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALL-MRGIKT---LNLRM 266 (398)
T ss_dssp -GTCSEEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHH-HHHHTT---HHHHH
T ss_pred -hCceEEEECCccccCCCCCCeEEEEEECh--------HHHHHHHHHHhhccCCCCCCHHHHHHH-Hhccch---HHHHH
Confidence 234599999999999999998 9988853 4444 45544332 345677766665 333322 22355
Q ss_pred HHHHHHHHHHHHhhcCCCCc
Q 019298 309 NFLENFAGSCVPSYKLIPEL 328 (343)
Q Consensus 309 ~~~~~~~~~~~~~L~~~~g~ 328 (343)
++..++.+.+.+.|+++|++
T Consensus 267 ~~~~~~~~~l~~~L~~~~~v 286 (398)
T 1gc0_A 267 DRHCANAQVLAEFLARQPQV 286 (398)
T ss_dssp HHHHHHHHHHHHHHHTCTTE
T ss_pred HHHHHHHHHHHHHHhcCCCe
Confidence 66667777777777665443
No 158
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.93 E-value=5.7e-25 Score=206.43 Aligned_cols=276 Identities=16% Similarity=0.061 Sum_probs=176.9
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
+..++||+.+.+....++ .+|.+.+++.+++.... .| .+..++++++++++.+.++ .+++|++++|+++++
T Consensus 56 g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~---~~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA~ 126 (453)
T 2cy8_A 56 GNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QY---AASHPLEVRWAERIVAAFP---SIRKLRFTGSGTETT 126 (453)
T ss_dssp CCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SS---CSSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHHH
T ss_pred CCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHHH
Confidence 567899998875422222 78999999999987532 23 2456899999999987654 578999999999999
Q ss_pred HHHHHH---hcCCCCeEEEeCCCCcchHHHHHh-----------cCce------eEEeecCCCCCCCCCHHHHHhhhcC-
Q 019298 114 DVAMAL---LSRPGANILLPRPGFPIYELSAAF-----------RHIE------VRHFDLLPDKGWEVDLDDIESLADQ- 172 (343)
Q Consensus 114 ~~~~~~---l~~~gd~vl~~~p~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~d~~~l~~~~~~- 172 (343)
..+++. +.++ +.|++.+|+|+++...+.. .|.. +..++. .|+++|++.+++
T Consensus 127 ~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~ 198 (453)
T 2cy8_A 127 LLALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANH 198 (453)
T ss_dssp HHHHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhc
Confidence 999988 6654 6888888999866543322 1221 222211 379999988863
Q ss_pred -CceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC
Q 019298 173 -NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249 (343)
Q Consensus 173 -~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 249 (343)
....+++++| +||||.+. +.+++++|.++|++||+++|+||+|.++ ..+. ......++...+ +.|+||+++.
T Consensus 199 ~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~d---i~s~sK~l~~ 273 (453)
T 2cy8_A 199 GSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN-HGMQALLDVQPD---LTCLAKASAG 273 (453)
T ss_dssp GGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT-THHHHHHTCCCS---EEEEEGGGGT
T ss_pred CCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc-hhhhHHhCCCCc---EEEEChhhhC
Confidence 2335566777 47799764 7999999999999999999999999987 4332 111111221122 2389999885
Q ss_pred CCCcEEEEEEeCCCCCCCchHHHHHHhh---h---hccccCcchHHHHHHHhccchh-hHHHHHHHHHHHHHHHHHHHhh
Q 019298 250 PGWRLGWFVTTDPCGMFRKPKVVERMKK---Y---FDILGDPATFIQVCIMYGCLST-IMQIMIHGNFLENFAGSCVPSY 322 (343)
Q Consensus 250 ~G~r~G~i~~~~~~~~~~~~~~~~~l~~---~---~~~~~~~~~~~~~a~~~~~l~~-~~~~l~~~~~~~~~~~~~~~~L 322 (343)
|+|+||+++++ ++++.+.. . ...+++.++++++++ .++|+. . .-+..++++++++.+.+.|
T Consensus 274 -G~~~G~v~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~-~aal~~~~--~~~~~~~~~~~~~~l~~~L 341 (453)
T 2cy8_A 274 -GLPGGILGGRE--------DVMGVLSRGSDRKVLHQGTFTGNPITAAAA-IAAIDTIL--EDDVCAKINDLGQFAREAM 341 (453)
T ss_dssp -TSSCEEEEECH--------HHHTTSSSCC---------CCCCHHHHHHH-HHHHHHHH--HTTHHHHHHHHHHHHHHHH
T ss_pred -CcceEEEechH--------HHHHHhccccCCCceeCCCCCCCHHHHHHH-HHHHHHHh--hhhHHHHHHHHHHHHHHHH
Confidence 99999999853 56666654 1 222456788888777 555543 2 1125667777777777777
Q ss_pred cCCC---CceeeCCCCceEeeecC
Q 019298 323 KLIP---ELINFKSTGSSLKYLDL 343 (343)
Q Consensus 323 ~~~~---g~~~~~~~~g~~~~~~l 343 (343)
+++. ++....+..|.++|+++
T Consensus 342 ~~~~~~~~~~~~~~~~g~~~~i~~ 365 (453)
T 2cy8_A 342 NHLFARKGLNWLAYGRFSGFHLMP 365 (453)
T ss_dssp HHHHHHTTCCEEEECCTTEEEEEE
T ss_pred HHHHhhCCCcEEEEEeeeEEEEEE
Confidence 5431 23321234566778753
No 159
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.93 E-value=4.5e-24 Score=196.56 Aligned_cols=216 Identities=16% Similarity=0.126 Sum_probs=167.8
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~ 152 (343)
....++++.++++++ .+++++++|+++++..++++++++||+|+++.|+|+++...+ ...|.++..++
T Consensus 66 ~~~~~l~~~la~~~g--------~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 137 (392)
T 3qhx_A 66 PTRTALEAALAAVED--------AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVA 137 (392)
T ss_dssp HHHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred hHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeC
Confidence 345678889988873 347899999999999999999999999999999998776665 66788888886
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
.+ |++++++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.+.... +. .
T Consensus 138 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~----~~-~-- 200 (392)
T 3qhx_A 138 LA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQ----PL-S-- 200 (392)
T ss_dssp TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC----GG-G--
T ss_pred CC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCC----hH-H--
Confidence 52 799999999989999999999999999965 7888999999999999999998643221 11 1
Q ss_pred CCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298 233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNF 310 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~ 310 (343)
.+..+++.|+||.++.+| .++||+++++ +++.+.++.... .....++..+.++ ...+. .+....++
T Consensus 201 -~~~di~~~S~sK~lg~~g~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~-~~~l~---~l~~~~~~ 268 (392)
T 3qhx_A 201 -LGADVVLHSTTKYIGGHSDVVGGALVTND-------EELDQSFAFLQNGAGAVPGPFDAYLT-MRGLK---TLVLRMQR 268 (392)
T ss_dssp -GTCSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHT---THHHHHHH
T ss_pred -hCCcEEEEcCccccCCCCCceEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hhhhh---HHHHHHHH
Confidence 134499999999999988 7999999853 467777776643 3456677766666 23332 12235667
Q ss_pred HHHHHHHHHHhhcCCCCce
Q 019298 311 LENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 311 ~~~~~~~~~~~L~~~~g~~ 329 (343)
..++.+.+.+.|+.+|++.
T Consensus 269 ~~~~~~~l~~~L~~~~~v~ 287 (392)
T 3qhx_A 269 HSENAAAVAEFLAEHPAIS 287 (392)
T ss_dssp HHHHHHHHHHHHHTCTTEE
T ss_pred HHHHHHHHHHHHhcCCCcc
Confidence 7788888888888877765
No 160
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.93 E-value=1.6e-24 Score=201.01 Aligned_cols=279 Identities=14% Similarity=0.077 Sum_probs=178.8
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 108 (343)
...++|..+. ...++.+++++.+++.+.....|+ ......++++.+.+.+.+.+| .++++|++++|
T Consensus 25 ~~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG 96 (417)
T 3n0l_A 25 CEGLEMIASE------NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG 96 (417)
T ss_dssp HHSEECCTTC------CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH
T ss_pred hcCeeeeccc------CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH
Confidence 3567886655 234899999998887443222333 222224555544334433333 45667888777
Q ss_pred hHHHHHHHHHHhcCCCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCC
Q 019298 109 CTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGN 184 (343)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~n 184 (343)
++++..++++++++||+|+++.|+|..+.. .....|..+..+++..++++.+|+++|+++++ +++++|++++|+|
T Consensus 97 -t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~ 175 (417)
T 3n0l_A 97 -SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY 175 (417)
T ss_dssp -HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC
T ss_pred -HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc
Confidence 799999999999999999999999977544 33334444433333333567799999999997 5889988888886
Q ss_pred CcccccCHHHHHHHHHHHhhcCcEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (343)
Q Consensus 185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~ 263 (343)
|..++ +++|.++|++||+++|+|++|. +..+.+..+..+. ...++++|+||+| +|.|+||+++++
T Consensus 176 --G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~-- 241 (417)
T 3n0l_A 176 --ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTND-- 241 (417)
T ss_dssp --CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESC--
T ss_pred --CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECC--
Confidence 77766 7888999999999999999964 3444433222221 2348999999996 788899999863
Q ss_pred CCCCchHHHHHHhhhhcc--ccCcchHHHHHHHhccchh-h-HHHHHHHHHHHHHHHHHHHhhcCCCCceeeC-CCCceE
Q 019298 264 GMFRKPKVVERMKKYFDI--LGDPATFIQVCIMYGCLST-I-MQIMIHGNFLENFAGSCVPSYKLIPELINFK-STGSSL 338 (343)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~~l~~-~-~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~-~~~g~~ 338 (343)
+++++.++..... ..+++.....++ ..++.. . ..+.+.++++.++++.+.+.|.+. |+.+.. +..+++
T Consensus 242 -----~~~~~~~~~~~~~~~~~~~~~~~~aa~-~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 314 (417)
T 3n0l_A 242 -----EELAKKINSAIFPGIQGGPLMHVIAAK-AVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHL 314 (417)
T ss_dssp -----HHHHHHHHHHHTTTTCSSCCHHHHHHH-HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred -----HHHHHHHhhhhCCcccCCcHHHHHHHH-HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceE
Confidence 4677877766432 223344444444 333332 1 233448888888999999999884 787533 356777
Q ss_pred eeecC
Q 019298 339 KYLDL 343 (343)
Q Consensus 339 ~~~~l 343 (343)
+|+++
T Consensus 315 ~~~~~ 319 (417)
T 3n0l_A 315 VLMSF 319 (417)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 77753
No 161
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.93 E-value=1.4e-24 Score=200.66 Aligned_cols=193 Identities=15% Similarity=0.096 Sum_probs=147.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCc
Q 019298 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHI 146 (343)
Q Consensus 71 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~ 146 (343)
..|+. .+..+|+++++++++. . +.|++++| ++++..+++ ++++||+|+++.|+|++.... ++..|.
T Consensus 62 ~r~~~-p~~~~l~~~la~~~g~------~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 131 (403)
T 3cog_A 62 SRSGN-PTRNCLEKAVAALDGA------K-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGL 131 (403)
T ss_dssp ----C-HHHHHHHHHHHHHHTC------S-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTC
T ss_pred cCCCC-chHHHHHHHHHHHhCC------C-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCC
Confidence 34544 4668999999999942 2 55666655 699999998 889999999999999875443 356788
Q ss_pred eeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC-cEEEEccCCCccccCCCCC
Q 019298 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK-TLVIADEVYGHLVFGDKPF 225 (343)
Q Consensus 147 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~-~~~i~D~ay~~~~~~~~~~ 225 (343)
+++.++.+ |++++++++++++++|++++|+||||.+++ +++|+++|+++| +++|+|++|..+.+..
T Consensus 132 ~v~~v~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~~--- 198 (403)
T 3cog_A 132 KISFVDCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQR--- 198 (403)
T ss_dssp EEEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTCC---
T ss_pred EEEEECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccCC---
Confidence 98888653 789999999888999999999999999986 788899999999 9999999999865431
Q ss_pred CcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccch
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLS 299 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~ 299 (343)
++. .+.+++++|+||.|+++| .|+||+++++ ++++++++..... ....+++.+.++ ...+.
T Consensus 199 -~~~----~~~div~~S~sK~~~g~~~~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~~~~~-~~~l~ 261 (403)
T 3cog_A 199 -PLA----LGADISMYSATKYMNGHSDVVMGLVSVNC-------ESLHNRLRFLQNSLGAVPSPIDCYLC-NRGLK 261 (403)
T ss_dssp -TTT----TTCSEEEEETTTTTTCSSCCCCEEEEECC-------HHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHT
T ss_pred -ccc----cCCeEEEEcChhhccCCCCCeEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hhhhh
Confidence 111 245699999999999876 4799999853 4677888766432 345677777666 33443
No 162
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.93 E-value=3.2e-24 Score=197.43 Aligned_cols=257 Identities=16% Similarity=0.152 Sum_probs=180.6
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
-.++++|+.+.|. .++.+.+++.+.+... .|. +..+..++|++++++++ .+++++++|++++
T Consensus 21 ~~~~~~l~~~~p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~gt~a 83 (391)
T 3dr4_A 21 MSDLPRISVAAPR------LDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCG--------VKHAIACNNGTTA 83 (391)
T ss_dssp -------CCCCCC------CCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHT--------CSEEEEESSHHHH
T ss_pred cCCCceeccCCCC------CCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHH
Confidence 4567888888853 3477888888877653 455 56788999999999993 3488899999999
Q ss_pred HHHHHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298 113 IDVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (343)
Q Consensus 113 l~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~ 191 (343)
+..++.++ .++||+|+++.|+|..+...++..|.+++.+++++ +++.+|++++++.+++++++++ ++||||...
T Consensus 84 l~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~- 158 (391)
T 3dr4_A 84 LHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQIC- 158 (391)
T ss_dssp HHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCC-
T ss_pred HHHHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChh-
Confidence 99999999 89999999999999999999999999999998865 3578999999999987777766 678999984
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc-cCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 270 (343)
++++|.++|+++|+++|+|++|+... +.+.. ...+. .+.+.||||..+++|.+.|++++++ ++
T Consensus 159 --~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~----di~~~S~s~~K~l~~g~gg~~~~~~-------~~ 222 (391)
T 3dr4_A 159 --DMDPILEVARRHNLLVIEDAAEAVGATYRGKK---SGSLG----DCATFSFFGNAIITTGEGGMITTND-------DD 222 (391)
T ss_dssp --CHHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS----SEEEEECBTTSSSCCBSCEEEEESC-------HH
T ss_pred --hHHHHHHHHHHcCCEEEEECcccccceECCee---ecccC----CEEEEECCCCCcCCcCCeEEEEECC-------HH
Confidence 47778889999999999999998632 22221 11111 1778887744344556789988854 45
Q ss_pred HHHHHhhhhccc---------------cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 271 VVERMKKYFDIL---------------GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 271 ~~~~l~~~~~~~---------------~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
+.++++...... ...+....++. ...+ ..+-+..++.+++++.+.+.|.++ |+.+..+
T Consensus 223 ~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~-~~~~---~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 295 (391)
T 3dr4_A 223 LAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIG-LAQL---ERVDEHLAARERVVGWYEQKLARL-GNRVTKP 295 (391)
T ss_dssp HHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHH-HHHH---HTHHHHHHHHHHHHHHHHHHHGGG-TTSEECC
T ss_pred HHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhhcC-CccccCc
Confidence 776666553211 12233322222 1111 222336677777788888888887 7775443
No 163
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.93 E-value=1.2e-24 Score=202.99 Aligned_cols=274 Identities=16% Similarity=0.152 Sum_probs=175.0
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
++.++||+.|... ..++ .+|.+.+++.+++..... ..|+ .....++++.+++++ ..++|++++|++
T Consensus 64 G~~ylD~~~g~~~--~~lgh~~p~v~~ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~sGs 132 (433)
T 1z7d_A 64 DKRYYDFLSAYSS--VNQGHCHPNILNAMINQAKNLTICSRAFF-SVPLGICERYLTNLL--------GYDKVLMMNTGA 132 (433)
T ss_dssp CCEEEESSHHHHT--TTTCBTCHHHHHHHHHHHTTCSCCCTTSE-EHHHHHHHHHHHHHH--------TCSEEEEESSHH
T ss_pred CCEEEEcccchhh--cccCCCCHHHHHHHHHHHHhCCCccCCcC-CHHHHHHHHHHHhhc--------CCCeEEEeCCHH
Confidence 5678899887533 3466 889999999999875321 1221 122345666666655 368999999999
Q ss_pred HHHHHHHHHhc---------CCC-CeEEEeCCCCcchHHH-HHhcC------------ceeEEeecCCCCCCCCCHHHHH
Q 019298 111 QAIDVAMALLS---------RPG-ANILLPRPGFPIYELS-AAFRH------------IEVRHFDLLPDKGWEVDLDDIE 167 (343)
Q Consensus 111 ~al~~~~~~l~---------~~g-d~vl~~~p~~~~~~~~-~~~~g------------~~~~~~~~~~~~~~~~d~~~l~ 167 (343)
+++..+++.+. .+| +.|++.+|+|+++... ....| .++..++. .|+++|+
T Consensus 133 eA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le 205 (433)
T 1z7d_A 133 EANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALE 205 (433)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHHH
Confidence 99999998753 367 9999999999876442 23223 12333332 2799999
Q ss_pred hhh-cCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCc
Q 019298 168 SLA-DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244 (343)
Q Consensus 168 ~~~-~~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 244 (343)
+++ ++++++ ++++| +|++|.+ ++.+++++|.++|++||+++|+||+|.++.+.+.. ..+..++...+++ |+|
T Consensus 206 ~~l~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~-~~~~~~~~~~di~---t~s 280 (433)
T 1z7d_A 206 EELKDPNVCA-FIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKL-LCVHHYNVKPDVI---LLG 280 (433)
T ss_dssp HHHTSTTEEE-EEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EEC
T ss_pred HHhCCCCEEE-EEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcc-hhhHhcCCCCCEE---EEC
Confidence 998 455555 45556 6779975 68889999999999999999999999876554432 1112222222332 899
Q ss_pred cccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhh
Q 019298 245 KRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSY 322 (343)
Q Consensus 245 K~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L 322 (343)
|.++ +| +|+||+++++ ++++.+... ...+++.++++++++ .++|+...+ .+..++++++++.+.+.|
T Consensus 281 K~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa-~aal~~~~~-~~~~~~~~~~~~~l~~~L 349 (433)
T 1z7d_A 281 KALS-GGHYPISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASIC-VEALNVLIN-EKLCENAEKLGGPFLENL 349 (433)
T ss_dssp GGGG-TTSSCCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHH
T ss_pred cccc-CCCCCeEEEEECH--------HHHhhhccccccccCCCCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHH
Confidence 9988 79 9999999853 566665543 223456788877777 455442211 125667777777777777
Q ss_pred cCC----CCceeeCCCCceEeeec
Q 019298 323 KLI----PELINFKSTGSSLKYLD 342 (343)
Q Consensus 323 ~~~----~g~~~~~~~~g~~~~~~ 342 (343)
+++ |.+.. .+..|+++|++
T Consensus 350 ~~l~~~~~~~~~-~~~~g~~~~i~ 372 (433)
T 1z7d_A 350 KRELKDSKIVRD-VRGKGLLCAIE 372 (433)
T ss_dssp HHHHTTCTTEEE-EEEETTEEEEE
T ss_pred HHHHHhCCCeEE-EEeeeeEEEEE
Confidence 643 32222 22346677765
No 164
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.93 E-value=1.3e-24 Score=198.53 Aligned_cols=239 Identities=15% Similarity=0.143 Sum_probs=178.9
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeC
Q 019298 53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPR 131 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~ 131 (343)
.++++.+++.+.+... .|.+..+..++|+.++++++ .+++++++|+++++..+++++ .++||+|+++.
T Consensus 14 ~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~ 82 (367)
T 3nyt_A 14 IKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGDEVITPG 82 (367)
T ss_dssp HHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred cCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECC
Confidence 4678888888877653 45566678999999999993 348999999999999999999 88999999999
Q ss_pred CCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 132 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
|+|..+...+...|.+++.++++++ ++.+|++++++++++++++|+ |+||||.. .++++|.++|+++|+++|+
T Consensus 83 ~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~---~~~~~i~~la~~~~~~li~ 155 (367)
T 3nyt_A 83 FTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQC---ADFDAINAIASKYGIPVIE 155 (367)
T ss_dssp SSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCC---CCHHHHHHHHHHTTCCBEE
T ss_pred CccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccCh---hhHHHHHHHHHHcCCEEEE
Confidence 9999999999999999999988653 478999999999987777766 88999987 4578888889999999999
Q ss_pred ccCCCcc-ccCCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-------
Q 019298 212 DEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI------- 281 (343)
Q Consensus 212 D~ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~------- 281 (343)
|++|+.. .+.+..... +. .+++.|| +|.++..|. .|++++++ +++.++++.....
T Consensus 156 D~a~~~g~~~~~~~~~~---~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~-------~~l~~~~~~~~~~g~~~~~~ 220 (367)
T 3nyt_A 156 DAAQSFGASYKGKRSCN---LS----TVACTSFFPSAPLGCYGD-GGAIFTND-------DELATAIRQIARHGQDRRYH 220 (367)
T ss_dssp ECTTTTTCEETTEETTS---SS----SEEEEECCTTSSSCCSSC-CEEEEESC-------HHHHHHHHHHTBTTEEETTE
T ss_pred ECccccCCeECCeeccC---CC----CEEEEECCCCCcCCCcCc-eeEEEeCC-------HHHHHHHHHHHhcCCCcCce
Confidence 9999853 333322211 22 3888897 899887676 88888853 4677777665331
Q ss_pred ------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298 282 ------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 282 ------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
....++...+++ ...+.. +-+..++.+++++.+.+.|.++ ++.
T Consensus 221 ~~~~g~~~~~~~~~aa~~-~~~l~~---~~~~~~~~~~~~~~~~~~L~~~-~~~ 269 (367)
T 3nyt_A 221 HIRVGVNSRLDTLQAAIL-LPKLEI---FEEEIALRQKVAAEYDLSLKQV-GIG 269 (367)
T ss_dssp ECSCCCBCCCCHHHHHHH-HHHHHT---HHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred eeccCcCCCccHHHHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHhccC-Cee
Confidence 234455555444 333322 2224555666667777777776 444
No 165
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.93 E-value=1.5e-25 Score=203.74 Aligned_cols=270 Identities=13% Similarity=0.074 Sum_probs=179.2
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSE---KFNGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 109 (343)
.+++++.|. .++++.+++++.+.+.+. ....|.. ..+..++.+.+.+++.+.+|.. ++++|++++|+
T Consensus 3 ~~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~ 75 (360)
T 1w23_A 3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQGG 75 (360)
T ss_dssp CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSH
T ss_pred ceEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCc
Confidence 356777775 367899999999887531 0111211 1222233344444444433432 35799999999
Q ss_pred -HHHHHHHHHHhcCC---CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHh-hhcCCceEEEEeCCCC
Q 019298 110 -TQAIDVAMALLSRP---GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVIINPGN 184 (343)
Q Consensus 110 -~~al~~~~~~l~~~---gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~~~~~~~~i~~~~p~n 184 (343)
++++..++..+..+ ||.|+++.++|..+ ..++..| +++.++++++++ .+|++++++ +++++++++++++|+|
T Consensus 76 gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~~~~n 152 (360)
T 1w23_A 76 ASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHITSNNT 152 (360)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEESEET
T ss_pred chHHHHHHHHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEeCCCC
Confidence 99999999998865 56677777666543 3456779 999998865333 378899988 8887899999999999
Q ss_pred CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCC
Q 019298 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264 (343)
Q Consensus 185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~ 264 (343)
|||.+++ ++ +++||+++|+|++|+.+.. +..+..+ .++++|+||.|+.+| +||+++++
T Consensus 153 ptG~~~~--~i------~~~~~~~li~D~a~~~~~~----~~~~~~~-----di~~~s~sK~~~~~G--~G~~~~~~--- 210 (360)
T 1w23_A 153 IYGTQYQ--NF------PEINHAPLIADMSSDILSR----PLKVNQF-----GMIYAGAQKNLGPSG--VTVVIVKK--- 210 (360)
T ss_dssp TTTEECS--SC------CCCCSSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTSCTT--CEEEEEEH---
T ss_pred Ccceecc--cc------cccCCceEEEechhhcCCC----CcCcccC-----CEEEEEcccccCCCC--cEEEEEcH---
Confidence 9999987 22 3389999999999987532 1122222 288999999998776 89999863
Q ss_pred CCCchHHHHHHhhhh-------------ccccCcchHHHHHHHhccchhhHH--HHH-HHHHHHHHHHHHHHhhcCCCCc
Q 019298 265 MFRKPKVVERMKKYF-------------DILGDPATFIQVCIMYGCLSTIMQ--IMI-HGNFLENFAGSCVPSYKLIPEL 328 (343)
Q Consensus 265 ~~~~~~~~~~l~~~~-------------~~~~~~~~~~~~a~~~~~l~~~~~--~l~-~~~~~~~~~~~~~~~L~~~~g~ 328 (343)
+++++++... .....++...+.++ ..++..... .++ .+++++++++.+.+.|++++++
T Consensus 211 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 284 (360)
T 1w23_A 211 -----DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYML-RNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGF 284 (360)
T ss_dssp -----HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTS
T ss_pred -----HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 4554443321 11134455555555 444443222 333 7888999999999999988665
Q ss_pred -eee-CC--CCceEeeecC
Q 019298 329 -INF-KS--TGSSLKYLDL 343 (343)
Q Consensus 329 -~~~-~~--~~g~~~~~~l 343 (343)
... .+ .+++++|+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~ 303 (360)
T 1w23_A 285 YVGHAEKGSRSLMNVTFNL 303 (360)
T ss_dssp SEESSCGGGBCSSEEEEEC
T ss_pred ccccCCchhccCcEEEEEc
Confidence 432 23 3466888764
No 166
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.93 E-value=8.8e-24 Score=193.12 Aligned_cols=244 Identities=16% Similarity=0.066 Sum_probs=180.6
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh---cCCCCeEE
Q 019298 52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---SRPGANIL 128 (343)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l---~~~gd~vl 128 (343)
++++.+.+++.+++... .|.+.....++|+.++++++ .+++++++|+++++..+++++ .++||+|+
T Consensus 10 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl 78 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFLG--------VKHALVFNSATSALLTLYRNFSEFSADRNEII 78 (375)
T ss_dssp CCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHSSCCCTTSCEEE
T ss_pred CCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcccCCCCCEEE
Confidence 46789999999988653 23344567899999999993 239999999999999999999 88999999
Q ss_pred EeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcE
Q 019298 129 LPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (343)
Q Consensus 129 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 208 (343)
++.|+|..+...+...|.+++.++++++ ..+|++++++.++++++++++++| ||.+.+ +++|.++|+++|++
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~ 150 (375)
T 2fnu_A 79 TTPISFVATANMLLESGYTPVFAGIKND--GNIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSLS 150 (375)
T ss_dssp ECSSSCTHHHHHHHHTTCEEEECCBCTT--SSBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTCE
T ss_pred ECCCccHhHHHHHHHCCCEEEEeccCCC--CCCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCCE
Confidence 9999999999999999999999988653 368999999998888888887776 999965 67888889999999
Q ss_pred EEEccCCCccccCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccc----
Q 019298 209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL---- 282 (343)
Q Consensus 209 ~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~---- 282 (343)
+|+|++|+.+..... .. +...+ .+++.|+| |.++. | +|++++.+ +++++++++......
T Consensus 151 li~D~a~~~~~~~~~--~~---~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~------~~~~~~~~~~~~~~~~~~~ 215 (375)
T 2fnu_A 151 FLSDSSHALGSEYQN--KK---VGGFA-LASVFSFHAIKPITT-A--EGGAVVTN------DSELHEKMKLFRSHGMLKK 215 (375)
T ss_dssp EEEECTTCTTCEETT--EE---TTSSS-SEEEEECCTTSSSCC-S--SCEEEEES------CHHHHHHHHHHTBTTEEES
T ss_pred EEEECccccCCeECC--ee---ccccC-CeEEEeCCCCCCccc-c--CceEEEeC------CHHHHHHHHHHHhcCCccc
Confidence 999999987542211 11 12111 37888888 99865 6 78887742 245777776553211
Q ss_pred -------------cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 283 -------------GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 283 -------------~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
...++...++. ...+ ..+-+..++++++++.+.+.|+++||+.+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~a~~-~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 275 (375)
T 2fnu_A 216 DFFEGEVKSIGHNFRLNEIQSALG-LSQL---KKAPFLMQKREEAALTYDRIFKDNPYFTPLHP 275 (375)
T ss_dssp SSSCEEESSCCCBCCCCHHHHHHH-HHHH---TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGG
T ss_pred cccccccccccccCCCCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhhcCCCccccCC
Confidence 12233333222 1111 22233778888899999999999888886444
No 167
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.93 E-value=1.2e-24 Score=202.53 Aligned_cols=277 Identities=15% Similarity=0.075 Sum_probs=182.2
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al 113 (343)
++.++||+.|......++ .+|.+.+++.++++......| ..++++.+++.+.+.++ .+++|++++|+++++
T Consensus 51 g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea~ 121 (424)
T 2e7u_A 51 GNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGLTFGA-----PSPLEVALAKKVKRAYP---FVDLVRFVNSGTEAT 121 (424)
T ss_dssp CCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHCT---TCCEEEEESSHHHHH
T ss_pred CCEEEEccccccccccCC-CCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHH
Confidence 677899998874422223 689999999999876422223 34566666666665543 578999999999999
Q ss_pred HHHHHH---hcCCCCeEEEeCCCCcchHHHHHh--------------cCc------eeEEeecCCCCCCCCCHHHHHhhh
Q 019298 114 DVAMAL---LSRPGANILLPRPGFPIYELSAAF--------------RHI------EVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 114 ~~~~~~---l~~~gd~vl~~~p~~~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
..+++. +.+ ++.|++.+|+|+++...+.. .|. ++..++. .|+++|++.+
T Consensus 122 ~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l 193 (424)
T 2e7u_A 122 MSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVL 193 (424)
T ss_dssp HHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHH
T ss_pred HHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHH
Confidence 999986 554 47899999999876543221 121 1222321 3789999888
Q ss_pred cC--CceEEEEeCCCCC-ccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc
Q 019298 171 DQ--NTVALVIINPGNP-CGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR 246 (343)
Q Consensus 171 ~~--~~~~i~~~~p~np-tG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 246 (343)
++ +..++++++|+|+ ||.+. +.+.+++|.++ ++||+++|+||+|.++ ..+.. .....++...++ .||||+
T Consensus 194 ~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~sK~ 267 (424)
T 2e7u_A 194 KRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPDL---VTLGKI 267 (424)
T ss_dssp HHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCSE---EEECGG
T ss_pred HhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcch---hhhhhh
Confidence 63 3456677788654 89765 79999999999 9999999999999987 33321 111112222232 389999
Q ss_pred cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhh
Q 019298 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSY 322 (343)
Q Consensus 247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L 322 (343)
|+. |+|+||+++++ ++++.++.. ...+++.++++++++ .++|+...+.-+..++++++++.+.+.|
T Consensus 268 l~~-G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~~~~~~~~~~~~~~~l~~~L 337 (424)
T 2e7u_A 268 LGG-GLPAAAYAGRR--------EIMEKVAPLGPVYQAGTLSGNPLAMAAG-LATLELLEENPGYYAYLEDLGARLEAGL 337 (424)
T ss_dssp GGT-TSSCEEEEECH--------HHHTTBTTTSSBCCCCTTCSCHHHHHHH-HHHHHHHHHCTHHHHHHHHHHHHHHHHH
T ss_pred hhC-CcceEEEEEcH--------HHHhhhcccCCcccCCCCCCCHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 985 99999999853 677766542 122456788888777 5555432221225667777777777777
Q ss_pred cCC---CCceeeCCCCceEeeecC
Q 019298 323 KLI---PELINFKSTGSSLKYLDL 343 (343)
Q Consensus 323 ~~~---~g~~~~~~~~g~~~~~~l 343 (343)
+++ .++....+..|.|+|+++
T Consensus 338 ~~~~~~~~~~~~~~~~g~~~~i~~ 361 (424)
T 2e7u_A 338 KEVLKEKGLPHTVNRVGSMITVFF 361 (424)
T ss_dssp HHHHHHTTCCCEEEEETTEEEEES
T ss_pred HHHHHhCCCceEEEeeceEEEEEE
Confidence 653 133321233466788764
No 168
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.92 E-value=6.2e-24 Score=197.22 Aligned_cols=228 Identities=14% Similarity=0.048 Sum_probs=163.4
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~ 152 (343)
+...+|++.++++++ .+..++++++++++..++++++++||+|++++|+|..+.. .+...|.+++.++
T Consensus 82 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~ 153 (430)
T 3ri6_A 82 PTVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVD 153 (430)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence 456789999999883 3456677777899999999999999999999999988777 5677899998887
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
.+ |++++++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+...+.. + .
T Consensus 154 ~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~~----~-~--- 215 (430)
T 3ri6_A 154 VM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLLE----A-K--- 215 (430)
T ss_dssp TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTCC----G-G---
T ss_pred CC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC----h-H---
Confidence 53 799999999989999999999999999975 6788888999999999999998644311 1 1
Q ss_pred CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC----c---------hHHHHHHhhh--hccccCcchHHHHHHHhcc
Q 019298 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR----K---------PKVVERMKKY--FDILGDPATFIQVCIMYGC 297 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~----~---------~~~~~~l~~~--~~~~~~~~~~~~~a~~~~~ 297 (343)
..+..+++.|+||.++.+|..+|.+++.+....+. . ..++.+++.. .......++.....+
T Consensus 216 ~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~---- 291 (430)
T 3ri6_A 216 RLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQ---- 291 (430)
T ss_dssp GGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHH----
T ss_pred HcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHH----
Confidence 11234999999999998887777766633221110 0 1223333322 122233444443333
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCCC
Q 019298 298 LSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKST 334 (343)
Q Consensus 298 l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~ 334 (343)
+.....+..+.++..++...+.+.|+++|++. +..|.
T Consensus 292 l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~ 329 (430)
T 3ri6_A 292 SLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPS 329 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTT
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCC
Confidence 11112222366777888999999999998887 66665
No 169
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.92 E-value=1.1e-23 Score=193.81 Aligned_cols=212 Identities=14% Similarity=0.073 Sum_probs=158.8
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~ 152 (343)
....++++.++++++ .+++++++++++++..+++++.++||+|+++.|+|+++... ++..|.+++.++
T Consensus 59 ~~~~~l~~~la~~~g--------~~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 130 (389)
T 3acz_A 59 PTVEQFEEMVCSIEG--------AAGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLID 130 (389)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence 345689999999983 23677777788999999999899999999999999986655 577899998886
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
. .|+++++++++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|..+.+.. ++.
T Consensus 131 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~----~~~--- 193 (389)
T 3acz_A 131 T-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLK----PLE--- 193 (389)
T ss_dssp T-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC----GGG---
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccC----ccc---
Confidence 5 3799999999888999999999999999976 7888889999999999999999765321 121
Q ss_pred CCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298 233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNF 310 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~ 310 (343)
.+.+++++|+||.++++|.|+ ||+++++ ++++++++.... .....++..+.++ ...|.. +....++
T Consensus 194 -~~~di~~~S~sK~~~~~~~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~-~~~l~~---l~~r~~~ 261 (389)
T 3acz_A 194 -LGADIALHSVSKYINGHGDVIGGVSSAKT-------AEDIATIKFYRKDAGSLMAPMDAFLC-ARGMKT---LPIRMQI 261 (389)
T ss_dssp -TTCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHTT---HHHHHHH
T ss_pred -cCCeEEEECChhhccCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHH-HcCccH---HHHHHHH
Confidence 235699999999999999998 9998852 257777776543 2344566665555 333332 1123344
Q ss_pred HHHHHHHHHHhhcCC
Q 019298 311 LENFAGSCVPSYKLI 325 (343)
Q Consensus 311 ~~~~~~~~~~~L~~~ 325 (343)
..++...+.+.|+++
T Consensus 262 ~~~~~~~l~~~l~~~ 276 (389)
T 3acz_A 262 HMENGLKVAKFLEQH 276 (389)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcC
Confidence 455555555555544
No 170
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=1.3e-23 Score=193.19 Aligned_cols=216 Identities=17% Similarity=0.189 Sum_probs=163.2
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~ 152 (343)
.+..++++.+++++. .+ +.|++++| ++++..+++.+.++||+|+++.|+|.+.... ++..|.++..++
T Consensus 52 ~~~~~l~~~la~~~~------~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 123 (386)
T 1cs1_A 52 PTRDVVQRALAELEG------GA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD 123 (386)
T ss_dssp HHHHHHHHHHHHHHT------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC
T ss_pred ccHHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeC
Confidence 456899999999994 22 56666555 9999999999999999999999999874443 466788888876
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
.. |++++++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|..+.+.. +.
T Consensus 124 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~---- 185 (386)
T 1cs1_A 124 QG-------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN----PL---- 185 (386)
T ss_dssp TT-------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG----
T ss_pred CC-------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----cc----
Confidence 52 789999999888999999999999999975 7888888999999999999999876431 11
Q ss_pred CCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298 233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNF 310 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~ 310 (343)
..+.++++.|+||.|+++|.|+ ||+++++ ++++++++..... ....++..+.++ ...+. .+.+..+.
T Consensus 186 ~~~~di~~~s~sK~~~~~~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~l~---~~~~~~~~ 254 (386)
T 1cs1_A 186 ALGADLVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLL-LRGLR---TLVPRMEL 254 (386)
T ss_dssp GGTCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHTCBCCHHHHHHH-HHHHT---THHHHHHH
T ss_pred ccCceEEEEcCcccccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hhccc---HHHHHHHH
Confidence 1245699999999999999997 9999853 3577777765432 334566666655 22222 12225666
Q ss_pred HHHHHHHHHHhhcCCCCce
Q 019298 311 LENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 311 ~~~~~~~~~~~L~~~~g~~ 329 (343)
+.++++.+.+.|++++++.
T Consensus 255 ~~~~~~~l~~~l~~~~~l~ 273 (386)
T 1cs1_A 255 AQRNAQAIVKYLQTQPLVK 273 (386)
T ss_dssp HHHHHHHHHHHHTTCTTEE
T ss_pred HHHHHHHHHHHHhcCCCeE
Confidence 7777888888877765543
No 171
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.92 E-value=1.6e-24 Score=203.23 Aligned_cols=288 Identities=12% Similarity=0.010 Sum_probs=184.4
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++.++||+.+... ..++ .+|.+.+++.+++... ..|....+..+.+.++++.+.+..+. ...++|++++|++++
T Consensus 60 g~~ylD~~~~~~~--~~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGseA 134 (451)
T 3oks_A 60 GNRLIDLGSGIAV--TTVGNSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSALFNSGSEA 134 (451)
T ss_dssp SCEEEESSHHHHT--CTTCTTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEEESSHHHH
T ss_pred CCEEEEcCCCccc--cccCCCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEEeCcHHHH
Confidence 6778999988543 2244 5899999999998754 23554445667777888877765442 135799999999999
Q ss_pred HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCc--------------eeEEeecCCC--------CCCC---CCHHH
Q 019298 113 IDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPD--------KGWE---VDLDD 165 (343)
Q Consensus 113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~--------~~~~---~d~~~ 165 (343)
+..+++.+.. .+++|++.+++|+++...+...+. .+..++.... +... .+++.
T Consensus 135 ~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 214 (451)
T 3oks_A 135 VENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKR 214 (451)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHH
Confidence 9999988753 458999999999887665544422 3344443210 0000 12344
Q ss_pred HHhhh----cCCceEEEEeCCCCCcc-c-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298 166 IESLA----DQNTVALVIINPGNPCG-N-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (343)
Q Consensus 166 l~~~~----~~~~~~i~~~~p~nptG-~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 239 (343)
+++.+ ..+..+++++.|.|++| . ..+.+.+++|.++|++||+++|+||+|.++.+.+.. .....++...+++
T Consensus 215 ~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pdi~- 292 (451)
T 3oks_A 215 AITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAM-FACEHEGIDPDLI- 292 (451)
T ss_dssp HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE-
T ss_pred HHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccc-hhhhhcCCCCCee-
Confidence 43433 33566777888866555 3 356778999999999999999999999987655432 2222222222333
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSC 318 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~ 318 (343)
||||+++. |+|+||++++ +++++.+.... ..+++.++++++++ .++|+.... -+..++++++.+.+
T Consensus 293 --t~sK~l~~-G~~iG~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~-~~~~~~~~~~~~~l 359 (451)
T 3oks_A 293 --VTAKGIAG-GLPLSAVTGR--------AEIMDSPHVSGLGGTYGGNPIACAAA-LATIETIES-EGLVARAQQIEKIM 359 (451)
T ss_dssp --EECGGGGT-TSSCEEEEEE--------HHHHTCSCTTSBCCSSSSCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHH
T ss_pred --eehhhhhC-CcceEEEEEC--------HHHHhhhcCCCcCCCCCCCHHHHHHH-HHHHHHHhh-hhHHHHHHHHHHHH
Confidence 88999876 9999999985 36777666543 33667889988888 555542111 01444455555555
Q ss_pred HHhhc----CCCCceeeCCCCceEeeec
Q 019298 319 VPSYK----LIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 319 ~~~L~----~~~g~~~~~~~~g~~~~~~ 342 (343)
.+.|+ .+|.+....+ .|.|+|++
T Consensus 360 ~~~L~~~~~~~~~~~~~~~-~G~~~~~~ 386 (451)
T 3oks_A 360 KDRLGRLQAEDDRIGDVRG-RGAMIAME 386 (451)
T ss_dssp HHHHHHHHHHCTTEEEEEE-ETTEEEEE
T ss_pred HHHHHHHHhhCCCeEEEEE-eeEEEEEE
Confidence 44443 4554443233 35566654
No 172
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.92 E-value=2.8e-24 Score=199.26 Aligned_cols=268 Identities=13% Similarity=0.048 Sum_probs=181.8
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-----C---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-----P---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-----~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~ 106 (343)
++.+.|+.+.+ .+.++.+.+++.+++... ...+. + .....++++.+++++ ++++++|++|
T Consensus 27 ~~~~yld~~~~-----~~~~~~v~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~ 94 (416)
T 1qz9_A 27 EGVIYLDGNSL-----GARPVAALARAQAVIAEE-WGNGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVT 94 (416)
T ss_dssp TTCEECCTTTS-----CCCBTTHHHHHHHHHHTC-CCCCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEEC
T ss_pred CCeEeecCCCc-----CCCcHHHHHHHHHHHHHH-HhccCccccchhhHHHHHHHHHHHHHHHc------CCCcccEEEe
Confidence 45788888763 256788899999988642 11111 0 123356667776665 3467899999
Q ss_pred cChHHHHHHHHHHhc------CCCCe-EEEeCCCCcchHHH----HHhc--CceeEEeecCCCCCCCCCHHHHHhhhcCC
Q 019298 107 SGCTQAIDVAMALLS------RPGAN-ILLPRPGFPIYELS----AAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQN 173 (343)
Q Consensus 107 ~g~~~al~~~~~~l~------~~gd~-vl~~~p~~~~~~~~----~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 173 (343)
+|+++++..+++++. ++||+ |++..++|+.+... ++.. |.+++.++. +++|+++++++
T Consensus 95 ~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~ 165 (416)
T 1qz9_A 95 DTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQD 165 (416)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTT
T ss_pred CChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCC
Confidence 999999998888876 88986 55555677754433 2333 888887754 68888888888
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCc
Q 019298 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (343)
Q Consensus 174 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r 253 (343)
++++++++|+||||.+++ +++|.++|+++|+++|+|++|+... ....+..+ +..+++.|++|.+ .+|.+
T Consensus 166 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~---~~d~~~~s~~K~l-~~g~~ 234 (416)
T 1qz9_A 166 TAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGA----VPVDLHQA---GADYAIGCTYKYL-NGGPG 234 (416)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT----SCCCHHHH---TCSEEEECSSSTT-CCCTT
T ss_pred ceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccccC----cCCChhhc---CCCEEEecCcccC-CCCCC
Confidence 899999999999999987 6888889999999999999998421 11122222 2348899999995 45777
Q ss_pred E-EEEEEeCCCCCCCchHHHHHHhhh-----------------------hcc-ccCcchHHHHHHHhccchhhH-HHH-H
Q 019298 254 L-GWFVTTDPCGMFRKPKVVERMKKY-----------------------FDI-LGDPATFIQVCIMYGCLSTIM-QIM-I 306 (343)
Q Consensus 254 ~-G~i~~~~~~~~~~~~~~~~~l~~~-----------------------~~~-~~~~~~~~~~a~~~~~l~~~~-~~l-~ 306 (343)
+ |+++++++ ++++++.. ... .+.++...+.++ .+++.... +.+ +
T Consensus 235 ~~g~l~~~~~--------~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~ 305 (416)
T 1qz9_A 235 SQAFVWVSPQ--------LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMV-ECGLDVFAQTDMAS 305 (416)
T ss_dssp CCCEEEECTT--------TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHH-HHHHHHHTTSCHHH
T ss_pred CeEEEEECHH--------HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHH-HHHHHHHHhcCHHH
Confidence 7 99998653 22222221 011 234555555554 44443321 223 3
Q ss_pred HHHHHHHHHHHHHHhhcCC-C--CceeeCCC----CceEeeecC
Q 019298 307 HGNFLENFAGSCVPSYKLI-P--ELINFKST----GSSLKYLDL 343 (343)
Q Consensus 307 ~~~~~~~~~~~~~~~L~~~-~--g~~~~~~~----~g~~~~~~l 343 (343)
.+++++++++.+.+.|+++ | |+.+..+. .+.++|+++
T Consensus 306 ~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 349 (416)
T 1qz9_A 306 LRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEH 349 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEec
Confidence 7888899999999999875 6 78866664 356677753
No 173
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.92 E-value=1.3e-24 Score=202.71 Aligned_cols=265 Identities=17% Similarity=0.084 Sum_probs=176.8
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||+.+... +.++ .+|.+.+++.+++.......|+ .....+|++.+++++ + .+++|++++|+++
T Consensus 51 ~g~~ylD~~~~~~~--~~lG~~~p~v~~A~~~~~~~~~~~~~~-~~~~~~l~~~la~~~------~-~~~~v~~~~~Gse 120 (429)
T 3k28_A 51 DGNEYIDYVLSWGP--LIHGHANDRVVEALKAVAERGTSFGAP-TEIENKLAKLVIERV------P-SIEIVRMVNSGTE 120 (429)
T ss_dssp TCCEEEESCGGGTT--CTTCBSCHHHHHHHHHHHHHCSCCSSC-CHHHHHHHHHHHHHS------T-TCSEEEEESSHHH
T ss_pred CCCEEEECCCChhh--cccCCCCHHHHHHHHHHHhhCcCcCCC-CHHHHHHHHHHHHhC------C-CCCEEEEeCChHH
Confidence 37889999988754 2345 6899999999998765433344 345667888888776 2 5789999999999
Q ss_pred HHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-CceeEEeecCCCCCCC------------CCHHHHHhhhcC--Cc
Q 019298 112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HIEVRHFDLLPDKGWE------------VDLDDIESLADQ--NT 174 (343)
Q Consensus 112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~--~~ 174 (343)
++..+++.+.. ++++|++.+|+|+.+...+... |.....+......+.. -|+++|++.++. +.
T Consensus 121 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 200 (429)
T 3k28_A 121 ATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDD 200 (429)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCC
Confidence 99999988754 5689999999997655433222 2222111111111100 178999988863 33
Q ss_pred eEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298 175 VALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (343)
Q Consensus 175 ~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 252 (343)
.++++++| +|++|.+. +.+.+++|.++|++||+++|+||+|.++ ..+.. .....++...+ +.|+||+|+. |+
T Consensus 201 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~~~-G~ 274 (429)
T 3k28_A 201 IACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYN-CGQGYYGVTPD---LTCLGKVIGG-GL 274 (429)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTT-HHHHHHTCCCS---EEEECGGGGT-TS
T ss_pred EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hHHHHhCCCCc---eehhhhhhcC-CC
Confidence 45555666 55666654 6788999999999999999999999987 44321 11111222222 3478999974 99
Q ss_pred cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298 253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~ 324 (343)
|+||++++ +++++.+... ...+++.++++++++ .++|+... -+.+++++++++.+.+.|++
T Consensus 275 ~iG~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~a~aaa-~aal~~~~--~~~~~~~~~~~~~l~~~L~~ 339 (429)
T 3k28_A 275 PVGAYGGK--------AEIMRQVAPSGPIYQAGTLSGNPLAMAAG-YETLVQLT--PESYVEFERKAEMLEAGLRK 339 (429)
T ss_dssp CCEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHH-HHHHHTCC--HHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEc--------HHHHhhhccCCCccccCCCCCChHHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 99999985 3677766542 223567788888888 66665432 23666677777777766654
No 174
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.92 E-value=1.4e-23 Score=193.54 Aligned_cols=240 Identities=12% Similarity=0.144 Sum_probs=175.4
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCC--CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEE
Q 019298 53 TTHVATEAVAEALLSEKFNGYAPTAG--LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILL 129 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g--~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~ 129 (343)
.++++.+++.+++.. .|.++.| ..++|++++++++ .+++++++|+++++..+++++ .++||+|++
T Consensus 10 ~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~ 77 (394)
T 1o69_A 10 MGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLA 77 (394)
T ss_dssp --CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEE
Confidence 346777888887764 3655567 8899999999993 379999999999999999999 899999999
Q ss_pred eCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (343)
Q Consensus 130 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 206 (343)
+.|+|..+...+...|.+++.++++ +++.+|++++++.+++ +++++++++ |||.. .++++|.++|+++|
T Consensus 78 ~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~---~~l~~i~~l~~~~~ 149 (394)
T 1o69_A 78 SSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNA---AKMDEIVEICKEND 149 (394)
T ss_dssp ESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCC---CCHHHHHHHHHHTT
T ss_pred CCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCCh---hhHHHHHHHHHHcC
Confidence 9999999999999999999999876 4577999999998876 688888875 89976 67888899999999
Q ss_pred cEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcccc-C
Q 019298 207 TLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-D 284 (343)
Q Consensus 207 ~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~ 284 (343)
+++|+|++|. ++.+.+..... +. + +.+.|+||..+++|.|+||+++++ ++++++++....... .
T Consensus 150 ~~li~Dea~~~g~~~~~~~~~~---~~--~--~~~~s~s~~K~l~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~ 215 (394)
T 1o69_A 150 IVLIEDAAEALGSFYKNKALGT---FG--E--FGVYSYNGNKIITTSGGGMLIGKN-------KEKIEKARFYSTQAREN 215 (394)
T ss_dssp CEEEEECTTCTTCEETTEETTS---SS--S--EEEEECCTTSSSCCSSCEEEEESC-------HHHHHHHHHHTBTCCCS
T ss_pred CEEEEECcCcccceeCCccccc---cc--C--cEEEEEeCCccCCCCCceEEEECC-------HHHHHHHHHHHHhcccc
Confidence 9999999999 55544332111 11 1 455666544456678999999853 467777776532110 0
Q ss_pred --------------cchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298 285 --------------PATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK 332 (343)
Q Consensus 285 --------------~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~ 332 (343)
.++....++ ...+ ..+.+.+++++++++.+.+.|.++ +.+..
T Consensus 216 ~~~~~~~~~g~~~~~~~~~aa~~-l~~l---~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~ 271 (394)
T 1o69_A 216 CLHYEHLDYGYNYRLSNVLGAIG-VAQM---EVLEQRVLKKREIYEWYKEFLGEY--FSFLD 271 (394)
T ss_dssp SSSCCCSSCCCBCBCCHHHHHHH-HHHH---TTHHHHHHHHHHHHHHHHHHHTTT--EECCC
T ss_pred CccccccccCcccCcCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhccc--ccccC
Confidence 122222222 1111 223337788888899999998876 55433
No 175
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.92 E-value=9.7e-24 Score=197.99 Aligned_cols=298 Identities=11% Similarity=-0.005 Sum_probs=200.6
Q ss_pred cCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 019298 11 TGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90 (343)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~ 90 (343)
|........+...+.+.... ++....++.... + .+.++.+.+++.+++.... .+|...++..++++.+.+++
T Consensus 19 p~~g~~~~~v~~~~~~~~~~--~~~~~~~~~~f~----~-~~~~~~v~e~~~~a~~~~~-~~~~~~~~~~~l~~~~~~~l 90 (452)
T 2dgk_A 19 PLHEMRDDVAFQIINDELYL--DGNARQNLATFC----Q-TWDDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMV 90 (452)
T ss_dssp CCSCCCHHHHHHHHHHHGGG--SCCCTTBCSCCS----C-CCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhcC--CCCCccCCCCee----C-CCchHHHHHHHHHHhccCC-CChhhChhHHHHHHHHHHHH
Confidence 33344556666666554421 122222332222 1 3455788898888876432 34555567788899998888
Q ss_pred hhhCCCCCCC---CcEEEecChHHHHHHHHHHhcC--------CC-----CeEEEeCCCCcchHHHHHhcCceeEEeecC
Q 019298 91 SRDLPYKLTP---NDVFVTSGCTQAIDVAMALLSR--------PG-----ANILLPRPGFPIYELSAAFRHIEVRHFDLL 154 (343)
Q Consensus 91 ~~~~~~~~~~---~~i~~~~g~~~al~~~~~~l~~--------~g-----d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 154 (343)
.+.+|.+.+. ..+++|+|+++++..++.++.. +| ++|++++ +|..+...+...|++++.++++
T Consensus 91 a~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~ 169 (452)
T 2dgk_A 91 ADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMR 169 (452)
T ss_dssp HHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCB
T ss_pred HHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecC
Confidence 8877754332 2489999999999999888753 45 5899999 9999999999999999999886
Q ss_pred CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc------CcEEEEccCCCcccc---CCCCC
Q 019298 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL------KTLVIADEVYGHLVF---GDKPF 225 (343)
Q Consensus 155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~------~~~~i~D~ay~~~~~---~~~~~ 225 (343)
+ +++.+|+++|++++++++++|++++|+||||.+ +++++|+++|+++ ++++++|++|+.+.. .+...
T Consensus 170 ~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~---~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~ 245 (452)
T 2dgk_A 170 P-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNY---EFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV 245 (452)
T ss_dssp T-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBB---CCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC
T ss_pred C-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCccc---CCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccch
Confidence 4 367899999999998889999999999999999 5677888888885 999999999998753 22111
Q ss_pred CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc----------ccCc---chHHHHH
Q 019298 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI----------LGDP---ATFIQVC 292 (343)
Q Consensus 226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~---~~~~~~a 292 (343)
.. +...+-..++.|++| |++.|.++||+++.++.. +.+.+...... ..+. ....+.+
T Consensus 246 ~~---~~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~a 315 (452)
T 2dgk_A 246 WD---FRLPRVKSISASGHK-FGLAPLGCGWVIWRDEEA------LPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYY 315 (452)
T ss_dssp CS---TTSTTEEEEEEETTT-TTCCCSSCEEEEESSGGG------SCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHH
T ss_pred hh---cCCCCCcEEEECccc-ccCCCCCeEEEEEcCHHH------HHHHhccCccccCCCCCCcccCCCChhHHHHHHHH
Confidence 11 111122367788999 578899999999965321 11222111000 0111 2233333
Q ss_pred HHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 293 IMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 293 ~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
+ ...+.. ..+.+..++..++++++.+.|++++++++..|
T Consensus 316 a-l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 354 (452)
T 2dgk_A 316 E-FLRLGR-EGYTKVQNASYQVAAYLADEIAKLGPYEFICT 354 (452)
T ss_dssp H-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred H-HHHHhH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEEecC
Confidence 3 222211 23334788889999999999999988886543
No 176
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.92 E-value=6.1e-24 Score=199.17 Aligned_cols=287 Identities=14% Similarity=0.058 Sum_probs=175.7
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
+++.++||+.+......++ .+|.+.+++.+++... ..|....+..+.++++++++.+..+ ...++|++++|++++
T Consensus 42 ~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA 116 (448)
T 3dod_A 42 NGKEYYDGFSSVWLNVHGH-RKKELDDAIKKQLGKI--AHSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEA 116 (448)
T ss_dssp TSCEEEETTHHHHTCSSCB-SCHHHHHHHHHHHTTC--SCCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence 3778899998864322222 5899999999998754 2233344556777888888876553 345899999999999
Q ss_pred HHHHHHHhcC----CC----CeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCCCCC----------
Q 019298 113 IDVAMALLSR----PG----ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEV---------- 161 (343)
Q Consensus 113 l~~~~~~l~~----~g----d~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~---------- 161 (343)
+..+++.+.. +| |+|++.+|+|+++...+...+. .+..++. .+.+..
T Consensus 117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 194 (448)
T 3dod_A 117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDECRD 194 (448)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhhhhH
Confidence 9999998865 44 9999999999876654443322 1222222 122222
Q ss_pred -CHHHHHhhhc---CCceEEEEeCCC-CCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298 162 -DLDDIESLAD---QNTVALVIINPG-NPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (343)
Q Consensus 162 -d~~~l~~~~~---~~~~~i~~~~p~-nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~ 235 (343)
|+++|++.++ +++.++++..++ |++|. .++.+.+++|.++|++||+++|+||+|.++.+.+... ....++...
T Consensus 195 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~~ 273 (448)
T 3dod_A 195 QCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQP 273 (448)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCC
T ss_pred HHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCCC
Confidence 4788988886 234444444445 88885 4677889999999999999999999999876655422 222222222
Q ss_pred CEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh-------hh-ccccCcchHHHHHHHhccchhh--HHH
Q 019298 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-------YF-DILGDPATFIQVCIMYGCLSTI--MQI 304 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~-------~~-~~~~~~~~~~~~a~~~~~l~~~--~~~ 304 (343)
+ +.+|||+++. | +|+||++++ +++++.+.. .. ..+++.++++++++ .++|+.. .++
T Consensus 274 d---i~t~sK~l~~-G~~~ig~v~~~--------~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~~~~ 340 (448)
T 3dod_A 274 D---LMAAGKGITG-GYLPIAVTFAT--------EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVA-LENLALFESENI 340 (448)
T ss_dssp S---EEEECGGGGT-TSSCCEEEEEE--------HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHH-HHHHHHHHHTTH
T ss_pred C---EEEecccccC-CcCceEEEEEC--------HHHHHHhhhccccCCcccccCCCCcCHHHHHHH-HHHHHHHhcccH
Confidence 2 3368999865 8 599999985 478887765 32 23567788888887 5555421 122
Q ss_pred HH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 305 MI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 305 l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
++ .++..+..++.+.+ +..+|.+....+ .|.++|++
T Consensus 341 ~~~~~~~~~~~~~~l~~-l~~~~~~~~~~~-~g~~~~~~ 377 (448)
T 3dod_A 341 VEQVAEKSKKLHFLLQD-LHALPHVGDIRQ-LGFMCGAE 377 (448)
T ss_dssp HHHHHHHHHHHHHHHHH-HTTSTTEEEEEE-ETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHH-HhcCCCeEEEEe-eeEEEEEE
Confidence 22 33333334444444 445544433223 35566654
No 177
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.92 E-value=3.1e-24 Score=202.08 Aligned_cols=264 Identities=15% Similarity=0.125 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC-----C----C
Q 019298 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP-----G----A 125 (343)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~-----g----d 125 (343)
+.+.+++.+++..+. ..|.+..+..+|++++++++. .+++++|+|+++++..+++++.++ | |
T Consensus 53 ~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d 123 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSK 123 (467)
T ss_dssp SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTT
T ss_pred HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccc
Confidence 777788888775433 368777788999999999992 479999999999999999999887 8 9
Q ss_pred eEEEeCCCCcchHHHHHhcCceeEEeec----CCC----CCCCCCHHHHHhhhcC----CceEEEEeCCCCCc-ccccCH
Q 019298 126 NILLPRPGFPIYELSAAFRHIEVRHFDL----LPD----KGWEVDLDDIESLADQ----NTVALVIINPGNPC-GNVYSY 192 (343)
Q Consensus 126 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~----~~~----~~~~~d~~~l~~~~~~----~~~~i~~~~p~npt-G~~~~~ 192 (343)
+|++..+.|..+.......|........ ... .++.+|+++|++++++ ++++|++++|+||+ |.+++.
T Consensus 124 ~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~ 203 (467)
T 2oqx_A 124 MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSL 203 (467)
T ss_dssp CEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCH
T ss_pred eEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCH
Confidence 9887744444444455556665543311 111 2356899999999873 68899999999998 999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCc----------cccCCCCCCcccc--cCCCCCEEEEccCccccCCC-CCcEEEEEE
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGH----------LVFGDKPFVPMGV--FGSTVPILTLGSLSKRWIVP-GWRLGWFVT 259 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~----------~~~~~~~~~~~~~--~~~~~~~i~~~S~sK~~~~~-G~r~G~i~~ 259 (343)
+++++|+++|++||+++|+|+++.. ..+.+.....+.. .... . +++.|+||.++++ | ||+++
T Consensus 204 ~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~-d-~~~~s~sK~~g~~~G---g~~~~ 278 (467)
T 2oqx_A 204 ANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYA-D-MLAMSAKKDAMVPMG---GLLCM 278 (467)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGC-S-EEEEESSSTTCCSSC---EEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccC-C-eEEEecccccCCCCc---eEEEe
Confidence 9999999999999999999966543 1222322111110 0111 2 4578999998876 4 77777
Q ss_pred eCCCCCCCchHHHHHHhhhh--c-c---ccCcchHHHHHHHhccchhhHHHH--HHHHHHHHHHHHHHHhhcCCCCceee
Q 019298 260 TDPCGMFRKPKVVERMKKYF--D-I---LGDPATFIQVCIMYGCLSTIMQIM--IHGNFLENFAGSCVPSYKLIPELINF 331 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~~--~-~---~~~~~~~~~~a~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~L~~~~g~~~~ 331 (343)
+++. + -+...+++... . . ....+.....++ ...+ ..++ +..++..++++.+.+.|+++ |+.+.
T Consensus 279 ~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al-~~~l---~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~ 349 (467)
T 2oqx_A 279 KDDS-F---FDVYTECRTLCVVQEGFPTYGGLEGGAMERL-AVGL---YDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ 349 (467)
T ss_dssp CSGG-G---HHHHHHHHHHHHHTTSSCCCCCCCHHHHHHH-HHHH---HHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE
T ss_pred cChh-H---HHHHHHHHHhhhccCCcccccchhhhHHHHH-HHhh---HhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee
Confidence 5410 0 02334444321 1 0 111122222222 1111 1222 14455567888888999888 78876
Q ss_pred CCCCceEeeec
Q 019298 332 KSTGSSLKYLD 342 (343)
Q Consensus 332 ~~~~g~~~~~~ 342 (343)
|.+++++|++
T Consensus 350 -~~~~~~~~~~ 359 (467)
T 2oqx_A 350 -QAGGHAAFVD 359 (467)
T ss_dssp -EECSSCEEEE
T ss_pred -cCCceEEEEe
Confidence 8889999975
No 178
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.92 E-value=2.9e-23 Score=191.26 Aligned_cols=242 Identities=17% Similarity=0.126 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHhc------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE---ecChHHHHHHHHHHhcCCCC
Q 019298 55 HVATEAVAEALLS------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA 125 (343)
Q Consensus 55 ~~~~~~~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~al~~~~~~l~~~gd 125 (343)
..+++++.++... ...+.|+. .+...|++.+|++++ .+..++ ++|+++++..++.+++++||
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~~GD 102 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLERVYATVFK--------TEAALVRPQIISGTHAISTVLFGILRPDD 102 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHHHHHHHHhC--------CCcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence 5566777665321 12234555 356889999999983 355555 88999999999999999999
Q ss_pred eEEEeC-CCCcchHHH----------HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeC----CCCCccccc
Q 019298 126 NILLPR-PGFPIYELS----------AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN----PGNPCGNVY 190 (343)
Q Consensus 126 ~vl~~~-p~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~----p~nptG~~~ 190 (343)
+|++++ |.|..+... ++..|.+++.+++++ ++.+|++++++++++++++|++++ |+||||.+
T Consensus 103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v- 179 (409)
T 3jzl_A 103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI- 179 (409)
T ss_dssp EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH-
T ss_pred EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc-
Confidence 999998 999988743 356688888887753 467999999999998999999999 99999988
Q ss_pred CHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCC
Q 019298 191 SYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFR 267 (343)
Q Consensus 191 ~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~ 267 (343)
.++++|+++|++ +|+++++|++|+.+.+...+ . .. +..++++|+||.++.+| .+.||++++
T Consensus 180 --~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p---~-~~---g~Div~~S~sK~lgg~~~~~GG~v~~~------- 243 (409)
T 3jzl_A 180 --EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP---P-EV---GADIIAGSLIKNPGGGLAKTGGYIAGK------- 243 (409)
T ss_dssp --HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS---G-GG---TCSEEEEETTSGGGTTTCSSCEEEEEC-------
T ss_pred --ccHHHHHHHHHhhCCCCEEEEeCCcccccccCCc---c-cc---CCeEEEECccccCCccCCceEEEEEeC-------
Confidence 889999999999 99999999999987643221 1 11 23499999999998877 456888884
Q ss_pred chHHHHHHhhhhc---c--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 268 KPKVVERMKKYFD---I--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 268 ~~~~~~~l~~~~~---~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
++++++++.... . ...+......++ ...+ ...-.++++..+++..+.+.|+++ |+.+
T Consensus 244 -~~li~~l~~~~~~~~~g~~~g~~~~~~~~~-l~gl---~~~~~r~~~~~~~a~~la~~L~~~-g~~v 305 (409)
T 3jzl_A 244 -EALVDLCGYRLTTPGIGREAGASLYSLLEM-YQGF---FLAPHVTAQAIKGARFTAAMLAEF-GVEA 305 (409)
T ss_dssp -HHHHHHHHHHHSCTTTGGGCCCCTTCHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred -HHHHHHHHHHhccccccccccccHHHHHHH-HHHH---hhHHHHHHHHHHHHHHHHHHHHhC-CCcc
Confidence 478888876432 1 111111112222 1111 222237778888999999999998 6676
No 179
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.92 E-value=1.9e-24 Score=201.75 Aligned_cols=275 Identities=15% Similarity=0.056 Sum_probs=178.5
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++.++||+.+.+... ++ .+|.+.+++.+++.......|+ .++++.+++.+.+..+ .+++|++++|++++
T Consensus 55 g~~~lD~~~~~~~~~--lG~~~~~v~~a~~~~~~~~~~~~~~-----~~~~~~l~~~la~~~~---~~~~v~~~~sgseA 124 (434)
T 2epj_A 55 GARIVDLVLAYGPLI--LGHKHPRVLEAVEEALARGWLYGAP-----GEAEVLLAEKILGYVK---RGGMIRFVNSGTEA 124 (434)
T ss_dssp CCEEEESSGGGTTCT--TCBTCHHHHHHHHHHHHTCSCCSSC-----CHHHHHHHHHHHHHHC---TTCEEEEESSHHHH
T ss_pred CCEEEEcccchhccc--CCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence 677899998875422 33 6899999999998764322332 2344444444444332 57899999999999
Q ss_pred HHHHHHH---hcCCCCeEEEeCCCCcchHHHHHh--------------cCc------eeEEeecCCCCCCCCCHHHHHhh
Q 019298 113 IDVAMAL---LSRPGANILLPRPGFPIYELSAAF--------------RHI------EVRHFDLLPDKGWEVDLDDIESL 169 (343)
Q Consensus 113 l~~~~~~---l~~~gd~vl~~~p~~~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~d~~~l~~~ 169 (343)
+..+++. +. +++.|++.+|+|+++...+.. .|. ++..++. .|+++|++.
T Consensus 125 ~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 196 (434)
T 2epj_A 125 TMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV 196 (434)
T ss_dssp HHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred HHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence 9999987 44 457888888999875442211 122 2333332 278999988
Q ss_pred hcC--CceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcc
Q 019298 170 ADQ--NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (343)
Q Consensus 170 ~~~--~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 245 (343)
+++ +..++++++| +|+||.+. +.+.+++|.++|++||+++|+||+|.++.. +. ......++...+ +.||||
T Consensus 197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~-g~-~~~~~~~~~~~d---i~s~sK 271 (434)
T 2epj_A 197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRL-GL-EGAQGYFNIEGD---IIVLGK 271 (434)
T ss_dssp HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTS-ST-THHHHHHTCCCS---EEEEEG
T ss_pred HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeC-Cc-chhhHHhCCCCC---eeeecc
Confidence 864 2345566667 57899876 799999999999999999999999997732 22 111111221222 248899
Q ss_pred ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHh
Q 019298 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPS 321 (343)
Q Consensus 246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 321 (343)
.++. |+|+||++++ +++++.+... ...+++.++++++++ .++|+...+ -+..++++++++.+.+.
T Consensus 272 ~l~~-G~~~G~v~~~--------~~~~~~l~~~~~~~~~~t~~~~~~~~aa~-~a~l~~~~~-~~~~~~~~~~~~~l~~~ 340 (434)
T 2epj_A 272 IIGG-GFPVGAVAGS--------REVMSLLTPQGKVFNAGTFNAHPITMAAG-LATLKALEE-EPVYSVSREAAKALEEA 340 (434)
T ss_dssp GGGT-TSSCEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHH-HHHHHHHHH-SCHHHHHHHHHHHHHHH
T ss_pred hhcC-Ccceeeeeec--------HHHHHhhccCCCcccCCCCCcCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHH
Confidence 9987 9999999985 3566666542 122446788887777 454432211 11667777788888777
Q ss_pred hcCCC---CceeeCCCCceEeeec
Q 019298 322 YKLIP---ELINFKSTGSSLKYLD 342 (343)
Q Consensus 322 L~~~~---g~~~~~~~~g~~~~~~ 342 (343)
|+++. ++....+..|+++|++
T Consensus 341 L~~~~~~~~~~~~~~~~g~~~~i~ 364 (434)
T 2epj_A 341 ASEVLDRTGLPYTINRVESMMQLF 364 (434)
T ss_dssp HHHHHHHHTCCEEEEEETTEEEEE
T ss_pred HHHHHhhCCCcEEEEEeeeEEEEE
Confidence 76531 3332123356677765
No 180
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.92 E-value=6.4e-24 Score=194.19 Aligned_cols=240 Identities=15% Similarity=0.089 Sum_probs=176.0
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeC
Q 019298 53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPR 131 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~ 131 (343)
..+.+.+++.+.+... .|.+..+..++|+.++++++ .+++++++|+++++..+++++ .++||+|+++.
T Consensus 15 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~ 83 (373)
T 3frk_A 15 IEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVPS 83 (373)
T ss_dssp HHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEET
T ss_pred CCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECC
Confidence 4677888888877653 46666788999999999993 358999999999999999999 89999999999
Q ss_pred CCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 132 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
|+|..+...++..|.+++.+++++ +++.+|++++++++++++++++ |+||||... ++++|.++|+++|+++|+
T Consensus 84 ~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~---~l~~i~~l~~~~~~~li~ 156 (373)
T 3frk_A 84 NTFIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPA---DMDEIKRIAKKYNLKLIE 156 (373)
T ss_dssp TSCTHHHHHHHHHSCEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCC---CHHHHHHHHHHHTCEEEE
T ss_pred CCcHHHHHHHHHcCCEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCcc---cHHHHHHHHHHcCCEEEE
Confidence 999999999999999999998865 3578999999999988777777 788999984 467888889999999999
Q ss_pred ccCCCccc-cCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-------
Q 019298 212 DEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI------- 281 (343)
Q Consensus 212 D~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~------- 281 (343)
|++|+.+. +++.. ...+. .+++.||| |.++..|. .|++++++ +++.++++.....
T Consensus 157 D~a~~~g~~~~~~~---~~~~~----d~~~~S~~~~K~l~~~g~-gg~~~~~~-------~~~~~~~~~~~~~g~~~~~~ 221 (373)
T 3frk_A 157 DAAQAHGSLYKGMK---VGSLG----DAAGFSFYPAKNLGSLGD-GGAVVTND-------KDLAEKIKALSNYGSEKKYH 221 (373)
T ss_dssp ECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCCSSS-CEEEEESC-------HHHHHHHHHHHBTTCSBTTB
T ss_pred ECCcccCCEECCEe---ccccc----cEEEEeCcCCCccCccce-eEEEEeCC-------HHHHHHHHHHHhcCcccCCc
Confidence 99998643 22221 11111 27888877 88655353 78888753 3576766654321
Q ss_pred ------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 282 ------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 282 ------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
....+++..++. ...+ ..+-+..++.+++.+.+.+.|.+++ +.+
T Consensus 222 ~~~~g~~~~~~~~~aa~~-~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~-~~~ 271 (373)
T 3frk_A 222 HIYKGFNSRLDELQAGFL-RVKL---KYLDKWNEERRKIAQKYIAGINNPN-VII 271 (373)
T ss_dssp CCSCCCBCCCCHHHHHHH-HHHH---HTHHHHHHHHHHHHHHHHHHCCCTT-EEC
T ss_pred cccccccCCCCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhccCc-eEe
Confidence 112233333333 2221 1222366677777888888888875 554
No 181
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.92 E-value=8.2e-23 Score=189.41 Aligned_cols=245 Identities=17% Similarity=0.125 Sum_probs=174.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298 51 FHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL 128 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl 128 (343)
++.++.+.+++. .. ..+.|+.. ....++++.++++++ .+++++++|+++++..++++++++||+|+
T Consensus 32 ~~~~~~~~~~~~---~~-~~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~gd~vi 99 (412)
T 2cb1_A 32 FKTLEEGQERFA---TG-EGYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRPGDEVV 99 (412)
T ss_dssp CSSHHHHHHHHH---HC-CSCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEE
T ss_pred cCChHHHHHHhc---cc-cCcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 556666666654 22 22356643 346788999999883 35899999999999999999999999999
Q ss_pred EeCCCCcchHHHH----HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 129 LPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 129 ~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
++.|+|..+.... +..|.+++.++. |+++|++++++++++|++++|+||||.+.+ +++|+++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~ 168 (412)
T 2cb1_A 100 AAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEE 168 (412)
T ss_dssp EETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred EeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHH
Confidence 9999998755543 446888887754 389999999888999999999999999975 7888999999
Q ss_pred cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCC------C-----------
Q 019298 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF------R----------- 267 (343)
Q Consensus 205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~------~----------- 267 (343)
+|+++|+|++|..+.+... +. ..+.++++.|+||.++++|.|+|++++.++...+ .
T Consensus 169 ~~~~li~D~~~~~~~~~~~---~~----~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (412)
T 2cb1_A 169 AGVALVVDNTFGAAGALCR---PL----AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE 241 (412)
T ss_dssp HTCEEEEECGGGTTTTSCC---GG----GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred cCCEEEEECCCccccccCC---cc----ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence 9999999999987621111 11 1235699999999999999999999887633100 0
Q ss_pred ---chHHHHHHhhhh-cc-ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298 268 ---KPKVVERMKKYF-DI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 268 ---~~~~~~~l~~~~-~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~ 329 (343)
..++.+.++... .. ....++....+. ...+ ..+.+..++..++.+.+.+.|.+.+++.
T Consensus 242 ~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~-~~~l---~~l~~~~~~~~~~~~~l~~~L~~~~~v~ 304 (412)
T 2cb1_A 242 ALRARCFPERVRTLGLSLCGMALSPFNAYLL-FQGL---ETVALRVARMSETARFLAERLQGHPKVK 304 (412)
T ss_dssp HHGGGHHHHHHHHHHTTTTCCCCCHHHHHHH-HHHG---GGHHHHHHHHHHHHHHHHHHHHTCTTCS
T ss_pred ccchHHHHHHHHHHHHHhcCCCCChHHhHHH-HcCC---chHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 013455555443 21 123344444433 2222 2233355566778888899998888887
No 182
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.92 E-value=6.7e-24 Score=195.43 Aligned_cols=212 Identities=16% Similarity=0.072 Sum_probs=157.8
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD 152 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~ 152 (343)
....++|+.++++++ .++.++++++++++..+++ ++++||+|+++.|+|.+... .++..|.+++.++
T Consensus 55 ~~~~~lr~~la~~~g--------~~~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 125 (393)
T 1n8p_A 55 PNRENLERAVAALEN--------AQYGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN 125 (393)
T ss_dssp HHHHHHHHHHHHHTT--------CSEEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred hhHHHHHHHHHHHhC--------CCcEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence 346789999999983 2256666666999999999 88999999999999985443 3455688888886
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc----CcEEEEccCCCccccCCCCCCcc
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL----KTLVIADEVYGHLVFGDKPFVPM 228 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~----~~~~i~D~ay~~~~~~~~~~~~~ 228 (343)
.+ | +++++++++++++|++++|+||||.+++ +++|+++|+++ |+++|+|++|..+.+. .+
T Consensus 126 ~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~~--- 189 (393)
T 1n8p_A 126 DL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--NP--- 189 (393)
T ss_dssp SH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--CG---
T ss_pred CC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--CH---
Confidence 53 6 8899999888999999999999999986 78888889999 9999999999987653 11
Q ss_pred cccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH
Q 019298 229 GVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI 306 (343)
Q Consensus 229 ~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~ 306 (343)
..+ +.++++.|+||.++.+|+|+ ||+++++ +++++.++..... ....++....++ ...+. .+..
T Consensus 190 ~~~---~~di~~~S~sK~~g~~G~rigG~~~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~-~~~l~---~~~~ 255 (393)
T 1n8p_A 190 LNF---GADIVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQNAIGAIPSPFDAWLT-HRGLK---TLHL 255 (393)
T ss_dssp GGG---TCSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHT---THHH
T ss_pred HHc---CCeEEEEECcccccCCCCceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hhccc---hHHH
Confidence 112 35699999999999999999 9988742 3677777765432 234455554444 22222 2223
Q ss_pred HHHHHHHHHHHHHHhhcCCCC
Q 019298 307 HGNFLENFAGSCVPSYKLIPE 327 (343)
Q Consensus 307 ~~~~~~~~~~~~~~~L~~~~g 327 (343)
..++..+++..+.+.|.+.+.
T Consensus 256 ~~~~~~~~~~~l~~~L~~~~~ 276 (393)
T 1n8p_A 256 RVRQAALSANKIAEFLAADKE 276 (393)
T ss_dssp HHHHHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 556666777777788877654
No 183
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.92 E-value=5.3e-24 Score=199.79 Aligned_cols=286 Identities=12% Similarity=0.093 Sum_probs=186.8
Q ss_pred ccc--ceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC---CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298 33 NEK--KVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF---NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (343)
Q Consensus 33 ~~~--~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~ 106 (343)
+++ +++||..|... +.++ .+|.+.+++++++..... ..|+ .....+|++.+++++ +...++|+++
T Consensus 71 dG~~~~ylD~~s~~~~--~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~~L~e~la~~~------~~~~~~v~~~ 141 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWT--AIHGHGHPALDQALTTQLRVMNHVMFGGLT-HEPAARLAKLLVDIT------PAGLDTVFFS 141 (457)
T ss_dssp TTEEEEEEETTHHHHT--CTTCBTCHHHHHHHHHHHHHCSCCCSSSEE-CHHHHHHHHHHHHHS------STTEEEEEEE
T ss_pred CCCeeEEEECCCcHhh--hccCCCCHHHHHHHHHHHHhccCccccccC-CHHHHHHHHHHHHhC------CCCcCEEEEe
Confidence 466 89999888532 2244 789999999999875321 1122 123345555555554 3456799999
Q ss_pred cChHHHHHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhcCc--------------eeEEeecCCCCCCCCCHH
Q 019298 107 SGCTQAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPDKGWEVDLD 164 (343)
Q Consensus 107 ~g~~~al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~d~~ 164 (343)
+|+++++..+++.+.. +| +.|++.+++|.++...+...+. .+..++.........|++
T Consensus 142 ~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~ 221 (457)
T 3tfu_A 142 DSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSA 221 (457)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHH
Confidence 9999999999998864 55 5899999999887655554421 223333222111124788
Q ss_pred HHHhhhc---CCceEEEEeC-CCCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298 165 DIESLAD---QNTVALVIIN-PGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (343)
Q Consensus 165 ~l~~~~~---~~~~~i~~~~-p~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~ 239 (343)
+|+++++ +++++++++. ++|++|..+ +.+.+++|.++|++||+++|+||+|.++.+.+... ....++...+++
T Consensus 222 ~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a~~~~~~~pdii- 299 (457)
T 3tfu_A 222 AFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-AADHAGVSPDIM- 299 (457)
T ss_dssp HHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE-
T ss_pred HHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-HhHhcCCCceEE-
Confidence 9998886 4556666666 689999886 77889999999999999999999999876555421 222223223333
Q ss_pred EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh------hhccccCcchHHHHHHHhccchhhHHHHHHHHHHHH
Q 019298 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK------YFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLEN 313 (343)
Q Consensus 240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~ 313 (343)
||||.++...+|+||++++ +++++.+.. ....+++.++++++++ .++|+...+ -+..+++++
T Consensus 300 --t~sK~l~gG~~~lG~v~~~--------~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa-~aaL~~~~~-~~~~~~~~~ 367 (457)
T 3tfu_A 300 --CVGKALTGGYLSLAATLCT--------ADVAHTISAGAAGALMHGPTFMANPLACAVS-VASVELLLG-QDWRTRITE 367 (457)
T ss_dssp --EECGGGGTTSSCCEEEEEE--------HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHH-HHHHHHHHT-SCHHHHHHH
T ss_pred --EEChhhhCCCcceEEEEEc--------HHHHHHhhccCCCceeEecCCCcCHHHHHHH-HHHHHHHhh-hHHHHHHHH
Confidence 8899875433799999995 478888752 1223567788888887 454432100 015666777
Q ss_pred HHHHHHHhhcCC---CCceeeCCCCceEeeec
Q 019298 314 FAGSCVPSYKLI---PELINFKSTGSSLKYLD 342 (343)
Q Consensus 314 ~~~~~~~~L~~~---~g~~~~~~~~g~~~~~~ 342 (343)
+++.+.+.|+.+ |++....+. |+|+|++
T Consensus 368 ~~~~l~~~L~~l~~~~~v~~vr~~-G~~~~i~ 398 (457)
T 3tfu_A 368 LAAGLTAGLDTARALPAVTDVRVC-GAIGVIE 398 (457)
T ss_dssp HHHHHHHHHGGGGGSTTEEEEEEC-SSCEEEE
T ss_pred HHHHHHHHHHHHhcCCCeeeeecC-CeEEEEE
Confidence 777777777653 455433333 5566654
No 184
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.92 E-value=1.7e-23 Score=193.41 Aligned_cols=242 Identities=17% Similarity=0.128 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE---ecChHHHHHHHHHHhcCCCC
Q 019298 55 HVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA 125 (343)
Q Consensus 55 ~~~~~~~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~al~~~~~~l~~~gd 125 (343)
+.+++++.++.... ....|+. .|...|++.+|++++ .+..++ ++|+++++..++.+++++||
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~pGD 116 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGYGD-IGRDSLDAVYARVFN--------TESALVRPHFVNGTHALGAALFGNLRPGN 116 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCCCH-HHHHHHHHHHHHHhC--------CcceEEeCCCccHHHHHHHHHHHHhCCCC
Confidence 56777776643111 1224444 357889999999983 344455 78889999999999999999
Q ss_pred eEEEeC-CCCcchHHH-----------HHhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCceEEEEeC----CCCCcc
Q 019298 126 NILLPR-PGFPIYELS-----------AAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIIN----PGNPCG 187 (343)
Q Consensus 126 ~vl~~~-p~~~~~~~~-----------~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~~~~----p~nptG 187 (343)
+|++++ |.|..+... ++..|.+++.++++. ++.+|+++++++++ +++++|++++ |+||||
T Consensus 117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg 194 (427)
T 3i16_A 117 TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRAL 194 (427)
T ss_dssp EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCC
T ss_pred EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcc
Confidence 999999 999887633 455688888887753 35689999999998 7899999999 999999
Q ss_pred cccCHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCC
Q 019298 188 NVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCG 264 (343)
Q Consensus 188 ~~~~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~ 264 (343)
.+ .++++|+++|++ +|+++++|++|+.+.+...+ . .. +..++++|+||.++.+| .+.||++++
T Consensus 195 ~i---~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p---~-~~---gaDiv~~S~sK~lgg~g~~~gG~i~~~---- 260 (427)
T 3i16_A 195 LI---EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP---T-DV---GADLIAGSLIKNIGGGIAPTGGYLAGT---- 260 (427)
T ss_dssp CH---HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG---G-GG---TCSEEEEETTSGGGTTTCCSCEEEEEC----
T ss_pred cH---HHHHHHHHHHHHhCCCCEEEEECCCccccccCCc---c-cc---CCeEEEecCcccCCCCCCceEEEEEEC----
Confidence 88 899999999999 99999999999987643221 1 11 23499999999998877 678999884
Q ss_pred CCCchHHHHHHhhhhc---cccCcch-HH-HHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 265 MFRKPKVVERMKKYFD---ILGDPAT-FI-QVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 265 ~~~~~~~~~~l~~~~~---~~~~~~~-~~-~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
++++++++.... ......+ +. ..++ ++.....-.++++..+++..+.+.|+++ |+.+
T Consensus 261 ----~~li~~l~~~~~~~~~g~~~~~~~~~a~~~----l~gl~~~~~r~~~~~~~a~~la~~L~~~-g~~V 322 (427)
T 3i16_A 261 ----KDCIEKTSYRLTVPGIGGECGSTFGVVRSM----YQGLFLAPHISMEALKGAILCSRIMELA-GFEV 322 (427)
T ss_dssp ----HHHHHHHHHHHSCTTTGGGCCCCTTCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred ----HHHHHHHHHhcccCccCccCCccHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Confidence 478888887421 1111111 21 1122 1111222237788888999999999988 5666
No 185
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.92 E-value=3.7e-23 Score=191.19 Aligned_cols=241 Identities=17% Similarity=0.114 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE---ecChHHHHHHHHHHhcCCCC
Q 019298 55 HVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA 125 (343)
Q Consensus 55 ~~~~~~~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~al~~~~~~l~~~gd 125 (343)
+.+++++.+..... ....|+.. |...|++.++++++ .+..++ ++|+++++..++.++++|||
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-g~~~Le~~lA~l~g--------~e~alv~p~~~sGt~A~~~al~all~pGD 117 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYNDI-GRDSLDRVYANIFN--------TESAFVRPHFVNGTHAIGAALFGNLRPND 117 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCch-hHHHHHHHHHHHhC--------CCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence 67777777753321 12345543 67889999999983 455566 78889999999999999999
Q ss_pred eEEEeC-CCCcchHH-----------HHHhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCceEEEEeC----CCCCcc
Q 019298 126 NILLPR-PGFPIYEL-----------SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIIN----PGNPCG 187 (343)
Q Consensus 126 ~vl~~~-p~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~~~~----p~nptG 187 (343)
+|++.+ |.|..+.. .++..|.+++.++. +++.+|+++++++++ +++++|++++ |+||||
T Consensus 118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg 194 (427)
T 3hvy_A 118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL 194 (427)
T ss_dssp EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence 999999 99988763 34557888888876 356799999999998 7899999999 999998
Q ss_pred cccCHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCC
Q 019298 188 NVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCG 264 (343)
Q Consensus 188 ~~~~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~ 264 (343)
.+ .++++|+++|++ +|+++++|++|+.+.+...+ . .. +..++++|+||+++.+| .+.||++++
T Consensus 195 ~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p---~-~~---gaDiv~~S~sK~lgg~g~~~GG~i~~~---- 260 (427)
T 3hvy_A 195 RI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEP---T-DV---GADIIAGSLIKNIGGGIATTGGYIAGK---- 260 (427)
T ss_dssp CH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG---G-GG---TCSEEEEETTSGGGTTTCCSCEEEEEC----
T ss_pred cH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCCC---c-cc---CCeEEEECCcccccccccceEEEEEEC----
Confidence 87 889999999999 89999999999887643221 1 11 23499999999988776 566888874
Q ss_pred CCCchHHHHHHhhhhc---cc--cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 265 MFRKPKVVERMKKYFD---IL--GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 265 ~~~~~~~~~~l~~~~~---~~--~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
++++++++.... .. ..++.....++ ...+ ...-.++++..++...+.+.|+++ |+.+
T Consensus 261 ----~~li~~l~~~~~~~~~g~~~~~~~~~a~~~-~~gl---~~~~~r~~~~~~~a~~la~~L~~~-g~~V 322 (427)
T 3hvy_A 261 ----EEYVTQATFRVTVPGIGGECGSTFGVMRSL-YEGL---FMAPHVTIEAVKGAVFCARIMELA-GFDV 322 (427)
T ss_dssp ----HHHHHHHHHHHSCTTTGGGCCCCTTCHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred ----HHHHHHHHHHhhcCCcccccCCCHHHHHHH-HHhH---hHHHHHHHHHHHHHHHHHHHHHhC-CCee
Confidence 478888877432 11 11111112222 1111 112227778888899999999988 5666
No 186
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.91 E-value=3.1e-23 Score=195.60 Aligned_cols=286 Identities=14% Similarity=0.098 Sum_probs=190.7
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||+.|... ..++ .+|.+.+++++++.... .+....+..+.++++++++.+.++ .+.++|++++|+++
T Consensus 52 ~G~~ylD~~s~~~~--~~lGh~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGse 125 (476)
T 3i5t_A 52 DGRRLIDGPAGMWC--AQVGYGRREIVDAMAHQAMVLP--YASPWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGST 125 (476)
T ss_dssp TCCEEEETTHHHHT--CTTCBCCHHHHHHHHHHHHHCC--CCCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHHH
T ss_pred CCCEEEECCCchhh--ccCCCCCHHHHHHHHHHHHhcc--CcccCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchHH
Confidence 37788999988533 2244 68999999999987532 122224567888999999987553 35679999999999
Q ss_pred HHHHHHHHhcC--------CCCeEEEeCCCCcchHHHHHhcCce-------------eEEee--cCCCCCCCCC------
Q 019298 112 AIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHIE-------------VRHFD--LLPDKGWEVD------ 162 (343)
Q Consensus 112 al~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~--~~~~~~~~~d------ 162 (343)
++..+++.+.. .+++|++.+|+|+++...+...+.. +..++ ..... +..+
T Consensus 126 A~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~ 204 (476)
T 3i5t_A 126 AVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAFLD 204 (476)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHHHH
Confidence 99999998853 3579999999999887666544322 11222 11111 1222
Q ss_pred --HHHHHhhhc----CCceEEEEeCCCCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc-ccCCC
Q 019298 163 --LDDIESLAD----QNTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG-VFGST 234 (343)
Q Consensus 163 --~~~l~~~~~----~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~-~~~~~ 234 (343)
+++|++.+. +++.+++++.++|++|. +++.+.+++|.++|++||+++|+||+|.++...+.. .... .++..
T Consensus 205 ~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~-~~~~~~~~v~ 283 (476)
T 3i5t_A 205 DLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEW-FASEKVFGVV 283 (476)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHTTCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCc-eeeecccCCC
Confidence 678888775 34455555555788886 788899999999999999999999999998665542 1222 22222
Q ss_pred CCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHHH
Q 019298 235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQIM 305 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~l 305 (343)
.+++ ++||+++. | +|+|+++++ +++++.+... ...+++.++++++++ .++|+...+ -
T Consensus 284 pdi~---t~sK~l~~-G~~plg~v~~~--------~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa-~aaL~~~~~-~ 349 (476)
T 3i5t_A 284 PDII---TFAKGVTS-GYVPLGGLAIS--------EAVLARISGENAKGSWFTNGYTYSNQPVACAAA-LANIELMER-E 349 (476)
T ss_dssp CSEE---EECGGGGT-TSSCCEEEEEC--------HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHH-HHHHHHHHH-T
T ss_pred cchh---hhhhhhcC-CCcCeEEEEEC--------HHHHHHHhcCCcccccccccCCCCcCHHHHHHH-HHHHHHHHh-H
Confidence 2333 57899875 8 999999985 4788877653 223567788888888 555542211 1
Q ss_pred HHHHHHHHHHHHHHHhhcCC---CCceeeCCCCceEeee
Q 019298 306 IHGNFLENFAGSCVPSYKLI---PELINFKSTGSSLKYL 341 (343)
Q Consensus 306 ~~~~~~~~~~~~~~~~L~~~---~g~~~~~~~~g~~~~~ 341 (343)
+..++++++.+.+.+.|+.+ |.+....+.|. |+++
T Consensus 350 ~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~-~~~i 387 (476)
T 3i5t_A 350 GIVDQAREMADYFAAALASLRDLPGVAETRSVGL-VGCV 387 (476)
T ss_dssp THHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETT-EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc-eeEE
Confidence 15666667777776666543 44444344444 4444
No 187
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.91 E-value=5.6e-23 Score=190.93 Aligned_cols=277 Identities=14% Similarity=0.123 Sum_probs=168.8
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-----CCCCHHHHHHHH-HHHhhhCCCCCCCCcE-EEec
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-----TAGLPLTRRAIA-EYLSRDLPYKLTPNDV-FVTS 107 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia-~~~~~~~~~~~~~~~i-~~~~ 107 (343)
.+.++|..+. ...+|.+.+++.+++.+.....|+. .....+..+.++ +.+.+.++ .+.+ ++++
T Consensus 32 ~~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~~~v~~~ 101 (425)
T 3ecd_A 32 QSQVELIASE------NIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFN----AGHANVQPH 101 (425)
T ss_dssp HHSEECCTTC------CCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHT----CSEEECCCS
T ss_pred hcceeeeccc------CCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhC----CCCceeecC
Confidence 3568886665 1238999999998875322122221 111111222222 33333222 2334 4588
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCCcc---hHHHHHhcCcee--EEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeC
Q 019298 108 GCTQAIDVAMALLSRPGANILLPRPGFPI---YELSAAFRHIEV--RHFDLLPDKGWEVDLDDIESLAD-QNTVALVIIN 181 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~---~~~~~~~~g~~~--~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~ 181 (343)
|+++++..++++++++||+|+++.|+|.. +.......|..+ +.++.++ +++.+|+++|++.++ ++++++++++
T Consensus 102 ~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~ 180 (425)
T 3ecd_A 102 SGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLIIAGF 180 (425)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEEEEC
T ss_pred chHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEEEEcc
Confidence 88999999999999999999999999987 322222445543 4444432 457899999999986 5789999999
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~ 260 (343)
|+||+. .++++|.++|++||+++|+||+|. ++.+.+.....+.. ..++++|+||++ +|.|+||++++
T Consensus 181 ~~~~~~-----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~-----~di~~~s~sK~l--~g~~~g~~~~~ 248 (425)
T 3ecd_A 181 SAYPRK-----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH-----AHVVTSTTHKTL--RGPRGGFVLTN 248 (425)
T ss_dssp SCCCSC-----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-----CSEEEEESSGGG--CCCSCEEEEES
T ss_pred ccCCCc-----CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc-----CcEEEecCCccc--CCCCcEEEEeC
Confidence 999753 446899999999999999999964 33444332222221 128899999996 67789999986
Q ss_pred CCCCCCCchHHHHHHhhhhcc--ccCcchHHHHHHHhccchh-hHHH-HHHHHHHHHHHHHHHHhhcCCCCceeeCC-CC
Q 019298 261 DPCGMFRKPKVVERMKKYFDI--LGDPATFIQVCIMYGCLST-IMQI-MIHGNFLENFAGSCVPSYKLIPELINFKS-TG 335 (343)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~~l~~-~~~~-l~~~~~~~~~~~~~~~~L~~~~g~~~~~~-~~ 335 (343)
+ +++.+.+...... ...++.....++ ..++.. ..+. -+.+++++++++.+.+.|.+. |+.+..+ .+
T Consensus 249 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 319 (425)
T 3ecd_A 249 D-------EEIAKKINSAVFPGLQGGPLMHVIAGK-AVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTD 319 (425)
T ss_dssp C-------HHHHHHHHHHHC-----CCCHHHHHHH-HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCS
T ss_pred C-------HHHHHHHHhhhCccccCCccHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCC
Confidence 3 3566666655432 123334333333 222221 1223 347888889999999999886 7886543 57
Q ss_pred ceEeeecC
Q 019298 336 SSLKYLDL 343 (343)
Q Consensus 336 g~~~~~~l 343 (343)
++++|+++
T Consensus 320 ~~~~~~~~ 327 (425)
T 3ecd_A 320 NHLLLVDL 327 (425)
T ss_dssp SSEEEEEC
T ss_pred ceEEEEEe
Confidence 88888753
No 188
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.91 E-value=9.3e-24 Score=199.52 Aligned_cols=287 Identities=13% Similarity=0.041 Sum_probs=189.2
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCC--CcEEEe
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTP--NDVFVT 106 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~~ 106 (343)
.+.|+|..++ .++++.+++++.+.+.+....+|+ ...+..++++.+.+++.+.+|...+. .+|+++
T Consensus 44 ~~~i~L~a~e------~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~ 117 (483)
T 1rv3_A 44 RVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY 117 (483)
T ss_dssp HSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred hcCeEEEcCC------CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC
Confidence 4578997765 246899999998887653222333 22234678877778887777754221 247888
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH--------HHHhcCceeEEeec--CCCCCCCCCHHHHHhhhc-CCce
Q 019298 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYEL--------SAAFRHIEVRHFDL--LPDKGWEVDLDDIESLAD-QNTV 175 (343)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~--~~~~~~~~d~~~l~~~~~-~~~~ 175 (343)
+|+ +++..++.++++|||+|++++|+|.++.. .+...|..++.+++ ++ +++.+|+++|++.++ .+++
T Consensus 118 sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~~~~iD~d~le~~i~~~~tk 195 (483)
T 1rv3_A 118 SGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-DTGYIDYDRLEENARLFHPK 195 (483)
T ss_dssp SHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred CcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-CCCcCCHHHHHHHHhhcCCc
Confidence 887 88888889999999999999999877643 12333432444444 43 457899999999998 6899
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
+|++ +++|++ .+++ +++|.++|+++|+++|+|++|. ++.+.+....++. ...+++.|+||++ .|+|.
T Consensus 196 lIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-----~~div~~s~~K~l--~Gprg 263 (483)
T 1rv3_A 196 LIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-----HCHVVTTTTHKTL--RGCRA 263 (483)
T ss_dssp EEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-----TCSEEEEESSGGG--CCCSC
T ss_pred EEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-----CCcEEEecCcccC--CCCCc
Confidence 9988 888888 7755 7888889999999999999987 3333332222221 1238899999985 68889
Q ss_pred EEEEEeCCCCCCC-c------hHHHHHHhhhh-c-cccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhc
Q 019298 255 GWFVTTDPCGMFR-K------PKVVERMKKYF-D-ILGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYK 323 (343)
Q Consensus 255 G~i~~~~~~~~~~-~------~~~~~~l~~~~-~-~~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~ 323 (343)
||++++++..... . -++.+.+.... . ..+.++.....++ .+++... ..+-+.++++.++++.+.+.|.
T Consensus 264 G~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal-~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 342 (483)
T 1rv3_A 264 GMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGV-AVALKQAMTPEFKEYQRQVVANCRALSAALV 342 (483)
T ss_dssp EEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHH-HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHH-HHHHHHHhChhHHHHHHHHHHHHHHHHHHHH
Confidence 9999976421000 0 01333333221 1 1223334433333 3444322 2333488889999999999999
Q ss_pred CCCCceeeCCC-CceEeeecC
Q 019298 324 LIPELINFKST-GSSLKYLDL 343 (343)
Q Consensus 324 ~~~g~~~~~~~-~g~~~~~~l 343 (343)
++ |+.+..+. +.+++|+++
T Consensus 343 ~~-g~~~~~~~~~~~~~~v~~ 362 (483)
T 1rv3_A 343 EL-GYKIVTGGSDNHLILVDL 362 (483)
T ss_dssp HT-TCEEGGGSCSSSEEEEEG
T ss_pred hc-CCEeccCCCCCceEEEec
Confidence 88 88865543 356777653
No 189
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.91 E-value=6.8e-23 Score=184.26 Aligned_cols=180 Identities=16% Similarity=0.089 Sum_probs=143.1
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeecCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPD 156 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~ 156 (343)
++++.++++++ .+ +.+ +++++++++..+++++.++||+|+++.|+|..+...+ ...|.+++.++.
T Consensus 2 ~l~~~la~~~g------~~-~~i-~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 70 (331)
T 1pff_A 2 ALEGKIAKLEH------AE-ACA-ATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM--- 70 (331)
T ss_dssp HHHHHHHHHHT------CS-EEE-EESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred hHHHHHHHHhC------CC-eEE-EeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence 68999999983 23 444 4545589999999999999999999999999876654 447888888764
Q ss_pred CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh-cCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298 157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK-LKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (343)
Q Consensus 157 ~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~-~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~ 235 (343)
.|++++++.++++++++++++|+||||.+++ +++|.++|++ +|+++|+|++|..+.+.. +. ..+
T Consensus 71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~----~~----~~~ 135 (331)
T 1pff_A 71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN----PL----DLG 135 (331)
T ss_dssp ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC----GG----GGT
T ss_pred ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC----hh----hcC
Confidence 3788999999888999999999999999985 7888999999 999999999999755421 11 124
Q ss_pred CEEEEccCccccCCCCCc-EEEEEEeCCCCCCCchHHHHHHhhhhcc--ccCcchHHHHHH
Q 019298 236 PILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFDI--LGDPATFIQVCI 293 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G~r-~G~i~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~ 293 (343)
++++++|+||.|+++|.| +||+++++ ++++++++..... ....++..+.++
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAWLI 189 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHH
T ss_pred CcEEEEECccccCCCCCceEEEEEeCc-------HHHHHHHHHHHHhhcCCCCCHHHHHHH
Confidence 569999999999999999 79998842 2688888776543 345677766654
No 190
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.91 E-value=7.2e-23 Score=189.42 Aligned_cols=214 Identities=11% Similarity=0.042 Sum_probs=156.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeec
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDL 153 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~ 153 (343)
...++++.+|++++ .+++++++|+++++..++++++++||+|+++.+.|.+....+ +..|.++..++.
T Consensus 83 ~~~~le~~lA~l~g--------~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 154 (415)
T 2fq6_A 83 THFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP 154 (415)
T ss_dssp HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred hHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC
Confidence 45679999999883 346777889999999999999999999999999998776544 446888888754
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCccccc
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVF 231 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~~~~ 231 (343)
. |++++++++++++++|++++|+||||.+++ +++|+++|++ +|+++|+|++|+..... .++ .
T Consensus 155 ~-------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~----~p~-~- 218 (415)
T 2fq6_A 155 L-------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF----KAL-D- 218 (415)
T ss_dssp T-------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS----CGG-G-
T ss_pred C-------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC----Ccc-c-
Confidence 2 789999999888999999999999999975 6788888999 99999999999864321 112 1
Q ss_pred CCCCCEEEEccCccccCCCCCc-EEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHH
Q 019298 232 GSTVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGN 309 (343)
Q Consensus 232 ~~~~~~i~~~S~sK~~~~~G~r-~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~ 309 (343)
.+..+++.|+||.++.+|.+ +||+++++ +++++++..... ....++....++ ...+ ..+..+.+
T Consensus 219 --~g~Div~~S~sK~lg~~g~~~~G~l~~~~--------~~~~~l~~~~~~~G~~~~~~~a~~~-~~~l---~~l~~r~~ 284 (415)
T 2fq6_A 219 --FGIDVSIQAATKYLVGHSDAMIGTAVCNA--------RCWEQLRENAYLMGQMVDADTAYIT-SRGL---RTLGVRLR 284 (415)
T ss_dssp --GTCSEEEEETTTTTTCSSSCCCEEEEECT--------TTHHHHHHHHHHTTCCCCHHHHHHH-HHHH---HHHHHHHH
T ss_pred --cCCeEEEEeCccccCCCCCceEEEEEeCH--------HHHHHHHHHHHhcCCCCCHHHHHHH-Hhhh---hHHHHHHH
Confidence 23459999999999998865 58888753 345555544321 223344433333 1111 22223666
Q ss_pred HHHHHHHHHHHhhcCCCCce
Q 019298 310 FLENFAGSCVPSYKLIPELI 329 (343)
Q Consensus 310 ~~~~~~~~~~~~L~~~~g~~ 329 (343)
+..++...+.+.|++.|++.
T Consensus 285 ~~~~n~~~l~~~L~~~~~v~ 304 (415)
T 2fq6_A 285 QHHESSLKVAEWLAEHPQVA 304 (415)
T ss_dssp HHHHHHHHHHHHHHTCTTEE
T ss_pred HHHHHHHHHHHHHHcCCCee
Confidence 67778888888887765554
No 191
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.91 E-value=4.9e-24 Score=194.12 Aligned_cols=254 Identities=11% Similarity=0.029 Sum_probs=173.0
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-c-EEE
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-D-VFV 105 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~-i~~ 105 (343)
+++.++.|. .++++.+++++.+.+.+.. ...|.+ +..++++++.+.+.+.+|. +++ + +++
T Consensus 4 ~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~--~~~~~~i~~ 73 (362)
T 2c0r_A 4 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGA--VYEAVHNEAQARLLALLGN--PTGYKVLFI 73 (362)
T ss_dssp CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSH--HHHHHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred ceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence 345566553 5788999999998875310 111211 2345666777777666654 443 6 467
Q ss_pred ecChHHHHHHHHHHhcCCCCeEEEeCCCCcch--HHHHHhcCceeEEeecCCC--CCCCCCHHHHHhhhcCCceEEEEeC
Q 019298 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPD--KGWEVDLDDIESLADQNTVALVIIN 181 (343)
Q Consensus 106 ~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~i~~~~ 181 (343)
|+|+++++..++.+++++||+|+++.+.+... ...++..| +++.++++.+ .+..+|.++++ ++++++++++++
T Consensus 74 t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~ 150 (362)
T 2c0r_A 74 QGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTS 150 (362)
T ss_dssp SSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEES
T ss_pred CCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeC
Confidence 89999999999999999999999887765442 35667779 9998887632 22234666553 566889999999
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
|+||||..++ ++++| +|+++|+|++|..+.. +..+..+ .+++.|+||.||++| +||++++.
T Consensus 151 ~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~----~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~~ 211 (362)
T 2c0r_A 151 NETIEGAQFK--AFPDT------GSVPLIGDMSSDILSR----PFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVRE 211 (362)
T ss_dssp EETTTTEECS--SCCCC------TTSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTCCSS--CEEEEEEG
T ss_pred CcCccceecc--ccccc------CCCEEEEEChhhccCC----ccchhHC-----cEEEEeccccccCcC--cEEEEEcH
Confidence 9999999754 35554 7999999999987431 1122221 378889999999888 99999865
Q ss_pred CCCCCCchHHHHHHhh-------------hhccccCcchHHHHHHHhccchhhHH---HHHHHHHHHHHHHHHHHhhcCC
Q 019298 262 PCGMFRKPKVVERMKK-------------YFDILGDPATFIQVCIMYGCLSTIMQ---IMIHGNFLENFAGSCVPSYKLI 325 (343)
Q Consensus 262 ~~~~~~~~~~~~~l~~-------------~~~~~~~~~~~~~~a~~~~~l~~~~~---~l~~~~~~~~~~~~~~~~L~~~ 325 (343)
+ ++++++. .....++++...+.++ .++|+...+ +-+.+++++++++.+.+.|+++
T Consensus 212 ~--------~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 282 (362)
T 2c0r_A 212 D--------LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMV-NEVLKWIEERGGLEGVQQANRKKASLIYDAIDQS 282 (362)
T ss_dssp G--------GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred H--------HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 2 2222221 0112346677777777 666654322 3348889999999999999988
Q ss_pred CCc-ee
Q 019298 326 PEL-IN 330 (343)
Q Consensus 326 ~g~-~~ 330 (343)
+++ .+
T Consensus 283 ~~~~~~ 288 (362)
T 2c0r_A 283 GGFYRG 288 (362)
T ss_dssp TTSSEE
T ss_pred CCcccc
Confidence 546 64
No 192
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.91 E-value=1.1e-22 Score=189.45 Aligned_cols=217 Identities=14% Similarity=0.106 Sum_probs=159.6
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEeecC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLL 154 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 154 (343)
..++++.++++++ .. +.+++++| ++++..++++++++||+|+++.|+|.++... ++..|.+++.++.+
T Consensus 116 ~~~l~~~lA~l~g------~~-~~v~~~sG-~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 187 (445)
T 1qgn_A 116 TVVLEEKISALEG------AE-STLLMASG-MCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA 187 (445)
T ss_dssp HHHHHHHHHHHHT------CS-EEEEESCH-HHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS
T ss_pred HHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 4589999999883 22 44555554 5999999999999999999999999876664 45678888888652
Q ss_pred CCCCCCCCHHHHHhhhcCCc-eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298 155 PDKGWEVDLDDIESLADQNT-VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (343)
Q Consensus 155 ~~~~~~~d~~~l~~~~~~~~-~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~ 233 (343)
|++++++++++++ ++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... .+. .
T Consensus 188 -------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~----~~~----~ 249 (445)
T 1qgn_A 188 -------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ----KAL----A 249 (445)
T ss_dssp -------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CTT----T
T ss_pred -------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc----c
Confidence 7999999998888 99999999999999975 678888999999999999999864321 111 1
Q ss_pred CCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHH
Q 019298 234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFL 311 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~ 311 (343)
.+..++++|+||.++..| .++||++++ ++++++++..... ....+++...++ ...+ ..+..+.++.
T Consensus 250 ~g~Div~~S~sK~~gg~gd~~~G~l~~~--------~~l~~~l~~~~~~~g~~~~~~~a~~~-~~~l---~~l~~r~~~~ 317 (445)
T 1qgn_A 250 LGADLVLHSATKFLGGHNDVLAGCISGP--------LKLVSEIRNLHHILGGALNPNAAYLI-IRGM---KTLHLRVQQQ 317 (445)
T ss_dssp TTCSEEEECTTTTTTCSSSCCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHH-HHHG---GGHHHHHHHH
T ss_pred cCCEEEEECCcccccccccceEEEEEEC--------HHHHHHHHHHHHHhCCCCCHHHHHHH-HHhH---HHHHHHHHHH
Confidence 234599999999998776 579999984 3677777655432 233455544433 2222 2222355667
Q ss_pred HHHHHHHHHhhcCCCCce-eeCC
Q 019298 312 ENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 312 ~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
.+++..+.+.|+++|++. +..|
T Consensus 318 ~~~a~~l~~~L~~~p~v~~v~~p 340 (445)
T 1qgn_A 318 NSTALRMAEILEAHPKVRHVYYP 340 (445)
T ss_dssp HHHHHHHHHHHHTCTTEEEEECT
T ss_pred HHHHHHHHHHHhcCCCceEEECC
Confidence 777888999999888873 5444
No 193
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.91 E-value=2e-23 Score=194.53 Aligned_cols=284 Identities=15% Similarity=0.059 Sum_probs=171.4
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.++||+.+... +.++ .+|.+.+++.+++.......|+. ....++++.+++++ + .++++++++|+++
T Consensus 51 ~g~~ylD~~~~~~~--~~lG~~~p~v~~A~~~~~~~~~~~~~~~-~~~~~la~~l~~~~----~---~~~~v~~~~sGse 120 (429)
T 4e77_A 51 DGKAYIDYVGSWGP--MILGHNHPAIRQAVIEAVERGLSFGAPT-EMEVKMAQLVTDLV----P---TMDMVRMVNSGTE 120 (429)
T ss_dssp TCCEEEESSGGGTT--CTTCBTCHHHHHHHHHHHTTCSCCSSCC-HHHHHHHHHHHHHS----T---TCSEEEEESSHHH
T ss_pred CCCEEEECCCchhc--cccCCCCHHHHHHHHHHHHhCcccCCCC-HHHHHHHHHHHhhC----C---CCCEEEEeCcHHH
Confidence 37788999988744 2244 68999999999987643333432 23345555555554 2 5789999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHh-cCceeEEeecCCCCCC------------CCCHHHHHhhhcC--Cc
Q 019298 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAF-RHIEVRHFDLLPDKGW------------EVDLDDIESLADQ--NT 174 (343)
Q Consensus 112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~------------~~d~~~l~~~~~~--~~ 174 (343)
++..+++... ..++.|++.+++|+++...+.. .+.....+......+. .-|+++|++.++. +.
T Consensus 121 a~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 200 (429)
T 4e77_A 121 ATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQE 200 (429)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTT
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCC
Confidence 9999998643 2567899999999876542211 1111000000000000 0178999998864 34
Q ss_pred eEEEEeCCCCCc-cccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298 175 VALVIINPGNPC-GNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (343)
Q Consensus 175 ~~i~~~~p~npt-G~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 252 (343)
.++++++|+|++ |... +.+.+++|.++|++||+++|+||+|.++ ..+.. .....++...+ +.|+||.++ +|+
T Consensus 201 ~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~-~~~~~~~~~pd---i~t~sK~~~-~G~ 274 (429)
T 4e77_A 201 VACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA-GAQDYYHVIPD---LTCLGKIIG-GGM 274 (429)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT-CHHHHTTCCCS---EEEEEGGGG-TTS
T ss_pred EEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc-hHHHhcCCCCC---eeeeccccc-CCC
Confidence 566778886554 4443 3556999999999999999999999987 43331 12222222222 248899998 799
Q ss_pred cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC----
Q 019298 253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL---- 324 (343)
Q Consensus 253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~---- 324 (343)
|+||++++ +++++.+... ...+++.++++++++ .++|+...+ -+..++++++++.+.+.|++
T Consensus 275 ~~G~~~~~--------~~~~~~l~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~ 344 (429)
T 4e77_A 275 PVGAFGGR--------REVMNALAPTGPVYQAGTLSGNPIAMAAG-FACLTEISQ-VGVYETLTELTDSLATGLRHAAKE 344 (429)
T ss_dssp CCEEEEEC--------HHHHTTBTTTSSBCC--CCCCCHHHHHHH-HHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEC--------HHHHHHhccCCCccccCCCCCCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999884 4677766642 223457788888877 555442100 11445555555555555543
Q ss_pred CCCceeeCCCCceEeeecC
Q 019298 325 IPELINFKSTGSSLKYLDL 343 (343)
Q Consensus 325 ~~g~~~~~~~~g~~~~~~l 343 (343)
+ ++....+..|+|+|+++
T Consensus 345 ~-~~~~~~~~~g~~~~~~~ 362 (429)
T 4e77_A 345 E-NIPLVVNHVGGMFGLFF 362 (429)
T ss_dssp T-TCCCEEEEETTEEEEEC
T ss_pred C-CCceEEEEeeeEEEEEE
Confidence 3 33322344577777653
No 194
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.91 E-value=9.9e-23 Score=191.86 Aligned_cols=286 Identities=15% Similarity=0.087 Sum_probs=185.8
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
++++++||+.|... +.++ .+|.+.++++++++.... .|....+..+.+.++++.+.+.. +.+.++|++++|+++
T Consensus 53 ~G~~ylD~~s~~~~--~~lGh~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~--~~~~~~v~~~~sGse 127 (472)
T 3hmu_A 53 EGEEILDAMAGLWC--VNIGYGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELA--PGDLNHVFFAGGGSE 127 (472)
T ss_dssp TCCEEECTTHHHHT--CTTCBCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHS--CTTEEEEEEESSHHH
T ss_pred CCCEEEECCCchhh--ccCCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCHHH
Confidence 37789999888532 2244 589999999999875321 23333334456666666665543 345679999999999
Q ss_pred HHHHHHHHhcC--------CCCeEEEeCCCCcchHHHHHhcCc------------eeEEeecCC--C-CCCCCC------
Q 019298 112 AIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI------------EVRHFDLLP--D-KGWEVD------ 162 (343)
Q Consensus 112 al~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~d------ 162 (343)
++..+++.+.. ++++|++.+|+|.++...+...+. .+..++... . +++ .|
T Consensus 128 A~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~ 206 (472)
T 3hmu_A 128 ANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGL 206 (472)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHH
Confidence 99999998864 468999999999988766555443 233333211 0 111 33
Q ss_pred --HHHHHhhhcC---CceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298 163 --LDDIESLADQ---NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (343)
Q Consensus 163 --~~~l~~~~~~---~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~ 235 (343)
+++|++.+.. +..++++++| +|++|.+. +.+.+++|.++|++||+++|+||+|.++...+.. .....++...
T Consensus 207 ~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~-~a~~~~~v~p 285 (472)
T 3hmu_A 207 ARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNW-FGTQTMGIRP 285 (472)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHHTCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCcc-chhHHhCCCC
Confidence 7788887752 3345555555 67778765 8889999999999999999999999998665532 1222222222
Q ss_pred CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh---hccccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE 312 (343)
Q Consensus 236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~ 312 (343)
+++ +|||+++..|+|+||++++ +++++.+... ...+++.++++++++ .++|+...+ -+..++++
T Consensus 286 di~---t~sK~l~gg~~plG~v~~~--------~~i~~~~~~~~~~~~~t~~~np~a~aAa-~aaL~~~~~-~~~~~~~~ 352 (472)
T 3hmu_A 286 HIM---TIAKGLSSGYAPIGGSIVC--------DEVAHVIGKDEFNHGYTYSGHPVAAAVA-LENLRILEE-ENILDHVR 352 (472)
T ss_dssp SEE---EECGGGTTTSSCCEEEEEE--------HHHHHHHTTSCBCCCCTTTTCHHHHHHH-HHHHHHHHH-TTHHHHHH
T ss_pred cee---eechhhhcCCcceEEEEEC--------HHHHHhcccCCccccCCCCCCHHHHHHH-HHHHHHHHH-hHHHHHHH
Confidence 333 5789988777999999995 4788888321 223567788888888 555542111 11555566
Q ss_pred -HHHHHHHHhhcC---CCCceeeCCCCceE
Q 019298 313 -NFAGSCVPSYKL---IPELINFKSTGSSL 338 (343)
Q Consensus 313 -~~~~~~~~~L~~---~~g~~~~~~~~g~~ 338 (343)
++.+.+.+.|+. +|++....+.|.++
T Consensus 353 ~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~ 382 (472)
T 3hmu_A 353 NVAAPYLKEKWEALTDHPLVGEAKIVGMMA 382 (472)
T ss_dssp HTHHHHHHHHHHGGGGSTTEEEEEEETTEE
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEecCceE
Confidence 666666655544 45454434444443
No 195
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.91 E-value=1.2e-22 Score=187.28 Aligned_cols=219 Identities=15% Similarity=0.081 Sum_probs=161.3
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH-----hcCceeEEee
Q 019298 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-----FRHIEVRHFD 152 (343)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-----~~g~~~~~~~ 152 (343)
...+|++.++++.. .+++++++++++++.. +..++++||+|+++.|+|......+. ..|.+++.++
T Consensus 68 ~~~~l~~~la~l~g--------~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 138 (400)
T 3nmy_A 68 TRFAYERCVAALEG--------GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD 138 (400)
T ss_dssp HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred HHHHHHHHHHHHhC--------CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence 44678888888872 3467777777999998 56688999999999999986555433 3588888886
Q ss_pred cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~ 232 (343)
.. |++++++++++++++|++++|+||||.+++ +++|+++|++||+++|+|++|+...+.. +. .+
T Consensus 139 ~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~----~~-~~- 202 (400)
T 3nmy_A 139 LT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR----PL-SL- 202 (400)
T ss_dssp TT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC----GG-GG-
T ss_pred CC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC----hh-hc-
Confidence 52 789999999989999999999999999985 7888899999999999999998543221 11 11
Q ss_pred CCCCEEEEccCccccCCCCCcEEE-EEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298 233 STVPILTLGSLSKRWIVPGWRLGW-FVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNF 310 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~G~-i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~ 310 (343)
+..+++.|+||.++.+|.++|+ +++.. ++++.++++..... ....++....++ ...+ ..+..+.++
T Consensus 203 --g~div~~S~sK~l~g~g~~~gG~~vv~~------~~~~~~~l~~~~~~~g~~~~~~~a~~~-l~~l---~~l~~r~~~ 270 (400)
T 3nmy_A 203 --GADLVVHSATKYLNGHSDMVGGIAVVGD------NAELAEQMAFLQNSIGGVQGPFDSFLA-LRGL---KTLPLRMRA 270 (400)
T ss_dssp --TCSEEEEETTTTTTCSSSCCCEEEEECS------CHHHHHHHHHHHHHHCCBCCHHHHHHH-HHHH---TTHHHHHHH
T ss_pred --CCcEEEecCccccCCCCCcceeEEEEeC------CHHHHHHHHHHHHhcCCCCCHHHHHHH-HHhH---hHHHHHHHH
Confidence 3459999999999999988877 44322 24677877766432 345566655554 2222 222236677
Q ss_pred HHHHHHHHHHhhcCCCCce-eeCC
Q 019298 311 LENFAGSCVPSYKLIPELI-NFKS 333 (343)
Q Consensus 311 ~~~~~~~~~~~L~~~~g~~-~~~~ 333 (343)
..++...+.+.|++.|.+. +..|
T Consensus 271 ~~~~a~~l~~~L~~~p~v~~V~~p 294 (400)
T 3nmy_A 271 HCENALALAQWLETHPAIEKVIYP 294 (400)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEECT
T ss_pred HHHHHHHHHHHHHcCCCEeEEECC
Confidence 7888888999999887776 5444
No 196
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.91 E-value=2.3e-23 Score=194.05 Aligned_cols=282 Identities=13% Similarity=0.037 Sum_probs=176.5
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
++.++||+.|.+. +.++ .+|.+.+++.+++.......| ..++++++++++.+.++ .+++|++++|++++
T Consensus 51 g~~~lD~~~~~~~--~~lG~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea 120 (427)
T 3fq8_A 51 GNRYIDYVGTWGP--AICGHAHPEVIEALKVAMEKGTSFGA-----PCALENVLAEMVNDAVP---SIEMVRFVNSGTEA 120 (427)
T ss_dssp SCEEEESSGGGTT--CTTCBTCHHHHHHHHHHHTTCSCCSS-----CCHHHHHHHHHHHHHST---TCSEEEEESSHHHH
T ss_pred CCEEEECCCchhh--hccCCCCHHHHHHHHHHHHhCCCcCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence 7789999998754 2244 689999999999876432223 23566667776666554 57899999999999
Q ss_pred HHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-CceeEEeecCCCCCCC------------CCHHHHHhhhcC---Cc
Q 019298 113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HIEVRHFDLLPDKGWE------------VDLDDIESLADQ---NT 174 (343)
Q Consensus 113 l~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~---~~ 174 (343)
+..+++... ..+++|++.+|+|+++...+... +.....+......++. -|+++|++.+++ ++
T Consensus 121 ~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 200 (427)
T 3fq8_A 121 CMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEI 200 (427)
T ss_dssp HHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTE
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCE
Confidence 999995432 23478999999997654332222 1111100000000000 178999998865 44
Q ss_pred eEEEEeCCCCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCc
Q 019298 175 VALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (343)
Q Consensus 175 ~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r 253 (343)
++++++.++|++|.+.+ .+.+++|.++|++||+++|+||+|.++ ..+.. .....++...+ +.|+||+|+ +|+|
T Consensus 201 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~~-~G~~ 274 (427)
T 3fq8_A 201 AGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG-GVQEKFGVTPD---LTTLGKIIG-GGLP 274 (427)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT-HHHHHTTCCCS---EEEECGGGG-TTSS
T ss_pred EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hhhHhcCCCCC---hhhhhhhhh-CCcc
Confidence 45555444677887765 566999999999999999999999987 44331 11111221112 358899998 7999
Q ss_pred EEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC----C
Q 019298 254 LGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL----I 325 (343)
Q Consensus 254 ~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~----~ 325 (343)
+||++++ +++++.+... ...+++.++++++++ .++|+...+ -+..++++++++.+.+.|++ +
T Consensus 275 ~G~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~~~aa~-~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~ 344 (427)
T 3fq8_A 275 VGAYGGK--------REIMQLVAPAGPMYQAGTLSGNPLAMTAG-IKTLELLRQ-PGTYEYLDQITKRLSDGLLAIAQET 344 (427)
T ss_dssp CEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHH-HHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEc--------HHHHHhhccCCCccccCCCCcCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999884 4677776642 222446688888877 455432111 11455555555555555543 3
Q ss_pred CCceeeCCCCceEeeec
Q 019298 326 PELINFKSTGSSLKYLD 342 (343)
Q Consensus 326 ~g~~~~~~~~g~~~~~~ 342 (343)
++....+..|+++|++
T Consensus 345 -~~~~~~~~~g~~~~~~ 360 (427)
T 3fq8_A 345 -GHAACGGQVSGMFGFF 360 (427)
T ss_dssp -TCCCEEEEETTEEEEE
T ss_pred -CCCeEEEEeeeEEEEE
Confidence 2322233456666654
No 197
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.91 E-value=5.8e-23 Score=193.78 Aligned_cols=263 Identities=14% Similarity=0.073 Sum_probs=184.9
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 112 (343)
..+.|+ +.. ....|.+.+++.+.+. ..+.|.+ ..|..++++++++++.+.+|... .+++++|++++
T Consensus 67 ~~~~lg-~~~-----~~~~p~v~~~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a 135 (474)
T 1wyu_B 67 TFYPLG-SCT-----MKYNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLEPAAGAHG 135 (474)
T ss_dssp SCCCBT-TTC-----CCCCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHH
T ss_pred Cccccc-ccc-----ccCCHHHHHHHHHHHH--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeecChHHHHH
Confidence 456676 431 1234566666655422 2334443 45667888888888877666432 46678999999
Q ss_pred HHHHHHHh----cCCCC-----eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCC
Q 019298 113 IDVAMALL----SRPGA-----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183 (343)
Q Consensus 113 l~~~~~~l----~~~gd-----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~ 183 (343)
+..++.++ .++|| +|+++.|+|+.+...+...|.+++.++++ .++.+|+++|++++++++++|++++|
T Consensus 136 ~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~--~~~~~d~~~L~~~i~~~t~~v~~~~p- 212 (474)
T 1wyu_B 136 ELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGPHVAALMLTNP- 212 (474)
T ss_dssp HHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEEECSS-
T ss_pred HHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC--CCCCcCHHHHHHhhCCCceEEEEECC-
Confidence 98766554 35787 99999999999999999999999999875 35679999999999888999999998
Q ss_pred CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCC-C---CcEEEEEE
Q 019298 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-G---WRLGWFVT 259 (343)
Q Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G---~r~G~i~~ 259 (343)
||||.+. +++++|+++|+++|+++|+|++|..+.++.. ....+ +..+++.|+||+|+.+ | .|+||+++
T Consensus 213 n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~---~~~~~---g~di~~~s~~K~~~~p~g~gG~~~G~~~~ 284 (474)
T 1wyu_B 213 NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMGWA---RPGDM---GFDVVHLNLHKTFTVPHGGGGPGSGPVGV 284 (474)
T ss_dssp CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTTC---CHHHH---TCSEEECCTTTTTCCCCTTSCCCCCCEEE
T ss_pred CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhccCC---CcccC---CCcEEEEeCccccccCCCCCCCCeEEEEE
Confidence 6899873 4689999999999999999999987654311 11222 2458899999999876 4 69999999
Q ss_pred eCCCCCCCchHHHHHHhh-h-------------------hccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHH
Q 019298 260 TDPCGMFRKPKVVERMKK-Y-------------------FDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGS 317 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~-~-------------------~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~ 317 (343)
++ ++++.+.. . .....+.+..++.++ ...+.. ..+.++ ..+++.+++++
T Consensus 285 ~~--------~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa-~~~l~~~g~~~l~~~~~~~~~~~~~ 355 (474)
T 1wyu_B 285 KA--------HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRA-WAYIRTLGLEGLKKAAALAVLNARY 355 (474)
T ss_dssp CG--------GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cH--------HHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 64 34444431 0 001123455556555 344432 123333 68888899999
Q ss_pred HHHhhcCCCCcee
Q 019298 318 CVPSYKLIPELIN 330 (343)
Q Consensus 318 ~~~~L~~~~g~~~ 330 (343)
+.+.|+++ |+.+
T Consensus 356 l~~~L~~~-g~~~ 367 (474)
T 1wyu_B 356 LKELLKEK-GYRV 367 (474)
T ss_dssp HHHHHHHT-TCBC
T ss_pred HHHHHhhc-CcEe
Confidence 99999887 7776
No 198
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.90 E-value=7.2e-23 Score=192.77 Aligned_cols=277 Identities=10% Similarity=0.058 Sum_probs=181.0
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc----C---CCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLS----E---KFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 107 (343)
+.+.|+.+... +.++.+.+++.+++.. + ....|.+ ..-...+++.+++++ +.++++|++|+
T Consensus 67 ~~iyld~~~~g-----~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t~ 135 (465)
T 3e9k_A 67 NAIYFLGNSLG-----LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV------GANEKEIALMN 135 (465)
T ss_dssp BCEECBTTTSC-----CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH------TCCGGGEEECS
T ss_pred CeEEecCCccC-----CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc------CCCcCCEEEEC
Confidence 56677766521 2344555555444421 1 1112222 123466888888887 45789999999
Q ss_pred ChHHHHHHHHHHhcCCCC---eEEEeCCCCcchH----HHHHhcCceeEE--eecC-CCCCCCCCHHHHHhhhc---CCc
Q 019298 108 GCTQAIDVAMALLSRPGA---NILLPRPGFPIYE----LSAAFRHIEVRH--FDLL-PDKGWEVDLDDIESLAD---QNT 174 (343)
Q Consensus 108 g~~~al~~~~~~l~~~gd---~vl~~~p~~~~~~----~~~~~~g~~~~~--~~~~-~~~~~~~d~~~l~~~~~---~~~ 174 (343)
|+++++..+++++.++|+ +|+++.|+|++.. ..++..|.++.. +.+. .++++.+|+++++++++ +++
T Consensus 136 g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~ 215 (465)
T 3e9k_A 136 ALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSI 215 (465)
T ss_dssp CHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGE
T ss_pred CHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCe
Confidence 999999999999987665 4999999998743 356667877532 1111 22456789999999986 578
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 175 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
+++++++|+||||.+++ +++|.++|++||+++|+|++|+... .+..+... +..++++|++|.+.+...++
T Consensus 216 ~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~----~~~~~~~~---~~D~~~~s~~K~l~~gp~~~ 285 (465)
T 3e9k_A 216 AVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGN----VELYLHDW---GVDFACWCSYKYLNAGAGGI 285 (465)
T ss_dssp EEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTT----SCCCHHHH---TCCEEEECSSSTTCCCTTCC
T ss_pred EEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCC----cCCchhhc---CCCEEEECcccccccCCCce
Confidence 89999999999999977 5778888999999999999998522 11122222 23489999999984333368
Q ss_pred EEEEEeCCCCCCCchHHHHHHhhhh-------------------------c-cccCcchHHHHHHHhccchhhHHH-H-H
Q 019298 255 GWFVTTDPCGMFRKPKVVERMKKYF-------------------------D-ILGDPATFIQVCIMYGCLSTIMQI-M-I 306 (343)
Q Consensus 255 G~i~~~~~~~~~~~~~~~~~l~~~~-------------------------~-~~~~~~~~~~~a~~~~~l~~~~~~-l-~ 306 (343)
|+++++. ++++.+.... . ..++++.....++ .+++....++ + +
T Consensus 286 g~l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~-~aal~~~~~~~~~~ 356 (465)
T 3e9k_A 286 AGAFIHE--------KHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSL-HASLEIFKQATMKA 356 (465)
T ss_dssp CEEEECG--------GGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHH-HHHHHHHHHHCHHH
T ss_pred EEEEEcH--------HHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHH-HHHHHHHHHcCHHH
Confidence 9988854 2222221100 0 0124444444444 4444432332 2 3
Q ss_pred HHHHHHHHHHHHHHhhcCC----------CCceeeCCC----CceEeeec
Q 019298 307 HGNFLENFAGSCVPSYKLI----------PELINFKST----GSSLKYLD 342 (343)
Q Consensus 307 ~~~~~~~~~~~~~~~L~~~----------~g~~~~~~~----~g~~~~~~ 342 (343)
.+++++++++++.+.|+++ +|+.+..|. .|.++|++
T Consensus 357 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~ 406 (465)
T 3e9k_A 357 LRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTIT 406 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEE
Confidence 7888888999999988874 688876765 36677664
No 199
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.90 E-value=7.6e-23 Score=189.74 Aligned_cols=269 Identities=15% Similarity=0.076 Sum_probs=165.8
Q ss_pred CcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCe
Q 019298 53 TTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN 126 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~ 126 (343)
.+|.+.+++.+++.+....+|+ .....+.+++...+++.+.++ +++++|++++| ++++..++++++++||+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~~gd~ 118 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQPGDT 118 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCCTTCE
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcCCCCE
Confidence 5899999999887543211222 222334444433344443333 45566666666 78999999999999999
Q ss_pred EEEeCCCCcchH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 019298 127 ILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETA 202 (343)
Q Consensus 127 vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 202 (343)
|+++.|+|..+. ......|..+..+++..+.++.+|+++|++++++ +++++++++|+||+ .. ++++|.++|
T Consensus 119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~---~l~~l~~l~ 193 (420)
T 3gbx_A 119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VV---DWAKMREIA 193 (420)
T ss_dssp EEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CC---CHHHHHHHH
T ss_pred EEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccCC--cc---CHHHHHHHH
Confidence 999999997733 2222333333333332235567999999999876 58999998999974 43 378999999
Q ss_pred hhcCcEEEEccCCCcc-ccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc
Q 019298 203 NKLKTLVIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI 281 (343)
Q Consensus 203 ~~~~~~~i~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~ 281 (343)
++||+++|+||+|... .+.+..+..+. ...++++|+||+++ |.+.||+++++.. .++.+.+......
T Consensus 194 ~~~~~~li~De~~~~~~~~~~~~~~~~~-----~~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~~~~ 261 (420)
T 3gbx_A 194 DSIGAYLFVDMAHVAGLIAAGVYPNPVP-----HAHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSAVFP 261 (420)
T ss_dssp HHTTCEEEEECTTTHHHHHTTSSCCSTT-----TSSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHHHC-
T ss_pred HHcCCEEEEECCcchhceecccCCcccc-----cCCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhhcCC
Confidence 9999999999998643 32322111111 13489999999975 5556999985310 2466666554321
Q ss_pred --ccCcchHHHHHHHhccch-hh-HHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC-CCceEeeecC
Q 019298 282 --LGDPATFIQVCIMYGCLS-TI-MQIMIHGNFLENFAGSCVPSYKLIPELINFKS-TGSSLKYLDL 343 (343)
Q Consensus 282 --~~~~~~~~~~a~~~~~l~-~~-~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~-~~g~~~~~~l 343 (343)
...++...+.++ ..++. .. ..+-+.+++++++++.+.+.|.+. |+.+..+ ..++++|+++
T Consensus 262 ~~~~~~~~~~~~a~-~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 326 (420)
T 3gbx_A 262 SAQGGPLMHVIAGK-AVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDL 326 (420)
T ss_dssp ---CCCCHHHHHHH-HHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEC
T ss_pred CCCCCcchhHHHHH-HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEc
Confidence 223334434443 22222 11 233347888999999999999885 7886443 6778888753
No 200
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.90 E-value=1e-22 Score=190.66 Aligned_cols=276 Identities=13% Similarity=0.061 Sum_probs=180.8
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CCCHHHH--HHHH-HHHhhhCCCCCCCCcEEE-ecC
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT---AGLPLTR--RAIA-EYLSRDLPYKLTPNDVFV-TSG 108 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g~~~lr--~~ia-~~~~~~~~~~~~~~~i~~-~~g 108 (343)
+.|+|..+. ...+|.+++++.+++.+....+|+.. .|...++ +.++ +++.+.+|. +.+.+ ++|
T Consensus 46 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~----~~~~v~~~s 115 (447)
T 3h7f_A 46 DTLEMIASE------NFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGA----EFANVQPHS 115 (447)
T ss_dssp HSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC----SEEECCCSS
T ss_pred CceeEecCC------CCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCC----CceEEEeCC
Confidence 568885543 23489999999887754322234331 2444444 4444 555443332 23444 778
Q ss_pred hHHHHHHHHHHhcCCCCeEEEeCCCCcch-HHH--HHh--cCceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCC
Q 019298 109 CTQAIDVAMALLSRPGANILLPRPGFPIY-ELS--AAF--RHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINP 182 (343)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~-~~~--~~~--~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p 182 (343)
+++++..++.+++++||+|++++|+|..+ ... ... .+..+..+++++ +++.+|+++++++++ .+++++++++|
T Consensus 116 Gs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~i~~~~~ 194 (447)
T 3h7f_A 116 GAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPKVIIAGWS 194 (447)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCSEEEEECS
T ss_pred HHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCeEEEEcCC
Confidence 89999999999999999999999999772 111 112 234555555543 346799999999885 47888888899
Q ss_pred CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
+||++. ++++|.++|+++|+++|+|++|. ++.+.+..+..+ . ...+++.|+||++ +|+|.||++++.
T Consensus 195 ~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~---~--~~di~~~s~sK~l--~G~~gG~i~~~~ 262 (447)
T 3h7f_A 195 AYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV---P--HADVVSTTVHKTL--GGGRSGLIVGKQ 262 (447)
T ss_dssp SCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST---T--TCSEEEEESSGGG--CCCSCEEEEECG
T ss_pred CCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC---C--CCcEEEecCCcCC--CCCCeEEEEECH
Confidence 999886 57899999999999999999975 344443322222 1 1128899999996 478999999853
Q ss_pred CCCCCCchHHHHHHhhhhc-c-ccCcchHHHHHHHhccchh-hH-HHHHHHHHHHHHHHHHHHhhcCC----CCceee-C
Q 019298 262 PCGMFRKPKVVERMKKYFD-I-LGDPATFIQVCIMYGCLST-IM-QIMIHGNFLENFAGSCVPSYKLI----PELINF-K 332 (343)
Q Consensus 262 ~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~~~a~~~~~l~~-~~-~~l~~~~~~~~~~~~~~~~L~~~----~g~~~~-~ 332 (343)
++++.+..... . .++++.....++ ..++.. .. .+-+.++++.++++.+.+.|.+. +|+.+. .
T Consensus 263 --------~~~~~l~~~~~~~~~~~~~~~~~~a~-~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~ 333 (447)
T 3h7f_A 263 --------QYAKAINSAVFPGQQGGPLMHVIAGK-AVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSG 333 (447)
T ss_dssp --------GGHHHHHHHHTTTTCSSCCHHHHHHH-HHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGG
T ss_pred --------HHHHHHhhhcCCcccCCccHHHHHHH-HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecC
Confidence 56777765532 1 223333333333 222322 12 33348888999999999999876 577753 3
Q ss_pred CCCceEeeecC
Q 019298 333 STGSSLKYLDL 343 (343)
Q Consensus 333 ~~~g~~~~~~l 343 (343)
+.+++++|+++
T Consensus 334 ~~~~~~~~~~~ 344 (447)
T 3h7f_A 334 GTDVHLVLVDL 344 (447)
T ss_dssp SCSSSEEEEEC
T ss_pred CCCCCEEEEEc
Confidence 46778888753
No 201
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.90 E-value=2.7e-22 Score=183.68 Aligned_cols=243 Identities=15% Similarity=0.160 Sum_probs=173.8
Q ss_pred CCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH-HHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeE
Q 019298 50 CFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAI-AEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANI 127 (343)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i-a~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~v 127 (343)
.+++++.+.+++.+.+..+.+..|++ ...+|++++ +++++ ..+++++++|+++++..++.++ +++||+|
T Consensus 11 ~~~~~~~i~~a~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~~~Gd~V 81 (377)
T 3ju7_A 11 STVPVIEYLDELKEIDASHIYTNYGP--INQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKRKKGKYA 81 (377)
T ss_dssp CCCCGGGGHHHHHHHHHHTCCSSSCH--HHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSCTTCCEE
T ss_pred CCCCcHHHHHHHHHHHHcCCcccCCH--HHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEE
Confidence 37888999999999987654322333 468999999 99982 2578999999999999999998 8999999
Q ss_pred EEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh-cCC--ceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQN--TVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 128 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-~~~--~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
+++.|+|..+...+...|.+++.+++++ +++.+|++++++++ +++ +++|+ |+||+|...+ +++|.++|+
T Consensus 82 i~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~- 153 (377)
T 3ju7_A 82 LMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK- 153 (377)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH-
T ss_pred EECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh-
Confidence 9999999999999999999999998864 46789999999988 555 77766 7889999865 677788888
Q ss_pred cCcEEEEccCCCcccc-CCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc
Q 019298 205 LKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI 281 (343)
Q Consensus 205 ~~~~~i~D~ay~~~~~-~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~ 281 (343)
+|+++|+|++|+.... .+.... ..+. .+.+.|| +|.++. | +.|++++++ +++.++++.....
T Consensus 154 ~~~~vi~D~a~a~g~~~~~~~~g--~~~~----d~~~~S~~~~K~l~~-g-~gG~~~~~~-------~~l~~~~~~~~~~ 218 (377)
T 3ju7_A 154 KGVPVVVDAAPGFGLMNGGMHYG--QDFS----GMIIYSFHATKPFGI-G-EGGLIYSKN-------EEDIQRIKRMGNF 218 (377)
T ss_dssp TTCCBEEECTTCTTCEETTEETT--TTCS----SEEEEECBTTSSSCC-B-SCEEEEESC-------HHHHHHHHHHTBT
T ss_pred cCCEEEEECCCccCCeECCEecc--CCCC----cEEEEECCCCCcCCC-C-CcEEEEECC-------HHHHHHHHHHHhc
Confidence 9999999999986432 211110 1111 1555555 688775 5 578887754 5677777765431
Q ss_pred -------------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 019298 282 -------------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPEL 328 (343)
Q Consensus 282 -------------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~ 328 (343)
....+.+..+++ ...+.. +-+..++.+++++.+.+.|..++++
T Consensus 219 g~~~~~~~~~~g~~~~~~~~~aa~~-~~~l~~---l~~~~~~~~~~~~~~~~~L~~~~~~ 274 (377)
T 3ju7_A 219 GFDTNRECTMMGFNCKMSEYAAAIG-IATMKK---WDDKLKERTRISEWYKQLLQSNGLM 274 (377)
T ss_dssp TBCTTSCBCSSCCBCCCCHHHHHHH-HHHHHT---HHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred CCCCCCceeeccccCCCCHHHHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 223444544433 333322 2225556666666777777777554
No 202
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.90 E-value=5e-22 Score=184.46 Aligned_cols=225 Identities=16% Similarity=0.113 Sum_probs=159.3
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeC-CCCcchHHHH----------HhcCceeEEe
Q 019298 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR-PGFPIYELSA----------AFRHIEVRHF 151 (343)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~-p~~~~~~~~~----------~~~g~~~~~~ 151 (343)
++++.+.+.+.+|......+++++ |+++++..++.+++++||+|++++ |.|..+...+ +..|.+++.+
T Consensus 67 ~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v 145 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAV 145 (431)
T ss_dssp HHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEEC
T ss_pred HHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEe
Confidence 444555444444432222233345 668999999999999999999998 9999887655 3468899888
Q ss_pred ecCCCCCCCCCHHHHHhhhcCCceEEEEe-CCCCCcccccCHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCcc
Q 019298 152 DLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPM 228 (343)
Q Consensus 152 ~~~~~~~~~~d~~~l~~~~~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~ 228 (343)
+.+. ++.+|++++++++++++++|+++ +||||+|...+.+++++|+++|++ +|+++|+|++|+.+.++....
T Consensus 146 ~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~--- 220 (431)
T 3ht4_A 146 PLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC--- 220 (431)
T ss_dssp CBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG---
T ss_pred CCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc---
Confidence 8764 46799999999999899999999 589999999999999999999999 999999999999987543311
Q ss_pred cccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc---c--cCcchHHHHHHHhccchhhH
Q 019298 229 GVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI---L--GDPATFIQVCIMYGCLSTIM 302 (343)
Q Consensus 229 ~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~---~--~~~~~~~~~a~~~~~l~~~~ 302 (343)
.+ +..++++|+||.++. .+...||++++ ++++++++..... . ..++.....++ ...+ .
T Consensus 221 -~~---g~Di~~~S~sK~lgg~~~~~GG~v~~~--------~~li~~l~~~~~~~~~g~~~~~~~~~~~~~-~~~l---~ 284 (431)
T 3ht4_A 221 -HV---GADLMAGSLIKNPGGGIVKTGGYIVGK--------EQYVEACAYRLTSPGIGAEAGASLYSLQEM-YQGF---F 284 (431)
T ss_dssp -GT---TCSEEEEETTSGGGTTTCSSCEEEEEC--------HHHHHHHHHHHSCTTTTTSCSCCCSCSHHH-HHHH---H
T ss_pred -cc---CCeEEEcCccccCCCCCCCceEEEEec--------HHHHHHHHHHhccCCcccccCccHHHHHHH-HhHh---h
Confidence 11 223999999999665 23444999884 4788888764321 1 11111111222 1111 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 303 QIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 303 ~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
..-.++++..++...+.+.|+++ |+.+
T Consensus 285 ~~~~~~~~~~~~a~~l~~~L~~~-g~~v 311 (431)
T 3ht4_A 285 LAPHVAGQALKGAIFTAAFLEKL-GMNT 311 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-TCCE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhC-cCEe
Confidence 22236677788888888888887 5555
No 203
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.90 E-value=2.1e-21 Score=184.52 Aligned_cols=266 Identities=9% Similarity=0.020 Sum_probs=191.8
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC-------------
Q 019298 56 VATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR------------- 122 (343)
Q Consensus 56 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~------------- 122 (343)
.+.+.+..++... ...|....+..++++.+++|+.+.+|.+.+++.+++|+|+++++..++.++.+
T Consensus 111 ~~~e~l~~~~~~~-~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~ 189 (511)
T 3vp6_A 111 LAGEWLTSTANTN-MFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAA 189 (511)
T ss_dssp HHHHHHHHHHCCC-SSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGG
T ss_pred HHHHHHHHHhccC-CCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCccc
Confidence 3455666666543 34787777888999999999999888776678999999999999988877654
Q ss_pred -CCCeEEEeCCCCcchHHHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhcCC------ceEEEEeCCCCCcccccCH
Q 019298 123 -PGANILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 123 -~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~nptG~~~~~ 192 (343)
+++.|+++.++|..+...++..|. +++.++.+ .++.+|+++|++++++. +++++++.|+||||.+
T Consensus 190 ~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v--- 264 (511)
T 3vp6_A 190 VPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF--- 264 (511)
T ss_dssp SCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB---
T ss_pred CCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc---
Confidence 567899999999999999999998 78888775 45789999999998754 7889999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC-cccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 271 (343)
+++++|+++|++||+++++|++|+.......... .+... ..-.+++.+++|.++.+ ..+|+++++++ .+
T Consensus 265 d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~--~~aDsv~~~~hK~l~~p-~g~g~l~~~~~-------~~ 334 (511)
T 3vp6_A 265 DPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGI--ERANSVTWNPHKMMGVL-LQCSAILVKEK-------GI 334 (511)
T ss_dssp CCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTG--GGCSEEEECTTSTTCCC-SCCEEEEESST-------TH
T ss_pred ccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCC--ccCCEEEECcccccCCC-cCeEEEEEeCH-------HH
Confidence 7789999999999999999999998654322111 11111 11237778999998765 66899888653 24
Q ss_pred HHHHhhhh-cc-c-------------------c-CcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCc
Q 019298 272 VERMKKYF-DI-L-------------------G-DPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPEL 328 (343)
Q Consensus 272 ~~~l~~~~-~~-~-------------------~-~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~ 328 (343)
.+...... .. . + ....+...++ ..++. .++++ ++++..++.+++.+.|+++||+
T Consensus 335 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~a-l~~~g--~~gl~~~~~~~~~~a~~l~~~L~~~pg~ 411 (511)
T 3vp6_A 335 LQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLM-WKAKG--TVGFENQINKCLELAEYLYAKIKNREEF 411 (511)
T ss_dssp HHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHHSCTTE
T ss_pred HHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHH-HHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 44332110 00 0 0 0112222222 12221 33444 8888899999999999999999
Q ss_pred eeeC---CCCceEee
Q 019298 329 INFK---STGSSLKY 340 (343)
Q Consensus 329 ~~~~---~~~g~~~~ 340 (343)
++.. |+.++..|
T Consensus 412 ~l~~~~~p~~~~v~f 426 (511)
T 3vp6_A 412 EMVFNGEPEHTNVCF 426 (511)
T ss_dssp EESSSSCCSSSCEEE
T ss_pred EEEecCCCCeEEEEE
Confidence 9654 55665444
No 204
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.90 E-value=2.9e-21 Score=183.55 Aligned_cols=264 Identities=9% Similarity=0.008 Sum_probs=186.7
Q ss_pred HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC--------CC-----C
Q 019298 59 EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--------PG-----A 125 (343)
Q Consensus 59 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~--------~g-----d 125 (343)
+.+...+.. ....|....+..++++.+.+++.+.+|.+.+++++++|+|+++++..++.++.. +| +
T Consensus 111 ~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~ 189 (504)
T 2okj_A 111 EWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK 189 (504)
T ss_dssp HHHHHHHCC-BSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCC
T ss_pred HHHHHhhcc-CCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCC
Confidence 444444333 334566555667788888888887777654478999999999999999988752 56 6
Q ss_pred -eEEEeCCCCcchHHHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHH
Q 019298 126 -NILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHL 195 (343)
Q Consensus 126 -~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l 195 (343)
.|+++.++|..+...+...|. +++.++++ .++.+|+++|++++++ .+++|++++|+||||.+ +++
T Consensus 190 ~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i---~~l 264 (504)
T 2okj_A 190 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF---DPI 264 (504)
T ss_dssp EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB---CCH
T ss_pred eEEEECCcchHHHHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc---CCH
Confidence 799999999999999988877 78888775 4578999999998865 47888999999999999 568
Q ss_pred HHHHHHHhhcCcEEEEccCCCccccCCCCC-CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298 196 QKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (343)
Q Consensus 196 ~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 274 (343)
++|+++|+++|+++++|++|+.+.+..... ..+.... ...+++.|++|.++.+ .++|++++.++ ++.+.
T Consensus 265 ~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~--~~D~i~~~~hK~~~~p-~~~g~l~~~~~-------~~~~~ 334 (504)
T 2okj_A 265 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEK-------GILQG 334 (504)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESST-------THHHH
T ss_pred HHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcc--cCCEEEECchhhcCCC-cceEEEEEECH-------HHHHH
Confidence 889999999999999999999876543222 1111111 2237788999997766 68999999653 24443
Q ss_pred Hh-hhhccc-c--------------------CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298 275 MK-KYFDIL-G--------------------DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK 332 (343)
Q Consensus 275 l~-~~~~~~-~--------------------~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~ 332 (343)
.. ...... . ....+.+.++ ..++.. ..+.+..++..++++++.+.|+++||+++..
T Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~-l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 412 (504)
T 2okj_A 335 CNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLM-WKAKGT-VGFENQINKCLELAEYLYAKIKNREEFEMVF 412 (504)
T ss_dssp HHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCTTEEESS
T ss_pred HhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHH-HHHhhH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 21 111100 0 0123444444 233321 2333478888899999999999988999654
Q ss_pred ---CCCceEee
Q 019298 333 ---STGSSLKY 340 (343)
Q Consensus 333 ---~~~g~~~~ 340 (343)
|+.+++.|
T Consensus 413 ~~~p~~~~v~f 423 (504)
T 2okj_A 413 NGEPEHTNVCF 423 (504)
T ss_dssp SSCCSSSCEEE
T ss_pred cCCCCeEEEEE
Confidence 77777765
No 205
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.90 E-value=4.6e-22 Score=188.74 Aligned_cols=304 Identities=12% Similarity=0.016 Sum_probs=203.0
Q ss_pred cccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhh
Q 019298 14 IITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93 (343)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~ 93 (343)
..+.......+.+.... ++++.+++..-. ...+++.+.+++.+++.... ..|....+..++++.+.+++.+.
T Consensus 36 ~~~~~~~~~~~~~~i~l--~gnp~~~l~s~~-----t~~~~~~v~~~l~~~~~~~~-~~~~~~p~~~~le~~~~~~la~l 107 (502)
T 3hbx_A 36 SIPKEAAYQIINDELML--DGNPRLNLASFV-----TTWMEPECDKLIMSSINKNY-VDMDEYPVTTELQNRCVNMIAHL 107 (502)
T ss_dssp CCCHHHHHHHHHHHGGG--SCCGGGBTTCCS-----CCCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcc--CCCCCceecccc-----CCCCCHHHHHHHHHHhccCC-CChhcChhHHHHHHHHHHHHHHH
Confidence 44555665555554432 133444443311 13467889999888876532 23444445678888888888888
Q ss_pred CCCCCCCCcEE---EecChHHHHHHHHHHhcCC--------CC-----eEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298 94 LPYKLTPNDVF---VTSGCTQAIDVAMALLSRP--------GA-----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157 (343)
Q Consensus 94 ~~~~~~~~~i~---~~~g~~~al~~~~~~l~~~--------gd-----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 157 (343)
+|.+..+++++ +|+|+++++..++.++..+ |+ .|+++.++|..+...++..|++++.+++++ +
T Consensus 108 ~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~ 186 (502)
T 3hbx_A 108 FNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-G 186 (502)
T ss_dssp TTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-T
T ss_pred hCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-C
Confidence 88765455554 5899999999998887654 76 999999999999999999999999998754 4
Q ss_pred CCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc------CcEEEEccCCCcccc---CCCCCCcc
Q 019298 158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL------KTLVIADEVYGHLVF---GDKPFVPM 228 (343)
Q Consensus 158 ~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~------~~~~i~D~ay~~~~~---~~~~~~~~ 228 (343)
++.+|+++|++++++++++|++++|+||||.+ +++++|.++|+++ |+++++|++|+++.. .+.....+
T Consensus 187 ~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~---~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~ 263 (502)
T 3hbx_A 187 YYVMDPQQAVDMVDENTICVAAILGSTLNGEF---EDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF 263 (502)
T ss_dssp BCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCB---CCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST
T ss_pred cCcCCHHHHHHHHhhCCEEEEEecCCCCCCcc---cCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccccc
Confidence 47899999999999899999999999999999 4567778888888 999999999997642 22111111
Q ss_pred cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc----------ccCc---chHHHHHHHh
Q 019298 229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI----------LGDP---ATFIQVCIMY 295 (343)
Q Consensus 229 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~---~~~~~~a~~~ 295 (343)
...+-..+..|.+|. +..+.++||+++.++..+ .+.+...... ..+. ....+.++ .
T Consensus 264 ---~~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~~l------~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~a-l 332 (502)
T 3hbx_A 264 ---RLPLVKSINVSGHKY-GLVYAGIGWVIWRNKEDL------PEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ-L 332 (502)
T ss_dssp ---TSTTEEEEEEETTTT-TCCCSSCEEEEESSGGGS------CGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHH-H
T ss_pred ---CCCCceEEEECcccc-cCCCCCeEEEEEeCHHHh------hHHhccCcccccCCCCCccccCCchHHHHHHHHHH-H
Confidence 111224777888998 566778999988653311 1111100000 0111 12223222 1
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC-CCceEeee
Q 019298 296 GCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS-TGSSLKYL 341 (343)
Q Consensus 296 ~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~-~~g~~~~~ 341 (343)
..+. ...+.+.+++..++++++.+.|++++++.+..+ ....++.+
T Consensus 333 ~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (502)
T 3hbx_A 333 IRLG-HEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAF 378 (502)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEE
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEE
Confidence 1111 133444788888888999999999978986555 34444443
No 206
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.89 E-value=3.6e-22 Score=184.35 Aligned_cols=272 Identities=13% Similarity=0.104 Sum_probs=177.5
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC------CCCCHHHH----HHHHHHHhhhCCCCCCCCcE
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP------TAGLPLTR----RAIAEYLSRDLPYKLTPNDV 103 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr----~~ia~~~~~~~~~~~~~~~i 103 (343)
+..+++++.+. +.++.+.+++.+++.+.....|+. .....+++ +.+++++ | .+++.+
T Consensus 23 ~~~~~~~~~~~-------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~----g--~~~~~i 89 (405)
T 2vi8_A 23 HAKIELIASEN-------FVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF----G--AEHANV 89 (405)
T ss_dssp HHSEECCTTCC-------CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----T--CSEEEC
T ss_pred hcceeeccCcc-------cCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCceEE
Confidence 34556665443 128999999988875321112221 11233455 4666666 2 334444
Q ss_pred EEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH-H--HHhcCc--eeEEeecCCCCCCCCCHHHHHhhhcC-CceEE
Q 019298 104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL-S--AAFRHI--EVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL 177 (343)
Q Consensus 104 ~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~-~--~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i 177 (343)
++++| ++++..+++++.++||+|+++.|+|+.+.. . +...|. +++.+++++ +++.+|++++++.+++ +++++
T Consensus 90 ~~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v 167 (405)
T 2vi8_A 90 QPHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLI 167 (405)
T ss_dssp CCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEE
T ss_pred EecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEE
Confidence 45565 999999999999999999999999987743 1 123333 666666543 4567999999999875 77777
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcccc-CCCCCCcccccCCCCCEEEEccCccccC-CCCCcEE
Q 019298 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLG 255 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G 255 (343)
++ +|+|. |.. .++++|.++|++||+++|+|++|..... .+..... +. ...++++|+||+|+ +.| |
T Consensus 168 ~~-~~~~~-~~~---~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~~--~~di~~~s~sK~~~g~~g---G 234 (405)
T 2vi8_A 168 VA-AAAAY-PRI---IDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP---VP--YAHFVTTTTHKTLRGPRG---G 234 (405)
T ss_dssp EE-CCSSC-CSC---CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS---TT--TCSEEEEESSSTTCCCSC---E
T ss_pred EE-eCCCC-Ccc---CCHHHHHHHHHHcCCEEEEEccccccccccCcCCCc---cc--cCCEEEEeccccCCCCCC---e
Confidence 66 55553 343 2478999999999999999999995332 2221111 11 12288999999987 566 9
Q ss_pred EEEEeCCCCCCCchHHHHHHhhhhc-cccC-cchHHHHHHHhccchhh-HHHHH-HHHHHHHHHHHHHHhhcCCCCceee
Q 019298 256 WFVTTDPCGMFRKPKVVERMKKYFD-ILGD-PATFIQVCIMYGCLSTI-MQIMI-HGNFLENFAGSCVPSYKLIPELINF 331 (343)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~-~~~~~~~a~~~~~l~~~-~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~ 331 (343)
|++++ +++++.++.... ...+ +++....++ .+++... ..+++ .+++++++++.+.+.|+++ |+.+.
T Consensus 235 ~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~aa~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 304 (405)
T 2vi8_A 235 MILCQ--------EQFAKQIDKAIFPGIQGGPLMHVIAAK-AVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLV 304 (405)
T ss_dssp EEEEC--------HHHHHHHHHHHTTTTCSSCCHHHHHHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEG
T ss_pred EEEEc--------HHHHHHHHhhhcccccCCCCHHHHHHH-HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEe
Confidence 99984 367777776542 2222 234433333 4444432 13444 8889999999999999988 88865
Q ss_pred CC-CCceEeeecC
Q 019298 332 KS-TGSSLKYLDL 343 (343)
Q Consensus 332 ~~-~~g~~~~~~l 343 (343)
.| .+++++|+++
T Consensus 305 ~~~~~~~~~~~~~ 317 (405)
T 2vi8_A 305 SGGTDNHLLLVDL 317 (405)
T ss_dssp GGSCSSSEEEEEC
T ss_pred cCCCCceEEEEEc
Confidence 55 4688888864
No 207
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.89 E-value=2e-21 Score=181.50 Aligned_cols=183 Identities=20% Similarity=0.178 Sum_probs=145.9
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh---------cCC
Q 019298 53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---------SRP 123 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l---------~~~ 123 (343)
..+++.+++.+++... .|.+..+..++|++++++++ .+++++++|+++++..+++++ .++
T Consensus 41 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~g--------~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~ 109 (437)
T 3bb8_A 41 IGTKELQLMVEASLDG---WLTTGRFNDAFEKKLGEYLG--------VPYVLTTTSGSSANLLALTALTSPKLGVRALKP 109 (437)
T ss_dssp CCHHHHHHHHHHHHHC---CCBSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCT
T ss_pred CCHHHHHHHHHHHHcC---CcCCChHHHHHHHHHHHHHC--------CCcEEEeCCHHHHHHHHHHHhhhcccccccCCC
Confidence 3578888888887642 35555678999999999993 236788888889999999998 789
Q ss_pred CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeC-CCCCcccccCHHHHHHHHHHH
Q 019298 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETA 202 (343)
Q Consensus 124 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~-p~nptG~~~~~~~l~~l~~~~ 202 (343)
||+|+++.|+|..+...+...|.+++.+++++ +++.+|++++++++++++++|++++ ++|| .++++|.++|
T Consensus 110 gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~g~~-------~~~~~i~~l~ 181 (437)
T 3bb8_A 110 GDEVITVAAGFPTTVNPTIQNGLIPVFVDVDI-PTYNVNASLIEAAVSDKTKAIMIAHTLGNL-------FDLAEVRRVA 181 (437)
T ss_dssp TCEEEECSSSCHHHHHHHHHTTCEEEECCEET-TTTEECGGGHHHHCCTTEEEEEEECGGGCC-------CCHHHHHHHH
T ss_pred cCEEEECCCCcHHHHHHHHHcCCEEEEEeccC-ccCCcCHHHHHHhcCCCCeEEEEeCCCCCh-------hcHHHHHHHH
Confidence 99999999999999999999999999998764 3577999999999988889988874 4555 4678889999
Q ss_pred hhcCcEEEEccCCCccc-cCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 203 NKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 203 ~~~~~~~i~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
+++|+++|+|++|.... +++. ....+. .+++.||+|+++++|.+.|++++++
T Consensus 182 ~~~~~~li~D~a~~~g~~~~~~---~~~~~~----d~~~~s~~~~k~l~~g~gg~~~~~~ 234 (437)
T 3bb8_A 182 DKYNLWLIEDCCDALGSTYDGK---MAGTFG----DIGTVSFYPAKHITMGEGGAVFTQS 234 (437)
T ss_dssp HHHTCEEEEECTTCTTCEETTE---ETTSSS----SEEEEECSTTSSSCCSSCEEEEESC
T ss_pred HHcCCEEEEECccccCceECCe---eccccc----CEEEEECcCCcCCCCCCeEEEEeCC
Confidence 99999999999998532 2111 111111 2778899999889999999999853
No 208
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.89 E-value=2.1e-22 Score=188.63 Aligned_cols=280 Identities=11% Similarity=0.043 Sum_probs=176.3
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHH-H-HHHH---HHhcCCCCCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEE
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVAT-E-AVAE---ALLSEKFNGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVF 104 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~-~-~~~~---~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~ 104 (343)
++.++||+.+... ..++ .+|.+. + ++.+ ++.... .|.+ .....++++.+++++ + ...+++|+
T Consensus 53 g~~ylD~~~~~~~--~~lG~~~p~v~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~~la~~la~~~----~-~~~~~~v~ 123 (449)
T 2cjg_A 53 GRRYLDMFTFVAS--SALGMNPPALVDDREFHAELMQAALNK--PSNSDVYSVAMARFVETFARVL----G-DPALPHLF 123 (449)
T ss_dssp CCEEEESSHHHHT--CSSCBSCHHHHTCHHHHHHHHHHHTCC--CCTTTCCCHHHHHHHHHHHHHH----C-CTTCCEEE
T ss_pred CcEEEEccCCccc--cCCCCCCHHHHHHHHHHHHHHHHHhcC--CCCcccCCHHHHHHHHHHHHhc----C-CCCCCEEE
Confidence 5678898777643 2244 489999 8 9998 766532 2321 112244555555555 2 24678999
Q ss_pred EecChHHHHHHHHHHhc---C----------C-CCeEEEeCCCCcchHHHHHhc-C--------c-----eeEEeecCCC
Q 019298 105 VTSGCTQAIDVAMALLS---R----------P-GANILLPRPGFPIYELSAAFR-H--------I-----EVRHFDLLPD 156 (343)
Q Consensus 105 ~~~g~~~al~~~~~~l~---~----------~-gd~vl~~~p~~~~~~~~~~~~-g--------~-----~~~~~~~~~~ 156 (343)
+++|+++++..+++.+. . + ||+|++.+|+|+++...+... + . ++..++....
T Consensus 124 ~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 203 (449)
T 2cjg_A 124 FVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRP 203 (449)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCT
T ss_pred EeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCc
Confidence 99999999999987643 2 2 899999999998765432222 1 1 3444443210
Q ss_pred CCC--------CCCHHHHHhhhc---CCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC
Q 019298 157 KGW--------EVDLDDIESLAD---QNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK 223 (343)
Q Consensus 157 ~~~--------~~d~~~l~~~~~---~~~~~i~~~~p-~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~ 223 (343)
... ..++++|++.++ +++++ ++++| +||+| ..++.+++++|.++|++||+++|+||+|.++.+.+.
T Consensus 204 ~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~ 282 (449)
T 2cjg_A 204 GLDEPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT 282 (449)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHSTTTEEE-EEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred hhhccccchhhHHHHHHHHHHHHhcCCceEE-EEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc
Confidence 011 135566888875 34445 55666 68999 589999999999999999999999999998766554
Q ss_pred CCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh-----hh-hccccCcchHHHHHHHhcc
Q 019298 224 PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK-----KY-FDILGDPATFIQVCIMYGC 297 (343)
Q Consensus 224 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~-----~~-~~~~~~~~~~~~~a~~~~~ 297 (343)
. .....++...++ .|+||.| |+||+++++ ++++.+. .. ...+++.+++++.++ .++
T Consensus 283 ~-~~~~~~~~~~di---~t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa-~aa 344 (449)
T 2cjg_A 283 A-WAYQQLDVAPDI---VAFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRA-RRI 344 (449)
T ss_dssp S-STHHHHTCCCSE---EEECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHH-HHH
T ss_pred c-eeecccCCCceE---EEecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHH-HHH
Confidence 2 122222222233 3789997 799999864 4544321 11 223556788888887 555
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhcC----CCC-ceeeCCCCceEeeecC
Q 019298 298 LSTIMQIMIHGNFLENFAGSCVPSYKL----IPE-LINFKSTGSSLKYLDL 343 (343)
Q Consensus 298 l~~~~~~l~~~~~~~~~~~~~~~~L~~----~~g-~~~~~~~~g~~~~~~l 343 (343)
|+...+ -+..++++++++.+.+.|++ +|+ +....+. |.|+++++
T Consensus 345 l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~-g~~~~~~~ 393 (449)
T 2cjg_A 345 LEVIEA-EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGR-GLMCAFSL 393 (449)
T ss_dssp HHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEE-TTEEEEEC
T ss_pred HHHHHh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeec-cEEEEEEE
Confidence 543211 12567777788888877764 454 5443444 44555553
No 209
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.88 E-value=3.3e-21 Score=179.01 Aligned_cols=157 Identities=20% Similarity=0.165 Sum_probs=127.9
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEe-ec
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHF-DL 153 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~-~~ 153 (343)
..++++.++++++. +..++++++++++..++++++++||+|+++.++|..+...+ ...|.+++.+ +.
T Consensus 60 ~~~l~~~la~~~g~--------~~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 131 (421)
T 2ctz_A 60 VDVLEKRLAALEGG--------KAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE 131 (421)
T ss_dssp HHHHHHHHHHHHTC--------SEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT
T ss_pred HHHHHHHHHHHhCC--------CceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC
Confidence 47899999999832 23455555699999999999999999999999998876654 6779988887 54
Q ss_pred CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCC-CccccCCCCCCcccccC
Q 019298 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY-GHLVFGDKPFVPMGVFG 232 (343)
Q Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay-~~~~~~~~~~~~~~~~~ 232 (343)
+ |++++++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++| +.. +... ++ ..
T Consensus 132 ~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~---~~-~~- 195 (421)
T 2ctz_A 132 E-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR---PL-AW- 195 (421)
T ss_dssp C-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC---GG-GG-
T ss_pred C-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC---cc-cc-
Confidence 2 799999999888999999999999999987 788899999999999999999 543 2221 11 11
Q ss_pred CCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 233 STVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
+..++++|+||.++++|.|+|++++.+
T Consensus 196 --~~Di~~~s~~K~l~~~g~~~G~~~~~~ 222 (421)
T 2ctz_A 196 --GAALVTHSLTKWVGGHGAVIAGAIVDG 222 (421)
T ss_dssp --TCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred --CCeEEEECCcccccCCCCcEEEEEEec
Confidence 234999999999999999999988863
No 210
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.88 E-value=2.5e-21 Score=183.72 Aligned_cols=268 Identities=13% Similarity=0.110 Sum_probs=180.9
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh----c------
Q 019298 52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL----S------ 121 (343)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l----~------ 121 (343)
+.++.+.+++.....+.....|.......++++.+.+++.+.+|.+ ..+.+++|+|+++++..++.++ .
T Consensus 111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~ 189 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGH 189 (497)
T ss_dssp CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence 4667777777555444334456554466788888888888777653 2379999999999999988873 2
Q ss_pred ---CC------CC-eEEEeCCCCcchHHHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhcCC----ce--EEEEeCC
Q 019298 122 ---RP------GA-NILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN----TV--ALVIINP 182 (343)
Q Consensus 122 ---~~------gd-~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~----~~--~i~~~~p 182 (343)
.+ |+ .|+++.++|..+...+...|. +++.++++ .++.+|+++|++++++. ++ +++++.+
T Consensus 190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~ 267 (497)
T 2qma_A 190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAG 267 (497)
T ss_dssp CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred chhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCC
Confidence 12 46 799999999999988888876 68888875 45789999999988642 33 7788899
Q ss_pred CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC-cccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~ 261 (343)
+||||.. +++++|+++|++||+++++|++|+.+..... .. .+..+. ...+++.|++|.++.+ .++|++++++
T Consensus 268 ~~~tG~~---~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~--~~D~i~~s~hK~l~~p-~~~G~l~~~~ 340 (497)
T 2qma_A 268 TTDHGAI---DDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVE--RAHSISVDFHKLFYQT-ISCGALLVND 340 (497)
T ss_dssp CTTTCCB---CCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGG--GCSEEEEETTTTTCCC-SSCEEEEESC
T ss_pred CCCCCCC---CCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcc--cCCEEEEcchhccCCC-cceEEEEEeC
Confidence 9999998 6688999999999999999999998765332 11 111111 2237788999997766 6899999875
Q ss_pred CCCCCCchHHHHHHhhhhcc-ccC----c-------------chHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 019298 262 PCGMFRKPKVVERMKKYFDI-LGD----P-------------ATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYK 323 (343)
Q Consensus 262 ~~~~~~~~~~~~~l~~~~~~-~~~----~-------------~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~ 323 (343)
+. .++.+...... ... + ..+.+.++ ...+. ...+.+..+++.++++.+.+.|+
T Consensus 341 ~~-------~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~-l~~lg-~~g~~~~~~~~~~~a~~l~~~L~ 411 (497)
T 2qma_A 341 KS-------NFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMT-MQNVG-PKALGDMYDHLLAQTLEVADMIR 411 (497)
T ss_dssp GG-------GGGGGCC--------------------CCSCCCTHHHHHHH-HHHTC-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-------HHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHH-HHHhC-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 33 12222110000 000 0 11222222 12221 12223377888899999999999
Q ss_pred CCCCceee-CCCCceE
Q 019298 324 LIPELINF-KSTGSSL 338 (343)
Q Consensus 324 ~~~g~~~~-~~~~g~~ 338 (343)
++|++++. .|+.+++
T Consensus 412 ~~~~~~~~~~~~~~~v 427 (497)
T 2qma_A 412 TNDQFELLAEPSLSTV 427 (497)
T ss_dssp TCTTEEECSCCSSSEE
T ss_pred hCCCeEEEcCCCceEE
Confidence 98899864 4555543
No 211
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.88 E-value=2.1e-21 Score=183.81 Aligned_cols=269 Identities=7% Similarity=0.007 Sum_probs=186.5
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-------CCcEEEecChHHHHHHHHHHhcCC---
Q 019298 54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-------PNDVFVTSGCTQAIDVAMALLSRP--- 123 (343)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-------~~~i~~~~g~~~al~~~~~~l~~~--- 123 (343)
+..+.+.+..++.. ....|....+..++++.+++++.+.+|.+.. ...+++|+|+++++..++.++..+
T Consensus 87 ~~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~ 165 (486)
T 1js3_A 87 PAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR 165 (486)
T ss_dssp HHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhh
Confidence 44567777777643 3345666566789999999999988886532 357899999999999988776321
Q ss_pred ------CC----------eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCc------eEEEEeC
Q 019298 124 ------GA----------NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT------VALVIIN 181 (343)
Q Consensus 124 ------gd----------~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~~~~ 181 (343)
|| .|+++.++|..+...++..|++++.++++ .++.+|+++|++++++++ .++++++
T Consensus 166 ~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~ 243 (486)
T 1js3_A 166 RLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATL 243 (486)
T ss_dssp HHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred hhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeC
Confidence 32 37889999999999999999999999875 467899999999987644 3788899
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~ 260 (343)
|+||||.+ +++++|+++|++||+++++|++|+.+.+....... +..+.. -..++.|++|.++.+ .++|++++.
T Consensus 244 ~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~--adsi~~~~hK~~~~p-~~~G~l~~~ 317 (486)
T 1js3_A 244 GTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEF--ADSFNFNPHKWLLVN-FDCSAMWVK 317 (486)
T ss_dssp SCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEES
T ss_pred CCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccc--cCeeEEchhhhcCCC-cceEEEEEe
Confidence 99999988 78899999999999999999999986543221111 111111 125567899997765 889999996
Q ss_pred CCCCCCCchHH-HHHHhhh---h-c-----------------cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Q 019298 261 DPCGMFRKPKV-VERMKKY---F-D-----------------ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSC 318 (343)
Q Consensus 261 ~~~~~~~~~~~-~~~l~~~---~-~-----------------~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~ 318 (343)
++ .. .+.+... . . .......+.+.++ ...+.. ..+-+..++..++++.+
T Consensus 318 ~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~a-l~~~g~-~g~~~~~~~~~~~a~~l 388 (486)
T 1js3_A 318 RR-------TDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFV-FRMYGV-KGLQAYIRKHVQLSHEF 388 (486)
T ss_dssp CH-------HHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CH-------HHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHH-HHHHhH-HHHHHHHHHHHHHHHHH
Confidence 52 22 2222100 0 0 0001123333333 222211 22333778888899999
Q ss_pred HHhhcCCCCceee-CCCCceEee
Q 019298 319 VPSYKLIPELINF-KSTGSSLKY 340 (343)
Q Consensus 319 ~~~L~~~~g~~~~-~~~~g~~~~ 340 (343)
.+.|+++||+++. .|+.+++.|
T Consensus 389 ~~~L~~~~~~~~~~~~~~~~v~f 411 (486)
T 1js3_A 389 EAFVLQDPRFEVCAEVTLGLVCF 411 (486)
T ss_dssp HHHHHHCTTEEECSCCCSSEEEE
T ss_pred HHHHhcCCCeEEeCCCceeEEEE
Confidence 9999988899964 466666554
No 212
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.88 E-value=1.5e-21 Score=180.08 Aligned_cols=267 Identities=11% Similarity=0.024 Sum_probs=167.7
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE-ecChHH
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV-TSGCTQ 111 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~-~~g~~~ 111 (343)
.+..++|+.|. .++++.+++++.+..... ....+.+ ...++.+.+.+.+.+.+|.. .+++|++ |+|+++
T Consensus 38 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~ 108 (398)
T 2fyf_A 38 KPRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQA--PVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATA 108 (398)
T ss_dssp SCSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSH--HHHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHH
T ss_pred ccCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhH
Confidence 34456666543 467888888887631110 0011222 11223344444444444433 3578998 999999
Q ss_pred HHHHHHHHhcCCCCeEEEeCCCCcc-hHHHHHhc--CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCccc
Q 019298 112 AIDVAMALLSRPGANILLPRPGFPI-YELSAAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGN 188 (343)
Q Consensus 112 al~~~~~~l~~~gd~vl~~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~ 188 (343)
++..++++++++| .+.+..+.|.. ....+... |.+++.++.+ +++..+. .+++++++|++++|+||||.
T Consensus 109 al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG~ 180 (398)
T 2fyf_A 109 FWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTGV 180 (398)
T ss_dssp HHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTTE
T ss_pred HHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcce
Confidence 9999999998887 22333333321 12234555 7888888775 3333332 24567899999999999999
Q ss_pred ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc
Q 019298 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (343)
Q Consensus 189 ~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~ 268 (343)
+++.+++.++ +|+++|+|++|..+... ..+. +..+++.|+||.|+.+| ++||++++
T Consensus 181 ~~~~~~i~~~------~~~~vivD~a~~~~~~~----~~~~-----~~di~~~s~sK~~~~~g-g~g~l~~~-------- 236 (398)
T 2fyf_A 181 AVAVRRPEGS------DDALVVIDATSGAGGLP----VDIA-----ETDAYYFAPQKNFASDG-GLWLAIMS-------- 236 (398)
T ss_dssp ECCCCCCTTC------C-CEEEEECTTTTTTSC----CCGG-----GCSEEEECTTSTTCSCS-SEEEEEEC--------
T ss_pred ecchHHhhhh------cCCeEEEEeccccCCcc----cCcc-----cCcEEEEecCcccCCCC-ceEEEEEC--------
Confidence 9987776654 79999999999875321 1111 13388999999999886 59999885
Q ss_pred hHHHHHHhhh----------------------hccccCcchHHHHHHHhccchhhHH---HHHHHHHHHHHHHHHHHhhc
Q 019298 269 PKVVERMKKY----------------------FDILGDPATFIQVCIMYGCLSTIMQ---IMIHGNFLENFAGSCVPSYK 323 (343)
Q Consensus 269 ~~~~~~l~~~----------------------~~~~~~~~~~~~~a~~~~~l~~~~~---~l~~~~~~~~~~~~~~~~L~ 323 (343)
++++++++.. .....+++...+.++ .++|....+ +-+.+++++++++.+.+.|+
T Consensus 237 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~ 315 (398)
T 2fyf_A 237 PAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALL-AEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQ 315 (398)
T ss_dssp HHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHH-HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 3566666321 011234555555555 445543222 33478889999999999999
Q ss_pred CCCCceeeC--C--CCceEeeec
Q 019298 324 LIPELINFK--S--TGSSLKYLD 342 (343)
Q Consensus 324 ~~~g~~~~~--~--~~g~~~~~~ 342 (343)
++||+.+.. | .+++++|++
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~~ 338 (398)
T 2fyf_A 316 ERPYTTPFVTDPGLRSQVVGTID 338 (398)
T ss_dssp HSTTEEESCCSGGGBCSSEEEEE
T ss_pred HcCCceeccCChhhcCCcEEEEE
Confidence 888888653 4 345588775
No 213
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.87 E-value=7.8e-20 Score=168.07 Aligned_cols=244 Identities=14% Similarity=0.091 Sum_probs=171.4
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-------cCCC
Q 019298 52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-------SRPG 124 (343)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-------~~~g 124 (343)
..++++.+++.+++... .|.+..+..++|+.++++++ .+++++++++++++..+++++ .++|
T Consensus 12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g 80 (390)
T 3b8x_A 12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFG--------SKYAVMVSSGSTANLLMIAALFFTKKPRLKKG 80 (390)
T ss_dssp CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence 45788888998888652 35556678999999999993 236777888889999999998 7889
Q ss_pred CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 125 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
|+|+++.|+|..+...++..|.+++.++++++ ++.+|+++|++.++++++++++++ ++|.. .++++|.++|++
T Consensus 81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~---~~~~~i~~l~~~ 153 (390)
T 3b8x_A 81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNP---NNFDEINKIIGG 153 (390)
T ss_dssp CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCC---CCHHHHHHHHTT
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccCh---hhHHHHHHHHHH
Confidence 99999999999999999999999999988653 478999999999988888888874 45555 568899999999
Q ss_pred cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEcc--CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccc
Q 019298 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS--LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL 282 (343)
Q Consensus 205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S--~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~ 282 (343)
+|+++|+|++|+...... ...++... ++.+.| .+|.++ +| +.|++++++ +++.++++......
T Consensus 154 ~~~~li~D~a~~~g~~~~-----~~~~g~~~-~~~~~s~~~~k~~~-~g-~gG~~~~~~-------~~l~~~~~~~~~~g 218 (390)
T 3b8x_A 154 RDIILLEDNCESMGATFN-----NKCAGTFG-LMGTFSSFYSNHIA-TM-EGGCIVTDD-------EEIYHILLCIRAHG 218 (390)
T ss_dssp SCCEEEEECTTCTTCEET-----TEETTSSS-SEEEEECCTTSSSC-SS-SCEEEEESC-------HHHHHHHHHHTBTT
T ss_pred cCCEEEEECcCcccCEEC-----Cccccccc-ceEEEEccCCCCCc-cC-CceEEEeCC-------HHHHHHHHHHHhcC
Confidence 999999999999532211 11111111 133323 345543 23 348888853 34555554332100
Q ss_pred --------------------------------cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298 283 --------------------------------GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 283 --------------------------------~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
...+.+..+++ .+.+ ..+-+..++.+++++.+.+.|+++||+.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~-l~~l---~~l~~~~~~~~~~~~~l~~~L~~~~~~~~ 294 (390)
T 3b8x_A 219 WTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIG-IEQL---KKLPRFISVRRKNAEYFLDKFKDHPYLDV 294 (390)
T ss_dssp BSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHTTCSSEEE
T ss_pred CCccccccccccccccccccccccceeccccccCcCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 11344444433 2222 22223777788889999999998888876
Q ss_pred eC
Q 019298 331 FK 332 (343)
Q Consensus 331 ~~ 332 (343)
..
T Consensus 295 ~~ 296 (390)
T 3b8x_A 295 QQ 296 (390)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 214
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.86 E-value=1.3e-19 Score=172.54 Aligned_cols=252 Identities=11% Similarity=0.049 Sum_probs=174.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-------C-CCC------eEEEeCCCCcc
Q 019298 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-------R-PGA------NILLPRPGFPI 136 (343)
Q Consensus 71 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-------~-~gd------~vl~~~p~~~~ 136 (343)
..|...++..++++.+.+++.+.+|. +++++++++|+++++..++..+. + +|+ +|+++.++|+.
T Consensus 138 ~~~~~s~~~~~le~~~~~~la~l~g~--~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s 215 (515)
T 2jis_A 138 YTYEIAPVFVLMEEEVLRKLRALVGW--SSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS 215 (515)
T ss_dssp TCTTTCHHHHHHHHHHHHHHHHHHTC--SSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred CchhhchHHHHHHHHHHHHHHHHhCC--CCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH
Confidence 35665556667777777777666554 37899999999999998888763 2 575 89999999999
Q ss_pred hHHHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCc
Q 019298 137 YELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207 (343)
Q Consensus 137 ~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 207 (343)
+...++..|. +++.++++ .++.+|+++|++++++ ++++|++++|+||||.+ +++++|+++|+++|+
T Consensus 216 ~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i---~~l~~I~~la~~~g~ 290 (515)
T 2jis_A 216 IQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAF---DPLEAIADVCQRHGL 290 (515)
T ss_dssp HHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB---CCHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCc---cCHHHHHHHHHHcCC
Confidence 9999998888 78888775 3577999999998865 37889999999999999 457888999999999
Q ss_pred EEEEccCCCccccCCCCCC-cccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh----hh-c-
Q 019298 208 LVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK----YF-D- 280 (343)
Q Consensus 208 ~~i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~----~~-~- 280 (343)
++++|++|+.+........ .+..+. ...+++.|++|.++.+ .++|++++.++. ++.++... .. .
T Consensus 291 ~l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~~------~~~~~~~~~~~~yl~~~ 361 (515)
T 2jis_A 291 WLHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDTS------NLLKRCHGSQASYLFQQ 361 (515)
T ss_dssp EEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCCS------CHHHHHHCC--------
T ss_pred eEEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeChH------HHHHHHhcCCchhccCC
Confidence 9999999998765433211 111111 2238889999997654 568999997641 13332110 00 0
Q ss_pred ----------------cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC-CCCceEee
Q 019298 281 ----------------ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK-STGSSLKY 340 (343)
Q Consensus 281 ----------------~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~-~~~g~~~~ 340 (343)
.......+.+.++ ..++.. ..+-+..++..++++++.+.|+++||+++.. |..+.+.|
T Consensus 362 ~~~~~~~~~~~~~~~~~~rr~~al~~~~~-l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f 436 (515)
T 2jis_A 362 DKFYDVALDTGDKVVQCGRRVDCLKLWLM-WKAQGD-QGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCF 436 (515)
T ss_dssp -CCSCGGGCCGGGCSCSSCCCCHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEE
T ss_pred cccccccCCCCCCCCCCCCcccHHHHHHH-HHHHhH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEE
Confidence 0001112333333 222221 2233377888899999999999988998644 44555544
No 215
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.86 E-value=3.4e-21 Score=180.78 Aligned_cols=243 Identities=11% Similarity=0.016 Sum_probs=163.9
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEecChH-HHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT-QAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLP 155 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~-~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 155 (343)
..++.+.+.+++.+.+|. +++ +++|+|++ .++..++.++.. +|+.|++++++|..+...++..|++++.++..+
T Consensus 131 ~~~~~~~~~~~la~~~g~--~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~ 207 (456)
T 2z67_A 131 MYALTNKILESFFKQLGL--NVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL 207 (456)
T ss_dssp HHHHHHHHHHHHHHHTTC--CCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHcCC--CCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEec
Confidence 345556666666665554 344 99999999 566545555433 678899999999999999999999999887643
Q ss_pred -CCCCCCCHHHHHhhh-c----CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc
Q 019298 156 -DKGWEVDLDDIESLA-D----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG 229 (343)
Q Consensus 156 -~~~~~~d~~~l~~~~-~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~ 229 (343)
++++.+|+++|++++ + .++.++++++|+||||.+ +++++|+++|+++|+++++|++|+.+..+-.+ ....
T Consensus 208 ~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i---~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~-~~~~ 283 (456)
T 2z67_A 208 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNYYLE-KLKK 283 (456)
T ss_dssp ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHH-HHHH
T ss_pred cCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCc---CCHHHHHHHHHHcCCcEEEECcchHHHHHhhH-HHHH
Confidence 356789999999998 4 356677789999999999 56788888999999999999999876542110 0111
Q ss_pred ccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcccc-CcchHHHHHHHhccchhhHHHHHHH
Q 019298 230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQVCIMYGCLSTIMQIMIHG 308 (343)
Q Consensus 230 ~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~l~~~ 308 (343)
.+.. ...+++.|++|.+ ..+.++||+++.+ +++++++........ ..+...+.+. ...+. ...+.+.+
T Consensus 284 ~~~~-~~D~~~~s~hK~~-~~p~g~G~l~~~~-------~~~~~~l~~~~~g~~~~~~~~~~~aa-l~~l~-~~~~~~~~ 352 (456)
T 2z67_A 284 AFKY-RVDAVVSSSDKNL-LTPIGGGLVYSTD-------AEFIKEISLSYPGRASATPVVNTLVS-LLSMG-SKNYLELV 352 (456)
T ss_dssp HHTS-CCSEEEEEHHHHH-CCCSSCEEEEESC-------HHHHHHHHTTSCSCBCSHHHHHHHHH-HHHHH-HHHHHHHH
T ss_pred hhCC-CCCEEEEcCCCCc-CCCCCeEEEEEcC-------HHHHhhcCcCCCCCCCCCHHHHHHHH-HHHHH-HHHHHHHH
Confidence 1111 1226789999974 4558899999843 457776644322111 1223333333 12221 12233378
Q ss_pred HHHHHHHHHHHHhhcCCC---CceeeCCCCceEeee
Q 019298 309 NFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYL 341 (343)
Q Consensus 309 ~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~ 341 (343)
++..++++++.+.|++++ |+.+..|+ .++++
T Consensus 353 ~~~~~~~~~l~~~L~~~~~~~g~~v~~~~--~~v~~ 386 (456)
T 2z67_A 353 KNQKNSKKLLDELLNDLSKKTGGKFLDVE--SPIAS 386 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCBCCCC--CSSEE
T ss_pred HHHHHHHHHHHHHHHhcccccCCEecCCC--CeEEE
Confidence 888899999999998875 77665666 44443
No 216
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.85 E-value=4e-20 Score=173.56 Aligned_cols=284 Identities=14% Similarity=0.061 Sum_probs=168.3
Q ss_pred ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CC---CHHHHHHHHHHHhhhCCCCCCCCc---EEEe
Q 019298 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT---AG---LPLTRRAIAEYLSRDLPYKLTPND---VFVT 106 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g---~~~lr~~ia~~~~~~~~~~~~~~~---i~~~ 106 (343)
..+.|..+. ..+++.+++++...+.+....+|+.. .| ..++++...+.+.+.+| .+.+. .+++
T Consensus 55 ~~i~lias~------n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g--~~~~~~~~~v~~ 126 (490)
T 2a7v_A 55 RGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFD--LDPAQWGVNVQP 126 (490)
T ss_dssp HSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTT--CCTTTEEEECCC
T ss_pred cCceEECCC------CCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcC--CCcccCceEEeC
Confidence 557776543 23689999999888765332344321 12 24666444444444343 34432 3455
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH--------HHHhcCceeE--EeecCCCCCCCCCHHHHHhhhc-CCce
Q 019298 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYEL--------SAAFRHIEVR--HFDLLPDKGWEVDLDDIESLAD-QNTV 175 (343)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~--~~~~~~~~~~~~d~~~l~~~~~-~~~~ 175 (343)
+|+++++..++.++++|||+|++.++.|.++.. .+...|..+. .+++++ .++.+|++++++.++ .+++
T Consensus 127 ~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~-~~~~iD~d~le~~l~~~~~k 205 (490)
T 2a7v_A 127 YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPR 205 (490)
T ss_dssp SSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred CchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-ccCCcCHHHHHHHHhhcCCc
Confidence 678999999999999999999999999865321 2234454433 344333 346899999999886 3688
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
+++++.++||+.. ++++|.++|++||+++++|++|. ++...+..+.++. .-.+++.|+||++ .|.|.
T Consensus 206 lIi~~~s~~~~~~-----dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~-----~aDiv~~S~hK~l--~Gp~G 273 (490)
T 2a7v_A 206 LIIAGTSAYARLI-----DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK-----HADIVTTTTHKTL--RGARS 273 (490)
T ss_dssp EEEECCSSCCSCC-----CHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG-----TCSEEEEESSGGG--CSCSC
T ss_pred EEEEcCCCCCCcc-----cHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC-----CCCEEEECCcccC--ccccc
Confidence 8888888888532 47889999999999999999976 3443333222332 1238899999996 46678
Q ss_pred EEEEEeCCCCCCCch--------HHHHHHhhhhc-c-ccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhh
Q 019298 255 GWFVTTDPCGMFRKP--------KVVERMKKYFD-I-LGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSY 322 (343)
Q Consensus 255 G~i~~~~~~~~~~~~--------~~~~~l~~~~~-~-~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L 322 (343)
|+++++++. +..++ ++.++++.... . .++++....+++ ..++... .++-+.++++.++++.+.+.|
T Consensus 274 G~i~~~~~~-~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAl-a~Al~~~~~~~~~~~~~~~~~na~~L~~~L 351 (490)
T 2a7v_A 274 GLIFYRKGV-KAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAV-AVALKQACTPMFREYSLQVLKNARAMADAL 351 (490)
T ss_dssp EEEEEECSE-EEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeeccch-hcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 999987631 00000 24455554432 1 223344433443 3344322 244447888999999999999
Q ss_pred cCCCCceeeC-CCCceEeeecC
Q 019298 323 KLIPELINFK-STGSSLKYLDL 343 (343)
Q Consensus 323 ~~~~g~~~~~-~~~g~~~~~~l 343 (343)
.+. |+.+.. +...+++|+++
T Consensus 352 ~~~-G~~v~~~~t~t~lv~vdl 372 (490)
T 2a7v_A 352 LER-GYSLVSGGTDNHLVLVDL 372 (490)
T ss_dssp HHT-TCEEGGGSCSSSEEEEEC
T ss_pred HHc-CcEEecCCCCCeEEEEEe
Confidence 987 888643 35567888764
No 217
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.85 E-value=1.2e-19 Score=171.32 Aligned_cols=310 Identities=8% Similarity=-0.001 Sum_probs=202.9
Q ss_pred CcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-CCC-CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 019298 10 NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-HSC-FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA 87 (343)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia 87 (343)
+|....+...++..+.+... .......++..-. .+. ...+..+.+.+..++.. ....|...++..++++.++
T Consensus 51 ~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~ 124 (481)
T 4e1o_A 51 APEDPDSWDSIFGDIERIIM-----PGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINC-LGFTWASSPACTELEMNVM 124 (481)
T ss_dssp CCSSCCCHHHHHHHHHHHTG-----GGCCCTTSTTBCSSSCCCCCHHHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHh-----cCCCCCCCCCeeEeCCCCCCHHHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHH
Confidence 34445567777777766552 1222222221100 011 12334455666666654 3457877778899999999
Q ss_pred HHHhhhCCCCCCC--------CcEEEecChHHHHHHHHHHhcC-------------------CCCeEEEeCCCCcchHHH
Q 019298 88 EYLSRDLPYKLTP--------NDVFVTSGCTQAIDVAMALLSR-------------------PGANILLPRPGFPIYELS 140 (343)
Q Consensus 88 ~~~~~~~~~~~~~--------~~i~~~~g~~~al~~~~~~l~~-------------------~gd~vl~~~p~~~~~~~~ 140 (343)
+|+.+.+|.+... ...++|+|+++++..++.+..+ +++.|+++.++|..+...
T Consensus 125 ~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~ 204 (481)
T 4e1o_A 125 DWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKA 204 (481)
T ss_dssp HHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHH
T ss_pred HHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHH
Confidence 9999887765332 3678999999999888876632 567999999999999999
Q ss_pred HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC------ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccC
Q 019298 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214 (343)
Q Consensus 141 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~a 214 (343)
+...|.+++.++++ .++.+|+++|++++++. +.+++++.++|+||.+ +++++|+++|++||+++++|.+
T Consensus 205 ~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~i---d~l~~I~~la~~~~~~lhvDaA 279 (481)
T 4e1o_A 205 GLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAF---DCLSELGPICAREGLWLHIDAA 279 (481)
T ss_dssp HHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB---CCHHHHHHHHHHHTCEEEEECT
T ss_pred HHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCc---CCHHHHHHHHHHcCCeEEeehh
Confidence 99999999999874 56789999999998653 5677888999999998 7789999999999999999999
Q ss_pred CCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH-Hhhhhcc-----------
Q 019298 215 YGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER-MKKYFDI----------- 281 (343)
Q Consensus 215 y~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~-l~~~~~~----------- 281 (343)
|+........... ..... .-..++.+++|.++.+ ..+|++++.+ +....+ +......
T Consensus 280 ~g~~~~~~~~~~~~~~gi~--~aDsi~~~~hK~l~~p-~g~g~l~~~~-------~~~l~~~~~~~~~yl~~~~~~~~~~ 349 (481)
T 4e1o_A 280 YAGTAFLCPEFRGFLKGIE--YADSFTFNPSKWMMVH-FDCTGFWVKD-------KYKLQQTFSVNPIYLRHANSGVATD 349 (481)
T ss_dssp TGGGGGGSGGGGGGGTTGG--GCSEEEECHHHHSSCC-SSCEEEEESB-------HHHHHTTTCCCCGGGCCTTTTTSCC
T ss_pred hHHHHHhChhhHHHhcCcc--cCCEEEEChHHhcCCC-CceEEEEEeC-------HHHHHHHhcCCchhccCcccCCCCC
Confidence 9986433221111 11111 1126678999997765 4467777754 233221 1100000
Q ss_pred --------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298 282 --------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD 342 (343)
Q Consensus 282 --------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~ 342 (343)
......+.+.++ ...+. ...+-+..++..++++++.+.|+++||+++..+...++++++
T Consensus 350 ~~~~~~~~~r~~~~l~~~~a-l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~ 416 (481)
T 4e1o_A 350 FMHWQIPLSRRFRSVKLWFV-IRSFG-VKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFR 416 (481)
T ss_dssp GGGGSSSSCCCCTHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEE
T ss_pred cccccccCCCCccHHHHHHH-HHHhH-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEE
Confidence 000122333333 12221 122333788889999999999999999997666555555553
No 218
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.76 E-value=3.8e-23 Score=193.07 Aligned_cols=277 Identities=17% Similarity=0.046 Sum_probs=183.3
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++.+|||..|.... .++ .+|.+.+++.+++.......|+. ....+|.+.+++++ + ..+.+++++|+++
T Consensus 98 dG~~yiD~~~~~~~~--~lGh~~p~V~~Av~~q~~~~~~~~~~~-~~~~~Lae~L~~~~------p-~~~~v~~~nSGse 167 (465)
T 2yky_A 98 DGHAYVNFLGEYTAG--LFGHSHPVIRAAVERALAVGLNLSTQT-ENEALFAEAVCDRF------P-SIDLVRFTNSGTE 167 (465)
Confidence 388899999887431 233 68999999999887643334533 44567777777776 2 4578999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHH----hcCc--eeEEeecCCCCCCCCCHHHHHhhhc---CCceEEEEe
Q 019298 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAA----FRHI--EVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVII 180 (343)
Q Consensus 112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~----~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~ 180 (343)
++..+++.+. ..+++|++.+++|.++...+. ..|. .+..++. -|+++|++.++ +++++|++.
T Consensus 168 A~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~e 240 (465)
T 2yky_A 168 ANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVE 240 (465)
Confidence 9999998753 345899999999987655433 1122 1222221 26888888887 456666654
Q ss_pred CCCCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 181 NPGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 181 ~p~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
..++++|.+. +.+.+++|.++|++||+++|+||+|. +..+ . ......+ +...-+.||||.++. |+|+||+++
T Consensus 241 pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g-~-~~a~~~~---gv~pDi~t~sK~lg~-G~piG~v~~ 313 (465)
T 2yky_A 241 PMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLS-G-GGAQEML---GISADLTTLGKYIGG-GMSFGAFGG 313 (465)
Confidence 4366799654 67889999999999999999999999 6432 1 1111111 112334589999886 999999998
Q ss_pred eCCCCCCCchHHHHHHhh------hhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC-C--Ccee
Q 019298 260 TDPCGMFRKPKVVERMKK------YFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI-P--ELIN 330 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~-~--g~~~ 330 (343)
+. ++++.+.. ....+++.++++++++ .+.|+...+ -+..++++++.+.+.+.|+++ . ++..
T Consensus 314 ~~--------~i~~~l~~~~~g~~~~~~T~~~npla~aAa-~aaL~~l~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 383 (465)
T 2yky_A 314 RR--------DLMERFDPARDGAFAHAGTFNNNILTMSAG-HAALTQIYT-RQAASDLSASGDRFRANLNRIAVENQAPL 383 (465)
Confidence 64 56666655 1223557788888877 555542111 125667777777777776653 1 2322
Q ss_pred eCCCCceEeeecC
Q 019298 331 FKSTGSSLKYLDL 343 (343)
Q Consensus 331 ~~~~~g~~~~~~l 343 (343)
..+..|.++|+.|
T Consensus 384 ~v~g~G~~~~i~~ 396 (465)
T 2yky_A 384 QFTGLGSLGTIHF 396 (465)
Confidence 2345677777643
No 219
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.85 E-value=1.4e-20 Score=175.99 Aligned_cols=169 Identities=14% Similarity=0.116 Sum_probs=124.4
Q ss_pred CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeec
Q 019298 74 APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153 (343)
Q Consensus 74 ~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 153 (343)
.+.....++++.+++ ++ .+ +++++++|+++++..++++++++||+|++++|+|.++...+...|.+++.++.
T Consensus 54 ~~~~~~~~~~~~la~-~g------~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~ 125 (446)
T 2x3l_A 54 HPEEVILKSMKQVEK-HS------DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIET 125 (446)
T ss_dssp SCSSHHHHHHHHHCS-CT------TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEE
T ss_pred CcchHHHHHHHHHHh-cC------CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeC
Confidence 333445667777776 62 23 68999999999999999999999999999999999999999999999999887
Q ss_pred CCCCC----CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcc
Q 019298 154 LPDKG----WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPM 228 (343)
Q Consensus 154 ~~~~~----~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~ 228 (343)
..+++ +.+|+++| ++++++++++++ +|++|.+.+ +++|+++|++||+++|+|++|+. +.|.+. +...
T Consensus 126 ~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~ 197 (446)
T 2x3l_A 126 HQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDST 197 (446)
T ss_dssp EECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCG
T ss_pred eeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCCh
Confidence 32233 46788877 455788999998 566999976 67888999999999999999996 334443 2222
Q ss_pred cccCCCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298 229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262 (343)
Q Consensus 229 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~ 262 (343)
...+ ..+++.|+||+++ ++.++||+++++.
T Consensus 198 ~~~g---~Di~~~S~~K~l~-~~~g~g~l~~~~~ 227 (446)
T 2x3l_A 198 LNYQ---ADYVVQSFHKTLP-ALTMGSVLYIHKN 227 (446)
T ss_dssp GGGT---CSEEEECHHHHSS-SCTTCEEEEEETT
T ss_pred HHcC---CCEEEECCccccc-cccccEEEEEcCC
Confidence 2222 2399999999633 3345899999753
No 220
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.83 E-value=5.4e-19 Score=166.51 Aligned_cols=314 Identities=10% Similarity=0.008 Sum_probs=197.2
Q ss_pred cCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCC----CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHH
Q 019298 9 DNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSC----FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRR 84 (343)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~ 84 (343)
.+|....+...++..+.+... .......+ |..... ...+..+.+.+..++..+ ...|...++..++++
T Consensus 45 ~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~--p~~~~~~~~~~~~~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~ 116 (475)
T 3k40_A 45 AAPEKPEKWQDVMQDIERVIM-----PGVTHWHS--PKFHAYFPTANSYPAIVADMLSGAIACI-GFTWIASPACTELEV 116 (475)
T ss_dssp SCCSSCCCHHHHHHHHHHHTG-----GGCCCTTC--TTBCCSSCCCCCHHHHHHHHHHHHHCCC-SSSCCCCHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHh-----ccCCCCCC--cCceeeCCCCCcHHHHHHHHHHHHhCcc-ccCccCCcHHHHHHH
Confidence 344445567777777776552 12222222 221111 122334455566665443 346777778889999
Q ss_pred HHHHHHhhhCCCCCCC-------CcEEEecChHHHHHHHHHHhcC-------------------CCCeEEEeCCCCcchH
Q 019298 85 AIAEYLSRDLPYKLTP-------NDVFVTSGCTQAIDVAMALLSR-------------------PGANILLPRPGFPIYE 138 (343)
Q Consensus 85 ~ia~~~~~~~~~~~~~-------~~i~~~~g~~~al~~~~~~l~~-------------------~gd~vl~~~p~~~~~~ 138 (343)
.+++|+.+.+|.+... ...++|+|+++++..++.+... ++++|+++.++|..+.
T Consensus 117 ~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~ 196 (475)
T 3k40_A 117 VMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVE 196 (475)
T ss_dssp HHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHH
T ss_pred HHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHH
Confidence 9999999888765321 3688999999998888776521 3468999999999999
Q ss_pred HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC------ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
..+...|.+++.++++ .++ +|+++|++++++. +.+++++.++|+||.+ +++++|+++|++||+++++|
T Consensus 197 ~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~---~~l~~I~~la~~~~~~lhvD 270 (475)
T 3k40_A 197 RAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAF---DYLDECGPVGNKHNLWIHVD 270 (475)
T ss_dssp HHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB---CCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCc---CCHHHHHHHHHHhCCeEEEe
Confidence 9999999999999875 356 9999999998653 5677888999999999 77899999999999999999
Q ss_pred cCCCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC----chHHHHHHh-----hhhccc
Q 019298 213 EVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR----KPKVVERMK-----KYFDIL 282 (343)
Q Consensus 213 ~ay~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~----~~~~~~~l~-----~~~~~~ 282 (343)
++|+........... +..+. .-..+..|++|.++.+ ..+|++++.++..+.. .+..+..-. ......
T Consensus 271 ~A~~~~~~~~~~~~~~~~gi~--~~Ds~~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 347 (475)
T 3k40_A 271 AAYAGSAFICPEYRHLMKGIE--SADSFNFNPHKWMLVN-FDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQ 347 (475)
T ss_dssp CTTGGGGGGSGGGGGGGTTGG--GCSEEEECHHHHSSCC-SSCEEEEESSGGGC--------------------------
T ss_pred HHhHHHHHhCHhhHHHhcCcc--cCCEEEECchhccCCC-CceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCccccc
Confidence 999875432221111 11111 1237788999986554 4578888876432110 000000000 000000
Q ss_pred --cC--cchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298 283 --GD--PATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL 341 (343)
Q Consensus 283 --~~--~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~ 341 (343)
.+ ...+.+.++ ...+. ...+-+..++..++.+++.+.|+++||+++..+.....+++
T Consensus 348 ~~~sr~~~~l~l~~a-l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f 408 (475)
T 3k40_A 348 IPLGRRFRALKLWFV-LRLYG-VENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCF 408 (475)
T ss_dssp -CCCGGGTHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEE
T ss_pred ccCCCcccHHHHHHH-HHHHh-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEE
Confidence 00 012222222 11111 12233378888899999999999999999765554444444
No 221
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.81 E-value=3.5e-19 Score=174.40 Aligned_cols=241 Identities=14% Similarity=0.038 Sum_probs=158.4
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH-HHhcCceeEEeecCC
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-AAFRHIEVRHFDLLP 155 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~ 155 (343)
.-..++++.+|++++ .+ ..+++++|+++++..++.+++++||+|+++.++|.++... +...|++++.++...
T Consensus 173 ~~i~e~e~~lA~~~g------ae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~ 245 (730)
T 1c4k_A 173 GPAVAAEKHAARVYN------AD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNR 245 (730)
T ss_dssp THHHHHHHHHHHHTT------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEE
T ss_pred HHHHHHHHHHHHHHC------CC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCc
Confidence 345789999999983 22 4577888889999999999999999999999999988877 788899988887643
Q ss_pred CCCCC----CCHHHH-----HhhhcCC------c----eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC
Q 019298 156 DKGWE----VDLDDI-----ESLADQN------T----VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216 (343)
Q Consensus 156 ~~~~~----~d~~~l-----~~~~~~~------~----~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~ 216 (343)
+ .++ +|+++| +++++++ + +++++++| ||+|.+. ++++|+++|+++++++++|++|+
T Consensus 246 ~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~---dl~~I~~la~~~g~~livDeAh~ 320 (730)
T 1c4k_A 246 N-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIY---NAHEVVKRIGHLCDYIEFDSAWV 320 (730)
T ss_dssp C-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEE---CHHHHHHHHGGGBSEEEEECTTC
T ss_pred c-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeec---CHHHHHHHHHHcCCeEEEEcccc
Confidence 2 233 688888 8888654 4 78999998 5899995 47888999999999999999997
Q ss_pred cc-ccCCCC--CCcccc--cC-CCCCEEEEccCccccCCCCCcEE-EEEEeCCCC----CCCchHHHHHHhhhhccccCc
Q 019298 217 HL-VFGDKP--FVPMGV--FG-STVPILTLGSLSKRWIVPGWRLG-WFVTTDPCG----MFRKPKVVERMKKYFDILGDP 285 (343)
Q Consensus 217 ~~-~~~~~~--~~~~~~--~~-~~~~~i~~~S~sK~~~~~G~r~G-~i~~~~~~~----~~~~~~~~~~l~~~~~~~~~~ 285 (343)
.. .+++.. ..++.. +. +..++++++|+||++ +|++.| ++.++++.. ...+............ +.++
T Consensus 321 ~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~-stsp 397 (730)
T 1c4k_A 321 GYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFM-STSP 397 (730)
T ss_dssp CGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHS-CSSC
T ss_pred cccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhC-CCCC
Confidence 53 343211 111211 12 234679999999984 555554 554544320 0001111111111111 2344
Q ss_pred chHHHHHHHhccchhhH--HHHHHHHHHHHHHHHHHHhhcC-CCCceeeCC
Q 019298 286 ATFIQVCIMYGCLSTIM--QIMIHGNFLENFAGSCVPSYKL-IPELINFKS 333 (343)
Q Consensus 286 ~~~~~~a~~~~~l~~~~--~~l~~~~~~~~~~~~~~~~L~~-~~g~~~~~~ 333 (343)
+....+++ .+++.... ...+.++++.++.+.+++.|++ ++|+.+..|
T Consensus 398 ~~~~iaal-~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p 447 (730)
T 1c4k_A 398 FYPMYAAL-DVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVP 447 (730)
T ss_dssp CHHHHHHH-HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSC
T ss_pred cHHHHHHH-HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccc
Confidence 44433333 23322111 1233567777778888888877 678876544
No 222
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.81 E-value=9.7e-19 Score=164.67 Aligned_cols=286 Identities=12% Similarity=0.055 Sum_probs=178.2
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 108 (343)
+++.+|||..|.... .++ .+|.+.+++.+++... ....|+. ....++++.+++.+.+..+ ...++|++++|
T Consensus 61 dG~~ylD~~~g~~~~--~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~s 135 (472)
T 1ohv_A 61 DGNRMLDLYSQISSI--PIGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMAC 135 (472)
T ss_dssp TSCEEEESSHHHHTC--SSCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESS
T ss_pred CCCEEEECCCCHhhc--ccCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCC
Confidence 377899998887542 234 6899999998876421 1123443 3457899999997765432 35689999999
Q ss_pred hHHHHHHHHHHhc--------C-----------------CC---CeEEEeCCCCcchHHHHHh-cCcee-----------
Q 019298 109 CTQAIDVAMALLS--------R-----------------PG---ANILLPRPGFPIYELSAAF-RHIEV----------- 148 (343)
Q Consensus 109 ~~~al~~~~~~l~--------~-----------------~g---d~vl~~~p~~~~~~~~~~~-~g~~~----------- 148 (343)
+++|+..+++.+. . +| +.|++.+++|+++...+.. .|...
T Consensus 136 GseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~ 215 (472)
T 1ohv_A 136 GSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDW 215 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCC
T ss_pred chhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCC
Confidence 9999999998873 1 45 8999999999887665532 23211
Q ss_pred EEeecCCC-----CC--C-----CCCHHHHHhhhcC------CceEEEEeCCCCCcccc-cCHHHHHHHHHHHhhcCcEE
Q 019298 149 RHFDLLPD-----KG--W-----EVDLDDIESLADQ------NTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLV 209 (343)
Q Consensus 149 ~~~~~~~~-----~~--~-----~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~ 209 (343)
..++.... .. + ..|+++|++.+++ ++++|++...+|++|.+ .+.+.+++|.++|++||+++
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll 295 (472)
T 1ohv_A 216 PIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAF 295 (472)
T ss_dssp CEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEE
T ss_pred cccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEE
Confidence 11111100 00 0 1257888888865 56666665558889975 68999999999999999999
Q ss_pred EEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchH
Q 019298 210 IADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATF 288 (343)
Q Consensus 210 i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~ 288 (343)
|+||+|.++.+.+. ...+..++-. ...-+.||||.+ +.| ||++ +. ++. .+.... ..+.+.+++
T Consensus 296 i~DEv~~g~g~~g~-~~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~--------~~~-~~~~~~~~~T~~~~~~ 359 (472)
T 1ohv_A 296 LVDEVQTGGGSTGK-FWAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KE--------EFR-PNAPYRIFNTWLGDPS 359 (472)
T ss_dssp EEECTTTTTTTTSS-SSGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CG--------GGS-CSSSSSSCCSSSSCHH
T ss_pred EEeCcccCCCCCCC-chhccccCCC-CCCCEEEEcccc-ccC---CccC-ch--------hhc-ccccccccCccCccHH
Confidence 99999997665443 1122222211 001234889996 445 7766 32 221 112222 224466788
Q ss_pred HHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC----CC-ceeeCCCCceEeeec
Q 019298 289 IQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI----PE-LINFKSTGSSLKYLD 342 (343)
Q Consensus 289 ~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~----~g-~~~~~~~~g~~~~~~ 342 (343)
+++++ .++|+...+ -+..++++++++.+.+.|+++ |+ +....+. |.+++++
T Consensus 360 ~~aaa-~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~-g~~~~~~ 415 (472)
T 1ohv_A 360 KNLLL-AEVINIIKR-EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGR-GTFCSFD 415 (472)
T ss_dssp HHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEE-TTEEEEE
T ss_pred HHHHH-HHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCC-ceEEEEE
Confidence 88777 454432111 126677777777777777653 43 3323445 4455544
No 223
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.80 E-value=5.6e-18 Score=155.15 Aligned_cols=230 Identities=10% Similarity=0.047 Sum_probs=156.2
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH--HHHHhcCc--eeEEeecCCC
Q 019298 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE--LSAAFRHI--EVRHFDLLPD 156 (343)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~g~--~~~~~~~~~~ 156 (343)
++.+.+++.+.+.++. + +.+++++|++++++.++..+ .+||+|++.+++|.++. ..++..|. +++.++.+..
T Consensus 35 ~~~~~~~~~l~~~~~~--~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 110 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNA--E-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERT 110 (379)
T ss_dssp HHHHHHHHHHHHHHTC--S-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEES
T ss_pred HHHHHHHHHHHHHhCC--C-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccc
Confidence 3444444444443332 3 68889999999999988655 69999999999997643 34445553 6666665321
Q ss_pred ------CC-CCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcc
Q 019298 157 ------KG-WEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM 228 (343)
Q Consensus 157 ------~~-~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~ 228 (343)
.. ..+|++++++.++ ++++++++++++||||.+++.+++++|+++|++||+++|+|+++. . .. +..+
T Consensus 111 g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~~-~~~~ 185 (379)
T 3ke3_A 111 EDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---CV-WLDM 185 (379)
T ss_dssp SCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---TC-CCCH
T ss_pred ccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---Cc-cccc
Confidence 11 2479999999985 478999999999999999999999999999999999999999986 2 11 1122
Q ss_pred cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh--c---------------------cccCc
Q 019298 229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF--D---------------------ILGDP 285 (343)
Q Consensus 229 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~--~---------------------~~~~~ 285 (343)
..+ +-.+++.|++|.++.+ .++|+++++ +++++++.... . ..+.+
T Consensus 186 ~~~---~~d~~~~s~~K~l~~~-~g~g~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~ 253 (379)
T 3ke3_A 186 KEL---GIDVLISAPQKGWSST-PCAGLVMLS--------AAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATM 253 (379)
T ss_dssp HHH---TCSEEEECTTTTTCSC-CCEEEEEEC--------HHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCC
T ss_pred ccc---CCCEEEecchhhcCCC-CceEEEEEC--------HHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCC
Confidence 212 2238899999987543 358999885 35666665311 0 01244
Q ss_pred chHHHHHHHhccchhhHH--HHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298 286 ATFIQVCIMYGCLSTIMQ--IMIHGNFLENFAGSCVPSYKLIPELINFKS 333 (343)
Q Consensus 286 ~~~~~~a~~~~~l~~~~~--~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~ 333 (343)
+.....++ .+++....+ +-+.+++++++++.+.+.|+++ |+.+..+
T Consensus 254 ~~~~~~a~-~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~ 301 (379)
T 3ke3_A 254 PTDSLRQF-RDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAA 301 (379)
T ss_dssp CHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBC
T ss_pred CHHHHHHH-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCC
Confidence 55555554 444432222 2237788888999999999888 7775443
No 224
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.80 E-value=2.5e-18 Score=169.69 Aligned_cols=232 Identities=10% Similarity=0.002 Sum_probs=152.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG 158 (343)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 158 (343)
..++++.++++++ . .+.+++++|+++++..++.+++++||+|++++|+|.++...+...|++++.++...+ .
T Consensus 207 v~~~ee~la~l~G------~-d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~ 278 (755)
T 2vyc_A 207 FGESEKYAARVFG------A-DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-R 278 (755)
T ss_dssp HHHHHHHHHHHHT------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-T
T ss_pred HHHHHHHHHHHhC------C-CceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-c
Confidence 3567777777773 2 245788899999999999999999999999999999998888889999998877542 2
Q ss_pred CC----C-----CHHHHHhhhcC--Cc--------eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcc-
Q 019298 159 WE----V-----DLDDIESLADQ--NT--------VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL- 218 (343)
Q Consensus 159 ~~----~-----d~~~l~~~~~~--~~--------~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~- 218 (343)
++ + |+++|++++++ ++ +++++++| ||+|.+. ++++|+++|++|++++++|++|+..
T Consensus 279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~---dl~~I~~ia~~~~~~livDeA~~~~~ 354 (755)
T 2vyc_A 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCY---NAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_dssp TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEE---CHHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceec---CHHHHHHHHHHcCCEEEEECcCchhc
Confidence 33 4 99999998864 33 38889998 7999995 4788899999999999999999854
Q ss_pred ccCCC--CCCcccc--cC-CCCCEEEEccCccccCCCCCc-EEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHH
Q 019298 219 VFGDK--PFVPMGV--FG-STVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVC 292 (343)
Q Consensus 219 ~~~~~--~~~~~~~--~~-~~~~~i~~~S~sK~~~~~G~r-~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a 292 (343)
.+++. +..++.. .+ ...++++++|+||+ ++|.+ .|++.+++.........+.+.+.... +.+++....++
T Consensus 355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~--L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~--s~sp~~~~iaa 430 (755)
T 2vyc_A 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAINFSRFNQAYMMHA--TTSPLYAICAS 430 (755)
T ss_dssp GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTS--SSCCTTCEEEEEECCBTCCCHHHHHHHHHHTS--CSSCCHHHHHH
T ss_pred ccCcccCCcchhcCCcCCccCCCeEEEECcccc--ccCcCCeeeeeecCcccccCHHHHHHHHHHhC--CCCHHHHHHHH
Confidence 23321 1222211 12 23478899999998 45665 56666665310110011222222111 23444444333
Q ss_pred HHhccchhhH-H-HHHHHHHHHHHHHHHHHhhcCCCC
Q 019298 293 IMYGCLSTIM-Q-IMIHGNFLENFAGSCVPSYKLIPE 327 (343)
Q Consensus 293 ~~~~~l~~~~-~-~l~~~~~~~~~~~~~~~~L~~~~g 327 (343)
+ .+++.... + ..+..+++.++.+.+++.|++++|
T Consensus 431 l-~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 431 N-DVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp H-HHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3 33332111 1 122555666666666666666555
No 225
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.77 E-value=1.1e-17 Score=162.76 Aligned_cols=229 Identities=14% Similarity=0.047 Sum_probs=150.7
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC
Q 019298 75 PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154 (343)
Q Consensus 75 ~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 154 (343)
+..-..++++.+|++++. .+.+++++|++.++..++.+++++||+|++++++|.++...+...|+++++++..
T Consensus 193 ~~g~i~eaE~~lA~~fGa-------~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~ 265 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFNA-------DRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPT 265 (715)
T ss_dssp TBTHHHHHHHHHHHHHTC-------SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCC
T ss_pred CcHHHHHHHHHHHHHhCC-------CCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecc
Confidence 334457899999999941 2355667887899999999999999999999999999999999999999998865
Q ss_pred CCCCCCC---------CHHHHHhhhcC--Cce---EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc-
Q 019298 155 PDKGWEV---------DLDDIESLADQ--NTV---ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV- 219 (343)
Q Consensus 155 ~~~~~~~---------d~~~l~~~~~~--~~~---~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~- 219 (343)
. +.+++ |++++++++++ +++ ++++++| ||+|.+++. ++|+++|+++ .+++||||+...
T Consensus 266 ~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl---~~I~ela~~~--~livDEAH~~~~~ 338 (715)
T 3n75_A 266 R-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNT---DFIKKTLDVK--SIHFDSAWVPYTN 338 (715)
T ss_dssp B-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECH---HHHHHHCCCS--EEEEECTTCTTGG
T ss_pred c-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCH---HHHHHHhCcC--cEEEccccccccc
Confidence 4 34543 89999998864 233 7899999 999999765 5666667665 379999998653
Q ss_pred cCCCC--CCcccccC-CCCC-EEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHH
Q 019298 220 FGDKP--FVPMGVFG-STVP-ILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIM 294 (343)
Q Consensus 220 ~~~~~--~~~~~~~~-~~~~-~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~ 294 (343)
+++.. ...+. .. ..+. +++++|+||+++ |+ ..|++.+++.. +.+.+.+...... +.+++....+++
T Consensus 339 f~~~~~~~~al~-~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i----~~~~~~~~~~~~~-STSpsy~~~Asl- 409 (715)
T 3n75_A 339 FSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDV----NEETFNEAYMMHT-TTSPHYGIVAST- 409 (715)
T ss_dssp GSGGGTTSSTTS-SSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCC----CHHHHHHHHHHTS-CSSCCHHHHHHH-
T ss_pred cCCccccccccc-cCcCCCEEEEEEeccccccc--CCCCeeEEEeCchh----hHHHHHHHHHhhc-CCCchHHHHHHH-
Confidence 33221 11111 11 1233 367999999954 43 35888887542 1223333322222 345566555554
Q ss_pred hccchhhH--HHHHHHHHHHHHHHHHHHhhcCCC
Q 019298 295 YGCLSTIM--QIMIHGNFLENFAGSCVPSYKLIP 326 (343)
Q Consensus 295 ~~~l~~~~--~~l~~~~~~~~~~~~~~~~L~~~~ 326 (343)
.+++.... +-.++++++.++.+.+++.|++++
T Consensus 410 daA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~ 443 (715)
T 3n75_A 410 ETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLR 443 (715)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 33332111 112255666666666666666543
No 226
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.77 E-value=7.6e-18 Score=157.24 Aligned_cols=217 Identities=18% Similarity=0.172 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHH-hcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeecC
Q 019298 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMAL-LSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLL 154 (343)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~-l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~ 154 (343)
.++++.+++++ +.+++++++++|++.+...+..+ ..++||+|+++.++|+.+...+ +..|.+++.++.
T Consensus 111 ~~~~~~la~~~------g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~- 183 (438)
T 1wyu_A 111 FEYQTMIAELA------GLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL- 183 (438)
T ss_dssp HHHHHHHHHHH------TSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-
T ss_pred HHHHHHHHHHh------CCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-
Confidence 35555566655 34667889999999443333333 2468999999999999887554 447999998876
Q ss_pred CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccC---CCccccCCCCCCccccc
Q 019298 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV---YGHLVFGDKPFVPMGVF 231 (343)
Q Consensus 155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~a---y~~~~~~~~~~~~~~~~ 231 (343)
+++.+|+++ +++++++|++++| ||||.+. ++++|+++|+++|+++|+|.. ++.+ .. + ..+
T Consensus 184 --~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~---~l~~i~~la~~~g~~vivd~d~~a~g~~-----~~-~-~~~ 246 (438)
T 1wyu_A 184 --EGGRTPLPE----VGEEVGAVVVQNP-NFLGALE---DLGPFAEAAHGAGALFVAVADPLSLGVL-----KP-P-GAY 246 (438)
T ss_dssp --BTTBCCCCC----CCTTEEEEEEESS-CTTSBCC---CHHHHHHHHHHTTCEEEEECCTTGGGTB-----CC-H-HHH
T ss_pred --cCCccCHHH----hCCCeEEEEEECC-CCCeEEe---cHHHHHHHHHHcCCEEEEEechhhccCc-----CC-C-ccC
Confidence 234677766 5667899999999 9999996 578888999999999996632 3221 11 1 222
Q ss_pred CCCCCEEEEccCccccC----CCCCcEEEEEEeCCCCCCCchHHHHHHh----------------------------hhh
Q 019298 232 GSTVPILTLGSLSKRWI----VPGWRLGWFVTTDPCGMFRKPKVVERMK----------------------------KYF 279 (343)
Q Consensus 232 ~~~~~~i~~~S~sK~~~----~~G~r~G~i~~~~~~~~~~~~~~~~~l~----------------------------~~~ 279 (343)
. ..++++| +|.|+ +.|.++||+++++ ++++.+. ...
T Consensus 247 g---~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~--------~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~ 314 (438)
T 1wyu_A 247 G---ADIAVGD-GQSLGLPMGFGGPHFGFLATKK--------AFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAK 314 (438)
T ss_dssp T---CSEEEEE-CTTTTCCCGGGCSCCEEEEECG--------GGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGG
T ss_pred C---CCEEEEC-CcccCCCccCCCCCeeEEEEcH--------HHHHhCCCceeccccccCCCcceeeeccccccccchhc
Confidence 2 2266666 66654 5677999999864 2332221 111
Q ss_pred ccccCc---chHHHHHHHhccch-hhHH-HHHHHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298 280 DILGDP---ATFIQVCIMYGCLS-TIMQ-IMIHGNFLENFAGSCVPSYKLIPELINFKST 334 (343)
Q Consensus 280 ~~~~~~---~~~~~~a~~~~~l~-~~~~-~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~ 334 (343)
. ..+. +.....++ ...+. ...+ +-+..+++.++++++.+.|++++|+.+..+.
T Consensus 315 ~-t~~~~~~~~~~a~~a-a~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 372 (438)
T 1wyu_A 315 A-KSNITTNAQLTALMG-AMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK 372 (438)
T ss_dssp S-SCCCCSCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS
T ss_pred c-cCCccchHHHHHHHH-HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC
Confidence 1 1111 12222111 11121 1122 3337888899999999999999899875553
No 227
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.59 E-value=4.8e-14 Score=127.97 Aligned_cols=254 Identities=13% Similarity=0.013 Sum_probs=162.2
Q ss_pred CCCCCcHHHHHHHHHHHhcCC---CCCC--CC-----CCCCHHHHHHHHHHHhhhCCCCCCC-CcEEE-ecChHHHHHHH
Q 019298 49 SCFHTTHVATEAVAEALLSEK---FNGY--AP-----TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFV-TSGCTQAIDVA 116 (343)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~---~~~Y--~~-----~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~-~~g~~~al~~~ 116 (343)
.-.+.++++.+++.+.+.+.. .+.+ .. ..-..+.|+.+++++ +++. ++|++ |+|+|++++.+
T Consensus 20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~a 93 (377)
T 3e77_A 20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELL------AVPDNYKVIFLQGGGCGQFSAV 93 (377)
T ss_dssp CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHH------TCCTTEEEEEESSHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCCeEEEEcCchHHHHHHH
Confidence 346789999999999875311 1110 00 011245777888888 3443 57888 57899999999
Q ss_pred HHHhcCC--CCeEEEeCCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298 117 MALLSRP--GANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 117 ~~~l~~~--gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~ 192 (343)
+..+..+ ||+|++..-++.+. ...++..|..++.++.+ .++..+++.++..+++++++|.+++..|.||...+.
T Consensus 94 ~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~--~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi 171 (377)
T 3e77_A 94 PLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKL--GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF 171 (377)
T ss_dssp HHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCC--SSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS
T ss_pred HHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccC--CCcCCCCChHHhccCCCccEEEEeCccCchheEchh
Confidence 9999865 89988776655432 23455567766666553 344567777777788889999998888999999875
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc---h
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK---P 269 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~---~ 269 (343)
+|+++|+++++|.+++.. ..+..+..++ +++.|..|.+|.+| +|++.++.+...... +
T Consensus 172 --------i~~~~~~~~~vD~~q~~g----~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p 232 (377)
T 3e77_A 172 --------IPDVKGAVLVCDMSSNFL----SKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECP 232 (377)
T ss_dssp --------CCCCTTCCEEEECTTTTT----SSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSC
T ss_pred --------hhccCCCEEEEEcccccC----CCCCchhhcC-----EEEEecccccCCCc--cEEEEEcHHHHhhccCCCC
Confidence 367899999999999863 2223333322 46788999998778 688877654321100 1
Q ss_pred HHHH--HHhhhhccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhhcCCCCcee
Q 019298 270 KVVE--RMKKYFDILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSYKLIPELIN 330 (343)
Q Consensus 270 ~~~~--~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L~~~~g~~~ 330 (343)
.+.+ ...........++.....++ ..+|+-..+. ++ ..++.++..+++.+.|.++||+.+
T Consensus 233 ~~~~~~~~~~~~~~~~Tp~v~~i~~l-~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~ 297 (377)
T 3e77_A 233 SVLEYKVQAGNSSLYNTPPCFSIYVM-GLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYV 297 (377)
T ss_dssp GGGCHHHHHTTTTCSSCCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEE
T ss_pred chhhHHHHhhcCCCCCCchHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCcee
Confidence 1211 11111111233344333333 4444432222 23 778888999999999999888774
No 228
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.56 E-value=8.5e-14 Score=125.84 Aligned_cols=250 Identities=13% Similarity=0.064 Sum_probs=159.2
Q ss_pred ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCC--CC-----CCCCHHHHHHHHHHHhhhCCCCCC-CCc
Q 019298 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK---FNGY--AP-----TAGLPLTRRAIAEYLSRDLPYKLT-PND 102 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y--~~-----~~g~~~lr~~ia~~~~~~~~~~~~-~~~ 102 (343)
..++++|+-|- .+.++++++++.+.+.+.. .+-| .. ..-..+.|+.+++++ +++ +++
T Consensus 3 ~~~~~~f~pgp------t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll------~~~~~~~ 70 (361)
T 3m5u_A 3 AMRKINFSAGP------STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLY------ELNDDYE 70 (361)
T ss_dssp -CCCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHH------TCCTTEE
T ss_pred ccceEeecCCC------CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHh------CCCCCce
Confidence 34567777765 5678999999998765311 0001 00 012346777788887 343 458
Q ss_pred EEE-ecChHHHHHHHHHHhcCCCCeEE-EeCCCCc-chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEE
Q 019298 103 VFV-TSGCTQAIDVAMALLSRPGANIL-LPRPGFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179 (343)
Q Consensus 103 i~~-~~g~~~al~~~~~~l~~~gd~vl-~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~ 179 (343)
|++ |+|++++++.++..+. +||++. +..-.|. .+...++..|.++..++.+....+.++++. + ++++++++.+
T Consensus 71 v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~ 146 (361)
T 3m5u_A 71 VLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYI 146 (361)
T ss_dssp EEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEE
T ss_pred EEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEE
Confidence 887 9999999999999998 788653 2222232 123345667999999988654322245555 3 7788999999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
++..|.||...+. +++ +|+++++|.++.... .+..+..+ .+++.|..|.+|.+| +|++++
T Consensus 147 ~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~g~----~~id~~~~-----d~~~~s~~K~~gp~G--~g~l~~ 206 (361)
T 3m5u_A 147 CSNNTIYGTQYQN--------YPK-TKTPLIVDASSDFFS----RKVDFSNI-----ALFYGGVQKNAGISG--LSCIFI 206 (361)
T ss_dssp ESEETTTTEECSS--------CCC-CSSCEEEECGGGTTS----SCCCCTTE-----EEEEEETTTTSSCTT--CEEEEE
T ss_pred eCCCCCcceeCCc--------ccc-cCCEEEEEcccccCC----CCCCcccC-----CEEEEechhccCCCc--cEEEEE
Confidence 8888899998762 333 499999999988632 22222222 278889999998777 688877
Q ss_pred eCCCCCCCchHHHHHHhh-----------h--hcc-ccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhh
Q 019298 260 TDPCGMFRKPKVVERMKK-----------Y--FDI-LGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSY 322 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~-----------~--~~~-~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L 322 (343)
+. ++.+++.. . ... ...++.....++ ..+++-..+. ++ ..++.++..+++.+.|
T Consensus 207 ~~--------~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l-~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L 277 (361)
T 3m5u_A 207 RK--------DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMF-NLEMDWLLNQGGLDKVHEKNSQKATMLYECI 277 (361)
T ss_dssp EH--------HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHH-HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cH--------HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 53 45544432 0 111 223343333333 4444432222 33 7788889999999999
Q ss_pred cCCCCc
Q 019298 323 KLIPEL 328 (343)
Q Consensus 323 ~~~~g~ 328 (343)
.+++|+
T Consensus 278 ~~~~g~ 283 (361)
T 3m5u_A 278 DLSNGF 283 (361)
T ss_dssp HTSTTS
T ss_pred HHCCCe
Confidence 998766
No 229
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.53 E-value=6.8e-14 Score=127.64 Aligned_cols=250 Identities=10% Similarity=-0.020 Sum_probs=152.4
Q ss_pred CCCcHHHHHHHHHHHhcCC--------CCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCC-CcEEE-ecChHHHHHHHHH
Q 019298 51 FHTTHVATEAVAEALLSEK--------FNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFV-TSGCTQAIDVAMA 118 (343)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~--------~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~-~~g~~~al~~~~~ 118 (343)
.+.++++++++.+.+.+.. .+...+ ..-..+.|+.+++++ +++. ++|++ |+|+|++++.++.
T Consensus 36 t~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~ai~ 109 (386)
T 3qm2_A 36 AMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL------NIPSNYKVLFCHGGGRGQFAGVPL 109 (386)
T ss_dssp CCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH------TCCTTEEEEEEESCTTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEEcCCchHHHHHHHH
Confidence 4678999999877653210 011111 245678999999999 3433 47888 6899999999999
Q ss_pred HhcCCCCeEEEeCCCCcc--hHHHHHhcCceeEEeecC-CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccc-cCHHH
Q 019298 119 LLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV-YSYQH 194 (343)
Q Consensus 119 ~l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~-~~~~~ 194 (343)
.+.++||+|++..-++.+ +...++..| .+..++.+ ++++..+++++++.++++++++|.+++..|.||.. .+.+
T Consensus 110 ~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~- 187 (386)
T 3qm2_A 110 NLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETP- 187 (386)
T ss_dssp HHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCC-
T ss_pred hccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchh-
Confidence 999999998755444433 233455667 88877765 12333367788888888889999888888899996 4433
Q ss_pred HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC---chHH
Q 019298 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR---KPKV 271 (343)
Q Consensus 195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~---~~~~ 271 (343)
+|. +|+++++|.+++.. ..+..+..++ +.+.|..|.+|.+| +|++.++++..... .+.+
T Consensus 188 --~i~-----~g~~~~vDa~qs~g----~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~ 249 (386)
T 3qm2_A 188 --DFG-----PEVVVTADFSSTIL----SAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSI 249 (386)
T ss_dssp --CCC-----TTCCEEEECTTTTT----SSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGG
T ss_pred --hhc-----CCCEEEEEcccccC----CCCCCccccC-----EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcH
Confidence 332 79999999998862 2333333332 46688999998777 78888875431100 0111
Q ss_pred HH--HHhhhhccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhhcCCCCc
Q 019298 272 VE--RMKKYFDILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSYKLIPEL 328 (343)
Q Consensus 272 ~~--~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L~~~~g~ 328 (343)
.. ...........++.....++ ..+++-..+. ++ ..++.++.++++.+.|.++ |+
T Consensus 250 ~~~~~~~~~~~~~gTp~v~~i~~l-~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~ 309 (386)
T 3qm2_A 250 LDYTVLNDNDSMFNTPPTFAWYLS-GLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DF 309 (386)
T ss_dssp GCHHHHHHC-------CCSHHHHH-HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SS
T ss_pred HHHHHHhhcCCCCCCCcHHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 11 01111111223333333333 3444322232 33 7778888899999999887 54
No 230
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.51 E-value=1.3e-13 Score=125.37 Aligned_cols=223 Identities=13% Similarity=0.045 Sum_probs=139.0
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC----CCeEEEeCCCCcchHHHHHhcCceeEEeecCC-CCC
Q 019298 84 RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP----GANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKG 158 (343)
Q Consensus 84 ~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~----gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~ 158 (343)
..+.+|++. .|.+. ....++++|+|.++..++.+.+++ +|+|++++.+|.+....+...|++.++++... ++.
T Consensus 120 ~l~ld~L~~-~G~~~-~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~ 197 (501)
T 3hl2_A 120 SLVLDIIKL-AGVHT-VANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDE 197 (501)
T ss_dssp HHHHHHHHH-TTCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTE
T ss_pred HHHHHHHHH-cCCCC-CCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccc
Confidence 334455544 45442 246889999997777766666553 49999999999999999999999999887632 235
Q ss_pred CCCCHHHHHhhhcC---CceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc-cCCCCCCcccccCC
Q 019298 159 WEVDLDDIESLADQ---NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGS 233 (343)
Q Consensus 159 ~~~d~~~l~~~~~~---~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~-~~~~~~~~~~~~~~ 233 (343)
.++|++++++++++ +..++++.++ .|-.+.+ +++++|+++|++||+++++|+||+... +...-+.....++.
T Consensus 198 ~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~Gr 274 (501)
T 3hl2_A 198 LRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGR 274 (501)
T ss_dssp EEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSC
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCC
Confidence 77999999999865 2334444444 4544455 679999999999999999999999753 11111111112221
Q ss_pred CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHH-HHHHHhccchh-hHHHHHHHHHH
Q 019298 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFI-QVCIMYGCLST-IMQIMIHGNFL 311 (343)
Q Consensus 234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~a~~~~~l~~-~~~~l~~~~~~ 311 (343)
-.+++.|.+|++..+ .. |.++... ++++++++........+.++.. ..+. ++.- ...|.+..++.
T Consensus 275 --AD~vVqS~HK~llvp-IG-G~ii~~~------d~e~l~~~~~~yPGr~S~Spsldl~~t---LL~lGr~Gy~~ll~e~ 341 (501)
T 3hl2_A 275 --IDAFVQSLDKNFMVP-VG-GAIIAGF------NDSFIQEISKMYPGRASASPSLDVLIT---LLSLGSNGYKKLLKER 341 (501)
T ss_dssp --CCEEEEEHHHHHCCC-SS-CEEEEES------CHHHHHHHHHTSCSCBCSHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred --CcEEEecccccceee-cC-ceEEEeC------CHHHHHHHHHhCCCCCCCcHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 238999999997665 11 4444322 3467777654442222222222 2222 2221 13333455566
Q ss_pred HHHHHHHHHhhcC
Q 019298 312 ENFAGSCVPSYKL 324 (343)
Q Consensus 312 ~~~~~~~~~~L~~ 324 (343)
.++.+++.+.|++
T Consensus 342 ~ela~~L~~~L~~ 354 (501)
T 3hl2_A 342 KEMFSYLSNQIKK 354 (501)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666666666654
No 231
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.51 E-value=1e-12 Score=121.94 Aligned_cols=257 Identities=16% Similarity=0.118 Sum_probs=157.1
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 111 (343)
+++++||+..|.-. ..++ .+|++.++++++++..... ..+.....++.+.+++.+. ..+.+.+++++++
T Consensus 85 dG~~ylD~~~g~~~--~~lGH~hp~v~~Av~~q~~~~~~~-~~~~~~~~~lae~l~~~~p-------~~~~v~f~~SGsE 154 (454)
T 4ao9_A 85 DGHRYADFIAEYTA--GVYGHSAPEIRDAVIEAMQGGINL-TGHNLLEGRLARLICERFP-------QIEQLRFTNSGTE 154 (454)
T ss_dssp TCCEEEESSGGGGT--TTTCSCCHHHHHHHHHHHHTCSCC-CSEESSHHHHHHHHHHHST-------TCSEEEEESSHHH
T ss_pred CCCEEEEccccHHh--hcccCCCHHHHHHHHHHHhcCCCc-cCCcHHHHHHHHHHHHhCC-------CCCEEEEeCchHH
Confidence 38899999877633 1234 7899999999998764321 2223344566677766652 4689999999999
Q ss_pred HHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc------CceeEEeecCCCCCCCCCHHHHHhhhcCC--ceEEEEeC
Q 019298 112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFR------HIEVRHFDLLPDKGWEVDLDDIESLADQN--TVALVIIN 181 (343)
Q Consensus 112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~d~~~l~~~~~~~--~~~i~~~~ 181 (343)
|...+++.... ..++|+..+-+|.+........ ..+...++. -|++.+++.+... ..+.++..
T Consensus 155 A~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIvE 227 (454)
T 4ao9_A 155 ANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLVE 227 (454)
T ss_dssp HHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEEC
T ss_pred HHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEec
Confidence 99999987642 3368888888887643211110 111222221 2688888877532 23445556
Q ss_pred C-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298 182 P-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 182 p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~ 259 (343)
| ....|.+ .+++.+++|.++|++||+++|+||++.+ . .+.. .....++-.+. ++ +++|.++ .|+.+|.+++
T Consensus 228 Pv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R-~G~~-~a~e~~gv~PD-i~--t~gK~lg-gG~Piga~~~ 300 (454)
T 4ao9_A 228 PMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-R-LAPH-GLANKLGIRSD-LT--TLGKYIG-GGMSFGAFGG 300 (454)
T ss_dssp SEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-G-GSTT-CHHHHHTCCCS-EE--EEEGGGG-TTSSCEEEEE
T ss_pred cccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-C-Cccc-cchhccCCCCc-EE--EeccccC-CCCcceeeee
Confidence 6 5566766 5678899999999999999999999974 1 1211 11111222222 33 5789964 6789999988
Q ss_pred eCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 019298 260 TDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYK 323 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~ 323 (343)
+ .++.+.+... ...+++.++++.+++ .+.|+...+ -+..++++++.+++.+.|+
T Consensus 301 ~--------~ei~~~~~~~~~~~~h~~T~~gnPla~AAa-la~L~~l~~-~~~~~~~~~~g~~l~~~L~ 359 (454)
T 4ao9_A 301 R--------ADVMALFDPRTGPLAHSGTFNNNVMTMAAG-YAGLTKLFT-PEAAGALAERGEALRARLN 359 (454)
T ss_dssp C--------HHHHGGGCTTTCSCCCCCTTTTCHHHHHHH-HHHHHHTSC-HHHHHHHHHHHHHHHHHHH
T ss_pred H--------HHHHHHHhhccCCccccCCCCCCHHHHHHH-HHHHHHHhc-cChhHHHHHHHHHHHHHHH
Confidence 5 3566655432 222456678877776 444432100 0144445555555555444
No 232
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.49 E-value=2e-13 Score=125.52 Aligned_cols=186 Identities=13% Similarity=0.071 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC----CCCeEEEeCCCCcchHHHHHhcCceeEEeecCC
Q 019298 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----PGANILLPRPGFPIYELSAAFRHIEVRHFDLLP 155 (343)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 155 (343)
..+.+.+..++.+..|.+ .....++++|+|.++..++.+.++ +++.|++++-+|.+....+...|++.+.++..+
T Consensus 97 ~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~ 175 (450)
T 3bc8_A 97 NKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVL 175 (450)
T ss_dssp HHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeee
Confidence 346666777766655643 223458888887444444434433 379999999999999999999999988886532
Q ss_pred -CCCCCCCHHHHHhhhcC---CceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC-ccc
Q 019298 156 -DKGWEVDLDDIESLADQ---NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMG 229 (343)
Q Consensus 156 -~~~~~~d~~~l~~~~~~---~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~-~~~ 229 (343)
++...+|++++++++.+ +.+.+++.+| .+.+|.+ +++++|+++|++||+++++|+||+.....-...+ ...
T Consensus 176 ~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~ 252 (450)
T 3bc8_A 176 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA 252 (450)
T ss_dssp ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred cCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHh
Confidence 23578999999999965 2456666677 4556777 7899999999999999999999997432111000 111
Q ss_pred ccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298 230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF 279 (343)
Q Consensus 230 ~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~ 279 (343)
... .-.+++.|++|++..+ ...+++... |++..+++....
T Consensus 253 ~~~--~AD~~v~S~HK~l~a~-~~~~~l~~r-------d~~~~~~~~~~~ 292 (450)
T 3bc8_A 253 RVG--RIDAFVQSLDKNFMVP-VGGAIIAGF-------NEPFIQDISKMY 292 (450)
T ss_dssp HHS--CCCEEEEEHHHHHSCC-SSCEEEEES-------CHHHHHHHHHHS
T ss_pred ccc--CCCEEEECCccCCCch-hccEEEEec-------CHHHHHHHHHHh
Confidence 111 1237889999995443 335666553 345666665443
No 233
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.42 E-value=3.7e-11 Score=109.00 Aligned_cols=287 Identities=14% Similarity=0.049 Sum_probs=162.8
Q ss_pred cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---C---CHHHHHHHHHHHhhhCCCCCCCC--cEEEe
Q 019298 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---G---LPLTRRAIAEYLSRDLPYKLTPN--DVFVT 106 (343)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g---~~~lr~~ia~~~~~~~~~~~~~~--~i~~~ 106 (343)
..-|+|--.+ .-.++.+++++-..+.+.-..+||-.. | ..+++....+..++.||.....- ||-.-
T Consensus 54 ~~~ieLIASE------N~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~ 127 (490)
T 3ou5_A 54 CRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY 127 (490)
T ss_dssp HHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred HcCceEecCC------CcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcC
Confidence 3446665554 246788888877776654444444311 1 23444444445555555332211 44444
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH--------HHhcCc--eeEEeecCCCCCCCCCHHHHHhhhcC-Cce
Q 019298 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELS--------AAFRHI--EVRHFDLLPDKGWEVDLDDIESLADQ-NTV 175 (343)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~--------~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~ 175 (343)
+++.|...++.+|++|||+|+-.+..+++...- ....|. +...+.++++ +..+|.|++++.... +|+
T Consensus 128 -SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~-t~~IDyd~~~~~A~~~kPk 205 (490)
T 3ou5_A 128 -SGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLFRPR 205 (490)
T ss_dssp -SHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETT-TTEECHHHHHHHHHHHCCS
T ss_pred -CHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCC-CCcccHHHHHHHHhhcCCC
Confidence 457788888999999999999888877654221 111222 3445555543 457999999987654 788
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (343)
Q Consensus 176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~ 254 (343)
+|++....+|-= + +++++.++|.+-|.++++|.+|.. ++-++.-+.++.. .+ ++..|++|+ +.|.|-
T Consensus 206 lIi~G~SaY~r~--i---d~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-AD----vVTtTTHKT--LrGPrG 273 (490)
T 3ou5_A 206 LIIAGTSAYARL--I---DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-AD----IVTTTTHKT--LRGARS 273 (490)
T ss_dssp EEEECCSSCCSC--C---CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CS----EEEEESSST--TCSCSC
T ss_pred eEEECCccCccc--c---CHHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc-ce----EEecccccc--ccCCCc
Confidence 877655455533 2 356677777799999999999984 4445543444432 22 889999999 688899
Q ss_pred EEEEEeCCCCCC----C---chHHHHHHhhhh-cc-ccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhc
Q 019298 255 GWFVTTDPCGMF----R---KPKVVERMKKYF-DI-LGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYK 323 (343)
Q Consensus 255 G~i~~~~~~~~~----~---~~~~~~~l~~~~-~~-~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~ 323 (343)
|.|++.++..-. . ..++.+++.... .. .+++-...-++. ..++.+ ..++.+..+++.++.+.|.+.|.
T Consensus 274 G~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAk-AVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~ 352 (490)
T 3ou5_A 274 GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAV-AVALKQACTPMFREYSLQVLKNARAMADALL 352 (490)
T ss_dssp EEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHH-HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH
Confidence 999986531000 0 003455555442 21 223333322333 222221 24555688889999999999999
Q ss_pred CCCCceee-CCCCceEeeecC
Q 019298 324 LIPELINF-KSTGSSLKYLDL 343 (343)
Q Consensus 324 ~~~g~~~~-~~~~g~~~~~~l 343 (343)
+. |+.++ .......+++|+
T Consensus 353 ~~-G~~vvsGgTdnHlvLvDl 372 (490)
T 3ou5_A 353 ER-GYSLVSGGTDNHLVLVDL 372 (490)
T ss_dssp HT-TCEEGGGSCSSSEEEEEC
T ss_pred hC-CCeeecCCCCceEEEEec
Confidence 87 88843 445556666554
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.42 E-value=1.8e-11 Score=113.89 Aligned_cols=243 Identities=13% Similarity=0.069 Sum_probs=146.3
Q ss_pred ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CC-CCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEEEecCh
Q 019298 34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NG-YAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTSGC 109 (343)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~-Y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~g~ 109 (343)
++.++|+..|.-. ..++ .+|++.+++++++..... .. +.+.....+|-+.+++.. +. ..+.+++++++
T Consensus 63 G~~ylD~~~g~~~--~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~------p~~~~~~v~f~~sG 134 (456)
T 4atq_A 63 GNSFIDLGSGIAV--TSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLT------PGDHAKRTVLFNSG 134 (456)
T ss_dssp SCEEEESSHHHHT--CTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHS------SCSSCEEEEEESSH
T ss_pred CCEEEEccccHHH--HhcCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhC------CCCCCcEEEEeCCh
Confidence 8888999877522 1233 789999999998875321 11 112212233444444444 21 24578999999
Q ss_pred HHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCC----CCCCCCCHHHHHhh
Q 019298 110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLP----DKGWEVDLDDIESL 169 (343)
Q Consensus 110 ~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~----~~~~~~d~~~l~~~ 169 (343)
++|++.+++... ....+|+...-+|++....+... +. .+..++... .....-+.+.+++.
T Consensus 135 sEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 214 (456)
T 4atq_A 135 AEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRA 214 (456)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHH
Confidence 999999998753 23468888888887765433222 11 223333211 00111123333322
Q ss_pred -------hcCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298 170 -------ADQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (343)
Q Consensus 170 -------~~~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (343)
+..+..+.++.-| ....|.+ .+++.+++|.++|++||+++|.||++.++...+.- .....++-.++ |+
T Consensus 215 ~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~-~a~e~~gv~PD-iv- 291 (456)
T 4atq_A 215 ITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEW-FAVDHEGVVPD-II- 291 (456)
T ss_dssp HHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTCCCS-EE-
T ss_pred HHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCcccc-ccccccCCCCc-hh-
Confidence 2233445566666 5556765 56789999999999999999999999997655542 22222332223 43
Q ss_pred ccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccc
Q 019298 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCL 298 (343)
Q Consensus 241 ~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l 298 (343)
+++|.+ ..|+.+|.+++.. ++.+.+.... ..+++.++++.+++ .+.|
T Consensus 292 -t~gK~l-ggg~P~~av~~~~--------~i~~~~~~~~~~~Tf~gnpla~aaa-la~L 339 (456)
T 4atq_A 292 -TMAKGI-AGGLPLSAITGRA--------DLLDAVHPGGLGGTYGGNPVACAAA-LAAI 339 (456)
T ss_dssp -EECGGG-GTTSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHH-HHHH
T ss_pred -hhhhcc-cCcCCceeeEecH--------HHHhcccccCCCCCCCCChHHHHhh-HHHH
Confidence 457995 4789999999853 5555554332 33667788877777 4443
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.41 E-value=2e-11 Score=114.01 Aligned_cols=270 Identities=14% Similarity=0.093 Sum_probs=159.4
Q ss_pred cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCC-CHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAG-LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g-~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 110 (343)
++++++|+..|.-.. .++ .+|++.++++++++... .|....+ ..+....+|+.+.+.. +.+.++|+++++++
T Consensus 65 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~--p~~~~~v~f~~sGs 138 (473)
T 4e3q_A 65 NGRRYLDANSGLWNM--VAGFDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVS--PFDSGRVFYTNSGS 138 (473)
T ss_dssp TCCEEEETTTTTTTC--TTCSCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHS--SCSSCEEEEESSHH
T ss_pred CCCEEEEcccCHHHh--hccCCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhC--CCCccEEEEeCchH
Confidence 388899998886332 233 68999999999987532 1221111 1233334444443322 33457999999999
Q ss_pred HHHHHHHHHhc-------CC-CCeEEEeCCCCcchHHHHHh-cCc-----------eeEEeecCCC---CCCCCC-----
Q 019298 111 QAIDVAMALLS-------RP-GANILLPRPGFPIYELSAAF-RHI-----------EVRHFDLLPD---KGWEVD----- 162 (343)
Q Consensus 111 ~al~~~~~~l~-------~~-gd~vl~~~p~~~~~~~~~~~-~g~-----------~~~~~~~~~~---~~~~~d----- 162 (343)
+|++.+++... ++ ..+|+...-+|.+....+.. .|. ....++.... ......
T Consensus 139 EA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 218 (473)
T 4e3q_A 139 EANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFV 218 (473)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHH
Confidence 99999998753 12 25788888888765443322 221 1122211100 000011
Q ss_pred ---HHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298 163 ---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (343)
Q Consensus 163 ---~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~ 234 (343)
.+++++.+. .+..+.++.-| ..-.|.+ .+++.+++|.++|++||+++|.||+..+|...+.-. ....++-.
T Consensus 219 ~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~ 297 (473)
T 4e3q_A 219 ARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTW-GCVTYDFT 297 (473)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSC-HHHHTTCC
T ss_pred HHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchh-HHHhcCCC
Confidence 233444432 23445566666 5566766 566899999999999999999999999986555422 22222222
Q ss_pred CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHHHH
Q 019298 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQIMI 306 (343)
Q Consensus 235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~l~ 306 (343)
+.++ +++|.++..++.+|.+++++ ++.+.+... ...+++.++++.+++ .+.|+ .+.+
T Consensus 298 PDi~---t~~K~l~gG~~Pl~av~~~~--------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaa-la~L~---~i~~ 362 (473)
T 4e3q_A 298 PDAI---ISSKNLTAGFFPMGAVILGP--------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIA-LKAID---VVMN 362 (473)
T ss_dssp CSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHH-HHHHH---HHHH
T ss_pred CChH---HhcccccCCCCCcccccccH--------HHHHHhccccccccccccCCCCCCCcchhhhh-hhhhh---hhcc
Confidence 2333 46899765559999999853 676666432 223556677777776 33332 2222
Q ss_pred --HHHHHHHHHHHHHHhhcC
Q 019298 307 --HGNFLENFAGSCVPSYKL 324 (343)
Q Consensus 307 --~~~~~~~~~~~~~~~L~~ 324 (343)
..++.++.-+++.+.|++
T Consensus 363 ~~l~~~~~~~g~~l~~~L~~ 382 (473)
T 4e3q_A 363 EGLAENVRRLAPRFEERLKH 382 (473)
T ss_dssp SSHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHH
Confidence 556666666666666554
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.29 E-value=2.3e-11 Score=121.13 Aligned_cols=243 Identities=13% Similarity=0.045 Sum_probs=144.5
Q ss_pred ceeEeccCCCCCCCCCC-C-cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChHHH
Q 019298 36 KVISLAMGDPTVHSCFH-T-THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQA 112 (343)
Q Consensus 36 ~~i~l~~g~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a 112 (343)
+++|+..|.-. .+++ . +|++.+++++++..-....+. ....+....+++.+.+.. +-. .+++++++++++|
T Consensus 381 ~ylD~~sg~~~--~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~--~~~~~~~~~Lae~L~~~~--p~~~l~~vff~~SGSeA 454 (831)
T 4a0g_A 381 QQFDACASWWT--QGPDPTFQAELAREMGYTAARFGHVMFP--ENVYEPALKCAELLLDGV--GKGWASRVYFSDNGSTA 454 (831)
T ss_dssp EEEETTHHHHT--CCCCHHHHHHHHHHHHHHHHHHSSCCCT--TEECHHHHHHHHHHHHTT--TTTTCCEEEEESSHHHH
T ss_pred heeeecccHhh--cCCCCCCCHHHHHHHHHHHhhccccccc--ccCCHHHHHHHHHHHHhC--CCCCCCEEEECCChhHH
Confidence 67888877422 2244 4 899999999988752111111 111233334455444322 112 4689999999999
Q ss_pred HHHHHHHhc-----CC------------CCeEEEeCCCCcchHHH-HHhcCce---------------e-----------
Q 019298 113 IDVAMALLS-----RP------------GANILLPRPGFPIYELS-AAFRHIE---------------V----------- 148 (343)
Q Consensus 113 l~~~~~~l~-----~~------------gd~vl~~~p~~~~~~~~-~~~~g~~---------------~----------- 148 (343)
++.+++... .. ..+|+..+-+|++-... ....|.. .
T Consensus 455 ~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 534 (831)
T 4a0g_A 455 IEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSN 534 (831)
T ss_dssp HHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEET
T ss_pred HHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccC
Confidence 999988762 12 23688888888654333 3332311 0
Q ss_pred --EEeecCCC------CCCC-CC------------------HHHHHhhhc-------CCceEEEEeCC--CCCcccc-cC
Q 019298 149 --RHFDLLPD------KGWE-VD------------------LDDIESLAD-------QNTVALVIINP--GNPCGNV-YS 191 (343)
Q Consensus 149 --~~~~~~~~------~~~~-~d------------------~~~l~~~~~-------~~~~~i~~~~p--~nptG~~-~~ 191 (343)
..++.... +... -+ .+.|++.+. ....+.++.-| ++..|.. .+
T Consensus 535 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~ 614 (831)
T 4a0g_A 535 GSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVD 614 (831)
T ss_dssp TEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEEC
T ss_pred CceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCC
Confidence 00111100 0000 01 245666654 23344455556 6888877 48
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchH
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPK 270 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~ 270 (343)
.+.+++|.++|++||+++|+||++.++...+... ....++-.++++ +++|.++. | +++|++++++ +
T Consensus 615 ~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~~--------~ 681 (831)
T 4a0g_A 615 PLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLATD--------A 681 (831)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEECH--------H
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEECH--------H
Confidence 8899999999999999999999999987666533 222222222333 68999765 6 8999999963 6
Q ss_pred HHHHHhhh-------hccccCcchHHHHHHHhccc
Q 019298 271 VVERMKKY-------FDILGDPATFIQVCIMYGCL 298 (343)
Q Consensus 271 ~~~~l~~~-------~~~~~~~~~~~~~a~~~~~l 298 (343)
+.+.+... ...+++.++++.+++ .+.|
T Consensus 682 i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaa-la~L 715 (831)
T 4a0g_A 682 VFDSFSGDSKLKALLHGHSYSAHAMGCATA-AKAI 715 (831)
T ss_dssp HHHTTCSSCGGGSCCCCCTTTTCHHHHHHH-HHHH
T ss_pred HHHHHhcccccccceeecCCcccHHHHHHH-HHHH
Confidence 77766532 223556788887777 4443
No 237
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=84.79 E-value=6 Score=36.94 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=70.0
Q ss_pred CCCCCCCCcEEEecChHHHHHHHHHHhc---CC---------C-C-----eEEEeCCCCcc-------------------
Q 019298 94 LPYKLTPNDVFVTSGCTQAIDVAMALLS---RP---------G-A-----NILLPRPGFPI------------------- 136 (343)
Q Consensus 94 ~~~~~~~~~i~~~~g~~~al~~~~~~l~---~~---------g-d-----~vl~~~p~~~~------------------- 136 (343)
|...++++.|.++.++..++...+++|. .. | . ..+...|.|..
T Consensus 124 Y~L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~ 203 (525)
T 3gh5_A 124 YDLITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKR 203 (525)
T ss_dssp EEEEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHH
T ss_pred eEEEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHH
Confidence 3345677888888877777666666652 11 1 1 24566777642
Q ss_pred hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 137 YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 137 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
+.+....+++++..+.+.++.+|.+.++.+-+.-..... .......|-.++++|+++|++.|+++++-||-
T Consensus 204 ~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 204 QIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 234455567777777776666676665543332111110 00122346789999999999999999988775
No 238
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=84.42 E-value=7.1 Score=33.03 Aligned_cols=97 Identities=9% Similarity=0.093 Sum_probs=58.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----Cce
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTV 175 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~ 175 (343)
.-+++|.|++..=..+.+.|.+.|..|++..-.-......++..|.+...+..+-. |.+++++.++. ..-
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSA-----NLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHSCE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 34455555554445556667889988888765555556666667777777765432 45555554432 333
Q ss_pred EEEEeCC-CCCccc--ccCHHHHHHHHHHH
Q 019298 176 ALVIINP-GNPCGN--VYSYQHLQKLAETA 202 (343)
Q Consensus 176 ~i~~~~p-~nptG~--~~~~~~l~~l~~~~ 202 (343)
-++++|. .++.+- .++.++|+++.++-
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 4555655 333332 36788998888764
No 239
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=78.13 E-value=17 Score=29.78 Aligned_cols=95 Identities=17% Similarity=0.090 Sum_probs=52.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 174 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.++. +.
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 81 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI-----SDPGSVKALFAEIQALTGGI 81 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHHCCCC
Confidence 3455555555444555666778898888876555444555555566666665432 245555554432 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 019298 175 VALVIINPGNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 175 ~~i~~~~p~nptG~--~~~~~~l~~l~~ 200 (343)
..++.+-...+.+. ..+.+++++..+
T Consensus 82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 82 DILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 44443333333322 356677766554
No 240
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=76.31 E-value=12 Score=34.85 Aligned_cols=111 Identities=20% Similarity=0.297 Sum_probs=64.0
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhc---CC---------C-----CeEEEeCCCCcc-------------------hHHH
Q 019298 97 KLTPNDVFVTSGCTQAIDVAMALLS---RP---------G-----ANILLPRPGFPI-------------------YELS 140 (343)
Q Consensus 97 ~~~~~~i~~~~g~~~al~~~~~~l~---~~---------g-----d~vl~~~p~~~~-------------------~~~~ 140 (343)
.++.+.|.++.++..++...+++|. .. + ...+...|.|.- +.+.
T Consensus 103 ~v~~~~i~I~a~~~~G~~~g~qTL~Ql~~~~~~~~~~~~~~~~lp~~~I~D~Prf~~RG~mLD~aR~f~~~~~ik~~id~ 182 (512)
T 1jak_A 103 DSGPAGVTITARKAAGLFHGVQTLRQLLPPAVEKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVKRYIDR 182 (512)
T ss_dssp EEETTEEEEEESSHHHHHHHHHHHHHHSCGGGGCSSCCCCCCEECCEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHH
T ss_pred EEeCCEEEEEEcCHHHHHHHHHHHHHHhhhhhcccccccCcccccceEEeecCCCCccceeeccCCCCCCHHHHHHHHHH
Confidence 4556778887776666655555552 11 1 123555666632 2333
Q ss_pred HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 141 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
...+++++..+.+..+.+|.+.++.+-+.-..... .......|-.++++++++|++.|+++++-||-
T Consensus 183 ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga~----~~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 183 VARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGS----TEVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp HHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCCcEEEEEeccCCCceehhhhhHHHHhhcCc----cccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 44456666666665555566654433322111100 01112336789999999999999999998885
No 241
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=74.50 E-value=12 Score=34.84 Aligned_cols=107 Identities=19% Similarity=0.264 Sum_probs=63.0
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhcC----C--C-----CeEEEeCCCCcc-------------------hHHHHHhcCc
Q 019298 97 KLTPNDVFVTSGCTQAIDVAMALLSR----P--G-----ANILLPRPGFPI-------------------YELSAAFRHI 146 (343)
Q Consensus 97 ~~~~~~i~~~~g~~~al~~~~~~l~~----~--g-----d~vl~~~p~~~~-------------------~~~~~~~~g~ 146 (343)
.++.+.|.++.++..++...+++|.+ . | ...+...|.|.. +.+....+++
T Consensus 97 ~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~Kl 176 (507)
T 2gjx_A 97 TINDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKL 176 (507)
T ss_dssp EESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHTTC
T ss_pred EEeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHhCC
Confidence 35566788887776666666666531 1 2 123455666632 2334445566
Q ss_pred eeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 147 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
++..+.+..+.+|.+.++.+-+.-... ...|.+..++++++++|++.|+++++-||-
T Consensus 177 N~lh~HltDdq~wr~ei~~~P~Lt~~G--------a~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 177 NVFHWHLVDDPSFPYESFTFPELMRKG--------SYNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp CEEEEECCCSSCCCBCCSSCTHHHHHH--------SSCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEecccCeeeeccccchhhhcc--------ccCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 666666655555655433222111000 012446679999999999999999988875
No 242
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=73.89 E-value=24 Score=28.99 Aligned_cols=94 Identities=16% Similarity=0.063 Sum_probs=43.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 174 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.++. +.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 82 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADV-----TNEADATAALAFAKQEFGHV 82 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3455555555444555666778888887765444444444444455555555432 245555554432 34
Q ss_pred eEEEEeCC-CCCccc------ccCHHHHHHHHH
Q 019298 175 VALVIINP-GNPCGN------VYSYQHLQKLAE 200 (343)
Q Consensus 175 ~~i~~~~p-~nptG~------~~~~~~l~~l~~ 200 (343)
..+ +++. ..+.+. ..+.+++++..+
T Consensus 83 d~l-v~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
T 3tpc_A 83 HGL-VNCAGTAPGEKILGRSGPHALDSFARTVA 114 (257)
T ss_dssp CEE-EECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred CEE-EECCCCCCCCccccccccCCHHHHHHHHH
Confidence 444 4444 222221 345677766554
No 243
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=73.89 E-value=20 Score=25.97 Aligned_cols=103 Identities=12% Similarity=-0.031 Sum_probs=59.5
Q ss_pred cEEEecChHHHHHHHHH---HhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298 102 DVFVTSGCTQAIDVAMA---LLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~---~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 176 (343)
+++....+...+..++- .+.+ .+..|+...|.+..+.......|++...+-.-...+-.=.+..+|++++.+...
T Consensus 6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~ 85 (119)
T 1ofu_X 6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH 85 (119)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEE
T ss_pred EEeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCcc
Confidence 34444444444444433 3443 445666677777778888888887643322111111111256678888887777
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEE
Q 019298 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209 (343)
Q Consensus 177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~ 209 (343)
.++..... ++..+.++|--.+++.+...
T Consensus 86 aVl~wl~~-----l~~~~~RRLqlAA~~g~~~~ 113 (119)
T 1ofu_X 86 TVVSWLEP-----LSRAARKQLSRAAQLGQAQS 113 (119)
T ss_dssp EEEECCSS-----CCHHHHHHHHHHHHHHTCEE
T ss_pred EEEECCCc-----CChHHHHHHHHHHHhCCCeE
Confidence 77766432 56678888887777766553
No 244
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=73.48 E-value=26 Score=29.35 Aligned_cols=95 Identities=15% Similarity=0.073 Sum_probs=50.9
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 174 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.+.. +.
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDV-----SSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3455555554444555666778898888776544444444555566666665543 245565554432 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 019298 175 VALVIINPGNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 175 ~~i~~~~p~nptG~--~~~~~~l~~l~~ 200 (343)
..++.+....+.+. ..+.++++++.+
T Consensus 103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 103 DVLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 44443332232232 356677775544
No 245
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=72.71 E-value=18 Score=30.04 Aligned_cols=97 Identities=9% Similarity=-0.003 Sum_probs=54.2
Q ss_pred CcEEEecChHHHH-HHHHHHhcCCCCeEEEeCCCC-cchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEE
Q 019298 101 NDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGF-PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV 178 (343)
Q Consensus 101 ~~i~~~~g~~~al-~~~~~~l~~~gd~vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 178 (343)
.++++.+|++.+| ..+.+.|.+.|-.|++.+-.- ......+...|.++..+..+-. |.+..++.+....--++
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTTTCCCEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHhCCCCEE
Confidence 3455555554444 455566778888777654322 2334455667777777766533 23334444444443456
Q ss_pred EeCCC-CCcc--cccCHHHHHHHHHHH
Q 019298 179 IINPG-NPCG--NVYSYQHLQKLAETA 202 (343)
Q Consensus 179 ~~~p~-nptG--~~~~~~~l~~l~~~~ 202 (343)
++|.. .+.+ ..++.++|+++.++-
T Consensus 84 VNNAGi~~~~~~~~~~~~~w~~~~~vN 110 (247)
T 4hp8_A 84 VNNAGIIRRADSVEFSELDWDEVMDVN 110 (247)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred EECCCCCCCCCcccccHHHHHHHHHHH
Confidence 66652 2222 236888998887753
No 246
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=72.17 E-value=31 Score=28.68 Aligned_cols=98 Identities=17% Similarity=0.079 Sum_probs=52.9
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---
Q 019298 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--- 172 (343)
Q Consensus 99 ~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--- 172 (343)
+-..+++|.|++..=..+.+.|.+.|..|++..-.-...... +...|.++..+..+-. |.+++++.++.
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT-----DELAIEAAFSKLDA 82 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-----CHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHHHHHH
Confidence 333445555555444555666788998888876543332222 2344667776655432 45555554432
Q ss_pred --CceEEEEeCC-CCCccc--ccCHHHHHHHHHH
Q 019298 173 --NTVALVIINP-GNPCGN--VYSYQHLQKLAET 201 (343)
Q Consensus 173 --~~~~i~~~~p-~nptG~--~~~~~~l~~l~~~ 201 (343)
..--++++|. .++.+- .++.++|+++.++
T Consensus 83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 2333455655 233332 2677888877664
No 247
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=71.55 E-value=30 Score=28.47 Aligned_cols=95 Identities=13% Similarity=0.001 Sum_probs=50.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 174 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.+.. +.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDV-----TRQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHSSSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4556665555544556667778898887765544444444455555555555432 245555554432 34
Q ss_pred eEEEEeCCCCCcc--cccCHHHHHHHHH
Q 019298 175 VALVIINPGNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 175 ~~i~~~~p~nptG--~~~~~~~l~~l~~ 200 (343)
..++.+....+.+ ...+.+++++..+
T Consensus 84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 84 DILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 4444333222222 2346677765443
No 248
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=71.35 E-value=42 Score=27.79 Aligned_cols=94 Identities=15% Similarity=0.033 Sum_probs=51.0
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 174 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.++. +.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 86 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDL-----TNEVSVRALIDFTIDTFGRL 86 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3455555554444555666778888887776555555555555566666655432 245555554432 34
Q ss_pred eEEEEeCCC-C-C-cc--cccCHHHHHHHHH
Q 019298 175 VALVIINPG-N-P-CG--NVYSYQHLQKLAE 200 (343)
Q Consensus 175 ~~i~~~~p~-n-p-tG--~~~~~~~l~~l~~ 200 (343)
..+ +++.. . + .+ ..++.+++++..+
T Consensus 87 d~l-v~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 87 DIV-DNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp CEE-EECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred CEE-EECCCCCCCCCCccccCCHHHHHHHHH
Confidence 444 44442 2 2 11 1346676665443
No 249
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=71.20 E-value=28 Score=28.99 Aligned_cols=65 Identities=12% Similarity=-0.016 Sum_probs=37.3
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
.+++|.|+...=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.+.
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~~~~~~~ 71 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDV-----TDGERIDVVAA 71 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCT-----TCHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeC-----CCHHHHHHHHH
Confidence 344544444444455566778888888776555555556565565666665532 24555555443
No 250
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=70.21 E-value=13 Score=31.38 Aligned_cols=78 Identities=22% Similarity=0.172 Sum_probs=44.7
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC-ceEEE
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN-TVALV 178 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~-~~~i~ 178 (343)
...+++|.|+...=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.+..- ..-++
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~~iD~l 90 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDL-----QDLSSVRRFADGVSGADVL 90 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCT-----TCHHHHHHHHHTCCCEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCC-----CCHHHHHHHHHhcCCCCEE
Confidence 34556665555544556666778888888765544444444455566666666543 2567777766541 22344
Q ss_pred EeCC
Q 019298 179 IINP 182 (343)
Q Consensus 179 ~~~p 182 (343)
+++.
T Consensus 91 v~nA 94 (291)
T 3rd5_A 91 INNA 94 (291)
T ss_dssp EECC
T ss_pred EECC
Confidence 4444
No 251
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=69.99 E-value=23 Score=29.63 Aligned_cols=94 Identities=13% Similarity=0.057 Sum_probs=48.8
Q ss_pred cEEEecChHHHH-HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298 102 DVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (343)
Q Consensus 102 ~i~~~~g~~~al-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 174 (343)
.+++.+|++.+| ..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.++. +.
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 104 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDV-----SDEQQIIAMVDACVAAFGGV 104 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCT-----TCHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 444444444444 445566778888888765544444445555566666665543 245555554432 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 019298 175 VALVIINPGNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 175 ~~i~~~~p~nptG~--~~~~~~l~~l~~ 200 (343)
..++-+....+.+. ..+.+++++..+
T Consensus 105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~ 132 (277)
T 3gvc_A 105 DKLVANAGVVHLASLIDTTVEDFDRVIA 132 (277)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 44443322222222 356677766543
No 252
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=69.88 E-value=30 Score=28.75 Aligned_cols=96 Identities=11% Similarity=0.058 Sum_probs=53.4
Q ss_pred CcEEEecChHHHH-HHHHHHhcCCCCeEEEeCCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 101 NDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al-~~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
+.+++.+|++.+| ..+.+.|.+.|..|++.+-.-...... ++..|.++..+..+-. |.+++++.++.
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt-----~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS-----KKKDVEEFVRRTFET 81 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 3455444554444 445556778898888765544333332 3345777777766432 45666554432
Q ss_pred -CceEEEEeCCC--CCcc--cccCHHHHHHHHHH
Q 019298 173 -NTVALVIINPG--NPCG--NVYSYQHLQKLAET 201 (343)
Q Consensus 173 -~~~~i~~~~p~--nptG--~~~~~~~l~~l~~~ 201 (343)
..--++++|.. .+.+ ..++.++|+++.++
T Consensus 82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 23335566653 3333 24688888876654
No 253
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=69.79 E-value=25 Score=29.28 Aligned_cols=66 Identities=20% Similarity=0.059 Sum_probs=38.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.++
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 93 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL-----SDRKSIKQLAE 93 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeec-----CCHHHHHHHHH
Confidence 4455555554444555666778888887765544444455555666776666543 24555555443
No 254
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=69.32 E-value=35 Score=28.04 Aligned_cols=97 Identities=18% Similarity=0.107 Sum_probs=52.7
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----Cc
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NT 174 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~ 174 (343)
...+++|.|++..=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.+.. ..
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 82 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDI-----ADLNEIAVLGAAAGQTLGA 82 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccC-----CCHHHHHHHHHHHHHHhCC
Confidence 34556666555555556667778898888776544444444445556666665543 245555544321 23
Q ss_pred eEEEEeCCC-CCccc--ccCHHHHHHHHHH
Q 019298 175 VALVIINPG-NPCGN--VYSYQHLQKLAET 201 (343)
Q Consensus 175 ~~i~~~~p~-nptG~--~~~~~~l~~l~~~ 201 (343)
.-+++++.. .+.+. ..+.+++++..+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 83 IDLLHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp EEEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 334455442 22222 2467777766553
No 255
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=69.08 E-value=10 Score=35.60 Aligned_cols=116 Identities=18% Similarity=0.308 Sum_probs=69.9
Q ss_pred CCCCCCCcEEEecChHHHHHHHHHHhc---C----------CCC------eEEEeCCCCcc-------------------
Q 019298 95 PYKLTPNDVFVTSGCTQAIDVAMALLS---R----------PGA------NILLPRPGFPI------------------- 136 (343)
Q Consensus 95 ~~~~~~~~i~~~~g~~~al~~~~~~l~---~----------~gd------~vl~~~p~~~~------------------- 136 (343)
...+ ++.|.++.++..++...+++|. . .|. ..+...|.|.-
T Consensus 81 ~L~v-~~~i~I~a~~~~G~f~glqTL~QLl~~~~~~~~~~~~~~~~~ip~~~I~D~Prf~~RG~mLDvsRhf~~~~~ik~ 159 (543)
T 3rcn_A 81 RLEV-SDAVVISAGGAAGAFYGAQTLLQLLGPAALRQAPVVAVEGWSVPRVSVEDKPRFGYRGTMLDVARHFMPKDNVLR 159 (543)
T ss_dssp EEEE-SSSEEEEESSHHHHHHHHHHHHHHHCGGGGSSSCCSCCSCEEEEEEEEEECCSCSEEEEEEETTTSCCCHHHHHH
T ss_pred EEEE-CCeEEEEECCHHHHHHHHHHHHHHHhhhcccccccccCcceeccCEEEEecCCCCccccccccCCCccCHHHHHH
Confidence 3456 7788888877766666666552 1 121 23556777642
Q ss_pred hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh-----cCCceEEEE-e--CCCCCcccccCHHHHHHHHHHHhhcCcE
Q 019298 137 YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-----DQNTVALVI-I--NPGNPCGNVYSYQHLQKLAETANKLKTL 208 (343)
Q Consensus 137 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-----~~~~~~i~~-~--~p~nptG~~~~~~~l~~l~~~~~~~~~~ 208 (343)
+.+....+++++..+.+.++.+|.+.++.+-+.- +..+..--. . .-..|.|-.++++++++|++.|+++++-
T Consensus 160 ~ID~MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~rgI~ 239 (543)
T 3rcn_A 160 FIEVMAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADRHIT 239 (543)
T ss_dssp HHHHHHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHcCCE
Confidence 3445555677888777766666766655433321 111100000 0 0124567889999999999999999988
Q ss_pred EEE
Q 019298 209 VIA 211 (343)
Q Consensus 209 ~i~ 211 (343)
||=
T Consensus 240 VIP 242 (543)
T 3rcn_A 240 VIP 242 (543)
T ss_dssp EEE
T ss_pred Eee
Confidence 774
No 256
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=69.00 E-value=49 Score=27.47 Aligned_cols=96 Identities=14% Similarity=0.060 Sum_probs=51.1
Q ss_pred CcEEEecChHHHH-HHHHHHhcCCCCeEEEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 101 NDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al-~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
+++++.+|++.+| ..+.+.|.+.|-.|++..-.-.. ........+.+...+..+-. |.+++++.+..
T Consensus 7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ-----DDAQCRDAVAQTIATF 81 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC-----CHHHHHHHHHHHHHHh
Confidence 3555555555555 45556677888777665433322 12223445666666665432 44555544432
Q ss_pred CceEEEEeCC--CCCcccccCHHHHHHHHHH
Q 019298 173 NTVALVIINP--GNPCGNVYSYQHLQKLAET 201 (343)
Q Consensus 173 ~~~~i~~~~p--~nptG~~~~~~~l~~l~~~ 201 (343)
..--++++|. +.+.....+.++|++..++
T Consensus 82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 2333455655 2344455778888776654
No 257
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=68.87 E-value=26 Score=32.53 Aligned_cols=106 Identities=14% Similarity=0.207 Sum_probs=61.7
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhcC----C--CC-----eEEEeCCCCcc-------------------hHHHHHhcCc
Q 019298 97 KLTPNDVFVTSGCTQAIDVAMALLSR----P--GA-----NILLPRPGFPI-------------------YELSAAFRHI 146 (343)
Q Consensus 97 ~~~~~~i~~~~g~~~al~~~~~~l~~----~--gd-----~vl~~~p~~~~-------------------~~~~~~~~g~ 146 (343)
.++.+.|.++.++..++...+++|.+ . |. ..+...|.|.. +.+....+++
T Consensus 103 ~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma~~Kl 182 (507)
T 1now_A 103 LVKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKF 182 (507)
T ss_dssp EECSSEEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHHHTTC
T ss_pred EEcCCeEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHHHhCC
Confidence 45667788887777666666666531 1 21 13455666631 2333444566
Q ss_pred eeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 147 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
++..+.+..+.+|.+..+.+-+.-..+. ..| |..++++++++|++.|+++++-||-
T Consensus 183 N~lh~HltDdq~wr~e~~~~P~Lt~~Ga--------~~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 183 NVLHWHIVDDQSFPYQSITFPELSNKGS--------YSL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp CEEEEECCCSSCCCBCCSSCHHHHHHHS--------SST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred cEEEEeeccCccceeeccchhhhhcccC--------cCC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6666666555555554332222110000 012 6679999999999999999988774
No 258
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=68.51 E-value=23 Score=29.51 Aligned_cols=65 Identities=9% Similarity=0.006 Sum_probs=37.4
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-..........+.++..+..+-. |.+.+++.+
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~ 95 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVT-----SEDSVLAAI 95 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHH
Confidence 34555555544445556667788988887765444444555555666666655432 455555444
No 259
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=67.80 E-value=32 Score=27.88 Aligned_cols=94 Identities=11% Similarity=0.073 Sum_probs=47.1
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cce
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTV 175 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~ 175 (343)
.+++|.|++..=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.+.. +..
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADL-----AHHEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TSHHHHHHHHHHHHHHHCSCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCC-----CCHHHHHHHHHHHHHhcCCCc
Confidence 455555555444555666778888887765544444444443344455555432 245555554432 344
Q ss_pred EEEEeCCCCCccc--ccCHHHHHHHHH
Q 019298 176 ALVIINPGNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 176 ~i~~~~p~nptG~--~~~~~~l~~l~~ 200 (343)
.++.+....+.+. .++.+++++..+
T Consensus 80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~ 106 (235)
T 3l6e_A 80 LVLHCAGTGEFGPVGVYTAEQIRRVME 106 (235)
T ss_dssp EEEEECCCC------CCCHHHHHHHHH
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHH
Confidence 5544433332222 346677766554
No 260
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=67.51 E-value=35 Score=28.20 Aligned_cols=94 Identities=12% Similarity=0.039 Sum_probs=51.2
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----CceE
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVA 176 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~ 176 (343)
.+++|.|++..=..+.+.|.+.|..|++.+-.-....... ..+.++..+..+- -|.+++++.++. ..--
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~-~~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA-KERPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-TTCTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhcCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 4566665555555666678889988887665433333333 2344555555432 245555554432 2333
Q ss_pred EEEeCC-CCCccc--ccCHHHHHHHHHH
Q 019298 177 LVIINP-GNPCGN--VYSYQHLQKLAET 201 (343)
Q Consensus 177 i~~~~p-~nptG~--~~~~~~l~~l~~~ 201 (343)
++++|. .++.+. .++.++|+++.++
T Consensus 78 iLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 78 VLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455555 333333 3577888777654
No 261
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=66.34 E-value=45 Score=27.29 Aligned_cols=94 Identities=9% Similarity=-0.023 Sum_probs=49.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 174 (343)
..+++|.+++..=..+.+.|.+.|..|++..-.-..........+.++..+..+-. |.+.+++.++. +.
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~i 84 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADIS-----KEADVDAAVEAALSKFGKV 84 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----SHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHhcCCC
Confidence 34555555544445556667788888877765544445555555666666655432 45555554432 34
Q ss_pred eEEEEeCCC-CCcc--cccCHHHHHHHH
Q 019298 175 VALVIINPG-NPCG--NVYSYQHLQKLA 199 (343)
Q Consensus 175 ~~i~~~~p~-nptG--~~~~~~~l~~l~ 199 (343)
..++.+... .+.+ ...+.+++++..
T Consensus 85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (261)
T 3n74_A 85 DILVNNAGIGHKPQNAELVEPEEFDRIV 112 (261)
T ss_dssp CEEEECCCCCCCSCCGGGSCHHHHHHHH
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHH
Confidence 444433222 2122 224666666543
No 262
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=65.63 E-value=36 Score=28.09 Aligned_cols=65 Identities=8% Similarity=-0.061 Sum_probs=33.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 99 ~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
....+++|.|+...=..+.+.|.+.|..|++..-.-..........+......++ -|.+.+++.+
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv-------~~~~~v~~~~ 90 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDF-------SCETGIMAFI 90 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCT-------TSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCC-------CCHHHHHHHH
Confidence 3345666655555445556667778877776654443333444444544443332 2455555544
No 263
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=65.11 E-value=40 Score=27.52 Aligned_cols=94 Identities=14% Similarity=0.063 Sum_probs=47.9
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 174 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-..........+.....+..+- -|.+.+++.++. +.
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 84 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV-----TNPESIEAVLKAITDEFGGV 84 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3455555554444455666778898887765443333334444444444454432 245666554432 34
Q ss_pred eEEEEeCC-CCCcc--cccCHHHHHHHHH
Q 019298 175 VALVIINP-GNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 175 ~~i~~~~p-~nptG--~~~~~~~l~~l~~ 200 (343)
..++ ++. ..+.+ ...+.+++++..+
T Consensus 85 D~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 85 DILV-NNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp SEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 4444 444 22222 2346677766544
No 264
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=64.81 E-value=45 Score=25.55 Aligned_cols=79 Identities=9% Similarity=-0.087 Sum_probs=51.5
Q ss_pred CCCeEEEeCCCCcchHHHHHhcCceeE---EeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHH
Q 019298 123 PGANILLPRPGFPIYELSAAFRHIEVR---HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199 (343)
Q Consensus 123 ~gd~vl~~~p~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~ 199 (343)
.+..|+...|-+..+.......|++.. .+..... .=-+..+|++++.+....+++.... ++..++++|-
T Consensus 74 ~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~---~daLwa~EqALrsG~~~aVl~Wl~~-----l~~~~~RRLq 145 (161)
T 1oft_A 74 DARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDN---AAALALSCEALRLGRSHTVVSWLEP-----LSRAARKQLS 145 (161)
T ss_dssp SSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSST---THHHHHHHHHHHTTCEEEEEECCSS-----CCHHHHHHHH
T ss_pred cCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCCh---HHHHHHHHHHHhcCCccEEEECCCc-----CChHHHHHHH
Confidence 445666667777778888888887643 3433211 1126778888888887777776442 5667888887
Q ss_pred HHHhhcCcEE
Q 019298 200 ETANKLKTLV 209 (343)
Q Consensus 200 ~~~~~~~~~~ 209 (343)
--++.-+...
T Consensus 146 lAAe~g~~~~ 155 (161)
T 1oft_A 146 RAAQLGQAQS 155 (161)
T ss_dssp HHHHHTTCEE
T ss_pred HHHHhCCCeE
Confidence 7777766553
No 265
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=64.05 E-value=59 Score=26.66 Aligned_cols=99 Identities=15% Similarity=0.120 Sum_probs=58.9
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEE-E--eCC-----------CCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHH
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANIL-L--PRP-----------GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE 167 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl-~--~~p-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 167 (343)
-++..+|+.++...+..+. +.|-.|. + ..+ ........++..|++...+++..+. .-..+.+.
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~--~~e~e~l~ 83 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEK--EKEVEDLK 83 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCc--hHHHHHHH
Confidence 4567789988887766544 4554442 2 111 1122355777889988877764321 12367777
Q ss_pred hhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEE
Q 019298 168 SLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (343)
Q Consensus 168 ~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i 210 (343)
++++. +...++ +|.+++..+...+-+.|.+.|+..+
T Consensus 84 ~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 84 RVLSGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 77764 344555 7888887888888999999987754
No 266
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=63.73 E-value=59 Score=26.54 Aligned_cols=95 Identities=13% Similarity=0.028 Sum_probs=49.7
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC----C
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----N 173 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~ 173 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-....... ...|.++..+..+-. |.+.+++.+.. .
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR-----NEDEVTAFLNAADAHA 82 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCC-----CHHHHHHHHHHHHhhC
Confidence 34556655555445556667788888877655444433333 333667777665432 45555554432 2
Q ss_pred ceEEEEeCCC-CCccc--ccCHHHHHHHHH
Q 019298 174 TVALVIINPG-NPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 174 ~~~i~~~~p~-nptG~--~~~~~~l~~l~~ 200 (343)
..-+++++.. ...+. ..+.+++++..+
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 83 PLEVTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CceEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 2334445442 22222 356666665443
No 267
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=63.59 E-value=20 Score=28.84 Aligned_cols=93 Identities=13% Similarity=0.038 Sum_probs=50.0
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEE
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALV 178 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~ 178 (343)
.+++|.|++..=..+.+.|.+.|..|++..-.-..........+.++..+..+. -|.+.+++.+.. ....+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~d~l- 76 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDL-----ASHQEVEQLFEQLDSIPSTV- 76 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCT-----TCHHHHHHHHHSCSSCCSEE-
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecC-----CCHHHHHHHHHHHhhcCCEE-
Confidence 356666655555556666777888777766554444445554455555554432 256666666543 22344
Q ss_pred EeCC-CCCccc--ccCHHHHHHHHH
Q 019298 179 IINP-GNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 179 ~~~p-~nptG~--~~~~~~l~~l~~ 200 (343)
+++. ..+.+. ..+.+++++..+
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~ 101 (230)
T 3guy_A 77 VHSAGSGYFGLLQEQDPEQIQTLIE 101 (230)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred EEeCCcCCCCccccCCHHHHHHHHH
Confidence 4444 232222 356677666444
No 268
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=63.44 E-value=51 Score=27.10 Aligned_cols=93 Identities=16% Similarity=0.175 Sum_probs=51.0
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEE
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVI 179 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~ 179 (343)
..+++|.|++..=..+.+.|.+.|-.|++.+-.-.... ...+.++..+..+- -|.+++++.+.. ..--+++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~---~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~g~iDiLV 83 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH---APRHPRIRREELDI-----TDSQRLQRLFEALPRLDVLV 83 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT---SCCCTTEEEEECCT-----TCHHHHHHHHHHCSCCSEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh---hhhcCCeEEEEecC-----CCHHHHHHHHHhcCCCCEEE
Confidence 34455555554445556667788988877654332221 22344555555432 245666666654 2223455
Q ss_pred eCC-CCCcccccCHHHHHHHHHH
Q 019298 180 INP-GNPCGNVYSYQHLQKLAET 201 (343)
Q Consensus 180 ~~p-~nptG~~~~~~~l~~l~~~ 201 (343)
+|. -+.....++.++|+++.++
T Consensus 84 NNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 84 NNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp ECCCCCCGGGGGSHHHHHHHHHH
T ss_pred ECCCCCCCcccCCHHHHHHHHHH
Confidence 555 2334456788888877664
No 269
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=63.09 E-value=61 Score=26.43 Aligned_cols=66 Identities=14% Similarity=-0.072 Sum_probs=36.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.++...=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.+.
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 78 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV-----TSEKDVQTALA 78 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHH
Confidence 3455555544444555666777887777664444444444444455566555432 24566655543
No 270
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=62.85 E-value=45 Score=24.85 Aligned_cols=109 Identities=13% Similarity=0.113 Sum_probs=64.9
Q ss_pred CCCCCcEEEecCh--HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCc
Q 019298 97 KLTPNDVFVTSGC--TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174 (343)
Q Consensus 97 ~~~~~~i~~~~g~--~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 174 (343)
.++...++++.+- ...+.-+.+.|.+-|-+++...-+ ....+..|+.+..+.-..+++..-+...+.+.++++.
T Consensus 21 ~lP~~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GT----a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~ 96 (143)
T 2yvq_A 21 KIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATEAT----SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGS 96 (143)
T ss_dssp CCCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHH----HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTS
T ss_pred CCCCCCEEEEecccchHHHHHHHHHHHHCCCEEEECchH----HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCC
Confidence 3433447776565 555555667777778777665533 3455678888887753332211001123555566565
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 175 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
..++++.|..-. -+..+-..|.+.|-+|+++++..
T Consensus 97 i~lVInt~~~~~---~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 97 IDLVINLPNNNT---KFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp CCEEEECCCCCG---GGHHHHHHHHHHHHHTTCCEECS
T ss_pred ceEEEECCCCCC---cCCccHHHHHHHHHHhCCCeEcC
Confidence 566667774311 22578889999999999988754
No 271
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=62.48 E-value=32 Score=28.67 Aligned_cols=96 Identities=16% Similarity=0.051 Sum_probs=49.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCc------------ch---HHHHHhcCceeEEeecCCCCCCCCCHHH
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP------------IY---ELSAAFRHIEVRHFDLLPDKGWEVDLDD 165 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~------------~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 165 (343)
..+++|.|++..=..+.+.|.+.|..|++..-... .. .......+.++..+..+- -|.+.
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~ 85 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDV-----RDRAA 85 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCT-----TCHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccC-----CCHHH
Confidence 34555555554445566667788888877543310 11 112233466666665543 24555
Q ss_pred HHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHH
Q 019298 166 IESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAET 201 (343)
Q Consensus 166 l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 201 (343)
+++.+.. +...++.+....+.+...+.+++++..+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 5554432 34444433333333344667777776553
No 272
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=62.34 E-value=57 Score=26.62 Aligned_cols=66 Identities=17% Similarity=-0.007 Sum_probs=33.9
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.++...=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.++
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 71 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDV-----TIEEDWQRVVA 71 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecC-----CCHHHHHHHHH
Confidence 3455555544444555666777888877654333223333333344555554432 24555555443
No 273
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=62.05 E-value=63 Score=26.30 Aligned_cols=93 Identities=15% Similarity=-0.032 Sum_probs=44.8
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cce
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTV 175 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~ 175 (343)
.+++|.++...=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.+.. +..
T Consensus 8 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id 82 (253)
T 1hxh_A 8 VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV-----SSEADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCT-----TCHHHHHHHHHHHHHHHCSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 445554444444455566777888887765443333333333354555554432 245555554432 234
Q ss_pred EEEEeCCCCCccc--ccCHHHHHHHH
Q 019298 176 ALVIINPGNPCGN--VYSYQHLQKLA 199 (343)
Q Consensus 176 ~i~~~~p~nptG~--~~~~~~l~~l~ 199 (343)
.++.+....+.+. ..+.+++++..
T Consensus 83 ~lv~~Ag~~~~~~~~~~~~~~~~~~~ 108 (253)
T 1hxh_A 83 VLVNNAGILLPGDMETGRLEDFSRLL 108 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHH
Confidence 4443322222221 24556665544
No 274
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=61.20 E-value=61 Score=26.84 Aligned_cols=96 Identities=11% Similarity=-0.012 Sum_probs=49.2
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC---
Q 019298 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--- 172 (343)
Q Consensus 99 ~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--- 172 (343)
....+++|.|+...=..+.+.|.+.|..|++..-.-....... ...|.++..+..+- -|.+.+++.+..
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAFARLDE 99 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3334555555444445566667788988887765443333322 22355666655432 245666555432
Q ss_pred ---CceEEEEeCC-CCCcc--cccCHHHHHHHHH
Q 019298 173 ---NTVALVIINP-GNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 ---~~~~i~~~~p-~nptG--~~~~~~~l~~l~~ 200 (343)
+...+ +++. ....+ ...+.+++++..+
T Consensus 100 ~~g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 100 QGIDVDIL-VNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp HTCCCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HCCCCCEE-EECCCCCCCCCchhCCHHHHHHHHH
Confidence 33444 4444 22222 2356677766544
No 275
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=61.00 E-value=62 Score=26.24 Aligned_cols=91 Identities=11% Similarity=0.027 Sum_probs=43.5
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cce
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTV 175 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~ 175 (343)
.+++|.++...=..+.+.|.+.|..|++..-.-..........|.. .+..+- -|.+.+++.+.. +..
T Consensus 7 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~D~-----~~~~~~~~~~~~~~~~~g~id 79 (245)
T 1uls_A 7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH--PVVMDV-----ADPASVERGFAEALAHLGRLD 79 (245)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCE--EEECCT-----TCHHHHHHHHHHHHHHHSSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCE--EEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 4555555444444556667778888876543322233333333433 333322 245666554432 344
Q ss_pred EEEEeCCC-CCcc--cccCHHHHHHHHH
Q 019298 176 ALVIINPG-NPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 176 ~i~~~~p~-nptG--~~~~~~~l~~l~~ 200 (343)
.++ ++.. .+.+ ...+.+++++..+
T Consensus 80 ~lv-n~Ag~~~~~~~~~~~~~~~~~~~~ 106 (245)
T 1uls_A 80 GVV-HYAGITRDNFHWKMPLEDWELVLR 106 (245)
T ss_dssp EEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 444 4432 2222 2245666665444
No 276
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=60.68 E-value=56 Score=26.74 Aligned_cols=94 Identities=12% Similarity=0.042 Sum_probs=48.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-...... ....+.++..+..+- -|.+.+++.+..
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNV-----TDEQHREAVIKAALDQF 87 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 3455555544444555666777888887765443332222 233456666665543 245555554432
Q ss_pred -CceEEEEeCC-C-CCcccccCHHHHHHHHH
Q 019298 173 -NTVALVIINP-G-NPCGNVYSYQHLQKLAE 200 (343)
Q Consensus 173 -~~~~i~~~~p-~-nptG~~~~~~~l~~l~~ 200 (343)
+...+ +++. . .+.....+.+++++..+
T Consensus 88 g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 88 GKITVL-VNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp SCCCEE-EECCCCCCCCCTTCCHHHHHHHHH
T ss_pred CCCCEE-EECCCCCCCCCCCCCHHHHHHHHH
Confidence 34444 4444 2 22222566777766544
No 277
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=59.54 E-value=55 Score=27.19 Aligned_cols=94 Identities=14% Similarity=0.189 Sum_probs=49.5
Q ss_pred CcEEEecChHHHH-HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------C
Q 019298 101 NDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------N 173 (343)
Q Consensus 101 ~~i~~~~g~~~al-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~ 173 (343)
..+++.+|++.+| ..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.++. +
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 102 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDV-----TDPDSVRALFTATVEKFGR 102 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 3555555555554 445566778888887765544444455555555566555432 245555554432 3
Q ss_pred ceEEEEeCCC--CCcc--cccCHHHHHHHHH
Q 019298 174 TVALVIINPG--NPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 174 ~~~i~~~~p~--nptG--~~~~~~~l~~l~~ 200 (343)
...+ +++.. .+.+ ..++.+++++..+
T Consensus 103 iD~l-VnnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 103 VDVL-FNNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp CCEE-EECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred CCEE-EECCCCCCCCCChhhCCHHHHHHHHH
Confidence 4444 44442 2222 2356677666443
No 278
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=59.27 E-value=74 Score=26.20 Aligned_cols=95 Identities=13% Similarity=0.106 Sum_probs=46.6
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH----hcCceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-........ ..+.++..+..+- -|.+.+++.+..
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-----SNYEEVKKLLEAVKEK 96 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 345555554444445566677788887776443322222222 2255566555432 245666554432
Q ss_pred --CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 019298 173 --NTVALVIINPGNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 --~~~~i~~~~p~nptG--~~~~~~~l~~l~~ 200 (343)
+...++.+......+ ...+.++++++.+
T Consensus 97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 128 (267)
T 1vl8_A 97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIE 128 (267)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 344444332222222 2246677766544
No 279
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=59.20 E-value=32 Score=34.12 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=66.8
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhc---CCC-C-----eEEEeCCCCcc-------------------hHHHHHhcCcee
Q 019298 97 KLTPNDVFVTSGCTQAIDVAMALLS---RPG-A-----NILLPRPGFPI-------------------YELSAAFRHIEV 148 (343)
Q Consensus 97 ~~~~~~i~~~~g~~~al~~~~~~l~---~~g-d-----~vl~~~p~~~~-------------------~~~~~~~~g~~~ 148 (343)
.++.+.|.++.+...++...+++|. ..+ . ..+...|.|.. +.+....+++++
T Consensus 265 ~v~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~KlN~ 344 (858)
T 1c7s_A 265 KIGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNK 344 (858)
T ss_dssp EECSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCE
T ss_pred EEeCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhCCcE
Confidence 3566788888777666666666552 222 1 23555676641 233455567777
Q ss_pred EEeecCCCCCCCCCHHHHHhhhcCCceE--------EEEeC-CC--CCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 149 RHFDLLPDKGWEVDLDDIESLADQNTVA--------LVIIN-PG--NPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 149 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~--------i~~~~-p~--nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
..+.+..+.+|.+.++.+-+.-.....- .+... .+ .+.|-.++++++++|++.|+++++-||-
T Consensus 345 lh~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 345 FHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp EEEECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSBCCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEEeccCccccccccCCchhhhccccccccccccccccccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 7777665556666654432221100000 00000 01 1457789999999999999999988774
No 280
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=58.79 E-value=72 Score=25.88 Aligned_cols=94 Identities=16% Similarity=0.061 Sum_probs=45.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCC-cchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------C
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF-PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------N 173 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~ 173 (343)
..+++|.++...=..+.+.|.+.|..|++..-.- ..........+.++..+..+- -|.+.+++.++. +
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 82 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV-----SQPGDVEAFGKQVISTFGR 82 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeec-----CCHHHHHHHHHHHHHHcCC
Confidence 3455555554444555666777887777654332 222223334455566565432 245555554431 3
Q ss_pred ceEEEEeCCCCCcc--cccCHHHHHHHH
Q 019298 174 TVALVIINPGNPCG--NVYSYQHLQKLA 199 (343)
Q Consensus 174 ~~~i~~~~p~nptG--~~~~~~~l~~l~ 199 (343)
...++.+....+.+ ...+.+++++..
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~ 110 (249)
T 2ew8_A 83 CDILVNNAGIYPLIPFDELTFEQWKKTF 110 (249)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHH
Confidence 44444333222222 124556655443
No 281
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=58.11 E-value=54 Score=30.86 Aligned_cols=101 Identities=11% Similarity=0.119 Sum_probs=58.5
Q ss_pred cEEEecChHHHHHHHHHHhcC---C----C------CeEEEeCCCCcc-------------------hHHHHHhcCceeE
Q 019298 102 DVFVTSGCTQAIDVAMALLSR---P----G------ANILLPRPGFPI-------------------YELSAAFRHIEVR 149 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~---~----g------d~vl~~~p~~~~-------------------~~~~~~~~g~~~~ 149 (343)
.|.++.++..++...+++|.+ . + ...+...|.|.- +.+....+++++.
T Consensus 142 ~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~~p~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~id~mA~~KlN~l 221 (572)
T 3ozo_A 142 NATITANSFFGMRHGLETLSQLFVFDDIRDHLLMVRDVNISDKPVYPYRGILLDTARNYYSIESIKRTIEAMAAVKLNTF 221 (572)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTEEEETTTTEEEEESSEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEECCHHHHHHHHHHHHHHHhhccccccccccCceeEEecCCCccccceeccCCCCCCHHHHHHHHHHHHHcCCceE
Confidence 356666666666666666532 1 1 134556666642 2334444566666
Q ss_pred EeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 150 ~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
.+.+.++.+|.+.++.+-+.-..+ ....+..++++++++|++.|+++++-||-
T Consensus 222 H~HltDdqgwrlei~~~P~Lt~~G---------a~~~~~~YT~~di~eiv~yA~~rgI~VIP 274 (572)
T 3ozo_A 222 HWHITDSQSFPFVTTKRPNLYKFG---------ALSPQKVYTKAAIREVVRFGLERGVRVLP 274 (572)
T ss_dssp EEECCCSSCCCBCCSSSHHHHHHH---------SSSSSSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEeecCcCceeccccCcchhccC---------CcCCCCCcCHHHHHHHHHHHHHhCCceee
Confidence 666655555655544332221100 01235688999999999999999987764
No 282
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=57.78 E-value=81 Score=26.55 Aligned_cols=94 Identities=17% Similarity=0.152 Sum_probs=48.0
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.++.
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDV-----RHLDEMVRLADEAFRLL 106 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccC-----CCHHHHHHHHHHHHHhC
Confidence 44555555544444556667788888877654443333322 22355666665543 245666554432
Q ss_pred -CceEEEEeCC-CCCccc--ccCHHHHHHHHH
Q 019298 173 -NTVALVIINP-GNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 -~~~~i~~~~p-~nptG~--~~~~~~l~~l~~ 200 (343)
+...++ ++. ....+. ..+.+++++..+
T Consensus 107 g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 107 GGVDVVF-SNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp SSCSEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 344444 444 222222 346666665443
No 283
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=57.69 E-value=73 Score=25.65 Aligned_cols=95 Identities=16% Similarity=0.027 Sum_probs=47.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-..... ..+..+.++..+..+- -|.+.+++.+..
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNI-----SDIESIQNFFAEIKAEN 80 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 345555555444445566677788888776544333222 2233466666665543 245555554432
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 019298 173 -NTVALVIINPGNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 -~~~~i~~~~p~nptG~--~~~~~~l~~l~~ 200 (343)
+...++.+....+.+. ..+.+++++..+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 81 LAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 3344443332222222 346666655443
No 284
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=57.66 E-value=44 Score=27.10 Aligned_cols=75 Identities=11% Similarity=0.042 Sum_probs=40.0
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--CceEE
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVAL 177 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i 177 (343)
...+++|.|+...=..+.+.|.+.|..|++..-.-.............+..+..+. -|.+.+++.+.. +...+
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNL-----ANKEECSNLISKTSNLDIL 88 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHHTCSCCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCC-----CCHHHHHHHHHhcCCCCEE
Confidence 34455555544444455566778888888766544444444444444444443322 246667766654 34444
Q ss_pred EE
Q 019298 178 VI 179 (343)
Q Consensus 178 ~~ 179 (343)
+.
T Consensus 89 i~ 90 (249)
T 3f9i_A 89 VC 90 (249)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 285
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=57.46 E-value=78 Score=25.86 Aligned_cols=95 Identities=8% Similarity=-0.047 Sum_probs=44.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 174 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-............++..+..+- -|.+.+++.+.. +.
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~~~~~g~i 87 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDV-----TKRASVDAAMQKAIDALGGF 87 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCT-----TCHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3455555544444455666777888877654332222223232222334444332 245666555432 34
Q ss_pred eEEEEeCCCCCcc--cccCHHHHHHHHH
Q 019298 175 VALVIINPGNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 175 ~~i~~~~p~nptG--~~~~~~~l~~l~~ 200 (343)
..++.+......+ ...+.+++++..+
T Consensus 88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 88 DLLCANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 4444332222222 2245666665443
No 286
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=57.33 E-value=82 Score=26.08 Aligned_cols=94 Identities=14% Similarity=0.120 Sum_probs=48.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH----hcCceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-........ ..+.++..+..+-. |.+.+++.+..
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR-----APPAVMAAVDQALKE 102 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 345555555544455566777889888776544333222222 23566666655432 45555554432
Q ss_pred --CceEEEEeCCC-CCcc--cccCHHHHHHHHH
Q 019298 173 --NTVALVIINPG-NPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 --~~~~i~~~~p~-nptG--~~~~~~~l~~l~~ 200 (343)
+...+ +++.. ...+ ..++.+++++..+
T Consensus 103 ~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 134 (277)
T 4fc7_A 103 FGRIDIL-INCAAGNFLCPAGALSFNAFKTVMD 134 (277)
T ss_dssp HSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEE-EECCcCCCCCCcccCCHHHHHHHHH
Confidence 34444 44442 2222 2256677776654
No 287
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=56.78 E-value=79 Score=25.77 Aligned_cols=93 Identities=16% Similarity=0.009 Sum_probs=44.3
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc-hHHHHHhc----CceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI-YELSAAFR----HIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~-~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
.+++|.++...=..+.+.|.+.|..|++..-.-.. ........ +.++..+..+- -|.+.+++.+..
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHHHHHHHh
Confidence 34455444444445556677788888776544332 22222221 55555554432 245666555432
Q ss_pred --CceEEEEeCCCCCcc--cccCHHHHHHHH
Q 019298 173 --NTVALVIINPGNPCG--NVYSYQHLQKLA 199 (343)
Q Consensus 173 --~~~~i~~~~p~nptG--~~~~~~~l~~l~ 199 (343)
+...++.+....+.+ ...+.+++++..
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~ 111 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAIL 111 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 344444332222222 224566665543
No 288
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=56.40 E-value=89 Score=26.24 Aligned_cols=95 Identities=17% Similarity=0.080 Sum_probs=48.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc---C-ceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR---H-IEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~---g-~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......... + .++..+..+- -|.+.+++.+..
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAARTVVDA 116 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHHHHHHHH
Confidence 34455544444444556667788888877655544444433332 2 3455555432 245555554432
Q ss_pred --CceEEEEeCC-CCCccc--ccCHHHHHHHHHH
Q 019298 173 --NTVALVIINP-GNPCGN--VYSYQHLQKLAET 201 (343)
Q Consensus 173 --~~~~i~~~~p-~nptG~--~~~~~~l~~l~~~ 201 (343)
+...+ +++. ..+.+. .++.+++++..+.
T Consensus 117 ~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 117 FGALDVV-CANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HSCCCEE-EECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred cCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 33444 4444 232222 3566777766553
No 289
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=56.14 E-value=82 Score=25.76 Aligned_cols=66 Identities=14% Similarity=-0.009 Sum_probs=32.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.++...=..+.+.|.+.|..|++..-.-.............+..+..+- -|.+.+++.++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 73 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDV-----TQPAQWKAAVD 73 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecC-----CCHHHHHHHHH
Confidence 3455555544444455666777888877654332222223233322344444332 24566665553
No 290
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=56.12 E-value=85 Score=25.89 Aligned_cols=93 Identities=19% Similarity=0.133 Sum_probs=46.9
Q ss_pred cEEEecChHHHH-HHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 102 DVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 102 ~i~~~~g~~~al-~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
.+++.+|++.+| ..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.+..
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDV-----TDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHc
Confidence 445555555444 4455667788888877654433333222 23366666665543 245555554432
Q ss_pred -CceEEEEeCC-CCCccc--ccCHHHHHHHHH
Q 019298 173 -NTVALVIINP-GNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 -~~~~i~~~~p-~nptG~--~~~~~~l~~l~~ 200 (343)
+...++ ++. ..+.+. ..+.+++++..+
T Consensus 80 g~iD~lV-nnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 80 GRIDVLV-NNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp SCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 344444 444 232222 246677765544
No 291
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=54.86 E-value=94 Score=26.06 Aligned_cols=96 Identities=14% Similarity=0.079 Sum_probs=48.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCC------------Ccch---HHHHHhcCceeEEeecCCCCCCCCCH
Q 019298 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPG------------FPIY---ELSAAFRHIEVRHFDLLPDKGWEVDL 163 (343)
Q Consensus 99 ~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~------------~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~ 163 (343)
....+++|.|++..=..+.+.|.+.|..|++.+-. -... ...+...+.++..+..+-. |.
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~ 101 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVR-----DF 101 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCC-----CH
Confidence 33445555555544455566677889888765432 1111 1122334666666665432 45
Q ss_pred HHHHhhhcC------CceEEEEeCC-CCCcc---cccCHHHHHHHHH
Q 019298 164 DDIESLADQ------NTVALVIINP-GNPCG---NVYSYQHLQKLAE 200 (343)
Q Consensus 164 ~~l~~~~~~------~~~~i~~~~p-~nptG---~~~~~~~l~~l~~ 200 (343)
+.+++.+.. +...+ +++. ....+ ..++.+++++..+
T Consensus 102 ~~v~~~~~~~~~~~g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 102 DAMQAAVDDGVTQLGRLDIV-LANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp HHHHHHHHHHHHHHSCCCEE-EECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEE-EECCCCCCCCCchhhCCHHHHHHHHH
Confidence 666554432 34444 4444 22222 2356777776554
No 292
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=53.44 E-value=95 Score=25.66 Aligned_cols=95 Identities=14% Similarity=0.012 Sum_probs=45.0
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.+..
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV-----RSVPEIEALVAAVVERY 97 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 34555555444444556667778877776543322222222 22255555555432 245555554432
Q ss_pred -CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 019298 173 -NTVALVIINPGNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 -~~~~i~~~~p~nptG--~~~~~~~l~~l~~ 200 (343)
+...++.+......+ ...+.+++++..+
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 98 GPVDVLVNNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 344444332222222 2245666665544
No 293
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=53.32 E-value=23 Score=30.09 Aligned_cols=76 Identities=12% Similarity=0.069 Sum_probs=46.4
Q ss_pred CCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 133 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
+|..+.........++..+-+.++ .-.+.++++++.+.+.+++.+. | ++.++.+++.+.++++++.++-.
T Consensus 52 vy~sl~el~~~~~~D~viI~tP~~----~~~~~~~ea~~~Gi~~iVi~t~----G--~~~~~~~~l~~~A~~~gv~liGP 121 (288)
T 2nu8_A 52 VFNTVREAVAATGATASVIYVPAP----FCKDSILEAIDAGIKLIITITE----G--IPTLDMLTVKVKLDEAGVRMIGP 121 (288)
T ss_dssp EESSHHHHHHHHCCCEEEECCCGG----GHHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHHTCEEECS
T ss_pred ccCCHHHHhhcCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEec
Confidence 344444444432455444433221 2356677777777777665443 3 24577889999999999988777
Q ss_pred cCCCcc
Q 019298 213 EVYGHL 218 (343)
Q Consensus 213 ~ay~~~ 218 (343)
.+.+..
T Consensus 122 Nc~Gi~ 127 (288)
T 2nu8_A 122 NTPGVI 127 (288)
T ss_dssp SCCEEE
T ss_pred CCccee
Confidence 765443
No 294
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=53.24 E-value=37 Score=28.68 Aligned_cols=22 Identities=0% Similarity=0.092 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHhhcCcEEEEcc
Q 019298 192 YQHLQKLAETANKLKTLVIADE 213 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ 213 (343)
.+.++++++.|.++|+.+|+|-
T Consensus 64 ~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 64 PSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 3667777777777777777774
No 295
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=53.02 E-value=93 Score=25.41 Aligned_cols=95 Identities=15% Similarity=-0.010 Sum_probs=47.4
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-...... ....+.++..+..+-. |.+.+++.+..
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLS-----HSDAIAAFATGVLAAH 104 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHHHHHhc
Confidence 3445554444444445566777888887765444333222 2234566666655432 45555554432
Q ss_pred -CceEEEEeCCC-CCccc--ccCHHHHHHHHH
Q 019298 173 -NTVALVIINPG-NPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 -~~~~i~~~~p~-nptG~--~~~~~~l~~l~~ 200 (343)
+...++.+... .+.+. ..+.+++++..+
T Consensus 105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred CCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 34555443332 22222 256666665443
No 296
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=52.99 E-value=72 Score=25.95 Aligned_cols=94 Identities=15% Similarity=0.053 Sum_probs=44.9
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc-----C-ceeEEeecCCCCCCCCCHHHHHhhhcC---
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR-----H-IEVRHFDLLPDKGWEVDLDDIESLADQ--- 172 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-----g-~~~~~~~~~~~~~~~~d~~~l~~~~~~--- 172 (343)
.+++|.|++..=..+.+.|.+.|..|++..-.-.......... + .++..+..+- -|.+.+++.+..
T Consensus 9 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 9 LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI-----TDCTKADTEIKDIHQ 83 (250)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccC-----CCHHHHHHHHHHHHH
Confidence 4455554444445556667778888877654443333322221 2 3455554432 245555554432
Q ss_pred --CceEEEEeCCC-C-CcccccCHHHHHHHHH
Q 019298 173 --NTVALVIINPG-N-PCGNVYSYQHLQKLAE 200 (343)
Q Consensus 173 --~~~~i~~~~p~-n-ptG~~~~~~~l~~l~~ 200 (343)
...-+++++.. . +.....+.+++++..+
T Consensus 84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 115 (250)
T 3nyw_A 84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIME 115 (250)
T ss_dssp HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHH
T ss_pred hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHH
Confidence 23334445542 2 2222345566655443
No 297
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=52.94 E-value=80 Score=25.93 Aligned_cols=66 Identities=17% Similarity=0.139 Sum_probs=34.0
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.++...=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.++
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 72 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADV-----SDPKAVEAVFA 72 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCT-----TSHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHH
Confidence 3455555544444455666777888877664433333333333333455554432 24555555443
No 298
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=52.81 E-value=68 Score=26.53 Aligned_cols=94 Identities=10% Similarity=0.062 Sum_probs=47.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCC------------C-cchH---HHHHhcCceeEEeecCCCCCCCCCHH
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPG------------F-PIYE---LSAAFRHIEVRHFDLLPDKGWEVDLD 164 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~------------~-~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~ 164 (343)
..+++|.|++..=..+.+.|.+.|..|++.+-. . .... ......+.++..+..+- -|.+
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~ 86 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT-----RDFD 86 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC-----CCHH
Confidence 345555555544455666777888888765321 1 1111 12233455666665543 2556
Q ss_pred HHHhhhcC------CceEEEEeCC-CCCccc--ccCHHHHHHHHH
Q 019298 165 DIESLADQ------NTVALVIINP-GNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 165 ~l~~~~~~------~~~~i~~~~p-~nptG~--~~~~~~l~~l~~ 200 (343)
.+++.++. +... ++++. ....+. ..+.+++++..+
T Consensus 87 ~v~~~~~~~~~~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDI-IVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp HHHHHHHHHHHHHSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 66655542 3444 44444 222222 356677766554
No 299
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=52.75 E-value=91 Score=25.84 Aligned_cols=93 Identities=10% Similarity=-0.027 Sum_probs=46.7
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC------
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------ 172 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------ 172 (343)
.+++|.|++..=..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.+..
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV-----TSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHcC
Confidence 4455555444444556667788888877654433222222 22355666665543 245555554432
Q ss_pred CceEEEEeCC-CCCcc--cccCHHHHHHHHH
Q 019298 173 NTVALVIINP-GNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 ~~~~i~~~~p-~nptG--~~~~~~~l~~l~~ 200 (343)
+... ++++. ..+.+ ...+.+++++..+
T Consensus 101 ~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 101 PIGI-LVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp SCCE-EEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCcE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3344 44444 22222 2356677765444
No 300
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=52.39 E-value=81 Score=25.34 Aligned_cols=64 Identities=13% Similarity=-0.021 Sum_probs=31.7
Q ss_pred EEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 103 VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
+++|.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..+- -|.+.+++.+.
T Consensus 5 vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 72 (250)
T 2cfc_A 5 AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV-----ADEGDVNAAIA 72 (250)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-----TCHHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHH
Confidence 45554444433455566777787777654333222222222 244455554432 24566665543
No 301
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=52.19 E-value=94 Score=25.24 Aligned_cols=92 Identities=12% Similarity=-0.011 Sum_probs=43.1
Q ss_pred EEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC------C
Q 019298 103 VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------N 173 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~ 173 (343)
+++|.++...=..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.+.. +
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 5 ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDV-----SDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHHhCC
Confidence 455544444444555667778888776543322222222 22355555555432 245666655432 3
Q ss_pred ceEEEEeCCCCCccc--ccCHHHHHHHH
Q 019298 174 TVALVIINPGNPCGN--VYSYQHLQKLA 199 (343)
Q Consensus 174 ~~~i~~~~p~nptG~--~~~~~~l~~l~ 199 (343)
...++.+....+.+. .++.+++++..
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~ 107 (256)
T 1geg_A 80 FDVIVNNAGVAPSTPIESITPEIVDKVY 107 (256)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 444443332222221 24556665443
No 302
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=52.15 E-value=88 Score=24.91 Aligned_cols=94 Identities=15% Similarity=0.088 Sum_probs=48.7
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH----hcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
.+++|.|+...=..+.+.|.+.|..|++..-.......... ..+.++..+..+- -|.+.+++.+..
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-----SKAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-----CCHHHHHHHHHHHHHhc
Confidence 35555555544455566677888888776554433332222 3456666665543 256666665542
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 019298 173 -NTVALVIINPGNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 -~~~~i~~~~p~nptG~--~~~~~~l~~l~~ 200 (343)
+...++.+....+.+. ..+.+++++..+
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIE 109 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHH
Confidence 3444443333333232 246666665443
No 303
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=52.11 E-value=93 Score=25.16 Aligned_cols=94 Identities=11% Similarity=0.043 Sum_probs=45.8
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH---hcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA---FRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
..+++|.++...=..+.+.|.+.|..|++..-.-........ ..|.++..+..+- -|.+.+++.+..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDV-----ADRQGVDAAVASTVEAL 82 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 345666555554455566677788877765433222222222 2355566555432 245666554432
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHH
Q 019298 173 -NTVALVIINPGNPCGN--VYSYQHLQKLA 199 (343)
Q Consensus 173 -~~~~i~~~~p~nptG~--~~~~~~l~~l~ 199 (343)
+...++.+....+.+. ..+.++++++.
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 112 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMI 112 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHH
Confidence 3444443332222222 24556665443
No 304
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=52.01 E-value=92 Score=25.07 Aligned_cols=65 Identities=14% Similarity=0.002 Sum_probs=33.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCcee-EEeecCCCCCCCCCHHHHHhhh
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV-RHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-..........+.++ ..+..+- -|.+.+++.+
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 77 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV-----TDAEAMTAAA 77 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEec-----CCHHHHHHHH
Confidence 455565554444455566677788877766443332333333334444 4444332 2556666554
No 305
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=51.98 E-value=1e+02 Score=25.55 Aligned_cols=32 Identities=22% Similarity=0.217 Sum_probs=20.0
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeC
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~ 131 (343)
...+++|.|++..=..+.+.|.+.|..|++.+
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 34455555555444556667778898887653
No 306
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=51.83 E-value=1e+02 Score=25.53 Aligned_cols=97 Identities=11% Similarity=0.024 Sum_probs=49.2
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC---
Q 019298 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--- 172 (343)
Q Consensus 99 ~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--- 172 (343)
....+++|.|++..=..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.++.
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDV-----TQPDQVRGMLDQMTG 105 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3345556655554445556667788888877654443333322 23355566565443 245666555432
Q ss_pred ---CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 019298 173 ---NTVALVIINPGNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 ---~~~~i~~~~p~nptG--~~~~~~~l~~l~~ 200 (343)
+...++.+......+ ...+.++++++.+
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 344444332222222 2356677765443
No 307
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=51.68 E-value=98 Score=25.31 Aligned_cols=95 Identities=13% Similarity=0.067 Sum_probs=48.7
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
...+++|.|++..=..+.+.|.+.|..|++..-.-....... ...+.++..+..+-. |.+.+++.+..
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDIT-----DDAQVAHLVDETMKA 85 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 344555555554445556667788888877654433332222 233556666655432 45555554432
Q ss_pred --CceEEEEeCC-C-CCccc--ccCHHHHHHHHH
Q 019298 173 --NTVALVIINP-G-NPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 --~~~~i~~~~p-~-nptG~--~~~~~~l~~l~~ 200 (343)
+...++ ++. . .+.+. ..+.+++++..+
T Consensus 86 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 118 (264)
T 3ucx_A 86 YGRVDVVI-NNAFRVPSMKPFANTTFEHMRDAIE 118 (264)
T ss_dssp TSCCSEEE-ECCCSCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCcEEE-ECCCCCCCCCCchhCCHHHHHHHHH
Confidence 344444 443 2 12222 356677766544
No 308
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=51.47 E-value=81 Score=26.82 Aligned_cols=93 Identities=13% Similarity=0.036 Sum_probs=46.4
Q ss_pred cEEEecChHHHH-HHHHHHhcCCCCeEEEeCCC----------CcchH---HHHHhcCceeEEeecCCCCCCCCCHHHHH
Q 019298 102 DVFVTSGCTQAI-DVAMALLSRPGANILLPRPG----------FPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIE 167 (343)
Q Consensus 102 ~i~~~~g~~~al-~~~~~~l~~~gd~vl~~~p~----------~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 167 (343)
.+++.+|++.+| ..+.+.|.+.|..|++..-. -.... ..+...+.++..+..+- -|.+.++
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~ 102 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNV-----ADWDQAA 102 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCT-----TSHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHH
Confidence 444444444444 44556677889888776433 22222 22333466666665432 2456665
Q ss_pred hhhcC------CceEEEEeCC-CCCcc--cccCHHHHHHHHH
Q 019298 168 SLADQ------NTVALVIINP-GNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 168 ~~~~~------~~~~i~~~~p-~nptG--~~~~~~~l~~l~~ 200 (343)
+.+.. +... ++++. ....+ ...+.+++++..+
T Consensus 103 ~~~~~~~~~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 143 (322)
T 3qlj_A 103 GLIQTAVETFGGLDV-LVNNAGIVRDRMIANTSEEEFDAVIA 143 (322)
T ss_dssp HHHHHHHHHHSCCCE-EECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 54432 3344 44444 22222 2356677665544
No 309
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=51.33 E-value=98 Score=25.21 Aligned_cols=66 Identities=11% Similarity=0.079 Sum_probs=33.7
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc----CceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR----HIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......... +.++..+..+- -|.+.+++.++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 77 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV-----ATPEGVDAVVE 77 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TSHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHH
Confidence 44566655554445556667778888776543322222222211 55555555432 24566655543
No 310
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=51.26 E-value=1e+02 Score=25.37 Aligned_cols=31 Identities=19% Similarity=0.225 Sum_probs=19.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeC
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPR 131 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~ 131 (343)
..+++|.|+...=..+.+.|.+.|..|++..
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 4455555555444556666778888887654
No 311
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=50.79 E-value=71 Score=26.39 Aligned_cols=94 Identities=13% Similarity=-0.012 Sum_probs=46.6
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCC-CCcchH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRP-GFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p-~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
..+++|.|++..=..+.+.|.+.|..|++..- .-.... ......+.++..+..+- -|.+.+++.+..
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV-----SQESEVEALFAAVIER 103 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 34555555444444556667788888776433 222111 22233456666665543 245555554432
Q ss_pred --CceEEEEeCC-CCCcc--cccCHHHHHHHHH
Q 019298 173 --NTVALVIINP-GNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 --~~~~i~~~~p-~nptG--~~~~~~~l~~l~~ 200 (343)
+...+ +++. ..+.+ ...+.+++++..+
T Consensus 104 ~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 104 WGRLDVL-VNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 34444 4444 22222 2356677766544
No 312
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=50.37 E-value=69 Score=30.03 Aligned_cols=78 Identities=13% Similarity=0.125 Sum_probs=46.9
Q ss_pred CCCCeEEEeCCCCcchHH-------HHHhcCceeEEeecC-CCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCH
Q 019298 122 RPGANILLPRPGFPIYEL-------SAAFRHIEVRHFDLL-PDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSY 192 (343)
Q Consensus 122 ~~gd~vl~~~p~~~~~~~-------~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~ 192 (343)
+++|.|++.....++... .....|+++...... -.-....|.++|...++. +|+.++..+ |-.
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvH-----Ge~--- 408 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWH-----GEV--- 408 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEES-----BCH---
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEc-----CCH---
Confidence 688999999887776532 233457776643200 011234577777776543 577777655 222
Q ss_pred HHHHHHHHHHhhcCc
Q 019298 193 QHLQKLAETANKLKT 207 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~ 207 (343)
..+.++++++++.|+
T Consensus 409 ~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 409 RHQMNFKWLAESMSR 423 (562)
T ss_dssp HHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHcCC
Confidence 456777778877664
No 313
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=49.71 E-value=1.1e+02 Score=25.15 Aligned_cols=55 Identities=9% Similarity=0.061 Sum_probs=29.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeecCC
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLP 155 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~ 155 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-......... .+.++..+..+-
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv 79 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDL 79 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC
Confidence 3445554444444455666778888887765443333222221 455666666543
No 314
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=49.53 E-value=1.4e+02 Score=26.59 Aligned_cols=90 Identities=16% Similarity=0.083 Sum_probs=43.2
Q ss_pred HHHHhhhCCCCCCCCcEEEecChHHHHHH-HHHHhcC-CCCeEEEeCCCCcc---------------hHHHHHhcCceeE
Q 019298 87 AEYLSRDLPYKLTPNDVFVTSGCTQAIDV-AMALLSR-PGANILLPRPGFPI---------------YELSAAFRHIEVR 149 (343)
Q Consensus 87 a~~~~~~~~~~~~~~~i~~~~g~~~al~~-~~~~l~~-~gd~vl~~~p~~~~---------------~~~~~~~~g~~~~ 149 (343)
.+|.+....+. ....+++.+|++.+|-. +.+.|.. .|..|++..-.-.. ....+...|..+.
T Consensus 34 i~~~~~~~~~~-~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~ 112 (405)
T 3zu3_A 34 IDYVTTEGPIA-NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAK 112 (405)
T ss_dssp HHHHHHHCCCT-TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHhcCCcC-CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceE
Confidence 35555432221 33455555555555544 4455666 78777654211111 1223445677777
Q ss_pred EeecCCCCCCCCCHHHHHhhhcC-----CceEEEEeCC
Q 019298 150 HFDLLPDKGWEVDLDDIESLADQ-----NTVALVIINP 182 (343)
Q Consensus 150 ~~~~~~~~~~~~d~~~l~~~~~~-----~~~~i~~~~p 182 (343)
.+..+- -|.+.+++.+.. ..--++++|.
T Consensus 113 ~i~~Dv-----td~~~v~~~v~~i~~~~G~IDiLVNNA 145 (405)
T 3zu3_A 113 SINGDA-----FSDEIKQLTIDAIKQDLGQVDQVIYSL 145 (405)
T ss_dssp EEESCT-----TSHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred EEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEEcC
Confidence 666543 245555544432 3334555554
No 315
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=49.17 E-value=1.1e+02 Score=24.96 Aligned_cols=64 Identities=16% Similarity=0.046 Sum_probs=31.2
Q ss_pred EEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc--hHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 103 VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI--YELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~--~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
+++|.|+...=..+.+.|.+.|..|++..-.-.. ..... ...+.++..+..+- -|.+.+++.+.
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 73 (258)
T 3a28_C 5 AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV-----TDKANFDSAID 73 (258)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHH
Confidence 4555444444445556677778777765433222 22222 22255566555432 24555555443
No 316
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=47.99 E-value=1.2e+02 Score=25.30 Aligned_cols=93 Identities=14% Similarity=0.081 Sum_probs=44.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.+..
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDV-----TDEDGIQAMVAQIESEV 109 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 34555555544445556667778888776543322222221 22344555554432 245666555432
Q ss_pred -CceEEEEeCCC-CCcc--cccCHHHHHHHH
Q 019298 173 -NTVALVIINPG-NPCG--NVYSYQHLQKLA 199 (343)
Q Consensus 173 -~~~~i~~~~p~-nptG--~~~~~~~l~~l~ 199 (343)
+...+ +++.. .+.+ ...+.+++++..
T Consensus 110 g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~ 139 (291)
T 3cxt_A 110 GIIDIL-VNNAGIIRRVPMIEMTAAQFRQVI 139 (291)
T ss_dssp CCCCEE-EECCCCCCCCCGGGSCHHHHHHHH
T ss_pred CCCcEE-EECCCcCCCCCcccCCHHHHHHHH
Confidence 34444 44442 2222 124566666543
No 317
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=47.81 E-value=69 Score=26.40 Aligned_cols=93 Identities=13% Similarity=0.037 Sum_probs=46.7
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEe-CCCCcch---HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLP-RPGFPIY---ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~-~p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
.+++|.|++..=..+.+.|.+.|..|++. ...-... .......+.++..+..+-. |.+.+++.++.
T Consensus 20 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 20 VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIR-----QVPEIVKLFDQAVAHF 94 (270)
T ss_dssp EEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHc
Confidence 44455444444445566677888888764 2222211 2223334666766665432 45565554432
Q ss_pred -CceEEEEeCC-CCCccc--ccCHHHHHHHHH
Q 019298 173 -NTVALVIINP-GNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 -~~~~i~~~~p-~nptG~--~~~~~~l~~l~~ 200 (343)
+... ++++. ..+.+. .++.+++++..+
T Consensus 95 g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 95 GHLDI-AVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp SCCCE-EECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3344 44444 222222 346677776655
No 318
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=47.33 E-value=89 Score=25.84 Aligned_cols=31 Identities=19% Similarity=0.196 Sum_probs=19.4
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeC
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPR 131 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~ 131 (343)
..+++|.|++..=..+.+.|.+.|..|++..
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 3455555555444555666778898887754
No 319
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=47.33 E-value=90 Score=25.92 Aligned_cols=65 Identities=11% Similarity=-0.040 Sum_probs=38.4
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.+
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 70 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDV-----RSLQDQKRAA 70 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCC-----CCHHHHHHHH
Confidence 3456665555555556666778898888776554444555555566666665543 2455555444
No 320
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=47.20 E-value=1.1e+02 Score=24.95 Aligned_cols=97 Identities=11% Similarity=0.007 Sum_probs=48.0
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----c-CceeEEeecCCCCCCCCCHHHHHhhhcC-
Q 019298 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----R-HIEVRHFDLLPDKGWEVDLDDIESLADQ- 172 (343)
Q Consensus 99 ~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~- 172 (343)
....+++|.|++..=..+.+.|.+.|..|++..-.-......... . +.++..+..+- -|.+.+++.++.
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV-----LDALQVRAFAEAC 81 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC-----CCHHHHHHHHHHH
Confidence 334455555555444556666778888887765443332222221 2 22355555432 245555544431
Q ss_pred -----CceEEEEeCC-CCCccc--ccCHHHHHHHHHH
Q 019298 173 -----NTVALVIINP-GNPCGN--VYSYQHLQKLAET 201 (343)
Q Consensus 173 -----~~~~i~~~~p-~nptG~--~~~~~~l~~l~~~ 201 (343)
+...+ +++. ..+.+. ..+.+++++..+.
T Consensus 82 ~~~~g~id~l-vnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 82 ERTLGCASIL-VNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHHCSCSEE-EECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 33444 4444 232222 3566777665553
No 321
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=47.18 E-value=42 Score=29.18 Aligned_cols=79 Identities=16% Similarity=0.123 Sum_probs=48.7
Q ss_pred CCCCcchHHHHHhc-CceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcE
Q 019298 131 RPGFPIYELSAAFR-HIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (343)
Q Consensus 131 ~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 208 (343)
-|+|.......... +.++..+-+.+. .-.+.+.+++. ...+.+++.+.+-| .++.+++.++++++++.
T Consensus 64 vpvy~sv~ea~~~~p~~DlaVi~vp~~----~a~~ai~ea~~~~Gv~~vViiT~G~~------e~~~~~l~~~a~~~g~r 133 (334)
T 3mwd_B 64 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGIP------EALTRKLIKKADQKGVT 133 (334)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCCC------HHHHHHHHHHHHHHTCE
T ss_pred ceeeCCHHHHhhcCCCCcEEEEecCHH----HHHHHHHHHHHHCCCCEEEEECCCCC------HHHHHHHHHHHHHcCCE
Confidence 36666666655443 345444433221 11456666666 57777776554433 36778999999999998
Q ss_pred EEEccCCCccc
Q 019298 209 VIADEVYGHLV 219 (343)
Q Consensus 209 ~i~D~ay~~~~ 219 (343)
+|==++.+...
T Consensus 134 liGPNc~Gii~ 144 (334)
T 3mwd_B 134 IIGPATVGGIK 144 (334)
T ss_dssp EECSSCCCEEE
T ss_pred EEccCCccccC
Confidence 88777776543
No 322
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=47.00 E-value=32 Score=29.33 Aligned_cols=51 Identities=16% Similarity=0.243 Sum_probs=36.9
Q ss_pred HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+.++++.+.+.+.+++.+. | ++.++.+++.+.++++++.++-..+.+...
T Consensus 85 ~~~v~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~A~~~gi~viGPNc~Gii~ 135 (297)
T 2yv2_A 85 PDAVYEAVDAGIRLVVVITE----G--IPVHDTMRFVNYARQKGATIIGPNCPGAIT 135 (297)
T ss_dssp HHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHHTCEEECSSSCEEEE
T ss_pred HHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEcCCCCeeEc
Confidence 66777777778886665443 3 244678899999999999888777765443
No 323
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=46.68 E-value=1.1e+02 Score=24.52 Aligned_cols=66 Identities=9% Similarity=-0.015 Sum_probs=32.9
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.++
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 80 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI-----TSEQELSALAD 80 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHH
Confidence 34555544444344556667788887776543322222211 22344555554432 24566666553
No 324
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=46.66 E-value=1.1e+02 Score=24.87 Aligned_cols=96 Identities=11% Similarity=-0.040 Sum_probs=46.5
Q ss_pred CCcEEEecCh-HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeecCCCCCCCCCHHHHHhhhcC--
Q 019298 100 PNDVFVTSGC-TQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLADQ-- 172 (343)
Q Consensus 100 ~~~i~~~~g~-~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-- 172 (343)
...+++|.|+ +..=..+.+.|.+.|..|++..-.-......... .+.++..+..+-. |.+.+++.++.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~ 96 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVT-----STEAVDALITQTV 96 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCC-----CHHHHHHHHHHHH
Confidence 3455565553 3333455566777888887765443333332222 1345555555432 45555554432
Q ss_pred ----CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 019298 173 ----NTVALVIINPGNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 ----~~~~i~~~~p~nptG~--~~~~~~l~~l~~ 200 (343)
+...++.+....+.+. ..+.+++++..+
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLN 130 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3344443332222222 346677665544
No 325
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=46.56 E-value=1.1e+02 Score=24.57 Aligned_cols=66 Identities=17% Similarity=0.058 Sum_probs=35.8
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.+.
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 78 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDV-----SDPESAKAMAD 78 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHH
Confidence 44555555554445556667788888877654433333222 22356666665543 24555555443
No 326
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=46.55 E-value=1.2e+02 Score=25.02 Aligned_cols=95 Identities=15% Similarity=0.086 Sum_probs=47.6
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCC-cchHHHHHh----cCceeEEeecCCCCCCCCCHHHHHhhhcC--
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF-PIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLADQ-- 172 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~-~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-- 172 (343)
...+++|.|++..=..+.+.|.+.|..|++..-.- ......... .+.++..+..+- -|.+.+++.+..
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-----TKPSEIADMMAMVA 99 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-----CCHHHHHHHHHHHH
Confidence 34556665555555556667778898888765422 222222211 145555554432 245666554432
Q ss_pred ----CceEEEEeCC-CCCccc--ccCHHHHHHHHH
Q 019298 173 ----NTVALVIINP-GNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 ----~~~~i~~~~p-~nptG~--~~~~~~l~~l~~ 200 (343)
+...++ ++. ..+.+. .++.+++++..+
T Consensus 100 ~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 133 (281)
T 3v2h_A 100 DRFGGADILV-NNAGVQFVEKIEDFPVEQWDRIIA 133 (281)
T ss_dssp HHTSSCSEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHCCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 344444 444 222222 246677665444
No 327
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=46.33 E-value=1.2e+02 Score=24.91 Aligned_cols=94 Identities=11% Similarity=0.002 Sum_probs=47.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCC------------cch---HHHHHhcCceeEEeecCCCCCCCCCHHH
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF------------PIY---ELSAAFRHIEVRHFDLLPDKGWEVDLDD 165 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~------------~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 165 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.- ... .......+.++..+..+- -|.+.
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~ 85 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDV-----KDRAA 85 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCC-----CCHHH
Confidence 3455555554444556667778888877654321 011 112233466666665543 24555
Q ss_pred HHhhhcC------CceEEEEeCC-CCCcc--cccCHHHHHHHHH
Q 019298 166 IESLADQ------NTVALVIINP-GNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 166 l~~~~~~------~~~~i~~~~p-~nptG--~~~~~~~l~~l~~ 200 (343)
+++.++. +...++ ++. ..+.+ ...+.+++++..+
T Consensus 86 v~~~~~~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAI-TNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEE-ECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 5554432 344444 444 22222 2356677765444
No 328
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=46.08 E-value=1.2e+02 Score=24.81 Aligned_cols=66 Identities=17% Similarity=0.004 Sum_probs=33.5
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
...+++|.++...=..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.+
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~ 99 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC-----SNREDIYSSA 99 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeC-----CCHHHHHHHH
Confidence 345555555444445556667778888776544322222222 22355555555432 2455555544
No 329
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=45.89 E-value=1.1e+02 Score=24.41 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=17.7
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCC
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRP 132 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p 132 (343)
.+++|.++...=..+.+.|.+.|..|++..-
T Consensus 8 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 8 VAIITGGTLGIGLAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 4455544444334555667778877776543
No 330
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=45.74 E-value=14 Score=33.64 Aligned_cols=33 Identities=18% Similarity=0.396 Sum_probs=28.4
Q ss_pred CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.-.|.. +++++|++-|+++|+-||+|-++-+..
T Consensus 71 ~~~Gt~---~df~~lv~~aH~~Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 71 TRSGNE---DEFRNMVTRCNNVGVRIYVDAVINHMC 103 (496)
T ss_dssp BTTBCH---HHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CCCCCH---HHHHHHHHHHHHCCCEEEEEEccCcCC
Confidence 345655 999999999999999999999998754
No 331
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=45.54 E-value=1.2e+02 Score=24.44 Aligned_cols=93 Identities=11% Similarity=-0.015 Sum_probs=43.3
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCC-CCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRP-GFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p-~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
.+++|.++...=..+.+.|.+.|..|++..- .-....... ...+.++..+..+- -|.+.+++.++.
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 6 VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADV-----ANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHc
Confidence 3455544444444455667778887776532 222222221 22355555555432 245666655432
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHH
Q 019298 173 -NTVALVIINPGNPCGN--VYSYQHLQKLA 199 (343)
Q Consensus 173 -~~~~i~~~~p~nptG~--~~~~~~l~~l~ 199 (343)
+...++.+....+.+. ..+.+++++..
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 110 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVI 110 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 3444443322222221 24556655543
No 332
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=45.12 E-value=1.3e+02 Score=25.25 Aligned_cols=50 Identities=14% Similarity=0.088 Sum_probs=38.8
Q ss_pred CCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEcc
Q 019298 158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (343)
Q Consensus 158 ~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ 213 (343)
+|-+|..++.++...+...|++... .++.++++++.+.|++.|+-++++-
T Consensus 127 dfi~d~~qi~ea~~~GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 127 DFLFDPYQVYEARSWGADCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SCCCSTHHHHHHHHTTCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCHHHHHHHHHcCCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 4567878888877667777776543 3466899999999999999888775
No 333
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=45.01 E-value=1.3e+02 Score=24.89 Aligned_cols=95 Identities=11% Similarity=-0.002 Sum_probs=49.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCc-------ch---HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP-------IY---ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~-------~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-. .. .......+.++..+..+-. |.+.+++.+
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~ 84 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR-----DGDAVAAAV 84 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT-----SHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHH
Confidence 44556655555445566677788888776543332 11 2223344667777765432 455555544
Q ss_pred cC------CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 019298 171 DQ------NTVALVIINPGNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 171 ~~------~~~~i~~~~p~nptG~--~~~~~~l~~l~~ 200 (343)
.. +...++.+......+. ..+.+++++..+
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 32 3444443333222222 356777776554
No 334
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=44.73 E-value=1.3e+02 Score=24.74 Aligned_cols=93 Identities=14% Similarity=-0.014 Sum_probs=46.0
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------ 172 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------ 172 (343)
.+++|.|++..=..+.+.|.+.|..|++..-.-...... +...+.++..+..+- -|.+.+++.+..
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 30 VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV-----NDATAVDALVESTLKEFG 104 (270)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 444444444444455566778888887765443322222 223355555555432 245555554432
Q ss_pred CceEEEEeCC-CCCcc--cccCHHHHHHHHH
Q 019298 173 NTVALVIINP-GNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 ~~~~i~~~~p-~nptG--~~~~~~~l~~l~~ 200 (343)
+... ++++. ....+ ...+.+++++..+
T Consensus 105 ~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (270)
T 3ftp_A 105 ALNV-LVNNAGITQDQLAMRMKDDEWDAVID 134 (270)
T ss_dssp CCCE-EEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3444 44444 22222 2356677766544
No 335
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=44.56 E-value=1.3e+02 Score=24.51 Aligned_cols=94 Identities=15% Similarity=0.133 Sum_probs=46.5
Q ss_pred cEEEecChHHHH-HHHHHHhcCCCCeEEEeCCCCcchHHHHHh---cCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 102 DVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAF---RHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 102 ~i~~~~g~~~al-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
.+++.+|++.+| ..+.+.|.+.|..|++..-.-......... .+.++..+..+- -|.+.+++.+..
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDV-----RNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHHc
Confidence 444444544444 455666778888887765443333333222 344566555443 245555554432
Q ss_pred -CceEEEEeCCC-CCcc--cccCHHHHHHHHHH
Q 019298 173 -NTVALVIINPG-NPCG--NVYSYQHLQKLAET 201 (343)
Q Consensus 173 -~~~~i~~~~p~-nptG--~~~~~~~l~~l~~~ 201 (343)
+...+ +++.. ...+ ...+.+++++..+.
T Consensus 82 g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 82 GRIDIL-INNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp SCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 33444 44442 2222 23566777665543
No 336
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=44.51 E-value=79 Score=27.32 Aligned_cols=38 Identities=21% Similarity=0.093 Sum_probs=32.2
Q ss_pred CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
-.+|.|-..+.+.+.++++.|+++|+-+++|--|++.+
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~W 86 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTW 86 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCc
Confidence 46788888888999999999999999999997776543
No 337
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=44.49 E-value=1.2e+02 Score=24.21 Aligned_cols=94 Identities=10% Similarity=-0.003 Sum_probs=44.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
..+++|.++...=..+.+.|.+.|..|++..-.-......... .+.++..+..+- -|.+.+++.++.
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL-----LSEESINKAFEEIYNL 82 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC-----CCHHHHHHHHHHHHHh
Confidence 3455554444444455566777888777654332222222111 355555555432 256666665542
Q ss_pred --CceEEEEeCCCCCcc--cccCHHHHHHHH
Q 019298 173 --NTVALVIINPGNPCG--NVYSYQHLQKLA 199 (343)
Q Consensus 173 --~~~~i~~~~p~nptG--~~~~~~~l~~l~ 199 (343)
+...++.+....+.+ ...+.+++++..
T Consensus 83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~ 113 (248)
T 2pnf_A 83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVL 113 (248)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHH
Confidence 445555443322222 124555554443
No 338
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=44.19 E-value=1.3e+02 Score=24.55 Aligned_cols=95 Identities=16% Similarity=0.081 Sum_probs=46.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH---hcC-ceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA---FRH-IEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~g-~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-........ ..+ .++..+..+- -|.+.+++.+..
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDV-----SDRAQCDALAGRAVEE 85 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 345555555444455566677888888776544333222222 222 3555555432 245555554431
Q ss_pred --CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 019298 173 --NTVALVIINPGNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 --~~~~i~~~~p~nptG--~~~~~~~l~~l~~ 200 (343)
+...++.+-...+.+ ...+.+++++..+
T Consensus 86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 344444332222222 2346677665544
No 339
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=43.88 E-value=22 Score=30.30 Aligned_cols=51 Identities=14% Similarity=0.134 Sum_probs=36.1
Q ss_pred HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+.++++++.+.+.+++.+. |. +.++.+++.+.++++++.++-..+.+...
T Consensus 84 ~~~v~ea~~~Gi~~vVi~t~----G~--~~~~~~~l~~~A~~~gi~viGPNc~Gii~ 134 (294)
T 2yv1_A 84 KDAVFEAIDAGIELIVVITE----HI--PVHDTMEFVNYAEDVGVKIIGPNTPGIAS 134 (294)
T ss_dssp HHHHHHHHHTTCSEEEECCS----CC--CHHHHHHHHHHHHHHTCEEECSSCCEEEE
T ss_pred HHHHHHHHHCCCCEEEEECC----CC--CHHHHHHHHHHHHHcCCEEEcCCCceeec
Confidence 56667777777886665443 32 44678899999999999888787765443
No 340
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=43.74 E-value=1.5e+02 Score=25.10 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=46.9
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCC-------C-----cch---HHHHHhcCceeEEeecCCCCCCCCCHHH
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPG-------F-----PIY---ELSAAFRHIEVRHFDLLPDKGWEVDLDD 165 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~-------~-----~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 165 (343)
..++||.|++..=..+.+.|.+.|..|++.+-. + ... .......+.++..+..+-. |.+.
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~ 121 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVR-----DLAS 121 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC-----CHHH
Confidence 344555554444455566677888888765322 1 011 1122334666666655432 4555
Q ss_pred HHhhhcC------CceEEEEeCC-CCCcc--cccCHHHHHHHHH
Q 019298 166 IESLADQ------NTVALVIINP-GNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 166 l~~~~~~------~~~~i~~~~p-~nptG--~~~~~~~l~~l~~ 200 (343)
+++.+.. +...+ +++. ....+ ..++.++++++.+
T Consensus 122 v~~~~~~~~~~~g~iD~l-VnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDIL-VSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp HHHHHHHHHHHHSCCCEE-EECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 5554432 34444 4444 22222 2356677766554
No 341
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=43.62 E-value=81 Score=25.67 Aligned_cols=92 Identities=20% Similarity=0.113 Sum_probs=46.8
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEE
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVAL 177 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i 177 (343)
.+++|.+++..=..+.+.|.+.|..|++..- .........+.++..+..+-. |.+.+++.++. ...-+
T Consensus 11 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~g~id~ 82 (257)
T 3tl3_A 11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVADLGDRARFAAADVT-----DEAAVASALDLAETMGTLRI 82 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHTCTTEEEEECCTT-----CHHHHHHHHHHHHHHSCEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---chHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHhCCCCE
Confidence 4455544444444556667778877776543 223444555666666655432 45555554431 23334
Q ss_pred EEeCCC-CCccc------ccCHHHHHHHHHH
Q 019298 178 VIINPG-NPCGN------VYSYQHLQKLAET 201 (343)
Q Consensus 178 ~~~~p~-nptG~------~~~~~~l~~l~~~ 201 (343)
++++.. ...+. .++.+++++..+.
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 113 (257)
T 3tl3_A 83 VVNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113 (257)
T ss_dssp EEECGGGSHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred EEECCCCCCCcccccccccCCHHHHHHHHHH
Confidence 445442 21111 1566777766553
No 342
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=43.43 E-value=1.1e+02 Score=25.15 Aligned_cols=31 Identities=23% Similarity=0.460 Sum_probs=18.1
Q ss_pred cEEEecChHHHH-HHHHHHhcCCCCeEEEeCC
Q 019298 102 DVFVTSGCTQAI-DVAMALLSRPGANILLPRP 132 (343)
Q Consensus 102 ~i~~~~g~~~al-~~~~~~l~~~gd~vl~~~p 132 (343)
.+++.+|++.+| ..+.+.|.+.|..|++..-
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 344444544444 4555667778888776543
No 343
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=43.40 E-value=1.3e+02 Score=24.47 Aligned_cols=66 Identities=21% Similarity=0.096 Sum_probs=33.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh---c--CceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---R--HIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~--g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-......... . +.++..+..+- -|.+.+++.++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 84 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-----SDEAQVEAYVT 84 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-----TSHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccC-----CCHHHHHHHHH
Confidence 3455555544444555666777888877654332222222221 1 55555555432 24566655543
No 344
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=43.13 E-value=1.3e+02 Score=24.36 Aligned_cols=95 Identities=13% Similarity=0.021 Sum_probs=46.6
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhc-----
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLAD----- 171 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----- 171 (343)
...+++|.++...=..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.+.
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL-----SSRSERQELMNTVANH 83 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 345566655555445556667778888776543322222222 22355666665432 24556655543
Q ss_pred --CCceEEEEeCCC-CCcc--cccCHHHHHHHHH
Q 019298 172 --QNTVALVIINPG-NPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 172 --~~~~~i~~~~p~-nptG--~~~~~~~l~~l~~ 200 (343)
.+...+ +++.. .+.+ ...+.+++++..+
T Consensus 84 ~~g~id~l-v~~Ag~~~~~~~~~~~~~~~~~~~~ 116 (260)
T 2ae2_A 84 FHGKLNIL-VNNAGIVIYKEAKDYTVEDYSLIMS 116 (260)
T ss_dssp TTTCCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCCEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 234444 44442 2222 2345666665443
No 345
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=42.89 E-value=1.4e+02 Score=24.69 Aligned_cols=66 Identities=9% Similarity=-0.100 Sum_probs=35.6
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh---cCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---RHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-......... .+.++..+..+- -|.+.+++.+.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 97 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADV-----SDELQMRNAVR 97 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHH
Confidence 3455555555444555666778888887765444333333322 345666665543 24555555443
No 346
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=42.88 E-value=1.2e+02 Score=24.58 Aligned_cols=63 Identities=10% Similarity=0.024 Sum_probs=31.9
Q ss_pred EEecChHHHH-HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 104 FVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 104 ~~~~g~~~al-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
++.+|++.+| ..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.+.
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 66 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDV-----RNRAAIEEMLA 66 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHH
Confidence 3444444444 445556677888877654333333333333343455554432 25666666554
No 347
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=42.56 E-value=1.2e+02 Score=23.71 Aligned_cols=95 Identities=9% Similarity=0.049 Sum_probs=49.6
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC-HHHHHhhhcCCceEEEEe
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD-LDDIESLADQNTVALVII 180 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~~~~~~~~i~~~ 180 (343)
+|++|.++...=..+++.|.+.|..|....-.-..... ..+.. .+..+- -| .+.++++++ +...++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~--~~~~D~-----~d~~~~~~~~~~-~~d~vi~~ 70 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---YNNVK--AVHFDV-----DWTPEEMAKQLH-GMDAIINV 70 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---CTTEE--EEECCT-----TSCHHHHHTTTT-TCSEEEEC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---cCCce--EEEecc-----cCCHHHHHHHHc-CCCEEEEC
Confidence 35666554444445566777788777655433221111 12333 333321 24 678888776 46666655
Q ss_pred CCC-CCcccccCHHHHHHHHHHHhhcCc
Q 019298 181 NPG-NPCGNVYSYQHLQKLAETANKLKT 207 (343)
Q Consensus 181 ~p~-nptG~~~~~~~l~~l~~~~~~~~~ 207 (343)
... .+.-......-...+++.|++.+.
T Consensus 71 ag~~~~~~~~~n~~~~~~l~~a~~~~~~ 98 (219)
T 3dqp_A 71 SGSGGKSLLKVDLYGAVKLMQAAEKAEV 98 (219)
T ss_dssp CCCTTSSCCCCCCHHHHHHHHHHHHTTC
T ss_pred CcCCCCCcEeEeHHHHHHHHHHHHHhCC
Confidence 442 222222233456778888887764
No 348
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=42.55 E-value=1.4e+02 Score=24.57 Aligned_cols=99 Identities=12% Similarity=-0.016 Sum_probs=47.3
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhc--CC
Q 019298 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QN 173 (343)
Q Consensus 99 ~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~ 173 (343)
....+++|.|++..=..+.+.|.+.|..|++..-.-....... ...+.++..+..+-.+. -+.+.+.+.+. .+
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEA--GAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTST--THHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCH--HHHHHHHHHHHHhCC
Confidence 3344555555554445566667788888877654433333322 23466666665543221 12233322221 13
Q ss_pred ceEEEEeCCC-CCcc--cccCHHHHHHHHH
Q 019298 174 TVALVIINPG-NPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 174 ~~~i~~~~p~-nptG--~~~~~~~l~~l~~ 200 (343)
...+ +++.. ...+ ...+.+++++..+
T Consensus 110 iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 110 VDIL-VINASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp CCEE-EECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 3444 44442 2222 2356677766554
No 349
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=42.39 E-value=1.4e+02 Score=24.57 Aligned_cols=64 Identities=8% Similarity=-0.036 Sum_probs=32.8
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
.+++|.|+...=..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.+
T Consensus 46 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~d~~~v~~~~ 112 (285)
T 2c07_A 46 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV-----SKKEEISEVI 112 (285)
T ss_dssp EEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCC-----CCHHHHHHHH
Confidence 4555555444444556667788888876532222222221 22255566555432 2456666655
No 350
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=42.22 E-value=31 Score=29.26 Aligned_cols=51 Identities=18% Similarity=0.216 Sum_probs=36.5
Q ss_pred HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+.++++++.+.+.+++.+. | ++.++.+++.+.++++++.++-..+.+...
T Consensus 78 ~~~~~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~a~~~gi~vigPNc~Gii~ 128 (288)
T 1oi7_A 78 ADAALEAAHAGIPLIVLITE----G--IPTLDMVRAVEEIKALGSRLIGGNCPGIIS 128 (288)
T ss_dssp HHHHHHHHHTTCSEEEECCS----C--CCHHHHHHHHHHHHHHTCEEEESSSCEEEE
T ss_pred HHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEeCCCCeEEc
Confidence 56666777777886665443 3 244678899999999999888888766543
No 351
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=42.12 E-value=1.5e+02 Score=24.75 Aligned_cols=33 Identities=15% Similarity=0.283 Sum_probs=19.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCC
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPG 133 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~ 133 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~ 59 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN 59 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 345555544444455566677788888766433
No 352
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=42.06 E-value=1.2e+02 Score=24.55 Aligned_cols=95 Identities=14% Similarity=0.083 Sum_probs=45.2
Q ss_pred cEEEecChHHHHHHHHHHhcC---CCCeEEEeCCCCcchHHHHHhc-----CceeEEeecCCCCCCCCCHHHHHhhhc--
Q 019298 102 DVFVTSGCTQAIDVAMALLSR---PGANILLPRPGFPIYELSAAFR-----HIEVRHFDLLPDKGWEVDLDDIESLAD-- 171 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~---~gd~vl~~~p~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~d~~~l~~~~~-- 171 (343)
.+++|.+++..=..+.+.|.+ .|..|++..-.-.......... +.++..+..+-. |.+.+++.+.
T Consensus 8 ~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~ 82 (259)
T 1oaa_A 8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG-----TEAGVQRLLSAV 82 (259)
T ss_dssp EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTT-----SHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCC-----CHHHHHHHHHHH
Confidence 344554444443445556666 7888877644332222222221 556666655432 4455554332
Q ss_pred -C-----Cce-EEEEeCCCC--Cc-c---cccCHHHHHHHHHH
Q 019298 172 -Q-----NTV-ALVIINPGN--PC-G---NVYSYQHLQKLAET 201 (343)
Q Consensus 172 -~-----~~~-~i~~~~p~n--pt-G---~~~~~~~l~~l~~~ 201 (343)
+ +.. .+++++... +. + ...+.+++++..+.
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~ 125 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHH
T ss_pred HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHH
Confidence 1 122 155555531 21 1 11466777776553
No 353
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=41.74 E-value=1.8e+02 Score=26.35 Aligned_cols=95 Identities=18% Similarity=0.177 Sum_probs=55.3
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcch-HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298 98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY-ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (343)
Q Consensus 98 ~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 176 (343)
+....|++..|+..+...+ +.|.+.|-.|.+.+|....- .......+..+..-. ...+.+. +..
T Consensus 10 l~~~~vlVvGgG~va~~k~-~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~--------~~~~~l~-----~~~- 74 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKA-RLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGP--------FDETLLD-----SCW- 74 (457)
T ss_dssp CBTCEEEEECCSHHHHHHH-HHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESS--------CCGGGGT-----TCS-
T ss_pred CCCCEEEEECCCHHHHHHH-HHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECC--------CCccccC-----Ccc-
Confidence 3456788888888888775 55667788888877765432 222222233333211 1222222 223
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEE-EEccC
Q 019298 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLV-IADEV 214 (343)
Q Consensus 177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~-i~D~a 214 (343)
+++..|++| +.-..+++.|+++++++ ++|+.
T Consensus 75 lVi~at~~~-------~~n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 75 LAIAATDDD-------TVNQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp EEEECCSCH-------HHHHHHHHHHHHTTCEEEETTCT
T ss_pred EEEEcCCCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 445566665 33567888899999886 56665
No 354
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=41.68 E-value=93 Score=24.48 Aligned_cols=8 Identities=25% Similarity=0.630 Sum_probs=3.3
Q ss_pred EEEecChH
Q 019298 103 VFVTSGCT 110 (343)
Q Consensus 103 i~~~~g~~ 110 (343)
|+++.|++
T Consensus 54 VIISRGgt 61 (196)
T 2q5c_A 54 AIISRGAT 61 (196)
T ss_dssp EEEEEHHH
T ss_pred EEEECChH
Confidence 44444433
No 355
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=41.35 E-value=27 Score=29.97 Aligned_cols=51 Identities=20% Similarity=0.211 Sum_probs=37.3
Q ss_pred HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc-CcEEEEccCCCccc
Q 019298 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-KTLVIADEVYGHLV 219 (343)
Q Consensus 163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~~i~D~ay~~~~ 219 (343)
.+.+++++..+.+.+++.++.- +.++.+++.+.++++ |+.+|-+.+.+...
T Consensus 85 ~~~~~e~i~~Gi~~iv~~t~G~------~~~~~~~l~~~a~~~~gi~liGPnc~Gii~ 136 (305)
T 2fp4_A 85 AAAINEAIDAEVPLVVCITEGI------PQQDMVRVKHRLLRQGKTRLIGPNCPGVIN 136 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCCCC------CHHHHHHHHHHHTTCSSCEEECSSSCEEEE
T ss_pred HHHHHHHHHCCCCEEEEECCCC------ChHHHHHHHHHHHhcCCcEEEeCCCCeEec
Confidence 5556667777788877666532 335677999999999 99988888876544
No 356
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=41.34 E-value=75 Score=24.03 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=39.3
Q ss_pred cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccC
Q 019298 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214 (343)
Q Consensus 144 ~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~a 214 (343)
.|+.+..+.-.++++ + .++...+.++...++++.| .|.|......+...|.+.|-.|+++++..-+
T Consensus 56 ~Gl~v~~v~k~~eGG---~-p~I~d~I~~geIdlVInt~-~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 121 (152)
T 1b93_A 56 TGMNVNAMLSGPMGG---D-QQVGALISEGKIDVLIFFW-DPLNAVPHDPDVKALLRLATVWNIPVATNVA 121 (152)
T ss_dssp HCCCCEEECCGGGTH---H-HHHHHHHHTTCCCEEEEEC-CTTSCCTTHHHHHHHHHHHHHTTCCEESSHH
T ss_pred hCceeEEEEecCCCC---C-chHHHHHHCCCccEEEEcC-CcccCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 566666664222211 2 3455666655444455544 3334333368899999999999999876533
No 357
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=41.33 E-value=1.2e+02 Score=24.38 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=46.0
Q ss_pred CCcEEEecChHHHH-HHHHHHhcCCCCeEEEeC-CCCcchH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--
Q 019298 100 PNDVFVTSGCTQAI-DVAMALLSRPGANILLPR-PGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-- 172 (343)
Q Consensus 100 ~~~i~~~~g~~~al-~~~~~~l~~~gd~vl~~~-p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-- 172 (343)
.+..++.+|++.+| ..+.+.|.+.|..|++.. ..-.... ......+.++..+..+- -|.+.+++.++.
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 86 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNV-----GDWDSTKQAFDKVK 86 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCC-----CCHHHHHHHHHHHH
Confidence 44555555555554 445566777887776643 3332222 22333455666555432 245555554432
Q ss_pred ---CceEEEEeCCC-CCcc--cccCHHHHHHHHH
Q 019298 173 ---NTVALVIINPG-NPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 ---~~~~i~~~~p~-nptG--~~~~~~~l~~l~~ 200 (343)
...-+++++.. ...+ ...+.+++++..+
T Consensus 87 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 87 AEVGEIDVLVNNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp HHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 22334445442 2222 2245666655544
No 358
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=41.01 E-value=1.4e+02 Score=24.02 Aligned_cols=66 Identities=11% Similarity=0.138 Sum_probs=33.8
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-...... ++..+.++..+..+- -|.+.+++.++
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~ 82 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDV-----TNTESVQNAVR 82 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHH
Confidence 4455655544444455666777888877664332222221 222355555555432 24566665553
No 359
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=40.90 E-value=1.4e+02 Score=24.13 Aligned_cols=32 Identities=28% Similarity=0.227 Sum_probs=19.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCC
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p 132 (343)
..+++|.++...=..+.+.|.+.|..|++..-
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSR 39 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 34555555444445556667778888776543
No 360
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=40.66 E-value=1.5e+02 Score=24.34 Aligned_cols=31 Identities=19% Similarity=0.298 Sum_probs=18.5
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCC
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRP 132 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p 132 (343)
.+++|.|+...=..+.+.|.+.|..|++..-
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 8 TVIITGSSNGIGRTTAILFAQEGANVTITGR 38 (280)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 4455554444444556667778888776543
No 361
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=40.03 E-value=1.6e+02 Score=24.40 Aligned_cols=65 Identities=20% Similarity=0.162 Sum_probs=33.4
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc----CceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR----HIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......... +.++..+..+- -|.+.+++.+
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~ 95 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-----RDPDMVQNTV 95 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCHHHHHHHH
Confidence 34555555444444556667778888776654332222222211 55565555432 2456665544
No 362
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=40.00 E-value=1.5e+02 Score=24.09 Aligned_cols=96 Identities=7% Similarity=0.021 Sum_probs=48.8
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEe-CCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLP-RPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~-~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
..+++|.|++..=..+.+.|.+.|..|++. ...-...... ....+.++..+..+- -|.+.+++.+..
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADL-----TNAAEVEAAISAAADK 83 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 345555555544455666677888888776 4333322222 223355666665443 245666555432
Q ss_pred -CceEEEEeCCC-C-Cccc--ccCHHHHHHHHHH
Q 019298 173 -NTVALVIINPG-N-PCGN--VYSYQHLQKLAET 201 (343)
Q Consensus 173 -~~~~i~~~~p~-n-ptG~--~~~~~~l~~l~~~ 201 (343)
...-+++++.. . +.+. ..+.+++++..+.
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 117 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDV 117 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHH
Confidence 23334444442 2 2222 3566777766553
No 363
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=39.86 E-value=16 Score=35.69 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++-|+++|+-||.|-+|.+..
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~NHt~ 342 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFNHVY 342 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4899999999999999999999998754
No 364
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=39.83 E-value=20 Score=34.94 Aligned_cols=28 Identities=25% Similarity=0.301 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++.|+++|+-||.|-+|-+..
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 281 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTA 281 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 4999999999999999999999997643
No 365
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=39.47 E-value=1.6e+02 Score=24.21 Aligned_cols=97 Identities=14% Similarity=0.071 Sum_probs=49.3
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe-CCCCcchH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-
Q 019298 98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLP-RPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ- 172 (343)
Q Consensus 98 ~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~-~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~- 172 (343)
+....+++|.|++..=..+.+.|.+.|..|++. ...-.... ......|.++..+..+- -|.+.+++.+..
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADN-----RDAEAIEQAIRET 103 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 343455555555544455666677889887765 32222122 22233466666666543 245666555432
Q ss_pred -----CceEEEEeCCC-CCcc--cccCHHHHHHHHH
Q 019298 173 -----NTVALVIINPG-NPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 -----~~~~i~~~~p~-nptG--~~~~~~~l~~l~~ 200 (343)
+...+ +++.. ...+ ...+.+++++..+
T Consensus 104 ~~~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 3v2g_A 104 VEALGGLDIL-VNSAGIWHSAPLEETTVADFDEVMA 138 (271)
T ss_dssp HHHHSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCcEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 33444 44442 2222 2346677776554
No 366
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=39.45 E-value=1.9e+02 Score=24.99 Aligned_cols=94 Identities=13% Similarity=0.019 Sum_probs=47.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc----------hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----------YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~----------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
..++||.+++..=..+.+.|.+.|..|++..-.-.. ........|.++..+..+-. |.+.+++.+
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~ 120 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVR-----DEQQISAAV 120 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCC-----CHHHHHHHH
Confidence 344555444444445566677888877765433221 22233445667777765432 456665554
Q ss_pred cC------CceEEEEeCC-CCCcc--cccCHHHHHHHHH
Q 019298 171 DQ------NTVALVIINP-GNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 171 ~~------~~~~i~~~~p-~nptG--~~~~~~~l~~l~~ 200 (343)
.. +...+ +++. ....+ ...+.++++++.+
T Consensus 121 ~~~~~~~g~iDil-VnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 121 EKAIKKFGGIDIL-VNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHSCCCEE-EECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 32 34444 4444 22222 2355666665543
No 367
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=39.11 E-value=1.7e+02 Score=24.36 Aligned_cols=96 Identities=14% Similarity=0.086 Sum_probs=49.2
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--- 172 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--- 172 (343)
...+++|.|++..=..+.+.|.+.|..|++..-.-.. ........|.++..+..+-. |.+.+++.+..
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLS-----DEQHCKDIVQETVR 121 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTT-----SHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 3455565555554455566677888887765433321 12223344666666655432 45555554432
Q ss_pred ---CceEEEEeCCC--CCcc--cccCHHHHHHHHHH
Q 019298 173 ---NTVALVIINPG--NPCG--NVYSYQHLQKLAET 201 (343)
Q Consensus 173 ---~~~~i~~~~p~--nptG--~~~~~~~l~~l~~~ 201 (343)
+...+ +++.. .+.+ ..++.++++++.+.
T Consensus 122 ~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~~v 156 (291)
T 3ijr_A 122 QLGSLNIL-VNNVAQQYPQQGLEYITAEQLEKTFRI 156 (291)
T ss_dssp HHSSCCEE-EECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HcCCCCEE-EECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 33444 44432 2222 12466777776654
No 368
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=38.84 E-value=1.6e+02 Score=24.54 Aligned_cols=94 Identities=11% Similarity=0.145 Sum_probs=44.3
Q ss_pred cEEEecChHHHHHHHHHHhcCCCC---eEEEeCCCCcchHHHHHhc-----CceeEEeecCCCCCCCCCHHHHHhhhcC-
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGA---NILLPRPGFPIYELSAAFR-----HIEVRHFDLLPDKGWEVDLDDIESLADQ- 172 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd---~vl~~~p~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~d~~~l~~~~~~- 172 (343)
.+++|.|++..=..+.+.|.+.|. .|++..-.-.......... +.++..+..+-. |.+.+++.+..
T Consensus 35 ~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~ 109 (287)
T 3rku_A 35 TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT-----QAEKIKPFIENL 109 (287)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT-----CGGGHHHHHHTS
T ss_pred EEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC-----CHHHHHHHHHHH
Confidence 445554444433444555666554 6666544433333332221 556666665432 44555554432
Q ss_pred ----CceEEEEeCCC-C-Cccc--ccCHHHHHHHHH
Q 019298 173 ----NTVALVIINPG-N-PCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 ----~~~~i~~~~p~-n-ptG~--~~~~~~l~~l~~ 200 (343)
...-+++++.. . +.+. .++.+++++..+
T Consensus 110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~ 145 (287)
T 3rku_A 110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFD 145 (287)
T ss_dssp CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHH
Confidence 12234445443 2 1221 346677766544
No 369
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=38.83 E-value=25 Score=31.93 Aligned_cols=28 Identities=21% Similarity=0.310 Sum_probs=24.7
Q ss_pred CCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 184 NPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
++.|..++++++++|++.|+++++-||-
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 4667799999999999999999988774
No 370
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=38.37 E-value=66 Score=27.45 Aligned_cols=80 Identities=13% Similarity=0.039 Sum_probs=47.0
Q ss_pred CCCeEEEeCCCCcchHHHHHhcCceeEEee--cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCC---------cccccC
Q 019298 123 PGANILLPRPGFPIYELSAAFRHIEVRHFD--LLPDKGWEVDLDDIESLADQNTVALVIINPGNP---------CGNVYS 191 (343)
Q Consensus 123 ~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~np---------tG~~~~ 191 (343)
++++|++..-.+-.+ ...+..|.++..++ ..-.....+.++.+++.....|.+.++.+|-.| .|.+
T Consensus 137 ~~~~iif~pD~~Lg~-~l~~~~~k~~i~~~~~g~C~vh~~~t~e~i~~~~~~~P~a~v~~HPEc~~~v~~~aD~vgST-- 213 (300)
T 1wzu_A 137 DSDVVIFGPDKNLAH-YVAKMTGKKIIPVPSKGHCYVHQKFTLDDVERAKKLHPNAKLMIHPECIPEVQEKADIIAST-- 213 (300)
T ss_dssp SCSEEEEESCHHHHH-HHHHHHCCEEEEC-----------CCHHHHHHHHHHCTTCEEEECTTSCHHHHHTCSEECCH--
T ss_pred CCCeEEEECChhHHH-HHHHHcCCeEEECCCCCcCCCcccCCHHHHHHHHHHCCCCEEEECCCCCHHHHhhccccCCH--
Confidence 567776655455433 33344587777665 211123357899999988888999999999665 3332
Q ss_pred HHHHHHHHHHHhhcCcEE
Q 019298 192 YQHLQKLAETANKLKTLV 209 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~ 209 (343)
..|++.+++.+-++
T Consensus 214 ----~~ii~~~~~~~~~i 227 (300)
T 1wzu_A 214 ----GGMIKRACEWDEWV 227 (300)
T ss_dssp ----HHHHHHGGGCSEEE
T ss_pred ----HHHHHHHHhCCCEE
Confidence 55666676665333
No 371
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=38.07 E-value=56 Score=28.81 Aligned_cols=71 Identities=14% Similarity=0.171 Sum_probs=43.2
Q ss_pred HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCc----eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT----VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 138 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~----~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
.+....+++++....+..+.+|.+..+.+-+... .+ .... .+ ..+.+-.++++++++|++.|+++++-||-
T Consensus 39 id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~-~~~~~~~g~~-~~-~~~~~g~YT~~di~eiv~YA~~rgI~VIP 113 (367)
T 1yht_A 39 IDTISLSGGNFLHLHFSDHENYAIESHLLNQRAE-NAVQGKDGIY-IN-PYTGKPFLSYRQLDDIKAYAKAKGIELIP 113 (367)
T ss_dssp HHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGG-GSEECTTSCE-EC-TTTCCEEBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHcCCcEEEEEEEcCCCceeeecchhhhhh-hhccccCCCc-CC-CCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 3455566788888877766677776543211110 00 0000 11 12234579999999999999999988774
No 372
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=37.97 E-value=21 Score=32.43 Aligned_cols=29 Identities=7% Similarity=0.155 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCcccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVF 220 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~ 220 (343)
.++++++++.|+++|+-||.|-++-+...
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 92 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDTLINHMAA 92 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeeccccC
Confidence 49999999999999999999999987543
No 373
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=37.64 E-value=1.6e+02 Score=23.95 Aligned_cols=97 Identities=12% Similarity=-0.009 Sum_probs=45.9
Q ss_pred CCCcEEEecCh--HHHHHHHHHHhcCCCCeEEEeCCCCcch-H----HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 99 TPNDVFVTSGC--TQAIDVAMALLSRPGANILLPRPGFPIY-E----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 99 ~~~~i~~~~g~--~~al~~~~~~l~~~gd~vl~~~p~~~~~-~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
....+++|.|+ ...=..+.+.|.+.|..|++..-.-... . ......+.++..+..+- -|.+.+++.++
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~ 93 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQV-----DSYESCEKLVK 93 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCC-----CCHHHHHHHHH
Confidence 33445555444 2333345566777888887664333222 1 12223366666665543 24555555443
Q ss_pred C------CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 019298 172 Q------NTVALVIINPGNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 172 ~------~~~~i~~~~p~nptG--~~~~~~~l~~l~~ 200 (343)
. +...++.+-...+.+ ...+.+++++..+
T Consensus 94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 130 (267)
T 3gdg_A 94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQ 130 (267)
T ss_dssp HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 2 334444332222222 1235666665543
No 374
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=37.40 E-value=75 Score=25.69 Aligned_cols=93 Identities=9% Similarity=-0.012 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcch---HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc
Q 019298 110 TQAIDVAMALLSRPGANILLPRPGFPIY---ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt 186 (343)
++++..+ ..+...|.+|++..|.-..- ...+...|.....+++.. .+++.+.+..+...|++--.+.
T Consensus 43 T~Llr~~-~r~~~~g~kvli~kp~~D~R~~~~~I~Sr~G~~~~a~~v~~-------~~di~~~i~~~~dvV~IDEaQF-- 112 (219)
T 3e2i_A 43 EELIRRL-RRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK-------ASEIMTHDLTNVDVIGIDEVQF-- 112 (219)
T ss_dssp HHHHHHH-HHHHHTTCCEEEEEEC-----------CBTTBCCEEEEESS-------GGGGGGSCCTTCSEEEECCGGG--
T ss_pred HHHHHHH-HHHHHcCCceEEEEeccCCcchhhhHHHhcCCceeeEEeCC-------HHHHHHHHhcCCCEEEEechhc--
Confidence 3455554 44445677788887765432 234444566555555432 2333333344556666655444
Q ss_pred ccccCHHHHHHHHHHHhhcCcEEEEccCCC
Q 019298 187 GNVYSYQHLQKLAETANKLKTLVIADEVYG 216 (343)
Q Consensus 187 G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~ 216 (343)
++.+.++.+.+++ ..|+.||+=.-=.
T Consensus 113 ---f~~~~v~~l~~la-~~gi~Vi~~GLd~ 138 (219)
T 3e2i_A 113 ---FDDEIVSIVEKLS-ADGHRVIVAGLDM 138 (219)
T ss_dssp ---SCTHHHHHHHHHH-HTTCEEEEEEESB
T ss_pred ---CCHHHHHHHHHHH-HCCCEEEEeeccc
Confidence 5556677777777 5799998754433
No 375
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=37.39 E-value=1.8e+02 Score=24.16 Aligned_cols=95 Identities=16% Similarity=0.121 Sum_probs=45.0
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh--------cCceeEEeecCCCCCCCCCHHHHHhhhcC
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF--------RHIEVRHFDLLPDKGWEVDLDDIESLADQ 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--------~g~~~~~~~~~~~~~~~~d~~~l~~~~~~ 172 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-......... .+.++..+..+- -|.+.+++.+..
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~ 93 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI-----RNEEEVNNLVKS 93 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCC-----CCHHHHHHHHHH
Confidence 3455555544444455666777887777654332222222211 244555555432 245666655542
Q ss_pred ------CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 019298 173 ------NTVALVIINPGNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 ------~~~~i~~~~p~nptG--~~~~~~~l~~l~~ 200 (343)
+...++.+......+ ...+.+++++..+
T Consensus 94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 129 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLE 129 (303)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 344544333222222 2245556654443
No 376
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=37.20 E-value=1.7e+02 Score=23.93 Aligned_cols=93 Identities=12% Similarity=0.038 Sum_probs=45.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhc------
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLAD------ 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~------ 171 (343)
..+++|.++...=..+.+.|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.+.
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDL-----LSRTERDKLMQTVAHVF 96 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 34555555544445566667778888776543322222222 22355555555432 24555555442
Q ss_pred -CCceEEEEeCCC-CCcc--cccCHHHHHHHH
Q 019298 172 -QNTVALVIINPG-NPCG--NVYSYQHLQKLA 199 (343)
Q Consensus 172 -~~~~~i~~~~p~-nptG--~~~~~~~l~~l~ 199 (343)
.+...+ +++.. ...+ ...+.++++++.
T Consensus 97 ~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~ 127 (273)
T 1ae1_A 97 DGKLNIL-VNNAGVVIHKEAKDFTEKDYNIIM 127 (273)
T ss_dssp TSCCCEE-EECCCCCCCCCTTTCCHHHHHHHH
T ss_pred CCCCcEE-EECCCCCCCCChhhCCHHHHHHHH
Confidence 233444 44442 2222 224666766543
No 377
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=36.92 E-value=1.6e+02 Score=23.44 Aligned_cols=64 Identities=11% Similarity=0.040 Sum_probs=30.2
Q ss_pred EEEecChHHHHHHHHHHhcCCCC-------eEEEeCCCCcchHHHHH---hcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 103 VFVTSGCTQAIDVAMALLSRPGA-------NILLPRPGFPIYELSAA---FRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~~~gd-------~vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
+++|.|+...=..+.+.|.+.|. .|++..-.-........ ..+.++..+..+- -|.+.+++.+.
T Consensus 5 vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 78 (244)
T 2bd0_A 5 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADI-----SDMADVRRLTT 78 (244)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCT-----TSHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecC-----CCHHHHHHHHH
Confidence 44554443333445555666676 66655433222222222 1255566555432 24566665543
No 378
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=36.40 E-value=1.7e+02 Score=23.62 Aligned_cols=93 Identities=22% Similarity=0.148 Sum_probs=43.7
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCc-chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 174 (343)
.+++|.++...=..+.+.|.+.|..|++..-.-. .........+.++..+..+- -|.+.+++.+.. +.
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 80 (255)
T 2q2v_A 6 TALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADL-----SDVAQIEALFALAEREFGGV 80 (255)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCT-----TSHHHHHHHHHHHHHHHSSC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4555554444445556667778888776543322 11112222355555554432 245666655542 34
Q ss_pred eEEEEeCCCCCcc--cccCHHHHHHHH
Q 019298 175 VALVIINPGNPCG--NVYSYQHLQKLA 199 (343)
Q Consensus 175 ~~i~~~~p~nptG--~~~~~~~l~~l~ 199 (343)
..++.+....+.+ ...+.+++++..
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~ 107 (255)
T 2q2v_A 81 DILVNNAGIQHVAPVEQFPLESWDKII 107 (255)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 4444333222222 224566665433
No 379
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=36.21 E-value=1.8e+02 Score=23.77 Aligned_cols=95 Identities=12% Similarity=-0.077 Sum_probs=45.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh---c--CceeEEeecCCCCCCCCCHHHHHhhhcC--C
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---R--HIEVRHFDLLPDKGWEVDLDDIESLADQ--N 173 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~--g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~ 173 (343)
..+++|.|++..=..+.+.|.+.|..|++..-.-......... . +..+..+..+. -|.+.+++.+.. +
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~g~ 85 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADL-----GTEQGCQDVIEKYPK 85 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT-----TSHHHHHHHHHHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC-----CCHHHHHHHHHhcCC
Confidence 3455555544444455666778888887765443322222221 1 34455554432 245666665543 3
Q ss_pred ceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 019298 174 TVALVIINPGNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 174 ~~~i~~~~p~nptG--~~~~~~~l~~l~~ 200 (343)
...++.+......+ ...+.+++++..+
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 114 (267)
T 3t4x_A 86 VDILINNLGIFEPVEYFDIPDEDWFKLFE 114 (267)
T ss_dssp CSEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 44444332222212 2345677655433
No 380
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=36.11 E-value=33 Score=30.99 Aligned_cols=28 Identities=14% Similarity=0.101 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++.|+++|+-||+|-++-+..
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 4999999999999999999999987644
No 381
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=36.08 E-value=1.8e+02 Score=23.73 Aligned_cols=42 Identities=12% Similarity=0.123 Sum_probs=19.4
Q ss_pred CHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCc
Q 019298 162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207 (343)
Q Consensus 162 d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 207 (343)
|.+.++++++ +...++.+....+.. .......+++.|++.++
T Consensus 55 d~~~~~~~~~-~~d~vi~~a~~~~~~---~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 55 DEAALTSALQ-GVEKLLLISSSEVGQ---RAPQHRNVINAAKAAGV 96 (286)
T ss_dssp CHHHHHHHTT-TCSEEEECC-----------CHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHh-CCCEEEEeCCCCchH---HHHHHHHHHHHHHHcCC
Confidence 5666776665 345555443322211 11345666777766653
No 382
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=35.87 E-value=1.5e+02 Score=23.03 Aligned_cols=92 Identities=12% Similarity=0.010 Sum_probs=45.4
Q ss_pred EEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298 103 VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p 182 (343)
|++|.++...=..+++.|.+.|..|.+..-.-...... . .+..++..++.. .+. +.+. +...++.+..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~-~~~~~~~~D~~d-------~~~--~~~~-~~d~vi~~ag 70 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-H-KDINILQKDIFD-------LTL--SDLS-DQNVVVDAYG 70 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-C-SSSEEEECCGGG-------CCH--HHHT-TCSEEEECCC
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-c-CCCeEEeccccC-------hhh--hhhc-CCCEEEECCc
Confidence 55555433333445556667787776554332221111 1 345555444322 111 2332 4566665544
Q ss_pred CCCcccccCHHHHHHHHHHHhhcC
Q 019298 183 GNPCGNVYSYQHLQKLAETANKLK 206 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~ 206 (343)
..+.......+-.+.+++.|++.+
T Consensus 71 ~~~~~~~~~~~~~~~l~~a~~~~~ 94 (221)
T 3ew7_A 71 ISPDEAEKHVTSLDHLISVLNGTV 94 (221)
T ss_dssp SSTTTTTSHHHHHHHHHHHHCSCC
T ss_pred CCccccchHHHHHHHHHHHHHhcC
Confidence 333223334466788888888773
No 383
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=35.62 E-value=1.8e+02 Score=23.73 Aligned_cols=98 Identities=8% Similarity=-0.023 Sum_probs=48.7
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-
Q 019298 98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ- 172 (343)
Q Consensus 98 ~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~- 172 (343)
+....+++|.|++..=..+.+.|.+.|..|++..-.-.. ........+.++..+..+. -|.+.+++.++.
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~ 101 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDA-----ASESDFIEAIQTI 101 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHH
Confidence 344455565555544455666777888877765432221 1222334466666666543 245555554431
Q ss_pred -----CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 019298 173 -----NTVALVIINPGNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 -----~~~~i~~~~p~nptG--~~~~~~~l~~l~~ 200 (343)
+...++.+......+ ...+.+++++..+
T Consensus 102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 344444333322222 2356666665543
No 384
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=34.97 E-value=1.5e+02 Score=25.52 Aligned_cols=37 Identities=16% Similarity=0.100 Sum_probs=31.7
Q ss_pred CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.||.+-..+.+.+.++++.|+++|+-+++|--|++.+
T Consensus 50 v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~w 86 (334)
T 1fob_A 50 VNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDTW 86 (334)
T ss_dssp SCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred ECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCCC
Confidence 6777778888999999999999999999998776543
No 385
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=34.92 E-value=26 Score=31.83 Aligned_cols=28 Identities=21% Similarity=0.284 Sum_probs=24.5
Q ss_pred CCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 184 NPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
+|.|..+|++++++|++.|+++++-||-
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 3567789999999999999999988774
No 386
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=34.86 E-value=1.9e+02 Score=23.77 Aligned_cols=33 Identities=18% Similarity=0.172 Sum_probs=19.8
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCC
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPG 133 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~ 133 (343)
..+++|.++...=..+.+.|.+.|..|++..-.
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~ 62 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARD 62 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 345555554444445556677788888776543
No 387
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=34.68 E-value=37 Score=31.56 Aligned_cols=29 Identities=21% Similarity=0.138 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCcccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVF 220 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~ 220 (343)
.++++++++-|+++|+-||.|-++-+...
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V~NHt~~ 120 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVVPNHMNR 120 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecCcCC
Confidence 49999999999999999999999987543
No 388
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=34.64 E-value=49 Score=29.95 Aligned_cols=95 Identities=12% Similarity=0.058 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcc-hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCccc
Q 019298 110 TQAIDVAMALLSRPGANILLPRPGFPI-YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGN 188 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~ 188 (343)
.+++....+.+ ++-+.+++.+|.... +......... ..+++--++.+.-+...+++.+..+..-++...++.-.|.
T Consensus 276 ~eai~~~~~~l-~~y~i~~iEdPl~~dD~~g~~~l~~~--~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv~qiGGi 352 (436)
T 2al1_A 276 PQLADLYHSLM-KRYPIVSIEDPFAEDDWEAWSHFFKT--AGIQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTL 352 (436)
T ss_dssp HHHHHHHHHHH-HHSCEEEEECCSCTTCHHHHHHHHTT--CCSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCH
T ss_pred HHHHHHHHHHH-HhCCcEEEECCCCCcCHHHHHHHHhc--CCCeEEECCcccCCHHHHHHHHHhCCCCEEEechhhcCCH
Confidence 44554444333 344688999997643 2222222221 1223322233334789999988876655565555554443
Q ss_pred ccCHHHHHHHHHHHhhcCcEEEE
Q 019298 189 VYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 189 ~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
.+..+++++|+.+|+.+++
T Consensus 353 ----tea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 353 ----SESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp ----HHHHHHHHHHHHTTCEEEE
T ss_pred ----HHHHHHHHHHHHcCCeEEE
Confidence 4788999999999987654
No 389
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=34.57 E-value=1.4e+02 Score=26.23 Aligned_cols=19 Identities=37% Similarity=0.321 Sum_probs=13.2
Q ss_pred HHHHHHHHHHhhcCcEEEE
Q 019298 193 QHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~ 211 (343)
+.+++|..+++++++.+|+
T Consensus 188 ~~lr~L~~~a~~~~~~VI~ 206 (366)
T 1xp8_A 188 QALRKLTAILSKTGTAAIF 206 (366)
T ss_dssp HHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 3456677778888876655
No 390
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=34.54 E-value=1.9e+02 Score=23.79 Aligned_cols=53 Identities=11% Similarity=-0.045 Sum_probs=26.4
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCC-cchHHHHH----hcCceeEEeecC
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGF-PIYELSAA----FRHIEVRHFDLL 154 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~-~~~~~~~~----~~g~~~~~~~~~ 154 (343)
.+++|.++...=..+.+.|.+.|..|++..-.- ........ ..+.++..+..+
T Consensus 25 ~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~D 82 (288)
T 2x9g_A 25 AAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQAD 82 (288)
T ss_dssp EEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEee
Confidence 444554444444455566777787777654333 22222222 235556655554
No 391
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=34.54 E-value=2e+02 Score=23.81 Aligned_cols=93 Identities=16% Similarity=0.047 Sum_probs=46.4
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh---cCceeEEeecCCCCCCCCCHHHHHhhhcC------
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---RHIEVRHFDLLPDKGWEVDLDDIESLADQ------ 172 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------ 172 (343)
.+++|.|++..=..+.+.|.+.|..|++..-.-......... .+.++..+..+- -|.+.+++.+..
T Consensus 10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 10 IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDV-----GDEALHEALVELAVRRFG 84 (280)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCT-----TCHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHcC
Confidence 344554444444455666778898888766544333333322 255566554432 245555554432
Q ss_pred CceEEEEeCCC-C-Cccc--ccCHHHHHHHHH
Q 019298 173 NTVALVIINPG-N-PCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 ~~~~i~~~~p~-n-ptG~--~~~~~~l~~l~~ 200 (343)
+... ++++.. . +.+. ..+.+++++..+
T Consensus 85 ~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 3tox_A 85 GLDT-AFNNAGALGAMGEISSLSVEGWRETLD 115 (280)
T ss_dssp CCCE-EEECCCCCCSCSCGGGCCHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 3444 444442 1 2222 356677766544
No 392
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=34.52 E-value=35 Score=30.43 Aligned_cols=28 Identities=25% Similarity=0.194 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++.|+++|+-||.|-++-+..
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 4999999999999999999999988754
No 393
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=34.33 E-value=1.7e+02 Score=23.18 Aligned_cols=66 Identities=20% Similarity=0.141 Sum_probs=33.6
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEe-CCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLP-RPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~-~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.|+...=..+.+.|.+.|..|++. ...-...... ....+.++..+..+- -|.+.+++.++
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 75 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDV-----KNPEDVENMVK 75 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCT-----TSHHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHH
Confidence 345555544444445556677788777765 4333222222 222355566555432 24566665543
No 394
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=34.32 E-value=1.8e+02 Score=23.34 Aligned_cols=93 Identities=14% Similarity=-0.008 Sum_probs=44.2
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cce
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTV 175 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~ 175 (343)
.+++|.|+...=..+.+.|.+.|..|++..-.-.......... .+...+..+- -|.+.+++.+.. +..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id 77 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER-PNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC-TTEEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-ccCCeEEeeC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 3555555554445556667788888877654433223232222 2233343322 245556555432 344
Q ss_pred EEEEeCCCCCccc--ccCHHHHHHHHH
Q 019298 176 ALVIINPGNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 176 ~i~~~~p~nptG~--~~~~~~l~~l~~ 200 (343)
.++.+....+.+. ..+.+++++..+
T Consensus 78 ~lv~nAg~~~~~~~~~~~~~~~~~~~~ 104 (247)
T 3dii_A 78 VLVNNACRGSKGILSSLLYEEFDYILS 104 (247)
T ss_dssp EEEECCC-CCCCGGGTCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4443332222222 345677665544
No 395
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=34.25 E-value=28 Score=31.83 Aligned_cols=28 Identities=18% Similarity=0.177 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++.|+++|+-||+|-++-+..
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 107 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVMNHKM 107 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 4999999999999999999999998754
No 396
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=34.15 E-value=1.5e+02 Score=24.17 Aligned_cols=66 Identities=12% Similarity=0.038 Sum_probs=31.9
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-..... .....+.++..+..+- -|.+.+++.+.
T Consensus 35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~ 103 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNI-----SDPKSVEETIS 103 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeec-----CCHHHHHHHHH
Confidence 345555444333344555566678777665433222222 2222355555555432 24566665543
No 397
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=33.91 E-value=57 Score=27.33 Aligned_cols=78 Identities=10% Similarity=0.141 Sum_probs=45.2
Q ss_pred EEecChHHHHHHHHHHhcCCCCeEEEeCCCC--cchHHHHHhcCceeEEeecCCCCCCCCC-HHHHHhhhc--CCceEEE
Q 019298 104 FVTSGCTQAIDVAMALLSRPGANILLPRPGF--PIYELSAAFRHIEVRHFDLLPDKGWEVD-LDDIESLAD--QNTVALV 178 (343)
Q Consensus 104 ~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~~~--~~~~~i~ 178 (343)
+...+.++++...+.....+|.+|+++...- ......++..|..+..+++..... ..+ .+.+.+.+. .....|+
T Consensus 137 ~p~~~~ae~L~~~l~~~~~~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~~~Y~~~~-~~~~~~~~~~~l~~~~~~d~v~ 215 (286)
T 1jr2_A 137 GETCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVA-HPGIQGNLNSYYSQQGVPASIT 215 (286)
T ss_dssp CCSCSSHHHHHHHHHTSCCCSSCEEEEESCGGGCCHHHHHHTTTCCEEEEECEEEEE-CTTHHHHHHHHHHHHCSCSEEE
T ss_pred CCCccCHHHHHHHHHhcccCCCeEEEECChhhHHHHHHHHHHCCCeeEEEEEEEEee-CCCcHHHHHHHHHhCCCCCEEE
Confidence 3345566666665544334678899886653 446667788899888777642111 112 234555453 2456777
Q ss_pred EeCC
Q 019298 179 IINP 182 (343)
Q Consensus 179 ~~~p 182 (343)
+.+|
T Consensus 216 ftS~ 219 (286)
T 1jr2_A 216 FFSP 219 (286)
T ss_dssp ESSH
T ss_pred EECh
Confidence 6554
No 398
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=33.79 E-value=1.9e+02 Score=23.47 Aligned_cols=32 Identities=19% Similarity=0.297 Sum_probs=19.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCC
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p 132 (343)
..+++|.|+...=..+.+.|.+.|..|++..-
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 48 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADI 48 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 34566655544445556667778888776643
No 399
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=33.69 E-value=28 Score=35.48 Aligned_cols=28 Identities=25% Similarity=0.301 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++.|+++|+-||.|-+|.+..
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~ 588 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTA 588 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccc
Confidence 5999999999999999999999997653
No 400
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=33.67 E-value=1.9e+02 Score=23.43 Aligned_cols=93 Identities=13% Similarity=0.047 Sum_probs=46.1
Q ss_pred cEEEecChHHHH-HHHHHHhcCCCCeEEEe-CCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 102 DVFVTSGCTQAI-DVAMALLSRPGANILLP-RPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 102 ~i~~~~g~~~al-~~~~~~l~~~gd~vl~~-~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
.+++.+|++.+| ..+.+.|.+.|..|++. ...-...... ....+.++..+..+- -|.+.+++.++.
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANV-----GQPAKIKEMFQQIDET 79 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 444444444444 45556677888887764 4333222222 223355666665543 245665554432
Q ss_pred --CceEEEEeCC-CCCcc--cccCHHHHHHHHH
Q 019298 173 --NTVALVIINP-GNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 --~~~~i~~~~p-~nptG--~~~~~~~l~~l~~ 200 (343)
+...++ ++. ....+ ...+.+++++..+
T Consensus 80 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3oid_A 80 FGRLDVFV-NNAASGVLRPVMELEETHWDWTMN 111 (258)
T ss_dssp HSCCCEEE-ECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 334444 444 22222 2356677666544
No 401
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=33.56 E-value=2.2e+02 Score=24.15 Aligned_cols=93 Identities=13% Similarity=0.126 Sum_probs=44.9
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCC--Cc---c---hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPG--FP---I---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ- 172 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~--~~---~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~- 172 (343)
.+++|.+++..=..+.+.|.+.|.+|+...-. -. . ........+.++..+..+-. |.+.+++.+..
T Consensus 7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvt-----d~~~v~~~~~~~ 81 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQ-----SQVSVDRAIDQI 81 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTT-----CHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecC-----CHHHHHHHHHHH
Confidence 34555544444445566677889888754211 11 1 11222334556666655432 45566555432
Q ss_pred -----CceEEEEeCC-CCCccc--ccCHHHHHHHHH
Q 019298 173 -----NTVALVIINP-GNPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 -----~~~~i~~~~p-~nptG~--~~~~~~l~~l~~ 200 (343)
+... ++++. ....|. .++.++++++.+
T Consensus 82 ~~~~g~iD~-lVnnAG~~~~~~~~~~~~~~~~~~~~ 116 (324)
T 3u9l_A 82 IGEDGRIDV-LIHNAGHMVFGPAEAFTPEQFAELYD 116 (324)
T ss_dssp HHHHSCCSE-EEECCCCCBCSCGGGSCHHHHHHHHH
T ss_pred HHHcCCCCE-EEECCCcCCCCChhhCCHHHHHHHHH
Confidence 3444 44444 232222 245666654433
No 402
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=33.53 E-value=30 Score=31.74 Aligned_cols=28 Identities=21% Similarity=0.184 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++.|+++|+-||+|-++-+..
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 105 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVVLNHKA 105 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 4999999999999999999999988754
No 403
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=33.42 E-value=2e+02 Score=23.47 Aligned_cols=30 Identities=13% Similarity=0.077 Sum_probs=18.9
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~ 130 (343)
..+++|.++...=..+.+.|.+.|..|++.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 38 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEGSKVIDL 38 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 345666555554455566677788777665
No 404
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=33.25 E-value=35 Score=31.29 Aligned_cols=28 Identities=29% Similarity=0.311 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+++++|++.|+++|+-||.|-++-+..
T Consensus 81 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~s 108 (488)
T 1wza_A 81 LEDFHKLVEAAHQRGIKVIIDLPINHTS 108 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 4999999999999999999999987643
No 405
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=32.91 E-value=1.7e+02 Score=22.76 Aligned_cols=96 Identities=7% Similarity=-0.026 Sum_probs=49.7
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeC
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN 181 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 181 (343)
.|++|.++...=..+++.|.+.|..|.+..-.-.... .....+..+..+ -.|.+.++++++ +...|+.+.
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D-----l~d~~~~~~~~~-~~d~vi~~a 75 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK----IENEHLKVKKAD-----VSSLDEVCEVCK-GADAVISAF 75 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC----CCCTTEEEECCC-----TTCHHHHHHHHT-TCSEEEECC
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccch----hccCceEEEEec-----CCCHHHHHHHhc-CCCEEEEeC
Confidence 5666655444444556667778877776654322111 111233333322 136788888776 456666543
Q ss_pred CC---CCcccccCHHHHHHHHHHHhhcCc
Q 019298 182 PG---NPCGNVYSYQHLQKLAETANKLKT 207 (343)
Q Consensus 182 p~---nptG~~~~~~~l~~l~~~~~~~~~ 207 (343)
.. ++.-......-...+++.|++.++
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 104 (227)
T 3dhn_A 76 NPGWNNPDIYDETIKVYLTIIDGVKKAGV 104 (227)
T ss_dssp CC------CCSHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHhCC
Confidence 22 111111123456778888888764
No 406
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=32.87 E-value=1.9e+02 Score=23.28 Aligned_cols=93 Identities=13% Similarity=-0.071 Sum_probs=42.4
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhc------
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLAD------ 171 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~------ 171 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-....... ...+.++..+..+. -|.+.+++.+.
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDA-----SLRPEREKLMQTVSSMF 89 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 34555544444335556667778877776543322222221 22344555554432 24555555443
Q ss_pred -CCceEEEEeCCCCCcc--cccCHHHHHHH
Q 019298 172 -QNTVALVIINPGNPCG--NVYSYQHLQKL 198 (343)
Q Consensus 172 -~~~~~i~~~~p~nptG--~~~~~~~l~~l 198 (343)
.+...++.+....+.+ ...+.+++++.
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~ 119 (266)
T 1xq1_A 90 GGKLDILINNLGAIRSKPTLDYTAEDFSFH 119 (266)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHH
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHH
Confidence 3455555443322222 12355555443
No 407
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=32.83 E-value=31 Score=31.63 Aligned_cols=28 Identities=21% Similarity=0.127 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+++++|++.|+++|+-||+|-++-+..
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 109 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVMNHKG 109 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccC
Confidence 4999999999999999999999988753
No 408
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=32.79 E-value=39 Score=30.48 Aligned_cols=28 Identities=36% Similarity=0.377 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++-|+++|+-||+|-++-+..
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 4999999999999999999999987654
No 409
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=32.67 E-value=34 Score=31.24 Aligned_cols=28 Identities=32% Similarity=0.363 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++.|+++|+-||.|-++-+..
T Consensus 96 ~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 96 NEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4999999999999999999999987644
No 410
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=32.59 E-value=33 Score=31.82 Aligned_cols=27 Identities=19% Similarity=0.293 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCcc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHL 218 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~ 218 (343)
.+++++|++-|+++|+-||.|-++-+.
T Consensus 79 ~~dfk~Lv~~aH~~Gi~VilD~V~NHt 105 (549)
T 4aie_A 79 MADMDELISKAKEHHIKIVMDLVVNHT 105 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccCC
Confidence 499999999999999999999999764
No 411
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=32.42 E-value=40 Score=30.83 Aligned_cols=29 Identities=17% Similarity=0.321 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCcccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVF 220 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~ 220 (343)
.++++++++.|+++|+-||.|-++-+...
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 97 ADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 49999999999999999999999987543
No 412
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=32.38 E-value=1.8e+02 Score=23.84 Aligned_cols=65 Identities=14% Similarity=0.091 Sum_probs=31.8
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcC--ceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRH--IEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
.+++|.|+...=..+.+.|.+.|..|++..-.-........... .++..+..+- -|.+.+++.+.
T Consensus 23 ~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 89 (272)
T 2nwq_A 23 TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDV-----RDRAAMSAAVD 89 (272)
T ss_dssp EEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCT-----TCHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCC-----CCHHHHHHHHH
Confidence 44455444333344555677788887765443322233322221 2444444432 25666666554
No 413
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=32.28 E-value=34 Score=31.22 Aligned_cols=28 Identities=18% Similarity=0.260 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++.|+++|+-||+|-++.+..
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 4999999999999999999999988654
No 414
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=32.25 E-value=32 Score=31.88 Aligned_cols=28 Identities=21% Similarity=0.179 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++.|+++|+-||+|-++-+..
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 4999999999999999999999988754
No 415
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=32.21 E-value=2e+02 Score=23.27 Aligned_cols=94 Identities=15% Similarity=0.107 Sum_probs=45.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
..+++|.++...=..+.+.|.+.|..|++..-.-....... ...|.++..+..+- -|.+.+++.+..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDV-----TSEEAVIGTVDSVVRDF 82 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHHh
Confidence 34555555544445556667778887776543322222222 22255565555432 245555554431
Q ss_pred -CceEEEEeCCC-C-Ccc--cccCHHHHHHHHH
Q 019298 173 -NTVALVIINPG-N-PCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 -~~~~i~~~~p~-n-ptG--~~~~~~~l~~l~~ 200 (343)
+...++ ++.. . +.+ ...+.+++++..+
T Consensus 83 g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 83 GKIDFLF-NNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp SCCCEEE-ECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCCccccCCHHHHHHHHH
Confidence 344444 4432 2 222 1246666665443
No 416
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=32.12 E-value=64 Score=28.63 Aligned_cols=79 Identities=14% Similarity=0.000 Sum_probs=43.8
Q ss_pred HHHhhhcCCceEEEEe--CC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEc
Q 019298 165 DIESLADQNTVALVII--NP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG 241 (343)
Q Consensus 165 ~l~~~~~~~~~~i~~~--~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~ 241 (343)
-|+.+.+.+-+.|+.| .| .++.-.. +++++|+++|+++|+-+++|-.=..|..-+-.. +. -
T Consensus 46 Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~---~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~------~d-------l 109 (385)
T 1x7f_A 46 YISAAARHGFSRIFTCLLSVNRPKEEIV---AEFKEIINHAKDNNMEVILDVAPAVFDQLGISY------SD-------L 109 (385)
T ss_dssp HHHHHHTTTEEEEEEEECCC-----------HHHHHHHHHHHHTTCEEEEEECTTCC------C------CC-------T
T ss_pred HHHHHHHCCCCEEEccCCccCCChHHHH---HHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCH------HH-------H
Confidence 3444444455555533 34 2333333 889999999999999999997744432111111 11 1
Q ss_pred cCccccCCCCCcEEEEEE
Q 019298 242 SLSKRWIVPGWRLGWFVT 259 (343)
Q Consensus 242 S~sK~~~~~G~r~G~i~~ 259 (343)
++=|.+|+.|+|+=+-..
T Consensus 110 ~~f~~lGi~gLRLD~Gf~ 127 (385)
T 1x7f_A 110 SFFAELGADGIRLDVGFD 127 (385)
T ss_dssp HHHHHHTCSEEEESSCCS
T ss_pred HHHHHcCCCEEEEcCCCC
Confidence 344566888888866543
No 417
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=31.54 E-value=1.1e+02 Score=26.60 Aligned_cols=90 Identities=16% Similarity=0.163 Sum_probs=45.4
Q ss_pred CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHH-Hh----h--hcC-CceEEEEeCCCCCc------cc
Q 019298 123 PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI-ES----L--ADQ-NTVALVIINPGNPC------GN 188 (343)
Q Consensus 123 ~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l-~~----~--~~~-~~~~i~~~~p~npt------G~ 188 (343)
+|..|+..+.........++..|.+...+-+...+ +.+++ .+ . +++ .++++++-+-.... |.
T Consensus 57 ~g~~vlyId~E~s~~~~ra~~lGvd~d~llv~~~~----~~E~~~l~i~~~l~~i~~~~~~lvVIDSI~aL~~~~eieg~ 132 (333)
T 3io5_A 57 PDAVCLFYDSEFGITPAYLRSMGVDPERVIHTPVQ----SLEQLRIDMVNQLDAIERGEKVVVFIDSLGNLASKKETEDA 132 (333)
T ss_dssp TTCEEEEEESSCCCCHHHHHHTTCCGGGEEEEECS----BHHHHHHHHHHHHHTCCTTCCEEEEEECSTTCBCC------
T ss_pred CCceEEEEeccchhhHHHHHHhCCCHHHeEEEcCC----CHHHHHHHHHHHHHHhhccCceEEEEecccccccchhccCc
Confidence 36677766655544344567777654332222211 34443 22 1 333 56777776664432 11
Q ss_pred --------ccC----HHHHHHHHHHHhhcCcEEE-EccCCC
Q 019298 189 --------VYS----YQHLQKLAETANKLKTLVI-ADEVYG 216 (343)
Q Consensus 189 --------~~~----~~~l~~l~~~~~~~~~~~i-~D~ay~ 216 (343)
+.- ...+++|..+++++|+.+| +..++.
T Consensus 133 ~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~tNQV~k 173 (333)
T 3io5_A 133 LNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIAINHTYE 173 (333)
T ss_dssp --------CTHHHHHHHHHHHHHHHHHHTTCEEEEEEEC--
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEEECCeee
Confidence 110 1236667778999997654 555543
No 418
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=31.44 E-value=2e+02 Score=22.95 Aligned_cols=94 Identities=13% Similarity=0.042 Sum_probs=45.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCC-CcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC----
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPG-FPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~-~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 172 (343)
..+++|.|+...=..+.+.|.+.|..|++..-. -....... ...+.++..+..+- -|.+.+++.+..
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADL-----ATSEACQQLVDEFVAK 82 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 345555444444445556677788777665433 22222222 22355666665432 245666665542
Q ss_pred --CceEEEEeCCC-CCccc--ccCHHHHHHHH
Q 019298 173 --NTVALVIINPG-NPCGN--VYSYQHLQKLA 199 (343)
Q Consensus 173 --~~~~i~~~~p~-nptG~--~~~~~~l~~l~ 199 (343)
+...++.+... .+.+. ..+.+++++..
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVM 114 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHH
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHH
Confidence 44555543322 22221 24555555543
No 419
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=31.39 E-value=38 Score=30.36 Aligned_cols=28 Identities=25% Similarity=0.355 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++.|+++|+-||+|-++.+..
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (422)
T 1ua7_A 74 EQEFKEMCAAAEEYGIKVIVDAVINHTT 101 (422)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 4999999999999999999999998754
No 420
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=31.17 E-value=40 Score=30.31 Aligned_cols=28 Identities=21% Similarity=0.101 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+++++|++-|+++|+-||.|-++.+..
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 4999999999999999999999998754
No 421
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=31.08 E-value=2.2e+02 Score=23.34 Aligned_cols=94 Identities=14% Similarity=0.070 Sum_probs=46.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH---hcCc---eeEEeecCCCCCCCCCHHHHHhhhcC--
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA---FRHI---EVRHFDLLPDKGWEVDLDDIESLADQ-- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~-- 172 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-........ ..+. ++..+..+- -|.+.+++.++.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI-----TNEDETARAVDAVT 86 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCC-----CCHHHHHHHHHHHH
Confidence 445555555544455566677888888776543332222222 2232 555555432 245555554432
Q ss_pred ----CceEEEEeCCC--CCcc--cccCHHHHHHHHH
Q 019298 173 ----NTVALVIINPG--NPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 ----~~~~i~~~~p~--nptG--~~~~~~~l~~l~~ 200 (343)
+...++ ++.. .+.+ ...+.+++++..+
T Consensus 87 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 121 (281)
T 3svt_A 87 AWHGRLHGVV-HCAGGSENIGPITQVDSEAWRRTVD 121 (281)
T ss_dssp HHHSCCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCcCCCCCCcccCCHHHHHHHHH
Confidence 334444 4432 2222 2356666665443
No 422
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=31.04 E-value=3.1e+02 Score=25.27 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=50.6
Q ss_pred CCCCcEEEecChHHHHHHH-HHHhcCCCCe-EEEe-CCC----------------CcchHHHHHhcCceeEEeecCCCCC
Q 019298 98 LTPNDVFVTSGCTQAIDVA-MALLSRPGAN-ILLP-RPG----------------FPIYELSAAFRHIEVRHFDLLPDKG 158 (343)
Q Consensus 98 ~~~~~i~~~~g~~~al~~~-~~~l~~~gd~-vl~~-~p~----------------~~~~~~~~~~~g~~~~~~~~~~~~~ 158 (343)
+.++.+++.+|++.+|-.. .+.|.+.|.. |++. .-. -......+...|.++..+..+-
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv--- 324 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDL--- 324 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCT---
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCC---
Confidence 3456777777776666544 4445666654 5544 222 1112223344577887776643
Q ss_pred CCCCHHHHHhhhcC----CceEEEEeCCC-CCccc--ccCHHHHHHHHH
Q 019298 159 WEVDLDDIESLADQ----NTVALVIINPG-NPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 159 ~~~d~~~l~~~~~~----~~~~i~~~~p~-nptG~--~~~~~~l~~l~~ 200 (343)
-|.+++++.+.. .+.-+++++.. ...+. .++.+++++..+
T Consensus 325 --td~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 325 --TDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp --TSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHH
Confidence 256777766543 22334444442 22222 356666666544
No 423
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=30.99 E-value=2.6e+02 Score=24.25 Aligned_cols=88 Identities=14% Similarity=0.114 Sum_probs=49.3
Q ss_pred cEEEecCh---HHHHHHHHHHhcCCCCeEEEeCCCCcc-hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCce
Q 019298 102 DVFVTSGC---TQAIDVAMALLSRPGANILLPRPGFPI-YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTV 175 (343)
Q Consensus 102 ~i~~~~g~---~~al~~~~~~l~~~gd~vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~ 175 (343)
.|++..|+ .+++..+-.+-.-.-|.|++..|.|.. ...-. -.+.++...+ .+.+
T Consensus 94 pViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~--------------------l~~~f~~IA~aa~~lP 153 (344)
T 2hmc_A 94 PVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAA--------------------QKAHFKAILSAAPEIP 153 (344)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHH--------------------HHHHHHHHHHHSTTSC
T ss_pred cEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHH--------------------HHHHHHHHHhhCCCCc
Confidence 46666553 556655433322123888888888854 21100 0122222222 1456
Q ss_pred EEEEeCCCCCcccccCHHHHHHH-HHHHhhcCcEEEEccC
Q 019298 176 ALVIINPGNPCGNVYSYQHLQKL-AETANKLKTLVIADEV 214 (343)
Q Consensus 176 ~i~~~~p~nptG~~~~~~~l~~l-~~~~~~~~~~~i~D~a 214 (343)
+++++.| .||..++.+.+.+| ++ --++.=|=|..
T Consensus 154 iilYn~P--~tg~~l~~e~~~~L~a~---~pnIvGiKdss 188 (344)
T 2hmc_A 154 AVIYNSP--YYGFATRADLFFALRAE---HKNLVGFKEFG 188 (344)
T ss_dssp EEEEEBG--GGTBCCCHHHHHHHHHH---CTTEEEEEECS
T ss_pred EEEEecC--ccCCCcCHHHHHHHHhc---CCCEEEEEcCC
Confidence 7788888 89999999888888 53 23555555544
No 424
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=30.88 E-value=2.3e+02 Score=23.51 Aligned_cols=95 Identities=14% Similarity=0.010 Sum_probs=49.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCc--c---hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP--I---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--- 172 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~--~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--- 172 (343)
..+++|.|+...=..+.+.|.+.|..|++..-.-. . ........|.++..+..+- -|.+.+++.+..
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDL-----SDESFARSLVHKARE 124 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 44555555555445556667788988877544321 1 1222334466666665432 245555554431
Q ss_pred ---CceEEEEeCCC--CCcc--cccCHHHHHHHHHH
Q 019298 173 ---NTVALVIINPG--NPCG--NVYSYQHLQKLAET 201 (343)
Q Consensus 173 ---~~~~i~~~~p~--nptG--~~~~~~~l~~l~~~ 201 (343)
+...++ ++.. .+.+ ..++.+++++..+.
T Consensus 125 ~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 125 ALGGLDILA-LVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HHTCCCEEE-ECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 344444 4442 2222 23577888776654
No 425
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=30.84 E-value=99 Score=25.55 Aligned_cols=50 Identities=14% Similarity=0.252 Sum_probs=34.5
Q ss_pred CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccC
Q 019298 159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214 (343)
Q Consensus 159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~a 214 (343)
|.+|.-++.++...+..++++... .++.++++++.+.|++.|+.+++|-.
T Consensus 109 fi~~~~qi~ea~~~GAD~ilLi~a------~l~~~~l~~l~~~a~~lGl~~lvEv~ 158 (251)
T 1i4n_A 109 FYIDTVQVKLASSVGADAILIIAR------ILTAEQIKEIYEAAEELGMDSLVEVH 158 (251)
T ss_dssp CCCSTHHHHHHHHTTCSEEEEEGG------GSCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHcCCCEEEEecc------cCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 556655666655556666655432 35667889999999988888888744
No 426
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=30.61 E-value=2e+02 Score=22.67 Aligned_cols=31 Identities=19% Similarity=0.189 Sum_probs=17.9
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCC
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRP 132 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p 132 (343)
.+++|.|+...=..+.+.|.+.|..|++..-
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 3555544444444555667778877776543
No 427
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=30.60 E-value=2.2e+02 Score=23.14 Aligned_cols=97 Identities=10% Similarity=0.048 Sum_probs=50.2
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc---hHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC
Q 019298 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI---YEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172 (343)
Q Consensus 99 ~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~---~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~ 172 (343)
....+++|.|++..=..+.+.|.+.|..|++..-.-.. ... .....|.++..+..+-. |.+.+++.+..
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~ 84 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS-----NEEEVAKLFDF 84 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCC-----SHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHH
Confidence 33455566555555555667788889888775322111 111 22233667776665432 45666554432
Q ss_pred -----CceEEEEeCCC-CCccc--ccCHHHHHHHHH
Q 019298 173 -----NTVALVIINPG-NPCGN--VYSYQHLQKLAE 200 (343)
Q Consensus 173 -----~~~~i~~~~p~-nptG~--~~~~~~l~~l~~ 200 (343)
...-+++++.. ...+. ..+.+++++..+
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 120 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDT 120 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 23334455542 22222 356777776655
No 428
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=30.58 E-value=2.1e+02 Score=23.66 Aligned_cols=155 Identities=8% Similarity=0.066 Sum_probs=84.8
Q ss_pred cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh---
Q 019298 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC--- 109 (343)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~--- 109 (343)
.+...|-+++.--++ ..--|.+.++..+++.++. ....+.+.+.++ +. . -.+++-+=.
T Consensus 40 ~GaD~iElGiPfSDP---~aDGpvIq~a~~rAL~~g~--------~~~~~~~~~~~~----r~---~-~Pivlm~Y~N~i 100 (252)
T 3tha_A 40 SPIDILELGVAYSDP---IADGEIIADAAKIALDQGV--------DIHSVFELLARI----KT---K-KALVFMVYYNLI 100 (252)
T ss_dssp SSCSEEEEECCCSCC---CSCCCHHHHHHHHHHHTTC--------CHHHHHHHHHHC----CC---S-SEEEEECCHHHH
T ss_pred cCCCEEEECCCCCCC---CCCcHHHHHHHHHHHHCCC--------CHHHHHHHHHHH----hc---C-CCEEEEeccCHH
Confidence 477888888776442 2233677777778776532 123333333322 11 1 134432221
Q ss_pred -HHHHHHHHHHhcCCC-CeEEEeCCCCcc---hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCC
Q 019298 110 -TQAIDVAMALLSRPG-ANILLPRPGFPI---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184 (343)
Q Consensus 110 -~~al~~~~~~l~~~g-d~vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~n 184 (343)
+-++...++.+.+.| |.+++++--+.. +...++..|++.+.+-. + . -+.+.+++..+.....+++.+-..
T Consensus 101 ~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lva-P-~---t~~eRi~~ia~~a~gFiY~Vs~~G 175 (252)
T 3tha_A 101 FSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVS-V-T---TPKERVKKLVKHAKGFIYLLASIG 175 (252)
T ss_dssp HHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEE-T-T---SCHHHHHHHHTTCCSCEEEECCSC
T ss_pred HHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeC-C-C---CcHHHHHHHHHhCCCeEEEEecCC
Confidence 223344444455555 888888766533 45567778888665422 1 1 135667766555556666655556
Q ss_pred CcccccCH-HHHHHHHHHHhhc-CcEEEE
Q 019298 185 PCGNVYSY-QHLQKLAETANKL-KTLVIA 211 (343)
Q Consensus 185 ptG~~~~~-~~l~~l~~~~~~~-~~~~i~ 211 (343)
-||..-.. +++.++++.++++ +..+++
T Consensus 176 vTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 176 ITGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp SSSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 78876332 3567777777765 444444
No 429
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=30.44 E-value=2.1e+02 Score=23.99 Aligned_cols=25 Identities=16% Similarity=0.044 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhhcCcE---EEEccCCC
Q 019298 192 YQHLQKLAETANKLKTL---VIADEVYG 216 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~---~i~D~ay~ 216 (343)
.+.+++.++.|.+.|+- +|+|--.+
T Consensus 154 ~~~l~~~i~~a~~~Gi~~~~IilDPg~G 181 (280)
T 1eye_A 154 RADLLASVADAVAAGVDPARLVLDPGLG 181 (280)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECCTT
T ss_pred HHHHHHHHHHHHHcCCChhhEEEECCCC
Confidence 57788899999999997 99998543
No 430
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=30.36 E-value=90 Score=27.48 Aligned_cols=27 Identities=15% Similarity=0.172 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCc
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGH 217 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~ 217 (343)
+.++.+++.++++++|+.+.+..-|..
T Consensus 104 ~~~ea~~l~~~A~~~g~~~~v~~~yr~ 130 (372)
T 4gmf_A 104 HPDDISSLQTLAQEQGCCYWINTFYPH 130 (372)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSGGG
T ss_pred CHHHHHHHHHHHHHcCCEEEEcCcccC
Confidence 568999999999999999999877643
No 431
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=30.35 E-value=2.2e+02 Score=23.14 Aligned_cols=65 Identities=14% Similarity=0.066 Sum_probs=31.2
Q ss_pred cEEEecC-hHHHH-HHHHHHhcCCCCeEEEeCCCCcc-hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 102 DVFVTSG-CTQAI-DVAMALLSRPGANILLPRPGFPI-YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 102 ~i~~~~g-~~~al-~~~~~~l~~~gd~vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
.+++|.+ ++.+| ..+.+.|.+.|..|++..-.-.. ........+.++..+..+- -|.+.+++.+.
T Consensus 9 ~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 76 (269)
T 2h7i_A 9 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDV-----QNEEHLASLAG 76 (269)
T ss_dssp EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCT-----TCHHHHHHHHH
T ss_pred EEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccC-----CCHHHHHHHHH
Confidence 4555544 14444 44555677788777765433222 2333333444444444432 24555555443
No 432
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=30.17 E-value=1.1e+02 Score=24.55 Aligned_cols=91 Identities=12% Similarity=0.048 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcch---HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc
Q 019298 110 TQAIDVAMALLSRPGANILLPRPGFPIY---ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt 186 (343)
++++..+.+. ...|.+|++..|.-..- ...+...|..+..++... .+++.+.+......|++--.+.
T Consensus 43 T~lL~~a~r~-~~~g~kVli~k~~~d~R~ge~~i~s~~g~~~~a~~~~~-------~~~~~~~~~~~~dvViIDEaQF-- 112 (214)
T 2j9r_A 43 EELIRRVRRT-QFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA-------SKDIFKHITEEMDVIAIDEVQF-- 112 (214)
T ss_dssp HHHHHHHHHH-HHTTCCEEEEECC-----------------CCEEECSS-------GGGGGGGCCSSCCEEEECCGGG--
T ss_pred HHHHHHHHHH-HHCCCEEEEEEeccCCcchHHHHHhhcCCeeEEeecCC-------HHHHHHHHhcCCCEEEEECccc--
Confidence 4555555544 45778888887665431 123333455544444321 1333333333455666655444
Q ss_pred ccccCHHHHHHHHHHHhhcCcEEEEccC
Q 019298 187 GNVYSYQHLQKLAETANKLKTLVIADEV 214 (343)
Q Consensus 187 G~~~~~~~l~~l~~~~~~~~~~~i~D~a 214 (343)
++.+.++.+.+++. .++.+|+=.-
T Consensus 113 ---~~~~~V~~l~~l~~-~~~~Vi~~Gl 136 (214)
T 2j9r_A 113 ---FDGDIVEVVQVLAN-RGYRVIVAGL 136 (214)
T ss_dssp ---SCTTHHHHHHHHHH-TTCEEEEEEC
T ss_pred ---CCHHHHHHHHHHhh-CCCEEEEEec
Confidence 55566755555554 4888887433
No 433
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=30.08 E-value=33 Score=31.31 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCcccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVF 220 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~ 220 (343)
.++++++++.|+++|+-||+|-++-+...
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (471)
T 1jae_A 74 ESAFTDMTRRCNDAGVRIYVDAVINHMTG 102 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 49999999999999999999999987543
No 434
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=30.01 E-value=82 Score=27.42 Aligned_cols=124 Identities=17% Similarity=0.036 Sum_probs=57.0
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEe-----cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEe
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVT-----SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF 151 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~-----~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~ 151 (343)
.|.+.|-+.+. .-++.+.+++.. +|=|.....++..+...|..|++.+.....-...++..|.....+
T Consensus 44 TG~~~LD~~Lg-------~GGl~~G~iv~I~G~pGsGKTtLal~la~~~~~~g~~vlyi~~E~~~~~~~a~~lG~~~~~l 116 (349)
T 2zr9_A 44 TGSISLDVALG-------IGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSL 116 (349)
T ss_dssp CSCHHHHHHTS-------SSSEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGC
T ss_pred cCCHHHHHHhc-------cCCccCCeEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEECCCCcCHHHHHHcCCCHHHe
Confidence 46676654431 014455555432 222333333333444455555554444332223355566543222
Q ss_pred ecCCCCCCCCCHHHHHh----hhc-CCceEEEEeCCCCCc---------ccc---c----CHHHHHHHHHHHhhcCcEEE
Q 019298 152 DLLPDKGWEVDLDDIES----LAD-QNTVALVIINPGNPC---------GNV---Y----SYQHLQKLAETANKLKTLVI 210 (343)
Q Consensus 152 ~~~~~~~~~~d~~~l~~----~~~-~~~~~i~~~~p~npt---------G~~---~----~~~~l~~l~~~~~~~~~~~i 210 (343)
.+... .+.+++.+ .++ .+++++++-++.... |.. . -.+.+.+|..+++++++.+|
T Consensus 117 ~i~~~----~~~e~~l~~~~~l~~~~~~~lIVIDsl~~l~~~~e~~~~~gd~~~~~q~r~~~~~l~~L~~~a~~~~~tVI 192 (349)
T 2zr9_A 117 LVSQP----DTGEQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAI 192 (349)
T ss_dssp EEECC----SSHHHHHHHHHHHHTTTCCSEEEEECGGGCCCHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEecC----CCHHHHHHHHHHHHhcCCCCEEEEcChHhhcchhhhccccccchhhHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 22111 13444333 222 357888887775432 111 0 02345667777788886555
Q ss_pred E
Q 019298 211 A 211 (343)
Q Consensus 211 ~ 211 (343)
+
T Consensus 193 ~ 193 (349)
T 2zr9_A 193 F 193 (349)
T ss_dssp E
T ss_pred E
Confidence 4
No 435
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=29.97 E-value=1.1e+02 Score=25.50 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=34.4
Q ss_pred CCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEcc
Q 019298 158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (343)
Q Consensus 158 ~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ 213 (343)
++.+|..+++++...+...|++... .++.++++++.+.|+++|+.++++-
T Consensus 120 dfiid~~qv~~A~~~GAD~VlLi~a------~l~~~~l~~l~~~a~~lGl~~lvev 169 (272)
T 3qja_A 120 DFVVQPYQIHEARAHGADMLLLIVA------ALEQSVLVSMLDRTESLGMTALVEV 169 (272)
T ss_dssp SCCCSHHHHHHHHHTTCSEEEEEGG------GSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCHHHHHHHHHcCCCEEEEecc------cCCHHHHHHHHHHHHHCCCcEEEEc
Confidence 3567777777776666777766443 2335778888888888888877653
No 436
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=29.88 E-value=2.1e+02 Score=22.67 Aligned_cols=64 Identities=16% Similarity=0.056 Sum_probs=31.5
Q ss_pred EEEecChHHHHHHHHHHhcCCCCeEEE-eCCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 103 VFVTSGCTQAIDVAMALLSRPGANILL-PRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~~~gd~vl~-~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
+++|.|+...=..+.+.|.+.|..|++ ..-.-...... ....+.++..+..+- -|.+.+++.+.
T Consensus 4 vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 71 (244)
T 1edo_A 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDV-----SKEADVEAMMK 71 (244)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCT-----TSHHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCC-----CCHHHHHHHHH
Confidence 444444443334555667778888776 33332222221 222355666555432 24566665554
No 437
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=29.70 E-value=36 Score=33.97 Aligned_cols=27 Identities=33% Similarity=0.380 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCcc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHL 218 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~ 218 (343)
.++++++++-|+++|+-||.|-+|.+.
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~ 395 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHT 395 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccc
Confidence 499999999999999999999999754
No 438
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=29.67 E-value=2.6e+02 Score=23.65 Aligned_cols=89 Identities=11% Similarity=0.100 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEecCh---HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC
Q 019298 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGC---TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156 (343)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~---~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 156 (343)
.++.+.+.+... ..-.|++..|+ .+++..+-.+-.-.-|.|++..|.|..
T Consensus 67 ~~v~~~~~~~~~-------grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~-------------------- 119 (303)
T 2wkj_A 67 EQVLEIVAEEAK-------GKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP-------------------- 119 (303)
T ss_dssp HHHHHHHHHHHT-------TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSC--------------------
T ss_pred HHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCC--------------------
Q ss_pred CCCCCCHHHHHhhhcC-----C-ceEEEEeCCCCCcccccCHHHHHHHHH
Q 019298 157 KGWEVDLDDIESLADQ-----N-TVALVIINPGNPCGNVYSYQHLQKLAE 200 (343)
Q Consensus 157 ~~~~~d~~~l~~~~~~-----~-~~~i~~~~p~nptG~~~~~~~l~~l~~ 200 (343)
++-+.+.+.++. . .++++++.|. .||..++.+.+.+|++
T Consensus 120 ----~s~~~l~~~f~~va~a~~~lPiilYn~P~-~tg~~l~~~~~~~La~ 164 (303)
T 2wkj_A 120 ----FSFEEHCDHYRAIIDSADGLPMVVYNIPA-LSGVKLTLDQINTLVT 164 (303)
T ss_dssp ----CCHHHHHHHHHHHHHHHTTCCEEEEECHH-HHCCCCCHHHHHHHHT
T ss_pred ----CCHHHHHHHHHHHHHhCCCCCEEEEeCcc-ccCCCCCHHHHHHHhc
No 439
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=29.58 E-value=1.4e+02 Score=22.37 Aligned_cols=59 Identities=20% Similarity=0.202 Sum_probs=37.2
Q ss_pred CCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCH-HHHHHHHH-HHhhcCc-EEEEccCCCc
Q 019298 159 WEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSY-QHLQKLAE-TANKLKT-LVIADEVYGH 217 (343)
Q Consensus 159 ~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~-~~l~~l~~-~~~~~~~-~~i~D~ay~~ 217 (343)
...+.+.|.+.+++ ++..+++-.|-|.-|..-.. ...+..++ +.++.++ +.++||.|..
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 34578899998876 67788888996655554211 23345553 3334454 4667998874
No 440
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=29.39 E-value=1.6e+02 Score=27.56 Aligned_cols=97 Identities=12% Similarity=0.103 Sum_probs=53.9
Q ss_pred EEEecChHHHHHHHHHHh---------cCCCCeEEEeCCCCcchHH-------HHHhcCceeEEeec-CCCCCCCCCHHH
Q 019298 103 VFVTSGCTQAIDVAMALL---------SRPGANILLPRPGFPIYEL-------SAAFRHIEVRHFDL-LPDKGWEVDLDD 165 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l---------~~~gd~vl~~~p~~~~~~~-------~~~~~g~~~~~~~~-~~~~~~~~d~~~ 165 (343)
+++++|++.-....+.-+ .++||+|++.....++... .....|++++.-.. ...-....+-++
T Consensus 294 vii~tgsqGe~~~~L~r~a~~~~~~~~~~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~SgHa~~~e 373 (555)
T 3zq4_A 294 TILCTGSQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHTSGHGGQEE 373 (555)
T ss_dssp EEEECCTTCCTTSHHHHHHSSCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCCCSSCCHHH
T ss_pred EEEeCCCCchHHHHHHHHhcCCCCccccCCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEEeCCCCHHH
Confidence 457777644333333322 2478999999887766542 23446777664100 011123457788
Q ss_pred HHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCc
Q 019298 166 IESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207 (343)
Q Consensus 166 l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 207 (343)
|+..++. +|+.++..+ |-. ..+.+.++++++.|+
T Consensus 374 L~~~~~~~~Pk~~ipvH-----Ge~---~~~~~~~~~a~~~G~ 408 (555)
T 3zq4_A 374 QKLMLRLIKPKFFMPIH-----GEY---RMQKMHVKLATDCGI 408 (555)
T ss_dssp HHHHHHHSCEEEEEEES-----BCH---HHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCEEEEcC-----CCH---HHHHHHHHHHHHcCC
Confidence 8776653 566555443 222 456777777777654
No 441
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=29.34 E-value=2.1e+02 Score=22.68 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=19.9
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCC
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~ 134 (343)
.+++|.|+...=..+.+.|.+.|..|++..-.-
T Consensus 16 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~ 48 (247)
T 3i1j_A 16 VILVTGAARGIGAAAARAYAAHGASVVLLGRTE 48 (247)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEecCH
Confidence 445555544444455666778888887765443
No 442
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=29.30 E-value=2e+02 Score=24.79 Aligned_cols=89 Identities=16% Similarity=0.131 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEecCh---HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC
Q 019298 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGC---TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156 (343)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~---~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 156 (343)
.++.+.+.+... ..-.|++..|+ .+++..+-.+-.-.-|.|++..|.|..
T Consensus 90 ~~vi~~~ve~~~-------grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~-------------------- 142 (332)
T 2r8w_A 90 RRAIEAAATILR-------GRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTP-------------------- 142 (332)
T ss_dssp HHHHHHHHHHHT-------TSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSC--------------------
T ss_pred HHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC--------------------
Q ss_pred CCCCCCHHHHHhhhcC-----CceEEEEeCCCCCcccccCHHHHHHHHH
Q 019298 157 KGWEVDLDDIESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKLAE 200 (343)
Q Consensus 157 ~~~~~d~~~l~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~l~~ 200 (343)
++-+.+.+.++. +.++++.+.|.. ||..++.+.+.+|++
T Consensus 143 ----~s~~~l~~~f~~VA~a~~lPiilYn~P~~-tg~~l~~e~~~~La~ 186 (332)
T 2r8w_A 143 ----LTQEEAYHHFAAVAGATALPLAIYNNPTT-TRFTFSDELLVRLAY 186 (332)
T ss_dssp ----CCHHHHHHHHHHHHHHCSSCEEEECCHHH-HCCCCCHHHHHHHHT
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEeCccc-cCcCCCHHHHHHHHc
No 443
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=29.30 E-value=48 Score=31.27 Aligned_cols=29 Identities=21% Similarity=0.318 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 35999999999999999999999998754
No 444
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=29.28 E-value=46 Score=31.36 Aligned_cols=29 Identities=21% Similarity=0.394 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~NH~~ 246 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVFNHAG 246 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 46999999999999999999999987754
No 445
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=29.11 E-value=1.4e+02 Score=25.38 Aligned_cols=76 Identities=8% Similarity=0.048 Sum_probs=0.0
Q ss_pred ecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCC
Q 019298 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (343)
Q Consensus 106 ~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~np 185 (343)
+++..+++..+-.+-.-.-|.+++..|.|.........+ ..++.++..++.++++++.|..
T Consensus 85 ~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~------------------f~~va~a~~~~lPiilYn~P~~- 145 (313)
T 3dz1_A 85 APGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTY------------------FRQATEAIGDDVPWVLQDYPLT- 145 (313)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHH------------------HHHHHHHHCTTSCEEEEECHHH-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHH------------------HHHHHHhCCCCCcEEEEeCccc-
Q ss_pred cccccCHHHHHHHHH
Q 019298 186 CGNVYSYQHLQKLAE 200 (343)
Q Consensus 186 tG~~~~~~~l~~l~~ 200 (343)
||..++.+.+.+|++
T Consensus 146 tg~~l~~~~~~~La~ 160 (313)
T 3dz1_A 146 LSVVMTPKVIRQIVM 160 (313)
T ss_dssp HCCCCCHHHHHHHHH
T ss_pred cCcCCCHHHHHHHHH
No 446
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=29.08 E-value=2.4e+02 Score=23.08 Aligned_cols=95 Identities=8% Similarity=-0.012 Sum_probs=48.0
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc-------hH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhh
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI-------YE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESL 169 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~-------~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 169 (343)
...+++|.|++..=..+.+.|.+.|.+|++..-.-.. .. ......+.++..+..+-. |.+.+++.
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~ 80 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR-----EEDQVRAA 80 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT-----CHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHHH
Confidence 3445555555544455566677888887766433221 22 222334667777765432 45555554
Q ss_pred hcC------CceEEEEeCCC-CCcc--cccCHHHHHHHHH
Q 019298 170 ADQ------NTVALVIINPG-NPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 170 ~~~------~~~~i~~~~p~-nptG--~~~~~~~l~~l~~ 200 (343)
++. +... ++++.. ...+ ...+.+++++..+
T Consensus 81 ~~~~~~~~g~iD~-lvnnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 81 VAATVDTFGGIDI-LVNNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp HHHHHHHHSCCCE-EEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHHHHcCCCCE-EEECCCcccCCCcccCCHHHHHHHHh
Confidence 432 3344 444442 2222 2356677765443
No 447
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=29.02 E-value=56 Score=29.58 Aligned_cols=95 Identities=12% Similarity=-0.011 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHhcCCCCeEEEeCCCCc----chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCC
Q 019298 109 CTQAIDVAMALLSRPGANILLPRPGFP----IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184 (343)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vl~~~p~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~n 184 (343)
..+.+..... ++++-..+.+.+|... .|..+.+..+ ++..+ -++-+.-+++.+++.+..+..-++...++.
T Consensus 281 ~~elid~y~~-lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg-~i~Iv---GDEl~vTn~~~i~~~Ie~~a~n~IlIKvnq 355 (441)
T 3qtp_A 281 VDGLIAEYVD-YGKHYPIASIEDPFAEDDWAAWNKFTVEHG-NFQIV---GDDLLVTNPARVQMAMDKNACNSVLIKVNQ 355 (441)
T ss_dssp HHHHHHHHHH-HHHHSCEEEEESCSCTTCHHHHHHHHHHTT-TSEEE---ESTTTTTCHHHHHHHHHHTCCSEEEECGGG
T ss_pred HHHHHHHHHH-HhhhcceeeecCCCChHHHHHHHHHHHhcC-CceEE---eccccccCHHHHHHHHHcCCCCEEEecccc
Confidence 3555554443 3344458889898764 3444555555 22212 222233478899988876665556666665
Q ss_pred CcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 185 PCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
-.|. .+..+++++|+++|..+++=
T Consensus 356 iGGI----TEalkaa~lA~~~G~~vmvs 379 (441)
T 3qtp_A 356 IGTL----TETFKTIKMAQEKGWGVMAS 379 (441)
T ss_dssp TCCH----HHHHHHHHHHHHTTCEEEEE
T ss_pred cccH----HHHHHHHHHHHHcCCeEEEe
Confidence 5444 47889999999999886653
No 448
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=28.85 E-value=40 Score=30.47 Aligned_cols=29 Identities=28% Similarity=0.448 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
+.++++++++.|+++|+-||+|-++-+..
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~~ 110 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHTS 110 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCc
Confidence 35999999999999999999999986643
No 449
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=28.67 E-value=68 Score=26.38 Aligned_cols=52 Identities=15% Similarity=0.200 Sum_probs=33.0
Q ss_pred HHHHHhhhcCCceEEEEeCCCCC----cccccCHH----HHHHHHHHHhhcCcEEEEccCC
Q 019298 163 LDDIESLADQNTVALVIINPGNP----CGNVYSYQ----HLQKLAETANKLKTLVIADEVY 215 (343)
Q Consensus 163 ~~~l~~~~~~~~~~i~~~~p~np----tG~~~~~~----~l~~l~~~~~~~~~~~i~D~ay 215 (343)
.+.+++++..+...+.+=.++.+ .| .++.+ ..+++.++|+++++.+|+++-+
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~-~l~~~~~~~~a~~l~~l~~~~~~~liInd~~ 105 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFG-PLQARDELAACEILADAAHRYGALFAVNDRA 105 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHC-SCCHHHHHHHHHHHHHHHHHTTCEEEEESCH
T ss_pred HHHHHHHHHCCCCEEEEccCCCCcccccc-CCCHHHHHHHHHHHHHHHHhhCCEEEEeCHH
Confidence 45666777767777666555432 01 12222 3467888999999999997644
No 450
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=28.54 E-value=2.3e+02 Score=22.82 Aligned_cols=65 Identities=12% Similarity=-0.053 Sum_probs=31.7
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCC-CCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRP-GFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p-~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
.+++|.|+...=..+.+.|.+.|..|++..- .-...... ....+.++..+..+- -|.+.+++.+.
T Consensus 23 ~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~ 91 (274)
T 1ja9_A 23 VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADI-----SKPSEVVALFD 91 (274)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHH
Confidence 4555544444334556667778877766533 22212111 222355555555432 24566665543
No 451
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=28.52 E-value=1.5e+02 Score=24.81 Aligned_cols=75 Identities=16% Similarity=0.111 Sum_probs=42.2
Q ss_pred CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh---cC-CceEEEEeCCCCCcccccCHHHHHHHHH
Q 019298 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA---DQ-NTVALVIINPGNPCGNVYSYQHLQKLAE 200 (343)
Q Consensus 125 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~---~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~ 200 (343)
..+++..+ .|..+++.+|++...+.-. ..+..+...+|.+.+ ++ +.+.|++ .++.+. .-.+.|.+
T Consensus 164 ~~~vt~H~---af~Y~~~~yGl~~~~~~~~-~~~~eps~~~l~~l~~~ik~~~v~~if~-e~~~~~------~~~~~l~~ 232 (282)
T 3mfq_A 164 RYLVTPHD---AFNYFAASYDFTLYAPQGV-STDSEVANSDMIETVNLIIDHNIKAIFT-ESTTNP------ERMKKLQE 232 (282)
T ss_dssp CEEECSSS---CCHHHHHHTTCEEECSSCS-SSCSCCCHHHHHHHHHHHHHHTCCEEEC-BTTSCT------HHHHHHHH
T ss_pred cEEEEECc---hHHHHHHHCCCeEeccccc-CCCCCCCHHHHHHHHHHHHHcCCCEEEE-eCCCCh------HHHHHHHH
Confidence 34444444 4456778999997754321 122345666665543 33 5566654 443222 45677788
Q ss_pred HHhhcCcEEE
Q 019298 201 TANKLKTLVI 210 (343)
Q Consensus 201 ~~~~~~~~~i 210 (343)
.+++.|+.++
T Consensus 233 ~a~~~g~~v~ 242 (282)
T 3mfq_A 233 AVKAKGGQVE 242 (282)
T ss_dssp HHHTTSCCCE
T ss_pred HHHhcCCceE
Confidence 8888876543
No 452
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=28.35 E-value=34 Score=31.34 Aligned_cols=27 Identities=22% Similarity=0.417 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
++++++++-|+++|+-||.|-++-+..
T Consensus 103 ~df~~Lv~~aH~~Gi~VilD~V~NH~s 129 (488)
T 2wc7_A 103 EAFKELLDAAHQRNIKVVLDGVFNHSS 129 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCcCC
Confidence 899999999999999999999987643
No 453
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=28.34 E-value=2.3e+02 Score=22.79 Aligned_cols=64 Identities=16% Similarity=0.145 Sum_probs=32.0
Q ss_pred cEEEecChHHHH-HHHHHHhcCCCCeEEEeCCCCcchHHHHH---hcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 102 DVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAA---FRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 102 ~i~~~~g~~~al-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
.+++.+|++.+| ..+.+.|.+.|..|++..-.-........ ..+.++..+..+-. |.+.+++.+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~ 73 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSS-----QESEVRSLF 73 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTT-----SHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCC-----CHHHHHHHH
Confidence 344444444444 45556677788888765433222222222 22556666655432 445555443
No 454
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=28.17 E-value=2.4e+02 Score=22.90 Aligned_cols=31 Identities=13% Similarity=0.189 Sum_probs=18.1
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCC
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRP 132 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p 132 (343)
.+++|.|+...=..+.+.|.+.|..|++..-
T Consensus 13 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 13 AAVITGGARRIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3455544444334555667778888776543
No 455
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=28.14 E-value=2.4e+02 Score=22.86 Aligned_cols=32 Identities=6% Similarity=-0.034 Sum_probs=19.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCC
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p 132 (343)
..+++|.|+...=..+.+.|.+.|..|++..-
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 60 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSR 60 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555555444444556667788888776543
No 456
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=28.11 E-value=2.7e+02 Score=23.35 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=20.9
Q ss_pred cEEEecCh---HHHHHHHHHHhcCCC-CeEEEeCCCCcc
Q 019298 102 DVFVTSGC---TQAIDVAMALLSRPG-ANILLPRPGFPI 136 (343)
Q Consensus 102 ~i~~~~g~---~~al~~~~~~l~~~g-d~vl~~~p~~~~ 136 (343)
.|++..|+ .+++..+-.+ .+-| |.|++..|.|..
T Consensus 72 pvi~Gvg~~~t~~ai~la~~a-~~~Gadavlv~~P~y~~ 109 (291)
T 3a5f_A 72 PVIAGTGSNNTAASIAMSKWA-ESIGVDGLLVITPYYNK 109 (291)
T ss_dssp CEEEECCCSSHHHHHHHHHHH-HHTTCSEEEEECCCSSC
T ss_pred cEEEeCCcccHHHHHHHHHHH-HhcCCCEEEEcCCCCCC
Confidence 46666554 5566554333 2334 889998998853
No 457
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=28.09 E-value=1.1e+02 Score=30.36 Aligned_cols=79 Identities=16% Similarity=0.122 Sum_probs=51.7
Q ss_pred CCCCcchHHHHHhc-CceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcE
Q 019298 131 RPGFPIYELSAAFR-HIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (343)
Q Consensus 131 ~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 208 (343)
-|+|.+........ +.++..+-+.+. .-.+.++++.. .+.+.+++.+.+-|. .+.+++.++|+++|+.
T Consensus 550 vp~y~sv~ea~~~~p~~DlaVI~vP~~----~v~~av~ea~~~~Gvk~~Viis~Gf~e------~~~~~l~~~A~~~g~r 619 (829)
T 3pff_A 550 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGIPE------ALTRKLIKKADQKGVT 619 (829)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCCCH------HHHHHHHHHHHHHTCE
T ss_pred cccCCcHHHHhhccCCCcEEEEeCCHH----HHHHHHHHHHhhCCCCEEEEeCCCCCH------HHHHHHHHHHHHcCCE
Confidence 46677766665543 344444333221 23678888888 788887776654443 4568899999999998
Q ss_pred EEEccCCCccc
Q 019298 209 VIADEVYGHLV 219 (343)
Q Consensus 209 ~i~D~ay~~~~ 219 (343)
+|==++.+...
T Consensus 620 liGPNc~Gii~ 630 (829)
T 3pff_A 620 IIGPATVGGIK 630 (829)
T ss_dssp EECSSCCCEEE
T ss_pred EEcCCCcccCc
Confidence 88777766543
No 458
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=28.07 E-value=2.3e+02 Score=22.63 Aligned_cols=94 Identities=12% Similarity=0.037 Sum_probs=45.9
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCC-CCcchH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRP-GFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p-~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
.+++|.|++..=..+.+.|.+.|..|++..- .-.... ......+.++..+..+- -|.+.+++.++.
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV-----ADADEVKAMIKEVVSQF 80 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHHc
Confidence 3455555444444556667788888866432 222222 22233466666665543 245665554432
Q ss_pred -CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 019298 173 -NTVALVIINPGNPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 -~~~~i~~~~p~nptG--~~~~~~~l~~l~~ 200 (343)
+...++.+....+.+ ...+.+++++..+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVID 111 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 344444332222222 2346677665443
No 459
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=27.88 E-value=2.7e+02 Score=23.33 Aligned_cols=77 Identities=16% Similarity=0.237 Sum_probs=41.9
Q ss_pred cEEEecCh---HHHHHHHHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceE
Q 019298 102 DVFVTSGC---TQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVA 176 (343)
Q Consensus 102 ~i~~~~g~---~~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ 176 (343)
.|++..|+ .+++..+- ...+-| |.|++..|.|.....-. -.+.++...+. +.++
T Consensus 72 pviaGvg~~~t~~ai~la~-~a~~~Gadavlv~~P~y~~~s~~~--------------------l~~~f~~ia~a~~lPi 130 (292)
T 2ojp_A 72 PVIAGTGANATAEAISLTQ-RFNDSGIVGCLTVTPYYNRPSQEG--------------------LYQHFKAIAEHTDLPQ 130 (292)
T ss_dssp CEEEECCCSSHHHHHHHHH-HTTTSSCSEEEEECCCSSCCCHHH--------------------HHHHHHHHHTTCSSCE
T ss_pred cEEEecCCccHHHHHHHHH-HHHhcCCCEEEECCCCCCCCCHHH--------------------HHHHHHHHHHhcCCCE
Confidence 47766554 55555433 333444 88999999885321100 01112221111 3456
Q ss_pred EEEeCCCCCcccccCHHHHHHHHH
Q 019298 177 LVIINPGNPCGNVYSYQHLQKLAE 200 (343)
Q Consensus 177 i~~~~p~nptG~~~~~~~l~~l~~ 200 (343)
++.+.|. .||..++.+.+.+|++
T Consensus 131 ilYn~P~-~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 131 ILYNVPS-RTGCDLLPETVGRLAK 153 (292)
T ss_dssp EEECCHH-HHSCCCCHHHHHHHHT
T ss_pred EEEeCcc-hhccCCCHHHHHHHHc
Confidence 6666665 5788888887777753
No 460
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=27.85 E-value=2e+02 Score=24.36 Aligned_cols=46 Identities=15% Similarity=0.065 Sum_probs=25.0
Q ss_pred CCCCCHHHHHhhhc----CCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298 158 GWEVDLDDIESLAD----QNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (343)
Q Consensus 158 ~~~~d~~~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 204 (343)
+..+|.+.+++.++ .+...+++ ..++--+..++.+|.+++++.+.+
T Consensus 30 dg~iD~~~l~~lv~~li~~Gv~gi~v-~GttGE~~~Lt~~Er~~v~~~~~~ 79 (304)
T 3l21_A 30 DGSLDTATAARLANHLVDQGCDGLVV-SGTTGESPTTTDGEKIELLRAVLE 79 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEEE-SSTTTTGGGSCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEe-CccccchhhCCHHHHHHHHHHHHH
Confidence 34577666666443 34444443 233334445666777777666654
No 461
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=27.72 E-value=53 Score=30.95 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 217 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 245 (583)
T 1ea9_C 217 DKDTLKKLVDLCHERGIRVLLDAVFNHSG 245 (583)
T ss_dssp CHHHHHHHHHHHTTTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccccCC
Confidence 56999999999999999999999998754
No 462
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=27.63 E-value=2.7e+02 Score=23.30 Aligned_cols=78 Identities=14% Similarity=0.222 Sum_probs=40.3
Q ss_pred cEEEecCh---HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEE
Q 019298 102 DVFVTSGC---TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV 178 (343)
Q Consensus 102 ~i~~~~g~---~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 178 (343)
.|++..|+ .+++..+-.+-.-.-|.|++..|.|.....-... . -..++.++. +.++++
T Consensus 71 pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~-----~------------~f~~ia~a~--~lPiil 131 (292)
T 2vc6_A 71 PVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIY-----Q------------HFKAIDAAS--TIPIIV 131 (292)
T ss_dssp CBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH-----H------------HHHHHHHHC--SSCEEE
T ss_pred cEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHH-----H------------HHHHHHHhC--CCCEEE
Confidence 46665554 5666554433222238899999988532110000 0 011222221 345666
Q ss_pred EeCCCCCcccccCHHHHHHHH
Q 019298 179 IINPGNPCGNVYSYQHLQKLA 199 (343)
Q Consensus 179 ~~~p~nptG~~~~~~~l~~l~ 199 (343)
.+.|. .||..++.+.+.+|+
T Consensus 132 Yn~P~-~tg~~l~~~~~~~La 151 (292)
T 2vc6_A 132 YNIPG-RSAIEIHVETLARIF 151 (292)
T ss_dssp EECHH-HHSCCCCHHHHHHHH
T ss_pred EeCcc-ccCcCCCHHHHHHHH
Confidence 66665 477778777776665
No 463
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=27.32 E-value=2.3e+02 Score=22.35 Aligned_cols=64 Identities=11% Similarity=0.020 Sum_probs=31.4
Q ss_pred cEEEecChHHHHHHHHHHhcCCC--CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPG--ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~g--d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
.+++|.|+...=..+.+.|.+.| ..|++..-.-..........+.++..+..+- -|.+.+++.+
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~~~ 70 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTV-----TCDKSLDTFV 70 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCT-----TCHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeec-----CCHHHHHHHH
Confidence 45555544444455666677788 7776654433322222221133455554432 2445555544
No 464
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=27.12 E-value=2.8e+02 Score=23.33 Aligned_cols=64 Identities=17% Similarity=0.086 Sum_probs=32.6
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH---hcCc--eeEEeecCCCCCCCCCHHHHHhhh
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA---FRHI--EVRHFDLLPDKGWEVDLDDIESLA 170 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~g~--~~~~~~~~~~~~~~~d~~~l~~~~ 170 (343)
.+++|.+++..=..+.+.|.+.|..|++..-.-........ ..+. .+..+..+- -|.+.+++++
T Consensus 10 ~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-----~~~~~v~~~~ 78 (319)
T 3ioy_A 10 TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDV-----ASREGFKMAA 78 (319)
T ss_dssp EEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCT-----TCHHHHHHHH
T ss_pred EEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCC-----CCHHHHHHHH
Confidence 45555544444444566677788888776544433332222 2232 455555432 2455555544
No 465
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=27.10 E-value=38 Score=22.72 Aligned_cols=25 Identities=16% Similarity=0.116 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhhcCcEEEEccCCCc
Q 019298 193 QHLQKLAETANKLKTLVIADEVYGH 217 (343)
Q Consensus 193 ~~l~~l~~~~~~~~~~~i~D~ay~~ 217 (343)
+--.+|.++++++|+.++.|..-..
T Consensus 27 ~~A~~I~~~A~e~~VPi~e~~~LAr 51 (83)
T 3bzy_B 27 AKALQIIKLAELYDIPVIEDIPLAR 51 (83)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHHH
Confidence 5568888999999999999976544
No 466
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=26.94 E-value=54 Score=30.67 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+++++|++.|+++|+-||+|-++.+..
T Consensus 79 ~~df~~Lv~~aH~~Gi~VilD~V~NHts 106 (557)
T 1zja_A 79 MEDFDRLMAELKKRGMRLMVDVVINHSS 106 (557)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4999999999999999999999987754
No 467
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=26.75 E-value=2.5e+02 Score=22.52 Aligned_cols=65 Identities=11% Similarity=-0.115 Sum_probs=31.5
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCC-CCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRP-GFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p-~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
.+++|.++...=..+.+.|.+.|..|++..- .-...... ....+.++..+..+- -|.+.+++.+.
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~ 77 (261)
T 1gee_A 9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDV-----TVESDVINLVQ 77 (261)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHH
Confidence 4555544444344555667777877776543 22211111 222355565555432 24555555443
No 468
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=26.65 E-value=1.5e+02 Score=20.05 Aligned_cols=90 Identities=11% Similarity=0.081 Sum_probs=48.1
Q ss_pred cEEEecChHHHHHHHHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEe
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~ 180 (343)
+|+++.++.-+... ++.|.+.| ..|.+.+..-..... ....+......+. -+.+.+++.+. +...++.+
T Consensus 7 ~v~I~G~G~iG~~~-~~~l~~~g~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~-------~~~~~~~~~~~-~~d~vi~~ 76 (118)
T 3ic5_A 7 NICVVGAGKIGQMI-AALLKTSSNYSVTVADHDLAALAV-LNRMGVATKQVDA-------KDEAGLAKALG-GFDAVISA 76 (118)
T ss_dssp EEEEECCSHHHHHH-HHHHHHCSSEEEEEEESCHHHHHH-HHTTTCEEEECCT-------TCHHHHHHHTT-TCSEEEEC
T ss_pred eEEEECCCHHHHHH-HHHHHhCCCceEEEEeCCHHHHHH-HHhCCCcEEEecC-------CCHHHHHHHHc-CCCEEEEC
Confidence 56666554444443 44455566 566666554332222 2233544443322 24677777665 56677766
Q ss_pred CCCCCcccccCHHHHHHHHHHHhhcCcEEE
Q 019298 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (343)
Q Consensus 181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i 210 (343)
.|... -..+.+.|.+.+...+
T Consensus 77 ~~~~~---------~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 77 APFFL---------TPIIAKAAKAAGAHYF 97 (118)
T ss_dssp SCGGG---------HHHHHHHHHHTTCEEE
T ss_pred CCchh---------hHHHHHHHHHhCCCEE
Confidence 64221 3567777888877644
No 469
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=26.63 E-value=78 Score=28.65 Aligned_cols=92 Identities=10% Similarity=-0.005 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCC
Q 019298 110 TQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (343)
Q Consensus 110 ~~al~~~~~~l~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~np 185 (343)
.+++....+.+ ++-+.+++.+|.... +..+.+... +++--++.+.-+...+++.+..+..-++...++.-
T Consensus 273 ~e~~~~~~~ll-~~y~i~~IEdPl~~dD~~g~~~L~~~~~-----ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv~qi 346 (439)
T 2akz_A 273 DQLGALYQDFV-RDYPVVSIEDPFDQDDWAAWSKFTANVG-----IQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQI 346 (439)
T ss_dssp HHHHHHHHHHH-HHSCEEEEECCSCTTCHHHHHHHHHTCS-----SEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHH
T ss_pred HHHHHHHHHHH-HhCCCcEEECCCCcccHHHHHHHHhCCC-----CEEEeCCCccCCHHHHHHHHHhCCCCEEEechhhc
Confidence 44444444333 344688999997643 222222222 22222232334889999988876655555555444
Q ss_pred cccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 186 CGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 186 tG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
.|. .+..+++++|+++|+.+++
T Consensus 347 GGi----tea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 347 GSV----TEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp CCH----HHHHHHHHHHHHTTCEEEE
T ss_pred CCH----HHHHHHHHHHHHCCCeEEe
Confidence 443 4788999999999987654
No 470
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=26.60 E-value=2.3e+02 Score=22.52 Aligned_cols=88 Identities=10% Similarity=-0.036 Sum_probs=45.7
Q ss_pred EEecChHHHHHHHHHHhcCC--C-CeE-EEeCCCCcchHHHHHhcCceeEEeecCCCCC-CCCCHHHHHhhhc-CCceEE
Q 019298 104 FVTSGCTQAIDVAMALLSRP--G-ANI-LLPRPGFPIYELSAAFRHIEVRHFDLLPDKG-WEVDLDDIESLAD-QNTVAL 177 (343)
Q Consensus 104 ~~~~g~~~al~~~~~~l~~~--g-d~v-l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~~~l~~~~~-~~~~~i 177 (343)
++.+|+.+.+..++..+.+. + +.+ ++.++.-......++..|..+..++.....+ -..+ +++.+.++ .++.++
T Consensus 8 vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~-~~~~~~l~~~~~Dli 86 (212)
T 3av3_A 8 VFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFE-SEILRELKGRQIDWI 86 (212)
T ss_dssp EECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHH-HHHHHHHHHTTCCEE
T ss_pred EEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhH-HHHHHHHHhcCCCEE
Confidence 45566666666677777644 2 222 3334333334566788898887664321110 0001 12333333 367777
Q ss_pred EEeCCCCCcccccCHHHHH
Q 019298 178 VIINPGNPCGNVYSYQHLQ 196 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l~ 196 (343)
++.. .|.+++.+-++
T Consensus 87 v~a~----y~~il~~~~l~ 101 (212)
T 3av3_A 87 ALAG----YMRLIGPTLLS 101 (212)
T ss_dssp EESS----CCSCCCHHHHH
T ss_pred EEch----hhhhCCHHHHh
Confidence 7654 46677755443
No 471
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=26.44 E-value=48 Score=31.69 Aligned_cols=28 Identities=21% Similarity=0.313 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCcc
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHL 218 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~ 218 (343)
+.+++++|++-|+++|+-||.|-++.+.
T Consensus 284 t~~df~~LV~~aH~~GI~VIlD~V~NHt 311 (645)
T 4aef_A 284 GDRAFVDLLSELKRFDIKVILDGVFHHT 311 (645)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHhhhcCCEEEEEeccccc
Confidence 5699999999999999999999998764
No 472
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=26.42 E-value=81 Score=26.19 Aligned_cols=50 Identities=14% Similarity=0.164 Sum_probs=38.0
Q ss_pred CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298 157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (343)
Q Consensus 157 ~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D 212 (343)
.+|-+|.-++.++..-+..+|++.. ..++.++++++.+.|++.|+-+++.
T Consensus 110 KDFiid~yQI~eAr~~GADaILLI~------a~L~~~~l~~l~~~A~~lGl~~LvE 159 (258)
T 4a29_A 110 SDFIVKESQIDDAYNLGADTVLLIV------KILTERELESLLEYARSYGMEPLIL 159 (258)
T ss_dssp ESCCCSHHHHHHHHHHTCSEEEEEG------GGSCHHHHHHHHHHHHHTTCCCEEE
T ss_pred ccccccHHHHHHHHHcCCCeeehHH------hhcCHHHHHHHHHHHHHHhHHHHHh
Confidence 4678899888887655666665532 4567789999999999999888773
No 473
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=26.39 E-value=1e+02 Score=24.55 Aligned_cols=36 Identities=8% Similarity=0.040 Sum_probs=24.1
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298 173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (343)
Q Consensus 173 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~ 211 (343)
.+..+++.-..|+.|..+..+++ .+++++||+.+|.
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l---~~fA~~h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDC---IQFGKKHGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHH---HHHHHHHTCCEEE
T ss_pred CceEEEEEEeECCCCCcCCHHHH---HHHHHHcCCcEEE
Confidence 45555544445899999776555 5556699987764
No 474
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=26.36 E-value=49 Score=31.07 Aligned_cols=28 Identities=18% Similarity=0.253 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+++++|++.|+++|+-||+|-++.+..
T Consensus 92 ~~df~~lv~~aH~~Gi~VilD~V~NH~s 119 (570)
T 1m53_A 92 MEDFDSLVAEMKKRNMRLMIDVVINHTS 119 (570)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4999999999999999999999987753
No 475
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=26.19 E-value=61 Score=30.73 Aligned_cols=29 Identities=31% Similarity=0.399 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 191 t~~d~~~lv~~~H~~Gi~VilD~V~NH~~ 219 (602)
T 2bhu_A 191 RPEDLMALVDAAHRLGLGVFLDVVYNHFG 219 (602)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 46999999999999999999999998764
No 476
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=26.15 E-value=2.4e+02 Score=22.26 Aligned_cols=71 Identities=20% Similarity=0.075 Sum_probs=36.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc-CceeEEeecCCCCCCCCCHHHHHhhhcC--CceEE
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR-HIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVAL 177 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i 177 (343)
..+++|.++...=..+.+.|.+.|..|++..-.-.......... +.++...++ -|.+.+++.+.. +...+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~id~v 80 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDL-------GDWEATERALGSVGPVDLL 80 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHTTCCCCCEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeC-------CCHHHHHHHHHHcCCCCEE
Confidence 45666655555445556667778877776543322222222222 344332221 256777777753 23444
Q ss_pred E
Q 019298 178 V 178 (343)
Q Consensus 178 ~ 178 (343)
+
T Consensus 81 i 81 (244)
T 3d3w_A 81 V 81 (244)
T ss_dssp E
T ss_pred E
Confidence 4
No 477
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=26.02 E-value=50 Score=30.88 Aligned_cols=28 Identities=14% Similarity=0.191 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++.|+++|+-||+|-++-+..
T Consensus 78 ~~df~~lv~~~h~~Gi~VilD~V~NH~s 105 (558)
T 1uok_A 78 MEDWDELLHEMHERNMKLMMDLVVNHTS 105 (558)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4999999999999999999999987643
No 478
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=26.01 E-value=3e+02 Score=23.24 Aligned_cols=102 Identities=9% Similarity=0.002 Sum_probs=52.6
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEE-EeCCCCcchHH-----HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-C
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANIL-LPRPGFPIYEL-----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-N 173 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl-~~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~ 173 (343)
..|++|.++-..=..+++.|.+.|..|. +....-..-.. .....+..++..++ -|.+.+.++++. +
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl-------~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI-------NEQEAMEKILKEHE 83 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT-------TCHHHHHHHHHHTT
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec-------CCHHHHHHHHhhCC
Confidence 4677765533333334555655565444 44433111111 11234555554433 267888887763 4
Q ss_pred ceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcC-cEEEEccCCC
Q 019298 174 TVALVIINP-GNPCGNVYSYQHLQKLAETANKLK-TLVIADEVYG 216 (343)
Q Consensus 174 ~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~-~~~i~D~ay~ 216 (343)
...|+.+.. .|..| ...+++.|++.+ +-.++=..|+
T Consensus 84 ~d~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~v~S~~g 121 (346)
T 3i6i_A 84 IDIVVSTVGGESILD-------QIALVKAMKAVGTIKRFLPSEFG 121 (346)
T ss_dssp CCEEEECCCGGGGGG-------HHHHHHHHHHHCCCSEEECSCCS
T ss_pred CCEEEECCchhhHHH-------HHHHHHHHHHcCCceEEeecccC
Confidence 566665544 34333 367888888887 5444434444
No 479
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=25.94 E-value=2.1e+02 Score=23.42 Aligned_cols=89 Identities=9% Similarity=0.110 Sum_probs=44.6
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEE
Q 019298 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL 177 (343)
Q Consensus 99 ~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i 177 (343)
.+..|++|.|+.-.=..+++.|.+.|..|....-. ..+ --|.+.++++++. +...|
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~D-------l~d~~~~~~~~~~~~~d~v 67 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------DLD-------ITNVLAVNKFFNEKKPNVV 67 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------TCC-------TTCHHHHHHHHHHHCCSEE
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------cCC-------CCCHHHHHHHHHhcCCCEE
Confidence 34455555554333344556677778777655432 011 1356777777754 56666
Q ss_pred EEeCCCCCccc-ccCHH--------HHHHHHHHHhhcCcEEE
Q 019298 178 VIINPGNPCGN-VYSYQ--------HLQKLAETANKLKTLVI 210 (343)
Q Consensus 178 ~~~~p~nptG~-~~~~~--------~l~~l~~~~~~~~~~~i 210 (343)
+.+........ .-+.+ -...+++.|++.+..+|
T Consensus 68 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv 109 (292)
T 1vl0_A 68 INCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIV 109 (292)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEE
T ss_pred EECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 65443221110 01111 13567788877765333
No 480
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=25.89 E-value=2.6e+02 Score=22.43 Aligned_cols=33 Identities=15% Similarity=0.027 Sum_probs=19.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCC
Q 019298 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPG 133 (343)
Q Consensus 101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~ 133 (343)
..+++|.++...=..+.+.|.+.|..|++..-.
T Consensus 8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 345555554444445556677788777766433
No 481
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=25.80 E-value=2.7e+02 Score=22.68 Aligned_cols=94 Identities=13% Similarity=0.041 Sum_probs=46.7
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEe-CCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLP-RPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~-~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 172 (343)
.+++|.|++..=..+.+.|.+.|..|++. ...-..... .....+.++..+..+-. |.+.+++.++.
T Consensus 29 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 29 VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS-----DPAAVRRLFATAEEAF 103 (267)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHHHc
Confidence 45555554444455566677788888764 322222222 22344666666655432 45666554432
Q ss_pred CceEEEEeCCC-CCcc--cccCHHHHHHHHH
Q 019298 173 NTVALVIINPG-NPCG--NVYSYQHLQKLAE 200 (343)
Q Consensus 173 ~~~~i~~~~p~-nptG--~~~~~~~l~~l~~ 200 (343)
...-+++++.. .+.+ ...+.+++++..+
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIA 134 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 23334455542 2222 2356677765443
No 482
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=25.75 E-value=2.6e+02 Score=22.40 Aligned_cols=65 Identities=11% Similarity=0.002 Sum_probs=31.4
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEeecCCCCCCCCCHHHHHhhhc
Q 019298 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (343)
Q Consensus 102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 171 (343)
.+++|.++...=..+.+.|.+.|..|++..-.-..... .....+.++..+..+- -|.+.+++.++
T Consensus 16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~ 84 (265)
T 1h5q_A 16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV-----SNTDIVTKTIQ 84 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeC-----CCHHHHHHHHH
Confidence 45555544444445556677778777655432222211 1122255555555432 24565655443
No 483
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=25.72 E-value=2.2e+02 Score=23.23 Aligned_cols=43 Identities=12% Similarity=0.103 Sum_probs=26.2
Q ss_pred CHHHHHhhhcCCceEEEEeCCC-CCcccccCHHHHHHHHHHHhhcCc
Q 019298 162 DLDDIESLADQNTVALVIINPG-NPCGNVYSYQHLQKLAETANKLKT 207 (343)
Q Consensus 162 d~~~l~~~~~~~~~~i~~~~p~-nptG~~~~~~~l~~l~~~~~~~~~ 207 (343)
|.+.++++++ +...|+.+... ++.. ...+..+.+++.|++.++
T Consensus 55 d~~~l~~~~~-~~d~vi~~a~~~~~~~--~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 55 NQESMVEAFK-GMDTVVFIPSIIHPSF--KRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CHHHHHHHTT-TCSEEEECCCCCCSHH--HHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHh-CCCEEEEeCCCCccch--hhHHHHHHHHHHHHHcCC
Confidence 6788888776 45666655432 2211 122556788888888874
No 484
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=25.52 E-value=2.6e+02 Score=23.25 Aligned_cols=148 Identities=15% Similarity=0.132 Sum_probs=66.6
Q ss_pred CcHHHHHHHHHHHhcCCC-------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC
Q 019298 53 TTHVATEAVAEALLSEKF-------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA 125 (343)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd 125 (343)
....+++.+++.+.+.-+ ..|....|.......+++-|.. -++ .++++.++..+ ..+.... ..-.
T Consensus 21 ~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~-----~~~-DlIiai~t~aa-~a~~~~~-~~iP 92 (302)
T 3lkv_A 21 ALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVG-----ENP-DVLVGIATPTA-QALVSAT-KTIP 92 (302)
T ss_dssp HHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHT-----TCC-SEEEEESHHHH-HHHHHHC-SSSC
T ss_pred hHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHh-----cCC-cEEEEcCCHHH-HHHHhhc-CCCC
Confidence 335566666666653210 1234456777766666666632 233 46666665443 3333332 2212
Q ss_pred eEEE--eCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHh
Q 019298 126 NILL--PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203 (343)
Q Consensus 126 ~vl~--~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 203 (343)
.|.+ .+|.-..+......-|..+..+.- .....-.++.+.+.+....++.++.+++.+... ...+.+-+.++
T Consensus 93 VVf~~v~dp~~~~l~~~~~~~g~nvtGv~~--~~~~~~~l~l~~~l~P~~k~vgvi~~~~~~~s~----~~~~~~~~~~~ 166 (302)
T 3lkv_A 93 IVFTAVTDPVGAKLVKQLEQPGKNVTGLSD--LSPVEQHVELIKEILPNVKSIGVVYNPGEANAV----SLMELLKLSAA 166 (302)
T ss_dssp EEEEEESCTTTTTSCSCSSSCCSSEEEEEC--CCCHHHHHHHHHHHSTTCCEEEEEECTTCHHHH----HHHHHHHHHHH
T ss_pred eEEEecCCcchhhhcccccCCCCcEEEEEC--CcCHHHHHHHHHHhCCCCCEEEEEeCCCcccHH----HHHHHHHHHHH
Confidence 3332 233322222111222334443321 011111123333333333455566666543322 34566667778
Q ss_pred hcCcEEEEccC
Q 019298 204 KLKTLVIADEV 214 (343)
Q Consensus 204 ~~~~~~i~D~a 214 (343)
++|+-++.-..
T Consensus 167 ~~g~~~v~~~~ 177 (302)
T 3lkv_A 167 KHGIKLVEATA 177 (302)
T ss_dssp HTTCEEEEEEC
T ss_pred HcCCEEEEEec
Confidence 88887765443
No 485
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=25.29 E-value=41 Score=32.12 Aligned_cols=30 Identities=17% Similarity=0.112 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccccC
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLVFG 221 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~ 221 (343)
.++++++++.|+++|+-||.|-+|.+...+
T Consensus 181 ~~~~~~lv~~~H~~Gi~VilD~V~nH~~~~ 210 (637)
T 1gjw_A 181 DEEFKAFVEACHILGIRVILDFIPRTAARD 210 (637)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEETT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCCcCc
Confidence 499999999999999999999999876543
No 486
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=24.90 E-value=2.2e+02 Score=22.71 Aligned_cols=87 Identities=8% Similarity=0.034 Sum_probs=44.9
Q ss_pred EEecChHHHHHHHHHHhcCCC---CeE-EEeCCCCcchHHHHHhcCceeEEeecCCCCC-CCCCHHHHHhhhc-CCceEE
Q 019298 104 FVTSGCTQAIDVAMALLSRPG---ANI-LLPRPGFPIYELSAAFRHIEVRHFDLLPDKG-WEVDLDDIESLAD-QNTVAL 177 (343)
Q Consensus 104 ~~~~g~~~al~~~~~~l~~~g---d~v-l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~~~l~~~~~-~~~~~i 177 (343)
++.+|+.+.+..++..+.+.+ +.+ ++.++.-......++..|+.+..++.....+ -..| +++.+.++ .++.++
T Consensus 6 vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~-~~~~~~l~~~~~Dli 84 (216)
T 2ywr_A 6 VLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFPSKKEFE-ERMALELKKKGVELV 84 (216)
T ss_dssp EEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSSSHHHHH-HHHHHHHHHTTCCEE
T ss_pred EEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcccccchhhhh-HHHHHHHHhcCCCEE
Confidence 455666566666777776544 232 3334333334566788898887654321110 0001 22333333 367777
Q ss_pred EEeCCCCCcccccCHHHH
Q 019298 178 VIINPGNPCGNVYSYQHL 195 (343)
Q Consensus 178 ~~~~p~nptG~~~~~~~l 195 (343)
++.. .|.+++.+-+
T Consensus 85 v~a~----y~~il~~~~l 98 (216)
T 2ywr_A 85 VLAG----FMRILSHNFL 98 (216)
T ss_dssp EESS----CCSCCCHHHH
T ss_pred EEeC----chhhCCHHHH
Confidence 7654 4666665444
No 487
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.90 E-value=2.7e+02 Score=22.39 Aligned_cols=14 Identities=0% Similarity=-0.121 Sum_probs=7.1
Q ss_pred HHHHHHHHHHhhcC
Q 019298 193 QHLQKLAETANKLK 206 (343)
Q Consensus 193 ~~l~~l~~~~~~~~ 206 (343)
++.++.++-+++.|
T Consensus 141 ee~~~~i~~l~~~G 154 (225)
T 2pju_A 141 EDARGQINELKANG 154 (225)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCC
Confidence 45555555555444
No 488
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=24.87 E-value=2.4e+02 Score=21.84 Aligned_cols=91 Identities=10% Similarity=0.053 Sum_probs=47.4
Q ss_pred EEEecChHHHHHHHHHHhc-CCCCeEEEeCCCCc-chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEe
Q 019298 103 VFVTSGCTQAIDVAMALLS-RPGANILLPRPGFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180 (343)
Q Consensus 103 i~~~~g~~~al~~~~~~l~-~~gd~vl~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~ 180 (343)
|++|.++...=..+.+.|. +.|..|.+..-.-. ...... ..+.++..+..+- -|.+.++++++ +...++.+
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~-----~d~~~~~~~~~-~~d~vv~~ 80 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSF-----QNPGXLEQAVT-NAEVVFVG 80 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCT-----TCHHHHHHHHT-TCSEEEES
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCC-----CCHHHHHHHHc-CCCEEEEc
Confidence 5666544433344555666 68877766543221 111111 1333444444332 36788888775 45555544
Q ss_pred CCCCCcccccCHHHHHHHHHHHhhcCc
Q 019298 181 NPGNPCGNVYSYQHLQKLAETANKLKT 207 (343)
Q Consensus 181 ~p~nptG~~~~~~~l~~l~~~~~~~~~ 207 (343)
.... +.+ .+.+++.+++.+.
T Consensus 81 ag~~------n~~-~~~~~~~~~~~~~ 100 (221)
T 3r6d_A 81 AMES------GSD-MASIVKALSRXNI 100 (221)
T ss_dssp CCCC------HHH-HHHHHHHHHHTTC
T ss_pred CCCC------Chh-HHHHHHHHHhcCC
Confidence 3321 113 7788888887764
No 489
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=24.85 E-value=54 Score=31.03 Aligned_cols=29 Identities=28% Similarity=0.304 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
+.+++++|++-|+++|+-||+|-++-+..
T Consensus 197 t~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 225 (601)
T 3edf_A 197 SNEDFVRLSTEARKRGMGLIQDVVLSHIG 225 (601)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECCcccC
Confidence 34899999999999999999999987643
No 490
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=24.83 E-value=67 Score=30.58 Aligned_cols=29 Identities=17% Similarity=0.244 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 201 ~~~~~~~lv~~~H~~Gi~VilD~V~NH~~ 229 (618)
T 3m07_A 201 TPDDFKAFIDAAHGYGLSVVLDIVLNHFG 229 (618)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEeecCccCC
Confidence 46999999999999999999999998764
No 491
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=24.59 E-value=55 Score=30.89 Aligned_cols=28 Identities=29% Similarity=0.258 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.++++++++.|+++|+-||+|-++.+..
T Consensus 87 ~~df~~lv~~~h~~Gi~VilD~V~NH~~ 114 (589)
T 3aj7_A 87 NEDCFALIEKTHKLGMKFITDLVINHCS 114 (589)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 4999999999999999999999988753
No 492
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=24.56 E-value=50 Score=31.80 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (343)
Q Consensus 192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~ 219 (343)
.+++++|++-|+++|+-||+|-++-+..
T Consensus 111 ~~df~~Lv~~aH~~GIkVilD~V~NHts 138 (680)
T 1cyg_A 111 LSDFQRLVDAAHAKGIKVIIDFAPNHTS 138 (680)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCCC
Confidence 4999999999999999999999987653
No 493
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=24.55 E-value=2.1e+02 Score=24.06 Aligned_cols=63 Identities=14% Similarity=0.114 Sum_probs=0.0
Q ss_pred eEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCCCCCcccccCHHHHHHHHHHHhhc---CcEEEE
Q 019298 148 VRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPCGNVYSYQHLQKLAETANKL---KTLVIA 211 (343)
Q Consensus 148 ~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~---~~~~i~ 211 (343)
+..+.+.-..+..+|.+.+++.++. +...+ +...++--+..++.+|.+++++.+.+. ++.+|.
T Consensus 6 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl-~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 6 IVAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSI-VAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEE-EESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred EeeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEE-EECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
No 494
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=24.49 E-value=71 Score=30.35 Aligned_cols=30 Identities=23% Similarity=0.235 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccCCCcccc
Q 019298 191 SYQHLQKLAETANKLKTLVIADEVYGHLVF 220 (343)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~ 220 (343)
+.++++++++-|+++|+-||.|-++.+...
T Consensus 203 t~~~~~~lv~~~H~~Gi~VilD~V~NH~~~ 232 (617)
T 1m7x_A 203 TRDDFRYFIDAAHAAGLNVILDWVPGHFPT 232 (617)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTSCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCcccC
Confidence 569999999999999999999999988643
No 495
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=24.25 E-value=3.3e+02 Score=23.14 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=20.8
Q ss_pred cEEEecC---hHHHHHHHHHHhcCCCCeEEEeCCCCcc
Q 019298 102 DVFVTSG---CTQAIDVAMALLSRPGANILLPRPGFPI 136 (343)
Q Consensus 102 ~i~~~~g---~~~al~~~~~~l~~~gd~vl~~~p~~~~ 136 (343)
.|++..| ..+++..+-.+-.-.-|.|++..|.|..
T Consensus 93 pViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~ 130 (315)
T 3si9_A 93 PVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNR 130 (315)
T ss_dssp CBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred cEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 5666554 4556655433322223899999998853
No 496
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=24.23 E-value=3e+02 Score=23.24 Aligned_cols=119 Identities=8% Similarity=-0.033 Sum_probs=55.7
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc----hHHHHHhc----Ccee
Q 019298 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFR----HIEV 148 (343)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~----~~~~~~~~----g~~~ 148 (343)
.|..+..+.+.+-+. .....|++|.++...=..+++.|.+.|..|++..-.-.. ........ +.++
T Consensus 10 ~~~~~~~~~~~~~~~------~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 83 (352)
T 1sb8_A 10 MGMMSRYEELRKELP------AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 83 (352)
T ss_dssp --CCCHHHHHHHHHH------HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTE
T ss_pred hHHHHHHHhhchhcC------ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCce
Confidence 455566666666653 233456666554333344455666677776654322211 11111111 1233
Q ss_pred EEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccc-cCH--------HHHHHHHHHHhhcCc
Q 019298 149 RHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV-YSY--------QHLQKLAETANKLKT 207 (343)
Q Consensus 149 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~-~~~--------~~l~~l~~~~~~~~~ 207 (343)
..+..+- -|.+.++++++ +...|+.+......+.. -+. .-...+++.|++.++
T Consensus 84 ~~~~~Dl-----~d~~~~~~~~~-~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 145 (352)
T 1sb8_A 84 KFIQGDI-----RNLDDCNNACA-GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV 145 (352)
T ss_dssp EEEECCT-----TSHHHHHHHHT-TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EEEECCC-----CCHHHHHHHhc-CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3333221 25677777776 55666654432211110 011 223567788877764
No 497
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=24.14 E-value=2.3e+02 Score=24.92 Aligned_cols=71 Identities=8% Similarity=-0.004 Sum_probs=37.1
Q ss_pred cCCCCeEEEeCCCCcch----------HHHHHhcCceeEEeecCCCC-C-CC-CC---HHHHHhhhcC-CceEEEEeCCC
Q 019298 121 SRPGANILLPRPGFPIY----------ELSAAFRHIEVRHFDLLPDK-G-WE-VD---LDDIESLADQ-NTVALVIINPG 183 (343)
Q Consensus 121 ~~~gd~vl~~~p~~~~~----------~~~~~~~g~~~~~~~~~~~~-~-~~-~d---~~~l~~~~~~-~~~~i~~~~p~ 183 (343)
+++||+|-+..|+.+.. ...++..|++++.-+..... + +. -| .++|.+++.+ ..++|+.....
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 35788888888886532 11334567777765433221 1 11 12 4445556654 45666555554
Q ss_pred CCcccccC
Q 019298 184 NPCGNVYS 191 (343)
Q Consensus 184 nptG~~~~ 191 (343)
.-+-.+++
T Consensus 120 yga~rlLp 127 (371)
T 3tla_A 120 DNSNSLLP 127 (371)
T ss_dssp SCGGGGGG
T ss_pred ccHHHHHh
Confidence 44444443
No 498
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=24.00 E-value=1.7e+02 Score=25.56 Aligned_cols=52 Identities=19% Similarity=0.309 Sum_probs=33.5
Q ss_pred HHHHHHHHhhhCCCCCCCCcEE-Eec--------ChHHHHHHHHHHhc---CCCCeEEEeCCCCcc
Q 019298 83 RRAIAEYLSRDLPYKLTPNDVF-VTS--------GCTQAIDVAMALLS---RPGANILLPRPGFPI 136 (343)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~-~~~--------g~~~al~~~~~~l~---~~gd~vl~~~p~~~~ 136 (343)
-++++++|.+.+| +.+++|. ++. -+...|..++..|. ++||.+++-=-+|+.
T Consensus 77 A~~m~~~L~~~~G--f~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pgD~llfYFSGHG~ 140 (350)
T 4f6o_A 77 AHNIFNFLTNGYG--YSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSLFLHYSGHGG 140 (350)
T ss_dssp HHHHHHHHHHHSC--CCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTTCEEEEEEESCEE
T ss_pred HHHHHHHHHHhcC--CCccceeeecccccccccCCCHHHHHHHHHHHHHhCCCCCEEEEEEcCCce
Confidence 3567777776555 4566664 443 24667777777774 478998876656654
No 499
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=23.99 E-value=1.4e+02 Score=26.09 Aligned_cols=125 Identities=17% Similarity=0.098 Sum_probs=57.4
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe-----cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEE
Q 019298 76 TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT-----SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150 (343)
Q Consensus 76 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~-----~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~ 150 (343)
+.|.++|-+.+. . -++.+..++.. +|=|.....++..+...|..|++.+.........++..|.....
T Consensus 43 ~TG~~~LD~~Lg------~-GGi~~G~i~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~~~~ra~rlgv~~~~ 115 (356)
T 3hr8_A 43 PTGSLAIDIATG------V-GGYPRGRIVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALDPVYAKNLGVDLKS 115 (356)
T ss_dssp CCSCHHHHHHTS------S-SSEETTEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHHTCCGGG
T ss_pred cCCCHHHHHHhc------c-CCccCCcEEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccccchHHHHHcCCchhh
Confidence 357676655442 0 14556655432 22244444444444444445544444443333345555654322
Q ss_pred eecCCCCCCCCCHHHHHh----hhc-CCceEEEEeCCCCCc---------cccc-------CHHHHHHHHHHHhhcCcEE
Q 019298 151 FDLLPDKGWEVDLDDIES----LAD-QNTVALVIINPGNPC---------GNVY-------SYQHLQKLAETANKLKTLV 209 (343)
Q Consensus 151 ~~~~~~~~~~~d~~~l~~----~~~-~~~~~i~~~~p~npt---------G~~~-------~~~~l~~l~~~~~~~~~~~ 209 (343)
+.+... .+.+++.. .++ ..++++++-+-..-. |..- -.+.++.|..+++++++.+
T Consensus 116 l~i~~~----~~~e~~l~~~~~l~~~~~~dlvVIDSi~~l~~~~el~g~~G~~q~~~qar~la~~L~~L~~lak~~~~tV 191 (356)
T 3hr8_A 116 LLISQP----DHGEQALEIVDELVRSGVVDLIVVDSVAALVPRAEIEGAMGDMQVGLQARLMSQALRKIAGSVNKSKAVV 191 (356)
T ss_dssp CEEECC----SSHHHHHHHHHHHHHTSCCSEEEEECTTTCCCHHHHTTCCCSSCSSHHHHHHHHHHHHHHHHHHTSSCEE
T ss_pred hhhhhc----cCHHHHHHHHHHHhhhcCCCeEEehHhhhhcChhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhcCCEE
Confidence 211111 23344333 222 356777776543322 2110 0134566777888888766
Q ss_pred EE
Q 019298 210 IA 211 (343)
Q Consensus 210 i~ 211 (343)
|+
T Consensus 192 I~ 193 (356)
T 3hr8_A 192 IF 193 (356)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 500
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=23.98 E-value=2.7e+02 Score=21.97 Aligned_cols=74 Identities=20% Similarity=0.014 Sum_probs=38.1
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh-cCceeEEeecCCCCCCCCCHHHHHhhhcC--CceE
Q 019298 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-RHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVA 176 (343)
Q Consensus 100 ~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~ 176 (343)
...+++|.|+...=..+.+.|.+.|..|++..-.-......... .+.++...++ -|.+.+++.+.. +...
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDL-------GDWDATEKALGGIGPVDL 79 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHTTCCCCSE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecC-------CCHHHHHHHHHHcCCCCE
Confidence 34566665554444556666777888877654433222222222 2444432221 256777777763 2344
Q ss_pred EEEe
Q 019298 177 LVII 180 (343)
Q Consensus 177 i~~~ 180 (343)
++.+
T Consensus 80 vi~~ 83 (244)
T 1cyd_A 80 LVNN 83 (244)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 4433
Done!