Query 019299
Match_columns 343
No_of_seqs 309 out of 1848
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 08:19:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019299.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019299hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1397 Ca2+/H+ antiporter VCX 100.0 1.1E-73 2.3E-78 541.9 23.6 337 4-342 5-356 (441)
2 TIGR00378 cax calcium/proton e 100.0 8.3E-54 1.8E-58 416.8 25.2 268 71-342 1-271 (349)
3 TIGR00846 caca2 calcium/proton 100.0 1.6E-52 3.4E-57 409.7 28.3 280 58-342 6-287 (365)
4 COG0387 ChaA Ca2+/H+ antiporte 100.0 1.3E-49 2.9E-54 380.1 27.3 270 66-342 13-287 (368)
5 PRK10734 putative calcium/sodi 100.0 1.2E-36 2.5E-41 293.5 25.2 231 90-342 6-240 (325)
6 PRK10599 calcium/sodium:proton 100.0 1.8E-36 4E-41 293.0 23.2 239 92-342 43-287 (366)
7 TIGR00367 K+-dependent Na+/Ca+ 100.0 2E-33 4.3E-38 269.5 25.0 229 90-342 5-236 (307)
8 COG0530 ECM27 Ca2+/Na+ antipor 100.0 4.8E-33 1E-37 267.2 23.9 227 88-342 11-241 (320)
9 TIGR00927 2A1904 K+-dependent 99.9 6.7E-22 1.4E-26 206.2 20.3 129 99-246 472-603 (1096)
10 KOG1307 K+-dependent Ca2+/Na+ 99.9 1.8E-21 3.9E-26 189.1 10.4 123 100-245 73-202 (588)
11 PLN03151 cation/calcium exchan 99.7 2.6E-16 5.7E-21 163.5 24.1 131 97-245 153-287 (650)
12 PRK10734 putative calcium/sodi 99.6 4E-15 8.7E-20 143.9 16.3 139 90-247 177-318 (325)
13 COG0530 ECM27 Ca2+/Na+ antipor 99.6 4.9E-15 1.1E-19 142.7 14.8 139 89-246 177-318 (320)
14 TIGR00846 caca2 calcium/proton 99.6 1.3E-14 2.8E-19 142.5 13.9 137 89-243 223-362 (365)
15 PF01699 Na_Ca_ex: Sodium/calc 99.6 1.2E-14 2.6E-19 122.8 11.2 136 97-244 1-139 (140)
16 TIGR00927 2A1904 K+-dependent 99.5 1E-14 2.2E-19 153.1 8.1 153 89-253 935-1090(1096)
17 KOG1307 K+-dependent Ca2+/Na+ 99.5 5.6E-15 1.2E-19 144.2 4.0 184 42-247 384-576 (588)
18 TIGR00367 K+-dependent Na+/Ca+ 99.5 1.5E-13 3.2E-18 132.2 13.3 133 89-241 172-307 (307)
19 TIGR00378 cax calcium/proton e 99.4 4.9E-12 1.1E-16 123.7 13.3 135 91-243 209-346 (349)
20 TIGR00845 caca sodium/calcium 99.4 6.9E-12 1.5E-16 133.4 13.6 89 88-176 755-847 (928)
21 PRK10599 calcium/sodium:proton 98.7 2.1E-07 4.6E-12 91.0 14.0 137 91-245 226-364 (366)
22 PLN03151 cation/calcium exchan 98.7 8.1E-07 1.8E-11 93.1 17.4 166 71-249 457-640 (650)
23 PF01699 Na_Ca_ex: Sodium/calc 98.6 3E-08 6.4E-13 83.6 2.7 57 286-342 1-57 (140)
24 KOG2399 K+-dependent Na+:Ca2+ 98.4 2.4E-06 5.3E-11 88.4 13.0 227 96-342 116-513 (605)
25 TIGR00845 caca sodium/calcium 98.4 1.4E-06 3.1E-11 93.4 9.7 77 97-173 87-187 (928)
26 COG0387 ChaA Ca2+/H+ antiporte 98.2 3.2E-05 7E-10 75.3 13.3 138 89-244 223-363 (368)
27 KOG2399 K+-dependent Na+:Ca2+ 98.1 8.7E-05 1.9E-09 77.1 16.3 163 71-246 420-599 (605)
28 KOG1306 Ca2+/Na+ exchanger NCX 98.0 1.6E-06 3.5E-11 86.2 1.7 102 89-190 428-533 (596)
29 KOG1397 Ca2+/H+ antiporter VCX 97.2 0.0015 3.3E-08 63.9 8.9 129 97-243 300-431 (441)
30 KOG1306 Ca2+/Na+ exchanger NCX 87.8 0.44 9.4E-06 48.4 3.1 62 278-339 428-489 (596)
31 PF05915 DUF872: Eukaryotic pr 40.5 1.3E+02 0.0028 24.8 6.8 22 88-109 76-97 (115)
32 PF09788 Tmemb_55A: Transmembr 36.9 67 0.0015 30.2 5.0 50 273-322 194-243 (256)
33 PF12270 Cyt_c_ox_IV: Cytochro 31.8 3.3E+02 0.0071 23.3 10.4 26 222-247 35-60 (137)
34 PF11683 DUF3278: Protein of u 30.4 2.3E+02 0.0049 23.6 6.9 10 238-247 78-87 (129)
35 PF11368 DUF3169: Protein of u 29.6 1.3E+02 0.0029 27.8 5.9 7 245-251 72-78 (248)
36 PRK11281 hypothetical protein; 29.3 9.3E+02 0.02 27.8 13.4 17 145-161 642-658 (1113)
37 PF08370 PDR_assoc: Plant PDR 28.3 61 0.0013 24.0 2.7 25 147-171 29-54 (65)
38 PF09622 DUF2391: Putative int 27.9 5.3E+02 0.012 24.5 10.2 23 302-324 202-224 (267)
39 PRK14750 kdpF potassium-transp 25.9 1.3E+02 0.0027 18.7 3.2 22 226-247 3-24 (29)
40 COG4146 Predicted symporter [G 24.8 94 0.002 31.3 4.0 59 180-238 109-169 (571)
41 PF01758 SBF: Sodium Bile acid 23.7 4.9E+02 0.011 22.6 10.3 58 47-104 15-73 (187)
42 COG4736 CcoQ Cbb3-type cytochr 23.4 74 0.0016 23.2 2.3 23 229-251 13-35 (60)
43 COG3086 RseC Positive regulato 22.1 3.7E+02 0.008 23.2 6.6 51 68-118 83-133 (150)
44 PF09125 COX2-transmemb: Cytoc 21.9 1.3E+02 0.0029 19.7 2.9 21 229-249 18-38 (38)
45 PF04178 Got1: Got1/Sft2-like 21.8 3.5E+02 0.0076 22.1 6.4 18 159-176 32-49 (118)
46 PF12263 DUF3611: Protein of u 20.7 6.1E+02 0.013 22.6 9.3 70 230-302 63-132 (183)
47 PF10066 DUF2304: Uncharacteri 20.6 4.6E+02 0.01 21.2 9.3 36 275-312 31-66 (115)
48 PF05684 DUF819: Protein of un 20.4 4.8E+02 0.01 25.9 8.2 53 276-328 206-259 (378)
49 PF11694 DUF3290: Protein of u 20.1 5.6E+02 0.012 22.0 8.6 18 294-311 80-97 (149)
50 PRK13027 C4-dicarboxylate tran 20.0 8.5E+02 0.018 24.6 9.9 28 295-324 273-300 (421)
No 1
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-73 Score=541.89 Aligned_cols=337 Identities=57% Similarity=0.896 Sum_probs=306.2
Q ss_pred CCCc--ccccCC----cccchhhhhcccccCCCCCccccccCCccceeccchhhhHHHHHhhhHhhccchhHHHHHHHHH
Q 019299 4 TEPW--LMENGS----VKVLSKEIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPL 77 (343)
Q Consensus 4 ~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~p~ 77 (343)
++|| ..|+|+ .|...++.+++++.+++.++..|||+|..+.++.+++.+|....++|++++++|+|.+++|+|+
T Consensus 5 ~~~~~~i~e~~~~~~~~~~~~~~l~~~~s~~~~~~s~~~~k~~l~~~~~~~w~~~k~~~~~l~~Vll~~~l~~lf~f~pl 84 (441)
T KOG1397|consen 5 PEPWSLIAEHGRANPLAKGFKRELRAGRSAHNMASSLLEKKSLLSLIKHAPWKYLKNVLTNLQEVLLSTKLNLLFPFVPL 84 (441)
T ss_pred cccHHHHHHhcCCCccccccchhhhccccccchhHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4677 366665 4667778888999999999999999998888889999999999999999999999999999999
Q ss_pred HHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhhHHhhhcchhHHHHHHHHhhCCCcceehhhhhhH
Q 019299 78 AIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGS 157 (343)
Q Consensus 78 ~i~~~~~~~~~~~~F~l~~l~ii~la~~l~~~~e~lA~~~G~~vggll~a~~gslpElivsi~Al~~g~~~iv~g~ilGS 157 (343)
++..|+..|+..|+|.+++++++|+|+++++++||+|.++|+++||++||+|||+.|++++++|+++|+.++|+++++||
T Consensus 85 ~~~~h~~~~s~~~vF~lsll~iiPLA~~l~~ateqls~~tg~tvGgllNAtfGnaiElii~ilALk~g~~riVq~SlLGS 164 (441)
T KOG1397|consen 85 AIIAHWFTWSKGWVFLLSLLGIIPLAERLGFATEQLSAYTGPTVGGLLNATFGNAIELIIYILALKNGKVRIVQGSLLGS 164 (441)
T ss_pred HHHHhhhcccchHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcHHHHHhhhhccHHHHHHHHHHhhcCceEEEehhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccch---hhhccccchhHhHHHH
Q 019299 158 ILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDI---TAKATLQLSRASSIVM 234 (343)
Q Consensus 158 il~NlllvlG~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~---~~~~~~~lsr~~siiL 234 (343)
+++|+|+++|+|+++||++ |++|+||++.+++++.|+.++++++++|++++++.++... .+...+.+||.+|++|
T Consensus 165 ILsnlLLvlG~s~~~Ggi~--rk~Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~Sivm 242 (441)
T KOG1397|consen 165 ILSNLLLVLGLSLFCGGIR--RKDQRFNIKSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVM 242 (441)
T ss_pred HHHHHHHHhhHHHhhcccc--cceeecccchhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHH
Confidence 9999999999999999997 7999999999999999999999999999999987432111 1234688999999999
Q ss_pred HHHHHHHHHHHHHhhhh--hccccCCCCC--CCC--CCccCCCcchHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCC
Q 019299 235 LIGYFAYLVFQLWTHRE--FFEAQEDSED--DDD--VTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGI 308 (343)
Q Consensus 235 l~~Y~~yl~f~l~th~~--~f~~~~~~~~--~~~--~~~~~~~~~~~~~i~~Lv~~~~~i~~~s~~lV~si~~i~~~~gi 308 (343)
++.|++|++||+||||+ .|..+++||+ |++ ++||.|.++.|++++||++.|++++++|||+|++||+.++++|+
T Consensus 243 liaYi~~L~FqL~t~~h~~~~~~~~ee~~~~d~~~s~~~e~p~is~~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~l 322 (441)
T KOG1397|consen 243 LIAYIAYLWFQLKTARHIWQFPTPDEEETEQDDEVSNEDEAPNISRWSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGL 322 (441)
T ss_pred HHHHHHHHHHhhhcccccCCCCCCChhcccccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999764 4444333321 222 25677899999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHhhhhhHHHHHHHHHHHhcCcccC
Q 019299 309 SVSFISIILLPIVGNAAEHAGAIIFAFKNKLVSN 342 (343)
Q Consensus 309 s~~fiGlillpi~tnlpE~~~AI~aA~kgk~dla 342 (343)
|++|+|+|++|+++|++||++||.+|.|||+|++
T Consensus 323 s~~FiglillpiVgNaaEh~~AI~fA~k~kldLs 356 (441)
T KOG1397|consen 323 SVKFIGLILLPIVGNAAEHAGAISFAMKDKLDLS 356 (441)
T ss_pred ChhhheeeeecccCchHHhhcceeeeecCcccch
Confidence 9999999999999999999999999999999987
No 2
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=100.00 E-value=8.3e-54 Score=416.77 Aligned_cols=268 Identities=41% Similarity=0.622 Sum_probs=235.0
Q ss_pred HHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhhHHhhhcchhHHHHHHHHhhCCCccee
Q 019299 71 LFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVV 150 (343)
Q Consensus 71 ll~~~p~~i~~~~~~~~~~~~F~l~~l~ii~la~~l~~~~e~lA~~~G~~vggll~a~~gslpElivsi~Al~~g~~~iv 150 (343)
|++|+|+++++++++|++.++|++|+++++|+|+++++++|++|+++|+.+||++++++||+||+++++.|+++|+++++
T Consensus 1 ~l~~vp~~~~~~~~~~~~~~~F~~~~~aiipla~~l~~~~~~lA~~~g~~vggl~~~~~gt~pEL~vsi~A~~~g~~~i~ 80 (349)
T TIGR00378 1 LLVFVPLSLIWGHFQWSHTLTFLFNFLAIIPLAAIMGNATEELADKAGPTIGGLLNATFGNAVELIVSIIALKEGLVRIV 80 (349)
T ss_pred CceeeeHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHhhccHHHHHHHHHHHHcCChhhh
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHh
Q 019299 151 KYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRAS 230 (343)
Q Consensus 151 ~g~ilGSil~NlllvlG~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~ 230 (343)
+||++|||++|+++++|+|++++|+|+ ++|.++++.++.+..+++++++.+++|+.++....+.. +.....+||++
T Consensus 81 ~gnivGS~i~NllLilGls~liggl~~--~~q~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~~--~~~~~~ls~~~ 156 (349)
T TIGR00378 81 QASLTGSLLGNLLLVLGLCFFFGGLNY--KQQTFNQTAARTNSSLLAIACVALLIPAARATLSHGKE--DGKILNLSRGT 156 (349)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcccc--ceeecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCcc--chHHHHHHHHH
Confidence 999999999999999999999999984 88999998888877888888899999987643221100 11234689999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccccCCCCCC-CCC--CccCCCcchHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcC
Q 019299 231 SIVMLIGYFAYLVFQLWTHREFFEAQEDSEDD-DDV--TEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWG 307 (343)
Q Consensus 231 siiLl~~Y~~yl~f~l~th~~~f~~~~~~~~~-~~~--~~~~~~~~~~~~i~~Lv~~~~~i~~~s~~lV~si~~i~~~~g 307 (343)
|++++++|++|++||+|+||+.|++++++++| +++ ++++++++.|+.+.+++++++.++++||++|++++++++.+|
T Consensus 157 aiill~lY~~~L~~~l~~h~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~v~i~~~a~~lv~~~~~~~~~~g 236 (349)
T TIGR00378 157 SIVIIIVYVLFLYFQLGTHHALYEQQEAETDEVMETIERNPHHSLSVKSSTVVLLGTTVIVAFCSEFLVGTIDNVVESTG 236 (349)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHhCCcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999988754322111 111 111223567788889999999999999999999999999999
Q ss_pred CCchhHHHHHHHhhhhhHHHHHHHHHHHhcCcccC
Q 019299 308 ISVSFISIILLPIVGNAAEHAGAIIFAFKNKLVSN 342 (343)
Q Consensus 308 is~~fiGlillpi~tnlpE~~~AI~aA~kgk~dla 342 (343)
+|+.|+|++++|++||+||+++|+.+|+|||+|+|
T Consensus 237 i~~~~igl~iva~~tslpE~~~ai~aa~~~~~~~a 271 (349)
T TIGR00378 237 LSKLFIGVIVIPIVGNAAEHATAVLVAMKDKMDLA 271 (349)
T ss_pred CCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcccH
Confidence 99999999999999999999999999999999986
No 3
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=100.00 E-value=1.6e-52 Score=409.74 Aligned_cols=280 Identities=59% Similarity=0.880 Sum_probs=242.7
Q ss_pred hhhHhhccchhHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhhHHhhhcchhHHHH
Q 019299 58 NIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELII 137 (343)
Q Consensus 58 ~~~~~~~~~~l~~ll~~~p~~i~~~~~~~~~~~~F~l~~l~ii~la~~l~~~~e~lA~~~G~~vggll~a~~gslpEliv 137 (343)
-.|++++.+|+|++++|+|++++.++.+|++.++|++++++++|+|+++++++|++|+|+|..+||++++++||+||+++
T Consensus 6 ~~~~~~~~~~~~~ll~fvp~~~~~~~~~~~~~~~F~~~~~~li~~a~~lv~~a~~lA~~~G~~vG~ll~a~~ts~pEL~v 85 (365)
T TIGR00846 6 VLQEVILGSWLNILLIFVPAAIILGLWGWSQTVIFLLNLLGIIPLAERVSFATEQLAHRLGPTLGGLLNATFGNAVELII 85 (365)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhHHHHHHhHHHHHHH
Confidence 35788899999999999999999999999999999999999999999999999999999998899999999999999999
Q ss_pred HHHHhhCCCcceehhhhhhHHHHHHHHHHHHHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccc
Q 019299 138 AIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSD 217 (343)
Q Consensus 138 si~Al~~g~~~iv~g~ilGSil~NlllvlG~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~ 217 (343)
++.|+.+|++++++||++|||++|+++++|+|++++|++. .++|.++++.......++.++++.+++|..+++..+.
T Consensus 86 si~A~~~g~~~la~gnivGS~i~NilLIlGl~~l~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~-- 162 (365)
T TIGR00846 86 SLMALGEGKVEVVRASLLGSILSNLLLVLGLSLFLGGIKN-IREQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPG-- 162 (365)
T ss_pred HHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cceeeccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCC--
Confidence 9999999999999999999999999999999999998863 2357788877665566788888888889876432110
Q ss_pred hhhhccccchhHhHHHHHHHHHHHHHHHHHhhhhhccccCCCCCC-CCCCccCC-CcchHHHHHHHHHHHHHHHHhHHHH
Q 019299 218 ITAKATLQLSRASSIVMLIGYFAYLVFQLWTHREFFEAQEDSEDD-DDVTEETP-VIGFWSGFAWLVGMTAIIALLSEFV 295 (343)
Q Consensus 218 ~~~~~~~~lsr~~siiLl~~Y~~yl~f~l~th~~~f~~~~~~~~~-~~~~~~~~-~~~~~~~i~~Lv~~~~~i~~~s~~l 295 (343)
.+....++|++|++++++|++|++||+++||+.|+++++++++ ++++++++ +.+.|+++.++++++++++++++++
T Consensus 163 --~~~~~~ls~~~giill~ly~~yl~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~l~~~a~~l 240 (365)
T TIGR00846 163 --QDSILGLSRGIAIVMLILYGAFLVFQLVTHRQLFEPQEEADSDYDDEVHEEPTVISPWSAAAWLVGATIVVALLAEYL 240 (365)
T ss_pred --cchhHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 0123458999999999999999999999999987643322211 11122233 3567889999999999999999999
Q ss_pred HHHHHHHHhhcCCCchhHHHHHHHhhhhhHHHHHHHHHHHhcCcccC
Q 019299 296 VGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLVSN 342 (343)
Q Consensus 296 V~si~~i~~~~gis~~fiGlillpi~tnlpE~~~AI~aA~kgk~dla 342 (343)
|++++++++.+|+|+.|+|++++|++||+||+++++.+|+||+.|+|
T Consensus 241 v~~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si~aa~~g~~~la 287 (365)
T TIGR00846 241 VDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIA 287 (365)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcchH
Confidence 99999999999999999999999999999999999999999999986
No 4
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-49 Score=380.08 Aligned_cols=270 Identities=32% Similarity=0.465 Sum_probs=247.1
Q ss_pred chhHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhhHHhhhcchhHHHHHHHHhhCC
Q 019299 66 TKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGR 145 (343)
Q Consensus 66 ~~l~~ll~~~p~~i~~~~~~~~~~~~F~l~~l~ii~la~~l~~~~e~lA~~~G~~vggll~a~~gslpElivsi~Al~~g 145 (343)
++++.++.|+|+....+..+|++.++|+.++++++|+|.++++++|++|+|.||++|+++|+++||+.|+++.+.++++|
T Consensus 13 ~~~~~l~afv~~~l~~~~~~~~~~~~fi~~~l~i~plA~~v~~aaE~lA~~vG~~~G~Lina~f~~~iEvil~~~al~~G 92 (368)
T COG0387 13 SLILPLLAFVPLVLIWGIFQTGPVVIFIAALLAIIPLAFSVVRAAEVLAARVGEPYGSLINALFGNAIEVILIVAALKSG 92 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 66889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceehhhhhhHHHHHHHHHHHHHHhhcccccccccccchhhhcchHHHHHHHH-HHHHHHHHHHHhhhcccchhhhccc
Q 019299 146 KIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLA-LLCHMLPLLFKYAAASSDITAKATL 224 (343)
Q Consensus 146 ~~~iv~g~ilGSil~NlllvlG~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la-~l~l~lP~~~~~~~~~~~~~~~~~~ 224 (343)
++.++++++.||++.|+++++|+|++.||+|+ ++|.||...++.++.++..+ ++.+++|+++.++..+ ....
T Consensus 93 ~~~lvr~Si~gsIm~~~llv~GlslllGglr~--~~Q~fN~~~a~~~~~~L~~~~~ialv~P~~~~~~~~~-----~~~~ 165 (368)
T COG0387 93 SPTLVRDSLYGSIMINLLLVVGLSLLLGGLRH--KTQPFNPHGAGTYLALLFTAATIALVLPTFFPYTGGG-----NFSL 165 (368)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHcchhh--ceeecchhhHHHHHHHHHHHHHHHhhhhhhhcccCCC-----cchH
Confidence 99999999999999999999999999999985 99999999999998887776 8999999999766421 1336
Q ss_pred cchhHhHHHHHHHHHHHHHHHHHhhhhhccccCCCCC--CC--CCCccCCCcchHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 019299 225 QLSRASSIVMLIGYFAYLVFQLWTHREFFEAQEDSED--DD--DVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIE 300 (343)
Q Consensus 225 ~lsr~~siiLl~~Y~~yl~f~l~th~~~f~~~~~~~~--~~--~~~~~~~~~~~~~~i~~Lv~~~~~i~~~s~~lV~si~ 300 (343)
.+|+.++++++++|+.+++||++|||++|++++++|. |+ +..+++++++.+++..+|+++++.++++||+++.++|
T Consensus 166 ~~s~~~avv~i~~Y~lfL~fql~tH~~~f~~~~~~e~~~ee~~~h~~~~~~~s~~~s~~vLl~~tv~v~~lae~lv~~le 245 (368)
T COG0387 166 GQSLFVAVVLIALYGLFLFFQLKTHASLFWQVHEAEGEAEEDDPHHDDPSKWSVLLSTGVLLIATVLVALLAEILVGSLE 245 (368)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999987655431 11 1234456788999999999999999999999999999
Q ss_pred HHHhhcCCCchhHHHHHHHhhhhhHHHHHHHHHHHhcCcccC
Q 019299 301 DASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLVSN 342 (343)
Q Consensus 301 ~i~~~~gis~~fiGlillpi~tnlpE~~~AI~aA~kgk~dla 342 (343)
+..+++|.|+.|+|+++.|+++|+||+++|+++|+|||+|++
T Consensus 246 ~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~~~mqls 287 (368)
T COG0387 246 AVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALNNRMQLS 287 (368)
T ss_pred HHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHhccHHHH
Confidence 999999999999999999999999999999999999999975
No 5
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=100.00 E-value=1.2e-36 Score=293.49 Aligned_cols=231 Identities=25% Similarity=0.274 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHHH
Q 019299 90 WVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVL 166 (343)
Q Consensus 90 ~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g~~~iv~g~ilGSil~Nlllvl 166 (343)
..++++++.++.++++++++++.+|+++| +.+.|+++.++| |+||+++++.|+.+|++++++||++|||++|+++++
T Consensus 6 ~~~~~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~g~~~ia~GnilGSni~ni~lil 85 (325)
T PRK10734 6 ALLIIGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNILLIL 85 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHH
Confidence 46788999999999999999999999999 788888888888 999999999999999999999999999999999999
Q ss_pred HHHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHHHH
Q 019299 167 GTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQL 246 (343)
Q Consensus 167 G~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~l 246 (343)
|++.++++++ .+.+..+++.. .++..+++..+ +. .+.+++|++|++++++|+.|+++++
T Consensus 86 g~~~l~~~~~---~~~~~~~~~~~---~ll~~~~~~~~----~~-----------~~~~l~~~~g~~ll~~~~~yl~~~~ 144 (325)
T PRK10734 86 GLAALIRPFT---VHSDVLRRELP---LMLLVSVLAGS----VL-----------YDGQLSRSDGIFLLLLAVLWLLFIV 144 (325)
T ss_pred HHHHHhCCcc---cChHHHHHHHH---HHHHHHHHHHH----HH-----------HCCcCcHHHHHHHHHHHHHHHHHHH
Confidence 9999987653 22222222111 12222111111 11 2346889999999999999999999
Q ss_pred HhhhhhccccCCCCCCCCCCccCCC-cchHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCchhHHHHHHHhhhhhH
Q 019299 247 WTHREFFEAQEDSEDDDDVTEETPV-IGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAA 325 (343)
Q Consensus 247 ~th~~~f~~~~~~~~~~~~~~~~~~-~~~~~~i~~Lv~~~~~i~~~s~~lV~si~~i~~~~gis~~fiGlillpi~tnlp 325 (343)
|+||+..++++++++++ ++++.++ .+.++.+.+++++.+++.++++++|++.+.+++.+|+|+.++|++++|++||+|
T Consensus 145 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~~~l~~gs~~lv~~~~~ia~~lgis~~~iG~tiva~gtslP 223 (325)
T PRK10734 145 KIARLAERQGNDSLTRE-QLAELPREGGLPVAFLWLGIALIIMPMATRMVIDNATVLANYFAISELTIGLTVIAIGTSLP 223 (325)
T ss_pred HHHHhcccccccccchh-hhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhccHH
Confidence 99986422111111111 1111111 245667889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCcccC
Q 019299 326 EHAGAIIFAFKNKLVSN 342 (343)
Q Consensus 326 E~~~AI~aA~kgk~dla 342 (343)
|+++++.++|||+.|+|
T Consensus 224 E~~~sv~a~~~g~~~~a 240 (325)
T PRK10734 224 ELATAIAGARKGENDIA 240 (325)
T ss_pred HHHHHHHHHHcCCCchH
Confidence 99999999999999986
No 6
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=100.00 E-value=1.8e-36 Score=293.03 Aligned_cols=239 Identities=21% Similarity=0.256 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhhHHhhhcchhH--HHHHHHHhhCCCcceehhhhhhHHHHHHHHHHHHH
Q 019299 92 FALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATE--LIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTS 169 (343)
Q Consensus 92 F~l~~l~ii~la~~l~~~~e~lA~~~G~~vggll~a~~gslpE--livsi~Al~~g~~~iv~g~ilGSil~NlllvlG~~ 169 (343)
+...+.+++..+...++.+|.+|+|+||++|.++++..-...| ++++++..-++++.++..++.-.....+..++|+|
T Consensus 43 ~~~~~~~i~~~~~~~v~hAe~lA~~~GeP~GtliLtlsv~~iEv~li~~~Ml~g~~~~tlaRDtvfa~vMi~~nGilGl~ 122 (366)
T PRK10599 43 NLLALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVGFS 122 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHhccHHHHH
Confidence 3444455666889999999999999999999999998889999 34455544567899999999999888888899999
Q ss_pred Hhhcccccccccccchhhhc-chHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHHHHHh
Q 019299 170 LFCGGIANLRKEQKYDRKQA-DVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWT 248 (343)
Q Consensus 170 ~l~gg~~~~~~~~~~~~~~a-~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~l~t 248 (343)
+++||+|+ ++|+||.+.+ +....++.++++++++|.++.. + ......++..+++++++|+.|++||++|
T Consensus 123 ll~GGlr~--~eQ~fn~~ga~~~~~~ll~La~l~LvlP~~~~~-~-------~~s~~~s~~~avv~lvlY~~fL~fQl~t 192 (366)
T PRK10599 123 LLLGGRKF--ATQYMNLFGIKQYLIALFPLAIIVLVFPMALPG-A-------NFSTGQALLVALISAAMYGVFLLIQTKT 192 (366)
T ss_pred HHHhcccc--CeeecCHHhHHHHHHHHHHHHHHHHhcCcccCC-C-------ccchhHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999995 9999999866 5667899999999999987531 1 1223568899999999999999999999
Q ss_pred hhhhccccCCCCCC-CCCCccCCC--cchHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCchhHHHHHHHhhhhhH
Q 019299 249 HREFFEAQEDSEDD-DDVTEETPV--IGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAA 325 (343)
Q Consensus 249 h~~~f~~~~~~~~~-~~~~~~~~~--~~~~~~i~~Lv~~~~~i~~~s~~lV~si~~i~~~~gis~~fiGlillpi~tnlp 325 (343)
||++|++++++++| +++++++|+ ...| +..+|+++++.++++||+++.++|+..+++|+|+.|+|+++ |+.+|+|
T Consensus 193 Hr~~F~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvII-aiv~~ap 270 (366)
T PRK10599 193 HQSLFVYEHEDEGDDDDPHHGKPSAHSSLW-HAIWLIIHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLV-ALLILSP 270 (366)
T ss_pred hHHHhccccccccccccccccccccchhHH-HHHHHHHHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHH-HHHHcch
Confidence 99999853322222 111222222 3334 56889999999999999999999999999999999999885 9999999
Q ss_pred HHHHHHHHHHhcCcccC
Q 019299 326 EHAGAIIFAFKNKLVSN 342 (343)
Q Consensus 326 E~~~AI~aA~kgk~dla 342 (343)
|+++|+++|+|||+|.|
T Consensus 271 E~~tAV~aA~kNkmq~s 287 (366)
T PRK10599 271 EGLGALKAVLNNQVQRA 287 (366)
T ss_pred hHHHHHHHHHcCchHHH
Confidence 99999999999999975
No 7
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=100.00 E-value=2e-33 Score=269.51 Aligned_cols=229 Identities=22% Similarity=0.227 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHHH
Q 019299 90 WVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVL 166 (343)
Q Consensus 90 ~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g~~~iv~g~ilGSil~Nlllvl 166 (343)
..|.+++..++.++++++++++++|+++| +.+.|++++++| |+||+++++.|.++|+.++++||++|||++|+++++
T Consensus 5 ~~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~g~~~la~g~ilGS~l~n~l~i~ 84 (307)
T TIGR00367 5 GYLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLIGQPDIGVGNVIGSNIFNILLIL 84 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhcCCCCeehhhhhhHHHHHHHHHH
Confidence 45788999999999999999999999999 888888888777 999999999999999999999999999999999999
Q ss_pred HHHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHHHH
Q 019299 167 GTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQL 246 (343)
Q Consensus 167 G~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~l 246 (343)
|++.++++.+. +.+.+.+ +. ..++++...+.+ +. .+.+++|++|++++++|+.|+++++
T Consensus 85 g~~~l~~~~~~--~~~~~~~-d~----~~~l~~~~~~~~---~~-----------~~g~i~~~~gi~ll~~Yv~yl~~~~ 143 (307)
T TIGR00367 85 GLSAIFSPIIV--DTDWLRR-DF----SFYLLVSILLLF---FG-----------LDGPISRLDGVVLLFLYVVYLLFLV 143 (307)
T ss_pred HHHHhhcceee--chHHHHH-HH----HHHHHHHHHHHH---HH-----------HhCcchHHHHHHHHHHHHHHHHHHH
Confidence 99999875431 1222222 11 122222222211 11 2346899999999999999999999
Q ss_pred HhhhhhccccCCCCCCCCCCccCCCcchHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCchhHHHHHHHhhhhhHH
Q 019299 247 WTHREFFEAQEDSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAE 326 (343)
Q Consensus 247 ~th~~~f~~~~~~~~~~~~~~~~~~~~~~~~i~~Lv~~~~~i~~~s~~lV~si~~i~~~~gis~~fiGlillpi~tnlpE 326 (343)
++||+. ++++. ++++.++++.+.+.|+.+.+++++.+++..+|++++++++.+++.+|+|+.++|++++|++||+||
T Consensus 144 ~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~~ts~PE 220 (307)
T TIGR00367 144 KVERQM--INDTY-TEEQLDENNRRKQIFFLIVLLIIGLTGLVVGSRLLVDGAVQIAEIFGISEKIIGLTLLAIGTSLPE 220 (307)
T ss_pred HHHHhc--ccccc-chhhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHH
Confidence 999841 11111 111111111123567788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcccC
Q 019299 327 HAGAIIFAFKNKLVSN 342 (343)
Q Consensus 327 ~~~AI~aA~kgk~dla 342 (343)
.++++.+++||+.|+|
T Consensus 221 ~~~~i~a~~~g~~~~a 236 (307)
T TIGR00367 221 LVVSVAAARKGLGDIA 236 (307)
T ss_pred HHHHHHHHHcCCCchH
Confidence 9999999999999986
No 8
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-33 Score=267.19 Aligned_cols=227 Identities=24% Similarity=0.270 Sum_probs=186.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCCCcceehhhhhhHHHHHHHH
Q 019299 88 EPWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLL 164 (343)
Q Consensus 88 ~~~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g~~~iv~g~ilGSil~Nlll 164 (343)
..+.|..+++.++.+|++++++++++++++| +.+.|++++++| |+||+.+++.|..+|+++++.||++|||++|+++
T Consensus 11 ~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g~~~iavGnvlGSni~ni~l 90 (320)
T COG0530 11 LILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNPDIAVGNVLGSNIFNILL 90 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcCCCCeeeehhhhHHHHHHHH
Confidence 4567889999999999999999999999999 677788777777 9999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHH
Q 019299 165 VLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVF 244 (343)
Q Consensus 165 vlG~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f 244 (343)
++|++.++.+.+. ++..+ +++.. .+++...+. .. + ..+++++|.++++++..|+.|+++
T Consensus 91 i~gl~ali~~~~~--~~~~~-~r~~~---f~ll~~~~~-~~---~-----------~~~~~~~~~~gi~ll~l~~~yl~~ 149 (320)
T COG0530 91 ILGLAALIAPLKV--DSDVL-RREIP---FLLLATLIL-LL---V-----------LLDGHLSRLDGIVLLLLYVLYLYY 149 (320)
T ss_pred HHHHHHHHhhhHh--hhhHH-HHhhH---HHHHHHHHH-HH---H-----------HHcCCccHHHHHHHHHHHHHHHHH
Confidence 9999999986642 22222 22222 222222222 21 1 145688999999999999999999
Q ss_pred HHHhhhhhccccCCCCCCCCCCccCC-CcchHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCchhHHHHHHHhhhh
Q 019299 245 QLWTHREFFEAQEDSEDDDDVTEETP-VIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGN 323 (343)
Q Consensus 245 ~l~th~~~f~~~~~~~~~~~~~~~~~-~~~~~~~i~~Lv~~~~~i~~~s~~lV~si~~i~~~~gis~~fiGlillpi~tn 323 (343)
.+|++|+.-++ + | +++|.| +.+..+.+++++++.+.+.+++|++|++++++++.+|+|+.++|++++|+|||
T Consensus 150 ~~~~~~~~~~~---~--~--~~~e~~~~~~~~~~~~~~~~~~~~l~~g~~llv~~~~~iA~~~gi~e~~igltivaigTS 222 (320)
T COG0530 150 LLKLSREAEEP---G--E--QENERPKKGSLRKALLVLVIGLILLVVGSELLVDGAVEIAEIFGISELIIGLTIVAIGTS 222 (320)
T ss_pred HHHhhhhcccc---c--c--ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcc
Confidence 99988763111 0 1 122333 55778899999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCcccC
Q 019299 324 AAEHAGAIIFAFKNKLVSN 342 (343)
Q Consensus 324 lpE~~~AI~aA~kgk~dla 342 (343)
+||.++++.++|||+.|+|
T Consensus 223 lPElv~si~a~rkg~~~ia 241 (320)
T COG0530 223 LPELVVSIVAARKGEDDIA 241 (320)
T ss_pred cHHHHHHHHHHHcCCCCeE
Confidence 9999999999999999987
No 9
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.89 E-value=6.7e-22 Score=206.21 Aligned_cols=129 Identities=19% Similarity=0.194 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHHHHHHHhhccc
Q 019299 99 LTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGI 175 (343)
Q Consensus 99 ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g~~~iv~g~ilGSil~NlllvlG~~~l~gg~ 175 (343)
.+.++++|+.+.+.||+++| +.+.|+++.++| |+||++++++|...++.++++||++||++||+++|+|+|.++.+.
T Consensus 472 aIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSLiAv~~g~sDIGVGNIVGSnIFNILLVLGl~aLis~~ 551 (1096)
T TIGR00927 472 AIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSRE 551 (1096)
T ss_pred HHHHHHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHHHHHHcCCCcceehhhHhHHHHHHHHHHhhheeeccc
Confidence 55677999999999999999 788888888888 999999999999999999999999999999999999999987642
Q ss_pred ccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHHHH
Q 019299 176 ANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQL 246 (343)
Q Consensus 176 ~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~l 246 (343)
. +..+...-.++. ..+++++..+++ +. .+..++++.+++|+++|++|++++.
T Consensus 552 ~-l~Ld~~~L~RDl----lFyILAv~lLil---f~-----------lDG~Itr~EgIILLlLYiiYVvvm~ 603 (1096)
T TIGR00927 552 I-LNLTWWPLFRDV----SFYILDLMMLIL---FF-----------LDSLIAWWESLLLLLAYALYVFTMK 603 (1096)
T ss_pred c-ccccccceehhH----HHHHHHHHHHHH---HH-----------hCCeEcHHHHHHHHHHHHHHHHHHH
Confidence 1 111111111222 222333322221 11 3357899999999999999987554
No 10
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.85 E-value=1.8e-21 Score=189.11 Aligned_cols=123 Identities=20% Similarity=0.262 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHHhC---cchhhhHHhhhcchhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHHHHHHHhhcccc
Q 019299 100 TPLAERVSFLTEQIAFYTG---PTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIA 176 (343)
Q Consensus 100 i~la~~l~~~~e~lA~~~G---~~vggll~a~~gslpElivsi~Al~~g~~~iv~g~ilGSil~NlllvlG~~~l~gg~~ 176 (343)
+.+-++++-+-+.|.+++| +..|+..+|+-||+||++++++...--+.++++|+|+||..||+|.|+|.|.++.+-
T Consensus 73 IVCDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIGVFIt~~dVGiGTIVGSAvFNIL~Vig~C~LFSrq- 151 (588)
T KOG1307|consen 73 IVCDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIGVFITQGDVGIGTIVGSAVFNILCVIGVCGLFSRQ- 151 (588)
T ss_pred HHhcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhheeEEEecCCcceeeeeehhhhhHHHHHHHHHhhccc-
Confidence 3456778888889999999 567777788888999999999999999999999999999999999999999998631
Q ss_pred cccccccchh----hhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHHH
Q 019299 177 NLRKEQKYDR----KQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQ 245 (343)
Q Consensus 177 ~~~~~~~~~~----~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~ 245 (343)
.....+ |+.. ...++++.+++ |. .+-.+.++++++|+.+|+.|.+|+
T Consensus 152 ----vl~LtWWPLfRD~s----fY~lsl~~Li~---Ff-----------~D~~I~WwEaL~L~~~Yi~Yv~~M 202 (588)
T KOG1307|consen 152 ----VLNLTWWPLFRDVS----FYTLSLIMLIY---FF-----------LDELIMWWEALALLLMYISYVVFM 202 (588)
T ss_pred ----ccccccchhhhhhH----HHHHHHHHHHH---HH-----------HhhHHHHHHHHHHHHHHHHHheee
Confidence 111111 2222 22334433332 21 344789999999999999998763
No 11
>PLN03151 cation/calcium exchanger; Provisional
Probab=99.75 E-value=2.6e-16 Score=163.45 Aligned_cols=131 Identities=18% Similarity=0.239 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhC-CCcceehhhhhhHHHHHHHHHHHHHHhh
Q 019299 97 LGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYG-RKIDVVKYSLLGSILSNLLLVLGTSLFC 172 (343)
Q Consensus 97 l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~-g~~~iv~g~ilGSil~NlllvlG~~~l~ 172 (343)
+.-.-++++++.+.+.+|++++ |.+.|+++.++| ++||+++++.|... ++.+++.|+++||++||++++.|++.++
T Consensus 153 ~L~~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~ig~ilGs~lf~~~vV~G~v~l~ 232 (650)
T PLN03151 153 LLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVGLNSVLGGAVFVTCVVVGIVSLC 232 (650)
T ss_pred HHHHHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCceeeehhhhHHHHHHHHHHHHHHHh
Confidence 3456789999999999999999 899999999999 99999999998664 7899999999999999999999999887
Q ss_pred cccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHHH
Q 019299 173 GGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQ 245 (343)
Q Consensus 173 gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~ 245 (343)
.+.++.+.+...-.|+.. .+++++..+.+ +. .+++++++++++++.+|++|+.+.
T Consensus 233 ~~~~pf~v~~~~f~RD~~----F~lla~~~l~~---~l-----------~~g~v~~~eai~ll~lY~~Yv~vv 287 (650)
T PLN03151 233 VADKEVQIDKRCFIRDLC----FFLFTLVSLLV---IL-----------MVGKVTVGGAIAFVSIYVVYAFLV 287 (650)
T ss_pred ccCCceeecchhHHHhHH----HHHHHHHHHHH---HH-----------HcCeEhHHHHHHHHHHHHHHHHHH
Confidence 533332233332333222 22333322221 11 346789999999999999998643
No 12
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.64 E-value=4e-15 Score=143.90 Aligned_cols=139 Identities=19% Similarity=0.294 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHHH
Q 019299 90 WVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVL 166 (343)
Q Consensus 90 ~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g~~~iv~g~ilGSil~Nlllvl 166 (343)
..+.+++++++.+++.++++++++|+.+| |.+.|+++.++| |+||+++++.|.++|+.+++.||++|||++|+++++
T Consensus 177 ~~l~~g~~~l~~gs~~lv~~~~~ia~~lgis~~~iG~tiva~gtslPE~~~sv~a~~~g~~~~avgniiGsnifni~~~l 256 (325)
T PRK10734 177 LWLGIALIIMPMATRMVIDNATVLANYFAISELTIGLTVIAIGTSLPELATAIAGARKGENDIAVGNIIGSNIFNIVIVL 256 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhccHHHHHHHHHHHHcCCCchHHHHHHhHHHHHHHHHH
Confidence 34566888999999999999999999999 777787777766 999999999999999999999999999999999999
Q ss_pred HHHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHHHH
Q 019299 167 GTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQL 246 (343)
Q Consensus 167 G~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~l 246 (343)
|.+.++.+..- ..+.+... . ..++.++++. ++..+ ..+.+++|++|++|+.+|+.|+...+
T Consensus 257 g~~~l~~~~~v--~~~~~~~~---~-~~~~~~~~~~--~~~~~-----------~~~~~i~r~~G~~Ll~~Y~~y~~~l~ 317 (325)
T PRK10734 257 GLPALISPGEI--NPLAFSRD---Y-WVMLLVSVIF--ALLCW-----------RRKRRIGRGAGALLLGGFIVWLAMLY 317 (325)
T ss_pred HHHHhhccccc--cchhHHHH---H-HHHHHHHHHH--HHHHH-----------HcCCccChHHHHHHHHHHHHHHHHHH
Confidence 99999864321 11222221 1 1233333222 11111 13457899999999999999998876
Q ss_pred H
Q 019299 247 W 247 (343)
Q Consensus 247 ~ 247 (343)
+
T Consensus 318 ~ 318 (325)
T PRK10734 318 W 318 (325)
T ss_pred h
Confidence 4
No 13
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.63 E-value=4.9e-15 Score=142.72 Aligned_cols=139 Identities=24% Similarity=0.330 Sum_probs=109.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHH
Q 019299 89 PWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLV 165 (343)
Q Consensus 89 ~~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g~~~iv~g~ilGSil~Nlllv 165 (343)
.+.|+++++.++.++++++++++++|+.+| |.+.|++..++| |+||+++++.+.++|+.|++.||++|||++|++++
T Consensus 177 ~~~~~~~~~~l~~g~~llv~~~~~iA~~~gi~e~~igltivaigTSlPElv~si~a~rkg~~~iavGnviGSni~n~~~~ 256 (320)
T COG0530 177 LLVLVIGLILLVVGSELLVDGAVEIAEIFGISELIIGLTIVAIGTSLPELVVSIVAARKGEDDIAVGNVIGSNIFNILIV 256 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCCCeEEeeecchHHHHHHHH
Confidence 578899999999999999999999999999 788888888888 99999999999999999999999999999999999
Q ss_pred HHHHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHHH
Q 019299 166 LGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQ 245 (343)
Q Consensus 166 lG~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~ 245 (343)
+|++.+++... ..++.+. .++. .|+..+++.++. +. ....++.|++|.++++.|+.|..+.
T Consensus 257 lGi~~~~~~~~--~~~~~~~-~~~~---vmi~~~l~l~l~---~~----------~~~~~i~r~~g~~ll~~Y~~~~~~~ 317 (320)
T COG0530 257 LGISALIGPIT--VEPSALL-VDAP---VLILVTLLLLLF---LA----------RRRRRIGRKEGLLLLGLYIVYVALL 317 (320)
T ss_pred HhHHHhccccc--cCchhHH-HHHH---HHHHHHHHHHHH---HH----------hccCcchhHHHHHHHHHHHHHHHHH
Confidence 99999987532 1222222 2121 233333222221 00 1456899999999999999998875
Q ss_pred H
Q 019299 246 L 246 (343)
Q Consensus 246 l 246 (343)
.
T Consensus 318 ~ 318 (320)
T COG0530 318 I 318 (320)
T ss_pred h
Confidence 4
No 14
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=99.59 E-value=1.3e-14 Score=142.55 Aligned_cols=137 Identities=18% Similarity=0.167 Sum_probs=105.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHH
Q 019299 89 PWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLV 165 (343)
Q Consensus 89 ~~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g~~~iv~g~ilGSil~Nlllv 165 (343)
...++++.+.++.+++.++++++.+++++| +.+.|+++.+++ |+||+.+++.|.++|+.|+++||++|||++|++++
T Consensus 223 i~~l~~~~~~l~~~a~~lv~~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si~aa~~g~~~lavg~~iGSni~n~l~v 302 (365)
T TIGR00846 223 AAWLVGATIVVALLAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIALGVALGSALQIALFV 302 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Confidence 345677888999999999999999999999 778888777777 99999999999999999999999999999999999
Q ss_pred HHHHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHH
Q 019299 166 LGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLV 243 (343)
Q Consensus 166 lG~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~ 243 (343)
+|++.+++...+......++.. + ..++.++++.+. ... .+++++|.+|++++.+|+.|..
T Consensus 303 l~~~~li~~~~~~~~~l~~~~~--~--~~~l~~s~~~~~--~~~------------~~~~~~~~eG~~ll~~Y~~~~~ 362 (365)
T TIGR00846 303 VPVVVLVAWMLGIPMDLNFGAP--E--TVALALSVFLTT--ITL------------QDGRSNYLEGAVLLALYIIIAM 362 (365)
T ss_pred HHHHHHHHHhcCCceeccCcHH--H--HHHHHHHHHHHH--HHH------------cCCcCcHHHHHHHHHHHHHHHH
Confidence 9999998744221122222221 1 123334433221 111 3467899999999999999976
No 15
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.58 E-value=1.2e-14 Score=122.84 Aligned_cols=136 Identities=32% Similarity=0.334 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC--cc-hhhhHHhhhcchhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHHHHHHHhhc
Q 019299 97 LGLTPLAERVSFLTEQIAFYTG--PT-VGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCG 173 (343)
Q Consensus 97 l~ii~la~~l~~~~e~lA~~~G--~~-vggll~a~~gslpElivsi~Al~~g~~~iv~g~ilGSil~NlllvlG~~~l~g 173 (343)
+++..+++++++..|.+++++| +. +|+++.+..+|+||+++++.+.++|+++++.|+++||+++|++++.|++.+++
T Consensus 1 i~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la~~~~~Gs~~~~~~l~~gl~~l~~ 80 (140)
T PF01699_consen 1 ILIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLAIGNIIGSNIFNITLIVGLILLFG 80 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHTHHHHHHHHS
T ss_pred CEehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchhhhcccchHHHHHHHHHHHHHHhc
Confidence 3688999999999999999888 44 55556666669999999999999999999999999999999999999999998
Q ss_pred ccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHH
Q 019299 174 GIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVF 244 (343)
Q Consensus 174 g~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f 244 (343)
..+. +++..+.........++.+..+.+.. +... ...+.+++++.+++++.+|++|+++
T Consensus 81 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~ll~~y~~y~~~ 139 (140)
T PF01699_consen 81 PIKL--GSQTIDWSSFTRDFSFLLLAILLLIL---FFLA-------FIRDGRISRFEGLVLLILYILYLVF 139 (140)
T ss_dssp -B-----------HHHHHHHHHHHHHHHHHHH---CCT----------HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred cccc--cccccccchHHHHHHHHHHHHHHHHH---HHHH-------HHcCCeEhHHHHHHHHHHHHHHHhc
Confidence 6652 22333333222222222222222111 1000 0135678999999999999999986
No 16
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.54 E-value=1e-14 Score=153.05 Aligned_cols=153 Identities=14% Similarity=0.203 Sum_probs=113.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHH
Q 019299 89 PWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLV 165 (343)
Q Consensus 89 ~~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g~~~iv~g~ilGSil~Nlllv 165 (343)
.+.|+.+++.|...++.+++.+..++..+| +.+-|+++.++| |+||++.++.+.++|..+++++|++|||+||+++.
T Consensus 935 ~ltFi~SIiwIsi~SyilV~~at~IG~vlGIse~VmGlTfLA~GTSIPDlisSvivArkG~gdMAVan~iGSNIFnIllg 1014 (1096)
T TIGR00927 935 VITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVG 1014 (1096)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhhhhhhhhhhcccHHHHHHHHHHHccCCcceeeeccccchheeeee
Confidence 467999999999999999999999999999 677777777777 99999999999999999999999999999999999
Q ss_pred HHHHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHHH
Q 019299 166 LGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQ 245 (343)
Q Consensus 166 lG~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~ 245 (343)
+|+.+++.-..+......++..... ++..+++.++++++-.+. ....++.|..|++++++|++|+.|.
T Consensus 1015 LGlPWlI~~li~g~~pV~V~S~GL~-~sI~LLF~~LlflissI~-----------l~kwrL~R~lGivlLvlYvvFLV~a 1082 (1096)
T TIGR00927 1015 LPVPWLLFSLINGLQPVPVSSNGLF-CAIVLLFLMLLFVISSIA-----------SCKWRMNKILGFTMFLLYFVFLIIS 1082 (1096)
T ss_pred ccHHHHHHHHhccCcceeecCccHH-HHHHHHHHHHHHHHHHHH-----------hcceEEechHHHHHHHHHHHHHHHH
Confidence 9999876533211122233333222 222222222222221111 1235789999999999999999998
Q ss_pred HHhhhhhc
Q 019299 246 LWTHREFF 253 (343)
Q Consensus 246 l~th~~~f 253 (343)
+--+.+.|
T Consensus 1083 iLiE~~ii 1090 (1096)
T TIGR00927 1083 VMLEDRII 1090 (1096)
T ss_pred HHHhcceE
Confidence 77665554
No 17
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.52 E-value=5.6e-15 Score=144.20 Aligned_cols=184 Identities=17% Similarity=0.160 Sum_probs=123.9
Q ss_pred cceeccchhhhHHHHHhhhHhhccchhHHHHHHHHHHHHHHhhc---CCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019299 42 TLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFG---FAE--PWVFALSLLGLTPLAERVSFLTEQIAFY 116 (343)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~p~~i~~~~~~---~~~--~~~F~l~~l~ii~la~~l~~~~e~lA~~ 116 (343)
.+.-.||...+|+. +|+.+..+.+|+++...... +.. ...|+.+.+.|...+++++.=+.++++.
T Consensus 384 pl~~~wP~~~~k~l----------~y~~~~Pi~fpLw~TvPdvrkp~~rkfF~vTFigSIlWIA~fSYLMVWwa~~iGeT 453 (588)
T KOG1307|consen 384 PLSFDWPETKRKRL----------TYAFLAPIVFPLWLTVPDVRKPRSRKFFPVTFIGSILWIAAFSYLMVWWANIIGET 453 (588)
T ss_pred CcCCCCccchhhee----------eeEEEeeeeeeEEEecCCcCCccccceeehHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 44556777766665 45555566677766655332 211 3345555555555555555555555555
Q ss_pred hC--cchhhhHHhhhc-chhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHHHHHHHhhccccccccc-ccchhhhcchH
Q 019299 117 TG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKE-QKYDRKQADVN 192 (343)
Q Consensus 117 ~G--~~vggll~a~~g-slpElivsi~Al~~g~~~iv~g~ilGSil~NlllvlG~~~l~gg~~~~~~~-~~~~~~~a~~~ 192 (343)
+| +-+-|+++.+.| |+|+++++++-++||..|++++|-+|||+|++++.||+.+++..+.+..+. .+.+.+..-..
T Consensus 454 ~gIp~eIMGLTiLAAGTSIPDlitSvIVARKGlGDMAVSsSiGSNiFDI~VGLplPWLL~~lI~~~~~~i~vsS~GL~cs 533 (588)
T KOG1307|consen 454 LGIPDEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNIFDILVGLPLPWLLYTLIYGFKSKISVSSNGLVCS 533 (588)
T ss_pred cCCCHHHhhhhhhhcCCchHHhhHhhhhcccccccceeecccccchhheeecCCcHHHHHHHHhhcCCceeecCCceehH
Confidence 55 346688877777 999999999999999999999999999999999999999988765431122 33444443333
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHHHHH
Q 019299 193 SLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLW 247 (343)
Q Consensus 193 ~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~l~ 247 (343)
..||++.++.+++-.+. ...++.+..|+.|+++|++|+.+..-
T Consensus 534 i~lLf~ml~v~v~~ia~------------~rWrMnK~lG~~m~llY~~Fl~~svm 576 (588)
T KOG1307|consen 534 IGLLFAMLIVLVLGIAL------------SRWRMNKILGFLMILLYFVFLIISVM 576 (588)
T ss_pred HHHHHHHHHHHHHHHHH------------HhhhcccchhHHHHHHHHHHHHhhhh
Confidence 35555555554443222 33578899999999999999998764
No 18
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.51 E-value=1.5e-13 Score=132.15 Aligned_cols=133 Identities=24% Similarity=0.312 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHH
Q 019299 89 PWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLV 165 (343)
Q Consensus 89 ~~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g~~~iv~g~ilGSil~Nlllv 165 (343)
.+.+.++++.+..+++.+++.++.+++.+| +.+.|+++.++| |+||+++++.+.++|+.+++.||++|||++|++++
T Consensus 172 ~~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~~ts~PE~~~~i~a~~~g~~~~avg~~iGs~i~~~~~~ 251 (307)
T TIGR00367 172 IVLLIIGLTGLVVGSRLLVDGAVQIAEIFGISEKIIGLTLLAIGTSLPELVVSVAAARKGLGDIAVGNVIGSNIFNILVG 251 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCCchHHHHHhhhHHHHHHHH
Confidence 467888999999999999999999999999 678888777777 99999999999999999999999999999999999
Q ss_pred HHHHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHH
Q 019299 166 LGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAY 241 (343)
Q Consensus 166 lG~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~y 241 (343)
+|++.++++... +.+.+.+. . . .++..+++..+. +. .+.+++|++|++|+.+|+.|
T Consensus 252 ~g~~~~~~~~~~--~~~~~~~~-~--~-~~~~~~~~~~~~---~~-----------~~~~i~~~~g~~l~~~Y~~y 307 (307)
T TIGR00367 252 LGVPSLFYPIPV--EPLAYSLD-A--P-VMVIVTLVLMLV---FK-----------TSMKLGRWEGFLLLALYIAY 307 (307)
T ss_pred HHHHHHhccccc--chhHHHHH-H--H-HHHHHHHHHHHH---HH-----------hcCeehHHHHHHHHHHHHhC
Confidence 999999975421 12222221 1 1 222222222111 11 34578999999999999886
No 19
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=99.38 E-value=4.9e-12 Score=123.67 Aligned_cols=135 Identities=16% Similarity=0.149 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHHHH
Q 019299 91 VFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLG 167 (343)
Q Consensus 91 ~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g~~~iv~g~ilGSil~NlllvlG 167 (343)
.++.+.+.+..+++.++++.+.+++.+| +.+.|+++..++ |+||+++++.+.++|+.|++.||++|||++|.+++.+
T Consensus 209 ~L~~~~v~i~~~a~~lv~~~~~~~~~~gi~~~~igl~iva~~tslpE~~~ai~aa~~~~~~~ai~~~~GS~i~~~l~v~p 288 (349)
T TIGR00378 209 VLLGTTVIVAFCSEFLVGTIDNVVESTGLSKLFIGVIVIPIVGNAAEHATAVLVAMKDKMDLALGVAIGSSLQIALFVAP 288 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcccHHHHHHhHHHHHHHHHHH
Confidence 4567888999999999999999999999 788888876666 9999999999999999999999999999999999888
Q ss_pred HHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHH
Q 019299 168 TSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLV 243 (343)
Q Consensus 168 ~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~ 243 (343)
...+++-..+......|+..+ ..++.++++.... . ..+++.+|.+|.+++..|+++-.
T Consensus 289 ~lvl~~~~~~~~~~L~f~~~~----~~~l~~~v~~~~~---~-----------~~dg~~n~leG~~ll~~Y~i~~~ 346 (349)
T TIGR00378 289 VLVIVGWMIDVPMTLNFSTFE----LVALFIAVLLSNY---I-----------SLDGESNWLEGVMLLAMYIIIAM 346 (349)
T ss_pred HHHHHHHHhCCCceecCcHHH----HHHHHHHHHHHHH---H-----------HhCCCCcHHHHHHHHHHHHHHHH
Confidence 877766332211222333221 1233333322211 1 14567899999999999998754
No 20
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=99.35 E-value=6.9e-12 Score=133.45 Aligned_cols=89 Identities=18% Similarity=0.176 Sum_probs=81.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCCC-cceehhhhhhHHHHHHH
Q 019299 88 EPWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRK-IDVVKYSLLGSILSNLL 163 (343)
Q Consensus 88 ~~~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g~-~~iv~g~ilGSil~Nll 163 (343)
....|+++.+.|..+...+++.+..+|..+| +.+.|+++.++| |+||++++++|+++|+ .++++||++|||++|++
T Consensus 755 g~~~f~~sI~~Ig~l~~~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~~~~~~d~aigNv~GSNifNi~ 834 (928)
T TIGR00845 755 GWACFVVSILMIGVLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVF 834 (928)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHHcCCCCceeEEeecchHHHHHH
Confidence 3578899999999999999999999999999 789999888888 9999999999999976 99999999999999999
Q ss_pred HHHHHHHhhcccc
Q 019299 164 LVLGTSLFCGGIA 176 (343)
Q Consensus 164 lvlG~~~l~gg~~ 176 (343)
+++|++.++.++.
T Consensus 835 l~lGv~~~i~~~~ 847 (928)
T TIGR00845 835 LGIGVAWSIAAIY 847 (928)
T ss_pred HHHHHHHHHhhhh
Confidence 9999999988653
No 21
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=98.72 E-value=2.1e-07 Score=90.99 Aligned_cols=137 Identities=13% Similarity=0.113 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhcchhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHHHHH
Q 019299 91 VFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGT 168 (343)
Q Consensus 91 ~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~gslpElivsi~Al~~g~~~iv~g~ilGSil~NlllvlG~ 168 (343)
..+.+.++++.+|+.++...|...+.+| +.++|++++..+|+||-+.++.|.++|+.|.+.+-.+||.+.-++++...
T Consensus 226 ~L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvIIaiv~~apE~~tAV~aA~kNkmq~slnialGSsLq~illtvP~ 305 (366)
T PRK10599 226 WLIIHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPV 305 (366)
T ss_pred HHHHHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHHHHHHcchhHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 4456777889999999999999999999 67888999999999999999999999999999999999999888887777
Q ss_pred HHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHHH
Q 019299 169 SLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQ 245 (343)
Q Consensus 169 ~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~ 245 (343)
..++|-.-.......|+.. ...++.++++.-.+ .-.+++-++.+|..++.+|..|++..
T Consensus 306 lvlig~~~g~pm~L~f~~~----e~vlL~ltv~v~~~--------------t~~dGrsN~LeG~~hL~lf~~y~~l~ 364 (366)
T PRK10599 306 VTLIAFLTGNELQFGLGAP----EMVVMVASLVLCHI--------------SFSTGRTNVLNGAAHLALFAAYLMTI 364 (366)
T ss_pred HHHHHHHhCCCeEecCCHH----HHHHHHHHHHHHHh--------------ccCCCchHHHHHHHHHHHHHHHHHHH
Confidence 7766633211122223322 11233333322111 01456778999999999999999865
No 22
>PLN03151 cation/calcium exchanger; Provisional
Probab=98.67 E-value=8.1e-07 Score=93.09 Aligned_cols=166 Identities=15% Similarity=0.212 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHhhc----CCh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHH
Q 019299 71 LFPAIPLAIIGQCFG----FAE-------PWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELI 136 (343)
Q Consensus 71 ll~~~p~~i~~~~~~----~~~-------~~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpEli 136 (343)
+++.+|++++..... +++ ..-|+.+.+.|...|.-++...+.++..+| +.+-|++.-+.| |+++++
T Consensus 457 ~~ig~~Lai~vf~~tr~d~PP~~~~~~~~~~~f~~Si~wi~~~a~elv~~l~~iG~i~~is~~~lglTvlA~gnsi~Dli 536 (650)
T PLN03151 457 VAIGSTLGFLAYKYTEPDRPPRRFLIPWVLGGFIMSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLM 536 (650)
T ss_pred HHHHHHHHHHHHHHcCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccHHHHH
Confidence 446677777754421 111 125666777777888888888888888888 677777777777 999999
Q ss_pred HHHHHhhCCCc--ceehhhhhhHHHHHHHHHHHHHHhhcccccccccccchhh-hcch-HHHHHHHHHHHHHHHHHHHhh
Q 019299 137 IAIFALYGRKI--DVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRK-QADV-NSLLLLLALLCHMLPLLFKYA 212 (343)
Q Consensus 137 vsi~Al~~g~~--~iv~g~ilGSil~NlllvlG~~~l~gg~~~~~~~~~~~~~-~a~~-~~~ll~la~l~l~lP~~~~~~ 212 (343)
..+.-+++|.+ .++.++.+|+++||+++.+|+++++...+. +...+... +... .+...++..+...+ +..
T Consensus 537 an~~lA~~G~~~m~mA~~a~~ggp~F~il~glG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~~~L~~~l---i~~- 610 (650)
T PLN03151 537 SNVALAMNGGDGVQIAMSGCYAGPMFNTLVGLGMSMLLGAWSK--SPESYMLPEDSSLFYTMGFLVSGLIWAL---VVL- 610 (650)
T ss_pred HHHHHHHcCCchhHHHHHHhhhhhHHHHHHhccHHHHHHHhhc--CCCceeecCCChHHHHHHHHHHHHHHHH---HHH-
Confidence 99999999975 578889999999999999999999874421 22222111 1111 11111111111111 100
Q ss_pred hcccchhhhccccchhHhHHHHHHHHHHHHHHHHHhh
Q 019299 213 AASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWTH 249 (343)
Q Consensus 213 ~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~l~th 249 (343)
.....++.|..|+.++.+|++|+.+.+-+.
T Consensus 611 -------~~~~f~~~R~~G~~li~~Y~~Fl~~~~~~~ 640 (650)
T PLN03151 611 -------PRNDMRPNKTLGVGLIALYLIFLTFRVSTA 640 (650)
T ss_pred -------HHhCeeechhHHHHHHHHHHHHHHHHHHHH
Confidence 014468899999999999999999987543
No 23
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=98.57 E-value=3e-08 Score=83.59 Aligned_cols=57 Identities=30% Similarity=0.341 Sum_probs=52.4
Q ss_pred HHHHHhHHHHHHHHHHHHhhcCCCchhHHHHHHHhhhhhHHHHHHHHHHHhcCcccC
Q 019299 286 AIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLVSN 342 (343)
Q Consensus 286 ~~i~~~s~~lV~si~~i~~~~gis~~fiGlillpi~tnlpE~~~AI~aA~kgk~dla 342 (343)
+++..+|+++++++|.+++.+|+|+.++|.+++|++||+||.++++.++++|+.|+|
T Consensus 1 i~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la 57 (140)
T PF01699_consen 1 ILIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLA 57 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHH
T ss_pred CEehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchh
Confidence 367899999999999999999999999999999999999999999999999998875
No 24
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=98.43 E-value=2.4e-06 Score=88.44 Aligned_cols=227 Identities=19% Similarity=0.195 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCC-CcceehhhhhhHHHHHHHHHHHHHHh
Q 019299 96 LLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGR-KIDVVKYSLLGSILSNLLLVLGTSLF 171 (343)
Q Consensus 96 ~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g-~~~iv~g~ilGSil~NlllvlG~~~l 171 (343)
.+...-..++++-+.+.++.++. |.+.|+++.++| .+|.++.++.|.... ++|++.++++|+-+|-..++.|.-.+
T Consensus 116 ~~l~~~a~~yFspsL~~is~~L~l~esvAGVTlLa~GNgapDvf~siasv~~~~~~~~~~~~~lg~alFVt~~V~G~i~~ 195 (605)
T KOG2399|consen 116 YLLGITADDYFSPSLSSISSLLRLSESVAGVTLLAFGNGAPDVFASIASVRGTPKGDLALNDLLGGALFVTTVVVGLIIL 195 (605)
T ss_pred HHHHHHHHHhcChHHHHHHHHhcCCCceeeEEEeeecCCCchHHhhhheeecCCCcccHHHHHhccceeEEeeEeeeeee
Confidence 34466778899999999999887 899999999999 999999999997653 45799999999999999999999887
Q ss_pred hcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHH-------
Q 019299 172 CGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVF------- 244 (343)
Q Consensus 172 ~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f------- 244 (343)
..+.| .+..-..| +.. .++.+...+.+ +.. ...++..+.++..+..|..|..+
T Consensus 196 t~pFk---i~~~~~iR--Di~--Fll~al~~l~~---~~~----------~~~~v~~~~~l~fl~~y~~Yv~~vi~~~~~ 255 (605)
T KOG2399|consen 196 TKPFK---INANSFIR--DIL--FLLLALLFLAF---ILL----------RGNKVEIWMALTFLGIYVVYVVTVIVLLSA 255 (605)
T ss_pred eccee---eccchhHH--HHH--HHHHHHHHHHH---HHh----------cCCceeHHhHHHHhHHHHHHHHHHHHHHHH
Confidence 76432 22222222 211 12222222111 111 11267788999999999888763
Q ss_pred HHHhhhh---------------hcccc---C--CCCCCC----------C------------------------------
Q 019299 245 QLWTHRE---------------FFEAQ---E--DSEDDD----------D------------------------------ 264 (343)
Q Consensus 245 ~l~th~~---------------~f~~~---~--~~~~~~----------~------------------------------ 264 (343)
.++.+++ .++.. + ++++|+ .
T Consensus 256 ~i~~~~r~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 335 (605)
T KOG2399|consen 256 RIRKDRRKRFLELTPLRDMEESLFEALSVEPSIEEDEEELLRETHTHRFSGHDQMSNRAWTRIEIIYANNRNQDLFSDFF 335 (605)
T ss_pred HHHHHhhcchhccCCCcccchhhhcccccCCccccccchhhhhcCCCcccchhhhhhhhHHHHhhcccccchHHHHHHHH
Confidence 3333332 22210 0 000000 0
Q ss_pred ------CC-c------------------------------c-CCCcc---------------------------------
Q 019299 265 ------VT-E------------------------------E-TPVIG--------------------------------- 273 (343)
Q Consensus 265 ------~~-~------------------------------~-~~~~~--------------------------------- 273 (343)
++ + + +..|+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~kv~~~i~~p~~l~~~LtIP~v~~~~~Wsk~l~~~~~~~~P~~l~~~i~~~~~~~~~~~~~~ 415 (605)
T KOG2399|consen 336 RHLRPWDSDEEFYEMNILTKVLLIIKIPLVLLLRLTIPVVDSELSWSKPLNLLQVVLAPLLLLFLIQSLLYSISQGSPGL 415 (605)
T ss_pred hccCCCCchhhhhhhhHHHHHHHHHhhhHhhhheeeecccCccccHHHHHHHHHHHHHHHHHHHHHHHhccccccccchH
Confidence 00 0 0 00000
Q ss_pred -----------------------------hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCchhHHHHHHHhhhhh
Q 019299 274 -----------------------------FWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNA 324 (343)
Q Consensus 274 -----------------------------~~~~i~~Lv~~~~~i~~~s~~lV~si~~i~~~~gis~~fiGlillpi~tnl 324 (343)
......-++.+.+++..+|.=+|.-++.+..-+|+|+++.|+|+++.+.|.
T Consensus 416 ~~~~l~is~~la~l~~~~t~~~~ppk~~~~v~~~~gF~mSi~wI~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSi 495 (605)
T KOG2399|consen 416 YLISLIISIPLAILAFFFTRLDKPPKFYHWVFSALGFLMSIAWIYLIANELVAVLTMLGVIFGLSPSILGLTVLAWGNSI 495 (605)
T ss_pred HHHHHHHHHHHHHHHHHhCcccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccH
Confidence 000124467788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCcccC
Q 019299 325 AEHAGAIIFAFKNKLVSN 342 (343)
Q Consensus 325 pE~~~AI~aA~kgk~dla 342 (343)
-+.++=+..|++|..+||
T Consensus 496 GDLIAniavak~G~p~MA 513 (605)
T KOG2399|consen 496 GDLIANIAVAKQGYPRMA 513 (605)
T ss_pred HHHHHHHHHHHcCcHHHH
Confidence 999999999999998776
No 25
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=98.36 E-value=1.4e-06 Score=93.42 Aligned_cols=77 Identities=22% Similarity=0.363 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH--------------------hCcchhhhHHhhhc-chhHHHHHHHHhhCCC---cceehh
Q 019299 97 LGLTPLAERVSFLTEQIAFY--------------------TGPTVGGLLNATCG-NATELIIAIFALYGRK---IDVVKY 152 (343)
Q Consensus 97 l~ii~la~~l~~~~e~lA~~--------------------~G~~vggll~a~~g-slpElivsi~Al~~g~---~~iv~g 152 (343)
+++-.-++.+..+.|.|..+ ..+++.|+++.++| |+||++.++++...++ .+++.|
T Consensus 87 ~~~~i~ad~f~~sie~i~~~~~~v~~~~~~ge~~~~~~ri~~~tvag~t~~A~gssaPe~~~s~~~~~~~~~~~g~lg~g 166 (928)
T TIGR00845 87 LGVSIIADRFMASIEVITSQEKEITIKKPNGETTVTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFEAGDLGPS 166 (928)
T ss_pred HHHHHHHHHHHHHHHHHhhccceeeeecCCCcceeeEeeeCCcccccceeeeccCCchHHHHHHHHHhccCCcccccccc
Confidence 33444445555788888875 46789999999999 9999999999988765 499999
Q ss_pred hhhhHHHHHHHHHHHHHHhhc
Q 019299 153 SLLGSILSNLLLVLGTSLFCG 173 (343)
Q Consensus 153 ~ilGSil~NlllvlG~~~l~g 173 (343)
+++||.+||++.|.|+|.+.-
T Consensus 167 tivGsa~Fn~~vi~~~~~~~~ 187 (928)
T TIGR00845 167 TIVGSAAFNMFIIIAICVYVI 187 (928)
T ss_pred ceehhHHHHHHhhheeEEEec
Confidence 999999999999999999863
No 26
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=98.17 E-value=3.2e-05 Score=75.27 Aligned_cols=138 Identities=20% Similarity=0.224 Sum_probs=97.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhh-hcchhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHH
Q 019299 89 PWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNAT-CGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLV 165 (343)
Q Consensus 89 ~~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~-~gslpElivsi~Al~~g~~~iv~g~ilGSil~Nlllv 165 (343)
..+...+.+.+...++.++...|+..+.+| +.+-|+++++ .||.||.+.++.+.++|+.+.+.+-..||.+.-.++.
T Consensus 223 ~~vLl~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~~~mqls~nia~Gsalq~~llt 302 (368)
T COG0387 223 TGVLLIATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALNNRMQLSMNIAMGSALQTALLT 302 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 456777888899999999999999999999 5566665555 5599999999999999999999999999987777665
Q ss_pred HHHHHhhcccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHHH
Q 019299 166 LGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVF 244 (343)
Q Consensus 166 lG~~~l~gg~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f 244 (343)
..+-.+++-+ ..|+++..-......+++.+++..-+ . ..+++-++..|.+++.+|..|..-
T Consensus 303 iP~lvlis~~----~gqpm~l~~~~~elV~l~~~v~~~~~---~-----------~sdG~sn~leG~~lL~lya~~~~~ 363 (368)
T COG0387 303 IPVLVLISLF----TGQPLTLGFGPPELVLLVVTVFLANI---L-----------FSDGRTNWLEGVVLLALYAIYAML 363 (368)
T ss_pred HHHHHHHHHH----hCCCccccCCHHHHHHHHHHHHHHHH---h-----------cCCCchHHHHHHHHHHHHHHHHHH
Confidence 5444444311 12233222112222334333322111 1 156778899999999999999763
No 27
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=98.13 E-value=8.7e-05 Score=77.08 Aligned_cols=163 Identities=24% Similarity=0.329 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHhhcC---Ch--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHH
Q 019299 71 LFPAIPLAIIGQCFGF---AE--------PWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELI 136 (343)
Q Consensus 71 ll~~~p~~i~~~~~~~---~~--------~~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpEli 136 (343)
+.+..|+++++.+..- +| ..-|..+.+.|...|.-++.-.+.++..+| |.+=|++.-+.| |+=.++
T Consensus 420 l~is~~la~l~~~~t~~~~ppk~~~~v~~~~gF~mSi~wI~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSiGDLI 499 (605)
T KOG2399|consen 420 LIISIPLAILAFFFTRLDKPPKFYHWVFSALGFLMSIAWIYLIANELVAVLTMLGVIFGLSPSILGLTVLAWGNSIGDLI 499 (605)
T ss_pred HHHHHHHHHHHHHhCcccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccHHHHH
Confidence 5556677777666432 11 233455566666777777888888888888 677677666666 999999
Q ss_pred HHHHHhhCCCcceehhhhhhHHHHHHHHHHHHHHhhcccccccccccchhhh--cchHHHHHHHHHHHHHHHHHHHhhhc
Q 019299 137 IAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRKQ--ADVNSLLLLLALLCHMLPLLFKYAAA 214 (343)
Q Consensus 137 vsi~Al~~g~~~iv~g~ilGSil~NlllvlG~~~l~gg~~~~~~~~~~~~~~--a~~~~~ll~la~l~l~lP~~~~~~~~ 214 (343)
..+.-+++|.++||.+..+|+.+||++.-+|+++....... +..+.+...+ .......+.++.+..++ ...
T Consensus 500 Aniavak~G~p~MAmaac~GGplfn~lvg~G~~~~i~~~~~-~~~~~~~~~~~~l~~~~~fL~i~l~~slv---~~~--- 572 (605)
T KOG2399|consen 500 ANIAVAKQGYPRMAMAACIGGPLFNLLVGLGLPLVISSLQG-KPGNIVIPEDNSLRITLIFLLIGLLTSLV---LIP--- 572 (605)
T ss_pred HHHHHHHcCcHHHHHHHHhhhHHHHHHHHhhHHHHHHHHhc-CCCceecccCCceehhHHHHHHHHHHHHH---HHh---
Confidence 99999999999999999999999999999999998874432 1111111110 11111222222222111 110
Q ss_pred ccchhhhccccchhHhHHHHHHHHHHH-HHHHH
Q 019299 215 SSDITAKATLQLSRASSIVMLIGYFAY-LVFQL 246 (343)
Q Consensus 215 ~~~~~~~~~~~lsr~~siiLl~~Y~~y-l~f~l 246 (343)
....++.|..|+.|+.+|++| +++.+
T Consensus 573 ------~~~f~~~r~~gi~L~~lyi~f~~~~~l 599 (605)
T KOG2399|consen 573 ------TNRFRLRRVLGIGLLSLYIAFTLIFIL 599 (605)
T ss_pred ------cccceeccchhhHHHHHHHHHHHHHHH
Confidence 145678899999999999999 55443
No 28
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.05 E-value=1.6e-06 Score=86.24 Aligned_cols=102 Identities=15% Similarity=0.132 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhhHHhhhc-chhHHHHHHHHhhCCC-cceehhhhhhHHHHHHHH
Q 019299 89 PWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRK-IDVVKYSLLGSILSNLLL 164 (343)
Q Consensus 89 ~~~F~l~~l~ii~la~~l~~~~e~lA~~~G--~~vggll~a~~g-slpElivsi~Al~~g~-~~iv~g~ilGSil~Nlll 164 (343)
...|+.+++.|-.+...+++.+...+...| +.+-+++..++| |+|+.+.+-+|+.+++ .|-.+||+-|||-.|..+
T Consensus 428 w~cFvvsi~~Igl~ta~igd~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~d~~AD~~igNvTgSNaVNvfl 507 (596)
T KOG1306|consen 428 WACFVVSILFIGLLTAVIGDLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQDQTADASIGNVTGSNAVNVFL 507 (596)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhhcccccccccceecccceeEEE
Confidence 467999999999999999999988888888 789999999999 9999999988877655 899999999999999999
Q ss_pred HHHHHHhhcccccccccccchhhhcc
Q 019299 165 VLGTSLFCGGIANLRKEQKYDRKQAD 190 (343)
Q Consensus 165 vlG~~~l~gg~~~~~~~~~~~~~~a~ 190 (343)
.+|+++.+....+-.+.++|......
T Consensus 508 GiG~aW~iaavy~a~~g~~f~v~~g~ 533 (596)
T KOG1306|consen 508 GIGLAWSIAAVYWAAQGEPFYVEAGT 533 (596)
T ss_pred eccHHHHHHHHHHHhcCceEEeccce
Confidence 99999988765433344455544333
No 29
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=97.22 E-value=0.0015 Score=63.87 Aligned_cols=129 Identities=20% Similarity=0.179 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC---cchhhhHHhhhcchhHHHHHHHHhhCCCcceehhhhhhHHHHHHHHHHHHHHhhc
Q 019299 97 LGLTPLAERVSFLTEQIAFYTG---PTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCG 173 (343)
Q Consensus 97 l~ii~la~~l~~~~e~lA~~~G---~~vggll~a~~gslpElivsi~Al~~g~~~iv~g~ilGSil~NlllvlG~~~l~g 173 (343)
+.+-.+|+++++..|+..+..| .++|-.+++..||+.|-..+|+=..+|+.|+..|-.+||.+=-.+++...+.+.+
T Consensus 300 ~~vsllaeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k~kldLslgVaigsalQI~Lf~vP~~v~v~ 379 (441)
T KOG1397|consen 300 LLVSLLAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMKDKLDLSLGVAIGSALQIALFVVPFSVIVG 379 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhcceeeeecCcccchhhhhhhhhHhHHHhhhhHHHHhh
Confidence 3455779999999999999999 3566667888999999999999999999999999999998877788888888877
Q ss_pred ccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhcccchhhhccccchhHhHHHHHHHHHHHHH
Q 019299 174 GIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLV 243 (343)
Q Consensus 174 g~~~~~~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~ 243 (343)
-.- .++-..|-.... ...++++++.. +.+. .++.=++..|.+|++.|++-..
T Consensus 380 W~~--g~~M~LnF~~~e--t~~l~isVfl~---~y~l-----------qdG~Sny~kG~mLll~Y~Iia~ 431 (441)
T KOG1397|consen 380 WIM--GISMDLNFPLLE--TACLFISVFLV---AYLL-----------QDGKSNYFKGLMLLLCYLIIAA 431 (441)
T ss_pred hhc--CCceEEeccHHH--HHHHHHHHHHH---HHHH-----------hcCchhHHHHHHHHHHHHHHHH
Confidence 432 222222222112 13444444321 1121 3455578899999999976543
No 30
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=87.84 E-value=0.44 Score=48.43 Aligned_cols=62 Identities=15% Similarity=0.174 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCchhHHHHHHHhhhhhHHHHHHHHHHHhcCc
Q 019299 278 FAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKL 339 (343)
Q Consensus 278 i~~Lv~~~~~i~~~s~~lV~si~~i~~~~gis~~fiGlillpi~tnlpE~~~AI~aA~kgk~ 339 (343)
..-++++++.|.+..-++-+-.+-+.-..|+.++...++++++|||.|+...+=++|.++..
T Consensus 428 w~cFvvsi~~Igl~ta~igd~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~d~~ 489 (596)
T KOG1306|consen 428 WACFVVSILFIGLLTAVIGDLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQDQT 489 (596)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhhccc
Confidence 34577888888888888888888888889999999999999999999999999999988764
No 31
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=40.53 E-value=1.3e+02 Score=24.81 Aligned_cols=22 Identities=14% Similarity=0.042 Sum_probs=17.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 019299 88 EPWVFALSLLGLTPLAERVSFL 109 (343)
Q Consensus 88 ~~~~F~l~~l~ii~la~~l~~~ 109 (343)
...+++++++..+|+.+.+..+
T Consensus 76 ~~~llilG~L~fIPG~Y~~~i~ 97 (115)
T PF05915_consen 76 GWALLILGILCFIPGFYHTRIA 97 (115)
T ss_pred cchHHHHHHHHHhccHHHHHHH
Confidence 3667899999999999876543
No 32
>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate.
Probab=36.88 E-value=67 Score=30.21 Aligned_cols=50 Identities=18% Similarity=0.244 Sum_probs=42.4
Q ss_pred chHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCchhHHHHHHHhhh
Q 019299 273 GFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVG 322 (343)
Q Consensus 273 ~~~~~i~~Lv~~~~~i~~~s~~lV~si~~i~~~~gis~~fiGlillpi~t 322 (343)
...++++.+++++++++++.-..+.+.+..-+.-|+--.+++++++++..
T Consensus 194 aRkR~i~f~llgllfliiaigltvGT~~~A~~~~giY~~wv~~~l~a~~~ 243 (256)
T PF09788_consen 194 ARKRAIIFFLLGLLFLIIAIGLTVGTWTYAKTYGGIYVSWVGLFLIALIC 243 (256)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCcEeHHHHHHHHHHHHH
Confidence 34567888999999998888888888888777789999999999988764
No 33
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=31.84 E-value=3.3e+02 Score=23.27 Aligned_cols=26 Identities=15% Similarity=-0.102 Sum_probs=12.5
Q ss_pred ccccchhHhHHHHHHHHHHHHHHHHH
Q 019299 222 ATLQLSRASSIVMLIGYFAYLVFQLW 247 (343)
Q Consensus 222 ~~~~lsr~~siiLl~~Y~~yl~f~l~ 247 (343)
+.+......+..|-.+-..|+.+.-|
T Consensus 35 ~~Gt~aL~ls~~l~~mig~yl~~~~r 60 (137)
T PF12270_consen 35 WVGTVALVLSGGLALMIGFYLRFTAR 60 (137)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33433444444444455556665443
No 34
>PF11683 DUF3278: Protein of unknown function (DUF3278); InterPro: IPR021697 This bacterial family of proteins has no known function.
Probab=30.41 E-value=2.3e+02 Score=23.57 Aligned_cols=10 Identities=20% Similarity=0.371 Sum_probs=4.5
Q ss_pred HHHHHHHHHH
Q 019299 238 YFAYLVFQLW 247 (343)
Q Consensus 238 Y~~yl~f~l~ 247 (343)
+..|+.++.+
T Consensus 78 ~~~yi~~~~~ 87 (129)
T PF11683_consen 78 VSGYITFATR 87 (129)
T ss_pred HHHHHHHHHH
Confidence 3445544443
No 35
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=29.65 E-value=1.3e+02 Score=27.80 Aligned_cols=7 Identities=0% Similarity=-0.325 Sum_probs=2.9
Q ss_pred HHHhhhh
Q 019299 245 QLWTHRE 251 (343)
Q Consensus 245 ~l~th~~ 251 (343)
..|.|+.
T Consensus 72 ~~k~~~~ 78 (248)
T PF11368_consen 72 SRKYKKL 78 (248)
T ss_pred HHHHHHH
Confidence 3344443
No 36
>PRK11281 hypothetical protein; Provisional
Probab=29.26 E-value=9.3e+02 Score=27.76 Aligned_cols=17 Identities=6% Similarity=-0.097 Sum_probs=8.7
Q ss_pred CCcceehhhhhhHHHHH
Q 019299 145 RKIDVVKYSLLGSILSN 161 (343)
Q Consensus 145 g~~~iv~g~ilGSil~N 161 (343)
..++=...+.+|-..+=
T Consensus 642 ~~~~~~~~d~lg~~~~i 658 (1113)
T PRK11281 642 LSPLGLADDVIGQAVII 658 (1113)
T ss_pred hCchhhhhhhHHHHHHH
Confidence 33444555666665443
No 37
>PF08370 PDR_assoc: Plant PDR ABC transporter associated; InterPro: IPR013581 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This domain is found on the C terminus of ABC-2 type transporter domains (IPR013525 from INTERPRO). It seems to be associated with the plant pleiotropic drug resistance (PDR) protein family of ABC transporters. Like in yeast, plant PDR ABC transporters may also play a role in the transport of antifungal agents [] (see also IPR010929 from INTERPRO). The PDR family is characterised by a configuration in which the ABC domain is nearer the N terminus of the protein than the transmembrane domain [].
Probab=28.35 E-value=61 Score=23.98 Aligned_cols=25 Identities=28% Similarity=0.331 Sum_probs=21.7
Q ss_pred cceehhhhhhH-HHHHHHHHHHHHHh
Q 019299 147 IDVVKYSLLGS-ILSNLLLVLGTSLF 171 (343)
Q Consensus 147 ~~iv~g~ilGS-il~NlllvlG~~~l 171 (343)
.=|.+|.++|. ++||++..+.+..+
T Consensus 29 yWIgvgaL~G~~vlFNil~~laL~yL 54 (65)
T PF08370_consen 29 YWIGVGALLGFIVLFNILFTLALTYL 54 (65)
T ss_pred EeehHHHHHHHHHHHHHHHHHHHHhc
Confidence 44889999998 88999999999986
No 38
>PF09622 DUF2391: Putative integral membrane protein (DUF2391); InterPro: IPR024464 Members of this protein family are found in archaea and bacteria. Their function is unknown.
Probab=27.90 E-value=5.3e+02 Score=24.50 Aligned_cols=23 Identities=13% Similarity=0.241 Sum_probs=16.9
Q ss_pred HHhhcCCCchhHHHHHHHhhhhh
Q 019299 302 ASNSWGISVSFISIILLPIVGNA 324 (343)
Q Consensus 302 i~~~~gis~~fiGlillpi~tnl 324 (343)
--+..|+++.|+..+++..+.++
T Consensus 202 ~~~~~g~~~~~l~~tivsY~isl 224 (267)
T PF09622_consen 202 REEQRGIFQRFLRFTIVSYLISL 224 (267)
T ss_pred hhhccCccchhHHHHHHHHHHHH
Confidence 44567899999998887766554
No 39
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=25.90 E-value=1.3e+02 Score=18.66 Aligned_cols=22 Identities=23% Similarity=0.555 Sum_probs=15.2
Q ss_pred chhHhHHHHHHHHHHHHHHHHH
Q 019299 226 LSRASSIVMLIGYFAYLVFQLW 247 (343)
Q Consensus 226 lsr~~siiLl~~Y~~yl~f~l~ 247 (343)
++...+.+++++-..|+.|.+-
T Consensus 3 ~~vi~g~llv~lLl~YLvYAL~ 24 (29)
T PRK14750 3 FSIVCGALLVLLLLGYLVYALF 24 (29)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 3556777777777777777653
No 40
>COG4146 Predicted symporter [General function prediction only]
Probab=24.82 E-value=94 Score=31.28 Aligned_cols=59 Identities=25% Similarity=0.338 Sum_probs=38.4
Q ss_pred ccccchhhhcchHHHHHHHHHHHHHHHHHHHhhhc--ccchhhhccccchhHhHHHHHHHH
Q 019299 180 KEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAA--SSDITAKATLQLSRASSIVMLIGY 238 (343)
Q Consensus 180 ~~~~~~~~~a~~~~~ll~la~l~l~lP~~~~~~~~--~~~~~~~~~~~lsr~~siiLl~~Y 238 (343)
-|++|+++.....+.+.+++-...++|++++...- +....-....++|++.++.++.+-
T Consensus 109 lE~RfD~~TR~Iis~lFLi~y~~~flPtvLYsGAla~nsiF~l~~v~~IS~g~~i~~~via 169 (571)
T COG4146 109 LEERFDKTTRMIISFLFLIAYGVCFLPTVLYSGALALNSIFHLGEVLQISHGAAIWLLVIA 169 (571)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHhhhhchHhhhCcCcchHHHHHHHH
Confidence 58899998777777777787777789998863310 000111245678888877665543
No 41
>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes. They are related to the human bile acid:sodium symporters, which are transmembrane proteins functioning in the liver in the uptake of bile acids from portal blood plasma, a process mediated by the co-transport of Na+ []. In yeast, overexpression of the ACR3 gene confers an arsenite- but not an arsenate-resistance phenotype [].; GO: 0008508 bile acid:sodium symporter activity, 0006814 sodium ion transport, 0016020 membrane; PDB: 3ZUX_A 3ZUY_A.
Probab=23.66 E-value=4.9e+02 Score=22.63 Aligned_cols=58 Identities=17% Similarity=0.317 Sum_probs=26.3
Q ss_pred cchhhhHHHHHhhhHhhccchhHH-HHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHH
Q 019299 47 IRFPCLRRCLANIQEVILGTKLSV-LFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAE 104 (343)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~l~~-ll~~~p~~i~~~~~~~~~~~~F~l~~l~ii~la~ 104 (343)
.+.+..++...+-|.++.+.-.|. +.|.+-.++....++.++.....+-+++..|++.
T Consensus 15 ~~~~~l~~~~~~p~~l~~~l~~~~~i~Plla~~l~~~~~~~~~~~~~Gl~l~~~~P~~~ 73 (187)
T PF01758_consen 15 LTFEDLRRVLRRPKLLLIGLLAQFLIMPLLAFGLAWLLLPLSPALALGLLLVAACPGGP 73 (187)
T ss_dssp --GGGGHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-HHTT--HHHHHHHHHHHHS-B-T
T ss_pred ccHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhcCCcHH
Confidence 334444454444555555543443 3444444444344555555555666667777775
No 42
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=23.39 E-value=74 Score=23.22 Aligned_cols=23 Identities=13% Similarity=0.251 Sum_probs=17.6
Q ss_pred HhHHHHHHHHHHHHHHHHHhhhh
Q 019299 229 ASSIVMLIGYFAYLVFQLWTHRE 251 (343)
Q Consensus 229 ~~siiLl~~Y~~yl~f~l~th~~ 251 (343)
+--+.+.+.|+++++|.+++|++
T Consensus 13 ~~t~~~~l~fiavi~~ayr~~~K 35 (60)
T COG4736 13 WGTIAFTLFFIAVIYFAYRPGKK 35 (60)
T ss_pred HHHHHHHHHHHHHHHHHhcccch
Confidence 34456777888899999998865
No 43
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=22.11 E-value=3.7e+02 Score=23.25 Aligned_cols=51 Identities=24% Similarity=0.094 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 019299 68 LSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTG 118 (343)
Q Consensus 68 l~~ll~~~p~~i~~~~~~~~~~~~F~l~~l~ii~la~~l~~~~e~lA~~~G 118 (343)
+..|+.++--++++.+++.+..+..+..+++...+=..+-..+..++++.-
T Consensus 83 i~PL~~l~v~~~La~~L~~~e~~~~~~~~lg~~l~fl~~r~ysRkl~~~~~ 133 (150)
T COG3086 83 IFPLVGLFLGAILAQYLFFSELIVIFGAFLGLALGFLLARRYSRKLAKRTE 133 (150)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 445555566677888888887776555555544444344445555655543
No 44
>PF09125 COX2-transmemb: Cytochrome C oxidase subunit II, transmembrane; InterPro: IPR015209 This N-terminal domain forms the transmembrane region in subunit II of cytochrome c oxidase from Thermus thermophilus. This domain adopts a tertiary structure consisting of two antiparallel transmembrane helices, in a transmembrane helix hairpin fold []. ; PDB: 1EHK_B 2QPE_B 3S8F_B 4EV3_B 3BVD_B 3S8G_B 3EH3_B 3S3C_B 3S39_B 3QJQ_B ....
Probab=21.90 E-value=1.3e+02 Score=19.69 Aligned_cols=21 Identities=29% Similarity=0.512 Sum_probs=14.2
Q ss_pred HhHHHHHHHHHHHHHHHHHhh
Q 019299 229 ASSIVMLIGYFAYLVFQLWTH 249 (343)
Q Consensus 229 ~~siiLl~~Y~~yl~f~l~th 249 (343)
..|+.|+++|++.+-|.+-+|
T Consensus 18 ~F~l~mi~vFi~li~ytl~th 38 (38)
T PF09125_consen 18 AFALAMILVFIALIGYTLATH 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 356677777777777776665
No 45
>PF04178 Got1: Got1/Sft2-like family ; InterPro: IPR007305 Traffic through the yeast Golgi complex depends on a member of the syntaxin family of SNARE proteins, Sed5, present in early Golgi cisternae. Got1 is thought to facilitate Sed5-dependent fusion events []. This is a family of sequences derived from eukaryotic proteins. They are similar to a region of a SNARE-like protein required for traffic through the Golgi complex, SFT2 protein (P38166 from SWISSPROT) []. This is a conserved protein with four putative transmembrane helices, thought to be involved in vesicular transport in later Golgi compartments []. ; GO: 0016192 vesicle-mediated transport
Probab=21.77 E-value=3.5e+02 Score=22.08 Aligned_cols=18 Identities=28% Similarity=0.429 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHhhcccc
Q 019299 159 LSNLLLVLGTSLFCGGIA 176 (343)
Q Consensus 159 l~NlllvlG~~~l~gg~~ 176 (343)
+.|++.+.|.+++.|..+
T Consensus 32 lGnil~l~s~~fL~Gp~~ 49 (118)
T PF04178_consen 32 LGNILFLASTFFLIGPKK 49 (118)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 446677899999988654
No 46
>PF12263 DUF3611: Protein of unknown function (DUF3611); InterPro: IPR022051 This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 180 and 205 amino acids in length. There are two completely conserved residues (W and G) that may be functionally important.
Probab=20.73 E-value=6.1e+02 Score=22.63 Aligned_cols=70 Identities=10% Similarity=0.040 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhccccCCCCCCCCCCccCCCcchHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 019299 230 SSIVMLIGYFAYLVFQLWTHREFFEAQEDSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDA 302 (343)
Q Consensus 230 ~siiLl~~Y~~yl~f~l~th~~~f~~~~~~~~~~~~~~~~~~~~~~~~i~~Lv~~~~~i~~~s~~lV~si~~i 302 (343)
...++...+-.|.-|.+.+..+..+..+++.. .+.++-....+..+..=++++.+-.+++|..|...-.-
T Consensus 63 ~~gl~~l~~si~~~fry~Rlar~L~~~~~~~~---P~k~~~~~~l~~Gl~~nl~Gmllt~lG~~a~vG~L~ak 132 (183)
T PF12263_consen 63 ICGLVALFFSIFWSFRYTRLARRLRSPNPAKR---PSKADVVRLLRIGLIINLVGMLLTLLGAQATVGTLVAK 132 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455555666666665544332221111100 01111112345566666777888888888888766543
No 47
>PF10066 DUF2304: Uncharacterized conserved protein (DUF2304); InterPro: IPR019277 This entry represents hypothetical archaeal and bacterial proteins that have no known function.
Probab=20.56 E-value=4.6e+02 Score=21.15 Aligned_cols=36 Identities=17% Similarity=0.109 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCchh
Q 019299 275 WSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSF 312 (343)
Q Consensus 275 ~~~i~~Lv~~~~~i~~~s~~lV~si~~i~~~~gis~~f 312 (343)
..++.|++.+.+++.+.-.. +-.+.+++-.|+....
T Consensus 31 ~~~l~Wl~~~i~~l~~~ifP--~~~~~vA~~lGi~~~~ 66 (115)
T PF10066_consen 31 KYSLLWLVFSIILLILSIFP--NILDWVAKLLGIGRPP 66 (115)
T ss_pred HHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHCCCchh
Confidence 34677777777666655444 7778888888876543
No 48
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species.
Probab=20.37 E-value=4.8e+02 Score=25.94 Aligned_cols=53 Identities=9% Similarity=0.119 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHhhc-CCCchhHHHHHHHhhhhhHHHH
Q 019299 276 SGFAWLVGMTAIIALLSEFVVGTIEDASNSW-GISVSFISIILLPIVGNAAEHA 328 (343)
Q Consensus 276 ~~i~~Lv~~~~~i~~~s~~lV~si~~i~~~~-gis~~fiGlillpi~tnlpE~~ 328 (343)
+.+.+.+.....++..++.+.+......... +-.-..+-++.+.++++.|...
T Consensus 206 ~~l~~~la~a~~v~~~s~~la~~l~~~~~~~~~~~~~il~~tt~~l~~~~~~~~ 259 (378)
T PF05684_consen 206 QDLAFLLAVAFAVVALSHALAAWLPPLFAGISSSTWLILTVTTLGLATSFPPFR 259 (378)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHhccchh
Confidence 4455555555566667777777775443332 2222444555667777776643
No 49
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=20.14 E-value=5.6e+02 Score=22.01 Aligned_cols=18 Identities=28% Similarity=0.355 Sum_probs=15.0
Q ss_pred HHHHHHHHHHhhcCCCch
Q 019299 294 FVVGTIEDASNSWGISVS 311 (343)
Q Consensus 294 ~lV~si~~i~~~~gis~~ 311 (343)
-++.-++.+|+..|+|+.
T Consensus 80 ~~~~fi~~vA~~~~V~~~ 97 (149)
T PF11694_consen 80 QMVHFIESVAKDLGVSKE 97 (149)
T ss_pred HHHHHHHHHHHHhCCChh
Confidence 377889999999998874
No 50
>PRK13027 C4-dicarboxylate transporter DctA; Reviewed
Probab=20.00 E-value=8.5e+02 Score=24.56 Aligned_cols=28 Identities=14% Similarity=0.230 Sum_probs=20.7
Q ss_pred HHHHHHHHHhhcCCCchhHHHHHHHhhhhh
Q 019299 295 VVGTIEDASNSWGISVSFISIILLPIVGNA 324 (343)
Q Consensus 295 lV~si~~i~~~~gis~~fiGlillpi~tnl 324 (343)
+--+++.. |++|+|+...+++ +|+|.+.
T Consensus 273 LPv~~~~~-e~lgv~~~ia~fv-lPLGati 300 (421)
T PRK13027 273 LPQVMRKL-EHMGIKDSTVGLV-IPTGYSF 300 (421)
T ss_pred HHHHHHHH-HHcCCCccceeEE-eeccccc
Confidence 44445544 6799999999986 6998775
Done!