Query 019299
Match_columns 343
No_of_seqs 309 out of 1848
Neff 7.0
Searched_HMMs 13730
Date Mon Mar 25 13:56:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019299.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019299hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2o1ra1 d.145.1.4 (A:1-78) Hyp 14.9 34 0.0025 22.9 1.8 24 111-134 17-48 (78)
2 d2rk5a1 d.145.1.4 (A:5-88) Put 14.4 36 0.0026 23.0 1.8 24 111-134 17-48 (84)
3 d2p3ha1 d.145.1.4 (A:5-102) Un 12.0 46 0.0033 23.4 1.8 24 111-134 20-51 (98)
4 d2plia1 d.145.1.4 (A:5-88) Unc 11.5 50 0.0037 22.3 1.9 24 111-134 22-53 (84)
5 d2r2za1 d.145.1.4 (A:5-88) Put 10.7 55 0.004 22.1 1.8 24 111-134 20-51 (84)
6 d2p13a1 d.145.1.4 (A:431-515) 8.6 73 0.0053 21.4 1.8 16 119-134 40-55 (85)
7 d2p4pa1 d.145.1.4 (A:1-82) Hyp 8.2 77 0.0056 21.1 1.8 16 119-134 35-50 (82)
8 d2nqwa1 d.145.1.4 (A:4-90) Hyp 7.5 87 0.0064 21.0 1.8 16 119-134 41-56 (87)
9 d3deda1 d.145.1.4 (A:341-427) 7.4 88 0.0064 21.0 1.8 15 120-134 42-56 (87)
10 d2axtl1 f.23.31.1 (L:1-37) Pho 6.8 2.3E+02 0.017 15.9 3.7 25 181-205 7-31 (37)
No 1
>d2o1ra1 d.145.1.4 (A:1-78) Hypothetical protein HI0107 {Haemophilus influenzae [TaxId: 727]}
Probab=14.86 E-value=34 Score=22.88 Aligned_cols=24 Identities=13% Similarity=0.159 Sum_probs=19.5
Q ss_pred HHHHHHhC--------cchhhhHHhhhcchhH
Q 019299 111 EQIAFYTG--------PTVGGLLNATCGNATE 134 (343)
Q Consensus 111 e~lA~~~G--------~~vggll~a~~gslpE 134 (343)
+++.+++| +++||+++--+|.+||
T Consensus 17 ~dl~~~l~~~l~~~~~~Ti~G~v~~~lg~iP~ 48 (78)
T d2o1ra1 17 RDLNKMFNWELDTEDARTFNGLILEHLEEIPD 48 (78)
T ss_dssp HHHHHHHCCCCCCSSCSBHHHHHHHHCSSCCC
T ss_pred HHHHHHHCCCCCCccchHHHHHHHHHhCcCCC
Confidence 55666666 4999999999999986
No 2
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=14.38 E-value=36 Score=22.96 Aligned_cols=24 Identities=17% Similarity=0.286 Sum_probs=18.9
Q ss_pred HHHHHHhC--------cchhhhHHhhhcchhH
Q 019299 111 EQIAFYTG--------PTVGGLLNATCGNATE 134 (343)
Q Consensus 111 e~lA~~~G--------~~vggll~a~~gslpE 134 (343)
+++.+++| +++||+++--+|.+|+
T Consensus 17 ~dl~~~l~~~l~~~~~dTlgG~v~~~lg~iP~ 48 (84)
T d2rk5a1 17 NDFNEYFETDLESDNVDTIAGFYLTGVGTIPS 48 (84)
T ss_dssp HHHHHHHTCCCCCTTCCBHHHHHHHHHCSCCC
T ss_pred HHHHHHhCCCcccccchhHHHHHHHHhCcCCC
Confidence 45556666 4999999999999886
No 3
>d2p3ha1 d.145.1.4 (A:5-102) Uncharacterized protein Cgl1194/Cg1349 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=11.98 E-value=46 Score=23.40 Aligned_cols=24 Identities=21% Similarity=0.332 Sum_probs=18.9
Q ss_pred HHHHHHhC--------cchhhhHHhhhcchhH
Q 019299 111 EQIAFYTG--------PTVGGLLNATCGNATE 134 (343)
Q Consensus 111 e~lA~~~G--------~~vggll~a~~gslpE 134 (343)
+++.+.+| +++||+++.-+|.+|+
T Consensus 20 ~dl~~~l~~~l~~~~~~Tl~G~~~~~lg~iP~ 51 (98)
T d2p3ha1 20 DEVERAIGYELPEGDYETISGLLFDHANALLK 51 (98)
T ss_dssp HHHHHHHTSCCCCSSCCBHHHHHHHHHCSCCC
T ss_pred HHHHHHHCCCCCCCCccCHHHHHHHHHCcCCC
Confidence 45555665 5999999999999987
No 4
>d2plia1 d.145.1.4 (A:5-88) Uncharacterized protein NMB0537 {Neisseria meningitidis [TaxId: 487]}
Probab=11.49 E-value=50 Score=22.35 Aligned_cols=24 Identities=33% Similarity=0.551 Sum_probs=19.2
Q ss_pred HHHHHHhC--------cchhhhHHhhhcchhH
Q 019299 111 EQIAFYTG--------PTVGGLLNATCGNATE 134 (343)
Q Consensus 111 e~lA~~~G--------~~vggll~a~~gslpE 134 (343)
+++.+.+| +++||+++--+|.+|+
T Consensus 22 ~dl~~~~~~~l~~~~~~TigG~i~~~l~~iP~ 53 (84)
T d2plia1 22 EDINTFFGTEYSSEEADTIGGLVIQELGHLPV 53 (84)
T ss_dssp HHHHHHHCCCCCCSSCCBHHHHHHHHHSSCCC
T ss_pred HHHHHHhCCCCCccccHHHHHHHHHHhCcccc
Confidence 45666666 4999999999998886
No 5
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus faecalis [TaxId: 1351]}
Probab=10.67 E-value=55 Score=22.06 Aligned_cols=24 Identities=17% Similarity=0.246 Sum_probs=18.5
Q ss_pred HHHHHHhC--------cchhhhHHhhhcchhH
Q 019299 111 EQIAFYTG--------PTVGGLLNATCGNATE 134 (343)
Q Consensus 111 e~lA~~~G--------~~vggll~a~~gslpE 134 (343)
+++.+.+| +++||+++--+|.+|+
T Consensus 20 ~dl~~~l~~~l~~~~~~TigG~i~~~lg~iP~ 51 (84)
T d2r2za1 20 DEFNEVFETDLHMSDVDTMAGYLITALGTIPD 51 (84)
T ss_dssp HHHHHHHTCCCCCTTCCBHHHHHHHHHSSCCC
T ss_pred HHHHHHHCcCCCCccchhHHHHHHHHhCcCCC
Confidence 44555665 4999999999998887
No 6
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=8.64 E-value=73 Score=21.38 Aligned_cols=16 Identities=31% Similarity=0.397 Sum_probs=14.2
Q ss_pred cchhhhHHhhhcchhH
Q 019299 119 PTVGGLLNATCGNATE 134 (343)
Q Consensus 119 ~~vggll~a~~gslpE 134 (343)
+++||+++--+|.+|+
T Consensus 40 ~TlgG~i~~~lg~iP~ 55 (85)
T d2p13a1 40 STLGGYLLWQFGYIPA 55 (85)
T ss_dssp CBHHHHHHHHHSSCCC
T ss_pred eEHHHHHHHHhCcCCC
Confidence 3999999999999886
No 7
>d2p4pa1 d.145.1.4 (A:1-82) Hypothetical protein HD1797 {Haemophilus ducreyi [TaxId: 730]}
Probab=8.23 E-value=77 Score=21.11 Aligned_cols=16 Identities=19% Similarity=0.353 Sum_probs=14.1
Q ss_pred cchhhhHHhhhcchhH
Q 019299 119 PTVGGLLNATCGNATE 134 (343)
Q Consensus 119 ~~vggll~a~~gslpE 134 (343)
+++||+++--+|.+|+
T Consensus 35 ~TlgG~i~~~lg~iP~ 50 (82)
T d2p4pa1 35 ETIGGFMMYMLRKIPK 50 (82)
T ss_dssp CBHHHHHHHHHCSCCC
T ss_pred cCHHHHHHHHhCcCCC
Confidence 3999999999999886
No 8
>d2nqwa1 d.145.1.4 (A:4-90) Hypothetical protein PG0272 {Porphyromonas gingivalis [TaxId: 837]}
Probab=7.51 E-value=87 Score=21.00 Aligned_cols=16 Identities=19% Similarity=0.198 Sum_probs=14.2
Q ss_pred cchhhhHHhhhcchhH
Q 019299 119 PTVGGLLNATCGNATE 134 (343)
Q Consensus 119 ~~vggll~a~~gslpE 134 (343)
+++||+++--+|.+||
T Consensus 41 ~Ti~G~i~~~lg~iP~ 56 (87)
T d2nqwa1 41 DTLSGLFLEIKQELPH 56 (87)
T ss_dssp SBHHHHHHHHHCSCCC
T ss_pred eeHHHHHHHHhCcccc
Confidence 5999999999998886
No 9
>d3deda1 d.145.1.4 (A:341-427) Probable hemolysin CV0231 {Chromobacterium violaceum [TaxId: 536]}
Probab=7.45 E-value=88 Score=21.01 Aligned_cols=15 Identities=20% Similarity=0.370 Sum_probs=13.6
Q ss_pred chhhhHHhhhcchhH
Q 019299 120 TVGGLLNATCGNATE 134 (343)
Q Consensus 120 ~vggll~a~~gslpE 134 (343)
++||+++.-+|.+|+
T Consensus 42 TlgG~il~~lg~iP~ 56 (87)
T d3deda1 42 TLAGVMLYQLGRVPS 56 (87)
T ss_dssp BHHHHHHHHHCSSCC
T ss_pred CHHHHHHHHhCcCCC
Confidence 899999999999886
No 10
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=6.78 E-value=2.3e+02 Score=15.93 Aligned_cols=25 Identities=20% Similarity=0.295 Sum_probs=13.5
Q ss_pred cccchhhhcchHHHHHHHHHHHHHH
Q 019299 181 EQKYDRKQADVNSLLLLLALLCHML 205 (343)
Q Consensus 181 ~~~~~~~~a~~~~~ll~la~l~l~l 205 (343)
+|.......+.+..++++-+++.++
T Consensus 7 ~q~veLNrtsLy~GlLlifvl~vLF 31 (37)
T d2axtl1 7 RQPVELNRTSLYLGLLLILVLALLF 31 (37)
T ss_dssp CCCBCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCccccchhhHHHHHHHHHHHHHHH
Confidence 4444433446666677666655443
Done!