Query 019306
Match_columns 343
No_of_seqs 145 out of 209
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 08:23:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019306.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019306hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06027 DUF914: Eukaryotic pr 100.0 2.7E-29 5.9E-34 245.9 8.8 186 128-323 26-213 (334)
2 KOG2766 Predicted membrane pro 99.9 3.9E-26 8.5E-31 215.8 -3.0 184 124-322 26-210 (336)
3 KOG3912 Predicted integral mem 99.9 7.2E-22 1.6E-26 189.0 10.5 197 119-321 6-221 (372)
4 PF08627 CRT-like: CRT-like; 99.8 3.7E-19 8E-24 152.1 6.1 82 107-188 48-130 (130)
5 PF08449 UAA: UAA transporter 99.6 5.2E-16 1.1E-20 148.4 9.1 186 125-321 9-199 (303)
6 PF04142 Nuc_sug_transp: Nucle 99.5 3.3E-15 7.1E-20 140.7 4.2 135 184-324 18-162 (244)
7 PTZ00343 triose or hexose phos 99.1 2.1E-10 4.6E-15 112.6 10.4 175 111-295 44-219 (350)
8 TIGR00817 tpt Tpt phosphate/ph 99.1 2.5E-10 5.3E-15 108.6 9.6 190 116-325 2-194 (302)
9 KOG2234 Predicted UDP-galactos 98.8 1.7E-08 3.7E-13 99.8 8.3 133 184-322 93-229 (345)
10 KOG1581 UDP-galactose transpor 98.6 2.3E-07 4.9E-12 90.5 10.4 199 111-320 9-220 (327)
11 PLN00411 nodulin MtN21 family 98.5 1.7E-07 3.8E-12 93.0 7.8 181 112-296 9-215 (358)
12 KOG1441 Glucose-6-phosphate/ph 98.4 4.5E-06 9.9E-11 82.2 12.4 196 112-322 13-211 (316)
13 PF13536 EmrE: Multidrug resis 98.3 1.4E-07 2.9E-12 78.3 0.7 98 161-259 12-110 (113)
14 TIGR00950 2A78 Carboxylate/Ami 98.2 1.8E-06 3.9E-11 79.4 5.8 104 184-293 47-151 (260)
15 COG0697 RhaT Permeases of the 98.2 1.2E-05 2.7E-10 73.5 10.2 166 119-293 10-177 (292)
16 KOG1583 UDP-N-acetylglucosamin 98.2 1.6E-06 3.5E-11 84.0 4.3 176 119-299 5-193 (330)
17 KOG2765 Predicted membrane pro 98.0 4.9E-06 1.1E-10 83.4 5.2 132 189-324 165-297 (416)
18 KOG4510 Permease of the drug/m 98.0 1.6E-05 3.4E-10 77.1 7.3 144 183-338 96-248 (346)
19 PRK11453 O-acetylserine/cystei 98.0 2.7E-05 5.9E-10 74.4 8.6 102 187-292 62-165 (299)
20 TIGR03340 phn_DUF6 phosphonate 97.8 4.8E-05 1E-09 72.0 7.2 102 184-291 63-165 (281)
21 PF00892 EamA: EamA-like trans 97.8 1.7E-05 3.6E-10 63.9 3.2 70 184-253 54-124 (126)
22 PRK11689 aromatic amino acid e 97.8 0.00014 3.1E-09 69.5 10.1 161 121-292 9-178 (295)
23 PRK15430 putative chlorampheni 97.7 6.3E-05 1.4E-09 71.9 6.9 92 190-292 80-171 (296)
24 PRK11272 putative DMT superfam 97.7 0.00015 3.3E-09 69.1 9.5 164 115-292 7-172 (292)
25 TIGR00688 rarD rarD protein. T 97.7 0.0001 2.2E-09 68.5 7.5 96 186-292 73-168 (256)
26 KOG1582 UDP-galactose transpor 97.3 0.00042 9E-09 67.6 6.5 197 112-321 39-237 (367)
27 COG2510 Predicted membrane pro 97.2 0.0011 2.4E-08 58.1 7.0 131 119-254 6-138 (140)
28 PF05653 Mg_trans_NIPA: Magnes 97.2 0.00064 1.4E-08 66.3 5.7 74 185-258 51-125 (300)
29 KOG1580 UDP-galactose transpor 97.0 0.0002 4.3E-09 68.7 0.8 171 111-316 46-216 (337)
30 PRK10532 threonine and homoser 97.0 0.0057 1.2E-07 58.4 10.2 157 117-292 14-170 (293)
31 TIGR00776 RhaT RhaT L-rhamnose 96.8 0.012 2.6E-07 56.7 11.0 102 190-291 66-173 (290)
32 TIGR00950 2A78 Carboxylate/Ami 96.7 0.0056 1.2E-07 56.3 7.2 65 186-250 194-259 (260)
33 KOG1444 Nucleotide-sugar trans 96.5 0.025 5.5E-07 55.9 11.3 190 113-321 9-202 (314)
34 PF03151 TPT: Triose-phosphate 96.4 0.0087 1.9E-07 50.8 6.1 68 185-252 83-150 (153)
35 KOG1443 Predicted integral mem 96.3 0.022 4.8E-07 56.4 9.3 169 118-296 18-190 (349)
36 PF08449 UAA: UAA transporter 95.9 0.012 2.6E-07 56.6 5.2 135 116-252 155-294 (303)
37 KOG1442 GDP-fucose transporter 95.8 0.04 8.6E-07 54.2 8.2 108 204-323 123-232 (347)
38 TIGR00803 nst UDP-galactose tr 95.7 0.012 2.5E-07 53.9 4.1 107 188-295 4-110 (222)
39 TIGR03340 phn_DUF6 phosphonate 95.5 0.01 2.2E-07 56.2 3.1 68 185-252 212-280 (281)
40 KOG2922 Uncharacterized conser 94.9 0.036 7.8E-07 55.1 4.8 70 187-256 67-137 (335)
41 PRK15051 4-amino-4-deoxy-L-ara 94.4 0.012 2.7E-07 49.3 0.3 64 191-254 45-108 (111)
42 PRK10532 threonine and homoser 93.9 0.19 4.1E-06 48.1 7.2 70 187-256 212-282 (293)
43 PRK11689 aromatic amino acid e 93.6 0.086 1.9E-06 50.4 4.4 70 187-256 219-288 (295)
44 PLN00411 nodulin MtN21 family 93.3 0.14 3.1E-06 51.2 5.5 68 189-256 262-329 (358)
45 TIGR00803 nst UDP-galactose tr 93.1 0.25 5.5E-06 45.1 6.5 67 186-252 155-221 (222)
46 COG0697 RhaT Permeases of the 92.7 0.19 4.2E-06 45.8 5.1 70 185-254 216-286 (292)
47 PTZ00343 triose or hexose phos 91.8 0.28 6E-06 48.6 5.4 62 191-252 280-345 (350)
48 TIGR00776 RhaT RhaT L-rhamnose 91.3 0.097 2.1E-06 50.4 1.4 72 184-255 212-288 (290)
49 KOG4314 Predicted carbohydrate 91.2 0.2 4.4E-06 47.4 3.4 116 194-321 64-181 (290)
50 PRK15430 putative chlorampheni 91.2 0.077 1.7E-06 50.8 0.6 70 187-256 217-286 (296)
51 PF10639 UPF0546: Uncharacteri 90.3 0.16 3.4E-06 43.5 1.7 72 183-254 41-113 (113)
52 PRK11272 putative DMT superfam 89.9 0.094 2E-06 50.0 0.0 68 186-253 215-283 (292)
53 PRK02971 4-amino-4-deoxy-L-ara 89.6 0.4 8.6E-06 41.5 3.7 115 119-255 5-122 (129)
54 TIGR00817 tpt Tpt phosphate/ph 87.6 0.72 1.6E-05 44.0 4.3 56 198-253 236-291 (302)
55 PRK10452 multidrug efflux syst 86.9 0.23 5E-06 42.8 0.4 72 185-256 32-104 (120)
56 PF04142 Nuc_sug_transp: Nucle 86.0 4.4 9.5E-05 38.5 8.7 128 115-246 114-244 (244)
57 PRK11453 O-acetylserine/cystei 84.6 2 4.4E-05 41.0 5.8 71 186-256 217-288 (299)
58 PF06800 Sugar_transport: Suga 83.8 1.6 3.5E-05 42.5 4.7 70 183-252 195-268 (269)
59 PF12398 DUF3660: Receptor ser 83.8 0.74 1.6E-05 33.0 1.7 30 33-62 3-32 (42)
60 PF06027 DUF914: Eukaryotic pr 79.8 5.2 0.00011 40.1 6.8 58 199-256 249-306 (334)
61 KOG4314 Predicted carbohydrate 77.8 5.4 0.00012 38.1 5.8 137 120-257 139-278 (290)
62 PF15169 DUF4564: Domain of un 75.4 2.3 5E-05 39.5 2.6 56 231-295 15-73 (187)
63 PRK10650 multidrug efflux syst 74.6 1.4 3.1E-05 37.3 1.0 70 184-253 36-106 (109)
64 PRK09541 emrE multidrug efflux 74.6 1.4 3E-05 37.3 0.9 64 193-256 40-104 (110)
65 KOG2765 Predicted membrane pro 72.5 15 0.00032 37.9 7.7 82 176-257 306-392 (416)
66 PF03151 TPT: Triose-phosphate 70.1 2.3 5E-05 35.9 1.3 53 272-325 2-54 (153)
67 PF00893 Multi_Drug_Res: Small 65.7 7 0.00015 31.6 3.2 60 186-245 32-92 (93)
68 PF02694 UPF0060: Uncharacteri 63.8 8.7 0.00019 32.8 3.5 49 208-256 56-104 (107)
69 PRK11431 multidrug efflux syst 63.5 2.7 5.8E-05 35.3 0.4 65 189-253 35-100 (105)
70 PF06570 DUF1129: Protein of u 62.4 25 0.00054 32.4 6.5 56 182-237 145-203 (206)
71 KOG1581 UDP-galactose transpor 59.1 32 0.0007 34.5 7.0 68 185-252 243-310 (327)
72 COG2076 EmrE Membrane transpor 58.3 4.9 0.00011 34.2 1.0 71 183-253 30-101 (106)
73 PF04657 DUF606: Protein of un 54.0 44 0.00094 29.1 6.3 70 178-251 60-137 (138)
74 KOG1580 UDP-galactose transpor 51.7 4.1 8.9E-05 39.8 -0.5 75 183-257 241-315 (337)
75 COG1742 Uncharacterized conser 50.6 9.5 0.00021 32.6 1.6 49 208-256 57-105 (109)
76 KOG1441 Glucose-6-phosphate/ph 50.0 7.7 0.00017 38.7 1.1 69 184-252 233-304 (316)
77 PRK13499 rhamnose-proton sympo 45.5 15 0.00033 37.1 2.4 98 189-286 79-190 (345)
78 KOG2234 Predicted UDP-galactos 44.3 59 0.0013 33.1 6.3 140 112-254 180-321 (345)
79 KOG1442 GDP-fucose transporter 43.5 42 0.00091 33.6 5.0 118 128-249 197-321 (347)
80 PF04973 NMN_transporter: Nico 43.1 83 0.0018 28.2 6.6 106 127-233 28-133 (181)
81 KOG4510 Permease of the drug/m 39.2 24 0.00051 35.2 2.5 66 183-248 253-318 (346)
82 PRK02237 hypothetical protein; 39.0 8.5 0.00018 32.9 -0.4 48 208-255 58-105 (109)
83 COG5070 VRG4 Nucleotide-sugar 38.7 88 0.0019 30.6 6.2 157 121-283 11-171 (309)
84 PF06800 Sugar_transport: Suga 37.9 40 0.00086 33.0 3.9 104 187-290 49-158 (269)
85 KOG4831 Unnamed protein [Funct 34.9 23 0.00051 30.6 1.5 72 182-253 51-123 (125)
86 PRK13499 rhamnose-proton sympo 30.3 1.3E+02 0.0029 30.4 6.3 47 187-234 264-314 (345)
87 PF02554 CstA: Carbon starvati 23.6 3.3E+02 0.0071 28.2 7.7 49 228-276 234-293 (376)
88 COG4858 Uncharacterized membra 22.1 5.6E+02 0.012 24.4 8.2 62 178-239 156-220 (226)
89 COG0805 TatC Sec-independent p 20.3 7.8E+02 0.017 24.0 9.3 95 108-211 102-216 (255)
90 COG2962 RarD Predicted permeas 20.2 65 0.0014 32.1 1.9 77 179-255 66-144 (293)
No 1
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=2.7e-29 Score=245.93 Aligned_cols=186 Identities=23% Similarity=0.210 Sum_probs=158.8
Q ss_pred hhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehhhHHHHHHHHHHHhhcccc
Q 019306 128 GVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAIL 207 (343)
Q Consensus 128 Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~imGllDal~~~L~viA~~yt 207 (343)
..+|.....+..+ -.|.|.|++.+.......+|.+++.+|+..+... ++...|+|+|+++|++|+++|++.++|++||
T Consensus 26 ~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~-~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yT 103 (334)
T PF06027_consen 26 TGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWL-KVLKRPWWKYFLLALLDVEANYLVVLAYQYT 103 (334)
T ss_pred HhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccch-hhcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3444555555555 7799999998777777788999888887665433 3566789999999999999999999999999
Q ss_pred cccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCC--CCCCcchHHHHHHHHHhHHHHHH
Q 019306 208 SGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH--SLKGAGIFWSLLMIVSFLLQAAD 285 (343)
Q Consensus 208 sgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~--s~~~~~vlw~lL~ilS~ip~A~S 285 (343)
+.++.|+|+|++|||++++|++|||+||++.|++|+++|++|+++++.+|..+++ ..+++.++||+++++|+++||++
T Consensus 104 svtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~ 183 (334)
T PF06027_consen 104 SVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVS 183 (334)
T ss_pred cHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998754432 34688999999999999999999
Q ss_pred HHHHHHHhHHHHHhhcCCCCeEEEeeehhhhHHHHhhh
Q 019306 286 TVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQDVMVHR 323 (343)
Q Consensus 286 nV~kE~~F~~~~~~LK~~ldif~vns~~s~fQ~ifv~~ 323 (343)
||+||+.++| .|...+.++.++|++++..+
T Consensus 184 nV~~E~~v~~--------~~~~~~lg~~Glfg~ii~~i 213 (334)
T PF06027_consen 184 NVLEEKLVKK--------APRVEFLGMLGLFGFIISGI 213 (334)
T ss_pred HHHHHHhccc--------CCHHHHHHHHHHHHHHHHHH
Confidence 9999998765 45566789999999998754
No 2
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.90 E-value=3.9e-26 Score=215.84 Aligned_cols=184 Identities=19% Similarity=0.175 Sum_probs=157.1
Q ss_pred HHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehhhHHHHHHHHHHHhh
Q 019306 124 TVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAA 203 (343)
Q Consensus 124 ~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~imGllDal~~~L~viA 203 (343)
+=++.++|....-.+..+--|-|-+++.+......++|.+++.+|.. ..+..|++|+++|+.|+++|++++.|
T Consensus 26 LSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-------~~~~~~~hYilla~~DVEaNy~vV~A 98 (336)
T KOG2766|consen 26 LSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK-------YIKAKWRHYILLAFVDVEANYFVVKA 98 (336)
T ss_pred HHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH-------HHHHHHHHhhheeEEeecccEEEeee
Confidence 33445666666666667778999888887777777899999988852 23344678999999999999999999
Q ss_pred cccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCC-CCCCcchHHHHHHHHHhHHH
Q 019306 204 GAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH-SLKGAGIFWSLLMIVSFLLQ 282 (343)
Q Consensus 204 ~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~-s~~~~~vlw~lL~ilS~ip~ 282 (343)
++||+.++.++|++|.||+.+++||+|||.||++.|+.|+++|++|+++++.||-.+|+ +.++|+++||.++++|+.++
T Consensus 99 yQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlY 178 (336)
T KOG2766|consen 99 YQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLY 178 (336)
T ss_pred hhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceee
Confidence 99999999999999999999999999999999999999999999999999999866544 35789999999999999999
Q ss_pred HHHHHHHHHHhHHHHHhhcCCCCeEEEeeehhhhHHHHhh
Q 019306 283 AADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQDVMVH 322 (343)
Q Consensus 283 A~SnV~kE~~F~~~~~~LK~~ldif~vns~~s~fQ~ifv~ 322 (343)
|+|||.||++-|+ .|..++.++.++|.+|++.
T Consensus 179 aVSNv~EEflvkn--------~d~~elm~~lgLfGaIIsa 210 (336)
T KOG2766|consen 179 AVSNVSEEFLVKN--------ADRVELMGFLGLFGAIISA 210 (336)
T ss_pred eeccccHHHHHhc--------CcHHHHHHHHHHHHHHHHH
Confidence 9999999998654 7777778888888777764
No 3
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.86 E-value=7.2e-22 Score=188.98 Aligned_cols=197 Identities=20% Similarity=0.213 Sum_probs=157.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHhC------CCCChhHHHHHHhh---hhhhHhHHHHHHHHHhcCccc-----hhhh--cCC
Q 019306 119 IAAAVTVLLGVGNRVLYKLALV------PLKHYPFFLAQLAT---FGYVAVYFSILYLRYHAGIVT-----DEML--SMP 182 (343)
Q Consensus 119 i~~i~~Vi~Gv~N~Vl~Kl~~~------~~~nYp~Fl~q~~t---~~yv~vyf~il~~r~~~~~it-----~eml--~~P 182 (343)
++.+.||+.|+.|+++.|-+.+ |.+++|+.++..+. |.++.+|+.+-..-.+.|... ..+. .+.
T Consensus 6 ~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~ 85 (372)
T KOG3912|consen 6 FLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN 85 (372)
T ss_pred hhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC
Confidence 4678899999999999999876 55788988777555 344444433322212222222 0112 344
Q ss_pred CcceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCC--
Q 019306 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNP-- 260 (343)
Q Consensus 183 k~kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~-- 260 (343)
+.-|+.+++||++|+.+++.|+.+|+.+++||++++.|.|+-++|.-||+++.+..||+|.+.+..|+++++.++-..
T Consensus 86 p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~ 165 (372)
T KOG3912|consen 86 PVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVT 165 (372)
T ss_pred cceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccccc
Confidence 556888999999999999999999999999999999999999999999999999999999999999999999885322
Q ss_pred -CCCCCCcchHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeeehhhhHHHHh
Q 019306 261 -GHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQDVMV 321 (343)
Q Consensus 261 -g~s~~~~~vlw~lL~ilS~ip~A~SnV~kE~~F~~~~~~LK~~ldif~vns~~s~fQ~ifv 321 (343)
.-.+.++.+.|++++++++++-|+|.|+|||..+++ .+|+....+|++.|.+.+.
T Consensus 166 ~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~------nV~pl~avg~eGlfG~v~~ 221 (372)
T KOG3912|consen 166 DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS------NVAPLQAVGWEGLFGLVIL 221 (372)
T ss_pred CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc------cCCHHHHhhhhhhHHHHHH
Confidence 112347789999999999999999999999976553 5999999999999995444
No 4
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=99.77 E-value=3.7e-19 Score=152.06 Aligned_cols=82 Identities=40% Similarity=0.725 Sum_probs=77.2
Q ss_pred cccccCcchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHH-HHhcCccchhhhcCCCcc
Q 019306 107 ISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYL-RYHAGIVTDEMLSMPKAP 185 (343)
Q Consensus 107 ~~~~~~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~-r~~~~~it~eml~~Pk~k 185 (343)
..+-.+++++++++++++|+.|++|+|++|+++++|.||+||++|+++++|+++||+++++ +|+.+.||+||++||+||
T Consensus 48 k~s~~ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlTt~gyvpIffaV~lyk~y~t~~It~Emr~FPkyK 127 (130)
T PF08627_consen 48 KQSYSKENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLTTFGYVPIFFAVVLYKMYFTGDITKEMRAFPKYK 127 (130)
T ss_pred HHhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhcccceehHHHHHHHHHHHHcCCCCHHHHhCcccc
Confidence 4556799999999999999999999999999999999999999999999999999999865 599999999999999999
Q ss_pred eeh
Q 019306 186 FVA 188 (343)
Q Consensus 186 f~i 188 (343)
|++
T Consensus 128 FaI 130 (130)
T PF08627_consen 128 FAI 130 (130)
T ss_pred ccC
Confidence 985
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.64 E-value=5.2e-16 Score=148.41 Aligned_cols=186 Identities=22% Similarity=0.262 Sum_probs=140.5
Q ss_pred HHhhhhhHHHHHHHhC-CCCC-hhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehhhHHHHHHHHHHHh
Q 019306 125 VLLGVGNRVLYKLALV-PLKH-YPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMA 202 (343)
Q Consensus 125 Vi~Gv~N~Vl~Kl~~~-~~~n-Yp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~imGllDal~~~L~vi 202 (343)
...-..|-++.+.... +.++ ||.|++.++...+..+.+....... .++....|.++|++++++|+.+..+...
T Consensus 9 ~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (303)
T PF08449_consen 9 FGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-----FPKSRKIPLKKYAILSFLFFLASVLSNA 83 (303)
T ss_pred HHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-----ccCCCcChHHHHHHHHHHHHHHHHHHHH
Confidence 3333445555544444 4445 8999999887766655443332222 2234556778999999999999999999
Q ss_pred hcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCC---CCCcchHHHHHHHHHh
Q 019306 203 AGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHS---LKGAGIFWSLLMIVSF 279 (343)
Q Consensus 203 A~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s---~~~~~vlw~lL~ilS~ 279 (343)
|..|+|.+.+++++.+.++++|+++.+++||||+..||++++++++|+++...++...++. ...+...|.+++++|.
T Consensus 84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl 163 (303)
T PF08449_consen 84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSL 163 (303)
T ss_pred HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998876433221 2233345999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeeehhhhHHHHh
Q 019306 280 LLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQDVMV 321 (343)
Q Consensus 280 ip~A~SnV~kE~~F~~~~~~LK~~ldif~vns~~s~fQ~ifv 321 (343)
+++|+.+++||+++++| +.+.+....+.++|..++.
T Consensus 164 ~~~a~~~~~qe~~~~~~------~~~~~~~mfy~n~~~~~~~ 199 (303)
T PF08449_consen 164 LLDAFTGVYQEKLFKKY------GKSPWELMFYTNLFSLPFL 199 (303)
T ss_pred HHHHHHHHHHHHHHHHh------CCcHHHHHHHHHHHHHHHH
Confidence 99999999999999886 3444444455555544444
No 6
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.54 E-value=3.3e-15 Score=140.71 Aligned_cols=135 Identities=21% Similarity=0.263 Sum_probs=115.8
Q ss_pred cceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCC--
Q 019306 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPG-- 261 (343)
Q Consensus 184 ~kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g-- 261 (343)
+++++|+++|++.|.+.+.|+.+++++.+|+++|+-|++|.++++++||||.+..||++.++.++|++++...+..+.
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~ 97 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDN 97 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccccc
Confidence 689999999999999999999999999999999999999999999999999999999999999999999887643221
Q ss_pred --CC------CCCcchHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeeehhhhHHHHhhhh
Q 019306 262 --HS------LKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQDVMVHRC 324 (343)
Q Consensus 262 --~s------~~~~~vlw~lL~ilS~ip~A~SnV~kE~~F~~~~~~LK~~ldif~vns~~s~fQ~ifv~~~ 324 (343)
+. ...+.+.|.++++++++..|++.||+|+++|+. +.+++.-|.+-++|.+++.++.
T Consensus 98 ~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~------~~s~~~~N~qL~~~gi~~~~~~ 162 (244)
T PF04142_consen 98 SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS------NVSLWIQNMQLYLFGILFNLLA 162 (244)
T ss_pred ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc------chhHHHHHHHHHHHHHHHHHHH
Confidence 11 134567889999999999999999999987652 3778877877777777776543
No 7
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.13 E-value=2.1e-10 Score=112.64 Aligned_cols=175 Identities=14% Similarity=0.081 Sum_probs=133.5
Q ss_pred cCcchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhc-CccchhhhcCCCcceehh
Q 019306 111 NDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHA-GIVTDEMLSMPKAPFVAV 189 (343)
Q Consensus 111 ~~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~-~~it~eml~~Pk~kf~im 189 (343)
...++++.+++++--.+...-.+..|..++. .+||++++.++...=.+........++++ .++. ......++.+.+
T Consensus 44 ~~~~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~llp~ 120 (350)
T PTZ00343 44 PNFKWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK--SLKLFLKNFLPQ 120 (350)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHHH
Confidence 3578999999988888888889999999887 47999999976633221111111111111 1111 011123467888
Q ss_pred hHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcch
Q 019306 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (343)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~v 269 (343)
|++-.......++|..+++.+..+++.....+++++++.+++|+|+++.+++|++++++|+++....+ .+..+
T Consensus 121 gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~-------~~~~~ 193 (350)
T PTZ00343 121 GLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE-------LHFTW 193 (350)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc-------chhHH
Confidence 99988888888899999999999999999999999999999999999999999999999999976421 12247
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhHH
Q 019306 270 FWSLLMIVSFLLQAADTVLKEVIFLD 295 (343)
Q Consensus 270 lw~lL~ilS~ip~A~SnV~kE~~F~~ 295 (343)
.|.++.++|.+..|+.+++-++..++
T Consensus 194 ~G~~~~l~s~~~~a~~~i~~k~~~~~ 219 (350)
T PTZ00343 194 LAFWCAMLSNLGSSLRSIFAKKTMKN 219 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 79999999999999999999987654
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.12 E-value=2.5e-10 Score=108.61 Aligned_cols=190 Identities=11% Similarity=0.069 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHh---cCccchhhhcCCCcceehhhHH
Q 019306 116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYH---AGIVTDEMLSMPKAPFVAVGLL 192 (343)
Q Consensus 116 ~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~---~~~it~eml~~Pk~kf~imGll 192 (343)
+...++...-.+....+++.|...+. .++|.+++.++...-.+.... .++.. ..+.++ .++++.+.+|++
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~g~~ 74 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNV-FPYPYFKTLISLAVGSLYCLL--SWSSGLPKRLKISS----ALLKLLLPVAIV 74 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-CChhHHHHHHHHHHHHHHHHH--HHHhCCCCCCCCCH----HHHHHHHHHHHH
Confidence 44566777778888888999998874 699999888764322111111 11111 111111 123457778999
Q ss_pred HHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcchHHH
Q 019306 193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWS 272 (343)
Q Consensus 193 Dal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~vlw~ 272 (343)
-+....+.+.|..|++.+..+++..+..+++++++.+++|+|++..+++|+++.++|+++.... + .+....|+
T Consensus 75 ~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~----~---~~~~~~G~ 147 (302)
T TIGR00817 75 HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT----E---LSFNWAGF 147 (302)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC----c---ccccHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999764311 1 13346799
Q ss_pred HHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeeehhhhHHHHhhhhc
Q 019306 273 LLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQDVMVHRCS 325 (343)
Q Consensus 273 lL~ilS~ip~A~SnV~kE~~F~~~~~~LK~~ldif~vns~~s~fQ~ifv~~~s 325 (343)
++.++|.+..|+.+++.++..++ ++.|...+..|...+-+++.+|++
T Consensus 148 ~~~l~a~~~~a~~~v~~k~~~~~------~~~~~~~~~~~~~~~~~~~l~p~~ 194 (302)
T TIGR00817 148 LSAMISNITFVSRNIFSKKAMTI------KSLDKTNLYAYISIMSLFLLSPPA 194 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc------CCCCcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999988875321 148888888777776666665543
No 9
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=98.78 E-value=1.7e-08 Score=99.77 Aligned_cols=133 Identities=18% Similarity=0.142 Sum_probs=113.5
Q ss_pred cceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec---CCCC
Q 019306 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS---GSNP 260 (343)
Q Consensus 184 ~kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s---gs~~ 260 (343)
.|..+|+++-++.|.+.++|+.|.++..+|+..|.-|..|.+++.++|+||.+..||...++-++|+.++-.+ +.++
T Consensus 93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a 172 (345)
T KOG2234|consen 93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGA 172 (345)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 5899999999999999999999999999999999999999999999999999999999999999999988743 2222
Q ss_pred C-CCCCCcchHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeeehhhhHHHHhh
Q 019306 261 G-HSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQDVMVH 322 (343)
Q Consensus 261 g-~s~~~~~vlw~lL~ilS~ip~A~SnV~kE~~F~~~~~~LK~~ldif~vns~~s~fQ~ifv~ 322 (343)
. .....|.+.|-...+.+|...+++.||=|++.|+. +.++|+-|-.-++|..+|.+
T Consensus 173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s------~~s~wi~NiqL~~~g~~f~~ 229 (345)
T KOG2234|consen 173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGS------NVSLWIRNIQLYFFGILFNL 229 (345)
T ss_pred cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC------CchHHHHHHHHHHHHHHHHH
Confidence 1 23468889999999999999999999999986542 37777777666666666653
No 10
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.61 E-value=2.3e-07 Score=90.55 Aligned_cols=199 Identities=16% Similarity=0.204 Sum_probs=143.2
Q ss_pred cCcchHHHHHHHHHHHhhhhhHHH-HHHHhCCC------CChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCC
Q 019306 111 NDRRVEIVIAAAVTVLLGVGNRVL-YKLALVPL------KHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPK 183 (343)
Q Consensus 111 ~~~~~~v~i~~i~~Vi~Gv~N~Vl-~Kl~~~~~------~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk 183 (343)
.++.+.+.+++.+.-.+=+.=-|+ -|++..+. .+.|-|+...+..+-+++-...+ +.++.. -+-.-|+
T Consensus 9 ~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l--~~~k~~---~~~~apl 83 (327)
T KOG1581|consen 9 ANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAML--KWWKKE---LSGVAPL 83 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHH--hccccc---CCCCCch
Confidence 345555555544433322222222 24555544 26677888888877666553333 211111 1234578
Q ss_pred cceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCC-C-CC
Q 019306 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGS-N-PG 261 (343)
Q Consensus 184 ~kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs-~-~g 261 (343)
|+|...++...++..++.-|+.|++=+.|.+--..-+.-+|++=.++-|+||+..+|+.+++|.+|+.+-...+. + .+
T Consensus 84 ~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~ 163 (327)
T KOG1581|consen 84 YKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSS 163 (327)
T ss_pred hHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCcc
Confidence 999999999999999999999999999999999998888999999999999999999999999999887765432 2 23
Q ss_pred CCCCCcchHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCC----eEEEeeehhhhHHHH
Q 019306 262 HSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVD----LFVVNSYGSAFQDVM 320 (343)
Q Consensus 262 ~s~~~~~vlw~lL~ilS~ip~A~SnV~kE~~F~~~~~~LK~~ld----if~vns~~s~fQ~if 320 (343)
++..+|.+.|.+|+...-.+.++-|..|+++|+++ ++. ++.+|-|+..+....
T Consensus 164 ~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~------k~s~~~mM~~vNLf~~i~~~~~ 220 (327)
T KOG1581|consen 164 KSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY------KVSSLHMMFGVNLFSAILNGTY 220 (327)
T ss_pred ccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC------CccHhHHHHHHHHHHHHHHHHh
Confidence 33347999999999999999999999999999865 344 455555555555544
No 11
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.55 E-value=1.7e-07 Score=93.04 Aligned_cols=181 Identities=17% Similarity=0.215 Sum_probs=120.2
Q ss_pred CcchHHHHHHHHHHHhhhhhHHHHHHHhCC-CCChhHHHHHHhh-hhhhHhHHHHHHHHHhcCccchhhhcCCCcceehh
Q 019306 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVP-LKHYPFFLAQLAT-FGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAV 189 (343)
Q Consensus 112 ~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~-~~nYp~Fl~q~~t-~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~im 189 (343)
+|..+..+.++++=+.-.+..++.|...+. +..++ +.-+-. +..+ +.+++.+.+.+.+..++... -...+++++
T Consensus 9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~--~~~~R~~iA~l-~Ll~~~~~~~~~~~~~~~~~-~~~~~l~l~ 84 (358)
T PLN00411 9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYP--FLGYSYLLASL-LLLPSLFFTNRSRSLPPLSV-SILSKIGLL 84 (358)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccH--HHHHHHHHHHH-HHHHHHHHHHHhcccCcchH-HHHHHHHHH
Confidence 345666777777777777888888988864 23333 221111 1111 11222333322111111000 011356778
Q ss_pred hHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHH------hccccceeeeehhheeeeeeeEEeecCCCC---
Q 019306 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIF------LGRRYRVNQLFGCFLVGIGVIITVASGSNP--- 260 (343)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~if------Lk~RY~~~qi~G~~IVliGliv~v~sgs~~--- 260 (343)
|++-...+.+.+.|.+||+.....++......|+++++.+| +|+|.+..|++|.+++++|+.+....+...
T Consensus 85 g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~ 164 (358)
T PLN00411 85 GFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFV 164 (358)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccc
Confidence 87776666788999999999999999999999999999999 699999999999999999988765432100
Q ss_pred ---------------CCCCCCcchHHHHHHHHHhHHHHHHHHHHHHHhHHH
Q 019306 261 ---------------GHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDA 296 (343)
Q Consensus 261 ---------------g~s~~~~~vlw~lL~ilS~ip~A~SnV~kE~~F~~~ 296 (343)
+....++.++++++.++|++..|+.+++..+..++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~ 215 (358)
T PLN00411 165 ASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY 215 (358)
T ss_pred ccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 001112236689999999999999999998865543
No 12
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=98.36 E-value=4.5e-06 Score=82.15 Aligned_cols=196 Identities=18% Similarity=0.238 Sum_probs=150.6
Q ss_pred CcchHHHHHHHHHHHhhhhhHHHHHHHhCC-CCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhh--hcCCCcceeh
Q 019306 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVP-LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEM--LSMPKAPFVA 188 (343)
Q Consensus 112 ~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~-~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~em--l~~Pk~kf~i 188 (343)
++.....++...-..+.+...+..|..+++ -.+||.+++.++.+.=...+ + .....+..+... .+.+.+..+-
T Consensus 13 ~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~---~-v~~~l~~~~~~~~~~~~~~~~llp 88 (316)
T KOG1441|consen 13 KKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALAL---L-VIKVLKLVPPSKISSKLPLRTLLP 88 (316)
T ss_pred chhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHH---H-HHHHhcCCCCCccccccchHHHHH
Confidence 466777777888888899999999999998 56999999987332111111 1 111122222221 3345567888
Q ss_pred hhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcc
Q 019306 189 VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAG 268 (343)
Q Consensus 189 mGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~ 268 (343)
+|+.-..+..++..++.|+|.+-.|++--.++|++.++++++.+++|+..-++-.+.++.|+.++-..+ .+-.
T Consensus 89 l~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e-------~~fn 161 (316)
T KOG1441|consen 89 LGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE-------LSFN 161 (316)
T ss_pred HHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc-------cccc
Confidence 999999999999999999999999999999999999999999999999999999999999999876632 2345
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeeehhhhHHHHhh
Q 019306 269 IFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQDVMVH 322 (343)
Q Consensus 269 vlw~lL~ilS~ip~A~SnV~kE~~F~~~~~~LK~~ldif~vns~~s~fQ~ifv~ 322 (343)
++|-+..++|.+.-|++|++.|+.+++. +.++|..-+-.+.+-.++++.+
T Consensus 162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~----~~~~~~~~ll~y~ap~s~~~Ll 211 (316)
T KOG1441|consen 162 LFGFISAMISNLAFALRNILSKKLLTSK----GESLNSMNLLYYTAPISLIFLL 211 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc----ccccCchHHHHHhhhHHHHHHh
Confidence 7888999999999999999999987421 1137777777777777776665
No 13
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.32 E-value=1.4e-07 Score=78.29 Aligned_cols=98 Identities=20% Similarity=0.195 Sum_probs=77.3
Q ss_pred HHHHHHHHHhcCccchhhhcCCCcceehhhHHHH-HHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceee
Q 019306 161 YFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQ 239 (343)
Q Consensus 161 yf~il~~r~~~~~it~eml~~Pk~kf~imGllDa-l~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~q 239 (343)
...+...+.+.++..++.++.|+++....|++.. .+..+.+.|..|+++ ....+.+...+++++++.+++|+|.+..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~ 90 (113)
T PF13536_consen 12 LLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRR 90 (113)
T ss_pred HHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 3344444444444445555544455556688886 899999999999995 77799999999999999999999999999
Q ss_pred eehhheeeeeeeEEeecCCC
Q 019306 240 LFGCFLVGIGVIITVASGSN 259 (343)
Q Consensus 240 i~G~~IVliGliv~v~sgs~ 259 (343)
++|+.++++|++++..++.+
T Consensus 91 ~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 91 WLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHhhhhcc
Confidence 99999999999998887654
No 14
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.22 E-value=1.8e-06 Score=79.38 Aligned_cols=104 Identities=19% Similarity=0.079 Sum_probs=88.5
Q ss_pred cceehhhH-HHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCC
Q 019306 184 APFVAVGL-LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH 262 (343)
Q Consensus 184 ~kf~imGl-lDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~ 262 (343)
+++++.|. .-.+...+.+.|..|++.....++.+....++++++.+++|+|.+..|++|+.+.++|+++...++.
T Consensus 47 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~---- 122 (260)
T TIGR00950 47 LRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN---- 122 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc----
Confidence 34566664 5788889999999999999999999999999999999999999999999999999999988764431
Q ss_pred CCCCcchHHHHHHHHHhHHHHHHHHHHHHHh
Q 019306 263 SLKGAGIFWSLLMIVSFLLQAADTVLKEVIF 293 (343)
Q Consensus 263 s~~~~~vlw~lL~ilS~ip~A~SnV~kE~~F 293 (343)
.+....|+++.++|.+..|+.+++.-+..
T Consensus 123 --~~~~~~G~~~~l~a~~~~a~~~~~~k~~~ 151 (260)
T TIGR00950 123 --LSINPAGLLLGLGSGISFALGTVLYKRLV 151 (260)
T ss_pred --ccccHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 12446799999999999999999977653
No 15
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.18 E-value=1.2e-05 Score=73.46 Aligned_cols=166 Identities=22% Similarity=0.190 Sum_probs=113.0
Q ss_pred HHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceeh-hhHHHHHHH
Q 019306 119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVA-VGLLEALAA 197 (343)
Q Consensus 119 i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~i-mGllDal~~ 197 (343)
+..+..-+....+....|...+. +.|.+...+......... .+...+.... .+.....++++.++ -++..+.+.
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 84 (292)
T COG0697 10 LALLLWGLLWGLSFIALKLAVES--LDPFLFAAALRFLIAALL-LLPLLLLEPR--GLRPALRPWLLLLLLALLGLALPF 84 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHH-HHHHHHhhcc--cccccccchHHHHHHHHHHHHHHH
Confidence 33344445566677777777665 455444443222222211 1111111110 00111112233344 457788899
Q ss_pred HHHHhhcccccccHHHHhccchHHHHHHHHH-HHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcchHHHHHHH
Q 019306 198 ATGMAAGAILSGASIPILSQTFLVWQILLSI-IFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMI 276 (343)
Q Consensus 198 ~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~-ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~vlw~lL~i 276 (343)
.+.+.+..|++.....++......++.+++. +++|+|.+..++.|.++..+|++++..++...... ...++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~----~~~g~~~~l 160 (292)
T COG0697 85 LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL----SLLGLLLAL 160 (292)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH----HHHHHHHHH
Confidence 9999999999999999999999999999996 77799999999999999999999998875432111 578999999
Q ss_pred HHhHHHHHHHHHHHHHh
Q 019306 277 VSFLLQAADTVLKEVIF 293 (343)
Q Consensus 277 lS~ip~A~SnV~kE~~F 293 (343)
++.+..|+.+++.++..
T Consensus 161 ~a~~~~a~~~~~~~~~~ 177 (292)
T COG0697 161 AAALLWALYTALVKRLS 177 (292)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999863
No 16
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.16 E-value=1.6e-06 Score=83.98 Aligned_cols=176 Identities=20% Similarity=0.216 Sum_probs=109.0
Q ss_pred HHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehhhHHHHHHHH
Q 019306 119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAA 198 (343)
Q Consensus 119 i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~imGllDal~~~ 198 (343)
+..+..|..|++..+.+--.+.+...-..-+-.+.+|.|+...+.+..-+.+.- ...+|-+.|+++-.+=-..|.
T Consensus 5 ~~ai~~vf~GCcsnvv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~-----k~kiplk~Y~i~V~mFF~vnv 79 (330)
T KOG1583|consen 5 AAAISLVFGGCCSNVVFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTV-----KPKIPLKDYAITVAMFFIVNV 79 (330)
T ss_pred HHHHHHHHHhhhchHHHHHHHHHhCCCCeeehHHHHHHHHHHhceeeecccccc-----CCCCchhhhheehheeeeeee
Confidence 344555555555444443333332222223334555777766654443222111 133454445444322222333
Q ss_pred HHHhhcc-cccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCC----C-----CCCcc
Q 019306 199 TGMAAGA-ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH----S-----LKGAG 268 (343)
Q Consensus 199 L~viA~~-ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~----s-----~~~~~ 268 (343)
.-..|.. ..|.++-.+.+......+|+++++++||||+..||..++++.+|+++.-.-.+..+. + ..+..
T Consensus 80 ~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~ 159 (330)
T KOG1583|consen 80 TNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDF 159 (330)
T ss_pred eccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccc
Confidence 3333444 578888899999999999999999999999999999999999998887553211110 0 01111
Q ss_pred ---hHHHHHHHHHhHHHHHHHHHHHHHhHHHHHh
Q 019306 269 ---IFWSLLMIVSFLLQAADTVLKEVIFLDAAQR 299 (343)
Q Consensus 269 ---vlw~lL~ilS~ip~A~SnV~kE~~F~~~~~~ 299 (343)
.+|..+..++.+..|..-.|+|...++|-|.
T Consensus 160 ~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh 193 (330)
T KOG1583|consen 160 FWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH 193 (330)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4567888899999999999999998887543
No 17
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=98.05 E-value=4.9e-06 Score=83.38 Aligned_cols=132 Identities=29% Similarity=0.258 Sum_probs=111.3
Q ss_pred hhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCC-CCCCc
Q 019306 189 VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH-SLKGA 267 (343)
Q Consensus 189 mGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~-s~~~~ 267 (343)
...+=.++|+....|+.||+..++.+|+-++=-||+.++.+|...|+++.+.+++++.++|++++...++.+.. ..+++
T Consensus 165 fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~ 244 (416)
T KOG2765|consen 165 FCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASR 244 (416)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccc
Confidence 45556679999999999999999999999999999999999999999999999999999999999988765432 24567
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeeehhhhHHHHhhhh
Q 019306 268 GIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQDVMVHRC 324 (343)
Q Consensus 268 ~vlw~lL~ilS~ip~A~SnV~kE~~F~~~~~~LK~~ldif~vns~~s~fQ~ifv~~~ 324 (343)
..+|+++-++|++.||+=.|.--+--.+ -.+++|+=.+-|++++|.++..+|.
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~~~~~----eg~rvdi~lffGfvGLfnllllwP~ 297 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKRKIGD----EGERVDIQLFFGFVGLFNLLLLWPP 297 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccc----ccccccHHHHHHHHHHHHHHHHhHH
Confidence 7999999999999999987764432111 1135999999999999999998873
No 18
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.99 E-value=1.6e-05 Score=77.11 Aligned_cols=144 Identities=19% Similarity=0.215 Sum_probs=106.7
Q ss_pred Ccceehh-hHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec----C
Q 019306 183 KAPFVAV-GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS----G 257 (343)
Q Consensus 183 k~kf~im-GllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s----g 257 (343)
+++++++ |+.-..|-.+++.|+.|.|.+=..+...++-.+|.++++++||.||+.++-+|..+.+.|+++.+=| |
T Consensus 96 ~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG 175 (346)
T KOG4510|consen 96 KRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFG 175 (346)
T ss_pred cEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccC
Confidence 5666665 8889999999999999999999999999999999999999999999999999999999999998877 3
Q ss_pred CCCC--CC-CCCcchHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCC-CCeEEEeeehhhhHHHHhhhhcccccceee
Q 019306 258 SNPG--HS-LKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGG-VDLFVVNSYGSAFQDVMVHRCSHCCLFLST 333 (343)
Q Consensus 258 s~~g--~s-~~~~~vlw~lL~ilS~ip~A~SnV~kE~~F~~~~~~LK~~-ldif~vns~~s~fQ~ifv~~~s~~~~~l~~ 333 (343)
+... ++ ..+....+...-+.|..+.|--.++-.++ || .|.+.-.++-++--.+-.+.. |.-++-
T Consensus 176 ~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~i---------Gk~~h~~msvsyf~~i~lV~s~I~---~~~ig~ 243 (346)
T KOG4510|consen 176 DTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYI---------GKNAHAIMSVSYFSLITLVVSLIG---CASIGA 243 (346)
T ss_pred CCccccccccccccCCchHHHHHhHhhhhhHHHHHHHh---------hccccEEEEehHHHHHHHHHHHHH---Hhhccc
Confidence 3221 11 11334555677777777666544444432 34 888877776665554444332 566667
Q ss_pred cccce
Q 019306 334 WVLTY 338 (343)
Q Consensus 334 ~~~~~ 338 (343)
|-+|.
T Consensus 244 ~~lP~ 248 (346)
T KOG4510|consen 244 VQLPH 248 (346)
T ss_pred eecCc
Confidence 77773
No 19
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.97 E-value=2.7e-05 Score=74.39 Aligned_cols=102 Identities=19% Similarity=0.261 Sum_probs=78.0
Q ss_pred ehhhHHHHHHH-HHHHhhccc-ccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCC
Q 019306 187 VAVGLLEALAA-ATGMAAGAI-LSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSL 264 (343)
Q Consensus 187 ~imGllDal~~-~L~viA~~y-tsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~ 264 (343)
+..|++-.... .+.+.+..| +|.....++.+...+++++++++++|+|.+..|++|+++.++|+.+...++.++
T Consensus 62 ~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~---- 137 (299)
T PRK11453 62 LGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG---- 137 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC----
Confidence 33455433333 344567777 466677888999999999999999999999999999999999988776442211
Q ss_pred CCcchHHHHHHHHHhHHHHHHHHHHHHH
Q 019306 265 KGAGIFWSLLMIVSFLLQAADTVLKEVI 292 (343)
Q Consensus 265 ~~~~vlw~lL~ilS~ip~A~SnV~kE~~ 292 (343)
.+....++++.+++.+..|+.+++..+.
T Consensus 138 ~~~~~~G~~l~l~aal~~a~~~v~~~~~ 165 (299)
T PRK11453 138 QHVAMLGFMLTLAAAFSWACGNIFNKKI 165 (299)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223579999999999999999998875
No 20
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.81 E-value=4.8e-05 Score=72.01 Aligned_cols=102 Identities=10% Similarity=0.008 Sum_probs=82.5
Q ss_pred cceehh-hHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCC
Q 019306 184 APFVAV-GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH 262 (343)
Q Consensus 184 ~kf~im-GllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~ 262 (343)
|.+++. |...+....+...|+++++......+.....+++++++++++|+|.+..|++|+.++++|+.+...++.. +
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~-~- 140 (281)
T TIGR03340 63 WLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA-Q- 140 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc-c-
Confidence 344444 5568888899999999999999999999999999999999999999999999999999999876654321 1
Q ss_pred CCCCcchHHHHHHHHHhHHHHHHHHHHHH
Q 019306 263 SLKGAGIFWSLLMIVSFLLQAADTVLKEV 291 (343)
Q Consensus 263 s~~~~~vlw~lL~ilS~ip~A~SnV~kE~ 291 (343)
....+.++.+++.+.+|+.+++..+
T Consensus 141 ----~~~~g~~~~l~aal~~a~~~i~~k~ 165 (281)
T TIGR03340 141 ----HRRKAYAWALAAALGTAIYSLSDKA 165 (281)
T ss_pred ----cchhHHHHHHHHHHHHHHhhhhccc
Confidence 1234556788899999998886554
No 21
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.79 E-value=1.7e-05 Score=63.87 Aligned_cols=70 Identities=31% Similarity=0.394 Sum_probs=63.5
Q ss_pred cceehhhHH-HHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEE
Q 019306 184 APFVAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (343)
Q Consensus 184 ~kf~imGll-Dal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~ 253 (343)
...++.|.+ -+.+..+.+.|..+++.+...++.....+++++++++++|+|.+..|++|+.++++|+++.
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 54 LWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 346667877 4999999999999999999999999999999999999999999999999999999997653
No 22
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.79 E-value=0.00014 Score=69.49 Aligned_cols=161 Identities=12% Similarity=0.035 Sum_probs=100.6
Q ss_pred HHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehhhHHHHHHH-HH
Q 019306 121 AAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAA-AT 199 (343)
Q Consensus 121 ~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~imGllDal~~-~L 199 (343)
.++.+++-..|-+..|...+.+. |+.+..+-...-.++.+++ .+ +. + .+ ..+|+.++.|.+-.... .+
T Consensus 9 ~l~a~~~Wg~~~~~~k~~~~~~~--P~~~~~~R~~~a~l~l~~~--~~-~~----~-~~-~~~~~~~~~~~l~~~~~~~~ 77 (295)
T PRK11689 9 GLIAILLWSTMVGLIRGVSESLG--PVGGAAMIYSVSGLLLLLT--VG-FP----R-LR-QFPKRYLLAGGLLFVSYEIC 77 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHccCC--hHHHHHHHHHHHHHHHHHH--cc-cc----c-cc-cccHHHHHHHhHHHHHHHHH
Confidence 33344445577888998877543 3333333221111111111 11 11 1 01 11345566666543333 33
Q ss_pred HHhhcc----cccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCC-C-CC--CCCCcchHH
Q 019306 200 GMAAGA----ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSN-P-GH--SLKGAGIFW 271 (343)
Q Consensus 200 ~viA~~----ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~-~-g~--s~~~~~vlw 271 (343)
.+.|.. +++.....++......++++++++++|+|.+..|++|+++.++|+.+...++.+ + ++ ...+....|
T Consensus 78 ~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G 157 (295)
T PRK11689 78 LALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLS 157 (295)
T ss_pred HHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHH
Confidence 444544 456666688999999999999999999999999999999999999887765321 1 00 011234569
Q ss_pred HHHHHHHhHHHHHHHHHHHHH
Q 019306 272 SLLMIVSFLLQAADTVLKEVI 292 (343)
Q Consensus 272 ~lL~ilS~ip~A~SnV~kE~~ 292 (343)
+++.++|.+..|+.+++-++.
T Consensus 158 ~~~~l~aa~~~A~~~v~~k~~ 178 (295)
T PRK11689 158 YGLAFIGAFIWAAYCNVTRKY 178 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999998874
No 23
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.75 E-value=6.3e-05 Score=71.93 Aligned_cols=92 Identities=17% Similarity=0.098 Sum_probs=77.8
Q ss_pred hHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcch
Q 019306 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (343)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~v 269 (343)
++.=+.+..+.+.|..++|.....++..+.-.++++++++|+|+|.++.|++|+++.++|+++...++. +.
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-------~~-- 150 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-------SL-- 150 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-------Cc--
Confidence 355666788899999999999999999999999999999999999999999999999999988664321 11
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHH
Q 019306 270 FWSLLMIVSFLLQAADTVLKEVI 292 (343)
Q Consensus 270 lw~lL~ilS~ip~A~SnV~kE~~ 292 (343)
+++.++|++.+|+.+++.++.
T Consensus 151 --~~~~l~aa~~~a~~~i~~r~~ 171 (296)
T PRK15430 151 --PIIALGLAFSFAFYGLVRKKI 171 (296)
T ss_pred --cHHHHHHHHHHHHHHHHHHhc
Confidence 246788899999999887763
No 24
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.75 E-value=0.00015 Score=69.09 Aligned_cols=164 Identities=14% Similarity=0.152 Sum_probs=108.9
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehhhHHH-
Q 019306 115 VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLE- 193 (343)
Q Consensus 115 ~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~imGllD- 193 (343)
+.+..+.+.+.+.=..|-+..|...+.+..... ..+-...-.++.+++...+ +.+.-+++ ++.++++.|.+-
T Consensus 7 ~~~~~~~~~~~~iWg~~~~~~K~~~~~~~p~~~--~~~R~~~a~l~ll~~~~~~-~~~~~~~~----~~~~~~~~g~~~~ 79 (292)
T PRK11272 7 LPLFGALFALYIIWGSTYLVIRIGVESWPPLMM--AGVRFLIAGILLLAFLLLR-GHPLPTLR----QWLNAALIGLLLL 79 (292)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhccCCHHHH--HHHHHHHHHHHHHHHHHHh-CCCCCcHH----HHHHHHHHHHHHH
Confidence 445556666666667799999988875544332 2221111111122222222 11110111 123456677654
Q ss_pred HHHHHHHHhhc-ccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcchHHH
Q 019306 194 ALAAATGMAAG-AILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWS 272 (343)
Q Consensus 194 al~~~L~viA~-~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~vlw~ 272 (343)
+.+..+.+.|. .+++.....++......++++++.+ +|+|.++.|++|+++.++|+.+....+. . +....|+
T Consensus 80 ~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~-----~-~~~~~G~ 152 (292)
T PRK11272 80 AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN-----L-SGNPWGA 152 (292)
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc-----c-ccchHHH
Confidence 45677778888 8898888899999999999999985 6999999999999999999887543211 1 2335799
Q ss_pred HHHHHHhHHHHHHHHHHHHH
Q 019306 273 LLMIVSFLLQAADTVLKEVI 292 (343)
Q Consensus 273 lL~ilS~ip~A~SnV~kE~~ 292 (343)
++.++|.+..|+.+++.++.
T Consensus 153 l~~l~a~~~~a~~~~~~~~~ 172 (292)
T PRK11272 153 ILILIASASWAFGSVWSSRL 172 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999987763
No 25
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.71 E-value=0.0001 Score=68.52 Aligned_cols=96 Identities=16% Similarity=0.112 Sum_probs=80.0
Q ss_pred eehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCC
Q 019306 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLK 265 (343)
Q Consensus 186 f~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~ 265 (343)
..+.|.+=+.+..+.+.|..|++.....++.++.-.|+++++.+++|+|.++.|++|+++.++|+++...++.
T Consensus 73 ~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~------- 145 (256)
T TIGR00688 73 LLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG------- 145 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-------
Confidence 4456777778889999999999999999999999999999999999999999999999999999887654311
Q ss_pred CcchHHHHHHHHHhHHHHHHHHHHHHH
Q 019306 266 GAGIFWSLLMIVSFLLQAADTVLKEVI 292 (343)
Q Consensus 266 ~~~vlw~lL~ilS~ip~A~SnV~kE~~ 292 (343)
+. .++.+++.+.+|+.++..++.
T Consensus 146 ~~----~~~~l~aa~~~a~~~i~~~~~ 168 (256)
T TIGR00688 146 SL----PWEALVLAFSFTAYGLIRKAL 168 (256)
T ss_pred Cc----hHHHHHHHHHHHHHHHHHhhc
Confidence 11 135678899999988887763
No 26
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.34 E-value=0.00042 Score=67.63 Aligned_cols=197 Identities=16% Similarity=0.214 Sum_probs=138.3
Q ss_pred CcchHHHHHHHHHHHhhhhhHHHHHHHhC--CCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehh
Q 019306 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALV--PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAV 189 (343)
Q Consensus 112 ~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~--~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~im 189 (343)
.+-....++..+....=..|-++.-+..+ .++.|.|+++..+...|.......+ ..+.++.+..|++-|.++
T Consensus 39 pkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~------~~~~~k~r~iP~rtY~~l 112 (367)
T KOG1582|consen 39 PKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIEL------QLIQTKRRVIPWRTYVIL 112 (367)
T ss_pred chhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEE------EeecccceecchhHhhhh
Confidence 34444556665555555566666666655 4568999999988887765332211 113345677899999999
Q ss_pred hHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcch
Q 019306 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (343)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~v 269 (343)
+++-+-..-|..-...|++=+-|.+.-+.-+.=+|+-..++=++||.+.++..+.+..+|++.--..|+...+ .=..
T Consensus 113 a~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sP---NF~~ 189 (367)
T KOG1582|consen 113 AFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSP---NFNL 189 (367)
T ss_pred HhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCC---Ccce
Confidence 9998888888888888999999999999998889999999999999999999999999999887666543322 2234
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeeehhhhHHHHh
Q 019306 270 FWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQDVMV 321 (343)
Q Consensus 270 lw~lL~ilS~ip~A~SnV~kE~~F~~~~~~LK~~ldif~vns~~s~fQ~ifv 321 (343)
.|..++-.+-+..|+--=.||+.|+++ ++.-...++-+++-.+-++|+
T Consensus 190 ~Gv~mIsgALl~DA~iGNvQEk~m~~~----~~ss~EmvfySy~iG~vflf~ 237 (367)
T KOG1582|consen 190 IGVMMISGALLADAVIGNVQEKAMKMN----PASSSEMVFYSYGIGFVFLFA 237 (367)
T ss_pred eeHHHHHHHHHHHHHhhHHHHHHHhhC----CCCcceEEEeeecccHHHHHH
Confidence 555555555666777666799998764 333334444444444444444
No 27
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.21 E-value=0.0011 Score=58.15 Aligned_cols=131 Identities=22% Similarity=0.256 Sum_probs=89.7
Q ss_pred HHHHHHHHhhhhhHHHHHHHhCCCC-ChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehh-hHHHHHH
Q 019306 119 IAAAVTVLLGVGNRVLYKLALVPLK-HYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAV-GLLEALA 196 (343)
Q Consensus 119 i~~i~~Vi~Gv~N~Vl~Kl~~~~~~-nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~im-GllDal~ 196 (343)
++.++--.+.....++.|+-.+.+- +...+. -+.+-......+++ .++.-..+.| .+-+.|-|+++ |+.-.++
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~I---RtiVi~~~l~~v~~-~~g~~~~~~~-~~~k~~lflilSGla~gls 80 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGLEGVDPDFATTI---RTIVILIFLLIVLL-VTGNWQAGGE-IGPKSWLFLILSGLAGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCccHHHHH---HHHHHHHHHHHHHH-hcCceecccc-cCcceehhhhHHHHHHHHH
Confidence 3444455566778899999888543 333333 33221111111121 2222111111 22234667777 5668888
Q ss_pred HHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEe
Q 019306 197 AATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (343)
Q Consensus 197 ~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v 254 (343)
-++-+.|...=..+...-++-..+.++.++|++|||.|.+..+++|+.++++|.+++.
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 8889999998888888999999999999999999999999999999999999988764
No 28
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.15 E-value=0.00064 Score=66.34 Aligned_cols=74 Identities=24% Similarity=0.427 Sum_probs=65.8
Q ss_pred ceehhh-HHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCC
Q 019306 185 PFVAVG-LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGS 258 (343)
Q Consensus 185 kf~imG-llDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs 258 (343)
+..+.| +++++|..+.+.|+.+.|.++.+-|....++++++++.++||+|.+..+++|+.++++|.++.+..+.
T Consensus 51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~ 125 (300)
T PF05653_consen 51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP 125 (300)
T ss_pred HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence 344555 45889999999999999999999999999999999999999999999999999999999887776543
No 29
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.03 E-value=0.0002 Score=68.70 Aligned_cols=171 Identities=16% Similarity=0.219 Sum_probs=115.3
Q ss_pred cCcchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehhh
Q 019306 111 NDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVG 190 (343)
Q Consensus 111 ~~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~imG 190 (343)
..+.+. ....++-+-.++|.|+.|.... +|. +.|..+.|-|-|+.-+
T Consensus 46 ~~E~FT--falaLVf~qC~~N~vfAkvl~~--------------------------ir~-----~~~~D~t~~~~YaAcs 92 (337)
T KOG1580|consen 46 SIEKFT--FALALVFFQCTANTVFAKVLFL--------------------------IRK-----KTEIDNTPTKMYAACS 92 (337)
T ss_pred chheeh--HHHHHHHHHHHHHHHHHHhhee--------------------------ecc-----cccccCCcchHHHHHH
Confidence 344444 3344555567889998887644 121 1223455667777766
Q ss_pred HHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcchH
Q 019306 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIF 270 (343)
Q Consensus 191 llDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~vl 270 (343)
+--.++-.-..-|.+|+|-+-|.+=...--.=+|++-.+|+||.|++.+|.+++.+++|+++-..-...-++.....-.+
T Consensus 93 ~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~ 172 (337)
T KOG1580|consen 93 ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGF 172 (337)
T ss_pred HHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccch
Confidence 66666666677788898888765544444444789999999999999999999999999988776421111122344568
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeeehhhh
Q 019306 271 WSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAF 316 (343)
Q Consensus 271 w~lL~ilS~ip~A~SnV~kE~~F~~~~~~LK~~ldif~vns~~s~f 316 (343)
|-+|.++|-...++..+.||.+=..|+ + .+.--.++.|-|..++
T Consensus 173 GElLL~lSL~mDGlTg~~Qdrira~yq-~-~g~~MM~~~NlwStL~ 216 (337)
T KOG1580|consen 173 GELLLILSLAMDGLTGSIQDRIRASYQ-R-TGTSMMFYTNLWSTLY 216 (337)
T ss_pred HHHHHHHHHHhcccchhHHHHHHHhhc-c-CchhhHHHHHHHHHHH
Confidence 899999999999999999999744332 1 1123356667666543
No 30
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=96.97 E-value=0.0057 Score=58.43 Aligned_cols=157 Identities=12% Similarity=0.005 Sum_probs=96.2
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehhhHHHHHH
Q 019306 117 IVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALA 196 (343)
Q Consensus 117 v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~imGllDal~ 196 (343)
+..+.++++..+ .|.++.|...+.+.... +..+-...-.++.+.+ ..+.+. ..+++ .+++.++.|++-...
T Consensus 14 ~~~~~la~~~~~-~~~~~~K~~~~~~~~~~--~~~~R~~~a~l~l~~~-~~~~~~-~~~~~----~~~~~~~~g~~~~~~ 84 (293)
T PRK10532 14 ILLLLIAMASIQ-SGASLAKSLFPLVGAPG--VTALRLALGTLILIAI-FKPWRL-RFAKE----QRLPLLFYGVSLGGM 84 (293)
T ss_pred HHHHHHHHHHHH-hhHHHHHHHHHHcCHHH--HHHHHHHHHHHHHHHH-HhHHhc-cCCHH----HHHHHHHHHHHHHHH
Confidence 455666666666 56668998887433322 2222111101111111 111111 11111 123455678888888
Q ss_pred HHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcchHHHHHHH
Q 019306 197 AATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMI 276 (343)
Q Consensus 197 ~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~vlw~lL~i 276 (343)
+.+.+.|.+|+|.....++..+...++++++ ++|.+ +..++.+.++|+.+...++.+. ++....++++.+
T Consensus 85 ~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--~~~~~~i~~~Gv~li~~~~~~~----~~~~~~G~ll~l 154 (293)
T PRK10532 85 NYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--DFVWVVLAVLGLWFLLPLGQDV----SHVDLTGAALAL 154 (293)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--HHHHHHHHHHHHheeeecCCCc----ccCChHHHHHHH
Confidence 8899999999999988888877777777766 35544 4556777788887766443221 123467999999
Q ss_pred HHhHHHHHHHHHHHHH
Q 019306 277 VSFLLQAADTVLKEVI 292 (343)
Q Consensus 277 lS~ip~A~SnV~kE~~ 292 (343)
++.+.+|+.+++-.+.
T Consensus 155 ~aa~~~a~~~v~~r~~ 170 (293)
T PRK10532 155 GAGACWAIYILSGQRA 170 (293)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999986664
No 31
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=96.81 E-value=0.012 Score=56.67 Aligned_cols=102 Identities=21% Similarity=0.127 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHhhcccccccHHHHhcc-chHHHHHHHHHHHhccccceee----eehhheeeeeeeEEeecCCCCCCCC
Q 019306 190 GLLEALAAATGMAAGAILSGASIPILSQ-TFLVWQILLSIIFLGRRYRVNQ----LFGCFLVGIGVIITVASGSNPGHSL 264 (343)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~Q-~~IP~tmllS~ifLk~RY~~~q----i~G~~IVliGliv~v~sgs~~g~s~ 264 (343)
|++-+.+|++.+.|.+++..+....+.+ ....+..+++.+++|+|.+..+ ++|++++++|++++..++.++.+..
T Consensus 66 G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~ 145 (290)
T TIGR00776 66 GAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIK 145 (290)
T ss_pred HHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccc
Confidence 4558999999999999999999988888 6667899999999999999999 9999999999888876642221101
Q ss_pred -CCcchHHHHHHHHHhHHHHHHHHHHHH
Q 019306 265 -KGAGIFWSLLMIVSFLLQAADTVLKEV 291 (343)
Q Consensus 265 -~~~~vlw~lL~ilS~ip~A~SnV~kE~ 291 (343)
..+...+.++-++|.+.+|...+.-+.
T Consensus 146 ~~~~~~~Gi~~~l~sg~~y~~~~~~~~~ 173 (290)
T TIGR00776 146 SEFNFKKGILLLLMSTIGYLVYVVVAKA 173 (290)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 033467999999999999999888885
No 32
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=96.66 E-value=0.0056 Score=56.25 Aligned_cols=65 Identities=25% Similarity=0.311 Sum_probs=58.7
Q ss_pred eehhhHHH-HHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeee
Q 019306 186 FVAVGLLE-ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGV 250 (343)
Q Consensus 186 f~imGllD-al~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGl 250 (343)
.+..|.+. ..+..+.+.|..+++......+.....++++++++++++++.+..|++|+.+++.|+
T Consensus 194 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 194 LLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 45567664 678888899999999999999999999999999999999999999999999998886
No 33
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.55 E-value=0.025 Score=55.92 Aligned_cols=190 Identities=18% Similarity=0.227 Sum_probs=124.9
Q ss_pred cchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHH--HhhhhhhHhHHHHHHHHHhcCccchhhhcCC-Ccceehh
Q 019306 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQ--LATFGYVAVYFSILYLRYHAGIVTDEMLSMP-KAPFVAV 189 (343)
Q Consensus 113 ~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q--~~t~~yv~vyf~il~~r~~~~~it~eml~~P-k~kf~im 189 (343)
+..+-++..+.|.+....-++.-|..... .+||.++.- .|++..+++ ++...+.|-+.-|.++.. -||++.+
T Consensus 9 ~~~~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~----v~~lk~~~lv~~~~l~~~~~kk~~P~ 83 (314)
T KOG1444|consen 9 KQSSPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLV----VLVLKRLGLVNFRPLDLRTAKKWFPV 83 (314)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHH----HHHHHHhceeecCCcChHHHHHHccH
Confidence 33445677888888888888999988763 355544443 444443321 222233344433322222 1566677
Q ss_pred hHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcch
Q 019306 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (343)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~v 269 (343)
.++=...-+.+..+.+|.+.++..+++..++..+++.=..|+|+|.+..-+..++..++|-.+...++. +....+.
T Consensus 84 ~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~----sf~~~gY 159 (314)
T KOG1444|consen 84 SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL----SFNLRGY 159 (314)
T ss_pred HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc----eecchhH
Confidence 888888888999999999999999999999999999999999999999988888888877766665532 1222234
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCC-CCeEEEeeehhhhHHHHh
Q 019306 270 FWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGG-VDLFVVNSYGSAFQDVMV 321 (343)
Q Consensus 270 lw~lL~ilS~ip~A~SnV~kE~~F~~~~~~LK~~-ldif~vns~~s~fQ~ifv 321 (343)
.|. ++.++..|.-.++-++. .+.+ ++-+-+..+.+++-....
T Consensus 160 ~w~---~~n~~~~a~~~v~~kk~-------vd~~~l~~~~lv~yNnl~~L~~l 202 (314)
T KOG1444|consen 160 SWA---LANCLTTAAFVVYVKKS-------VDSANLNKFGLVFYNNLLSLPPL 202 (314)
T ss_pred HHH---HHHHHHHHHHHHHHHHh-------hccccccceeEEeehhHHHHHHH
Confidence 554 44555566666666653 2222 555666665555554444
No 34
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=96.36 E-value=0.0087 Score=50.79 Aligned_cols=68 Identities=26% Similarity=0.375 Sum_probs=61.7
Q ss_pred ceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeE
Q 019306 185 PFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (343)
Q Consensus 185 kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv 252 (343)
.+++.|++=..-|+..+....+|++...++++..--+.+.++|.++++.+.+..|++|..++++|..+
T Consensus 83 ~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 83 LLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 35556777888888889999999999999999999999999999999999999999999999999764
No 35
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=96.31 E-value=0.022 Score=56.43 Aligned_cols=169 Identities=15% Similarity=0.212 Sum_probs=119.3
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCC----cceehhhHHH
Q 019306 118 VIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPK----APFVAVGLLE 193 (343)
Q Consensus 118 ~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk----~kf~imGllD 193 (343)
+.+++++-.+..+=+-.+|-.... .+||-|.+.++..+-. .|+.+..+-+....++.-..+.| ++.+.-|++-
T Consensus 18 L~lVl~yY~~Si~Ltf~~~~~~~~-f~fPLf~ts~h~~v~f--lfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat 94 (349)
T KOG1443|consen 18 LALVLLYYFLSIGLTFYFKWLTKN-FHFPLFVTSLHLAVKF--LFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT 94 (349)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcC-cCCchHHHHHHHHHHH--HHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh
Confidence 334455656665556666655443 7899999887764322 23444333222223332223333 2344557777
Q ss_pred HHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcchHHHH
Q 019306 194 ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSL 273 (343)
Q Consensus 194 al~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~vlw~l 273 (343)
+.---+...+..|++.+.+.|-.-++|.|.+++|.+|-=.|+++.=.+=++++.+|+++...-.+ +-.+.|-+
T Consensus 95 a~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT-------qf~i~Gf~ 167 (349)
T KOG1443|consen 95 ALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST-------QFNIEGFF 167 (349)
T ss_pred hcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc-------ceeehhHH
Confidence 77777899999999999999999999999999999998888888777777788888888776422 23467888
Q ss_pred HHHHHhHHHHHHHHHHHHHhHHH
Q 019306 274 LMIVSFLLQAADTVLKEVIFLDA 296 (343)
Q Consensus 274 L~ilS~ip~A~SnV~kE~~F~~~ 296 (343)
++..+....++-=++-.++.+|.
T Consensus 168 lv~~aS~~sGlRW~~tQ~ll~~~ 190 (349)
T KOG1443|consen 168 LVLAASLLSGLRWAFTQMLLRNQ 190 (349)
T ss_pred HHHHHHHhhhhhHHHHHHHHhcC
Confidence 99999999999999999988774
No 36
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=95.90 E-value=0.012 Score=56.63 Aligned_cols=135 Identities=19% Similarity=0.178 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccc---hhhhcCCC--cceehhh
Q 019306 116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVT---DEMLSMPK--APFVAVG 190 (343)
Q Consensus 116 ~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it---~eml~~Pk--~kf~imG 190 (343)
-++++.+.+ +++....+..|...++.+..++-+-..++..-++..+.....-. .+... +-..+-|. +..++.+
T Consensus 155 G~~ll~~sl-~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~~~~~~~f~~~~p~~~~~l~~~s 232 (303)
T PF08449_consen 155 GIILLLLSL-LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGEFRSAIRFISAHPSVLLYLLLFS 232 (303)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhHhhHHHHHHHHhHHHHHHHHHHH
Confidence 344444444 44555666777777766666643333333221222221111100 11000 00112222 3345567
Q ss_pred HHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeE
Q 019306 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (343)
Q Consensus 191 llDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv 252 (343)
++-++++...+.-...+++....+....--+.++++|.++.+++++..||+|++++++|+.+
T Consensus 233 ~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~ 294 (303)
T PF08449_consen 233 LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFL 294 (303)
T ss_pred HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHH
Confidence 78888888888777788888899999999999999999999999999999999999988765
No 37
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.78 E-value=0.04 Score=54.18 Aligned_cols=108 Identities=14% Similarity=0.170 Sum_probs=84.9
Q ss_pred cccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcchHHHHHHHHHhHHHH
Q 019306 204 GAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQA 283 (343)
Q Consensus 204 ~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~vlw~lL~ilS~ip~A 283 (343)
+.|.+.+-+++=+....||++++++.+||.|=+..-+.||+++++|..+ |.+.+++.+.-.+.|.++-++|++.-|
T Consensus 123 L~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l----GvdqE~~~~~ls~~GvifGVlaSl~vA 198 (347)
T KOG1442|consen 123 LKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL----GVDQEGSTGTLSWIGVIFGVLASLAVA 198 (347)
T ss_pred hhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee----ccccccccCccchhhhHHHHHHHHHHH
Confidence 4588888888999999999999999999999999999999999999776 555555566778899999999999999
Q ss_pred HHHHHHHHHhHHHHHhhcCC-CC-eEEEeeehhhhHHHHhhh
Q 019306 284 ADTVLKEVIFLDAAQRLKGG-VD-LFVVNSYGSAFQDVMVHR 323 (343)
Q Consensus 284 ~SnV~kE~~F~~~~~~LK~~-ld-if~vns~~s~fQ~ifv~~ 323 (343)
+-.++-.+.. ++ .| +|.+..+.+++-.+.-+|
T Consensus 199 lnaiytkk~l--------~~v~~~iw~lt~ynnv~a~lLflp 232 (347)
T KOG1442|consen 199 LNAIYTKKVL--------PPVGDCIWRLTAYNNVNALLLFLP 232 (347)
T ss_pred HHHHhhheec--------ccccCeehhhHHHHHHHHHHHHHH
Confidence 8888766432 23 45 566666666665544433
No 38
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.70 E-value=0.012 Score=53.89 Aligned_cols=107 Identities=18% Similarity=0.065 Sum_probs=71.3
Q ss_pred hhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCc
Q 019306 188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGA 267 (343)
Q Consensus 188 imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~ 267 (343)
+++..=...+.+...+..+..+.-.+.. |.-+..+++++...+++|.+..|+.+......|+.++-...........++
T Consensus 4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~ 82 (222)
T TIGR00803 4 VPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN 82 (222)
T ss_pred ccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence 3444445556666666666666666666 777788888888888888888888776666666554433221111112345
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 019306 268 GIFWSLLMIVSFLLQAADTVLKEVIFLD 295 (343)
Q Consensus 268 ~vlw~lL~ilS~ip~A~SnV~kE~~F~~ 295 (343)
.+.+....+.++...++..+|+|+.+|+
T Consensus 83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~ 110 (222)
T TIGR00803 83 PVVGLSAVLSALLSSGFAGVYFEKILKD 110 (222)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHcccC
Confidence 6677777888889999999999998664
No 39
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=95.54 E-value=0.01 Score=56.23 Aligned_cols=68 Identities=28% Similarity=0.440 Sum_probs=60.4
Q ss_pred ceehh-hHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeE
Q 019306 185 PFVAV-GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (343)
Q Consensus 185 kf~im-GllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv 252 (343)
..+.+ ++....+..+.+.|.++.+.+....+.+...++..+++++++|++.+..|++|..++++|+.+
T Consensus 212 ~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 212 PSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 33444 466788888999999999999999999999999999999999999999999999999999764
No 40
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.91 E-value=0.036 Score=55.14 Aligned_cols=70 Identities=20% Similarity=0.315 Sum_probs=61.0
Q ss_pred ehhhHH-HHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec
Q 019306 187 VAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (343)
Q Consensus 187 ~imGll-Dal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s 256 (343)
...|++ =.+|.+.-+.||.+-|.++..-|....++.+.+++.+|||+|.+..-.+||++|++|-.+.+.-
T Consensus 67 Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 67 WWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 344533 4568888899999999999999999999999999999999999999999999999996666653
No 41
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=94.42 E-value=0.012 Score=49.34 Aligned_cols=64 Identities=13% Similarity=0.048 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEe
Q 019306 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (343)
Q Consensus 191 llDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v 254 (343)
.+-..+.++...+....|.+....+-+....++++++++++|.|.+..|++|+.++++|+++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3455677777788888888887666679999999999999999999999999999999987643
No 42
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=93.88 E-value=0.19 Score=48.07 Aligned_cols=70 Identities=20% Similarity=0.157 Sum_probs=60.3
Q ss_pred ehhhHHH-HHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec
Q 019306 187 VAVGLLE-ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (343)
Q Consensus 187 ~imGllD-al~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s 256 (343)
+.+|.+- +.+..+.+.|.++++.+...++.....++.+++++++++++.+..|++|+.++++|++.....
T Consensus 212 l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 212 LAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 4567664 455557799999999999999999999999999999999999999999999999887765433
No 43
>PRK11689 aromatic amino acid exporter; Provisional
Probab=93.64 E-value=0.086 Score=50.44 Aligned_cols=70 Identities=11% Similarity=-0.005 Sum_probs=62.1
Q ss_pred ehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec
Q 019306 187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (343)
Q Consensus 187 ~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s 256 (343)
+..|+.-.++.++.+.+.++++++...++.-...++.+++++++|+++.+..|++|++++++|+.+....
T Consensus 219 ~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 219 LLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 4456667778888899999999999999999999999999999999999999999999999998776543
No 44
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=93.30 E-value=0.14 Score=51.22 Aligned_cols=68 Identities=12% Similarity=0.188 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec
Q 019306 189 VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (343)
Q Consensus 189 mGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s 256 (343)
.|..-.++-.+-+.+..+.+++-..+......++++++++++|+++.+..|++|++++++|+.++..+
T Consensus 262 ~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 262 MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 34444555566677888999999999999999999999999999999999999999999999886543
No 45
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=93.13 E-value=0.25 Score=45.10 Aligned_cols=67 Identities=13% Similarity=0.155 Sum_probs=60.6
Q ss_pred eehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeE
Q 019306 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (343)
Q Consensus 186 f~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv 252 (343)
...+.++-+.++.+......|.+.....+....-+.++.++|+++.+...+..|++|+.+|+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 4456677888889988888899999999999999999999999999999999999999999999865
No 46
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=92.68 E-value=0.19 Score=45.83 Aligned_cols=70 Identities=27% Similarity=0.385 Sum_probs=61.5
Q ss_pred ceehhhHHHH-HHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEe
Q 019306 185 PFVAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (343)
Q Consensus 185 kf~imGllDa-l~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v 254 (343)
.....|++.. ++.++...+....+.....++....+++.+++++++++++.+..|++|+.++++|+.+..
T Consensus 216 ~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 216 LLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 4566677777 699999999999999999999988899999999999999999999999999888876543
No 47
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=91.84 E-value=0.28 Score=48.57 Aligned_cols=62 Identities=11% Similarity=0.083 Sum_probs=52.6
Q ss_pred HHHHHHHHHH----HhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeE
Q 019306 191 LLEALAAATG----MAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (343)
Q Consensus 191 llDal~~~L~----viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv 252 (343)
++-.+..++. +.+..++++....+.+..--++++++++++++...+..|++|++++++|+++
T Consensus 280 ~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 280 FFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL 345 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence 3344444443 4588899999999999999999999999999999999999999999999764
No 48
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=91.25 E-value=0.097 Score=50.38 Aligned_cols=72 Identities=19% Similarity=0.140 Sum_probs=64.6
Q ss_pred cceehhhHHHHHHHHHHHhhcc-cccccHHHHhccchHHHHHHHHHHHhccccceeee----ehhheeeeeeeEEee
Q 019306 184 APFVAVGLLEALAAATGMAAGA-ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL----FGCFLVGIGVIITVA 255 (343)
Q Consensus 184 ~kf~imGllDal~~~L~viA~~-ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi----~G~~IVliGliv~v~ 255 (343)
|+-++.|++-..++.+.+.+.+ +.+.+...++.|.-.+...+++++++|++.+..|+ +|++++++|+++...
T Consensus 212 ~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 212 LLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 4455688888999999999999 99999999999999999999999999999999999 999999998877543
No 49
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=91.18 E-value=0.2 Score=47.43 Aligned_cols=116 Identities=17% Similarity=0.144 Sum_probs=87.7
Q ss_pred HHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCCCCCCCcchHHHH
Q 019306 194 ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSL 273 (343)
Q Consensus 194 al~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g~s~~~~~vlw~l 273 (343)
..+|++-..|+.-.+++...-+.+..--|+-+++++.||.|+...+++.+.+.+.|+++....|. .+ ..++++..
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN--~~---a~e~iGi~ 138 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN--EH---ADEIIGIA 138 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc--hh---hhhhhhHH
Confidence 45899999999999999999999999999999999999999999999999999999998876642 11 35688888
Q ss_pred HHHHHhHHHHHHHHHHHHHhHHHHHhhcCC--CCeEEEeeehhhhHHHHh
Q 019306 274 LMIVSFLLQAADTVLKEVIFLDAAQRLKGG--VDLFVVNSYGSAFQDVMV 321 (343)
Q Consensus 274 L~ilS~ip~A~SnV~kE~~F~~~~~~LK~~--ldif~vns~~s~fQ~ifv 321 (343)
..+.|+...|+--|.-... +.+. -|.-.+.+.-++|..+|.
T Consensus 139 ~AV~SA~~aAlYKV~FK~~-------iGnAn~Gdaa~FmS~LGF~NL~~~ 181 (290)
T KOG4314|consen 139 CAVGSAFMAALYKVLFKMF-------IGNANFGDAAHFMSCLGFFNLCFI 181 (290)
T ss_pred HHHHHHHHHHHHHHHHHHH-------hccCcchhHHHHHHHHHHHHHHHH
Confidence 8888888777655543332 2211 444444555555555554
No 50
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=91.16 E-value=0.077 Score=50.80 Aligned_cols=70 Identities=16% Similarity=0.228 Sum_probs=63.3
Q ss_pred ehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec
Q 019306 187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (343)
Q Consensus 187 ~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s 256 (343)
+..|..-+.+..+.+.|+++.+.+...++.-...++.+++++++++++.+..|++|+.++++|+.+...+
T Consensus 217 ~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 217 IAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3356678899999999999999999999999999999999999999999999999999998887776654
No 51
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=90.29 E-value=0.16 Score=43.52 Aligned_cols=72 Identities=15% Similarity=0.111 Sum_probs=63.5
Q ss_pred CcceehhhHHHHHHHHHHHhhcccccccHH-HHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEe
Q 019306 183 KAPFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (343)
Q Consensus 183 k~kf~imGllDal~~~L~viA~~ytsgs~~-~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v 254 (343)
.|+|+++=++...|.++-++....++.++. ++-|.....+|++..+++-++.-+...++|+.+++.|+.+++
T Consensus 41 n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lcv 113 (113)
T PF10639_consen 41 NPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALCV 113 (113)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeeeC
Confidence 478999889999999999999999999986 566899999999999877777777888999999999998763
No 52
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=89.92 E-value=0.094 Score=50.02 Aligned_cols=68 Identities=12% Similarity=0.026 Sum_probs=59.1
Q ss_pred eehhhHH-HHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEE
Q 019306 186 FVAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (343)
Q Consensus 186 f~imGll-Dal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~ 253 (343)
.+.+|++ -+.+..+.+.+.++.+.+...++.....++.+++++++++++.+..|++|++++++|+.+.
T Consensus 215 i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~ 283 (292)
T PRK11272 215 LGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV 283 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence 3444554 5677778888999999999999999999999999999999999999999999999988664
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=89.65 E-value=0.4 Score=41.53 Aligned_cols=115 Identities=15% Similarity=0.098 Sum_probs=68.2
Q ss_pred HHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehhh-HHHHHHH
Q 019306 119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVG-LLEALAA 197 (343)
Q Consensus 119 i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~imG-llDal~~ 197 (343)
++++.-+++++.-.++.|...+++++-+.....+.. .. .. .....+++.| .+-+++-
T Consensus 5 ~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~~~-~~----------~~-----------~~p~~~i~lgl~~~~la~ 62 (129)
T PRK02971 5 LWGLASVLLASVAQLSLKWGMSRLPLLSHAWDFIAA-LL----------AF-----------GLALRAVLLGLAGYALSM 62 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCccchhHHHHH-HH----------HH-----------hccHHHHHHHHHHHHHHH
Confidence 456666777888899999998877643322211000 00 00 0001123333 2344444
Q ss_pred HHHHhhcccccccHHHHhccchHHHHHHHHHH--HhccccceeeeehhheeeeeeeEEee
Q 019306 198 ATGMAAGAILSGASIPILSQTFLVWQILLSII--FLGRRYRVNQLFGCFLVGIGVIITVA 255 (343)
Q Consensus 198 ~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~i--fLk~RY~~~qi~G~~IVliGliv~v~ 255 (343)
++-..+....+.+...-+......++++.++. ++|++.+..|++|+.++++|++++..
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 55555555555555443333334566666664 89999999999999999999988654
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=87.56 E-value=0.72 Score=43.98 Aligned_cols=56 Identities=21% Similarity=0.237 Sum_probs=49.2
Q ss_pred HHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEE
Q 019306 198 ATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (343)
Q Consensus 198 ~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~ 253 (343)
.+.+.+..++++....+....--++++++++++++++.+..|++|..++++|+.+.
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~ 291 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY 291 (302)
T ss_pred HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence 45556788999999999988888888899999999999999999999999988664
No 55
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=86.86 E-value=0.23 Score=42.75 Aligned_cols=72 Identities=10% Similarity=0.139 Sum_probs=57.4
Q ss_pred ceehhhHHHHHHHHHHHhhcccccccH-HHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec
Q 019306 185 PFVAVGLLEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (343)
Q Consensus 185 kf~imGllDal~~~L~viA~~ytsgs~-~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s 256 (343)
++++.-.+=+++-++...+..+.|.+. +.+....-+..+.+.+.+|++.+.+..|++|..++++|++..-..
T Consensus 32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 445555566666677777777777776 466677889999999999999999999999999999999877544
No 56
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=86.03 E-value=4.4 Score=38.51 Aligned_cols=128 Identities=13% Similarity=0.139 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHH-HHHHhcCccchhhhcCCCc--ceehhhH
Q 019306 115 VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSIL-YLRYHAGIVTDEMLSMPKA--PFVAVGL 191 (343)
Q Consensus 115 ~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il-~~r~~~~~it~eml~~Pk~--kf~imGl 191 (343)
+-+...++..++.|.+....-|+.-. .+-|.+.-+++-+.|=+++..+. ..+. .+.+.++. -+.+| ...++-+
T Consensus 114 ~G~~~vl~~~~~S~~agVy~E~~lK~--~~~s~~~~N~qL~~~gi~~~~~~~~~~~-~~~~~~~g-~f~G~~~~~~~~i~ 189 (244)
T PF04142_consen 114 LGLLAVLAAAFLSGFAGVYFEKLLKR--SNVSLWIQNMQLYLFGILFNLLALLLSD-GSAISESG-FFHGYSWWVWIVIF 189 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcc--cchhHHHHHHHHHHHHHHHHHHHHhccc-ccccccCC-chhhcchHHHHHHH
Confidence 44445555666778888777787744 33454444433333322222222 2221 11222221 12222 2344567
Q ss_pred HHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhhee
Q 019306 192 LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLV 246 (343)
Q Consensus 192 lDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IV 246 (343)
+-+.+++++.+-..|.+.-.=..-....|..+.++|.++.+.+++..-++|+.+|
T Consensus 190 ~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 190 LQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 8999999999999999988888889999999999999999999999999998765
No 57
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=84.64 E-value=2 Score=41.02 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=56.9
Q ss_pred eehhhHH-HHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec
Q 019306 186 FVAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (343)
Q Consensus 186 f~imGll-Dal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s 256 (343)
.+.+|++ -+.+-.+.+.+.++.++....++.....++.+++++++|+.+.+..|++|..++++|+.+...+
T Consensus 217 l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 217 LMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 3445543 3455556667778888888888888888999999999999999999999999999998876544
No 58
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=83.78 E-value=1.6 Score=42.53 Aligned_cols=70 Identities=21% Similarity=0.198 Sum_probs=58.5
Q ss_pred CcceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeee----ehhheeeeeeeE
Q 019306 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL----FGCFLVGIGVII 252 (343)
Q Consensus 183 k~kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi----~G~~IVliGliv 252 (343)
.|+=++-|++-..+|+...++.+......---|.|..+..+.+...++||++=+..|+ +|++++++|.++
T Consensus 195 ~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 195 SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 4677888999999999999999998888889999999999999999999987555544 566666666543
No 59
>PF12398 DUF3660: Receptor serine/threonine kinase ; InterPro: IPR022126 This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with PF00954 from PFAM, PF01453 from PFAM, PF00069 from PFAM, PF08276 from PFAM. There is a conserved ELPL sequence motif. ; GO: 0004674 protein serine/threonine kinase activity
Probab=83.77 E-value=0.74 Score=33.03 Aligned_cols=30 Identities=27% Similarity=0.226 Sum_probs=23.8
Q ss_pred eeeeccccCCCCceEEEecCCccccccCCC
Q 019306 33 YLRDHHANQRLPTTLLFRSSKRNYYHNNSN 62 (343)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (343)
||..+++||-+|.-=++-||||++|+|+..
T Consensus 3 ~i~~~~RnQ~llmN~~v~sskr~~s~Enk~ 32 (42)
T PF12398_consen 3 PIVNRQRNQDLLMNGMVLSSKRQLSGENKT 32 (42)
T ss_pred ccccccccccccccceEEeccccccccCcc
Confidence 355567899998777788999999998754
No 60
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=79.79 E-value=5.2 Score=40.08 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=49.6
Q ss_pred HHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec
Q 019306 199 TGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (343)
Q Consensus 199 L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s 256 (343)
++-+...+++++..++=.-++.|+.+++..++-|.+.++..++|.+++++|+++--..
T Consensus 249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 4445566778887777777889999999999999999999999999999999988764
No 61
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=77.77 E-value=5.4 Score=38.07 Aligned_cols=137 Identities=17% Similarity=0.169 Sum_probs=100.2
Q ss_pred HHHHHHHhhhhhHHHHHHHhC--CCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchh-hhcCCCcceehhhHHHHHH
Q 019306 120 AAAVTVLLGVGNRVLYKLALV--PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDE-MLSMPKAPFVAVGLLEALA 196 (343)
Q Consensus 120 ~~i~~Vi~Gv~N~Vl~Kl~~~--~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~e-ml~~Pk~kf~imGllDal~ 196 (343)
+.+.--.+...-+|++|+..- .+++-..|.+.+..+-.+..+|+-+.. ++.+..+.+ --..||-...=++.+-..-
T Consensus 139 ~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL-~~T~VE~~qsFA~~PWG~l~G~A~L~lAF 217 (290)
T KOG4314|consen 139 CAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALIL-AFTGVEHLQSFAAAPWGCLCGAAGLSLAF 217 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHH-HHhchHHHHHHhhCCchhhhhHHHHHHHH
Confidence 333444445566778887765 367888888887777777777754422 233321111 1235666677788888889
Q ss_pred HHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecC
Q 019306 197 AATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (343)
Q Consensus 197 ~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sg 257 (343)
|++..+|-.-+.+-++.+=.-..||-....-.+|-+.-++...+.|..++++|.++...|-
T Consensus 218 N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 218 NFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred hhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 9999999999999888877778899999998888888888889999999999998888883
No 62
>PF15169 DUF4564: Domain of unknown function (DUF4564)
Probab=75.42 E-value=2.3 Score=39.48 Aligned_cols=56 Identities=21% Similarity=0.351 Sum_probs=43.1
Q ss_pred hccccceeee-ehhheeeeeeeEEeecCCCCCCCCCCcchHHHHHHHHHhHHHHHHHHH--HHHHhHH
Q 019306 231 LGRRYRVNQL-FGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVL--KEVIFLD 295 (343)
Q Consensus 231 Lk~RY~~~qi-~G~~IVliGliv~v~sgs~~g~s~~~~~vlw~lL~ilS~ip~A~SnV~--kE~~F~~ 295 (343)
|+++.....| +++.|+.+|+.....++ ..++|-++++++|++.|++|+= +|.+|.+
T Consensus 15 Lkrsp~~rsWsl~~gi~siGl~~~yys~---------d~~~wK~fyv~~c~fva~~n~edwee~iFdK 73 (187)
T PF15169_consen 15 LKRSPGIRSWSLLVGIASIGLAAAYYSS---------DSLLWKLFYVAGCLFVALQNMEDWEEAIFDK 73 (187)
T ss_pred EEcCCCccchhhHHHHHhcccceeeecC---------CchHHHHHHHHHHHHHHHhcchhhhheeEec
Confidence 5666666666 46668888888877773 4689999999999999999996 4566643
No 63
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=74.65 E-value=1.4 Score=37.28 Aligned_cols=70 Identities=11% Similarity=0.002 Sum_probs=57.4
Q ss_pred cceehhhHHHHHHHHHHHhhcccccccH-HHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEE
Q 019306 184 APFVAVGLLEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (343)
Q Consensus 184 ~kf~imGllDal~~~L~viA~~ytsgs~-~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~ 253 (343)
++.+++-.+=+.+-++.-.|.++.|... +.+-.+.-+..+.+.+.++.|.+.+..|++|..++++|++..
T Consensus 36 ~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 36 IYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 3344555666777778888888888776 578888889999999999999999999999999999998753
No 64
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=74.55 E-value=1.4 Score=37.31 Aligned_cols=64 Identities=22% Similarity=0.189 Sum_probs=47.6
Q ss_pred HHHHHHHHHhhcccccccH-HHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec
Q 019306 193 EALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (343)
Q Consensus 193 Dal~~~L~viA~~ytsgs~-~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s 256 (343)
-+.+-++...|..+.|... +.+..+.-+..+.++++++++.+.+..|++|..++++|++..-..
T Consensus 40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3333444444555555554 456667778888999999999999999999999999998876443
No 65
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=72.48 E-value=15 Score=37.90 Aligned_cols=82 Identities=13% Similarity=0.195 Sum_probs=68.0
Q ss_pred hhhhcCCCc-c---eehhhHH-HHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeee
Q 019306 176 DEMLSMPKA-P---FVAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGV 250 (343)
Q Consensus 176 ~eml~~Pk~-k---f~imGll-Dal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGl 250 (343)
.|..++|.. + .++.|++ -+++.++=..|...|++....+=....||..|+.=.++-++.|+..+++|+..+.+|.
T Consensus 306 ~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~F 385 (416)
T KOG2765|consen 306 EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGF 385 (416)
T ss_pred cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 345566653 2 2334544 5678889999999999999999999999999999999999999999999999999998
Q ss_pred eEEeecC
Q 019306 251 IITVASG 257 (343)
Q Consensus 251 iv~v~sg 257 (343)
+++-.++
T Consensus 386 v~vn~~~ 392 (416)
T KOG2765|consen 386 VIVNISS 392 (416)
T ss_pred hheeccc
Confidence 8877764
No 66
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=70.11 E-value=2.3 Score=35.85 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=41.6
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeeehhhhHHHHhhhhc
Q 019306 272 SLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQDVMVHRCS 325 (343)
Q Consensus 272 ~lL~ilS~ip~A~SnV~kE~~F~~~~~~LK~~ldif~vns~~s~fQ~ifv~~~s 325 (343)
-++.++|.+++|+.+|+.|+.+++.. +-+.+.|.+.+..+.+...+++.++++
T Consensus 2 ~~~~l~s~~~~al~~v~~~~~~~~~~-~~~~~~~~~~l~~~~~~~s~~~l~~~~ 54 (153)
T PF03151_consen 2 FILALASSLFSALRNVLIKKLLKKVS-SNSKKLNPLNLLYYNSPISFIILLPLA 54 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc-ccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999988732 011248888888888888888887753
No 67
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=65.74 E-value=7 Score=31.59 Aligned_cols=60 Identities=15% Similarity=0.060 Sum_probs=33.8
Q ss_pred eehhhHHHHHHHHHHHhhcccccccHH-HHhccchHHHHHHHHHHHhccccceeeeehhhe
Q 019306 186 FVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFL 245 (343)
Q Consensus 186 f~imGllDal~~~L~viA~~ytsgs~~-~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~I 245 (343)
.+..-.+=..+-++...|..+.|.+.. .+..+.-+..+.+.+.++.|.+.+..|++|..+
T Consensus 32 ~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 32 TILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp --HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 333334556666777778888887764 788888999999999999999999999999865
No 68
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=63.80 E-value=8.7 Score=32.78 Aligned_cols=49 Identities=20% Similarity=0.238 Sum_probs=42.8
Q ss_pred cccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec
Q 019306 208 SGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (343)
Q Consensus 208 sgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s 256 (343)
.|-...-=.+..|..++++-+.+=|+|+..+.++|+.+|++|+.+....
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 4446667788899999999999999999999999999999998887654
No 69
>PRK11431 multidrug efflux system protein; Provisional
Probab=63.54 E-value=2.7 Score=35.34 Aligned_cols=65 Identities=17% Similarity=0.064 Sum_probs=50.5
Q ss_pred hhHHHHHHHHHHHhhcccccccH-HHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEE
Q 019306 189 VGLLEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (343)
Q Consensus 189 mGllDal~~~L~viA~~ytsgs~-~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~ 253 (343)
.-.+=+.+-++.-.|.+..|... +.+-.+.-+..+.+.+.++.|.+.+..|++|..++++|++..
T Consensus 35 ~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 35 TVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 33444555556666666666554 567777788889999999999999999999999999998765
No 70
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=62.37 E-value=25 Score=32.38 Aligned_cols=56 Identities=11% Similarity=0.192 Sum_probs=31.9
Q ss_pred CCcceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHH---HHHHhccccce
Q 019306 182 PKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILL---SIIFLGRRYRV 237 (343)
Q Consensus 182 Pk~kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmll---S~ifLk~RY~~ 237 (343)
+.|++++++.+=+..=+..+.....+|+...+-|..+......+. -..++||||+.
T Consensus 145 ~~~k~~~~~~~~~~~w~~~~~~~~~lp~~inp~l~~~~~iiig~i~~~~~~~lkkk~~i 203 (206)
T PF06570_consen 145 SWWKYILISVLAMVLWIVIFVLTSFLPPVINPVLPPWVYIIIGVIAFALRFYLKKKYNI 203 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCCcCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 346666665554554444444555567666666665554433333 34578888874
No 71
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=59.11 E-value=32 Score=34.54 Aligned_cols=68 Identities=16% Similarity=0.170 Sum_probs=51.4
Q ss_pred ceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeE
Q 019306 185 PFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (343)
Q Consensus 185 kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv 252 (343)
-.++.+.|-+.|+.+.+.-...-..-.......+-=-+++++|.+.-+.+.+..|++|+++|..|+..
T Consensus 243 Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 243 DILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 35677899999999888776644333334444444457889999999999999999999999887654
No 72
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=58.31 E-value=4.9 Score=34.19 Aligned_cols=71 Identities=18% Similarity=0.098 Sum_probs=57.0
Q ss_pred CcceehhhHHHHHHHHHHHhhcccccccH-HHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEE
Q 019306 183 KAPFVAVGLLEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (343)
Q Consensus 183 k~kf~imGllDal~~~L~viA~~ytsgs~-~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~ 253 (343)
.++.+++-.+=..+=.+.-.|..+.|... +.+-.+.=+.-+.+.++++++.+.+..+++|..++++|++..
T Consensus 30 ~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 30 LWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 34555555556666666677777777665 578888889999999999999999999999999999998654
No 73
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=53.97 E-value=44 Score=29.11 Aligned_cols=70 Identities=24% Similarity=0.366 Sum_probs=48.2
Q ss_pred hhcCCCcceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHH--------hccccceeeeehhheeeee
Q 019306 178 MLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIF--------LGRRYRVNQLFGCFLVGIG 249 (343)
Q Consensus 178 ml~~Pk~kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~if--------Lk~RY~~~qi~G~~IVliG 249 (343)
..+.|+|.|+ -|++-+.--.......+.........+ .+-=+++.|.++ -|++.+..+++|+.++++|
T Consensus 60 ~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l---~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~G 135 (138)
T PF04657_consen 60 LSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTIL---IVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAG 135 (138)
T ss_pred hccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHH---HHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHH
Confidence 4566777666 788888888888888777766654432 223334444443 5678999999999999888
Q ss_pred ee
Q 019306 250 VI 251 (343)
Q Consensus 250 li 251 (343)
++
T Consensus 136 v~ 137 (138)
T PF04657_consen 136 VI 137 (138)
T ss_pred Hh
Confidence 75
No 74
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=51.74 E-value=4.1 Score=39.78 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=63.5
Q ss_pred CcceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecC
Q 019306 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (343)
Q Consensus 183 k~kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sg 257 (343)
+|...++|.+.++|+.+.+.--.+-.+.--.+...+-=-||++.|.++...-.+..||+|..+|..|+.+.+.-|
T Consensus 241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 366788999999999999988887776655666666667999999999999999999999999999998876654
No 75
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=50.64 E-value=9.5 Score=32.56 Aligned_cols=49 Identities=12% Similarity=0.131 Sum_probs=42.3
Q ss_pred cccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeec
Q 019306 208 SGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (343)
Q Consensus 208 sgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~s 256 (343)
.|-.+.--.+..|..++++-+..=|+|..++.+.|+.+|++|+.+.+..
T Consensus 57 ~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 57 FGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred hhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 3445666778889999999999999999999999999999998887764
No 76
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=49.98 E-value=7.7 Score=38.70 Aligned_cols=69 Identities=16% Similarity=0.203 Sum_probs=50.0
Q ss_pred cceehhhHHHHHH---HHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeE
Q 019306 184 APFVAVGLLEALA---AATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (343)
Q Consensus 184 ~kf~imGllDal~---~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv 252 (343)
+.+..+.+.++++ |...+....+||+...+++++.==.+.++.|+++++++.+..|.+|.++.++|+..
T Consensus 233 ~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~ 304 (316)
T KOG1441|consen 233 VTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFL 304 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHH
Confidence 3455555555444 55566666689999999998887777777787788887778888888777777653
No 77
>PRK13499 rhamnose-proton symporter; Provisional
Probab=45.53 E-value=15 Score=37.10 Aligned_cols=98 Identities=19% Similarity=0.060 Sum_probs=73.3
Q ss_pred hhHHHHHHHHHHHhhcccccccHH-HHhccchHHHHHHHHHHHhcc-------ccceeeeehhheeeeeeeEEeecCCCC
Q 019306 189 VGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGR-------RYRVNQLFGCFLVGIGVIITVASGSNP 260 (343)
Q Consensus 189 mGllDal~~~L~viA~~ytsgs~~-~LL~Q~~IP~tmllS~ifLk~-------RY~~~qi~G~~IVliGliv~v~sgs~~ 260 (343)
-|++=..+|++.+.+..|...+.. ++=.+..++...++-.+++++ +=...=++|++++++|++++...+...
T Consensus 79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k 158 (345)
T PRK13499 79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLK 158 (345)
T ss_pred HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 478999999999999999988885 455566677787887777663 111234678999999999988854322
Q ss_pred CC------CCCCcchHHHHHHHHHhHHHHHHH
Q 019306 261 GH------SLKGAGIFWSLLMIVSFLLQAADT 286 (343)
Q Consensus 261 g~------s~~~~~vlw~lL~ilS~ip~A~Sn 286 (343)
++ ..+.+.-.+.++.++|.+.++.-+
T Consensus 159 ~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 159 ERKMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred ccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 21 234567889999999999999988
No 78
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=44.26 E-value=59 Score=33.05 Aligned_cols=140 Identities=11% Similarity=0.102 Sum_probs=88.3
Q ss_pred CcchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcc--eehh
Q 019306 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAP--FVAV 189 (343)
Q Consensus 112 ~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~k--f~im 189 (343)
+.-+-+...+...++.|-++.-+.|+. +-.|-+-.+-.++-+.|=..+-...........+. +.--|-+|- -+++
T Consensus 180 n~~~G~~avl~~c~~SgfAgvYfEkiL--K~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~-~~gff~G~s~~vw~v 256 (345)
T KOG2234|consen 180 NPFLGLVAVLVACFLSGFAGVYFEKIL--KGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAIN-EYGFFYGYSSIVWLV 256 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHH--hcCCchHHHHHHHHHHHHHHHHHHHHhhccccccc-cCCccccccHHHHHH
Confidence 344555666777788888888888887 33344433222221222122211112222222222 111222332 3345
Q ss_pred hHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEe
Q 019306 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (343)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v 254 (343)
=+..+.+++++-+=..|.+.-+=..-....|.++.+.|+.+.+.+.+..=.+|+.+|+..+.+-.
T Consensus 257 Vl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~ 321 (345)
T KOG2234|consen 257 VLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYS 321 (345)
T ss_pred HHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhh
Confidence 57788999998888888887777777778999999999999999999999999999988877655
No 79
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=43.52 E-value=42 Score=33.60 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=80.0
Q ss_pred hhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCC---cceehhhHHHHHHHHHHHhhc
Q 019306 128 GVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPK---APFVAVGLLEALAAATGMAAG 204 (343)
Q Consensus 128 Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk---~kf~imGllDal~~~L~viA~ 204 (343)
-..|.|..|....|..+--|-++..+|...++.|.+.+...... .+...+|+ ++|.++=.+..+-++.+.++-
T Consensus 197 vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~----~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvT 272 (347)
T KOG1442|consen 197 VALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEF----QAVVGFPHLPAIKFWILMTLSGLFGFAMGYVT 272 (347)
T ss_pred HHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchH----HHHcCcccchHHHHHHHHHHHHHHHHHhhhee
Confidence 35799999999889999999999999988888887776654322 22344443 577776555555555444432
Q ss_pred c----cccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeee
Q 019306 205 A----ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIG 249 (343)
Q Consensus 205 ~----ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliG 249 (343)
. .||+.--++=..+---.+-++...+++.--+...|.|.++|++|
T Consensus 273 g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvg 321 (347)
T KOG1442|consen 273 GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVG 321 (347)
T ss_pred eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEeh
Confidence 2 45554444444455566778888888887778888888777755
No 80
>PF04973 NMN_transporter: Nicotinamide mononucleotide transporter; InterPro: IPR006419 The PnuC protein of Escherichia coli is membrane protein responsible for nicotinamide mononucleotide transport, subject to regulation by interaction with the NadR (also called NadI) protein (see IPR006417 from INTERPRO). The extreme N- and C-terminal regions are poorly conserved. ; GO: 0006810 transport, 0016020 membrane
Probab=43.14 E-value=83 Score=28.21 Aligned_cols=106 Identities=15% Similarity=0.128 Sum_probs=45.4
Q ss_pred hhhhhHHHHHHHhCCCCChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehhhHHHHHHHHHHHhhccc
Q 019306 127 LGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAI 206 (343)
Q Consensus 127 ~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~imGllDal~~~L~viA~~y 206 (343)
+|..+.+++=...-..+.|.-...|+..+. .-+|+-+...|.+.+.-..+.++.+++.....-..=+.+......-...
T Consensus 28 ~giis~~~y~~i~~~~~ly~~~~lq~~~~~-~~i~G~~~W~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 106 (181)
T PF04973_consen 28 FGIISSLLYAYIFYQAGLYGDMLLQLFYFI-MSIYGWYQWKKGRDENDEVKVRRLSKKQWILLLIGILIGTAIFGFILKF 106 (181)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHHHHHHHHhhhccCcccceeeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555555555555556665555543333 3333333333222111111122333322222221222222222222223
Q ss_pred ccccHHHHhccchHHHHHHHHHHHhcc
Q 019306 207 LSGASIPILSQTFLVWQILLSIIFLGR 233 (343)
Q Consensus 207 tsgs~~~LL~Q~~IP~tmllS~ifLk~ 233 (343)
...+-.+.++-.+...+++-.++.-||
T Consensus 107 ~~~~~~~~~Da~~~~~siva~~l~~~k 133 (181)
T PF04973_consen 107 LTDSPFPWLDALTTVLSIVAQWLMARK 133 (181)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 334445777777777776666665544
No 81
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=39.16 E-value=24 Score=35.22 Aligned_cols=66 Identities=17% Similarity=0.271 Sum_probs=56.8
Q ss_pred CcceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeee
Q 019306 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGI 248 (343)
Q Consensus 183 k~kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVli 248 (343)
+|-|..+|..-..++++...|.+.--.-=..++..+-+++..++=.+|.+.-.+.|.|+|+++++.
T Consensus 253 r~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvs 318 (346)
T KOG4510|consen 253 RWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVS 318 (346)
T ss_pred eEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeeh
Confidence 466888999999999999999986554445678888999999999999999999999999977763
No 82
>PRK02237 hypothetical protein; Provisional
Probab=38.96 E-value=8.5 Score=32.95 Aligned_cols=48 Identities=13% Similarity=0.155 Sum_probs=41.7
Q ss_pred cccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEee
Q 019306 208 SGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (343)
Q Consensus 208 sgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~ 255 (343)
.|=...-=.+..|..++++-+.+=|.|+..+.++|+.+|++|+.+...
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 355666778889999999999999999999999999999999876644
No 83
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=38.68 E-value=88 Score=30.63 Aligned_cols=157 Identities=13% Similarity=0.185 Sum_probs=90.9
Q ss_pred HHHHHHhhhhhHHHHHHHhCCC-CChhHHHHHHhhhhhhHhHHHHHHHHHhcCccchhhhcCCCcceehhhHHHHHHHHH
Q 019306 121 AAVTVLLGVGNRVLYKLALVPL-KHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAAT 199 (343)
Q Consensus 121 ~i~~Vi~Gv~N~Vl~Kl~~~~~-~nYp~Fl~q~~t~~yv~vyf~il~~r~~~~~it~eml~~Pk~kf~imGllDal~~~L 199 (343)
++.+......-++.-|....-. .|-.|.+-..++.++++--...-..|. +.-...++ ++...++++-+.--+.
T Consensus 11 ~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~----~~fR~t~a--K~WfpiSfLLv~MIyt 84 (309)
T COG5070 11 SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRL----VEFRLTKA--KKWFPISFLLVVMIYT 84 (309)
T ss_pred HHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhH----hheehhhh--hhhcCHHHHHHHHHHh
Confidence 4444445555556666666543 355555555555554432211111111 10001112 2345577887777788
Q ss_pred HHhhcccccccHHHHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEEeecCCCCC---CCCCCcchHHHHHHH
Q 019306 200 GMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPG---HSLKGAGIFWSLLMI 276 (343)
Q Consensus 200 ~viA~~ytsgs~~~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~sgs~~g---~s~~~~~vlw~lL~i 276 (343)
.-.+++|++.+++.+....+|...+..=..|.|.|.+-.+...-.+.++.-.+.-.+|-.+. +..-..+.+|+..-.
T Consensus 85 ~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~Nc 164 (309)
T COG5070 85 SSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNC 164 (309)
T ss_pred cccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhh
Confidence 88999999999999999999999999999999999888777766554433322222211000 001244567776665
Q ss_pred HHhHHHH
Q 019306 277 VSFLLQA 283 (343)
Q Consensus 277 lS~ip~A 283 (343)
++...+-
T Consensus 165 lssaafV 171 (309)
T COG5070 165 LSSAAFV 171 (309)
T ss_pred HhHHHHH
Confidence 5554443
No 84
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=37.90 E-value=40 Score=33.03 Aligned_cols=104 Identities=18% Similarity=0.144 Sum_probs=74.8
Q ss_pred ehhhHHHHHHHHHHHhhcccccccHHHHh-ccchHHHHHHHHHHHhccccceeeee----hhheeeeeeeEEeecCCCCC
Q 019306 187 VAVGLLEALAAATGMAAGAILSGASIPIL-SQTFLVWQILLSIIFLGRRYRVNQLF----GCFLVGIGVIITVASGSNPG 261 (343)
Q Consensus 187 ~imGllDal~~~L~viA~~ytsgs~~~LL-~Q~~IP~tmllS~ifLk~RY~~~qi~----G~~IVliGliv~v~sgs~~g 261 (343)
++-|++=++++..++.+..+...+...-+ .+.-++.+.++..++++.--+..+++ +.+++++|+.+....+.+++
T Consensus 49 ~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~ 128 (269)
T PF06800_consen 49 FLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSD 128 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccccc
Confidence 44588999999999999998888876444 46678899999999999966666654 66788888888777654443
Q ss_pred CC-CCCcchHHHHHHHHHhHHHHHHHHHHH
Q 019306 262 HS-LKGAGIFWSLLMIVSFLLQAADTVLKE 290 (343)
Q Consensus 262 ~s-~~~~~vlw~lL~ilS~ip~A~SnV~kE 290 (343)
++ .+.+...+.+..++|++.+-+=.+.-.
T Consensus 129 ~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~ 158 (269)
T PF06800_consen 129 KSSSKSNMKKGILALLISTIGYWIYSVIPK 158 (269)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 22 234556677777777776655554433
No 85
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=34.85 E-value=23 Score=30.56 Aligned_cols=72 Identities=13% Similarity=0.067 Sum_probs=51.5
Q ss_pred CCcceehhhHHHHHHHHHHHhhcccccccHH-HHhccchHHHHHHHHHHHhccccceeeeehhheeeeeeeEE
Q 019306 182 PKAPFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (343)
Q Consensus 182 Pk~kf~imGllDal~~~L~viA~~ytsgs~~-~LL~Q~~IP~tmllS~ifLk~RY~~~qi~G~~IVliGliv~ 253 (343)
-.|.|.++=+++-++..+-+.-++++|.++. ++-|-..+.+|.+.-+..=.+---..-++|..+++.|+.+.
T Consensus 51 l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 51 LNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 3588999999999999999999999999885 45566677777776654333333445566666666665543
No 86
>PRK13499 rhamnose-proton symporter; Provisional
Probab=30.34 E-value=1.3e+02 Score=30.38 Aligned_cols=47 Identities=13% Similarity=0.067 Sum_probs=37.2
Q ss_pred ehhhHHHHHHHHHHHhhcccccc----cHHHHhccchHHHHHHHHHHHhccc
Q 019306 187 VAVGLLEALAAATGMAAGAILSG----ASIPILSQTFLVWQILLSIIFLGRR 234 (343)
Q Consensus 187 ~imGllDal~~~L~viA~~ytsg----s~~~LL~Q~~IP~tmllS~ifLk~R 234 (343)
++.|++-..++.+..+|....+. .++.+.+|..+.+..++..+ ||++
T Consensus 264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE~ 314 (345)
T PRK13499 264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKEW 314 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhhc
Confidence 56688899999998888875533 36778889999999999984 7764
No 87
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=23.59 E-value=3.3e+02 Score=28.17 Aligned_cols=49 Identities=24% Similarity=0.295 Sum_probs=27.5
Q ss_pred HHHhccccceee---eehhheeeeeeeEEeec----CCCC----CCCCCCcchHHHHHHH
Q 019306 228 IIFLGRRYRVNQ---LFGCFLVGIGVIITVAS----GSNP----GHSLKGAGIFWSLLMI 276 (343)
Q Consensus 228 ~ifLk~RY~~~q---i~G~~IVliGliv~v~s----gs~~----g~s~~~~~vlw~lL~i 276 (343)
+.+|.+||..+- +.+++...+|+++.... .-.+ +........+|++|++
T Consensus 234 w~Llqprdyl~~~~L~~~~~~~~igli~~~~~i~~p~~~~~~~~~~~p~~~~pl~P~LFI 293 (376)
T PF02554_consen 234 WKLLQPRDYLNGFLLIGMLIGLVIGLIIGGPTIQMPAFTSFAVNGNGPAGGGPLFPFLFI 293 (376)
T ss_pred HHHhCchHHHHHHHHHHHHHHHHHheeecCCCcCcchhhhhhhhccCCCcCCCCHHHHHH
Confidence 457899987654 45555666666664321 1111 1112356788987764
No 88
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=22.11 E-value=5.6e+02 Score=24.45 Aligned_cols=62 Identities=19% Similarity=0.170 Sum_probs=44.4
Q ss_pred hhcCCCcceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHH---HHHHHHHHhccccceee
Q 019306 178 MLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVW---QILLSIIFLGRRYRVNQ 239 (343)
Q Consensus 178 ml~~Pk~kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~---tmllS~ifLk~RY~~~q 239 (343)
-+.-+.||+++...+-++-=++++++...+|.++..-|.-....+ ..+--.+.||||++...
T Consensus 156 sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~~L~pi~l~IiGav~lalRfylkkk~NIqs 220 (226)
T COG4858 156 SQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNPQLPPIALTIIGAVILALRFYLKKKKNIQS 220 (226)
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCcCCchHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 344557899999988888889999999999999887666543322 23333456888887543
No 89
>COG0805 TatC Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion]
Probab=20.29 E-value=7.8e+02 Score=23.96 Aligned_cols=95 Identities=22% Similarity=0.223 Sum_probs=55.3
Q ss_pred ccccCcchHHHHHHHHHHHhhhhhHHHHHHHhCC----------------CCChhHHHHHHhh-hhhhHhHH--HHH-HH
Q 019306 108 SKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVP----------------LKHYPFFLAQLAT-FGYVAVYF--SIL-YL 167 (343)
Q Consensus 108 ~~~~~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~----------------~~nYp~Fl~q~~t-~~yv~vyf--~il-~~ 167 (343)
--.+.|.....+.....+++-.+....|+...-- +..-.-+++.+.+ .+...+.| +++ ..
T Consensus 102 Ly~~Err~~~~~~~~s~~LF~~G~~faYfvv~P~~~~F~~~~~~~~~~~~~~~i~~y~~f~l~l~~~FGv~FElPvv~~~ 181 (255)
T COG0805 102 LYKHERRLILPLLIPSFVLFLLGAAFAYFVVFPLVFKFLLSFAAPDGVSPALSISKYLSFVLTLLLAFGVAFELPVVIVL 181 (255)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceeeeecHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566667777777777777777777776521 1111122222222 11222222 443 34
Q ss_pred HHhcCccchhhhcCCCcceehhhHHHHHHHHHHHhhcccccccH
Q 019306 168 RYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGAS 211 (343)
Q Consensus 168 r~~~~~it~eml~~Pk~kf~imGllDal~~~L~viA~~ytsgs~ 211 (343)
..+.|.++.|.++ .+|||+++++ .++|...||+..
T Consensus 182 L~~~Giv~~~~L~-~~rr~~iv~~--------fViaaviTPpd~ 216 (255)
T COG0805 182 LTRLGIVTPETLK-KKRRYAIVAA--------FVIAAIITPPDV 216 (255)
T ss_pred HHHcCCccHHHHH-HcCCeeeehH--------HHHHHHcCCCch
Confidence 5778889988876 6899999884 356667777544
No 90
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=20.23 E-value=65 Score=32.08 Aligned_cols=77 Identities=21% Similarity=0.084 Sum_probs=53.8
Q ss_pred hcCCCc-ceehhhHHHHHHHHHHHhhcccccccHHHHhccchHHH-HHHHHHHHhccccceeeeehhheeeeeeeEEee
Q 019306 179 LSMPKA-PFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVW-QILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (343)
Q Consensus 179 l~~Pk~-kf~imGllDal~~~L~viA~~ytsgs~~~LL~Q~~IP~-tmllS~ifLk~RY~~~qi~G~~IVliGliv~v~ 255 (343)
++.|+. -.++++.++...|-..++=+....-.+-.=|+=.+-|. .+++-.+|||.|.++.|++.+.+..+||.+...
T Consensus 66 ~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 66 LKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 444432 34556777888887777655544344444455555565 456688999999999999999999999887654
Done!