Your job contains 1 sequence.
>019309
MANDGENQTTTKPPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVA
DNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKT
NVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVA
ETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRS
FCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDP
RQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKRN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019309
(343 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 1594 9.0e-164 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 1584 1.0e-162 1
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 1583 1.3e-162 1
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 1216 1.0e-123 1
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 1085 7.8e-110 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 1073 1.5e-108 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 1072 1.9e-108 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 1072 1.9e-108 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 1072 1.9e-108 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 1072 1.9e-108 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 1072 1.9e-108 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 1071 2.4e-108 1
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 1066 8.1e-108 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 1047 8.3e-106 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 1032 3.2e-104 1
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 1032 3.2e-104 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 1031 4.1e-104 1
UNIPROTKB|C9JW33 - symbol:UXS1 "UDP-glucuronic acid decar... 624 5.5e-61 1
UNIPROTKB|C9JCB7 - symbol:UXS1 "UDP-glucuronic acid decar... 543 2.1e-52 1
UNIPROTKB|C9JFU6 - symbol:UXS1 "UDP-glucuronic acid decar... 510 6.7e-49 1
UNIPROTKB|B4E3U7 - symbol:UXS1 "cDNA FLJ57788, highly sim... 507 1.4e-48 1
UNIPROTKB|C9JE50 - symbol:UXS1 "UDP-glucuronic acid decar... 507 1.4e-48 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 391 2.7e-36 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 344 2.6e-31 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 343 3.3e-31 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 320 9.1e-29 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 314 3.9e-28 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 308 1.7e-27 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 307 2.2e-27 1
UNIPROTKB|P77398 - symbol:arnA "fused UDP-L-Ara4N formylt... 262 1.6e-26 2
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 296 3.2e-26 1
UNIPROTKB|Q4KC82 - symbol:arnA "Bifunctional polymyxin re... 252 1.2e-25 2
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 296 2.5e-25 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 295 3.2e-25 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 279 2.0e-24 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 278 2.6e-24 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 277 3.3e-24 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 275 5.3e-24 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 283 6.5e-24 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 273 8.7e-24 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 271 1.4e-23 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 268 2.9e-23 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 267 3.8e-23 1
TAIR|locus:2150441 - symbol:GME ""GDP-D-mannose 3',5'-epi... 266 4.8e-23 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 263 1.0e-22 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 263 1.0e-22 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 263 1.0e-22 1
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 262 1.3e-22 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 258 3.4e-22 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 257 4.3e-22 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 253 1.1e-21 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 247 1.5e-20 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 242 1.7e-20 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 240 2.7e-20 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 238 6.7e-20 1
TAIR|locus:2200018 - symbol:AXS2 "UDP-D-apiose/UDP-D-xylo... 155 8.4e-20 2
UNIPROTKB|C9J3T9 - symbol:UXS1 "UDP-glucuronic acid decar... 233 1.5e-19 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 218 4.0e-19 2
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 234 8.2e-19 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 227 6.3e-18 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 203 2.6e-17 2
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 203 2.6e-17 2
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 209 3.8e-17 2
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 221 4.2e-17 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 221 4.2e-17 1
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 153 4.2e-17 2
TAIR|locus:2827733 - symbol:AT2G28755 "AT2G28755" species... 210 4.9e-17 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 223 5.5e-17 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 146 9.1e-17 2
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 148 2.2e-16 2
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 163 3.8e-16 2
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 220 9.3e-16 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 214 1.1e-15 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 213 1.2e-15 1
UNIPROTKB|Q83AP4 - symbol:CBU_1837 "UDP-glucose 4-epimera... 213 1.2e-15 1
TIGR_CMR|CBU_1837 - symbol:CBU_1837 "NAD-dependent epimer... 213 1.2e-15 1
UNIPROTKB|O53634 - symbol:gca "POSSIBLE GDP-MANNOSE 4,6-D... 209 2.2e-15 1
TIGR_CMR|SO_3188 - symbol:SO_3188 "dTDP-glucose 4,6-dehyd... 141 2.2e-15 2
TIGR_CMR|CBU_0676 - symbol:CBU_0676 "NAD dependent epimer... 210 2.6e-15 1
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 147 6.0e-15 2
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 205 1.1e-14 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 208 1.3e-14 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 203 2.3e-14 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 203 2.3e-14 1
UNIPROTKB|Q6T1X6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 200 2.8e-14 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 201 4.7e-14 1
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 154 4.9e-14 3
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 200 5.2e-14 1
TIGR_CMR|CPS_2147 - symbol:CPS_2147 "UDP-glucose 4-epimer... 147 6.8e-14 2
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 199 6.8e-14 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 190 9.4e-14 2
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 200 1.2e-13 1
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 199 1.7e-13 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 194 3.5e-13 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 191 5.6e-13 1
TIGR_CMR|GSU_0627 - symbol:GSU_0627 "GDP-fucose synthetas... 190 6.1e-13 1
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 191 1.4e-12 1
UNIPROTKB|Q9HTB6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 186 1.6e-12 1
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 158 1.8e-12 2
UNIPROTKB|E9PKL9 - symbol:TSTA3 "GDP-L-fucose synthase" s... 181 2.5e-12 1
WARNING: Descriptions of 116 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 1594 (566.2 bits), Expect = 9.0e-164, P = 9.0e-164
Identities = 299/315 (94%), Positives = 311/315 (98%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
QSNMRIL++GGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD
Sbjct: 26 QSNMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 85
Query: 87 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 146
VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE
Sbjct: 86 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 145
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP 206
VYGDPLIHPQPE+YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI+IRIARIFNTYGP
Sbjct: 146 VYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 205
Query: 207 RMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIG 266
RMNIDDGRVVSNFIAQALRGE LTVQKPGTQTRSFCYVSDMVDGL+RLMEG++TGP+NIG
Sbjct: 206 RMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLMEGDDTGPINIG 265
Query: 267 NPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 326
NPGEFTM+ELAETVKELINP IEIKMVENTPDDPRQRKPDI+KAKE+LGWEPKVKLR+GL
Sbjct: 266 NPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDITKAKEVLGWEPKVKLREGL 325
Query: 327 PLMEEDFRSRLGVPK 341
PLMEEDFR RLGV K
Sbjct: 326 PLMEEDFRLRLGVHK 340
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 1584 (562.7 bits), Expect = 1.0e-162, P = 1.0e-162
Identities = 296/315 (93%), Positives = 309/315 (98%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
Q NMRIL++GGAGFIGSHLVDKLMENEKNEV+VADNYFTGSK+NLKKWIGHPRFELIRHD
Sbjct: 42 QPNMRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRHD 101
Query: 87 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 146
VTEPLLIEVD+IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE
Sbjct: 102 VTEPLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 161
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP 206
VYGDPLIHPQPE+YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI+IRIARIFNTYGP
Sbjct: 162 VYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 221
Query: 207 RMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIG 266
RMNIDDGRVVSNFIAQALRGE LTVQKPGTQTRSFCYVSDMVDGLIRLMEG +TGP+NIG
Sbjct: 222 RMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLIRLMEGNDTGPINIG 281
Query: 267 NPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 326
NPGEFTM+ELAETVKELINP IEIKMVENTPDDPRQRKPDISKAKE+LGWEPKVKLR+GL
Sbjct: 282 NPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGL 341
Query: 327 PLMEEDFRSRLGVPK 341
PLMEEDFR RL VP+
Sbjct: 342 PLMEEDFRLRLNVPR 356
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 1583 (562.3 bits), Expect = 1.3e-162, P = 1.3e-162
Identities = 295/316 (93%), Positives = 309/316 (97%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
QSNMRILVTGGAGFIGSHLVDKLM+NEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD
Sbjct: 28 QSNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 87
Query: 87 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 146
VTEPL +EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE
Sbjct: 88 VTEPLFVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 147
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP 206
VYGDPL+HPQ E+YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI+IRIARIFNTYGP
Sbjct: 148 VYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 207
Query: 207 RMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIG 266
RMNIDDGRVVSNFIAQALRGE LTVQKPGTQTRSFCYVSDMV+GL+RLMEG+ TGP+NIG
Sbjct: 208 RMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEGDQTGPINIG 267
Query: 267 NPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 326
NPGEFTM+ELAETVKELI P +EIKMVENTPDDPRQRKPDISKAKE+LGWEPKVKLR+GL
Sbjct: 268 NPGEFTMVELAETVKELIKPDVEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGL 327
Query: 327 PLMEEDFRSRLGVPKR 342
PLMEEDFR RLGVPK+
Sbjct: 328 PLMEEDFRLRLGVPKK 343
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 1216 (433.1 bits), Expect = 1.0e-123, P = 1.0e-123
Identities = 227/311 (72%), Positives = 262/311 (84%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
+ +R++VTGGAGF+GSHLVD+LM + VIV DN+FTG K+N+ +P FE+IRHD
Sbjct: 116 RKGLRVVVTGGAGFVGSHLVDRLMARG-DTVIVVDNFFTGRKENVMHHFSNPNFEMIRHD 174
Query: 87 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 146
V EP+L+EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct: 175 VVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 234
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP 206
VYGDPL HPQ ETYWGNVNPIGVRSCYDEGKR AETL DYHR +++RIARIFNTYGP
Sbjct: 235 VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGP 294
Query: 207 RMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIG 266
RM IDDGRVVSNF+AQALR EPLTV G QTRSF +VSD+V+GL+RLMEGE+ GP N+G
Sbjct: 295 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLG 354
Query: 267 NPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 326
NPGEFTMLELA+ V+E I+P I+ NT DDP +RKPDI+KAKELLGWEPKV LR GL
Sbjct: 355 NPGEFTMLELAKVVQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGL 414
Query: 327 PLMEEDFRSRL 337
PLM +DFR R+
Sbjct: 415 PLMVKDFRQRV 425
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 1085 (387.0 bits), Expect = 7.8e-110, P = 7.8e-110
Identities = 204/313 (65%), Positives = 245/313 (78%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EP
Sbjct: 91 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 149
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 150
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 150 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 209
Query: 151 PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNI 210
P +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM++
Sbjct: 210 PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 269
Query: 211 DDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGE 270
+DGRVVSNFI QAL+GEPLTV PGTQTR+F YVSD+V+GL+ LM + PVN+GNP E
Sbjct: 270 NDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 329
Query: 271 FTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLME 330
T+LE A+ +K+L+ G EI+ + DDP++RKPDI KAK LLGWEP V L +GL
Sbjct: 330 HTILEFAQLIKKLVGSGSEIQFLSEAQDDPQKRKPDIRKAKLLLGWEPVVPLEEGLNKAI 389
Query: 331 EDFRSRLGVPKRN 343
FR L N
Sbjct: 390 HYFRKELEYQANN 402
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 202/313 (64%), Positives = 243/313 (77%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RILVTGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EP
Sbjct: 90 RILVTGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 150
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 151 PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNI 210
P +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 211 DDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGE 270
+DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 271 FTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLME 330
T+LE A+ +K L+ G EI+ + DDP++RKPDI KAK +LGWEP V L +GL
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388
Query: 331 EDFRSRLGVPKRN 343
FR L N
Sbjct: 389 HYFRKELEYQANN 401
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 201/313 (64%), Positives = 243/313 (77%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EP
Sbjct: 33 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 91
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 150
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 92 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 151
Query: 151 PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNI 210
P +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM++
Sbjct: 152 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 211
Query: 211 DDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGE 270
+DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E
Sbjct: 212 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 271
Query: 271 FTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLME 330
T+LE A+ +K L+ G EI+ + DDP++RKPDI KAK +LGWEP V L +GL
Sbjct: 272 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 331
Query: 331 EDFRSRLGVPKRN 343
FR L N
Sbjct: 332 HYFRKELEYQANN 344
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 201/313 (64%), Positives = 243/313 (77%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 150
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 151 PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNI 210
P +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 211 DDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGE 270
+DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 271 FTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLME 330
T+LE A+ +K L+ G EI+ + DDP++RKPDI KAK +LGWEP V L +GL
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388
Query: 331 EDFRSRLGVPKRN 343
FR L N
Sbjct: 389 HYFRKELEYQANN 401
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 201/313 (64%), Positives = 243/313 (77%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 150
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 151 PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNI 210
P +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 211 DDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGE 270
+DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 271 FTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLME 330
T+LE A+ +K L+ G EI+ + DDP++RKPDI KAK +LGWEP V L +GL
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388
Query: 331 EDFRSRLGVPKRN 343
FR L N
Sbjct: 389 HYFRKELEYQANN 401
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 201/313 (64%), Positives = 243/313 (77%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 150
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 151 PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNI 210
P +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 211 DDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGE 270
+DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 271 FTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLME 330
T+LE A+ +K L+ G EI+ + DDP++RKPDI KAK +LGWEP V L +GL
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388
Query: 331 EDFRSRLGVPKRN 343
FR L N
Sbjct: 389 HYFRKELEYQANN 401
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 201/313 (64%), Positives = 243/313 (77%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 150
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 151 PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNI 210
P +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 211 DDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGE 270
+DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 271 FTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLME 330
T+LE A+ +K L+ G EI+ + DDP++RKPDI KAK +LGWEP V L +GL
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388
Query: 331 EDFRSRLGVPKRN 343
FR L N
Sbjct: 389 HYFRKELEYQANN 401
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 200/313 (63%), Positives = 243/313 (77%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EP
Sbjct: 67 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 125
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 150
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 126 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 185
Query: 151 PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNI 210
P +HPQ E YWG+VNP+G R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM++
Sbjct: 186 PEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 245
Query: 211 DDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGE 270
+DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E
Sbjct: 246 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 305
Query: 271 FTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLME 330
T+LE A+ +K L+ G EI+ + DDP++RKPDI KAK +LGWEP V L +GL
Sbjct: 306 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 365
Query: 331 EDFRSRLGVPKRN 343
FR L N
Sbjct: 366 HYFRKELEYQANN 378
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 200/313 (63%), Positives = 242/313 (77%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EP
Sbjct: 84 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 142
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 150
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 143 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 202
Query: 151 PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNI 210
P +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM++
Sbjct: 203 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 262
Query: 211 DDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGE 270
+DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E
Sbjct: 263 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 322
Query: 271 FTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLME 330
T+LE A+ +K L+ G EI+ + DDP++RKPDI KAK +L WEP V L +GL
Sbjct: 323 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIRKAKMMLAWEPVVPLEEGLNKAI 382
Query: 331 EDFRSRLGVPKRN 343
FR L N
Sbjct: 383 HYFRKELEYQANN 395
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 198/305 (64%), Positives = 243/305 (79%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE 89
MRILVTGGAGFIGSHL ++L+E + ++V+ DN+FTGSK N+ + + RFE+IRHD+ E
Sbjct: 1 MRILVTGGAGFIGSHLCERLLE-QGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIE 59
Query: 90 PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 149
P+L+EVD+IY+LACPASP+ Y+YNPVKTIKT+V+GT+NMLGLAKRV ARIL STSEVYG
Sbjct: 60 PILLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYG 119
Query: 150 DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMN 209
DP IHPQPE+YWGNVNPIG+RSCYDEGKRVAETL+ DYHRQ+G+ IRIARIFNTYGPRM
Sbjct: 120 DPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPRMA 179
Query: 210 IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPVNIGNP 268
DGRVVSNF+ QALRGE LTV G+QTRSFCYV D++DGL+ LME + GPVN+GNP
Sbjct: 180 EHDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCGPVNLGNP 239
Query: 269 GEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPL 328
E ++E A + + +I DDPRQR+PDI+ A+ +LGWEP+V L +GL
Sbjct: 240 EETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWEPRVSLDEGLAK 299
Query: 329 MEEDF 333
E F
Sbjct: 300 TIEYF 304
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
Identities = 196/318 (61%), Positives = 247/318 (77%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
++ RIL+TGGAGF+GSHLVDKLM + +EVI DNYFTG K N++ WIGHP FE++ HD
Sbjct: 134 ETRKRILITGGAGFVGSHLVDKLML-DGHEVIALDNYFTGRKKNVEHWIGHPNFEMVHHD 192
Query: 87 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 146
V P +EVDQIYHLA PASP Y YNPVKTIKTN +GT+NMLGLAKRV A +LL STSE
Sbjct: 193 VVNPYFVEVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRVKATVLLASTSE 252
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP 206
VYGDP +HPQPETYWG+VN IG R+CYDEGKRVAE+LM Y++Q I+IRIARIFNT+GP
Sbjct: 253 VYGDPEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIARIFNTFGP 312
Query: 207 RMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIG 266
RM+++DGRVVSNFI QAL+ +P+T+ GTQTRSF YV+D+VDGLI+LM + PVNIG
Sbjct: 313 RMHMNDGRVVSNFIIQALQDKPITIYGNGTQTRSFQYVTDLVDGLIKLMNSNYSLPVNIG 372
Query: 267 NPGEFTMLELAETVKELINPGI--EIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRD 324
NP E T+ + A +++L+ PG EI +E+ DDP+QR+PDI +A E + W P+V ++D
Sbjct: 373 NPEEHTIGQFATIIRDLV-PGSTSEIVNLESQQDDPQQRRPDIRRAAEQISWAPQVHMKD 431
Query: 325 GLPLMEEDFRSRLGVPKR 342
GL + FR+ + KR
Sbjct: 432 GLLKTVDYFRAEIDRNKR 449
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
Identities = 193/296 (65%), Positives = 235/296 (79%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EP
Sbjct: 88 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 146
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 150
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 147 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 206
Query: 151 PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNI 210
P +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+G RM++
Sbjct: 207 PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHM 266
Query: 211 DDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGE 270
+DGRVVSNFI QAL+GE LTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E
Sbjct: 267 NDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEE 326
Query: 271 FTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 326
T+LE A+ +K L+ I+ + DDP++R+PDI KAK LLGWEP V L +GL
Sbjct: 327 HTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGL 382
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 1031 (368.0 bits), Expect = 4.1e-104, P = 4.1e-104
Identities = 194/311 (62%), Positives = 241/311 (77%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
++ RIL+TGGAGF+GSHLVD LM + +EVIV DN+FTG K N++ W+GH FELI HD
Sbjct: 113 KNRKRILITGGAGFVGSHLVDDLMV-QGHEVIVVDNFFTGRKRNVEHWLGHENFELIHHD 171
Query: 87 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 146
+ PL IE+D+IYHLA PASP Y YNPVKTIKTN +GT+N+LGLAKRV A++L+ STSE
Sbjct: 172 IVNPLFIEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKVLIASTSE 231
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP 206
VYGDP +HPQPETYWG+VNPIG R+CYDEGKRV+ETL + Y +Q +Q+R+ARIFNTYGP
Sbjct: 232 VYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGP 291
Query: 207 RMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIG 266
RM+++DGRVVSNFI QALR E +TV G QTRSF YVSD+VDG+I LM T PVN+G
Sbjct: 292 RMHMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQPVNLG 351
Query: 267 NPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 326
NP E T+ E AE +K+L+ IK + DDP++RKPDI++A++LL WEPKV L GL
Sbjct: 352 NPVEQTIGEFAEIIKKLVGGPSVIKQSKAMEDDPQRRKPDITRARQLLHWEPKVPLETGL 411
Query: 327 PLMEEDFRSRL 337
FR+ L
Sbjct: 412 QRTISYFRNEL 422
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 116/157 (73%), Positives = 131/157 (83%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EP
Sbjct: 33 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 91
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 150
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 92 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 151
Query: 151 PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDY 187
P +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y
Sbjct: 152 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 98/133 (73%), Positives = 118/133 (88%)
Query: 112 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRS 171
YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA 61
Query: 172 CYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTV 231
CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GEPLTV
Sbjct: 62 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV 121
Query: 232 QKPGTQTRSFCYV 244
G+QTR+F YV
Sbjct: 122 YGSGSQTRAFQYV 134
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 91/120 (75%), Positives = 109/120 (90%)
Query: 112 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRS 171
YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA 61
Query: 172 CYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTV 231
CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GEPLTV
Sbjct: 62 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV 121
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 92/135 (68%), Positives = 115/135 (85%)
Query: 131 LAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 190
LAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q
Sbjct: 33 LAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 92
Query: 191 HGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDG 250
G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+G
Sbjct: 93 EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNG 152
Query: 251 LIRLMEGENTGPVNI 265
L+ LM + PVN+
Sbjct: 153 LVALMNSNVSSPVNL 167
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 92/135 (68%), Positives = 115/135 (85%)
Query: 131 LAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 190
LAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q
Sbjct: 33 LAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 92
Query: 191 HGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDG 250
G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+G
Sbjct: 93 EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNG 152
Query: 251 LIRLMEGENTGPVNI 265
L+ LM + PVN+
Sbjct: 153 LVALMNSNVSSPVNL 167
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 113/312 (36%), Positives = 168/312 (53%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSK---DNLKKWIGH-PRFELIRHD 86
+ L+TGGAGFIGSHL ++L+ N IV DN++ G D L K I P L ++
Sbjct: 4 KCLITGGAGFIGSHLAEELVGRGYNVTIV-DNFYKGKNKYHDELMKEIRVIPISVLDKNS 62
Query: 87 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 146
+ E L+ + D ++HLA ++ I+TN GT N+L A + +++ STSE
Sbjct: 63 IYE-LVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFASTSE 121
Query: 147 VYGD--PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTY 204
VYG P + + +G + I R Y K + ETL Y + G+ + I R FN Y
Sbjct: 122 VYGKAKPPFSEEGDRLYGATSKI--RWSYAICKTLEETLCLGYALE-GLPVTIVRYFNIY 178
Query: 205 GPRMNIDDGR---VVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTG 261
GPR DG V+ FI+ AL+GE + V G QTR F YVSD V+ IR M+ + G
Sbjct: 179 GPRAK--DGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEATIRAMDEKVNG 236
Query: 262 PV-NIGNPGEFTMLELAETVKELINPGIEIKMV---ENTP---DDPRQRKPDISKAKELL 314
+ NIG+ E ++ E+AE +K+L + +I V E P ++ R+PD++K K+L+
Sbjct: 237 EIINIGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLV 296
Query: 315 GWEPKVKLRDGL 326
++ KV DGL
Sbjct: 297 QFQAKVTWEDGL 308
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 94/318 (29%), Positives = 156/318 (49%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELI------- 83
+ +V GGAG IGSH VD+L++ + EVI+ DN+ G+++NL + + PR ++
Sbjct: 8 KFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGGDIN 67
Query: 84 RHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLT 142
+ D+ L VD ++H A Y+Y P +TN+ GT N+L G R++ +
Sbjct: 68 QTDILNTALKGVDGVFHFAALWLLQCYEY-PRSAFQTNIQGTFNVLETCVAQGVKRLVFS 126
Query: 143 STSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
S++ VYGD L P E + P R+ Y K E + YH ++G+ R N
Sbjct: 127 SSASVYGDALEEPMTEAH-----PFNSRTFYGATKIAGEAMATAYHHRYGLPFVGLRYMN 181
Query: 203 TYGPRMNIDDGRV-VSNFIAQAL-RGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENT 260
YGPR + + V + AL +G+P+T+ G+Q F YV D I M+ +
Sbjct: 182 VYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAANICAMKADTV 241
Query: 261 GPV-NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPK 319
N+G ++LELA+ ++++ I+ + + R KA E +G++ +
Sbjct: 242 DEYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTTFVKNRIGCPKKAAEQIGFKAE 301
Query: 320 VKLRDGLPLMEEDFRSRL 337
V L +GL + E RS +
Sbjct: 302 VGLTEGLQRLIEWRRSHI 319
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 102/308 (33%), Positives = 147/308 (47%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE--- 89
+VTGGAGFIGSH+VD L++ +V V DN G + NL+ +P D+ E
Sbjct: 7 IVTGGAGFIGSHMVDLLLDCGF-QVRVIDNLKGGHRRNLEHRANNPDLTFEIKDICELSA 65
Query: 90 --PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TSTSE 146
PL VD ++H A + NP+ ++TNV+GT+ +L A+ + L+ ++S
Sbjct: 66 PHPLFENVDYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKKLVYAASSS 125
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP 206
YG + P E + PI + Y K + E F + + +G+ + RIFN YG
Sbjct: 126 CYGLADV-PTREDH-----PIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNAYGT 179
Query: 207 RMNIDD--GRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPV- 263
R+ G V F Q L +P TV GTQ R F YV+D+ ++ E G
Sbjct: 180 RVRTTGVYGAVFGVFFKQKLADKPFTVVGDGTQRRDFLYVTDVARAFLKAAETRKVGETW 239
Query: 264 NIG--NPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVK 321
N+G NP L ELI G E++ + P +P DISK K LGWEP +
Sbjct: 240 NLGAGNPQSINRLV------ELI--GGEVEYIPKRPGEPDCTWADISKIKRDLGWEPTIT 291
Query: 322 LRDGLPLM 329
DG+ M
Sbjct: 292 FADGVSRM 299
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 99/317 (31%), Positives = 148/317 (46%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD-VT 88
MR LVTG AGFIGS LVD+L+ + + V+ DN+ TG NL+ + + D VT
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLA-DGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVT 59
Query: 89 EPLLIEVDQ-----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLT 142
L ++Q ++HLA +P NVIGT+ + A++ G R I+ T
Sbjct: 60 ADLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHT 119
Query: 143 STS-EVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIF 201
S+ +YG P +P PET P S Y GK E + + +G+
Sbjct: 120 SSGGSIYGTPPEYPTPETA-----PTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPA 174
Query: 202 NTYGPRMNID-DGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENT 260
N YGPR + + VV+ F L G+P V GT TR + +V D+VD +R+
Sbjct: 175 NVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRVSADVGG 234
Query: 261 G-PVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPK 319
G NIG E + +L V + + + D ++ DI A+ +LGW P+
Sbjct: 235 GLRFNIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLGDLKRSCLDIGLAERVLGWRPQ 294
Query: 320 VKLRDGLPLMEEDFRSR 336
++L DG+ E FR +
Sbjct: 295 IELADGVRRTVEYFRHK 311
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 100/313 (31%), Positives = 142/313 (45%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENE------KNEVIVADNY-FTGSKDNLKKWIGHPRFEL 82
M+ILVTGGAGFIGSH V L+ + +V V D + G+ NL + PRF
Sbjct: 1 MKILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSF 60
Query: 83 IRHDVTEPLLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--V 135
+R D+ + LIE D + H A + +N++GT +L A R +
Sbjct: 61 VRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHI 120
Query: 136 GARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQI 195
G R L ST EVYG I W +P+ S Y K ++ L YH+ HG+ +
Sbjct: 121 G-RFLHVSTDEVYGS--IDTGS---WAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDV 174
Query: 196 RIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
+ R N YGPR + +++ F+ + L G + V G R + +VSD GL +
Sbjct: 175 VVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALAL 232
Query: 256 EGENTGPV-NIGNPGEFTMLELAETVKELIN-PGIEIKMVENTPDDPRQRKPDISKAKEL 313
G V +IG E T LEL E + E P I V + R+ D SK
Sbjct: 233 GAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDRRYSLDYSKIAGE 292
Query: 314 LGWEPKVKLRDGL 326
LG+ P+V DG+
Sbjct: 293 LGYRPRVDFTDGI 305
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 95/313 (30%), Positives = 148/313 (47%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKN-EVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 89
+LVTGGAGFIGSHL+ L + +I DN + + NL+ + I DV +
Sbjct: 9 VLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDVCD 68
Query: 90 PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 141
PL I+ +D ++H A P + ++ NV GT ++ + R +
Sbjct: 69 PLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQRFIY 128
Query: 142 TSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIF 201
ST EVYGD + P E ++P + Y K AE+++ Y +H I R
Sbjct: 129 ISTDEVYGDSVDQPFDE-----LSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRSS 183
Query: 202 NTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTG 261
N YGPR + + +V+ F++ + + T+Q G Q+R F YVSD+ D + +ME G
Sbjct: 184 NVYGPRQHHE--KVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDVTDAFLTVMEKGILG 241
Query: 262 PV-NIGNPGEFTMLELAE-----TVKELINPGIE--IKMVENTPDDPRQRKPDISKAKEL 313
+ NIG E +++LA TVK + ++ ++ VE+ P R P S
Sbjct: 242 EIYNIGTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVEDRPVT-ELRYPMNSVKLHR 300
Query: 314 LGWEPKVKLRDGL 326
LGW PKV +G+
Sbjct: 301 LGWRPKVAWTEGI 313
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 100/320 (31%), Positives = 153/320 (47%)
Query: 32 ILVTGGAGFIGSHLVDKLMENE-KNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
ILVTG GFIGSHL + L++ K + N F +L+K E++ D+ +
Sbjct: 4 ILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFN-FWGHLEKSPFLKDMEVVSGDLRDS 62
Query: 91 LLIE-----VDQIYHL-ACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVG-ARILLT 142
E +D I+HL A A P Y Y P + TNV GTLNML AK+ + + T
Sbjct: 63 FFCEKITKNIDAIFHLGALIAIP--YSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHT 120
Query: 143 STSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
STSEVYG P E + P+ +S Y K A+ + Y+ + + IAR FN
Sbjct: 121 STSEVYGTAFYVPIDEKH-----PLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPFN 175
Query: 203 TYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGP 262
TYGPR + ++ I Q L G + R +V D +G I L+ ++ G
Sbjct: 176 TYGPRQSAR--AIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNLKHFGE 233
Query: 263 V-NIGNPGEFTMLELAETVKELINPGIEIKMVENT--PDDPRQRKP--DISKAKELLGWE 317
V NIG+ E++M E+ ++++++ ++I E P + + D +K K+ W+
Sbjct: 234 VYNIGSGVEYSMQEVLNLIQKILDSKVKIIQDEQRLRPKNSEVFRLCCDANKLKKATNWQ 293
Query: 318 PKVKLRDGLPLMEEDFRSRL 337
K+ L +GL E F+ L
Sbjct: 294 SKISLEEGLRQSIEYFKENL 313
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 262 (97.3 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 78/268 (29%), Positives = 130/268 (48%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN--VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRIARIF 201
SEVYG E + N V P+ R Y K++ + +++ Y + G+Q + R F
Sbjct: 433 SEVYGMCSDKYFDEDH-SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPF 491
Query: 202 NTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
N GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 492 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 551
Query: 256 EGENT---GPV-NIGNP-GEFTMLELAE 278
E G + NIGNP E ++ EL E
Sbjct: 552 ENAGNRCDGEIINIGNPENEASIEELGE 579
Score = 70 (29.7 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 263 VNIGNP-GEFTMLELAETV-----KELIN----PGIEIKMVENTP------DDPRQRKPD 306
+NIGNP E ++ EL E + K + P ++VE++ D RKP
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622
Query: 307 ISKAKELLGWEPKVKLRD 324
I A L WEPK+ +++
Sbjct: 623 IRNAHRCLDWEPKIDMQE 640
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 94/306 (30%), Positives = 139/306 (45%)
Query: 32 ILVTGGAGFIGSHLVDKLME--NEKNEVIVADNYFT--GSKDNLKKWIGHPRFELIRHDV 87
+LVTG AGFIGS V L+ + V+ A + T G+ DNL GHPR+ R D+
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64
Query: 88 TE-P---LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLT 142
+ P ++ DQ+ HLA + + ++TNV GT +L A R G A +
Sbjct: 65 CDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQV 124
Query: 143 STSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
ST EVYG L H W P+ S Y K + L +H HG+ +R+ R N
Sbjct: 125 STDEVYGS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSN 179
Query: 203 TYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGP 262
YGPR + +++ FI + G + + G R + +V D V G+ + G
Sbjct: 180 NYGPRQFPE--KLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAGR 237
Query: 263 V-NIGNPGEFTMLELAETVKELINPGI-EIKMVENTPDDPRQRKPDISKAKELLGWEPKV 320
V NIG + EL + E ++ VE+ R+ D ++ + LG+ P V
Sbjct: 238 VYNIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAV 297
Query: 321 KLRDGL 326
L DGL
Sbjct: 298 DLADGL 303
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 252 (93.8 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 76/269 (28%), Positives = 133/269 (49%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ ++K +V D GS D +++ HP F + D++
Sbjct: 320 RVLILGVNGFIGNHLSERLLRDDKYDVYGLD---IGS-DAIERLRSHPNFHFVEGDISIH 375
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + R++ ST
Sbjct: 376 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPST 435
Query: 145 SEVYG---DPLIHPQPETYWGNVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
SEVYG D V PI R Y K++ + +++ Y + G+ + R
Sbjct: 436 SEVYGMCQDKNFDEDTSNLI--VGPINKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRP 492
Query: 201 FNTYGPRMN-IDDGRV-----VSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRL 254
FN GPR++ +D R+ ++ I + G P+ + G Q R F ++D ++ L R+
Sbjct: 493 FNWMGPRLDRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARI 552
Query: 255 MEGEN---TGPV-NIGNP-GEFTMLELAE 278
++ EN G + NIGNP E ++ +L E
Sbjct: 553 VDNENDCCNGQIINIGNPDNEASIRQLGE 581
Score = 72 (30.4 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 299 DPRQRKPDISKAKELLGWEPKVKLRD 324
D RKP I AK LL WEP V++ +
Sbjct: 617 DVEHRKPSIDNAKRLLNWEPTVEMSE 642
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 296 (109.3 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 91/311 (29%), Positives = 146/311 (46%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKN-EVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 89
IL+TG AGFI SH+ ++L+ N + +++V D + NL P F+ ++ D+
Sbjct: 11 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKGDIAS 70
Query: 90 P-----LLI--EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 140
LLI +D I H A N + K N+ GT +L K G R +
Sbjct: 71 DDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 130
Query: 141 LTSTSEVYGDPLIHPQPETYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIA 198
ST EVYG+ + GN + + + Y K AE L+ Y R +G+ +
Sbjct: 131 HVSTDEVYGET----DEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 186
Query: 199 RIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL-IRLMEG 257
R N YGP N +++ FI A+ G+PL + G+ RS+ Y D+ + + L +G
Sbjct: 187 RGNNVYGP--NQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 244
Query: 258 ENTGPVNIGNPGEFTMLELAETVKELI--NPGIEIKMVENTPDDPRQRKPDISKAKELLG 315
E N+G E ++++A + +L +P I+ VEN P + ++ D K K+L G
Sbjct: 245 EIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKL-G 303
Query: 316 WEPKVKLRDGL 326
W+ + DGL
Sbjct: 304 WQERTNWEDGL 314
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 295 (108.9 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 92/311 (29%), Positives = 148/311 (47%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKN-EVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 89
IL+TG AGFI SH+ ++L+ + + +++V D + + NL P F+ ++ D+
Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS 68
Query: 90 P-----LLI--EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 140
LLI E+D I H A N + K N+ GT +L K G R +
Sbjct: 69 ADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
Query: 141 LTSTSEVYGDPLIHPQPETYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIA 198
ST EVYG+ + GN + + + Y K AE L+ Y R +G+ +
Sbjct: 129 HVSTDEVYGET----DEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 199 RIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL-IRLMEG 257
R N YGP N +++ FI A+ G+PL + G+ RS+ Y D+ + + L +G
Sbjct: 185 RGNNVYGP--NQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 242
Query: 258 ENTGPVNIGNPGEFTMLELAETVKEL--INPGIEIKMVENTPDDPRQRKPDISKAKELLG 315
E NIG E ++++A + +L I+P I+ VEN P + ++ D K K+L G
Sbjct: 243 EVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKL-G 301
Query: 316 WEPKVKLRDGL 326
W + +GL
Sbjct: 302 WCERTNWEEGL 312
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 106/317 (33%), Positives = 146/317 (46%)
Query: 31 RILVTGGAGFIGSHLVDKL-MENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRH---- 85
+ILVTG GFIGSHL + L M V N F N W+ H EL++
Sbjct: 7 KILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSF-----NSWGWLDHLDPELLKSLDVF 61
Query: 86 --DVTEPLLIE-----VDQIYHLACP-ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG- 136
D+ +P + D + HLA A P Y ++P + TNV GTLN++ A+ +G
Sbjct: 62 AGDIRDPHGVREAMKGCDVVLHLAALIAIPYSY-HSPDTYVDTNVKGTLNVVQAARELGV 120
Query: 137 ARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
A+++ TSTSEVYG P E + P+ +S Y K A+ + ++ +
Sbjct: 121 AKVVHTSTSEVYGTARFVPITEEH-----PLQGQSPYSASKIGADQIAMSFYSSFDTPVA 175
Query: 197 IARIFNTYGPRMNIDDG-RVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
I R FNTYGPR + V IA R L P TR YV+D V G I +
Sbjct: 176 IIRPFNTYGPRQSARAFIPTVITQIASGARTLRLGALHP---TRDLNYVADTVAGFIAVA 232
Query: 256 EGENT-GPV-NIGNPGEFTMLELAETVKELINPGIEIKM-VENT-PDDPRQRK--PDISK 309
E E + G V NIG+ E +M E A + +++ +EI E PD + D SK
Sbjct: 233 ESEKSVGEVINIGSNFEISMGETARMIADVMGADVEIVTDAERLRPDKSEVERLWADTSK 292
Query: 310 AKELLGWEPKVKLRDGL 326
AK LL +DGL
Sbjct: 293 AKRLLDHGQNYGGKDGL 309
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 88/308 (28%), Positives = 144/308 (46%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
M+ILVTGGAGFIGS V K + +E+I+ D + G +++ R + + DV
Sbjct: 1 MKILVTGGAGFIGSAFVRKYAYD--HELIIVDKLTYAGDLRRIEEV--RDRIKFYKADVA 56
Query: 89 EPLLIEV-------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 140
+ IE + + H A + +P I+TNV GT ML +++ G + +
Sbjct: 57 DKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIEKFV 116
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
ST EVYG+ E + +P+ S Y K A+ L YHR +G+ + +AR
Sbjct: 117 HISTDEVYGEL----GKEGQFTEESPLRPNSPYSVSKAAADMLARAYHRTYGLPVIVARP 172
Query: 201 FNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENT 260
N YGP + +++ I +AL EP+ V G R + YV D ++ + L++
Sbjct: 173 CNNYGPWQYPE--KLIPVVIKKALNNEPIPVYGQGLNVREWLYVDDCIEAVYLLLQKGKP 230
Query: 261 GPV-NIGNPGEFTMLELAETVKELIN-PGIEIKMVENTPDDPRQRKPDISKAKELLGWEP 318
G NIG+ E +E+ + + ++ P I VE+ P + + K K W+
Sbjct: 231 GEAYNIGSGEEKGNIEVVKEILRILGKPESLITFVEDRPGHDFRYSLNSKKIKMNYAWKH 290
Query: 319 KVKLRDGL 326
KV +G+
Sbjct: 291 KVNFNEGI 298
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 92/321 (28%), Positives = 145/321 (45%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIV-ADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
R+LVTGGAGFI SH++ L+E+ N +I+ D + S NL+ ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78
Query: 89 EP----LLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 140
+ LL E +D + H A + NV GT ++ A + +
Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
ST EVYG L E+ +P + Y K AE + Y Q+ + I R
Sbjct: 139 YVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRS 193
Query: 201 FNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENT 260
N YGP + +V+ FI+ + G QTR+F Y +D+V+ + +++
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKP 251
Query: 261 GPV-NIGNPGEFTMLELAETVKELINPGIEIKMVENTPD--DPR----QRKPDISKAKEL 313
G + NIG E ++L+LA+ + +LI +EN D D R R P S+
Sbjct: 252 GEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHG 311
Query: 314 LGWEPKVKLRDGLPLMEEDFR 334
LGW PKV ++G+ E +R
Sbjct: 312 LGWRPKVPWKEGIKKTIEWYR 332
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 86/309 (27%), Positives = 144/309 (46%)
Query: 30 MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDV 87
M ILVTGGAGFIGS+ V ++++ E ++I D ++G+ +N+K HP + ++ ++
Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60
Query: 88 TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARI 139
L+E V I + A + NP+ TNVIGT+ +L L K+ ++
Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKL 120
Query: 140 LLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
+ ST EVYG L T P+ S Y K A+ + Y++ + + + + R
Sbjct: 121 VQVSTDEVYGS-LGKTGRFT---EETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTR 176
Query: 200 IFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGEN 259
N YGP + +++ + AL G+ L + G R + +V+D + ++
Sbjct: 177 CSNNYGPYQYPE--KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR 234
Query: 260 TGPV-NIGNPGEFTMLELAETVKELINPGI-EIKMVENTPDDPRQRKPDISKAKELLGWE 317
G V NIG E T +E+ E + L+ +I+ V + R+ + K K WE
Sbjct: 235 VGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWE 294
Query: 318 PKVKLRDGL 326
PK GL
Sbjct: 295 PKYTFEQGL 303
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 283 (104.7 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 91/311 (29%), Positives = 146/311 (46%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKN-EVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 89
IL+TG AGFI SH+ ++L+ + + +++V D + + NL P F+ ++ D+
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIAS 68
Query: 90 P-----LLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 140
LLI +D I H A N + K N+ GT +L K G R +
Sbjct: 69 ADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
Query: 141 LTSTSEVYGDPLIHPQPETYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIA 198
ST EVYG+ + GN + + + Y K AE L+ Y R +G+ +
Sbjct: 129 HVSTDEVYGET----DEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 199 RIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL-IRLMEG 257
R N YGP N +++ FI A+RG+ L + G+ RS+ Y D+ + + L +G
Sbjct: 185 RGNNVYGP--NQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 242
Query: 258 ENTGPVNIGNPGEFTMLELAETVKELIN--PGIEIKMVENTPDDPRQRKPDISKAKELLG 315
E NIG E + ++A+ + +L N P IK V+N P + ++ D K K+L G
Sbjct: 243 EVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKL-G 301
Query: 316 WEPKVKLRDGL 326
W + +GL
Sbjct: 302 WSERTTWEEGL 312
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 91/321 (28%), Positives = 147/321 (45%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIV-ADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
R+LVTGGAGFI SH++ L+E+ N +I+ D + S NL+ ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78
Query: 89 EP----LLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 140
+ LL E +D + H A + NV GT ++ A + +
Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
ST EVYG L E+ +P + Y K AE + Y Q+ + I R
Sbjct: 139 YVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRS 193
Query: 201 FNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENT 260
N YGP + +V+ FI+ + G QTR+F Y +D+V+ + +++
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKP 251
Query: 261 GPV-NIGNPGEFTMLELAETVKELI---NPGIEIK-MVENTPDDPRQ--RKPDISKAKEL 313
G + NIG E ++++LA+ + +LI N E++ V+ D P R P S+
Sbjct: 252 GEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHG 311
Query: 314 LGWEPKVKLRDGLPLMEEDFR 334
LGW PKV ++G+ E +R
Sbjct: 312 LGWRPKVPWKEGIKKTIEWYR 332
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 91/321 (28%), Positives = 147/321 (45%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIV-ADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
R+LVTGGAGFI SH++ L+E+ N +IV D + S NL+ ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLKNLETISDKQNYKFIQGDIC 78
Query: 89 EP----LLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 140
+ LL E +D + H A + NV GT +L A + +
Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAHEARVEKFI 138
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
ST EVYG L E+ +P + Y K AE + Y ++ + I R
Sbjct: 139 YVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRS 193
Query: 201 FNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENT 260
N YGP + +V+ FI+ + G QTR+F Y +D+V+ + +++
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKP 251
Query: 261 GPV-NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKP-DIS---KAKEL-- 313
G + NIG E ++L+LA+ + +LI +EN D R D+ K++++
Sbjct: 252 GEIYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVDYVNDRPTNDMRYPMKSEKIHG 311
Query: 314 LGWEPKVKLRDGLPLMEEDFR 334
LGW PKV ++G+ E +R
Sbjct: 312 LGWRPKVPWKEGIKKTIEWYR 332
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 91/321 (28%), Positives = 146/321 (45%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIV-ADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
R+LVTGGAGFI SH++ L+E+ + +IV D + S NL+ ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78
Query: 89 EP----LLIEVDQI---YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 140
+ LL EV++I H A + NV GT ++ A G + +
Sbjct: 79 DSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFI 138
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
ST EVYG L E+ +P + Y K AE + Y ++ + I R
Sbjct: 139 YVSTDEVYGGSLDQEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRS 193
Query: 201 FNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENT 260
N YGP + +V+ FI+ + G Q R+F Y +D+V+ + ++
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEP 251
Query: 261 GPV-NIGNPGEFTMLELAETVKELI---NPGIEIKM-VENTPDDPRQ--RKPDISKAKEL 313
G + NIG E ++++LA+ + +LI N E + V+ D P R P S+
Sbjct: 252 GEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHS 311
Query: 314 LGWEPKVKLRDGLPLMEEDFR 334
LGW+PKV +G+ E +R
Sbjct: 312 LGWKPKVPWEEGIKKTVEWYR 332
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 86/313 (27%), Positives = 143/313 (45%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIV-ADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
R+LVTGGAGFI SH+V L+ N N +I+ D + S NL+ ++ I+ D+
Sbjct: 24 RLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASLKNLETVSEKENYKFIQGDIC 83
Query: 89 EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 140
EP I+ +D + H A ++ ++ NV GT ++ A + +
Sbjct: 84 EPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAHEANVEKFV 143
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
ST EVYG E+ +P + Y K AE + Y ++ + I R
Sbjct: 144 YVSTDEVYGGSTDQEFDES-----SPKCPTNPYASSKAAAECFVQSYWERYQFPVVITRS 198
Query: 201 FNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENT 260
N YGP + +V+ FI+ + + G Q R+F Y +D+V+ + +++
Sbjct: 199 SNVYGPHQYPE--KVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEGKP 256
Query: 261 GPV-NIGNPGEFTMLELAETVKELINP-GIEIKM---VENTPDDPRQ--RKPDISKAKEL 313
G + NIG E ++++LA+ + LI E +M ++ D P R P S+
Sbjct: 257 GEIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHWMDYVKDRPTNDLRYPMSSEKMHN 316
Query: 314 LGWEPKVKLRDGL 326
LGW PKV ++G+
Sbjct: 317 LGWRPKVPWKEGI 329
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 88/308 (28%), Positives = 145/308 (47%)
Query: 29 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT 88
N++I +TG GFI SH+ +L ++E + VI +D +++ + + F L+ V
Sbjct: 27 NLKISITGAGGFIASHIARRL-KHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVM 82
Query: 89 EPLL--IE-VDQIYHLACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 143
E L E VD +++LA + F + N + N + + NM+ A+ G R S
Sbjct: 83 ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 142
Query: 144 TSEVYGD--PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIF 201
++ +Y + L + P + Y K E L Y++ GI+ RI R
Sbjct: 143 SACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFH 202
Query: 202 NTYGPRMNIDDGR--VVSNFIAQALRG-EPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGE 258
N YGP GR + F +A + + G QTRSF ++ + V+G++RL + +
Sbjct: 203 NIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 262
Query: 259 NTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEP 318
PVNIG+ +M E+AE V + I + P+ R R D + KE LGW P
Sbjct: 263 FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG-PEGVRGRNSDNNLIKEKLGWAP 321
Query: 319 KVKLRDGL 326
++L++GL
Sbjct: 322 NMRLKEGL 329
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 89/313 (28%), Positives = 142/313 (45%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIV-ADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
R+LVTGGAGFI SH++ L+E+ N +I+ D + S NL+ ++ I+ D+
Sbjct: 19 RLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78
Query: 89 EP----LLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 140
LL E +D + H A + NV GT ++ A + +
Sbjct: 79 NSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
ST EVYG L E+ +P + Y K AE + Y ++ I R
Sbjct: 139 YVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPAVITRS 193
Query: 201 FNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENT 260
N YGP + +V+ FI+ + G QTR+F Y +D+V+ + +++
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKP 251
Query: 261 GPV-NIGNPGEFTMLELAETVKELINP-GIEIKM---VENTPDDPRQ--RKPDISKAKEL 313
G + NIG E ++L+LA+ + +LI E +M V+ D P R P S+ +
Sbjct: 252 GEIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVNDRPTNDMRYPMKSEKIQG 311
Query: 314 LGWEPKVKLRDGL 326
LGW PKV ++G+
Sbjct: 312 LGWRPKVPWKEGI 324
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 93/319 (29%), Positives = 148/319 (46%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNL---------KKWIGHPRFELI 83
L+TG AGFIGS+L+++L++ + VI DN+ TG + NL ++W+ RF I
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQT-VIGLDNFATGRQHNLDEVQSLVTSEQWM---RFSFI 74
Query: 84 RHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
D+ + + E VD + H A S +P+ T N+ G LNML AK +
Sbjct: 75 NGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK 134
Query: 139 -ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRI 197
++S YGD P+ E GN P+ S Y K V E Y R +G +
Sbjct: 135 SFTYAASSSTYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYGFETIG 189
Query: 198 ARIFNTYGPRMNIDDG--RVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDG--LIR 253
R FN +G R + + V+ + + ++GE + + G +R FCY+ ++V L
Sbjct: 190 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNILAA 249
Query: 254 LMEGENTGPV-NIGNPGEFTMLELAETVKELINP-GIEIKMVENTPD----DPRQRKPDI 307
E V N+ T+ +L +K+ +N GI + N D D R + D+
Sbjct: 250 TAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRHSQADV 309
Query: 308 SKAKELLGWEPKVKLRDGL 326
SKA LG++ K+ +G+
Sbjct: 310 SKAVTRLGYQYTHKILEGI 328
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 93/319 (29%), Positives = 148/319 (46%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNL---------KKWIGHPRFELI 83
L+TG AGFIGS+L+++L++ + VI DN+ TG + NL ++W+ RF I
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQT-VIGLDNFATGRQHNLDEVQSLVTSEQWM---RFSFI 74
Query: 84 RHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
D+ + + E VD + H A S +P+ T N+ G LNML AK +
Sbjct: 75 NGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK 134
Query: 139 -ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRI 197
++S YGD P+ E GN P+ S Y K V E Y R +G +
Sbjct: 135 SFTYAASSSTYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYGFETIG 189
Query: 198 ARIFNTYGPRMNIDDG--RVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDG--LIR 253
R FN +G R + + V+ + + ++GE + + G +R FCY+ ++V L
Sbjct: 190 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNILAA 249
Query: 254 LMEGENTGPV-NIGNPGEFTMLELAETVKELINP-GIEIKMVENTPD----DPRQRKPDI 307
E V N+ T+ +L +K+ +N GI + N D D R + D+
Sbjct: 250 TAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRHSQADV 309
Query: 308 SKAKELLGWEPKVKLRDGL 326
SKA LG++ K+ +G+
Sbjct: 310 SKAVTRLGYQYTHKILEGI 328
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 98/335 (29%), Positives = 156/335 (46%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNY----FTGSKDNLKKWIGH-PRFELIRHD 86
+L+TGG GFIGS+ ++ KN + NY F S +++K I PR++ +
Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFI--NYDKLAFGASPLHVEKEIRESPRYKFVEAA 68
Query: 87 VTE-PLLI------EVDQIYHLACPASPIFYKYNP-VKTIKTNVIGTLNMLGL---AKRV 135
+ + P LI EVD + H A + + Y+ + TI+ N+I T +L +
Sbjct: 69 LEDQPTLIKTLQENEVDMVIHFAA-ITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYK 127
Query: 136 GARILL-TSTSEVYGDPLIHPQPETYWGNV-NPIGVRSCYDEGKRVAETLMFDYHRQHGI 193
G + L+ ST EVYGD P++ ++ NP Y K E ++ Y + +
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNP---YAASKAACEMVIRSYWHSYKL 184
Query: 194 QIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
+ R+ N YGPR I +++ F AL G+P + G TRS+ YV D + + R
Sbjct: 185 PYVMVRMNNVYGPRQ-IHT-KLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAITR 242
Query: 254 L-MEGENTGPV-NIGNPGEFTMLELAE----TVKELINPGIEIKMVENTPDDP---RQRK 304
+ +EG G + NIG E T +EL + TV +L+N PD P R+
Sbjct: 243 VALEG-TLGEIYNIGTDFEMTNIELTKMIHFTVSKLLNREPTAPTFAPIPDRPYHDRRYY 301
Query: 305 PDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGV 339
D SK + +GW+ +GL + D+ +L V
Sbjct: 302 IDFSKIRNAMGWQCTTPFSEGL-MKTIDYYVKLHV 335
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 86/321 (26%), Positives = 143/321 (44%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIV-ADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
R+LVTGGAGFI SH++ L+E+ N +I+ D + S NL+ ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78
Query: 89 EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 140
+ ++ +D + H A + NV GT ++ A + +
Sbjct: 79 DSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVEKFI 138
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
ST EVYG L E+ +P + Y K AE + Y ++ + I R
Sbjct: 139 YVSTDEVYGGSLDQEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRS 193
Query: 201 FNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENT 260
N YGP + +V+ FI+ + G Q R+F Y +D+V+ + ++
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEP 251
Query: 261 GPV-NIGNPGEFTMLELAETVKELI---NPGIEI-KMVENTPDDPRQ--RKPDISKAKEL 313
G + NIG E ++++LA+ + +LI N E + V+ D P R P S+
Sbjct: 252 GEIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHNDMRYPMKSEKIHS 311
Query: 314 LGWEPKVKLRDGLPLMEEDFR 334
LGW+PKV +G+ E +R
Sbjct: 312 LGWKPKVPWEEGIKKTVEWYR 332
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 94/303 (31%), Positives = 152/303 (50%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGH-PRFELIRHDVTEP 90
+LVTGG GFIGSHLVD L+ ++ +V V DN GS +NLK G + E+I ++T+
Sbjct: 4 VLVTGGCGFIGSHLVDALL-SQGFKVRVMDNLSNGSLENLK--CGQRDKLEIINGNLTDK 60
Query: 91 LLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 144
L++ + ++HLA A+ + ++ N + T N+L +R R++ S+
Sbjct: 61 FLLDSAVKGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRRNRVDRLVFASS 120
Query: 145 SEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTY 204
+ VYG+ + E Y G + PI S Y K E L+ Y +G++ + R N
Sbjct: 121 AAVYGESGLTVLDEDY-GPLLPI---SLYGASKLAGEGLISAYSHLYGLKATMFRFANIV 176
Query: 205 GPRMNIDDGRVVSNFIAQALRGEP--LTVQKPGTQTRSFCYVSDMVDGLIRLMEG--ENT 260
G R + G V+ +F+++ LR P L V G+Q++ + +VSD V G++ E +N
Sbjct: 177 GSRRH--SG-VIYDFVSR-LRQNPSSLLVLGDGSQSKPYLHVSDCVAGMLLGFEKSTKNL 232
Query: 261 GPVNIGNPGEFTMLELAETVKE---LINPGIEIKMVENT-PDDPRQRKPDISKAKELLGW 316
G N+G P + ++A V L N E D Q + DIS+ + L G+
Sbjct: 233 GLYNLGTPDSVAVRDIACLVASEMGLKNVCYSYSGGERGWQGDAPQVRFDISRIRTL-GF 291
Query: 317 EPK 319
+PK
Sbjct: 292 KPK 294
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 84/300 (28%), Positives = 134/300 (44%)
Query: 30 MRILVTGGAGFIGSHLVD-KLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDV 87
MR+LVTGGAGFIG++ V L E + + V D + GS+++L R L++ D+
Sbjct: 1 MRLLVTGGAGFIGANFVHLALREARTSSITVLDALTYAGSRESLAPVAD--RIRLVQGDI 58
Query: 88 TEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 142
T+ L+ E D + H A +P + +NV+GT +L +R R+
Sbjct: 59 TDAALVGDLVAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVRLHHV 118
Query: 143 STSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
ST EVYGD L P + P S Y K A+ L+ + R +G++ I+ N
Sbjct: 119 STDEVYGD-LELDNPARF-NETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNCSN 176
Query: 203 TYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGP 262
YGP +++ + + I L G + G R + +V D + R++ G
Sbjct: 177 NYGPYQHVE--KFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVWRILTDGTIGR 234
Query: 263 VN-IGNPGEFTMLELAETVKELI--NPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPK 319
IG E L + T+ +L+ +P + + D R D S ++ LGW PK
Sbjct: 235 TYLIGAECERNNLTVMRTILKLMGRDPDDFDHVTDRAGHDLRYAI-DPSTLQDELGWAPK 293
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 247 (92.0 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 80/283 (28%), Positives = 132/283 (46%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKN-EVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
+IL+TGGAGFIGSHL L + KN ++IV D + + +NL + F+ + ++
Sbjct: 11 KILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNIL 70
Query: 89 EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-IL 140
+ L+E +D + HLA +K + N++GT +L K + +
Sbjct: 71 DSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLKKFI 130
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNP-------IGVRSCYDEGKRVAETLMFDYHRQHGI 193
ST EVYG LI + ++N + + Y K AE L+ Y++ +
Sbjct: 131 YVSTDEVYGSGLIEDNDDNN-NSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFKL 189
Query: 194 QIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL-I 252
+ I R N YGP+ + +++ FI L + T+ G TR++ Y+ D+V I
Sbjct: 190 PVIITRANNIYGPKQYPE--KIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDI 247
Query: 253 RLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVEN 295
L +GE NIG E + L++A K++IN I + N
Sbjct: 248 ILRKGEIGNVYNIGTDFEISNLDVA---KKIINISINLNNNNN 287
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 85/308 (27%), Positives = 136/308 (44%)
Query: 30 MRILVTGGAGFIGSHLVDKLM-ENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDV 87
MR+LVTGGAGFIG++ V + E+ + V V D + G +++L L++ D+
Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADV--EDAIRLVQGDI 58
Query: 88 TEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 142
T+ L+ E D + H A + NP + TNVIGT +L +R G R+
Sbjct: 59 TDAELVSQLVAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHI 118
Query: 143 STSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
ST EVYGD + + P S Y K A+ L+ + R +G++ I+ N
Sbjct: 119 STDEVYGD--LELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSN 176
Query: 203 TYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGP 262
YGP +++ + + I L G + G R + +V D + R+++ G
Sbjct: 177 NYGPYQHVE--KFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRILDRGRIGR 234
Query: 263 VN-IGNPGEFTMLELAETVKELIN--PGIEIKMVENTPDDPRQRKPDISKAKELLGWEPK 319
I + GE L + T+ L++ P + + D R D S + L W PK
Sbjct: 235 TYLISSEGERDNLTVLRTLLRLMDRDPDDFDHVTDRVGHDLRYAI-DPSTLYDELCWAPK 293
Query: 320 -VKLRDGL 326
+GL
Sbjct: 294 HTDFEEGL 301
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 90/311 (28%), Positives = 139/311 (44%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNL----KKWIGHPRFELIRHDV 87
IL+ GGAG+IGSH V KL++ E V+V DN TG +D + K + G R + DV
Sbjct: 4 ILICGGAGYIGSHAVKKLVD-EGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDV 62
Query: 88 TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 146
IE + H A + P++ NV G L +L + + + +ST+
Sbjct: 63 FTQENIEA--VMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAA 120
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP 206
YG+ + E NP Y E K E ++ Y + ++ +I R FN G
Sbjct: 121 TYGEVDVDLITEETM--TNPTNT---YGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGA 175
Query: 207 RMN-I--DDGRVVSNFIAQALR---GEPLTVQK-------P-GTQTRSFCYVSDMVD--- 249
N I +D R ++ I L+ G+ + P GT R + +V D+V
Sbjct: 176 TPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHF 235
Query: 250 -GLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDIS 308
GL L G + N+GN F++ E+ + V+E+ N I ++ DP +
Sbjct: 236 LGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQ 295
Query: 309 KAKELLGWEPK 319
KAKE LGW+P+
Sbjct: 296 KAKEKLGWDPR 306
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 238 (88.8 bits), Expect = 6.7e-20, P = 6.7e-20
Identities = 88/315 (27%), Positives = 140/315 (44%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKN-EVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 89
I+VTGGAGFIGS+ V + N + V V D + G++ NL++ +G R EL+ D+ +
Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEILGD-RVELVVGDIAD 65
Query: 90 PLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
L++ D I H A + +P I TN +GT +L A++ R ST
Sbjct: 66 SELVDKLAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIRFHHVST 125
Query: 145 SEVYGD-PLIHPQP-------ETYWGNV--NPIGVRSCYDEGKRVAETLMFDYHRQHGIQ 194
EVYGD PL P E + NP S Y K ++ ++ + R G++
Sbjct: 126 DEVYGDLPLREDLPGHGEGPGEKFTAETKYNP---SSPYSSTKAASDLIVKAWVRSFGVK 182
Query: 195 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRL 254
I+ N YGP +I+ + + I L G + G R + + +D G+ +
Sbjct: 183 ATISNCSNNYGPYQHIE--KFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 240
Query: 255 MEGENTGPVN-IGNPGEFTMLELAETVKELIN-PGIEIKMVENTPDDPRQRKPDISKAKE 312
+ G IG GE E+ E + E ++ P V + + D +K +E
Sbjct: 241 LTKGRIGETYLIGADGEKNNKEVLELILEKMSQPKNAYDHVTDRAGHDLRYAIDSTKLRE 300
Query: 313 LLGWEPK-VKLRDGL 326
LGW+P+ +GL
Sbjct: 301 ELGWKPQFTNFEEGL 315
>TAIR|locus:2200018 [details] [associations]
symbol:AXS2 "UDP-D-apiose/UDP-D-xylose synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=ISS]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:CP002684 GO:GO:0005829 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0048046 GO:GO:0044237
EMBL:AC011438 EMBL:BT001220 IPI:IPI00543705 PIR:C86216
RefSeq:NP_563807.1 UniGene:At.20110 ProteinModelPortal:Q9SGE0
SMR:Q9SGE0 STRING:Q9SGE0 PRIDE:Q9SGE0 ProMEX:Q9SGE0
EnsemblPlants:AT1G08200.1 GeneID:837341 KEGG:ath:AT1G08200
TAIR:At1g08200 InParanoid:Q9SGE0 KO:K12449 OMA:RAFTDID
PhylomeDB:Q9SGE0 ProtClustDB:PLN02427 Genevestigator:Q9SGE0
Uniprot:Q9SGE0
Length = 389
Score = 155 (59.6 bits), Expect = 8.4e-20, Sum P(2) = 8.4e-20
Identities = 50/147 (34%), Positives = 68/147 (46%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK----KWIGHPRFELI-- 83
M I + G GFIGSHL +KLM ++V+ D Y K L+ +W G +F I
Sbjct: 18 MTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVQWAGRIQFHRINI 77
Query: 84 RHDVT-EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 142
+HD E L+ D +LA +P Y P+ TI +N I L ++ R++
Sbjct: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
Query: 143 STSEVYGD------PLIHP---QPETY 160
ST EVYG P HP PE Y
Sbjct: 138 STCEVYGKTIGSFLPKDHPLRQDPEFY 164
Score = 147 (56.8 bits), Expect = 8.4e-20, Sum P(2) = 8.4e-20
Identities = 42/127 (33%), Positives = 69/127 (54%)
Query: 170 RSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMN----ID---DG--RVVSNFI 220
R Y K++ E L++ ++G++ I R FN GPRM+ ID +G RV++ F
Sbjct: 182 RWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
Query: 221 AQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGEN--TGPV-NIGNPG-EFTMLEL 276
LR EPL + G R+F Y+ D ++ ++ ++E G + N+GNP E T+ +L
Sbjct: 242 NNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQL 301
Query: 277 AETVKEL 283
AE + E+
Sbjct: 302 AEMMTEV 308
Score = 80 (33.2 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 28/88 (31%), Positives = 40/88 (45%)
Query: 251 LIRLMEGENTGPVNIGNPG-EFTMLELAETVKELI----------NPGIEIKMVE---NT 296
+I E N N+GNP E T+ +LAE + E+ +P I++ E
Sbjct: 275 MIENPERANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEG 334
Query: 297 PDDPRQRKPDISKAKELLGWEPKVKLRD 324
DD +R PD++ LGW PK L D
Sbjct: 335 YDDSDKRIPDMTIINRQLGWNPKTSLWD 362
>UNIPROTKB|C9J3T9 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00915766 ProteinModelPortal:C9J3T9 SMR:C9J3T9 STRING:C9J3T9
Ensembl:ENST00000436241 ArrayExpress:C9J3T9 Bgee:C9J3T9
Uniprot:C9J3T9
Length = 52
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 42/51 (82%), Positives = 46/51 (90%)
Query: 112 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWG 162
YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWG 52
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 218 (81.8 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 73/239 (30%), Positives = 112/239 (46%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADN----YFTGSK-DNLKKWIGHPRFELIRHD 86
ILVTG AGFIG HL +L++ + V+ DN Y K D L++ G F +R
Sbjct: 4 ILVTGAAGFIGFHLTKRLLDRG-DRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRTS 62
Query: 87 VTE-PLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 139
+ + P L ++ D + +LA A + NP + +N++G +N+L + G +
Sbjct: 63 LADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHGVKH 122
Query: 140 LL-TSTSEVYGDPLIHPQPETYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIQIRI 197
L+ S+S VYG P + NV+ P+ S Y K+ E + Y +G+
Sbjct: 123 LVYASSSSVYGANTA--MPFSIHHNVDHPV---SLYAATKKANELMAHTYSSLYGLPTTG 177
Query: 198 ARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
R F YGP D + F L G P+ V G R F YV D+V+G+ R+M+
Sbjct: 178 LRFFTVYGPWGRPDMALFL--FTKAILEGRPIDVYNFGKMQRDFTYVDDIVEGVTRVMD 234
Score = 54 (24.1 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 15/76 (19%), Positives = 31/76 (40%)
Query: 264 NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLR 323
NIGN +L E +++ + + ++ D D+ +G++P +
Sbjct: 261 NIGNNNPVELLAFIEAIEQNLGITAQKNLLPLQAGDVPATYADVDDLMNDVGFKPATPIG 320
Query: 324 DGLPLMEEDFRSRLGV 339
+G+ E +R GV
Sbjct: 321 EGIERFVEWYRGYYGV 336
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 234 (87.4 bits), Expect = 8.2e-19, P = 8.2e-19
Identities = 88/325 (27%), Positives = 141/325 (43%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLL 92
LVTGGAGFIG + V + + V + + G+ + L G+ ++ D+ + L
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGAL 64
Query: 93 I-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK----------RV 135
+ + D + + A + P I+TNV+GTL +L + R
Sbjct: 65 VTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRD 124
Query: 136 GARILLTSTSEVYGDPLIHPQPET-YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQ 194
R L ST EVYG ET + P S Y K ++ L+ +H +G+
Sbjct: 125 AFRFLHVSTDEVYGT-----LGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLP 179
Query: 195 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRL 254
+ N YGP + + +++ IA+AL GEPL V G Q R + +VSD + + +
Sbjct: 180 VLTTNCSNNYGP-YHFPE-KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTV 237
Query: 255 MEGENTGPV-NIGNPGEFTMLELAETVKELIN---P---G----IEIKMVENTPDDPRQR 303
+ G N+G E +E+ + + L++ P G +I V + P R+
Sbjct: 238 LAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRY 297
Query: 304 KPDISKAKELLGWEPKVKLRDGLPL 328
D SK K+ LGWEP G+ L
Sbjct: 298 AIDASKLKDELGWEPAYTFEQGIAL 322
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 227 (85.0 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 90/314 (28%), Positives = 150/314 (47%)
Query: 32 ILVTGGAGFIGSHLVDKL-MENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDV-TE 89
ILVTGGAG+IGSH+V +L ++NEK V+V DN G K + R +LI D E
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEK--VLVVDNLSKGHKKAVDT-----RAKLIVGDFGDE 54
Query: 90 PLLIEVDQIY------HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLT 142
LL+E+ + Y H+A + P K + N+ TL++L + + + ++ +
Sbjct: 55 NLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMVFS 114
Query: 143 STSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
ST+ VYG+P P E + P + Y K V E + Y + HG R FN
Sbjct: 115 STAAVYGEPEKWPITEDF-----PQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFN 169
Query: 203 TYG--PRMNI-DDGRVVSNFIA---QALRGEP--LTV-----QKP-GTQTRSFCYVSDMV 248
G P +I +D ++ I + + GE LTV P GT R + +V+D+
Sbjct: 170 AAGADPSGDIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDLA 229
Query: 249 DG-LIRL--MEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKP 305
+ ++ L + + +G N+GN F++ E+ + +E+ ++++ + P DP
Sbjct: 230 EAHILALNKLNKDESGVYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQRRPGDPAVLVA 289
Query: 306 DISKAKELLGWEPK 319
K ++ L + PK
Sbjct: 290 SSEKIQKELNFTPK 303
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 203 (76.5 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 70/240 (29%), Positives = 111/240 (46%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADN----YFTGSKDNLKKWIGHPRFELIRH 85
M+ LVTG AGFIGS +V++L ++V+ DN Y K I H F I+
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCA-AGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKM 59
Query: 86 DVTEP-LLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGA 137
D+ + ++ E+ D++ HLA A + NP+ +N+IG LN+L G
Sbjct: 60 DIADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVK 119
Query: 138 RILLTSTSEVYGDPLIHPQPETYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
++ S+S VYG L + P + V+ P+ S Y K+ E + Y + I
Sbjct: 120 HLIYASSSSVYG--LNNKVPFSTKDTVDHPV---SLYAATKKSNELMAHSYSHLYNIPTT 174
Query: 197 IARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
R F YG D + F + L G+ + + G R F +V D+V+G+IR+ +
Sbjct: 175 GLRFFTVYGSWGRPDMAPYI--FTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIAD 232
Score = 59 (25.8 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 259 NTGPVNIGNPGEFTMLELAETVKELINP-GIEIK--MVENTPDDPRQRKPDISKAKELLG 315
++ P ++ N G + + L + VK + + GIE K E P D Q D +
Sbjct: 251 SSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGDVYQTYADTQDLFKATN 310
Query: 316 WEPKVKLRDGL 326
+ PK+ +++G+
Sbjct: 311 YVPKISVKEGV 321
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 203 (76.5 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 70/240 (29%), Positives = 111/240 (46%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADN----YFTGSKDNLKKWIGHPRFELIRH 85
M+ LVTG AGFIGS +V++L ++V+ DN Y K I H F I+
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCA-AGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKM 59
Query: 86 DVTEP-LLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGA 137
D+ + ++ E+ D++ HLA A + NP+ +N+IG LN+L G
Sbjct: 60 DIADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVK 119
Query: 138 RILLTSTSEVYGDPLIHPQPETYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
++ S+S VYG L + P + V+ P+ S Y K+ E + Y + I
Sbjct: 120 HLIYASSSSVYG--LNNKVPFSTKDTVDHPV---SLYAATKKSNELMAHSYSHLYNIPTT 174
Query: 197 IARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
R F YG D + F + L G+ + + G R F +V D+V+G+IR+ +
Sbjct: 175 GLRFFTVYGSWGRPDMAPYI--FTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIAD 232
Score = 59 (25.8 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 259 NTGPVNIGNPGEFTMLELAETVKELINP-GIEIK--MVENTPDDPRQRKPDISKAKELLG 315
++ P ++ N G + + L + VK + + GIE K E P D Q D +
Sbjct: 251 SSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGDVYQTYADTQDLFKATN 310
Query: 316 WEPKVKLRDGL 326
+ PK+ +++G+
Sbjct: 311 YVPKISVKEGV 321
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 209 (78.6 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 73/270 (27%), Positives = 122/270 (45%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
MRILVTGGAGFIGS LV L+E ++ V+ D + ++L + R+ ++ D+
Sbjct: 1 MRILVTGGAGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADNERYHFVQADIC 60
Query: 89 EPLLIEV-------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR----VG- 136
+ +E D + HLA + P + I+TN++GT +L + +G
Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQ 120
Query: 137 ARILLTSTSEVYGDPLIHPQPET-YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQI 195
A+ + D + ET + + S Y K A+ L+ +HR + + I
Sbjct: 121 AQQRRFRLHHISTDEVFGSLTETGLFSETSAYDPSSPYSASKASADHLVRAWHRTYALPI 180
Query: 196 RIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
I N YGP + +++ ++ AL+ +PL + G Q R + YV D V L +
Sbjct: 181 VITNCSNNYGPFQYPE--KLIPLMVSNALQSKPLPIYGNGQQVRDWLYVDDHVKALYLVA 238
Query: 256 -EGENTGPVNIGNPGEFTMLELAETVKELI 284
+G+ NIG E T L + + L+
Sbjct: 239 TQGQLGQTYNIGGSCEQTNLTVVRHICSLL 268
Score = 50 (22.7 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 290 IKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 326
I+ V + P + D SK + LGW P+ GL
Sbjct: 290 IQYVVDRPGHDVRYAIDASKIQRELGWRPQESFESGL 326
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 221 (82.9 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 89/323 (27%), Positives = 144/323 (44%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKN-EVIVAD--NYFTGSKD--NLKKWIGHPRFELIRH 85
RI+V+GGAGFIG H + +++ N D NY + + + NLK + FE +
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSF---SNFEFVHL 64
Query: 86 DVTEPL--LIEVDQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 139
D+++ L L+++ + I + A +S +PV K N++ T N+L R+ I
Sbjct: 65 DLSDNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPSI 123
Query: 140 ---LLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
L ST EVYGD E +NP Y K + ++ Y + + I
Sbjct: 124 GYFLHISTDEVYGDVYEGDNKEN--AVMNPTNP---YSASKAAIDLIIKSYQYSYKLPIT 178
Query: 197 IARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL--IRL 254
I R N YGP + +++ I +P+ V GT R + YV D+V + + +
Sbjct: 179 ILRPNNVYGPLQYPE--KIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWI 236
Query: 255 MEGENT-GPV-NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKE 312
T + NIG E L L + + E+ G EI+ +++ + D +K
Sbjct: 237 KNPMTTVNQIYNIGGTDELDNLSLIKLIMEIFGRG-EIQFIKDRNYNDTNYSIDTTKIHN 295
Query: 313 LLGWEPKVKLRDGLPLMEEDFRS 335
L GW PK+ L GL L ++ S
Sbjct: 296 L-GWSPKISLVQGLQLCKQSLDS 317
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 221 (82.9 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 89/323 (27%), Positives = 144/323 (44%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKN-EVIVAD--NYFTGSKD--NLKKWIGHPRFELIRH 85
RI+V+GGAGFIG H + +++ N D NY + + + NLK + FE +
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSF---SNFEFVHL 64
Query: 86 DVTEPL--LIEVDQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 139
D+++ L L+++ + I + A +S +PV K N++ T N+L R+ I
Sbjct: 65 DLSDNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPSI 123
Query: 140 ---LLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
L ST EVYGD E +NP Y K + ++ Y + + I
Sbjct: 124 GYFLHISTDEVYGDVYEGDNKEN--AVMNPTNP---YSASKAAIDLIIKSYQYSYKLPIT 178
Query: 197 IARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL--IRL 254
I R N YGP + +++ I +P+ V GT R + YV D+V + + +
Sbjct: 179 ILRPNNVYGPLQYPE--KIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWI 236
Query: 255 MEGENT-GPV-NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKE 312
T + NIG E L L + + E+ G EI+ +++ + D +K
Sbjct: 237 KNPMTTVNQIYNIGGTDELDNLSLIKLIMEIFGRG-EIQFIKDRNYNDTNYSIDTTKIHN 295
Query: 313 LLGWEPKVKLRDGLPLMEEDFRS 335
L GW PK+ L GL L ++ S
Sbjct: 296 L-GWSPKISLVQGLQLCKQSLDS 317
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 153 (58.9 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 55/209 (26%), Positives = 90/209 (43%)
Query: 133 KRVGARILLTSTSEVYGDPLIHPQP----ETY--WGNVNPIGVRSCYDEGKRVAETLMFD 186
K+ R ST EVYGD L HP ET + S Y K ++ L+
Sbjct: 122 KKKNFRFHHISTDEVYGD-LPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 187 YHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSD 246
+ R +G+ ++ N YGP + + +++ I AL G+ L + G Q R + YV D
Sbjct: 181 WKRTYGLPTIVSNCSNNYGP-YHFPE-KLIPLVILNALEGKALPIYGKGDQIRDWLYVED 238
Query: 247 MVDGLIRLM-EGENTGPVNIGNPGEFTMLELAETVKELINPGI--------EIKMVENTP 297
L ++ EG+ NIG E +++ T+ +L++ + +I V + P
Sbjct: 239 HARALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRP 298
Query: 298 DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
R+ D K LGW+P+ G+
Sbjct: 299 GHDRRYAIDADKISRELGWKPQETFESGI 327
Score = 122 (48.0 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
M+ILVTGGAGFIGS +V ++ N ++ V+ D + G+ ++L + R+ D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEISDSERYSFENADIC 60
Query: 89 EP----LLI---EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 133
+ L ++D + HLA + P I+TN++GT +L A+
Sbjct: 61 DAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>TAIR|locus:2827733 [details] [associations]
symbol:AT2G28755 "AT2G28755" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016040 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AC005727 GO:GO:0016829 IPI:IPI00528391
RefSeq:NP_180442.1 UniGene:At.52956 ProteinModelPortal:Q8S8L8
SMR:Q8S8L8 EnsemblPlants:AT2G28755.1 GeneID:817425
KEGG:ath:AT2G28755 TAIR:At2g28755 Genevestigator:Q8S8L8
Uniprot:Q8S8L8
Length = 56
Score = 210 (79.0 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 38/55 (69%), Positives = 48/55 (87%)
Query: 248 VDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQ 302
++GL RLM G+ +GP+NIGNPGEF+++ELAETVK LI P +EIK+VEN PDDPRQ
Sbjct: 1 MEGLKRLMAGDKSGPINIGNPGEFSIVELAETVKALIKPDVEIKIVENIPDDPRQ 55
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 223 (83.6 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 86/323 (26%), Positives = 139/323 (43%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLL 92
LVTG AGFIG + V + + V + + G+ + L G+ ++ D+ + L
Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGAL 64
Query: 93 I-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK----------RV 135
+ + D + + A + P I+TNV+GTL +L + R
Sbjct: 65 VTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRD 124
Query: 136 GARILLTSTSEVYGDPLIHPQPET-YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQ 194
R L ST EVYG ET + P S Y K ++ L+ +H +G+
Sbjct: 125 AFRFLHVSTDEVYGT-----LGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLP 179
Query: 195 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRL 254
+ N YGP + + +++ IA+AL GEPL V G Q R + +VSD + + +
Sbjct: 180 VLTTNCSNNYGP-YHFPE-KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTV 237
Query: 255 MEGENTGPV-NIGNPGEFTMLELAETVKELIN---P---G----IEIKMVENTPDDPRQR 303
+ G N+G E +E+ + + L++ P G +I V + P R+
Sbjct: 238 LAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRY 297
Query: 304 KPDISKAKELLGWEPKVKLRDGL 326
D SK K+ LGWEP G+
Sbjct: 298 AIDASKLKDELGWEPAYTFEQGI 320
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 146 (56.5 bits), Expect = 9.1e-17, Sum P(2) = 9.1e-17
Identities = 51/199 (25%), Positives = 84/199 (42%)
Query: 143 STSEVYGDPLIHPQPET------YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
ST EVYGD L HP + S Y K ++ L+ + R +G+
Sbjct: 132 STDEVYGD-LPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTI 190
Query: 197 IARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM- 255
+ N YGP + + +++ I AL G+ L + G Q R + YV D L ++
Sbjct: 191 VTNCSNNYGP-YHFPE-KLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVT 248
Query: 256 EGENTGPVNIGNPGEFTMLELAETVKELINPGI--------EIKMVENTPDDPRQRKPDI 307
EG+ NIG E +++ T+ +L++ + +I V + P R+ D
Sbjct: 249 EGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDA 308
Query: 308 SKAKELLGWEPKVKLRDGL 326
K LGW+P+ G+
Sbjct: 309 EKIGRALGWKPQETFESGI 327
Score = 127 (49.8 bits), Expect = 9.1e-17, Sum P(2) = 9.1e-17
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
M+ILVTGGAGFIGS +V ++ N ++ V+ D + G++++L R+ D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADIC 60
Query: 89 E-PLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 133
+ P + + D + HLA + P I+TN++GT +L A+
Sbjct: 61 DAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 148 (57.2 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 53/209 (25%), Positives = 87/209 (41%)
Query: 133 KRVGARILLTSTSEVYGDPLIHPQPET------YWGNVNPIGVRSCYDEGKRVAETLMFD 186
K+ R ST EVYGD L HP + S Y K ++ L+
Sbjct: 122 KKKSFRFHHISTDEVYGD-LPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 187 YHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSD 246
+ R +G+ + N YGP + + +++ I AL G+ L + G Q R + YV D
Sbjct: 181 WKRTYGLPTIVTNCSNNYGP-YHFPE-KLIPLVILNALEGKALPIYGKGDQIRDWLYVED 238
Query: 247 MVDGLIRLM-EGENTGPVNIGNPGEFTMLELAETVKELINPGI--------EIKMVENTP 297
L ++ EG+ NIG E +++ T+ +L++ + +I V + P
Sbjct: 239 HARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRP 298
Query: 298 DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
R+ D K LGW+P+ G+
Sbjct: 299 GHDRRYAIDADKISRELGWKPQETFESGI 327
Score = 121 (47.7 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 33/112 (29%), Positives = 57/112 (50%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
M+ILVTGGAGFIGS +V ++ N ++ V+ D + G+ ++L R+ D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC 60
Query: 89 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 133
+ + + + D + HLA + P I+TN++GT +L A+
Sbjct: 61 DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 163 (62.4 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 52/194 (26%), Positives = 90/194 (46%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE 89
M+IL++GGAG+IGSH + + ++ + +E+ V DN GSK ++ F+ D+++
Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTD-HEICVLDNLSKGSKIAIEDLQKIRAFKFFEQDLSD 59
Query: 90 ----PLLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 141
L E D I H A NP+K N + T N++ + G + +
Sbjct: 60 FQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFIF 119
Query: 142 TSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG-IQIRIARI 200
+ST+ YG+P ET +P+ + Y K ++E ++ D + + I R
Sbjct: 120 SSTAATYGEPQTPVVSET-----SPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRY 174
Query: 201 FNTYGPRMNIDDGR 214
FN G M+ G+
Sbjct: 175 FNVAGACMDYTLGQ 188
Score = 99 (39.9 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 233 KPGTQTRSFCYVSDMVDGLIRLME--GENTGPV-NIGNPGEFTMLELAETVKELINPGIE 289
K GT R F +V D+ + ++ EN V N+G F++ E+ E +K++ +
Sbjct: 221 KDGTCIRDFIHVDDISSAHLATLDYLQENESNVFNVGYGHGFSVKEVIEAMKKVSGVDFK 280
Query: 290 IKMVENTPDDPRQRKPDISKAKELLGWEPK 319
+++ DP D SK + L W+PK
Sbjct: 281 VELAPRRAGDPSVLISDASKIRNLTSWQPK 310
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 220 (82.5 bits), Expect = 9.3e-16, P = 9.3e-16
Identities = 81/269 (30%), Positives = 123/269 (45%)
Query: 78 PRFELIRHDVTEPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLG 130
PR++L+ D+ I E+D + H A + + ++ NV+ + L
Sbjct: 57 PRYKLVLTDIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLE 116
Query: 131 LAKRVGA--RILLTSTSEVYGDPLI--HPQPETYWGNVNPIGVRSCYDEGKRVAETLMFD 186
+ G R + ST EVYGD + + Q + + + P G + Y K E +
Sbjct: 117 TVRTYGKIKRFVHISTDEVYGDSDLSENEQGKVEFSRLVP-G--NPYAATKIAGEAYVRA 173
Query: 187 YHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQA-LRGEPLTVQKPGTQTRSFCYVS 245
Y Q+ + I AR+ N YGP N D +VV FI A +RGE T+Q G Q RS+ +V
Sbjct: 174 YQTQYNLPIVTARMNNIYGP--NQWDVKVVPRFIEIAKVRGE-YTIQGSGKQLRSWLFVD 230
Query: 246 DMVDGLIRLME-GENTGPVNIGNPGEFTMLELAETVKELINPGI----EIKMVENTPDDP 300
D GL + E GE N+G E + +LA+T++E ++ + E ++ PD P
Sbjct: 231 DASAGLKAVCEKGELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSIPDRP 290
Query: 301 RQRKP---DISKAKELLGWEPKVKLRDGL 326
I KAK LGWEP DG+
Sbjct: 291 YNDLRYLISIEKAKNDLGWEPTTSFDDGM 319
Score = 218 (81.8 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 78/270 (28%), Positives = 128/270 (47%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEK--NEVIVADNYFTGSKDNLKKWIGH-PRFELIRHDVT 88
+++TGG GFIGS+ V+ + + N V + N+ + + + PR++L+ D+
Sbjct: 8 VVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLVLTDIK 67
Query: 89 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RI 139
I E+D + H A + + ++ NV+ + L + G R
Sbjct: 68 NEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKIKRF 127
Query: 140 LLTSTSEVYGDPLI--HPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRI 197
+ ST EVYGD + + Q + + + P G + Y K E + Y Q+ + I
Sbjct: 128 VHISTDEVYGDSDLSENEQGKVEFSRLVP-G--NPYAATKIAGEAYVRAYQTQYNLPIVT 184
Query: 198 ARIFNTYGPRMNIDDGRVVSNFIAQA-LRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
AR+ N YGP N D +VV FI A +RGE T+Q G Q RS+ +V D GL + E
Sbjct: 185 ARMNNIYGP--NQWDVKVVPRFIEIAKVRGE-YTIQGSGKQLRSWLFVDDASAGLKAVCE 241
Query: 257 -GENTGPVNIGNPGEFTMLELAETVKELIN 285
GE N+G E + +LA+T++E ++
Sbjct: 242 KGELHEIYNLGTYYEKNVADLAKTIQEEVD 271
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 214 (80.4 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 73/272 (26%), Positives = 125/272 (45%)
Query: 32 ILVTGGAGFIGSHLVDKLME-NEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 89
+LVTGGAGFIGS+ ++ + N VI D + G+ NL +P + ++ D+ +
Sbjct: 10 VLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQNPAYRFVKGDIGD 69
Query: 90 PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR---VGA-- 137
L+ +D + H A + P ++TNV+GT +L ++R GA
Sbjct: 70 ADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWESGAIE 129
Query: 138 --RILLTSTSEVYGDPLIHPQPET-YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQ 194
R L ST EVYG ET Y+ P+ S Y K ++ L+ Y+ G+
Sbjct: 130 RFRFLHVSTDEVYGT-----LGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLP 184
Query: 195 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRL 254
+ R N YGP + +++ I + G+PL V G R + +V D + +
Sbjct: 185 VLTTRCSNNYGP-FQFPE-KLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTAIETV 242
Query: 255 MEGENTGPV-NIGNPGEFTMLELAETVKELIN 285
++G G V N+G E+ +++ + +L++
Sbjct: 243 LKGGKPGEVFNVGGNNEWFNIDIVHLLCDLLD 274
Score = 185 (70.2 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 69/261 (26%), Positives = 114/261 (43%)
Query: 86 DVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR---VGA--- 137
D+ +L E +D + H A + P ++TNV+GT +L ++R GA
Sbjct: 71 DLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWESGAIER 130
Query: 138 -RILLTSTSEVYGDPLIHPQPET-YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQI 195
R L ST EVYG ET Y+ P+ S Y K ++ L+ Y+ G+ +
Sbjct: 131 FRFLHVSTDEVYGT-----LGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPV 185
Query: 196 RIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
R N YGP + +++ I + G+PL V G R + +V D + ++
Sbjct: 186 LTTRCSNNYGP-FQFPE-KLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTAIETVL 243
Query: 256 EGENTGPV-NIGNPGEFTMLELAETVKELIN-----PGIE----IKMVENTPDDPRQRKP 305
+G G V N+G E+ +++ + +L++ PG E I V++ R+
Sbjct: 244 KGGKPGEVFNVGGNNEWFNIDIVHLLCDLLDERLGRPGGESRGLITFVKDRLGHDRRYAI 303
Query: 306 DISKAKELLGWEPKVKLRDGL 326
+K K LGWEP G+
Sbjct: 304 SAAKIKRELGWEPSYTFERGI 324
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 213 (80.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 71/277 (25%), Positives = 130/277 (46%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRH 85
+ ILVTGGAGFIGS +V +++N ++ V+ D + G+ ++L +PR+ +
Sbjct: 4 EGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQV 63
Query: 86 DVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
D+ + ++ D + HLA + + + I+TN++GT ++L A+ +
Sbjct: 64 DICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQ 123
Query: 139 ILLTSTSEVYGDPLIHPQPETYWGNVN----------PIGVRSCYDEGKRVAETLMFDYH 188
+ + E + H + +G+++ P S Y K A+ L+ +
Sbjct: 124 -MPSEKREAFR--FHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQ 180
Query: 189 RQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMV 248
R + + ++ N YGPR + +++ I AL G+PL V G Q R + +V D
Sbjct: 181 RTYRLPSIVSNCSNNYGPRQFPE--KLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHA 238
Query: 249 DGLIRLM-EGENTGPVNIGNPGEFTMLELAETVKELI 284
L +++ EG NIG E T LE+ +T+ L+
Sbjct: 239 RALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALL 275
Score = 172 (65.6 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 60/207 (28%), Positives = 90/207 (43%)
Query: 133 KRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 192
KR R ST EVYGD +H + + P S Y K A+ L+ + R +
Sbjct: 128 KREAFRFHHISTDEVYGD--LHGTDDLFT-ETTPYAPSSPYSASKAAADHLVRAWQRTYR 184
Query: 193 IQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLI 252
+ ++ N YGPR + +++ I AL G+PL V G Q R + +V D L
Sbjct: 185 LPSIVSNCSNNYGPRQFPE--KLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALY 242
Query: 253 RLM-EGENTGPVNIGNPGEFTMLELAETVKELIN------P-GIE-----IKMVENTPDD 299
+++ EG NIG E T LE+ +T+ L+ P G+ I V++ P
Sbjct: 243 QVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 302
Query: 300 PRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D +K + LGW P GL
Sbjct: 303 DARYAVDAAKIRRDLGWLPLETFESGL 329
>UNIPROTKB|Q83AP4 [details] [associations]
symbol:CBU_1837 "UDP-glucose 4-epimerase" species:227377
"Coxiella burnetii RSA 493" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 GO:GO:0003978
HOGENOM:HOG000168002 RefSeq:NP_820816.2 ProteinModelPortal:Q83AP4
PRIDE:Q83AP4 GeneID:1209749 KEGG:cbu:CBU_1837 PATRIC:17932405
OMA:RMRFDIV ProtClustDB:CLSK915066
BioCyc:CBUR227377:GJ7S-1811-MONOMER Uniprot:Q83AP4
Length = 346
Score = 213 (80.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 88/316 (27%), Positives = 141/316 (44%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT--E 89
+LVTG G+IGS LV KL+ N+ V D ++ GS D L + HP ELI DV +
Sbjct: 6 VLVTGAGGYIGSVLVPKLL-NKGYHVKAVDRFYFGS-DKLSQ---HPHLELINEDVRRLQ 60
Query: 90 P-LLIEVDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 143
P L VD + LA P+ IF K T + N + LAK+ R +L S
Sbjct: 61 PSLFTNVDYVIDLAAVSNDPSGDIFEK----ATWEINHQARVQSATLAKQQKVKRYILPS 116
Query: 144 TSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNT 203
+ +YG ET NP+ + +E K E L +R A ++
Sbjct: 117 SCSIYGFQK-GAVDET--AKTNPLTTYAKANE-KAEKEILPLATDDFTVTVMRQATVYG- 171
Query: 204 YGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGE----N 259
Y PRM D ++ + A + + + + GTQ R +V D D ++ L++ + N
Sbjct: 172 YSPRMRFD--LAINGMVYGAWEDKCIPLMRDGTQYRPMVHVQDTTDVMVLLLQADASEIN 229
Query: 260 TGPVNIG-NPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDIS--KAKELLGW 316
+N+G + + L + + E++ ++ K+ DP R +S K K +L W
Sbjct: 230 GQIINVGCEEQNYQLQPLGQLIAEVVGQKLDEKIAIEWYGDPDHRSYYVSFDKIKRILNW 289
Query: 317 EPKVKLRDG-LPLMEE 331
+P+ G + L+E+
Sbjct: 290 QPQWDAAKGAVELIEK 305
>TIGR_CMR|CBU_1837 [details] [associations]
symbol:CBU_1837 "NAD-dependent epimerase/dehydratase
family protein, putative" species:227377 "Coxiella burnetii RSA
493" [GO:0008150 "biological_process" evidence=ND] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0044237
GO:GO:0003978 HOGENOM:HOG000168002 RefSeq:NP_820816.2
ProteinModelPortal:Q83AP4 PRIDE:Q83AP4 GeneID:1209749
KEGG:cbu:CBU_1837 PATRIC:17932405 OMA:RMRFDIV
ProtClustDB:CLSK915066 BioCyc:CBUR227377:GJ7S-1811-MONOMER
Uniprot:Q83AP4
Length = 346
Score = 213 (80.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 88/316 (27%), Positives = 141/316 (44%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT--E 89
+LVTG G+IGS LV KL+ N+ V D ++ GS D L + HP ELI DV +
Sbjct: 6 VLVTGAGGYIGSVLVPKLL-NKGYHVKAVDRFYFGS-DKLSQ---HPHLELINEDVRRLQ 60
Query: 90 P-LLIEVDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 143
P L VD + LA P+ IF K T + N + LAK+ R +L S
Sbjct: 61 PSLFTNVDYVIDLAAVSNDPSGDIFEK----ATWEINHQARVQSATLAKQQKVKRYILPS 116
Query: 144 TSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNT 203
+ +YG ET NP+ + +E K E L +R A ++
Sbjct: 117 SCSIYGFQK-GAVDET--AKTNPLTTYAKANE-KAEKEILPLATDDFTVTVMRQATVYG- 171
Query: 204 YGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGE----N 259
Y PRM D ++ + A + + + + GTQ R +V D D ++ L++ + N
Sbjct: 172 YSPRMRFD--LAINGMVYGAWEDKCIPLMRDGTQYRPMVHVQDTTDVMVLLLQADASEIN 229
Query: 260 TGPVNIG-NPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDIS--KAKELLGW 316
+N+G + + L + + E++ ++ K+ DP R +S K K +L W
Sbjct: 230 GQIINVGCEEQNYQLQPLGQLIAEVVGQKLDEKIAIEWYGDPDHRSYYVSFDKIKRILNW 289
Query: 317 EPKVKLRDG-LPLMEE 331
+P+ G + L+E+
Sbjct: 290 QPQWDAAKGAVELIEK 305
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 209 (78.6 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 82/330 (24%), Positives = 152/330 (46%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKN--------EVIVADNYFTGSKDNLKKWIGHPRFE 81
M++ +TG G +GSHL + L+ + + +D F G++ ++ W ++
Sbjct: 1 MKVWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQFNGAEVDITDWCSV--YD 58
Query: 82 LIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARI 139
I P D ++HLA + P PV+T+ TN++GT + +RV A+I
Sbjct: 59 SIA--TFRP-----DAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAKI 111
Query: 140 LLTSTSEVYG--DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRI 197
++ +S YG DP P E + P+ Y K + L + YH+ +G+ +
Sbjct: 112 IVAGSSAEYGFVDPSEVPINERR--ELRPLHP---YGVSKAATDMLAYQYHKSYGMHTVV 166
Query: 198 ARIFNTYGPRMNIDDGRVVSNFIAQA--LRGEP--LTVQKPGTQT-RSFCYVSDMVDGLI 252
ARIFN GPR + D +S+F+ + L P ++ +T R+ V D+ L+
Sbjct: 167 ARIFNCTGPR-KVGDA--LSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALM 223
Query: 253 RLME-GENTGPVNIGNPGEFTMLELAETV-----KELINPGIEIKMVENTPDDPRQRKPD 306
+++ GE N+G + M ++ + V ++ I P ++ ++ P D + D
Sbjct: 224 LMLDKGEAGADYNVGGSIAYEMGDVLKQVIAACKRDDIVPEVDPALLR--PTDEKIIYGD 281
Query: 307 ISKAKELLGWEPKVKLRDGLPLMEEDFRSR 336
SK + GW+ ++ L + M + +RS+
Sbjct: 282 CSKLAAITGWQQEICLTQTIADMFDYWRSK 311
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 141 (54.7 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 46/170 (27%), Positives = 75/170 (44%)
Query: 166 PIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 225
P S Y K ++ L+ + R +G + N YGP + + +++ I AL
Sbjct: 178 PYTPSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGP-YHFPE-KLIPLVILNALE 235
Query: 226 GEPLTVQKPGTQTRSFCYVSDMVDGLIRLM-EGENTGPVNIGNPGEFTMLELAETVKELI 284
G+PL + G Q R + YV D L +++ EG+ NIG E LE+ +T+ ++
Sbjct: 236 GKPLPIYGKGDQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNEKRNLEVVQTICSIL 295
Query: 285 N-------PGIE-IKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ P E I V + P R+ D +K L W+P+ GL
Sbjct: 296 DSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETFETGL 345
Score = 120 (47.3 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 34/112 (30%), Positives = 57/112 (50%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
M+ILVTGGAGFIGS +V ++ N ++ V+ D + G+ ++L PR+ + D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLTYAGNLESLTSVADSPRYTFEKVDIC 60
Query: 89 EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 133
+ +E D + HLA + I+TN++GT +L A+
Sbjct: 61 DRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAAR 112
Score = 60 (26.2 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 25/74 (33%), Positives = 33/74 (44%)
Query: 92 LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK---------RVGA-RILL 141
L + D + HLA + I+TN++GT +L A+ R A R
Sbjct: 71 LHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAARHYWMQLNTERKSAFRFHH 130
Query: 142 TSTSEVYGDPLIHP 155
ST EVYGD L HP
Sbjct: 131 ISTDEVYGD-LPHP 143
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 210 (79.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 89/313 (28%), Positives = 143/313 (45%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDV--T 88
RILVTGGAG++GS LV +L+E V V D F G D L K +P ++ D+ T
Sbjct: 7 RILVTGGAGYVGSALVPQLLELGYR-VTVYDTLFFGD-DFLPK--ENPYLNIVEGDIRDT 62
Query: 89 EPL---LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 144
E L + D + LAC ++ ++ + + N+ M+ AK G R + S+
Sbjct: 63 ERLKQCFKDADAVISLACISNDASFELDETLSTSINLEAFEPMVKAAKAAGVKRFIYASS 122
Query: 145 SEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI--QIRIARIFN 202
S VYG E + P+ + Y++ K + E L+F + + IR A +
Sbjct: 123 SSVYGVSETKDVTEEH-----PLVPLTLYNKYKGMCEPLLFKHQSPEFVCVTIRPATLCG 177
Query: 203 TYGPRMNID-DGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVD--GLIRLMEGEN 259
Y PR +D +++N A+ +TV G+Q R +V DM D L+ ++ E
Sbjct: 178 -YAPRQRLDLSVNILTN---HAVNNNKITVFG-GSQLRPNLHVQDMCDLYKLLLVVPDEK 232
Query: 260 -TGPV-NIGNPGEFTMLELAETVKELINPGIE----IKMVENTPDDPRQRKPDISKAKEL 313
G N+G + +++E+A VK ++ I +V DD R + K K
Sbjct: 233 IAGETFNVGYENK-SIMEIAHIVKNIVEEEFPEKAPIDIVTAPTDDIRSYHINSDKIKRC 291
Query: 314 LGWEPKVKLRDGL 326
LG+E K + D +
Sbjct: 292 LGFEAKYSIEDAV 304
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 147 (56.8 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 55/204 (26%), Positives = 95/204 (46%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK--KWIGHPRFELIRHDV 87
M IL+TGGAG+IGSH +L+ N ++IV DN S ++L K I +FE + +V
Sbjct: 1 MAILITGGAGYIGSHTCVELLNNNY-KIIVVDNLSNSSIESLNRVKEITGKQFEFYKENV 59
Query: 88 TE-----PLLIE--VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 133
+ +E ++ + H A +P+ Y YN N+I + + + +
Sbjct: 60 LNREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYN-------NIISAIVLCDVMQ 112
Query: 134 RVGAR-ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 192
+ + + +S++ VYG P P E + P+ V + Y + K + E +M D +
Sbjct: 113 KHNVKNFIFSSSATVYGIPKTLPITEEF-----PLSVTNPYGQTKLMIEQIMRDVAKADD 167
Query: 193 I-QIRIARIFNTYGPRMNIDDGRV 215
I + R FN +G + GR+
Sbjct: 168 EWSIALLRYFNPFGAHQS---GRI 188
Score = 107 (42.7 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 27/96 (28%), Positives = 48/96 (50%)
Query: 233 KPGTQTRSFCYVSDMVDGLIRLMEG--ENTG--PVNIGNPGEFTMLELAETVKELINPGI 288
K GT R + +V D+ G ++ +E + G N+G +++LE+ + +++ I
Sbjct: 224 KDGTGVRDYIHVVDLAKGHVKALEKVLKTKGIEAYNLGTGKGYSVLEMVKAFEKVSGKKI 283
Query: 289 EIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRD 324
K++ P D D+SKAK LGWE + L +
Sbjct: 284 PYKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEE 319
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 205 (77.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 69/251 (27%), Positives = 117/251 (46%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVAD---NYFTGS--KDNLKKWIGHPRFELIR 84
M+ILVTG AGFIGS + +L++ E + V D Y+ +D + F L R
Sbjct: 1 MKILVTGAAGFIGSEMALRLLK-EGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLER 59
Query: 85 HDVTEPLLIEV-------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 137
+ + +E + + H A A + +P I N++G+ N++ L++R G
Sbjct: 60 IRIEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGT 119
Query: 138 R-ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
+ +++ STS YG P E + P + + Y K +E + + +G+
Sbjct: 120 QHLVMASTSSAYGANQKFPFEER---DSAPYPL-TIYAATKLASELIAHSHAHLYGVPTT 175
Query: 197 IARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
+ R F+ YGP D + F + +G+P+ V G R F Y+ D+V+ + RLM+
Sbjct: 176 VLRFFSVYGPWGRPDMAFFL--FTDKIFKGQPIDVFNHGDLLRDFTYIDDLVEAIRRLMD 233
Query: 257 GENTGPVNIGN 267
T PV +GN
Sbjct: 234 ---TPPV-VGN 240
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 56/257 (21%), Positives = 104/257 (40%)
Query: 96 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLIH 154
+ + H A A + +P I N++G+ N++ L++R G + +++ STS YG
Sbjct: 78 EMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQHLVMASTSSAYGANQKF 137
Query: 155 PQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP--RMN--- 209
P E + P + + Y K +E + + +G+ + R F+ YGP R +
Sbjct: 138 PFEER---DSAPYPL-TIYAATKLASELIAHSHAHLYGVPTTVLRFFSVYGPWGRPDMAF 193
Query: 210 ------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPV 263
I G+ + F L + + R +V ++ G++ PV
Sbjct: 194 FLFTDKIFKGQPIDVFNHGDLLRDFTYIDDLVEAIRRLMDTPPVVGN--HIIRGDSLSPV 251
Query: 264 ------NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWE 317
NIGN +++ E ++ I E M++ P D +Q D+ L G+
Sbjct: 252 APYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNMIDMQPGDVKQTFADVRLLDALTGYT 311
Query: 318 PKVKLRDGLPLMEEDFR 334
P R G+ + +R
Sbjct: 312 PDTDYRTGIARFVDWYR 328
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 208 (78.3 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 83/331 (25%), Positives = 149/331 (45%)
Query: 28 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKK----WIGHPRFELI 83
+ + +LVTG AGF+G+H V ++ + VI DN+ +LK+ + ++
Sbjct: 95 NGITVLVTGAAGFVGTH-VSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIV 153
Query: 84 RHDVTE-PLL------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 136
D+ + LL + + HLA A + NP + +N+ G +N+L + K V
Sbjct: 154 EGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVN 213
Query: 137 AR--ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQ 194
+ I+ S+S VYG P E + P S Y K+ E + Y+ +G+
Sbjct: 214 PQPAIVWASSSSVYGLNTKVPFSEKDKTD-QPA---SLYAATKKAGEEIAHTYNHIYGLS 269
Query: 195 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKP---GTQTRSFCYVSDMVDGL 251
+ R F YGP D F L+G+ +++ + GT R F Y+ D+V G
Sbjct: 270 LTGLRFFTVYGPWGRPDMAYFF--FTKDILKGKSISIFESANHGTVARDFTYIDDIVKGC 327
Query: 252 IRLME---------GENTGP--VNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDP 300
+ ++ G+ GP + + N G + + +++ V+ ++ +++K +N P
Sbjct: 328 LAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVR-ILERQLKVKAKKNLIKMP 386
Query: 301 RQRK-P----DISKAKELLGWEPKVKLRDGL 326
R P +IS A+ LG++P L+ GL
Sbjct: 387 RNGDVPFTHANISLAQRELGYKPTTDLQTGL 417
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 203 (76.5 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 69/243 (28%), Positives = 107/243 (44%)
Query: 95 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLI 153
VD I H A S +P+ T N+ G L ML AK + + ++S YGD
Sbjct: 95 VDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKSFVYAASSSTYGDHPA 154
Query: 154 HPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDG 213
P+ E G P+ S Y K V E +H+ +G+ R FN +G R + D
Sbjct: 155 LPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTGLRYFNVFGKRQDPDGA 209
Query: 214 --RVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNP--G 269
V+ + + E L + G +R FC+V + V I + G + N G
Sbjct: 210 YAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAATANDAGKNQVYNVALG 269
Query: 270 EFTMLE-LAETVKELINP-GIEIKMVENTPD----DPRQRKPDISKAKELLGWEPKVKLR 323
+ T L L ++K + G++ + D D R + DISKAK L+G+EP+ K++
Sbjct: 270 DRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDVRHSQADISKAKSLIGFEPEFKIQ 329
Query: 324 DGL 326
G+
Sbjct: 330 QGI 332
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 203 (76.5 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 69/243 (28%), Positives = 107/243 (44%)
Query: 95 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLI 153
VD I H A S +P+ T N+ G L ML AK + + ++S YGD
Sbjct: 95 VDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKSFVYAASSSTYGDHPA 154
Query: 154 HPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDG 213
P+ E G P+ S Y K V E +H+ +G+ R FN +G R + D
Sbjct: 155 LPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTGLRYFNVFGKRQDPDGA 209
Query: 214 --RVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNP--G 269
V+ + + E L + G +R FC+V + V I + G + N G
Sbjct: 210 YAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAATANDAGKNQVYNVALG 269
Query: 270 EFTMLE-LAETVKELINP-GIEIKMVENTPD----DPRQRKPDISKAKELLGWEPKVKLR 323
+ T L L ++K + G++ + D D R + DISKAK L+G+EP+ K++
Sbjct: 270 DRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDVRHSQADISKAKSLIGFEPEFKIQ 329
Query: 324 DGL 326
G+
Sbjct: 330 QGI 332
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 200 (75.5 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 88/322 (27%), Positives = 141/322 (43%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE 89
MR L+TG AGF+G +L + L E + EV F S++N K P E+I D+ +
Sbjct: 1 MRALITGVAGFVGKYLANHLTE-QNVEV------FGTSRNNEAKL---PNVEMISLDIMD 50
Query: 90 PLL-------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK--RVGARIL 140
I+ D I+HLA +S N T TNV GTL++L + + RIL
Sbjct: 51 SQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRIL 110
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
+SE YG +I P+ E+ N + S Y K L Y + +G+ I R
Sbjct: 111 TIGSSEEYG--MILPE-ESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRT 167
Query: 201 FNTYGPRMNIDDGRVVSNFIAQAL-----RGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
FN GP ++ G V +F Q + + EP+ R F V D+V L
Sbjct: 168 FNHIGPGQSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLS 225
Query: 256 EGENTGPV-NIGNPGEFTMLELAETVKELINPGI--EIKMVENTPDDPRQRKPDISKAKE 312
+ TG V N+ + + ++ + + + N I E+ ++ P + + K+
Sbjct: 226 QYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKD 285
Query: 313 LLGWEPKVKLRDGLPLMEEDFR 334
GW+P++ L L + + +R
Sbjct: 286 STGWKPRIPLEKSLFEILQSYR 307
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 201 (75.8 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 69/273 (25%), Positives = 128/273 (46%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 89
+ILVTGGAGFIGS +V ++ N ++ V+ D + G+ ++L + +PR+ + D+ +
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICD 62
Query: 90 PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 142
++ D + HLA + + + I+TN++GT N+L A+ + + +
Sbjct: 63 RAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQ-MPS 121
Query: 143 STSEVYGDPLIHPQPETYWGNVN----------PIGVRSCYDEGKRVAETLMFDYHRQHG 192
E + H + +G++ P S Y K ++ L+ + R +G
Sbjct: 122 EQHEAFR--FHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 193 IQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLI 252
+ + N YGP + + +++ I AL G+PL V G Q R + +V D L
Sbjct: 180 LPTIVTNCSNNYGP-YHFPE-KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALY 237
Query: 253 RLM-EGENTGPVNIGNPGEFTMLELAETVKELI 284
+++ EG NIG E +E+ +T+ L+
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALL 270
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/197 (26%), Positives = 84/197 (42%)
Query: 143 STSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
ST EVYGD + + P S Y K ++ L+ + R +G+ + N
Sbjct: 133 STDEVYGDL---GGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSN 189
Query: 203 TYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM-EGENTG 261
YGP + + +++ I AL G+PL V G Q R + +V D L +++ EG
Sbjct: 190 NYGP-YHFPE-KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGE 247
Query: 262 PVNIGNPGEFTMLELAETVKELIN------P-GIE-----IKMVENTPDDPRQRKPDISK 309
NIG E +E+ +T+ L+ P G+ I V++ P + D +K
Sbjct: 248 TYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYAVDAAK 307
Query: 310 AKELLGWEPKVKLRDGL 326
+ LGW P GL
Sbjct: 308 IRRDLGWLPLETFESGL 324
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 154 (59.3 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 53/157 (33%), Positives = 76/157 (48%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RI+VTGGAG+IGSH V +L+E VIV DN S + +K+ E+ H V
Sbjct: 7 RIMVTGGAGYIGSHTVIELIEAGYTPVIV-DNLSNSSLEAIKRVESITGKEIEFHHVDIM 65
Query: 91 LLIEVDQIYHLACPASPIFY-------KYN--PVKTIKTNVIGTLNMLGLA-KRVGARIL 140
+D+I+ S I + + N P+K N+ GTL +L L K +++
Sbjct: 66 NEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKLV 125
Query: 141 LTSTSEVYGDPLIHPQPETY-WGNVNPIGVRSCYDEG 176
+S++ VYGDP P E + NP G Y EG
Sbjct: 126 FSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEG 162
Score = 82 (33.9 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 25/88 (28%), Positives = 41/88 (46%)
Query: 235 GTQTRSFCYVSDMVDGLIRLMEG---ENTGPV--NIGNPGEFTMLELAETVKELINPGIE 289
GT R F +V D+ G I + + G V N+G +++LE+ +K+ + I
Sbjct: 231 GTGVRDFIHVVDLAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIP 290
Query: 290 IKMVENTPDDPRQRKPDISKAKELLGWE 317
++V D D SKA + LGW+
Sbjct: 291 YQIVSRRKGDVASSFADPSKALKELGWK 318
Score = 41 (19.5 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 18/59 (30%), Positives = 25/59 (42%)
Query: 165 NPIGVRSCY---DEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFI 220
NP+G ++ K + LM Y Q I R I + +G N DG V +FI
Sbjct: 183 NPVGAHPSGLIGEDPKDIPNNLM-PYVTQTAIGKR--PILSIFGNDYNTPDGTGVRDFI 238
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 200 (75.5 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 70/273 (25%), Positives = 128/273 (46%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 89
+ILVTGGAGFIGS +V ++ N ++ V+ D + G+ ++L +PR+ + D+ +
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62
Query: 90 PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 142
++ D + HLA + + + I+TN++GT N+L A R + + +
Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAA-RAYRQQMPS 121
Query: 143 STSEVYGDPLIHPQPETYWGNVN----------PIGVRSCYDEGKRVAETLMFDYHRQHG 192
E + H + +G+++ P S Y K ++ L+ + R +G
Sbjct: 122 EKHEAFR--FHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 193 IQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLI 252
+ + N YGP + + +++ I AL G+PL V G Q R + +V D L
Sbjct: 180 LPTIVTNCSNNYGP-YHFPE-KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALY 237
Query: 253 RLM-EGENTGPVNIGNPGEFTMLELAETVKELI 284
+++ EG NIG E +E+ +T+ L+
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALL 270
Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 53/197 (26%), Positives = 85/197 (43%)
Query: 143 STSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
ST EVYGD + + P S Y K ++ L+ + R +G+ + N
Sbjct: 133 STDEVYGDL---SGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSN 189
Query: 203 TYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM-EGENTG 261
YGP + + +++ I AL G+PL V G Q R + +V D L +++ EG
Sbjct: 190 NYGP-YHFPE-KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGE 247
Query: 262 PVNIGNPGEFTMLELAETVKELIN------P-GIE-----IKMVENTPDDPRQRKPDISK 309
NIG E +E+ +T+ L+ P G+ I V++ P + D +K
Sbjct: 248 TYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAVDTAK 307
Query: 310 AKELLGWEPKVKLRDGL 326
+ LGW+P GL
Sbjct: 308 IRRDLGWQPLETFESGL 324
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 147 (56.8 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 53/189 (28%), Positives = 90/189 (47%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKN-EVIVADNYFTGSKDNLK--KWIGHPRFELIRHD 86
M +L+TGG G+IGSH V +L+++ K E+++ DN S L+ K I + I+ D
Sbjct: 1 MSLLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIKQITNKTVTFIKAD 60
Query: 87 VTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLG-LAKRVGAR 138
V + +E ++ + H A + P+ + NV GT+ +L +AK
Sbjct: 61 VCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQVKN 120
Query: 139 ILLTSTSEVYGDPLIHPQPETYWGNV-NPIGVRSCYDEGKRVAETLMFDYHRQHGI-QIR 196
++ +S++ VYG+ + P ET + NP Y + K + E ++FD + I
Sbjct: 121 LVFSSSATVYGNN-VSPLNETMATSATNP------YGQTKLMVEHVLFDLAKSDASWSIA 173
Query: 197 IARIFNTYG 205
R FN G
Sbjct: 174 CLRYFNPIG 182
Score = 97 (39.2 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 235 GTQTRSFCYVSDMVDGLIRLME--GENTGPV------NIGNPGEFTMLELAETVKELINP 286
GT R + +V D+ G ++ +E G G V N+G ++LE+ T K++
Sbjct: 227 GTGVRDYIHVVDLAQGHVKALESLGHAKGTVKGCQAINLGTGNGTSVLEIVNTFKDISKQ 286
Query: 287 GIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKL 322
I ++V D D S A ELL W+ K+ L
Sbjct: 287 DIPYQVVPRRAGDLATVYADASLANELLDWQAKLDL 322
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 199 (75.1 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 69/271 (25%), Positives = 124/271 (45%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
M ILVTGG+GFIGS L+ ++ + ++ VI D + ++ L++ +PR+ + D+
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLTYAANQSALREVENNPRYVFEKVDIC 61
Query: 89 EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG----- 136
+ +IE D + HLA + ++TN++GT +L +AK
Sbjct: 62 DLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDE 121
Query: 137 ARILLTSTSEVYGDPLIHPQP--ETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQ 194
A+ + D + E + +P S Y K + L+ +HR +G+
Sbjct: 122 AKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTYGLP 181
Query: 195 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDG-LIR 253
+ I N YG + + +++ I+ A+ G+PL + G Q R + +V D V +
Sbjct: 182 VIITNSSNNYGAYQHAE--KLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQASYLV 239
Query: 254 LMEGENTGPVNIGNPGEFTMLELAETVKELI 284
L +G NIG E T LE+ + + +L+
Sbjct: 240 LTKGRVGENYNIGGNCEKTNLEVVKRICQLL 270
Score = 167 (63.8 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 59/208 (28%), Positives = 93/208 (44%)
Query: 132 AKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 191
AK+ R ST EVYGD L +P + +P S Y K + L+ +HR +
Sbjct: 122 AKKTTFRFHHISTDEVYGD-LSLSEPA--FTEQSPYHPSSPYSASKAASNHLVQAWHRTY 178
Query: 192 GIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDG- 250
G+ + I N YG + + +++ I+ A+ G+PL + G Q R + +V D V
Sbjct: 179 GLPVIITNSSNNYGAYQHAE--KLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQAS 236
Query: 251 LIRLMEGENTGPVNIGNPGEFTMLELAETVKELIN---PGI--EIK-------MVENTPD 298
+ L +G NIG E T LE+ + + +L+ P IK V++ P
Sbjct: 237 YLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFVKDRPG 296
Query: 299 DPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D SK LGW+P++ GL
Sbjct: 297 HDVRYSLDCSKIHAELGWQPQITFEQGL 324
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 190 (71.9 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 67/241 (27%), Positives = 107/241 (44%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADN----YFTGSKD-NLKKWIGHPRFELIR 84
MR LVTG AGFIG HL +L+ + ++ DN Y K+ L + P F +
Sbjct: 6 MRTLVTGCAGFIGFHLTKRLLARG-DHILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHK 64
Query: 85 HDVTEPL----LIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVG 136
D+ + L + D + HLA A + NP + +N++G ++L G +
Sbjct: 65 LDLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQSV 124
Query: 137 ARILLTSTSEVYGDPLIHPQPETYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIQI 195
++ S+S VYG +P E+ NV+ PI + Y K+ E + Y +
Sbjct: 125 KHLVFASSSSVYGANEKYPFSES--DNVDHPIAL---YAASKKANELMAHSYAHLFQLPC 179
Query: 196 RIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
R F YGP D + F L +P+ V G +R F Y+ D+VDG++ +
Sbjct: 180 TGLRFFTVYGPWGRPD--MALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILLTL 237
Query: 256 E 256
+
Sbjct: 238 D 238
Score = 43 (20.2 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 11/63 (17%), Positives = 27/63 (42%)
Query: 264 NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLR 323
NIG+ + +++ +N + P D + D+S+ ++ + P+ L+
Sbjct: 265 NIGSNNPILLTNFIAILEKTLNKKAIKNFLPLQPGDVPETYADVSQLEKDFQYRPRTPLQ 324
Query: 324 DGL 326
G+
Sbjct: 325 KGV 327
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 200 (75.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 82/326 (25%), Positives = 142/326 (43%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADN---YFTGSKDNLKKWIGHPR-FELIRHDV 87
+LVTG GF+GSH V + + V+ DN Y+ S ++ + R ++ D+
Sbjct: 90 VLVTGATGFVGSH-VSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDL 148
Query: 88 TEPLLI----EV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-- 138
+ L+ +V + HLA A + NP + +N+ G +N+L + K +
Sbjct: 149 NDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPA 208
Query: 139 ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIA 198
I+ S+S VYG L P + + S Y K+ E + Y+ +G+ I
Sbjct: 209 IVWASSSSVYG--LNEKVPFSESDRTDQPA--SLYAATKKAGEEITHTYNHIYGLAITGL 264
Query: 199 RIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQT---RSFCYVSDMVDGLIRLM 255
R F YGP D +F L+G+P+T+ + + R F Y+ D+V G + +
Sbjct: 265 RFFTVYGPWGRPD--MAYFSFTRNILQGKPITIYRGKNRVDLARDFTYIDDIVKGCLGSL 322
Query: 256 E--GENTG---------PV---NIGNPGEFTMLELAETVKELINPGIEIKMVENTPD-DP 300
+ G++TG P N+GN T+ L + +++ + + VE + D
Sbjct: 323 DSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKVKAKRNFVEMPGNGDV 382
Query: 301 RQRKPDISKAKELLGWEPKVKLRDGL 326
+IS A+ G++P L GL
Sbjct: 383 PFTHANISSARNEFGYKPTTDLETGL 408
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 199 (75.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 80/328 (24%), Positives = 144/328 (43%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKK----WIGHPRFELIRH 85
+ +LVTG +GF+G+H V + + V+ DN+ LK+ + ++
Sbjct: 96 LTVLVTGASGFVGTH-VSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEG 154
Query: 86 DVTEPLLIE--VD-----QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
D+ + +L+ D + HLA A + NP + +N+ G +N+L ++K +
Sbjct: 155 DINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQ 214
Query: 139 --ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
I+ S+S VYG L P + + S Y K+ E + Y+ +G+ +
Sbjct: 215 PAIVWASSSSVYG--LNSKVPFSEKDRTDQPA--SLYAATKKAGEGIAHTYNHIYGLSLT 270
Query: 197 IARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTV-QKP--GTQTRSFCYVSDMVDGLIR 253
R F YGP D F L+G+ +TV + P G+ R F Y+ D+V G +
Sbjct: 271 GLRFFTVYGPWGRPDMAYFF--FTKDILKGKTITVFESPDKGSVARDFTYIDDIVKGCLG 328
Query: 254 LME---------GENTGPV-----NIGNPGEFTMLELAETVKELINPGIEIKMVENTPD- 298
++ G+ GP N+GN + +L +++L+ + K++ +
Sbjct: 329 ALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVTILEKLLKMKAKKKIMPLPRNG 388
Query: 299 DPRQRKPDISKAKELLGWEPKVKLRDGL 326
D +I+ A+ LG++P V L GL
Sbjct: 389 DVEFTHANITLAQAELGYKPAVDLETGL 416
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 194 (73.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 73/271 (26%), Positives = 117/271 (43%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 89
+IL+TGGAGFIGS LV ++ + V+V D + G+ +L RF + D+ +
Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62
Query: 90 PL-LIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 142
L V D + HLA + P I+TN++GT +L A+ +
Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122
Query: 143 STS-----EVYGDPL---IHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQ 194
S + D + +H + ++ P S Y K ++ L+ + R +G+
Sbjct: 123 KKSAFRFHHISTDEVYGDLH-STDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLP 181
Query: 195 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRL 254
I N YGP + + +++ I AL G+ L V G Q R + YV D L +
Sbjct: 182 TLITNCSNNYGP-YHFPE-KLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCV 239
Query: 255 MEGENTGPV-NIGNPGEFTMLELAETVKELI 284
G NIG E L++ ET+ EL+
Sbjct: 240 ATTGKVGETYNIGGHNERKNLDVVETICELL 270
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 60/213 (28%), Positives = 88/213 (41%)
Query: 127 NMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFD 186
N L K+ R ST EVYGD +H + ++ P S Y K ++ L+
Sbjct: 117 NALTEDKKSAFRFHHISTDEVYGD--LH-STDDFFTETTPYAPSSPYSASKASSDHLVRA 173
Query: 187 YHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSD 246
+ R +G+ I N YGP + + +++ I AL G+ L V G Q R + YV D
Sbjct: 174 WLRTYGLPTLITNCSNNYGP-YHFPE-KLIPLMILNALAGKSLPVYGNGQQIRDWLYVED 231
Query: 247 MVDGLIRLMEGENTGPV-NIGNPGEFTMLELAETVKELIN------P-GIE-----IKMV 293
L + G NIG E L++ ET+ EL+ P G+ I V
Sbjct: 232 HARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFV 291
Query: 294 ENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ P + D SK LGW P+ G+
Sbjct: 292 ADRPGHDLRYAIDASKIARELGWLPQETFESGM 324
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 191 (72.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 84/315 (26%), Positives = 133/315 (42%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNL---KKWIGHPRFELIRHD 86
M +LVTGGAG+IGSH+V +L E V+V DN TG D L ++ + + R D
Sbjct: 1 MPVLVTGGAGYIGSHVVRQLSEAGYT-VVVYDNLSTGFPDALVHGERLVTGDLSDTARLD 59
Query: 87 VTEPLLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 143
L +E + H A P+K N TLN+LG + G R + +S
Sbjct: 60 A---LFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVERFIFSS 116
Query: 144 TSEVYGDPLIH-PQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
T+ VYG P E+ +NP G K ++E ++ D HG++ R FN
Sbjct: 117 TAAVYGIPDSGVAAEESATVPINPYGT------SKLMSEWMLRDVCAAHGMRSVALRYFN 170
Query: 203 TYG--PRMNIDDGRVVSNFI----AQALRG--EPLTV-----QKP-GTQTRSFCYVSDMV 248
G P+ + + + QA G + + + P GT R + +V D+
Sbjct: 171 VAGADPQARMGQRTPEATHLIKVSCQAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDLA 230
Query: 249 DG----LIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRK 304
L L +G + +N+G ++ E+ + V+ + + P DP
Sbjct: 231 SAHLAALSYLEKGGESTRINVGYGSGSSVREVIDMVRRVSGVHFLAEEAPRRPGDPPSLV 290
Query: 305 PDISKAKELLGWEPK 319
+A+ LLGW P+
Sbjct: 291 ARADRARTLLGWTPR 305
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 190 (71.9 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 80/310 (25%), Positives = 130/310 (41%)
Query: 29 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT 88
N RI V G G +GS +V KL +++ + G D L+ F
Sbjct: 4 NARIYVAGHRGLVGSAIVRKLTAEGYGNLLLRTS---GELD-LRDQAAVAAF----FAAE 55
Query: 89 EPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSE 146
+P D ++ A I P + I N++ N++ + R G +++L ++
Sbjct: 56 QP-----DYVFLAAAKVGGIVANNTYPAEFIYDNLMIEANVIHSSYRTGVSKLLFLGSTC 110
Query: 147 VYGDPLIHPQPETYW--GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTY 204
+Y P E Y G + P Y K +L Y+RQ+G + A N Y
Sbjct: 111 IYPKMASQPIREEYLLTGPLEP--TNEAYAIAKIAGISLCRSYNRQYGTRFIAAMPTNLY 168
Query: 205 GPRMNIDDGR------VVSNFIAQALRGEP-LTVQKPGTQTRSFCYVSDMVDGLIRLMEG 257
GP N D + ++ F + G P +TV G R F +V D+ D + LM
Sbjct: 169 GPNDNFDLEKSHVLPALIRKFHEAKIAGAPTVTVWGTGAPLREFIHVDDVADAALYLMRH 228
Query: 258 -ENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGW 316
E VNIG+ E ++ +LA VK ++ E+ + PD ++ D+S+ L GW
Sbjct: 229 HEGNDIVNIGSGEEISIRDLALLVKIVVGFEGELVFDASKPDGTPRKLSDVSRLHSL-GW 287
Query: 317 EPKVKLRDGL 326
++ L DG+
Sbjct: 288 RHRIGLEDGV 297
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 191 (72.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 79/326 (24%), Positives = 142/326 (43%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKK----WIGHPRFELIRHDV 87
+LVTG AGF+G+H V ++ + V+ DN+ +LK+ + ++ D+
Sbjct: 93 VLVTGAAGFVGTH-VSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDI 151
Query: 88 TEPLLI----EV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-- 138
+ L+ EV + HLA A + NP + +N+ G +N+L + K +
Sbjct: 152 NDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPA 211
Query: 139 ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIA 198
I+ S+S VYG P E + P S Y K+ E + Y+ +G+ +
Sbjct: 212 IVWASSSSVYGLNTKVPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGL 267
Query: 199 RIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKP---GTQTRSFCYVSDMVDGLIRLM 255
R F YGP D F L+G+ +++ + GT R F Y+ D+V G + +
Sbjct: 268 RFFTVYGPWGRPDMAYFF--FTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGCLGAL 325
Query: 256 E---------GENTGPV-----NIGNPGEFTMLELAETVKELINPGIEIKMVENTPD-DP 300
+ G+ G N+GN + +L ++ L+ + +++ + D
Sbjct: 326 DTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKRNIMKLPRNGDV 385
Query: 301 RQRKPDISKAKELLGWEPKVKLRDGL 326
+ +IS A+ LG++P L+ GL
Sbjct: 386 QFTHANISSAQRELGYKPTTDLQTGL 411
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 186 (70.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 84/321 (26%), Positives = 147/321 (45%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
R+ VTG +GF+G HL L ++ + H R++L+ D
Sbjct: 4 RLFVTGLSGFVGKHLQAYLAAAHTPWALLP--------------VPH-RYDLLEPDSLGD 48
Query: 91 LLIEV-DQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARILLTSTSE 146
L E+ D + HLA P ++ +P +T++ N++GTLN+L K G L S+ +
Sbjct: 49 LWPELPDAVIHLAGQTYVPEAFR-DPARTLQINLLGTLNLLQALKARGFSGTFLYISSGD 107
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP 206
VYG P +P R+ Y K AE+L + G ++ +AR FN GP
Sbjct: 108 VYGQVAEAALPIHEELIPHP---RNPYAVSKLAAESLCLQWGITEGWRVLVARPFNHIGP 164
Query: 207 RMNIDDGRVVSNF---IAQALRGEPLTVQKPGT--QTRSFCYVSDMVDGLIRLMEGENTG 261
D V+++ IA+ +G + G +R F V D++ +RL+ G
Sbjct: 165 GQK--DSFVIASAARQIARMKQGLQANRLEVGDIDVSRDFLDVQDVLSAYLRLLSHGEAG 222
Query: 262 PV-NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPR--QRKPDISKAK--ELLGW 316
V N+ + E + EL E + ++ +E+++V++ R QR+ S A+ + GW
Sbjct: 223 AVYNVCSGQEQKIRELIELLADIAQ--VELEIVQDPARMRRAEQRRVRGSHARLHDTTGW 280
Query: 317 EPKVKLRDGLPLMEEDFRSRL 337
+P++ ++ L + D+ SR+
Sbjct: 281 KPEITIKQSLRAILSDWESRV 301
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 158 (60.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 58/188 (30%), Positives = 87/188 (46%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNL---KKWIGHPRFELIRHDVT 88
+LVTGGAG+IGSH V +L+E + V+V DNY S +L KK G L H V
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAVVV-DNYDNSSAASLQRVKKLAGENGNRLSFHQVD 63
Query: 89 ---EPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR- 138
P L ++ D + H A + P+ N++GT+ +L + + G +
Sbjct: 64 LRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKN 123
Query: 139 ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI-QIRI 197
++ +S++ VYG P P E +PI + Y K E + D HR +I +
Sbjct: 124 LVFSSSATVYGWPKEVPCTEE-----SPISATNPYGRTKLFIEEICRDVHRSDSEWKIIL 178
Query: 198 ARIFNTYG 205
R FN G
Sbjct: 179 LRYFNPVG 186
Score = 71 (30.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 22/92 (23%), Positives = 37/92 (40%)
Query: 233 KPGTQTRSFCYVSDMVDGLIRLMEGENTGPV-----NIGNPGEFTMLELAETVKELINPG 287
K GT R + +V D+ DG I + + + N+G ++LE+ ++
Sbjct: 229 KDGTGVRDYIHVMDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKK 288
Query: 288 IEIKMVENTPDDPRQRKPDISKAKELLGWEPK 319
I + M P D KA+ L W+ K
Sbjct: 289 IPLVMAGRRPGDAEVVYASTEKAERELNWKAK 320
>UNIPROTKB|E9PKL9 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI00981359
ProteinModelPortal:E9PKL9 SMR:E9PKL9 Ensembl:ENST00000529048
ArrayExpress:E9PKL9 Bgee:E9PKL9 Uniprot:E9PKL9
Length = 268
Score = 181 (68.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 78/273 (28%), Positives = 117/273 (42%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
Q +MRILVTGG+G +G + K++ + + D F SKD +L
Sbjct: 5 QGSMRILVTGGSGLVGK-AIQKVVADGAG-LPGEDWVFVSSKDA----------DLTDTA 52
Query: 87 VTEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 142
T L +V + HLA +F KYN + + NV N+L A VGAR +++
Sbjct: 53 QTRALFEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVVS 111
Query: 143 STSE-VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIF 201
S ++ D +P ET N P Y KR+ + Y +Q+G
Sbjct: 112 CLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPT 171
Query: 202 NTYGPR--MNIDDGRVVSNFIAQA----LRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
N +GP NI+DG V+ I + G LTV G R F Y D+ I ++
Sbjct: 172 NVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVL 231
Query: 256 EGEN-TGPV--NIGNPGEFTMLELAETVKELIN 285
N P+ ++G E ++ E AE V E ++
Sbjct: 232 REYNEVEPIILSVGEEDEVSIKEAAEAVVEAMD 264
>TAIR|locus:2041974 [details] [associations]
symbol:AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=IDA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.720 GO:GO:0051287 EMBL:AC005824 GO:GO:0048040
KO:K12449 ProtClustDB:PLN02427 EMBL:AF361574 EMBL:AY086830
EMBL:BT001016 EMBL:AY442191 EMBL:AY735589 EMBL:AY924751
IPI:IPI00541963 PIR:G84677 RefSeq:NP_180353.1 UniGene:At.23574
ProteinModelPortal:Q9ZUY6 SMR:Q9ZUY6 STRING:Q9ZUY6 PRIDE:Q9ZUY6
EnsemblPlants:AT2G27860.1 GeneID:817332 KEGG:ath:AT2G27860
TAIR:At2g27860 HOGENOM:HOG000261188 InParanoid:Q9ZUY6 OMA:EYKENAQ
PhylomeDB:Q9ZUY6 BioCyc:ARA:AT2G27860-MONOMER
BioCyc:MetaCyc:AT2G27860-MONOMER ArrayExpress:Q9ZUY6
Genevestigator:Q9ZUY6 GO:GO:0009226 Uniprot:Q9ZUY6
Length = 389
Score = 151 (58.2 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 43/127 (33%), Positives = 63/127 (49%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK----KWIGHPRFELI-- 83
+ I + G GFIGSHL +KL+ ++V+ D Y K L+ +W G +F I
Sbjct: 18 LTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLEPDTVEWSGRIQFHRINI 77
Query: 84 RHDVT-EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 142
+HD E L+ D I +LA +P Y P+ TI +N I L ++ R++
Sbjct: 78 KHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
Query: 143 STSEVYG 149
ST EVYG
Sbjct: 138 STCEVYG 144
Score = 151 (58.2 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 58/206 (28%), Positives = 97/206 (47%)
Query: 95 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIH 154
+D IY A P+ KY + T + G K +G+ L + DP +
Sbjct: 110 LDTIYSNFIDALPVV-KYCSENNKRLIHFSTCEVYG--KTIGS--FLPKDHPLRDDPAFY 164
Query: 155 PQPETY----WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMN- 209
E +G++ R Y K++ E L++ ++G++ I R FN GPRM+
Sbjct: 165 VLKEDISPCIFGSIEK--QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDF 222
Query: 210 ---ID---DG--RVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGEN-- 259
ID +G RV++ F LR EPL + G R+F Y++D ++ ++ ++E
Sbjct: 223 IPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERA 282
Query: 260 TGPV-NIGNPG-EFTMLELAETVKEL 283
G + N+GNP E T+ +LAE + E+
Sbjct: 283 NGHIFNVGNPNNEVTVRQLAEMMTEV 308
Score = 79 (32.9 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 27/88 (30%), Positives = 40/88 (45%)
Query: 251 LIRLMEGENTGPVNIGNPG-EFTMLELAETVKELI----------NPGIEIKMVE---NT 296
+I E N N+GNP E T+ +LAE + E+ +P +++ E
Sbjct: 275 MIENPERANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEGAIESPTVDVSSKEFYGEG 334
Query: 297 PDDPRQRKPDISKAKELLGWEPKVKLRD 324
DD +R PD++ LGW PK L D
Sbjct: 335 YDDSDKRIPDMTIINRQLGWNPKTSLWD 362
>UNIPROTKB|Q13630 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=IEA;IDA;TAS]
[GO:0042356 "GDP-4-dehydro-D-rhamnose reductase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IC] [GO:0007159
"leukocyte cell-cell adhesion" evidence=NAS] [GO:0019673
"GDP-mannose metabolic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005737
eggNOG:COG0451 DrugBank:DB00157 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0009055 GO:GO:0050662 GO:GO:0019835 GO:GO:0016853
EMBL:CH471162 GO:GO:0007159 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV EMBL:U58766
EMBL:AK313560 EMBL:BC001941 EMBL:BC093061 IPI:IPI00014361
RefSeq:NP_003304.1 UniGene:Hs.404119 PDB:4B8W PDBsum:4B8W
ProteinModelPortal:Q13630 SMR:Q13630 IntAct:Q13630 STRING:Q13630
PhosphoSite:Q13630 DMDM:13124123 REPRODUCTION-2DPAGE:IPI00014361
PaxDb:Q13630 PeptideAtlas:Q13630 PRIDE:Q13630 DNASU:7264
Ensembl:ENST00000425753 Ensembl:ENST00000529064 GeneID:7264
KEGG:hsa:7264 UCSC:uc003yza.2 CTD:7264 GeneCards:GC08M144694
HGNC:HGNC:12390 HPA:HPA023361 MIM:137020 neXtProt:NX_Q13630
PharmGKB:PA37056 HOVERGEN:HBG000059 InParanoid:Q13630
OrthoDB:EOG4VT5XR PhylomeDB:Q13630 GenomeRNAi:7264 NextBio:28399
ArrayExpress:Q13630 Bgee:Q13630 CleanEx:HS_TSTA3
Genevestigator:Q13630 GermOnline:ENSG00000104522 GO:GO:0042356
Uniprot:Q13630
Length = 321
Score = 184 (69.8 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 82/292 (28%), Positives = 125/292 (42%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
Q +MRILVTGG+G +G + K++ + + D F SKD +L
Sbjct: 5 QGSMRILVTGGSGLVGK-AIQKVVADGAG-LPGEDWVFVSSKDA----------DLTDTA 52
Query: 87 VTEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 142
T L +V + HLA +F KYN + + NV N+L A VGAR +++
Sbjct: 53 QTRALFEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVVS 111
Query: 143 STSE-VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIF 201
S ++ D +P ET N P Y KR+ + Y +Q+G
Sbjct: 112 CLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPT 171
Query: 202 NTYGPR--MNIDDGRVVSNFIAQA----LRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
N +GP NI+DG V+ I + G LTV G R F Y D+ I ++
Sbjct: 172 NVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVL 231
Query: 256 EGEN-TGPV--NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRK 304
N P+ ++G E ++ E AE V E ++ E+ + T D + +K
Sbjct: 232 REYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTF-DTTKSDGQFKK 282
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 175 (66.7 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 69/241 (28%), Positives = 106/241 (43%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADN----YFTGSK-DNLKKWIGHPRFELIR 84
M+ LVTG AGFIG++ V K + +EV+ DN Y K L F I+
Sbjct: 1 MKYLVTGAAGFIGAN-VSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIK 59
Query: 85 HDVTE-----PLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVG 136
D+ + L + ++ HLA A + NP+ +N++G L +L G
Sbjct: 60 LDLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKI 119
Query: 137 ARILLTSTSEVYGDPLIHPQPETYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIQI 195
++ S+S VYG L P + +V+ PI S Y K+ E + Y + +
Sbjct: 120 EHLVYASSSSVYG--LNQKMPFSTEDSVDHPI---SLYAATKKANELMSHTYSHLYQLPT 174
Query: 196 RIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
R F YGP D + F L GE + V G +R F Y+ D+V+G+IR+
Sbjct: 175 TGLRFFTVYGPWGRPD--MALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQ 232
Query: 256 E 256
+
Sbjct: 233 D 233
Score = 45 (20.9 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 16/74 (21%), Positives = 32/74 (43%)
Query: 264 NIGNPGEFTMLELAETVKELINPGIEIK--MVENTPDDPRQRKPDISKAKELLGWEPKVK 321
NIGN +L+ ++ + GIE K + P D D + +G++ +V
Sbjct: 260 NIGNGSPVQLLDFITALERAL--GIEAKKQFLPMQPGDVHATWADTEDLFKAVGYKSQVD 317
Query: 322 LRDGLPLMEEDFRS 335
+ G+ + +R+
Sbjct: 318 IDTGVAKFVDWYRN 331
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 175 (66.7 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 69/241 (28%), Positives = 106/241 (43%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADN----YFTGSK-DNLKKWIGHPRFELIR 84
M+ LVTG AGFIG++ V K + +EV+ DN Y K L F I+
Sbjct: 1 MKYLVTGAAGFIGAN-VSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIK 59
Query: 85 HDVTE-----PLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVG 136
D+ + L + ++ HLA A + NP+ +N++G L +L G
Sbjct: 60 LDLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKI 119
Query: 137 ARILLTSTSEVYGDPLIHPQPETYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIQI 195
++ S+S VYG L P + +V+ PI S Y K+ E + Y + +
Sbjct: 120 EHLVYASSSSVYG--LNQKMPFSTEDSVDHPI---SLYAATKKANELMSHTYSHLYQLPT 174
Query: 196 RIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
R F YGP D + F L GE + V G +R F Y+ D+V+G+IR+
Sbjct: 175 TGLRFFTVYGPWGRPD--MALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQ 232
Query: 256 E 256
+
Sbjct: 233 D 233
Score = 45 (20.9 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 16/74 (21%), Positives = 32/74 (43%)
Query: 264 NIGNPGEFTMLELAETVKELINPGIEIK--MVENTPDDPRQRKPDISKAKELLGWEPKVK 321
NIGN +L+ ++ + GIE K + P D D + +G++ +V
Sbjct: 260 NIGNGSPVQLLDFITALERAL--GIEAKKQFLPMQPGDVHATWADTEDLFKAVGYKSQVD 317
Query: 322 LRDGLPLMEEDFRS 335
+ G+ + +R+
Sbjct: 318 IDTGVAKFVDWYRN 331
>UNIPROTKB|Q2KIT8 [details] [associations]
symbol:TSTA3 "Tissue specific transplantation antigen P35B"
species:9913 "Bos taurus" [GO:0050577 "GDP-L-fucose synthase
activity" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0019835 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 OMA:IHCAGRV GeneTree:ENSGT00390000004681
CTD:7264 HOVERGEN:HBG000059 OrthoDB:EOG4VT5XR GO:GO:0042350
EMBL:DAAA02037463 EMBL:BC112514 IPI:IPI00728290
RefSeq:NP_001039604.1 UniGene:Bt.64492 STRING:Q2KIT8
Ensembl:ENSBTAT00000049133 GeneID:513158 KEGG:bta:513158
InParanoid:Q2KIT8 NextBio:20870730 Uniprot:Q2KIT8
Length = 321
Score = 181 (68.8 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 85/295 (28%), Positives = 124/295 (42%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RILVTGG+G +G + K++E+ + D F SKD +L T
Sbjct: 9 RILVTGGSGLVG-RAIQKVVEDGAR-LPGEDWVFVSSKDA----------DLTDAAQTRA 56
Query: 91 LLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 146
L +V + HLA +F KYN + + N+ N+L A VG R +++ S
Sbjct: 57 LFQQVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNIHINDNVLHSAFEVGVRKVVSCLST 115
Query: 147 -VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYG 205
++ D +P ET N P Y KR+ + Y +QHG N +G
Sbjct: 116 CIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFG 175
Query: 206 PRMN--IDDGRVVSNFIAQA----LRGEPLTVQKPGTQTRSFCYVSDMVDGLI-RLMEGE 258
P N I+DG V+ I + G LTV G R F Y D+ I L E +
Sbjct: 176 PHDNFSIEDGHVLPGLIHKVHLAKSSGSALTVWGTGRPRRQFIYSLDLARLFIWALREYD 235
Query: 259 NTGPV--NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAK 311
P+ ++G E ++ E AE V E ++ E+ + T D Q K S AK
Sbjct: 236 EVEPIILSVGEEDEVSVQEAAEAVVEAMDFHGEVTF-DTTKSDG-QFKKTASNAK 288
>RGD|1307028 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA;ISO] [GO:0019835 "cytolysis" evidence=IEA;ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA;ISO] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 RGD:1307028
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CH473950 KO:K02377 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 RefSeq:NP_001120927.1
RefSeq:NP_001257718.1 UniGene:Rn.6606 Ensembl:ENSRNOT00000012306
GeneID:300036 KEGG:rno:300036 NextBio:646179 Uniprot:G3V762
Length = 321
Score = 181 (68.8 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 80/291 (27%), Positives = 126/291 (43%)
Query: 29 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDV 87
+MRILVTGG+G +G + K++ + + + + F SKD +L
Sbjct: 7 SMRILVTGGSGLVG-RAIQKVVADGAG--LPGEEWVFVSSKDA----------DLTDAAQ 53
Query: 88 TEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
T+ L +V + HLA +F KYN + + NV N+L A VG R +++
Sbjct: 54 TQALFQKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHINDNVLHSAFEVGTRKVVSC 112
Query: 144 TSE-VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
S ++ D +P ET N P Y KR+ + Y +QHG N
Sbjct: 113 LSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTSVIPTN 172
Query: 203 TYGP--RMNIDDGRVVSNFIAQA----LRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
+GP NI+DG V+ I + G LTV G R F Y D+ I ++
Sbjct: 173 VFGPYDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYSLDLARLFIWVLR 232
Query: 257 GEN-TGPV--NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRK 304
N P+ ++G E ++ E AE V E ++ E+ ++T D + +K
Sbjct: 233 EYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFSGEVTF-DSTKSDGQYKK 282
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 181 (68.8 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 86/310 (27%), Positives = 123/310 (39%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
+I V G G +GS +V KL E ++ LK H +L R E
Sbjct: 18 KIFVAGHRGLVGSAIVRKLQEQGFTNLV------------LKT---HAELDLTRQADVES 62
Query: 91 LLIEVDQIYHLACPASPIFYKYN---PVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSE 146
+ +Y + A N P I N+ N++ A G + +L +S
Sbjct: 63 FFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGSSC 122
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP 206
+Y P PE+ + Y K Y QHG N YGP
Sbjct: 123 IYPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYGP 182
Query: 207 RMNI--DDGRVVS----NFIAQALRG-EPLTVQKPGTQTRSFCYVSDMVDGLIRLMEG-E 258
N ++ V+ F + G E + V G+ R F +V D+ D + L++
Sbjct: 183 NDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRYS 242
Query: 259 NTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENT--PDDPRQRKPDISKAKELLGW 316
VNIG+ E T+ ELAE VKE++ G E K+ + PD ++ D SK L GW
Sbjct: 243 GLEHVNIGSGQEVTIRELAELVKEVV--GFEGKLGWDCTKPDGTPRKLMDSSKLASL-GW 299
Query: 317 EPKVKLRDGL 326
PKV LRDGL
Sbjct: 300 TPKVSLRDGL 309
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 184 (69.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 84/330 (25%), Positives = 139/330 (42%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADN---YFTGS-KDNLKKWIGHPRFELIRH 85
+ +LVTG AGF+GSH + + V+ DN Y+ S K ++ + + ++
Sbjct: 112 LSVLVTGAAGFVGSHC-SLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEG 170
Query: 86 DVTE-PLL------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
D+ + PLL + I HLA A + NP I +N+ G +N+L +AK +
Sbjct: 171 DLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQ 230
Query: 139 --ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
I+ S+S VYG +P E + + P S Y K+ E + Y+ +G+ +
Sbjct: 231 PAIVWASSSSVYGLNTENPFSEEHRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLT 286
Query: 197 IARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQ---TRSFCYVSDMVDGLIR 253
R F YGP D F L G+ + + + R F Y+ D+V G +
Sbjct: 287 GLRFFTVYGPWGRPDMAYFF--FTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVG 344
Query: 254 LME---------GENTGPV-----NIGNPGEFTMLELAETVKELINPGIE---IKMVENT 296
++ G+ G N+GN + L ++ L+ + IKM N
Sbjct: 345 ALDTAEKSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLGTKAKKHLIKMPRNG 404
Query: 297 PDDPRQRKPDISKAKELLGWEPKVKLRDGL 326
D P ++S A + G++P L GL
Sbjct: 405 -DVPYTHA-NVSLAYKDFGYKPTTDLAAGL 432
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 179 (68.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 75/316 (23%), Positives = 146/316 (46%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY---FTGSKDNLKKWIGHPR----F-- 80
MR+ +TGGAGFIGS L L E K+E+++ D T NL+ + GH + F
Sbjct: 1 MRVAITGGAGFIGSQLALNLQE--KHEILIIDKMRSSATFENGNLQSF-GHFKNLLEFDG 57
Query: 81 ELIRHDVT-EPLLIEVDQ-----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 134
EL D+ E +L +++ I+H A + + + K ++TN+ + + L+
Sbjct: 58 ELFAGDINDEKVLKKIEDFKPEIIFHQAAISDTTVF--DQTKVLQTNLNTFKDFIELSID 115
Query: 135 VGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYH-RQHGI 193
+ A+++ S++ VYGD P+T + P ++ Y K + + L Y+ + H +
Sbjct: 116 LNAKLIYASSASVYGDA---KSPQTVGKDEEP---KNPYAFSKLMMDKLAKKYYDKAHLV 169
Query: 194 QIRIARIFNTYGPRMNIDD--GRVVSNFIAQALRGE-PLTVQKPGTQTRSFCYVSDMVDG 250
+R FN YG + +V F Q L G+ P + R F Y+ D+++
Sbjct: 170 GLRY---FNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFTYIKDVINA 226
Query: 251 LIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKA 310
+ ++ + G N+G+ T ++ + +++ + + + + N Q + +K
Sbjct: 227 NLIALDSK-CGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSYQFHTE-AKL 284
Query: 311 KELLGWEPKVKLRDGL 326
+ ++PK L +G+
Sbjct: 285 DQTWDYQPKFSLEEGI 300
>MGI|MGI:98857 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=ISO] [GO:0019835 "cytolysis" evidence=IMP] [GO:0042351
"'de novo' GDP-L-fucose biosynthetic process" evidence=ISO]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 MGI:MGI:98857 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0016853 GO:GO:0019673 HOGENOM:HOG000168011 KO:K02377
GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:X53620 EMBL:X53621 EMBL:X53622 EMBL:X53623
EMBL:X53624 EMBL:X53625 EMBL:X53626 EMBL:X53627 EMBL:X53628
EMBL:M30127 EMBL:M30128 EMBL:AK029632 IPI:IPI00133690 PIR:S12516
RefSeq:NP_112478.1 UniGene:Mm.22596 ProteinModelPortal:P23591
SMR:P23591 STRING:P23591 PhosphoSite:P23591 PaxDb:P23591
PRIDE:P23591 Ensembl:ENSMUST00000023231 GeneID:22122 KEGG:mmu:22122
InParanoid:P23591 NextBio:301985 Bgee:P23591 CleanEx:MM_TSTA3
Genevestigator:P23591 GermOnline:ENSMUSG00000022570 Uniprot:P23591
Length = 321
Score = 179 (68.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 80/291 (27%), Positives = 127/291 (43%)
Query: 29 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDV 87
+MRILVTGG+G +G + K++ + + + + F SKD +L
Sbjct: 7 SMRILVTGGSGLVG-RAIQKVVADGAG--LPGEEWVFVSSKDA----------DLTDAAQ 53
Query: 88 TEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
T+ L +V + HLA +F KYN + + NV N+L A VGAR +++
Sbjct: 54 TQALFQKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHINDNVLHSAFEVGARKVVSC 112
Query: 144 TSE-VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
S ++ D +P ET N P Y KR+ + Y +QHG N
Sbjct: 113 LSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTN 172
Query: 203 TYGP--RMNIDDGRVVSNFIAQALRGEP----LTVQKPGTQTRSFCYVSDMVDGLIRLM- 255
+GP NI+DG V+ I + + LTV G R F Y D+ I ++
Sbjct: 173 VFGPYDNFNIEDGHVLPGLIHKVHLAKSSDSALTVWGTGKPRRQFIYSLDLARLFIWVLR 232
Query: 256 EGENTGPV--NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRK 304
E P+ ++G E ++ E AE V E ++ E+ ++T D + +K
Sbjct: 233 EYSEVEPIILSVGEEDEVSIKEAAEAVVEAMDFNGEVTF-DSTKSDGQYKK 282
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 176 (67.0 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 88/315 (27%), Positives = 137/315 (43%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
+ + +I V G G +GS +V KL + +++ T S+ +L F
Sbjct: 17 EKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLR----THSELDLTSQSDVESFFATEKP 72
Query: 87 VTEPLLI-EVDQIY-HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
V L +V I+ + PA F N I+TNVI + G+ K +L +
Sbjct: 73 VYVILAAAKVGGIHANNTYPAD--FIGVN--LQIQTNVIHSAYTHGVKK-----LLFLGS 123
Query: 145 SEVYGDPLIHPQPET--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
S +Y P PE+ G + P Y K + Y QH N
Sbjct: 124 SCIYPKFAPQPIPESALLTGPLEP--TNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTN 181
Query: 203 TYGPRMNI--DDGRVVSNFI-----AQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
YG N ++ V+ + A+A + + V G+ R F +V D+ D + LM
Sbjct: 182 LYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLM 241
Query: 256 EGENTG--PVNIGNPGEFTMLELAETVKELINPGIEIKMVENT--PDDPRQRKPDISKAK 311
+ + +G VN+G+ E T+ ELAE VKE++ G + K+V +T PD ++ D SK
Sbjct: 242 D-QYSGFEHVNVGSGVEVTIKELAELVKEVV--GFKGKLVWDTTKPDGTPRKLMDSSKLA 298
Query: 312 ELLGWEPKVKLRDGL 326
L GW PK+ L+DGL
Sbjct: 299 SL-GWTPKISLKDGL 312
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 68/256 (26%), Positives = 110/256 (42%)
Query: 96 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR----VGA------RILLTSTS 145
D + HLA + P I+TN++GT +L +A++ +G R ST
Sbjct: 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD 134
Query: 146 EVYGDPLIHP-QPET-----YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
EVYGD L HP + E + S Y K ++ L+ + R +G+ +
Sbjct: 135 EVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTN 193
Query: 200 IFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM-EGE 258
N YGP + + +++ I AL G+PL + G Q R + YV D L ++ EG+
Sbjct: 194 CSNNYGP-YHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK 251
Query: 259 NTGPVNIGNPGEFTMLELAETVKELINPGI--------EIKMVENTPDDPRQRKPDISKA 310
NIG E L++ T+ +L++ + +I V + P R+ D K
Sbjct: 252 AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKI 311
Query: 311 KELLGWEPKVKLRDGL 326
LGW+P G+
Sbjct: 312 SRELGWKPLETFESGI 327
Score = 123 (48.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 33/113 (29%), Positives = 59/113 (52%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 88
M+IL+TGGAGFIGS +V +++N ++ V+ D + G+ ++L R+ D+
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 89 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 134
+ I + D + HLA + P I+TN++GT +L +A++
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARK 113
>UNIPROTKB|E2RM30 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0019673 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 GO:GO:0042350
EMBL:AAEX03008935 RefSeq:XP_532346.2 ProteinModelPortal:E2RM30
Ensembl:ENSCAFT00000002068 GeneID:475116 KEGG:cfa:475116
NextBio:20851008 Uniprot:E2RM30
Length = 321
Score = 174 (66.3 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 81/290 (27%), Positives = 123/290 (42%)
Query: 29 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPR--FELIRHD 86
++RILVTGG+G +G + K++ + + D F SKD R FE +R
Sbjct: 7 SVRILVTGGSGLVG-RAIQKVVADGAG-LPGEDWVFVSSKDADLTDAAQTRALFEKVR-- 62
Query: 87 VTEPLLIEVDQIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
P + HLA +F KYN + + NV N+L A VG R +++
Sbjct: 63 ---PT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHINDNVLHSAFEVGVRKVVSCL 113
Query: 145 SE-VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNT 203
S ++ D +P ET N P Y KR+ + Y +QHG N
Sbjct: 114 STCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNV 173
Query: 204 YGPR--MNIDDGRVVSNFIAQA----LRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEG 257
+GP NI+DG V+ I + G LTV G R F Y D+ I ++
Sbjct: 174 FGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYSLDLARLFIWVLRE 233
Query: 258 EN-TGPV--NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRK 304
N P+ ++G E ++ E AE V E ++ E+ + T D + +K
Sbjct: 234 YNEVEPIILSVGEEDEVSIQEAAEAVVEAMDFHGEVTF-DTTKSDGQFKK 282
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 176 (67.0 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 66/260 (25%), Positives = 115/260 (44%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADN----YFTGSKDNLKKWIGHPRFEL 82
++ + +LVTG AGF+G+H V ++ + V+ DN Y T K + + + +
Sbjct: 89 RNGVSVLVTGAAGFVGTH-VSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFI 147
Query: 83 IRHDVTEPLLI----EV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 135
+ D+ + L+ EV + HLA A + NP + +N+ G +N+L + K
Sbjct: 148 VEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSA 207
Query: 136 GAR--ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 193
+ I+ S+S VYG P E + P S Y K+ E + Y+ +G+
Sbjct: 208 NPQPAIVWASSSSVYGLNTKVPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGL 263
Query: 194 QIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTV---QKPGTQTRSFCYVSDMVDG 250
+ R F YGP D F L+G+ +++ GT R F Y+ D+V G
Sbjct: 264 SLTGLRFFTVYGPWGRPDMAYFF--FTRDILKGKAISIFEGANHGTVARDFTYIDDIVKG 321
Query: 251 LIRLMEGENTGPVNIGNPGE 270
+ ++ T + G+ G+
Sbjct: 322 CLGALD---TAEKSTGSGGK 338
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 173 (66.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 79/305 (25%), Positives = 133/305 (43%)
Query: 59 VADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVD--QIYHLACPASPIFYKYN-PV 115
++D Y K+N + ++ + ++ V L+ E+ ++Y+LA S + ++ PV
Sbjct: 44 LSDIYEEKHKENARLFLHYG--DITDGLVLNKLIHEIKPHEVYNLAAQ-SHVRVSFDIPV 100
Query: 116 KTIKTNVIGTLNMLGLAKRVG----ARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRS 171
T++T +GTLN+L K R S+SE+YGD PQ E+ P RS
Sbjct: 101 YTMETIGLGTLNILEAIKNADNAKEIRFYQASSSEMYGDVKSVPQTES-----TPFNPRS 155
Query: 172 CYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDD-GRVVSNFIAQALRGEPLT 230
Y K A +Y +G+ +FN PR R +++ IA+ L G
Sbjct: 156 PYACAKVFAHYQTINYRESYGLHASTGILFNHESPRRGETFVTRKITSGIAKILAGLEKK 215
Query: 231 VQKPGTQT-RSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIE 289
+ + R + Y D V+ + +++ + I +++ EL E L+N
Sbjct: 216 IYLGNLEAKRDWGYAKDYVEAMWLMLQQDTPDDYVIATGETWSVKELLEYSFNLVN---- 271
Query: 290 IKMVENTPDDPRQRKP---DI-----SKAKELLGWEPKVKLRDGLPLM-EEDFRSRLGV- 339
+ + DP+ +P D+ KAKE LGW+P + +M E DF+S GV
Sbjct: 272 LNWRDFVVIDPKYYRPAEVDLLLGEPKKAKEKLGWQPNTSFHKLIKIMLEHDFKS-YGVM 330
Query: 340 -PKRN 343
P N
Sbjct: 331 LPSSN 335
Score = 148 (57.2 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 79/315 (25%), Positives = 139/315 (44%)
Query: 31 RILVTGGAGFIGSHLVDKLMEN--EKNEVIVADNYFTGSK-DNL--KKWIGHPRFELIRH 85
+ +TG G GS+L + L+ E + +I + F + ++ +K + R L
Sbjct: 4 KAFITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHKENARLFLHYG 63
Query: 86 DVTEPLLI-----EVD--QIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVG- 136
D+T+ L++ E+ ++Y+LA S + ++ PV T++T +GTLN+L K
Sbjct: 64 DITDGLVLNKLIHEIKPHEVYNLAAQ-SHVRVSFDIPVYTMETIGLGTLNILEAIKNADN 122
Query: 137 ---ARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 193
R S+SE+YGD PQ E+ P RS Y K A +Y +G+
Sbjct: 123 AKEIRFYQASSSEMYGDVKSVPQTES-----TPFNPRSPYACAKVFAHYQTINYRESYGL 177
Query: 194 QIRIARIFNTYGPRMNIDD-GRVVSNFIAQALRGEPLTVQKPGTQT-RSFCYVSDMVDGL 251
+FN PR R +++ IA+ L G + + R + Y D V+ +
Sbjct: 178 HASTGILFNHESPRRGETFVTRKITSGIAKILAGLEKKIYLGNLEAKRDWGYAKDYVEAM 237
Query: 252 IRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAK 311
+++ + I +++ EL E L+N + + DP+ +P ++
Sbjct: 238 WLMLQQDTPDDYVIATGETWSVKELLEYSFNLVN----LNWRDFVVIDPKYYRP--AEVD 291
Query: 312 ELLGWEPKVKLRDGL 326
LLG EPK K ++ L
Sbjct: 292 LLLG-EPK-KAKEKL 304
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 171 (65.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 60/199 (30%), Positives = 98/199 (49%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK--KWIG--HPRFELIRH 85
MR+LVTGG+G+IGSH +L++N ++VI+ DN + L + +G HP F +
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 86 DV-TEPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
D+ E L+ E+ D + H A + P++ NV GTL ++ + +
Sbjct: 58 DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 139 -ILLTSTSEVYGD-PLIHPQPETYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIQ 194
+ +S++ VYGD P I P E++ P G +S Y + K + E ++ D + Q
Sbjct: 118 NFIFSSSATVYGDQPKI-PYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWS 171
Query: 195 IRIARIFNTYGPRMNIDDG 213
I + R FN G + D G
Sbjct: 172 IALLRYFNPVGAHPSGDMG 190
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 60/244 (24%), Positives = 100/244 (40%)
Query: 95 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGD-PL 152
+D + H A + P++ NV GTL ++ + + + +S++ VYGD P
Sbjct: 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPK 133
Query: 153 IHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHR-QHGIQIRIARIFNTYGPRMNID 211
I P E++ P +S Y + K + E ++ D + Q I + R FN G + D
Sbjct: 134 I-PYVESF-PTGTP---QSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGD 188
Query: 212 DGR----VVSN---FIAQALRG--EPLTV------QKPGTQTRSFCYVSDMVDGLIRLME 256
G + +N +IAQ G + L + + GT R + +V D+ DG + ME
Sbjct: 189 MGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAME 248
Query: 257 GENTGP-VNIGNPGEF---TMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKE 312
P V+I N G ++L++ + + D D SKA
Sbjct: 249 KLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADR 308
Query: 313 LLGW 316
L W
Sbjct: 309 ELNW 312
>UNIPROTKB|Q74AV4 [details] [associations]
symbol:wbjB "UDP-N-acetylglucosamine 4,6-dehydratase and
UDP-2-acetamido-2,6-dideoxy-alpha-D-xylo-4-hexulose 5-epimerase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003869 InterPro:IPR013692 Pfam:PF02719
Pfam:PF08485 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009103 GO:GO:0003978
HOGENOM:HOG000257079 RefSeq:NP_953295.1 ProteinModelPortal:Q74AV4
GeneID:2685637 KEGG:gsu:GSU2246 PATRIC:22027345 OMA:INAMGLS
ProtClustDB:CLSK870330 BioCyc:GSUL243231:GH27-2226-MONOMER
Uniprot:Q74AV4
Length = 336
Score = 109 (43.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 33/130 (25%), Positives = 63/130 (48%)
Query: 29 NMRILVTGGAGFIGSHLVDKLMENEKNEVIV--------ADNYFTGSKDNLKKWIGHPRF 80
N +L+TGG G G+ ++ + ++ +EV + D + D LK +IG R
Sbjct: 4 NKVLLITGGTGSFGNAVLKRFLDTRISEVRIFSRDEKKQEDMRIALNNDRLKFYIGDVR- 62
Query: 81 ELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLG--LAKRVGAR 138
+D + + VD ++H A ++ P++ ++TN++G N+L +A V
Sbjct: 63 ---DYDSLDSAMKGVDYVFHAAALKQVPSCEFYPMEAVRTNILGAENVLNASIANHVKKV 119
Query: 139 ILLTSTSEVY 148
I+L++ VY
Sbjct: 120 IVLSTDKAVY 129
Score = 107 (42.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 35/117 (29%), Positives = 53/117 (45%)
Query: 177 KRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGT 236
K + E LM R I R YG M G V+ F+ Q G+ LT+ P
Sbjct: 138 KAMMEKLMVAKSRTTDIT-RTVLCATRYGNVM-ASRGSVIPLFVQQIKEGKSLTLTDPN- 194
Query: 237 QTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMV 293
TR + D VD ++ N+G + + T+ +LA+ +KEL + G EIK++
Sbjct: 195 MTRFLMSLEDSVDLVLYAFAHANSGDILVQKSPASTIRDLAQALKELFSAGNEIKII 251
>TIGR_CMR|GSU_2246 [details] [associations]
symbol:GSU_2246 "polysaccharide biosynthesis domain
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003869 InterPro:IPR013692 Pfam:PF02719
Pfam:PF08485 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009103 GO:GO:0003978
HOGENOM:HOG000257079 RefSeq:NP_953295.1 ProteinModelPortal:Q74AV4
GeneID:2685637 KEGG:gsu:GSU2246 PATRIC:22027345 OMA:INAMGLS
ProtClustDB:CLSK870330 BioCyc:GSUL243231:GH27-2226-MONOMER
Uniprot:Q74AV4
Length = 336
Score = 109 (43.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 33/130 (25%), Positives = 63/130 (48%)
Query: 29 NMRILVTGGAGFIGSHLVDKLMENEKNEVIV--------ADNYFTGSKDNLKKWIGHPRF 80
N +L+TGG G G+ ++ + ++ +EV + D + D LK +IG R
Sbjct: 4 NKVLLITGGTGSFGNAVLKRFLDTRISEVRIFSRDEKKQEDMRIALNNDRLKFYIGDVR- 62
Query: 81 ELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLG--LAKRVGAR 138
+D + + VD ++H A ++ P++ ++TN++G N+L +A V
Sbjct: 63 ---DYDSLDSAMKGVDYVFHAAALKQVPSCEFYPMEAVRTNILGAENVLNASIANHVKKV 119
Query: 139 ILLTSTSEVY 148
I+L++ VY
Sbjct: 120 IVLSTDKAVY 129
Score = 107 (42.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 35/117 (29%), Positives = 53/117 (45%)
Query: 177 KRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGT 236
K + E LM R I R YG M G V+ F+ Q G+ LT+ P
Sbjct: 138 KAMMEKLMVAKSRTTDIT-RTVLCATRYGNVM-ASRGSVIPLFVQQIKEGKSLTLTDPN- 194
Query: 237 QTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMV 293
TR + D VD ++ N+G + + T+ +LA+ +KEL + G EIK++
Sbjct: 195 MTRFLMSLEDSVDLVLYAFAHANSGDILVQKSPASTIRDLAQALKELFSAGNEIKII 251
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 167 (63.8 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 66/222 (29%), Positives = 101/222 (45%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKW--IGHPRFELIRHDV 87
M ILVTGGAG+IG+H V +L+ N +EVIV DN S + L + I + D+
Sbjct: 1 MTILVTGGAGYIGTHTVVELL-NAGSEVIVLDNLSNSSIEALDRVERITGKSVTFYQGDI 59
Query: 88 TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-I 139
L++ +D + H A + P+K + NV GTL + + + +
Sbjct: 60 LNKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNL 119
Query: 140 LLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFD-YHRQHGIQIRIA 198
+ +S++ VYGDP P E + P G + Y + K + E ++ D +H I
Sbjct: 120 VFSSSATVYGDPASLPITEDF-----PTGATNPYGQSKLMVEHILADLHHSDPSWNIARL 174
Query: 199 RIFNTYGPR----MNIDDGRVVSN---FIAQALRG--EPLTV 231
R FN G + D + +N FIAQ G E L+V
Sbjct: 175 RYFNPVGAHASGLIGEDPNDIPNNLMPFIAQVAVGKREALSV 216
Score = 115 (45.5 bits), Expect = 0.00044, P = 0.00044
Identities = 58/248 (23%), Positives = 98/248 (39%)
Query: 95 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLI 153
+D + H A + P+K + NV GTL + + + ++ +S++ VYGDP
Sbjct: 74 IDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNLVFSSSATVYGDPAS 133
Query: 154 HPQPETY-WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDD 212
P E + G NP G E + L + ++R + + +D
Sbjct: 134 LPITEDFPTGATNPYGQSKLMVE--HILADLHHSDPSWNIARLRYFNPVGAHASGLIGED 191
Query: 213 GRVVSN----FIAQALRG--EPLTV---QKP---GTQTRSFCYVSDMVDGLIRLMEGENT 260
+ N FIAQ G E L+V P GT R + +V D+ G ++ +E T
Sbjct: 192 PNDIPNNLMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYIHVVDLAIGHLKALEKLAT 251
Query: 261 GP----VNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGW 316
P N+G +++L++ + ++ I + P D D AK L W
Sbjct: 252 KPGLVTYNLGTGQGYSVLDMVKAFEKACGKSIAYLIAPRRPGDIAACYADPDHAKTDLDW 311
Query: 317 EPKVKLRD 324
+ L D
Sbjct: 312 QATHSLED 319
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 122 (48.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 64/250 (25%), Positives = 110/250 (44%)
Query: 114 PVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLIHPQPETYWGNVNPIG-VRS 171
P++ N+ GT+ +L + R I+ +S++ VYGDP P E + P+G +
Sbjct: 105 PLEYYNVNLTGTIRLLEAMEAYSVRNIVFSSSATVYGDPQYLPLDEKH-----PVGGCTN 159
Query: 172 CYDEGKRVAETLMFDYHR-QHGIQIRIARIFNTYGPR---MNIDDGRVVSN----FIAQA 223
Y + K E ++ D + + G + R FN G M +D + + N ++AQ
Sbjct: 160 PYGKSKYFIEEMIQDLCKAEKGWNAILLRYFNPIGAHESGMIGEDPQGIPNNLMPYVAQV 219
Query: 224 LRG--EPLTV------QKPGTQTRSFCYVSDMVDGLIRLMEG--ENTGP--VNIGNPGEF 271
G E L+V GT R + +V D+ G I ++ EN G N+G +
Sbjct: 220 AVGRQEFLSVFGNDYETADGTGIRDYIHVVDLAKGHIAALKKLKENCGCKIYNLGTGTGY 279
Query: 272 TMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEE 331
++L++ + +++ I+ K+ D + A+ LGW K GL M E
Sbjct: 280 SVLQMVQAMEKASGREIKYKITGRREGDVAACYANPELAERELGW----KAAFGLDKMCE 335
Query: 332 D-FRSRLGVP 340
D +R +L P
Sbjct: 336 DLWRWQLQNP 345
Score = 84 (34.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 20/32 (62%), Positives = 23/32 (71%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADN 62
RILVTGGAG+IGSH V +L E E +V DN
Sbjct: 8 RILVTGGAGYIGSHCVLQLAE-AGYEPVVIDN 38
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 160 (61.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 76/322 (23%), Positives = 129/322 (40%)
Query: 28 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDV 87
S R+ + G G +GS + +L + E+++ ++D L + +
Sbjct: 2 SKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLR------TRDELNLLDSRAVHDFFASE- 54
Query: 88 TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 145
+DQ+Y A I P I N++ N++ A + ++L +S
Sbjct: 55 ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108
Query: 146 EVYGDPLIHPQP----ETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIF 201
+Y P + QP E G + P Y K L Y+RQ+G R
Sbjct: 109 CIY--PKLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPT 164
Query: 202 NTYGPRMNI--DDGRVVSNFI-----AQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRL 254
N YGP N + V+ + A A + V GT R F +V DM I +
Sbjct: 165 NLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHV 224
Query: 255 MEG------ENTGP----VNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRK 304
ME ENT P +N+G + T+ ELA+T+ +++ + + PD ++
Sbjct: 225 MELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKL 284
Query: 305 PDISKAKELLGWEPKVKLRDGL 326
D+++ +L GW ++ L GL
Sbjct: 285 LDVTRLHQL-GWYHEISLEAGL 305
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 128 (50.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 57/203 (28%), Positives = 89/203 (43%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIV--ADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+LV+GGAG+IGSH V +L+ + V+V DN S +KK L H V
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVDL 65
Query: 89 ------EPLLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-I 139
E + E D + H A + P+ N++GT+ +L + + G + +
Sbjct: 66 RDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKNL 125
Query: 140 LLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFD-YHRQHGIQIRIA 198
+ +S++ VYG P P E + PI + Y K E + D Y +I +
Sbjct: 126 VFSSSATVYGSPKEVPCTEEF-----PISALNPYGRTKLFIEEICRDVYGSDPEWKIILL 180
Query: 199 RIFNTYG--PRMNI-DDGRVVSN 218
R FN G P +I +D R + N
Sbjct: 181 RYFNPVGAHPSGDIGEDPRGIPN 203
Score = 74 (31.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 233 KPGTQTRSFCYVSDMVDGLI---RLMEGENTG--PVNIGNPGEFTMLELAETVKELINPG 287
K GT R + +V D+ DG I R +E G N+G ++LE+ + ++
Sbjct: 230 KDGTGVRDYIHVIDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKK 289
Query: 288 IEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRD 324
I + + P D +A+ L W+ K + +
Sbjct: 290 IPLVIAGRRPGDAEVVYASTERAESELNWKAKYGIEE 326
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 162 (62.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 54/189 (28%), Positives = 86/189 (45%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIG-HP---RFELIRHDV 87
+LVTGGAG+IGSH +L+ + V + DN G+ +K P R + I D+
Sbjct: 97 VLVTGGAGYIGSHAALRLLR-DSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADL 155
Query: 88 TEPLLIE-------VDQIYHLACPA---SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 137
+PL +E D + H A A Y I +N +G L +A+
Sbjct: 156 GDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLE--AMARHKVK 213
Query: 138 RILLTSTSEVYGDPLIHPQPE-TYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
+++ +ST YG+P P E T +NP Y + K++AE ++ D+ + + +
Sbjct: 214 KLIYSSTCATYGEPEKMPITEDTPQVPINP------YGKAKKMAEDMILDFSKNSDMAVM 267
Query: 197 IARIFNTYG 205
I R FN G
Sbjct: 268 ILRYFNVIG 276
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 135 (52.6 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSK---DNLKKWIG-HPRFELIRHDV 87
+L+TGG G+IGS L+EN+ +V++ DN + S D ++ G P F + D+
Sbjct: 6 VLITGGTGYIGSFTSLALLENDY-DVVIVDNLYNSSAVAIDRIELICGKRPAFHNV--DI 62
Query: 88 TEPLLI--------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGAR 138
T+ + E+D + H A + P++ + NV G++++L + K
Sbjct: 63 TDEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHNVCN 122
Query: 139 ILLTSTSEVYGD----PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDY 187
I+ +S++ VYGD P + P PE PIG + Y K E ++ D+
Sbjct: 123 IVFSSSATVYGDATRVPNMIPIPEHC-----PIGPTNTYGRTKSTIEDVISDH 170
Score = 66 (28.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 19/97 (19%), Positives = 44/97 (45%)
Query: 233 KPGTQTRSFCYVSDMVDGLIRLME--GENTGPV---NIGNPGEFTMLELAETVKELINPG 287
+ GT R + +V D+ G + + +N V N+G+ T+ E+ + ++
Sbjct: 243 RDGTAIRDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTVFEMIKAFSSVVGRD 302
Query: 288 IEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRD 324
+ ++V D + + A + LGW+ ++++ D
Sbjct: 303 LPYEVVPRRQGDVLDLTANPALANKELGWKTELRMED 339
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 149 (57.5 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 56/190 (29%), Positives = 92/190 (48%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDN---LKKWIGH--PRFE--LIR 84
+LVTGGAG+IGSH V +L+EN + +VADN + D+ L+ H P +E L
Sbjct: 14 VLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 72
Query: 85 HDVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILL 141
E + E +D + H A + P++ N++GT+ +L L ++ ++ +
Sbjct: 73 RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVF 132
Query: 142 TSTSEVYGD----PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHR--QHGIQI 195
+S++ VYGD P + P PE P+G + Y K E ++ D + + +
Sbjct: 133 SSSATVYGDATRFPNMIPIPEEC-----PLGPTNPYGHTKYAIENILNDLYNSDKKSWKF 187
Query: 196 RIARIFNTYG 205
I R FN G
Sbjct: 188 AILRYFNPIG 197
Score = 56 (24.8 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 24/102 (23%), Positives = 43/102 (42%)
Query: 233 KPGTQTRSFCYVSDMVDGLIRLME-----GENTGPV---NIGNPGEFTMLELAETVKELI 284
+ GT R + +V D+ G I ++ EN G N+G+ T+ E+ +
Sbjct: 240 RDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKAS 299
Query: 285 NPGIEIKMVENTPDDPRQ--RKPDISKAKELLGWEPKVKLRD 324
+ K+ D KPD +AK L W+ ++++ D
Sbjct: 300 GIDLPYKVTGRRAGDVLNLTAKPD--RAKRELKWQTELQVED 339
>TIGR_CMR|BA_3248 [details] [associations]
symbol:BA_3248 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0030283 "testosterone dehydrogenase [NAD(P)]
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 HOGENOM:HOG000167989 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016853 GO:GO:0044237 OMA:ERFGNKS
RefSeq:NP_845549.1 RefSeq:YP_019886.1 RefSeq:YP_029273.1
ProteinModelPortal:Q81NF3 DNASU:1084046
EnsemblBacteria:EBBACT00000013025 EnsemblBacteria:EBBACT00000016605
EnsemblBacteria:EBBACT00000023035 GeneID:1084046 GeneID:2820109
GeneID:2852271 KEGG:ban:BA_3248 KEGG:bar:GBAA_3248 KEGG:bat:BAS3016
ProtClustDB:CLSK918137 BioCyc:BANT260799:GJAJ-3078-MONOMER
BioCyc:BANT261594:GJ7F-3182-MONOMER Uniprot:Q81NF3
Length = 328
Score = 130 (50.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 69/274 (25%), Positives = 120/274 (43%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSK---DNLKKWIGHPRFELIRHD 86
M++LVTGG GF+G L +L +N EV T K N K++ P + R
Sbjct: 1 MKMLVTGGTGFLGQKLAFRL-KNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLED--RER 57
Query: 87 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 145
V + + + D I+H +SP + KY NV+GT +++ +++ G R++ ST
Sbjct: 58 VLQ-VCKDKDYIFHSGAHSSP-WGKYEDF--YNANVLGTKHIIEGSQKYGIKRLIHVSTP 113
Query: 146 EVYGDPLIHPQPETYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTY 204
+Y + + + N P + Y K +AE + D HG+ + R +
Sbjct: 114 SIY---FYYDERQNVVENAKLPDTFVNHYATTKYMAEQAI-DQAFAHGLPVITIRPRALF 169
Query: 205 GPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTR--SFCYVSDMVDGLIRLMEG-ENT- 260
GP D ++ I +G + + GT+ YV ++VD L+ M ++T
Sbjct: 170 GP----GDNAILPRLIKVCEKG---ALPRIGTENVLVDITYVENVVDALLLCMHSPKHTL 222
Query: 261 GP-VNIGNPGEFTMLELAETVKELINPGIEIKMV 293
G NI N + E+ E V + ++ + K +
Sbjct: 223 GQKYNITNDERINLYEVIENVMKRLDKEVRYKKI 256
Score = 66 (28.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 271 FTMLELAETVKELINPGIEIKMVENTPDD-PRQRKPDISKAKELLGWEPKVKLRDGL 326
FT+ + E + + I G E + + T + + I KAKE LG+ PKV + +G+
Sbjct: 262 FTLAAILEGISKTILFGKEPILTKYTVSVLSKSQTLSIDKAKEELGYAPKVSIEEGI 318
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 155 (59.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 73/297 (24%), Positives = 124/297 (41%)
Query: 28 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
S +LVTGG+G +G + + E +K N+V V + S +LK R E R
Sbjct: 6 SKRTVLVTGGSGLVGKGIEKYVKETDKSNDVWV---FMRSSDCDLKS-----R-ESTRSY 56
Query: 87 VTEPLLIEVDQIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
+ I+ + HLA +F KY V+ + N+ N+L K ++
Sbjct: 57 FEK---IKPTHVIHLAARVGGLFSNMKYK-VEFFRENIDINDNVLACCKEFNVVKCVSCL 112
Query: 145 SE-VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNT 203
S ++ D +P ET N P Y KR+ + L Y+ ++G + N
Sbjct: 113 STCIFPDKTTYPIDETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNI 172
Query: 204 YGPRMN--IDDGRVVSNFIAQ---ALRG-EPLTVQKPGTQTRSFCYVSDMVDGLIRLMEG 257
YGP N + DG V+ I + A++ + LT+ G R F Y D+ + +
Sbjct: 173 YGPHDNYHLTDGHVIPGLIHKTYLAMKNNQDLTIMGTGKPLRQFIYSYDLAKYFVWTLNN 232
Query: 258 -ENTGPV--NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAK 311
E P+ ++G E ++ ++A + E + + K++ +T Q K S K
Sbjct: 233 YEEMSPLILSVGEEDEISIADVARLITEAME--FKGKLIFDTSKADGQYKKTASNLK 287
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 67/259 (25%), Positives = 119/259 (45%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSK---DNLKKWIG-HPRFELIRH 85
M++LVTGG G+IGSH ++++ VI+ DN + D ++K IG P+F ++
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVIL-DNLYNSKVTVLDRIEKVIGVRPQF--VQG 57
Query: 86 DVTEP-LLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
D+ + LL++ ++ + H A + P++ NV GTL ++ + G +
Sbjct: 58 DIRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK 117
Query: 139 ILLTSTSE-VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIQIR 196
L+ S+S VYG+P P E++ P + Y K + E + D+ + + I
Sbjct: 118 SLVFSSSATVYGEPTSVPITESF-----PTKAANPYGRSKLMVEECLTDFQKANPDWSIT 172
Query: 197 IARIFNTYG--PRMNI-DDGRVVSN----FIAQALRG--EPLTVQKPGTQTRSFCYVSDM 247
+ R FN G P + +D + + N F+ Q G E L+V T+ V D
Sbjct: 173 LLRYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDY 232
Query: 248 VDGLIRLMEGENTGPVNIG 266
+ ++ L +G +G
Sbjct: 233 IH-VMDLADGHIAALKKVG 250
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 67/259 (25%), Positives = 119/259 (45%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSK---DNLKKWIG-HPRFELIRH 85
M++LVTGG G+IGSH ++++ VI+ DN + D ++K IG P+F ++
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVIL-DNLYNSKVTVLDRIEKVIGVRPQF--VQG 57
Query: 86 DVTEP-LLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
D+ + LL++ ++ + H A + P++ NV GTL ++ + G +
Sbjct: 58 DIRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK 117
Query: 139 ILLTSTSE-VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIQIR 196
L+ S+S VYG+P P E++ P + Y K + E + D+ + + I
Sbjct: 118 SLVFSSSATVYGEPTSVPITESF-----PTKAANPYGRSKLMVEECLTDFQKANPDWSIT 172
Query: 197 IARIFNTYG--PRMNI-DDGRVVSN----FIAQALRG--EPLTVQKPGTQTRSFCYVSDM 247
+ R FN G P + +D + + N F+ Q G E L+V T+ V D
Sbjct: 173 LLRYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDY 232
Query: 248 VDGLIRLMEGENTGPVNIG 266
+ ++ L +G +G
Sbjct: 233 IH-VMDLADGHIAALKKVG 250
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 113 (44.8 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVA--DNYFTGSKDNLKKWIGHPR-----FEL-- 82
ILVTGGAGFIG+H V +L+++ I+ DN + D +++ +G F L
Sbjct: 9 ILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNLGD 68
Query: 83 IRH--DVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
+R+ D+ E L + D + H A + NP + N++GT+N+ + +
Sbjct: 69 LRNKGDI-EKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 139 ILLTSTSE-VYGDPLIHPQPETY-WGNVNPIG 168
+++ S+S VYG P P E + +NP G
Sbjct: 128 MMVFSSSATVYGQPEKIPCMEDFELKAMNPYG 159
Score = 71 (30.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 23/91 (25%), Positives = 38/91 (41%)
Query: 235 GTQTRSFCYVSDMVDGLI----RLMEGENTG--PVNIGNPGEFTMLELAETVKELINPGI 288
G+ R + +V D+ DG I +L G N+G ++LE+ ++ I
Sbjct: 236 GSAVRDYIHVMDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKI 295
Query: 289 EIKMVENTPDDPRQRKPDISKAKELLGWEPK 319
IK+ D KA++ LGW+ K
Sbjct: 296 PIKLCPRRSGDATAVYASTEKAEKELGWKAK 326
Score = 48 (22.0 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 165 NPIGVR---SCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFI 220
NP+G S ++ K + LM Y +Q + R+ + N YG +DG V ++I
Sbjct: 188 NPVGAHESGSIGEDPKGIPNNLM-PYIQQVAVG-RLPEL-NVYGHDYPTEDGSAVRDYI 243
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 121 (47.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 57/200 (28%), Positives = 91/200 (45%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIV--ADNYFTGSKDNLKKWIGHP-----RFEL-- 82
ILVTGGAGFIG+H V +L+ I+ DN + +++ +G F L
Sbjct: 9 ILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNLGD 68
Query: 83 IRH--DVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
+R+ D+ E L D + H A + NP + N++GT+N+ + +
Sbjct: 69 LRNKGDI-EKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 139 ILLTSTSE-VYGDPLIHPQPETY-WGNVNPIGVRSCYDEGKRVAETLMFDYHR-QHGIQI 195
+++ S+S VYG P I P E + +NP G R+ K E + D H + +I
Sbjct: 128 MMVFSSSATVYGQPEIVPCVEDFELQAMNPYG-RT-----KLFLEEIARDIHAAEPEWKI 181
Query: 196 RIARIFNTYGPRMNIDDGRV 215
+ R FN G + GR+
Sbjct: 182 ILLRYFNPVGAH---ESGRI 198
Score = 75 (31.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 23/91 (25%), Positives = 39/91 (42%)
Query: 235 GTQTRSFCYVSDMVDG----LIRLMEGENTG--PVNIGNPGEFTMLELAETVKELINPGI 288
G+ R + +V D+ DG L +L G N+G ++LE+ + ++ I
Sbjct: 236 GSAVRDYIHVMDLADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGKKI 295
Query: 289 EIKMVENTPDDPRQRKPDISKAKELLGWEPK 319
IK+ D KA++ LGW+ K
Sbjct: 296 PIKLCPRRAGDATAVYASTQKAEKELGWKAK 326
>TIGR_CMR|CBU_0688 [details] [associations]
symbol:CBU_0688 "GDP-fucose synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0009242 "colanic acid biosynthetic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GenomeReviews:AE016828_GR
GO:GO:0044237 HOGENOM:HOG000168011 HSSP:P32055 EMBL:AF387640
ProteinModelPortal:Q93N55 PATRIC:17930059 ProtClustDB:CLSK914241
BioCyc:CBUR227377:GJ7S-686-MONOMER Uniprot:Q93N55
Length = 332
Score = 105 (42.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 56/239 (23%), Positives = 96/239 (40%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
Q + I VTG G GS ++ +L + + +I T + L FE ++
Sbjct: 2 QKDAPIFVTGHRGLAGSAILRRLKKQGYSSLI------TRTHQELDLTNKEKVFEFFANN 55
Query: 87 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 145
E + + ++ + +PV I+ N+ N++ + R R+L +S
Sbjct: 56 CPEYVFLAAARVGGINDS------NLHPVDFIRDNLAIQWNVIEASFRYKVKRLLFLGSS 109
Query: 146 EVYGDPLIHPQPETYW--GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNT 203
+Y + P E Y+ G + P Y K + Y+RQ+ Q A N
Sbjct: 110 CIYSNDAPRPLKEIYFNSGKLEP--TNRAYSTAKIAGIEHCWAYNRQYKTQYLCAMPTNL 167
Query: 204 YGPRMNID--DGRVVSNFIA---QAL-RGEP-LTVQKPGTQTRSFCYVSDMVDGLIRLM 255
+GP N D +G VV++ I+ QA + +P + G R F Y D+ + LM
Sbjct: 168 FGPNDNYDLENGHVVASLISKIHQAKEQKKPNFVLWGSGKAKREFLYSDDLAEACCHLM 226
Score = 92 (37.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 23/87 (26%), Positives = 47/87 (54%)
Query: 242 CYVSDMVDGLIRLMEGENTGP--VNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDD 299
C++ ++ D +++ + G++ P VNIG+ E ++ ELA ++++I +I + PD
Sbjct: 223 CHLMNLPDDIVKSVFGQDDQPPIVNIGSGKEISIYELALLIQDIIGYQGDIIWDHSKPDG 282
Query: 300 PRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D+S + LGW + L G+
Sbjct: 283 ALTKVMDVS-LMQYLGWSAREGLVSGI 308
>RGD|628727 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IDA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=TAS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IDA] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:628727 GO:GO:0043231
GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694
CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558 EMBL:AB000199
IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 153 (58.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 62/197 (31%), Positives = 96/197 (48%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKN--EVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
LVTGG GF+G H+V L+E E E+ V D + + + LK G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEELKT--GPVQVTAIQGDVTQA 70
Query: 91 LLIEVDQI-YHLACPAS---PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TSTS 145
+ H+ + +F K +P K NV GT N++ + G R+L+ TS+
Sbjct: 71 HEVAAAMAGSHVVIHTAGLVDVFGKASPETIHKVNVQGTQNVIDACVQTGTRLLVYTSSM 130
Query: 146 EVYGDPLIHPQPETYWGNVN-PIGV--RSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
EV G P + P Y GN + P R Y K +AE L+ + + + G++ R+F
Sbjct: 131 EVVG-PNVKGHP-FYRGNEDTPYEAIHRHPYPCSKALAEQLVLEANGRKGLRFG-GRLFR 187
Query: 203 TYGPRMNIDDGRV-VSN 218
P +++ GRV V N
Sbjct: 188 AI-PA-SVEHGRVYVGN 202
>UNIPROTKB|O35048 [details] [associations]
symbol:Hsd3b7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:628727
GO:GO:0043231 GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0006694 CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558
EMBL:AB000199 IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 153 (58.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 62/197 (31%), Positives = 96/197 (48%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKN--EVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
LVTGG GF+G H+V L+E E E+ V D + + + LK G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEELKT--GPVQVTAIQGDVTQA 70
Query: 91 LLIEVDQI-YHLACPAS---PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TSTS 145
+ H+ + +F K +P K NV GT N++ + G R+L+ TS+
Sbjct: 71 HEVAAAMAGSHVVIHTAGLVDVFGKASPETIHKVNVQGTQNVIDACVQTGTRLLVYTSSM 130
Query: 146 EVYGDPLIHPQPETYWGNVN-PIGV--RSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
EV G P + P Y GN + P R Y K +AE L+ + + + G++ R+F
Sbjct: 131 EVVG-PNVKGHP-FYRGNEDTPYEAIHRHPYPCSKALAEQLVLEANGRKGLRFG-GRLFR 187
Query: 203 TYGPRMNIDDGRV-VSN 218
P +++ GRV V N
Sbjct: 188 AI-PA-SVEHGRVYVGN 202
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 121 (47.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 55/187 (29%), Positives = 81/187 (43%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIV--ADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
ILVTGGAG+IGSH V +L+ N V++ DN S +K G L H V
Sbjct: 5 ILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQVDL 64
Query: 89 --EPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-I 139
+P L +V D + H A + P+ N+I T+ +L + G + +
Sbjct: 65 RDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGCKKL 124
Query: 140 LLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHR-QHGIQIRIA 198
+ +S++ VYG P P E +P+ S Y K E + D R +I +
Sbjct: 125 VFSSSATVYGWPKEVPCTEE-----SPLSGMSPYGRTKLFIEDICRDVQRGDPEWRIIML 179
Query: 199 RIFNTYG 205
R FN G
Sbjct: 180 RYFNPVG 186
Score = 73 (30.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 25/90 (27%), Positives = 40/90 (44%)
Query: 233 KPGTQTRSFCYVSDMVDGLI-RLMEGENT--G--PVNIGNPGEFTMLELAETVKELINPG 287
K GT R + +V D+ DG I L + ++T G N+G T+LE+ + ++
Sbjct: 229 KDGTGVRDYIHVVDLADGHICALQKLDDTEIGCEVYNLGTGKGTTVLEMVDAFEKASGMK 288
Query: 288 IEIKMVENTPDDPRQRKPDISKAKELLGWE 317
I + V P D KA+ L W+
Sbjct: 289 IPLVKVGRRPGDAETVYASTEKAERELNWK 318
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 151 (58.2 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 56/199 (28%), Positives = 97/199 (48%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNL---KKWIG-HPRFELIRH 85
MR+LVTGG+G+IGSH +L+++ ++V++ DN + L ++ G P F +
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQSG-HDVVILDNLCNSKRSVLPVIERLSGKQPTF--VEG 57
Query: 86 DV-TEPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
D+ E L+ E+ + + H A + P++ NV GTL ++ + +
Sbjct: 58 DIRNEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 139 -ILLTSTSEVYGD-PLIHPQPETYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIQ 194
+ +S++ VYGD P I P E++ P G +S Y + K + E ++ D + Q
Sbjct: 118 NFIFSSSATVYGDQPKI-PYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPEWS 171
Query: 195 IRIARIFNTYGPRMNIDDG 213
I + R FN G + D G
Sbjct: 172 IALLRYFNPVGAHPSGDMG 190
>UNIPROTKB|E9PP14 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI01012947
ProteinModelPortal:E9PP14 SMR:E9PP14 Ensembl:ENST00000533817
ArrayExpress:E9PP14 Bgee:E9PP14 Uniprot:E9PP14
Length = 198
Score = 139 (54.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 59/201 (29%), Positives = 87/201 (43%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
Q +MRILVTGG+G +G + K++ + + D F SKD +L
Sbjct: 5 QGSMRILVTGGSGLVGK-AIQKVVADGAG-LPGEDWVFVSSKDA----------DLTDTA 52
Query: 87 VTEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 142
T L +V + HLA +F KYN + + NV N+L A VGAR +++
Sbjct: 53 QTRALFEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVVS 111
Query: 143 STSE-VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIF 201
S ++ D +P ET N P Y KR+ + Y +Q+G
Sbjct: 112 CLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPT 171
Query: 202 NTYGPR--MNIDDGRVVSNFI 220
N +GP NI+DG V+ I
Sbjct: 172 NVFGPHDNFNIEDGHVLPGLI 192
>ZFIN|ZDB-GENE-061013-348 [details] [associations]
symbol:zgc:153776 "zgc:153776" species:7955 "Danio
rerio" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-061013-348 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
UniGene:Dr.92565 EMBL:BC124732 IPI:IPI00805523
RefSeq:NP_001070752.1 ProteinModelPortal:Q08BG6 PRIDE:Q08BG6
GeneID:768139 KEGG:dre:768139 InParanoid:Q08BG6 NextBio:20918459
Bgee:Q08BG6 Uniprot:Q08BG6
Length = 320
Score = 149 (57.5 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 76/295 (25%), Positives = 126/295 (42%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKD-NLKKWIGHPR--FELIRH 85
MR+LVTGG+G +G +++++++E E + + F SKD NL R F+ R
Sbjct: 8 MRVLVTGGSGLVG-RAIERVVKDEGRE---GEEWTFLSSKDANLLS-AEETRAIFQKYRP 62
Query: 86 DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 145
L V ++ + F++ N I NV+ T N G+ K V ST
Sbjct: 63 THVIHLAAMVGGLFR-NMRQNLDFWRNNVF--INDNVLQTANEFGVVKVVSC----LSTC 115
Query: 146 EVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYG 205
++ D +P ET N P Y KR+ + +Q+G + N +G
Sbjct: 116 -IFPDKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTSVIPTNVFG 174
Query: 206 PR--MNIDDGRVVSNFIAQAL----RGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM-EGE 258
NIDDG V+ I + G+PL V G R F Y D+ + ++ E +
Sbjct: 175 AHDNFNIDDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYD 234
Query: 259 NTGPV--NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAK 311
P+ ++G E ++ + A+ V + + G + ++ +T Q K S AK
Sbjct: 235 EVDPIILSVGEEDELSIKDCADAVVDAL--GFKGDVIYDTSKADGQFKKTASNAK 287
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 149 (57.5 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 81/313 (25%), Positives = 132/313 (42%)
Query: 31 RILVTGGAGFIGSHLVDKLMEN--EKNEVIVADNYFTGSK-DNLKKWIGHPRFELIRH-- 85
R L+TG G GS+L + L+ E + +I + F S+ D+L P L H
Sbjct: 3 RALITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHYG 62
Query: 86 ---DVTE--PLL--IEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAK--RV 135
D T LL IE D++Y+LA S + ++ PV T T +G++ +L + RV
Sbjct: 63 DLIDGTRLVTLLSTIEPDEVYNLAAQ-SHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRV 121
Query: 136 GARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQI 195
R S+SE++G P P+ + P RS Y K + +Y +G+
Sbjct: 122 HCRFYQASSSEMFG---ASPPPQN---ELTPFYPRSPYGAAKVYSYWATRNYREAYGLFA 175
Query: 196 RIARIFNTYGPRMNIDD-GRVVSNFIAQALRGEPLTVQKPGTQT-RSFCYVSDMVDGLIR 253
+FN PR R ++ +A+ G V R + Y + V+G+ R
Sbjct: 176 VNGILFNHESPRRGETFVTRKITRAVARIKAGIQSEVYMGNLDAVRDWGYAPEYVEGMWR 235
Query: 254 LMEGENTGPVNIGNPGEFTMLELAETVKELINPGIE----IKMVEN--TPDDPRQRKPDI 307
+++ + + FT+ E A E + G++ +K + P + D
Sbjct: 236 MLQTDEPDDFVLATGRGFTVREFARAAFE--HAGLDWQQYVKFDQRYLRPTEVDSLIGDA 293
Query: 308 SKAKELLGWEPKV 320
+KA ELLGW V
Sbjct: 294 TKAAELLGWRASV 306
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 107 (42.7 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 40/146 (27%), Positives = 72/146 (49%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNY---FTGS---KDNLKK---WIGHP-RF 80
++LVTGGAG+IGSH V +L+E V++ DN+ F G ++L++ G F
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVI-DNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 81 E---LIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 135
E ++ + L + + H A + P+ + N+ GT+ +L + K
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 136 GAR-ILLTSTSEVYGDPLIHPQPETY 160
G + ++ +S++ VYG+P P E +
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH 148
Score = 85 (35.0 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 48/212 (22%), Positives = 88/212 (41%)
Query: 139 ILLTSTSEVYGDPLIHPQPETY--WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
++ +S++ VYG+P P E + G NP G + E + + + D + + +R
Sbjct: 127 LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIE-EMIRDLCQAD-KTWNAVLLR 184
Query: 197 IARIFNTYGPRMNIDDGRVVSN----FIAQALRG--EPLTV------QKPGTQTRSFCYV 244
+ +D + + N +++Q G E L V + GT R + +V
Sbjct: 185 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV 244
Query: 245 SDMVDGLIRLMEG--ENTGP--VNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDP 300
D+ G I + E G N+G +++L++ + +++ I K+V D
Sbjct: 245 VDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDV 304
Query: 301 RQRKPDISKAKELLGWEPKVKLRDGLPLMEED 332
+ S A+E LGW + GL M ED
Sbjct: 305 AACYANPSLAQEELGWTAAL----GLDRMCED 332
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 88/309 (28%), Positives = 130/309 (42%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
RIL+TG GF+G +++ +L+ + +G++ +L+ H R +L
Sbjct: 5 RILITGANGFVGGYMIRELVAAGYQHSELHTLTVSGAEQSLRIGQAH-RCDLRDSASIHR 63
Query: 91 LLIEVDQ--IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLG---LAKRVGARILLTSTS 145
LL EV I HLA A P K +P N + LG LA A ++ +S
Sbjct: 64 LLQEVQPTGIVHLAAIALPSQAKADPSAAWAVN-FEAVRQLGEAVLACSPHAVLVFAGSS 122
Query: 146 EVYGDPLIHPQPETYWGNVNP-IGVRSC--YDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
E YG T G VN +R Y K A+ + R G+ R FN
Sbjct: 123 ESYGASF-----NTVAGAVNEGTALRPLTPYAATKAAADVALGQM-RNDGLNAVRFRAFN 176
Query: 203 TYGPRMNIDDGRVVSNF---IAQALRGEPLTVQKPGT--QTRSFCYVSDMVDGLIRLMEG 257
GP + D VV++F IAQ + G+ V + G R F V D+V G +E
Sbjct: 177 HTGPGQSPD--YVVASFAAQIAQIIAGDHPPVIRVGNLDAMRDFVDVRDVVRGYRLALET 234
Query: 258 ENTGPVNIG--NPGEFTMLELAETVKELIN-PGIEIKMVENTPDDPRQRK-P----DISK 309
E PV+ G N T + + LI+ G++I +E P R+ P D ++
Sbjct: 235 E-LDPVSEGVFNLASGTPRSIRSILNTLIDIAGVDIA-IETDPAKLRKNDVPRTWGDANR 292
Query: 310 AKELLGWEP 318
A+ LGW P
Sbjct: 293 ARTELGWVP 301
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 54/187 (28%), Positives = 84/187 (44%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDN---LKKWIGHP-RFELIRHDV 87
+LVTGGAG+IGSH +L++ E V + DN G+ L++ P R + I D+
Sbjct: 73 VLVTGGAGYIGSHAALRLLK-ESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADL 131
Query: 88 TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 140
+ + D + H A A P+K TL +L G + L
Sbjct: 132 GDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHGVKTL 191
Query: 141 L-TSTSEVYGDPLIHP-QPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIA 198
+ +ST YG+P I P ET +NP Y + K++AE ++ D+ + + + I
Sbjct: 192 IYSSTCATYGEPDIMPITEETPQVPINP------YGKAKKMAEDIILDFSKNSDMAVMIL 245
Query: 199 RIFNTYG 205
R FN G
Sbjct: 246 RYFNVIG 252
>WB|WBGene00019813 [details] [associations]
symbol:ger-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose
reductase activity" evidence=IEA] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 KO:K02377 GO:GO:0050577 OMA:IHCAGRV HSSP:P32055
GeneTree:ENSGT00390000004681 EMBL:FO081121 EMBL:AM231686 PIR:T16645
RefSeq:NP_498540.1 UniGene:Cel.10235 ProteinModelPortal:G5EER4
SMR:G5EER4 EnsemblMetazoa:R01H2.5 GeneID:187512
KEGG:cel:CELE_R01H2.5 CTD:187512 WormBase:R01H2.5 NextBio:935530
Uniprot:G5EER4
Length = 315
Score = 145 (56.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 73/268 (27%), Positives = 115/268 (42%)
Query: 32 ILVTGGAGFIGSHLVDKLMEN-EKNEVIVADNY-FTGSKDNLKKWIGHPR--FELIRHDV 87
ILVTGG G +GS + K++E EK + + + F GSKD + + R FE ++
Sbjct: 4 ILVTGGTGLVGS-AIKKVVETTEKRD---DEKWVFIGSKDCDLENLEETRELFESVKPTH 59
Query: 88 TEPLLIEVDQIYH-LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 146
L V ++H LA F++ N I NV+ + + K V ST
Sbjct: 60 VIHLAAMVGGLFHNLAHNLQ--FFRKN--MAINDNVLALCHEFDVIKCVSC----LSTC- 110
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP 206
++ D +P ET P Y KR+ + L Y ++HG + N +GP
Sbjct: 111 IFPDKTSYPIDETMVHLGPPHDSNFGYSYAKRMIDVLNKGYAQEHGRKYTSVVPCNVFGP 170
Query: 207 R--MNIDDGRVVSNFIAQAL----RGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM-EGEN 259
N+ G V+ I +A G PL V GT R F Y D+ IR++ E E+
Sbjct: 171 HDNYNLQSGHVLPALIHKAYVAQRDGTPLQVYGSGTPLRQFIYSIDLARLFIRVVREYED 230
Query: 260 TGPV--NIGNPGEFTMLELAETVKELIN 285
P+ ++ E ++ + V + I+
Sbjct: 231 VEPIILSVNESDEVSIRDAVSAVVKAID 258
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 128 (50.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 46/153 (30%), Positives = 71/153 (46%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKK--WIGHPRFELIRHDVTE 89
+LVTGG G+IGS L+E +V+VADN + S + L + I + E + DVT+
Sbjct: 6 VLVTGGTGYIGSFTTLALLE-AGYKVVVADNLYNSSAEALNRIELISGKKAEFAQLDVTD 64
Query: 90 PLLIE--------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGARIL 140
+ +D + H A + P+ NV GT+ +L + + I+
Sbjct: 65 EAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVRHNVTNIV 124
Query: 141 LTSTSEVYGD----PLIHPQPETY-WGNVNPIG 168
+S++ VYGD P + P PE G NP G
Sbjct: 125 FSSSATVYGDATRFPDMIPIPEHCPLGPTNPYG 157
Score = 59 (25.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 17/88 (19%), Positives = 36/88 (40%)
Query: 235 GTQTRSFCYVSDMVDGLIRLME---GENTG--PVNIGNPGEFTMLELAETVKELINPGIE 289
GT R + ++ D+ DG ++ + N G N+G T+ E+ + + +
Sbjct: 247 GTAIRDYIHILDLADGHLKALNYLRANNPGVRAWNLGTGRGSTVYEMIRAFSKAVGRDLP 306
Query: 290 IKMVENTPDDPRQRKPDISKAKELLGWE 317
++ D + ++A LGW+
Sbjct: 307 YEVAPRRAGDVLNLTSNPTRANTELGWK 334
>ZFIN|ZDB-GENE-071004-107 [details] [associations]
symbol:zgc:173683 "zgc:173683" species:7955 "Danio
rerio" [GO:0044237 "cellular metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-071004-107 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:BC153420 IPI:IPI00997417
RefSeq:NP_001103317.1 UniGene:Dr.92565 ProteinModelPortal:A8E513
GeneID:100126119 KEGG:dre:100126119 NextBio:20788981 Uniprot:A8E513
Length = 320
Score = 143 (55.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 75/295 (25%), Positives = 124/295 (42%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKD-NLKKWIGHPR--FELIRH 85
MR+LVTGG+G +G ++++++ E E + + F SK+ NL R FE R
Sbjct: 8 MRVLVTGGSGLVG-RAIERVVKEEGRE---GEEWTFLSSKEANLLS-AKETRAIFEKYRP 62
Query: 86 DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 145
L V ++ + F++ N I NV+ T N G+ K V ST
Sbjct: 63 THVIHLAAMVGGLFR-NMRQNLDFWRNNVF--INDNVLQTANEFGVVKVVSC----LSTC 115
Query: 146 EVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYG 205
++ D +P ET N P Y KR+ + +Q+G + N +G
Sbjct: 116 -IFPDKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAVIPTNVFG 174
Query: 206 PR--MNIDDGRVVSNFIAQAL----RGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM-EGE 258
NI+DG V+ I + G+PL V G R F Y D+ + ++ E +
Sbjct: 175 AHDNFNIEDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYD 234
Query: 259 NTGPV--NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAK 311
P+ ++G E ++ + A+ V + + G ++ +T Q K S AK
Sbjct: 235 EVDPIILSVGEEDELSIKDCADAVVDAL--GFNGDVIYDTSKADGQFKKTASNAK 287
>UNIPROTKB|P0A5D1 [details] [associations]
symbol:MT0522 "Uncharacterized protein Rv0501/MT0522"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
GO:GO:0005886 GO:GO:0005576 GO:GO:0003824 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BX842573
GO:GO:0044237 KO:K01784 KEGG:mtu:Rv3634c PIR:C70546 PIR:H70745
RefSeq:NP_215050.2 RefSeq:NP_334931.1 RefSeq:YP_006513834.1
ProteinModelPortal:P0A5D1 SMR:P0A5D1 PRIDE:P0A5D1
EnsemblBacteria:EBMYCT00000002993 EnsemblBacteria:EBMYCT00000072795
GeneID:13318375 GeneID:887228 GeneID:923918 KEGG:mtc:MT0522
KEGG:mtu:Rv0501 KEGG:mtv:RVBD_0501 PATRIC:18122858
TubercuList:Rv0501 HOGENOM:HOG000053265 OMA:EVEGYVR
ProtClustDB:CLSK881171 Uniprot:P0A5D1
Length = 376
Score = 144 (55.7 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 66/264 (25%), Positives = 115/264 (43%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPL 91
+LVTG F+G +L +L +N ++A + SKD L++ +G R E +R D+ P
Sbjct: 26 VLVTGACRFLGGYLTARLAQNPLINRVIAVDAIAPSKDMLRR-MG--RAEFVRADIRNPF 82
Query: 92 LI------EVDQIYHLACPA-SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLT 142
+ EVD + H A + +P +K + NV+G + + ++ + R++L
Sbjct: 83 IAKVIRNGEVDTVVHAAAASYAPRSGGSAALKEL--NVMGAMQLFAACQKAPSVRRVVLK 140
Query: 143 STSEVYG----DPLIHPQPETYWGNVNPIGVRSCYD-EGKRVAETLMFDYHRQHGIQIRI 197
STSEVYG DP++ + + + + D EG L R+ I + I
Sbjct: 141 STSEVYGSSPHDPVMFTEDSSSRRPFSQGFPKDSLDIEG--YVRALG---RRRPDIAVTI 195
Query: 198 ARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEG 257
R+ N GP M+ R ++ + + G +Q + D + L R
Sbjct: 196 LRLANMIGPAMDTTLSRYLAGPLVPTIFGRDARLQ--------LLHEQDALGALERAAMA 247
Query: 258 ENTGPVNIGNPGEFTMLELAETVK 281
G NIG G +L L++ ++
Sbjct: 248 GKAGTFNIGADG---ILMLSQAIR 268
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 127 (49.8 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 55/166 (33%), Positives = 79/166 (47%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKN--EVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
LVTGG GF+G H+V L++ E E+ V D + + LK G R I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT--GPVRVTAIQGDVTQA 70
Query: 91 -----LLIEVDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGARILL-TS 143
+ + H A +F + +P KTI + NV GT N++ + G R L+ TS
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGRASP-KTIHEVNVQGTRNVIEACVQTGTRFLVYTS 128
Query: 144 TSEVYGDPLIHPQPETYWGNVN-PIGV--RSCYDEGKRVAETLMFD 186
+ EV G P P Y GN + P R Y K +AE L+ +
Sbjct: 129 SMEVVG-PNTKGHP-FYRGNEDTPYEAVHRHPYPCSKALAEWLVLE 172
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 141 (54.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 84/322 (26%), Positives = 133/322 (41%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKNEVI-------VADN-YFTGSKDNLKKWIGHPRFELIR 84
L+TG G +GS + D L+ N EVI DN Y + N K I +L
Sbjct: 6 LITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 65
Query: 85 HDVTEPLLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR---- 138
+ + L D I+HLA + P P++T++TN+IGT N+L + + A+
Sbjct: 66 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKDGYD 125
Query: 139 --ILLTSTSEVYGDPL--IHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQ 194
+ + S+SEVYG I +T + +P Y K + L Y + I+
Sbjct: 126 PVVHVCSSSEVYGRAKVGIKLNEDTTFHGASP------YSISKIGTDYLGRFYGEAYNIR 179
Query: 195 IRIARIFNTYGPRMN-IDDGRVVSNFIAQALRGEPLTVQKPG--TQTRSFCYVSDMVDGL 251
+ R+ GPR + + V+ IA G V K G + R+F D +
Sbjct: 180 TFVTRMGTHSGPRRSDVFFESTVAKQIALIETGYQEPVIKVGNLSSVRTFQDARDAIRAY 239
Query: 252 IRLMEGENTGPVNIGNP----GEFTMLELAETVKELIN----PGIEIKMVENT--PDDPR 301
L G V G GE +L E ++ L++ I+I+ E P D
Sbjct: 240 YLLSLESQKGKVPCGEAFNIAGE-EAFKLPEVIEILLSFSTRKDIKIEQDEERLRPIDAD 298
Query: 302 QRKPDISKAKELLGWEPKVKLR 323
+ D +K K + W+P++ R
Sbjct: 299 YQMFDNTKIKSFINWKPEIAAR 320
>UNIPROTKB|F1NYB5 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0019673
GO:GO:0050577 GeneTree:ENSGT00390000004681 OMA:ASVHVMN
GO:GO:0042350 EMBL:AADN02037342 IPI:IPI00585390
Ensembl:ENSGALT00000025982 Uniprot:F1NYB5
Length = 260
Score = 138 (53.6 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 58/225 (25%), Positives = 93/225 (41%)
Query: 98 IYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE-VYGDPLIHP 155
+ HLA +F + + N+ N+L A G + +++ S ++ D +P
Sbjct: 5 VIHLAAMVGGLFKNIRCNLDFWRRNIHINDNVLHSAYECGVQKVVSCLSTCIFPDKTTYP 64
Query: 156 QPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPR--MNIDDG 213
ET N P Y KR+ + Y QHG + N +GP NI+DG
Sbjct: 65 IDETMIHNGPPHSSNFGYSYAKRMIDVQNRGYFEQHGCRFTAVIPTNVFGPHDNFNIEDG 124
Query: 214 RVVSNFIAQAL----RGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM-EGENTGPV--NIG 266
V+ I + G LTV G R F Y D+ + ++ E E P+ ++G
Sbjct: 125 HVLPGLIHKVYLAKQNGSALTVWGTGKPRRQFIYSLDLARLFVWVLREYEEVEPIILSVG 184
Query: 267 NPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAK 311
E ++ E AE + E ++ E+ + + T D Q K S AK
Sbjct: 185 EEDEVSIREAAEAIVEAMDFRGEL-IFDTTKADG-QFKKTASNAK 227
>ZFIN|ZDB-GENE-050417-317 [details] [associations]
symbol:zgc:110348 "zgc:110348" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 ZFIN:ZDB-GENE-050417-317
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168011 GeneTree:ENSGT00390000004681
HOVERGEN:HBG000059 OMA:KNTHINI EMBL:BX663521 IPI:IPI00851573
Ensembl:ENSDART00000100262 Uniprot:B0S7C9
Length = 354
Score = 141 (54.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 74/295 (25%), Positives = 124/295 (42%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKD-NLKKWIGHPR--FELIRH 85
MR+LVTGG+G +G ++++++ E + + F SK+ NL R FE R
Sbjct: 42 MRVLVTGGSGLVG-RAIERVVKEEGRG---GEEWTFLSSKEANLLS-AKETRAIFEKYRP 96
Query: 86 DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 145
L V ++ + F++ N I NV+ T N G+ K V ST
Sbjct: 97 THVIHLAAMVGGLFR-NMRQNLDFWRNNVF--INDNVLQTANEFGVVKVVSC----LSTC 149
Query: 146 EVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYG 205
++ D +P ET N P Y KR+ + +Q+G + + N +G
Sbjct: 150 -IFPDKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAGILTNVFG 208
Query: 206 PR--MNIDDGRVVSNFIAQAL----RGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM-EGE 258
NI+DG V+ I + G+PL V G R F Y D+ + ++ E +
Sbjct: 209 AHDNFNIEDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYD 268
Query: 259 NTGPV--NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAK 311
P+ ++G E ++ + A+ V + + G ++ +T Q K S AK
Sbjct: 269 EVDPIILSVGEEDELSIKDCADAVVDAL--GFNGDVIYDTSKADGQFKKTASNAK 321
>UNIPROTKB|Q4K8G6 [details] [associations]
symbol:PFL_4375 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0044237
HOGENOM:HOG000218208 RefSeq:YP_261467.1 ProteinModelPortal:Q4K8G6
STRING:Q4K8G6 GeneID:3478498 KEGG:pfl:PFL_4375 PATRIC:19878178
OMA:VFGAPFP ProtClustDB:CLSK2301589
BioCyc:PFLU220664:GIX8-4410-MONOMER Uniprot:Q4K8G6
Length = 324
Score = 140 (54.3 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 72/295 (24%), Positives = 131/295 (44%)
Query: 30 MRILVTGGAGFIGSHLVDKLMEN----EKNEVIVADNYFTGSKDNLKKWIGHPRFELIRH 85
M ILVTG AGF+G L+ L+E +++ + T + + + PR ++
Sbjct: 1 MNILVTGAAGFLGRRLIQALLERGSLTDRHGQLHPIQRITAFDRDPVQGLDDPRVQVKGG 60
Query: 86 DVTEPLLIE--VDQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-- 137
D+T+P ++ +D I+HLA S + ++ N T +L A+++G
Sbjct: 61 DITDPQVLANLIDANTQGIFHLAAVVSSQAESDFDLG-MRVNFSATQGLLERARQLGTCP 119
Query: 138 RILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIQ 194
+ ++TS+ V+G L P+T G+ +S Y K + + L+ DY R+ G
Sbjct: 120 KWVMTSSVAVFGGQL----PDTV-GDDQVWSPQSSYGTQKAMNDLLLADYSRRGFVDGRS 174
Query: 195 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCY-----VSDMVD 249
+R+ I G + N+ S I + L G+ P TR + ++++V
Sbjct: 175 LRMPTIVVRPG-KPNLAASSFASGIIREPLNGQASVCPVP-LNTRLWLMSPAQAIANLVH 232
Query: 250 GLIRLMEGENTGPVNIGNPG-EFTMLELAETVKELINPGIEIKMVENTPDDPRQR 303
G E N G V I PG T+ ++ + ++E+ + + V+ PD +R
Sbjct: 233 GHELAAERLNQGRV-INMPGLSQTVEQMIDALREVAGDAVA-RQVQLRPDAAIER 285
>MGI|MGI:2141879 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3
beta- and steroid delta-isomerase 7" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol
3-beta-dehydrogenase activity" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:2141879
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270
KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0047016 GO:GO:0001558
EMBL:AF277718 EMBL:BC132605 EMBL:BC138589 IPI:IPI00111009
RefSeq:NP_598704.2 UniGene:Mm.486340 ProteinModelPortal:Q9EQC1
SMR:Q9EQC1 STRING:Q9EQC1 PhosphoSite:Q9EQC1 PaxDb:Q9EQC1
PRIDE:Q9EQC1 Ensembl:ENSMUST00000046863 GeneID:101502
KEGG:mmu:101502 UCSC:uc009jwu.1 InParanoid:A2RTR5 ChiTaRS:HSD3B7
NextBio:354976 Bgee:Q9EQC1 Genevestigator:Q9EQC1
GermOnline:ENSMUSG00000042289 Uniprot:Q9EQC1
Length = 369
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 70/229 (30%), Positives = 106/229 (46%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKN--EVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
LVTGG GF+G H+V L+E E E+ V D + + + LK G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEREPRLRELRVFDLHLSSWLEELKA--GPVQVTAIQGDVTQA 70
Query: 91 LLIEVDQ-----IYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGARILL-TS 143
+ + H A +F K +P KTI K NV GT N++ + G + L+ TS
Sbjct: 71 HEVAAAMSGSHVVIHTAGLVD-VFGKASP-KTIHKVNVQGTQNVIDACVQTGTQYLVYTS 128
Query: 144 TSEVYGDPLIHPQPETYWGNVN-PI-GVRSC-YDEGKRVAETLMFDYHRQHGIQIRIARI 200
+ EV G P I P Y GN + P V S Y K +AE L+ + + + + + +
Sbjct: 129 SMEVVG-PNIKGHP-FYRGNEDTPYEAVHSHPYPCSKALAEQLVLEANGRK-VNGGLPLV 185
Query: 201 FNTYGPRMNIDDG-RVVSNFIAQALR-GEPLTVQKPGTQTRSFCYVSDM 247
P +G +V+ +F Q LR G L P + YV ++
Sbjct: 186 TCALRPTGIYGEGHQVMRDFYYQGLRFGGRLFRAVPASVEHGRVYVGNV 234
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 110 (43.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 54/202 (26%), Positives = 92/202 (45%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADN----YFTGSK--DNLKKW--IGHPRFELI 83
+LVTGGAG+IGSH V +++ N VI DN Y +G+K + L + I +
Sbjct: 6 VLVTGGAGYIGSHTVLEML-NAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFY 64
Query: 84 RHDVTEPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRV 135
R D+T+ + ++D + H A + P++ N+ GT +L +A
Sbjct: 65 RVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNN 124
Query: 136 GARILLTSTSEVYGDPLIHPQPETYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIQ 194
+ + +S++ VYG+P P E + P G S Y + K E ++ D +
Sbjct: 125 VFKFVYSSSATVYGEPKFLPVTEEH-----PTGNCTSPYGKTKYFTEEILKDLCKSDKRW 179
Query: 195 IRIA-RIFNTYGPRMNIDDGRV 215
++ R FN G ++ GR+
Sbjct: 180 AVVSLRYFNPVGAHIS---GRI 198
Score = 69 (29.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 22/104 (21%), Positives = 46/104 (44%)
Query: 235 GTQTRSFCYVSDMVDGLIRLMEG----ENTG--PVNIGNPGEFTMLELAETVKELINPGI 288
GT R + ++ D+ +G ++ ++ TG N+G +++L++ + ++ +
Sbjct: 236 GTGVRDYIHIVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKV 295
Query: 289 EIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEED 332
+V+ D D + A + LGW K G+ M ED
Sbjct: 296 NYTLVDRRSGDVATCYADATLADKKLGW----KAERGIDKMCED 335
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 125 (49.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 57/192 (29%), Positives = 88/192 (45%)
Query: 31 RILVTGGAGFIGSHLVDKLMEN--EKNEVIVADNYF-TGSKDNLKKWIGHPRFELIRH-- 85
R L+TG +G GS+L + L+ E + VI + F TG D+L + P L H
Sbjct: 3 RALITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVRLFLHYG 62
Query: 86 DVTEP-----LLIEV--DQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVG- 136
D+ + +L EV D+IY+L S + ++ P T + + +GT+ +L + G
Sbjct: 63 DLNDASSINRVLREVRPDEIYNLGAQ-SHVRVSFDVPEYTGEIDALGTVRLLEGIRETGL 121
Query: 137 -ARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQI 195
R S+SE+YG + PQ ET P RS Y K A + +Y +G+
Sbjct: 122 NTRFYQASSSELYGKVVETPQKET-----TPFYPRSPYACAKAYAYYITVNYRESYGMYA 176
Query: 196 RIARIFNTYGPR 207
+FN PR
Sbjct: 177 CNGILFNHESPR 188
Score = 52 (23.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 306 DISKAKELLGWEPKVKLRDGLPLMEE 331
D +KA+ LGW+P+V + + +M +
Sbjct: 310 DPAKARRQLGWQPRVDFQGLVDMMTD 335
>UNIPROTKB|Q3MHF2 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016853 "isomerase activity" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
CTD:80270 KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0016853
EMBL:DAAA02057919 EMBL:BC105259 EMBL:BT030700 IPI:IPI00692623
RefSeq:NP_001029868.1 UniGene:Bt.7734 STRING:Q3MHF2
Ensembl:ENSBTAT00000003028 GeneID:540229 KEGG:bta:540229
InParanoid:Q3MHF2 NextBio:20878503 Uniprot:Q3MHF2
Length = 368
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 54/165 (32%), Positives = 78/165 (47%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKN--EVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
LVTGG GF+G H+V L++ E E+ + D + + LK G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLRELRIFDLHLGPWLEELKT--GPVQVTAIQGDVTQA 70
Query: 91 -----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TST 144
+ + H A +F K +P + NV GT N++ + G R L+ TS+
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGKTSPETIHEVNVQGTQNVIEACVQTGTRFLIYTSS 129
Query: 145 SEVYGDPLIHPQPETYWGNVN-PIGV--RSCYDEGKRVAETLMFD 186
EV G P I QP Y GN N P R Y K +AE L+ +
Sbjct: 130 MEVVG-PNIKGQP-FYRGNENTPYEAVHRHPYPCSKALAEQLVLE 172
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 119 (46.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 58/227 (25%), Positives = 94/227 (41%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKNEVIVADN----YFTGSKDN--LKKWIGHPRFELIRHD 86
+VTGG GF HLV+ L+ E V +AD + N L + + R + I D
Sbjct: 13 VVTGGRGFAARHLVEMLVRYEMFCVRIADLAPAIMLDPQEGNGVLDEGLRSGRVQYISAD 72
Query: 87 VTEPL-LIEVDQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 140
+ + +++ Q ++H+A P S I N NV GT N++ VG R++
Sbjct: 73 LRDKSQVVKAFQGAEVVFHMAAPDSSI---NNHQLQYSVNVQGTQNVIDACVDVGVKRLI 129
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
TS+ V D +H PI Y K E L+ + ++G+ R
Sbjct: 130 YTSSPSVVFDG-VHGILNGTESMAYPIKHNDSYSATKAEGEELIMKANGRNGLLTCCIRP 188
Query: 201 FNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDM 247
+ +GP D +V + +A A G+ + G F YV ++
Sbjct: 189 SSIFGP----GDRLLVPSLVAAARAGKSKFIIGDGNNLYDFTYVENV 231
Score = 63 (27.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 243 YVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVK---ELINP-GIEIKMVENTPD 298
++S ++DGL G + I P F M+ +A V+ +++ P G+ + + TP
Sbjct: 270 FMSQLLDGL-----GYERPSIKI--PA-FIMMPIAHLVELTYKVLGPYGMTVPQL--TPS 319
Query: 299 DPR----QRKPDISKAKELLGWEPKVKLRDGL 326
R R D +KAK+ LG+ P V L++G+
Sbjct: 320 RVRLLSCSRTFDSTKAKDRLGYAPVVPLQEGI 351
>SGD|S000002969 [details] [associations]
symbol:ERG26 "C-3 sterol dehydrogenase" species:4932
"Saccharomyces cerevisiae" [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0008202 "steroid metabolic process" evidence=IEA] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000252 "C-3 sterol dehydrogenase (C-4
sterol decarboxylase) activity" evidence=IDA] UniPathway:UPA00770
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 SGD:S000002969
EMBL:BK006941 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0006696 KO:K07748
OrthoDB:EOG4DNJD4 GO:GO:0000252 GO:GO:0047012 EMBL:Z72523
EMBL:AY693026 PIR:S64003 RefSeq:NP_011514.1
ProteinModelPortal:P53199 SMR:P53199 DIP:DIP-6786N IntAct:P53199
MINT:MINT-666123 STRING:P53199 PaxDb:P53199 PeptideAtlas:P53199
EnsemblFungi:YGL001C GeneID:852883 KEGG:sce:YGL001C CYGD:YGL001c
BioCyc:MetaCyc:YGL001C-MONOMER NextBio:972532 Genevestigator:P53199
GermOnline:YGL001C Uniprot:P53199
Length = 349
Score = 116 (45.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 32 ILVTGGAGFIGSHLVDKLME-NEKNEVIVAD---------NYFTGSKDNLKKWIGHPRFE 81
+L+ GG+GF+G HL+ + + N K ++ + D FT + D++K G +
Sbjct: 7 VLIIGGSGFLGLHLIQQFFDINPKPDIHIFDVRDLPEKLSKQFTFNVDDIKFHKG----D 62
Query: 82 LIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL 141
L D E + E + C ASP+ + NP NV GT N++ + K+ G IL+
Sbjct: 63 LTSPDDMENAINESKANVVVHC-ASPM-HGQNPDIYDIVNVKGTRNVIDMCKKCGVNILV 120
Query: 142 TSTSE--VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLM 184
++S ++ +H ET W P Y+E K +AE ++
Sbjct: 121 YTSSAGVIFNGQDVHNADET-WPI--PEVPMDAYNETKAIAEDMV 162
Score = 60 (26.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 303 RKPDISKAKELLGWEPKVKLRDGL 326
R +I+KAK+LLG+ P+V + +G+
Sbjct: 315 RYHNIAKAKKLLGYTPRVGIEEGI 338
>TAIR|locus:2203771 [details] [associations]
symbol:3BETAHSD/D1
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISS] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IGI;IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0019745 "pentacyclic triterpenoid biosynthetic
process" evidence=RCA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 PROSITE:PS50845 InterPro:IPR016040 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC015449
KO:K07748 GO:GO:0047012 EMBL:AY957470 EMBL:AK117478 EMBL:BT005166
EMBL:AY085272 IPI:IPI00543327 IPI:IPI00545978 PIR:F96513
RefSeq:NP_564502.1 RefSeq:NP_849779.1 UniGene:At.38654
ProteinModelPortal:Q9FX01 SMR:Q9FX01 IntAct:Q9FX01 PaxDb:Q9FX01
PRIDE:Q9FX01 EnsemblPlants:AT1G47290.2 GeneID:841132
KEGG:ath:AT1G47290 TAIR:At1g47290 InParanoid:Q9FX01 OMA:YLVELAY
PhylomeDB:Q9FX01 ProtClustDB:CLSN2688501 Genevestigator:Q9FX01
Uniprot:Q9FX01
Length = 439
Score = 108 (43.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 54/228 (23%), Positives = 90/228 (39%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKNEVIVADN----YFTGSKDN--LKKWIGHPRFELIRHD 86
+VTGG GF HLV+ L+ + V +AD ++ L + I R + + D
Sbjct: 13 VVTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGILGEAIRSGRVQYVSAD 72
Query: 87 VTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 140
+ + + ++H+A P S I N NV GT N++ VG R++
Sbjct: 73 LRNKTQVVKGFQGAEVVFHMAAPDSSI---NNHQLQYSVNVQGTTNVIDACIEVGVKRLI 129
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
TS+ V D +H P Y K E L+ + + G+ R
Sbjct: 130 YTSSPSVVFDG-VHGTLNADESLPYPPKHNDSYSATKAEGEALILKANGRSGLLTCCIRP 188
Query: 201 FNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMV 248
+ +GP D +V + + A G+ + G+ F YV ++V
Sbjct: 189 SSIFGP----GDKLMVPSLVTAARAGKSKFIIGDGSNFYDFTYVENVV 232
Score = 72 (30.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 27/88 (30%), Positives = 43/88 (48%)
Query: 253 RLMEGENTGPVNIGNPGEFTM--LELAETVKELINP-GIEIKMVENTPDDPR----QRKP 305
+L+EG +I P M L E +L+ P G+++ ++ TP R R
Sbjct: 273 QLLEGLGYERPSIKIPASLMMPIAYLVELAYKLLGPYGMKVPVL--TPSRVRLLSCNRTF 330
Query: 306 DISKAKELLGWEPKVKLRDGLPLMEEDF 333
D SKAK+ LG+ P V L++G+ + F
Sbjct: 331 DSSKAKDRLGYSPVVPLQEGIKRTIDSF 358
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 98 (39.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 48/194 (24%), Positives = 81/194 (41%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFT--------GSKDNLK-------KW 74
M ILVTG AGFIGSH V +L+ N V+ DN+ G+ +LK K
Sbjct: 1 MHILVTGAAGFIGSHTVLELL-NSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKD 59
Query: 75 IGHPRFELIRHDVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA 132
+ ++ E + E D I HLA + P++ N++ +LN++ +
Sbjct: 60 VPFQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMC 119
Query: 133 KRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 192
+ + + S+S P P T G+ + Y + K + E ++ D + +
Sbjct: 120 LKYNVKNFVFSSSATVYGPPSE-LPITEKSQTGQ-GITNPYGQTKYMMEQILIDVGKANP 177
Query: 193 I-QIRIARIFNTYG 205
+ + R FN G
Sbjct: 178 EWNVVLLRYFNPVG 191
Score = 79 (32.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 235 GTQTRSFCYVSDMVDGLIRLMEGENT-GPV-----NIGNPGEFTMLELAETVKELINPGI 288
GT R + +V D+ G ++ + T G + N+G +++ ++ + +K++ I
Sbjct: 236 GTGVRDYIHVVDLAKGHVKAFDRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKKVSGRDI 295
Query: 289 EIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRD 324
+K+ P D D S A+E LGW + L +
Sbjct: 296 PVKIGVPRPGDVASVYCDPSLAQEKLGWRAETGLEE 331
>WB|WBGene00012394 [details] [associations]
symbol:hsd-1 species:6239 "Caenorhabditis elegans"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;IMP] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0006694 "steroid biosynthetic
process" evidence=IEA] [GO:0016616 "oxidoreductase activity, acting
on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IGI] [GO:0016126 "sterol biosynthetic process"
evidence=IMP] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0002119 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0016126
EMBL:AL032655 PIR:T27323 RefSeq:NP_493402.1 UniGene:Cel.28002
ProteinModelPortal:Q9XWF0 EnsemblMetazoa:Y6B3B.11 GeneID:189371
KEGG:cel:CELE_Y6B3B.11 UCSC:Y6B3B.11 CTD:189371 WormBase:Y6B3B.11
HOGENOM:HOG000020706 InParanoid:Q9XWF0 OMA:VLRFNGI NextBio:942172
Uniprot:Q9XWF0
Length = 462
Score = 110 (43.8 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 43/167 (25%), Positives = 74/167 (44%)
Query: 92 LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVY-- 148
L +VD +YHLA Y + + N +GT+N+L A+ G R + TS+ V
Sbjct: 140 LEQVDTVYHLAAVGMTGQYARDRKACMDINAVGTMNLLIWARNSGVQRFIYTSSVGVVFS 199
Query: 149 GDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRM 208
G+P+ + E + P + Y E K AE ++ H ++ + R YGP
Sbjct: 200 GEPMYNATEEVGY----PDDFYNYYCESKAHAERIV-QKASGHRMRTTVLRFNGIYGP-- 252
Query: 209 NIDDGRVVSNFIAQALRGEPLTVQKP-GTQTRS-FCYVSDMVDGLIR 253
+ RV + L G + KP G + ++ V++ + GL++
Sbjct: 253 --GEKRVTERVVKFMLTGMWIATCKPNGVEAQTQLSSVANCIQGLVK 297
Score = 62 (26.9 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEV 57
++L+TGGAG + +LV KL E ++ +
Sbjct: 46 KVLITGGAGHLAENLVAKLEEMTRDSI 72
Score = 43 (20.2 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 306 DISKAKELLGWEPKVKLRDGLPLMEEDFRSRL 337
+I KA+ LG+EP V +P + E + RL
Sbjct: 383 NIEKAERDLGYEPSVS---AIPEIIEHYLHRL 411
>UNIPROTKB|F1S2D0 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0008203 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224
EMBL:CU468868 Ensembl:ENSSSCT00000013948 Uniprot:F1S2D0
Length = 361
Score = 124 (48.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 61/233 (26%), Positives = 98/233 (42%)
Query: 34 VTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLI 93
V GG+GF+G H+V++L+E V V D ++ ++G +L P L
Sbjct: 30 VIGGSGFLGQHMVEQLLERGY-AVNVFDKRQGFDNPRVQFFLG----DLCNQQDLYPALK 84
Query: 94 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL 152
V ++H A PA N + N IGT N++ + G +++LTS++ V + +
Sbjct: 85 GVSTVFHCASPAPS---SNNKELFYRVNYIGTKNVIETCREAGVQKLILTSSASVIFEGV 141
Query: 153 -IHPQPETYWGNVNPIGVRSCYDEGKRVAE-TLMFDYHRQHGIQIRIARIFNTYGPRMNI 210
I E + PI Y E K + E T++ R +GPR
Sbjct: 142 DIKNGTEDLPYAMKPIDY---YTETKILQEKTVLGANDPDKNFLTTAIRPHGIFGPR--- 195
Query: 211 DDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME--GENTG 261
D ++V I A +G+ V G F +V ++V G I E +TG
Sbjct: 196 -DPQLVPILIEAARKGKMKFVIGNGKNLVDFTFVENVVHGHILAAERLSRDTG 247
Score = 50 (22.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 309 KAKELLGWEPKVKLRDGLPLMEEDF 333
KAK+LLG++P V + D + + F
Sbjct: 330 KAKKLLGYQPLVTMDDAVERTVQSF 354
>UNIPROTKB|Q3ZBE9 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9913 "Bos taurus" [GO:0060716
"labyrinthine layer blood vessel development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0006695 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224 KO:K07748
GO:GO:0047012 EMBL:BC103389 IPI:IPI00716133 RefSeq:NP_001030559.1
UniGene:Bt.49296 ProteinModelPortal:Q3ZBE9 STRING:Q3ZBE9
PRIDE:Q3ZBE9 Ensembl:ENSBTAT00000012167 GeneID:616694
KEGG:bta:616694 CTD:50814 HOVERGEN:HBG054675 InParanoid:Q3ZBE9
OrthoDB:EOG4NKBVW NextBio:20900265 Uniprot:Q3ZBE9
Length = 356
Score = 127 (49.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 62/234 (26%), Positives = 99/234 (42%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE- 89
R V GG GF+G H+V++L+ A N F ++++ +PR + D+
Sbjct: 22 RCTVIGGCGFLGQHMVEQLLARG-----YAVNVF-----DIRQGFDNPRVQFFLGDLCSQ 71
Query: 90 ----PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 144
P L V ++H C ASP + N + N IGT N++ K G +++LTS+
Sbjct: 72 QDLYPALKGVSTVFH--C-ASPPPFNNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSS 128
Query: 145 SEVYGDPL-IHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIA-RIFN 202
+ V + + I E PI Y E K + E + H + A R
Sbjct: 129 ASVIFEGVDIKNGTEDLPYATKPIDY---YTETKILQERAVLGAHDPEKNFLTTAIRPHG 185
Query: 203 TYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
+GPR D ++V I A +G+ + G F +V ++V G I E
Sbjct: 186 IFGPR----DPQLVPILIEAAKKGKMKFMIGNGKNLVDFTFVENVVHGHILAAE 235
Score = 44 (20.5 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 309 KAKELLGWEPKVKLRDGL 326
KAK+L+G+ P V + D +
Sbjct: 325 KAKKLMGYRPLVTMDDAV 342
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 124 (48.7 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 50/158 (31%), Positives = 77/158 (48%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKD---NLKKWIGHPRFELIRHDVT 88
+LVTGGAG+IGSH L+E + +V++ DN + ++K G ++I H V
Sbjct: 9 VLVTGGAGYIGSHTCVVLLE-KGYDVVIVDNLCNSRVEAVHRIEKLTGK---KVIFHQVD 64
Query: 89 ---EPLLIEV--DQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR- 138
EP L +V +Q + H A + P+ K N+ GT+N++ K+ R
Sbjct: 65 LLDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRD 124
Query: 139 ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEG 176
+ +S++ VYGDP +P G PI SC EG
Sbjct: 125 FVFSSSATVYGDPT---RP----GGTIPIP-ESCPREG 154
Score = 47 (21.6 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 15/88 (17%), Positives = 36/88 (40%)
Query: 235 GTQTRSFCYVSDMVDGLIRLMEG-----ENTGPVNIGNPGEFTMLELAETVKELINPGIE 289
GT R + +V D+ + + ++ + P N+G+ T+ ++ + + +
Sbjct: 236 GTPIRDYIHVCDLAEAHVAALDYLRQHFVSCRPWNLGSGTGSTVFQVLNAFSKAVGRDLP 295
Query: 290 IKMVENTPDDPRQRKPDISKAKELLGWE 317
K+ D + ++A E L W+
Sbjct: 296 YKVTPRRAGDVVNLTANPTRANEELKWK 323
>ZFIN|ZDB-GENE-040722-1 [details] [associations]
symbol:tsta3 "tissue specific transplantation antigen
P35B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-040722-1 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 GeneTree:ENSGT00390000004681 CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:AL929003 OMA:IRETCEW EMBL:BC086741
IPI:IPI00509474 RefSeq:NP_001008620.1 UniGene:Dr.83537
STRING:Q5SPD5 Ensembl:ENSDART00000057980 GeneID:494077
KEGG:dre:494077 InParanoid:Q5SPD5 NextBio:20865585 Uniprot:Q5SPD5
Length = 318
Score = 130 (50.8 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 70/294 (23%), Positives = 119/294 (40%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKD-NLKKWIGHPRFELIRHDVT 88
MR+LVTGG+G +G + + E E E + F SKD NL + +H T
Sbjct: 5 MRVLVTGGSGLVGRAIERVVKEGEGREG--EEWIFLSSKDANLLS-PEETKAVFEKHRPT 61
Query: 89 EPLLIEVDQIYHLACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 146
+ HLA +F + ++NV N+L A G +++ ++
Sbjct: 62 H--------VIHLAAMVGGLFRNMRQNLDFWRSNVFINDNVLQAAHDSGVVKVVSCLSTC 113
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYG- 205
++ D +P ET N P Y KR+ + + +Q + N +G
Sbjct: 114 IFPDKTTYPIDETMIHNGPPHESNFGYAYAKRMIDVQNRAFFQQFNRRYTAVIPTNVFGC 173
Query: 206 -PRMNIDDGRVVSNFIAQAL----RGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM-EGEN 259
NI+DG V+ I + G+PL V G R F Y D+ + ++ E +
Sbjct: 174 HDNFNIEDGHVLPGLIHKTYIAKKEGKPLVVWGSGRPLRQFIYSLDLARLFVWVLREYDE 233
Query: 260 TGPV--NIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAK 311
P+ ++G E ++ + A+ V E + ++ + +T Q K S AK
Sbjct: 234 VEPIILSVGEEDELSIKDAADAVVEALEFTGDV--IYDTSKADGQFKKTASNAK 285
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 114 (45.2 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 53/191 (27%), Positives = 86/191 (45%)
Query: 33 LVTGGAGFIGSHLVDKLMEN--EKNEVIV-ADNYFTGSKDNLKK--WIGHPRFELIRHDV 87
L+TG G GS+L + L+E E + + A ++ T D++ + +P+F L D+
Sbjct: 6 LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 65
Query: 88 TEP-----LLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---- 136
++ +L EV D++Y+L + +P T + +GTL +L + +G
Sbjct: 66 SDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKK 125
Query: 137 ARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
R STSE+YG PQ ET P RS Y K A + +Y +G+
Sbjct: 126 TRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGMYAC 180
Query: 197 IARIFNTYGPR 207
+FN PR
Sbjct: 181 NGILFNHESPR 191
Score = 58 (25.5 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 306 DISKAKELLGWEPKVKLRD 324
D +KA E LGW+P++ LR+
Sbjct: 323 DPTKAHEKLGWKPEITLRE 341
>MGI|MGI:1099438 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005811 "lipid particle" evidence=ISO]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IGI] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0060716
"labyrinthine layer blood vessel development" evidence=IMP]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 MGI:MGI:1099438 GO:GO:0005783 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0005811
GO:GO:0008203 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:AL021127 KO:K07748 GO:GO:0047012 CTD:50814
HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:AF100198 IPI:IPI00128692
RefSeq:NP_035071.3 UniGene:Mm.38792 ProteinModelPortal:Q9R1J0
SMR:Q9R1J0 STRING:Q9R1J0 PhosphoSite:Q9R1J0 PaxDb:Q9R1J0
PRIDE:Q9R1J0 Ensembl:ENSMUST00000033715 GeneID:18194 KEGG:mmu:18194
InParanoid:Q9R1J0 ChiTaRS:NSDHL NextBio:293544 Bgee:Q9R1J0
CleanEx:MM_NSDHL Genevestigator:Q9R1J0
GermOnline:ENSMUSG00000031349 Uniprot:Q9R1J0
Length = 362
Score = 129 (50.5 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 61/227 (26%), Positives = 102/227 (44%)
Query: 34 VTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLI 93
V GG+GF+G H+V++L+E V V D + ++ +IG +L P L
Sbjct: 31 VIGGSGFLGQHMVEQLLERGYT-VNVFDIHQGFDNPRVQFFIG----DLCNQQDLYPALK 85
Query: 94 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL 152
V ++H C ASP Y N + N IGT ++ + G +++LTS++ V + +
Sbjct: 86 GVSTVFH--C-ASPPPYSNNKELFYRVNFIGTKTVIETCREAGVQKLILTSSASVVFEGV 142
Query: 153 -IHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYH--RQHGIQIRIARIFNTYGPRMN 209
I E + PI Y E K + E + D + +++ + I R +GPR
Sbjct: 143 DIKNGTEDLPYAMKPIDY---YTETKILQERAVLDANDPKKNFLTAAI-RPHGIFGPR-- 196
Query: 210 IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
D ++V I A +G+ + G F +V ++V G I E
Sbjct: 197 --DPQLVPILIDAARKGKMKFMIGNGENLVDFTFVENVVHGHILAAE 241
Score = 40 (19.1 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 309 KAKELLGWEPKVKLRDGLPLMEEDF 333
KAK+L G+ P V + + + + F
Sbjct: 331 KAKKLFGYRPLVTMDEAVERTVQSF 355
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 138 (53.6 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 57/195 (29%), Positives = 95/195 (48%)
Query: 28 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKK--WI--GH-PRFEL 82
SN ILVTGGAG+IGSH V +L+ N +V++ DN S D + + +I H P +++
Sbjct: 2 SNEYILVTGGAGYIGSHTVIELISNGY-KVVIVDNLSNSSYDAVARIEFIVKQHVPFYDV 60
Query: 83 -IR-HDVTEPLL--IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
IR ++ + ++ + H A + P+ NV GT+N+L + K +
Sbjct: 61 DIRNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVK 120
Query: 139 -ILLTSTSEVYGDPL------IHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFD-YHRQ 190
I+ +S++ VYGD + P PE P+ + Y K + E+++ D Y+
Sbjct: 121 TIVFSSSATVYGDVTRFGDNSMIPIPEHC-----PMDPTNPYGRTKFIIESILKDIYNSD 175
Query: 191 HGIQIRIARIFNTYG 205
++ I R FN G
Sbjct: 176 DAWKVAILRYFNPIG 190
Score = 38 (18.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 323 RDGLPLMEEDFRSRLGVPKRN 343
R+ L + D+ SR G P R+
Sbjct: 220 REKLSIFGNDYNSRDGTPIRD 240
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 138 (53.6 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 57/195 (29%), Positives = 95/195 (48%)
Query: 28 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKK--WI--GH-PRFEL 82
SN ILVTGGAG+IGSH V +L+ N +V++ DN S D + + +I H P +++
Sbjct: 2 SNEYILVTGGAGYIGSHTVIELISNGY-KVVIVDNLSNSSYDAVARIEFIVKQHVPFYDV 60
Query: 83 -IR-HDVTEPLL--IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
IR ++ + ++ + H A + P+ NV GT+N+L + K +
Sbjct: 61 DIRNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVK 120
Query: 139 -ILLTSTSEVYGDPL------IHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFD-YHRQ 190
I+ +S++ VYGD + P PE P+ + Y K + E+++ D Y+
Sbjct: 121 TIVFSSSATVYGDVTRFGDNSMIPIPEHC-----PMDPTNPYGRTKFIIESILKDIYNSD 175
Query: 191 HGIQIRIARIFNTYG 205
++ I R FN G
Sbjct: 176 DAWKVAILRYFNPIG 190
Score = 38 (18.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 323 RDGLPLMEEDFRSRLGVPKRN 343
R+ L + D+ SR G P R+
Sbjct: 220 REKLSIFGNDYNSRDGTPIRD 240
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 123 (48.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 73/292 (25%), Positives = 123/292 (42%)
Query: 29 NMRI-LVTGGAGFIGSHLVDKLMEN--EKNEVIVADNYFTGSK-DNLKKWIGHPR---FE 81
N ++ L+TG G GS+L + L+E E + + + F + D+L K H F+
Sbjct: 2 NKKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYK-DPHEEDVNFK 60
Query: 82 LIRHDVTEP-----LLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 134
L D+T+ +L EV D++Y+L + +P T + IGTL +L +
Sbjct: 61 LHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRF 120
Query: 135 VG----ARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 190
+G + STSE+YG PQ ET P RS Y K A + +Y
Sbjct: 121 LGLTKKTKFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKMYAYWITINYRES 175
Query: 191 HGIQIRIARIFNTYGPRMNIDD-GRVVSNFIAQALRG-EPLTVQKPGTQTRSFCYVSDMV 248
+GI +FN PR R ++ +A +G E R + + D V
Sbjct: 176 YGIYACNGILFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYV 235
Query: 249 DGLIRLMEGENTGPVNIGNPGEFTMLELAE-TVKELINPGIEIKMVENTPDD 299
+++ + I ++++ E + + +EL GIE++ V D+
Sbjct: 236 KMQWMMLQQDEPRDFVIATGVQYSVREFIDMSAREL---GIELEFVGKGVDE 284
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 306 DISKAKELLGWEPKVKLR 323
D S AK+ LGW P++ L+
Sbjct: 324 DPSLAKKELGWVPEITLQ 341
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 123 (48.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 73/292 (25%), Positives = 123/292 (42%)
Query: 29 NMRI-LVTGGAGFIGSHLVDKLMEN--EKNEVIVADNYFTGSK-DNLKKWIGHPR---FE 81
N ++ L+TG G GS+L + L+E E + + + F + D+L K H F+
Sbjct: 2 NKKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYK-DPHEEDVNFK 60
Query: 82 LIRHDVTEP-----LLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 134
L D+T+ +L EV D++Y+L + +P T + IGTL +L +
Sbjct: 61 LHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRF 120
Query: 135 VG----ARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 190
+G + STSE+YG PQ ET P RS Y K A + +Y
Sbjct: 121 LGLTKKTKFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKMYAYWITINYRES 175
Query: 191 HGIQIRIARIFNTYGPRMNIDD-GRVVSNFIAQALRG-EPLTVQKPGTQTRSFCYVSDMV 248
+GI +FN PR R ++ +A +G E R + + D V
Sbjct: 176 YGIYACNGILFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYV 235
Query: 249 DGLIRLMEGENTGPVNIGNPGEFTMLELAE-TVKELINPGIEIKMVENTPDD 299
+++ + I ++++ E + + +EL GIE++ V D+
Sbjct: 236 KMQWMMLQQDEPRDFVIATGVQYSVREFIDMSAREL---GIELEFVGKGVDE 284
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 306 DISKAKELLGWEPKVKLR 323
D S AK+ LGW P++ L+
Sbjct: 324 DPSLAKKELGWVPEITLQ 341
>UNIPROTKB|Q9H2F3 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=NAS] [GO:0006699 "bile acid
biosynthetic process" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] [GO:0008206 "bile acid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:AF277719 EMBL:AK057436 EMBL:AK290950 EMBL:AK292068
EMBL:AC135048 EMBL:CH471192 EMBL:BC004929 IPI:IPI00065225
IPI:IPI00106783 RefSeq:NP_001136249.1 RefSeq:NP_001136250.1
RefSeq:NP_079469.2 UniGene:Hs.460618 ProteinModelPortal:Q9H2F3
SMR:Q9H2F3 IntAct:Q9H2F3 STRING:Q9H2F3 PhosphoSite:Q9H2F3
DMDM:47605550 PaxDb:Q9H2F3 PRIDE:Q9H2F3 DNASU:80270
Ensembl:ENST00000262520 Ensembl:ENST00000297679
Ensembl:ENST00000353250 GeneID:80270 KEGG:hsa:80270 UCSC:uc002eaf.2
CTD:80270 GeneCards:GC16P030997 H-InvDB:HIX0038797 HGNC:HGNC:18324
HPA:HPA050521 MIM:607764 MIM:607765 neXtProt:NX_Q9H2F3
Orphanet:79301 PharmGKB:PA134940289 InParanoid:Q9H2F3 KO:K12408
OMA:PCGLRLV OrthoDB:EOG4N5VX7 PhylomeDB:Q9H2F3 BindingDB:Q9H2F3
ChEMBL:CHEMBL3600 GenomeRNAi:80270 NextBio:70733
ArrayExpress:Q9H2F3 Bgee:Q9H2F3 CleanEx:HS_HSD3B7
Genevestigator:Q9H2F3 GermOnline:ENSG00000099377 GO:GO:0047016
GO:GO:0006699 GO:GO:0001558 Uniprot:Q9H2F3
Length = 369
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 63/208 (30%), Positives = 97/208 (46%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKN--EVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
LVTGG GF+G H+V L++ E E+ V D + + LK G R I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT--GPVRVTAIQGDVTQA 70
Query: 91 -----LLIEVDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGARILL-TS 143
+ + H A +F + +P KTI + NV GT N++ + G R L+ TS
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGRASP-KTIHEVNVQGTRNVIEACVQTGTRFLVYTS 128
Query: 144 TSEVYGDPLIHPQPETYWGNVN-PIGV--RSCYDEGKRVAETLMFDYHRQHGIQIR--IA 198
+ EV G P P Y GN + P R Y K +AE L+ + +G ++R +
Sbjct: 129 SMEVVG-PNTKGHP-FYRGNEDTPYEAVHRHPYPCSKALAEWLVLE---ANGRKVRGGLP 183
Query: 199 RIFNTYGPRMNIDDG-RVVSNFIAQALR 225
+ P +G +++ +F Q LR
Sbjct: 184 LVTCALRPTGIYGEGHQIMRDFYRQGLR 211
>UNIPROTKB|O53454 [details] [associations]
symbol:MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:1773 "Mycobacterium tuberculosis"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0030283 "testosterone dehydrogenase
[NAD(P)] activity" evidence=IDA] [GO:0070403 "NAD+ binding"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0030283 PIR:H70897
RefSeq:NP_215622.1 RefSeq:NP_335580.1 RefSeq:YP_006514475.1
ProteinModelPortal:O53454 SMR:O53454 PRIDE:O53454
EnsemblBacteria:EBMYCT00000002215 EnsemblBacteria:EBMYCT00000071008
GeneID:13319678 GeneID:886004 GeneID:924962 KEGG:mtc:MT1137
KEGG:mtu:Rv1106c KEGG:mtv:RVBD_1106c PATRIC:18124264
TubercuList:Rv1106c KO:K16045 OMA:IQLQPTF ProtClustDB:CLSK790953
BioCyc:MetaCyc:MONOMER-16889 BindingDB:O53454 ChEMBL:CHEMBL1744528
GO:GO:0070403 GO:GO:0016042 GO:GO:0008202 Uniprot:O53454
Length = 370
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 74/275 (26%), Positives = 116/275 (42%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWI-GHPRFELIRHDVTE 89
R+LVTGGAGF+G++LV L++ ++ S D + HP+ E+++ D+T+
Sbjct: 16 RVLVTGGAGFVGANLVTTLLDR---------GHWVRSFDRAPSLLPAHPQLEVLQGDITD 66
Query: 90 P----LLIE-VDQIYHLAC-----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-R 138
++ +D I+H A + + +Y ++ NV GT N+L +R G R
Sbjct: 67 ADVCAAAVDGIDTIFHTAAIIELMGGASVTDEYRQ-RSFAVNVGGTENLLHAGQRAGVQR 125
Query: 139 ILLTST-SEVYGDPLIHPQPET--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQI 195
+ TS+ S V G I ET Y N + Y E K VAE + Q+G+
Sbjct: 126 FVYTSSNSVVMGGQNIAGGDETLPYTDRFNDL-----YTETKVVAERFVL---AQNGVDG 177
Query: 196 RIARIFNTYGPRMNIDDGRVVSNFIAQALRG--EPLTVQKPGTQTRSFCYVSDMVDGLI- 252
+ G N D + L+G + L +K S YV +++ G I
Sbjct: 178 MLTCAIRPSGIWGN-GDQTMFRKLFESVLKGHVKVLVGRKSARLDNS--YVHNLIHGFIL 234
Query: 253 ---RLM-EGENTGPVNIGNPGE-FTMLELAETVKE 282
L+ +G G N E M E A V E
Sbjct: 235 AAAHLVPDGTAPGQAYFINDAEPINMFEFARPVLE 269
>FB|FBgn0034794 [details] [associations]
symbol:Gmer "GDP-4-keto-6-deoxy-D-mannose
3,5-epimerase/4-reductase" species:7227 "Drosophila melanogaster"
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0042356 "GDP-4-dehydro-D-rhamnose reductase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0033227
"dsRNA transport" evidence=IMP] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:AE013599 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
GO:GO:0033227 KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
EMBL:AM231688 EMBL:AY060873 EMBL:AY119148 RefSeq:NP_611734.1
UniGene:Dm.739 ProteinModelPortal:Q9W1X8 SMR:Q9W1X8 STRING:Q9W1X8
PaxDb:Q9W1X8 PRIDE:Q9W1X8 EnsemblMetazoa:FBtr0071905 GeneID:37638
KEGG:dme:Dmel_CG3495 CTD:37638 FlyBase:FBgn0034794
GeneTree:ENSGT00390000004681 InParanoid:Q9W1X8 OrthoDB:EOG4XWDDK
PhylomeDB:Q9W1X8 GenomeRNAi:37638 NextBio:804682 Bgee:Q9W1X8
GermOnline:CG3495 Uniprot:Q9W1X8
Length = 321
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 71/301 (23%), Positives = 120/301 (39%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
++LVTGG G +G L + E + +F GSKD +L T+
Sbjct: 3 KVLVTGGTGLVGKALEAVIKEQSPED---EQWFFAGSKDA----------DLTNLAATQA 49
Query: 91 LLI--EVDQIYHLACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 146
L + + HLA +F+ N + ++ N++ N+L A G +++ ++
Sbjct: 50 LFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTC 109
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGP 206
++ D +P ET N P Y KR+ + YH ++G N +GP
Sbjct: 110 IFPDKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGP 169
Query: 207 RMNIDD--GRVVSNFIAQA--LRGE----P-----LTVQKPGTQTRSFCYVSDMVDGLIR 253
N + V+ I + L E P TV G R F Y D+ + +I
Sbjct: 170 HDNYNPEVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIW 229
Query: 254 LMEG-ENTGPVNIG--NPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKA 310
++ E+ P+ + E T+ E+A+ V + N ++V +T Q K S A
Sbjct: 230 VLRNYESVEPIILSADEVQEVTIFEVAQAVAKAFN--FNGRLVCDTSKSDGQYKKTASNA 287
Query: 311 K 311
K
Sbjct: 288 K 288
>ZFIN|ZDB-GENE-030131-5673 [details] [associations]
symbol:hsd3b7 "hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase" species:7955
"Danio rerio" [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-030131-5673 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
CTD:80270 KO:K12408 GO:GO:0016853 EMBL:BC045457 IPI:IPI00489625
RefSeq:NP_956103.1 UniGene:Dr.32972 ProteinModelPortal:Q7ZVQ1
STRING:Q7ZVQ1 GeneID:327462 KEGG:dre:327462 InParanoid:Q7ZVQ1
NextBio:20810040 ArrayExpress:Q7ZVQ1 Uniprot:Q7ZVQ1
Length = 368
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 49/172 (28%), Positives = 85/172 (49%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKN--EVIVAD-NYFTG----SKDNLKKWIGHPR 79
+S + ++TGG GF+G HL+ L+E +KN E+ + D N F S +++K I +
Sbjct: 6 KSKLTYVITGGCGFLGQHLLRVLLEKKKNVKEIRLFDKNVFPSLQSESTEDVKVVI--IQ 63
Query: 80 FELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGAR 138
++ +++ + D ++H A ++YK P K I NV GT N + +G +
Sbjct: 64 GDITKYEDVRNAFLGADLVFHAASLVD-VWYKI-PEKVIFAVNVQGTENAIKACVEIGIQ 121
Query: 139 ILL-TSTSEVYGDPLIHPQPETYWGNVN-PIGV--RSCYDEGKRVAETLMFD 186
L+ TS+ EV G P + E GN + P + Y + K AE ++ +
Sbjct: 122 YLVYTSSMEVVG-PNVKGD-EFVRGNEDTPYNIFHEMPYPKSKAAAEKIVLE 171
>CGD|CAL0005951 [details] [associations]
symbol:ERG26 species:5476 "Candida albicans" [GO:0000252 "C-3
sterol dehydrogenase (C-4 sterol decarboxylase) activity"
evidence=IGI;ISS] [GO:0006696 "ergosterol biosynthetic process"
evidence=IGI;ISS] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 106 (42.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 55/235 (23%), Positives = 102/235 (43%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGH-P-RFELIR 84
+S +L+ GG+GF+G HL+++ + N I + + L K+ P + + +
Sbjct: 3 ESLQSVLIIGGSGFLGLHLIEQFYRHCPNVAITVFDV-RPLPEKLSKYFTFDPSKIQFFK 61
Query: 85 HDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTI------KTNVIGTLNMLGLAKRVGAR 138
D+T + D I C I + +P+ + K NV GT N+L +A+++ +
Sbjct: 62 GDLTSDKDVS-DAINQSKCDV--IVHSASPMHGLPQEIYEKVNVQGTKNLLSVAQKLHVK 118
Query: 139 ILL-TSTSEVY--GDPLIHPQPETY-WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQ 194
L+ TS++ V G +I+ ET+ + V+ G Y+E K AE + + ++
Sbjct: 119 ALVYTSSAGVIFNGQDVINAD-ETWPYPEVHMDG----YNETKAAAEEAVMKANDNDQLR 173
Query: 195 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVD 249
R +GP D ++V A A G+ + YV ++ D
Sbjct: 174 TVCLRPAGIFGP----GDRQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVAD 224
Score = 61 (26.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 303 RKPDISKAKELLGWEPKVKLRDGL 326
R +I+KAK+LLG++P+V L G+
Sbjct: 316 RYHNIAKAKKLLGYKPEVDLETGI 339
>UNIPROTKB|Q5A1B0 [details] [associations]
symbol:ERG26 "Putative uncharacterized protein ERG26"
species:237561 "Candida albicans SC5314" [GO:0000252 "C-3 sterol
dehydrogenase (C-4 sterol decarboxylase) activity" evidence=IGI]
[GO:0006696 "ergosterol biosynthetic process" evidence=IGI]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 106 (42.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 55/235 (23%), Positives = 102/235 (43%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGH-P-RFELIR 84
+S +L+ GG+GF+G HL+++ + N I + + L K+ P + + +
Sbjct: 3 ESLQSVLIIGGSGFLGLHLIEQFYRHCPNVAITVFDV-RPLPEKLSKYFTFDPSKIQFFK 61
Query: 85 HDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTI------KTNVIGTLNMLGLAKRVGAR 138
D+T + D I C I + +P+ + K NV GT N+L +A+++ +
Sbjct: 62 GDLTSDKDVS-DAINQSKCDV--IVHSASPMHGLPQEIYEKVNVQGTKNLLSVAQKLHVK 118
Query: 139 ILL-TSTSEVY--GDPLIHPQPETY-WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQ 194
L+ TS++ V G +I+ ET+ + V+ G Y+E K AE + + ++
Sbjct: 119 ALVYTSSAGVIFNGQDVINAD-ETWPYPEVHMDG----YNETKAAAEEAVMKANDNDQLR 173
Query: 195 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVD 249
R +GP D ++V A A G+ + YV ++ D
Sbjct: 174 TVCLRPAGIFGP----GDRQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVAD 224
Score = 61 (26.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 303 RKPDISKAKELLGWEPKVKLRDGL 326
R +I+KAK+LLG++P+V L G+
Sbjct: 316 RYHNIAKAKKLLGYKPEVDLETGI 339
>UNIPROTKB|Q4K6F9 [details] [associations]
symbol:rfbG "CDP-glucose-4,6-dehydratase" species:220664
"Pseudomonas protegens Pf-5" [GO:0009243 "O antigen biosynthetic
process" evidence=ISS] [GO:0047733 "CDP-glucose 4,6-dehydratase
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009243
RefSeq:YP_262174.1 ProteinModelPortal:Q4K6F9 SMR:Q4K6F9
STRING:Q4K6F9 GeneID:3479503 KEGG:pfl:PFL_5095 PATRIC:19879659
HOGENOM:HOG000167999 KO:K01709 OMA:KCYENKE ProtClustDB:CLSK715086
BioCyc:PFLU220664:GIX8-5136-MONOMER GO:GO:0047733
InterPro:IPR013445 PANTHER:PTHR10366:SF33 TIGRFAMs:TIGR02622
Uniprot:Q4K6F9
Length = 361
Score = 125 (49.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 62/253 (24%), Positives = 107/253 (42%)
Query: 96 DQIYHLAC-PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GARILLTSTSEVYGDPLI 153
D + H+A P + Y+ P++T TNV+GTL++L A+ R ++ T++
Sbjct: 85 DVLIHMAAQPLVRLSYR-EPLETYATNVMGTLHVLEAARLCPNLRAIVNVTTDK-----C 138
Query: 154 HPQPETYWG--NVNPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIQIRIARIFNTYGP 206
+ E WG P+G Y K E + Y + AR N G
Sbjct: 139 YENREWEWGYREDEPMGGHDPYSNSKGCVELITASYRNSFFNTPQAAALASARAGNVIGG 198
Query: 207 RMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME---------- 256
+D R++ + + +G+P+TV+ P TR + +V + + G + L E
Sbjct: 199 GDWAED-RLIPDILRAFEKGQPVTVRNPQA-TRPWQHVLEPLSGYLVLAEHLWKNGHQFA 256
Query: 257 -GENTGPVNI-GNPGEFTMLELAETVKELINPGIEIKMVENT-PDDPRQRKPDISKAKEL 313
G N GP + P E+ + + ++ + G ++ ++ P + K DISKA+
Sbjct: 257 QGWNFGPKDEDARPVEWILNYMVDSWGD----GAHWQLDRDSHPHEANYLKLDISKARAR 312
Query: 314 LGWEPKVKLRDGL 326
L W P L L
Sbjct: 313 LNWAPTWNLEKTL 325
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 124 (48.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 59/230 (25%), Positives = 98/230 (42%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
+ +V GG+GF+G H+V+KL++ + V V D D ++ ++G +L + P
Sbjct: 11 KCVVIGGSGFLGQHMVEKLLDKGYS-VNVFDIQKRFDHDRVQFFLG----DLCNKEALLP 65
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVY- 148
L +V +H A PA N K N +GT ++ K G +++LTS++ V
Sbjct: 66 ALQDVSVAFHCASPAPS---SDNKELFYKVNFMGTKAVIEACKEAGVQKLVLTSSASVVF 122
Query: 149 -GDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIA-RIFNTYGP 206
G + + + + PI Y E K + E + + A R +GP
Sbjct: 123 EGTDIKNGTEDLPYAK-KPIDY---YTETKILQEKEVLSANDPDNNFFTTAIRPHGIFGP 178
Query: 207 RMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
R D ++V I A G+ + G F YV ++V G I E
Sbjct: 179 R----DPQLVPILIQAAKSGKMKFIIGDGKNLVDFTYVENVVHGHILAAE 224
>UNIPROTKB|Q47WH1 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000168011 KO:K02377
OMA:ASVHVMN RefSeq:YP_270851.1 ProteinModelPortal:Q47WH1
STRING:Q47WH1 GeneID:3522019 KEGG:cps:CPS_4200 PATRIC:21471263
ProtClustDB:CLSK2768411 BioCyc:CPSY167879:GI48-4210-MONOMER
Uniprot:Q47WH1
Length = 313
Score = 123 (48.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 73/314 (23%), Positives = 129/314 (41%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE 89
M+IL+TG G +G ++++ +++ + T S L L+ T+
Sbjct: 1 MKILLTGANGMVGKNILELASKHQHT-------FLTPSSKVLN---------LLDAASTQ 44
Query: 90 PLLIE--VDQIYHLACPASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVGARILLT-STS 145
L+E D I H A I +PVK + N+ LN+L AK G + L S+S
Sbjct: 45 AYLVEHKPDMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSS 104
Query: 146 EVYGDPLIHPQPETYW--GNVNPIGVRSCYDEGKRVAETLMFDY--HRQHGIQIRIARIF 201
+Y ++P E G + P Y K +A T + +Y H + + +
Sbjct: 105 CMYPRDALNPLSEELILKGELEP--TNEGYALAK-IASTRLCEYISHEEPELLYKTIIPC 161
Query: 202 NTYG--PRMNIDDGRVVSNFIAQAL--RGEPLT---VQKPGTQTRSFCYVSDMVDGLIRL 254
N YG + + + ++ I + + + + LT + G R F Y D+ D +
Sbjct: 162 NLYGRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFYA 221
Query: 255 MEGENTGP--VNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKE 312
+ + P +N+G +FT+ + + + E+I K P +Q+ D +K
Sbjct: 222 IANFSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSGTFKHDLTKPVGMKQKLIDDNKLNA 281
Query: 313 LLGWEPKVKLRDGL 326
GW K L +GL
Sbjct: 282 F-GWSYKTDLTEGL 294
>TIGR_CMR|CPS_4200 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase
family protein" species:167879 "Colwellia psychrerythraea 34H"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000168011 KO:K02377 OMA:ASVHVMN RefSeq:YP_270851.1
ProteinModelPortal:Q47WH1 STRING:Q47WH1 GeneID:3522019
KEGG:cps:CPS_4200 PATRIC:21471263 ProtClustDB:CLSK2768411
BioCyc:CPSY167879:GI48-4210-MONOMER Uniprot:Q47WH1
Length = 313
Score = 123 (48.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 73/314 (23%), Positives = 129/314 (41%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE 89
M+IL+TG G +G ++++ +++ + T S L L+ T+
Sbjct: 1 MKILLTGANGMVGKNILELASKHQHT-------FLTPSSKVLN---------LLDAASTQ 44
Query: 90 PLLIE--VDQIYHLACPASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVGARILLT-STS 145
L+E D I H A I +PVK + N+ LN+L AK G + L S+S
Sbjct: 45 AYLVEHKPDMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSS 104
Query: 146 EVYGDPLIHPQPETYW--GNVNPIGVRSCYDEGKRVAETLMFDY--HRQHGIQIRIARIF 201
+Y ++P E G + P Y K +A T + +Y H + + +
Sbjct: 105 CMYPRDALNPLSEELILKGELEP--TNEGYALAK-IASTRLCEYISHEEPELLYKTIIPC 161
Query: 202 NTYG--PRMNIDDGRVVSNFIAQAL--RGEPLT---VQKPGTQTRSFCYVSDMVDGLIRL 254
N YG + + + ++ I + + + + LT + G R F Y D+ D +
Sbjct: 162 NLYGRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFYA 221
Query: 255 MEGENTGP--VNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKE 312
+ + P +N+G +FT+ + + + E+I K P +Q+ D +K
Sbjct: 222 IANFSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSGTFKHDLTKPVGMKQKLIDDNKLNA 281
Query: 313 LLGWEPKVKLRDGL 326
GW K L +GL
Sbjct: 282 F-GWSYKTDLTEGL 294
>TAIR|locus:2056171 [details] [associations]
symbol:AT2G02400 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0009809 "lignin biosynthetic
process" evidence=ISS] [GO:0016621 "cinnamoyl-CoA reductase
activity" evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC005312 HOGENOM:HOG000167998 EMBL:BT005781
EMBL:BT006079 EMBL:AK228447 IPI:IPI00542037 PIR:C84436
RefSeq:NP_178345.1 UniGene:At.41493 UniGene:At.69541
ProteinModelPortal:Q9ZVQ2 SMR:Q9ZVQ2 STRING:Q9ZVQ2 PaxDb:Q9ZVQ2
PRIDE:Q9ZVQ2 DNASU:814771 EnsemblPlants:AT2G02400.1 GeneID:814771
KEGG:ath:AT2G02400 TAIR:At2g02400 InParanoid:Q9ZVQ2 OMA:NGFIGSW
PhylomeDB:Q9ZVQ2 ProtClustDB:CLSN2683687 ArrayExpress:Q9ZVQ2
Genevestigator:Q9ZVQ2 Uniprot:Q9ZVQ2
Length = 318
Score = 123 (48.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 65/267 (24%), Positives = 116/267 (43%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHP-RFELIRHDVTEP 90
+ VTG GFIGS ++ L+E + I A Y +L + G + ++ D+ +
Sbjct: 6 VCVTGANGFIGSWIIRTLIEKGYTK-IHASIYPGSDPTHLLQLPGSDSKIKIFEADLLDS 64
Query: 91 LLIE--VDQ---IYHLACPASPIFYKYNPVKT-IKTNVIGTLNMLGLAKRVGAR-ILLTS 143
I +D ++H+A P + + +P K ++ V GT+N+L AKR R +++TS
Sbjct: 65 DAISRAIDGCAGVFHVASPCT-LDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVITS 123
Query: 144 T-SEVYGDPLIH---PQPETYWGNVNPIGVRS-CYDEGKRVAETLMFDYHRQHGIQIRIA 198
+ S + +P P E+ W +++ R Y K +AE +++ +HG I
Sbjct: 124 SISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTNIVTI 183
Query: 199 RIFNTYGPRM--NIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
GP + N++ V + Q L+G T + +V D+ G + L E
Sbjct: 184 HPSTCLGPLLQPNLNASCAV---LLQLLQGSTETQEH---HWLGVVHVKDVAKGHVMLFE 237
Query: 257 GENTGPVNIGNPGEFTMLELAETVKEL 283
+ + G + E A V +L
Sbjct: 238 TPDASGRFLCTNGIYQFSEFAALVSKL 264
>WB|WBGene00017429 [details] [associations]
symbol:F13D11.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00390000002618 HOGENOM:HOG000167998 EMBL:FO081142
PIR:T16059 RefSeq:NP_508978.3 ProteinModelPortal:Q19391 SMR:Q19391
PaxDb:Q19391 EnsemblMetazoa:F13D11.4.1 EnsemblMetazoa:F13D11.4.2
GeneID:184416 KEGG:cel:CELE_F13D11.4 UCSC:F13D11.4.1 CTD:184416
WormBase:F13D11.4 InParanoid:Q19391 OMA:ESDNERI NextBio:924666
Uniprot:Q19391
Length = 343
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 47/167 (28%), Positives = 78/167 (46%)
Query: 31 RILVTGGAGFIGSHLVDKLMENE-KNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE 89
++LVTG +GFIG+H V+ L++N + V D +KK EL+ D+ +
Sbjct: 7 KVLVTGASGFIGTHCVEILLKNGYRVRGTVRDLNNKAKVQPIKKLDKKNHLELVEADLLD 66
Query: 90 PL-----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGAR-ILLT 142
+ D + H+A P PI + + I T V GT+N+L +A+ R ++LT
Sbjct: 67 STCWKKAVAGCDYVLHVASPF-PIV---SDERCITTAVEGTMNVLKAIAEDGNVRKLVLT 122
Query: 143 STSEVYGDPLIHPQ--PETYWGNVNPIGVRSCYDEGKRVAETLMFDY 187
S+ + + E W N+ V CY + K +AE +D+
Sbjct: 123 SSCAAVNEGYTQDRVFDEDSWSNLESDMV-DCYIKSKTLAEKAAWDF 168
>UNIPROTKB|Q15738 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase
(decarboxylating) activity" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0060716 "labyrinthine layer
blood vessel development" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] UniPathway:UPA00770 Reactome:REACT_111217
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 DrugBank:DB00157 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 OMA:IQLQPTF
GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:CH471172 EMBL:U82671 KO:K07748 GO:GO:0047012
CTD:50814 HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:U47105
EMBL:BC000245 EMBL:BC007816 IPI:IPI00019407 RefSeq:NP_001123237.1
RefSeq:NP_057006.1 UniGene:Hs.57698 ProteinModelPortal:Q15738
SMR:Q15738 IntAct:Q15738 STRING:Q15738 PhosphoSite:Q15738
DMDM:8488997 REPRODUCTION-2DPAGE:Q15738 PaxDb:Q15738
PeptideAtlas:Q15738 PRIDE:Q15738 DNASU:50814
Ensembl:ENST00000370274 Ensembl:ENST00000440023 GeneID:50814
KEGG:hsa:50814 UCSC:uc004fgs.1 GeneCards:GC0XP151999
HGNC:HGNC:13398 HPA:HPA000248 HPA:HPA000571 MIM:300275 MIM:300831
MIM:308050 neXtProt:NX_Q15738 Orphanet:139 Orphanet:251383
PharmGKB:PA134959020 InParanoid:Q15738 PhylomeDB:Q15738
BioCyc:MetaCyc:HS07423-MONOMER GenomeRNAi:50814 NextBio:53261
ArrayExpress:Q15738 Bgee:Q15738 CleanEx:HS_NSDHL
Genevestigator:Q15738 GermOnline:ENSG00000147383 Uniprot:Q15738
Length = 373
Score = 116 (45.9 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 61/229 (26%), Positives = 97/229 (42%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
R V GG+GF+G H+V++L+ V V D ++ ++G +L P
Sbjct: 39 RCTVIGGSGFLGQHMVEQLLARGY-AVNVFDIQQGFDNPQVRFFLG----DLCSRQDLYP 93
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYG 149
L V+ ++H C ASP N + N IGT N++ K G +++LTS++ V
Sbjct: 94 ALKGVNTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIF 150
Query: 150 DPL-IHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIA-RIFNTYGPR 207
+ + I E + PI Y E K + E + + + A R +GPR
Sbjct: 151 EGVDIKNGTEDLPYAMKPIDY---YTETKILQERAVLGANDPEKNFLTTAIRPHGIFGPR 207
Query: 208 MNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
D ++V I A G+ V G F +V ++V G I E
Sbjct: 208 ----DPQLVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVHGHILAAE 252
Score = 46 (21.3 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 309 KAKELLGWEPKVKLRDGLPLMEEDFR 334
+AK+ +G++P V + D + + FR
Sbjct: 342 RAKKAMGYQPLVTMDDAMERTVQSFR 367
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 107 (42.7 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 52/195 (26%), Positives = 86/195 (44%)
Query: 33 LVTGGAGFIGSHLVDKLMEN--------EKNEVIVADNYFTGSKDNLKKWIGHPRFELIR 84
L+TG G GS+L + L+E ++ + + +DN +K + +F L
Sbjct: 8 LITGITGQDGSYLAELLLEKGYEVHGIKRRSSSLNTERIDHIYQDNHEK---NQKFFLHY 64
Query: 85 HDVTEP-----LLIEV--DQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVG 136
D+T+ +L +V D++Y+L S + + P T + IGTL +L + +G
Sbjct: 65 GDLTDSSNLTRILKDVQPDEVYNLGAQ-SHVAVSFECPEYTADVDAIGTLRLLEAIRFLG 123
Query: 137 ----ARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 192
+ STSE+YG+ PQ ET P RS Y K A ++ +Y +G
Sbjct: 124 LEKKTKFYQASTSELYGEVQEIPQSET-----TPFHPRSPYAVAKMYAYWIVVNYRESYG 178
Query: 193 IQIRIARIFNTYGPR 207
+ +FN PR
Sbjct: 179 MYACNGILFNHESPR 193
Score = 56 (24.8 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 306 DISKAKELLGWEPKVKLRD 324
D SKAKE LGW P++ + +
Sbjct: 325 DPSKAKEKLGWVPQITVEE 343
>UNIPROTKB|F6XJP3 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 OMA:IQLQPTF
Ensembl:ENSCAFT00000030435 EMBL:AAEX03027066
ProteinModelPortal:F6XJP3 Uniprot:F6XJP3
Length = 361
Score = 122 (48.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 61/232 (26%), Positives = 103/232 (44%)
Query: 34 VTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE---- 89
V GG+GF+G H+V++L+ A Y D +++ +PR + D+
Sbjct: 30 VIGGSGFLGQHMVEQLL---------ARGYTVNVFD-MRQGFDNPRVQFFLGDLCSQQDL 79
Query: 90 -PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 147
P L V ++H C ASP N + N IGT N++ K G +++LTS++ V
Sbjct: 80 YPALKGVSTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASV 136
Query: 148 YGDPL-IHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYH--RQHGIQIRIARIFNTY 204
+ + I E + PI Y E K + E + D + +++ + + I R +
Sbjct: 137 IFEGVNIKNGTEDLPYAMKPIDY---YTETKILQERAVLDANDPKRNFLTMAI-RPHGIF 192
Query: 205 GPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
GPR D ++V I A +G+ + G F +V ++V G I E
Sbjct: 193 GPR----DPQLVPILIEAARKGKMKFMIGNGENLVDFTFVENVVHGHILAAE 240
>UNIPROTKB|E2QVH4 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0005811 GO:GO:0008203 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 ProteinModelPortal:E2QVH4 Ensembl:ENSCAFT00000030435
Uniprot:E2QVH4
Length = 373
Score = 122 (48.0 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 61/232 (26%), Positives = 103/232 (44%)
Query: 34 VTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE---- 89
V GG+GF+G H+V++L+ A Y D +++ +PR + D+
Sbjct: 42 VIGGSGFLGQHMVEQLL---------ARGYTVNVFD-MRQGFDNPRVQFFLGDLCSQQDL 91
Query: 90 -PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 147
P L V ++H C ASP N + N IGT N++ K G +++LTS++ V
Sbjct: 92 YPALKGVSTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASV 148
Query: 148 YGDPL-IHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYH--RQHGIQIRIARIFNTY 204
+ + I E + PI Y E K + E + D + +++ + + I R +
Sbjct: 149 IFEGVNIKNGTEDLPYAMKPIDY---YTETKILQERAVLDANDPKRNFLTMAI-RPHGIF 204
Query: 205 GPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
GPR D ++V I A +G+ + G F +V ++V G I E
Sbjct: 205 GPR----DPQLVPILIEAARKGKMKFMIGNGENLVDFTFVENVVHGHILAAE 252
>ASPGD|ASPL0000028763 [details] [associations]
symbol:AN11081 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694 EMBL:BN001305
ProteinModelPortal:C8VEF0 EnsemblFungi:CADANIAT00002923 OMA:WIAVITE
Uniprot:C8VEF0
Length = 364
Score = 109 (43.4 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 61/230 (26%), Positives = 98/230 (42%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPL 91
+L+TGG GFI H++ KL+ + N I + T N+ H + H
Sbjct: 9 VLITGGNGFIAYHIIAKLLAEDPNCTIHCIDINTTR--NI-----HASDSVTYHQGDLSS 61
Query: 92 LIEVDQIYHLACPASPIFYKYNPV-----KTIKTNVI--GTLNMLGLAKRVGA--RILLT 142
L +V +I LA P + IF+ +P ++ +VI GT ++L A +G ++ T
Sbjct: 62 LADVSRIMELARPVT-IFHTASPEFSEAPESAYHDVIVTGTHHLLNSAASIGTVKALINT 120
Query: 143 STSEVYGD---PLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
STS V D L++ + + P + Y K AE + +RQHG R
Sbjct: 121 STSGVINDNHTDLVNGTEDM--PILRPPVQKRLYCLAKADAEEAIQAANRQHGFLTCALR 178
Query: 200 IFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVD 249
+G R G++V+ +A+A G G F YV ++ D
Sbjct: 179 PCLAFGERDTNSMGKMVA--VARA--GRSRFQMGYGKNAYDFVYVGNLAD 224
Score = 53 (23.7 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 8/25 (32%), Positives = 19/25 (76%)
Query: 302 QRKPDISKAKELLGWEPKVKLRDGL 326
+R + KA+ +LG++P+V +++G+
Sbjct: 325 ERTLNCEKARRVLGYQPRVGMQEGI 349
>ASPGD|ASPL0000035041 [details] [associations]
symbol:AN3119 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 RefSeq:XP_660723.1
ProteinModelPortal:Q5B8L1 EnsemblFungi:CADANIAT00009957
GeneID:2873998 KEGG:ani:AN3119.2 HOGENOM:HOG000218208 OMA:WFASPRS
OrthoDB:EOG41NXW0 Uniprot:Q5B8L1
Length = 316
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 72/292 (24%), Positives = 120/292 (41%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE 89
M IL+TG AGFIG L +L+ + +++ D ++ + + +P+ VT
Sbjct: 1 MHILITGAAGFIGQLLARELLNDPSYTLVLTDI----NEPPIPAGVKYPQNA---RTVTA 53
Query: 90 PLLIEVDQIYHLACPASPIFY-------KYNPVKTIKTNVIGTLNMLGLAKRV--GARIL 140
L+ D + + A F+ + N + NV T +L + G R++
Sbjct: 54 DLVKAADTVVDKSLDAVYAFHGIMSSGSEANFDLGMTVNVDATRKLLEALRATCPGVRVI 113
Query: 141 LTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIQIRI 197
+S+ VYG PL PE V P +S Y K + ETL+ +Y R+ G +R
Sbjct: 114 YSSSQAVYGQPL----PEVVDDTVIPTP-QSSYGAEKLICETLVNEYTRRGFITGFTLRF 168
Query: 198 ARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSF-CYVSDMVDGLIRLME 256
I G R +S I + L GE + +S+ C +V LI +
Sbjct: 169 PTISVRPG-RPTAAASSFLSGMIREPLNGEECVIPLEDRSFKSWLCSPKTLVHNLILTLS 227
Query: 257 -GENTGPVNIGN---PGEFTMLELAETVKELINPGIEIKM-VENTPDDPRQR 303
++ P++I PG + + E + L G E K+ + +DP R
Sbjct: 228 LPADSLPLHIRQVNVPG--ICVTVQEMMDALAKIGGEDKLALLKEKEDPTLR 277
>FB|FBgn0036997 [details] [associations]
symbol:CG5955 species:7227 "Drosophila melanogaster"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GeneTree:ENSGT00390000014037 KO:K15789 OMA:DYAVEIF EMBL:AY058410
RefSeq:NP_649230.1 UniGene:Dm.4281 SMR:Q9VPE8 STRING:Q9VPE8
EnsemblMetazoa:FBtr0078197 GeneID:40268 KEGG:dme:Dmel_CG5955
UCSC:CG5955-RA FlyBase:FBgn0036997 InParanoid:Q9VPE8
OrthoDB:EOG4VT4CZ GenomeRNAi:40268 NextBio:817884 Uniprot:Q9VPE8
Length = 367
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 55/237 (23%), Positives = 102/237 (43%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRF-ELIRHDVTE 89
+IL+TGG G +G L ++ ++ + S+ L+ G F +++ +
Sbjct: 47 KILITGGLGQLGIECAKLLRTQYGSQNVILSDIIKPSQSVLEN--GPYIFADILDFKGLQ 104
Query: 90 PLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV 147
++++ +D + H + S + + P+ ++ N+ G N++ LAK+ RI + ST
Sbjct: 105 KIVVDHRIDWLIHFSALLSAVGEQNVPL-AVRVNIEGVHNVIELAKQYKLRIFVPSTIGA 163
Query: 148 YG-DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR---IFNT 203
+G D +P P NV R+ Y K AE + Y+ + G+ R R + ++
Sbjct: 164 FGPDSPRNPTP-----NVTIQRPRTIYGVSKVHAELIGEYYYHKFGLDFRCLRFPGVISS 218
Query: 204 YGPRMNIDDGRVVSNFIAQALRGEPLTVQ-KPGTQTRSFCYVSDMVDGLIRLMEGEN 259
P D V +ALR T +P T+ Y+ D + L+ M N
Sbjct: 219 DPPGGGTTDYAVA--VFHEALRNGKYTCYLRPDTRL-PMMYIEDCLRALLEFMRAPN 272
>TAIR|locus:2119161 [details] [associations]
symbol:FLDH "farnesol dehydrogenase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006721 "terpenoid
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009788 "negative regulation of abscisic acid mediated
signaling pathway" evidence=IMP] [GO:0016487 "farnesol metabolic
process" evidence=IDA] [GO:0047886 "farnesol dehydrogenase
activity" evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005783 GO:GO:0005886 GO:GO:0005774 EMBL:CP002687
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AL035678
EMBL:AL161583 GO:GO:0009788 UniGene:At.46532 UniGene:At.66644
UniGene:At.68114 GO:GO:0016487 EMBL:AF370578 EMBL:BT002342
IPI:IPI00530523 PIR:T05987 RefSeq:NP_195062.1 HSSP:Q8T8E9
ProteinModelPortal:Q9SZB3 SMR:Q9SZB3 IntAct:Q9SZB3 STRING:Q9SZB3
PRIDE:Q9SZB3 EnsemblPlants:AT4G33360.1 GeneID:829473
KEGG:ath:AT4G33360 TAIR:At4g33360 HOGENOM:HOG000168005
InParanoid:Q9SZB3 KO:K15891 OMA:EVELAYG PhylomeDB:Q9SZB3
ProtClustDB:CLSN2685493 ArrayExpress:Q9SZB3 Genevestigator:Q9SZB3
GO:GO:0047886 Uniprot:Q9SZB3
Length = 344
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 65/276 (23%), Positives = 113/276 (40%)
Query: 29 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT 88
NM+ILVTG G++G+ L L+ + + A T +L P EL DVT
Sbjct: 12 NMKILVTGSTGYLGARLCHVLLR--RGHSVRALVRRTSDLSDLP-----PEVELAYGDVT 64
Query: 89 E-PLLIEV----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILL 141
+ L + D ++H A P + +P + I NV G N+L K +I+
Sbjct: 65 DYRSLTDACSGCDIVFHAAALVEP--WLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIY 122
Query: 142 TSTSEVYG--DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TS+ G D + + + + N + Y+ K VA+ + + + G+ I +
Sbjct: 123 TSSFFALGSTDGSVANENQVH----NERFFCTEYERSKAVADKMALNAASE-GVPIILLY 177
Query: 200 IFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGEN 259
+GP + +V+ + + G GT SF +V D+V+G + ME
Sbjct: 178 PGVIFGPG-KLTSANMVARMLIERFNGRLPGYIGSGTDRYSFSHVDDVVEGHVAAMEKGR 236
Query: 260 TGPVNI--GNPGEFTML-ELAETVKELINPGIEIKM 292
G + G F ++ ++A + P I +
Sbjct: 237 LGERYLLTGENASFKLVFDMAALITGTKKPNFSIPL 272
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 67/248 (27%), Positives = 106/248 (42%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSK-----D-NLKKWIGHPRFELIRH 85
I+VTGGAGFIGS++V L + +++V DN G+K D N+ ++ F LI+
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDF-LIQI 60
Query: 86 DVTEPLLIEVDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E +V+ I+H AC ++ +++ + N + +L L S+
Sbjct: 61 MAGEEFG-DVEAIFHEGACSSTT---EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 116
Query: 145 SEVYGDPLIH-PQPETYWGNVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
+ YG + Y +N G + +DE V + L + QI R FN
Sbjct: 117 AATYGGRTSDFIESREYEKPLNVYGYSKFLFDE--YVRQILP-----EANSQIVGFRYFN 169
Query: 203 TYGPRMNIDDGRVVS---NFIAQALRGE-PLTVQKPGTQTRSFCYVSDMVDGLIRLMEGE 258
YGPR G + S + Q GE P + R F YV D+ D + +E
Sbjct: 170 VYGPREG-HKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 228
Query: 259 NTGPVNIG 266
+G N+G
Sbjct: 229 VSGIFNLG 236
>UNIPROTKB|Q81V79 [details] [associations]
symbol:BA_0621 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000034276
OMA:DYAVEIF RefSeq:NP_843152.1 RefSeq:YP_017248.1
ProteinModelPortal:Q81V79 SMR:Q81V79 DNASU:1087994
EnsemblBacteria:EBBACT00000011110 EnsemblBacteria:EBBACT00000017957
GeneID:1087994 GeneID:2814938 KEGG:ban:BA_0621 KEGG:bar:GBAA_0621
PATRIC:18778842 ProtClustDB:CLSK865117
BioCyc:BANT261594:GJ7F-674-MONOMER Uniprot:Q81V79
Length = 317
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 72/288 (25%), Positives = 110/288 (38%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYF-TGSKDNLKKWIGHPRFELIRHDVTE 89
+ILVTG G IGS LV KL +V A N T ++ + + FE + DVT+
Sbjct: 3 KILVTGSLGQIGSELVMKL-----RDVYGASNVIATDIRETDSEVVTSGPFETL--DVTD 55
Query: 90 PLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 142
+ EVD I HLA S K NP+ N+ G +N L A+ + +
Sbjct: 56 GQKLHDIAKRNEVDTIIHLAALLSATAEK-NPLFAWNLNMGGLVNALEAARELNCKFFTP 114
Query: 143 STSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR--- 199
S+ +G P+ T + + Y K E L YH++ G+ R R
Sbjct: 115 SSIGAFGPST--PKDNTPQDTIQR--PTTMYGVNKVAGELLCDYYHQKFGVDTRGVRFPG 170
Query: 200 IFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGEN 259
+ + P V + +G + GT Y+ D + +I LME +
Sbjct: 171 LISYVAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYM-DMMYMPDALQAIISLMEADP 229
Query: 260 TGPVNIGNPGEFTMLELA-ETVKELINPGIEIKMVENTPDDPRQRKPD 306
+ V+ N T + E + I I ++ D RQ D
Sbjct: 230 SKLVH-RNAFNITAMSFEPEQIAASIRKHIPTFTMDYAVDPARQTIAD 276
>TIGR_CMR|BA_0621 [details] [associations]
symbol:BA_0621 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0044237 HOGENOM:HOG000034276 OMA:DYAVEIF RefSeq:NP_843152.1
RefSeq:YP_017248.1 ProteinModelPortal:Q81V79 SMR:Q81V79
DNASU:1087994 EnsemblBacteria:EBBACT00000011110
EnsemblBacteria:EBBACT00000017957 GeneID:1087994 GeneID:2814938
KEGG:ban:BA_0621 KEGG:bar:GBAA_0621 PATRIC:18778842
ProtClustDB:CLSK865117 BioCyc:BANT261594:GJ7F-674-MONOMER
Uniprot:Q81V79
Length = 317
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 72/288 (25%), Positives = 110/288 (38%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYF-TGSKDNLKKWIGHPRFELIRHDVTE 89
+ILVTG G IGS LV KL +V A N T ++ + + FE + DVT+
Sbjct: 3 KILVTGSLGQIGSELVMKL-----RDVYGASNVIATDIRETDSEVVTSGPFETL--DVTD 55
Query: 90 PLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 142
+ EVD I HLA S K NP+ N+ G +N L A+ + +
Sbjct: 56 GQKLHDIAKRNEVDTIIHLAALLSATAEK-NPLFAWNLNMGGLVNALEAARELNCKFFTP 114
Query: 143 STSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR--- 199
S+ +G P+ T + + Y K E L YH++ G+ R R
Sbjct: 115 SSIGAFGPST--PKDNTPQDTIQR--PTTMYGVNKVAGELLCDYYHQKFGVDTRGVRFPG 170
Query: 200 IFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGEN 259
+ + P V + +G + GT Y+ D + +I LME +
Sbjct: 171 LISYVAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYM-DMMYMPDALQAIISLMEADP 229
Query: 260 TGPVNIGNPGEFTMLELA-ETVKELINPGIEIKMVENTPDDPRQRKPD 306
+ V+ N T + E + I I ++ D RQ D
Sbjct: 230 SKLVH-RNAFNITAMSFEPEQIAASIRKHIPTFTMDYAVDPARQTIAD 276
>UNIPROTKB|C9JDR0 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0005783 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0008203 GO:GO:0001942
GO:GO:0060716 GO:GO:0007224 EMBL:U82671 HGNC:HGNC:13398
IPI:IPI00646262 ProteinModelPortal:C9JDR0 SMR:C9JDR0 STRING:C9JDR0
PRIDE:C9JDR0 Ensembl:ENST00000432467 ArrayExpress:C9JDR0
Bgee:C9JDR0 Uniprot:C9JDR0
Length = 254
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 61/229 (26%), Positives = 97/229 (42%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
R V GG+GF+G H+V++L+ V V D ++ ++G +L P
Sbjct: 39 RCTVIGGSGFLGQHMVEQLLARGY-AVNVFDIQQGFDNPQVRFFLG----DLCSRQDLYP 93
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYG 149
L V+ ++H C ASP N + N IGT N++ K G +++LTS++ V
Sbjct: 94 ALKGVNTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIF 150
Query: 150 DPL-IHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIA-RIFNTYGPR 207
+ + I E + PI Y E K + E + + + A R +GPR
Sbjct: 151 EGVDIKNGTEDLPYAMKPIDY---YTETKILQERAVLGANDPEKNFLTTAIRPHGIFGPR 207
Query: 208 MNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
D ++V I A G+ V G F +V ++V G I E
Sbjct: 208 ----DPQLVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVHGHILAAE 252
>UNIPROTKB|E2QS16 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270 KO:K12408
OMA:PCGLRLV EMBL:AAEX03004381 RefSeq:XP_547037.1
Ensembl:ENSCAFT00000026560 GeneID:489917 KEGG:cfa:489917
NextBio:20863025 Uniprot:E2QS16
Length = 369
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 53/173 (30%), Positives = 79/173 (45%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKN--EVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
LVTGG GF+G H+V L++ E E+ V D + + LK G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLLELRVFDLHLGAWLEELKT--GPVQVTAIQGDVTQA 70
Query: 91 -----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TST 144
+ + H A +F + +P + NV GT N++ + G R L+ TS+
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGRASPETIYEVNVQGTKNVIEACVQTGTRFLVYTSS 129
Query: 145 SEVYGDPLIHPQPETYWGNVN-PIGV--RSCYDEGKRVAETLMFDYH--RQHG 192
EV G P I Y GN + P R Y K AE L+ + + + HG
Sbjct: 130 MEVVG-PNIKGH-HFYRGNEDTPYEAVHRHPYPCSKAQAERLVLEANGRKVHG 180
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 52/198 (26%), Positives = 96/198 (48%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFT---GSKD------NLKKWIGHPRFE 81
+ILVTGG G+IGSH V +L+E + V++ DN+ G D ++K++ + E
Sbjct: 4 KILVTGGGGYIGSHCVVELIEAGFHPVVI-DNFSNAVRGEGDVPESLRRIEKFMD-TQIE 61
Query: 82 LIRHDVTE-PLLIEVDQIY------HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 134
D+ + P L ++ +++ H A + P++ + N+ GT+N+L + +
Sbjct: 62 FHELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQS 121
Query: 135 VGAR-ILLTSTSEVYGDPLIHPQPETYWGNVNPIG-VRSCYDEGKRVAETLMFDY-HRQH 191
G R ++ +S++ VYGDP P E + P+G + Y + K E ++ D +
Sbjct: 122 HGVRNLVFSSSATVYGDPQKLPIDEQH-----PVGGCTNPYGKTKYFIEEMIRDQCTAEK 176
Query: 192 GIQIRIARIFNTYGPRMN 209
+ R FN G ++
Sbjct: 177 DWNAVLLRYFNPIGAHIS 194
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 117 (46.2 bits), Expect = 0.00022, P = 0.00022
Identities = 72/298 (24%), Positives = 133/298 (44%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
R L+TG GF G ++ D+L + E+ + ++ + +R V E
Sbjct: 9 RALITGLEGFTGRYVADELRRSGY-EIFGTRHSGADEREAGCFRVDICDLAALRRVVEE- 66
Query: 91 LLIEVDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNML-GLA--KRVGARILLTSTSE 146
+E + + HLA + F + I + NV+GT N+L LA R +LL S++
Sbjct: 67 --VEPEVVVHLAAIS---FVAHGEADAIYRANVVGTRNLLEALAGLSRTPRAVLLASSAN 121
Query: 147 VYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNT--Y 204
VYG+ + E+ ++ P + Y K E + + H + I IAR FN
Sbjct: 122 VYGNAPVELIDESV--SLAPA---NDYAVSKLAMEYMARLW--MHRLPIVIARPFNYTGV 174
Query: 205 GPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPV- 263
G + ++VS+F Q R + + + R F V + +RL+E G V
Sbjct: 175 GQASHFLIPKIVSHF--QR-RASVIELGNLDVE-RDFSDVRVVALAYVRLLEVVPAGQVV 230
Query: 264 NIGNPGEFTMLELAETVKELINPGIEIKMVEN--TPDDPRQRKPDISKAKELLG-WEP 318
N+G+ ++ E+ + + IE+++ ++ ++ + D+S+ KEL+G ++P
Sbjct: 231 NVGSGQVVSLREVLAMMSGISGHEIEVRVNPEFVRANEVKRLQGDVSRLKELIGGYQP 288
>RGD|1359337 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005811
"lipid particle" evidence=IEA;ISO] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008203 "cholesterol
metabolic process" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA;ISO] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 RGD:1359337 GO:GO:0005783
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 KO:K07748 GO:GO:0047012 CTD:50814 HOVERGEN:HBG054675
OrthoDB:EOG4NKBVW EMBL:BC087626 IPI:IPI00360954
RefSeq:NP_001009399.1 UniGene:Rn.23620 ProteinModelPortal:Q5PPL3
STRING:Q5PPL3 PRIDE:Q5PPL3 Ensembl:ENSRNOT00000022985 GeneID:309262
KEGG:rno:309262 InParanoid:Q5PPL3 SABIO-RK:Q5PPL3 NextBio:660517
Genevestigator:Q5PPL3 Uniprot:Q5PPL3
Length = 362
Score = 111 (44.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 64/230 (27%), Positives = 99/230 (43%)
Query: 34 VTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLI 93
V GG+GF+G H+V++L+ + V V D ++ +IG +L P L
Sbjct: 31 VIGGSGFLGQHMVEQLL-SRGYAVNVFDVRQGFDNPRVQFFIG----DLCNQQDLYPALK 85
Query: 94 EVDQIYHLACPAS-----PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 148
V ++H A P S +FY+ N T KT VI T G+ K IL +S S V+
Sbjct: 86 GVSTVFHCASPPSNSNNKELFYRVNSTGT-KT-VIETCKEAGVQKL----ILTSSASVVF 139
Query: 149 GDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYH--RQHGIQIRIARIFNTYGP 206
I E + PI Y E K + E + D + +++ + I R +GP
Sbjct: 140 EGVDIKNGTEDLPYAMKPIDY---YTETKILQERAVLDANDPKKNFLTAAI-RPHGIFGP 195
Query: 207 RMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
R D ++V I A +G+ + G F +V ++V G I E
Sbjct: 196 R----DPQLVPVLIDAARKGKMKFMIGNGKNLVDFTFVENVVHGHILAAE 241
Score = 46 (21.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 309 KAKELLGWEPKVKLRDGLPLMEEDF 333
KAK+L+G+ P V + D + + F
Sbjct: 331 KAKKLIGYRPLVTMDDAVERTVQSF 355
>UNIPROTKB|G4N5T6 [details] [associations]
symbol:MGG_08527 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CM001234 RefSeq:XP_003716031.1
EnsemblFungi:MGG_08527T0 GeneID:2678789 KEGG:mgr:MGG_08527
Uniprot:G4N5T6
Length = 339
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 60/243 (24%), Positives = 98/243 (40%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFEL-IRH 85
Q+ IL+TG +G IG L +L+ + + V++ D + + HP + I+
Sbjct: 4 QNKPTILITGASGMIGPLLAARLLSTDTHRVVLTDVV----APTVPPSVAHPENAVCIQA 59
Query: 86 DVTEPLLIEVDQIYHLACPASPIFY-------KYNPVKTIKTNVIGTLNMLG-LAK-RVG 136
D+T P +E A+ +F+ + +P ++ N T +L LA G
Sbjct: 60 DLTNPAALEALVAASQPLTAAFVFHGIMSAGSEADPALAMRVNFDATRALLTHLASTNRG 119
Query: 137 ARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIR 196
R++ S++ VYG PL P T P G Y K + E L+ D R+ +
Sbjct: 120 LRVVYASSNAVYGTPL--PDLVTPATTPTPTGT---YGATKYLCEVLVNDMTRRGLVDAY 174
Query: 197 IARIFNTYGPRMNIDDGRV---VSNFIAQALRGEPLTVQKPGTQTRS-FCYVSDMVDGLI 252
R F T R +S I + L G P V R+ C V+ L+
Sbjct: 175 SVR-FPTVSVRPGAPSNAASAFLSGIIREPLAGLPCVVPIADRAFRATLCTPRVCVENLV 233
Query: 253 RLM 255
R++
Sbjct: 234 RVL 236
>UNIPROTKB|Q06963 [details] [associations]
symbol:hldD "ADP-L-glycero-D-manno-heptose-6-epimerase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008712 "ADP-glyceromanno-heptose 6-epimerase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] UniPathway:UPA00356
HAMAP:MF_01601 InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0050661 GO:GO:0009244 EMBL:X59554 GO:GO:0097171 KO:K03274
OMA:AVNLWFW ProtClustDB:PRK11150 GO:GO:0008712
PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547 EMBL:U47542
EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 67/266 (25%), Positives = 111/266 (41%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELI-RHDVTEP 90
I+VTGGAG IGS+++ L E +++V D+ G K K + + + R D
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRK--FKNLVDLQIADYMDRDDFLAQ 59
Query: 91 LLIE-----VDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
++ +D I+H AC A+ +++ + N + +L L S+
Sbjct: 60 IMAGDDFGFIDAIFHEGACSATT---EWDGKYVMLNNYEYSKELLHYCLDREIPFLYASS 116
Query: 145 SEVYGDPLIHPQPETYWGNVNPIGV-RSCYDEGKRVAETLMFDYHRQHG---IQIRIARI 200
+ YG+ + Y G +N G + +D R L D +QH QI R
Sbjct: 117 AATYGETDTFIEEPQYEGALNVYGYSKQQFDNYVR---RLWLDA-KQHDETLSQITGFRY 172
Query: 201 FNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKP----GTQT--RSFCYVSDMVDGLIRL 254
FN YGPR G + S +A L + + P G++ R F YV D+ +
Sbjct: 173 FNVYGPREQ-HKGSMAS--VAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWF 229
Query: 255 MEGENTGPVNIGNPGEFTMLELAETV 280
++ +G N G + E+A+ V
Sbjct: 230 LDHGVSGIFNCGTGKAESFNEVAKAV 255
>TIGR_CMR|VC_0240 [details] [associations]
symbol:VC_0240 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 HAMAP:MF_01601 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 UniPathway:UPA00958
InterPro:IPR016040 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0050661 GO:GO:0009244 EMBL:X59554
GO:GO:0097171 KO:K03274 OMA:AVNLWFW ProtClustDB:PRK11150
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547
EMBL:U47542 EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 67/266 (25%), Positives = 111/266 (41%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELI-RHDVTEP 90
I+VTGGAG IGS+++ L E +++V D+ G K K + + + R D
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRK--FKNLVDLQIADYMDRDDFLAQ 59
Query: 91 LLIE-----VDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
++ +D I+H AC A+ +++ + N + +L L S+
Sbjct: 60 IMAGDDFGFIDAIFHEGACSATT---EWDGKYVMLNNYEYSKELLHYCLDREIPFLYASS 116
Query: 145 SEVYGDPLIHPQPETYWGNVNPIGV-RSCYDEGKRVAETLMFDYHRQHG---IQIRIARI 200
+ YG+ + Y G +N G + +D R L D +QH QI R
Sbjct: 117 AATYGETDTFIEEPQYEGALNVYGYSKQQFDNYVR---RLWLDA-KQHDETLSQITGFRY 172
Query: 201 FNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKP----GTQT--RSFCYVSDMVDGLIRL 254
FN YGPR G + S +A L + + P G++ R F YV D+ +
Sbjct: 173 FNVYGPREQ-HKGSMAS--VAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWF 229
Query: 255 MEGENTGPVNIGNPGEFTMLELAETV 280
++ +G N G + E+A+ V
Sbjct: 230 LDHGVSGIFNCGTGKAESFNEVAKAV 255
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 114 (45.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 60/255 (23%), Positives = 101/255 (39%)
Query: 92 LIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRV----GARILL--TST 144
+I+ D++Y+LA S + + P T G L +L + G I +
Sbjct: 92 VIKPDEVYNLAAQ-SHVAVSFEIPDYTADVVATGALRLLEAVRSHNIDNGRAIKYYQAGS 150
Query: 145 SEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTY 204
SE++G PQ ET P RS Y K A +Y +G+ +FN
Sbjct: 151 SEMFGSTP-PPQSET-----TPFHPRSPYAASKCAAHWYTVNYREAYGLYACNGILFNHE 204
Query: 205 GPRMNIDD-GRVVSNFIAQALRGEPLTVQKPGTQ-TRSFCYVSDMVDGLIRLMEGENTGP 262
PR + R ++ + + G + Q +R + + D V+ + +++ E
Sbjct: 205 SPRRGENFVTRKITRALGRIKVGLQTKLFLGNIQASRDWGFAGDYVEAMWLMLQQEKPDD 264
Query: 263 VNIGNPGEFTMLELAETVKELINPG----IEIKMVENTPDDPRQRKPDISKAKELLGWEP 318
+ T+ E + + +EI P + K D SKAKE+LGW+P
Sbjct: 265 YVVATEESHTVKEFLDVSFGYVGLNWKDHVEIDKRYFRPTEVDNLKGDASKAKEMLGWKP 324
Query: 319 KVKLRDGLPLM-EED 332
KV + +M +ED
Sbjct: 325 KVGFEKLVKMMVDED 339
Score = 41 (19.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 33 LVTGGAGFIGSHLVDKLME 51
LVTG G GS+L + L+E
Sbjct: 20 LVTGITGQDGSYLTEFLLE 38
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 107 (42.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 62/264 (23%), Positives = 117/264 (44%)
Query: 33 LVTGGAGFIGSHLVDKLM-ENEKNEVIV--ADNYFTGSKDNL-KKWIGH---PRFELIRH 85
L+TG +G GS+L + L+ + K I+ + ++ T ++L I H F L
Sbjct: 54 LITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYG 113
Query: 86 DVTEP-----LL--IEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGL--AKRV 135
D+T+ L+ IE ++YHLA S + ++ P T + + +GTL +L A R+
Sbjct: 114 DMTDSSCLIKLISTIEPTEVYHLAAQ-SHVKVSFDLPEYTAEVDAVGTLRLLDAIHACRL 172
Query: 136 GARILL--TSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 193
++ STSE+YG PQ E P RS Y K ++ +Y + +
Sbjct: 173 TEKVRFYQASTSELYGKVQEIPQSEK-----TPFYPRSPYAVAKMYGYWIVVNYREAYNM 227
Query: 194 QIRIARIFNTYGPRMNIDD-GRVVSNFIAQALRGEPLTVQKPGTQT-RSFCYVSDMVDGL 251
+FN PR R ++ +A+ G+ +++ R + + + V+ +
Sbjct: 228 FACNGILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAM 287
Query: 252 IRLMEGENTGPVNIGNPGEFTMLE 275
R+++ ++ I +F++ E
Sbjct: 288 WRILQHDSPDDFVIATGKQFSVRE 311
Score = 50 (22.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 309 KAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKRN 343
KAK+ LGWE KV + + L++E S + + K N
Sbjct: 365 KAKKTLGWEAKVTVPE---LVKEMVASDIILMKSN 396
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 107 (42.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 62/264 (23%), Positives = 117/264 (44%)
Query: 33 LVTGGAGFIGSHLVDKLM-ENEKNEVIV--ADNYFTGSKDNL-KKWIGH---PRFELIRH 85
L+TG +G GS+L + L+ + K I+ + ++ T ++L I H F L
Sbjct: 54 LITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYG 113
Query: 86 DVTEP-----LL--IEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGL--AKRV 135
D+T+ L+ IE ++YHLA S + ++ P T + + +GTL +L A R+
Sbjct: 114 DMTDSSCLIKLISTIEPTEVYHLAAQ-SHVKVSFDLPEYTAEVDAVGTLRLLDAIHACRL 172
Query: 136 GARILL--TSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 193
++ STSE+YG PQ E P RS Y K ++ +Y + +
Sbjct: 173 TEKVRFYQASTSELYGKVQEIPQSEK-----TPFYPRSPYAVAKMYGYWIVVNYREAYNM 227
Query: 194 QIRIARIFNTYGPRMNIDD-GRVVSNFIAQALRGEPLTVQKPGTQT-RSFCYVSDMVDGL 251
+FN PR R ++ +A+ G+ +++ R + + + V+ +
Sbjct: 228 FACNGILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAM 287
Query: 252 IRLMEGENTGPVNIGNPGEFTMLE 275
R+++ ++ I +F++ E
Sbjct: 288 WRILQHDSPDDFVIATGKQFSVRE 311
Score = 50 (22.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 309 KAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKRN 343
KAK+ LGWE KV + + L++E S + + K N
Sbjct: 365 KAKKTLGWEAKVTVPE---LVKEMVASDIILMKSN 396
>TAIR|locus:2122093 [details] [associations]
symbol:DRL1 "dihydroflavonol 4-reductase-like1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048316 "seed
development" evidence=IMP] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0010584 "pollen exine formation" evidence=IMP]
[GO:0080110 "sporopollenin biosynthetic process" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005783
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0080110 GO:GO:0016491 GO:GO:0048316 EMBL:AL022604
EMBL:AL161587 UniGene:At.2276 UniGene:At.63750 HOGENOM:HOG000167998
EMBL:BT022119 EMBL:BT025661 IPI:IPI00531159 PIR:T06115
RefSeq:NP_195268.2 ProteinModelPortal:Q500U8 SMR:Q500U8
IntAct:Q500U8 PaxDb:Q500U8 PRIDE:Q500U8 EnsemblPlants:AT4G35420.1
GeneID:829695 KEGG:ath:AT4G35420 TAIR:At4g35420 InParanoid:Q500U8
OMA:GETEKFQ PhylomeDB:Q500U8 ProtClustDB:CLSN2680286
BioCyc:ARA:AT4G35420-MONOMER BioCyc:MetaCyc:AT4G35420-MONOMER
Genevestigator:Q500U8 Uniprot:Q500U8
Length = 326
Score = 115 (45.5 bits), Expect = 0.00041, P = 0.00041
Identities = 66/249 (26%), Positives = 108/249 (43%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVI--VADNYFTGSKDNLKKWIG-HPRFELI 83
Q+ ++ VTG +GF+ S LV +L+ E EVI V D +L K G R L+
Sbjct: 3 QAKGKVCVTGASGFLASWLVKRLLL-EGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRLV 61
Query: 84 RHDVTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVI-GTLNMLGLAKRVGA 137
+ D+ E ++ ++H A P + NP + I I GTLN+L ++ +
Sbjct: 62 KADLMEEGSFDNAIMGCQGVFHTASPV--LKPTSNPEEEILRPAIEGTLNVLRSCRKNPS 119
Query: 138 --RILLTSTSEVYG-----DPLIHPQPETYWGNVNPIG-VRSCYDEGKRVAETLMFDYHR 189
R++LTS+S DP I P E+ W +V + Y K +AE + +
Sbjct: 120 LKRVVLTSSSSTVRIRDDFDPKI-PLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSE 178
Query: 190 QHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVD 249
++GI + GP + D S+ + L+GE Q G + ++ D+
Sbjct: 179 ENGIDLVTVLPSFLVGPSLPPDLCSTASDVLG-LLKGETEKFQWHGQM--GYVHIDDVAR 235
Query: 250 GLIRLMEGE 258
I + E E
Sbjct: 236 THIVVFEHE 244
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 49/193 (25%), Positives = 88/193 (45%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFT----GSK--DNLKKW--IGHPRFEL 82
++LVTGGAG+IGSH V +L+E + V++ DN+ GS ++L++ + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVI-DNFHNAIRGGSSMPESLRRVQELTGRSVEF 62
Query: 83 IRHDVTEPLLIE-VDQIYHLACPASPIFYK------YNPVKTIKTNVIGTLNMLGLAKRV 135
D+ + ++ + + YH K P+ + N+ GT+ +L + K
Sbjct: 63 EEMDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 136 GAR-ILLTSTSEVYGDPLIHPQPETYWGNVNPIG-VRSCYDEGKRVAETLMFDY-HRQHG 192
G + ++ +S++ VYG+P P E + P G + Y + K E ++ D
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCQADKA 177
Query: 193 IQIRIARIFNTYG 205
+ R FN G
Sbjct: 178 WNAVLLRYFNPIG 190
>TAIR|locus:2123797 [details] [associations]
symbol:SQD1 "sulfoquinovosyldiacylglycerol 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0008146 "sulfotransferase
activity" evidence=IDA] [GO:0009247 "glycolipid biosynthetic
process" evidence=IDA] [GO:0046506 "sulfolipid biosynthetic
process" evidence=IDA] [GO:0046507 "UDPsulfoquinovose synthase
activity" evidence=IDA] [GO:0016036 "cellular response to phosphate
starvation" evidence=IEP;IMP;RCA] [GO:0008270 "zinc ion binding"
evidence=IDA] [GO:0019375 "galactolipid biosynthetic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0008270 GO:GO:0009247 GO:GO:0016036 EMBL:AL031804
EMBL:AL161582 GO:GO:0008146 EMBL:AF022082 EMBL:AF380641
EMBL:AY113071 IPI:IPI00524549 PIR:T05311 RefSeq:NP_195029.1
UniGene:At.2479 PDB:1I24 PDB:1I2B PDB:1I2C PDB:1QRR PDBsum:1I24
PDBsum:1I2B PDBsum:1I2C PDBsum:1QRR ProteinModelPortal:O48917
SMR:O48917 IntAct:O48917 STRING:O48917 PaxDb:O48917 PRIDE:O48917
ProMEX:O48917 EnsemblPlants:AT4G33030.1 GeneID:829440
KEGG:ath:AT4G33030 TAIR:At4g33030 HOGENOM:HOG000014371
InParanoid:O48917 KO:K06118 OMA:QMTETHR PhylomeDB:O48917
ProtClustDB:PLN02572 BioCyc:MetaCyc:MONOMER-1201
EvolutionaryTrace:O48917 Genevestigator:O48917 GermOnline:AT4G33030
GO:GO:0046507 Uniprot:O48917
Length = 477
Score = 88 (36.0 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 213 GRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL-IRLMEGENTGPVNIGNP--G 269
G ++ F QA G PLTV G QTR + + D V + I + G + N
Sbjct: 320 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTE 379
Query: 270 EFTMLELAETVKELINP-GIEIKMVENTPDDPR-QRKPDISKAKEL----LGWEPKVKLR 323
+F++ ELA V + + G+++K + T +PR + + AK LG EP L
Sbjct: 380 QFSVNELASLVTKAGSKLGLDVKKM--TVPNPRVEAEEHYYNAKHTKLMELGLEPHY-LS 436
Query: 324 DGL 326
D L
Sbjct: 437 DSL 439
Score = 60 (26.2 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 94 EVDQIYHL----ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARILLTSTSEV 147
E D + H + P S I + V T NVIGTLN+L K G ++ T
Sbjct: 173 EPDSVVHFGEQRSAPYSMID-RSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGE 231
Query: 148 YGDPLI 153
YG P I
Sbjct: 232 YGTPNI 237
Score = 48 (22.0 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKN-EVIVADN 62
R++V GG G+ G L ++KN EV + DN
Sbjct: 86 RVMVIGGDGYCG--WATALHLSKKNYEVCIVDN 116
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 120 (47.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 51/190 (26%), Positives = 86/190 (45%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKK--WIGHPRFELIRHDVT- 88
ILVTGGAG+IGSH V +L+ N +VI+ DN D + + +I + + D+
Sbjct: 8 ILVTGGAGYIGSHTVIELI-NHGYKVIIVDNLCNSCYDAVARVEFIVRKSIKFFKLDLRD 66
Query: 89 -EPLL-----IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILL 141
E L ++ + H A + P++ N+ GT+ +L + + + ++
Sbjct: 67 KEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVKTVVF 126
Query: 142 TSTSEVYGDPL----IHPQPETYWGN-VNPIGVRSCYDEGKRVAETLMFDYHRQHGI-QI 195
+S++ VYGD + P PE+ + NP Y + K E ++ D H +
Sbjct: 127 SSSATVYGDATRFDNMIPIPESCPNDPTNP------YGKTKYAIENIIKDLHTSDNTWRG 180
Query: 196 RIARIFNTYG 205
I R FN G
Sbjct: 181 AILRYFNPIG 190
Score = 41 (19.5 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 6/21 (28%), Positives = 15/21 (71%)
Query: 278 ETVKELINPGIEIKMVENTPD 298
+ + E+I+P + +K+V +T +
Sbjct: 612 KNIVEVIHPSVPVKLVVSTTE 632
>UNIPROTKB|Q4K8N6 [details] [associations]
symbol:wbpM "Nucleotide sugar epimerase/dehydratase WbpM"
species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0000271 GO:GO:0016857
eggNOG:COG1086 HOGENOM:HOG000257078 OMA:HVPMVEH RefSeq:YP_261397.1
ProteinModelPortal:Q4K8N6 STRING:Q4K8N6 GeneID:3478429
KEGG:pfl:PFL_4305 PATRIC:19878030 ProtClustDB:CLSK867780
BioCyc:PFLU220664:GIX8-4340-MONOMER Uniprot:Q4K8N6
Length = 664
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 73/287 (25%), Positives = 117/287 (40%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVAD----NYFTGSKDNLKKWIGHPRF-EL--IR 84
+LVTG G IGS L +++ + +I+ D N ++ + ++ R +L I
Sbjct: 300 VLVTGAGGSIGSELCRQILLQGPSTLILLDHSEFNLYSILSELEQRVSRESRLVKLLPIL 359
Query: 85 HDVT--EPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG- 136
V E LL VD +YH A ++N + + NV+GTLN A + G
Sbjct: 360 GSVRNYEKLLSVMRTWSVDTVYHAAAYKHVPMVEHNIAEGVLNNVMGTLNTAQAALQCGV 419
Query: 137 ARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYH---RQHGI 193
A +L ST + +P G+ + + K +A L D R +
Sbjct: 420 ANFVLISTDKAV-------RPTNVMGSTKRLAELTLQALSKELAPVLFDDLSNVSRVNKT 472
Query: 194 QIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
+ + R N G G V+ F Q G PLTV P TR F + + +I+
Sbjct: 473 RFTMVRFGNVLG-----SSGSVIPLFHKQIKSGGPLTVTHPKI-TRYFMTIPEAAQLVIQ 526
Query: 254 LMEGENTGPVNIGNPGE-FTMLELAETVKELINPGIEIKMVENTPDD 299
G V + + GE ++ELAE + L G+ ++ +N D
Sbjct: 527 AGSMGQGGDVFVLDMGEPVRIVELAEKMIHL--SGLSVRSEKNPHGD 571
>ZFIN|ZDB-GENE-050417-163 [details] [associations]
symbol:nsdhl "NAD(P) dependent steroid
dehydrogenase-like" species:7955 "Danio rerio" [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-050417-163 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 KO:K07748 CTD:50814 HOVERGEN:HBG054675 EMBL:BC093332
IPI:IPI00570211 RefSeq:NP_001017674.1 UniGene:Dr.84494
ProteinModelPortal:Q566U2 STRING:Q566U2 GeneID:550369
KEGG:dre:550369 InParanoid:Q566U2 NextBio:20879621
ArrayExpress:Q566U2 Uniprot:Q566U2
Length = 345
Score = 115 (45.5 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 57/238 (23%), Positives = 103/238 (43%)
Query: 28 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDV 87
S+ R V GG+GF+G HLV++L+ D +T + ++++ P + D+
Sbjct: 8 SSKRCTVIGGSGFLGRHLVERLV----------DRGYTVNVFDIRQAYELPGVTFYQGDL 57
Query: 88 TEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 141
+ L + EV ++H A PA + + N+ GT ++ G +++L
Sbjct: 58 CDKLALVMALKEVSIVFHCASPAPG---SDDGALFQRVNIDGTRTVIQACHEAGVQKLIL 114
Query: 142 TSTSEVY--GDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDY-HRQHGIQIRIA 198
TS++ V G + + + + + PI Y E K E L+ + ++ G
Sbjct: 115 TSSASVVFEGTDIKNGKEDLPYAK-KPIDY---YTETKIKQEKLVLEACSKEKGFLTVAI 170
Query: 199 RIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
R +GPR D ++V + A RG+ + G+ F YV ++V G I E
Sbjct: 171 RPHGIFGPR----DPQLVPILVDTARRGKMKFIIGDGSNLVDFTYVENVVHGHILAAE 224
Score = 37 (18.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 308 SKAKELLGWEPKVKLRDGLPLMEEDF 333
++AK+ +G+ P V L++ + E +
Sbjct: 313 ARAKQDMGYRPLVPLQEAVVRTVESY 338
>FB|FBgn0036698 [details] [associations]
symbol:CG7724 species:7227 "Drosophila melanogaster"
[GO:0016614 "oxidoreductase activity, acting on CH-OH group of
donors" evidence=ISS] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
EMBL:AE014296 eggNOG:COG0451 KO:K00070 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 OMA:WVFPRIA
GeneTree:ENSGT00550000074557 EMBL:AY069197 RefSeq:NP_648957.1
UniGene:Dm.7711 SMR:Q9VVE3 IntAct:Q9VVE3 MINT:MINT-971239
EnsemblMetazoa:FBtr0075284 GeneID:39918 KEGG:dme:Dmel_CG7724
UCSC:CG7724-RA FlyBase:FBgn0036698 InParanoid:Q9VVE3
OrthoDB:EOG4Z34W5 GenomeRNAi:39918 NextBio:816080 Uniprot:Q9VVE3
Length = 398
Score = 114 (45.2 bits), Expect = 0.00076, P = 0.00076
Identities = 43/129 (33%), Positives = 66/129 (51%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNL--KKWIGHPRFELIRHDVTE 89
+LVTGG+GF+G HL+ +L+E K E+ + + S D + K IGH L+R V +
Sbjct: 9 LLVTGGSGFLGQHLIKQLLER-KEELGIKE---IRSLDIVPYKNNIGHEETSLLRTYVAD 64
Query: 90 ---------PLLIEVDQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-R 138
P+ VD ++H C AS I Y N + + NV GTL ++ L + R
Sbjct: 65 IGGDLKALSPIFNGVDGVFH--CAASVKIEYPPNYEELERVNVNGTLAVVDLCIQNNVKR 122
Query: 139 ILLTSTSEV 147
++ TS + V
Sbjct: 123 LVYTSCTSV 131
>UNIPROTKB|I3LIF3 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PCGLRLV EMBL:CU914342
Ensembl:ENSSSCT00000029053 Uniprot:I3LIF3
Length = 363
Score = 113 (44.8 bits), Expect = 0.00084, P = 0.00084
Identities = 63/230 (27%), Positives = 101/230 (43%)
Query: 33 LVTGGAGFIGSHLVDKLMENEKN--EVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEP 90
LVTGG GF+G H+V L++ E E+ V D + + L+ G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQQEPRLCELRVFDLHLGPWLEELET--GPVQVTAIQGDVTQA 70
Query: 91 -----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TST 144
+ + H A +F + +P + NV GT N++ + G R L+ TS+
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGRASPETIHEVNVQGTQNVIEACVQNGTRFLVYTSS 129
Query: 145 SEVYGDPLIHPQPETYWGNVN-PIGV--RSCYDEGKRVAETLMFDYHRQHGIQIR--IAR 199
EV G P T GN N P R Y K +AE L+ + +G ++R +
Sbjct: 130 MEVVG-------PTTR-GNENTPYEAAHRHPYPRSKALAERLVLE---ANGRKVRGGLPL 178
Query: 200 IFNTYGPRMNIDDG-RVVSNFIAQALR-GEPLTVQKPGTQTRSFCYVSDM 247
+ P +G +++ +F Q LR G L P + YV ++
Sbjct: 179 VTCALRPTGIYGEGHQIMKDFYHQGLRLGGRLLRAIPASVEHGRVYVGNV 228
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 107 (42.7 bits), Expect = 0.00087, P = 0.00087
Identities = 40/146 (27%), Positives = 72/146 (49%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNY---FTGS---KDNLKK---WIGHP-RF 80
++LVTGGAG+IGSH V +L+E V++ DN+ F G ++L++ G F
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVI-DNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 81 E---LIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 135
E ++ + L + + H A + P+ + N+ GT+ +L + K
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 136 GAR-ILLTSTSEVYGDPLIHPQPETY 160
G + ++ +S++ VYG+P P E +
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH 148
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 107 (42.7 bits), Expect = 0.00089, P = 0.00089
Identities = 40/146 (27%), Positives = 72/146 (49%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNY---FTGS---KDNLKK---WIGHP-RF 80
++LVTGGAG+IGSH V +L+E V++ DN+ F G ++L++ G F
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVI-DNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 81 E---LIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 135
E ++ + L + + H A + P+ + N+ GT+ +L + K
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 136 GAR-ILLTSTSEVYGDPLIHPQPETY 160
G + ++ +S++ VYG+P P E +
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH 148
>UNIPROTKB|Q3Z6W4 [details] [associations]
symbol:DET1324 "Putative uncharacterized protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0702 KO:K00356
HOGENOM:HOG000168008 KO:K00329 OMA:VKRFIHM RefSeq:YP_182035.1
ProteinModelPortal:Q3Z6W4 STRING:Q3Z6W4 GeneID:3229421
KEGG:det:DET1324 PATRIC:21609677 ProtClustDB:CLSK935576
BioCyc:DETH243164:GJNF-1325-MONOMER Uniprot:Q3Z6W4
Length = 302
Score = 94 (38.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 31 RILVTGGAGFIGSHLVDKLMENE-KNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE 89
R+ V+GG+GF+G HL+ +L EN K ++V + + K + P E + V +
Sbjct: 4 RVFVSGGSGFVGGHLLPRLAENGFKIRLLVMN-------EAEAKRVKTPGVEFVYGTVND 56
Query: 90 -PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
P+L+E + I + + K N+ GT NML A + G +
Sbjct: 57 LPVLMESMKDIFAVIHLVAILRENKDITFEKVNIEGTKNMLAAADQNGVK 106
Score = 57 (25.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 21/80 (26%), Positives = 36/80 (45%)
Query: 206 PRMNIDDGRVVSNFIAQALRGEPLTVQKPGT-QTR-SFCYVSDMVDGLIRLMEGENTGP- 262
P + G + ++ + PL G +TR +V D+V L+++++GE
Sbjct: 147 PSVMFGQGAGFITALIRSFKPYPLLAPVAGNGKTRLQPIWVEDVVSCLLKMLDGEKIHQS 206
Query: 263 VNIGNPGEFTMLELAETVKE 282
V IG P FT E+ V +
Sbjct: 207 VQIGGPRIFTYDEVLLAVMQ 226
>TIGR_CMR|DET_1324 [details] [associations]
symbol:DET_1324 "conserved hypothetical protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0702 KO:K00356
HOGENOM:HOG000168008 KO:K00329 OMA:VKRFIHM RefSeq:YP_182035.1
ProteinModelPortal:Q3Z6W4 STRING:Q3Z6W4 GeneID:3229421
KEGG:det:DET1324 PATRIC:21609677 ProtClustDB:CLSK935576
BioCyc:DETH243164:GJNF-1325-MONOMER Uniprot:Q3Z6W4
Length = 302
Score = 94 (38.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 31 RILVTGGAGFIGSHLVDKLMENE-KNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE 89
R+ V+GG+GF+G HL+ +L EN K ++V + + K + P E + V +
Sbjct: 4 RVFVSGGSGFVGGHLLPRLAENGFKIRLLVMN-------EAEAKRVKTPGVEFVYGTVND 56
Query: 90 -PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 138
P+L+E + I + + K N+ GT NML A + G +
Sbjct: 57 LPVLMESMKDIFAVIHLVAILRENKDITFEKVNIEGTKNMLAAADQNGVK 106
Score = 57 (25.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 21/80 (26%), Positives = 36/80 (45%)
Query: 206 PRMNIDDGRVVSNFIAQALRGEPLTVQKPGT-QTR-SFCYVSDMVDGLIRLMEGENTGP- 262
P + G + ++ + PL G +TR +V D+V L+++++GE
Sbjct: 147 PSVMFGQGAGFITALIRSFKPYPLLAPVAGNGKTRLQPIWVEDVVSCLLKMLDGEKIHQS 206
Query: 263 VNIGNPGEFTMLELAETVKE 282
V IG P FT E+ V +
Sbjct: 207 VQIGGPRIFTYDEVLLAVMQ 226
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.139 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 343 325 0.00087 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 216
No. of states in DFA: 602 (64 KB)
Total size of DFA: 221 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.10u 0.10s 26.20t Elapsed: 00:00:01
Total cpu time: 26.15u 0.10s 26.25t Elapsed: 00:00:01
Start: Sat May 11 09:08:48 2013 End: Sat May 11 09:08:49 2013
WARNINGS ISSUED: 1