BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019310
(343 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3O08|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O08|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O1B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Ii
pdb|3O1W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O1W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O4W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O4W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O5B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O5B|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O6W|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O6W|B Chain B, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O80|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Ix
(Open State)
pdb|3O8M|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Xi
With Glucose Bound (Closed State)
Length = 485
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 148/265 (55%), Gaps = 12/265 (4%)
Query: 54 KLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQ 113
K+R + E+ GL+ +GG+ + M+ +V PTG E G F ALDLGGTN RV+ V+
Sbjct: 40 KMRSIVKHFISELDKGLSKKGGN-IPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVLVK 98
Query: 114 LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173
LGG Q + +P HL TG+S +L+ +IA L +FV E + LG
Sbjct: 99 LGGNHDFDTTQN--KYRLPDHLRTGTSEQLWSFIAKCLKEFV---DEWYPDGVSEPLPLG 153
Query: 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIG 233
FTFS+P Q I SG L +WTKGF IE G DVV L + +E++ + + V AL+NDT G
Sbjct: 154 FTFSYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTG 213
Query: 234 TLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPK----SGEMVINMEWGNFR 289
TL Y + +I+GTG N AY + I K GLLP+ M IN E+G+F
Sbjct: 214 TLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSFD 273
Query: 290 SSH--LPLTEYDEALDTESLNPGEQ 312
+ H LP T+YD +D ES PG+Q
Sbjct: 274 NEHLVLPRTKYDVIIDEESPRPGQQ 298
>pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
pdb|1BG3|B Chain B, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
Length = 918
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/264 (41%), Positives = 147/264 (55%), Gaps = 14/264 (5%)
Query: 55 LRQVADAMTVEMHAGLASEGGSK--LKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L +V + EM GL E SK +KML S+V ++P G E G F ALDLGGTNFRVL V
Sbjct: 484 LMEVKKRLRTEMEMGLRKETNSKATVKMLPSFVRSIPDGTEHGDFLALDLGGTNFRVLLV 543
Query: 113 QLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172
++ + R V+ + SIP +M G+ ELFD+I + ++ F+ G G + L
Sbjct: 544 KIRSGKKRTVEMHNKIYSIPLEIMQGTGDELFDHIVSCISDFLDYMG-----IKGPRMPL 598
Query: 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDT 231
GFTFSFP QT++ G LI WTKGF D G DV L A++R D+ V A+VNDT
Sbjct: 599 GFTFSFPCHQTNLDCGILISWTKGFKATDCEGHDVASLLRDAVKRREEFDLDVVAVVNDT 658
Query: 232 IGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSS 291
+GT+ Y +I+GTGTNA Y+E + G G+M INMEWG F +
Sbjct: 659 VGTMMTCAYEEPTCEIGLIVGTGTNACYMEEMKNVEMVEG---NQGQMCINMEWGAFGDN 715
Query: 292 HL---PLTEYDEALDTESLNPGEQ 312
T++D+ +D SLN G+Q
Sbjct: 716 GCLDDIRTDFDKVVDEYSLNSGKQ 739
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 142/255 (55%), Gaps = 14/255 (5%)
Query: 65 EMHAGLASEGG--SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVV 122
EM GL+ + + +KML ++V ++P G EKG F ALDLGG++FR+LRVQ+ + + V
Sbjct: 46 EMKNGLSRDYNPTASVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNV 105
Query: 123 KQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQ 182
E E P +++ GS +LFD++A L F+ + P +GFTFSFP RQ
Sbjct: 106 SMESEIYDTPENIVHGSGTQLFDHVADCLGDFMEKKKIKDKKLP-----VGFTFSFPCRQ 160
Query: 183 TSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYH 241
+ I LI WTK F G DVV L KA+++ G D + A+VNDT+GT+ Y
Sbjct: 161 SKIDEAVLITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD 220
Query: 242 NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF---RSSHLPLTEY 298
++ +I+GTGTNA Y+E I G G M IN EWG F S TE+
Sbjct: 221 DQQCEVGLIIGTGTNACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEF 277
Query: 299 DEALDTESLNPGEQV 313
D LD SLNPG+Q+
Sbjct: 278 DRELDRGSLNPGKQL 292
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I
Complexed With Glucose, Glucose-6-Phosphate, And Adp
Length = 917
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/264 (41%), Positives = 146/264 (55%), Gaps = 14/264 (5%)
Query: 55 LRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L +V M EM GL + + +KML S+V P G E G F ALDLGGTNFRVL V
Sbjct: 484 LLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLV 543
Query: 113 QLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172
++ + R V+ + +IP +M G+ ELFD+I + ++ F+ G G + L
Sbjct: 544 KIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMG-----IKGPRMPL 598
Query: 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDT 231
GFTFSFP +QTS+ +G LI WTKGF D VG DVV L A++R D+ V A+VNDT
Sbjct: 599 GFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDT 658
Query: 232 IGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSS 291
+GT+ Y +I+GTG+NA Y+E + G G+M INMEWG F +
Sbjct: 659 VGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDN 715
Query: 292 HL---PLTEYDEALDTESLNPGEQ 312
T YD +D SLN G+Q
Sbjct: 716 GCLDDIRTHYDRLVDEYSLNAGKQ 739
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 143/255 (56%), Gaps = 14/255 (5%)
Query: 65 EMHAGLASEGG--SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVV 122
EM GL+ + + +KML ++V ++P G EKG F ALDLGG++FR+LRVQ+ + + V
Sbjct: 46 EMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNV 105
Query: 123 KQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQ 182
E E P +++ GS +LFD++A L F+ ++ +GFTFSFP +Q
Sbjct: 106 HMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRK-----IKDKKLPVGFTFSFPCQQ 160
Query: 183 TSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYH 241
+ I LI WTK F G DVV L KA+++ G D + A+VNDT+GT+ Y
Sbjct: 161 SKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD 220
Query: 242 NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF---RSSHLPLTEY 298
++ +I+GTGTNA Y+E I G G M IN EWG F S TE+
Sbjct: 221 DQHCEVGLIIGTGTNACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEF 277
Query: 299 DEALDTESLNPGEQV 313
D A+D SLNPG+Q+
Sbjct: 278 DRAIDAYSLNPGKQL 292
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
pdb|1HKB|B Chain B, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
Length = 917
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/264 (41%), Positives = 146/264 (55%), Gaps = 14/264 (5%)
Query: 55 LRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L +V M EM GL + + +KML S+V P G E G F ALDLGGTNFRVL V
Sbjct: 484 LLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLV 543
Query: 113 QLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172
++ + R V+ + +IP +M G+ ELFD+I + ++ F+ G G + L
Sbjct: 544 KIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMG-----IKGPRMPL 598
Query: 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDT 231
GFTFSFP +QTS+ +G LI WTKGF D VG DVV L A++R D+ V A+VNDT
Sbjct: 599 GFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDT 658
Query: 232 IGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSS 291
+GT+ Y +I+GTG+NA Y+E + G G+M INMEWG F +
Sbjct: 659 VGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDN 715
Query: 292 HL---PLTEYDEALDTESLNPGEQ 312
T YD +D SLN G+Q
Sbjct: 716 GCLDDIRTHYDRLVDEYSLNAGKQ 739
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 142/255 (55%), Gaps = 14/255 (5%)
Query: 65 EMHAGLASEGG--SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVV 122
EM GL+ + + +KML ++V ++P G EKG F ALDLGG++FR+LRVQ+ + + V
Sbjct: 46 EMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNV 105
Query: 123 KQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQ 182
E E P +++ GS +LFD++A L F+ ++ +GFTFSFP +Q
Sbjct: 106 HMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRK-----IKDKKLPVGFTFSFPCQQ 160
Query: 183 TSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYH 241
+ I LI WTK F G DVV L KA+++ G D + A+VNDT+GT+ Y
Sbjct: 161 SKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD 220
Query: 242 NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF---RSSHLPLTEY 298
++ +I+GTGTNA Y+E I G G M IN EWG F S TE+
Sbjct: 221 DQHCEVGLIIGTGTNACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEF 277
Query: 299 DEALDTESLNPGEQV 313
D +D SLNPG+Q+
Sbjct: 278 DREIDRGSLNPGKQL 292
>pdb|4DCH|A Chain A, Insights Into Glucokinase Activation Mechanism:
Observation Of Multiple Distinct Protein Conformations
Length = 473
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 55 LRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L++V M EM GL E + +KML +YV + P G E G F +LDLGGTNFRV+ V
Sbjct: 30 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 89
Query: 113 QLG-GREGR-VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170
++G G EG+ VK + + SIP MTG++ LFDYI+ ++ F+ H ++
Sbjct: 90 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 144
Query: 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVN 229
LGFTFSFPVR I G L+ WTKGF G +VVG L A++R G +M V A+VN
Sbjct: 145 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 204
Query: 230 DTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF- 288
DT+ T+ Y + +I+GTG NA Y+E + G G M +N EWG F
Sbjct: 205 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFG 261
Query: 289 RSSHLP--LTEYDEALDTESLNPGEQV 313
S L L EYD +D S NPG+Q+
Sbjct: 262 DSGELDEFLLEYDRLVDESSANPGQQL 288
>pdb|3F9M|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose And
Activator Showing A Mobile Flap
pdb|3FGU|A Chain A, Catalytic Complex Of Human Glucokinase
pdb|3ID8|A Chain A, Ternary Complex Of Human Pancreatic Glucokinase
Crystallized With Activator, Glucose And Amp-Pnp
pdb|3IDH|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose
pdb|3VEV|A Chain A, Glucokinase In Complex With An Activator And Glucose
pdb|3VF6|A Chain A, Glucokinase In Complex With Glucose And Activator
Length = 470
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 55 LRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L++V M EM GL E + +KML +YV + P G E G F +LDLGGTNFRV+ V
Sbjct: 35 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 94
Query: 113 QLG-GREGR-VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170
++G G EG+ VK + + SIP MTG++ LFDYI+ ++ F+ H ++
Sbjct: 95 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 149
Query: 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVN 229
LGFTFSFPVR I G L+ WTKGF G +VVG L A++R G +M V A+VN
Sbjct: 150 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 209
Query: 230 DTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF- 288
DT+ T+ Y + +I+GTG NA Y+E + G G M +N EWG F
Sbjct: 210 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFG 266
Query: 289 RSSHLP--LTEYDEALDTESLNPGEQV 313
S L L EYD +D S NPG+Q+
Sbjct: 267 DSGELDEFLLEYDRLVDESSANPGQQL 293
>pdb|3QIC|A Chain A, The Structure Of Human Glucokinase E339k Mutation
Length = 470
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 55 LRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L++V M EM GL E + +KML +YV + P G E G F +LDLGGTNFRV+ V
Sbjct: 35 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 94
Query: 113 QLG-GREGR-VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170
++G G EG+ VK + + SIP MTG++ LFDYI+ ++ F+ H ++
Sbjct: 95 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 149
Query: 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVN 229
LGFTFSFPVR I G L+ WTKGF G +VVG L A++R G +M V A+VN
Sbjct: 150 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 209
Query: 230 DTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF- 288
DT+ T+ Y + +I+GTG NA Y+E + G G M +N EWG F
Sbjct: 210 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFG 266
Query: 289 RSSHLP--LTEYDEALDTESLNPGEQV 313
S L L EYD +D S NPG+Q+
Sbjct: 267 DSGELDEFLLEYDRLVDESSANPGQQL 293
>pdb|3S41|A Chain A, Glucokinase In Complex With Activator And Glucose
pdb|4DHY|A Chain A, Crystal Structure Of Human Glucokinase In Complex With
Glucose And Activator
Length = 469
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 55 LRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L++V M EM GL E + +KML +YV + P G E G F +LDLGGTNFRV+ V
Sbjct: 34 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 93
Query: 113 QLG-GREGR-VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170
++G G EG+ VK + + SIP MTG++ LFDYI+ ++ F+ H ++
Sbjct: 94 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 148
Query: 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVN 229
LGFTFSFPVR I G L+ WTKGF G +VVG L A++R G +M V A+VN
Sbjct: 149 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 208
Query: 230 DTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF- 288
DT+ T+ Y + +I+GTG NA Y+E + G G M +N EWG F
Sbjct: 209 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFG 265
Query: 289 RSSHLP--LTEYDEALDTESLNPGEQV 313
S L L EYD +D S NPG+Q+
Sbjct: 266 DSGELDEFLLEYDRLVDESSANPGQQL 292
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose
And Phosphate
pdb|1QHA|A Chain A, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
pdb|1QHA|B Chain B, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
Length = 917
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/264 (40%), Positives = 146/264 (55%), Gaps = 14/264 (5%)
Query: 55 LRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L +V M EM GL + + +KML S+V P G E G F ALDLGGTNFRVL V
Sbjct: 484 LLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLV 543
Query: 113 QLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172
++ + R V+ + +IP +M G+ ELFD+I + ++ F+ G G + L
Sbjct: 544 KIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMG-----IKGPRMPL 598
Query: 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDT 231
GFTFSFP +QTS+ +G LI WTKGF D VG DVV L A++R D+ V A+VNDT
Sbjct: 599 GFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDT 658
Query: 232 IGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSS 291
+GT+ Y +I+GTG+NA Y+E + G G+M INMEWG F +
Sbjct: 659 VGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDN 715
Query: 292 HL---PLTEYDEALDTESLNPGEQ 312
T YD ++ SLN G+Q
Sbjct: 716 GCLDDIRTHYDRLVNEYSLNAGKQ 739
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 142/255 (55%), Gaps = 14/255 (5%)
Query: 65 EMHAGLASEGG--SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVV 122
EM GL+ + + +KML ++V ++P G EKG F ALDLGG++FR+LRVQ+ + + V
Sbjct: 46 EMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNV 105
Query: 123 KQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQ 182
E E P +++ GS +LFD++A L F+ ++ +GFTFSFP +Q
Sbjct: 106 HMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRK-----IKDKKLPVGFTFSFPCQQ 160
Query: 183 TSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYH 241
+ I LI WTK F G DVV L KA+++ G D + A+VNDT+GT+ Y
Sbjct: 161 SKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD 220
Query: 242 NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF---RSSHLPLTEY 298
++ +I+GTGTNA Y+E I G G M IN EWG F S TE+
Sbjct: 221 DQHCEVGLIIGTGTNACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEF 277
Query: 299 DEALDTESLNPGEQV 313
D +D SLNPG+Q+
Sbjct: 278 DREIDRGSLNPGKQL 292
>pdb|1V4S|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3VEY|A Chain A, Glucokinase In Complex With Glucose And Atpgs
Length = 455
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 55 LRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L++V M EM GL E + +KML +YV + P G E G F +LDLGGTNFRV+ V
Sbjct: 20 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 79
Query: 113 QLG-GREGR-VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170
++G G EG+ VK + + SIP MTG++ LFDYI+ ++ F+ H ++
Sbjct: 80 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 134
Query: 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVN 229
LGFTFSFPVR I G L+ WTKGF G +VVG L A++R G +M V A+VN
Sbjct: 135 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 194
Query: 230 DTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF- 288
DT+ T+ Y + +I+GTG NA Y+E + G G M +N EWG F
Sbjct: 195 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFG 251
Query: 289 RSSHLP--LTEYDEALDTESLNPGEQV 313
S L L EYD +D S NPG+Q+
Sbjct: 252 DSGELDEFLLEYDRLVDESSANPGQQL 278
>pdb|1V4T|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3H1V|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
Length = 451
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 55 LRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L++V M EM GL E + +KML +YV + P G E G F +LDLGGTNFRV+ V
Sbjct: 16 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 75
Query: 113 QLG-GREGR-VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170
++G G EG+ VK + + SIP MTG++ LFDYI+ ++ F+ H ++
Sbjct: 76 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 130
Query: 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVN 229
LGFTFSFPVR I G L+ WTKGF G +VVG L A++R G +M V A+VN
Sbjct: 131 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 190
Query: 230 DTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF- 288
DT+ T+ Y + +I+GTG NA Y+E + G G M +N EWG F
Sbjct: 191 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFG 247
Query: 289 RSSHLP--LTEYDEALDTESLNPGEQV 313
S L L EYD +D S NPG+Q+
Sbjct: 248 DSGELDEFLLEYDRLVDESSANPGQQL 274
>pdb|3FR0|A Chain A, Human Glucokinase In Complex With 2-Amino Benzamide
Activator
pdb|3A0I|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
pdb|3GOI|A Chain A, Human Glucokinase In Complex With A Synthetic Activator
Length = 455
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 55 LRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L++V M EM GL E + +KML +YV + P G E G F +LDLGGTNFRV+ V
Sbjct: 20 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 79
Query: 113 QLG-GREGR-VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170
++G G EG+ VK + + SIP MTG++ LFDYI+ ++ F+ H ++
Sbjct: 80 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 134
Query: 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVN 229
LGFTFSFPVR I G L+ WTKGF G +VVG L A++R G +M V A+VN
Sbjct: 135 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 194
Query: 230 DTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF- 288
DT+ T+ Y + +I+GTG NA Y+E + G G M +N EWG F
Sbjct: 195 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFG 251
Query: 289 RSSHLP--LTEYDEALDTESLNPGEQV 313
S L L EYD +D S NPG+Q+
Sbjct: 252 DSGELDEFLLEYDRLVDESSANPGQQL 278
>pdb|3IMX|A Chain A, Crystal Structure Of Human Glucokinase In Complex With A
Synthetic Activator
Length = 455
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 55 LRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L++V M EM GL E + +KML +YV + P G E G F +LDLGGTNFRV+ V
Sbjct: 20 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 79
Query: 113 QLG-GREGR-VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170
++G G EG+ VK + + SIP MTG++ LFDYI+ ++ F+ H ++
Sbjct: 80 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 134
Query: 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVN 229
LGFTFSFPVR I G L+ WTKGF G +VVG L A++R G +M V A+VN
Sbjct: 135 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 194
Query: 230 DTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF- 288
DT+ T+ Y + +I+GTG NA Y+E + G G M +N EWG F
Sbjct: 195 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFG 251
Query: 289 RSSHLP--LTEYDEALDTESLNPGEQV 313
S L L EYD +D S NPG+Q+
Sbjct: 252 DSGELDEFLLEYDRLVDESSANPGQQL 278
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With
Glucose And Adp In The Active Site
Length = 917
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/264 (40%), Positives = 145/264 (54%), Gaps = 14/264 (5%)
Query: 55 LRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L +V M EM GL + + +KML S+V P G E G F ALDLGG NFRVL V
Sbjct: 484 LLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGANFRVLLV 543
Query: 113 QLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172
++ + R V+ + +IP +M G+ ELFD+I + ++ F+ G G + L
Sbjct: 544 KIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMG-----IKGPRMPL 598
Query: 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDT 231
GFTFSFP +QTS+ +G LI WTKGF D VG DVV L A++R D+ V A+VNDT
Sbjct: 599 GFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDT 658
Query: 232 IGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSS 291
+GT+ Y +I+GTG+NA Y+E + G G+M INMEWG F +
Sbjct: 659 VGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDN 715
Query: 292 HL---PLTEYDEALDTESLNPGEQ 312
T YD +D SLN G+Q
Sbjct: 716 GCLDDIRTHYDRLVDEYSLNAGKQ 739
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 143/255 (56%), Gaps = 14/255 (5%)
Query: 65 EMHAGLASEGG--SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVV 122
EM GL+ + + +KML ++V ++P G EKG F ALDLGG++FR+LRVQ+ + + V
Sbjct: 46 EMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNV 105
Query: 123 KQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQ 182
E E P +++ GS +LFD++A L F+ ++ +GFTFSFP +Q
Sbjct: 106 HMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRK-----IKDKKLPVGFTFSFPCQQ 160
Query: 183 TSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYH 241
+ I LI WTK F G DVV L KA+++ G D + A+VNDT+GT+ Y
Sbjct: 161 SKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD 220
Query: 242 NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF---RSSHLPLTEY 298
++ +I+GTGTNA Y+E I G G M IN EWG F S TE+
Sbjct: 221 DQHCEVGLIIGTGTNACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEF 277
Query: 299 DEALDTESLNPGEQV 313
D A+D SLNPG+Q+
Sbjct: 278 DRAIDAYSLNPGKQL 292
>pdb|1BDG|A Chain A, Hexokinase From Schistosoma Mansoni Complexed With Glucose
Length = 451
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 156/285 (54%), Gaps = 17/285 (5%)
Query: 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGL--ASEGGSKLKMLISYVDNLPTG 91
+ + V ILK + + ++ D M M GL ++ S +KM SYV P G
Sbjct: 9 FEKVVEILKPFD----LSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNG 64
Query: 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAAL 151
E G F ALDLGGTN+RVL V L G+ G+ + + IP M+GS ELF YIA L
Sbjct: 65 TETGNFLALDLGGTNYRVLSVTLEGK-GKSPRIQERTYCIPAEKMSGSGTELFKYIAETL 123
Query: 152 AKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGEL 211
A F+ G ++ +LGFTFSFP Q + L++WTKGFS + G +V L
Sbjct: 124 ADFLENNG-----MKDKKFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELL 178
Query: 212 TKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG 271
+++ L+++ A+VNDT+GTLA + +I+GTGTN AY+E + + G
Sbjct: 179 QTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDG 238
Query: 272 LLPKSGEMVINMEWGNF-RSSHLPL--TEYDEALDTESLNPGEQV 313
+ K E+VIN EWG F L T++D+++D +SL+PG+Q+
Sbjct: 239 V--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQL 281
>pdb|2NZT|A Chain A, Crystal Structure Of Human Hexokinase Ii
pdb|2NZT|B Chain B, Crystal Structure Of Human Hexokinase Ii
Length = 902
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 148/265 (55%), Gaps = 14/265 (5%)
Query: 54 KLRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLR 111
+L +V M VEM GL+ E + +KML +YV P G EKG F ALDLGGTNFRVL
Sbjct: 469 QLLEVKRRMKVEMERGLSKETHASAPVKMLPTYVCATPDGTEKGDFLALDLGGTNFRVLL 528
Query: 112 VQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171
V++ + V+ + +IP +M G+ ELFD+I +A F+ G G
Sbjct: 529 VRVRNGKWGGVEMHNKIYAIPQEVMHGTGDELFDHIVQCIADFLEYMG-----MKGVSLP 583
Query: 172 LGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVND 230
LGFTFSFP +Q S+ L+KWTKGF GEDVV L +A+ R D+ V A+VND
Sbjct: 584 LGFTFSFPCQQNSLDESILLKWTKGFKASGCEGEDVVTLLKEAIHRREEFDLDVVAVVND 643
Query: 231 TIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRS 290
T+GT+ + + +I+GTG+NA Y+E + G + G M +NMEWG F
Sbjct: 644 TVGTMMTCGFEDPHCEVGLIVGTGSNACYMEEMRNVELVEG---EEGRMCVNMEWGAFGD 700
Query: 291 SHLP---LTEYDEALDTESLNPGEQ 312
+ TE+D A+D SLNPG+Q
Sbjct: 701 NGCLDDFRTEFDVAVDELSLNPGKQ 725
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 150/265 (56%), Gaps = 14/265 (5%)
Query: 55 LRQVADAMTVEMHAGL--ASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
L +++ EM GL + + +KML ++V + P G E G F ALDLGGTNFRVL V
Sbjct: 22 LLEISKRFRKEMEKGLGATTHPTAAVKMLPTFVRSTPDGTEHGEFLALDLGGTNFRVLWV 81
Query: 113 QLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172
++ + V+ E + +IP +M GS +LFD+IA LA F+ + + ++ L
Sbjct: 82 KVTDNGLQKVEMENQIYAIPEDIMRGSGTQLFDHIAECLANFM----DKLQIKD-KKLPL 136
Query: 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDT 231
GFTFSFP QT + L+ WTKGF G DVV + KA++R G D+ + A+VNDT
Sbjct: 137 GFTFSFPCHQTKLDESFLVSWTKGFKSSGVEGRDVVALIRKAIQRRGDFDIDIVAVVNDT 196
Query: 232 IGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF--- 288
+GT+ Y + + +I+GTG+NA Y+E I G G M INMEWG F
Sbjct: 197 VGTMMTCGYDDHNCEIGLIVGTGSNACYMEEMRHIDMVEG---DEGRMCINMEWGAFGDD 253
Query: 289 RSSHLPLTEYDEALDTESLNPGEQV 313
S + TE+D+ +D SLNPG+Q+
Sbjct: 254 GSLNDIRTEFDQEIDMGSLNPGKQL 278
>pdb|3HM8|A Chain A, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|B Chain B, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|C Chain C, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|D Chain D, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
Length = 445
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 143/265 (53%), Gaps = 21/265 (7%)
Query: 54 KLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVL--R 111
+L V M M GL E S L+ML ++V P G E+G F ALDLGGTNFRVL R
Sbjct: 19 QLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVR 77
Query: 112 VQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171
V G V+ E SIP + GS +LFD+I + F +G G+
Sbjct: 78 VTTG------VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQG-----LSGQSLP 126
Query: 172 LGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAM-ERIGLDMRVAALVND 230
LGFTFSFP RQ + G L+ WTKGF D G+DVV L +A+ R +++ V A+VND
Sbjct: 127 LGFTFSFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQAVELNVVAIVND 186
Query: 231 TIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF-- 288
T+GT+ Y + +I+GTGTNA Y+E + G SG M INMEWG F
Sbjct: 187 TVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSGRMCINMEWGAFGD 243
Query: 289 -RSSHLPLTEYDEALDTESLNPGEQ 312
S + T +D ++D S+NPG+Q
Sbjct: 244 DGSLAMLSTRFDASVDQASINPGKQ 268
>pdb|1IG8|A Chain A, Crystal Structure Of Yeast Hexokinase Pii With The Correct
Amino Acid Sequence
Length = 486
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 146/280 (52%), Gaps = 13/280 (4%)
Query: 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYAL 100
++ E+ P L+ V E+ GL+ +GG+ + M+ +V + PTG E G F A+
Sbjct: 27 IENFEKIFTVPTETLQAVTKHFISELEKGLSKKGGN-IPMIPGWVMDFPTGKESGDFLAI 85
Query: 101 DLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHL-MTGSSHELFDYIAAALAKFVATEG 159
DLGGTN RV+ V+LGG R + +P + T + EL+++IA +L F+
Sbjct: 86 DLGGTNLRVVLVKLGG--DRTFDTTQSKYRLPDAMRTTQNPDELWEFIADSLKAFI---D 140
Query: 160 EGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG 219
E F LGFTFSFP Q I G L +WTKGF I + DVV L K + +
Sbjct: 141 EQFPQGISEPIPLGFTFSFPASQNKINEGILQRWTKGFDIPNIENHDVVPMLQKQITKRN 200
Query: 220 LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL----PK 275
+ + V AL+NDT GTL Y + + VI GTG N AY + I K G L P
Sbjct: 201 IPIEVVALINDTTGTLVASYYTDPETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDIPP 260
Query: 276 SGEMVINMEWGNFRSSH--LPLTEYDEALDTESLNPGEQV 313
S M IN E+G+F + H LP T+YD +D ES PG+Q
Sbjct: 261 SAPMAINCEYGSFDNEHVVLPRTKYDITIDEESPRPGQQT 300
>pdb|3B8A|X Chain X, Crystal Structure Of Yeast Hexokinase Pi In Complex With
Glucose
Length = 485
Score = 164 bits (414), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 143/266 (53%), Gaps = 15/266 (5%)
Query: 55 LRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQL 114
LR+V E++ GL +GG+ + M+ +V PTG E G + A+DLGGTN RV+ V+L
Sbjct: 41 LRKVVKHFIDELNKGLTKKGGN-IPMIPGWVMEFPTGKESGNYLAIDLGGTNLRVVLVKL 99
Query: 115 GGREGRVVKQEFEEVSIPPHLMTGSSH--ELFDYIAAALAKFVATEGEGFHVSPGRQREL 172
G Q ++ PH M + H EL+ +IA +L F+ E ++ L
Sbjct: 100 SGNHTFDTTQSKYKL---PHDMRTTKHQEELWSFIADSLKDFMV---EQELLNTKDTLPL 153
Query: 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTI 232
GFTFS+P Q I G L +WTKGF I + G DVV L + + L + + AL+NDT+
Sbjct: 154 GFTFSYPASQNKINEGILQRWTKGFDIPNVEGHDVVPLLQNEISKRELPIEIVALINDTV 213
Query: 233 GTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL----PKSGEMVINMEWGNF 288
GTL Y + + VI GTG N A+ + I K G L P + M IN E+G+F
Sbjct: 214 GTLIASYYTDPETKMGVIFGTGVNGAFYDVVSDIEKLEGKLADDIPSNSPMAINCEYGSF 273
Query: 289 RSSH--LPLTEYDEALDTESLNPGEQ 312
+ H LP T+YD A+D +S PG+Q
Sbjct: 274 DNEHLVLPRTKYDVAVDEQSPRPGQQ 299
>pdb|2YHX|A Chain A, Sequencing A Protein By X-Ray Crystallography. Ii.
Refinement Of Yeast Hexokinase B Co-Ordinates And
Sequence At 2.1 Angstroms Resolution
Length = 457
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 20/188 (10%)
Query: 78 LKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGRE------GRVVKQEFEEVSI 131
+ M+ +V +G + G F A+ +GG + V+ + L GR+ R + +I
Sbjct: 44 IPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAI 103
Query: 132 PPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLI 191
P L + + + + + LGFTF + + G +
Sbjct: 104 PSDLWGNXAXSNAAFSSXEFSSXAGSV------------PLGFTFXEAGAKEXVIKGQIT 151
Query: 192 KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVIL 251
FS+ ++ + A G A + D+ G L Y + +I
Sbjct: 152 XQAXAFSLAXL--XKLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIF 209
Query: 252 GTGTNAAY 259
G+G NAAY
Sbjct: 210 GSGVNAAY 217
>pdb|3IV7|A Chain A, Crystal Structure Of Iron-Containing Alcohol Dehydrogenase
(Np_602249.1) From Corynebacterium Glutamicum Atcc 13032
Kitasato At 2.07 A Resolution
pdb|3IV7|B Chain B, Crystal Structure Of Iron-Containing Alcohol Dehydrogenase
(Np_602249.1) From Corynebacterium Glutamicum Atcc 13032
Kitasato At 2.07 A Resolution
Length = 364
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 94 KGLFYALD-LGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALA 152
GL + +D L G N + L R + Q ++ PH + G L+ AA++
Sbjct: 173 NGLAHCIDSLWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEALYGAYLAAVS 232
Query: 153 KFVATEGEGFHVSPGRQRELGFTFSFPVRQT 183
A+ G G H LG TF+ P QT
Sbjct: 233 --FASAGSGLHHK--ICHTLGGTFNLPHAQT 259
>pdb|1HKG|A Chain A, Structural Dynamics Of Yeast Hexokinase During Catalysis
Length = 457
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 20/188 (10%)
Query: 78 LKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGRE------GRVVKQEFEEVSI 131
+ M+ +V G + G F A+ +GG + V+ + L G + R + +I
Sbjct: 44 IPMVPGWVLKQVXGSQAGSFLAIVMGGGDLEVILIXLAGYQESSIXASRSLAASMXTTAI 103
Query: 132 PPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLI 191
P L + + + + + LGFTF + + G +
Sbjct: 104 PSDLWGNXAXSNAAFSSXEFSSXAGS------------VPLGFTFXEAGAKEXVIKGQIT 151
Query: 192 KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVIL 251
FS+ ++ + A G A + D+ G L Y + +I
Sbjct: 152 XQAXAFSLAXL--XKLISAMXNAXFPAGDXXXXVADIXDSHGILXXVNYTDAXIKMGIIF 209
Query: 252 GTGTNAAY 259
G+G NAAY
Sbjct: 210 GSGVNAAY 217
>pdb|3BS6|A Chain A, 1.8 Angstrom Crystal Structure Of The Periplasmic Domain
Of The Membrane Insertase Yidc
pdb|3BS6|B Chain B, 1.8 Angstrom Crystal Structure Of The Periplasmic Domain
Of The Membrane Insertase Yidc
Length = 280
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 63 TVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLG----GTNFRVLRVQLGGRE 118
VE A + +EG ++L++ +Y D G+ + L G N+ V E
Sbjct: 77 NVEKDAYVLAEGQNELQVPXTYTD--AAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLE 134
Query: 119 GRVVKQEFEEVSIPPHLMTGSSH 141
Q + +++PPHL TGSS+
Sbjct: 135 ISSFGQLKQSITLPPHLDTGSSN 157
>pdb|3BLC|A Chain A, Crystal Structure Of The Periplasmic Domain Of The
Escherichia Coli Yidc
pdb|3BLC|B Chain B, Crystal Structure Of The Periplasmic Domain Of The
Escherichia Coli Yidc
Length = 330
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 63 TVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLG----GTNFRVLRVQLGGRE 118
VE A + +EG ++L++ +Y D G+ + L G N+ V E
Sbjct: 108 NVEKDAYVLAEGQNELQVPXTYTDA--AGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLE 165
Query: 119 GRVVKQEFEEVSIPPHLMTGSSH 141
Q + +++PPHL TGSS+
Sbjct: 166 ISSFGQLKQSITLPPHLDTGSSN 188
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,722,707
Number of Sequences: 62578
Number of extensions: 416247
Number of successful extensions: 1258
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1126
Number of HSP's gapped (non-prelim): 32
length of query: 343
length of database: 14,973,337
effective HSP length: 100
effective length of query: 243
effective length of database: 8,715,537
effective search space: 2117875491
effective search space used: 2117875491
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)