Query 019310
Match_columns 343
No_of_seqs 169 out of 765
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 14:07:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019310.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019310hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f9m_A Glucokinase; hexokinase 100.0 2.4E-92 8.3E-97 711.2 28.7 287 36-330 16-315 (470)
2 3hm8_A Hexokinase-3; glucose, 100.0 2.3E-88 7.8E-93 677.9 28.4 278 40-330 5-291 (445)
3 3o8m_A Hexokinase; rnaseh-like 100.0 1.7E-86 5.7E-91 672.3 30.3 294 33-332 19-323 (485)
4 1bdg_A Hexokinase; phosphotran 100.0 1.2E-80 4.1E-85 626.5 29.8 288 34-330 5-303 (451)
5 1cza_N Hexokinase type I; stru 100.0 6.9E-77 2.4E-81 642.8 31.3 284 39-330 468-762 (917)
6 2yhx_A Hexokinase B; transfera 100.0 6E-74 2.1E-78 578.2 27.9 283 38-331 6-297 (457)
7 1cza_N Hexokinase type I; stru 100.0 3.7E-65 1.3E-69 551.4 26.5 286 36-329 17-313 (917)
8 1z05_A Transcriptional regulat 99.7 1.5E-16 5.3E-21 158.0 18.3 203 43-283 58-274 (429)
9 2hoe_A N-acetylglucosamine kin 99.7 2.3E-16 7.9E-21 154.3 17.3 208 43-284 38-253 (380)
10 1z6r_A MLC protein; transcript 99.7 4.1E-16 1.4E-20 153.5 18.6 210 43-283 35-252 (406)
11 2qm1_A Glucokinase; alpha-beta 99.7 1.3E-16 4.3E-21 151.7 13.5 162 95-284 6-175 (326)
12 4db3_A Glcnac kinase, N-acetyl 99.6 1.4E-15 4.8E-20 146.0 12.7 156 96-283 25-186 (327)
13 3vgl_A Glucokinase; ROK family 99.6 8.5E-16 2.9E-20 146.9 9.8 153 95-282 2-161 (321)
14 3mcp_A Glucokinase; structural 99.6 1.5E-15 5.2E-20 148.9 10.8 160 93-287 7-189 (366)
15 2ap1_A Putative regulator prot 99.6 3.6E-15 1.2E-19 142.4 12.5 158 95-284 24-187 (327)
16 3vov_A Glucokinase, hexokinase 99.6 3E-15 1E-19 142.2 10.7 156 96-283 2-164 (302)
17 4htl_A Beta-glucoside kinase; 99.6 3.2E-15 1.1E-19 141.6 10.3 151 96-282 5-162 (297)
18 2yhw_A Bifunctional UDP-N-acet 99.6 1.1E-14 3.6E-19 140.1 12.9 158 94-283 29-197 (343)
19 2aa4_A Mannac kinase, putative 99.6 7.5E-15 2.6E-19 137.5 10.9 155 96-284 2-162 (289)
20 1woq_A Inorganic polyphosphate 99.6 2.9E-14 1E-18 132.7 14.9 161 90-282 7-175 (267)
21 3r8e_A Hypothetical sugar kina 99.6 4.1E-15 1.4E-19 142.2 9.3 162 92-284 16-184 (321)
22 3epq_A Putative fructokinase; 99.6 6.6E-15 2.3E-19 140.3 10.1 147 96-283 4-161 (302)
23 3htv_A D-allose kinase, alloki 99.6 1.5E-14 5.3E-19 138.0 11.6 162 93-283 5-172 (310)
24 2gup_A ROK family protein; sug 99.5 2.6E-14 9E-19 134.1 8.7 149 96-283 5-158 (292)
25 1sz2_A Glucokinase, glucose ki 99.4 4.9E-13 1.7E-17 128.3 7.8 147 94-281 13-174 (332)
26 2q2r_A Glucokinase 1, putative 99.4 3.2E-13 1.1E-17 131.5 6.6 156 94-282 28-220 (373)
27 3lm2_A Putative kinase; struct 99.4 1.5E-12 5E-17 119.8 9.0 138 93-282 4-144 (226)
28 2ch5_A NAGK protein; transfera 99.3 9.4E-12 3.2E-16 119.1 12.5 144 96-288 7-152 (347)
29 1zc6_A Probable N-acetylglucos 99.1 3.5E-10 1.2E-14 106.9 11.2 125 96-261 12-139 (305)
30 1zbs_A Hypothetical protein PG 99.1 3.4E-10 1.2E-14 106.5 10.6 127 97-264 2-130 (291)
31 1saz_A Probable butyrate kinas 99.1 3.6E-11 1.2E-15 118.0 3.7 167 96-282 3-213 (381)
32 1zxo_A Conserved hypothetical 99.1 1.1E-10 3.8E-15 109.8 6.3 122 97-263 2-127 (291)
33 2e2o_A Hexokinase; acetate and 99.1 6.5E-11 2.2E-15 111.3 4.6 116 96-255 3-118 (299)
34 3ifr_A Carbohydrate kinase, FG 97.7 9.3E-05 3.2E-09 74.9 9.2 96 92-196 4-108 (508)
35 2p3r_A Glycerol kinase; glycer 97.5 0.00023 8E-09 72.0 9.7 94 93-195 1-104 (510)
36 4e1j_A Glycerol kinase; struct 97.5 0.00022 7.4E-09 72.4 9.3 92 95-195 26-127 (520)
37 3g25_A Glycerol kinase; IDP007 97.4 0.00041 1.4E-08 69.9 9.6 93 96-195 7-107 (501)
38 2dpn_A Glycerol kinase; thermu 97.4 0.00046 1.6E-08 69.3 9.6 92 96-195 3-103 (495)
39 3h3n_X Glycerol kinase; ATP-bi 97.4 0.00061 2.1E-08 68.8 10.5 95 94-195 4-106 (506)
40 2w40_A Glycerol kinase, putati 97.4 0.00058 2E-08 68.8 9.8 91 96-194 5-106 (503)
41 2d4w_A Glycerol kinase; alpha 97.3 0.00064 2.2E-08 68.5 9.4 91 96-194 3-102 (504)
42 2zf5_O Glycerol kinase; hypert 97.3 0.0007 2.4E-08 68.1 9.1 82 96-184 4-92 (497)
43 2itm_A Xylulose kinase, xylulo 97.2 0.00084 2.9E-08 67.2 9.4 80 96-184 1-87 (484)
44 3ezw_A Glycerol kinase; glycer 97.2 0.0008 2.7E-08 68.2 8.9 86 92-184 1-94 (526)
45 3hz6_A Xylulokinase; xylulose, 97.0 0.0017 5.9E-08 65.6 9.1 92 96-195 6-104 (511)
46 3l0q_A Xylulose kinase; xlylul 97.0 0.0016 5.3E-08 66.5 8.6 74 95-175 5-81 (554)
47 3jvp_A Ribulokinase; PSI-II, N 96.8 0.0025 8.6E-08 65.3 8.4 83 95-184 5-106 (572)
48 3ll3_A Gluconate kinase; xylul 96.8 0.0045 1.6E-07 62.4 9.8 90 96-195 5-101 (504)
49 2uyt_A Rhamnulokinase; rhamnos 96.3 0.013 4.4E-07 58.5 9.3 80 96-184 5-93 (489)
50 3bex_A Type III pantothenate k 96.2 0.0077 2.6E-07 55.5 6.9 180 96-332 4-203 (249)
51 3h6e_A Carbohydrate kinase, FG 95.9 0.013 4.5E-07 58.9 7.2 57 96-155 7-65 (482)
52 3i8b_A Xylulose kinase; strain 95.8 0.033 1.1E-06 56.3 9.9 85 95-194 5-94 (515)
53 3djc_A Type III pantothenate k 95.7 0.08 2.7E-06 49.2 11.5 51 96-160 3-53 (266)
54 4ehu_A Activator of 2-hydroxyi 93.4 0.23 7.8E-06 45.2 8.2 36 225-260 74-109 (276)
55 2ych_A Competence protein PILM 93.3 1.5 5E-05 41.5 14.0 53 206-260 151-207 (377)
56 4bc3_A Xylulose kinase; transf 92.8 0.26 8.9E-06 49.8 8.2 40 219-260 269-310 (538)
57 3h1q_A Ethanolamine utilizatio 91.4 3.8 0.00013 36.6 13.7 30 209-240 109-138 (272)
58 2h3g_X Biosynthetic protein; p 89.6 0.66 2.3E-05 42.9 6.9 44 97-149 2-45 (268)
59 1hux_A Activator of (R)-2-hydr 87.8 1.2 4.1E-05 40.8 7.4 37 226-262 78-114 (270)
60 4gni_A Putative heat shock pro 87.3 2.8 9.4E-05 40.1 9.9 52 207-260 165-221 (409)
61 3i33_A Heat shock-related 70 k 86.4 3 0.0001 39.7 9.6 53 207-261 173-231 (404)
62 3qfu_A 78 kDa glucose-regulate 85.7 4.6 0.00016 38.0 10.5 52 207-260 168-222 (394)
63 4a2a_A Cell division protein F 77.5 31 0.0011 33.4 13.2 54 206-261 168-224 (419)
64 4b9q_A Chaperone protein DNAK; 73.0 14 0.00049 37.6 9.8 54 207-262 150-206 (605)
65 2v7y_A Chaperone protein DNAK; 68.3 33 0.0011 33.9 11.0 48 208-257 125-174 (509)
66 3mdq_A Exopolyphosphatase; str 64.4 25 0.00087 32.7 8.8 62 96-157 5-68 (315)
67 1yuw_A Heat shock cognate 71 k 62.3 35 0.0012 34.2 10.0 48 208-257 155-206 (554)
68 3hi0_A Putative exopolyphospha 60.7 21 0.00071 35.7 7.9 76 80-157 2-79 (508)
69 1t6c_A Exopolyphosphatase; alp 56.8 27 0.00094 32.5 7.6 62 96-157 13-76 (315)
70 3nuw_A 2-OXO-3-deoxygalactonat 56.6 12 0.00041 35.1 4.9 52 95-154 6-57 (295)
71 2fsj_A Hypothetical protein TA 54.2 19 0.00064 33.9 5.9 52 93-153 188-239 (346)
72 3t69_A Putative 2-dehydro-3-de 52.0 10 0.00034 36.2 3.6 54 95-155 7-60 (330)
73 1hjr_A Holliday junction resol 49.9 38 0.0013 28.6 6.6 22 96-117 2-23 (158)
74 1u6z_A Exopolyphosphatase; alp 45.5 53 0.0018 32.8 8.0 63 96-158 12-76 (513)
75 2ews_A Pantothenate kinase; PA 44.1 13 0.00043 34.7 2.9 19 94-112 19-37 (287)
76 3psf_A Transcription elongatio 43.2 2.9E+02 0.0098 30.2 13.7 102 96-240 520-632 (1030)
77 3psi_A Transcription elongatio 41.8 3E+02 0.01 30.7 13.7 102 96-240 517-629 (1219)
78 3cer_A Possible exopolyphospha 39.3 56 0.0019 30.8 6.7 63 96-158 17-82 (343)
79 3qfu_A 78 kDa glucose-regulate 37.9 1.4E+02 0.0048 27.6 9.3 30 88-117 199-228 (394)
80 3aap_A Ectonucleoside triphosp 35.6 89 0.003 29.6 7.5 22 94-115 2-23 (353)
81 3cet_A Conserved archaeal prot 34.2 25 0.00084 33.6 3.2 19 97-115 2-20 (334)
82 3tai_A DNA double-strand break 32.4 42 0.0014 33.3 4.5 48 50-101 24-71 (471)
83 1nu0_A Hypothetical protein YQ 30.0 2.2E+02 0.0076 23.1 8.2 23 95-117 3-25 (138)
84 3zyy_X Iron-sulfur cluster bin 29.8 84 0.0029 32.5 6.6 34 229-263 355-388 (631)
85 1iv0_A Hypothetical protein; r 29.5 98 0.0034 23.8 5.5 21 96-116 2-22 (98)
86 1dkg_D Molecular chaperone DNA 28.9 26 0.00087 32.8 2.4 49 208-258 151-202 (383)
87 3i33_A Heat shock-related 70 k 28.3 2.2E+02 0.0075 26.4 8.9 24 94-117 213-236 (404)
88 1mul_A NS2, HU-2, DNA binding 28.0 91 0.0031 23.2 5.0 36 38-73 4-39 (90)
89 3d2f_A Heat shock protein homo 26.7 2.4E+02 0.008 29.0 9.4 23 94-116 196-218 (675)
90 1b8z_A Protein (histonelike pr 26.6 93 0.0032 23.1 4.8 36 38-73 4-39 (90)
91 1p71_A DNA-binding protein HU; 26.5 93 0.0032 23.4 4.8 36 38-73 4-39 (94)
92 4ep4_A Crossover junction endo 26.3 2.9E+02 0.01 23.2 8.6 22 96-117 2-23 (166)
93 1nxu_A Hypothetical oxidoreduc 26.0 56 0.0019 31.0 4.1 56 34-92 5-60 (333)
94 3i0p_A Malate dehydrogenase; a 25.5 68 0.0023 30.8 4.7 58 32-92 9-67 (365)
95 3rhi_A DNA-binding protein HU; 25.5 1E+02 0.0035 23.1 4.9 36 38-73 7-42 (93)
96 2o97_B NS1, HU-1, DNA-binding 25.3 94 0.0032 23.1 4.6 36 38-73 4-39 (90)
97 1nvp_D Transcription initiatio 24.8 1.2E+02 0.004 24.1 5.2 41 36-76 13-53 (108)
98 3c4i_A DNA-binding protein HU 24.5 1E+02 0.0036 23.4 4.8 36 38-73 4-39 (99)
99 4gni_A Putative heat shock pro 24.0 2.7E+02 0.0092 25.9 8.7 23 95-117 205-227 (409)
100 3s5p_A Ribose 5-phosphate isom 24.0 48 0.0016 28.5 3.0 63 200-262 28-97 (166)
101 1yuw_A Heat shock cognate 71 k 23.9 2.4E+02 0.0083 28.0 8.7 23 94-116 192-214 (554)
102 3uoe_A Dehydrogenase; structur 23.6 57 0.0019 31.3 3.7 58 32-92 26-83 (357)
103 1jce_A ROD shape-determining p 23.6 45 0.0016 30.6 3.0 16 96-111 4-19 (344)
104 2kho_A Heat shock protein 70; 23.5 41 0.0014 34.1 2.9 19 95-113 2-20 (605)
105 1owf_A IHF-alpha, integration 23.4 1.1E+02 0.0039 23.1 4.9 36 38-73 6-41 (99)
106 1nh2_D Transcription initiatio 23.3 1.3E+02 0.0046 24.3 5.4 38 36-73 17-54 (121)
107 1rfm_A L-sulfolactate dehydrog 23.3 51 0.0017 31.4 3.3 57 33-92 4-60 (344)
108 1xrh_A Ureidoglycolate dehydro 22.8 63 0.0022 30.8 3.9 57 33-92 6-62 (351)
109 2x06_A L-sulfolactate dehydrog 22.5 54 0.0019 31.2 3.3 56 34-92 5-60 (344)
110 1wtj_A Ureidoglycolate dehydro 22.5 62 0.0021 30.8 3.7 59 32-93 13-71 (343)
111 4h8a_A Ureidoglycolate dehydro 21.6 54 0.0018 31.2 3.1 57 33-92 6-62 (339)
112 2v7y_A Chaperone protein DNAK; 21.4 3E+02 0.01 26.8 8.7 23 94-116 160-182 (509)
113 2f9w_A Pantothenate kinase; CO 20.6 61 0.0021 29.7 3.2 81 243-332 137-224 (271)
114 4em8_A Ribose 5-phosphate isom 20.4 36 0.0012 28.7 1.4 61 200-261 14-81 (148)
115 2g8y_A Malate/L-lactate dehydr 20.2 74 0.0025 30.8 3.8 57 33-92 30-86 (385)
116 4ehu_A Activator of 2-hydroxyi 20.0 1.2E+02 0.0041 26.7 5.0 48 96-152 94-141 (276)
No 1
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=2.4e-92 Score=711.19 Aligned_cols=287 Identities=37% Similarity=0.608 Sum_probs=265.8
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCcceeeecccccCCCCcccccEEEEeeCCceEEEEEEE
Q 019310 36 RAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQ 113 (343)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~l~MlPs~v~~lP~G~E~G~fLaIDlGGTNlRv~lV~ 113 (343)
.+.+.++++.++|.++.++|++|+++|..||++||++++ .|+++||||||+++|+|+|+|.|||||||||||||++|+
T Consensus 16 ~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V~ 95 (470)
T 3f9m_A 16 MKKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVK 95 (470)
T ss_dssp HHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEEE
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEEEEE
Confidence 456667778888889999999999999999999999763 478999999999999999999999999999999999999
Q ss_pred eCCCc--ceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEe
Q 019310 114 LGGRE--GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLI 191 (343)
Q Consensus 114 l~g~~--~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGftFSfPv~q~~i~~g~Li 191 (343)
|.|++ .+.+++.+++|+||++++.+++++||||||+||.+|+++++.. ++.+||||||||||+|+++++|+|+
T Consensus 96 L~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~-----~~~lpLGfTFSFP~~Q~sl~~g~Li 170 (470)
T 3f9m_A 96 VGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKGILL 170 (470)
T ss_dssp EEC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCS-----SSCCEEEEEECSCEEEEETTEEEEC
T ss_pred ECCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhcccc-----ccccceEEEEeccccccCCCceEEE
Confidence 98765 3456667789999999999999999999999999999988754 3689999999999999999999999
Q ss_pred eeccccccCCCCCCcHHHHHHHHHHHcC-CCceEEEEEechHHHHhcccccCCCcEEEEEEccccceeEEcccCcCCCCC
Q 019310 192 KWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWH 270 (343)
Q Consensus 192 ~WtKgF~~~~~~G~dv~~lL~~al~r~~-l~v~vvaIvNDTvatlla~~y~~~~~~iglIlGTGtNa~y~e~~~~I~k~~ 270 (343)
+|||||++++++|+||+++|++|++|++ ++++|+||+|||||||++++|.+++|.||+|+|||||+||+|+.++|+|++
T Consensus 171 ~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~k~~ 250 (470)
T 3f9m_A 171 NWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVE 250 (470)
T ss_dssp CCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSS
T ss_pred eccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeecccccccc
Confidence 9999999999999999999999999998 799999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcEEEEecCCCcCCCC---CCCChhhHhHhccCCCCCcccceeecccch-----hHHhhhhh
Q 019310 271 GLLPKSGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQVAILMCQFHV-----TIAYIDSF 330 (343)
Q Consensus 271 ~~~~e~~~miINtEwG~f~~~~---lp~T~~D~~lD~~s~nPG~q~fEKmiSG~~-----~~~~~~~~ 330 (343)
+ ..++|+||||||+||+++ +|+|+||++||++|+|||+|+||||||||| |++.+|+.
T Consensus 251 ~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRliL~~l~ 315 (470)
T 3f9m_A 251 G---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLV 315 (470)
T ss_dssp C---CSSEEEEECCGGGTTTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred C---CCCcEEEeechhhcCCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhHHHHHHHHHHHHH
Confidence 6 567899999999999765 579999999999999999999999999996 99999965
No 2
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-88 Score=677.89 Aligned_cols=278 Identities=39% Similarity=0.611 Sum_probs=258.9
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCcccccEEEEeeCCceEEEEEEEeCCCcc
Q 019310 40 ILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREG 119 (343)
Q Consensus 40 ~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lP~G~E~G~fLaIDlGGTNlRv~lV~l~g~~~ 119 (343)
.++++.++|.++.++|++|+++|..||++||++++ |+++||||||+++|+|+|+|.|||||||||||||++|+|.|.
T Consensus 5 ~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~-s~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~g~-- 81 (445)
T 3hm8_A 5 LLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG-- 81 (445)
T ss_dssp HHHHHHGGGSCCHHHHHHHHHHHHHHHHHHHHTSC-CSSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEESSS--
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEECCc--
Confidence 34556666779999999999999999999999876 789999999999999999999999999999999999999765
Q ss_pred eeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEeeecccccc
Q 019310 120 RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSI 199 (343)
Q Consensus 120 ~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGftFSfPv~q~~i~~g~Li~WtKgF~~ 199 (343)
+.+.+++|+||++++.+++++||||||+||.+|+++++.. ++.+|||||||||++|+++++|+|++|||||++
T Consensus 82 --~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~-----~~~lplGftFSFP~~Q~sl~~g~Li~wtKGF~~ 154 (445)
T 3hm8_A 82 --VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLS-----GQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKA 154 (445)
T ss_dssp --EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCT-----TCCCCEEEEECSCEECSSTTCCEECCCCTTCCC
T ss_pred --eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcc-----cccCcceEEEeeeeEeccCCceEEEEeeccccC
Confidence 3455678999999999999999999999999999987653 467999999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHc-CCCceEEEEEechHHHHhcccccCCCcEEEEEEccccceeEEcccCcCCCCCCCCCCCCc
Q 019310 200 EDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGE 278 (343)
Q Consensus 200 ~~~~G~dv~~lL~~al~r~-~l~v~vvaIvNDTvatlla~~y~~~~~~iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~ 278 (343)
++++|+||+++|+++++|+ +++++|+||+|||||||++++|.++++.||+|+|||||+||+|+.++|+|+++ +.++
T Consensus 155 ~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~---~~~~ 231 (445)
T 3hm8_A 155 SDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSGR 231 (445)
T ss_dssp BTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCC---CSSE
T ss_pred CCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCC---CCCc
Confidence 9999999999999999998 58999999999999999999999999999999999999999999999999875 4679
Q ss_pred EEEEecCCCcCCCCC---CCChhhHhHhccCCCCCcccceeecccch-----hHHhhhhh
Q 019310 279 MVINMEWGNFRSSHL---PLTEYDEALDTESLNPGEQVAILMCQFHV-----TIAYIDSF 330 (343)
Q Consensus 279 miINtEwG~f~~~~l---p~T~~D~~lD~~s~nPG~q~fEKmiSG~~-----~~~~~~~~ 330 (343)
|+||||||+||++++ |+|+||++||++|.|||+|+||||+|||| |++.+|+.
T Consensus 232 miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGEivRliL~~l~ 291 (445)
T 3hm8_A 232 MCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLT 291 (445)
T ss_dssp EEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHHHHHHHHHHHH
T ss_pred EEEEcchhhcCCCCCCcCCCCccchHHhcCCCCCCceEeeeecchhhHHHHHHHHHHHHH
Confidence 999999999998764 89999999999999999999999999996 99999986
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=1.7e-86 Score=672.27 Aligned_cols=294 Identities=36% Similarity=0.583 Sum_probs=270.9
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCcccccEEEEeeCCceEEEEEE
Q 019310 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112 (343)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lP~G~E~G~fLaIDlGGTNlRv~lV 112 (343)
.+.++.+.+++++++|.++.++|++|+++|..||++||++++ ++++||||||+++|+|+|+|.|||||||||||||++|
T Consensus 19 ~~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~V 97 (485)
T 3o8m_A 19 VPANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKG-GNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVLV 97 (485)
T ss_dssp SCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSSSC-CSSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEEE
T ss_pred CcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEEE
Confidence 455788999999999999999999999999999999999865 6799999999999999999999999999999999999
Q ss_pred EeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEee
Q 019310 113 QLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIK 192 (343)
Q Consensus 113 ~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGftFSfPv~q~~i~~g~Li~ 192 (343)
++.|++.. ...+++|+||++++.+++++||||||+||.+|+++++... .++.+++|||||||++|+++++|+|++
T Consensus 98 ~l~g~~~~--~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~---~~~~l~lGftfSfP~~q~~i~~g~li~ 172 (485)
T 3o8m_A 98 KLGGNHDF--DTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDG---VSEPLPLGFTFSYPASQKKINSGVLQR 172 (485)
T ss_dssp EEESSSCE--EEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTC---CSSCEEEEEEECSCEECSBTTCCEECC
T ss_pred EECCCCce--EEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccc---cccccceEEEEeeeEEEcccCCEEEee
Confidence 99887543 3345789999999988899999999999999999986542 146799999999999999999999999
Q ss_pred eccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccccceeEEcccCcCCCCCC-
Q 019310 193 WTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG- 271 (343)
Q Consensus 193 WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~~~~~iglIlGTGtNa~y~e~~~~I~k~~~- 271 (343)
|||||++++++|+||+++|+++++|+++|++|+||+||||||||+++|.++++.||+|||||||+||+|+.++|+|+++
T Consensus 173 wtKGF~i~~~~G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~~ 252 (485)
T 3o8m_A 173 WTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGL 252 (485)
T ss_dssp CCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTTT
T ss_pred ccccccCCCcCCccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeecccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999973
Q ss_pred ---CCCCCCcEEEEecCCCcCCCC--CCCChhhHhHhccCCCCCcccceeecccch-----hHHhhhhhcc
Q 019310 272 ---LLPKSGEMVINMEWGNFRSSH--LPLTEYDEALDTESLNPGEQVAILMCQFHV-----TIAYIDSFID 332 (343)
Q Consensus 272 ---~~~e~~~miINtEwG~f~~~~--lp~T~~D~~lD~~s~nPG~q~fEKmiSG~~-----~~~~~~~~~~ 332 (343)
..++.++|+||||||+||+.+ +|+|+||++||++|.|||+|+||||+|||| |++.+|++-+
T Consensus 253 ~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~~~ 323 (485)
T 3o8m_A 253 LPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDS 323 (485)
T ss_dssp CCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCcEEEEcccccCCCCcccCCCCchhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHHHc
Confidence 334567899999999998653 899999999999999999999999999996 9999998743
No 4
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=100.00 E-value=1.2e-80 Score=626.55 Aligned_cols=288 Identities=36% Similarity=0.586 Sum_probs=265.2
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcC--CCCCcceeeecccccCCCCcccccEEEEeeCCceEEEEE
Q 019310 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLAS--EGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLR 111 (343)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~--~~~s~l~MlPs~v~~lP~G~E~G~fLaIDlGGTNlRv~l 111 (343)
++.+.+.+++|++.|.++.++|++|+++|..||++||++ +..|+++||||||+++|+|+|+|.|||||||||||||++
T Consensus 5 ~~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~ 84 (451)
T 1bdg_A 5 DQQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLS 84 (451)
T ss_dssp HHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcccCCCCCcccccccccCCCCCCCccceEEEEEeCCCeEEEEE
Confidence 345667889999999999999999999999999999983 334789999999999999999999999999999999999
Q ss_pred EEeCC-CcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEE
Q 019310 112 VQLGG-REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDL 190 (343)
Q Consensus 112 V~l~g-~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGftFSfPv~q~~i~~g~L 190 (343)
|++.| ++. ....+++|+||++++.+++++||||||+||++|+++++.. .+.++||||||||++|+++++|+|
T Consensus 85 V~l~G~~~~--~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~~~lG~tfsfPv~q~~~~~G~l 157 (451)
T 1bdg_A 85 VTLEGKGKS--PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATL 157 (451)
T ss_dssp EEECC-CCC--CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEE
T ss_pred EecCCCCcc--eEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHhcCCC-----ccccceEEEEeeEeccccCCCeEE
Confidence 99988 542 2333478999999888999999999999999999987653 256999999999999999999999
Q ss_pred eeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccccceeEEcccCcCCCCC
Q 019310 191 IKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWH 270 (343)
Q Consensus 191 i~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~~~~~iglIlGTGtNa~y~e~~~~I~k~~ 270 (343)
++|||||++++++|+||+++|+++++|+++|++|++|+|||||||++++|.++++.||+|+|||+|+||+|+.+.|+|++
T Consensus 158 ~~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~ 237 (451)
T 1bdg_A 158 VRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMD 237 (451)
T ss_dssp CCCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGC
T ss_pred eccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcEEEEecCCCcCCCC---CCCChhhHhHhccCCCCCcccceeecccch-----hHHhhhhh
Q 019310 271 GLLPKSGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQVAILMCQFHV-----TIAYIDSF 330 (343)
Q Consensus 271 ~~~~e~~~miINtEwG~f~~~~---lp~T~~D~~lD~~s~nPG~q~fEKmiSG~~-----~~~~~~~~ 330 (343)
+. +.+||+||+|||.||+++ +|+|+||.++|..|.|||+|+||||+||+| |++.+|+.
T Consensus 238 g~--~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~ 303 (451)
T 1bdg_A 238 GV--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLV 303 (451)
T ss_dssp SC--SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHH
T ss_pred CC--ccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHHHHHHHHHHhh
Confidence 64 678999999999999876 899999999999999999999999999996 78777764
No 5
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=6.9e-77 Score=642.84 Aligned_cols=284 Identities=40% Similarity=0.594 Sum_probs=260.1
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC--CCCcceeeecccccCCCCcccccEEEEeeCCceEEEEEEEeCC
Q 019310 39 AILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG 116 (343)
Q Consensus 39 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~--~~s~l~MlPs~v~~lP~G~E~G~fLaIDlGGTNlRv~lV~l~g 116 (343)
+.++++.++|.++.++|++|+++|++||++||+++ +.|+++||||||+++|+|+|+|.|||||||||||||++|++.+
T Consensus 468 ~~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~~ 547 (917)
T 1cza_N 468 RQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRS 547 (917)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEC
T ss_pred hhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCCCCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeCC
Confidence 34567777788999999999999999999999853 3478999999999999999999999999999999999999974
Q ss_pred CcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEeeeccc
Q 019310 117 REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKG 196 (343)
Q Consensus 117 ~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGftFSfPv~q~~i~~g~Li~WtKg 196 (343)
....++++.+++|+||++++.+++++||||||+||.+|+++++.. ++.+||||||||||+|+++++++|++||||
T Consensus 548 g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~l~lG~tfsfPv~q~~i~~~~L~~WtKg 622 (917)
T 1cza_N 548 GKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKG 622 (917)
T ss_dssp STTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTT
T ss_pred CcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCC-----ccceeEEEEeeccccccccCccEECceecc
Confidence 333366666789999999888899999999999999999987654 356899999999999999999999999999
Q ss_pred cccCCCCCCcHHHHHHHHHHHc-CCCceEEEEEechHHHHhcccccCCCcEEEEEEccccceeEEcccCcCCCCCCCCCC
Q 019310 197 FSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPK 275 (343)
Q Consensus 197 F~~~~~~G~dv~~lL~~al~r~-~l~v~vvaIvNDTvatlla~~y~~~~~~iglIlGTGtNa~y~e~~~~I~k~~~~~~e 275 (343)
|++++++|+||+++|+++++|+ +++++++||+|||||||++++|.++++.||+|+|||||+||+|+.++|+++.+ +
T Consensus 623 f~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g---~ 699 (917)
T 1cza_N 623 FKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---D 699 (917)
T ss_dssp CCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSC---C
T ss_pred cccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCC---C
Confidence 9999999999999999999987 79999999999999999999999999999999999999999999999999874 6
Q ss_pred CCcEEEEecCCCcCCCC---CCCChhhHhHhccCCCCCcccceeecccch-----hHHhhhhh
Q 019310 276 SGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQVAILMCQFHV-----TIAYIDSF 330 (343)
Q Consensus 276 ~~~miINtEwG~f~~~~---lp~T~~D~~lD~~s~nPG~q~fEKmiSG~~-----~~~~~~~~ 330 (343)
.+||+||||||+||+++ +|+|+||++||++|.|||+|+||||+|||| |++.+|+.
T Consensus 700 ~g~m~In~EwG~fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel~R~il~~~~ 762 (917)
T 1cza_N 700 QGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFT 762 (917)
T ss_dssp SSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHHHHHHHHHHH
T ss_pred cCcEEEecccccCCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHHHHHHHHHhc
Confidence 78999999999999876 589999999999999999999999999995 88888864
No 6
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=100.00 E-value=6e-74 Score=578.24 Aligned_cols=283 Identities=20% Similarity=0.238 Sum_probs=257.2
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCcccccEEEEeeCCceEEEEEEEeCCC
Q 019310 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGR 117 (343)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lP~G~E~G~fLaIDlGGTNlRv~lV~l~g~ 117 (343)
++.+++|.+.|.++.++|++|+++|..||+ ||++++ |+++||||||+++|+|+|+|+||||||||||||+++|++.|+
T Consensus 6 ~~~~~~~~~~f~~~~~~L~~i~~~~~~em~-gL~~~~-~~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~G~ 83 (457)
T 2yhx_A 6 XSLVEVHXXVFIVPPXILQAVVSILTTRXD-DXDSSA-ASIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGR 83 (457)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHSSS-CSSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEETT
T ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHhc-CCCCCC-CCCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeCCC
Confidence 466788888899999999999999999999 998754 679999999999999999999999999999999999999887
Q ss_pred cceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEeeecccc
Q 019310 118 EGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGF 197 (343)
Q Consensus 118 ~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGftFSfPv~q~~i~~g~Li~WtKgF 197 (343)
.. .+..++++++|++.+.+++++||+|||+||.+|+++++... ++.+++|||||||++|.++++|+|++|+|||
T Consensus 84 ~~--~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~----~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf 157 (457)
T 2yhx_A 84 QE--SSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSSX----AGSVPLGFTFXEAGAKEXVIKGQITXQAXAF 157 (457)
T ss_dssp EE--EEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSSC----SSCEEEEEECCSCCCCSBTTCCBCSSCCTTC
T ss_pred ee--EEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhccccc----ccccceeeEEEEEEEEeecCceEEEeeccCC
Confidence 42 33445789999998888999999999999999999865431 3568999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccccceeEEcccCcCCCCCCCC-C-C
Q 019310 198 SIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL-P-K 275 (343)
Q Consensus 198 ~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~~~~~iglIlGTGtNa~y~e~~~~I~k~~~~~-~-e 275 (343)
++++++ ||+++|+++++|+++|++|++|+|||+||+|+++|+++++.||+|+|||+|+||+++.++|+|+++.. . .
T Consensus 158 ~i~~~~--~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~ 235 (457)
T 2yhx_A 158 SLAXLX--KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGG 235 (457)
T ss_dssp CCSSCS--SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCS
T ss_pred CcchhH--HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCccccccccccccc
Confidence 999988 99999999999999999999999999999999999999999999999999999999999999986531 2 4
Q ss_pred CCcEEEEecCCCcCCCC--CCCChhhHhHhccCCCCCcccceeecccch-----hHHhhhhhc
Q 019310 276 SGEMVINMEWGNFRSSH--LPLTEYDEALDTESLNPGEQVAILMCQFHV-----TIAYIDSFI 331 (343)
Q Consensus 276 ~~~miINtEwG~f~~~~--lp~T~~D~~lD~~s~nPG~q~fEKmiSG~~-----~~~~~~~~~ 331 (343)
.++|+||||||+|++++ +|+|+||++||..|.||| |+||||+|||| |++.+|++-
T Consensus 236 ~g~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLGel~R~il~~~~~ 297 (457)
T 2yhx_A 236 AGXMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXGQSLRDVLMXFKX 297 (457)
T ss_dssp SCCEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred CCceEEEEEcccCCCCCCcCCccccccccccccCchH-HHHHHHhhhcCcHHHHHHHHHHHhc
Confidence 68899999999998654 899999999999999999 99999999996 888888653
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=3.7e-65 Score=551.39 Aligned_cols=286 Identities=36% Similarity=0.564 Sum_probs=258.1
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCcceeeecccccCCCCcccccEEEEeeCCceEEEEEEE
Q 019310 36 RAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQ 113 (343)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~l~MlPs~v~~lP~G~E~G~fLaIDlGGTNlRv~lV~ 113 (343)
.+.+.+++|.+.|.++.++|++|+++|..||++||+++. .|+++||||||+++|+|+|+|+||||||||||||+++|+
T Consensus 17 ~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lv~ 96 (917)
T 1cza_N 17 DQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQ 96 (917)
T ss_dssp HHHHHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccccCCCCCCCCcceEEEEEeCCCeEEEEEEE
Confidence 344567889999999999999999999999999998653 478999999999999999999999999999999999999
Q ss_pred eCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEeee
Q 019310 114 LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKW 193 (343)
Q Consensus 114 l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGftFSfPv~q~~i~~g~Li~W 193 (343)
+.|++...++..++++++|++++.+++++||+|||++|.+|+++++.. .+.+++|||||||++|+++++|+|++|
T Consensus 97 ~~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~-----~~~~~lGi~fs~P~~q~~~~~G~l~~w 171 (917)
T 1cza_N 97 VNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILITW 171 (917)
T ss_dssp EEEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEECCC
T ss_pred ecCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccEEEEEccccccCcCCceEEEec
Confidence 987644334345578999988777889999999999999999987643 245799999999999999999999999
Q ss_pred ccccccCCCCCCcHHHHHHHHHHHcC-CCceEEEEEechHHHHhcccccCCCcEEEEEEccccceeEEcccCcCCCCCCC
Q 019310 194 TKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGL 272 (343)
Q Consensus 194 tKgF~~~~~~G~dv~~lL~~al~r~~-l~v~vvaIvNDTvatlla~~y~~~~~~iglIlGTGtNa~y~e~~~~I~k~~~~ 272 (343)
+|||++++++|+||+++|+++++|++ +|+++++|+|||+||+++++|.++++.||+|+|||+|+||+++.++|+++.+.
T Consensus 172 tkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~~G~ 251 (917)
T 1cza_N 172 TKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGD 251 (917)
T ss_dssp CTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTSSCC
T ss_pred ccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCcccccccCC
Confidence 99999999999999999999999997 89999999999999999999999999999999999999999999999988763
Q ss_pred CCCCCcEEEEecCCCcCCCC---CCCChhhHhHhccCCCCCcccceeecccch-----hHHhhhh
Q 019310 273 LPKSGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQVAILMCQFHV-----TIAYIDS 329 (343)
Q Consensus 273 ~~e~~~miINtEwG~f~~~~---lp~T~~D~~lD~~s~nPG~q~fEKmiSG~~-----~~~~~~~ 329 (343)
.+||+||+|||.|++++ +|+|+||..+|..|.|||+|+||||+||+| |++..++
T Consensus 252 ---~g~~~in~E~G~f~~~~~l~~~~t~~D~~~dc~~g~pg~g~~Ek~~SG~yLgel~r~~l~~~ 313 (917)
T 1cza_N 252 ---EGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKM 313 (917)
T ss_dssp ---SSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSHHHHHHHHHHHHHHH
T ss_pred ---CCceEEeccccccCCccccccCCCccccccccCCcCCCccHhHHHhhhhhHHHHHHHHHHHh
Confidence 57999999999998765 469999999999999999999999999994 6666665
No 8
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.72 E-value=1.5e-16 Score=157.97 Aligned_cols=203 Identities=16% Similarity=0.203 Sum_probs=152.1
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCC----C---cceeeecccccCCCCcccccEEEEeeCCceEEEEEEEeC
Q 019310 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG----S---KLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLG 115 (343)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~----s---~l~MlPs~v~~lP~G~E~G~fLaIDlGGTNlRv~lV~l~ 115 (343)
++.+.+.++...+.++.++|.+ +||-.+.. | .-+.+.++. | +.+++|+||+|||++|++++++.
T Consensus 58 ela~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~s~~GR~~~~l~~~---~---~~~~~lGIDiGgt~i~~~l~d~~ 128 (429)
T 1z05_A 58 DLSKESELAPASITKITRELID---AHLIHETTVQEAISRGRPAVGLQTN---N---LGWQFLSMRLGRGYLTIALHELG 128 (429)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---TTSEEEECHHHHHHHTSCCEEEEEC---C---TTEEEEEEEEETTEEEEEEEETT
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCCEEeccccCCCCCCCCCeEEEEC---C---CCCEEEEEEECCCEEEEEEECCC
Confidence 5556667888888888887766 56632210 0 012222222 2 45789999999999999999998
Q ss_pred CCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeec-c--CCceEEee
Q 019310 116 GREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQT-S--IASGDLIK 192 (343)
Q Consensus 116 g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGftFSfPv~q~-~--i~~g~Li~ 192 (343)
|+ ++.. ..++.|. .+.+++++.|++.|.+++++.+... .+...+|+++++|++.. + +...++ .
T Consensus 129 G~---il~~--~~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~~~g~v~~~~~l-~ 194 (429)
T 1z05_A 129 GE---VLID--TKIDIHE----IDQDDVLARLLFEIEEFFQTYAAQL----DRVTSIAITLPGLVNSEQGIVLQMPHY-N 194 (429)
T ss_dssp SC---EEEE--EEEECCC----CBHHHHHHHHHHHHHHHHHHTTTTC----CEEEEEEEEESSEEETTTTEEEECSSS-B
T ss_pred CC---EEEE--EEEcCCC----CCHHHHHHHHHHHHHHHHHhcCCCc----CceEEEEEeccCcEeCCCCeEeecCCC-C
Confidence 75 4433 2344442 2478999999999999998875432 36788999999999852 3 112223 3
Q ss_pred eccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccccceeEEcccCcCCC
Q 019310 193 WTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVERAHAIPK 268 (343)
Q Consensus 193 WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~----~~~~~iglIlGTGtNa~y~e~~~~I~k 268 (343)
|.. .++.+.|++.+ ++| |.|.||+.+.++++.+. +.++.+.+++|||++++++.+++.+.+
T Consensus 195 w~~---------~~l~~~L~~~~---~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G 259 (429)
T 1z05_A 195 VKN---------LALGPEIYKAT---GLP---VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQG 259 (429)
T ss_dssp CSS---------BCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEECCT
T ss_pred CCC---------CCHHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEECCEEeeC
Confidence 643 78999999988 888 89999999999999873 568899999999999999999998888
Q ss_pred CCCCCCCCCcEEEEe
Q 019310 269 WHGLLPKSGEMVINM 283 (343)
Q Consensus 269 ~~~~~~e~~~miINt 283 (343)
..+.++|.|||.++-
T Consensus 260 ~~g~AGEiGH~~v~~ 274 (429)
T 1z05_A 260 RHGNIGELGHIQIDP 274 (429)
T ss_dssp TTTCTTBCTTSBCCT
T ss_pred CCCcccccCceEEcC
Confidence 888888999999874
No 9
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.70 E-value=2.3e-16 Score=154.33 Aligned_cols=208 Identities=12% Similarity=0.154 Sum_probs=152.8
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC---CCcceeeecccccCCCCcccccEEEEeeCCceEEEEEEEeCCCcc
Q 019310 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEG---GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREG 119 (343)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~---~s~l~MlPs~v~~lP~G~E~G~fLaIDlGGTNlRv~lV~l~g~~~ 119 (343)
++.+...++...+.++.+++.+ +||-.+. .+.-=--|+.+.-- .+.+.+|+||+|||++|++++++.|+
T Consensus 38 ~la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~~~GR~~~~l~~~---~~~~~~lGIDiGgt~i~~~l~d~~G~-- 109 (380)
T 2hoe_A 38 ELAEELGLTKTTVGEIAKIFLE---KGIVVEEKDSPKGVGRPTKSLKIS---PNCAYVLGIEVTRDEIAACLIDASMN-- 109 (380)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---HTSEEEEECCC----CCCEEEEEC---GGGCEEEEEEECSSEEEEEEEETTCC--
T ss_pred HHHHHHCcCHHHHHHHHHHHHH---CCCEEeecCCCCCCCCCceEEEEc---cCCCeEEEEEECCCEEEEEEECCCCC--
Confidence 5556666898888888887765 6763211 11100111111111 24578999999999999999999876
Q ss_pred eeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeee-cc--CCceEEeeeccc
Q 019310 120 RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQ-TS--IASGDLIKWTKG 196 (343)
Q Consensus 120 ~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGftFSfPv~q-~~--i~~g~Li~WtKg 196 (343)
++.. ..++.|.. .+.+++++.+++.|.+++++.+... .+...+|+++++|++. ++ ....++ .|..
T Consensus 110 -vl~~--~~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~~~g~v~~~~~l-~w~~- 177 (380)
T 2hoe_A 110 -ILAH--EAHPLPSQ---SDREETLNVMYRIIDRAKDMMEKLG----SKLSALTVAAPGPIDTERGIIIDPRNF-PLSQ- 177 (380)
T ss_dssp -EEEE--EEEECCSS---CCHHHHHHHHHHHHHHHHHHHHHTT----CCCCEEEEEESSCEETTTTEECCCSSC-TTBT-
T ss_pred -EEEE--EEEccCCC---CCHHHHHHHHHHHHHHHHHhcCCCc----CcEEEEEEEeeccEECCCCEEeccCCC-CCcC-
Confidence 4433 23444432 3578999999999999998764321 3567899999999985 33 233344 5653
Q ss_pred cccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccccCC--CcEEEEEEccccceeEEcccCcCCCCCCCCC
Q 019310 197 FSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK--DAIAAVILGTGTNAAYVERAHAIPKWHGLLP 274 (343)
Q Consensus 197 F~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~~--~~~iglIlGTGtNa~y~e~~~~I~k~~~~~~ 274 (343)
.++.+.|++.+ ++| |.|.||+.++++++.+.+. ++.+.+++|||++++++.+++.+.+..+..+
T Consensus 178 --------~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~aG 243 (380)
T 2hoe_A 178 --------IPLANLLKEKY---GIE---VWVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDGELYRGENGYAG 243 (380)
T ss_dssp --------SCHHHHHHHHH---CSE---EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETTEECCCSSSCCC
T ss_pred --------CChHHHHHHHh---CCC---EEEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECCEEeccCCCccc
Confidence 78999999988 787 8999999999999987543 8899999999999999999999888888888
Q ss_pred CCCcEEEEec
Q 019310 275 KSGEMVINME 284 (343)
Q Consensus 275 e~~~miINtE 284 (343)
|.|||.++-+
T Consensus 244 EiGh~~v~~~ 253 (380)
T 2hoe_A 244 EIGYTRVFNG 253 (380)
T ss_dssp CGGGCEEECS
T ss_pred cccceEecCC
Confidence 9999999754
No 10
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=99.70 E-value=4.1e-16 Score=153.46 Aligned_cols=210 Identities=12% Similarity=0.127 Sum_probs=151.8
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCC----CcceeeecccccCCCCcccccEEEEeeCCceEEEEEEEeCCCc
Q 019310 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG----SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGRE 118 (343)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~----s~l~MlPs~v~~lP~G~E~G~fLaIDlGGTNlRv~lV~l~g~~ 118 (343)
++.+.+.++...+.++.++|.+ +||-.+.. +.----|..+.--| +.+++|+||+|||++|++++++.|+
T Consensus 35 ~la~~~~ls~~tv~~~v~~L~~---~g~i~~~~~~~~~~~GR~~~~l~~~~---~~~~~lgiDiG~t~i~~~l~d~~G~- 107 (406)
T 1z6r_A 35 DLSRLAQLAPASITKIVHEMLE---AHLVQELEIKEAGNRGRPAVGLVVET---EAWHYLSLRISRGEIFLALRDLSSK- 107 (406)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH---HTSEEEC-------------CEEECC---TTCEEEEEEEETTEEEEEEEETTCC-
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCcEEeecccCCCCCCCCCeEEEEcC---CccEEEEEEEcCCEEEEEEEcCCCC-
Confidence 6667777888888888888766 67632211 11111222222112 4578999999999999999999876
Q ss_pred ceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEeeeccccc
Q 019310 119 GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFS 198 (343)
Q Consensus 119 ~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGftFSfPv~q~~i~~g~Li~WtKgF~ 198 (343)
++... .++.|. .+.+++++.|++.|.+++++.+... .+...+|+++++|++.. .+.+. +...+
T Consensus 108 --il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~~---~g~v~-~~~~l- 170 (406)
T 1z6r_A 108 --LVVEE--SQELAL----KDDLPLLDRIISHIDQFFIRHQKKL----ERLTSIAITLPGIIDTE---NGIVH-RMPFY- 170 (406)
T ss_dssp --EEEEE--EEECCS----SCSSCHHHHHHHHHHHHHHHTGGGC----CCEEEEEEEESSEEETT---TTEEE-ECTTC-
T ss_pred --EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcCCCc----CceeEEEEEeecCEeCC---CCEEe-cCCCC-
Confidence 44332 344432 3568999999999999998765322 35788999999999852 34443 22211
Q ss_pred cCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccccceeEEcccCcCCCCCCCCC
Q 019310 199 IEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLP 274 (343)
Q Consensus 199 ~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~----~~~~~iglIlGTGtNa~y~e~~~~I~k~~~~~~ 274 (343)
++..+.++.+.|++.+ ++| |.|.||+.++.+++.+. +.++.+.+++|||++++++.+++.+.+.++.++
T Consensus 171 -~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~AG 243 (406)
T 1z6r_A 171 -EDVKEMPLGEALEQHT---GVP---VYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLV 243 (406)
T ss_dssp -TTCSSBCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEETTTTSSCCB
T ss_pred -CCccCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEECCEEeecCCCcCc
Confidence 1122478999999988 888 89999999999999863 567899999999999999999998888888788
Q ss_pred CCCcEEEEe
Q 019310 275 KSGEMVINM 283 (343)
Q Consensus 275 e~~~miINt 283 (343)
|.|||.++-
T Consensus 244 EiGh~~v~~ 252 (406)
T 1z6r_A 244 EIGHTQVDP 252 (406)
T ss_dssp CGGGSBSCT
T ss_pred cCCceEecC
Confidence 999998863
No 11
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=99.69 E-value=1.3e-16 Score=151.68 Aligned_cols=162 Identities=19% Similarity=0.260 Sum_probs=129.2
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeee
Q 019310 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (343)
Q Consensus 95 G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGf 174 (343)
+++|+||+|||++|++++++.|+ ++.. .+++.|.. .+.+++++.|++.|.+++++.+... .+...+|+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~---il~~--~~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~~igi 73 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGV---VQQK--WSIETNIL---EDGKHIVPSIIESIRHRIDLYNMKK----EDFVGIGM 73 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEE--EEEECCCT---TTTTTHHHHHHHHHHHHHHHTTCCG----GGEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEE--EEEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCCc----cceeEEEE
Confidence 57899999999999999999875 4432 24444432 3578999999999999998876432 35788999
Q ss_pred eeeeeeeec-c--CCceEEeeeccccccCCCCCC-cHHHHHHHHHHHcCCCceEEEEEechHHHHhccccc----CCCcE
Q 019310 175 TFSFPVRQT-S--IASGDLIKWTKGFSIEDTVGE-DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAI 246 (343)
Q Consensus 175 tFSfPv~q~-~--i~~g~Li~WtKgF~~~~~~G~-dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~----~~~~~ 246 (343)
++++|++.. + +...++ .|.. . ++.+.|++.+ ++| +.|.||+.++++++.+. +.++.
T Consensus 74 ~~pG~vd~~~g~v~~~~~l-~w~~---------~~~l~~~l~~~~---~~p---v~v~ND~~aaa~~e~~~g~~~~~~~~ 137 (326)
T 2qm1_A 74 GTPGSVDIEKGTVVGAYNL-NWTT---------VQPVKEQIESAL---GIP---FALDNDANVAALGERWKGAGENNPDV 137 (326)
T ss_dssp EESSEEETTTTEEECBGGG-TBCS---------CBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCE
T ss_pred ecccceeCCCCEEEecCCC-CccC---------CchHHHHHHHHh---CCC---EEEecHHHHHHHHHHHhCCCCCCCcE
Confidence 999999852 2 122223 4543 6 8999999988 788 89999999999999773 56789
Q ss_pred EEEEEccccceeEEcccCcCCCCCCCCCCCCcEEEEec
Q 019310 247 AAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINME 284 (343)
Q Consensus 247 iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miINtE 284 (343)
+.+++|||++++++.+++.+.+.++..+|.|||.++.+
T Consensus 138 ~~l~~GtGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~~ 175 (326)
T 2qm1_A 138 IFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPN 175 (326)
T ss_dssp EEEEESSSEEEEEEETTEECCCSSSCTTCGGGSBSCTT
T ss_pred EEEEECCceEEEEEECCEEeecCCCcccccCcEEECCC
Confidence 99999999999999999988888888889999998753
No 12
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=99.63 E-value=1.4e-15 Score=146.02 Aligned_cols=156 Identities=17% Similarity=0.281 Sum_probs=124.2
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGft 175 (343)
.+|+||+|||++|++++++.|+ ++.. .+++.|. .+.+++++.|.+.|.+++.+.+ ....+|++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~---il~~--~~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLE---RVAT--ERVPTPT----DDYPLLLETIAGLVAKYDQEFA--------CEGKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEE--EEEECCT----TCHHHHHHHHHHHHHHHHHHHT--------SCCEEEEE
T ss_pred EEEEEEECCCEEEEEEEeCCCc---EEEE--EEecCCC----CCHHHHHHHHHHHHHHHHHhcC--------CccEEEEE
Confidence 7999999999999999999876 5432 2444443 2678999999999999887653 24679999
Q ss_pred eeeeeee-cc-CCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhccccc----CCCcEEEE
Q 019310 176 FSFPVRQ-TS-IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAV 249 (343)
Q Consensus 176 FSfPv~q-~~-i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~----~~~~~igl 249 (343)
+++|++. ++ +...++ .| ..+.++.+.|++.+ ++| |.|.||+.+..+++.+. +.++.+.+
T Consensus 88 ~pG~vd~~~g~v~~~~~-~~--------~~~~~l~~~l~~~~---~~p---V~v~NDa~aaalgE~~~g~~~~~~~~~~l 152 (327)
T 4db3_A 88 LPGMEDADDATVLTVNV-PA--------AKGKPLRADLEAKI---GRS---VKIENDANCFALSEAWDEELQDAPSVMGL 152 (327)
T ss_dssp ESEEECTTTCCEEESSS-GG--------GTTSCHHHHHHHHH---SSC---CEEEEHHHHHHHHHHTSTTTTTCSEEEEE
T ss_pred eeccEeCCCCEEEcCCC-cc--------ccCCCHHHHHHHHH---CCC---EEEecchhHHHHHHHHhCCCCCCCcEEEE
Confidence 9999984 33 222222 22 12478999999998 888 89999999999999874 46789999
Q ss_pred EEccccceeEEcccCcCCCCCCCCCCCCcEEEEe
Q 019310 250 ILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINM 283 (343)
Q Consensus 250 IlGTGtNa~y~e~~~~I~k~~~~~~e~~~miINt 283 (343)
++|||++++++.+.+.+.+..+.++|.|||.++-
T Consensus 153 ~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~ 186 (327)
T 4db3_A 153 ILGTGFGGGLIYEGKVFSGRNNVAGELGHMRLPL 186 (327)
T ss_dssp EESSSEEEEEEETTEECCCTTSCTTCGGGSBCCH
T ss_pred EeCccceEEEEECCEEeecCCCcCcccccEEecc
Confidence 9999999999999998888888888999998865
No 13
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=99.62 E-value=8.5e-16 Score=146.92 Aligned_cols=153 Identities=21% Similarity=0.333 Sum_probs=123.6
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeee
Q 019310 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (343)
Q Consensus 95 G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGf 174 (343)
+++|+||+|||++|++++++.|+ ++.. .+++.| .+.+++++.|++.|.+++++. +...+|+
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~---i~~~--~~~~~~-----~~~~~~~~~i~~~i~~~~~~~---------~i~gigi 62 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGR---ILST--FKVATP-----PTAEGIVDAICAAVAGASEGH---------DVEAVGI 62 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCC---BCCC--EEEECC-----SSHHHHHHHHHHHHHHHHTTC---------CEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEE--EEeeCC-----CCHHHHHHHHHHHHHHHHhhc---------CceEEEE
Confidence 46899999999999999999876 4322 223332 357899999999999987532 4688999
Q ss_pred eeeeeeeec-c--CCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccc----cCCCcEE
Q 019310 175 TFSFPVRQT-S--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIA 247 (343)
Q Consensus 175 tFSfPv~q~-~--i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y----~~~~~~i 247 (343)
+.+.|++.. + ....++ .|.. .++.+.|++.+ ++| |.|.||+.+..+++.+ ++.++.+
T Consensus 63 ~~pG~vd~~~g~v~~~~~l-~w~~---------~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~ 126 (321)
T 3vgl_A 63 GAAGYVDDKRATVLFAPNI-DWRH---------EPLKDKVEQRV---GLP---VVVENDANAAAWGEYRFGAGQGHDDVI 126 (321)
T ss_dssp EESSEECTTSSCEEECSSS-CCEE---------ECHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEE
T ss_pred eccccEeCCCCEEEeCCCC-CCcC---------CCHHHHHhhhh---CCC---EEEEehhhhHHHHHHHhCCCCCCCCEE
Confidence 999999843 3 223344 6754 78999999998 888 8999999999999987 3568899
Q ss_pred EEEEccccceeEEcccCcCCCCCCCCCCCCcEEEE
Q 019310 248 AVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVIN 282 (343)
Q Consensus 248 glIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miIN 282 (343)
.+++|||++++++.+.+.+.+.++..+|.|||.++
T Consensus 127 ~l~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~ 161 (321)
T 3vgl_A 127 CITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVV 161 (321)
T ss_dssp EEEESSSEEEEEEETTEECCCTTSCCCCGGGSBSS
T ss_pred EEEeCcceEEEEEECCEEecCCCCCCccccceEec
Confidence 99999999999999999888888888899999875
No 14
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=99.61 E-value=1.5e-15 Score=148.85 Aligned_cols=160 Identities=18% Similarity=0.159 Sum_probs=123.7
Q ss_pred ccccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHH---HHHHHHHhcCCCCCCCCCCe
Q 019310 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAA---ALAKFVATEGEGFHVSPGRQ 169 (343)
Q Consensus 93 E~G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~---~I~~fl~~~~~~~~~~~~~~ 169 (343)
+.+.+|++|+|||++|+++++ .|+ ++... .+++.|. . +.+++++.|++ .|.+++. .+.
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d-~G~---il~~~-~~~~~~~--~--~~~~~l~~i~~~~~~i~~~~~----------~~i 67 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ-GGK---EIADP-VVLPACA--D--CLDKCLGNLVEGFKAIQAGLP----------EAP 67 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-TTE---ECSCC-EEEECCT--T--CHHHHHHHHHHHHHHHHTTCS----------SCC
T ss_pred CCCEEEEEEECcceEEEEEEE-CCE---EEEEE-EEEECCC--C--CHHHHHHHHHHHHHHHHHHhh----------cCC
Confidence 467899999999999999999 764 33211 1344443 2 67899999988 6666543 146
Q ss_pred eeeeeeeeeeeee-cc--CCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccccC----
Q 019310 170 RELGFTFSFPVRQ-TS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN---- 242 (343)
Q Consensus 170 l~lGftFSfPv~q-~~--i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~---- 242 (343)
..+|+++++|++. ++ ....++..|.. +.|+.+.|++.+ ++| |.|.||+.+..+++.+.+
T Consensus 68 ~gIGIavPG~Vd~~~G~i~~~~nlp~w~~--------~~~l~~~L~~~~---g~P---V~veNDanaaAlgE~~~G~~p~ 133 (366)
T 3mcp_A 68 VAISFAFPGPADYQAGIIGDLPNFPSFRG--------GVALGPFLEDIF---GIP---VFINNDGSLFAYGEALTGVLPE 133 (366)
T ss_dssp CEEEEECCSSEETTTTEECCCTTCGGGTT--------CBCHHHHHHHHH---CSC---EEEECHHHHHHHHHHHTSHHHH
T ss_pred eEEEEEecceEeCCCCEEEeCCCcccccC--------CCCHHHHHHHHH---CCC---EEEechhhHHHHHHHHhCCCcc
Confidence 7899999999994 33 23344446651 378999999999 888 899999999999997754
Q ss_pred -------------CCcEEEEEEccccceeEEcccCcCCCCCCCCCCCCcEEEEecCCC
Q 019310 243 -------------KDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGN 287 (343)
Q Consensus 243 -------------~~~~iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miINtEwG~ 287 (343)
.++.+.+.+|||.+++++.+++.+.+.++.++|.|||. | .+|.
T Consensus 134 ~~~~l~~~g~~~~~~~~v~l~lGtGIG~givi~G~l~~G~~g~AGEiGH~~-~-~CG~ 189 (366)
T 3mcp_A 134 INRRLREAGSTKRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLR-N-KKYP 189 (366)
T ss_dssp HHHHHHHTTCCCCCCEEEEEEESSSEEEEEEETTEECCCTTSCTTCCTTSB-C-SSCT
T ss_pred cccccccccccCCCCcEEEEEECCcceEEEEECCEEecCCCCCCceeeccc-C-CCCC
Confidence 57899999999999999999998888888888999998 5 4443
No 15
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=99.60 E-value=3.6e-15 Score=142.37 Aligned_cols=158 Identities=17% Similarity=0.252 Sum_probs=123.5
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeee
Q 019310 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (343)
Q Consensus 95 G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGf 174 (343)
+.+|+||+|||++|++++++.|+ ++.. .+++.|. .+.+++++.|.+.|.++..+.+ ....+|+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~---il~~--~~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRR---LQWE--KRVPTPH----TSYSAFLDAVCELVEEADQRFG--------VKGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEE--EEEECCC----SCHHHHHHHHHHHHHHHHHHHT--------SCCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCC---EEEE--EEecCCC----CCHHHHHHHHHHHHHHHHHhcC--------CccEEEE
Confidence 57999999999999999999875 4432 2344443 2568899999999998876542 2457999
Q ss_pred eeeeeeeec-c-CCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhccccc----CCCcEEE
Q 019310 175 TFSFPVRQT-S-IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAA 248 (343)
Q Consensus 175 tFSfPv~q~-~-i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~----~~~~~ig 248 (343)
++++|++.. + +...++..| .+.++.+.|++.+ ++| |.|.||+.+.++++.+. +.++.+.
T Consensus 87 ~~pG~vd~~~g~v~~~~~~~~---------~~~~l~~~l~~~~---~~p---v~v~NDa~aaalgE~~~g~~~~~~~~v~ 151 (327)
T 2ap1_A 87 GIPGMPETEDGTLYAANVPAA---------SGKPLRADLSARL---DRD---VRLDNDANCFALSEAWDDEFTQYPLVMG 151 (327)
T ss_dssp EESSBSCCTTSCCBCTTCTTT---------TTSCHHHHHHHHH---TSC---EEEEEHHHHHHHHHHTSTTGGGCSEEEE
T ss_pred EeeeeEECCCCEEEccCCCcc---------CCCChHHHHHHHH---CCC---EEEecHHHHHHHHHHHhCcCCCCCcEEE
Confidence 999999853 3 211223334 3478999999988 788 89999999999999864 4578999
Q ss_pred EEEccccceeEEcccCcCCCCCCCCCCCCcEEEEec
Q 019310 249 VILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINME 284 (343)
Q Consensus 249 lIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miINtE 284 (343)
+++|||++++++.+.+.+.+..+..+|.|||.++..
T Consensus 152 l~~GtGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~~ 187 (327)
T 2ap1_A 152 LILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVD 187 (327)
T ss_dssp EEESSSEEEEEEETTEEECCTTSCTTCGGGSBCCHH
T ss_pred EEECCcEEEEEEECCEEeecCCCcccccccEEEecC
Confidence 999999999999999888888777788999988754
No 16
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=99.59 E-value=3e-15 Score=142.19 Aligned_cols=156 Identities=16% Similarity=0.136 Sum_probs=122.9
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGft 175 (343)
++|+||+|||++|++++++.+ ++. ..+++.|.. ..+++++.|++.|.+++++.. .+...+|++
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~----~l~--~~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~-------~~i~gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKR----LLS--KVVVPTPKE----GGERVAEALAEAAERAEREAG-------VRGEAIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSS----BSC--CEEEECCSS----CHHHHHHHHHHHHHHHHHHHT-------CCCSSEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCCC----cEE--EEEEcCCCC----ChHHHHHHHHHHHHHHHhhcc-------CCceEEEEE
Confidence 479999999999999999863 221 134444432 238999999999999987652 246789999
Q ss_pred eeeeeee-cc--CCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccc----cCCCcEEE
Q 019310 176 FSFPVRQ-TS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAA 248 (343)
Q Consensus 176 FSfPv~q-~~--i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y----~~~~~~ig 248 (343)
++.|++. ++ ....++..|.. .++.+.|++.+ ++| |.|.||+.+..+++.+ ++.++.+.
T Consensus 65 ~pG~vd~~~g~v~~~~~~~~w~~---------~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~ 129 (302)
T 3vov_A 65 TPGPLDFRRGVIRFAPNIPGVQD---------FPIRRILEEAT---GRP---VFLENDANAAALAEHHLGAAQGEESSLY 129 (302)
T ss_dssp ESSCEETTTTEEC---CCTTCTT---------CCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEE
T ss_pred ecccEeCCCCEEEcCCCCCCcCC---------CChHHHHHHhh---CCC---EEEEechHHHHHHHHHhCCCCCCCCEEE
Confidence 9999994 33 22334446754 88999999988 888 8999999999999987 35688999
Q ss_pred EEEccccceeEEcccCcCCCCCCCCCCCCcEEEEe
Q 019310 249 VILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINM 283 (343)
Q Consensus 249 lIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miINt 283 (343)
+++|||.+++++.+.+.+.+.++..+|.|||.++-
T Consensus 130 l~~GtGiG~gii~~g~l~~G~~g~aGEiGh~~v~~ 164 (302)
T 3vov_A 130 LTVSTGIGGGVVLGGRVLRGERGQGGELGHLTLLP 164 (302)
T ss_dssp EEESSSEEEEEEETTEECCCTTSCTTCGGGSBSST
T ss_pred EEECCceeEEEEECCEEeeCCCCCCccccceEecC
Confidence 99999999999999998888888888999998753
No 17
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=99.59 E-value=3.2e-15 Score=141.58 Aligned_cols=151 Identities=17% Similarity=0.245 Sum_probs=115.5
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGft 175 (343)
++|++|+|||++|++++++.|+ ++.. .+++.|. .+.+++++.|.+ ++++. .+...+|++
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~---il~~--~~~~~~~----~~~~~~~~~i~~----~~~~~--------~~i~gigi~ 63 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGE---IILT--KSAEISG----SDGDQILAEMKV----FLAEN--------TDVTGIAVS 63 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEE--EEEECST----TCHHHHHHHHHH----HHHTC--------TTCCEEEEE
T ss_pred EEEEEEeCCCeEEEEEECCCCC---EEEE--EEecCCC----CCHHHHHHHHHH----HHhhc--------CCeeEEEEe
Confidence 6899999999999999999876 5533 2344442 234566665554 44332 246789999
Q ss_pred eeeeeee-cc--CCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccc----cCCCcEEE
Q 019310 176 FSFPVRQ-TS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAA 248 (343)
Q Consensus 176 FSfPv~q-~~--i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y----~~~~~~ig 248 (343)
+++|++. ++ +...++..|.. .++.+.|++.+ ++| |.|.||+.+..+++.+ ++.++.+.
T Consensus 64 ~pG~vd~~~g~v~~~~~l~~w~~---------~~l~~~l~~~~---~~p---V~v~NDa~aaal~E~~~g~~~~~~~~~~ 128 (297)
T 4htl_A 64 APGYVNPKTGLITMGGAIRRFDN---------FNLKEWLEAET---GLP---VAIENDANCALLAEKWLGKGQDLDDFLC 128 (297)
T ss_dssp ESSEECTTTCEEEECTTCGGGTT---------EEHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEE
T ss_pred cCcceeCCCCEEEeCCCCCCccC---------CCHHHHHHHHH---CcC---EEEecHHHHHHHHHHHhCCCCCCCcEEE
Confidence 9999984 22 11223334543 78999999988 888 8999999999999987 35688999
Q ss_pred EEEccccceeEEcccCcCCCCCCCCCCCCcEEEE
Q 019310 249 VILGTGTNAAYVERAHAIPKWHGLLPKSGEMVIN 282 (343)
Q Consensus 249 lIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miIN 282 (343)
+++|||++++++.+.+.+.+.++..+|.|||+++
T Consensus 129 l~~GtGiG~giv~~G~l~~G~~g~aGEiGh~~~~ 162 (297)
T 4htl_A 129 LTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSE 162 (297)
T ss_dssp EEESSSEEEEEEETTEECCCTTSCCCCGGGSBSS
T ss_pred EEECcceEEEEEECCEEEecCCCCcccccceEec
Confidence 9999999999999999888888888899999875
No 18
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=99.58 E-value=1.1e-14 Score=140.11 Aligned_cols=158 Identities=22% Similarity=0.258 Sum_probs=125.1
Q ss_pred cccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeee
Q 019310 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (343)
Q Consensus 94 ~G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lG 173 (343)
.+++|+||+|||++|++++++.|+ ++... .++.| .+.+++++.|.+.|.+++++..... .+...+|
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~~~~~~----~~i~gig 94 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGE---IVKKY--TQFNP-----KTYEERINLILQMCVEAAAEAVKLN----CRILGVG 94 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEECC-----SSHHHHHHHHHHHHHHHHHHHHHTT----EEEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCCCc---EEEEE--EEcCC-----CCHHHHHHHHHHHHHHHHHhccccc----CceEEEE
Confidence 468999999999999999999875 44322 33333 2467889999999999987653221 3567899
Q ss_pred eeeeeeeeeccCCceEEe-------eeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhccccc----C
Q 019310 174 FTFSFPVRQTSIASGDLI-------KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----N 242 (343)
Q Consensus 174 ftFSfPv~q~~i~~g~Li-------~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~----~ 242 (343)
++++.|++.. .+.+. .|. +.++.+.|++.+ ++| |.|.||+.+.++++.+. +
T Consensus 95 i~~pG~vd~~---~g~v~~~~~~~~~w~---------~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~ 156 (343)
T 2yhw_A 95 ISTGGRVNPR---EGIVLHSTKLIQEWN---------SVDLRTPLSDTL---HLP---VWVDNDGNCAALAERKFGQGKG 156 (343)
T ss_dssp EEESSEEETT---TTEEEECCTTSSSCS---------SEECHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSTTTT
T ss_pred EecccCEeCC---CCEEEeCCcCCCCCc---------CCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhCCCCC
Confidence 9999999852 23232 454 378999999988 888 89999999999999863 4
Q ss_pred CCcEEEEEEccccceeEEcccCcCCCCCCCCCCCCcEEEEe
Q 019310 243 KDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINM 283 (343)
Q Consensus 243 ~~~~iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miINt 283 (343)
.++.+.+++|||++++++.+.+.+.+..+..+|.|||.++-
T Consensus 157 ~~~~v~i~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~~~~ 197 (343)
T 2yhw_A 157 LENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSL 197 (343)
T ss_dssp CSCEEEEEESSSEEEEEEETTEECCCTTSCTTCGGGCBCCC
T ss_pred CCcEEEEEECCCEEEEEEECCEEecCCCCcccccCCEEEcc
Confidence 57899999999999999999998888888788999999864
No 19
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=99.57 E-value=7.5e-15 Score=137.49 Aligned_cols=155 Identities=16% Similarity=0.209 Sum_probs=118.8
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGft 175 (343)
++|+||+|||++|++++++.|+ ++.. .+++.+.. .+.+++++.|.+.+.+++.+ ...+|++
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~---il~~--~~~~~~~~---~~~~~~~~~i~~~i~~~~~~-----------~~~igi~ 62 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQ---IRDR--RELPTPAS---QTPEALRDALSALVSPLQAH-----------AQRVAIA 62 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEE--EEEECCSS---CCHHHHHHHHHHHHTTTGGG-----------CSEEEEE
T ss_pred eEEEEEeCCCEEEEEEECCCCC---EEEE--EEecCCCC---CCHHHHHHHHHHHHHHHHhh-----------CCEEEEE
Confidence 4799999999999999999775 4432 23444321 34788999888888776542 1259999
Q ss_pred eeeeeeec-c--CCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccccCCC---cEEEE
Q 019310 176 FSFPVRQT-S--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKD---AIAAV 249 (343)
Q Consensus 176 FSfPv~q~-~--i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~~~---~~igl 249 (343)
.+.|++.. + +...++..|.. .++.+.|++.+ ++| +.|.||+.+.++++.+.... +.+.+
T Consensus 63 ~pG~vd~~~g~v~~~~~~~~w~~---------~~l~~~l~~~~---~~p---v~v~NDa~aaa~~e~~~g~~~~~~~v~l 127 (289)
T 2aa4_A 63 STGIIRDGSLLALNPHNLGGLLH---------FPLVKTLEQLT---NLP---TIAINDAQAAAWAEFQALDGDITDMVFI 127 (289)
T ss_dssp ESSEEETTEEECSSGGGGGGGTT---------CCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSCTTCCCEEEE
T ss_pred eccceeCCCCEEEeCCCCCcccC---------CChHHHHHHHH---CCC---EEEechHHHHHHHHHHhCCCCCceEEEE
Confidence 99999842 2 22333334654 78999999988 888 89999999999999774321 89999
Q ss_pred EEccccceeEEcccCcCCCCCCCCCCCCcEEEEec
Q 019310 250 ILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINME 284 (343)
Q Consensus 250 IlGTGtNa~y~e~~~~I~k~~~~~~e~~~miINtE 284 (343)
++|||++++++.+.+.+.+.++..+|.|||.++..
T Consensus 128 ~~GtGiG~gii~~G~l~~G~~g~aGE~Gh~~~~~~ 162 (289)
T 2aa4_A 128 TVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPH 162 (289)
T ss_dssp EESSSEEEEEEETTEEECCTTSCCCCGGGSBSCTT
T ss_pred EeCccEEEEEEECCEEeeCCCCCCccCCcEEECCC
Confidence 99999999999999888888887888999988643
No 20
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=99.57 E-value=2.9e-14 Score=132.72 Aligned_cols=161 Identities=18% Similarity=0.315 Sum_probs=114.4
Q ss_pred CCcccccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCe
Q 019310 90 TGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (343)
Q Consensus 90 ~G~E~G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~ 169 (343)
...+..++|++|+|||++|++++++.+. .+... ..+++.|. ..+.+++++.|.+.+.+++++.... ...
T Consensus 7 ~~~~~~~~lgidiggt~i~~~l~dl~~g--~i~~~-~~~~~~~~---~~~~~~~~~~i~~~i~~~~~~~~~~-----~~~ 75 (267)
T 1woq_A 7 KSHKNAPLIGIDIGGTGIKGGIVDLKKG--KLLGE-RFRVPTPQ---PATPESVAEAVALVVAELSARPEAP-----AAG 75 (267)
T ss_dssp ----CCCEEEEEECSSEEEEEEEETTTT--EEEEE-EEEEECCS---SCCHHHHHHHHHHHHHHHHTSTTCC-----CTT
T ss_pred hcCCCCEEEEEEECCCEEEEEEEECCCC--eEEEE-EEecCCCc---cCCHHHHHHHHHHHHHHHHHhcccc-----Ccc
Confidence 3345567999999999999999999732 13321 12344332 1357889999999999998654311 123
Q ss_pred eeeeeeeeeeeeecc--CCceEEe-eeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhccccc----C
Q 019310 170 RELGFTFSFPVRQTS--IASGDLI-KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----N 242 (343)
Q Consensus 170 l~lGftFSfPv~q~~--i~~g~Li-~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~----~ 242 (343)
..+|+++++|++ ++ +...++. .|. +.++.+.|++.+ ++| |.+.||+.+..+++.+. +
T Consensus 76 ~~igi~~pG~v~-~g~v~~~~~l~~~w~---------~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~ 139 (267)
T 1woq_A 76 SPVGVTFPGIIQ-HGVVHSAANVDKSWL---------NTDIDALLTARL---GRP---VEVINDADAAGLAEARYGAGAG 139 (267)
T ss_dssp CCEEEEESSCEE-TTEECCCTTSCGGGT---------TCBHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHSTTTT
T ss_pred ceEEEEccceEc-CCEEEeCCCCCCCCC---------CCCHHHHHHHHH---CCC---EEEeehhHHHHHHHHHhCCCCC
Confidence 469999999997 22 1122221 354 379999999998 888 89999999999999873 3
Q ss_pred CC-cEEEEEEccccceeEEcccCcCCCCCCCCCCCCcEEEE
Q 019310 243 KD-AIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVIN 282 (343)
Q Consensus 243 ~~-~~iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miIN 282 (343)
.+ ..+.+++|||.+++++.+.+.+.+ +|.|||.++
T Consensus 140 ~~~~~~~l~~GtGIG~giv~~G~l~~G-----gEiGh~~v~ 175 (267)
T 1woq_A 140 VKGTVLVITLGTGIGSAFIFDGKLVPN-----AELGHLEID 175 (267)
T ss_dssp CCSEEEEEEESSSEEEEEEETTEEETT-----CCGGGCEET
T ss_pred CCCcEEEEEECcceEEEEEECCEEccC-----ceeeeEEec
Confidence 33 578999999999999999876554 477888775
No 21
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=99.57 E-value=4.1e-15 Score=142.16 Aligned_cols=162 Identities=15% Similarity=0.196 Sum_probs=123.4
Q ss_pred cccccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeee
Q 019310 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (343)
Q Consensus 92 ~E~G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~ 171 (343)
.+.+++|+||+|||++|++++++.|+ ++.. .+++.|. ..+.+++++.|++.|.++++. . .+...
T Consensus 16 ~~~~~~lgidiggt~i~~~l~d~~g~---il~~--~~~~~~~---~~~~~~~~~~i~~~i~~~~~~-~-------~~i~g 79 (321)
T 3r8e_A 16 YFQGMILGIDVGGTSVKFGLVTPEGE---IQNA--TRFMTAD---WVNGIGFVESMKLEIGNFLKQ-Y-------PIVKG 79 (321)
T ss_dssp ---CCEEEEECCSSEEEEEEECTTCC---EEEE--EEEEHHH---HHTTTCHHHHHHHHHHHHHHH-C-------TTCCE
T ss_pred ccCcEEEEEEECCCEEEEEEEcCCCc---EEEE--EEEeCCC---CCCHHHHHHHHHHHHHHHHhc-c-------CCeeE
Confidence 45678999999999999999999875 5432 2333332 136788999999999999862 1 25678
Q ss_pred eeeeeeeeee-ecc--CCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccc----cCCC
Q 019310 172 LGFTFSFPVR-QTS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKD 244 (343)
Q Consensus 172 lGftFSfPv~-q~~--i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y----~~~~ 244 (343)
+|+++++|++ +++ +...++..|.. .++.+.|++.+. ++| |.|.||+.+..+++.+ ++.+
T Consensus 80 igi~~pG~vd~~~g~v~~~~~l~~w~~---------~~l~~~l~~~~~--~~p---V~v~NDa~aaalaE~~~g~~~~~~ 145 (321)
T 3r8e_A 80 VGIGWPGLVSLDRTKVILLPNIPSVVN---------VPIVEILRSEFP--HIH---FKIENDAKCAALGEYYFGENKRMQ 145 (321)
T ss_dssp EEEEESSEECTTSCCEEEBTTBCCCCS---------CCHHHHHHHHCT--TSE---EEEEEHHHHHHHHHHHHSTTTTCS
T ss_pred EEEEecccEECCCCEEEeCCCCccccC---------CCHHHHHHHHcC--CCC---EEEEchHHHHHHHHHHhCCCCCCC
Confidence 9999999998 333 12223323654 788888887652 466 8999999999999987 3568
Q ss_pred cEEEEEEccccceeEEcccCcCCCCCCCCCCCCcEEEEec
Q 019310 245 AIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINME 284 (343)
Q Consensus 245 ~~iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miINtE 284 (343)
+.+.+++|||++++++.+.+.+.+.++..+|.|||. +..
T Consensus 146 ~~v~l~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~-~~~ 184 (321)
T 3r8e_A 146 TFILLALGTGVGSGVMMNGKLFIGGRGNGTEVGHML-TTR 184 (321)
T ss_dssp SEEEEEESSSEEEEEEETTEECCCTTSCCCCGGGCB-CTT
T ss_pred cEEEEEECCceEEEEEECCEEecCCCCCCccccccc-CCC
Confidence 899999999999999999998888888788899988 544
No 22
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=99.56 E-value=6.6e-15 Score=140.27 Aligned_cols=147 Identities=16% Similarity=0.273 Sum_probs=111.2
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGft 175 (343)
.+|+||+|||++|++++++.|+ ++.. .+ +|.. +.+++++.|++.+. +. +...+|++
T Consensus 4 ~~lgiDiGgt~i~~~l~d~~G~---il~~--~~--~~t~----~~~~~l~~i~~~~~----~~---------~i~gigi~ 59 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGREDGT---IIDR--IE--FPTX----MPDETIEXVIQYFS----QF---------SLQAIGIG 59 (302)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEE--EE--EECC----CHHHHHHHHHHHHT----TS---------CCSEEEEE
T ss_pred EEEEEEECcceeEEEEEECCCc---EEEE--EE--ecCC----ChHHHHHHHHHHhc----cC---------CceEEEEE
Confidence 5899999999999999999876 5432 23 3331 35666666655433 21 35789999
Q ss_pred eeeeeeecc--CCceEE-----eeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccc----cCCC
Q 019310 176 FSFPVRQTS--IASGDL-----IKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKD 244 (343)
Q Consensus 176 FSfPv~q~~--i~~g~L-----i~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y----~~~~ 244 (343)
+++|++... ...+.+ ..|. +.++.+.|++.+ ++| |.+.||+.+..+++.+ ++.+
T Consensus 60 ~pG~vd~~~~~~~~G~i~~~~~~~w~---------~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~G~~~~~~ 124 (302)
T 3epq_A 60 SFGPVDNDXTSQTYGTITATPXAGWR---------HYPFLQTVXNEM---XIP---VGFSTDVNAAALGEFLFGEAXGLD 124 (302)
T ss_dssp ECSSEECCTTSTTTTEECCCSSTTTB---------TCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCS
T ss_pred eceeeccccccccccEEecCCCCCcc---------CCChHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCC
Confidence 999999432 111333 2454 489999999999 888 8999999999999988 3568
Q ss_pred cEEEEEEccccceeEEcccCcCCCCCCCCCCCCcEEEEe
Q 019310 245 AIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINM 283 (343)
Q Consensus 245 ~~iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miINt 283 (343)
+.+.+.+|||++++++.+.+.+.+.. .+|.|||.++-
T Consensus 125 ~~~~l~~GtGiG~gii~~G~l~~G~~--agEiGh~~v~~ 161 (302)
T 3epq_A 125 SCLYITIGTGIGAGAIVEGRLLQGLS--HPEMGHIYIRR 161 (302)
T ss_dssp CEEEEEESSSEEEEEEETTEECCSSS--CCCGGGCCCCC
T ss_pred cEEEEEECCceEEEEEECCEEcccCC--CCccceEEEec
Confidence 89999999999999999988887764 46889998864
No 23
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=99.55 E-value=1.5e-14 Score=138.00 Aligned_cols=162 Identities=17% Similarity=0.173 Sum_probs=116.9
Q ss_pred ccccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 019310 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (343)
Q Consensus 93 E~G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~l 172 (343)
+.+.+|+||+|||++|++++++.|+ ++... +.+.|+. ..+++++.|.+.|.+++++.+. +...+
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~-------~i~gi 68 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGE---TLHCE--KKRTAEV----IAPGLVSGIGEMIDEQLRRFNA-------RCHGL 68 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEEHHHH----HTTCHHHHHHHHHHHHHHHHTE-------EEEEE
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCccc----cHHHHHHHHHHHHHHHHHhcCC-------CeeEE
Confidence 4578999999999999999999876 54322 3333321 2467889999999888876532 45789
Q ss_pred eeeeeeeeee-cc--CCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccc---cCCCcE
Q 019310 173 GFTFSFPVRQ-TS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY---HNKDAI 246 (343)
Q Consensus 173 GftFSfPv~q-~~--i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y---~~~~~~ 246 (343)
|++.++|++. ++ +...++ .|... -+.++.+.|++.+ ++| |.+.||+.+.++++.+ .+.+..
T Consensus 69 gi~~pG~vd~~~g~v~~~~~l-~~~~~------~~~~l~~~l~~~~---~~p---v~v~NDanaaa~~e~~~~~~~~~~~ 135 (310)
T 3htv_A 69 VMGFPALVSKDKRTIISTPNL-PLTAA------DLYDLADKLENTL---NCP---VEFSRDVNLQLSWDVVENRLTQQLV 135 (310)
T ss_dssp EEEESSCBCTTSSCBCSCCSS-SCCHH------HHTTHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHTTCTTSCE
T ss_pred EEeccccEeCCCCEEEeCCCC-CCccc------cCccHHHHHHHHh---CCC---EEEeeHHHHHHHHHHhhcccCCceE
Confidence 9999999984 33 234444 44320 0147889999888 888 8999999999876643 345778
Q ss_pred EEEEEccccceeEEcccCcCCCCCCCCCCCCcEEEEe
Q 019310 247 AAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINM 283 (343)
Q Consensus 247 iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miINt 283 (343)
+.+.+|||++++++.+.+.+.+.++..+|.|||.|+-
T Consensus 136 ~~v~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~ 172 (310)
T 3htv_A 136 LAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGD 172 (310)
T ss_dssp EEEEESSSEEEEEEETTEEECCSSSCCCC--------
T ss_pred EEEEeceeEEEEEEECCEEeecCCCCceeCcceEeCC
Confidence 9999999999999999999999888888999999863
No 24
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=99.50 E-value=2.6e-14 Score=134.11 Aligned_cols=149 Identities=19% Similarity=0.239 Sum_probs=112.3
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGft 175 (343)
.+|+||+|||++|++++++.|+ ++.. .+++.| .+.+++++.|.+.+.+ . +...+|++
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~---il~~--~~~~~~-----~~~~~~~~~i~~~i~~------~-------~i~gigi~ 61 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGK---ILDK--TSISTP-----ENLEDLLAWLDQRLSE------Q-------DYSGIAMS 61 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEE--EEECCC-----SSHHHHHHHHHHHHTT------S-------CCSEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEE--EEEeCC-----CCHHHHHHHHHHHHHh------C-------CCcEEEEE
Confidence 4899999999999999999775 4432 233333 2456676666655443 1 35689999
Q ss_pred eeeeeee-cc--CCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccc--cCCCcEEEEE
Q 019310 176 FSFPVRQ-TS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY--HNKDAIAAVI 250 (343)
Q Consensus 176 FSfPv~q-~~--i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y--~~~~~~iglI 250 (343)
.++|++. ++ ....++..|.. .++.+.| +.+ ++| |.|.||+.+.++++.+ ++.++.+.++
T Consensus 62 ~pG~vd~~~g~v~~~~~~~~~~~---------~~l~~~l-~~~---~~p---v~v~NDa~aaa~~e~~~~~~~~~~v~l~ 125 (292)
T 2gup_A 62 VPGAVNQETGVIDGFSAVPYIHG---------FSWYEAL-SSY---QLP---VHLENDANCVGLSELLAHPELENAACVV 125 (292)
T ss_dssp ESSEECTTTCBEESCCSSGGGSS---------SBHHHHT-GGG---CCC---EEEEEHHHHHHHHHHHHCTTCSSEEEEE
T ss_pred ecCcccCCCCEEEecCCCCcccC---------CCHHHHH-HHc---CCC---EEEechHHHHHHHHHHhcCCCCeEEEEE
Confidence 9999984 33 12233323543 7888888 766 788 8999999999999976 4567899999
Q ss_pred EccccceeEEcccCcCCCCCCCCCCCCcEEEEe
Q 019310 251 LGTGTNAAYVERAHAIPKWHGLLPKSGEMVINM 283 (343)
Q Consensus 251 lGTGtNa~y~e~~~~I~k~~~~~~e~~~miINt 283 (343)
+|||++++++.+++.+.+.++..+|.|||.++.
T Consensus 126 ~GtGiG~giv~~G~l~~G~~g~aGEiGh~~~~~ 158 (292)
T 2gup_A 126 IGTGIGGAMIINGRLHRGRHGLGGEFGYMTTLA 158 (292)
T ss_dssp ESSSEEEEEEETTEEECCTTSCTTCGGGCBSSC
T ss_pred ECCceEEEEEECCEEEecCCCCCccceeEEecc
Confidence 999999999999988888887778899998864
No 25
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=99.38 E-value=4.9e-13 Score=128.28 Aligned_cols=147 Identities=18% Similarity=0.273 Sum_probs=99.5
Q ss_pred cccEEEEeeCCceEEEEEEEe-CCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 019310 94 KGLFYALDLGGTNFRVLRVQL-GGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (343)
Q Consensus 94 ~G~fLaIDlGGTNlRv~lV~l-~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~l 172 (343)
.+++|++|+|||++|++++++ +|. +.. ..++|... .+.+ .+.|.+++++.+. +...+
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~---i~~----~~~~~~~~----~~~~----~~~i~~~~~~~~~-------~i~gi 70 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGE---ISQ----AKTYSGLD----YPSL----EAVIRVYLEEHKV-------EVKDG 70 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCC---EEE----EEEEEGGG----CSCH----HHHHHHHHHHSCC-------CCCEE
T ss_pred CCEEEEEEechhheEEEEEECCCCc---EEE----EEEecCCC----cCCH----HHHHHHHHHhcCC-------CccEE
Confidence 467999999999999999997 454 432 12334321 1233 3444556655431 35689
Q ss_pred eeeeeeeeeeccCCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhccccc-----------
Q 019310 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----------- 241 (343)
Q Consensus 173 GftFSfPv~q~~i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~----------- 241 (343)
|++++.|++...+...++ .|. .+ .+.|++.+ ++| .|.|.||+.+..+++.+.
T Consensus 71 gi~~pG~vd~~~~~~~nl-~w~----------~~-~~~l~~~~---~~p--~V~v~NDanaaalgE~~~~~~~~~~~g~g 133 (332)
T 1sz2_A 71 CIAIACPITGDWVAMTNH-TWA----------FS-IAEMKKNL---GFS--HLEIINDFTAVSMAIPMLKKEHLIQFGGA 133 (332)
T ss_dssp EEEESSCCCSSEECCSSS-CCC----------EE-HHHHHHHH---TCS--EEEEEEHHHHHHHHGGGCCGGGEEECSSC
T ss_pred EEEEeCceeCCEEeeeCC-CCc----------CC-HHHHHHHh---CCC--cEEEEeCHhHHhccccccChhhheecCCC
Confidence 999999998321222222 342 24 46777777 664 378999999999999863
Q ss_pred ---CCCcEEEEEEccccceeEEcccCcCCCCCCCCCCCCcEEE
Q 019310 242 ---NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVI 281 (343)
Q Consensus 242 ---~~~~~iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miI 281 (343)
+.++.+.+++|||.+++++.+.+ .+..+...|.+||.+
T Consensus 134 ~~~~~~~~~~v~~GTGiG~giv~~g~--~G~~g~agE~GH~~v 174 (332)
T 1sz2_A 134 EPVEGKPIAVYGAGTGLGVAHLVHVD--KRWVSLPGEGGHVDF 174 (332)
T ss_dssp CCCTTCCEEEEEESSSEEEEEEEEET--TEEEEEECCGGGSBC
T ss_pred CCCCCCcEEEEEcCccceEEEEecCC--CCeeeCCCCccccCc
Confidence 34778999999999999999876 555444567777655
No 26
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=99.38 E-value=3.2e-13 Score=131.53 Aligned_cols=156 Identities=13% Similarity=0.110 Sum_probs=106.7
Q ss_pred cccEEEEeeCCceEEEEEEEe----CCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCe
Q 019310 94 KGLFYALDLGGTNFRVLRVQL----GGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (343)
Q Consensus 94 ~G~fLaIDlGGTNlRv~lV~l----~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~ 169 (343)
.+.+|++|+|||++|++++++ .|+ ++... + ..|. .+.+++++.|++.+.++..... .+.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~---il~~~--~-~~~~----~~~~~~~~~i~~~i~~~~~~~~-------~~i 90 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVH---ACVTR--Y-SMKR----KDITEIIEFFNEIIELMPASVM-------KRV 90 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEE---EEEEE--E-ECTT----CBGGGHHHHHHHHHHHSCHHHH-------TTE
T ss_pred CCeEEEEEEccccEEEEEEecccCCCcc---EEEEe--e-ecCC----CCHHHHHHHHHHHHHHHhhccc-------ccc
Confidence 357899999999999999999 553 44221 1 1343 3567889988888877654321 246
Q ss_pred eeeeeeeeeeeeeccCCceEEeeeccccccCCCCCC-cHHHHHHHHHHHcCC-CceEEEEEechHHHHhc----------
Q 019310 170 RELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAMERIGL-DMRVAALVNDTIGTLAG---------- 237 (343)
Q Consensus 170 l~lGftFSfPv~q~~i~~g~Li~WtKgF~~~~~~G~-dv~~lL~~al~r~~l-~v~vvaIvNDTvatlla---------- 237 (343)
..+|+.+++|++...+... +..|.. . ++.+++++.+ ++ | |.|.||+.+.+++
T Consensus 91 ~gigi~~pG~vd~g~v~~~-~~~~~~---------~~~l~~~l~~~~---~~~p---v~v~NDa~aaalge~~l~~~~~~ 154 (373)
T 2q2r_A 91 KAGVINVPGPVTGGAVGGP-FNNLKG---------IARLSDYPKALF---PPGH---SAILNDLEAGGFGVLAVSDAHVF 154 (373)
T ss_dssp EEEEEEESSCEETTTEECC-CSSSBS---------CEEGGGSCTTTS---CTTS---EEEEEHHHHHHHHHHHHHHTTCH
T ss_pred cEEEEEeeccccCCEEecc-CCCCCC---------cCCHHHHHHHhc---CCCC---EEEEccHhHHhccccccChhhhc
Confidence 7899999999986111111 335643 3 5665555544 55 6 8999999999999
Q ss_pred -----cccc----------------CCCcEEEEEEccccceeEEcccCcCCCCCCCCCCCCcEEEE
Q 019310 238 -----GRYH----------------NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVIN 282 (343)
Q Consensus 238 -----~~y~----------------~~~~~iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miIN 282 (343)
+.+. +.++.+.+++|||.+++++.+.+.+.+..+..+|.|||.+.
T Consensus 155 ~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~g~l~~G~~~~aGE~Gh~~~~ 220 (373)
T 2q2r_A 155 SEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYNPPMNQHIVVPLELGSQTLP 220 (373)
T ss_dssp HHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEECC---CEEEEEECGGGSBCC
T ss_pred cccchhhcccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEecCcccCCCcccccccceeecC
Confidence 4543 34789999999999999999987766555444566666654
No 27
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=99.35 E-value=1.5e-12 Score=119.76 Aligned_cols=138 Identities=20% Similarity=0.248 Sum_probs=94.8
Q ss_pred ccccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 019310 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (343)
Q Consensus 93 E~G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~l 172 (343)
+.+.+|++|+|||++|+ +++.|+ +. .+.+.|. ..+.+++.+.|++.+ ++. +...+
T Consensus 4 ~~~~~lgiDIGGT~i~~--~d~~g~---~~----~~~~t~~---~~~~~~~~~~i~~~i----~~~---------~i~gi 58 (226)
T 3lm2_A 4 EDQTVLAIDIGGSHVKI--GLSTDG---EE----RKVESGK---TMTGPEMVAAVTAMA----KDM---------TYDVI 58 (226)
T ss_dssp GGCCEEEEEECSSEEEE--EETTTC---CE----EEEECCT---TCCHHHHHHHHHHHT----TTC---------CCSEE
T ss_pred cCCEEEEEEECCCEEEE--EECCCC---EE----EEEECCC---CCCHHHHHHHHHHHH----HhC---------CCCEE
Confidence 35689999999999994 666554 21 2233332 235566666666543 322 24679
Q ss_pred eeeeeeeeeecc-C-CceEE-eeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccccCCCcEEEE
Q 019310 173 GFTFSFPVRQTS-I-ASGDL-IKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAV 249 (343)
Q Consensus 173 GftFSfPv~q~~-i-~~g~L-i~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~~~~~igl 249 (343)
|++++.|++..+ + ...++ ..|.. .++. +.+ ++| |.+.||+.+..+++.+. .+.+.+
T Consensus 59 gi~~pG~Vd~~~~~~~~~nl~~~w~~---------~~l~----~~~---~~p---v~v~NDanaaalge~~~--~~~~~l 117 (226)
T 3lm2_A 59 AMGYPGPVVHNKPLREPVNLGEGWVG---------YDYE----GAF---GRP---VRIVNDALMQAIGSYNG--GRMLFL 117 (226)
T ss_dssp EEEESSCEETTEECSCCTTSCSCCTT---------CCHH----HHH---TSC---EEEEEHHHHHHHHHCCS--SEEEEE
T ss_pred EEEEEeEEECCeEEEECCcCCccccC---------CchH----Hhc---CCe---EEEEEHHHHHHHHHhhc--CcEEEE
Confidence 999999999533 2 22244 25653 5553 344 788 89999999999999876 689999
Q ss_pred EEccccceeEEcccCcCCCCCCCCCCCCcEEEE
Q 019310 250 ILGTGTNAAYVERAHAIPKWHGLLPKSGEMVIN 282 (343)
Q Consensus 250 IlGTGtNa~y~e~~~~I~k~~~~~~e~~~miIN 282 (343)
.+|||.+++++.+.+.++ +|.+||.+.
T Consensus 118 ~~GtGiG~gii~~G~l~~------GEiGH~~v~ 144 (226)
T 3lm2_A 118 GLGTGLGAAMIVENVAQP------MEIAHLPYR 144 (226)
T ss_dssp EESSSEEEEEEETTEEEE------ECCTTSEEE
T ss_pred EeCCceEEEEEECCEEee------eeeeeEEec
Confidence 999999999998876543 466666665
No 28
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=99.32 E-value=9.4e-12 Score=119.13 Aligned_cols=144 Identities=19% Similarity=0.271 Sum_probs=103.3
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecC-CCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCC-Ceeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIP-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPG-RQRELG 173 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip-~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~-~~l~lG 173 (343)
++|+||+|||++|++++++.|+ ++.. ..+| ......+.+++++.|++.|.+++++.+... + +...+|
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~---i~~~----~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~----~~~i~gig 75 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK---ILAE----ADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDP----LVPLRSLG 75 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC---EEEE----EEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCT----TCCBSEEE
T ss_pred EEEEEEcCccceEEEEEeCCCC---EEEE----EeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCCc----ccceeEEE
Confidence 6899999999999999999875 4422 2232 222113578999999999999998875432 3 467899
Q ss_pred eeeeeeeeeccCCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccccCCCcEEEEEEcc
Q 019310 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (343)
Q Consensus 174 ftFSfPv~q~~i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~~~~~iglIlGT 253 (343)
++.++|++.. + +.++.+.|++.+...++| |.|.||+.+.+++ .+ .+..+.+++||
T Consensus 76 i~~pG~vd~~-----------~--------~~~l~~~l~~~~~~~~~p---v~v~NDa~aaa~a-~~--~~~~v~v~~GT 130 (347)
T 2ch5_A 76 LSLSGGDQED-----------A--------GRILIEELRDRFPYLSES---YLITTDAAGSIAT-AT--PDGGVVLISGT 130 (347)
T ss_dssp EEETTTTCHH-----------H--------HHHHHHHHHHHCTTSBSC---EEEEEHHHHHHHH-HC--SSCEEEEEESS
T ss_pred EeccCCCchH-----------H--------HHHHHHHHHHhcCCCCce---EEEECcHHHHHHh-hC--CCCcEEEEEcC
Confidence 9999999853 1 145666666655111256 8999999999999 44 36789999999
Q ss_pred ccceeEEcccCcCCCCCCCCCCCCcEEEEecCCCc
Q 019310 254 GTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF 288 (343)
Q Consensus 254 GtNa~y~e~~~~I~k~~~~~~e~~~miINtEwG~f 288 (343)
|++++++.+ .+..+-.-+||.+
T Consensus 131 Gig~~~v~~-------------~G~~c~cG~~G~l 152 (347)
T 2ch5_A 131 GSNCRLINP-------------DGSESGCGGWGHM 152 (347)
T ss_dssp SEEEEEECT-------------TSCEEEEECCCTT
T ss_pred CceeEEEcC-------------CCCEEecCCcCcc
Confidence 999987752 2344555567765
No 29
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=99.10 E-value=3.5e-10 Score=106.92 Aligned_cols=125 Identities=17% Similarity=0.124 Sum_probs=88.0
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec-CCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCe--eee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI-PPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ--REL 172 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I-p~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~--l~l 172 (343)
++|+||+|||++|+++++++|+ ++.. ... |.... .+.+++++.+++.|.+++++.+... .+. ..+
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~---il~~----~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~~~~~----~~i~~~~i 79 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT---PLAM----AEGGASALS-QGIAKSWQAVLSTLEAAFQQAGLPA----APASACAI 79 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC---EEEE----EEESCCCGG-GCHHHHHHHHHHHHHHHHHHTTCCC----CCGGGEEE
T ss_pred EEEEEEcCccceEEEEEcCCCC---EEEE----EeCCCCCcc-cCHHHHHHHHHHHHHHHHHhcCCCh----hhhccceE
Confidence 6899999999999999999775 4422 122 22222 4578899999999999998765432 233 578
Q ss_pred eeeeeeeeeeccCCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccccCCCcEEEEEEc
Q 019310 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILG 252 (343)
Q Consensus 173 GftFSfPv~q~~i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~~~~~iglIlG 252 (343)
|++.+.|++... |. + |++.+.+ ++| +.|.||+.+.++++. . .+..+.+++|
T Consensus 80 gig~pG~v~~~~--------~~-----------~----l~~~~~~-~~p---v~v~NDa~aaa~ge~-~-~~~~v~v~~G 130 (305)
T 1zc6_A 80 GLGLSGVHNRQW--------AG-----------E----FESQAPG-FAR---LSLATDGYTTLLGAH-G-GQPGIIVALG 130 (305)
T ss_dssp EEEESCCCTTSH--------HH-----------H----HHHTCCC-CSE---EEEECHHHHHHHHHT-T-TSSEEEEEES
T ss_pred EEEecCCCchHH--------HH-----------H----HHHhCCC-Cce---EEEECCHHHHHHhhc-C-CCCeEEEEec
Confidence 999999987532 32 0 3332210 344 899999999999973 3 4678899999
Q ss_pred cccceeEEc
Q 019310 253 TGTNAAYVE 261 (343)
Q Consensus 253 TGtNa~y~e 261 (343)
||++++.+.
T Consensus 131 TGigg~~i~ 139 (305)
T 1zc6_A 131 TGSIGEALY 139 (305)
T ss_dssp SSEEEEEEC
T ss_pred CCeEEEEEe
Confidence 999755554
No 30
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=99.09 E-value=3.4e-10 Score=106.55 Aligned_cols=127 Identities=14% Similarity=0.110 Sum_probs=86.1
Q ss_pred EEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCC-CcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 019310 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (343)
Q Consensus 97 fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~-~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGft 175 (343)
+|+||+|||++|+++++ +|+ ++.. ...|. .....+.+++++.|.+.|.+.+. ... .+...+|++
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~---il~~----~~~~~~~~~~~~~~~~~~~i~~~i~~~~~---~~~----~~i~~igig 66 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGK---SLGR----FQTSGINPFQQDRNEIDTALRSEVLPAIG---QKA----SSIRAVYFY 66 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTE---EEEE----EEEECCCTTTSCHHHHHHHHTTTTHHHHT---TST----TTCCEEEEE
T ss_pred EEEEEeCccceEEEEEe-CCe---EEEE----EECCCCCcccCCHHHHHHHHHHHHHHHhC---CCc----ccccEEEEE
Confidence 79999999999999999 764 4422 23322 22223678899999888887642 111 234578888
Q ss_pred eeeeeeeccCCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccccCCCcEEEEEEcccc
Q 019310 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (343)
Q Consensus 176 FSfPv~q~~i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~~~~~iglIlGTGt 255 (343)
.+.++ .. .+ .++.+.|++.+ +. -..+.|.||+.++++++. +.+..+.+|+|||+
T Consensus 67 ~pG~~-~~---~~----------------~~l~~~l~~~~---~~-~~pv~v~NDa~~aa~ge~--g~~~~v~v~~GTGi 120 (291)
T 1zbs_A 67 GAGCT-PA---KA----------------PMLNEALDSML---PH-CDRIEVAGDMLGAARALC--GDSEGIACILGTGS 120 (291)
T ss_dssp ETTCC-TT---TH----------------HHHHHHHHHHS---TT-CSEEEEECHHHHHHHHHT--TTSCEEEEEESSSE
T ss_pred CCCCC-hH---HH----------------HHHHHHHHHhc---CC-CCcEEEeCcHHHHHHhhc--CCCCcEEEEecCCh
Confidence 88876 21 11 25666666655 42 023899999999999984 56788999999999
Q ss_pred ceeEE-cccC
Q 019310 256 NAAYV-ERAH 264 (343)
Q Consensus 256 Na~y~-e~~~ 264 (343)
+++.+ .+.+
T Consensus 121 gg~~i~~~G~ 130 (291)
T 1zbs_A 121 NSCLFDGREI 130 (291)
T ss_dssp EEEEECSSSE
T ss_pred heEEECCCCc
Confidence 85554 4543
No 31
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=99.08 E-value=3.6e-11 Score=117.96 Aligned_cols=167 Identities=14% Similarity=0.144 Sum_probs=106.5
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHH---HHHHHHHHHhcCCCCCCCCCCeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYI---AAALAKFVATEGEGFHVSPGRQREL 172 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~I---A~~I~~fl~~~~~~~~~~~~~~l~l 172 (343)
.+|+||+|||++|++++++. .++.. .+++.|..-. .+.+++++.+ .+.|.+++++.+... .+...+
T Consensus 3 ~vlgidiGgt~ik~al~d~~----~il~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~~~~~----~~i~gI 71 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE----RMVKM--QNFSHSPDEL-GRFQKILDQLEFREKIARQFVEETGYSL----SSFSAF 71 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT----EEEEE--EEEECCHHHH-HTCSSGGGGHHHHHHHHHHHHHTTTCCG----GGCSEE
T ss_pred eEEEEECCccceeEEEEecc----hheee--eecccCcccc-cchhhHHHHHHHHHHHHHHHHHHcCCCc----cCceEE
Confidence 47999999999999999863 24432 2333332100 0233455566 888888887665321 245667
Q ss_pred eeeeeeeee-eccCCc----eE---EeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechH---------HHH
Q 019310 173 GFTFSFPVR-QTSIAS----GD---LIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTI---------GTL 235 (343)
Q Consensus 173 GftFSfPv~-q~~i~~----g~---Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTv---------atl 235 (343)
+.+++|++ .++.-. .. |..+.+ +..+.-.+.++.+.|++.+ ++| +.|.||+. +..
T Consensus 72 -i~~pG~vd~~~G~~~~i~~~~~~~l~~~~~-~~~~~nl~~~l~~~l~~~~---~~P---v~v~NDan~~~~~~~a~aaa 143 (381)
T 1saz_A 72 -VSRGGLLDPIPGGVYLVDGLMIKTLKSGKN-GEHASNLGAIIAHRFSSET---GVP---AYVVDPVVVDEMEDVARVSG 143 (381)
T ss_dssp -EEECCSCSCBCSSEEECCHHHHHHHHHTTT-CCCTTHHHHHHHHHHHHHH---CCC---EEEESCTTBCCCCGGGTBCS
T ss_pred -EecCCCCCCCCCceEecCHHHHHHHHhccc-ccChhhhhHHHHHHHHHhc---CCC---EEEeCCCccccCcHHHHHcC
Confidence 88889998 333110 00 000000 0001111345666777776 888 67999999 887
Q ss_pred h-----------------cc-cc----cCCC--cEEEEEEccccceeEEcccCcCCCCCCCCCCCCcEEEE
Q 019310 236 A-----------------GG-RY----HNKD--AIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVIN 282 (343)
Q Consensus 236 l-----------------a~-~y----~~~~--~~iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miIN 282 (343)
+ ++ .+ ++.+ +.+.+.+|||+++|.+.+++.+.+..+..+| |||.++
T Consensus 144 lp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG~g~i~~G~~~~G~~g~agE-Gh~~~~ 213 (381)
T 1saz_A 144 HPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRKGRVIDVNNALDGD-GPFTPE 213 (381)
T ss_dssp STTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEEEEEEETTEEEEECCGGGTC-SSCCSS
T ss_pred CcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcEEEEEECCEEEEecCCCCCC-cceeec
Confidence 7 77 43 2335 8999999999999999999888776665667 998875
No 32
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=99.07 E-value=1.1e-10 Score=109.82 Aligned_cols=122 Identities=20% Similarity=0.192 Sum_probs=75.4
Q ss_pred EEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCC-CcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 019310 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (343)
Q Consensus 97 fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~-~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGft 175 (343)
||+||+|||++|+++++ +|+ ++.. ...|. +....+.+++++.|.+.|.+.+.. .+...+|+.
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g~---il~~----~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~---------~~i~~igig 64 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGA---VIKR----LGTKGINPFFQSEEEIQQKLTASLLPQLPE---------GKFNAVYFY 64 (291)
T ss_dssp --CEECCTTCEEEEEEC-SSS---EEEE----EEECCCCTTTSCSTTTTTTTTC----------------------CEEE
T ss_pred EEEEEeccccEEEEEEc-CCe---EEEE----EECCCCCcccCCHHHHHHHHHHHHHHhcCc---------ccccEEEEE
Confidence 78999999999999998 765 4422 22333 222224567777777777665421 134568888
Q ss_pred eeeeeeeccCCceEEeeeccccccCCCCCCcHHHHHHHHHHHcC--CCceEEEEEechHHHHhcccccCCCcEEEEEEcc
Q 019310 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG--LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (343)
Q Consensus 176 FSfPv~q~~i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~--l~v~vvaIvNDTvatlla~~y~~~~~~iglIlGT 253 (343)
.+.+. .. . +.++.+.|++.+ + .| +.|.||++++++++. +.+..+.+|+||
T Consensus 65 ~pG~~-~~---~----------------~~~l~~~l~~~~---~~~~p---v~v~NDa~~aalge~--g~~~~v~v~~GT 116 (291)
T 1zxo_A 65 GAGCT-PE---K----------------APVLRRAIADSL---PVIGN---IKANSDMLAAAHGLC--GQKAGIACILGT 116 (291)
T ss_dssp CTTCC-TT---T----------------THHHHHHHHHHS---CCCSC---CEEECSHHHHHHHTT--TTSCBEEEEESS
T ss_pred cCCCC-HH---H----------------HHHHHHHHHHhc---CCCce---EEEECcHHHHHHhhc--CCCCcEEEEeCC
Confidence 88876 21 1 125666666655 5 35 899999999999985 567789999999
Q ss_pred ccc-eeEEccc
Q 019310 254 GTN-AAYVERA 263 (343)
Q Consensus 254 GtN-a~y~e~~ 263 (343)
|++ ++++.+.
T Consensus 117 Gi~g~gi~~~G 127 (291)
T 1zxo_A 117 GSNSCFYNGKE 127 (291)
T ss_dssp SEEEEEECSSS
T ss_pred ChheEEECCCC
Confidence 996 5565554
No 33
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=99.07 E-value=6.5e-11 Score=111.26 Aligned_cols=116 Identities=15% Similarity=0.144 Sum_probs=82.9
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGft 175 (343)
++|+||+|||++|+++++++|+ ++.. .+++.|. ....+.+++++.|.+.|.+++++. ...+|++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~---i~~~--~~~~~~~-~~~~~~~~~~~~i~~~i~~~~~~~----------~~~igi~ 66 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGN---FIGE--GSSGPGN-YHNVGLTRAIENIKEAVKIAAKGE----------ADVVGMG 66 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSC---EEEE--EEESCCC-HHHHCHHHHHHHHHHHHHHHHTSC----------CSEEEEE
T ss_pred EEEEEEeCCCcEEEEEEcCCCC---EEEE--EeCCCCC-cccCCHHHHHHHHHHHHHHHHhcC----------CCEEEEE
Confidence 4799999999999999999775 4422 2233322 111357889999999999987532 2468999
Q ss_pred eeeeeeeccCCceEEeeeccccccCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHHhcccccCCCcEEEEEEcccc
Q 019310 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (343)
Q Consensus 176 FSfPv~q~~i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~~~~~iglIlGTGt 255 (343)
+++| +... +. .++.+.|++ + ++| +.+.||+.+.++++.+ .++.+.+++|||.
T Consensus 67 ~~G~-~~~~---~~---------------~~l~~~l~~-~---~~p---v~v~ND~~aaa~~e~~--~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 67 VAGL-DSKF---DW---------------ENFTPLASL-I---APK---VIIQHDGVIALFAETL--GEPGVVVIAGTGS 118 (299)
T ss_dssp ETTC-CSHH---HH---------------HHHHHHHTT-S---SSE---EEEEEHHHHHHHHHHT--TSCEEEEEESSSE
T ss_pred cCCC-Cchh---HH---------------HHHHHHHHh-C---CCC---EEEeCcHHHHHhhccC--CCCeEEEEecCCE
Confidence 9999 6321 10 245555554 4 455 8899999999999876 5678999999994
No 34
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=97.69 E-value=9.3e-05 Score=74.87 Aligned_cols=96 Identities=21% Similarity=0.232 Sum_probs=65.1
Q ss_pred cccccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--CC-CcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 019310 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGR 168 (343)
Q Consensus 92 ~E~G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p~-~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~ 168 (343)
.+..++|+||+|+|++|+++++.+|+ ++...+..++. |. .....+.+++++.+.++|++.+++.+... .+
T Consensus 4 ~~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~----~~ 76 (508)
T 3ifr_A 4 AQGRQVIGLDIGTTSTIAILVRLPDT---VVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESD----WR 76 (508)
T ss_dssp ---CEEEEEEECSSEEEEEEEETTTE---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGG----CC
T ss_pred ccCCEEEEEEecCcceEEEEECCCCC---EEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCCh----hh
Confidence 33457999999999999999997765 55443333332 11 11234688999999999999998765432 46
Q ss_pred eeeeeeeeee----eeeecc--CCceEEeeeccc
Q 019310 169 QRELGFTFSF----PVRQTS--IASGDLIKWTKG 196 (343)
Q Consensus 169 ~l~lGftFSf----Pv~q~~--i~~g~Li~WtKg 196 (343)
+..||++-.. |+|..+ +.. .+.|...
T Consensus 77 I~~Igis~~~~~~v~~D~~G~~l~~--~i~W~D~ 108 (508)
T 3ifr_A 77 PGGICVTGMLPAVVLLDDRGAVLRP--SIQQSDG 108 (508)
T ss_dssp EEEEEEEECSSCBEEECTTSCBCSC--EECTTCC
T ss_pred eEEEEEECCCCcEEEECCCCCCccc--ceecccc
Confidence 7788888887 888655 333 3457653
No 35
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=97.55 E-value=0.00023 Score=71.96 Aligned_cols=94 Identities=19% Similarity=0.254 Sum_probs=64.0
Q ss_pred ccccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--CCC-cccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCe
Q 019310 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (343)
Q Consensus 93 E~G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p~~-~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~ 169 (343)
|..++|+||+|+|++|+++++.+|+ ++...+..++. |+. ....+.+++++.+.++|++.+++.+... .++
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~----~~I 73 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISS----DQI 73 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG----GGE
T ss_pred CCcEEEEEEcCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCCh----hhe
Confidence 4568999999999999999998775 55443333321 211 1224688999999999999998765432 356
Q ss_pred eeeeeeeee----eeeec-c--CCceEEeeecc
Q 019310 170 RELGFTFSF----PVRQT-S--IASGDLIKWTK 195 (343)
Q Consensus 170 l~lGftFSf----Pv~q~-~--i~~g~Li~WtK 195 (343)
..||++-.. |+|.. + +..+ +.|..
T Consensus 74 ~~Igis~~~~~~v~~D~~~G~~l~~~--i~W~D 104 (510)
T 2p3r_A 74 AAIGITNQRETTIVWEKETGKPIYNA--IVWQC 104 (510)
T ss_dssp EEEEEEECSSCBEEEETTTCCBSSCE--ECTTC
T ss_pred EEEEEeCCcCcEEEEECCCCeECccc--ccccC
Confidence 777777663 78854 5 3333 45754
No 36
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=97.54 E-value=0.00022 Score=72.43 Aligned_cols=92 Identities=17% Similarity=0.291 Sum_probs=63.9
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEee--cCCC-cccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeee
Q 019310 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS--IPPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (343)
Q Consensus 95 G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~--Ip~~-~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~ 171 (343)
.++|+||+|+|++|+++++.+|+ ++...+..++ .|+. ....+.+++++.+.++|++.+++.+... .++..
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~----~~I~~ 98 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGNQK---IAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITA----NDIAA 98 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCG----GGEEE
T ss_pred CeEEEEEeCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEE
Confidence 46899999999999999998775 5544333332 1221 1234688999999999999998765432 35778
Q ss_pred eeeeeee----eee-ecc--CCceEEeeecc
Q 019310 172 LGFTFSF----PVR-QTS--IASGDLIKWTK 195 (343)
Q Consensus 172 lGftFSf----Pv~-q~~--i~~g~Li~WtK 195 (343)
||++-.. |+| +++ +.. .+.|..
T Consensus 99 Igis~~g~~~v~~D~~~G~~l~~--~i~W~D 127 (520)
T 4e1j_A 99 IGITNQRETVVVWDRETGKPIHN--AIVWQD 127 (520)
T ss_dssp EEEEECSSCEEEEETTTCCBSSC--EECTTC
T ss_pred EEEeCCcceEEEEECCCCeECcc--cccccc
Confidence 8888776 888 566 333 335754
No 37
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=97.42 E-value=0.00041 Score=69.91 Aligned_cols=93 Identities=14% Similarity=0.224 Sum_probs=61.7
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--CC-CcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p~-~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~l 172 (343)
++|+||+|+|++|+++++.+|+ ++...+..++. |. .....+.+++++.+.++|++.+++.+... .++..|
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~----~~I~~I 79 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKGE---IAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRA----DQIAGI 79 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCG----GGEEEE
T ss_pred EEEEEEeCccceEEEEEcCCCC---EEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEEE
Confidence 6899999999999999998775 55443333321 21 11234678999999999999998765432 356667
Q ss_pred eeeee----eeeeec-cCCceEEeeecc
Q 019310 173 GFTFS----FPVRQT-SIASGDLIKWTK 195 (343)
Q Consensus 173 GftFS----fPv~q~-~i~~g~Li~WtK 195 (343)
|++-. .|+|.. +.--...+.|..
T Consensus 80 gis~~~~~~v~~D~~~G~~l~~~i~w~D 107 (501)
T 3g25_A 80 GITNQRETTVVWDKHTGRPIYHAIVWQS 107 (501)
T ss_dssp EEEECSSCEEEEETTTCCBSSCEECTTC
T ss_pred EEECCcCcEEEEECCCCeECCCceeecc
Confidence 77654 688854 522222235754
No 38
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=97.40 E-value=0.00046 Score=69.35 Aligned_cols=92 Identities=22% Similarity=0.289 Sum_probs=62.1
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--CCC-cccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p~~-~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~l 172 (343)
.+|+||+|||++|+++++.+|+ ++...+..++. |.. ....+.+++++.+.++|++.+++.+... .+...|
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~----~~i~~I 75 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGR---PVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEA----GEVLAL 75 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG----GGCCEE
T ss_pred EEEEEeeCCcceEEEEECCCCC---EEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCc----ccEEEE
Confidence 5899999999999999998765 44433333321 211 1224678999999999999998765432 356778
Q ss_pred eeeee----eeeeec-c-CCceEEeeecc
Q 019310 173 GFTFS----FPVRQT-S-IASGDLIKWTK 195 (343)
Q Consensus 173 GftFS----fPv~q~-~-i~~g~Li~WtK 195 (343)
|++.. .|+|.. + +-...+ .|..
T Consensus 76 gis~~~~~~~~vD~~~G~~l~~~i-~w~D 103 (495)
T 2dpn_A 76 GITNQRETTLLWDRKTGKPLHNAI-VWQD 103 (495)
T ss_dssp EEEECSSCBEEEETTTCCBSSCEE-CTTC
T ss_pred EEeCCCccEEEEECCCCcCCccce-eecc
Confidence 88888 588854 5 222333 5853
No 39
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=97.40 E-value=0.00061 Score=68.75 Aligned_cols=95 Identities=18% Similarity=0.268 Sum_probs=62.2
Q ss_pred cccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--CC-CcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCee
Q 019310 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (343)
Q Consensus 94 ~G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p~-~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l 170 (343)
..++|+||+|+|++|+++++.+|+ ++...+..++. |. .....+.+++++.+.++|++.+++.+... .++.
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~----~~I~ 76 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRP----EAIA 76 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GGEE
T ss_pred CCEEEEEEcCCCceEEEEECCCCC---EEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCCh----hheE
Confidence 347999999999999999998776 55443333321 21 12234688999999999999998765432 3556
Q ss_pred eeeeeee----eeeeec-cCCceEEeeecc
Q 019310 171 ELGFTFS----FPVRQT-SIASGDLIKWTK 195 (343)
Q Consensus 171 ~lGftFS----fPv~q~-~i~~g~Li~WtK 195 (343)
.||++-. .++|.. +.--...+.|..
T Consensus 77 ~Igis~~~~~~v~~D~~~G~~l~~~i~w~D 106 (506)
T 3h3n_X 77 GIGITNQRETTVVWDKTTGQPIANAIVWQS 106 (506)
T ss_dssp EEEEEECSSCBEEEETTTCCBSSCEECTTC
T ss_pred EEEeeCCcccEEEEeCCCCeECCCceEecC
Confidence 6666653 378854 522222345764
No 40
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=97.36 E-value=0.00058 Score=68.75 Aligned_cols=91 Identities=8% Similarity=0.004 Sum_probs=61.1
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--CCC-cccCCchHHHHHHHHHHHHHHHhc--CCCCCCCCCCee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATE--GEGFHVSPGRQR 170 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p~~-~~~~~~~~lFd~IA~~I~~fl~~~--~~~~~~~~~~~l 170 (343)
.+|+||+|||++|+++++.+|+ ++...+..++. |.. ....+.+++++.+.++|.+.+++. +... .+..
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~----~~i~ 77 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELN---IVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYTS----VIIK 77 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSSS----CEEE
T ss_pred EEEEEEeCCcceEEEEECCCCC---EEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCCc----cceE
Confidence 5899999999999999998775 55443333321 111 112467899999999999998874 3321 3567
Q ss_pred eeeeeee----eeeeec-c-CCceEEeeec
Q 019310 171 ELGFTFS----FPVRQT-S-IASGDLIKWT 194 (343)
Q Consensus 171 ~lGftFS----fPv~q~-~-i~~g~Li~Wt 194 (343)
.||++.. .|+|.. + +-...+ .|.
T Consensus 78 ~Igis~~~~~~~~~D~~~G~~l~~~i-~w~ 106 (503)
T 2w40_A 78 CIGITNQRETVIIWDRITGKPLYNAI-VWL 106 (503)
T ss_dssp EEEEEECSSCEEEEETTTCCBSSCEE-CTT
T ss_pred EEEEcCCcceEEEEECCCCcCCccce-eec
Confidence 8888887 588854 5 222333 574
No 41
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=97.31 E-value=0.00064 Score=68.53 Aligned_cols=91 Identities=13% Similarity=0.184 Sum_probs=61.6
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--CCC-cccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p~~-~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~l 172 (343)
.+|+||+|+|++|+++++.+|+ ++...+..++. |.. ....+.+++++.+.++|.+.+++.+... .+...|
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~----~~i~~I 75 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE---IYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTH----EDIAAV 75 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG----GGEEEE
T ss_pred EEEEEecCCcceEEEEECCCCC---EEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCc----ccEEEE
Confidence 5899999999999999998775 55443333321 111 1123678999999999999998765432 356788
Q ss_pred eeeeee----eeeec-c-CCceEEeeec
Q 019310 173 GFTFSF----PVRQT-S-IASGDLIKWT 194 (343)
Q Consensus 173 GftFSf----Pv~q~-~-i~~g~Li~Wt 194 (343)
|++... |+|.. + +-...+ .|.
T Consensus 76 gis~~g~~~v~vD~~~G~~l~~~i-~w~ 102 (504)
T 2d4w_A 76 GITNQRETAVVWDKTTGKPVYNAI-VWQ 102 (504)
T ss_dssp EEEECSSCBEEEETTTCCBSSCEE-CTT
T ss_pred EEeCCCCeEEEEECCCCCCccccc-eec
Confidence 888886 88854 5 222333 574
No 42
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=97.27 E-value=0.0007 Score=68.08 Aligned_cols=82 Identities=15% Similarity=0.128 Sum_probs=57.5
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--CCC-cccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p~~-~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~l 172 (343)
.+|+||+|||++|+++++.+|+ ++...+..++. |.. ....+.+++++.+.++|++.+++.+... .+...|
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~---~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~----~~i~~I 76 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESN---IHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEP----NQIAAI 76 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GGEEEE
T ss_pred EEEEEecCCchhEEEEECCCCC---EEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEEE
Confidence 6899999999999999988665 55443333321 211 1123678999999999999998765432 356677
Q ss_pred eeeeee----eeeecc
Q 019310 173 GFTFSF----PVRQTS 184 (343)
Q Consensus 173 GftFSf----Pv~q~~ 184 (343)
|++... ++|.++
T Consensus 77 gis~~~~~~v~~D~~G 92 (497)
T 2zf5_O 77 GVTNQRETTLVWDKDG 92 (497)
T ss_dssp EEEECSSCEEEECTTC
T ss_pred EEecCCCcEEEECCCC
Confidence 777775 778655
No 43
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=97.25 E-value=0.00084 Score=67.22 Aligned_cols=80 Identities=15% Similarity=0.293 Sum_probs=56.5
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--CCC-cccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p~~-~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~l 172 (343)
.||+||+|||++|+++++.+|+ ++...+..+++ |+. ....+.+++++.+.++|++.+++... ++...|
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~---~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~------~~i~~I 71 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGE---VVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSL------QDVKAL 71 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSCC------TTCCEE
T ss_pred CEEEEEecCcccEEEEECCCCC---EEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCCc------cceEEE
Confidence 3799999999999999988765 55443333321 211 12246789999999999999876421 356778
Q ss_pred eeeeee----eeeecc
Q 019310 173 GFTFSF----PVRQTS 184 (343)
Q Consensus 173 GftFSf----Pv~q~~ 184 (343)
|++... ++|..+
T Consensus 72 gis~~~~~~v~~D~~G 87 (484)
T 2itm_A 72 GIAGQMHGATLLDAQQ 87 (484)
T ss_dssp EEEECSSCBEEECTTC
T ss_pred EEcCCcCcEEEECCCc
Confidence 888887 888655
No 44
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=97.21 E-value=0.0008 Score=68.23 Aligned_cols=86 Identities=19% Similarity=0.242 Sum_probs=59.0
Q ss_pred cccccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--CC-CcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 019310 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGR 168 (343)
Q Consensus 92 ~E~G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p~-~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~ 168 (343)
+|+-+|||||+|.|+.|+++++.+|+ ++...+..++. |+ .....+++++++-+.++|++.+++.+... ++
T Consensus 1 tekkYvlgID~GTss~Ka~l~d~~G~---~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~----~~ 73 (526)
T 3ezw_A 1 TEKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISS----DQ 73 (526)
T ss_dssp --CCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GG
T ss_pred CCceEEEEEEccccceeeeEEcCCCC---EEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCCh----hh
Confidence 47888999999999999999988775 55444334332 21 11224688999999999999999876543 46
Q ss_pred eeeeeeee----eeeee-ecc
Q 019310 169 QRELGFTF----SFPVR-QTS 184 (343)
Q Consensus 169 ~l~lGftF----SfPv~-q~~ 184 (343)
+..||++- ..++| +++
T Consensus 74 I~aIgis~q~~~~v~~D~~~G 94 (526)
T 3ezw_A 74 IAAIGITNQRETTIVWEKETG 94 (526)
T ss_dssp EEEEEEEECSSCBEEEETTTC
T ss_pred EEEEEEeCCCCCEEEEECCCC
Confidence 67777753 24666 444
No 45
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=97.02 E-value=0.0017 Score=65.59 Aligned_cols=92 Identities=11% Similarity=0.147 Sum_probs=59.4
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--CC-CcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p~-~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~l 172 (343)
++|+||+|+|++|+++++.+|+ ++...+..+++ |. .....+.+++++.+.++|++.+ +.+... .++..|
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~----~~I~~I 77 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDGG---LHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDA----RRVSAI 77 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCG----GGEEEE
T ss_pred EEEEEEeCCCceEEEEECCCCC---EEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCCh----hHeEEE
Confidence 6899999999999999998765 55444333332 21 1223468899999999999998 544322 356666
Q ss_pred eeeee----eeeeeccCCceEEeeecc
Q 019310 173 GFTFS----FPVRQTSIASGDLIKWTK 195 (343)
Q Consensus 173 GftFS----fPv~q~~i~~g~Li~WtK 195 (343)
|++-- -++|..+-.-...+.|..
T Consensus 78 gis~q~~~~v~~D~~G~pl~~~i~W~D 104 (511)
T 3hz6_A 78 VLSGQMQNFLPLDQDHEPLHRAVLYSD 104 (511)
T ss_dssp EEEECCSCBEEECTTSCBSSCEECTTC
T ss_pred EEecccccEEEECCCcCCCcCceecCC
Confidence 66643 277765522223345654
No 46
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.99 E-value=0.0016 Score=66.51 Aligned_cols=74 Identities=24% Similarity=0.388 Sum_probs=51.7
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--C-CCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeee
Q 019310 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (343)
Q Consensus 95 G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p-~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~ 171 (343)
.++|+||+|+|++|+++++.+|+ ++...+..+++ | ......+.+++++.+.++|++.+++.+... .++..
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~G~---il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~----~~I~~ 77 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDLQGR---MVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINP----IQVKG 77 (554)
T ss_dssp CEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCG----GGEEE
T ss_pred cEEEEEEECcccEEEEEECCCCC---EEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCH----hHEEE
Confidence 47899999999999999998775 55443333321 1 112235689999999999999998765432 35566
Q ss_pred eeee
Q 019310 172 LGFT 175 (343)
Q Consensus 172 lGft 175 (343)
||++
T Consensus 78 Igis 81 (554)
T 3l0q_A 78 LGFD 81 (554)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6664
No 47
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.82 E-value=0.0025 Score=65.28 Aligned_cols=83 Identities=13% Similarity=0.288 Sum_probs=55.4
Q ss_pred ccEEEEeeCCceEEEEEEEe-CCCcceeEEEeeEEee-------cC-------CCcccCCchHHHHHHHHHHHHHHHhcC
Q 019310 95 GLFYALDLGGTNFRVLRVQL-GGREGRVVKQEFEEVS-------IP-------PHLMTGSSHELFDYIAAALAKFVATEG 159 (343)
Q Consensus 95 G~fLaIDlGGTNlRv~lV~l-~g~~~~i~~~~~~~~~-------Ip-------~~~~~~~~~~lFd~IA~~I~~fl~~~~ 159 (343)
.++|+||+|+|++|+++++. +|+ ++...+..++ .| ......+.+++++.+.++|++.+++.+
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~~~G~---i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~ 81 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDLSNGQ---ELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESG 81 (572)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCC---EEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC--
T ss_pred CEEEEEecCCcceEEEEEECCCCe---EEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 37999999999999999998 776 5554444443 12 122234678999999999999998765
Q ss_pred CCCCCCCCCeeeeeeeee----eeeeecc
Q 019310 160 EGFHVSPGRQRELGFTFS----FPVRQTS 184 (343)
Q Consensus 160 ~~~~~~~~~~l~lGftFS----fPv~q~~ 184 (343)
... .++..||++.- -++|..+
T Consensus 82 ~~~----~~I~~Igis~q~~~~v~~D~~G 106 (572)
T 3jvp_A 82 VDA----DDVIGIGVDFTACTMLPVDEEG 106 (572)
T ss_dssp -CC----SCEEEEEEEECSSCEEEECTTS
T ss_pred CCh----hHEEEEEEecCCCcEEEECCCC
Confidence 432 35666666653 2666544
No 48
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.77 E-value=0.0045 Score=62.36 Aligned_cols=90 Identities=11% Similarity=0.232 Sum_probs=58.8
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec--CC-CcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I--p~-~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~l 172 (343)
++|+||+|+|++|+++++.+|+ ++...+..++. |+ .....+.+++++.+.++|++.+++.+ .++..|
T Consensus 5 ~~lgIDiGtts~K~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~-------~~I~~I 74 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDINGK---AVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID-------GKIAAI 74 (504)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS-------SEEEEE
T ss_pred EEEEEEecCCceEEEEEcCCCC---EEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC-------CCeEEE
Confidence 6899999999999999998775 55444333332 21 12234688999999999999987653 145566
Q ss_pred eeeee----eeeeeccCCceEEeeecc
Q 019310 173 GFTFS----FPVRQTSIASGDLIKWTK 195 (343)
Q Consensus 173 GftFS----fPv~q~~i~~g~Li~WtK 195 (343)
|++-- -++|..+-.-...+.|..
T Consensus 75 gis~q~~~~v~~D~~G~pl~~~i~W~D 101 (504)
T 3ll3_A 75 SWSSQMHSLIGLGSDDELLTNSITWAD 101 (504)
T ss_dssp EEEECSSCBEEECTTSCBSSCEECTTC
T ss_pred EEECCCCcEEEECCCCCCcccceeCCc
Confidence 66543 367765522223345654
No 49
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=96.26 E-value=0.013 Score=58.51 Aligned_cols=80 Identities=20% Similarity=0.121 Sum_probs=52.4
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEE-----eecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEE-----VSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~-----~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l 170 (343)
.||+||+|+|++|+++++.+|+.-......... .+-|... ..+.+++++.|.+++++..... .++.
T Consensus 5 ~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~-e~d~~~~~~~i~~~~~~~~~~~--------~~i~ 75 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYV-TWDVDSLESAIRLGLNKVCAAG--------IAID 75 (489)
T ss_dssp EEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEE-ECCHHHHHHHHHHHHHHHHHTT--------CCCC
T ss_pred eEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeE-EECHHHHHHHHHHHHHHHHhCC--------CCce
Confidence 589999999999999999876522111111011 1111111 2357789999999998876521 2467
Q ss_pred eeeeee----eeeeeecc
Q 019310 171 ELGFTF----SFPVRQTS 184 (343)
Q Consensus 171 ~lGftF----SfPv~q~~ 184 (343)
.||++. ..++|..+
T Consensus 76 ~Igis~q~~~~v~~D~~G 93 (489)
T 2uyt_A 76 SIGIDTWGVDFVLLDQQG 93 (489)
T ss_dssp EEEEEECSSCEEEECTTS
T ss_pred EEEEecCcccEEEECCCC
Confidence 889988 88898655
No 50
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=96.23 E-value=0.0077 Score=55.50 Aligned_cols=180 Identities=14% Similarity=0.138 Sum_probs=95.1
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGft 175 (343)
-+|+||+|+||+++++++ +++ +. ..|++|+... .+.+++..++.+.+.. .. .+.. |+.
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~~---l~----~~~r~~T~~~-~t~de~~~~l~~l~~~----~~-------~~i~--~i~ 61 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DGK---TF----RRWRLSTGVF-QTEDELFSHLHPLLGD----AM-------REIK--GIG 61 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SSS---SC----EEEEEECCTT-CCHHHHHHHHHHHHGG----GG-------GGEE--EEE
T ss_pred eEEEEEECCCeEEEEEEE-CCE---EE----EEEEecCCCC-CCHHHHHHHHHHHHhh----cc-------ccCC--EEE
Confidence 479999999999999996 222 33 3566776543 5677887776654432 10 0112 223
Q ss_pred eeeeeeeccCCceEEeeeccccccCCCCCCcHHHHHHHHHHHc-CCCceE---------EEEEe------chHHHHhccc
Q 019310 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRV---------AALVN------DTIGTLAGGR 239 (343)
Q Consensus 176 FSfPv~q~~i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~-~l~v~v---------vaIvN------DTvatlla~~ 239 (343)
.|=++ -.+...+++.+++. +++..+ +...| |-.+.+++..
T Consensus 62 IsSVv------------------------p~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~ 117 (249)
T 3bex_A 62 VASVV------------------------PTQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFV 117 (249)
T ss_dssp EEESC------------------------HHHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHH
T ss_pred EEcCc------------------------HHHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHH
Confidence 33222 12333444444332 322111 22334 6666777765
Q ss_pred ccCCCcEEEEEEccccceeEEcccCcCCCCCCCCCCCCcEEEEecCCCc--CCCCCCCChhhHhHhccCCCCCcccceee
Q 019310 240 YHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF--RSSHLPLTEYDEALDTESLNPGEQVAILM 317 (343)
Q Consensus 240 y~~~~~~iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miINtEwG~f--~~~~lp~T~~D~~lD~~s~nPG~q~fEKm 317 (343)
.......+-+-+||.+..+++.++.-+.++=. |. +++=.-++ +...||.-+.+ .....+|...-|-|
T Consensus 118 ~~~~~~~iVvD~GTA~T~d~v~~g~~lGG~I~--PG-----i~l~~~aL~~~ta~Lp~v~~~----~~~~~~g~nT~~ai 186 (249)
T 3bex_A 118 KEYGKNGIIIDMGTATTVDLVVNGSYEGGAIL--PG-----FFMMVHSLFRGTAKLPLVEVK----PADFVVGKDTEENI 186 (249)
T ss_dssp HHTCSCEEEEEESSEEEEEEEETTEEEEEEEE--EC-----HHHHHHHHHHTCSSCCCCCCC----CCCSSSBSSHHHHH
T ss_pred HHcCCCEEEEEcCCceEEEEEeCCeEeeEEEC--cc-----HHHHHHHHHHhhhcCCCCccc----CCCCCCCCCHHHHH
Confidence 55567789999999999999944322211100 00 00000000 11235544322 22345688888999
Q ss_pred cccch--hHHhhhhhcc
Q 019310 318 CQFHV--TIAYIDSFID 332 (343)
Q Consensus 318 iSG~~--~~~~~~~~~~ 332 (343)
-||.+ ....+|.+++
T Consensus 187 ~sGi~~g~~g~i~~~i~ 203 (249)
T 3bex_A 187 RLGVVNGSVYALEGIIG 203 (249)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99984 4555665554
No 51
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=95.88 E-value=0.013 Score=58.87 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=40.2
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeec-C-CCcccCCchHHHHHHHHHHHHHH
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI-P-PHLMTGSSHELFDYIAAALAKFV 155 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~I-p-~~~~~~~~~~lFd~IA~~I~~fl 155 (343)
+||+||+|+|+.|+++++.+|+ ++...+..+++ | ......+.+++++.+.++|++.+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G~---i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDGR---MLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTSC---EEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCeEEEEEECCCc---EEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH
Confidence 6899999999999999986665 55443333332 1 11122468899999999999986
No 52
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.82 E-value=0.033 Score=56.35 Aligned_cols=85 Identities=13% Similarity=0.105 Sum_probs=55.2
Q ss_pred ccEEEEeeCCceEEEEEEE-eCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCeeeee
Q 019310 95 GLFYALDLGGTNFRVLRVQ-LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (343)
Q Consensus 95 G~fLaIDlGGTNlRv~lV~-l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l~lG 173 (343)
.++|+||+|+|++|+++++ .+|+ ++...+ .+.|.... .+.+++++.+.+++++. +. . .++..||
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~~G~---i~~~~~--~~~~g~~e-~d~~~~~~~i~~~l~~~----~~-~----~~I~~Ig 69 (515)
T 3i8b_A 5 TLVAGVDTSTQSCKVRVTDAETGE---LVRFGQ--AKHPNGTS-VDPSYWWSAFQEAAEQA----GG-L----DDVSALA 69 (515)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCC---EEEEEE--EECCSSSE-ECTHHHHHHHHHHHHHT----TC-S----TTEEEEE
T ss_pred cEEEEEEeccccEEEEEEECCCCe---EEEEEE--EeCCCCce-ECHHHHHHHHHHHHHhc----CC-c----cCceEEE
Confidence 4789999999999999999 6665 554433 33454333 46788999888877653 21 1 3567777
Q ss_pred eeeee----eeeeccCCceEEeeec
Q 019310 174 FTFSF----PVRQTSIASGDLIKWT 194 (343)
Q Consensus 174 ftFSf----Pv~q~~i~~g~Li~Wt 194 (343)
++--. ++|..+---...+.|.
T Consensus 70 is~q~~~~v~~D~~G~pl~~~i~W~ 94 (515)
T 3i8b_A 70 VGGQQHGMVILDNQGNVIRDAMLWN 94 (515)
T ss_dssp EEECSSCBEEECTTSCBCSCEECTT
T ss_pred EeCCcceEEEECCCCCCcCCcceec
Confidence 77655 7786552222234564
No 53
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=95.75 E-value=0.08 Score=49.22 Aligned_cols=51 Identities=14% Similarity=0.114 Sum_probs=35.4
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCC
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGE 160 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~ 160 (343)
.+|+||+|+||+++++++- + .+. .+|++|++ . .+.+++. ..+.++++..+.
T Consensus 3 MlL~IDIGNT~iK~gl~d~--~--~l~----~~~r~~T~-~-~t~de~~----~~l~~ll~~~~~ 53 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG--D--EIK----LRFRHTSK-V-STSDELG----IFLKSVLRENNC 53 (266)
T ss_dssp CEEEEEECSSEEEEEEEET--T--EEE----EEEEEECS-C-CCHHHHH----HHHHHHHHTTTC
T ss_pred eEEEEEECCCeEEEEEEEC--C--EEE----EEEEecCC-C-CCHHHHH----HHHHHHHHHcCC
Confidence 4799999999999999963 2 244 46788877 3 5667654 445556665543
No 54
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=93.36 E-value=0.23 Score=45.24 Aligned_cols=36 Identities=6% Similarity=0.052 Sum_probs=25.2
Q ss_pred EEEEechHHHHhcccccCCCcEEEEEEccccceeEE
Q 019310 225 AALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYV 260 (343)
Q Consensus 225 vaIvNDTvatlla~~y~~~~~~iglIlGTGtNa~y~ 260 (343)
.-.+|.-.|..++..+.++....-+.+|.|+.-+.+
T Consensus 74 ~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~ 109 (276)
T 4ehu_A 74 DKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLK 109 (276)
T ss_dssp SEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEE
T ss_pred CcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEE
Confidence 356899999999888877666666666665554443
No 55
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=93.31 E-value=1.5 Score=41.51 Aligned_cols=53 Identities=13% Similarity=0.137 Sum_probs=34.6
Q ss_pred cHHHHHHHHHHHcCCCceEEEEEechHHHHhcccc--cC--CCcEEEEEEccccceeEE
Q 019310 206 DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY--HN--KDAIAAVILGTGTNAAYV 260 (343)
Q Consensus 206 dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y--~~--~~~~iglIlGTGtNa~y~ 260 (343)
+.++.+.+++++.|++ +..|+|...|+..+... .+ ....+-+=+|-||--..+
T Consensus 151 ~~v~~~~~~~~~aGl~--~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i 207 (377)
T 2ych_A 151 EAVAGVLEALRGAGLV--PVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVL 207 (377)
T ss_dssp HHHHHHHHHHHHTTCE--EEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEE
T ss_pred HHHHHHHHHHHHCCCc--eEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEE
Confidence 4568888888877765 58899999998877532 11 233444556666654433
No 56
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=92.75 E-value=0.26 Score=49.84 Aligned_cols=40 Identities=33% Similarity=0.390 Sum_probs=29.1
Q ss_pred CCC--ceEEEEEechHHHHhcccccCCCcEEEEEEccccceeEE
Q 019310 219 GLD--MRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYV 260 (343)
Q Consensus 219 ~l~--v~vvaIvNDTvatlla~~y~~~~~~iglIlGTGtNa~y~ 260 (343)
|++ +.|++-.=|+.+++++.. . ....+.+++||++-....
T Consensus 269 Gl~~g~pV~~g~~D~~aa~~g~~-~-~~g~~~~s~GTs~~~~~~ 310 (538)
T 4bc3_A 269 GFPPGCKVVAFTGDNPASLAGMR-L-EEGDIAVSLGTSDTLFLW 310 (538)
T ss_dssp CCCTTCEEECCEEHHHHHHHHTT-C-CTTCEEEEESSSEEEEEE
T ss_pred CCCCCCeEEEecccHHhhhhccc-c-CCCcEEEEeccchheEEe
Confidence 553 667888899999999875 2 345678899998655444
No 57
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=91.45 E-value=3.8 Score=36.59 Aligned_cols=30 Identities=13% Similarity=0.247 Sum_probs=21.1
Q ss_pred HHHHHHHHHcCCCceEEEEEechHHHHhcccc
Q 019310 209 GELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240 (343)
Q Consensus 209 ~lL~~al~r~~l~v~vvaIvNDTvatlla~~y 240 (343)
+.+++++++.|++ +..++++..|.+++...
T Consensus 109 ~~~~~~~~~~g~~--~~~i~~e~~A~a~~~~~ 138 (272)
T 3h1q_A 109 EACGHVVAGAGLE--LVTLVDEPVAAARALGI 138 (272)
T ss_dssp THHHHHHHHTTCE--EEEEECHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCe--eeecccHHHHHHHHHcC
Confidence 3456666655664 67899999999887544
No 58
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=89.59 E-value=0.66 Score=42.95 Aligned_cols=44 Identities=14% Similarity=0.142 Sum_probs=30.8
Q ss_pred EEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHH
Q 019310 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAA 149 (343)
Q Consensus 97 fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~ 149 (343)
+|+||+|+||+++++++ ++ .+. ..|++++... .+.+++..++.+
T Consensus 2 lL~IDIGNT~ik~gl~~--~~--~l~----~~~r~~T~~~-~t~de~~~~l~~ 45 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE--EG--ELR----QHWRMETDRH-KTEDEYGMLVKQ 45 (268)
T ss_dssp EEEEEECSSEEEEEEEE--TT--EEE----EEEEEECCTT-CCHHHHHHHHHH
T ss_pred EEEEEECcCcEEEEEEE--CC--EEE----EEEEecCCCc-CCHHHHHHHHHH
Confidence 68999999999999996 22 233 3567776543 566777666654
No 59
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=87.85 E-value=1.2 Score=40.81 Aligned_cols=37 Identities=5% Similarity=0.022 Sum_probs=25.9
Q ss_pred EEEechHHHHhcccccCCCcEEEEEEccccceeEEcc
Q 019310 226 ALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVER 262 (343)
Q Consensus 226 aIvNDTvatlla~~y~~~~~~iglIlGTGtNa~y~e~ 262 (343)
.++|+..+...+..|..++...-+=+|.+..-++..+
T Consensus 78 ~~v~Ei~ah~~ga~~~~~~~~~vidiGGqd~k~i~~~ 114 (270)
T 1hux_A 78 KQMSELSCHAMGASFIWPNVHTVIDIGGQDVKVIHVE 114 (270)
T ss_dssp EEECHHHHHHHHHHHHCTTCCEEEEEETTEEEEEEEE
T ss_pred CCcccHHHHHHHHHHhCCCCCEEEEECCCceEEEEEe
Confidence 4589999999888887777666566776655444443
No 60
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=87.31 E-value=2.8 Score=40.14 Aligned_cols=52 Identities=17% Similarity=0.163 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHcCCCceEEEEEechHHHHhcccccC-----CCcEEEEEEccccceeEE
Q 019310 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN-----KDAIAAVILGTGTNAAYV 260 (343)
Q Consensus 207 v~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~-----~~~~iglIlGTGtNa~y~ 260 (343)
-.+.++++..+.|+ +++.++|+..|+.++..... ....+-+=+|-||--..+
T Consensus 165 ~r~~~~~a~~~AGl--~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv 221 (409)
T 4gni_A 165 QKAALIAAAAAADL--EVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTV 221 (409)
T ss_dssp HHHHHHHHHHHTTC--EEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEE
T ss_pred HHHHHHHHHHHcCC--CeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEE
Confidence 45678888887777 46899999999999876642 223333336777655444
No 61
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=86.41 E-value=3 Score=39.66 Aligned_cols=53 Identities=17% Similarity=0.161 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHcCCCceEEEEEechHHHHhcccccC------CCcEEEEEEccccceeEEc
Q 019310 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN------KDAIAAVILGTGTNAAYVE 261 (343)
Q Consensus 207 v~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~------~~~~iglIlGTGtNa~y~e 261 (343)
-.+.++++..+.|++ ++.++|+.+|++++..... ....+=+=+|-||--..+.
T Consensus 173 ~r~~~~~a~~~AGl~--~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~ 231 (404)
T 3i33_A 173 QRQATKDAGTITGLN--VLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSIL 231 (404)
T ss_dssp HHHHHHHHHHHHTCE--EEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHHcCCC--eEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEE
Confidence 456777888777774 6899999999998765532 2333434467776654443
No 62
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=85.71 E-value=4.6 Score=38.01 Aligned_cols=52 Identities=21% Similarity=0.181 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHcCCCceEEEEEechHHHHhccccc-C--CCcEEEEEEccccceeEE
Q 019310 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH-N--KDAIAAVILGTGTNAAYV 260 (343)
Q Consensus 207 v~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~-~--~~~~iglIlGTGtNa~y~ 260 (343)
-.+.+.++..+.|++ ++.++|+.+|++++.... . ....+-+=+|-||--..+
T Consensus 168 ~r~~~~~a~~~aGl~--~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv 222 (394)
T 3qfu_A 168 QRQATKDAGTIAGLN--VLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSL 222 (394)
T ss_dssp HHHHHHHHHHHTTCE--EEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEE
T ss_pred HHHHHHHHHHHcCCc--eEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEE
Confidence 356677787777764 689999999999876443 2 223333336666664333
No 63
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=77.46 E-value=31 Score=33.42 Aligned_cols=54 Identities=13% Similarity=0.051 Sum_probs=34.8
Q ss_pred cHHHHHHHHHHHcCCCceEEEEEechHHHHhcccccC--CCcEEEEEEccccce-eEEc
Q 019310 206 DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN--KDAIAAVILGTGTNA-AYVE 261 (343)
Q Consensus 206 dv~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~--~~~~iglIlGTGtNa-~y~e 261 (343)
+.++.+.+++++.|++ +..++|...|+.++....+ ....+-+=+|-||-- +.+.
T Consensus 168 ~~v~n~~~~~~~AGL~--v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~ 224 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKS--PFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYK 224 (419)
T ss_dssp HHHHHHHHHHHTTSCS--CEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEE
T ss_pred HHHHHHHHHHHHcCCc--EEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEE
Confidence 4678888999888876 4678999999876643221 123333447777654 4443
No 64
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=73.04 E-value=14 Score=37.56 Aligned_cols=54 Identities=19% Similarity=0.175 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHcCCCceEEEEEechHHHHhcccccC---CCcEEEEEEccccceeEEcc
Q 019310 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN---KDAIAAVILGTGTNAAYVER 262 (343)
Q Consensus 207 v~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~---~~~~iglIlGTGtNa~y~e~ 262 (343)
-.+.+++|....|++ ++.++|+.+|+.++..... ....+-+=+|.||--..+..
T Consensus 150 qr~a~~~Aa~~AGl~--v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~ 206 (605)
T 4b9q_A 150 QRQATKDAGRIAGLE--VKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIE 206 (605)
T ss_dssp HHHHHHHHHHHTTCE--EEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHHcCCc--eEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEE
Confidence 456777888777774 6889999999998764432 23334444777776544443
No 65
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=68.31 E-value=33 Score=33.93 Aligned_cols=48 Identities=19% Similarity=0.246 Sum_probs=30.2
Q ss_pred HHHHHHHHHHcCCCceEEEEEechHHHHhcccccCCCcEEEEE--Eccccce
Q 019310 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVI--LGTGTNA 257 (343)
Q Consensus 208 ~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~~~~~iglI--lGTGtNa 257 (343)
.+.+.+|....|+ +++.++|..+|++++...........+| +|-||--
T Consensus 125 r~a~~~a~~~AGl--~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~D 174 (509)
T 2v7y_A 125 RQATKDAGRIAGL--EVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFD 174 (509)
T ss_dssp HHHHHHHHHHTTC--EEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEE
T ss_pred HHHHHHHHHHcCC--CeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEE
Confidence 4566677766666 4689999999999876553322233334 4555443
No 66
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=64.42 E-value=25 Score=32.73 Aligned_cols=62 Identities=21% Similarity=0.269 Sum_probs=40.8
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCccc-CC-chHHHHHHHHHHHHHHHh
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVAT 157 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~-~~-~~~lFd~IA~~I~~fl~~ 157 (343)
.|-+||+|-.++|..+.+.....-.++.......++-+.+.. +. .++-.+...++++.|.+.
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 68 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVI 68 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHH
Confidence 478999999999999999865322334333334444444421 11 567778888888888654
No 67
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=62.27 E-value=35 Score=34.24 Aligned_cols=48 Identities=19% Similarity=0.178 Sum_probs=30.4
Q ss_pred HHHHHHHHHHcCCCceEEEEEechHHHHhcccccC----CCcEEEEEEccccce
Q 019310 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN----KDAIAAVILGTGTNA 257 (343)
Q Consensus 208 ~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~----~~~~iglIlGTGtNa 257 (343)
.+.+.+|....|+ +++.++|+.+|+.++..... ....+-+=+|-||--
T Consensus 155 r~a~~~A~~~AGl--~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~D 206 (554)
T 1yuw_A 155 RQATKDAGTIAGL--NVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFD 206 (554)
T ss_dssp HHHHHHHHHTTTC--EEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEE
T ss_pred HHHHHHHHHHcCC--CeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEE
Confidence 4566777766666 46899999999988755432 233344445656543
No 68
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=60.65 E-value=21 Score=35.71 Aligned_cols=76 Identities=18% Similarity=0.093 Sum_probs=46.0
Q ss_pred eeecccccCCCCcccccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCccc-C-CchHHHHHHHHHHHHHHHh
Q 019310 80 MLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-G-SSHELFDYIAAALAKFVAT 157 (343)
Q Consensus 80 MlPs~v~~lP~G~E~G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~-~-~~~~lFd~IA~~I~~fl~~ 157 (343)
|-|.+.. |.-...-.|-+||+|-.++|..+++..+....++.......++-+.+.. + =.++-.+...++++.|.+.
T Consensus 2 ~~~~~~~--~~~~~~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~ 79 (508)
T 3hi0_A 2 MTRSEAQ--GRLTGLAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVL 79 (508)
T ss_dssp --CCCCS--SSCTTCCCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCccccc--cccccCCeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 4455532 3223334689999999999999998865433334333234445444321 1 1567788888888888653
No 69
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=56.77 E-value=27 Score=32.55 Aligned_cols=62 Identities=11% Similarity=0.168 Sum_probs=38.4
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCccc-C-CchHHHHHHHHHHHHHHHh
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-G-SSHELFDYIAAALAKFVAT 157 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~-~-~~~~lFd~IA~~I~~fl~~ 157 (343)
.|-+||+|-+++|+.+++..+.....+.......++-+.+.. + =.++-.+...+++.+|.+.
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 76 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKL 76 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 588999999999999999864322233222233333333321 1 1356667777888888653
No 70
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=56.57 E-value=12 Score=35.13 Aligned_cols=52 Identities=17% Similarity=0.240 Sum_probs=30.9
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHH
Q 019310 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKF 154 (343)
Q Consensus 95 G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~f 154 (343)
..+||+|=|.||||+-+++ +| .++.+. +-|..++.....++-.-+.+.+.++
T Consensus 6 ~~~IavDWGTs~lRa~l~~-~g---~vl~~~----~~~~Gv~~~~~~~f~~~l~~~~~~w 57 (295)
T 3nuw_A 6 ARYIAIDWGSTNLRAWLYQ-GE---ECLESR----QSEAGVTRLNGRSPAAVLAEITQHW 57 (295)
T ss_dssp CEEEEEEECSSCEEEEEEE-TT---EEEEEE----EESCCTTCCTTCCHHHHHHHHTTTT
T ss_pred ccEEEEEecchheeeeeec-CC---ceehhh----cCCCchhhcCcccHHHHHHHHHHHh
Confidence 3589999999999999997 44 355332 2344444333334434444444443
No 71
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=54.21 E-value=19 Score=33.86 Aligned_cols=52 Identities=21% Similarity=0.249 Sum_probs=34.6
Q ss_pred ccccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHH
Q 019310 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAK 153 (343)
Q Consensus 93 E~G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~ 153 (343)
+.|.++.+|+||.++=++++++.+.. ++.. ....+| ..++++.++|++.|+.
T Consensus 188 ~~~~vlVvDIGgGTtDv~vi~~~~g~--~v~~--~s~~~~-----lGg~~i~~~I~~~i~~ 239 (346)
T 2fsj_A 188 QPGYGVVIDVGSRTTDVLTINLMDME--PVVE--LSFSLQ-----IGVGDAISALSRKIAK 239 (346)
T ss_dssp CSSEEEEEEECSSCEEEEEEETTTTE--ECGG--GCEEES-----CCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCcEEEEEEEecCCE--EEee--cCCCcc-----hhHHHHHHHHHHHHHH
Confidence 45789999999999999999985531 1110 012222 3467888888876543
No 72
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=52.01 E-value=10 Score=36.22 Aligned_cols=54 Identities=20% Similarity=0.348 Sum_probs=32.3
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHH
Q 019310 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFV 155 (343)
Q Consensus 95 G~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl 155 (343)
-.+||||=|.||||+-+++-+|. ++.+ .+-+..++....+++-+-+.+.+.+++
T Consensus 7 ~~~IavDWGTSnlRa~l~~~~g~---vl~~----~~~~~Gv~~~~~~~f~~~l~~l~~~w~ 60 (330)
T 3t69_A 7 GYYAAVDWGTSSFRLWIIGEDGA---VLAE----RRSAEGMTTAAKTGFHTILDGHLAAVS 60 (330)
T ss_dssp -CEEEEEECSSCEEEEEECTTSC---EEEE----EEESCCHHHHHHHCHHHHHHHHHHHTT
T ss_pred CCEEEEEecchheehheecCCCC---chhh----hcCCcchhhcCcccHHHHHHHHHHHhh
Confidence 35999999999999999866553 5532 234544442223344444555555554
No 73
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=49.89 E-value=38 Score=28.59 Aligned_cols=22 Identities=18% Similarity=0.220 Sum_probs=19.4
Q ss_pred cEEEEeeCCceEEEEEEEeCCC
Q 019310 96 LFYALDLGGTNFRVLRVQLGGR 117 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~ 117 (343)
.+|+||.|-++.=.++++..|+
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~ 23 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGR 23 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETT
T ss_pred EEEEEccCCCCeeEEEEEecCC
Confidence 3799999999999999998765
No 74
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=45.50 E-value=53 Score=32.76 Aligned_cols=63 Identities=19% Similarity=0.223 Sum_probs=41.7
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCccc-CC-chHHHHHHHHHHHHHHHhc
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVATE 158 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~-~~-~~~lFd~IA~~I~~fl~~~ 158 (343)
.|-+||+|-.++|..+++..+....++.......++-+.+.. +. .++-.+...+++..|.+..
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~ 76 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERL 76 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999864322333332233344444321 11 4678888889999997654
No 75
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=44.12 E-value=13 Score=34.69 Aligned_cols=19 Identities=21% Similarity=0.436 Sum_probs=16.1
Q ss_pred cccEEEEeeCCceEEEEEE
Q 019310 94 KGLFYALDLGGTNFRVLRV 112 (343)
Q Consensus 94 ~G~fLaIDlGGTNlRv~lV 112 (343)
...+++||+|+|+.|++++
T Consensus 19 ~~~~iGIDiGsTt~K~V~~ 37 (287)
T 2ews_A 19 SHMKVGIDAGGTLIKIVQE 37 (287)
T ss_dssp --CEEEEEECSSEEEEEEE
T ss_pred CCeEEEEEEChhhEEEEEE
Confidence 3579999999999999987
No 76
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=43.17 E-value=2.9e+02 Score=30.24 Aligned_cols=102 Identities=11% Similarity=0.104 Sum_probs=56.2
Q ss_pred cEEEEeeC-Cc----eEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCee
Q 019310 96 LFYALDLG-GT----NFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (343)
Q Consensus 96 ~fLaIDlG-GT----NlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l 170 (343)
.+||||-| || -.++++|+-.|+ ++... .-|+-|. .....++- .+.+.+|+.+++.. ..
T Consensus 520 ~VlaldpG~~~~~~~g~k~a~vd~~G~---~l~~~-~i~~~~~--~~~~~~~~----~~~l~~li~~~~~~-------~I 582 (1030)
T 3psf_A 520 KILSLTCGQGRFGADAIIAVYVNRKGD---FIRDY-KIVDNPF--DKTNPEKF----EDTLDNIIQSCQPN-------AI 582 (1030)
T ss_dssp CEEEEECTTCCTTTSCEEEEEECTTSC---EEEEE-EECSCTT--CSSCCHHH----HHHHHHHHHHHCCS-------EE
T ss_pred eEEEecCCCCCCCCCCeEEEEECCCCC---EEEEE-EEcCCCC--ChhhHHHH----HHHHHHHHHHcCCc-------EE
Confidence 69999999 43 689999987776 44322 2222232 11111111 36788888887642 34
Q ss_pred eeeeeeeeeeeeccCCceEEeeeccccccCCCCCCcHHHHHHHHHHHcC------CCceEEEEEechHHHHhcccc
Q 019310 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG------LDMRVAALVNDTIGTLAGGRY 240 (343)
Q Consensus 171 ~lGftFSfPv~q~~i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~------l~v~vvaIvNDTvatlla~~y 240 (343)
.||= .|- +-..+++.+.+.+.++. .++. +.++||+.|.+.+..-
T Consensus 583 aIGn-~s~------------------------et~~l~~~l~~~i~~~~~~~~~~~~i~-~~iV~e~gAsvYsaS~ 632 (1030)
T 3psf_A 583 GING-PNP------------------------KTQKFYKRLQEVLHKKQIVDSRGHTIP-IIYVEDEVAIRYQNSE 632 (1030)
T ss_dssp EECC-SST------------------------HHHHHHHHHHHHHHHTTCBCTTSCBCC-EEECCCTTHHHHHTSH
T ss_pred EECC-CCH------------------------HHHHHHHHHHHHHHhhccccccCCCcc-EEEecchHHHHHHhhH
Confidence 4441 110 00235555555555432 2232 6799999988776644
No 77
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=41.83 E-value=3e+02 Score=30.70 Aligned_cols=102 Identities=11% Similarity=0.108 Sum_probs=56.8
Q ss_pred cEEEEeeC-Cc----eEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHHHHHHhcCCCCCCCCCCee
Q 019310 96 LFYALDLG-GT----NFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (343)
Q Consensus 96 ~fLaIDlG-GT----NlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~~fl~~~~~~~~~~~~~~l 170 (343)
..||||-| || -.++++|+-.|+ ++... .-|+.|. .....++ -.+.+.+|+.++... ..
T Consensus 517 ~VlaldpG~r~~g~~g~k~a~vD~~G~---vl~~~-~i~~~~~--~~~~~~~----a~~~l~~li~~~~~~-------vI 579 (1219)
T 3psi_A 517 KILSLTCGQGRFGADAIIAVYVNRKGD---FIRDY-KIVDNPF--DKTNPEK----FEDTLDNIIQSCQPN-------AI 579 (1219)
T ss_dssp CEEEEECTTCCTTTTCEEEEEECTTSC---EEEEE-EECSCTT--CSSCSHH----HHHHHHHHHHHHCCS-------EE
T ss_pred eEEEecCCCCCCCCCceEEEEECCCCC---EEEEE-EEcCCCC--ChhhHHH----HHHHHHHHHHHcCCc-------EE
Confidence 69999999 43 789999987776 44322 2222232 1111111 136788888887642 34
Q ss_pred eeeeeeeeeeeeccCCceEEeeeccccccCCCCCCcHHHHHHHHHHHcC------CCceEEEEEechHHHHhcccc
Q 019310 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG------LDMRVAALVNDTIGTLAGGRY 240 (343)
Q Consensus 171 ~lGftFSfPv~q~~i~~g~Li~WtKgF~~~~~~G~dv~~lL~~al~r~~------l~v~vvaIvNDTvatlla~~y 240 (343)
.||= .| . +-..+++.+.+.+.++. .++. +.++||+.|.+.+..=
T Consensus 580 aIGn-~s--r----------------------et~~l~~~l~~~i~~~~~~~~~~~~i~-vviV~e~gAsvYsaS~ 629 (1219)
T 3psi_A 580 GING-PN--P----------------------KTQKFYKRLQEVLHKKQIVDSRGHTIP-IIYVEDEVAIRYQNSE 629 (1219)
T ss_dssp EECC-SS--T----------------------HHHHHHHHHHHHHHHTTCBCSSSCBCC-EEECCCTTHHHHHTSH
T ss_pred EECC-CC--H----------------------HHHHHHHHHHHHHHhhccccccCCCcc-EEEECchHHHHHhcCH
Confidence 4442 11 0 00235555555555432 2232 6799999988776644
No 78
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=39.27 E-value=56 Score=30.81 Aligned_cols=63 Identities=13% Similarity=0.163 Sum_probs=39.8
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcc-eeEEEeeEEeecCCCccc-CC-chHHHHHHHHHHHHHHHhc
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREG-RVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVATE 158 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~-~i~~~~~~~~~Ip~~~~~-~~-~~~lFd~IA~~I~~fl~~~ 158 (343)
.|-+||+|-.++|+.+.+...++. .++.......++-+.+.. +. .++-.+...+++.+|.+..
T Consensus 17 ~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~ 82 (343)
T 3cer_A 17 TVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVI 82 (343)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 488999999999999999863322 223222223333333321 11 4577788888899887654
No 79
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=37.94 E-value=1.4e+02 Score=27.55 Aligned_cols=30 Identities=27% Similarity=0.432 Sum_probs=22.8
Q ss_pred CCCCcccccEEEEeeCCceEEEEEEEeCCC
Q 019310 88 LPTGDEKGLFYALDLGGTNFRVLRVQLGGR 117 (343)
Q Consensus 88 lP~G~E~G~fLaIDlGGTNlRv~lV~l~g~ 117 (343)
+..+.....++.+|+||.++-+.+++..+.
T Consensus 199 ~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~ 228 (394)
T 3qfu_A 199 LDKSDKEHQIIVYDLGGGTFDVSLLSIENG 228 (394)
T ss_dssp TTSCSSCEEEEEEEECSSCEEEEEEEEETT
T ss_pred hccCCCCceEEEEEcCCCceeEEEEEEeCC
Confidence 333334457899999999999999988643
No 80
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=35.62 E-value=89 Score=29.57 Aligned_cols=22 Identities=18% Similarity=0.202 Sum_probs=19.2
Q ss_pred cccEEEEeeCCceEEEEEEEeC
Q 019310 94 KGLFYALDLGGTNFRVLRVQLG 115 (343)
Q Consensus 94 ~G~fLaIDlGGTNlRv~lV~l~ 115 (343)
+-++.+||+|-+.+|+.+.+..
T Consensus 2 ~~~~avID~GSns~Rl~I~~~~ 23 (353)
T 3aap_A 2 HSCIAVIDAGSTGSRLHIYSYD 23 (353)
T ss_dssp CEEEEEEEECSSCEEEEEEEEE
T ss_pred CCEEEEEEcCCCCeEEEEEEEc
Confidence 3468999999999999999985
No 81
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=34.17 E-value=25 Score=33.59 Aligned_cols=19 Identities=21% Similarity=0.574 Sum_probs=13.8
Q ss_pred EEEEeeCCceEEEEEEEeC
Q 019310 97 FYALDLGGTNFRVLRVQLG 115 (343)
Q Consensus 97 fLaIDlGGTNlRv~lV~l~ 115 (343)
+|++|+||-|+|+++++-+
T Consensus 2 iiG~DIGGAn~K~a~~~~~ 20 (334)
T 3cet_A 2 ILGIDIGGANTKITELHEN 20 (334)
T ss_dssp EEEEEEC--CEEEEEECST
T ss_pred eeEEEecccceeeeeecCC
Confidence 6899999999999885333
No 82
>3tai_A DNA double-strand break repair protein NURA; recombination, hydrolase; HET: DNA; 2.82A {Pyrococcus furiosus} PDB: 3tal_A* 3taz_A*
Probab=32.41 E-value=42 Score=33.27 Aligned_cols=48 Identities=17% Similarity=0.330 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCcccccEEEEe
Q 019310 50 TPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALD 101 (343)
Q Consensus 50 ~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lP~G~E~G~fLaID 101 (343)
+|++.+++|.+-+.+++++-.+.- .+.|++++...+|+..+ ..+.|+|
T Consensus 24 is~~~~~~I~~~L~~~l~~~~~~~---~ie~i~~~W~elPe~~~-~~iaAVD 71 (471)
T 3tai_A 24 LSKQSIERITKILLDELENVRENE---QIRNIINSWKPLPSPEK-SSIYAVD 71 (471)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCS---SHHHHHHTCBCCCCCCC-CEEEEEE
T ss_pred ccHhHHHHHHHHHHHHHHHHHhhh---chhhhhhhceECCCCCC-ceEEEec
Confidence 799999999999999998888653 67899999999997644 4788888
No 83
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=30.03 E-value=2.2e+02 Score=23.11 Aligned_cols=23 Identities=26% Similarity=0.226 Sum_probs=19.1
Q ss_pred ccEEEEeeCCceEEEEEEEeCCC
Q 019310 95 GLFYALDLGGTNFRVLRVQLGGR 117 (343)
Q Consensus 95 G~fLaIDlGGTNlRv~lV~l~g~ 117 (343)
|.+||||+|-..+=|++-+..+.
T Consensus 3 ~~iLglD~G~kriGvAvsd~~~~ 25 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRITG 25 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETTTT
T ss_pred CeEEEEEeCCCEEEEEEEcCCCC
Confidence 57999999999998988877543
No 84
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=29.83 E-value=84 Score=32.49 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=24.0
Q ss_pred echHHHHhcccccCCCcEEEEEEccccceeEEccc
Q 019310 229 NDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERA 263 (343)
Q Consensus 229 NDTvatlla~~y~~~~~~iglIlGTGtNa~y~e~~ 263 (343)
=|++|-+++......+ .+.+.+.=|||+=.+...
T Consensus 355 aDi~Ag~la~~~~~~~-~~~L~iDiGTNgEivL~~ 388 (631)
T 3zyy_X 355 GDITSGVLYTGLANSD-EITLFIDIGTNGEMVLGN 388 (631)
T ss_dssp HHHHHHHHHHTTTSCS-SCEEEEECSSEEEEEEEC
T ss_pred HHHHHHHHhcCcccCC-CCEEEEEcCCCeEEEEee
Confidence 4888888887664332 367888888998777543
No 85
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=29.52 E-value=98 Score=23.78 Aligned_cols=21 Identities=24% Similarity=0.177 Sum_probs=17.1
Q ss_pred cEEEEeeCCceEEEEEEEeCC
Q 019310 96 LFYALDLGGTNFRVLRVQLGG 116 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g 116 (343)
.+||||+|-..+=+++-+..+
T Consensus 2 riLglD~G~kriGvAvsd~~~ 22 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEGV 22 (98)
T ss_dssp CEEEEEESSSEEEEEEECSCC
T ss_pred cEEEEEeCCCEEEEEEEeCCC
Confidence 479999999988888876544
No 86
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=28.92 E-value=26 Score=32.80 Aligned_cols=49 Identities=18% Similarity=0.184 Sum_probs=29.7
Q ss_pred HHHHHHHHHHcCCCceEEEEEechHHHHhcccccCC-CcEEEEE--Ecccccee
Q 019310 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK-DAIAAVI--LGTGTNAA 258 (343)
Q Consensus 208 ~~lL~~al~r~~l~v~vvaIvNDTvatlla~~y~~~-~~~iglI--lGTGtNa~ 258 (343)
.+.+.+++++.|+ +++.++|..+|++++...... ...-.+| +|-||--.
T Consensus 151 r~~~~~a~~~aGl--~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdv 202 (383)
T 1dkg_D 151 RQATKDAGRIAGL--EVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDI 202 (383)
T ss_dssp HHHHHHHHHHTTC--EESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEE
T ss_pred HHHHHHHHHHcCC--ceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEE
Confidence 4556667766666 457899999999987655432 2333344 55555433
No 87
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=28.33 E-value=2.2e+02 Score=26.43 Aligned_cols=24 Identities=25% Similarity=0.393 Sum_probs=20.4
Q ss_pred cccEEEEeeCCceEEEEEEEeCCC
Q 019310 94 KGLFYALDLGGTNFRVLRVQLGGR 117 (343)
Q Consensus 94 ~G~fLaIDlGGTNlRv~lV~l~g~ 117 (343)
...++.+|+||.++-+.+++..+.
T Consensus 213 ~~~vlV~D~GgGT~dvsv~~~~~~ 236 (404)
T 3i33_A 213 EKNVLIFDLGGGTFDVSILTIEDG 236 (404)
T ss_dssp CCEEEEEEECSSCEEEEEEEEETT
T ss_pred CceEEEEECCCCcEEEEEEEEeCC
Confidence 346899999999999999998653
No 88
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=27.96 E-value=91 Score=23.19 Aligned_cols=36 Identities=8% Similarity=0.171 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 019310 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (343)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (343)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1mul_A 4 TQLIDVIAEKAELSKTQAKAALESTLAAITESLKEG 39 (90)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 466777777888999999999999999999999763
No 89
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=26.66 E-value=2.4e+02 Score=29.03 Aligned_cols=23 Identities=9% Similarity=0.223 Sum_probs=20.0
Q ss_pred cccEEEEeeCCceEEEEEEEeCC
Q 019310 94 KGLFYALDLGGTNFRVLRVQLGG 116 (343)
Q Consensus 94 ~G~fLaIDlGGTNlRv~lV~l~g 116 (343)
...++.+|+||.++-+.++++.+
T Consensus 196 ~~~vlV~DlGGGT~Dvsv~~~~~ 218 (675)
T 3d2f_A 196 PRIVAFVDIGHSSYTCSIMAFKK 218 (675)
T ss_dssp CEEEEEEEECSSCEEEEEEEEET
T ss_pred CcEEEEEEcCCCcEEEEEEEecC
Confidence 34699999999999999999854
No 90
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=26.65 E-value=93 Score=23.08 Aligned_cols=36 Identities=14% Similarity=0.306 Sum_probs=30.7
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 019310 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (343)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (343)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1b8z_A 4 KELIDRVAKKAGAKKKDVKLILDTILETITEALAKG 39 (90)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 456677777778999999999999999999999763
No 91
>1p71_A DNA-binding protein HU; protein-DNA complex, DNA bending, DNA binding protein-DN; 1.90A {Anabaena SP} SCOP: a.55.1.1 PDB: 1p51_A 1p78_A
Probab=26.49 E-value=93 Score=23.38 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=30.7
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 019310 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (343)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (343)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (94)
T 1p71_A 4 GELVDAVAEKASVTKKQADAVLTAALETIIEAVSSG 39 (94)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 456677777778999999999999999999999763
No 92
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=26.27 E-value=2.9e+02 Score=23.23 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=19.8
Q ss_pred cEEEEeeCCceEEEEEEEeCCC
Q 019310 96 LFYALDLGGTNFRVLRVQLGGR 117 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~ 117 (343)
.+|+||-|-++.=.++|+..|+
T Consensus 2 rILGIDPGl~~tG~gvi~~~g~ 23 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVEGK 23 (166)
T ss_dssp EEEEEECCSSEEEEEEEEECSS
T ss_pred EEEEEccccCceEEEEEEecCC
Confidence 4799999999999999999875
No 93
>1nxu_A Hypothetical oxidoreductase YIAK; hypothetical protein, structural genomics, PSI, protein structure initiative; 1.80A {Escherichia coli} SCOP: c.122.1.1 PDB: 1s20_A*
Probab=25.98 E-value=56 Score=30.96 Aligned_cols=56 Identities=16% Similarity=0.291 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCc
Q 019310 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92 (343)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lP~G~ 92 (343)
..++++++.+.-.....+.+.-+.+++.+.+-=..|..+|+ +.+||.|+..+-.|.
T Consensus 5 ~~~l~~~~~~~l~~~G~~~~~A~~vA~~lv~adl~G~~SHG---v~rlp~Y~~~l~~G~ 60 (333)
T 1nxu_A 5 FEQLKAAFNRVLISRGVDSETADACAEMFARTTESGVYSHG---VNRFPRFIQQLENGD 60 (333)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCCTTT---GGGHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCccccC---HHHHHHHHHHHHcCC
Confidence 45677788887778889999999999999987777777653 789999998766664
No 94
>3i0p_A Malate dehydrogenase; araerobic parasitic protozoan, amoebic dysentery, ssgcid, NI infectious disease, structural genomics; HET: NAD; 2.60A {Entamoeba histolytica}
Probab=25.53 E-value=68 Score=30.76 Aligned_cols=58 Identities=17% Similarity=0.273 Sum_probs=47.7
Q ss_pred chHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeee-cccccCCCCc
Q 019310 32 GRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLI-SYVDNLPTGD 92 (343)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlP-s~v~~lP~G~ 92 (343)
-...++++++.+.-....++.+.-+.+++.+.+-=..|..+|+ +.+|| .|+..+-.|.
T Consensus 9 v~~~~l~~~~~~~l~~~G~~~~~A~~vA~~Lv~Adl~G~~SHG---v~rlp~~Y~~~l~~G~ 67 (365)
T 3i0p_A 9 VSIDTIKEFMYQVLLKVGSDEENARMVRDTLIAADLRGMDTHG---IQRFKTVYIDRIKKGM 67 (365)
T ss_dssp ECHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTSS---GGGHHHHTHHHHHTTC
T ss_pred ecHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcccC---HhHhHHHHHHHHHcCC
Confidence 3566788888888888899999999999999987777877653 78999 9998766664
No 95
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=25.51 E-value=1e+02 Score=23.12 Aligned_cols=36 Identities=11% Similarity=0.196 Sum_probs=30.6
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 019310 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (343)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (343)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 7 ~eLi~~ia~~~~lsk~~~~~~v~~~~~~i~~~L~~g 42 (93)
T 3rhi_A 7 TELIKNVAQNAEISQKEATVVVQTVVESITNTLAAG 42 (93)
T ss_dssp CHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356667777778999999999999999999999763
No 96
>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E DNA binding protein; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=25.29 E-value=94 Score=23.12 Aligned_cols=36 Identities=8% Similarity=0.170 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 019310 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (343)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (343)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 2o97_B 4 SQLIDKIAAGADISKAAAGRALDAIIASVTESLKEG 39 (90)
T ss_dssp HHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 466777777888999999999999999999999763
No 97
>1nvp_D Transcription initiation factor IIA gamma chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: a.32.1.1 b.56.1.1
Probab=24.83 E-value=1.2e+02 Score=24.11 Aligned_cols=41 Identities=17% Similarity=0.028 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 019310 36 RAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGS 76 (343)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s 76 (343)
.+.+.|+++.+.-.++++.-.+|...|-.-|.+.|+.+-.|
T Consensus 13 aL~dtLdEli~~~~Isp~la~kVL~~FDksi~~aL~~~vks 53 (108)
T 1nvp_D 13 SLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRN 53 (108)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 48899999999999999999999999999999999864334
No 98
>3c4i_A DNA-binding protein HU homolog; dimerization by four helix bundle interaction, DNA condensat binding; 2.04A {Mycobacterium tuberculosis}
Probab=24.46 E-value=1e+02 Score=23.38 Aligned_cols=36 Identities=6% Similarity=0.152 Sum_probs=30.6
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 019310 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (343)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (343)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eLi~~ia~~~~lsk~~~~~~l~~~~~~i~~~L~~g 39 (99)
T 3c4i_A 4 AELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKG 39 (99)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356667777778999999999999999999999763
No 99
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=24.01 E-value=2.7e+02 Score=25.91 Aligned_cols=23 Identities=22% Similarity=0.278 Sum_probs=19.9
Q ss_pred ccEEEEeeCCceEEEEEEEeCCC
Q 019310 95 GLFYALDLGGTNFRVLRVQLGGR 117 (343)
Q Consensus 95 G~fLaIDlGGTNlRv~lV~l~g~ 117 (343)
..++.+|+||.++-+.++++.+.
T Consensus 205 ~~vlv~D~GgGT~dvsv~~~~~~ 227 (409)
T 4gni_A 205 KIIVVADLGGSRSDVTVLASRSG 227 (409)
T ss_dssp EEEEEEEECSSCEEEEEEEEETT
T ss_pred CEEEEEECCCCceEEEEEEEeCC
Confidence 36999999999999999988653
No 100
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=24.00 E-value=48 Score=28.46 Aligned_cols=63 Identities=13% Similarity=0.207 Sum_probs=37.4
Q ss_pred CCCCCCcHHHHHHHHHHHcCCCce-EEEEEech-----HHHHhccccc-CCCcEEEEEEccccceeEEcc
Q 019310 200 EDTVGEDVVGELTKAMERIGLDMR-VAALVNDT-----IGTLAGGRYH-NKDAIAAVILGTGTNAAYVER 262 (343)
Q Consensus 200 ~~~~G~dv~~lL~~al~r~~l~v~-vvaIvNDT-----vatlla~~y~-~~~~~iglIlGTGtNa~y~e~ 262 (343)
+|--|.++++.|.+.|+++|..|. +-.--.|+ .+..++.+.. +...+-=+|+|||.+.+..-+
T Consensus 28 sDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYPd~a~~va~~V~~g~~d~GIliCGTGiG~sIaAN 97 (166)
T 3s5p_A 28 SDHGGRDLRMFLQQRASAHGYEVMDLGTESDASVDYPDFAKIGCEAVTSGRADCCILVCGTGIGISIAAN 97 (166)
T ss_dssp ECGGGHHHHHHHHHHHHHTTCEEEEEEC--------CHHHHHHHHHHHTTSCSEEEEEESSSHHHHHHHH
T ss_pred ECchHHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCcEEEEEcCCcHHHHHHhh
Confidence 344578899999999998887642 22112332 2333333332 344555679999999887643
No 101
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=23.94 E-value=2.4e+02 Score=27.96 Aligned_cols=23 Identities=26% Similarity=0.450 Sum_probs=20.0
Q ss_pred cccEEEEeeCCceEEEEEEEeCC
Q 019310 94 KGLFYALDLGGTNFRVLRVQLGG 116 (343)
Q Consensus 94 ~G~fLaIDlGGTNlRv~lV~l~g 116 (343)
...++.+|+||.++-+.++++.+
T Consensus 192 ~~~vlV~D~GgGT~Dvsv~~~~~ 214 (554)
T 1yuw_A 192 ERNVLIFDLGGGTFDVSILTIAA 214 (554)
T ss_dssp CEEEEEEEECSSCEEEEEEEEET
T ss_pred CcEEEEEEcCCCeEEEEEEEEcC
Confidence 34699999999999999999853
No 102
>3uoe_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.31A {Sinorhizobium meliloti}
Probab=23.61 E-value=57 Score=31.28 Aligned_cols=58 Identities=28% Similarity=0.239 Sum_probs=47.5
Q ss_pred chHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCc
Q 019310 32 GRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92 (343)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lP~G~ 92 (343)
-...++++++++.-....++.+.-+.+++.+.+-=..|..+++ +.+||.|+..+-.|.
T Consensus 26 v~~~~l~~~~~~~l~~~G~~~~~A~~vA~~Lv~Adl~G~~SHG---v~Rlp~Y~~~l~~G~ 83 (357)
T 3uoe_A 26 LPPARLRNLSVALLEKRGVPADSARLQANLLLEAELRGLPSHG---LQRLPLLLSRLDKGL 83 (357)
T ss_dssp ECHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCGGGT---GGGHHHHHHHHHTTS
T ss_pred EcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcccC---HHHHHHHHHHHHcCC
Confidence 3566788888888888899999999999999987777777653 789999998766664
No 103
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=23.59 E-value=45 Score=30.57 Aligned_cols=16 Identities=31% Similarity=0.281 Sum_probs=0.0
Q ss_pred cEEEEeeCCceEEEEE
Q 019310 96 LFYALDLGGTNFRVLR 111 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~l 111 (343)
..++||+|.||.+++.
T Consensus 4 ~~igIDlGT~~s~v~~ 19 (344)
T 1jce_A 4 KDIGIDLGTANTLVFL 19 (344)
T ss_dssp CEEEEEECSSEEEEEE
T ss_pred ceEEEEcCcCcEEEEE
No 104
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=23.51 E-value=41 Score=34.13 Aligned_cols=19 Identities=37% Similarity=0.455 Sum_probs=0.0
Q ss_pred ccEEEEeeCCceEEEEEEE
Q 019310 95 GLFYALDLGGTNFRVLRVQ 113 (343)
Q Consensus 95 G~fLaIDlGGTNlRv~lV~ 113 (343)
+..+|||||-||..|++++
T Consensus 2 ~~viGIDlGTt~s~va~~~ 20 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp --CEEEECCSSEEEEEEEE
T ss_pred CCEEEEEcCCcCEEEEEEE
No 105
>1owf_A IHF-alpha, integration HOST factor alpha-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ihf_A 1ouz_A 1owg_A 2ht0_A
Probab=23.39 E-value=1.1e+02 Score=23.13 Aligned_cols=36 Identities=11% Similarity=0.189 Sum_probs=31.0
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 019310 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (343)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (343)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 6 ~eli~~ia~~~~ls~~~~~~vl~~~~~~i~~~L~~G 41 (99)
T 1owf_A 6 AEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENG 41 (99)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 466777777778999999999999999999999763
No 106
>1nh2_D Transcription initiation factor IIA small chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: a.32.1.1 b.56.1.1 PDB: 1ytf_D* 1rm1_B
Probab=23.34 E-value=1.3e+02 Score=24.31 Aligned_cols=38 Identities=11% Similarity=0.058 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 019310 36 RAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (343)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (343)
.+.+.|+++.+.-.++++.-.+|...|-.-|.+.|+.+
T Consensus 17 aL~dtLdEli~~~~Isp~la~kVL~~FDksi~~aL~~~ 54 (121)
T 1nh2_D 17 SLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDN 54 (121)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999999999999999999999864
No 107
>1rfm_A L-sulfolactate dehydrogenase; methanogens, coenzyme M, hyperthermostable, Pro-S hydrogen transfer; HET: NAD; 2.50A {Methanocaldococcus jannaschii} PDB: 2x06_A*
Probab=23.30 E-value=51 Score=31.40 Aligned_cols=57 Identities=19% Similarity=0.325 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCc
Q 019310 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92 (343)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lP~G~ 92 (343)
...++++++.+.-....++.+.-+.+++.+.+-=..|..+|+ +.+||.|+..+-.|.
T Consensus 4 ~~~~l~~~~~~~l~~~G~~~~~A~~vA~~Lv~adl~G~~SHG---v~rlp~Y~~~l~~G~ 60 (344)
T 1rfm_A 4 KPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHG---IGRFPQYITALKLGN 60 (344)
T ss_dssp CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCGGGS---GGGHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcccC---HHHHHHHHHHHHcCC
Confidence 345678888887788889999999999999987778887754 789999997655553
No 108
>1xrh_A Ureidoglycolate dehydrogenase; structural genomics, protein structure initiative, NYSGXRC, ALLD, GLXB8, B0517, PSI; 2.25A {Escherichia coli} SCOP: c.122.1.1
Probab=22.77 E-value=63 Score=30.83 Aligned_cols=57 Identities=14% Similarity=0.204 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCc
Q 019310 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92 (343)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lP~G~ 92 (343)
...++++++.+.-....++.+.-+.+++.+.+-=..|..+|+ +.+||.|+..+-.|.
T Consensus 6 ~~~~l~~~~~~~l~~~G~~~~~A~~vA~~Lv~adl~G~~SHG---v~rlp~Y~~~l~~G~ 62 (351)
T 1xrh_A 6 SRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHG---AVRVEYYAERISKGG 62 (351)
T ss_dssp CHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTCGGGT---GGGHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCccccC---HHHHHHHHHHHHcCC
Confidence 345677788887778889999999999999987777887654 789999998766664
No 109
>2x06_A L-sulfolactate dehydrogenase; oxidoreductase, hyperthermostable, coenzyme M, methanogens, coenzyme M biosynthesis; HET: NAD; 2.50A {Methanocaldococcus jannaschii}
Probab=22.54 E-value=54 Score=31.22 Aligned_cols=56 Identities=20% Similarity=0.315 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCc
Q 019310 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92 (343)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lP~G~ 92 (343)
.+++++++.+.-....++.+.-+.+++.+.+-=..|..+|+ +.+||.|+..+-.|.
T Consensus 5 ~e~~~~~~~~il~~~G~~~~~A~~vA~~lv~adl~G~~SHG---v~rl~~Y~~~l~~G~ 60 (344)
T 2x06_A 5 PENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHG---IGRFPQYITALKLGN 60 (344)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCGGGT---GGGHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcccC---HHHHHHHHHHHHcCC
Confidence 45677788887778889999999999999887777777654 789999998655554
No 110
>1wtj_A Ureidoglycolate dehydrogenase; NADPH dependent enzyme, oxidoreductase; 1.55A {Pseudomonas syringae PV} PDB: 2cwf_A* 2cwh_A*
Probab=22.50 E-value=62 Score=30.80 Aligned_cols=59 Identities=17% Similarity=0.235 Sum_probs=47.7
Q ss_pred chHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCcc
Q 019310 32 GRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDE 93 (343)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lP~G~E 93 (343)
-...++++++.+.-....++.+.-+.+++.+.+-=..|..+|+ +.+||.|+..+-.|.-
T Consensus 13 v~~~~l~~~~~~~l~~~G~~~~~A~~vA~~Lv~adl~G~~SHG---v~rlp~Y~~~l~~G~i 71 (343)
T 1wtj_A 13 VSYPQLIDLLRRIFVVHGTSPEVADVLAENCASAQRDGSHSHG---IFRIPGYLSSLASGWV 71 (343)
T ss_dssp ECHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCGGGT---GGGHHHHHHHHHTTSS
T ss_pred ecHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcccc---HHHHHHHHHHHHcCCC
Confidence 3556788888888888899999999999999987777877654 7899999987666643
No 111
>4h8a_A Ureidoglycolate dehydrogenase; rossmann fold, oxidoreductase; HET: NAI; 1.64A {Escherichia coli} PDB: 4fju_A* 4fjs_A* 1xrh_A
Probab=21.61 E-value=54 Score=31.17 Aligned_cols=57 Identities=14% Similarity=0.204 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCc
Q 019310 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92 (343)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lP~G~ 92 (343)
...++++++++.-....++.+.-+.+++.+.+-=..|..+|+ +.+||.|+..+-.|.
T Consensus 6 ~~~~l~~~~~~~l~~~G~~~~~A~~vA~~Lv~adl~G~~SHG---v~rlp~Y~~~l~~G~ 62 (339)
T 4h8a_A 6 SRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHG---AVRVEYYAERISKGG 62 (339)
T ss_dssp CHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCGGGT---GGGHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcccc---HHHHHHHHHHHHcCC
Confidence 455678888887778889999999999999987778887754 789999998655554
No 112
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=21.43 E-value=3e+02 Score=26.84 Aligned_cols=23 Identities=35% Similarity=0.586 Sum_probs=19.9
Q ss_pred cccEEEEeeCCceEEEEEEEeCC
Q 019310 94 KGLFYALDLGGTNFRVLRVQLGG 116 (343)
Q Consensus 94 ~G~fLaIDlGGTNlRv~lV~l~g 116 (343)
...++.+|+||.++-+.++++.+
T Consensus 160 ~~~vlV~D~GgGT~Dvsv~~~~~ 182 (509)
T 2v7y_A 160 DQTILVYDLGGGTFDVSILELGD 182 (509)
T ss_dssp SEEEEEEEECSSCEEEEEEEEET
T ss_pred CCEEEEEECCCCeEEEEEEEEcC
Confidence 45799999999999999999853
No 113
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=20.60 E-value=61 Score=29.68 Aligned_cols=81 Identities=15% Similarity=0.192 Sum_probs=42.5
Q ss_pred CCcEEEEEEccccceeEEcccCcCCCCCCCCCCCCcEEE---EecCCCc--CCCCCCCChhhHhHhccCCCCCcccceee
Q 019310 243 KDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVI---NMEWGNF--RSSHLPLTEYDEALDTESLNPGEQVAILM 317 (343)
Q Consensus 243 ~~~~iglIlGTGtNa~y~e~~~~I~k~~~~~~e~~~miI---NtEwG~f--~~~~lp~T~~D~~lD~~s~nPG~q~fEKm 317 (343)
....+=+=+||=+...++.....+- |-+|. ++=.-++ +...||.-+........+.-+|+..-|-|
T Consensus 137 ~~~~iVVD~GTAtT~D~V~~~G~~l---------GG~I~PGi~l~~~AL~~~TA~Lp~v~~~~~~~~~~~~iG~nT~~ai 207 (271)
T 2f9w_A 137 KKACLVIDLGTAVTSDLVAADGVHL---------GGYICPGMTLMRSQLRTHTRRIRYDDAEARRALASLQPGQATAEAV 207 (271)
T ss_dssp SSCEEEEEESSEEEEEEECTTSBEE---------EEEEEECHHHHHHHHHHHSSSCCCCHHHHHHHTTCCSCBSSHHHHH
T ss_pred CCCEEEEEcCCceEEEEECCCCeEE---------EEEECCCHHHHHHHHHHhhhcCCCccccccccCccCCCCCCHHHHH
Confidence 4556667778888888885321110 00110 0000011 11247766543222333444699999999
Q ss_pred cccch--hHHhhhhhcc
Q 019310 318 CQFHV--TIAYIDSFID 332 (343)
Q Consensus 318 iSG~~--~~~~~~~~~~ 332 (343)
-||.+ ....||.+++
T Consensus 208 ~sGi~~g~~g~Ie~~i~ 224 (271)
T 2f9w_A 208 ERGCLLMLRGFVREQYA 224 (271)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99984 4555666654
No 114
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=20.43 E-value=36 Score=28.69 Aligned_cols=61 Identities=13% Similarity=0.147 Sum_probs=38.9
Q ss_pred CCCCCCcHHHHHHHHHHHcCCCce-EEEEEec------hHHHHhcccccCCCcEEEEEEccccceeEEc
Q 019310 200 EDTVGEDVVGELTKAMERIGLDMR-VAALVND------TIGTLAGGRYHNKDAIAAVILGTGTNAAYVE 261 (343)
Q Consensus 200 ~~~~G~dv~~lL~~al~r~~l~v~-vvaIvND------Tvatlla~~y~~~~~~iglIlGTGtNa~y~e 261 (343)
+|--|.++++.|.+.|+++|..|. +-.--.| -.+..++.+.. ....-=+|+|||.+.+..-
T Consensus 14 sDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~-~~d~GIliCGTGiG~siaA 81 (148)
T 4em8_A 14 SDHAGVELRLFLSAYLRDLGCEVFDCGCDPKEHSVDYPDYVHDVVREVS-DTSFGVLICGTGIGMSIAA 81 (148)
T ss_dssp ECGGGHHHHHHHHHHHHHTTCEEEECCCCTTCSCCCGGGGTHHHHTTCB-TTBEEEEEESSSHHHHHHH
T ss_pred ECchhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCChHHHHHHHHHHHH-HhCeEEEEccCcHHHHHHH
Confidence 345578899999999998886532 1111133 23444444445 4555667999999988764
No 115
>2g8y_A Malate/L-lactate dehydrogenases; NAD, E.coli, structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: NAD 1PE; 2.15A {Escherichia coli}
Probab=20.20 E-value=74 Score=30.79 Aligned_cols=57 Identities=23% Similarity=0.309 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCc
Q 019310 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92 (343)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lP~G~ 92 (343)
...++++++.+.-....++.+.-+.+++.+.+-=..|..+++ +.+||.|+..+-.|.
T Consensus 30 ~~~el~~~~~~~l~~~G~~~~~A~~vA~~Lv~Adl~G~~SHG---v~rlp~Y~~~l~~G~ 86 (385)
T 2g8y_A 30 DAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAGHDSHG---IGMFPSYVRSWSQGH 86 (385)
T ss_dssp CHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCGGGT---GGGHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcccc---HHHHHHHHHHHHcCC
Confidence 556788888887788889999999999999988788887754 789999997766664
No 116
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=20.01 E-value=1.2e+02 Score=26.71 Aligned_cols=48 Identities=19% Similarity=0.402 Sum_probs=32.3
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEEeeEEeecCCCcccCCchHHHHHHHHHHH
Q 019310 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALA 152 (343)
Q Consensus 96 ~fLaIDlGGTNlRv~lV~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~I~ 152 (343)
.+..+|+||....+.++.-+|. .. .+.+-.+.. ....++||.+|..+.
T Consensus 94 ~~~vl~lgG~~~~~~~~~~~g~---~~-----~~~~~~~~~-~g~G~f~d~~a~~l~ 141 (276)
T 4ehu_A 94 TRTIIDIGGQDAKVLKLDNNGR---LL-----NFLMNDKCA-AGTGRFLDVMAKIIE 141 (276)
T ss_dssp CCEEEEECSSCEEEEEECTTSC---EE-----EEEEECSCS-TTSHHHHHHHHHHHT
T ss_pred CCeEEEEcCCCceEEEEEecCc---eE-----EEEeCCCcC-cchhhHHHHHHHHhc
Confidence 5688999999999988854443 11 223333333 456789999998763
Done!