Query 019314
Match_columns 343
No_of_seqs 302 out of 1423
Neff 11.4
Searched_HMMs 46136
Date Fri Mar 29 08:27:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019314.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019314hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 4.2E-36 9.1E-41 250.5 20.3 268 35-337 11-293 (294)
2 PRK03592 haloalkane dehalogena 100.0 1.3E-35 2.9E-40 247.6 20.5 277 35-341 10-292 (295)
3 PRK00870 haloalkane dehalogena 100.0 1E-35 2.2E-40 248.9 19.6 275 22-338 9-301 (302)
4 TIGR02240 PHA_depoly_arom poly 100.0 2.4E-35 5.2E-40 243.5 20.2 262 35-340 5-268 (276)
5 KOG4178 Soluble epoxide hydrol 100.0 7E-35 1.5E-39 230.8 19.6 283 28-338 18-320 (322)
6 PLN02679 hydrolase, alpha/beta 100.0 2E-34 4.3E-39 245.5 20.5 276 36-339 65-358 (360)
7 PLN02965 Probable pheophorbida 100.0 5.4E-34 1.2E-38 232.6 19.9 245 56-339 4-254 (255)
8 PRK03204 haloalkane dehalogena 100.0 9.9E-34 2.1E-38 234.2 21.0 264 34-336 16-286 (286)
9 TIGR03056 bchO_mg_che_rel puta 100.0 1.2E-32 2.5E-37 228.4 22.9 266 35-336 9-278 (278)
10 TIGR03343 biphenyl_bphD 2-hydr 100.0 5.5E-33 1.2E-37 230.7 20.6 255 41-336 19-281 (282)
11 PRK10349 carboxylesterase BioH 100.0 5.3E-33 1.1E-37 227.3 19.9 252 43-337 3-255 (256)
12 PLN02385 hydrolase; alpha/beta 100.0 7.9E-33 1.7E-37 235.5 20.4 266 35-339 65-346 (349)
13 PRK10673 acyl-CoA esterase; Pr 100.0 1.6E-32 3.6E-37 224.5 20.8 249 44-337 3-254 (255)
14 PLN02578 hydrolase 100.0 1.1E-32 2.3E-37 234.7 20.3 275 37-336 71-353 (354)
15 PLN03087 BODYGUARD 1 domain co 100.0 1.1E-32 2.4E-37 237.5 20.4 280 35-338 179-479 (481)
16 PLN03084 alpha/beta hydrolase 100.0 4.2E-32 9.1E-37 229.8 23.5 269 36-337 109-383 (383)
17 PRK06489 hypothetical protein; 100.0 7.3E-33 1.6E-37 236.4 18.8 276 38-338 46-357 (360)
18 PRK10749 lysophospholipase L2; 100.0 8.3E-32 1.8E-36 227.2 23.2 272 34-338 33-329 (330)
19 PRK08775 homoserine O-acetyltr 100.0 2.4E-32 5.2E-37 231.9 18.6 274 35-340 39-341 (343)
20 TIGR03611 RutD pyrimidine util 100.0 9.4E-32 2E-36 220.4 19.8 251 44-336 1-256 (257)
21 PHA02857 monoglyceride lipase; 100.0 1.3E-31 2.7E-36 221.6 19.2 258 35-338 4-273 (276)
22 TIGR02427 protocat_pcaD 3-oxoa 100.0 3.8E-31 8.3E-36 215.8 20.3 248 44-336 2-251 (251)
23 PRK07581 hypothetical protein; 100.0 1.5E-31 3.2E-36 227.2 18.1 281 38-338 22-336 (339)
24 KOG1454 Predicted hydrolase/ac 100.0 3.7E-31 7.9E-36 219.2 18.3 270 43-338 38-324 (326)
25 PLN02298 hydrolase, alpha/beta 100.0 1.2E-30 2.6E-35 220.9 20.4 266 34-338 35-317 (330)
26 PRK11126 2-succinyl-6-hydroxy- 100.0 6.1E-31 1.3E-35 213.5 17.9 237 55-337 2-241 (242)
27 TIGR01250 pro_imino_pep_2 prol 100.0 5.1E-30 1.1E-34 213.6 23.8 265 36-336 6-288 (288)
28 TIGR01392 homoserO_Ac_trn homo 100.0 8E-31 1.7E-35 223.3 18.3 285 38-336 12-351 (351)
29 PLN02211 methyl indole-3-aceta 100.0 5.7E-30 1.2E-34 209.7 22.2 261 39-337 4-269 (273)
30 PRK00175 metX homoserine O-ace 100.0 1.1E-30 2.5E-35 223.8 18.7 291 38-339 29-375 (379)
31 TIGR01738 bioH putative pimelo 100.0 2.8E-30 6.1E-35 209.9 17.9 240 55-335 4-245 (245)
32 PF12697 Abhydrolase_6: Alpha/ 100.0 4.1E-29 8.9E-34 200.6 18.0 223 58-330 1-228 (228)
33 KOG4409 Predicted hydrolase/ac 100.0 6.5E-29 1.4E-33 197.5 18.6 104 52-164 87-195 (365)
34 PLN02894 hydrolase, alpha/beta 100.0 1.1E-28 2.4E-33 212.2 20.8 267 43-338 93-385 (402)
35 TIGR01249 pro_imino_pep_1 prol 100.0 8.1E-29 1.8E-33 207.2 19.4 120 35-164 8-130 (306)
36 COG2267 PldB Lysophospholipase 100.0 1.9E-28 4.1E-33 201.2 20.9 267 34-340 12-296 (298)
37 TIGR03695 menH_SHCHC 2-succiny 100.0 3E-28 6.6E-33 198.5 20.2 245 55-336 1-251 (251)
38 PLN02652 hydrolase; alpha/beta 100.0 2E-28 4.4E-33 208.8 19.5 259 36-338 115-387 (395)
39 KOG2984 Predicted hydrolase [G 100.0 5.9E-29 1.3E-33 181.1 13.6 247 35-338 24-276 (277)
40 PRK14875 acetoin dehydrogenase 100.0 5.9E-28 1.3E-32 208.4 20.7 255 37-337 114-370 (371)
41 PLN02980 2-oxoglutarate decarb 100.0 1.5E-27 3.2E-32 234.6 22.7 259 44-340 1360-1641(1655)
42 KOG1455 Lysophospholipase [Lip 100.0 3.2E-27 7E-32 184.3 17.6 264 34-338 30-312 (313)
43 PRK05855 short chain dehydroge 100.0 6.3E-27 1.4E-31 214.0 21.4 277 35-339 6-293 (582)
44 PLN02511 hydrolase 100.0 1.6E-26 3.5E-31 198.2 22.2 272 34-338 74-365 (388)
45 PRK06765 homoserine O-acetyltr 99.9 5.9E-26 1.3E-30 192.9 19.9 288 39-337 38-387 (389)
46 TIGR01607 PST-A Plasmodium sub 99.9 4.4E-26 9.5E-31 191.7 17.8 267 36-336 2-331 (332)
47 COG1647 Esterase/lipase [Gener 99.9 7.9E-26 1.7E-30 167.9 15.0 221 55-337 15-243 (243)
48 KOG2382 Predicted alpha/beta h 99.9 2.7E-25 5.9E-30 176.7 17.8 254 53-338 50-313 (315)
49 PRK10985 putative hydrolase; P 99.9 9.2E-24 2E-28 177.7 20.6 269 34-338 34-320 (324)
50 PRK05077 frsA fermentation/res 99.9 2.5E-23 5.5E-28 179.1 22.7 230 38-338 175-412 (414)
51 TIGR03100 hydr1_PEP hydrolase, 99.9 3.1E-23 6.7E-28 170.2 21.0 234 54-336 25-273 (274)
52 PF00561 Abhydrolase_1: alpha/ 99.9 2.3E-24 4.9E-29 173.6 10.1 218 90-332 1-229 (230)
53 PRK13604 luxD acyl transferase 99.9 6.9E-23 1.5E-27 165.0 17.0 224 35-323 13-248 (307)
54 PLN02872 triacylglycerol lipas 99.9 2.3E-22 5E-27 170.9 18.2 123 34-165 47-198 (395)
55 TIGR01838 PHA_synth_I poly(R)- 99.9 6.8E-23 1.5E-27 178.8 15.4 262 54-323 187-459 (532)
56 PRK11071 esterase YqiA; Provis 99.9 2.9E-22 6.2E-27 154.5 16.4 186 56-336 2-189 (190)
57 TIGR01836 PHA_synth_III_C poly 99.9 3.4E-22 7.3E-27 170.2 15.3 108 54-166 61-173 (350)
58 PRK10566 esterase; Provisional 99.9 2.4E-21 5.2E-26 157.8 17.6 211 44-337 15-247 (249)
59 KOG2564 Predicted acetyltransf 99.9 3.7E-22 8E-27 153.3 10.1 119 38-163 54-181 (343)
60 KOG1552 Predicted alpha/beta h 99.9 1.1E-20 2.3E-25 145.2 16.5 208 35-338 39-252 (258)
61 KOG4667 Predicted esterase [Li 99.9 1E-20 2.2E-25 139.8 15.1 219 55-336 33-256 (269)
62 COG0596 MhpC Predicted hydrola 99.9 1.8E-19 3.9E-24 148.2 21.8 267 38-336 6-280 (282)
63 PF12695 Abhydrolase_5: Alpha/ 99.8 1.8E-20 4E-25 139.4 11.8 144 57-319 1-145 (145)
64 PRK07868 acyl-CoA synthetase; 99.8 1.5E-19 3.2E-24 172.9 19.4 261 54-338 66-361 (994)
65 COG2021 MET2 Homoserine acetyl 99.8 2E-19 4.4E-24 145.4 17.1 289 38-337 32-367 (368)
66 KOG4391 Predicted alpha/beta h 99.8 1.2E-19 2.5E-24 134.4 12.6 219 34-339 57-283 (300)
67 TIGR03101 hydr2_PEP hydrolase, 99.8 1.4E-18 3.1E-23 139.6 14.6 106 55-164 25-134 (266)
68 COG0429 Predicted hydrolase of 99.8 5.7E-18 1.2E-22 134.8 16.7 267 35-338 53-340 (345)
69 PRK11460 putative hydrolase; P 99.8 6E-18 1.3E-22 135.1 16.1 172 53-336 14-210 (232)
70 TIGR02821 fghA_ester_D S-formy 99.8 3.1E-17 6.7E-22 134.9 20.3 121 37-164 20-173 (275)
71 PF06342 DUF1057: Alpha/beta h 99.8 8.6E-17 1.9E-21 125.4 20.1 111 45-164 24-137 (297)
72 COG3208 GrsT Predicted thioest 99.8 4.9E-17 1.1E-21 124.4 17.8 222 54-336 6-234 (244)
73 PLN02442 S-formylglutathione h 99.8 9.3E-17 2E-21 132.2 18.8 122 37-164 25-178 (283)
74 PF03096 Ndr: Ndr family; Int 99.8 2.9E-16 6.2E-21 124.3 19.5 268 36-339 3-280 (283)
75 KOG2931 Differentiation-relate 99.7 2.8E-15 6E-20 116.8 24.0 267 35-338 25-306 (326)
76 KOG1838 Alpha/beta hydrolase [ 99.7 8.8E-16 1.9E-20 127.0 21.1 250 34-323 96-367 (409)
77 COG1506 DAP2 Dipeptidyl aminop 99.7 5.5E-17 1.2E-21 147.3 15.5 227 34-338 368-616 (620)
78 PF00326 Peptidase_S9: Prolyl 99.7 1.4E-16 3E-21 126.4 14.8 183 82-338 8-209 (213)
79 TIGR01839 PHA_synth_II poly(R) 99.7 1.3E-16 2.7E-21 138.2 14.8 111 53-168 213-332 (560)
80 TIGR01840 esterase_phb esteras 99.7 5.4E-16 1.2E-20 122.6 15.4 104 54-163 12-129 (212)
81 PLN00021 chlorophyllase 99.7 1.9E-15 4.2E-20 125.0 17.4 100 54-163 51-165 (313)
82 TIGR03230 lipo_lipase lipoprot 99.7 5.3E-16 1.1E-20 132.1 12.4 107 53-166 39-156 (442)
83 PF06500 DUF1100: Alpha/beta h 99.6 8.1E-15 1.8E-19 122.3 16.2 230 39-337 172-408 (411)
84 PF01738 DLH: Dienelactone hyd 99.6 1.5E-14 3.3E-19 115.0 16.0 160 54-323 13-193 (218)
85 PRK10162 acetyl esterase; Prov 99.6 6.4E-14 1.4E-18 117.4 19.7 115 43-165 68-196 (318)
86 COG2945 Predicted hydrolase of 99.6 5.1E-14 1.1E-18 103.1 16.0 176 53-336 26-205 (210)
87 TIGR01849 PHB_depoly_PhaZ poly 99.6 4.8E-14 1E-18 118.9 17.7 103 56-167 103-211 (406)
88 PF02230 Abhydrolase_2: Phosph 99.6 7.8E-15 1.7E-19 116.3 12.3 106 52-163 11-139 (216)
89 cd00707 Pancreat_lipase_like P 99.6 2.4E-15 5.2E-20 122.8 9.6 118 41-166 24-149 (275)
90 PF06821 Ser_hydrolase: Serine 99.6 6.3E-15 1.4E-19 110.8 10.3 156 58-323 1-157 (171)
91 TIGR00976 /NonD putative hydro 99.6 8.6E-14 1.9E-18 125.5 18.4 122 38-165 3-133 (550)
92 PF05448 AXE1: Acetyl xylan es 99.6 2.8E-13 6.1E-18 112.3 18.7 211 54-337 82-319 (320)
93 PF00975 Thioesterase: Thioest 99.6 1.9E-13 4.2E-18 109.8 16.8 100 56-163 1-103 (229)
94 PF12146 Hydrolase_4: Putative 99.5 2.3E-14 4.9E-19 92.5 6.9 76 41-123 1-79 (79)
95 COG3458 Acetyl esterase (deace 99.5 8.2E-13 1.8E-17 102.0 14.5 224 35-338 60-317 (321)
96 COG3243 PhaC Poly(3-hydroxyalk 99.5 3.5E-13 7.6E-18 111.0 13.3 110 54-168 106-221 (445)
97 COG0400 Predicted esterase [Ge 99.5 3E-13 6.4E-18 104.0 12.2 108 49-164 12-134 (207)
98 COG0412 Dienelactone hydrolase 99.5 2.3E-12 5.1E-17 102.5 17.7 156 56-322 28-205 (236)
99 PF10230 DUF2305: Uncharacteri 99.5 4E-12 8.6E-17 103.3 18.8 105 55-165 2-123 (266)
100 PF05728 UPF0227: Uncharacteri 99.5 4.2E-12 9.2E-17 96.5 16.6 89 58-165 2-92 (187)
101 TIGR03502 lipase_Pla1_cef extr 99.5 4.2E-13 9E-18 121.6 11.5 109 34-149 420-575 (792)
102 PRK10115 protease 2; Provision 99.5 3.8E-12 8.3E-17 116.8 17.6 126 34-165 419-560 (686)
103 PF08538 DUF1749: Protein of u 99.5 1.4E-12 3E-17 104.6 12.7 102 54-166 32-150 (303)
104 COG4757 Predicted alpha/beta h 99.5 7.1E-13 1.5E-17 99.9 10.2 120 35-163 9-137 (281)
105 KOG2624 Triglyceride lipase-ch 99.4 9.7E-12 2.1E-16 104.9 15.7 129 34-164 51-199 (403)
106 PF07859 Abhydrolase_3: alpha/ 99.4 8.4E-12 1.8E-16 98.9 13.7 98 58-165 1-111 (211)
107 PRK10252 entF enterobactin syn 99.4 1.6E-11 3.4E-16 122.8 17.9 100 55-163 1068-1170(1296)
108 PF02273 Acyl_transf_2: Acyl t 99.4 1.2E-10 2.7E-15 88.8 17.6 224 36-324 7-242 (294)
109 KOG2565 Predicted hydrolases o 99.4 3.4E-12 7.3E-17 102.9 9.7 120 35-161 127-261 (469)
110 COG3545 Predicted esterase of 99.3 7.1E-11 1.5E-15 85.8 14.3 172 56-337 3-178 (181)
111 PF02129 Peptidase_S15: X-Pro 99.3 6.8E-12 1.5E-16 103.1 10.3 125 40-166 1-138 (272)
112 COG3571 Predicted hydrolase of 99.3 1.8E-10 3.9E-15 81.8 15.4 103 54-162 13-122 (213)
113 PTZ00472 serine carboxypeptida 99.3 9.8E-11 2.1E-15 102.5 15.8 117 41-165 60-217 (462)
114 PF09752 DUF2048: Uncharacteri 99.3 3.6E-10 7.7E-15 92.3 17.8 235 53-336 90-347 (348)
115 PRK05371 x-prolyl-dipeptidyl a 99.3 9.5E-11 2.1E-15 108.4 16.1 82 82-164 273-373 (767)
116 PF10503 Esterase_phd: Esteras 99.3 1.5E-10 3.2E-15 90.2 12.4 105 54-163 15-131 (220)
117 KOG4627 Kynurenine formamidase 99.3 7.9E-11 1.7E-15 87.3 10.2 191 43-323 55-251 (270)
118 PF03959 FSH1: Serine hydrolas 99.2 1.1E-10 2.3E-15 92.0 11.0 166 54-327 3-209 (212)
119 PF12740 Chlorophyllase2: Chlo 99.2 7.9E-10 1.7E-14 87.3 15.3 101 55-163 17-130 (259)
120 PF06028 DUF915: Alpha/beta hy 99.2 9.2E-10 2E-14 87.9 15.5 104 54-165 10-144 (255)
121 PF06057 VirJ: Bacterial virul 99.2 1.3E-10 2.8E-15 86.5 9.5 96 56-163 3-106 (192)
122 COG0657 Aes Esterase/lipase [L 99.2 7.5E-10 1.6E-14 93.1 15.3 107 54-165 78-192 (312)
123 KOG1515 Arylacetamide deacetyl 99.2 5E-09 1.1E-13 86.8 19.2 109 53-165 88-208 (336)
124 COG3319 Thioesterase domains o 99.2 2.8E-09 6E-14 84.8 16.3 100 56-164 1-103 (257)
125 PF07819 PGAP1: PGAP1-like pro 99.2 3.8E-10 8.3E-15 89.2 10.7 101 54-163 3-122 (225)
126 KOG3975 Uncharacterized conser 99.1 1.4E-08 3E-13 77.9 16.9 107 52-164 26-147 (301)
127 KOG3043 Predicted hydrolase re 99.1 1.1E-09 2.3E-14 82.8 9.5 161 49-321 33-211 (242)
128 COG4099 Predicted peptidase [G 99.1 2.5E-09 5.4E-14 84.1 11.8 116 39-163 169-303 (387)
129 KOG2100 Dipeptidyl aminopeptid 99.1 4.3E-09 9.3E-14 97.3 15.4 216 38-338 504-747 (755)
130 KOG2551 Phospholipase/carboxyh 99.1 9E-09 1.9E-13 77.9 13.9 62 275-337 159-223 (230)
131 PF07224 Chlorophyllase: Chlor 99.0 4E-09 8.6E-14 81.7 11.1 98 55-163 46-156 (307)
132 PF11339 DUF3141: Protein of u 99.0 1.7E-08 3.7E-13 85.9 15.8 75 89-168 100-179 (581)
133 PF03403 PAF-AH_p_II: Platelet 99.0 4E-09 8.6E-14 90.0 12.1 101 54-163 99-261 (379)
134 PF08840 BAAT_C: BAAT / Acyl-C 99.0 4.6E-10 9.9E-15 88.2 5.7 36 129-165 22-57 (213)
135 KOG2281 Dipeptidyl aminopeptid 99.0 1E-08 2.2E-13 88.9 13.8 225 36-337 618-866 (867)
136 smart00824 PKS_TE Thioesterase 99.0 2.1E-08 4.5E-13 79.4 14.8 94 60-163 2-101 (212)
137 KOG2112 Lysophospholipase [Lip 98.9 1.3E-08 2.9E-13 76.4 10.2 102 55-163 3-127 (206)
138 PRK04940 hypothetical protein; 98.9 5.1E-08 1.1E-12 72.7 13.1 34 129-165 60-93 (180)
139 PLN02733 phosphatidylcholine-s 98.9 7.7E-09 1.7E-13 89.3 9.8 85 76-164 110-201 (440)
140 PF00151 Lipase: Lipase; Inte 98.9 1.8E-09 3.8E-14 90.2 5.5 105 52-166 68-189 (331)
141 PF01674 Lipase_2: Lipase (cla 98.9 1.1E-08 2.3E-13 79.7 8.5 85 56-149 2-95 (219)
142 PF03583 LIP: Secretory lipase 98.9 9.4E-08 2E-12 78.9 13.8 60 279-338 219-285 (290)
143 COG4188 Predicted dienelactone 98.9 6.2E-09 1.4E-13 85.4 6.6 91 54-152 70-182 (365)
144 PF05677 DUF818: Chlamydia CHL 98.8 2E-06 4.2E-11 70.0 19.7 113 36-151 116-237 (365)
145 PF05990 DUF900: Alpha/beta hy 98.8 4.9E-08 1.1E-12 77.7 10.0 104 54-164 17-137 (233)
146 COG3509 LpqC Poly(3-hydroxybut 98.7 1.4E-07 3.1E-12 74.8 10.6 123 37-164 40-179 (312)
147 PF00450 Peptidase_S10: Serine 98.7 9.4E-07 2E-11 77.8 17.1 119 40-165 22-182 (415)
148 COG4814 Uncharacterized protei 98.7 2E-06 4.3E-11 66.6 15.5 104 55-165 45-177 (288)
149 PLN02606 palmitoyl-protein thi 98.7 1.6E-06 3.5E-11 70.0 15.3 100 55-164 26-132 (306)
150 PF12715 Abhydrolase_7: Abhydr 98.6 2.9E-07 6.3E-12 76.4 10.2 106 54-163 114-259 (390)
151 KOG1553 Predicted alpha/beta h 98.6 4.6E-07 1E-11 73.1 10.6 99 55-163 243-344 (517)
152 KOG3847 Phospholipase A2 (plat 98.6 4.2E-07 9.1E-12 72.4 9.7 115 40-163 99-274 (399)
153 KOG1551 Uncharacterized conser 98.5 4.5E-06 9.7E-11 65.0 12.8 57 282-339 309-367 (371)
154 COG2936 Predicted acyl esteras 98.5 4.7E-06 1E-10 73.2 13.9 130 34-165 22-160 (563)
155 PF08386 Abhydrolase_4: TAP-li 98.5 1.5E-06 3.3E-11 59.6 8.8 78 261-338 15-94 (103)
156 COG1075 LipA Predicted acetylt 98.5 5.7E-07 1.2E-11 75.9 8.0 100 55-163 59-163 (336)
157 PF05577 Peptidase_S28: Serine 98.4 2.8E-06 6.1E-11 74.9 11.9 108 54-165 28-149 (434)
158 PF10340 DUF2424: Protein of u 98.4 1.4E-05 3E-10 67.0 15.1 108 54-166 121-237 (374)
159 PF05705 DUF829: Eukaryotic pr 98.4 1.9E-05 4.2E-10 63.7 15.4 59 277-335 176-240 (240)
160 PF12048 DUF3530: Protein of u 98.4 5.1E-05 1.1E-09 63.2 18.0 112 47-163 79-228 (310)
161 PLN02633 palmitoyl protein thi 98.4 0.00011 2.3E-09 59.8 17.7 101 55-164 25-131 (314)
162 PLN02209 serine carboxypeptida 98.3 0.00021 4.6E-09 62.4 20.4 124 41-165 51-213 (437)
163 KOG3253 Predicted alpha/beta h 98.3 6E-06 1.3E-10 71.8 10.6 48 275-322 300-348 (784)
164 PLN03016 sinapoylglucose-malat 98.3 0.00011 2.4E-09 64.1 18.6 60 279-338 347-431 (433)
165 PF05057 DUF676: Putative seri 98.3 3.4E-06 7.5E-11 66.7 7.7 88 55-148 4-97 (217)
166 COG3150 Predicted esterase [Ge 98.3 6.9E-06 1.5E-10 59.4 8.0 90 58-164 2-91 (191)
167 PF00756 Esterase: Putative es 98.2 4.5E-06 9.8E-11 68.0 7.0 109 53-165 22-151 (251)
168 KOG4840 Predicted hydrolases o 98.2 2.8E-05 6E-10 59.1 10.4 105 55-165 36-145 (299)
169 PF02089 Palm_thioest: Palmito 98.2 2.8E-05 6E-10 62.5 10.7 103 54-164 4-116 (279)
170 PF04301 DUF452: Protein of un 98.2 3.5E-05 7.7E-10 59.6 10.8 79 55-164 11-90 (213)
171 KOG3101 Esterase D [General fu 98.2 2.6E-05 5.7E-10 58.8 9.6 106 55-165 44-177 (283)
172 COG4782 Uncharacterized protei 98.1 1.8E-05 3.9E-10 65.0 9.1 106 53-165 114-235 (377)
173 KOG3724 Negative regulator of 98.1 2.1E-05 4.5E-10 70.6 10.0 103 53-163 87-219 (973)
174 PF02450 LCAT: Lecithin:choles 98.1 2.5E-05 5.5E-10 67.5 10.1 79 76-164 67-160 (389)
175 KOG1282 Serine carboxypeptidas 98.1 0.0011 2.3E-08 57.8 19.4 114 40-165 55-214 (454)
176 PRK10439 enterobactin/ferric e 98.0 5.7E-05 1.2E-09 65.6 10.8 104 54-163 208-322 (411)
177 cd00312 Esterase_lipase Estera 97.9 4.1E-05 8.8E-10 69.0 8.7 108 53-165 93-214 (493)
178 KOG2183 Prolylcarboxypeptidase 97.9 8.9E-05 1.9E-09 61.9 9.5 107 55-164 80-202 (492)
179 PLN02213 sinapoylglucose-malat 97.9 0.0017 3.8E-08 54.7 16.3 59 280-338 234-317 (319)
180 PF10142 PhoPQ_related: PhoPQ- 97.8 0.00035 7.6E-09 59.0 11.5 59 276-336 259-318 (367)
181 COG1073 Hydrolases of the alph 97.8 0.00075 1.6E-08 56.3 13.0 63 275-337 227-296 (299)
182 COG1505 Serine proteases of th 97.7 0.00035 7.7E-09 61.3 10.5 125 35-165 398-536 (648)
183 KOG2182 Hydrolytic enzymes of 97.6 0.0007 1.5E-08 58.2 10.6 111 53-165 84-208 (514)
184 COG0627 Predicted esterase [Ge 97.6 0.0004 8.7E-09 57.7 8.0 109 54-166 53-189 (316)
185 KOG2541 Palmitoyl protein thio 97.5 0.00062 1.3E-08 53.7 8.3 100 56-163 24-127 (296)
186 COG1770 PtrB Protease II [Amin 97.4 0.0085 1.8E-07 53.7 14.8 125 36-165 424-563 (682)
187 PF11144 DUF2920: Protein of u 97.4 0.002 4.2E-08 54.7 10.4 35 130-164 185-219 (403)
188 PF06259 Abhydrolase_8: Alpha/ 97.4 0.0087 1.9E-07 45.2 12.6 115 48-163 11-143 (177)
189 COG2382 Fes Enterochelin ester 97.4 0.004 8.6E-08 50.4 11.3 115 43-164 84-212 (299)
190 PF00135 COesterase: Carboxyle 97.3 0.0033 7.2E-08 57.4 11.7 108 55-165 125-246 (535)
191 cd00741 Lipase Lipase. Lipase 97.3 0.0011 2.3E-08 49.4 6.7 50 113-163 9-66 (153)
192 KOG3967 Uncharacterized conser 97.2 0.0047 1E-07 47.0 9.6 103 55-164 101-227 (297)
193 COG4553 DepA Poly-beta-hydroxy 97.2 0.022 4.7E-07 45.8 13.6 102 55-165 103-210 (415)
194 COG2272 PnbA Carboxylesterase 97.2 0.0032 7E-08 54.5 9.1 106 53-165 92-218 (491)
195 PLN02517 phosphatidylcholine-s 97.1 0.0013 2.8E-08 58.3 6.5 83 76-164 158-263 (642)
196 KOG2237 Predicted serine prote 97.1 0.0046 9.9E-08 55.0 9.7 106 54-165 469-585 (712)
197 PF01764 Lipase_3: Lipase (cla 97.1 0.0022 4.8E-08 46.9 6.5 38 113-151 49-86 (140)
198 KOG1202 Animal-type fatty acid 97.1 0.03 6.5E-07 53.8 14.7 97 52-165 2120-2220(2376)
199 KOG2369 Lecithin:cholesterol a 97.0 0.00076 1.6E-08 57.7 3.9 85 76-163 126-224 (473)
200 COG2819 Predicted hydrolase of 96.9 0.0021 4.6E-08 51.2 5.3 36 129-164 137-172 (264)
201 PF06441 EHN: Epoxide hydrolas 96.7 0.0047 1E-07 42.7 5.2 40 31-70 67-107 (112)
202 COG2939 Carboxypeptidase C (ca 96.6 0.011 2.5E-07 51.3 8.2 114 44-165 88-237 (498)
203 PF11288 DUF3089: Protein of u 96.6 0.0053 1.1E-07 47.4 5.5 41 110-150 76-116 (207)
204 COG4287 PqaA PhoPQ-activated p 96.6 0.022 4.8E-07 47.3 9.1 61 275-337 325-386 (507)
205 cd00519 Lipase_3 Lipase (class 96.5 0.0072 1.6E-07 48.4 5.9 35 129-163 128-167 (229)
206 PF05576 Peptidase_S37: PS-10 96.5 0.0051 1.1E-07 52.0 5.0 102 53-163 61-168 (448)
207 PF11187 DUF2974: Protein of u 96.4 0.01 2.2E-07 47.0 6.3 45 116-162 73-121 (224)
208 COG2830 Uncharacterized protei 96.4 0.0062 1.4E-07 44.1 4.5 76 57-163 13-89 (214)
209 COG4947 Uncharacterized protei 96.2 0.01 2.2E-07 43.6 4.7 115 41-165 14-137 (227)
210 PF07082 DUF1350: Protein of u 96.2 0.022 4.8E-07 45.0 6.7 100 55-162 17-123 (250)
211 COG3946 VirJ Type IV secretory 96.2 0.019 4.1E-07 48.4 6.6 86 55-152 260-349 (456)
212 PF01083 Cutinase: Cutinase; 96.1 0.025 5.4E-07 43.2 6.6 50 113-163 66-121 (179)
213 PLN02454 triacylglycerol lipas 95.7 0.027 5.9E-07 48.4 5.8 21 130-150 229-249 (414)
214 PLN02162 triacylglycerol lipas 95.6 0.037 8E-07 48.1 6.2 36 112-148 262-297 (475)
215 PLN00413 triacylglycerol lipas 95.6 0.042 9.1E-07 47.9 6.6 36 112-148 268-303 (479)
216 PF04083 Abhydro_lipase: Parti 95.5 0.033 7.1E-07 34.0 4.1 37 34-70 15-58 (63)
217 PLN02571 triacylglycerol lipas 95.4 0.025 5.4E-07 48.6 4.7 38 112-149 208-246 (413)
218 PF06850 PHB_depo_C: PHB de-po 95.1 0.04 8.7E-07 41.7 4.3 62 276-337 130-201 (202)
219 PLN02408 phospholipase A1 94.9 0.045 9.7E-07 46.4 4.6 38 114-151 184-222 (365)
220 PLN02310 triacylglycerol lipas 94.7 0.06 1.3E-06 46.2 4.9 37 113-149 190-229 (405)
221 PLN02934 triacylglycerol lipas 94.6 0.062 1.3E-06 47.3 5.0 37 112-149 305-341 (515)
222 KOG1516 Carboxylesterase and r 94.6 0.22 4.7E-06 45.8 8.9 107 55-166 112-234 (545)
223 KOG2521 Uncharacterized conser 94.5 1.5 3.4E-05 37.1 12.7 57 282-338 228-290 (350)
224 PF07519 Tannase: Tannase and 94.5 0.66 1.4E-05 41.6 11.2 76 89-166 59-152 (474)
225 PF05277 DUF726: Protein of un 94.3 0.18 3.9E-06 42.6 6.8 38 126-164 218-260 (345)
226 PLN03037 lipase class 3 family 94.0 0.094 2E-06 46.3 4.8 37 113-149 299-338 (525)
227 PLN02324 triacylglycerol lipas 94.0 0.086 1.9E-06 45.3 4.5 36 114-149 199-235 (415)
228 PLN02753 triacylglycerol lipas 93.8 0.11 2.5E-06 45.8 4.9 37 113-149 292-332 (531)
229 PLN02802 triacylglycerol lipas 93.7 0.12 2.6E-06 45.5 4.8 37 114-150 314-351 (509)
230 PLN02761 lipase class 3 family 93.2 0.15 3.3E-06 45.1 4.7 37 113-149 273-314 (527)
231 PLN02719 triacylglycerol lipas 93.2 0.16 3.4E-06 44.8 4.7 37 114-150 279-319 (518)
232 KOG4372 Predicted alpha/beta h 93.1 0.13 2.8E-06 43.8 4.0 83 55-147 80-168 (405)
233 PF08237 PE-PPE: PE-PPE domain 93.1 0.5 1.1E-05 37.5 7.1 62 89-150 2-69 (225)
234 TIGR03712 acc_sec_asp2 accesso 93.1 6.1 0.00013 35.0 15.2 116 38-164 272-390 (511)
235 KOG4569 Predicted lipase [Lipi 92.2 0.26 5.6E-06 42.0 4.7 37 112-149 155-191 (336)
236 PLN02847 triacylglycerol lipas 91.8 0.34 7.3E-06 43.7 5.1 21 129-149 251-271 (633)
237 KOG4388 Hormone-sensitive lipa 91.5 0.8 1.7E-05 41.0 6.9 102 55-164 396-508 (880)
238 KOG1283 Serine carboxypeptidas 90.1 2.3 5E-05 35.2 7.9 125 35-164 7-166 (414)
239 KOG2029 Uncharacterized conser 87.2 1.4 2.9E-05 39.8 5.2 40 110-149 505-546 (697)
240 KOG4540 Putative lipase essent 85.1 2.2 4.8E-05 34.7 5.0 34 128-163 275-308 (425)
241 COG5153 CVT17 Putative lipase 85.1 2.2 4.8E-05 34.7 5.0 34 128-163 275-308 (425)
242 PF09949 DUF2183: Uncharacteri 82.7 12 0.00025 25.4 7.1 77 82-159 17-97 (100)
243 PF03283 PAE: Pectinacetyleste 82.7 5.4 0.00012 34.4 6.8 46 118-163 144-194 (361)
244 PF07519 Tannase: Tannase and 81.9 2.5 5.4E-05 38.0 4.7 60 279-338 353-427 (474)
245 PF09994 DUF2235: Uncharacteri 76.0 33 0.00071 28.5 9.2 93 56-149 2-112 (277)
246 PRK12467 peptide synthase; Pro 74.9 13 0.00029 43.2 8.6 99 55-162 3692-3793(3956)
247 COG1448 TyrB Aspartate/tyrosin 73.0 26 0.00057 30.2 7.8 91 55-162 171-263 (396)
248 KOG2385 Uncharacterized conser 71.5 12 0.00027 33.4 5.7 38 126-164 445-487 (633)
249 PF00698 Acyl_transf_1: Acyl t 69.6 3.7 7.9E-05 34.8 2.3 29 118-147 74-102 (318)
250 PF05576 Peptidase_S37: PS-10 69.3 7.8 0.00017 33.7 4.1 53 282-336 354-412 (448)
251 COG0482 TrmU Predicted tRNA(5- 69.0 13 0.00028 31.7 5.3 66 55-134 4-69 (356)
252 smart00827 PKS_AT Acyl transfe 68.3 6 0.00013 33.1 3.4 30 118-148 72-101 (298)
253 cd07225 Pat_PNPLA6_PNPLA7 Pata 68.1 6 0.00013 33.3 3.3 33 117-150 32-64 (306)
254 PRK10279 hypothetical protein; 67.3 7.1 0.00015 32.7 3.5 33 118-151 23-55 (300)
255 TIGR03131 malonate_mdcH malona 65.7 7.2 0.00016 32.6 3.3 30 118-148 66-95 (295)
256 cd07198 Patatin Patatin-like p 65.0 7.1 0.00015 29.5 2.9 33 118-151 16-48 (172)
257 cd07207 Pat_ExoU_VipD_like Exo 63.5 8.4 0.00018 29.8 3.1 31 119-150 18-48 (194)
258 cd07227 Pat_Fungal_NTE1 Fungal 63.5 9.6 0.00021 31.4 3.5 31 118-149 28-58 (269)
259 cd07210 Pat_hypo_W_succinogene 61.4 11 0.00023 30.1 3.4 30 120-150 20-49 (221)
260 cd01714 ETF_beta The electron 61.0 35 0.00076 26.7 6.1 64 89-160 76-145 (202)
261 TIGR00128 fabD malonyl CoA-acy 60.4 9.6 0.00021 31.7 3.1 28 120-148 74-102 (290)
262 COG4822 CbiK Cobalamin biosynt 59.5 49 0.0011 26.0 6.3 62 54-134 137-199 (265)
263 COG1752 RssA Predicted esteras 59.2 10 0.00022 32.0 3.1 33 117-150 28-60 (306)
264 cd07230 Pat_TGL4-5_like Triacy 58.9 5.8 0.00013 35.0 1.6 38 118-156 91-128 (421)
265 PF00448 SRP54: SRP54-type pro 57.1 91 0.002 24.3 8.2 64 89-160 83-148 (196)
266 COG3673 Uncharacterized conser 56.8 1.2E+02 0.0027 25.7 9.2 103 53-162 29-151 (423)
267 cd07228 Pat_NTE_like_bacteria 56.3 15 0.00031 28.0 3.3 31 120-151 20-50 (175)
268 PRK06731 flhF flagellar biosyn 55.1 99 0.0021 25.6 8.0 64 89-160 154-219 (270)
269 cd07232 Pat_PLPL Patain-like p 54.4 8.1 0.00018 34.0 1.8 39 118-157 85-123 (407)
270 PF06792 UPF0261: Uncharacteri 53.7 1.6E+02 0.0034 26.0 10.0 78 82-160 21-126 (403)
271 cd07229 Pat_TGL3_like Triacylg 53.2 9.1 0.0002 33.3 1.8 40 118-158 101-140 (391)
272 PF10605 3HBOH: 3HB-oligomer h 53.0 14 0.0003 33.8 3.0 36 131-166 287-323 (690)
273 cd07209 Pat_hypo_Ecoli_Z1214_l 52.9 17 0.00036 28.8 3.2 33 118-151 16-48 (215)
274 cd07231 Pat_SDP1-like Sugar-De 52.4 9.2 0.0002 32.1 1.7 37 118-155 86-122 (323)
275 cd07205 Pat_PNPLA6_PNPLA7_NTE1 51.2 26 0.00056 26.5 3.9 29 120-149 20-48 (175)
276 PF11713 Peptidase_C80: Peptid 51.1 16 0.00034 27.3 2.6 49 93-141 57-116 (157)
277 COG0218 Predicted GTPase [Gene 50.6 30 0.00066 26.9 4.1 15 92-106 72-86 (200)
278 PF10686 DUF2493: Protein of u 50.0 31 0.00067 21.7 3.4 33 55-95 31-63 (71)
279 COG3933 Transcriptional antite 49.0 90 0.002 27.7 7.0 76 55-148 109-184 (470)
280 PF13207 AAA_17: AAA domain; P 48.7 19 0.00042 25.0 2.7 60 58-125 1-64 (121)
281 COG0529 CysC Adenylylsulfate k 48.6 37 0.00081 25.9 4.1 39 54-97 21-59 (197)
282 PF12242 Eno-Rase_NADH_b: NAD( 48.6 38 0.00083 21.6 3.5 23 129-151 40-62 (78)
283 TIGR02816 pfaB_fam PfaB family 47.2 20 0.00044 32.8 3.1 31 119-150 255-286 (538)
284 COG1073 Hydrolases of the alph 46.5 3.7 8E-05 33.9 -1.5 89 53-151 47-154 (299)
285 PRK00091 miaA tRNA delta(2)-is 46.0 85 0.0018 26.5 6.4 63 55-125 3-89 (307)
286 cd07212 Pat_PNPLA9 Patatin-lik 45.6 32 0.0007 29.1 4.0 19 132-150 35-53 (312)
287 PRK14974 cell division protein 45.5 1.4E+02 0.0029 25.8 7.6 65 88-160 221-287 (336)
288 PF00004 AAA: ATPase family as 44.7 51 0.0011 23.1 4.5 35 59-101 1-35 (132)
289 PRK05282 (alpha)-aspartyl dipe 44.7 1.1E+02 0.0024 24.7 6.6 82 55-144 31-127 (233)
290 cd07208 Pat_hypo_Ecoli_yjju_li 44.1 29 0.00063 28.5 3.4 32 120-152 18-50 (266)
291 KOG0781 Signal recognition par 43.8 1.2E+02 0.0025 27.5 6.9 88 59-160 442-538 (587)
292 PRK05579 bifunctional phosphop 43.3 2.4E+02 0.0051 25.0 10.2 77 55-136 116-196 (399)
293 PLN02748 tRNA dimethylallyltra 42.7 1.3E+02 0.0028 27.3 7.3 74 55-136 21-119 (468)
294 COG0541 Ffh Signal recognition 42.1 1.7E+02 0.0036 26.1 7.5 48 112-160 198-247 (451)
295 PF03054 tRNA_Me_trans: tRNA m 41.7 23 0.0005 30.5 2.5 51 82-134 17-68 (356)
296 KOG4287 Pectin acetylesterase 41.6 6.7 0.00014 33.0 -0.6 17 275-291 265-281 (402)
297 PF00326 Peptidase_S9: Prolyl 40.3 65 0.0014 25.2 4.8 66 54-124 143-208 (213)
298 PF01075 Glyco_transf_9: Glyco 39.8 33 0.00072 27.6 3.2 40 54-95 104-143 (247)
299 PRK10867 signal recognition pa 39.1 2.9E+02 0.0063 24.8 9.4 65 87-159 181-247 (433)
300 cd03146 GAT1_Peptidase_E Type 39.1 1.8E+02 0.0039 22.9 7.1 83 54-145 30-129 (212)
301 PRK14665 mnmA tRNA-specific 2- 39.1 96 0.0021 26.9 5.8 62 54-134 5-66 (360)
302 TIGR01425 SRP54_euk signal rec 38.8 1.6E+02 0.0034 26.4 7.1 64 89-160 182-247 (429)
303 PF14253 AbiH: Bacteriophage a 38.5 40 0.00086 27.7 3.5 22 120-142 226-248 (270)
304 PRK10964 ADP-heptose:LPS hepto 38.4 57 0.0012 27.6 4.4 38 55-94 178-215 (322)
305 PRK02399 hypothetical protein; 38.3 2.8E+02 0.0062 24.5 10.2 94 59-159 6-127 (406)
306 KOG2872 Uroporphyrinogen decar 38.2 1.3E+02 0.0027 25.1 5.8 69 55-137 252-336 (359)
307 KOG2805 tRNA (5-methylaminomet 38.1 1.3E+02 0.0028 25.4 5.9 62 55-127 6-68 (377)
308 KOG1252 Cystathionine beta-syn 37.8 2.1E+02 0.0046 24.5 7.3 118 35-161 187-336 (362)
309 TIGR00521 coaBC_dfp phosphopan 37.2 2.3E+02 0.005 25.0 7.9 76 56-136 113-193 (390)
310 PRK07313 phosphopantothenoylcy 37.1 1.2E+02 0.0027 23.2 5.6 64 55-123 113-179 (182)
311 PF05724 TPMT: Thiopurine S-me 37.0 36 0.00079 27.0 2.8 31 56-98 38-68 (218)
312 cd07224 Pat_like Patatin-like 36.9 47 0.001 26.7 3.5 34 118-151 17-51 (233)
313 cd07206 Pat_TGL3-4-5_SDP1 Tria 36.9 37 0.00081 28.4 2.9 34 120-154 89-122 (298)
314 COG2939 Carboxypeptidase C (ca 36.7 43 0.00093 30.1 3.4 55 282-337 428-490 (498)
315 PF10081 Abhydrolase_9: Alpha/ 35.3 81 0.0018 26.1 4.5 49 115-163 93-146 (289)
316 COG3340 PepE Peptidase E [Amin 35.2 2E+02 0.0044 22.8 6.4 39 55-97 32-70 (224)
317 COG3887 Predicted signaling pr 34.7 1.1E+02 0.0024 28.3 5.6 47 113-163 325-377 (655)
318 COG2230 Cfa Cyclopropane fatty 34.5 1.1E+02 0.0023 25.5 5.2 49 112-161 55-105 (283)
319 TIGR02883 spore_cwlD N-acetylm 33.6 1.3E+02 0.0028 23.2 5.3 35 92-127 2-44 (189)
320 PF05577 Peptidase_S28: Serine 33.6 40 0.00087 30.1 2.9 38 282-322 379-416 (434)
321 PF01583 APS_kinase: Adenylyls 33.3 68 0.0015 23.9 3.6 38 55-97 1-38 (156)
322 TIGR02193 heptsyl_trn_I lipopo 33.2 77 0.0017 26.8 4.4 39 55-95 179-217 (319)
323 TIGR01663 PNK-3'Pase polynucle 33.2 1.2E+02 0.0025 28.1 5.6 37 54-98 367-403 (526)
324 KOG3551 Syntrophins (type beta 33.0 60 0.0013 28.0 3.5 33 35-67 455-497 (506)
325 cd00382 beta_CA Carbonic anhyd 32.1 73 0.0016 22.4 3.4 31 113-144 44-74 (119)
326 cd05312 NAD_bind_1_malic_enz N 31.8 1.4E+02 0.003 24.8 5.4 83 57-148 26-125 (279)
327 cd07204 Pat_PNPLA_like Patatin 31.7 69 0.0015 25.9 3.7 20 132-151 34-53 (243)
328 PF03681 UPF0150: Uncharacteri 31.6 73 0.0016 17.9 2.8 33 88-124 12-44 (48)
329 COG0859 RfaF ADP-heptose:LPS h 31.3 82 0.0018 27.0 4.3 39 55-95 175-214 (334)
330 PRK00131 aroK shikimate kinase 31.2 56 0.0012 24.4 3.0 35 55-97 3-37 (175)
331 PLN02840 tRNA dimethylallyltra 30.7 2.7E+02 0.0059 24.8 7.3 74 55-136 20-118 (421)
332 KOG0780 Signal recognition par 30.5 3.5E+02 0.0076 23.9 7.5 63 89-159 183-247 (483)
333 PF07521 RMMBL: RNA-metabolisi 30.3 1E+02 0.0022 16.9 4.2 32 90-134 7-38 (43)
334 PF02353 CMAS: Mycolic acid cy 29.1 89 0.0019 25.9 4.0 49 110-159 42-93 (273)
335 TIGR01361 DAHP_synth_Bsub phos 29.1 3.3E+02 0.0071 22.4 7.9 72 54-139 131-206 (260)
336 COG1598 Predicted nuclease of 29.0 1.2E+02 0.0027 19.0 3.8 33 87-123 13-45 (73)
337 PF06309 Torsin: Torsin; Inte 29.0 47 0.001 23.7 2.0 19 52-70 49-67 (127)
338 PRK13256 thiopurine S-methyltr 28.6 44 0.00095 26.7 2.0 29 58-98 46-74 (226)
339 TIGR00959 ffh signal recogniti 28.4 4.2E+02 0.009 23.8 8.1 64 89-160 182-247 (428)
340 TIGR02964 xanthine_xdhC xanthi 27.9 74 0.0016 25.8 3.3 34 57-100 101-134 (246)
341 cd07218 Pat_iPLA2 Calcium-inde 27.9 76 0.0016 25.8 3.3 20 132-151 33-52 (245)
342 cd00006 PTS_IIA_man PTS_IIA, P 27.7 2.2E+02 0.0047 20.0 7.0 74 57-147 3-76 (122)
343 TIGR02540 gpx7 putative glutat 27.5 1.8E+02 0.004 21.2 5.2 81 35-127 6-87 (153)
344 TIGR02764 spore_ybaN_pdaB poly 27.4 39 0.00084 26.0 1.6 34 56-96 152-188 (191)
345 cd03379 beta_CA_cladeD Carboni 26.7 1.1E+02 0.0023 22.4 3.7 30 113-143 41-70 (142)
346 cd07221 Pat_PNPLA3 Patatin-lik 26.4 84 0.0018 25.7 3.3 22 130-151 33-54 (252)
347 PF13728 TraF: F plasmid trans 26.3 1.9E+02 0.0042 22.9 5.2 42 57-104 124-165 (215)
348 cd07211 Pat_PNPLA8 Patatin-lik 26.3 50 0.0011 27.8 2.1 17 132-148 44-60 (308)
349 PLN03006 carbonate dehydratase 26.1 1.3E+02 0.0029 25.2 4.4 30 114-144 158-187 (301)
350 PRK04148 hypothetical protein; 26.0 1.4E+02 0.003 21.6 4.0 30 129-162 18-47 (134)
351 PF03610 EIIA-man: PTS system 25.8 2.3E+02 0.005 19.6 7.1 77 57-149 2-78 (116)
352 TIGR00174 miaA tRNA isopenteny 25.5 2E+02 0.0044 24.0 5.4 71 58-136 1-96 (287)
353 COG1506 DAP2 Dipeptidyl aminop 25.5 2.6E+02 0.0057 26.5 6.8 46 54-103 550-595 (620)
354 COG0324 MiaA tRNA delta(2)-iso 25.3 3.7E+02 0.008 22.8 6.8 75 55-137 2-101 (308)
355 PF13478 XdhC_C: XdhC Rossmann 25.2 72 0.0016 23.1 2.5 18 82-99 14-31 (136)
356 PF06833 MdcE: Malonate decarb 24.8 96 0.0021 24.9 3.2 54 91-144 67-123 (234)
357 cd07222 Pat_PNPLA4 Patatin-lik 24.8 96 0.0021 25.2 3.4 17 132-148 34-50 (246)
358 PRK11889 flhF flagellar biosyn 24.7 5.1E+02 0.011 23.2 7.7 71 82-160 313-385 (436)
359 PF01734 Patatin: Patatin-like 24.6 67 0.0015 24.3 2.5 21 129-149 27-47 (204)
360 cd08769 DAP_dppA_2 Peptidase M 24.6 1.9E+02 0.0042 23.9 5.0 52 276-333 144-198 (270)
361 COG4667 Predicted esterase of 24.5 66 0.0014 26.3 2.3 43 115-159 27-70 (292)
362 cd07220 Pat_PNPLA2 Patatin-lik 24.4 91 0.002 25.4 3.2 22 130-151 37-58 (249)
363 cd07213 Pat17_PNPLA8_PNPLA9_li 24.3 60 0.0013 27.1 2.2 19 132-150 37-55 (288)
364 COG2069 CdhD CO dehydrogenase/ 24.2 4.3E+02 0.0094 22.2 8.0 51 83-138 158-208 (403)
365 TIGR02884 spore_pdaA delta-lac 24.0 67 0.0014 25.6 2.3 34 56-96 187-221 (224)
366 cd07217 Pat17_PNPLA8_PNPLA9_li 24.0 61 0.0013 27.9 2.2 18 132-149 44-61 (344)
367 PF07279 DUF1442: Protein of u 23.7 1.6E+02 0.0035 23.3 4.2 43 118-162 29-77 (218)
368 PLN02154 carbonic anhydrase 23.4 1.9E+02 0.0041 24.2 4.8 33 113-146 151-183 (290)
369 PF09419 PGP_phosphatase: Mito 23.1 3.4E+02 0.0074 20.6 6.0 54 84-140 36-89 (168)
370 PF13709 DUF4159: Domain of un 23.1 2.1E+02 0.0045 22.6 4.8 57 279-336 53-110 (207)
371 TIGR02873 spore_ylxY probable 22.8 72 0.0016 26.3 2.4 34 56-96 231-264 (268)
372 COG1576 Uncharacterized conser 22.8 2.7E+02 0.006 20.7 5.0 47 89-144 67-113 (155)
373 PRK14729 miaA tRNA delta(2)-is 22.8 4.5E+02 0.0098 22.2 7.0 72 56-136 4-100 (300)
374 PLN03093 Protein SENSITIVITY T 22.7 1.8E+02 0.0039 24.0 4.4 14 129-142 198-211 (273)
375 COG2240 PdxK Pyridoxal/pyridox 22.7 3.2E+02 0.0068 22.8 5.8 76 87-165 26-114 (281)
376 TIGR00064 ftsY signal recognit 22.7 4.5E+02 0.0097 21.8 7.9 66 88-161 153-226 (272)
377 cd00883 beta_CA_cladeA Carboni 22.7 1.4E+02 0.003 23.0 3.7 32 114-146 67-98 (182)
378 PRK13947 shikimate kinase; Pro 22.3 87 0.0019 23.4 2.6 32 59-98 4-35 (171)
379 PRK13938 phosphoheptose isomer 22.1 2.6E+02 0.0057 21.8 5.2 29 123-151 40-68 (196)
380 cd06583 PGRP Peptidoglycan rec 22.0 1.4E+02 0.0031 20.7 3.6 50 91-140 68-117 (126)
381 cd02020 CMPK Cytidine monophos 22.0 1.5E+02 0.0033 21.1 3.9 31 58-96 1-31 (147)
382 PRK13948 shikimate kinase; Pro 21.6 1.2E+02 0.0025 23.4 3.1 35 55-97 9-43 (182)
383 PF08484 Methyltransf_14: C-me 21.3 2.9E+02 0.0063 20.7 5.1 52 111-162 50-102 (160)
384 PF00484 Pro_CA: Carbonic anhy 21.2 2.4E+02 0.0051 20.7 4.7 36 111-147 38-73 (153)
385 COG1709 Predicted transcriptio 21.2 2.7E+02 0.0058 22.2 4.8 43 44-97 186-228 (241)
386 PRK14194 bifunctional 5,10-met 21.0 1.7E+02 0.0037 24.7 4.1 35 115-149 143-182 (301)
387 PHA02114 hypothetical protein 20.9 1.4E+02 0.0031 20.0 2.9 34 56-96 83-116 (127)
388 PF01118 Semialdhyde_dh: Semia 20.8 1.2E+02 0.0026 21.2 2.9 32 130-162 1-33 (121)
389 PRK13728 conjugal transfer pro 20.7 1.6E+02 0.0035 22.6 3.7 54 36-101 58-111 (181)
390 COG3946 VirJ Type IV secretory 20.7 4.5E+02 0.0098 23.4 6.5 80 82-163 69-156 (456)
391 PRK08762 molybdopterin biosynt 20.7 5.8E+02 0.013 22.3 7.7 36 124-163 132-168 (376)
392 COG0331 FabD (acyl-carrier-pro 20.5 1.2E+02 0.0026 25.7 3.2 22 126-148 83-104 (310)
393 TIGR03607 patatin-related prot 20.4 1.3E+02 0.0028 29.0 3.7 35 113-148 48-85 (739)
394 PF03490 Varsurf_PPLC: Variant 20.4 1.2E+02 0.0025 17.4 2.1 26 109-135 6-31 (51)
395 COG1092 Predicted SAM-dependen 20.4 2.5E+02 0.0054 24.8 5.2 48 89-137 290-337 (393)
396 PRK13255 thiopurine S-methyltr 20.3 1E+02 0.0022 24.5 2.7 16 82-98 53-68 (218)
397 cd03789 GT1_LPS_heptosyltransf 20.2 1.7E+02 0.0036 24.2 4.1 39 55-95 121-159 (279)
398 PRK06762 hypothetical protein; 20.1 1.3E+02 0.0029 22.2 3.2 15 56-70 2-16 (166)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.2e-36 Score=250.47 Aligned_cols=268 Identities=16% Similarity=0.142 Sum_probs=173.0
Q ss_pred eeeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-------
Q 019314 35 LLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP------- 107 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~------- 107 (343)
...+.+|.+++|...|+ ++++|||+||+++++.. |+.++ +.|.++ |+|+++|+||||.|+.+.
T Consensus 11 ~~~~~~~~~i~y~~~G~--~~~~vlllHG~~~~~~~-----w~~~~-~~L~~~--~~vi~~DlpG~G~S~~~~~~~~~~~ 80 (294)
T PLN02824 11 RTWRWKGYNIRYQRAGT--SGPALVLVHGFGGNADH-----WRKNT-PVLAKS--HRVYAIDLLGYGYSDKPNPRSAPPN 80 (294)
T ss_pred ceEEEcCeEEEEEEcCC--CCCeEEEECCCCCChhH-----HHHHH-HHHHhC--CeEEEEcCCCCCCCCCCcccccccc
Confidence 34456899999999985 35899999999999999 99997 888864 799999999999998642
Q ss_pred -CccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccccccc-CCCCCccchHH---HHhh
Q 019314 108 -KRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYW-WPGFPANLTKE---AYYL 182 (343)
Q Consensus 108 -~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~-~~~~~~~~~~~---~~~~ 182 (343)
.++++++++|+.++++.++. ++++++||||||.+++.+|.++|++|+++|++++..... ....+ ..... .+..
T Consensus 81 ~~~~~~~~a~~l~~~l~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~-~~~~~~~~~~~~ 158 (294)
T PLN02824 81 SFYTFETWGEQLNDFCSDVVG-DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQP-WLGRPFIKAFQN 158 (294)
T ss_pred ccCCHHHHHHHHHHHHHHhcC-CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccc-hhhhHHHHHHHH
Confidence 47999999999999999999 799999999999999999999999999999999853211 00000 00000 0000
Q ss_pred ccccchHHHHHhh--hchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhc
Q 019314 183 QLPQDQWALRVAH--YAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIG 260 (343)
Q Consensus 183 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (343)
............. .............+. ........ ....+.. . .........+ .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~---~~~~~~~-~-----~~~~~~~~~~-~~~~~- 219 (294)
T PLN02824 159 LLRETAVGKAFFKSVATPETVKNILCQCYH--------DDSAVTDE---LVEAILR-P-----GLEPGAVDVF-LDFIS- 219 (294)
T ss_pred HHhchhHHHHHHHhhcCHHHHHHHHHHhcc--------ChhhccHH---HHHHHHh-c-----cCCchHHHHH-HHHhc-
Confidence 0000000000000 000000000000000 00001110 0000000 0 0000000000 00000
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHcc
Q 019314 261 FGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 337 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 337 (343)
+. ........++++++|+|+|+|++|.++|.+.++.+.+..+++++++++++||+++.| |+++++.|.+|+++
T Consensus 220 ---~~-~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 220 ---YS-GGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred ---cc-cccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 00 000111237889999999999999999999999998888889999999999999998 99999999999975
No 2
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.3e-35 Score=247.60 Aligned_cols=277 Identities=13% Similarity=0.079 Sum_probs=172.0
Q ss_pred eeeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-CccHHH
Q 019314 35 LLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-KRTRKS 113 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~ 113 (343)
.....+|.+++|.+.|. +++|||+||++++... |+.++ +.|.++ |+|+++|+||||.|+.+. .+++++
T Consensus 10 ~~~~~~g~~i~y~~~G~---g~~vvllHG~~~~~~~-----w~~~~-~~L~~~--~~via~D~~G~G~S~~~~~~~~~~~ 78 (295)
T PRK03592 10 RRVEVLGSRMAYIETGE---GDPIVFLHGNPTSSYL-----WRNII-PHLAGL--GRCLAPDLIGMGASDKPDIDYTFAD 78 (295)
T ss_pred eEEEECCEEEEEEEeCC---CCEEEEECCCCCCHHH-----HHHHH-HHHhhC--CEEEEEcCCCCCCCCCCCCCCCHHH
Confidence 55677999999999995 6899999999999999 99987 888775 699999999999998654 479999
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccc-cCCCCCccchHHHHhhccccchHHHH
Q 019314 114 LALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY-WWPGFPANLTKEAYYLQLPQDQWALR 192 (343)
Q Consensus 114 ~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (343)
+++|+.+++++++. ++++++||||||.+|+.+|.++|++|+++|++++.... .+...+.. ....+............
T Consensus 79 ~a~dl~~ll~~l~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 156 (295)
T PRK03592 79 HARYLDAWFDALGL-DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPA-VRELFQALRSPGEGEEM 156 (295)
T ss_pred HHHHHHHHHHHhCC-CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchh-HHHHHHHHhCccccccc
Confidence 99999999999999 79999999999999999999999999999999984321 00000100 00001000000000000
Q ss_pred HhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhcc--CCCCCCCCC
Q 019314 193 VAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGF--GTWEFDPMD 270 (343)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 270 (343)
.... .. .....+... ....+++++...+......+.. ...... ......... ........+
T Consensus 157 ~~~~-~~-----~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~ 219 (295)
T PRK03592 157 VLEE-NV-----FIERVLPGS-----ILRPLSDEEMAVYRRPFPTPES-----RRPTLS-WPRELPIDGEPADVVALVEE 219 (295)
T ss_pred ccch-hh-----HHhhcccCc-----ccccCCHHHHHHHHhhcCCchh-----hhhhhh-hhhhcCCCCcchhhHhhhhH
Confidence 0000 00 000000000 0001111111111110000000 000000 000000000 000000001
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCChhHHHHH-hhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHcccccc
Q 019314 271 LENPFPNSEGSVHLWQGDEDRLVPVILQRYI-SKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGEKVT 341 (343)
Q Consensus 271 ~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~~~ 341 (343)
....++++++|+|+|+|++|.++++.....+ .+..+++++++++++||+++.| |+++++.|.+|+++....
T Consensus 220 ~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~~ 292 (295)
T PRK03592 220 YAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRLA 292 (295)
T ss_pred hHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhccc
Confidence 1223678999999999999999955555444 5567889999999999999998 999999999999876544
No 3
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1e-35 Score=248.88 Aligned_cols=275 Identities=12% Similarity=0.014 Sum_probs=179.3
Q ss_pred hHHHHHHHhhhheeeeecCc-----cEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEec
Q 019314 22 SLFMVLALLDMMLLLQQTSH-----QYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFD 96 (343)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~-----~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 96 (343)
+++..++...+.......++ .+++|.+.|.+ ++|+|||+||++.+... |..++ +.|.+. ||+|+++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~y~~~G~~-~~~~lvliHG~~~~~~~-----w~~~~-~~L~~~-gy~vi~~D 80 (302)
T PRK00870 9 SRFENLPDYPFAPHYVDVDDGDGGPLRMHYVDEGPA-DGPPVLLLHGEPSWSYL-----YRKMI-PILAAA-GHRVIAPD 80 (302)
T ss_pred ccccCCcCCCCCceeEeecCCCCceEEEEEEecCCC-CCCEEEEECCCCCchhh-----HHHHH-HHHHhC-CCEEEEEC
Confidence 46666666667667777777 78999999863 47899999999999999 99987 888755 89999999
Q ss_pred CCCcccCCCCC---CccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCc
Q 019314 97 RPGYGESDPDP---KRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPA 173 (343)
Q Consensus 97 ~~G~G~S~~~~---~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~ 173 (343)
+||||.|+++. .++++++++|+.++++++++ ++++++||||||.+|+.+|.++|++|+++|++++....... ..
T Consensus 81 l~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~ 157 (302)
T PRK00870 81 LIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDL-TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDG--PM 157 (302)
T ss_pred CCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC-CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccc--cc
Confidence 99999998643 36899999999999999998 69999999999999999999999999999999975321100 00
Q ss_pred cchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHH------Hhhhh
Q 019314 174 NLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRA------QVIQQ 247 (343)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 247 (343)
......+......... .. ...... ... ......+....+........... .....
T Consensus 158 ~~~~~~~~~~~~~~~~-~~----~~~~~~----~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (302)
T PRK00870 158 PDAFWAWRAFSQYSPV-LP----VGRLVN----GGT----------VRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPT 218 (302)
T ss_pred hHHHhhhhcccccCch-hh----HHHHhh----ccc----------cccCCHHHHHHhhcccCChhhhcchhhhhhcCCC
Confidence 0000011110000000 00 000000 000 00000000000000000000000 00000
Q ss_pred hchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCce---EEEcCCCCCccccC-
Q 019314 248 GVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIR---YHEIPGSGHLIADA- 323 (343)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~e- 323 (343)
.......... ......++++++|+++|+|++|.++|... +.+.+.+++++ +.+++++||+++.|
T Consensus 219 ~~~~~~~~~~-----------~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 286 (302)
T PRK00870 219 SPDDPAVAAN-----------RAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDS 286 (302)
T ss_pred CCCCcchHHH-----------HHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhC
Confidence 0000000000 00112367899999999999999999866 88999999876 88999999999997
Q ss_pred cchHHHHHHHHHccc
Q 019314 324 DGMTEAIIKALLLGE 338 (343)
Q Consensus 324 p~~~~~~i~~fl~~~ 338 (343)
|+.+++.|.+|+++.
T Consensus 287 p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 287 GEELAEAVLEFIRAT 301 (302)
T ss_pred hHHHHHHHHHHHhcC
Confidence 999999999999763
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=2.4e-35 Score=243.53 Aligned_cols=262 Identities=17% Similarity=0.206 Sum_probs=172.9
Q ss_pred eeeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-CccHHH
Q 019314 35 LLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-KRTRKS 113 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~ 113 (343)
.....+|.+++|...+.++++++|||+||++++... |.+++ +.|.+ +|+|+++|+||||.|+.+. .+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~-----w~~~~-~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~ 76 (276)
T TIGR02240 5 RTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLEL-----VFPFI-EALDP--DLEVIAFDVPGVGGSSTPRHPYRFPG 76 (276)
T ss_pred EEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHH-----HHHHH-HHhcc--CceEEEECCCCCCCCCCCCCcCcHHH
Confidence 566789999999875423345899999999999999 98887 88765 5999999999999998543 468999
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHH
Q 019314 114 LALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRV 193 (343)
Q Consensus 114 ~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (343)
+++++.++++.+++ ++++|+||||||.+++.+|.++|++|+++|++++...... .+. .. ........... ..
T Consensus 77 ~~~~~~~~i~~l~~-~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~--~~~-~~-~~~~~~~~~~~---~~ 148 (276)
T TIGR02240 77 LAKLAARMLDYLDY-GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVM--VPG-KP-KVLMMMASPRR---YI 148 (276)
T ss_pred HHHHHHHHHHHhCc-CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCcccc--CCC-ch-hHHHHhcCchh---hh
Confidence 99999999999999 6999999999999999999999999999999998643210 000 00 00000000000 00
Q ss_pred hhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCC
Q 019314 194 AHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLEN 273 (343)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (343)
..... ......++.. .... ..+....... ......... ......... .+ ....
T Consensus 149 ~~~~~----~~~~~~~~~~---------~~~~-~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~-~~-----~~~~ 201 (276)
T TIGR02240 149 QPSHG----IHIAPDIYGG---------AFRR-DPELAMAHAS------KVRSGGKLG-YYWQLFAGL-GW-----TSIH 201 (276)
T ss_pred ccccc----cchhhhhccc---------eeec-cchhhhhhhh------hcccCCCch-HHHHHHHHc-CC-----chhh
Confidence 00000 0000000000 0000 0000000000 000000000 000000000 00 1112
Q ss_pred CCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHccccc
Q 019314 274 PFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGEKV 340 (343)
Q Consensus 274 ~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~~ 340 (343)
.+++|++|+|+|+|++|+++|++..+.+.+.+++++++++++ ||+++.| |+++++.|.+|+++..+
T Consensus 202 ~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 202 WLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred HhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHHhhh
Confidence 378899999999999999999999999999999999999985 9999997 99999999999987644
No 5
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=7e-35 Score=230.77 Aligned_cols=283 Identities=20% Similarity=0.217 Sum_probs=186.9
Q ss_pred HHhhhheeeeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC
Q 019314 28 ALLDMMLLLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP 107 (343)
Q Consensus 28 ~~~~~~~~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~ 107 (343)
....+..++.+.+|.+++|.+.|+ +++|.|+++||++.+..+ |+.+. ..|+.+ ||+|+|+|+||+|.|+.++
T Consensus 18 ~~~~~~hk~~~~~gI~~h~~e~g~-~~gP~illlHGfPe~wys-----wr~q~-~~la~~-~~rviA~DlrGyG~Sd~P~ 89 (322)
T KOG4178|consen 18 NLSAISHKFVTYKGIRLHYVEGGP-GDGPIVLLLHGFPESWYS-----WRHQI-PGLASR-GYRVIAPDLRGYGFSDAPP 89 (322)
T ss_pred ChhhcceeeEEEccEEEEEEeecC-CCCCEEEEEccCCccchh-----hhhhh-hhhhhc-ceEEEecCCCCCCCCCCCC
Confidence 344455688889999999999986 568999999999999999 99997 889877 7999999999999999766
Q ss_pred C---ccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhh--
Q 019314 108 K---RTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYL-- 182 (343)
Q Consensus 108 ~---~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~-- 182 (343)
. |++..++.|+..++++++. ++++++||+||+++|+.+|..+|++|+++|+++.... .|..........
T Consensus 90 ~~~~Yt~~~l~~di~~lld~Lg~-~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~-----~p~~~~~~~~~~~f 163 (322)
T KOG4178|consen 90 HISEYTIDELVGDIVALLDHLGL-KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP-----NPKLKPLDSSKAIF 163 (322)
T ss_pred CcceeeHHHHHHHHHHHHHHhcc-ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC-----Ccccchhhhhcccc
Confidence 4 7999999999999999998 7999999999999999999999999999999997643 111111000000
Q ss_pred ------ccccchH--HHHHhh-hchHHHhhhhccCCCCcchh---cccCccccchhhhhhhhHHHHHHHHHHHhhhhhch
Q 019314 183 ------QLPQDQW--ALRVAH-YAPWLAYWWNTQKLFPPSAV---VARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVH 250 (343)
Q Consensus 183 ------~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (343)
...+... ...+.. ..+........+........ ....+..+++++.+.+..... ..+ .
T Consensus 164 ~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~---------~~g-~ 233 (322)
T KOG4178|consen 164 GKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQ---------IDG-F 233 (322)
T ss_pred CccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccc---------ccc-c
Confidence 0000000 000000 00001111111111000000 000112233333333332221 111 1
Q ss_pred hhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChh-HHHHHhhcCCCc-eEEEcCCCCCccccC-cchH
Q 019314 251 ESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVI-LQRYISKKLPWI-RYHEIPGSGHLIADA-DGMT 327 (343)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~gH~~~~e-p~~~ 327 (343)
....+.......+|+ .....+.++++|+++|+|++|.+.+.. ....+.+.+|+. +.++++|+||+++.| |+++
T Consensus 234 ~gplNyyrn~~r~w~----a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v 309 (322)
T KOG4178|consen 234 TGPLNYYRNFRRNWE----AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEV 309 (322)
T ss_pred cccchhhHHHhhCch----hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHH
Confidence 111111222222222 122236789999999999999999866 455666667776 788999999999998 9999
Q ss_pred HHHHHHHHccc
Q 019314 328 EAIIKALLLGE 338 (343)
Q Consensus 328 ~~~i~~fl~~~ 338 (343)
++.+.+|+++.
T Consensus 310 ~~~i~~f~~~~ 320 (322)
T KOG4178|consen 310 NQAILGFINSF 320 (322)
T ss_pred HHHHHHHHHhh
Confidence 99999999864
No 6
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2e-34 Score=245.49 Aligned_cols=276 Identities=14% Similarity=0.115 Sum_probs=168.8
Q ss_pred eeecCcc-EEEEEeccCC---CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC--Cc
Q 019314 36 LQQTSHQ-YLKFLNSIEY---PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP--KR 109 (343)
Q Consensus 36 ~~~~~~~-~l~y~~~g~~---~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~ 109 (343)
....+|. +++|.+.|++ +.+|+|||+||++++... |.+++ +.|.+ +|+|+++|+||||.|+.+. .+
T Consensus 65 ~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~-----w~~~~-~~L~~--~~~via~Dl~G~G~S~~~~~~~~ 136 (360)
T PLN02679 65 KWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPH-----WRRNI-GVLAK--NYTVYAIDLLGFGASDKPPGFSY 136 (360)
T ss_pred eEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHH-----HHHHH-HHHhc--CCEEEEECCCCCCCCCCCCCccc
Confidence 3344566 9999999862 135899999999999999 99987 88865 6999999999999998653 46
Q ss_pred cHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHH-HhhcccceeEEEcccccccCCCCCccchHHHHhhccccch
Q 019314 110 TRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLK-YISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQ 188 (343)
Q Consensus 110 ~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~-~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (343)
+++++++++.++++.+++ ++++|+||||||.+++.++. .+|++|+++|++++....... ...............
T Consensus 137 ~~~~~a~~l~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~----~~~~~~~~~~~~~~~ 211 (360)
T PLN02679 137 TMETWAELILDFLEEVVQ-KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNK----AVVDDWRIKLLLPLL 211 (360)
T ss_pred cHHHHHHHHHHHHHHhcC-CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccc----cccchHHHhhhcchH
Confidence 899999999999999999 79999999999999999887 479999999999985321100 000000000000000
Q ss_pred HHH-HHhh---hchHHHhhhhccCCCCcc-hhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCC
Q 019314 189 WAL-RVAH---YAPWLAYWWNTQKLFPPS-AVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGT 263 (343)
Q Consensus 189 ~~~-~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (343)
+.. .+.. ....+.........+... ...........++..+.+.. . .........+.. .....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~-~~~~~-- 279 (360)
T PLN02679 212 WLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRG----P-----ADDEGALDAFVS-IVTGP-- 279 (360)
T ss_pred HHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHh----h-----ccCCChHHHHHH-HHhcC--
Confidence 000 0000 000000000000000000 00000000111111110000 0 000000011110 00000
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhH-----HHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHcc
Q 019314 264 WEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVIL-----QRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 337 (343)
Q Consensus 264 ~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 337 (343)
...+....+++|++|+|+|+|++|.++|++. .+.+.+.+|++++++++++||+++.| |+++++.|.+||++
T Consensus 280 ---~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 280 ---PGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred ---CCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 0001122377899999999999999998763 34577778999999999999999998 99999999999987
Q ss_pred cc
Q 019314 338 EK 339 (343)
Q Consensus 338 ~~ 339 (343)
..
T Consensus 357 ~~ 358 (360)
T PLN02679 357 LP 358 (360)
T ss_pred cC
Confidence 54
No 7
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=5.4e-34 Score=232.58 Aligned_cols=245 Identities=13% Similarity=0.063 Sum_probs=157.8
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC--CccHHHHHHHHHHHHHHhCCCCeEEE
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP--KRTRKSLALDIEELADQLGLGSKFYV 133 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~di~~~l~~l~~~~~~~l 133 (343)
-+|||+||++.+... |+.++ +.|.+. ||+|+++|+||||.|+.+. .++++++++|+.++++.++..+++++
T Consensus 4 ~~vvllHG~~~~~~~-----w~~~~-~~L~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~l 76 (255)
T PLN02965 4 IHFVFVHGASHGAWC-----WYKLA-TLLDAA-GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVIL 76 (255)
T ss_pred eEEEEECCCCCCcCc-----HHHHH-HHHhhC-CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 359999999999999 99987 888655 8999999999999998543 46899999999999999986349999
Q ss_pred EEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcc
Q 019314 134 VGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPS 213 (343)
Q Consensus 134 vG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (343)
+||||||.+++.+|.++|++|+++|++++.... +.......+..... .. . ..+. ..+...
T Consensus 77 vGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~-----~~~~~~~~~~~~~~---------~~-~---~~~~--~~~~~~ 136 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFTDKISMAIYVAAAMVK-----PGSIISPRLKNVME---------GT-E---KIWD--YTFGEG 136 (255)
T ss_pred EecCcchHHHHHHHHhCchheeEEEEEccccCC-----CCCCccHHHHhhhh---------cc-c---ccee--eeeccC
Confidence 999999999999999999999999999985321 11000000000000 00 0 0000 000000
Q ss_pred hhcccCccccchhhhhhhhHHH-HHHHHHHHhhhhhchhhhHHHHHhccCCCC--CCCCCCCCCCCCCCCcEEEEecCCC
Q 019314 214 AVVARRPEIFSAQDVQLMPKLA-VRQINRAQVIQQGVHESLFRDMMIGFGTWE--FDPMDLENPFPNSEGSVHLWQGDED 290 (343)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~Pvl~i~G~~D 290 (343)
............ +...... ........ . ...... ....+. ....++...++++++|+++|+|++|
T Consensus 137 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-------~-~~~~~~-~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D 204 (255)
T PLN02965 137 PDKPPTGIMMKP---EFVRHYYYNQSPLEDY-------T-LSSKLL-RPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKD 204 (255)
T ss_pred CCCCcchhhcCH---HHHHHHHhcCCCHHHH-------H-HHHHhc-CCCCCcchhhhhhccchhhcCCCCEEEEEcCCC
Confidence 000000000000 0000000 00000000 0 000000 000000 0001122246679999999999999
Q ss_pred CCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHcccc
Q 019314 291 RLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGEK 339 (343)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~ 339 (343)
.++|++..+.+++.+|++++++++++||+++.| |+.+++.|.+|++..+
T Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 205 NLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred CCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999998 9999999999987653
No 8
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=9.9e-34 Score=234.20 Aligned_cols=264 Identities=16% Similarity=0.141 Sum_probs=166.1
Q ss_pred eeeeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC--CccH
Q 019314 34 LLLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP--KRTR 111 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~ 111 (343)
.....++|.+++|...|. +++|||+||++.+... |+.++ +.|.+ +|+|+++|+||||.|+.+. .++.
T Consensus 16 ~~~~~~~~~~i~y~~~G~---~~~iv~lHG~~~~~~~-----~~~~~-~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~ 84 (286)
T PRK03204 16 SRWFDSSRGRIHYIDEGT---GPPILLCHGNPTWSFL-----YRDII-VALRD--RFRCVAPDYLGFGLSERPSGFGYQI 84 (286)
T ss_pred ceEEEcCCcEEEEEECCC---CCEEEEECCCCccHHH-----HHHHH-HHHhC--CcEEEEECCCCCCCCCCCCccccCH
Confidence 356677899999999985 6899999999988888 88886 78765 6999999999999998654 3688
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHH
Q 019314 112 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWAL 191 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (343)
+++++++.+++++++. ++++++||||||.+++.++..+|++|+++|++++... + +.......+...........
T Consensus 85 ~~~~~~~~~~~~~~~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~---~--~~~~~~~~~~~~~~~~~~~~ 158 (286)
T PRK03204 85 DEHARVIGEFVDHLGL-DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFW---P--ADTLAMKAFSRVMSSPPVQY 158 (286)
T ss_pred HHHHHHHHHHHHHhCC-CCEEEEEECccHHHHHHHHHhChhheeEEEEECcccc---C--CCchhHHHHHHHhccccchh
Confidence 9999999999999998 7999999999999999999999999999999887421 1 10101111110000000000
Q ss_pred HHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhh-hhhchhhhHHHHHhccCCCCCCCCC
Q 019314 192 RVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVI-QQGVHESLFRDMMIGFGTWEFDPMD 270 (343)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
.... .... ...++... .....+......+......+....... ......... .... +
T Consensus 159 ~~~~-~~~~-----~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----------~ 216 (286)
T PRK03204 159 AILR-RNFF-----VERLIPAG-----TEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAAR-PLLA----------R 216 (286)
T ss_pred hhhh-hhHH-----HHHhcccc-----ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhh-HHHH----------H
Confidence 0000 0000 00111000 000111111111110000000000000 000000000 0000 1
Q ss_pred CCCCCCC--CCCcEEEEecCCCCCCChh-HHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 271 LENPFPN--SEGSVHLWQGDEDRLVPVI-LQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 271 ~~~~~~~--i~~Pvl~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
+...+++ +++|+++|+|++|.++++. ..+.+.+.+|++++++++++||+++.| |+++++.|.+|+.
T Consensus 217 ~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 217 LAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred hhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 1001111 2788999999999988655 578899999999999999999999998 9999999999973
No 9
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.2e-32 Score=228.44 Aligned_cols=266 Identities=18% Similarity=0.185 Sum_probs=174.2
Q ss_pred eeeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC--CccHH
Q 019314 35 LLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP--KRTRK 112 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~ 112 (343)
.+++.++.+++|.+.|+ .++++|||+||++++... |..++ +.|.+ +|+|+++|+||||.|+.+. .++++
T Consensus 9 ~~~~~~~~~~~~~~~g~-~~~~~vv~~hG~~~~~~~-----~~~~~-~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~ 79 (278)
T TIGR03056 9 RRVTVGPFHWHVQDMGP-TAGPLLLLLHGTGASTHS-----WRDLM-PPLAR--SFRVVAPDLPGHGFTRAPFRFRFTLP 79 (278)
T ss_pred ceeeECCEEEEEEecCC-CCCCeEEEEcCCCCCHHH-----HHHHH-HHHhh--CcEEEeecCCCCCCCCCccccCCCHH
Confidence 56678999999999986 346899999999999999 98887 88865 6999999999999998654 46999
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHH
Q 019314 113 SLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALR 192 (343)
Q Consensus 113 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (343)
++++|+.++++.+++ ++++|+||||||.+++.+|.++|++++++|++++..... ........ .........
T Consensus 80 ~~~~~l~~~i~~~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~-~~~~~~~~-~~~~~~~~~------ 150 (278)
T TIGR03056 80 SMAEDLSALCAAEGL-SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPF-EGMAGTLF-PYMARVLAC------ 150 (278)
T ss_pred HHHHHHHHHHHHcCC-CCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccc-cccccccc-chhhHhhhh------
Confidence 999999999999998 799999999999999999999999999999998854311 00000000 000000000
Q ss_pred HhhhchHHHhhhhc-cCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCC
Q 019314 193 VAHYAPWLAYWWNT-QKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDL 271 (343)
Q Consensus 193 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
....+........ ..... .................+..... ...... ........|... ..
T Consensus 151 -~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~----~~~~~~~~~~~~--~~ 212 (278)
T TIGR03056 151 -NPFTPPMMSRGAADQQRVE--RLIRDTGSLLDKAGMTYYGRLIR---------SPAHVD----GALSMMAQWDLA--PL 212 (278)
T ss_pred -cccchHHHHhhcccCcchh--HHhhccccccccchhhHHHHhhc---------Cchhhh----HHHHHhhccccc--ch
Confidence 0000000000000 00000 00000000000000000000000 000000 000011112111 22
Q ss_pred CCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 272 ENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 272 ~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
...++++++|+++|+|++|..+|.+..+.+.+.++++++++++++||+++.| |+++++.|.+|++
T Consensus 213 ~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 213 NRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred hhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 2347889999999999999999999999999999999999999999999997 9999999999985
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=5.5e-33 Score=230.72 Aligned_cols=255 Identities=16% Similarity=0.119 Sum_probs=160.4
Q ss_pred ccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhh---hhHHHHhHcCcEEEEecCCCcccCCCCCC--ccHHHHH
Q 019314 41 HQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACL---SFQEVVDELGIYIVSFDRPGYGESDPDPK--RTRKSLA 115 (343)
Q Consensus 41 ~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~---~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~ 115 (343)
+.+++|...|. +++|||+||++.+... |... + ..+.+. ||+|+++|+||||.|+.... .....++
T Consensus 19 ~~~~~y~~~g~---~~~ivllHG~~~~~~~-----~~~~~~~~-~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 88 (282)
T TIGR03343 19 NFRIHYNEAGN---GEAVIMLHGGGPGAGG-----WSNYYRNI-GPFVDA-GYRVILKDSPGFNKSDAVVMDEQRGLVNA 88 (282)
T ss_pred ceeEEEEecCC---CCeEEEECCCCCchhh-----HHHHHHHH-HHHHhC-CCEEEEECCCCCCCCCCCcCcccccchhH
Confidence 56799998885 6789999999988888 5432 2 455544 89999999999999986432 2223578
Q ss_pred HHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCcc-chHHHHhhccccchHHHHHh
Q 019314 116 LDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPAN-LTKEAYYLQLPQDQWALRVA 194 (343)
Q Consensus 116 ~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 194 (343)
+++.++++.++. ++++++||||||.+++.+|.++|++|+++|++++.........+.. .....+......
T Consensus 89 ~~l~~~l~~l~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 159 (282)
T TIGR03343 89 RAVKGLMDALDI-EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAE-------- 159 (282)
T ss_pred HHHHHHHHHcCC-CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcC--------
Confidence 999999999999 7999999999999999999999999999999997521100000000 000000000000
Q ss_pred hhchHHHhhhhccCCCCcchhcccCccccchhhhhhh-hHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCC
Q 019314 195 HYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLM-PKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLEN 273 (343)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (343)
..............+ .......+..+.. ......+. . ................+...
T Consensus 160 -~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~~~ 217 (282)
T TIGR03343 160 -PSYETLKQMLNVFLF--------DQSLITEELLQGRWENIQRQPE---------H----LKNFLISSQKAPLSTWDVTA 217 (282)
T ss_pred -CCHHHHHHHHhhCcc--------CcccCcHHHHHhHHHHhhcCHH---------H----HHHHHHhccccccccchHHH
Confidence 000000000000000 0001111110000 00000000 0 00000000000001112223
Q ss_pred CCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 274 PFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 274 ~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
.++++++|+|+++|++|.++|++.++.+++.+|++++++++++||+++.| |+.+++.|.+|++
T Consensus 218 ~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 218 RLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred HHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 47889999999999999999999999999999999999999999999998 9999999999986
No 11
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=5.3e-33 Score=227.29 Aligned_cols=252 Identities=13% Similarity=0.069 Sum_probs=157.8
Q ss_pred EEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHH
Q 019314 43 YLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELA 122 (343)
Q Consensus 43 ~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l 122 (343)
.++|...|. +.|+|||+||+++++.. |++++ +.|.+ .|+|+++|+||||.|+....++++++++++.+
T Consensus 3 ~~~y~~~G~--g~~~ivllHG~~~~~~~-----w~~~~-~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~-- 70 (256)
T PRK10349 3 NIWWQTKGQ--GNVHLVLLHGWGLNAEV-----WRCID-EELSS--HFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ-- 70 (256)
T ss_pred ccchhhcCC--CCCeEEEECCCCCChhH-----HHHHH-HHHhc--CCEEEEecCCCCCCCCCCCCCCHHHHHHHHHh--
Confidence 367888885 33579999999999999 99987 88875 59999999999999987666687777776653
Q ss_pred HHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHh
Q 019314 123 DQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAY 202 (343)
Q Consensus 123 ~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (343)
+.+ ++++++||||||.+++.+|.++|++|+++|++++..................... ...+.........
T Consensus 71 --~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 141 (256)
T PRK10349 71 --QAP-DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGF------QQQLSDDFQRTVE 141 (256)
T ss_pred --cCC-CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHH------HHHHHhchHHHHH
Confidence 566 6999999999999999999999999999999988533210000000000000000 0000000000000
Q ss_pred hhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcE
Q 019314 203 WWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSV 282 (343)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 282 (343)
.+.....+ ................... .......+.... .... ..++...++++++|+
T Consensus 142 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~-----~~~~~~~l~~i~~P~ 199 (256)
T PRK10349 142 RFLALQTM--------GTETARQDARALKKTVLAL--------PMPEVDVLNGGL-EILK-----TVDLRQPLQNVSMPF 199 (256)
T ss_pred HHHHHHHc--------cCchHHHHHHHHHHHhhcc--------CCCcHHHHHHHH-HHHH-----hCccHHHHhhcCCCe
Confidence 00000000 0000000000000000000 000000000000 0000 012333478899999
Q ss_pred EEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHcc
Q 019314 283 HLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 337 (343)
Q Consensus 283 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 337 (343)
|+|+|++|.++|.+.++.+.+.++++++++++++||+++.| |+.|++.+..|-+.
T Consensus 200 lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 200 LRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred EEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999998 99999999998653
No 12
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=7.9e-33 Score=235.54 Aligned_cols=266 Identities=15% Similarity=0.153 Sum_probs=168.0
Q ss_pred eeeecCccEEEEEeccCC--CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC--cc
Q 019314 35 LLQQTSHQYLKFLNSIEY--PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK--RT 110 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~--~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~ 110 (343)
...+.+|.+++|..+++. +.+++|||+||++++...+ |..++ ..|.+. ||+|+++|+||||.|+.... .+
T Consensus 65 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~----~~~~~-~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~ 138 (349)
T PLN02385 65 YEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFF----FEGIA-RKIASS-GYGVFAMDYPGFGLSEGLHGYIPS 138 (349)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchH----HHHHH-HHHHhC-CCEEEEecCCCCCCCCCCCCCcCC
Confidence 567789999999998863 3467899999999876540 56776 777765 99999999999999986544 38
Q ss_pred HHHHHHHHHHHHHHhCCC-----CeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccc
Q 019314 111 RKSLALDIEELADQLGLG-----SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLP 185 (343)
Q Consensus 111 ~~~~~~di~~~l~~l~~~-----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
++++++|+.++++.++.. .+++|+||||||.+++.++.++|++++++|+++|.........+........
T Consensus 139 ~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~----- 213 (349)
T PLN02385 139 FDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQIL----- 213 (349)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHH-----
Confidence 899999999999887531 3799999999999999999999999999999998643211100110000000
Q ss_pred cchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCC
Q 019314 186 QDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWE 265 (343)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
..+....+. ...+..... ....+............. ...............+....
T Consensus 214 -----~~~~~~~p~-------~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-------- 269 (349)
T PLN02385 214 -----ILLANLLPK-------AKLVPQKDL---AELAFRDLKKRKMAEYNV-IAYKDKPRLRTAVELLRTTQ-------- 269 (349)
T ss_pred -----HHHHHHCCC-------ceecCCCcc---ccccccCHHHHHHhhcCc-ceeCCCcchHHHHHHHHHHH--------
Confidence 000000000 000000000 000000000000000000 00000000000000000000
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcC--CCceEEEcCCCCCccccC-cch----HHHHHHHHHccc
Q 019314 266 FDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL--PWIRYHEIPGSGHLIADA-DGM----TEAIIKALLLGE 338 (343)
Q Consensus 266 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e-p~~----~~~~i~~fl~~~ 338 (343)
++...+.++++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||.++.| |++ +.+.|.+||++.
T Consensus 270 ----~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 270 ----EIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred ----HHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 112237789999999999999999999999998887 468999999999999986 776 778889999865
Q ss_pred c
Q 019314 339 K 339 (343)
Q Consensus 339 ~ 339 (343)
.
T Consensus 346 ~ 346 (349)
T PLN02385 346 S 346 (349)
T ss_pred c
Confidence 4
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.6e-32 Score=224.53 Aligned_cols=249 Identities=16% Similarity=0.152 Sum_probs=162.7
Q ss_pred EEEEeccC--CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHH
Q 019314 44 LKFLNSIE--YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEEL 121 (343)
Q Consensus 44 l~y~~~g~--~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~ 121 (343)
++|...++ +.++|+|||+||++++... |..++ ..|.+ +|+|+++|+||||.|.....++++++++|+.++
T Consensus 3 ~~~~~~~~~~~~~~~~iv~lhG~~~~~~~-----~~~~~-~~l~~--~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~ 74 (255)
T PRK10673 3 LNIRAQTAQNPHNNSPIVLVHGLFGSLDN-----LGVLA-RDLVN--DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDT 74 (255)
T ss_pred ceeeeccCCCCCCCCCEEEECCCCCchhH-----HHHHH-HHHhh--CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 45555432 3467999999999999999 88887 88865 699999999999999987778999999999999
Q ss_pred HHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHH
Q 019314 122 ADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLA 201 (343)
Q Consensus 122 l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (343)
++.++. ++++|+||||||.+++.+|.++|++|+++|++++...... . ......+.... ....
T Consensus 75 l~~l~~-~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~---~-~~~~~~~~~~~-------~~~~------ 136 (255)
T PRK10673 75 LDALQI-EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH---V-RRHDEIFAAIN-------AVSE------ 136 (255)
T ss_pred HHHcCC-CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCcc---c-hhhHHHHHHHH-------Hhhh------
Confidence 999998 6999999999999999999999999999999986432110 0 00000000000 0000
Q ss_pred hhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCc
Q 019314 202 YWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGS 281 (343)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 281 (343)
.................... ....+.... ..... .............. . .....++++++|
T Consensus 137 -----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-~--------~~~~~~~~~~~P 197 (255)
T PRK10673 137 -----AGATTRQQAAAIMRQHLNEE---GVIQFLLKS-FVDGE-WRFNVPVLWDQYPH-I--------VGWEKIPAWPHP 197 (255)
T ss_pred -----cccccHHHHHHHHHHhcCCH---HHHHHHHhc-CCcce-eEeeHHHHHHhHHH-H--------hCCcccCCCCCC
Confidence 00000000000000000000 000000000 00000 00000000000000 0 011236788999
Q ss_pred EEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHcc
Q 019314 282 VHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 337 (343)
Q Consensus 282 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 337 (343)
+|+|+|++|..++.+..+.+.+.++++++++++++||+++.+ |+.+++.|.+||.+
T Consensus 198 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 198 ALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred eEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999997 99999999999975
No 14
>PLN02578 hydrolase
Probab=100.00 E-value=1.1e-32 Score=234.68 Aligned_cols=275 Identities=13% Similarity=0.077 Sum_probs=169.4
Q ss_pred eecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-CccHHHHH
Q 019314 37 QQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLA 115 (343)
Q Consensus 37 ~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~ 115 (343)
...+|.+++|.+.|+ +++|||+||++++... |..++ +.|.+ +|+|+++|+||||.|+++. .++..+++
T Consensus 71 ~~~~~~~i~Y~~~g~---g~~vvliHG~~~~~~~-----w~~~~-~~l~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~a 139 (354)
T PLN02578 71 WTWRGHKIHYVVQGE---GLPIVLIHGFGASAFH-----WRYNI-PELAK--KYKVYALDLLGFGWSDKALIEYDAMVWR 139 (354)
T ss_pred EEECCEEEEEEEcCC---CCeEEEECCCCCCHHH-----HHHHH-HHHhc--CCEEEEECCCCCCCCCCcccccCHHHHH
Confidence 345788999999885 6889999999999988 98887 88875 6999999999999998654 47899999
Q ss_pred HHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccch----HHHHhhccccchHHH
Q 019314 116 LDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLT----KEAYYLQLPQDQWAL 191 (343)
Q Consensus 116 ~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 191 (343)
+++.++++.+.. ++++++|||+||.+++.+|.++|++|+++|++++...+.......... ......... .....
T Consensus 140 ~~l~~~i~~~~~-~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 217 (354)
T PLN02578 140 DQVADFVKEVVK-EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVV-KPLKE 217 (354)
T ss_pred HHHHHHHHHhcc-CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHh-HHHHH
Confidence 999999999987 799999999999999999999999999999998864321111000000 000000000 00000
Q ss_pred HHhhhchHHHhhhhcc-CCCCcc-hhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCC
Q 019314 192 RVAHYAPWLAYWWNTQ-KLFPPS-AVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPM 269 (343)
Q Consensus 192 ~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (343)
...........+.... ...... ...........+. +....... .........+......... .....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~ 286 (354)
T PLN02578 218 WFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDY----LVESITEP-----AADPNAGEVYYRLMSRFLF--NQSRY 286 (354)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHH----HHHHHHhc-----ccCCchHHHHHHHHHHHhc--CCCCC
Confidence 0000000000000000 000000 0000000000000 00000000 0000000000000000000 00011
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 270 DLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 270 ~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
+....++++++|+++|+|++|.++|.+.++.+++.+|+++++++ ++||+++.| |+++++.|.+|++
T Consensus 287 ~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 287 TLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 22234788999999999999999999999999999999999999 589999998 9999999999986
No 15
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=1.1e-32 Score=237.52 Aligned_cols=280 Identities=15% Similarity=0.132 Sum_probs=168.0
Q ss_pred eeeecCccEEEEEeccCCC--CCCeEEEecCCCCCcccchhhhhhh-hhhHHHHh--HcCcEEEEecCCCcccCCCCC--
Q 019314 35 LLQQTSHQYLKFLNSIEYP--TSLLHLNFHLFNGCVGSLNFTVLAC-LSFQEVVD--ELGIYIVSFDRPGYGESDPDP-- 107 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~--~~~~vv~ihG~~~~~~~~~~~~~~~-~~~~~l~~--~~g~~vi~~D~~G~G~S~~~~-- 107 (343)
....+++.+++|...|+.. .+++|||+||++++... |.. ++ +.+.+ +.+|+|+++|+||||.|+.+.
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~-----W~~~~~-~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~ 252 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAF-----WTETLF-PNFSDAAKSTYRLFAVDLLGFGRSPKPADS 252 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHH-----HHHHHH-HHHHHHhhCCCEEEEECCCCCCCCcCCCCC
Confidence 4566777899999999732 35899999999999998 764 32 55542 237999999999999998653
Q ss_pred CccHHHHHHHHH-HHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchH-HH-Hhhcc
Q 019314 108 KRTRKSLALDIE-ELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTK-EA-YYLQL 184 (343)
Q Consensus 108 ~~~~~~~~~di~-~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~-~~-~~~~~ 184 (343)
.++++++++++. .+++.+++ ++++++||||||.+++.+|.++|++|+++|++++.... .+..... .. .....
T Consensus 253 ~ytl~~~a~~l~~~ll~~lg~-~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~----~~~~~~~~~~~~~~~~ 327 (481)
T PLN03087 253 LYTLREHLEMIERSVLERYKV-KSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYP----VPKGVQATQYVMRKVA 327 (481)
T ss_pred cCCHHHHHHHHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccc----cccchhHHHHHHHHhc
Confidence 379999999995 89999999 79999999999999999999999999999999975321 1111000 00 00000
Q ss_pred ccchHHH-HHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhh----h---hhchhhhHHH
Q 019314 185 PQDQWAL-RVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVI----Q---QGVHESLFRD 256 (343)
Q Consensus 185 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~ 256 (343)
....+.. ........+... ....... .........+................ . ......+. .
T Consensus 328 ~~~~~~~~~~~~~~~~w~~~--~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~-~ 397 (481)
T PLN03087 328 PRRVWPPIAFGASVACWYEH--ISRTICL-------VICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLH-N 397 (481)
T ss_pred ccccCCccccchhHHHHHHH--HHhhhhc-------ccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHH-H
Confidence 0000000 000000000000 0000000 00000000000000000000000000 0 00000000 0
Q ss_pred HHhccCCCCCCC-CCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCcccc-C-cchHHHHHHH
Q 019314 257 MMIGFGTWEFDP-MDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIAD-A-DGMTEAIIKA 333 (343)
Q Consensus 257 ~~~~~~~~~~~~-~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e-p~~~~~~i~~ 333 (343)
.... ..... ..+....++|++|+|+|+|++|.++|++..+.+++.+|++++++++++||+++. | |+.+++.|.+
T Consensus 398 ~i~~---~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~ 474 (481)
T PLN03087 398 IICG---SGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEE 474 (481)
T ss_pred HHhc---hhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHH
Confidence 0000 00000 001111346899999999999999999999999999999999999999999886 6 9999999999
Q ss_pred HHccc
Q 019314 334 LLLGE 338 (343)
Q Consensus 334 fl~~~ 338 (343)
|.+..
T Consensus 475 F~~~~ 479 (481)
T PLN03087 475 IWRRS 479 (481)
T ss_pred Hhhcc
Confidence 98653
No 16
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=4.2e-32 Score=229.78 Aligned_cols=269 Identities=16% Similarity=0.109 Sum_probs=170.1
Q ss_pred eeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-----Ccc
Q 019314 36 LQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-----KRT 110 (343)
Q Consensus 36 ~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-----~~~ 110 (343)
....++.+++|.+.|+ .++++||||||++.+... |+.++ +.|.+ +|+|+++|+||||.|+.+. .++
T Consensus 109 ~~~~~~~~~~y~~~G~-~~~~~ivllHG~~~~~~~-----w~~~~-~~L~~--~~~Via~DlpG~G~S~~p~~~~~~~ys 179 (383)
T PLN03084 109 QASSDLFRWFCVESGS-NNNPPVLLIHGFPSQAYS-----YRKVL-PVLSK--NYHAIAFDWLGFGFSDKPQPGYGFNYT 179 (383)
T ss_pred EEcCCceEEEEEecCC-CCCCeEEEECCCCCCHHH-----HHHHH-HHHhc--CCEEEEECCCCCCCCCCCcccccccCC
Confidence 4457889999999996 347899999999999999 99997 88865 6999999999999998654 369
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHH
Q 019314 111 RKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWA 190 (343)
Q Consensus 111 ~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (343)
++++++++.++++++++ ++++|+|||+||.+++.+|.++|++|+++|++++.........+.. ...+..... .
T Consensus 180 ~~~~a~~l~~~i~~l~~-~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~--l~~~~~~l~----~ 252 (383)
T PLN03084 180 LDEYVSSLESLIDELKS-DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPST--LSEFSNFLL----G 252 (383)
T ss_pred HHHHHHHHHHHHHHhCC-CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHH--HHHHHHHHh----h
Confidence 99999999999999999 7999999999999999999999999999999998632110000100 000000000 0
Q ss_pred HHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCC
Q 019314 191 LRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMD 270 (343)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
......+... ....+. ........++....+......... .......+.+........+..+...
T Consensus 253 -~~~~~~~~~~----~~~~~~-----~~~~~~~~~e~~~~~~~~~~~~~~-----~~~~l~~~~r~~~~~l~~~~~~l~~ 317 (383)
T PLN03084 253 -EIFSQDPLRA----SDKALT-----SCGPYAMKEDDAMVYRRPYLTSGS-----SGFALNAISRSMKKELKKYIEEMRS 317 (383)
T ss_pred -hhhhcchHHH----Hhhhhc-----ccCccCCCHHHHHHHhccccCCcc-----hHHHHHHHHHHhhcccchhhHHHHh
Confidence 0000000000 000000 000011111111111110000000 0000000000000000000000000
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHcc
Q 019314 271 LENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 337 (343)
Q Consensus 271 ~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 337 (343)
.. ..+++++|+++|+|++|.+++.+..+.+++. +++++.+++++||+++.| |+++++.|.+|+++
T Consensus 318 ~l-~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 318 IL-TDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred hh-ccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 00 0246789999999999999999988888887 488999999999999998 99999999999863
No 17
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=7.3e-33 Score=236.43 Aligned_cols=276 Identities=14% Similarity=0.104 Sum_probs=161.9
Q ss_pred ecCccEEEEEeccCCC------CCCeEEEecCCCCCcccchhhhhh--hhhhHHH-------HhHcCcEEEEecCCCccc
Q 019314 38 QTSHQYLKFLNSIEYP------TSLLHLNFHLFNGCVGSLNFTVLA--CLSFQEV-------VDELGIYIVSFDRPGYGE 102 (343)
Q Consensus 38 ~~~~~~l~y~~~g~~~------~~~~vv~ihG~~~~~~~~~~~~~~--~~~~~~l-------~~~~g~~vi~~D~~G~G~ 102 (343)
+.+|.+++|.+.|++. .+|+|||+||++++... |. .+. ..+ ..+ +|+||++|+||||.
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~-----~~~~~~~-~~l~~~~~~l~~~-~~~Via~Dl~GhG~ 118 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS-----FLSPTFA-GELFGPGQPLDAS-KYFIILPDGIGHGK 118 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh-----hccchhH-HHhcCCCCccccc-CCEEEEeCCCCCCC
Confidence 4678999999999622 16899999999999888 64 332 333 123 79999999999999
Q ss_pred CCCCC--------CccHHHHHHHHHHH-HHHhCCCCeEE-EEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCC
Q 019314 103 SDPDP--------KRTRKSLALDIEEL-ADQLGLGSKFY-VVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFP 172 (343)
Q Consensus 103 S~~~~--------~~~~~~~~~di~~~-l~~l~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~ 172 (343)
|+.+. .++++++++++.++ ++++++ ++++ |+||||||.+|+.+|.++|++|+++|++++.... ..
T Consensus 119 S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi-~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~----~~ 193 (360)
T PRK06489 119 SSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGV-KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTE----MS 193 (360)
T ss_pred CCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCC-CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCccc----cc
Confidence 98543 36889999998885 488999 6875 8999999999999999999999999999875210 00
Q ss_pred ccc--hHHHHhhccccc-hHHHHHhhhch-HHHhhhhccCCC-CcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhh
Q 019314 173 ANL--TKEAYYLQLPQD-QWALRVAHYAP-WLAYWWNTQKLF-PPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQ 247 (343)
Q Consensus 173 ~~~--~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
... ............ .+........+ .....+.....+ ....................+...... ...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~- 266 (360)
T PRK06489 194 GRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAA------PVT- 266 (360)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHh------hhh-
Confidence 000 000000000000 00000000000 000000000000 000000000000000000000000000 000
Q ss_pred hchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHH--HHHhhcCCCceEEEcCCC----CCccc
Q 019314 248 GVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQ--RYISKKLPWIRYHEIPGS----GHLIA 321 (343)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~----gH~~~ 321 (343)
.....+.... .... ..+....+++|++|+|+|+|++|.++|++.. +.+++.+|++++++++++ ||.++
T Consensus 267 ~~~~~~~~~~-~~~~-----~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~ 340 (360)
T PRK06489 267 ADANDFLYQW-DSSR-----DYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT 340 (360)
T ss_pred cCHHHHHHHH-HHhh-----ccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc
Confidence 0000110000 0000 0122334789999999999999999998875 789999999999999996 99997
Q ss_pred cCcchHHHHHHHHHccc
Q 019314 322 DADGMTEAIIKALLLGE 338 (343)
Q Consensus 322 ~ep~~~~~~i~~fl~~~ 338 (343)
.+|+.+++.|.+||++.
T Consensus 341 e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 341 GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred cCHHHHHHHHHHHHHhc
Confidence 34999999999999765
No 18
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=8.3e-32 Score=227.19 Aligned_cols=272 Identities=14% Similarity=0.100 Sum_probs=167.8
Q ss_pred eeeeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC-----
Q 019314 34 LLLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK----- 108 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~----- 108 (343)
..+...+|.+++|..+++...+++||++||++.+... |..++ ..+.+. ||+|+++|+||||.|+....
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~-----y~~~~-~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~ 105 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVK-----YAELA-YDLFHL-GYDVLIIDHRGQGRSGRLLDDPHRG 105 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHH-----HHHHH-HHHHHC-CCeEEEEcCCCCCCCCCCCCCCCcC
Confidence 4677889999999999864457899999999988888 88886 777765 99999999999999975321
Q ss_pred --ccHHHHHHHHHHHHHHh----CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhh
Q 019314 109 --RTRKSLALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYL 182 (343)
Q Consensus 109 --~~~~~~~~di~~~l~~l----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
++++++++|+.++++.+ +. .+++++||||||.+++.+|.++|++++++|+++|......+ .+.... .....
T Consensus 106 ~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~-~~~~~~-~~~~~ 182 (330)
T PRK10749 106 HVERFNDYVDDLAAFWQQEIQPGPY-RKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLP-LPSWMA-RRILN 182 (330)
T ss_pred ccccHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCC-CCcHHH-HHHHH
Confidence 47899999999999887 55 69999999999999999999999999999999986432110 010000 00000
Q ss_pred ccccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccc--hhhhhhhhHHHHHHHHHHHhhh-hhchhhhHHHHHh
Q 019314 183 QLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFS--AQDVQLMPKLAVRQINRAQVIQ-QGVHESLFRDMMI 259 (343)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 259 (343)
+......... ........+.... ......+ .+......+....... ... ........... .
T Consensus 183 ------~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~ 246 (330)
T PRK10749 183 ------WAEGHPRIRD--GYAIGTGRWRPLP----FAINVLTHSRERYRRNLRFYADDPE---LRVGGPTYHWVRESI-L 246 (330)
T ss_pred ------HHHHhcCCCC--cCCCCCCCCCCCC----cCCCCCCCCHHHHHHHHHHHHhCCC---cccCCCcHHHHHHHH-H
Confidence 0000000000 0000000010000 0000000 0000000011100000 000 00000000000 0
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcC-------CCceEEEcCCCCCccccC-c---chHH
Q 019314 260 GFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL-------PWIRYHEIPGSGHLIADA-D---GMTE 328 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~e-p---~~~~ 328 (343)
... .+...++++++|+|+|+|++|.+++++.++.+.+.+ ++++++++||+||.++.| + +.+.
T Consensus 247 ~~~-------~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~ 319 (330)
T PRK10749 247 AGE-------QVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVAL 319 (330)
T ss_pred HHH-------HHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHH
Confidence 000 111236788899999999999999999988887765 356899999999999987 4 4577
Q ss_pred HHHHHHHccc
Q 019314 329 AIIKALLLGE 338 (343)
Q Consensus 329 ~~i~~fl~~~ 338 (343)
+.|.+||++.
T Consensus 320 ~~i~~fl~~~ 329 (330)
T PRK10749 320 NAIVDFFNRH 329 (330)
T ss_pred HHHHHHHhhc
Confidence 7788888764
No 19
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=2.4e-32 Score=231.88 Aligned_cols=274 Identities=14% Similarity=0.022 Sum_probs=163.6
Q ss_pred eeeecCccEEEEEeccCCCCCCeEEEecCCCCCcc------------cchhhhhhhhhhH---HHHhHcCcEEEEecCCC
Q 019314 35 LLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVG------------SLNFTVLACLSFQ---EVVDELGIYIVSFDRPG 99 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~------------~~~~~~~~~~~~~---~l~~~~g~~vi~~D~~G 99 (343)
.....++.+++|...|+ +++++||+||+.++.. . |.+++ . .|..+ +|+||++|+||
T Consensus 39 ~~~~~~~~~l~y~~~G~--~~~p~vll~g~~~~~~~~~~~~~~~~~~~-----w~~~v-~~~~~L~~~-~~~Vi~~Dl~G 109 (343)
T PRK08775 39 RHAGLEDLRLRYELIGP--AGAPVVFVAGGISAHRHVAATATFPEKGW-----WEGLV-GSGRALDPA-RFRLLAFDFIG 109 (343)
T ss_pred cCCCCCCceEEEEEecc--CCCCEEEEecCCCcccccccccCCCCCCc-----chhcc-CCCCccCcc-ccEEEEEeCCC
Confidence 44556899999999985 2446777777666655 5 77776 6 35333 69999999999
Q ss_pred cccCCCCCCccHHHHHHHHHHHHHHhCCCCe-EEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccc-hH
Q 019314 100 YGESDPDPKRTRKSLALDIEELADQLGLGSK-FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANL-TK 177 (343)
Q Consensus 100 ~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~-~~ 177 (343)
||.|. ...++..++++|+.++++++++ ++ ++|+||||||++|+.+|.++|++|+++|++++.... .+... ..
T Consensus 110 ~g~s~-~~~~~~~~~a~dl~~ll~~l~l-~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~----~~~~~~~~ 183 (343)
T PRK08775 110 ADGSL-DVPIDTADQADAIALLLDALGI-ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRA----HPYAAAWR 183 (343)
T ss_pred CCCCC-CCCCCHHHHHHHHHHHHHHcCC-CcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccC----CHHHHHHH
Confidence 99885 3457889999999999999999 46 579999999999999999999999999999986321 01000 00
Q ss_pred HHHhh---cccc---chHHHHHhhhc--hHHHh-hhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhh
Q 019314 178 EAYYL---QLPQ---DQWALRVAHYA--PWLAY-WWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQG 248 (343)
Q Consensus 178 ~~~~~---~~~~---~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
..... .... ........... ..... ...... +.. ...................... ......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~l~~~~~--~~~~~~ 254 (343)
T PRK08775 184 ALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEER-FDA------PPEVINGRVRVAAEDYLDAAGA--QYVART 254 (343)
T ss_pred HHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHH-hCC------CccccCCCccchHHHHHHHHHH--HHHHhc
Confidence 00000 0000 00000000000 00000 000000 000 0000000000000000000000 000000
Q ss_pred chhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcC-CCceEEEcCC-CCCccccC-cc
Q 019314 249 VHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL-PWIRYHEIPG-SGHLIADA-DG 325 (343)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~-~gH~~~~e-p~ 325 (343)
....+...... .. .....+++|++|+|+|+|++|.++|++..+.+.+.+ |+++++++++ +||.++.| |+
T Consensus 255 ~~~~~~~~~~~-~~-------~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe 326 (343)
T PRK08775 255 PVNAYLRLSES-ID-------LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETD 326 (343)
T ss_pred ChhHHHHHHHH-Hh-------hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHH
Confidence 00000000000 00 001126789999999999999999999999999887 6999999985 99999997 99
Q ss_pred hHHHHHHHHHccccc
Q 019314 326 MTEAIIKALLLGEKV 340 (343)
Q Consensus 326 ~~~~~i~~fl~~~~~ 340 (343)
.|++.|.+||++...
T Consensus 327 ~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 327 RIDAILTTALRSTGE 341 (343)
T ss_pred HHHHHHHHHHHhccc
Confidence 999999999987654
No 20
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=9.4e-32 Score=220.36 Aligned_cols=251 Identities=16% Similarity=0.205 Sum_probs=162.3
Q ss_pred EEEEeccCC-CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCC--CCccHHHHHHHHHH
Q 019314 44 LKFLNSIEY-PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPD--PKRTRKSLALDIEE 120 (343)
Q Consensus 44 l~y~~~g~~-~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~--~~~~~~~~~~di~~ 120 (343)
++|...|++ +++|+||++||+++++.. |..++ +.+.+ +|+|+++|+||||.|+.. ..++++++++++.+
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~-----~~~~~-~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 72 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSY-----WAPQL-DVLTQ--RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQ 72 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhH-----HHHHH-HHHHh--ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHH
Confidence 467777752 357899999999999999 88886 77764 799999999999999754 34699999999999
Q ss_pred HHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhh-chH
Q 019314 121 LADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHY-APW 199 (343)
Q Consensus 121 ~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 199 (343)
+++.++. ++++++||||||.+++.++.++|++|+++|++++.... ... ....+... ...+... ...
T Consensus 73 ~i~~~~~-~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~-----~~~-~~~~~~~~------~~~~~~~~~~~ 139 (257)
T TIGR03611 73 LLDALNI-ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRP-----DPH-TRRCFDVR------IALLQHAGPEA 139 (257)
T ss_pred HHHHhCC-CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCC-----Chh-HHHHHHHH------HHHHhccCcch
Confidence 9999998 79999999999999999999999999999999975321 000 00000000 0000000 000
Q ss_pred HHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCC
Q 019314 200 LAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSE 279 (343)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 279 (343)
..... ....+..... ................. ......+.... .... ..+....+.+++
T Consensus 140 ~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~-~~~~-----~~~~~~~~~~i~ 198 (257)
T TIGR03611 140 YVHAQ-ALFLYPADWI-SENAARLAADEAHALAH-------------FPGKANVLRRI-NALE-----AFDVSARLDRIQ 198 (257)
T ss_pred hhhhh-hhhhccccHh-hccchhhhhhhhhcccc-------------cCccHHHHHHH-HHHH-----cCCcHHHhcccC
Confidence 00000 0000000000 00000000000000000 00000000000 0000 002223477889
Q ss_pred CcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 280 GSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 280 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
+|+++++|++|.++|++.++.+.+.+++++++.++++||+++.+ |+++++.|.+||+
T Consensus 199 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 199 HPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred ccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999986 9999999999986
No 21
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=1.3e-31 Score=221.64 Aligned_cols=258 Identities=14% Similarity=0.148 Sum_probs=162.3
Q ss_pred eeeecCccEEEEEeccCC-CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC--ccH
Q 019314 35 LLQQTSHQYLKFLNSIEY-PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK--RTR 111 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~-~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~ 111 (343)
.+...||.+++|..+-+. ..++.|+++||++.++.. |..++ +.|.+. ||+|+++|+||||.|++... .++
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~-----~~~~~-~~l~~~-g~~via~D~~G~G~S~~~~~~~~~~ 76 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGR-----YEELA-ENISSL-GILVFSHDHIGHGRSNGEKMMIDDF 76 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccch-----HHHHH-HHHHhC-CCEEEEccCCCCCCCCCccCCcCCH
Confidence 556779999999887663 345667777999999999 99987 888766 89999999999999975432 356
Q ss_pred HHHHHHHHHHHHHh----CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccc
Q 019314 112 KSLALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQD 187 (343)
Q Consensus 112 ~~~~~di~~~l~~l----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
.++++|+.+.++.+ .. .+++|+||||||.+|+.+|.++|++++++|+++|..... ..+ ......
T Consensus 77 ~~~~~d~~~~l~~~~~~~~~-~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~--~~~---~~~~~~------ 144 (276)
T PHA02857 77 GVYVRDVVQHVVTIKSTYPG-VPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAE--AVP---RLNLLA------ 144 (276)
T ss_pred HHHHHHHHHHHHHHHhhCCC-CCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccc--ccc---HHHHHH------
Confidence 66777777777654 33 589999999999999999999999999999999864310 000 000000
Q ss_pred hHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCC
Q 019314 188 QWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFD 267 (343)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
.. ............. ..+........+. .....++.. ........+........
T Consensus 145 -------~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~------ 198 (276)
T PHA02857 145 -------AK---LMGIFYPNKIVGK-----LCPESVSRDMDEV-YKYQYDPLV----NHEKIKAGFASQVLKAT------ 198 (276)
T ss_pred -------HH---HHHHhCCCCccCC-----CCHhhccCCHHHH-HHHhcCCCc----cCCCccHHHHHHHHHHH------
Confidence 00 0000000000000 0000000000000 000000000 00000000000000000
Q ss_pred CCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcC-CCceEEEcCCCCCccccC-c---chHHHHHHHHHccc
Q 019314 268 PMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL-PWIRYHEIPGSGHLIADA-D---GMTEAIIKALLLGE 338 (343)
Q Consensus 268 ~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e-p---~~~~~~i~~fl~~~ 338 (343)
.+....++++++|+|+++|++|.++|++.++.+.+.+ +++++.+++++||.++.| + +++.+.+.+||++.
T Consensus 199 -~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 199 -NKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred -HHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 0112237889999999999999999999999998877 468999999999999986 4 46788888999874
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=3.8e-31 Score=215.79 Aligned_cols=248 Identities=18% Similarity=0.200 Sum_probs=164.6
Q ss_pred EEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-CccHHHHHHHHHHHH
Q 019314 44 LKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLALDIEELA 122 (343)
Q Consensus 44 l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~di~~~l 122 (343)
++|...|+++++|+||++||++.+... |.+++ +.|.+ ||+|+++|+||+|.|+... .++++++++++.+++
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~-----~~~~~-~~l~~--~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i 73 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRM-----WDPVL-PALTP--DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALL 73 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhh-----HHHHH-HHhhc--ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 678888875567899999999999999 98886 77754 7999999999999997543 469999999999999
Q ss_pred HHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHh
Q 019314 123 DQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAY 202 (343)
Q Consensus 123 ~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (343)
+.++. ++++++|||+||.+++.+|.++|++|+++|++++...... + ............ .. ..........
T Consensus 74 ~~~~~-~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~---~-~~~~~~~~~~~~-~~----~~~~~~~~~~ 143 (251)
T TIGR02427 74 DHLGI-ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGT---P-ESWNARIAAVRA-EG----LAALADAVLE 143 (251)
T ss_pred HHhCC-CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCc---h-hhHHHHHhhhhh-cc----HHHHHHHHHH
Confidence 99998 6999999999999999999999999999999987532110 0 000000000000 00 0000000000
Q ss_pred hhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcE
Q 019314 203 WWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSV 282 (343)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 282 (343)
.+....+. . ......+.+....... ....+.... .. ....+....++++++|+
T Consensus 144 ~~~~~~~~---------~--~~~~~~~~~~~~~~~~----------~~~~~~~~~-~~-----~~~~~~~~~~~~~~~Pv 196 (251)
T TIGR02427 144 RWFTPGFR---------E--AHPARLDLYRNMLVRQ----------PPDGYAGCC-AA-----IRDADFRDRLGAIAVPT 196 (251)
T ss_pred HHcccccc---------c--CChHHHHHHHHHHHhc----------CHHHHHHHH-HH-----HhcccHHHHhhhcCCCe
Confidence 00000000 0 0000000111000000 000000000 00 00112223467889999
Q ss_pred EEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 283 HLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 283 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
++++|++|.++|.+..+.+.+.+++.++++++++||+++.+ |+.+.+.+.+|++
T Consensus 197 lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 197 LCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred EEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999997 9999999999974
No 23
>PRK07581 hypothetical protein; Validated
Probab=99.98 E-value=1.5e-31 Score=227.20 Aligned_cols=281 Identities=16% Similarity=0.106 Sum_probs=157.5
Q ss_pred ecCccEEEEEeccCC--CCCCeEEEecCCCCCcccchhhhhhhhh--hHHHHhHcCcEEEEecCCCcccCCCCC----Cc
Q 019314 38 QTSHQYLKFLNSIEY--PTSLLHLNFHLFNGCVGSLNFTVLACLS--FQEVVDELGIYIVSFDRPGYGESDPDP----KR 109 (343)
Q Consensus 38 ~~~~~~l~y~~~g~~--~~~~~vv~ihG~~~~~~~~~~~~~~~~~--~~~l~~~~g~~vi~~D~~G~G~S~~~~----~~ 109 (343)
..+|.+++|...|+. .+.|+||++||++++... |..++ .+.|... +|+||++|+||||.|+.+. .+
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~-----~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~ 95 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQD-----NEWLIGPGRALDPE-KYFIIIPNMFGNGLSSSPSNTPAPF 95 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCccc-----chhhccCCCccCcC-ceEEEEecCCCCCCCCCCCCCCCCC
Confidence 357889999999962 234567777777777777 54321 0245433 6999999999999997543 23
Q ss_pred cHHH-----HHHHHHH----HHHHhCCCCe-EEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccc-hHH
Q 019314 110 TRKS-----LALDIEE----LADQLGLGSK-FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANL-TKE 178 (343)
Q Consensus 110 ~~~~-----~~~di~~----~l~~l~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~-~~~ 178 (343)
++++ +++|+.+ +++++++ ++ ++||||||||++|+.+|.+||++|+++|++++.... .+... ...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~~lgi-~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~----~~~~~~~~~ 170 (339)
T PRK07581 96 NAARFPHVTIYDNVRAQHRLLTEKFGI-ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKT----TPHNFVFLE 170 (339)
T ss_pred CCCCCCceeHHHHHHHHHHHHHHHhCC-CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCC----CHHHHHHHH
Confidence 4332 4556554 7788999 68 589999999999999999999999999999875321 00000 000
Q ss_pred HHhhcc-ccchH---------HHHHhhhchHHHhhhhccCCCCcchhcccCccccchhh-hhhhhHHHHHHHHHHHhhhh
Q 019314 179 AYYLQL-PQDQW---------ALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQD-VQLMPKLAVRQINRAQVIQQ 247 (343)
Q Consensus 179 ~~~~~~-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 247 (343)
...... ....+ ...................++.... ........ .+.+........ ......
T Consensus 171 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 243 (339)
T PRK07581 171 GLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQEL-----WRAMGYASLEDFLVGFWEGNF--LPRDPN 243 (339)
T ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhh-----ccccChhhHHHHHHHHHHHhh--cccCcc
Confidence 000000 00000 0000000000000000000000000 00000000 000000000000 000000
Q ss_pred hchhhhHHHHHhccCCCCCC--CCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCC-CCCccccC-
Q 019314 248 GVHESLFRDMMIGFGTWEFD--PMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPG-SGHLIADA- 323 (343)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e- 323 (343)
.. .......... ...... ..+....+++|++|+|+|+|++|..+|++..+.+++.+|+++++++++ +||+++.|
T Consensus 244 ~~-~~~l~~~~~~-~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~ 321 (339)
T PRK07581 244 NL-LAMLWTWQRG-DISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQ 321 (339)
T ss_pred cH-HHHHHHhhhc-ccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccC
Confidence 00 0000000000 000000 012333477899999999999999999999999999999999999999 99999997
Q ss_pred cchHHHHHHHHHccc
Q 019314 324 DGMTEAIIKALLLGE 338 (343)
Q Consensus 324 p~~~~~~i~~fl~~~ 338 (343)
++.+.+.|.+|+++.
T Consensus 322 ~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 322 NPADIAFIDAALKEL 336 (339)
T ss_pred cHHHHHHHHHHHHHH
Confidence 999999999999864
No 24
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.98 E-value=3.7e-31 Score=219.21 Aligned_cols=270 Identities=20% Similarity=0.206 Sum_probs=164.8
Q ss_pred EEEEEeccCC--------CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCC-CC--CccH
Q 019314 43 YLKFLNSIEY--------PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDP-DP--KRTR 111 (343)
Q Consensus 43 ~l~y~~~g~~--------~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~-~~--~~~~ 111 (343)
.+.....|.. .++++||++||++++... |+.++ ..|.+..|++|+++|++|+|.++. +. .++.
T Consensus 38 ~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~-----w~~~~-~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~ 111 (326)
T KOG1454|consen 38 TIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFS-----WRRVV-PLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTL 111 (326)
T ss_pred eeEEEEeccceeccCCCCCCCCcEEEeccccCCccc-----Hhhhc-cccccccceEEEEEecCCCCcCCCCCCCCceeh
Confidence 5555555543 368999999999999999 99998 889887779999999999995543 22 3799
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeE---EEcccccccCCCCCccchHHHHhhccccch
Q 019314 112 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAA---LIAPVINYWWPGFPANLTKEAYYLQLPQDQ 188 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~li---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (343)
.++++.+..++..... ++++++|||+||.+|+.+|+.+|+.|++++ ++++.....-. .................
T Consensus 112 ~~~v~~i~~~~~~~~~-~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 188 (326)
T KOG1454|consen 112 RELVELIRRFVKEVFV-EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPK--GIKGLRRLLDKFLSALE 188 (326)
T ss_pred hHHHHHHHHHHHhhcC-cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCc--chhHHHHhhhhhccHhh
Confidence 9999999999999988 789999999999999999999999999999 55553221000 00000011110110000
Q ss_pred HHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccC-CCCCC
Q 019314 189 WALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFG-TWEFD 267 (343)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 267 (343)
.........+.. .+ ...................+.....+.. + ......++....+. .....
T Consensus 189 ~~~p~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----------~~~~~~~~~~~~~~~~~~~~ 251 (326)
T KOG1454|consen 189 LLIPLSLTEPVR--LV-SEGLLRCLKVVYTDPSRLLEKLLHLLSR----P----------VKEHFHRDARLSLFLELLGF 251 (326)
T ss_pred hcCccccccchh--he-eHhhhcceeeeccccccchhhhhhheec----c----------cccchhhhheeeEEEeccCc
Confidence 000000000000 00 0000000000000000000000000000 0 00000011000000 00000
Q ss_pred CCCCCCCCCCCC-CcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHccc
Q 019314 268 PMDLENPFPNSE-GSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGE 338 (343)
Q Consensus 268 ~~~~~~~~~~i~-~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~ 338 (343)
.......++++. ||+|+++|++|+++|.+.+..+.+.+||+++++++++||.++.| |+++++.|..|+...
T Consensus 252 ~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 252 DENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred cchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 012222366777 99999999999999999999999999999999999999999998 999999999999864
No 25
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.2e-30 Score=220.91 Aligned_cols=266 Identities=14% Similarity=0.090 Sum_probs=161.4
Q ss_pred eeeeecCccEEEEEeccCC---CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC--
Q 019314 34 LLLQQTSHQYLKFLNSIEY---PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK-- 108 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g~~---~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-- 108 (343)
..+...||.+++|+.+++. +.+++|||+||++.+. .|. |..++ ..|.++ ||+|+++|+||||.|+....
T Consensus 35 ~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~-~~~---~~~~~-~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~ 108 (330)
T PLN02298 35 SFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDI-SWT---FQSTA-IFLAQM-GFACFALDLEGHGRSEGLRAYV 108 (330)
T ss_pred ceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCc-cee---hhHHH-HHHHhC-CCEEEEecCCCCCCCCCccccC
Confidence 3677789999999887653 2356799999998654 211 44554 566655 99999999999999975443
Q ss_pred ccHHHHHHHHHHHHHHhCC-----CCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhc
Q 019314 109 RTRKSLALDIEELADQLGL-----GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQ 183 (343)
Q Consensus 109 ~~~~~~~~di~~~l~~l~~-----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
.+++++++|+.++++.+.. +.+++|+||||||.+++.++.++|++|+++|+++|....... .........
T Consensus 109 ~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~---- 183 (330)
T PLN02298 109 PNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDK-IRPPWPIPQ---- 183 (330)
T ss_pred CCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcc-cCCchHHHH----
Confidence 4889999999999998853 137999999999999999999999999999999986432110 000000000
Q ss_pred cccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCC
Q 019314 184 LPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGT 263 (343)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (343)
.........+.. ......... ......... ......... ............... ....
T Consensus 184 -----~~~~~~~~~~~~-------~~~~~~~~~---~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~- 241 (330)
T PLN02298 184 -----ILTFVARFLPTL-------AIVPTADLL---EKSVKVPAK---KIIAKRNPM--RYNGKPRLGTVVELL-RVTD- 241 (330)
T ss_pred -----HHHHHHHHCCCC-------ccccCCCcc---cccccCHHH---HHHHHhCcc--ccCCCccHHHHHHHH-HHHH-
Confidence 000000000000 000000000 000000000 000000000 000000000000000 0000
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCC--CceEEEcCCCCCccccC-cc----hHHHHHHHHHc
Q 019314 264 WEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP--WIRYHEIPGSGHLIADA-DG----MTEAIIKALLL 336 (343)
Q Consensus 264 ~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e-p~----~~~~~i~~fl~ 336 (343)
.+...++++++|+|+|+|++|.++|++.++.+.+.++ ++++++++++||.++.+ |+ .+.+.+.+||.
T Consensus 242 ------~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~ 315 (330)
T PLN02298 242 ------YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLN 315 (330)
T ss_pred ------HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHH
Confidence 1122377889999999999999999999999888764 78999999999999985 65 46677788886
Q ss_pred cc
Q 019314 337 GE 338 (343)
Q Consensus 337 ~~ 338 (343)
+.
T Consensus 316 ~~ 317 (330)
T PLN02298 316 ER 317 (330)
T ss_pred Hh
Confidence 54
No 26
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=6.1e-31 Score=213.47 Aligned_cols=237 Identities=14% Similarity=0.124 Sum_probs=147.3
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVV 134 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lv 134 (343)
+|+|||+||++++... |++++ +.| + +|+|+++|+||||.|+.+...+++++++|+.++++.+++ ++++++
T Consensus 2 ~p~vvllHG~~~~~~~-----w~~~~-~~l-~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lv 71 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-----WQPVG-EAL-P--DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNI-LPYWLV 71 (242)
T ss_pred CCEEEEECCCCCChHH-----HHHHH-HHc-C--CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCC-CCeEEE
Confidence 6789999999999999 99987 876 3 699999999999999877667999999999999999998 799999
Q ss_pred EecccHHHHHHHHHHhhcc-cceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhh-hchHHHhhhhccCCCCc
Q 019314 135 GFSMGGQVVWSCLKYISHR-LTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAH-YAPWLAYWWNTQKLFPP 212 (343)
Q Consensus 135 G~S~Gg~~a~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 212 (343)
||||||.+|+.+|.++|+. |++++++++... ....... .........+...... ........+.....+.
T Consensus 72 G~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 143 (242)
T PRK11126 72 GYSLGGRIAMYYACQGLAGGLCGLIVEGGNPG-----LQNAEER--QARWQNDRQWAQRFRQEPLEQVLADWYQQPVFA- 143 (242)
T ss_pred EECHHHHHHHHHHHhCCcccccEEEEeCCCCC-----CCCHHHH--HHHHhhhHHHHHHhccCcHHHHHHHHHhcchhh-
Confidence 9999999999999999764 999999987532 1111000 0000000011110000 0000000000000000
Q ss_pred chhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCC
Q 019314 213 SAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRL 292 (343)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~ 292 (343)
.........+.... ................ . ....+....+.++++|+++|+|++|..
T Consensus 144 ---------~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~--~-~~~~~~~~~l~~i~~P~lii~G~~D~~ 201 (242)
T PRK11126 144 ---------SLNAEQRQQLVAKR----------SNNNGAAVAAMLEATS--L-AKQPDLRPALQALTFPFYYLCGERDSK 201 (242)
T ss_pred ---------ccCccHHHHHHHhc----------ccCCHHHHHHHHHhcC--c-ccCCcHHHHhhccCCCeEEEEeCCcch
Confidence 00000000000000 0000000000000000 0 001122234778999999999999986
Q ss_pred CChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHcc
Q 019314 293 VPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 337 (343)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 337 (343)
+. .+++. .++++++++++||+++.| |+++++.|.+|+++
T Consensus 202 ~~-----~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 202 FQ-----ALAQQ-LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred HH-----HHHHH-hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 53 22332 378999999999999998 99999999999975
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=5.1e-30 Score=213.57 Aligned_cols=265 Identities=16% Similarity=0.201 Sum_probs=163.0
Q ss_pred eeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC--C--ccH
Q 019314 36 LQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP--K--RTR 111 (343)
Q Consensus 36 ~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~--~~~ 111 (343)
+.+.++.++.|...+....+++|||+||++++... |.... ..+.++.||+|+++|+||+|.|+.+. . +++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~-----~~~~~-~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~ 79 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHE-----YLENL-RELLKEEGREVIMYDQLGCGYSDQPDDSDELWTI 79 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHH-----HHHHH-HHHHHhcCCEEEEEcCCCCCCCCCCCcccccccH
Confidence 45677888889888754447899999998776655 33332 55555448999999999999998542 2 689
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccch-HHHHhhccccchHH
Q 019314 112 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLT-KEAYYLQLPQDQWA 190 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 190 (343)
+++++++.+++++++. ++++++||||||.+++.+|.++|++++++|++++... .+.... .......... ...
T Consensus 80 ~~~~~~~~~~~~~~~~-~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~-----~~~~~~~~~~~~~~~~~-~~~ 152 (288)
T TIGR01250 80 DYFVDELEEVREKLGL-DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDS-----APEYVKELNRLRKELPP-EVR 152 (288)
T ss_pred HHHHHHHHHHHHHcCC-CcEEEEEeehHHHHHHHHHHhCccccceeeEeccccc-----chHHHHHHHHHHhhcCh-hHH
Confidence 9999999999999998 6899999999999999999999999999999987532 111000 0000000000 000
Q ss_pred HHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHH--------HHHHhhhhhchhhhHHHHHhccC
Q 019314 191 LRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQI--------NRAQVIQQGVHESLFRDMMIGFG 262 (343)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 262 (343)
.... .... ...+ ................. ....... ........... ...
T Consensus 153 ~~~~-------~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~ 210 (288)
T TIGR01250 153 AAIK-------RCEA-SGDY------------DNPEYQEAVEVFYHHLLCRTRKWPEALKHLKS-GMNTNVYNIMQ-GPN 210 (288)
T ss_pred HHHH-------HHHh-ccCc------------chHHHHHHHHHHHHHhhcccccchHHHHHHhh-ccCHHHHhccc-CCc
Confidence 0000 0000 0000 00000000000000000 0000000 00000000000 000
Q ss_pred CC----CCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 263 TW----EFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 263 ~~----~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
.+ .....+....++++++|+++++|++|.+ +++..+.+.+.++++++++++++||+++.| |+++++.|.+|++
T Consensus 211 ~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 211 EFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 00 0011123334778999999999999985 567888899999999999999999999997 9999999999985
No 28
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=8e-31 Score=223.26 Aligned_cols=285 Identities=18% Similarity=0.133 Sum_probs=162.9
Q ss_pred ecCccEEEEEeccC--CCCCCeEEEecCCCCCcccc-hhh-----hhhhhhhH---HHHhHcCcEEEEecCCC--cccCC
Q 019314 38 QTSHQYLKFLNSIE--YPTSLLHLNFHLFNGCVGSL-NFT-----VLACLSFQ---EVVDELGIYIVSFDRPG--YGESD 104 (343)
Q Consensus 38 ~~~~~~l~y~~~g~--~~~~~~vv~ihG~~~~~~~~-~~~-----~~~~~~~~---~l~~~~g~~vi~~D~~G--~G~S~ 104 (343)
..+|.+++|..+|+ ..++++|||+||++++.... +.. .|..++ . .|..+ +|+|+++|+|| ||.|.
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~-~~~~~l~~~-~~~vi~~D~~G~~~g~s~ 89 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLI-GPGRAIDTD-RYFVVCSNVLGGCYGSTG 89 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhcc-CCCCCcCCC-ceEEEEecCCCCCCCCCC
Confidence 46789999999995 23468999999999976320 000 155552 2 44344 79999999999 55554
Q ss_pred CC-------------CCccHHHHHHHHHHHHHHhCCCCe-EEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCC
Q 019314 105 PD-------------PKRTRKSLALDIEELADQLGLGSK-FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPG 170 (343)
Q Consensus 105 ~~-------------~~~~~~~~~~di~~~l~~l~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~ 170 (343)
+. ..++++++++++.++++++++ ++ ++++||||||++++.+|.++|++|+++|++++....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~---- 164 (351)
T TIGR01392 90 PSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGI-EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH---- 164 (351)
T ss_pred CCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCC-CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC----
Confidence 21 136899999999999999999 67 999999999999999999999999999999986431
Q ss_pred CCccc--hHHHHhhcc-ccch-------------HHHHHhhhchHHH--hhhhccCCCCcchhcccCccc--cchhhhhh
Q 019314 171 FPANL--TKEAYYLQL-PQDQ-------------WALRVAHYAPWLA--YWWNTQKLFPPSAVVARRPEI--FSAQDVQL 230 (343)
Q Consensus 171 ~~~~~--~~~~~~~~~-~~~~-------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 230 (343)
.... ......... .... ............. ........+.........+.. ......+.
T Consensus 165 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 243 (351)
T TIGR01392 165 -SAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVES 243 (351)
T ss_pred -CHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHH
Confidence 1100 000000000 0000 0000000000000 000000000000000000000 00000000
Q ss_pred hhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCC--CCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCc
Q 019314 231 MPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFD--PMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWI 308 (343)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~ 308 (343)
+....... ...... ...+. ........+... ..++...+++|++|+|+|+|++|.++|++.++.+++.+|++
T Consensus 244 ~~~~~~~~----~~~~~d-~~~~~-~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~ 317 (351)
T TIGR01392 244 YLRYQGDK----FVDRFD-ANSYL-YLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAA 317 (351)
T ss_pred HHHHHHHH----HHhhcC-cchHH-HHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhc
Confidence 00000000 000000 00000 000001111110 01233458899999999999999999999999999999988
Q ss_pred eEE-----EcCCCCCccccC-cchHHHHHHHHHc
Q 019314 309 RYH-----EIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 309 ~~~-----~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
+++ +++++||.++.| |+.+++.|.+||+
T Consensus 318 ~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 318 GLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 765 567999999997 9999999999985
No 29
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=5.7e-30 Score=209.71 Aligned_cols=261 Identities=13% Similarity=0.057 Sum_probs=160.9
Q ss_pred cCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC--CccHHHHHH
Q 019314 39 TSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP--KRTRKSLAL 116 (343)
Q Consensus 39 ~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~ 116 (343)
.+|.+++|.+- .+++|+|||+||++.+... |.+++ ..|.++ ||+|+++|+||||.|...+ ..+++++++
T Consensus 4 ~~~~~~~~~~~--~~~~p~vvliHG~~~~~~~-----w~~~~-~~L~~~-g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~ 74 (273)
T PLN02211 4 ENGEEVTDMKP--NRQPPHFVLIHGISGGSWC-----WYKIR-CLMENS-GYKVTCIDLKSAGIDQSDADSVTTFDEYNK 74 (273)
T ss_pred ccccccccccc--cCCCCeEEEECCCCCCcCc-----HHHHH-HHHHhC-CCEEEEecccCCCCCCCCcccCCCHHHHHH
Confidence 46788888773 2357899999999999999 99987 777655 8999999999999886433 269999999
Q ss_pred HHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhh
Q 019314 117 DIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHY 196 (343)
Q Consensus 117 di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (343)
++.++++.++..++++|+||||||.++..++.++|++|+++|++++.... ........+...... . ......
T Consensus 75 ~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~-----~g~~~~~~~~~~~~~--~-~~~~~~ 146 (273)
T PLN02211 75 PLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK-----LGFQTDEDMKDGVPD--L-SEFGDV 146 (273)
T ss_pred HHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCC-----CCCCHHHHHhccccc--h-hhhccc
Confidence 99999999852269999999999999999999999999999999875220 000000000000000 0 000000
Q ss_pred chHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCC-CCCCCCCCCCC
Q 019314 197 APWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTW-EFDPMDLENPF 275 (343)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 275 (343)
.+ ..+... ............+ ....+......... ....... ...... .+.........
T Consensus 147 ~~--------~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~ 206 (273)
T PLN02211 147 YE--------LGFGLG-PDQPPTSAIIKKE---FRRKILYQMSPQED-------STLAAML-LRPGPILALRSARFEEET 206 (273)
T ss_pred ee--------eeeccC-CCCCCceeeeCHH---HHHHHHhcCCCHHH-------HHHHHHh-cCCcCccccccccccccc
Confidence 00 000000 0000000000000 00000000000000 0000000 000000 00001111123
Q ss_pred CCC-CCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHcc
Q 019314 276 PNS-EGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 337 (343)
Q Consensus 276 ~~i-~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 337 (343)
+++ ++|+++|.|++|..+|++.++.+.+.+++++++.++ +||.++++ |++++++|.++...
T Consensus 207 ~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 207 GDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred cccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 345 789999999999999999999999999999999997 89999997 99999999988654
No 30
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1.1e-30 Score=223.81 Aligned_cols=291 Identities=17% Similarity=0.057 Sum_probs=164.4
Q ss_pred ecCccEEEEEeccCC--CCCCeEEEecCCCCCcccchhh--------hhhhhhhH---HHHhHcCcEEEEecCCCc-ccC
Q 019314 38 QTSHQYLKFLNSIEY--PTSLLHLNFHLFNGCVGSLNFT--------VLACLSFQ---EVVDELGIYIVSFDRPGY-GES 103 (343)
Q Consensus 38 ~~~~~~l~y~~~g~~--~~~~~vv~ihG~~~~~~~~~~~--------~~~~~~~~---~l~~~~g~~vi~~D~~G~-G~S 103 (343)
..+|.+++|..+|.. .++|+|||+||++++...+... .|..++ . .+..+ +|+||++|++|+ |.|
T Consensus 29 ~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~-~~~~~l~~~-~~~vi~~Dl~G~~~~s 106 (379)
T PRK00175 29 VLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMV-GPGKPIDTD-RYFVICSNVLGGCKGS 106 (379)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhcc-CCCCccCcc-ceEEEeccCCCCCCCC
Confidence 357788999999952 2368999999999999862110 144442 2 23233 799999999993 544
Q ss_pred CCC---------------CCccHHHHHHHHHHHHHHhCCCCe-EEEEEecccHHHHHHHHHHhhcccceeEEEccccccc
Q 019314 104 DPD---------------PKRTRKSLALDIEELADQLGLGSK-FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYW 167 (343)
Q Consensus 104 ~~~---------------~~~~~~~~~~di~~~l~~l~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 167 (343)
+.+ +.++++++++++.++++++++ ++ ++++||||||.+++.+|.++|++|+++|++++.....
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 185 (379)
T PRK00175 107 TGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGI-TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLS 185 (379)
T ss_pred CCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCC-CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccC
Confidence 321 146899999999999999999 57 5999999999999999999999999999999864311
Q ss_pred CCCCCccchHHHHhhcccc-------------ch-HHHHHhhhch--HHHhhhhccCCCCcchhcccCc-cccchhhhhh
Q 019314 168 WPGFPANLTKEAYYLQLPQ-------------DQ-WALRVAHYAP--WLAYWWNTQKLFPPSAVVARRP-EIFSAQDVQL 230 (343)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 230 (343)
.. ............... .. ......+... ...........+...... ... .... ....
T Consensus 186 ~~--~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~-~~~~~~~~--~~~~ 260 (379)
T PRK00175 186 AQ--NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQS-GELPFGFD--VEFQ 260 (379)
T ss_pred HH--HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccc-cccccCCC--ccch
Confidence 00 000000000000000 00 0000000000 000000000001000000 000 0000 0000
Q ss_pred hhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCC---CCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCC
Q 019314 231 MPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDP---MDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPW 307 (343)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~ 307 (343)
...+..... ...........+.. .......+.... .++...+++|++|+|+|+|++|.++|++..+.+++.+++
T Consensus 261 ~~~~l~~~~--~~~~~~~d~~~~~~-~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~ 337 (379)
T PRK00175 261 VESYLRYQG--DKFVERFDANSYLY-LTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLA 337 (379)
T ss_pred HHHHHHHHH--HHHhhccCchHHHH-HHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHh
Confidence 000000000 00000000000000 000000000000 123345789999999999999999999999999999988
Q ss_pred c----eEEEcC-CCCCccccC-cchHHHHHHHHHcccc
Q 019314 308 I----RYHEIP-GSGHLIADA-DGMTEAIIKALLLGEK 339 (343)
Q Consensus 308 ~----~~~~~~-~~gH~~~~e-p~~~~~~i~~fl~~~~ 339 (343)
+ ++++++ ++||.++.| |+++++.|.+||++..
T Consensus 338 a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 338 AGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred cCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 7 777775 899999997 9999999999998753
No 31
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=2.8e-30 Score=209.95 Aligned_cols=240 Identities=16% Similarity=0.137 Sum_probs=150.0
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVV 134 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lv 134 (343)
.|+|||+||++++... |..++ +.|.+ +|+|+++|+||+|.|+....++++++++++.+.+ . ++++++
T Consensus 4 ~~~iv~~HG~~~~~~~-----~~~~~-~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~----~-~~~~lv 70 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEV-----FRCLD-EELSA--HFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA----P-DPAIWL 70 (245)
T ss_pred CceEEEEcCCCCchhh-----HHHHH-Hhhcc--CeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC----C-CCeEEE
Confidence 4799999999999999 98887 88865 6999999999999998766678888888776543 2 599999
Q ss_pred EecccHHHHHHHHHHhhcccceeEEEcccccccCCC-CCccchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcc
Q 019314 135 GFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPG-FPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPS 213 (343)
Q Consensus 135 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (343)
||||||.+++.+|.++|++++++|++++........ .+............. ............+.....+
T Consensus 71 G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~--- 141 (245)
T TIGR01738 71 GWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQ------QLSDDYQRTIERFLALQTL--- 141 (245)
T ss_pred EEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHH------HhhhhHHHHHHHHHHHHHh---
Confidence 999999999999999999999999998864321100 000000000000000 0000000000000000000
Q ss_pred hhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCC
Q 019314 214 AVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLV 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~ 293 (343)
...........+...... . .......+...... ....+....++++++|+++++|++|.++
T Consensus 142 ------~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~------~~~~~~~~~l~~i~~Pvlii~g~~D~~~ 202 (245)
T TIGR01738 142 ------GTPTARQDARALKQTLLA------R-PTPNVQVLQAGLEI------LATVDLRQPLQNISVPFLRLYGYLDGLV 202 (245)
T ss_pred ------cCCccchHHHHHHHHhhc------c-CCCCHHHHHHHHHH------hhcccHHHHHhcCCCCEEEEeecCCccc
Confidence 000000000000000000 0 00000000000000 0001222237789999999999999999
Q ss_pred ChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHH
Q 019314 294 PVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALL 335 (343)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl 335 (343)
|.+..+.+.+.++++++++++++||+++.| |+++++.|.+|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 203 PAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 999999999999999999999999999997 999999999986
No 32
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=4.1e-29 Score=200.62 Aligned_cols=223 Identities=24% Similarity=0.327 Sum_probs=146.1
Q ss_pred EEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC---CccHHHHHHHHHHHHHHhCCCCeEEEE
Q 019314 58 HLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP---KRTRKSLALDIEELADQLGLGSKFYVV 134 (343)
Q Consensus 58 vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~di~~~l~~l~~~~~~~lv 134 (343)
|||+||++++... |..++ +.|. + ||+|+++|+||+|.|+... .++++++++|+.++++.++. ++++++
T Consensus 1 vv~~hG~~~~~~~-----~~~~~-~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lv 71 (228)
T PF12697_consen 1 VVFLHGFGGSSES-----WDPLA-EALA-R-GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI-KKVILV 71 (228)
T ss_dssp EEEE-STTTTGGG-----GHHHH-HHHH-T-TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT-SSEEEE
T ss_pred eEEECCCCCCHHH-----HHHHH-HHHh-C-CCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccc-cccccc
Confidence 7999999999999 99987 8885 4 8999999999999998755 46899999999999999998 799999
Q ss_pred EecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcch
Q 019314 135 GFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSA 214 (343)
Q Consensus 135 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (343)
|||+||.+++.++.++|++|+++|++++......... .......+...... .......+... .+
T Consensus 72 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~----~~----- 135 (228)
T PF12697_consen 72 GHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPS-RSFGPSFIRRLLAW------RSRSLRRLASR----FF----- 135 (228)
T ss_dssp EETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHC-HHHHHHHHHHHHHH------HHHHHHHHHHH----HH-----
T ss_pred ccccccccccccccccccccccceeeccccccccccc-ccccchhhhhhhhc------ccccccccccc----cc-----
Confidence 9999999999999999999999999999643100000 00000011100000 00000000000 00
Q ss_pred hcccCccccchhhh-hhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCC
Q 019314 215 VVARRPEIFSAQDV-QLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLV 293 (343)
Q Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~ 293 (343)
......... +.+.. .. .......... .... ++...++++++|+++++|++|.++
T Consensus 136 -----~~~~~~~~~~~~~~~-~~-~~~~~~~~~~----~~~~--------------~~~~~~~~~~~pvl~i~g~~D~~~ 190 (228)
T PF12697_consen 136 -----YRWFDGDEPEDLIRS-SR-RALAEYLRSN----LWQA--------------DLSEALPRIKVPVLVIHGEDDPIV 190 (228)
T ss_dssp -----HHHHTHHHHHHHHHH-HH-HHHHHHHHHH----HHHH--------------HHHHHHHGSSSEEEEEEETTSSSS
T ss_pred -----ccccccccccccccc-cc-cccccccccc----cccc--------------cccccccccCCCeEEeecCCCCCC
Confidence 000000000 00000 00 0000000000 0011 111126677899999999999999
Q ss_pred ChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHH
Q 019314 294 PVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAI 330 (343)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~ 330 (343)
+.+..+.+.+.++++++++++++||+++.| |+++++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 191 PPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred CHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 999999999999999999999999999997 9988763
No 33
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=6.5e-29 Score=197.45 Aligned_cols=104 Identities=19% Similarity=0.263 Sum_probs=92.1
Q ss_pred CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-----CccHHHHHHHHHHHHHHhC
Q 019314 52 YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-----KRTRKSLALDIEELADQLG 126 (343)
Q Consensus 52 ~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-----~~~~~~~~~di~~~l~~l~ 126 (343)
...+.++|+|||++++... |-.-. +.|++ ...|+++|++|+|+|+.+. ......+++-|++.....+
T Consensus 87 ~~~~~plVliHGyGAg~g~-----f~~Nf-~~La~--~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~ 158 (365)
T KOG4409|consen 87 SANKTPLVLIHGYGAGLGL-----FFRNF-DDLAK--IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMG 158 (365)
T ss_pred ccCCCcEEEEeccchhHHH-----HHHhh-hhhhh--cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcC
Confidence 3568999999999999999 66664 89988 4789999999999998654 1255688999999999999
Q ss_pred CCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 127 LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 127 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
+ .+.+|+|||+||.+|..||.+||++|+.|||++|..
T Consensus 159 L-~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~G 195 (365)
T KOG4409|consen 159 L-EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWG 195 (365)
T ss_pred C-cceeEeeccchHHHHHHHHHhChHhhceEEEecccc
Confidence 9 799999999999999999999999999999999974
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.1e-28 Score=212.22 Aligned_cols=267 Identities=15% Similarity=0.139 Sum_probs=152.9
Q ss_pred EEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC-c-c----HHHHHH
Q 019314 43 YLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK-R-T----RKSLAL 116 (343)
Q Consensus 43 ~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-~-~----~~~~~~ 116 (343)
++.+.....+.++|+|||+||++.+... |...+ ..|.+ +|+|+++|+||||.|+.+.. . + .+.+++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~-----~~~~~-~~L~~--~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 164 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGF-----FFRNF-DALAS--RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFID 164 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhH-----HHHHH-HHHHh--CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHH
Confidence 4554444433467999999999998888 87776 88875 59999999999999975432 1 1 224577
Q ss_pred HHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHh--
Q 019314 117 DIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVA-- 194 (343)
Q Consensus 117 di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 194 (343)
++.++++.+++ ++++++||||||.+++.+|.++|++|+++|+++|....... . ........... .+...+.
T Consensus 165 ~i~~~~~~l~~-~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~---~-~~~~~~~~~~~--~~~~~~~~~ 237 (402)
T PLN02894 165 SFEEWRKAKNL-SNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSES---D-DKSEWLTKFRA--TWKGAVLNH 237 (402)
T ss_pred HHHHHHHHcCC-CCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCc---c-hhHHHHhhcch--hHHHHHHHH
Confidence 88888888998 69999999999999999999999999999999985321110 0 00000100000 0000000
Q ss_pred ----------------hhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHH
Q 019314 195 ----------------HYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMM 258 (343)
Q Consensus 195 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (343)
...+.+....... .+.... ....+..+....+..+..... .............
T Consensus 238 ~~~~~~~p~~~~~~~gp~~~~l~~~~~~~-~~~~~~----~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~- 306 (402)
T PLN02894 238 LWESNFTPQKIIRGLGPWGPNLVRRYTTA-RFGAHS----TGDILSEEESKLLTDYVYHTL-----AAKASGELCLKYI- 306 (402)
T ss_pred HhhcCCCHHHHHHhccchhHHHHHHHHHH-Hhhhcc----cccccCcchhhHHHHHHHHhh-----cCCCchHHHHHHh-
Confidence 0000000000000 000000 000011111111111100000 0000000000000
Q ss_pred hccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcC-CCceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 259 IGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL-PWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
..... ....++...+++|++|+++|+|++|.+.+ .....+.+.. +.+++++++++||+++.| |+.|++.+.+|++
T Consensus 307 ~~~~~--~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~ 383 (402)
T PLN02894 307 FSFGA--FARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACR 383 (402)
T ss_pred ccCch--hhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHH
Confidence 00000 01113333478899999999999998776 4444555544 358999999999999998 9999999998876
Q ss_pred cc
Q 019314 337 GE 338 (343)
Q Consensus 337 ~~ 338 (343)
..
T Consensus 384 ~~ 385 (402)
T PLN02894 384 KY 385 (402)
T ss_pred Hh
Confidence 43
No 35
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=8.1e-29 Score=207.20 Aligned_cols=120 Identities=25% Similarity=0.293 Sum_probs=99.9
Q ss_pred eeeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC---CccH
Q 019314 35 LLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP---KRTR 111 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~ 111 (343)
++...+|.+++|...|+ +++++|||+||++++... + .+. ..+... +|+|+++|+||||.|+... .++.
T Consensus 8 ~~~~~~~~~l~y~~~g~-~~~~~lvllHG~~~~~~~-----~-~~~-~~~~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~ 78 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGN-PDGKPVVFLHGGPGSGTD-----P-GCR-RFFDPE-TYRIVLFDQRGCGKSTPHACLEENTT 78 (306)
T ss_pred eEEcCCCcEEEEEECcC-CCCCEEEEECCCCCCCCC-----H-HHH-hccCcc-CCEEEEECCCCCCCCCCCCCcccCCH
Confidence 66677899999999985 346789999998877655 3 121 334333 7999999999999998653 2478
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 112 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
+++++|+..+++++++ ++++++||||||.+++.++.++|++|+++|++++..
T Consensus 79 ~~~~~dl~~l~~~l~~-~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 79 WDLVADIEKLREKLGI-KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 8999999999999998 699999999999999999999999999999998754
No 36
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=1.9e-28 Score=201.22 Aligned_cols=267 Identities=16% Similarity=0.143 Sum_probs=174.4
Q ss_pred eeeeecCccEEEEEeccCCCCC-CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCC-CCCC--c
Q 019314 34 LLLQQTSHQYLKFLNSIEYPTS-LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESD-PDPK--R 109 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g~~~~~-~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~-~~~~--~ 109 (343)
..+...+|..++|..+-...+. .+||++||++.+..- |..++ ..|... ||.|+++|+||||.|. +... .
T Consensus 12 ~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~r-----y~~la-~~l~~~-G~~V~~~D~RGhG~S~r~~rg~~~ 84 (298)
T COG2267 12 GYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGR-----YEELA-DDLAAR-GFDVYALDLRGHGRSPRGQRGHVD 84 (298)
T ss_pred ceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHH-----HHHHH-HHHHhC-CCEEEEecCCCCCCCCCCCcCCch
Confidence 3778899999999998764333 799999999999999 88888 888877 9999999999999997 4333 3
Q ss_pred cHHHHHHHHHHHHHHhC---CCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhcccc
Q 019314 110 TRKSLALDIEELADQLG---LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQ 186 (343)
Q Consensus 110 ~~~~~~~di~~~l~~l~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (343)
+++++.+|+.++++... .+.+++++||||||.+++.++.+++.+|+++||.+|..... .............
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~-----~~~~~~~~~~~~~- 158 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLG-----GAILRLILARLAL- 158 (298)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCC-----hhHHHHHHHHHhc-
Confidence 78999999999999874 24799999999999999999999999999999999985421 1000000000000
Q ss_pred chHHHHHhhhchHHHhhhhccCCCCcchhcc----cCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccC
Q 019314 187 DQWALRVAHYAPWLAYWWNTQKLFPPSAVVA----RRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFG 262 (343)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (343)
.. ...+.+...... .........+.+..+.+..++... .................
T Consensus 159 --------~~---------~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~----~~~~~~~w~~~~~~a~~ 217 (298)
T COG2267 159 --------KL---------LGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIG----VGGPVSRWVDLALLAGR 217 (298)
T ss_pred --------cc---------ccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccc----cCCccHHHHHHHHHhhc
Confidence 00 001111111000 000011111222222222222110 00111111111111000
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEecCCCCCCC-hhHHHHHhhcC--CCceEEEcCCCCCccccC--c--chHHHHHHHHH
Q 019314 263 TWEFDPMDLENPFPNSEGSVHLWQGDEDRLVP-VILQRYISKKL--PWIRYHEIPGSGHLIADA--D--GMTEAIIKALL 335 (343)
Q Consensus 263 ~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~-~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e--p--~~~~~~i~~fl 335 (343)
.......+++++|+|+++|++|.+++ .+...++.+.. +++++++++|+.|.++.| . +.+.+.+.+|+
T Consensus 218 ------~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l 291 (298)
T COG2267 218 ------VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWL 291 (298)
T ss_pred ------ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHH
Confidence 01222366888999999999999999 67776666654 567899999999999997 4 67888888888
Q ss_pred ccccc
Q 019314 336 LGEKV 340 (343)
Q Consensus 336 ~~~~~ 340 (343)
.+...
T Consensus 292 ~~~~~ 296 (298)
T COG2267 292 AEALP 296 (298)
T ss_pred Hhhcc
Confidence 77543
No 37
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=3e-28 Score=198.50 Aligned_cols=245 Identities=21% Similarity=0.232 Sum_probs=153.0
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC---CccHHHHHHH-HHHHHHHhCCCCe
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP---KRTRKSLALD-IEELADQLGLGSK 130 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~d-i~~~l~~l~~~~~ 130 (343)
+|+||++||++++... |.+++ +.|. + ||+|+++|+||+|.|+.+. ..++++.+++ +.++++.++. ++
T Consensus 1 ~~~vv~~hG~~~~~~~-----~~~~~-~~L~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 71 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-----WQALI-ELLG-P-HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGI-EP 71 (251)
T ss_pred CCEEEEEcCCCCchhh-----HHHHH-HHhc-c-cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCC-Ce
Confidence 4789999999999999 99987 8887 3 8999999999999998643 3588899999 7888888887 69
Q ss_pred EEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhh-hchHHHhhhhccCC
Q 019314 131 FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAH-YAPWLAYWWNTQKL 209 (343)
Q Consensus 131 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 209 (343)
++++|||+||.+++.+|.++|++|++++++++.... ........ .......+...+.. ....+...+.....
T Consensus 72 ~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (251)
T TIGR03695 72 FFLVGYSMGGRIALYYALQYPERVQGLILESGSPGL-----ATEEERAA--RRQNDEQLAQRFEQEGLEAFLDDWYQQPL 144 (251)
T ss_pred EEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCc-----CchHhhhh--hhhcchhhhhHHHhcCccHHHHHHhcCce
Confidence 999999999999999999999999999999985331 11110000 00000000000100 00111111111111
Q ss_pred CCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCC
Q 019314 210 FPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDE 289 (343)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~ 289 (343)
+.. ...........+ ..... ......+......... ....+....++++++|+++++|++
T Consensus 145 ~~~-------~~~~~~~~~~~~---~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~l~i~g~~ 204 (251)
T TIGR03695 145 FAS-------QKNLPPEQRQAL---RAKRL-------ANNPEGLAKMLRATGL---GKQPSLWPKLQALTIPVLYLCGEK 204 (251)
T ss_pred eee-------cccCChHHhHHH---HHhcc-------cccchHHHHHHHHhhh---hcccchHHHhhCCCCceEEEeeCc
Confidence 100 000111100000 00000 0000000000000000 000011223678899999999999
Q ss_pred CCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 290 DRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 290 D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
|..++ +..+.+.+..+++++++++++||+++.| |+.+++.|.+|++
T Consensus 205 D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 205 DEKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred chHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 98774 5677788888999999999999999997 9999999999984
No 38
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=2e-28 Score=208.77 Aligned_cols=259 Identities=15% Similarity=0.104 Sum_probs=161.2
Q ss_pred eeecCccEEEEEeccCC--CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC--ccH
Q 019314 36 LQQTSHQYLKFLNSIEY--PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK--RTR 111 (343)
Q Consensus 36 ~~~~~~~~l~y~~~g~~--~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~ 111 (343)
+...++..++|..+.+. +.+++||++||++++... |..++ ..|.+. ||+|+++|+||||.|+.... .+.
T Consensus 115 ~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~-----~~~~a-~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~ 187 (395)
T PLN02652 115 FYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGR-----YLHFA-KQLTSC-GFGVYAMDWIGHGGSDGLHGYVPSL 187 (395)
T ss_pred EECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHH-----HHHHH-HHHHHC-CCEEEEeCCCCCCCCCCCCCCCcCH
Confidence 34456677888877652 345789999999999888 88887 888765 99999999999999987544 378
Q ss_pred HHHHHHHHHHHHHhCC---CCeEEEEEecccHHHHHHHHHHhhc---ccceeEEEcccccccCCCCCccchHHHHhhccc
Q 019314 112 KSLALDIEELADQLGL---GSKFYVVGFSMGGQVVWSCLKYISH---RLTGAALIAPVINYWWPGFPANLTKEAYYLQLP 185 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~---~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
+.+++|+.++++.+.. +.+++++||||||.+++.++. +|+ +++++|+.+|..... +.........
T Consensus 188 ~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~----~~~~~~~~~~---- 258 (395)
T PLN02652 188 DYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVK----PAHPIVGAVA---- 258 (395)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccc----cchHHHHHHH----
Confidence 8899999999998753 137999999999999998764 564 899999999864321 0000000000
Q ss_pred cchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCC
Q 019314 186 QDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWE 265 (343)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
.......+. ..+..... ........ .........++... ................
T Consensus 259 -----~l~~~~~p~--------~~~~~~~~---~~~~~s~~-~~~~~~~~~dp~~~----~g~i~~~~~~~~~~~~---- 313 (395)
T PLN02652 259 -----PIFSLVAPR--------FQFKGANK---RGIPVSRD-PAALLAKYSDPLVY----TGPIRVRTGHEILRIS---- 313 (395)
T ss_pred -----HHHHHhCCC--------CcccCccc---ccCCcCCC-HHHHHHHhcCCCcc----cCCchHHHHHHHHHHH----
Confidence 000000000 00000000 00000000 00000000000000 0000000000000000
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCC--CceEEEcCCCCCccccC--cchHHHHHHHHHccc
Q 019314 266 FDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP--WIRYHEIPGSGHLIADA--DGMTEAIIKALLLGE 338 (343)
Q Consensus 266 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~~~ 338 (343)
..+...+++|++|+|+++|++|.++|++.++.+.+.++ +.+++++++++|.++.| ++++.+.+.+||...
T Consensus 314 ---~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 314 ---SYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred ---HHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 01122378899999999999999999999999988765 47899999999999875 889999999999754
No 39
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.96 E-value=5.9e-29 Score=181.06 Aligned_cols=247 Identities=15% Similarity=0.128 Sum_probs=168.7
Q ss_pred eeeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCc----c
Q 019314 35 LLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKR----T 110 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~----~ 110 (343)
.-..++|.++.|..+|. +...|++++|..++... + |.+.+ ..+.+...+.|+++|.||+|.|.++... -
T Consensus 24 ~kv~vng~ql~y~~~G~--G~~~iLlipGalGs~~t---D-f~pql-~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~f 96 (277)
T KOG2984|consen 24 SKVHVNGTQLGYCKYGH--GPNYILLIPGALGSYKT---D-FPPQL-LSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQF 96 (277)
T ss_pred heeeecCceeeeeecCC--CCceeEecccccccccc---c-CCHHH-HhcCCCCceEEEEECCCCCCCCCCCcccchHHH
Confidence 34568999999999997 34579999998776554 1 77775 7776665689999999999999876642 3
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHH
Q 019314 111 RKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWA 190 (343)
Q Consensus 111 ~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (343)
+..-+++...++++|+. +++.|+|||-||..|+..|+++++.|.++|+.++....+ ....-.++.......|.
T Consensus 97 f~~Da~~avdLM~aLk~-~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn------~~~~ma~kgiRdv~kWs 169 (277)
T KOG2984|consen 97 FMKDAEYAVDLMEALKL-EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVN------HLGAMAFKGIRDVNKWS 169 (277)
T ss_pred HHHhHHHHHHHHHHhCC-CCeeEeeecCCCeEEEEeeccChhhhhhheeecccceec------chhHHHHhchHHHhhhh
Confidence 44556777788899999 899999999999999999999999999999998864321 11111111111111111
Q ss_pred HHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCC
Q 019314 191 LRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMD 270 (343)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
.+. ... ....+. .+.+...... .-|....+.. +-..+
T Consensus 170 ~r~--------------------R~P--~e~~Yg---~e~f~~~wa~----------------wvD~v~qf~~--~~dG~ 206 (277)
T KOG2984|consen 170 ARG--------------------RQP--YEDHYG---PETFRTQWAA----------------WVDVVDQFHS--FCDGR 206 (277)
T ss_pred hhh--------------------cch--HHHhcC---HHHHHHHHHH----------------HHHHHHHHhh--cCCCc
Confidence 100 000 000000 0111111100 0000000000 00001
Q ss_pred -CCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHccc
Q 019314 271 -LENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGE 338 (343)
Q Consensus 271 -~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~ 338 (343)
....+|+++||+|+++|+.|++++...+-.+....+.+++.+.|.++|.+++. +++|++.+.+|+++.
T Consensus 207 fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 207 FCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred hHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 12248999999999999999999999998898999999999999999999997 999999999999864
No 40
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=5.9e-28 Score=208.43 Aligned_cols=255 Identities=20% Similarity=0.272 Sum_probs=162.3
Q ss_pred eecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCC-CCccHHHHH
Q 019314 37 QQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPD-PKRTRKSLA 115 (343)
Q Consensus 37 ~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~ 115 (343)
...++.+++|...|+ ..+++|||+||++++... |..+. ..|.+ +|+|+++|+||||.|... ...++++++
T Consensus 114 ~~~~~~~i~~~~~g~-~~~~~vl~~HG~~~~~~~-----~~~~~-~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~ 184 (371)
T PRK14875 114 ARIGGRTVRYLRLGE-GDGTPVVLIHGFGGDLNN-----WLFNH-AALAA--GRPVIALDLPGHGASSKAVGAGSLDELA 184 (371)
T ss_pred ceEcCcEEEEecccC-CCCCeEEEECCCCCccch-----HHHHH-HHHhc--CCEEEEEcCCCCCCCCCCCCCCCHHHHH
Confidence 455778899998885 347899999999999999 88886 87765 599999999999999643 456899999
Q ss_pred HHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhh
Q 019314 116 LDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAH 195 (343)
Q Consensus 116 ~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (343)
+++.++++.++. .+++++|||+||.+++.+|.++|+++.++|++++.... + .... .+............+.
T Consensus 185 ~~~~~~~~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~-----~-~~~~-~~~~~~~~~~~~~~~~- 255 (371)
T PRK14875 185 AAVLAFLDALGI-ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLG-----P-EING-DYIDGFVAAESRRELK- 255 (371)
T ss_pred HHHHHHHHhcCC-ccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcC-----c-ccch-hHHHHhhcccchhHHH-
Confidence 999999999998 69999999999999999999999999999999875321 1 0000 0000000000000000
Q ss_pred hchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCC
Q 019314 196 YAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPF 275 (343)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (343)
+.+... +. ....................... .....+.... .. ......+....+
T Consensus 256 --~~~~~~-----~~--------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~---~~-~~~~~~~~~~~l 310 (371)
T PRK14875 256 --PVLELL-----FA--------DPALVTRQMVEDLLKYKRLDGVD------DALRALADAL---FA-GGRQRVDLRDRL 310 (371)
T ss_pred --HHHHHH-----hc--------ChhhCCHHHHHHHHHHhccccHH------HHHHHHHHHh---cc-CcccchhHHHHH
Confidence 000000 00 00000000000000000000000 0000000000 00 000001122236
Q ss_pred CCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHcc
Q 019314 276 PNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 337 (343)
Q Consensus 276 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 337 (343)
.++++|+++++|++|.++|.+..+.+. +++++.+++++||+++.+ |+++++.|.+|+++
T Consensus 311 ~~i~~Pvlii~g~~D~~vp~~~~~~l~---~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 311 ASLAIPVLVIWGEQDRIIPAAHAQGLP---DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred hcCCCCEEEEEECCCCccCHHHHhhcc---CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 678999999999999999987665443 468999999999999997 99999999999975
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=1.5e-27 Score=234.64 Aligned_cols=259 Identities=15% Similarity=0.141 Sum_probs=161.9
Q ss_pred EEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC---------CccHHHH
Q 019314 44 LKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP---------KRTRKSL 114 (343)
Q Consensus 44 l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---------~~~~~~~ 114 (343)
++|...|..+.+++|||+||++++... |.+++ ..|.+ +|+|+++|+||||.|+... .++++++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~-----w~~~~-~~L~~--~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~ 1431 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGED-----WIPIM-KAISG--SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELV 1431 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHH-----HHHHH-HHHhC--CCEEEEEcCCCCCCCCCccccccccccccCCHHHH
Confidence 555666754457899999999999999 99987 88865 5999999999999997432 3589999
Q ss_pred HHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHh
Q 019314 115 ALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVA 194 (343)
Q Consensus 115 ~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (343)
++++.+++++++. ++++|+||||||.+++.++.++|++|+++|++++.... ...... ....... ......+.
T Consensus 1432 a~~l~~ll~~l~~-~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~-----~~~~~~-~~~~~~~-~~~~~~l~ 1503 (1655)
T PLN02980 1432 ADLLYKLIEHITP-GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGL-----KDEVAR-KIRSAKD-DSRARMLI 1503 (1655)
T ss_pred HHHHHHHHHHhCC-CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCcc-----CchHHH-HHHhhhh-hHHHHHHH
Confidence 9999999999998 79999999999999999999999999999999875321 111100 0000000 00000000
Q ss_pred h-hchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCC
Q 019314 195 H-YAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLEN 273 (343)
Q Consensus 195 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (343)
. ....+.. .++....... .. ......+......... ........+ ..... ....++..
T Consensus 1504 ~~g~~~~~~-----~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~------~~~~~~~~l-~~~~~------~~~~dl~~ 1562 (1655)
T PLN02980 1504 DHGLEIFLE-----NWYSGELWKS--LR-NHPHFNKIVASRLLHK------DVPSLAKLL-SDLSI------GRQPSLWE 1562 (1655)
T ss_pred hhhHHHHHH-----HhccHHHhhh--hc-cCHHHHHHHHHHHhcC------CHHHHHHHH-HHhhh------cccchHHH
Confidence 0 0000111 1111000000 00 0000000000000000 000000000 00000 00012223
Q ss_pred CCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCC------------ceEEEcCCCCCccccC-cchHHHHHHHHHccccc
Q 019314 274 PFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPW------------IRYHEIPGSGHLIADA-DGMTEAIIKALLLGEKV 340 (343)
Q Consensus 274 ~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~~ 340 (343)
.++++++|+|+|+|++|..++ +.++++.+.+++ +++++++++||.++.| |+.+++.|.+||++...
T Consensus 1563 ~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1563 DLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred HHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccc
Confidence 488999999999999999885 566677777665 4899999999999997 99999999999987643
No 42
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.95 E-value=3.2e-27 Score=184.33 Aligned_cols=264 Identities=16% Similarity=0.127 Sum_probs=173.3
Q ss_pred eeeeecCccEEEEEeccC---CCCCCeEEEecCCCCCc-ccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCc
Q 019314 34 LLLQQTSHQYLKFLNSIE---YPTSLLHLNFHLFNGCV-GSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKR 109 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g~---~~~~~~vv~ihG~~~~~-~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~ 109 (343)
.++.+.+|..+.+..|-+ .+.+..|+++||++... .. +..++ ..|+.. ||.|+++|++|||.|++-..+
T Consensus 30 ~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~-----~~~~a-~~l~~~-g~~v~a~D~~GhG~SdGl~~y 102 (313)
T KOG1455|consen 30 SFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWR-----YQSTA-KRLAKS-GFAVYAIDYEGHGRSDGLHAY 102 (313)
T ss_pred eeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhh-----HHHHH-HHHHhC-CCeEEEeeccCCCcCCCCccc
Confidence 578889999999988866 23456799999999776 55 66676 777766 999999999999999977765
Q ss_pred --cHHHHHHHHHHHHHHhC-----CCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhh
Q 019314 110 --TRKSLALDIEELADQLG-----LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYL 182 (343)
Q Consensus 110 --~~~~~~~di~~~l~~l~-----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
+++..++|+..+.+... .+.+..++||||||.|++.++.++|+..+++|+++|.....-...|.......
T Consensus 103 i~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~--- 179 (313)
T KOG1455|consen 103 VPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISI--- 179 (313)
T ss_pred CCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHH---
Confidence 89999999999988641 13689999999999999999999999999999999986542211122111111
Q ss_pred ccccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHH-HHHhhhhhchhhhHHHHHhcc
Q 019314 183 QLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQIN-RAQVIQQGVHESLFRDMMIGF 261 (343)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 261 (343)
...+....|.+. ..+.... ....+. +.+.......++.. ............++...
T Consensus 180 -------l~~l~~liP~wk-------~vp~~d~---~~~~~k--dp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~---- 236 (313)
T KOG1455|consen 180 -------LTLLSKLIPTWK-------IVPTKDI---IDVAFK--DPEKRKILRSDPLCYTGKPRLKTAYELLRVTA---- 236 (313)
T ss_pred -------HHHHHHhCCcee-------ecCCccc---cccccC--CHHHHHHhhcCCceecCCccHHHHHHHHHHHH----
Confidence 111122222111 0000000 000000 11111111111111 00111111112221111
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCC--CceEEEcCCCCCcccc-C-c---chHHHHHHHH
Q 019314 262 GTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP--WIRYHEIPGSGHLIAD-A-D---GMTEAIIKAL 334 (343)
Q Consensus 262 ~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-e-p---~~~~~~i~~f 334 (343)
++...++++++|.+++||+.|.++.++.++.+.+..+ +.++.+|||.=|.++. | + +.+..-|.+|
T Consensus 237 --------~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~W 308 (313)
T KOG1455|consen 237 --------DLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISW 308 (313)
T ss_pred --------HHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHH
Confidence 4445588999999999999999999999999999875 5789999999999997 6 3 3456667778
Q ss_pred Hccc
Q 019314 335 LLGE 338 (343)
Q Consensus 335 l~~~ 338 (343)
|++.
T Consensus 309 l~~r 312 (313)
T KOG1455|consen 309 LDER 312 (313)
T ss_pred HHhc
Confidence 7653
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.95 E-value=6.3e-27 Score=213.98 Aligned_cols=277 Identities=12% Similarity=0.057 Sum_probs=162.2
Q ss_pred eeeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC---CccH
Q 019314 35 LLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP---KRTR 111 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~ 111 (343)
.+...+|.+++|..+|+ .++|+|||+||++++... |.+++ +.|.+ +|+|+++|+||||.|+.+. .+++
T Consensus 6 ~~~~~~g~~l~~~~~g~-~~~~~ivllHG~~~~~~~-----w~~~~-~~L~~--~~~Vi~~D~~G~G~S~~~~~~~~~~~ 76 (582)
T PRK05855 6 TVVSSDGVRLAVYEWGD-PDRPTVVLVHGYPDNHEV-----WDGVA-PLLAD--RFRVVAYDVRGAGRSSAPKRTAAYTL 76 (582)
T ss_pred EEEeeCCEEEEEEEcCC-CCCCeEEEEcCCCchHHH-----HHHHH-HHhhc--ceEEEEecCCCCCCCCCCCcccccCH
Confidence 56778999999999985 347899999999999999 99987 88743 7999999999999998543 4689
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHH--hhcccceeEEEcccccccCCCCCccchHHHHhhcc---cc
Q 019314 112 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKY--ISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQL---PQ 186 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 186 (343)
+++++|+..++++++.+++++|+||||||.+++.++.+ .++++..++.+++... ........... ..
T Consensus 77 ~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 148 (582)
T PRK05855 77 ARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSL--------DHVGFWLRSGLRRPTP 148 (582)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCch--------HHHHHHHhhcccccch
Confidence 99999999999999874459999999999999988876 2445555555443210 00000000000 00
Q ss_pred chHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHH--HHHHHhhhhhchhhhHHHHHhccCCC
Q 019314 187 DQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQ--INRAQVIQQGVHESLFRDMMIGFGTW 264 (343)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (343)
.......................+....... ................. ................ ....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----- 218 (582)
T PRK05855 149 RRLARALGQLLRSWYIYLFHLPVLPELLWRL----GLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVK-LYRA----- 218 (582)
T ss_pred hhhhHHHHHHhhhHHHHHHhCCCCcHHHhcc----chhhHHHHhhhhccCCCcchhhhhhhhccccchHH-HHHh-----
Confidence 0000000000000000000000000000000 00000000000000000 0000000000000000 0000
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHcccc
Q 019314 265 EFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGEK 339 (343)
Q Consensus 265 ~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~ 339 (343)
.............+++|+++|+|++|.++|.+..+.+.+.+++.++++++ +||+++.| |+.+++.|.+|+.+..
T Consensus 219 ~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 219 NMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred hhhhhhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 00000111225568999999999999999999999999888888888887 69999997 9999999999998643
No 44
>PLN02511 hydrolase
Probab=99.95 E-value=1.6e-26 Score=198.15 Aligned_cols=272 Identities=13% Similarity=0.103 Sum_probs=155.5
Q ss_pred eeeeecCccEEEEEecc-----CCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-
Q 019314 34 LLLQQTSHQYLKFLNSI-----EYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP- 107 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g-----~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~- 107 (343)
..+...||..+.+.... .+.++|+||++||+++++.. .++..++ ..+.++ ||+|+++|+||||.|+...
T Consensus 74 e~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~---~y~~~~~-~~~~~~-g~~vv~~d~rG~G~s~~~~~ 148 (388)
T PLN02511 74 ECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDD---SYVRHML-LRARSK-GWRVVVFNSRGCADSPVTTP 148 (388)
T ss_pred EEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCC---HHHHHHH-HHHHHC-CCEEEEEecCCCCCCCCCCc
Confidence 35667788888764321 12457899999999877643 1134454 555544 9999999999999997532
Q ss_pred CccHHHHHHHHHHHHHHhCC---CCeEEEEEecccHHHHHHHHHHhhcc--cceeEEEcccccccCCCCCccchHHHHhh
Q 019314 108 KRTRKSLALDIEELADQLGL---GSKFYVVGFSMGGQVVWSCLKYISHR--LTGAALIAPVINYWWPGFPANLTKEAYYL 182 (343)
Q Consensus 108 ~~~~~~~~~di~~~l~~l~~---~~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
......+++|+.+++++++. +.+++++||||||.+++.++.++|++ |.+++++++..+. ......+..
T Consensus 149 ~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l-------~~~~~~~~~ 221 (388)
T PLN02511 149 QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL-------VIADEDFHK 221 (388)
T ss_pred CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCH-------HHHHHHHhc
Confidence 23445677888888888753 14899999999999999999999987 8888888764321 000111111
Q ss_pred ccccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHH-HHHHHhhhhhchhhhHHHHHhcc
Q 019314 183 QLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQ-INRAQVIQQGVHESLFRDMMIGF 261 (343)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 261 (343)
... ......+.......... ....+.. ....+............... ..............+..
T Consensus 222 ~~~-~~y~~~~~~~l~~~~~~--~~~~~~~------~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~------ 286 (388)
T PLN02511 222 GFN-NVYDKALAKALRKIFAK--HALLFEG------LGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYS------ 286 (388)
T ss_pred cHH-HHHHHHHHHHHHHHHHH--HHHHHhh------CCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHH------
Confidence 000 00000000000000000 0000000 00000000000000000000 00000000000000100
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHH-HHHhhcCCCceEEEcCCCCCccccC-cch------HHHHHHH
Q 019314 262 GTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQ-RYISKKLPWIRYHEIPGSGHLIADA-DGM------TEAIIKA 333 (343)
Q Consensus 262 ~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~e-p~~------~~~~i~~ 333 (343)
..+....+++|++|+|+|+|++|+++|.+.. ....+..|++++++++++||+.+.| |+. +.+.+.+
T Consensus 287 ------~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~ 360 (388)
T PLN02511 287 ------NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVME 360 (388)
T ss_pred ------HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHH
Confidence 0122334889999999999999999997754 4567788999999999999999998 764 5888888
Q ss_pred HHccc
Q 019314 334 LLLGE 338 (343)
Q Consensus 334 fl~~~ 338 (343)
|++..
T Consensus 361 Fl~~~ 365 (388)
T PLN02511 361 FLEAL 365 (388)
T ss_pred HHHHH
Confidence 88643
No 45
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=5.9e-26 Score=192.86 Aligned_cols=288 Identities=14% Similarity=0.085 Sum_probs=161.7
Q ss_pred cCccEEEEEeccC--CCCCCeEEEecCCCCCcccc--------hhhhhhhhhhHH--HHhHcCcEEEEecCCCcccCCC-
Q 019314 39 TSHQYLKFLNSIE--YPTSLLHLNFHLFNGCVGSL--------NFTVLACLSFQE--VVDELGIYIVSFDRPGYGESDP- 105 (343)
Q Consensus 39 ~~~~~l~y~~~g~--~~~~~~vv~ihG~~~~~~~~--------~~~~~~~~~~~~--l~~~~g~~vi~~D~~G~G~S~~- 105 (343)
....++.|+.+|. ....++||++|++++++... ..-.|..++ .. ..+...|.||++|..|-|.|..
T Consensus 38 l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~i-G~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 38 IPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLI-GPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred cCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhcc-CCCCCcCCCceEEEEecccCCCcCCCC
Confidence 4567899999997 23458999999999865320 001143333 21 1222259999999999875321
Q ss_pred ---------------------CCCccHHHHHHHHHHHHHHhCCCCeEE-EEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 106 ---------------------DPKRTRKSLALDIEELADQLGLGSKFY-VVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 106 ---------------------~~~~~~~~~~~di~~~l~~l~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
.+.++++++++++.++++++++ +++. ++||||||++++.+|.++|++|+++|++++.
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi-~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~ 195 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGI-ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGN 195 (389)
T ss_pred CCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCC-CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecC
Confidence 1225899999999999999999 6886 9999999999999999999999999999886
Q ss_pred ccccCCCCCcc--chHHHHhhccccc-hH-----------HHHHhhhchHHHhh-----hhccCCCCcchhcccCccccc
Q 019314 164 INYWWPGFPAN--LTKEAYYLQLPQD-QW-----------ALRVAHYAPWLAYW-----WNTQKLFPPSAVVARRPEIFS 224 (343)
Q Consensus 164 ~~~~~~~~~~~--~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 224 (343)
.... +.. ............+ .| ...+.........+ ++..++...... ...+ ...
T Consensus 196 ~~~~----~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~-~~~~-~~~ 269 (389)
T PRK06765 196 PQND----AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASI-EVDP-YEK 269 (389)
T ss_pred CCCC----hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccc-cccc-ccc
Confidence 4311 110 0111111111000 00 00000000000000 001111000000 0000 000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCC--CCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHh
Q 019314 225 AQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWE--FDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYIS 302 (343)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~ 302 (343)
.........+...... ..........+.... .....+. ....++...+.+|++|+|+|+|++|.++|++..+.+.
T Consensus 270 ~~~~~~~e~yl~~~~~--~~~~~~Dan~~l~l~-~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la 346 (389)
T PRK06765 270 VSTLTSFEKEINKATY--RRAELVDANHWLYLA-KAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMV 346 (389)
T ss_pred ccchhhHHHHHHHHHH--HhhhccChhhHHHHH-HHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHH
Confidence 0000000011100000 000000000000000 0000010 0011334457789999999999999999999999999
Q ss_pred hcCC----CceEEEcCC-CCCccccC-cchHHHHHHHHHcc
Q 019314 303 KKLP----WIRYHEIPG-SGHLIADA-DGMTEAIIKALLLG 337 (343)
Q Consensus 303 ~~~~----~~~~~~~~~-~gH~~~~e-p~~~~~~i~~fl~~ 337 (343)
+.++ +++++++++ +||+++.| |+.+++.|.+||++
T Consensus 347 ~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 347 DILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9886 689999985 99999997 99999999999976
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.94 E-value=4.4e-26 Score=191.71 Aligned_cols=267 Identities=13% Similarity=0.159 Sum_probs=155.9
Q ss_pred eeecCccEEEEEeccCCCCCCeEEEecCCCCCccc-c--------------------hhhhhhhhhhHHHHhHcCcEEEE
Q 019314 36 LQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGS-L--------------------NFTVLACLSFQEVVDELGIYIVS 94 (343)
Q Consensus 36 ~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~-~--------------------~~~~~~~~~~~~l~~~~g~~vi~ 94 (343)
+.+.+|.++++..+.+...+.+|+++||++.+... + ++.+...++ +.|.++ ||+|++
T Consensus 2 ~~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~-~~l~~~-G~~V~~ 79 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWI-ENFNKN-GYSVYG 79 (332)
T ss_pred ccCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHH-HHHHHC-CCcEEE
Confidence 34578999999888664457799999999988752 0 000002344 667665 999999
Q ss_pred ecCCCcccCCCC---CC--ccHHHHHHHHHHHHHHhCC-----------------------CCeEEEEEecccHHHHHHH
Q 019314 95 FDRPGYGESDPD---PK--RTRKSLALDIEELADQLGL-----------------------GSKFYVVGFSMGGQVVWSC 146 (343)
Q Consensus 95 ~D~~G~G~S~~~---~~--~~~~~~~~di~~~l~~l~~-----------------------~~~~~lvG~S~Gg~~a~~~ 146 (343)
+|+||||+|+.. .. .+++++++|+.++++.+.. +.|++|+||||||.+++.+
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~ 159 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRL 159 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHH
Confidence 999999999853 22 3789999999999986421 2589999999999999999
Q ss_pred HHHhhc--------ccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcchhccc
Q 019314 147 LKYISH--------RLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVAR 218 (343)
Q Consensus 147 a~~~p~--------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (343)
+.++++ .++++|+++|.........+........... ....+....+.+. ...
T Consensus 160 ~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~-----l~~~~~~~~p~~~--------~~~------ 220 (332)
T TIGR01607 160 LELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLP-----VMNFMSRVFPTFR--------ISK------ 220 (332)
T ss_pred HHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHH-----HHHHHHHHCCccc--------ccC------
Confidence 987653 5899999998753211000000000000000 0000000111000 000
Q ss_pred CccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCC--CCcEEEEecCCCCCCChh
Q 019314 219 RPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNS--EGSVHLWQGDEDRLVPVI 296 (343)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~Pvl~i~G~~D~~~~~~ 296 (343)
...++. +.........++.... ......+...+..... .+...++++ ++|+|+++|++|.+++++
T Consensus 221 -~~~~~~-~~~~~~~~~~Dp~~~~----~~~s~~~~~~l~~~~~-------~~~~~~~~i~~~~P~Lii~G~~D~vv~~~ 287 (332)
T TIGR01607 221 -KIRYEK-SPYVNDIIKFDKFRYD----GGITFNLASELIKATD-------TLDCDIDYIPKDIPILFIHSKGDCVCSYE 287 (332)
T ss_pred -cccccc-ChhhhhHHhcCccccC----CcccHHHHHHHHHHHH-------HHHhhHhhCCCCCCEEEEEeCCCCccCHH
Confidence 000000 0000111111111000 0000000000100000 000113334 678999999999999999
Q ss_pred HHHHHhhcC--CCceEEEcCCCCCccccC--cchHHHHHHHHHc
Q 019314 297 LQRYISKKL--PWIRYHEIPGSGHLIADA--DGMTEAIIKALLL 336 (343)
Q Consensus 297 ~~~~~~~~~--~~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~ 336 (343)
.++.+.+.. ++++++++++++|.++.| ++++.+.|.+||+
T Consensus 288 ~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 288 GTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 998887765 568999999999999997 5789999999985
No 47
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.94 E-value=7.9e-26 Score=167.89 Aligned_cols=221 Identities=19% Similarity=0.224 Sum_probs=148.7
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCC-CCccHHHHHHHHHHHHHHh---CCCCe
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPD-PKRTRKSLALDIEELADQL---GLGSK 130 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~di~~~l~~l---~~~~~ 130 (343)
+.+||||||+.++... .+.+. +.|.++ ||.|.+|.+||||..... -..+.++|.+++.+..+.| +. +.
T Consensus 15 ~~AVLllHGFTGt~~D-----vr~Lg-r~L~e~-GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy-~e 86 (243)
T COG1647 15 NRAVLLLHGFTGTPRD-----VRMLG-RYLNEN-GYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGY-DE 86 (243)
T ss_pred CEEEEEEeccCCCcHH-----HHHHH-HHHHHC-CceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCC-Ce
Confidence 4789999999999999 98887 777666 999999999999977522 2358888888887776665 56 69
Q ss_pred EEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccCCC
Q 019314 131 FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLF 210 (343)
Q Consensus 131 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (343)
+.++|.||||.+++.+|.++| ++++|.+++..... ........+.....
T Consensus 87 I~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k----~~~~iie~~l~y~~------------------------- 135 (243)
T COG1647 87 IAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVK----SWRIIIEGLLEYFR------------------------- 135 (243)
T ss_pred EEEEeecchhHHHHHHHhhCC--ccceeeecCCcccc----cchhhhHHHHHHHH-------------------------
Confidence 999999999999999999999 89999999875421 00000000000000
Q ss_pred CcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCC
Q 019314 211 PPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDED 290 (343)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D 290 (343)
+...+...+.+.+.+....-..........+.. +.. ++...+..|..|++++.|++|
T Consensus 136 --------~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~-~i~--------------~~~~~~~~I~~pt~vvq~~~D 192 (243)
T COG1647 136 --------NAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKK-LIK--------------DARRSLDKIYSPTLVVQGRQD 192 (243)
T ss_pred --------HhhhccCCCHHHHHHHHHHhhcchHHHHHHHHH-HHH--------------HHHhhhhhcccchhheecccC
Confidence 000000111111111110000000000000001 111 222337788899999999999
Q ss_pred CCCChhHHHHHhhcCC--CceEEEcCCCCCccccC--cchHHHHHHHHHcc
Q 019314 291 RLVPVILQRYISKKLP--WIRYHEIPGSGHLIADA--DGMTEAIIKALLLG 337 (343)
Q Consensus 291 ~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~~ 337 (343)
+++|.+.+..+.+... ..++..++++||.+..+ .+.+.+.+..||++
T Consensus 193 ~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 193 EMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 9999999999888774 46899999999999984 88999999999863
No 48
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.94 E-value=2.7e-25 Score=176.67 Aligned_cols=254 Identities=16% Similarity=0.102 Sum_probs=163.8
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhC----CC
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLG----LG 128 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~----~~ 128 (343)
...|+++++||+.++... |+.+. ..|.+..+-.|+++|.|.||.|......+..++++|+..+|+..+ .
T Consensus 50 ~~~Pp~i~lHGl~GS~~N-----w~sv~-k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~- 122 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKEN-----WRSVA-KNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRL- 122 (315)
T ss_pred CCCCceEEecccccCCCC-----HHHHH-HHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHccccccc-
Confidence 458999999999999999 99998 999998889999999999999998888899999999999999984 5
Q ss_pred CeEEEEEecccH-HHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHH---HHHhhhchHHHhhh
Q 019314 129 SKFYVVGFSMGG-QVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWA---LRVAHYAPWLAYWW 204 (343)
Q Consensus 129 ~~~~lvG~S~Gg-~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 204 (343)
.+++++|||||| .+++..+..+|+.+..+|+++-.+. .-+.........+......+... .......+.+...
T Consensus 123 ~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~--~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~- 199 (315)
T KOG2382|consen 123 DPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPG--GVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEV- 199 (315)
T ss_pred CCceecccCcchHHHHHHHHHhcCcccceeEEEecCCc--cCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHH-
Confidence 599999999999 8888888899999999999986532 01111122222222222111110 0000000000000
Q ss_pred hccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhc-cCCCCCCCCCCCCCCCCCCCcEE
Q 019314 205 NTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIG-FGTWEFDPMDLENPFPNSEGSVH 283 (343)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~Pvl 283 (343)
.+ +....+++..............-......+....... ...+.. ++. . +....||+
T Consensus 200 ----~~-------------d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~---~l~-~-~~~~~pvl 257 (315)
T KOG2382|consen 200 ----GF-------------DNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWA---DLE-D-GPYTGPVL 257 (315)
T ss_pred ----hc-------------chHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccc---ccc-c-ccccccee
Confidence 00 0000000000000000000000000000000000000 000100 111 1 45567899
Q ss_pred EEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHccc
Q 019314 284 LWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGE 338 (343)
Q Consensus 284 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~ 338 (343)
++.|.++..++.+....+.+.+|+++++.++++||+++.| |+.+.+.|.+|+...
T Consensus 258 fi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 258 FIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred EEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999998 999999999999765
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.92 E-value=9.2e-24 Score=177.74 Aligned_cols=269 Identities=12% Similarity=0.051 Sum_probs=147.1
Q ss_pred eeeeecCccEEEEEec--cC-CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCC-CC-
Q 019314 34 LLLQQTSHQYLKFLNS--IE-YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPD-PK- 108 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~--g~-~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~- 108 (343)
..+...||..+.+... +. ...+|+||++||++++... .++..++ ..|.++ ||+|+++|+||||.+... ..
T Consensus 34 ~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~---~~~~~~~-~~l~~~-G~~v~~~d~rG~g~~~~~~~~~ 108 (324)
T PRK10985 34 QRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNS---PYAHGLL-EAAQKR-GWLGVVMHFRGCSGEPNRLHRI 108 (324)
T ss_pred eEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcC---HHHHHHH-HHHHHC-CCEEEEEeCCCCCCCccCCcce
Confidence 3567778877655322 21 2346899999999887544 1144565 667665 999999999999987532 11
Q ss_pred c---cHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcc--cceeEEEcccccccCCCCCccchHHHHhhc
Q 019314 109 R---TRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHR--LTGAALIAPVINYWWPGFPANLTKEAYYLQ 183 (343)
Q Consensus 109 ~---~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
+ ..+|....+..+.+.++. .+++++||||||.++..++.++++. +.++|++++..... .........
T Consensus 109 ~~~~~~~D~~~~i~~l~~~~~~-~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~-------~~~~~~~~~ 180 (324)
T PRK10985 109 YHSGETEDARFFLRWLQREFGH-VPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLE-------ACSYRMEQG 180 (324)
T ss_pred ECCCchHHHHHHHHHHHHhCCC-CCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHH-------HHHHHHhhh
Confidence 2 233333333334444565 6899999999999988888887654 89999998853210 000001000
Q ss_pred cccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhh--hchhhhHHHHHhcc
Q 019314 184 LPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQ--GVHESLFRDMMIGF 261 (343)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 261 (343)
.. ......+.......... ....+... .....+.......... +....... .+. .......
T Consensus 181 ~~-~~~~~~l~~~l~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~---fd~~~~~~~~g~~-~~~~~y~--- 243 (324)
T PRK10985 181 FS-RVYQRYLLNLLKANAAR-KLAAYPGT--------LPINLAQLKSVRRLRE---FDDLITARIHGFA-DAIDYYR--- 243 (324)
T ss_pred HH-HHHHHHHHHHHHHHHHH-HHHhcccc--------ccCCHHHHhcCCcHHH---HhhhheeccCCCC-CHHHHHH---
Confidence 00 00000000000000000 00000000 0000000000000000 00000000 000 0000000
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-c-----chHHHHHHHHH
Q 019314 262 GTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-D-----GMTEAIIKALL 335 (343)
Q Consensus 262 ~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p-----~~~~~~i~~fl 335 (343)
..+....+++|++|+++|+|++|++++++....+.+..+++++++++++||+.+.| . ....+.+.+|+
T Consensus 244 ------~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~ 317 (324)
T PRK10985 244 ------QCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWL 317 (324)
T ss_pred ------HCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHH
Confidence 00122337889999999999999999988888787788899999999999999986 3 35677788888
Q ss_pred ccc
Q 019314 336 LGE 338 (343)
Q Consensus 336 ~~~ 338 (343)
+..
T Consensus 318 ~~~ 320 (324)
T PRK10985 318 TTY 320 (324)
T ss_pred HHh
Confidence 543
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.92 E-value=2.5e-23 Score=179.13 Aligned_cols=230 Identities=13% Similarity=0.032 Sum_probs=140.7
Q ss_pred ecCccEEEEEeccC--CCCCCeEEEecCCCCCc-ccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-CccHHH
Q 019314 38 QTSHQYLKFLNSIE--YPTSLLHLNFHLFNGCV-GSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-KRTRKS 113 (343)
Q Consensus 38 ~~~~~~l~y~~~g~--~~~~~~vv~ihG~~~~~-~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~ 113 (343)
..+|.++......+ ++..|+||++||+.+.. .. |..++ ..|.++ ||.|+++|+||+|.|.... ..+...
T Consensus 175 ~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~-----~~~~~-~~La~~-Gy~vl~~D~pG~G~s~~~~~~~d~~~ 247 (414)
T PRK05077 175 IPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDY-----YRLFR-DYLAPR-GIAMLTIDMPSVGFSSKWKLTQDSSL 247 (414)
T ss_pred cCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhh-----HHHHH-HHHHhC-CCEEEEECCCCCCCCCCCCccccHHH
Confidence 34554666544322 23356666666666543 45 76665 677765 9999999999999997532 233444
Q ss_pred HHHHHHHHHHHh---CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHH
Q 019314 114 LALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWA 190 (343)
Q Consensus 114 ~~~di~~~l~~l---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (343)
..+.+.+.+... +. +++.++|||+||.+++.+|..+|++|+++|++++...... . ......
T Consensus 248 ~~~avld~l~~~~~vd~-~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~---~---~~~~~~--------- 311 (414)
T PRK05077 248 LHQAVLNALPNVPWVDH-TRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLL---T---DPKRQQ--------- 311 (414)
T ss_pred HHHHHHHHHHhCcccCc-ccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhh---c---chhhhh---------
Confidence 444555555544 45 6899999999999999999999999999999998642100 0 000000
Q ss_pred HHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCC
Q 019314 191 LRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMD 270 (343)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
..+..........+- ......+.+.. ....|......
T Consensus 312 -----~~p~~~~~~la~~lg------------~~~~~~~~l~~--------------------------~l~~~sl~~~~ 348 (414)
T PRK05077 312 -----QVPEMYLDVLASRLG------------MHDASDEALRV--------------------------ELNRYSLKVQG 348 (414)
T ss_pred -----hchHHHHHHHHHHhC------------CCCCChHHHHH--------------------------Hhhhccchhhh
Confidence 000000000000000 00000000000 00001111111
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHccc
Q 019314 271 LENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGE 338 (343)
Q Consensus 271 ~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~ 338 (343)
.. .+++++|+|+|+|++|.++|++.++.+.+..++++++++|++ ++.+ ++++.+.+.+||++.
T Consensus 349 ~l--~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 349 LL--GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred hh--ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 10 257889999999999999999999999999999999999986 3445 999999999999753
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.92 E-value=3.1e-23 Score=170.23 Aligned_cols=234 Identities=16% Similarity=0.154 Sum_probs=135.0
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHh-----CCC
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL-----GLG 128 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l-----~~~ 128 (343)
.+++||++||++....... ..|..++ +.|.++ ||.|+++|+||||.|+... .+++++.+|+.++++.+ +.
T Consensus 25 ~~~~vv~i~gg~~~~~g~~-~~~~~la-~~l~~~-G~~v~~~Dl~G~G~S~~~~-~~~~~~~~d~~~~~~~l~~~~~g~- 99 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSH-RQFVLLA-RRLAEA-GFPVLRFDYRGMGDSEGEN-LGFEGIDADIAAAIDAFREAAPHL- 99 (274)
T ss_pred CCCeEEEEeCCccccCCch-hHHHHHH-HHHHHC-CCEEEEeCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHhhCCCC-
Confidence 4568888888764332100 1155665 677665 9999999999999987542 47778888888888877 45
Q ss_pred CeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccC
Q 019314 129 SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQK 208 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (343)
++++++|||+||.+++.+|.. +++|+++|+++|..... . .......... ....... +. .| ..
T Consensus 100 ~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~----~-~~~~~~~~~~-----~~~~~~~--~~---~~--~~ 161 (274)
T TIGR03100 100 RRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTE----A-AQAASRIRHY-----YLGQLLS--AD---FW--RK 161 (274)
T ss_pred CcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCc----c-cchHHHHHHH-----HHHHHhC--hH---HH--HH
Confidence 579999999999999999875 56899999999863211 0 0000000000 0000000 00 00 00
Q ss_pred CCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecC
Q 019314 209 LFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGD 288 (343)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~ 288 (343)
.. ....+- ....+.+..................... ++...++++++|+++++|+
T Consensus 162 ~~---------~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~~~P~ll~~g~ 216 (274)
T TIGR03100 162 LL---------SGEVNL--GSSLRGLGDALLKARQKGDEVAHGGLAE--------------RMKAGLERFQGPVLFILSG 216 (274)
T ss_pred hc---------CCCccH--HHHHHHHHHHHHhhhhcCCCcccchHHH--------------HHHHHHHhcCCcEEEEEcC
Confidence 00 000000 0000010000000000000000000111 1112266778999999999
Q ss_pred CCCCCChhHH------HHHhhcC--CCceEEEcCCCCCccccC--cchHHHHHHHHHc
Q 019314 289 EDRLVPVILQ------RYISKKL--PWIRYHEIPGSGHLIADA--DGMTEAIIKALLL 336 (343)
Q Consensus 289 ~D~~~~~~~~------~~~~~~~--~~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~ 336 (343)
.|...+ +.. ..+.+.+ ++++++.+++++|++..+ ++++.+.|.+||+
T Consensus 217 ~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 217 NDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred cchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 999864 222 4445544 789999999999998664 7999999999995
No 52
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.91 E-value=2.3e-24 Score=173.61 Aligned_cols=218 Identities=25% Similarity=0.280 Sum_probs=127.9
Q ss_pred cEEEEecCCCcccCCC-----CCCccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 90 IYIVSFDRPGYGESDP-----DPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 90 ~~vi~~D~~G~G~S~~-----~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
|+|+++|+||+|.|++ ...++.+++++++..+++.++. ++++++||||||.+++.+|+++|++|+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGI-KKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT-SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC-CCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 6899999999999995 2346999999999999999999 689999999999999999999999999999999851
Q ss_pred --cccCCCCCccchHH-HHhhccccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHH
Q 019314 165 --NYWWPGFPANLTKE-AYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINR 241 (343)
Q Consensus 165 --~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
... ........ ....... ..................... .. .. ......................
T Consensus 80 ~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~---~~---~~~~~~~~~~~~~~~~~~~~~~- 147 (230)
T PF00561_consen 80 DLPDG---LWNRIWPRGNLQGQLL-DNFFNFLSDPIKPLLGRWPKQ-FF---AY---DREFVEDFLKQFQSQQYARFAE- 147 (230)
T ss_dssp HHHHH---HHHHCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HH---HH---HHHHHHTHHHHHHHHHHHHTCH-
T ss_pred cchhh---hhHHHHhhhhhhhhHH-Hhhhccccccchhhhhhhhhh-ee---ec---cCccccchhhccchhhhhHHHH-
Confidence 000 00000000 0000000 000000000000000000000 00 00 0000000000000000000000
Q ss_pred HHhhhhhch--hhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCc
Q 019314 242 AQVIQQGVH--ESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHL 319 (343)
Q Consensus 242 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 319 (343)
......... ....... +....+.++++|+++++|++|.++|++....+.+.+|+.++++++++||.
T Consensus 148 ~~~~~~~~~~~~~~~~~~------------~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~ 215 (230)
T PF00561_consen 148 TDAFDNMFWNALGYFSVW------------DPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHF 215 (230)
T ss_dssp HHHHHHHHHHHHHHHHHH------------HHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCST
T ss_pred HHHHhhhccccccccccc------------cccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChH
Confidence 000000000 0000000 11112667999999999999999999999999999999999999999999
Q ss_pred cccC-cchHHHHHH
Q 019314 320 IADA-DGMTEAIIK 332 (343)
Q Consensus 320 ~~~e-p~~~~~~i~ 332 (343)
.+.+ ++++++.|.
T Consensus 216 ~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 216 AFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHSHHHHHHHHH
T ss_pred HHhcCHHhhhhhhc
Confidence 9996 999998875
No 53
>PRK13604 luxD acyl transferase; Provisional
Probab=99.91 E-value=6.9e-23 Score=165.04 Aligned_cols=224 Identities=14% Similarity=0.146 Sum_probs=138.7
Q ss_pred eeeecCccEEEEEeccCC----CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc-ccCCCCCC-
Q 019314 35 LLQQTSHQYLKFLNSIEY----PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY-GESDPDPK- 108 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~----~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S~~~~~- 108 (343)
.+...+|.+|+-...-+. ...++||++||+++.... +..++ ..|.++ ||.|+.+|.||+ |+|++.-.
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~-----~~~~A-~~La~~-G~~vLrfD~rg~~GeS~G~~~~ 85 (307)
T PRK13604 13 VICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDH-----FAGLA-EYLSSN-GFHVIRYDSLHHVGLSSGTIDE 85 (307)
T ss_pred eEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHH-----HHHHH-HHHHHC-CCEEEEecCCCCCCCCCCcccc
Confidence 455678888886655442 235789999999998766 77877 777765 999999999987 99976432
Q ss_pred ccHHHHHHHHHHHHHHh---CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccc
Q 019314 109 RTRKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLP 185 (343)
Q Consensus 109 ~~~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
.+.....+|+..+++.+ +. +++.|+||||||.+|+..|... .++++|+.+|..+. + ..+.....
T Consensus 86 ~t~s~g~~Dl~aaid~lk~~~~-~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l-----~-----d~l~~~~~ 152 (307)
T PRK13604 86 FTMSIGKNSLLTVVDWLNTRGI-NNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNL-----R-----DTLERALG 152 (307)
T ss_pred CcccccHHHHHHHHHHHHhcCC-CceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccH-----H-----HHHHHhhh
Confidence 24444567777666665 44 6899999999999997777643 49999999997431 1 00000000
Q ss_pred cchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhh-hHHHHHHHHHHHhhhhhchhhhHHHHHhccCCC
Q 019314 186 QDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLM-PKLAVRQINRAQVIQQGVHESLFRDMMIGFGTW 264 (343)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (343)
.. + ..++... .+....-...... ..+. .+... ..|
T Consensus 153 ~~-----------------~--~~~p~~~----lp~~~d~~g~~l~~~~f~-------------------~~~~~--~~~ 188 (307)
T PRK13604 153 YD-----------------Y--LSLPIDE----LPEDLDFEGHNLGSEVFV-------------------TDCFK--HGW 188 (307)
T ss_pred cc-----------------c--ccCcccc----cccccccccccccHHHHH-------------------HHHHh--cCc
Confidence 00 0 0000000 0000000000000 0000 00000 000
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCC--CceEEEcCCCCCccccC
Q 019314 265 EFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP--WIRYHEIPGSGHLIADA 323 (343)
Q Consensus 265 ~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e 323 (343)
. ........++++++|+|+|||++|.++|.+.++.+.+.++ +++++++||++|.+...
T Consensus 189 ~-~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~ 248 (307)
T PRK13604 189 D-TLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGEN 248 (307)
T ss_pred c-ccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCcc
Confidence 0 0001112255678899999999999999999999999875 68999999999998764
No 54
>PLN02872 triacylglycerol lipase
Probab=99.90 E-value=2.3e-22 Score=170.95 Aligned_cols=123 Identities=20% Similarity=0.161 Sum_probs=93.4
Q ss_pred eeeeecCccEEEEEeccC------CCCCCeEEEecCCCCCcccchhhhhh------hhhhHHHHhHcCcEEEEecCCCcc
Q 019314 34 LLLQQTSHQYLKFLNSIE------YPTSLLHLNFHLFNGCVGSLNFTVLA------CLSFQEVVDELGIYIVSFDRPGYG 101 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g~------~~~~~~vv~ihG~~~~~~~~~~~~~~------~~~~~~l~~~~g~~vi~~D~~G~G 101 (343)
..+++.||..|....... ...+|+||++||+..++.. |. .++ ..|+++ ||+|+++|+||++
T Consensus 47 h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~-----w~~~~~~~sla-~~La~~-GydV~l~n~RG~~ 119 (395)
T PLN02872 47 HTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDA-----WFLNSPEQSLG-FILADH-GFDVWVGNVRGTR 119 (395)
T ss_pred EEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccc-----eeecCcccchH-HHHHhC-CCCcccccccccc
Confidence 457788998888776432 1236899999999999988 53 232 345544 9999999999988
Q ss_pred cCCC-------CC---CccHHHHH-HHHHHHHHHh---CCCCeEEEEEecccHHHHHHHHHHhhc---ccceeEEEcccc
Q 019314 102 ESDP-------DP---KRTRKSLA-LDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISH---RLTGAALIAPVI 164 (343)
Q Consensus 102 ~S~~-------~~---~~~~~~~~-~di~~~l~~l---~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~ 164 (343)
.|.+ +. ++++++++ .|+.++++++ .. ++++++|||+||.+++.++ .+|+ +|+++++++|..
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~ 197 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPIS 197 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchh
Confidence 6532 11 24788888 7999999986 33 6999999999999998555 5676 689999999875
Q ss_pred c
Q 019314 165 N 165 (343)
Q Consensus 165 ~ 165 (343)
.
T Consensus 198 ~ 198 (395)
T PLN02872 198 Y 198 (395)
T ss_pred h
Confidence 4
No 55
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.90 E-value=6.8e-23 Score=178.76 Aligned_cols=262 Identities=13% Similarity=0.079 Sum_probs=142.6
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC---CccHHHHHHHHHHHHHHhCCCCe
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP---KRTRKSLALDIEELADQLGLGSK 130 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~di~~~l~~l~~~~~ 130 (343)
.+++||++||+......++...-+.++ ..|.++ ||+|+++|++|+|.+.... ++..+.+.+.+..+++.++. ++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv-~~L~~q-Gf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~-~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLV-RWLVEQ-GHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGE-KQ 263 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHH-HHHHHC-CcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCC-CC
Confidence 578999999999888884322223676 778776 9999999999999886432 23445566667777777888 79
Q ss_pred EEEEEecccHHHHH----HHHHHh-hcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhh
Q 019314 131 FYVVGFSMGGQVVW----SCLKYI-SHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWN 205 (343)
Q Consensus 131 ~~lvG~S~Gg~~a~----~~a~~~-p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (343)
++++|||+||.++. .+++.+ |++|++++++++.+++..++.-............ ..........+.......
T Consensus 264 v~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~---e~~~~~~G~lpg~~m~~~ 340 (532)
T TIGR01838 264 VNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGI---ERQNGGGGYLDGRQMAVT 340 (532)
T ss_pred eEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHH---HHHHHhcCCCCHHHHHHH
Confidence 99999999999852 345555 7899999999998775432111110000000000 000000001110000000
Q ss_pred ccCCCCcchh-cccCccccchhh-hh-hhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcE
Q 019314 206 TQKLFPPSAV-VARRPEIFSAQD-VQ-LMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSV 282 (343)
Q Consensus 206 ~~~~~~~~~~-~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 282 (343)
...+.+.... .......+..+. .. .+..+..+...........+...+..+...... .+...+....+.+|++|+
T Consensus 341 F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G--~~~v~g~~~dL~~I~vPv 418 (532)
T TIGR01838 341 FSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTG--GLEVCGVRLDLSKVKVPV 418 (532)
T ss_pred HHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCC--eeEECCEecchhhCCCCE
Confidence 0000000000 000000000000 00 000000000000000001111111111111111 122223344688999999
Q ss_pred EEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC
Q 019314 283 HLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA 323 (343)
Q Consensus 283 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 323 (343)
++|.|++|.++|.+.+..+.+.+++.+..+++++||.++.+
T Consensus 419 LvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 419 YIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVV 459 (532)
T ss_pred EEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhh
Confidence 99999999999999999999999999999999999999985
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.90 E-value=2.9e-22 Score=154.48 Aligned_cols=186 Identities=18% Similarity=0.136 Sum_probs=123.5
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhH--cCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEE
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDE--LGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYV 133 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~l 133 (343)
|+||++||++++... |+...+..+..+ .+|+|+++|+||+| ++.++++.++++.++. +++++
T Consensus 2 p~illlHGf~ss~~~-----~~~~~~~~~l~~~~~~~~v~~~dl~g~~----------~~~~~~l~~l~~~~~~-~~~~l 65 (190)
T PRK11071 2 STLLYLHGFNSSPRS-----AKATLLKNWLAQHHPDIEMIVPQLPPYP----------ADAAELLESLVLEHGG-DPLGL 65 (190)
T ss_pred CeEEEECCCCCCcch-----HHHHHHHHHHHHhCCCCeEEeCCCCCCH----------HHHHHHHHHHHHHcCC-CCeEE
Confidence 579999999999999 764211344332 26999999999985 4688999999999998 69999
Q ss_pred EEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcc
Q 019314 134 VGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPS 213 (343)
Q Consensus 134 vG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (343)
+||||||.+++.+|.++|. ++|+++|... +. ........ ...
T Consensus 66 vG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~------~~----~~~~~~~~----------------------~~~--- 107 (190)
T PRK11071 66 VGSSLGGYYATWLSQCFML---PAVVVNPAVR------PF----ELLTDYLG----------------------ENE--- 107 (190)
T ss_pred EEECHHHHHHHHHHHHcCC---CEEEECCCCC------HH----HHHHHhcC----------------------Ccc---
Confidence 9999999999999999983 4688888532 10 00000000 000
Q ss_pred hhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCC
Q 019314 214 AVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLV 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~ 293 (343)
.....+....-..+. .+... + ++.. +. ..+|+++++|++|.++
T Consensus 108 -------~~~~~~~~~~~~~~~-------------------~d~~~------~---~~~~-i~-~~~~v~iihg~~De~V 150 (190)
T PRK11071 108 -------NPYTGQQYVLESRHI-------------------YDLKV------M---QIDP-LE-SPDLIWLLQQTGDEVL 150 (190)
T ss_pred -------cccCCCcEEEcHHHH-------------------HHHHh------c---CCcc-CC-ChhhEEEEEeCCCCcC
Confidence 000000000000000 00000 0 1111 22 5567999999999999
Q ss_pred ChhHHHHHhhcCCCceEEEcCCCCCccccCcchHHHHHHHHHc
Q 019314 294 PVILQRYISKKLPWIRYHEIPGSGHLIADADGMTEAIIKALLL 336 (343)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ep~~~~~~i~~fl~ 336 (343)
|.+.+..+.+. ++.++++|++|.+.. .+...+.+.+|++
T Consensus 151 ~~~~a~~~~~~---~~~~~~~ggdH~f~~-~~~~~~~i~~fl~ 189 (190)
T PRK11071 151 DYRQAVAYYAA---CRQTVEEGGNHAFVG-FERYFNQIVDFLG 189 (190)
T ss_pred CHHHHHHHHHh---cceEEECCCCcchhh-HHHhHHHHHHHhc
Confidence 99999999884 577788999998733 4778888888875
No 57
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.89 E-value=3.4e-22 Score=170.24 Aligned_cols=108 Identities=11% Similarity=0.110 Sum_probs=83.3
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHH-HH----HHHHHhCCC
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALD-IE----ELADQLGLG 128 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~d-i~----~~l~~l~~~ 128 (343)
.+++||++||...+...++...++.++ ..|.++ ||+|+++|++|+|.|+. ..++++++.+ +. .+.+..+.
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~-~~L~~~-G~~V~~~D~~g~g~s~~--~~~~~d~~~~~~~~~v~~l~~~~~~- 135 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLV-RGLLER-GQDVYLIDWGYPDRADR--YLTLDDYINGYIDKCVDYICRTSKL- 135 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHH-HHHHHC-CCeEEEEeCCCCCHHHh--cCCHHHHHHHHHHHHHHHHHHHhCC-
Confidence 356899999987666553333356777 777765 99999999999998763 2356666533 44 44445566
Q ss_pred CeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccc
Q 019314 129 SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY 166 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 166 (343)
++++++||||||.+++.+++.+|++|+++|++++...+
T Consensus 136 ~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred CcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 69999999999999999999999999999999987654
No 58
>PRK10566 esterase; Provisional
Probab=99.88 E-value=2.4e-21 Score=157.76 Aligned_cols=211 Identities=18% Similarity=0.203 Sum_probs=125.9
Q ss_pred EEEEeccC-CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCC-CCccH-------HHH
Q 019314 44 LKFLNSIE-YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPD-PKRTR-------KSL 114 (343)
Q Consensus 44 l~y~~~g~-~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~~~-------~~~ 114 (343)
++|...+. ++..|+||++||++++... |..++ ..|.++ ||+|+++|+||+|.+... ..... .+.
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~-----~~~~~-~~l~~~-G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~ 87 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLV-----YSYFA-VALAQA-GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQN 87 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccch-----HHHHH-HHHHhC-CCEEEEecCCcccccCCCccccchhhHHHHHHHH
Confidence 44555443 2346899999999999888 77776 777765 999999999999976421 11111 122
Q ss_pred HHHHHHHHHHh------CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccch
Q 019314 115 ALDIEELADQL------GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQ 188 (343)
Q Consensus 115 ~~di~~~l~~l------~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (343)
.+|+.++++.+ +. ++++++|||+||.+++.++.++|+....++++++... . ....
T Consensus 88 ~~~~~~~~~~l~~~~~~~~-~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~------ 148 (249)
T PRK10566 88 MQEFPTLRAAIREEGWLLD-DRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-------T-----SLAR------ 148 (249)
T ss_pred HHHHHHHHHHHHhcCCcCc-cceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-------H-----HHHH------
Confidence 34444444443 33 6899999999999999999998864334444433200 0 0000
Q ss_pred HHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCC
Q 019314 189 WALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDP 268 (343)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
..++... .. ............. .. . .+
T Consensus 149 -------------------~~~~~~~-----~~--~~~~~~~~~~~~~---------------~~--------~--~~-- 175 (249)
T PRK10566 149 -------------------TLFPPLI-----PE--TAAQQAEFNNIVA---------------PL--------A--EW-- 175 (249)
T ss_pred -------------------Hhccccc-----cc--ccccHHHHHHHHH---------------HH--------h--hc--
Confidence 0000000 00 0000000000000 00 0 00
Q ss_pred CCCCCCCCCC-CCcEEEEecCCCCCCChhHHHHHhhcCCC------ceEEEcCCCCCccccCcchHHHHHHHHHcc
Q 019314 269 MDLENPFPNS-EGSVHLWQGDEDRLVPVILQRYISKKLPW------IRYHEIPGSGHLIADADGMTEAIIKALLLG 337 (343)
Q Consensus 269 ~~~~~~~~~i-~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~------~~~~~~~~~gH~~~~ep~~~~~~i~~fl~~ 337 (343)
+....++++ ++|+|+++|++|.++|++.++.+.+.++. +++..++|+||... + ...+.+.+||++
T Consensus 176 -~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~--~-~~~~~~~~fl~~ 247 (249)
T PRK10566 176 -EVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT--P-EALDAGVAFFRQ 247 (249)
T ss_pred -ChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC--H-HHHHHHHHHHHh
Confidence 111125555 68899999999999999999888886642 57778999999853 3 356677777764
No 59
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.87 E-value=3.7e-22 Score=153.33 Aligned_cols=119 Identities=18% Similarity=0.264 Sum_probs=95.1
Q ss_pred ecCccE--EEEEeccC-CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC--CccHH
Q 019314 38 QTSHQY--LKFLNSIE-YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP--KRTRK 112 (343)
Q Consensus 38 ~~~~~~--l~y~~~g~-~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~ 112 (343)
..++.. +..+..++ .+.+|.++++||++.+.-. |..++ ..+......+|+++|+||||++.-.+ +.+.+
T Consensus 54 ~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LS-----fA~~a-~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~e 127 (343)
T KOG2564|consen 54 SIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALS-----FAIFA-SELKSKIRCRCLALDLRGHGETKVENEDDLSLE 127 (343)
T ss_pred ccCCCcceEEEEEecCCCCCccEEEEeecCcccchh-----HHHHH-HHHHhhcceeEEEeeccccCccccCChhhcCHH
Confidence 344444 43333333 4578999999999999999 99998 99988777899999999999997433 46999
Q ss_pred HHHHHHHHHHHHh--CCCCeEEEEEecccHHHHHHHHHH--hhcccceeEEEccc
Q 019314 113 SLALDIEELADQL--GLGSKFYVVGFSMGGQVVWSCLKY--ISHRLTGAALIAPV 163 (343)
Q Consensus 113 ~~~~di~~~l~~l--~~~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lil~~~~ 163 (343)
.+++|+.++++.+ ....+++||||||||.||.+.|.. -|. +.+++.++-.
T Consensus 128 T~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 128 TMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 9999999999987 223689999999999999888764 454 8899988853
No 60
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=1.1e-20 Score=145.17 Aligned_cols=208 Identities=18% Similarity=0.206 Sum_probs=145.9
Q ss_pred eeeecCccEEEEEeccCCCC-CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHH
Q 019314 35 LLQQTSHQYLKFLNSIEYPT-SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKS 113 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~~-~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 113 (343)
.+.+..|..+......++.. .++|++.||...+... ...+ |..|....++.|+.+|++|+|.|.+.+.. ..
T Consensus 39 ~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq-----~~~~-~~~l~~~ln~nv~~~DYSGyG~S~G~psE--~n 110 (258)
T KOG1552|consen 39 KVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQ-----MVEL-FKELSIFLNCNVVSYDYSGYGRSSGKPSE--RN 110 (258)
T ss_pred EeecCCCCEEEEEEEcCccccceEEEEcCCcccchHH-----HHHH-HHHHhhcccceEEEEecccccccCCCccc--cc
Confidence 44455555555444444333 4899999999766665 4344 36776666899999999999999865532 14
Q ss_pred HHHHHHHHHHHh----CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchH
Q 019314 114 LALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQW 189 (343)
Q Consensus 114 ~~~di~~~l~~l----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (343)
..+|+.++-+.+ |.+++++|+|+|+|+..++.+|.+.| +.++||.+|.....
T Consensus 111 ~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~---------------------- 166 (258)
T KOG1552|consen 111 LYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGM---------------------- 166 (258)
T ss_pred chhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhh----------------------
Confidence 445555555544 32379999999999999999999998 99999999963210
Q ss_pred HHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCC
Q 019314 190 ALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPM 269 (343)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (343)
+..++.. ... |.++..
T Consensus 167 -----------------rv~~~~~---------------~~~--------------------------------~~~d~f 182 (258)
T KOG1552|consen 167 -----------------RVAFPDT---------------KTT--------------------------------YCFDAF 182 (258)
T ss_pred -----------------hhhccCc---------------ceE--------------------------------Eeeccc
Confidence 0000000 000 001111
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCc-eEEEcCCCCCccccCcchHHHHHHHHHccc
Q 019314 270 DLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWI-RYHEIPGSGHLIADADGMTEAIIKALLLGE 338 (343)
Q Consensus 270 ~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ep~~~~~~i~~fl~~~ 338 (343)
.....++.|+||||++||+.|.+++......+.+..++. +-..+.|+||.-..-..++.+.+..|+...
T Consensus 183 ~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 183 PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRRFISSV 252 (258)
T ss_pred cccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHHHHHHHHHHHh
Confidence 112348899999999999999999999999999999875 778888999987765667888888887654
No 61
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.87 E-value=1e-20 Score=139.79 Aligned_cols=219 Identities=16% Similarity=0.162 Sum_probs=144.3
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCc-cHHHHHHHHHHHHHHhCCC--CeE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKR-TRKSLALDIEELADQLGLG--SKF 131 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~di~~~l~~l~~~--~~~ 131 (343)
...+|++||+-.+... .+...++ ..+.+. |+.++.+|++|.|+|+..-.+ .....|+|+..+++++.-. .--
T Consensus 33 ~e~vvlcHGfrS~Kn~---~~~~~vA-~~~e~~-gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~ 107 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNA---IIMKNVA-KALEKE-GISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVP 107 (269)
T ss_pred ceEEEEeeccccccch---HHHHHHH-HHHHhc-CceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEE
Confidence 5689999999988776 2244555 566555 999999999999999876654 5566679999999998421 234
Q ss_pred EEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCC
Q 019314 132 YVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFP 211 (343)
Q Consensus 132 ~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (343)
+++|||-||.+++.+|.++++ +.-+|.+++.... ..... .+..+....+...+.++.
T Consensus 108 vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl------~~~I~----------------eRlg~~~l~~ike~Gfid 164 (269)
T KOG4667|consen 108 VILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDL------KNGIN----------------ERLGEDYLERIKEQGFID 164 (269)
T ss_pred EEEeecCccHHHHHHHHhhcC-chheEEcccccch------hcchh----------------hhhcccHHHHHHhCCcee
Confidence 689999999999999999987 8888888775331 00000 011122222222222222
Q ss_pred cchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCC--CCCcEEEEecCC
Q 019314 212 PSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPN--SEGSVHLWQGDE 289 (343)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~Pvl~i~G~~ 289 (343)
........+..++++.. ...+.. ++.+.+++ .+||||-+||..
T Consensus 165 ~~~rkG~y~~rvt~eSl---------------------mdrLnt--------------d~h~aclkId~~C~VLTvhGs~ 209 (269)
T KOG4667|consen 165 VGPRKGKYGYRVTEESL---------------------MDRLNT--------------DIHEACLKIDKQCRVLTVHGSE 209 (269)
T ss_pred cCcccCCcCceecHHHH---------------------HHHHhc--------------hhhhhhcCcCccCceEEEeccC
Confidence 11111111222221110 011111 11112333 358899999999
Q ss_pred CCCCChhHHHHHhhcCCCceEEEcCCCCCccccCcchHHHHHHHHHc
Q 019314 290 DRLVPVILQRYISKKLPWIRYHEIPGSGHLIADADGMTEAIIKALLL 336 (343)
Q Consensus 290 D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ep~~~~~~i~~fl~ 336 (343)
|.++|.+.+.++++.+|+-++.++||+.|......++...+...|.+
T Consensus 210 D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 210 DEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQLVSLGLEFIK 256 (269)
T ss_pred CceeechhHHHHHHhccCCceEEecCCCcCccchhhhHhhhcceeEE
Confidence 99999999999999999999999999999988766666666666654
No 62
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.86 E-value=1.8e-19 Score=148.21 Aligned_cols=267 Identities=21% Similarity=0.174 Sum_probs=153.6
Q ss_pred ecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHc-CcEEEEecCCCcccCCCCCCccHHHHHH
Q 019314 38 QTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDEL-GIYIVSFDRPGYGESDPDPKRTRKSLAL 116 (343)
Q Consensus 38 ~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 116 (343)
...+..+.|...+.. +++++++||++++... |.... ..+.... .|+|+++|+||||.|. ...++....++
T Consensus 6 ~~~~~~~~~~~~~~~--~~~i~~~hg~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~d~~g~g~s~-~~~~~~~~~~~ 76 (282)
T COG0596 6 AADGVRLAYREAGGG--GPPLVLLHGFPGSSSV-----WRPVF-KVLPALAARYRVIAPDLRGHGRSD-PAGYSLSAYAD 76 (282)
T ss_pred cCCCeEEEEeecCCC--CCeEEEeCCCCCchhh-----hHHHH-HHhhccccceEEEEecccCCCCCC-cccccHHHHHH
Confidence 345667778877753 6699999999999999 76632 3333321 1899999999999997 11245555599
Q ss_pred HHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccC-CCCC----ccchHHHHhhccccchHHH
Q 019314 117 DIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWW-PGFP----ANLTKEAYYLQLPQDQWAL 191 (343)
Q Consensus 117 di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~ 191 (343)
++..+++.++. .+++++|||+||.+++.++.++|+++++++++++...... .... ................
T Consensus 77 ~~~~~~~~~~~-~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 152 (282)
T COG0596 77 DLAALLDALGL-EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLD--- 152 (282)
T ss_pred HHHHHHHHhCC-CceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccc---
Confidence 99999999998 5899999999999999999999999999999998643100 0000 0000000000000000
Q ss_pred HHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCC
Q 019314 192 RVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDL 271 (343)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
............+..... ...................... .............. . .... ..
T Consensus 153 -----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~-----~~~~-~~ 213 (282)
T COG0596 153 -----AAAFAALLAALGLLAALA--AAARAGLAEALRAPLLGAAAAA---FARAARADLAAALL---A-----LLDR-DL 213 (282)
T ss_pred -----hhhhhhhhhccccccccc--ccchhccccccccccchhHhhh---hhhhcccccchhhh---c-----cccc-cc
Confidence 000000000000000000 0000000000000000000000 00000000000000 0 0000 22
Q ss_pred CCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCC-ceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 272 ENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPW-IRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 272 ~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
....+++++|+++++|++|.+.|......+.+..++ .++.+++++||+++.+ |+.+.+.+.+|++
T Consensus 214 ~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 214 RAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred chhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 334778889999999999977776667778888885 8999999999999997 8888888887544
No 63
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.84 E-value=1.8e-20 Score=139.45 Aligned_cols=144 Identities=26% Similarity=0.424 Sum_probs=110.0
Q ss_pred eEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 019314 57 LHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGF 136 (343)
Q Consensus 57 ~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~ 136 (343)
+||++||++++... |..++ ..+.+. ||.|+.+|+||+|.+... ...+++.+++. .+..+. ++++++||
T Consensus 1 ~vv~~HG~~~~~~~-----~~~~~-~~l~~~-G~~v~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~-~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-----YQPLA-EALAEQ-GYAVVAFDYPGHGDSDGA--DAVERVLADIR--AGYPDP-DRIILIGH 68 (145)
T ss_dssp EEEEECTTTTTTHH-----HHHHH-HHHHHT-TEEEEEESCTTSTTSHHS--HHHHHHHHHHH--HHHCTC-CEEEEEEE
T ss_pred CEEEECCCCCCHHH-----HHHHH-HHHHHC-CCEEEEEecCCCCccchh--HHHHHHHHHHH--hhcCCC-CcEEEEEE
Confidence 58999999999888 88887 888877 999999999999988321 12222222222 111355 79999999
Q ss_pred cccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcchhc
Q 019314 137 SMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVV 216 (343)
Q Consensus 137 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (343)
|+||.+++.++.++ .+++++|++++...
T Consensus 69 S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~--------------------------------------------------- 96 (145)
T PF12695_consen 69 SMGGAIAANLAARN-PRVKAVVLLSPYPD--------------------------------------------------- 96 (145)
T ss_dssp THHHHHHHHHHHHS-TTESEEEEESESSG---------------------------------------------------
T ss_pred ccCcHHHHHHhhhc-cceeEEEEecCccc---------------------------------------------------
Confidence 99999999999988 68999999998200
Q ss_pred ccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChh
Q 019314 217 ARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVI 296 (343)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~ 296 (343)
. + .+.+.+.|+++++|++|.++|.+
T Consensus 97 -------~----~--------------------------------------------~~~~~~~pv~~i~g~~D~~~~~~ 121 (145)
T PF12695_consen 97 -------S----E--------------------------------------------DLAKIRIPVLFIHGENDPLVPPE 121 (145)
T ss_dssp -------C----H--------------------------------------------HHTTTTSEEEEEEETT-SSSHHH
T ss_pred -------h----h--------------------------------------------hhhccCCcEEEEEECCCCcCCHH
Confidence 0 0 03344447999999999999999
Q ss_pred HHHHHhhcCC-CceEEEcCCCCCc
Q 019314 297 LQRYISKKLP-WIRYHEIPGSGHL 319 (343)
Q Consensus 297 ~~~~~~~~~~-~~~~~~~~~~gH~ 319 (343)
..+.+.+.++ +.++++++|++|+
T Consensus 122 ~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 122 QVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHHHCSSEEEEEETTS-TT
T ss_pred HHHHHHHHcCCCcEEEEeCCCcCc
Confidence 9999888877 5799999999996
No 64
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.84 E-value=1.5e-19 Score=172.93 Aligned_cols=261 Identities=12% Similarity=0.065 Sum_probs=145.3
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhh-----hhHHHHhHcCcEEEEecCCCcccCCCCCC---ccHHHHHHHHHHHHHH-
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACL-----SFQEVVDELGIYIVSFDRPGYGESDPDPK---RTRKSLALDIEELADQ- 124 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~-----~~~~l~~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~di~~~l~~- 124 (343)
.+++|||+||++.+... |+.+ + +.|.++ ||+|+++|+ |.++.+.. .++.+++..+.+.++.
T Consensus 66 ~~~plllvhg~~~~~~~-----~d~~~~~s~v-~~L~~~-g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v 135 (994)
T PRK07868 66 VGPPVLMVHPMMMSADM-----WDVTRDDGAV-GILHRA-GLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTV 135 (994)
T ss_pred CCCcEEEECCCCCCccc-----eecCCcccHH-HHHHHC-CCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHH
Confidence 57899999999999999 7654 5 667665 899999995 56654332 4666776666666654
Q ss_pred --hCCCCeEEEEEecccHHHHHHHHHHh-hcccceeEEEcccccccCCCCCccchHHH-----------HhhccccchHH
Q 019314 125 --LGLGSKFYVVGFSMGGQVVWSCLKYI-SHRLTGAALIAPVINYWWPGFPANLTKEA-----------YYLQLPQDQWA 190 (343)
Q Consensus 125 --l~~~~~~~lvG~S~Gg~~a~~~a~~~-p~~v~~lil~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 190 (343)
+.. ++++++||||||.+++.+++.+ +++|+++|++++..++...... ...... .........+.
T Consensus 136 ~~~~~-~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 213 (994)
T PRK07868 136 KDVTG-RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPM-GIPAGLAAAAADFMADHVFNRLDIPGWM 213 (994)
T ss_pred HHhhC-CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcc-cchhhhhhcccccchhhhhhcCCCCHHH
Confidence 344 5899999999999999998755 5589999999987654322110 000000 00000000000
Q ss_pred HHH----hhhchHHHhhh-hccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCC-
Q 019314 191 LRV----AHYAPWLAYWW-NTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTW- 264 (343)
Q Consensus 191 ~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 264 (343)
... ........... ....+.. .....++ +....+....... .........+...........
T Consensus 214 ~~~~~~~l~p~~~~~~~~~~~~~l~~-------~~~~~~~---e~~~~~~~~~~w~--~~~g~~~~~~~~~~~~~n~~~~ 281 (994)
T PRK07868 214 ARTGFQMLDPVKTAKARVDFLRQLHD-------REALLPR---EQQRRFLESEGWI--AWSGPAISELLKQFIAHNRMMT 281 (994)
T ss_pred HHHHHHhcChhHHHHHHHHHHHhcCc-------hhhhccc---hhhHhHHHHhhcc--ccchHHHHHHHHHHHHhCcccC
Confidence 000 00000000000 0000000 0000000 0011111000000 000000111111111000000
Q ss_pred -CCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceE-EEcCCCCCcccc---C-cchHHHHHHHHHccc
Q 019314 265 -EFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRY-HEIPGSGHLIAD---A-DGMTEAIIKALLLGE 338 (343)
Q Consensus 265 -~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---e-p~~~~~~i~~fl~~~ 338 (343)
.+....-...+.+|++|+|+|+|++|.++|++..+.+.+.++++++ .+++++||+.+. . ++.+-..|.+||.+.
T Consensus 282 g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 282 GGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred ceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 0011111124889999999999999999999999999999999987 678999999877 2 778888899999764
No 65
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.84 E-value=2e-19 Score=145.37 Aligned_cols=289 Identities=18% Similarity=0.097 Sum_probs=163.2
Q ss_pred ecCccEEEEEeccCC--CCCCeEEEecCCCCCcccchhh------hhhhhhhHH--HHhHcCcEEEEecCCCcc-cCCCC
Q 019314 38 QTSHQYLKFLNSIEY--PTSLLHLNFHLFNGCVGSLNFT------VLACLSFQE--VVDELGIYIVSFDRPGYG-ESDPD 106 (343)
Q Consensus 38 ~~~~~~l~y~~~g~~--~~~~~vv~ihG~~~~~~~~~~~------~~~~~~~~~--l~~~~g~~vi~~D~~G~G-~S~~~ 106 (343)
..++.++.|+.+|.- ....+||++|++++++...... .|..++ .. -.+...|.||+.|-.|.+ .|+.+
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~li-GpG~~iDt~r~fvIc~NvlG~c~GStgP 110 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLI-GPGKPIDTERFFVICTNVLGGCKGSTGP 110 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhc-CCCCCCCccceEEEEecCCCCCCCCCCC
Confidence 456788999999972 2356899999999977663211 243332 21 011114899999999976 44322
Q ss_pred --------------CCccHHHHHHHHHHHHHHhCCCCeEE-EEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCC
Q 019314 107 --------------PKRTRKSLALDIEELADQLGLGSKFY-VVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGF 171 (343)
Q Consensus 107 --------------~~~~~~~~~~di~~~l~~l~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~ 171 (343)
+..++.|+++--..++++||+ +++. |||-||||+.|+.++..|||+|.++|.+++.....
T Consensus 111 ~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI-~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s---- 185 (368)
T COG2021 111 SSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGI-KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLS---- 185 (368)
T ss_pred CCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCc-ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCC----
Confidence 124888999999999999999 5665 99999999999999999999999999999865421
Q ss_pred Cccch-HHHHhhcc-ccc-------------hHHHHHhhhchHHHhh---hhccCCCCcchhcccCccccchhhhhhhhH
Q 019314 172 PANLT-KEAYYLQL-PQD-------------QWALRVAHYAPWLAYW---WNTQKLFPPSAVVARRPEIFSAQDVQLMPK 233 (343)
Q Consensus 172 ~~~~~-~~~~~~~~-~~~-------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (343)
+.... .....+.. ... ....++++....+.+. ...+++-.... ..+.... ........
T Consensus 186 ~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~---~~~~~~~-~~~f~vES 261 (368)
T COG2021 186 AQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQ---ADPLRGG-GVRFAVES 261 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhccccc---ccccCCC-chhHHHHH
Confidence 11100 00000000 000 0111111111111110 00000000000 0000000 00001111
Q ss_pred HHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCce-EEE
Q 019314 234 LAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIR-YHE 312 (343)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~-~~~ 312 (343)
+...........-......+....... .+......++...+.+|++|++++.-+.|.++|++..+.+.+.++.+. +++
T Consensus 262 YL~~qg~kf~~rfDaNsYL~lt~ald~-~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~ 340 (368)
T COG2021 262 YLDYQGDKFVARFDANSYLYLTRALDY-HDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALRE 340 (368)
T ss_pred HHHHHHHHHHhccCcchHHHHHHHHHh-cCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEE
Confidence 111111000000000001111111110 001111123444588999999999999999999999999999998776 666
Q ss_pred cC-CCCCcccc-CcchHHHHHHHHHcc
Q 019314 313 IP-GSGHLIAD-ADGMTEAIIKALLLG 337 (343)
Q Consensus 313 ~~-~~gH~~~~-ep~~~~~~i~~fl~~ 337 (343)
++ ..||..++ |.+.+...|.+||+.
T Consensus 341 i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 341 IDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred ecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 54 57999999 688899999999975
No 66
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.83 E-value=1.2e-19 Score=134.39 Aligned_cols=219 Identities=21% Similarity=0.272 Sum_probs=152.1
Q ss_pred eeeeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHH
Q 019314 34 LLLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKS 113 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 113 (343)
..+.+.|..+++-..--++.+.|+++++||..++... .-+++ .-+....+..|+.+++||+|.|.+.+. -+.
T Consensus 57 i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGh-----r~~i~-~~fy~~l~mnv~ivsYRGYG~S~Gsps--E~G 128 (300)
T KOG4391|consen 57 IELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGH-----RLPIA-RVFYVNLKMNVLIVSYRGYGKSEGSPS--EEG 128 (300)
T ss_pred EEEEcCcceeEeeeeecccCCCceEEEEccCCCcccc-----hhhHH-HHHHHHcCceEEEEEeeccccCCCCcc--ccc
Confidence 3566778888875444455578999999999999888 66777 666667789999999999999986543 223
Q ss_pred HHHHHHHHHHHh------CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccc
Q 019314 114 LALDIEELADQL------GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQD 187 (343)
Q Consensus 114 ~~~di~~~l~~l------~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
+.-|-+.+++++ +- .++++.|-|.||.+|+.+|++..+++.++|+-+.... .|.....
T Consensus 129 L~lDs~avldyl~t~~~~dk-tkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~S-----Ip~~~i~---------- 192 (300)
T KOG4391|consen 129 LKLDSEAVLDYLMTRPDLDK-TKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLS-----IPHMAIP---------- 192 (300)
T ss_pred eeccHHHHHHHHhcCccCCc-ceEEEEecccCCeeEEEeeccchhheeeeeeechhcc-----chhhhhh----------
Confidence 334444555554 33 6899999999999999999999999999999887532 1110000
Q ss_pred hHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCC
Q 019314 188 QWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFD 267 (343)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
..+ + + ..+.+..+-. +..+...
T Consensus 193 --------------------~v~---------p--~---~~k~i~~lc~--------------kn~~~S~---------- 214 (300)
T KOG4391|consen 193 --------------------LVF---------P--F---PMKYIPLLCY--------------KNKWLSY---------- 214 (300)
T ss_pred --------------------eec---------c--c---hhhHHHHHHH--------------Hhhhcch----------
Confidence 000 0 0 0000000000 0000000
Q ss_pred CCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCC--CceEEEcCCCCCccccCcchHHHHHHHHHcccc
Q 019314 268 PMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP--WIRYHEIPGSGHLIADADGMTEAIIKALLLGEK 339 (343)
Q Consensus 268 ~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~ep~~~~~~i~~fl~~~~ 339 (343)
+ .+.+-++|.|+|.|..|.++|+...+.+.+.+| +.++..+|++.|.-..--+-.-++|.+||.+..
T Consensus 215 --~---ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 215 --R---KIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVV 283 (300)
T ss_pred --h---hhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHHHhc
Confidence 0 144556679999999999999999999999997 468999999999876666777889999997653
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.80 E-value=1.4e-18 Score=139.63 Aligned_cols=106 Identities=15% Similarity=0.199 Sum_probs=84.7
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-CccHHHHHHHHHHHHHHh---CCCCe
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLALDIEELADQL---GLGSK 130 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~di~~~l~~l---~~~~~ 130 (343)
.++||++||++.....+. ..|..++ +.|.+. ||+|+++|+||||.|+... ..+.+.+++|+.++++.+ +. ++
T Consensus 25 ~~~VlllHG~g~~~~~~~-~~~~~la-~~La~~-Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~-~~ 100 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSR-RMVALQA-RAFAAG-GFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGH-PP 100 (266)
T ss_pred ceEEEEECCCcccccchh-HHHHHHH-HHHHHC-CCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCC-CC
Confidence 578999999986543311 1166666 777655 9999999999999997543 357788888887765544 55 69
Q ss_pred EEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 131 FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 131 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
++|+||||||.+++.+|.++|++++++|+++|..
T Consensus 101 v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 101 VTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred EEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 9999999999999999999999999999999863
No 68
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.80 E-value=5.7e-18 Score=134.75 Aligned_cols=267 Identities=15% Similarity=0.111 Sum_probs=142.8
Q ss_pred eeeecCccEEE--EEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCC-CCccH
Q 019314 35 LLQQTSHQYLK--FLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPD-PKRTR 111 (343)
Q Consensus 35 ~~~~~~~~~l~--y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~~~ 111 (343)
.+...+|..+. +.+......+|.||++||+.+++.+ .+-+.++ ..+.++ ||.|+++++|||+.+... +...-
T Consensus 53 ~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s---~y~r~L~-~~~~~r-g~~~Vv~~~Rgcs~~~n~~p~~yh 127 (345)
T COG0429 53 RLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNS---PYARGLM-RALSRR-GWLVVVFHFRGCSGEANTSPRLYH 127 (345)
T ss_pred EEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcC---HHHHHHH-HHHHhc-CCeEEEEecccccCCcccCcceec
Confidence 56666665544 3343434567899999999998888 3345554 556555 999999999999988742 22222
Q ss_pred HHHHHHHHHHHHHh---CCCCeEEEEEecccH-HHHHHHHHHhhc-ccceeEEEcccccccCC--CCCccchHHHHhhcc
Q 019314 112 KSLALDIEELADQL---GLGSKFYVVGFSMGG-QVVWSCLKYISH-RLTGAALIAPVINYWWP--GFPANLTKEAYYLQL 184 (343)
Q Consensus 112 ~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg-~~a~~~a~~~p~-~v~~lil~~~~~~~~~~--~~~~~~~~~~~~~~~ 184 (343)
.-..+|+..+++.+ ....++..+|.|+|| +++..++..-.+ .+.+.+.++...+.... .+........+..
T Consensus 128 ~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r-- 205 (345)
T COG0429 128 SGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSR-- 205 (345)
T ss_pred ccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHH--
Confidence 22236666666655 223799999999999 555555544222 46666666654321000 0000000000000
Q ss_pred ccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhh----chhhhHHHHHhc
Q 019314 185 PQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQG----VHESLFRDMMIG 260 (343)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 260 (343)
.....+.+.+..-. ..+ .........+.+++......+....+... ....+++..
T Consensus 206 ---~l~~~L~~~~~~kl------~~l---------~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~a--- 264 (345)
T COG0429 206 ---YLLRNLKRNAARKL------KEL---------EPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQA--- 264 (345)
T ss_pred ---HHHHHHHHHHHHHH------Hhc---------CcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhc---
Confidence 00000000000000 000 00001110111221111111111111111 111111111
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhh-cCCCceEEEcCCCCCccccC-----cc-hHHHHHHH
Q 019314 261 FGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISK-KLPWIRYHEIPGSGHLIADA-----DG-MTEAIIKA 333 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~e-----p~-~~~~~i~~ 333 (343)
.-...+++|++|+|+|++.+|++++++....... ..|++.+..-+.+||..++. +. ...+.+.+
T Consensus 265 ---------Ss~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~ 335 (345)
T COG0429 265 ---------SSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILD 335 (345)
T ss_pred ---------cccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHH
Confidence 2222389999999999999999999887766665 67889999999999988874 22 56677778
Q ss_pred HHccc
Q 019314 334 LLLGE 338 (343)
Q Consensus 334 fl~~~ 338 (343)
|++..
T Consensus 336 ~l~~~ 340 (345)
T COG0429 336 WLDPF 340 (345)
T ss_pred HHHHH
Confidence 87643
No 69
>PRK11460 putative hydrolase; Provisional
Probab=99.79 E-value=6e-18 Score=135.06 Aligned_cols=172 Identities=16% Similarity=0.127 Sum_probs=114.4
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCC------------CCc---cHHHHHHH
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPD------------PKR---TRKSLALD 117 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~------------~~~---~~~~~~~d 117 (343)
+..+.||++||++++... |.+++ +.|.+. ++.+..++.+|...+... ... ++.+..+.
T Consensus 14 ~~~~~vIlLHG~G~~~~~-----~~~l~-~~l~~~-~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~ 86 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVA-----MGEIG-SWFAPA-FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPT 86 (232)
T ss_pred CCCcEEEEEeCCCCChHH-----HHHHH-HHHHHH-CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHH
Confidence 457899999999999999 99987 888765 444445555554322100 001 12232333
Q ss_pred HHHHHH----HhCCC-CeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHH
Q 019314 118 IEELAD----QLGLG-SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALR 192 (343)
Q Consensus 118 i~~~l~----~l~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (343)
+.++++ ..+++ ++++++|+|+||.+++.++.++|+.+.+++.+++...
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------------------------- 139 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------------------------- 139 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc---------------------------
Confidence 333333 33432 5899999999999999999999988887877765210
Q ss_pred HhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCC
Q 019314 193 VAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLE 272 (343)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (343)
. ...
T Consensus 140 ----------------------------~-~~~----------------------------------------------- 143 (232)
T PRK11460 140 ----------------------------S-LPE----------------------------------------------- 143 (232)
T ss_pred ----------------------------c-ccc-----------------------------------------------
Confidence 0 000
Q ss_pred CCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCC----CceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 273 NPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP----WIRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 273 ~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
.+..++|+++++|++|+++|.+.++.+.+.+. ++++++++++||.+..+ -+.+.+.+.+++.
T Consensus 144 --~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 144 --TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred --cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 01123569999999999999998887777663 46888999999998754 5555555555553
No 70
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.79 E-value=3.1e-17 Score=134.86 Aligned_cols=121 Identities=17% Similarity=0.167 Sum_probs=87.4
Q ss_pred eecCccEEEEEeccC----CCCCCeEEEecCCCCCcccchhhhhhh--hhhHHHHhHcCcEEEEecC--CCcccCCCC--
Q 019314 37 QQTSHQYLKFLNSIE----YPTSLLHLNFHLFNGCVGSLNFTVLAC--LSFQEVVDELGIYIVSFDR--PGYGESDPD-- 106 (343)
Q Consensus 37 ~~~~~~~l~y~~~g~----~~~~~~vv~ihG~~~~~~~~~~~~~~~--~~~~~l~~~~g~~vi~~D~--~G~G~S~~~-- 106 (343)
....+..+.|..+.+ ....|+|+++||++++... |.. .+ ..++++.||.|++||. +|+|.+...
T Consensus 20 s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~-----~~~~~~~-~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~ 93 (275)
T TIGR02821 20 SETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHEN-----FMIKAGA-QRFAAEHGLALVAPDTSPRGTGIAGEDDA 93 (275)
T ss_pred ccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccH-----HHhhhHH-HHHHhhcCcEEEEeCCCCCcCCCCCCccc
Confidence 445566666666544 2346899999999999888 532 22 5676666999999998 555432210
Q ss_pred -------------------CCccH-HHHHHHHHHHHHH---hCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 107 -------------------PKRTR-KSLALDIEELADQ---LGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 107 -------------------~~~~~-~~~~~di~~~l~~---l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
..++. ...++++..+++. ++. +++.++||||||.+|+.++.++|+.+++++++++.
T Consensus 94 w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 94 WDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDG-ERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred ccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCC-CceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 01122 3346778787876 344 58999999999999999999999999999999986
Q ss_pred c
Q 019314 164 I 164 (343)
Q Consensus 164 ~ 164 (343)
.
T Consensus 173 ~ 173 (275)
T TIGR02821 173 V 173 (275)
T ss_pred c
Confidence 4
No 71
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.78 E-value=8.6e-17 Score=125.41 Aligned_cols=111 Identities=22% Similarity=0.294 Sum_probs=94.1
Q ss_pred EEEeccC-CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC--ccHHHHHHHHHHH
Q 019314 45 KFLNSIE-YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK--RTRKSLALDIEEL 121 (343)
Q Consensus 45 ~y~~~g~-~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~di~~~ 121 (343)
-|.+..+ ++...+||-+||.+++... |+-+. +.|.+. |.|+|.+++||+|.+++.+. ++-.+-..-+.++
T Consensus 24 ~y~D~~~~gs~~gTVv~~hGsPGSH~D-----FkYi~-~~l~~~-~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~l 96 (297)
T PF06342_consen 24 VYEDSLPSGSPLGTVVAFHGSPGSHND-----FKYIR-PPLDEA-GIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNAL 96 (297)
T ss_pred EEEecCCCCCCceeEEEecCCCCCccc-----hhhhh-hHHHHc-CeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHH
Confidence 3555544 2234589999999999999 88776 666655 99999999999999987664 6888899999999
Q ss_pred HHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 122 ADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 122 l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
++.++++++++.+|||.|+-.|+.+|..+| +.++++++|..
T Consensus 97 l~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G 137 (297)
T PF06342_consen 97 LDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPG 137 (297)
T ss_pred HHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCc
Confidence 999999889999999999999999999986 67999999863
No 72
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.77 E-value=4.9e-17 Score=124.35 Aligned_cols=222 Identities=14% Similarity=0.096 Sum_probs=140.8
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCC-CCCccHHHHHHHHHHHHHHhCCCCeEE
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDP-DPKRTRKSLALDIEELADQLGLGSKFY 132 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~-~~~~~~~~~~~di~~~l~~l~~~~~~~ 132 (343)
.++.++++|-.|+++.. |+... ..+.. .+.++++++||+|.--. +.-.+++++++.|...+...-.++++.
T Consensus 6 ~~~~L~cfP~AGGsa~~-----fr~W~-~~lp~--~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~a 77 (244)
T COG3208 6 ARLRLFCFPHAGGSASL-----FRSWS-RRLPA--DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFA 77 (244)
T ss_pred CCceEEEecCCCCCHHH-----HHHHH-hhCCc--hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCee
Confidence 46789999999999999 77765 55554 38899999999997743 444699999999998888422237999
Q ss_pred EEEecccHHHHHHHHHHhhc---ccceeEEEcccccc-cCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccC
Q 019314 133 VVGFSMGGQVVWSCLKYISH---RLTGAALIAPVINY-WWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQK 208 (343)
Q Consensus 133 lvG~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (343)
++||||||++|.++|.+... .+.++.+.+...+. .............+.. .+. .. .
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~---------~l~-------~l----g 137 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLA---------DLV-------DL----G 137 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHH---------HHH-------Hh----C
Confidence 99999999999999987643 25666666654220 0000000000000000 000 00 0
Q ss_pred CCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecC
Q 019314 209 LFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGD 288 (343)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~ 288 (343)
.. .+..+.+ .+. ...+...++.|..... .++ ... -+.++||+.++.|+
T Consensus 138 G~--------p~e~led--~El---------------~~l~LPilRAD~~~~e-~Y~-----~~~-~~pl~~pi~~~~G~ 185 (244)
T COG3208 138 GT--------PPELLED--PEL---------------MALFLPILRADFRALE-SYR-----YPP-PAPLACPIHAFGGE 185 (244)
T ss_pred CC--------ChHHhcC--HHH---------------HHHHHHHHHHHHHHhc-ccc-----cCC-CCCcCcceEEeccC
Confidence 00 0011111 111 1111122233332211 111 111 24688999999999
Q ss_pred CCCCCChhHHHHHhhcCC-CceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 289 EDRLVPVILQRYISKKLP-WIRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 289 ~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
+|..++.+....+.+... ..++++++| ||+...+ .+++.+.|.+.+.
T Consensus 186 ~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 186 KDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred cchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhh
Confidence 999999999999998887 579999996 9999997 8888888888775
No 73
>PLN02442 S-formylglutathione hydrolase
Probab=99.76 E-value=9.3e-17 Score=132.23 Aligned_cols=122 Identities=19% Similarity=0.141 Sum_probs=82.9
Q ss_pred eecCccEEEEEeccC----CCCCCeEEEecCCCCCcccchhhhhhhhh-hHHHHhHcCcEEEEecCCCccc-----CCC-
Q 019314 37 QQTSHQYLKFLNSIE----YPTSLLHLNFHLFNGCVGSLNFTVLACLS-FQEVVDELGIYIVSFDRPGYGE-----SDP- 105 (343)
Q Consensus 37 ~~~~~~~l~y~~~g~----~~~~~~vv~ihG~~~~~~~~~~~~~~~~~-~~~l~~~~g~~vi~~D~~G~G~-----S~~- 105 (343)
...-+..+.|..+=| +...|+|+++||++++... |.... ...+....|+.|+.+|..++|. +..
T Consensus 25 s~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~-----~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~ 99 (283)
T PLN02442 25 SSTLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDEN-----FIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSW 99 (283)
T ss_pred ccccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHH-----HHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCcccc
Confidence 334556666665522 2346899999999988876 53321 0345555699999999887661 110
Q ss_pred ------------C-C--------CccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 106 ------------D-P--------KRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 106 ------------~-~--------~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
. . .+-.+++.+.+....+.++. ++++|+||||||..|+.++.++|+++++++++++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~-~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 100 DFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDT-SRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred ccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCC-CceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 0 0 01123344444444455677 689999999999999999999999999999999864
No 74
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.75 E-value=2.9e-16 Score=124.26 Aligned_cols=268 Identities=18% Similarity=0.152 Sum_probs=143.3
Q ss_pred eeecCccEEEEEeccCCC-CCCeEEEecCCCCCccc-chhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCC--CCC---
Q 019314 36 LQQTSHQYLKFLNSIEYP-TSLLHLNFHLFNGCVGS-LNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDP--DPK--- 108 (343)
Q Consensus 36 ~~~~~~~~l~y~~~g~~~-~~~~vv~ihG~~~~~~~-~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~--~~~--- 108 (343)
.+.+.-+.+++...|..+ .+|++|-.|-.+.+... |...+-.+-+ ..+.+ .|.++-+|.||+..-.. +.+
T Consensus 3 ~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m-~~i~~--~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 3 DVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDM-QEILQ--NFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp EEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHH-HHHHT--TSEEEEEE-TTTSTT-----TT---
T ss_pred eeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhH-HHHhh--ceEEEEEeCCCCCCCcccccccccc
Confidence 455667789999999733 48999999999877665 2222111222 44444 58999999999976542 333
Q ss_pred ccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccch
Q 019314 109 RTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQ 188 (343)
Q Consensus 109 ~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (343)
.+++++++++..+++++++ +.++.+|-..||.|..++|..||++|.++||+++... ...+.+........
T Consensus 80 Psmd~LAe~l~~Vl~~f~l-k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~-------~~gw~Ew~~~K~~~-- 149 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGL-KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCT-------AAGWMEWFYQKLSS-- 149 (283)
T ss_dssp --HHHHHCTHHHHHHHHT----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S----------HHHHHHHHHH---
T ss_pred cCHHHHHHHHHHHHHhCCc-cEEEEEeeccchhhhhhccccCccceeEEEEEecCCC-------CccHHHHHHHHHhc--
Confidence 3999999999999999999 7999999999999999999999999999999998632 11121111111110
Q ss_pred HHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCC
Q 019314 189 WALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDP 268 (343)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
+........+...+....+ .|..... ....+....+...- .....+.....+.+... ..
T Consensus 150 ~~L~~~gmt~~~~d~Ll~h-~Fg~~~~---------~~n~Dlv~~yr~~l---~~~~Np~Nl~~f~~sy~--------~R 208 (283)
T PF03096_consen 150 WLLYSYGMTSSVKDYLLWH-YFGKEEE---------ENNSDLVQTYRQHL---DERINPKNLALFLNSYN--------SR 208 (283)
T ss_dssp ------CTTS-HHHHHHHH-HS-HHHH---------HCT-HHHHHHHHHH---HT-TTHHHHHHHHHHHH--------T-
T ss_pred ccccccccccchHHhhhhc-ccccccc---------cccHHHHHHHHHHH---hcCCCHHHHHHHHHHHh--------cc
Confidence 0000011111111111111 1100000 00111111111100 00000011111111111 11
Q ss_pred CCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCC--CceEEEcCCCCCccccC-cchHHHHHHHHHcccc
Q 019314 269 MDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP--WIRYHEIPGSGHLIADA-DGMTEAIIKALLLGEK 339 (343)
Q Consensus 269 ~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~ 339 (343)
.++....+...||+|++.|+..+.. +.+.++..++. +.++..+++||=.+..| |+.+++.+.-|+++..
T Consensus 209 ~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G 280 (283)
T PF03096_consen 209 TDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMG 280 (283)
T ss_dssp ----SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTT
T ss_pred ccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccCC
Confidence 1455556777799999999887765 44556666663 46899999999999987 9999999999998753
No 75
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.75 E-value=2.8e-15 Score=116.83 Aligned_cols=267 Identities=16% Similarity=0.084 Sum_probs=161.8
Q ss_pred eeeecCccEEEEEeccCCC-CCCeEEEecCCCCCccc-chhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCC--CCC--
Q 019314 35 LLQQTSHQYLKFLNSIEYP-TSLLHLNFHLFNGCVGS-LNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDP--DPK-- 108 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~-~~~~vv~ihG~~~~~~~-~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~--~~~-- 108 (343)
+.+.+..+.+++..+|..+ .+|++|-.|..+.+... |...+..+-+ ..+.++ |.|+-+|.||+-.-.+ +.+
T Consensus 25 ~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m-~ei~~~--fcv~HV~~PGqe~gAp~~p~~y~ 101 (326)
T KOG2931|consen 25 HDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDM-AEILEH--FCVYHVDAPGQEDGAPSFPEGYP 101 (326)
T ss_pred eeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhH-HHHHhh--eEEEecCCCccccCCccCCCCCC
Confidence 4555566889999999732 47889999999977665 3222222333 555554 8999999999865432 333
Q ss_pred -ccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHH-Hhhcccc
Q 019314 109 -RTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEA-YYLQLPQ 186 (343)
Q Consensus 109 -~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 186 (343)
.+.++++++|..+++++++ +.++-+|...|+.|..++|..||++|.++||+++... ...+.+. +.+....
T Consensus 102 yPsmd~LAd~l~~VL~~f~l-k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~-------a~gwiew~~~K~~s~ 173 (326)
T KOG2931|consen 102 YPSMDDLADMLPEVLDHFGL-KSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC-------AKGWIEWAYNKVSSN 173 (326)
T ss_pred CCCHHHHHHHHHHHHHhcCc-ceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC-------CchHHHHHHHHHHHH
Confidence 3999999999999999999 7999999999999999999999999999999998532 1112111 1111111
Q ss_pred chHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCC
Q 019314 187 DQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEF 266 (343)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
......+....+++.-+ + .|.... ..-..+-.+.+++..... ........+.... ..
T Consensus 174 ~l~~~Gmt~~~~d~ll~---H-~Fg~e~------~~~~~diVq~Yr~~l~~~------~N~~Nl~~fl~ay---n~---- 230 (326)
T KOG2931|consen 174 LLYYYGMTQGVKDYLLA---H-HFGKEE------LGNNSDIVQEYRQHLGER------LNPKNLALFLNAY---NG---- 230 (326)
T ss_pred HHHhhchhhhHHHHHHH---H-Hhcccc------ccccHHHHHHHHHHHHhc------CChhHHHHHHHHh---cC----
Confidence 11111112222222211 1 111000 000111112222211110 0001111111111 11
Q ss_pred CCCCCCCC----CCCCCCcEEEEecCCCCCCChhHHHHHhhcCC--CceEEEcCCCCCccccC-cchHHHHHHHHHccc
Q 019314 267 DPMDLENP----FPNSEGSVHLWQGDEDRLVPVILQRYISKKLP--WIRYHEIPGSGHLIADA-DGMTEAIIKALLLGE 338 (343)
Q Consensus 267 ~~~~~~~~----~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~ 338 (343)
..++... ...++||+|++.|++.+.+ +.+..+..++. +..+..+.++|-.+..+ |.++++.+.-|+++.
T Consensus 231 -R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 231 -RRDLSIERPKLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred -CCCccccCCCcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 1122221 2266799999999988766 34555555553 56899999999999996 999999999999865
No 76
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.74 E-value=8.8e-16 Score=126.99 Aligned_cols=250 Identities=15% Similarity=0.149 Sum_probs=137.9
Q ss_pred eeeeecCccEEEEEec--cCC------CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCC
Q 019314 34 LLLQQTSHQYLKFLNS--IEY------PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDP 105 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~--g~~------~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~ 105 (343)
..++..||+.+.+.-. ... .+.|.||++||+.+++.. .+.+.++ .. +.+.||+|++++.||+|.|.-
T Consensus 96 eii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~---~YVr~lv-~~-a~~~G~r~VVfN~RG~~g~~L 170 (409)
T KOG1838|consen 96 EIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHE---SYVRHLV-HE-AQRKGYRVVVFNHRGLGGSKL 170 (409)
T ss_pred EEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChh---HHHHHHH-HH-HHhCCcEEEEECCCCCCCCcc
Confidence 4678889998887544 111 346999999999988877 3355554 34 444499999999999999974
Q ss_pred CCC-ccHHHHHHHHHHHHHHh----CCCCeEEEEEecccHHHHHHHHHHhhc---ccceeEEEcccccccCCCCCccchH
Q 019314 106 DPK-RTRKSLALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISH---RLTGAALIAPVINYWWPGFPANLTK 177 (343)
Q Consensus 106 ~~~-~~~~~~~~di~~~l~~l----~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~ 177 (343)
... .-...+.+|+.++++++ -. .+...+|.||||.+...|..+..+ .+.++++++|.-. . ...
T Consensus 171 tTpr~f~ag~t~Dl~~~v~~i~~~~P~-a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~-----~---~~~ 241 (409)
T KOG1838|consen 171 TTPRLFTAGWTEDLREVVNHIKKRYPQ-APLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDL-----L---AAS 241 (409)
T ss_pred CCCceeecCCHHHHHHHHHHHHHhCCC-CceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchh-----h---hhh
Confidence 332 23334455666666555 33 689999999999999999987544 3455555555311 0 111
Q ss_pred HHHhhccccchHHHHHhhhchHHHhhhhccC-CCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhh----chhh
Q 019314 178 EAYYLQLPQDQWALRVAHYAPWLAYWWNTQK-LFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQG----VHES 252 (343)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 252 (343)
..+............+.......... .+. ++.. ...+ +...+...-..+....+... ....
T Consensus 242 ~~~~~~~~~~~y~~~l~~~l~~~~~~--~r~~~~~~-------~vd~-----d~~~~~~SvreFD~~~t~~~~gf~~~de 307 (409)
T KOG1838|consen 242 RSIETPLYRRFYNRALTLNLKRIVLR--HRHTLFED-------PVDF-----DVILKSRSVREFDEALTRPMFGFKSVDE 307 (409)
T ss_pred hHHhcccchHHHHHHHHHhHHHHHhh--hhhhhhhc-------cchh-----hhhhhcCcHHHHHhhhhhhhcCCCcHHH
Confidence 11111111111111111111100000 000 0000 0000 00000000000011111111 0111
Q ss_pred hHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhH-HHHHhhcCCCceEEEcCCCCCccccC
Q 019314 253 LFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVIL-QRYISKKLPWIRYHEIPGSGHLIADA 323 (343)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e 323 (343)
++.. ......+++|++|+|+|++.+|+++|++. -....+..|++-+++-..+||..++|
T Consensus 308 YY~~------------aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfle 367 (409)
T KOG1838|consen 308 YYKK------------ASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLE 367 (409)
T ss_pred HHhh------------cchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeec
Confidence 1111 12333489999999999999999999854 35566667888888888899999886
No 77
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.74 E-value=5.5e-17 Score=147.33 Aligned_cols=227 Identities=14% Similarity=0.039 Sum_probs=139.5
Q ss_pred eeeeecCccEEEEEeccCCCC-----CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccC-----
Q 019314 34 LLLQQTSHQYLKFLNSIEYPT-----SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGES----- 103 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g~~~~-----~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S----- 103 (343)
..+...||.+++.....+... -|.||++||.+.....+. |.... +.|+.+ ||.|+.++.||.+.-
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~---~~~~~-q~~~~~-G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYS---FNPEI-QVLASA-GYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccc---cchhh-HHHhcC-CeEEEEeCCCCCCccHHHHH
Confidence 456677899999877765221 289999999986555522 33332 556655 999999999975442
Q ss_pred CCC----CCccHHHHHHHHHHHHHHhCC-C-CeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchH
Q 019314 104 DPD----PKRTRKSLALDIEELADQLGL-G-SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTK 177 (343)
Q Consensus 104 ~~~----~~~~~~~~~~di~~~l~~l~~-~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~ 177 (343)
+.. .....+|+.+.+. ++...+. + +++.|.|||+||.+++..+.+.| ++++.+...+..+-
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~----------- 509 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDW----------- 509 (620)
T ss_pred HhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchh-----------
Confidence 111 1125666666666 4444432 1 58999999999999999999988 67777777664321
Q ss_pred HHHhhccccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHH
Q 019314 178 EAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDM 257 (343)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (343)
......... .+...... ....... ..+.+..
T Consensus 510 ------------~~~~~~~~~---------~~~~~~~~---~~~~~~~-~~~~~~~------------------------ 540 (620)
T COG1506 510 ------------LLYFGESTE---------GLRFDPEE---NGGGPPE-DREKYED------------------------ 540 (620)
T ss_pred ------------hhhccccch---------hhcCCHHH---hCCCccc-ChHHHHh------------------------
Confidence 000000000 00000000 0000000 0000000
Q ss_pred HhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCC----CceEEEcCCCCCcccc-C-cchHHHHH
Q 019314 258 MIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP----WIRYHEIPGSGHLIAD-A-DGMTEAII 331 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e-p~~~~~~i 331 (343)
. .-.....++++|+|+|||++|..||.+.+..+.+.+. +++++++|+.+|.+.. + ...+.+.+
T Consensus 541 --------~---sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~ 609 (620)
T COG1506 541 --------R---SPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEI 609 (620)
T ss_pred --------c---ChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHH
Confidence 0 0001167899999999999999999998887777653 5789999999999887 4 45566667
Q ss_pred HHHHccc
Q 019314 332 KALLLGE 338 (343)
Q Consensus 332 ~~fl~~~ 338 (343)
.+|+++.
T Consensus 610 ~~~~~~~ 616 (620)
T COG1506 610 LDWFKRH 616 (620)
T ss_pred HHHHHHH
Confidence 7777643
No 78
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.73 E-value=1.4e-16 Score=126.39 Aligned_cols=183 Identities=16% Similarity=0.120 Sum_probs=108.4
Q ss_pred HHHHhHcCcEEEEecCCCcccCCC-----CCCccHHHHHHHHHHHHHHh------CCCCeEEEEEecccHHHHHHHHHHh
Q 019314 82 QEVVDELGIYIVSFDRPGYGESDP-----DPKRTRKSLALDIEELADQL------GLGSKFYVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 82 ~~l~~~~g~~vi~~D~~G~G~S~~-----~~~~~~~~~~~di~~~l~~l------~~~~~~~lvG~S~Gg~~a~~~a~~~ 150 (343)
..|+++ ||.|+.+|.||.+.... .....-....+|+.+.++.+ +. +++.++|+|+||.+++.++.++
T Consensus 8 ~~la~~-Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~-~ri~i~G~S~GG~~a~~~~~~~ 85 (213)
T PF00326_consen 8 QLLASQ-GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDP-DRIGIMGHSYGGYLALLAATQH 85 (213)
T ss_dssp HHHHTT-T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEE-EEEEEEEETHHHHHHHHHHHHT
T ss_pred HHHHhC-CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccc-eeEEEEcccccccccchhhccc
Confidence 455555 99999999999874321 11112223445555555544 33 6999999999999999999999
Q ss_pred hcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhh
Q 019314 151 SHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQL 230 (343)
Q Consensus 151 p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (343)
|+++++++..+|..+.... ...... +... ... ....+. ...+.
T Consensus 86 ~~~f~a~v~~~g~~d~~~~--~~~~~~--~~~~--------~~~---------------------~~~~~~----~~~~~ 128 (213)
T PF00326_consen 86 PDRFKAAVAGAGVSDLFSY--YGTTDI--YTKA--------EYL---------------------EYGDPW----DNPEF 128 (213)
T ss_dssp CCGSSEEEEESE-SSTTCS--BHHTCC--HHHG--------HHH---------------------HHSSTT----TSHHH
T ss_pred ceeeeeeeccceecchhcc--cccccc--cccc--------ccc---------------------ccCccc----hhhhh
Confidence 9999999999986542100 000000 0000 000 000000 00000
Q ss_pred hhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCC--CCCcEEEEecCCCCCCChhHHHHHhhcCC--
Q 019314 231 MPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPN--SEGSVHLWQGDEDRLVPVILQRYISKKLP-- 306 (343)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-- 306 (343)
+.. .... . ++.+ +++|+|+++|++|..||++.+..+.+.+.
T Consensus 129 ~~~-----------------------~s~~---------~---~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~ 173 (213)
T PF00326_consen 129 YRE-----------------------LSPI---------S---PADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKA 173 (213)
T ss_dssp HHH-----------------------HHHG---------G---GGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHT
T ss_pred hhh-----------------------hccc---------c---ccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhc
Confidence 000 0000 0 0223 77889999999999999998877776653
Q ss_pred --CceEEEcCCCCCcccc-C-cchHHHHHHHHHccc
Q 019314 307 --WIRYHEIPGSGHLIAD-A-DGMTEAIIKALLLGE 338 (343)
Q Consensus 307 --~~~~~~~~~~gH~~~~-e-p~~~~~~i~~fl~~~ 338 (343)
+++++++|++||.+.. + .....+.+.+|+++.
T Consensus 174 g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 174 GKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp TSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 4799999999997665 4 556777888888653
No 79
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.72 E-value=1.3e-16 Score=138.17 Aligned_cols=111 Identities=7% Similarity=0.041 Sum_probs=89.2
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHh----CCC
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL----GLG 128 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l----~~~ 128 (343)
..++|||++|.+-.-...+|...=++++ +.|.++ ||.|+++|+++-+.++ ...+++++++.+.+.++.+ +.
T Consensus 213 v~~~PLLIVPp~INK~YIlDL~P~~SlV-r~lv~q-G~~VflIsW~nP~~~~--r~~~ldDYv~~i~~Ald~V~~~tG~- 287 (560)
T TIGR01839 213 QHARPLLVVPPQINKFYIFDLSPEKSFV-QYCLKN-QLQVFIISWRNPDKAH--REWGLSTYVDALKEAVDAVRAITGS- 287 (560)
T ss_pred cCCCcEEEechhhhhhheeecCCcchHH-HHHHHc-CCeEEEEeCCCCChhh--cCCCHHHHHHHHHHHHHHHHHhcCC-
Confidence 4468999999999877775544335776 777776 9999999999877664 3458888888877777765 55
Q ss_pred CeEEEEEecccHHHHHH----HHHHhhc-ccceeEEEcccccccC
Q 019314 129 SKFYVVGFSMGGQVVWS----CLKYISH-RLTGAALIAPVINYWW 168 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~----~a~~~p~-~v~~lil~~~~~~~~~ 168 (343)
+++.++|||+||.++.. +++++++ +|++++++.+.+++..
T Consensus 288 ~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~ 332 (560)
T TIGR01839 288 RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTM 332 (560)
T ss_pred CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCC
Confidence 79999999999999996 7888886 8999999999887643
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.71 E-value=5.4e-16 Score=122.61 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=73.7
Q ss_pred CCCeEEEecCCCCCcccchhhhhhh--hhhHHHHhHcCcEEEEecCCCcccCCCCCC-----------ccHHHHHHHHHH
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLAC--LSFQEVVDELGIYIVSFDRPGYGESDPDPK-----------RTRKSLALDIEE 120 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~--~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-----------~~~~~~~~di~~ 120 (343)
..|.||++||.+.+... +.. - |..++++.||.|++||.+|++.+..... ....++.+.+..
T Consensus 12 ~~P~vv~lHG~~~~~~~-----~~~~~~-~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 85 (212)
T TIGR01840 12 PRALVLALHGCGQTASA-----YVIDWG-WKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDA 85 (212)
T ss_pred CCCEEEEeCCCCCCHHH-----HhhhcC-hHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHH
Confidence 47899999999988776 431 1 2566666799999999999875432100 112222222333
Q ss_pred HHHHhCCC-CeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 121 LADQLGLG-SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 121 ~l~~l~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
+.+..+++ ++++|+|||+||.+++.++.++|+.+.+++.+++.
T Consensus 86 ~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 86 VKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred HHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 33333332 58999999999999999999999999999999875
No 81
>PLN00021 chlorophyllase
Probab=99.69 E-value=1.9e-15 Score=124.99 Aligned_cols=100 Identities=18% Similarity=0.139 Sum_probs=74.0
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHH---HHHHHHHHHHH------
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKS---LALDIEELADQ------ 124 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~---~~~di~~~l~~------ 124 (343)
..|+||++||++.+... |..++ +.|++. ||.|+++|++|++.+.. ...+++ ..+.+.+.++.
T Consensus 51 ~~PvVv~lHG~~~~~~~-----y~~l~-~~Las~-G~~VvapD~~g~~~~~~--~~~i~d~~~~~~~l~~~l~~~l~~~~ 121 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSF-----YSQLL-QHIASH-GFIVVAPQLYTLAGPDG--TDEIKDAAAVINWLSSGLAAVLPEGV 121 (313)
T ss_pred CCCEEEEECCCCCCccc-----HHHHH-HHHHhC-CCEEEEecCCCcCCCCc--hhhHHHHHHHHHHHHhhhhhhccccc
Confidence 46899999999999888 88887 888766 99999999998754321 112222 22222222222
Q ss_pred -hCCCCeEEEEEecccHHHHHHHHHHhhc-----ccceeEEEccc
Q 019314 125 -LGLGSKFYVVGFSMGGQVVWSCLKYISH-----RLTGAALIAPV 163 (343)
Q Consensus 125 -l~~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lil~~~~ 163 (343)
.+. ++++++|||+||.+|+.+|.++++ +++++|+++|.
T Consensus 122 ~~d~-~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 122 RPDL-SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred ccCh-hheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 234 589999999999999999999875 58899999885
No 82
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.68 E-value=5.3e-16 Score=132.06 Aligned_cols=107 Identities=11% Similarity=0.125 Sum_probs=83.4
Q ss_pred CCCCeEEEecCCCCCc--ccchhhhhhh-hhhHHHHhHc-CcEEEEecCCCcccCCCCC-CccHHHHHHHHHHHHHHh--
Q 019314 53 PTSLLHLNFHLFNGCV--GSLNFTVLAC-LSFQEVVDEL-GIYIVSFDRPGYGESDPDP-KRTRKSLALDIEELADQL-- 125 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~--~~~~~~~~~~-~~~~~l~~~~-g~~vi~~D~~G~G~S~~~~-~~~~~~~~~di~~~l~~l-- 125 (343)
+.+|++|+|||++.+. .. |.+ ++ ..+.... .|+||++|++|+|.|..+. ......+++++.++++.+
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~-----w~~~l~-~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~ 112 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFES-----WVPKLV-AALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQE 112 (442)
T ss_pred CCCCeEEEECCCCcCCcchh-----hHHHHH-HHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHH
Confidence 4689999999998754 34 554 43 4554322 5999999999999886443 234567777888888765
Q ss_pred ----CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccc
Q 019314 126 ----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY 166 (343)
Q Consensus 126 ----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 166 (343)
++ ++++||||||||++|..++.++|++|.++++++|+.+.
T Consensus 113 ~~gl~l-~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 113 EFNYPW-DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred hhCCCC-CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 35 69999999999999999999999999999999997543
No 83
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.65 E-value=8.1e-15 Score=122.30 Aligned_cols=230 Identities=14% Similarity=0.146 Sum_probs=117.1
Q ss_pred cCccEEEEEeccC--CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-CccHHHHH
Q 019314 39 TSHQYLKFLNSIE--YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLA 115 (343)
Q Consensus 39 ~~~~~l~y~~~g~--~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~ 115 (343)
.+|.++.-...-+ +...|+||++.|+.+-... +..+. ......+|+.++++|.||.|.|...+ ..+.+.+.
T Consensus 172 ~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD-----~~~l~-~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~ 245 (411)
T PF06500_consen 172 FEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQED-----LYRLF-RDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLH 245 (411)
T ss_dssp ETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGG-----GHHHH-HCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHH
T ss_pred eCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHH-----HHHHH-HHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHH
Confidence 3455555333322 2234667777777666666 33332 44333449999999999999996432 22333444
Q ss_pred HHHHHHHHHh---CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHH
Q 019314 116 LDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALR 192 (343)
Q Consensus 116 ~di~~~l~~l---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (343)
+.+.+.+... +. .++.++|.|+||.+|.++|..+++|++++|..++.++.... ......
T Consensus 246 ~aVLd~L~~~p~VD~-~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft-------~~~~~~---------- 307 (411)
T PF06500_consen 246 QAVLDYLASRPWVDH-TRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFT-------DPEWQQ---------- 307 (411)
T ss_dssp HHHHHHHHHSTTEEE-EEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH--------HHHHT----------
T ss_pred HHHHHHHhcCCccCh-hheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhc-------cHHHHh----------
Confidence 4444444443 33 59999999999999999999999999999999997542100 000000
Q ss_pred HhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCC
Q 019314 193 VAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLE 272 (343)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (343)
..| .. ....+.. ..+....-..........|.+....+.
T Consensus 308 ---~~P----------------------~m----y~d~LA~------------rlG~~~~~~~~l~~el~~~SLk~qGlL 346 (411)
T PF06500_consen 308 ---RVP----------------------DM----YLDVLAS------------RLGMAAVSDESLRGELNKFSLKTQGLL 346 (411)
T ss_dssp ---TS-----------------------HH----HHHHHHH------------HCT-SCE-HHHHHHHGGGGSTTTTTTT
T ss_pred ---cCC----------------------HH----HHHHHHH------------HhCCccCCHHHHHHHHHhcCcchhccc
Confidence 000 00 0000000 000000000011111222333333331
Q ss_pred CCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCC-CccccCcchHHHHHHHHHcc
Q 019314 273 NPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSG-HLIADADGMTEAIIKALLLG 337 (343)
Q Consensus 273 ~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~ep~~~~~~i~~fl~~ 337 (343)
. -.+.++|+|.+.|++|+++|.+..+-+++.-.+.+...++... |..+ +.-...+.+||++
T Consensus 347 ~-~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~~~~gy---~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 347 S-GRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKPLHMGY---PQALDEIYKWLED 408 (411)
T ss_dssp T-SS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSSHHHHH---HHHHHHHHHHHHH
T ss_pred c-CCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCccccch---HHHHHHHHHHHHH
Confidence 0 1577889999999999999999999999888778888887544 3322 2445555666653
No 84
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.64 E-value=1.5e-14 Score=115.04 Aligned_cols=160 Identities=21% Similarity=0.275 Sum_probs=104.5
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-Cc-----------cHHHHHHHHHHH
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-KR-----------TRKSLALDIEEL 121 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~-----------~~~~~~~di~~~ 121 (343)
+.|.||++|+..+-... .+.++ +.|+++ ||.|++||+-+-....... .. ..+...+++.+.
T Consensus 13 ~~~~Vvv~~d~~G~~~~-----~~~~a-d~lA~~-Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa 85 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPN-----IRDLA-DRLAEE-GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAA 85 (218)
T ss_dssp SEEEEEEE-BTTBS-HH-----HHHHH-HHHHHT-T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCchH-----HHHHH-HHHHhc-CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHH
Confidence 47899999998887766 66777 888876 9999999986544411111 10 124566777777
Q ss_pred HHHhCC-----CCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhh
Q 019314 122 ADQLGL-----GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHY 196 (343)
Q Consensus 122 l~~l~~-----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (343)
++.+.- .+++.++|+|+||.+++.+|.+. +.+++.+..-|... +
T Consensus 86 ~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~------~------------------------ 134 (218)
T PF01738_consen 86 VDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP------P------------------------ 134 (218)
T ss_dssp HHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS------G------------------------
T ss_pred HHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC------C------------------------
Confidence 777621 15899999999999999999886 57888888776100 0
Q ss_pred chHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCC
Q 019314 197 APWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFP 276 (343)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (343)
.. .. . ..+
T Consensus 135 ---------------------------~~----~~--------------------------------------~---~~~ 142 (218)
T PF01738_consen 135 ---------------------------PP----PL--------------------------------------E---DAP 142 (218)
T ss_dssp ---------------------------GG----HH--------------------------------------H---HGG
T ss_pred ---------------------------Cc----ch--------------------------------------h---hhc
Confidence 00 00 0 045
Q ss_pred CCCCcEEEEecCCCCCCChhHHHHHhhcC----CCceEEEcCCCCCccccC
Q 019314 277 NSEGSVHLWQGDEDRLVPVILQRYISKKL----PWIRYHEIPGSGHLIADA 323 (343)
Q Consensus 277 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~e 323 (343)
++++|+++++|++|+.++.+..+.+.+.+ ...++++++|++|.+...
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~ 193 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANP 193 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTST
T ss_pred ccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCC
Confidence 56778999999999999998766655544 567999999999998873
No 85
>PRK10162 acetyl esterase; Provisional
Probab=99.63 E-value=6.4e-14 Score=117.44 Aligned_cols=115 Identities=11% Similarity=0.105 Sum_probs=78.4
Q ss_pred EEEEEeccC-CCCCCeEEEecCCC---CCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHH---H
Q 019314 43 YLKFLNSIE-YPTSLLHLNFHLFN---GCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSL---A 115 (343)
Q Consensus 43 ~l~y~~~g~-~~~~~~vv~ihG~~---~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~---~ 115 (343)
.+..+.+.+ ....|+||++||++ ++... |..++ ..|++..|+.|+++|+|...+..-+ ..++|. .
T Consensus 68 ~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~-----~~~~~-~~la~~~g~~Vv~vdYrlape~~~p--~~~~D~~~a~ 139 (318)
T PRK10162 68 QVETRLYYPQPDSQATLFYLHGGGFILGNLDT-----HDRIM-RLLASYSGCTVIGIDYTLSPEARFP--QAIEEIVAVC 139 (318)
T ss_pred ceEEEEECCCCCCCCEEEEEeCCcccCCCchh-----hhHHH-HHHHHHcCCEEEEecCCCCCCCCCC--CcHHHHHHHH
Confidence 344444333 23468999999987 55556 77776 8888777999999999976543211 123333 3
Q ss_pred HHHHHHHHHhCCC-CeEEEEEecccHHHHHHHHHHh------hcccceeEEEccccc
Q 019314 116 LDIEELADQLGLG-SKFYVVGFSMGGQVVWSCLKYI------SHRLTGAALIAPVIN 165 (343)
Q Consensus 116 ~di~~~l~~l~~~-~~~~lvG~S~Gg~~a~~~a~~~------p~~v~~lil~~~~~~ 165 (343)
+.+.+..+.++++ ++++|+|+|+||.+|+.++.+. +.++.+++++.|..+
T Consensus 140 ~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 140 CYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred HHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 3333334445542 5899999999999999999764 357899999988643
No 86
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.62 E-value=5.1e-14 Score=103.06 Aligned_cols=176 Identities=21% Similarity=0.220 Sum_probs=118.5
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHH---HhCCCC
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELAD---QLGLGS 129 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~---~l~~~~ 129 (343)
+..|..|++|.-+.-...-+...-..++ ..|.+ +||.++.+|+||.|+|.+.-+..+-+. +|..+.++ ....+.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la-~~l~~-~G~atlRfNfRgVG~S~G~fD~GiGE~-~Da~aaldW~~~~hp~s 102 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLA-RALVK-RGFATLRFNFRGVGRSQGEFDNGIGEL-EDAAAALDWLQARHPDS 102 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHH-HHHHh-CCceEEeecccccccccCcccCCcchH-HHHHHHHHHHHhhCCCc
Confidence 4577888888644222221112133443 44444 499999999999999998766543332 23333333 333322
Q ss_pred e-EEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccC
Q 019314 130 K-FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQK 208 (343)
Q Consensus 130 ~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (343)
+ ..+.|+|+|+.|++.+|.+.|+ ....+.+.|.++.
T Consensus 103 ~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~------------------------------------------ 139 (210)
T COG2945 103 ASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINA------------------------------------------ 139 (210)
T ss_pred hhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCc------------------------------------------
Confidence 3 3689999999999999999876 5555555553110
Q ss_pred CCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecC
Q 019314 209 LFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGD 288 (343)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~ 288 (343)
+.. .. +.-..+|.++|+|+
T Consensus 140 ----------------------~df------------------------------------s~---l~P~P~~~lvi~g~ 158 (210)
T COG2945 140 ----------------------YDF------------------------------------SF---LAPCPSPGLVIQGD 158 (210)
T ss_pred ----------------------hhh------------------------------------hh---ccCCCCCceeEecC
Confidence 000 00 22223459999999
Q ss_pred CCCCCChhHHHHHhhcCCCceEEEcCCCCCccccCcchHHHHHHHHHc
Q 019314 289 EDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADADGMTEAIIKALLL 336 (343)
Q Consensus 289 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ep~~~~~~i~~fl~ 336 (343)
.|.+++.....++++. ...+++++++++||++..-+.+.+.|.+|+.
T Consensus 159 ~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 159 ADDVVDLVAVLKWQES-IKITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred hhhhhcHHHHHHhhcC-CCCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 9999999888888887 4578899999999999888889999999985
No 87
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.62 E-value=4.8e-14 Score=118.89 Aligned_cols=103 Identities=13% Similarity=0.039 Sum_probs=83.3
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCC-CCCccHHHHHHHHHHHHHHhCCCCeEEEE
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDP-DPKRTRKSLALDIEELADQLGLGSKFYVV 134 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~-~~~~~~~~~~~di~~~l~~l~~~~~~~lv 134 (343)
|+||++..+.+....+ -++++ +.|.+ |+.|+..||..-+..+. ....+++|+++-+.++++++|. + ++++
T Consensus 103 ~pvLiV~Pl~g~~~~L----~RS~V-~~Ll~--g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~-~-v~l~ 173 (406)
T TIGR01849 103 PAVLIVAPMSGHYATL----LRSTV-EALLP--DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGP-D-IHVI 173 (406)
T ss_pred CcEEEEcCCchHHHHH----HHHHH-HHHhC--CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCC-C-CcEE
Confidence 7999999988665552 35666 77776 89999999987776642 2346999999999999999986 4 9999
Q ss_pred EecccHHHHHHHHHHh-----hcccceeEEEccccccc
Q 019314 135 GFSMGGQVVWSCLKYI-----SHRLTGAALIAPVINYW 167 (343)
Q Consensus 135 G~S~Gg~~a~~~a~~~-----p~~v~~lil~~~~~~~~ 167 (343)
|+|+||..++.+++.+ |+++++++++++.+++.
T Consensus 174 GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 174 AVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred EEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCC
Confidence 9999999988777765 66799999999987754
No 88
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.62 E-value=7.8e-15 Score=116.27 Aligned_cols=106 Identities=20% Similarity=0.246 Sum_probs=63.7
Q ss_pred CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCC------ccc---C-------CCCC---CccHH
Q 019314 52 YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPG------YGE---S-------DPDP---KRTRK 112 (343)
Q Consensus 52 ~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G------~G~---S-------~~~~---~~~~~ 112 (343)
++..+.||++||+|.+... |..+. .......+.+++.++-|- .|. + +... ...+.
T Consensus 11 ~~~~~lvi~LHG~G~~~~~-----~~~~~-~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDL-----FALLA-ELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp ST-SEEEEEE--TTS-HHH-----HHHHH-HHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred CCCceEEEEECCCCCCcch-----hHHHH-hhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 4568899999999999976 55543 311111246777776542 122 1 0011 11344
Q ss_pred HHHHHHHHHHHHh---CC-CCeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 113 SLALDIEELADQL---GL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 113 ~~~~di~~~l~~l---~~-~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
+.++.+.++++.. ++ .+++++.|+|.||.+|+.++.++|+.+.++|.+++.
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~ 139 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGY 139 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES--
T ss_pred HHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecc
Confidence 4455556666543 22 168999999999999999999999999999999985
No 89
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.62 E-value=2.4e-15 Score=122.82 Aligned_cols=118 Identities=14% Similarity=0.093 Sum_probs=85.0
Q ss_pred ccEEEEEeccCCCCCCeEEEecCCCCCc-ccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-CccHHHHHHHH
Q 019314 41 HQYLKFLNSIEYPTSLLHLNFHLFNGCV-GSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLALDI 118 (343)
Q Consensus 41 ~~~l~y~~~g~~~~~~~vv~ihG~~~~~-~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~di 118 (343)
+..+.+....+ .+|++|+|||+.++. .. |...+-..+....+|+|+++|+++++.+..+. ..+...+++++
T Consensus 24 ~~~~~~~~f~~--~~p~vilIHG~~~~~~~~-----~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~l 96 (275)
T cd00707 24 PSSLKNSNFNP--SRPTRFIIHGWTSSGEES-----WISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAEL 96 (275)
T ss_pred hhhhhhcCCCC--CCCcEEEEcCCCCCCCCc-----HHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHH
Confidence 34455544543 588999999999887 55 54332144555447999999999984332111 12455566666
Q ss_pred HHHHHHh------CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccc
Q 019314 119 EELADQL------GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY 166 (343)
Q Consensus 119 ~~~l~~l------~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 166 (343)
.++++.+ +. +++++||||+||++|..++.++|++|.++++++|+.+.
T Consensus 97 a~~l~~L~~~~g~~~-~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 97 AKFLDFLVDNTGLSL-ENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHhcCCCh-HHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 6666654 34 68999999999999999999999999999999997543
No 90
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.61 E-value=6.3e-15 Score=110.76 Aligned_cols=156 Identities=17% Similarity=0.209 Sum_probs=100.9
Q ss_pred EEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEec
Q 019314 58 HLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFS 137 (343)
Q Consensus 58 vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S 137 (343)
|+++||++++... + |.+.. +.-.... ++|-.+++ ...+.+++.+.+.+.+...+ +++++||||
T Consensus 1 v~IvhG~~~s~~~-H---W~~wl-~~~l~~~-~~V~~~~~---------~~P~~~~W~~~l~~~i~~~~--~~~ilVaHS 63 (171)
T PF06821_consen 1 VLIVHGYGGSPPD-H---WQPWL-ERQLENS-VRVEQPDW---------DNPDLDEWVQALDQAIDAID--EPTILVAHS 63 (171)
T ss_dssp EEEE--TTSSTTT-S---THHHH-HHHHTTS-EEEEEC-----------TS--HHHHHHHHHHCCHC-T--TTEEEEEET
T ss_pred CEEeCCCCCCCcc-H---HHHHH-HHhCCCC-eEEecccc---------CCCCHHHHHHHHHHHHhhcC--CCeEEEEeC
Confidence 6899999988765 2 54442 4444432 67777776 23478889888888888664 579999999
Q ss_pred ccHHHHHHHH-HHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcchhc
Q 019314 138 MGGQVVWSCL-KYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVV 216 (343)
Q Consensus 138 ~Gg~~a~~~a-~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (343)
+|+..+++++ .....+|.+++|++|.-. .... ..
T Consensus 64 LGc~~~l~~l~~~~~~~v~g~lLVAp~~~-------~~~~-------------------------------~~------- 98 (171)
T PF06821_consen 64 LGCLTALRWLAEQSQKKVAGALLVAPFDP-------DDPE-------------------------------PF------- 98 (171)
T ss_dssp HHHHHHHHHHHHTCCSSEEEEEEES--SC-------GCHH-------------------------------CC-------
T ss_pred HHHHHHHHHHhhcccccccEEEEEcCCCc-------cccc-------------------------------ch-------
Confidence 9999999999 667789999999999521 0000 00
Q ss_pred ccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChh
Q 019314 217 ARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVI 296 (343)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~ 296 (343)
...+ .... .+ +...+..|.++|.+++|+.+|.+
T Consensus 99 ---~~~~-----~~f~-------------------------------------~~--p~~~l~~~~~viaS~nDp~vp~~ 131 (171)
T PF06821_consen 99 ---PPEL-----DGFT-------------------------------------PL--PRDPLPFPSIVIASDNDPYVPFE 131 (171)
T ss_dssp ---TCGG-----CCCT-------------------------------------TS--HCCHHHCCEEEEEETTBSSS-HH
T ss_pred ---hhhc-----cccc-------------------------------------cC--cccccCCCeEEEEcCCCCccCHH
Confidence 0000 0000 00 01122233799999999999999
Q ss_pred HHHHHhhcCCCceEEEcCCCCCccccC
Q 019314 297 LQRYISKKLPWIRYHEIPGSGHLIADA 323 (343)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~gH~~~~e 323 (343)
.++.+++.+ +++++.++++||+...+
T Consensus 132 ~a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 132 RAQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HHHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred HHHHHHHHc-CCCeEECCCCCCccccc
Confidence 999999999 79999999999998764
No 91
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.60 E-value=8.6e-14 Score=125.46 Aligned_cols=122 Identities=16% Similarity=0.026 Sum_probs=91.8
Q ss_pred ecCccEEEEEeccC--CCCCCeEEEecCCCCCcc---cchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHH
Q 019314 38 QTSHQYLKFLNSIE--YPTSLLHLNFHLFNGCVG---SLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRK 112 (343)
Q Consensus 38 ~~~~~~l~y~~~g~--~~~~~~vv~ihG~~~~~~---~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 112 (343)
..||.+|++..+-+ ....|+||++||++.+.. .+ ..... ..++++ ||.|+++|+||+|.|+......-.
T Consensus 3 ~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~----~~~~~-~~l~~~-Gy~vv~~D~RG~g~S~g~~~~~~~ 76 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGL----DKTEP-AWFVAQ-GYAVVIQDTRGRGASEGEFDLLGS 76 (550)
T ss_pred CCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhcccc----ccccH-HHHHhC-CcEEEEEeccccccCCCceEecCc
Confidence 46888998765543 234689999999997653 20 11222 455555 999999999999999864332115
Q ss_pred HHHHHHHHHHHHhCC----CCeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 113 SLALDIEELADQLGL----GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 113 ~~~~di~~~l~~l~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
..++|+.++++.+.. +.++.++|||+||.+++.+|..+|++++++|..++..+
T Consensus 77 ~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 77 DEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred ccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 678888888887732 24899999999999999999999999999999888654
No 92
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.58 E-value=2.8e-13 Score=112.32 Aligned_cols=211 Identities=19% Similarity=0.199 Sum_probs=110.3
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCC---------CC------------ccHH
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPD---------PK------------RTRK 112 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~---------~~------------~~~~ 112 (343)
.-|.||.+||.++.... |...+ .++.. ||.|+.+|.||+|..... .. +-+.
T Consensus 82 ~~Pavv~~hGyg~~~~~-----~~~~~--~~a~~-G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr 153 (320)
T PF05448_consen 82 KLPAVVQFHGYGGRSGD-----PFDLL--PWAAA-GYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYR 153 (320)
T ss_dssp SEEEEEEE--TT--GGG-----HHHHH--HHHHT-T-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHH
T ss_pred CcCEEEEecCCCCCCCC-----ccccc--ccccC-CeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHH
Confidence 45889999999998777 54442 34444 999999999999932210 00 1123
Q ss_pred HHHHHHHHHHHHhC----C-CCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccc
Q 019314 113 SLALDIEELADQLG----L-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQD 187 (343)
Q Consensus 113 ~~~~di~~~l~~l~----~-~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
.+..|....++.+. + .+++.+.|.|.||.+++.+|+..| +|++++...|...- .. ..+......
T Consensus 154 ~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d--------~~-~~~~~~~~~- 222 (320)
T PF05448_consen 154 RVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD--------FR-RALELRADE- 222 (320)
T ss_dssp HHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS--------HH-HHHHHT--S-
T ss_pred HHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc--------hh-hhhhcCCcc-
Confidence 34566666666551 1 168999999999999999999876 69999999885321 00 000000000
Q ss_pred hHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCC
Q 019314 188 QWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFD 267 (343)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
.....+..+... .....+...+.+ ....+. |
T Consensus 223 -------~~y~~~~~~~~~-------------~d~~~~~~~~v~-------------~~L~Y~----------------D 253 (320)
T PF05448_consen 223 -------GPYPEIRRYFRW-------------RDPHHEREPEVF-------------ETLSYF----------------D 253 (320)
T ss_dssp -------TTTHHHHHHHHH-------------HSCTHCHHHHHH-------------HHHHTT-----------------
T ss_pred -------ccHHHHHHHHhc-------------cCCCcccHHHHH-------------HHHhhh----------------h
Confidence 000000000000 000000000000 000111 1
Q ss_pred CCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCC-CceEEEcCCCCCccccCcchHHHHHHHHHcc
Q 019314 268 PMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP-WIRYHEIPGSGHLIADADGMTEAIIKALLLG 337 (343)
Q Consensus 268 ~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~ep~~~~~~i~~fl~~ 337 (343)
..++ .++|+||+++-.|-.|++||+..+....+.++ ..++.++|..||.... +.-.+....||.+
T Consensus 254 ~~nf---A~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~--~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 254 AVNF---ARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGP--EFQEDKQLNFLKE 319 (320)
T ss_dssp HHHH---GGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTH--HHHHHHHHHHHHH
T ss_pred HHHH---HHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchh--hHHHHHHHHHHhc
Confidence 1112 66889999999999999999999999999997 4689999999996543 2225555666643
No 93
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.57 E-value=1.9e-13 Score=109.75 Aligned_cols=100 Identities=20% Similarity=0.303 Sum_probs=82.8
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEE
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVG 135 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG 135 (343)
++|+++|+.+++... |.+++ +.+..+ .+.|+.++.+|.+ .+.+...+++++++...+.|.......++.|+|
T Consensus 1 ~~lf~~p~~gG~~~~-----y~~la-~~l~~~-~~~v~~i~~~~~~-~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G 72 (229)
T PF00975_consen 1 RPLFCFPPAGGSASS-----YRPLA-RALPDD-VIGVYGIEYPGRG-DDEPPPDSIEELASRYAEAIRARQPEGPYVLAG 72 (229)
T ss_dssp -EEEEESSTTCSGGG-----GHHHH-HHHTTT-EEEEEEECSTTSC-TTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEE
T ss_pred CeEEEEcCCccCHHH-----HHHHH-HhCCCC-eEEEEEEecCCCC-CCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehc
Confidence 479999999999999 88887 777764 4789999999998 333344699999999998888876634999999
Q ss_pred ecccHHHHHHHHHHhhc---ccceeEEEccc
Q 019314 136 FSMGGQVVWSCLKYISH---RLTGAALIAPV 163 (343)
Q Consensus 136 ~S~Gg~~a~~~a~~~p~---~v~~lil~~~~ 163 (343)
||+||.+|.++|.+-.+ .+..++++++.
T Consensus 73 ~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 73 WSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp ETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred cCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 99999999999986533 58899999975
No 94
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.54 E-value=2.3e-14 Score=92.54 Aligned_cols=76 Identities=16% Similarity=0.220 Sum_probs=66.3
Q ss_pred ccEEEEEeccCCCC-CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCc--cHHHHHHH
Q 019314 41 HQYLKFLNSIEYPT-SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKR--TRKSLALD 117 (343)
Q Consensus 41 ~~~l~y~~~g~~~~-~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~d 117 (343)
|.+|+|+.+.+... +.+|+++||++.++.. |..++ +.|++. ||.|+++|+||||+|++...+ +++++++|
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~r-----y~~~a-~~L~~~-G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D 73 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGR-----YAHLA-EFLAEQ-GYAVFAYDHRGHGRSEGKRGHIDSFDDYVDD 73 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHH-----HHHHH-HHHHhC-CCEEEEECCCcCCCCCCcccccCCHHHHHHH
Confidence 56889999987554 8899999999999999 99998 888876 999999999999999975553 89999999
Q ss_pred HHHHHH
Q 019314 118 IEELAD 123 (343)
Q Consensus 118 i~~~l~ 123 (343)
+..+++
T Consensus 74 ~~~~~~ 79 (79)
T PF12146_consen 74 LHQFIQ 79 (79)
T ss_pred HHHHhC
Confidence 998874
No 95
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.51 E-value=8.2e-13 Score=102.02 Aligned_cols=224 Identities=17% Similarity=0.098 Sum_probs=136.4
Q ss_pred eeeecCccEEEEEeccC--C-CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCC----CC
Q 019314 35 LLQQTSHQYLKFLNSIE--Y-PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDP----DP 107 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~--~-~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~----~~ 107 (343)
+++..+|.+++-+..-+ . ..-|.||-.||+++.... |.+.. .+... ||.|+.+|-||.|.|.. ++
T Consensus 60 Tf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~-----~~~~l--~wa~~-Gyavf~MdvRGQg~~~~dt~~~p 131 (321)
T COG3458 60 TFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGE-----WHDML--HWAVA-GYAVFVMDVRGQGSSSQDTADPP 131 (321)
T ss_pred EEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCC-----ccccc--ccccc-ceeEEEEecccCCCccccCCCCC
Confidence 34445566655332222 1 235899999999999988 76653 45544 99999999999998832 10
Q ss_pred -C-----------------ccHHHHHHHHHHHHHHh------CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 108 -K-----------------RTRKSLALDIEELADQL------GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 108 -~-----------------~~~~~~~~di~~~l~~l------~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
. +-+.....|+..+++.+ +. +++.+.|.|.||.+++.+++..| ++++++.+-|.
T Consensus 132 ~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde-~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pf 209 (321)
T COG3458 132 GGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDE-ERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPF 209 (321)
T ss_pred CCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccch-hheEEeccccCchhhhhhhhcCh-hhhcccccccc
Confidence 0 11223445555555544 44 69999999999999999999876 79999988886
Q ss_pred ccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHH--H
Q 019314 164 INYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQIN--R 241 (343)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 241 (343)
..- ++. +.. .........+..+...... .
T Consensus 210 l~d----f~r-----------------------------------~i~----------~~~~~~ydei~~y~k~h~~~e~ 240 (321)
T COG3458 210 LSD----FPR-----------------------------------AIE----------LATEGPYDEIQTYFKRHDPKEA 240 (321)
T ss_pred ccc----chh-----------------------------------hee----------ecccCcHHHHHHHHHhcCchHH
Confidence 321 010 000 0000000111111110000 0
Q ss_pred HHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCc-eEEEcCCCCCcc
Q 019314 242 AQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWI-RYHEIPGSGHLI 320 (343)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~ 320 (343)
.......+ + ++..-.++|++|+|+..|-.|++||+..+-.+.+.++.. ++.+++--+|.-
T Consensus 241 ~v~~TL~y----------------f---D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~ 301 (321)
T COG3458 241 EVFETLSY----------------F---DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEG 301 (321)
T ss_pred HHHHHHhh----------------h---hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeecccccc
Confidence 00000000 0 222226789999999999999999999999999999754 577777666643
Q ss_pred ccCcchHHHHHHHHHccc
Q 019314 321 ADADGMTEAIIKALLLGE 338 (343)
Q Consensus 321 ~~ep~~~~~~i~~fl~~~ 338 (343)
. |....+.+..|++..
T Consensus 302 ~--p~~~~~~~~~~l~~l 317 (321)
T COG3458 302 G--PGFQSRQQVHFLKIL 317 (321)
T ss_pred C--cchhHHHHHHHHHhh
Confidence 3 555556566676654
No 96
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.51 E-value=3.5e-13 Score=110.99 Aligned_cols=110 Identities=12% Similarity=0.214 Sum_probs=84.3
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHH-----HHHHHHHHHhCCC
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLA-----LDIEELADQLGLG 128 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~-----~di~~~l~~l~~~ 128 (343)
.+++++++|.+-.....+|...=.+++ .-+.+. |..|+.+++++-..+.. ..++++++ +.+..+.+..+.
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V-~~l~~~-g~~vfvIsw~nPd~~~~--~~~~edYi~e~l~~aid~v~~itg~- 180 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLV-RWLLEQ-GLDVFVISWRNPDASLA--AKNLEDYILEGLSEAIDTVKDITGQ- 180 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHH-HHHHHc-CCceEEEeccCchHhhh--hccHHHHHHHHHHHHHHHHHHHhCc-
Confidence 468999999999888875555434555 555555 99999999998766654 33555555 445555555677
Q ss_pred CeEEEEEecccHHHHHHHHHHhhcc-cceeEEEcccccccC
Q 019314 129 SKFYVVGFSMGGQVVWSCLKYISHR-LTGAALIAPVINYWW 168 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~~~p~~-v~~lil~~~~~~~~~ 168 (343)
+++.++|+|.||+++..+++.++.+ |++++++.+..++..
T Consensus 181 ~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~ 221 (445)
T COG3243 181 KDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSH 221 (445)
T ss_pred cccceeeEecchHHHHHHHHhhhhcccccceeeecchhhcc
Confidence 7999999999999999999999988 999999988877643
No 97
>COG0400 Predicted esterase [General function prediction only]
Probab=99.51 E-value=3e-13 Score=103.99 Aligned_cols=108 Identities=24% Similarity=0.308 Sum_probs=69.2
Q ss_pred ccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCC--cccCC-----CCCCcc-------HHHH
Q 019314 49 SIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPG--YGESD-----PDPKRT-------RKSL 114 (343)
Q Consensus 49 ~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G--~G~S~-----~~~~~~-------~~~~ 114 (343)
.+..+..|+||++||+|++... +.+.. ..+.. ++.++.+.-+- .|.-. ....++ ...+
T Consensus 12 ~~~~p~~~~iilLHG~Ggde~~-----~~~~~-~~~~P--~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~ 83 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDELD-----LVPLP-ELILP--NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKL 83 (207)
T ss_pred CCCCCCCcEEEEEecCCCChhh-----hhhhh-hhcCC--CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHH
Confidence 3445567889999999988888 65543 33333 34555442211 01000 000112 2333
Q ss_pred HHHHHHHHHHhCCC-CeEEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 115 ALDIEELADQLGLG-SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 115 ~~di~~~l~~l~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
++-+....+..+++ ++++++|+|.||++++.+..++|+.++++|+.+|..
T Consensus 84 ~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~ 134 (207)
T COG0400 84 AEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGML 134 (207)
T ss_pred HHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcC
Confidence 44444444555542 699999999999999999999999999999999963
No 98
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.51 E-value=2.3e-12 Score=102.47 Aligned_cols=156 Identities=20% Similarity=0.225 Sum_probs=118.9
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc-ccCCCCC------------CccHHHHHHHHHHHH
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY-GESDPDP------------KRTRKSLALDIEELA 122 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S~~~~------------~~~~~~~~~di~~~l 122 (343)
|.||++|+..+-... .+.++ ++|+.+ ||.|++||+-+. |.+.... ..+..+...|+.+.+
T Consensus 28 P~VIv~hei~Gl~~~-----i~~~a-~rlA~~-Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~ 100 (236)
T COG0412 28 PGVIVLHEIFGLNPH-----IRDVA-RRLAKA-GYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAAL 100 (236)
T ss_pred CEEEEEecccCCchH-----HHHHH-HHHHhC-CcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHH
Confidence 899999999988888 88998 899887 999999999873 3332211 012367788888888
Q ss_pred HHhC-----CCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhc
Q 019314 123 DQLG-----LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYA 197 (343)
Q Consensus 123 ~~l~-----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (343)
+.|. ..+++.++|+||||.+++.++.+.| .+++.+..-+....
T Consensus 101 ~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~------------------------------- 148 (236)
T COG0412 101 DYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA------------------------------- 148 (236)
T ss_pred HHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC-------------------------------
Confidence 8873 1257999999999999999999877 68888887764110
Q ss_pred hHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCC
Q 019314 198 PWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPN 277 (343)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (343)
.-....++
T Consensus 149 ------------------------------------------------------------------------~~~~~~~~ 156 (236)
T COG0412 149 ------------------------------------------------------------------------DDTADAPK 156 (236)
T ss_pred ------------------------------------------------------------------------Cccccccc
Confidence 00001457
Q ss_pred CCCcEEEEecCCCCCCChhHHHHHhhcCC----CceEEEcCCCCCcccc
Q 019314 278 SEGSVHLWQGDEDRLVPVILQRYISKKLP----WIRYHEIPGSGHLIAD 322 (343)
Q Consensus 278 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~ 322 (343)
+++|+|+..|+.|..+|......+.+.+. +.++.+++++.|.++.
T Consensus 157 ~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~ 205 (236)
T COG0412 157 IKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFAN 205 (236)
T ss_pred ccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCcccccc
Confidence 78889999999999999887766666553 4678999999898773
No 99
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.50 E-value=4e-12 Score=103.27 Aligned_cols=105 Identities=17% Similarity=0.199 Sum_probs=88.3
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHc--CcEEEEecCCCcccCCCC-------CCccHHHHHHHHHHHHHHh
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDEL--GIYIVSFDRPGYGESDPD-------PKRTRKSLALDIEELADQL 125 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~--g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~di~~~l~~l 125 (343)
+..+|+|+|.+|-.+. |.+++ ..|.+.. .+.|+++.+.||-.++.. ..++++++++-..++++.+
T Consensus 2 ~~li~~IPGNPGlv~f-----Y~~Fl-~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~ 75 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-----YEEFL-SALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKEL 75 (266)
T ss_pred cEEEEEECCCCChHHH-----HHHHH-HHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHH
Confidence 4679999999999988 87876 8887663 699999999999877654 2469999999888887765
Q ss_pred C-----CCCeEEEEEecccHHHHHHHHHHhh---cccceeEEEccccc
Q 019314 126 G-----LGSKFYVVGFSMGGQVVWSCLKYIS---HRLTGAALIAPVIN 165 (343)
Q Consensus 126 ~-----~~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lil~~~~~~ 165 (343)
- .+.+++++|||.|+.++++++.+.+ .+|.+++++-|.+.
T Consensus 76 ~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 76 IPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred hhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 2 3468999999999999999999999 68999999999864
No 100
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.49 E-value=4.2e-12 Score=96.47 Aligned_cols=89 Identities=24% Similarity=0.316 Sum_probs=67.1
Q ss_pred EEEecCCCCCcccchhhhhhhhhhHHHHhHcC--cEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEE
Q 019314 58 HLNFHLFNGCVGSLNFTVLACLSFQEVVDELG--IYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVG 135 (343)
Q Consensus 58 vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g--~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG 135 (343)
|+++||+.+++.+ .+........++.+ ..+.++|++ ...++..+.+.++++.... +.+.|||
T Consensus 2 ilYlHGF~Ssp~S-----~Ka~~l~~~~~~~~~~~~~~~p~l~----------~~p~~a~~~l~~~i~~~~~-~~~~liG 65 (187)
T PF05728_consen 2 ILYLHGFNSSPQS-----FKAQALKQYFAEHGPDIQYPCPDLP----------PFPEEAIAQLEQLIEELKP-ENVVLIG 65 (187)
T ss_pred eEEecCCCCCCCC-----HHHHHHHHHHHHhCCCceEECCCCC----------cCHHHHHHHHHHHHHhCCC-CCeEEEE
Confidence 7999999999988 44422234333323 456777765 3567778888899998876 5799999
Q ss_pred ecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 136 FSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 136 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
.|+||..|..+|.+++ +++ |+++|+..
T Consensus 66 SSlGG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 66 SSLGGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred EChHHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 9999999999999986 444 99999754
No 101
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.47 E-value=4.2e-13 Score=121.59 Aligned_cols=109 Identities=21% Similarity=0.275 Sum_probs=86.5
Q ss_pred eeeeecCccEEEEEeccCC--------CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCC
Q 019314 34 LLLQQTSHQYLKFLNSIEY--------PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDP 105 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g~~--------~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~ 105 (343)
..+...++.++.|...|.+ .+.|+||++||++++... |..++ ..|.++ ||+|+++|+||||+|..
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~-----~~~lA-~~La~~-Gy~VIaiDlpGHG~S~~ 492 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKEN-----ALAFA-GTLAAA-GVATIAIDHPLHGARSF 492 (792)
T ss_pred eEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHH-----HHHHH-HHHHhC-CcEEEEeCCCCCCcccc
Confidence 3566778888887775542 123589999999999999 98887 888765 89999999999999943
Q ss_pred C----------C--------------CccHHHHHHHHHHHHHHhC--------------C-CCeEEEEEecccHHHHHHH
Q 019314 106 D----------P--------------KRTRKSLALDIEELADQLG--------------L-GSKFYVVGFSMGGQVVWSC 146 (343)
Q Consensus 106 ~----------~--------------~~~~~~~~~di~~~l~~l~--------------~-~~~~~lvG~S~Gg~~a~~~ 146 (343)
. . +.++++.+.|+..++..++ . ..+++++||||||.++..+
T Consensus 493 ~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~ 572 (792)
T TIGR03502 493 DANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSF 572 (792)
T ss_pred ccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHH
Confidence 2 0 1267888999998888776 1 1589999999999999999
Q ss_pred HHH
Q 019314 147 LKY 149 (343)
Q Consensus 147 a~~ 149 (343)
+..
T Consensus 573 ~~~ 575 (792)
T TIGR03502 573 IAY 575 (792)
T ss_pred HHh
Confidence 975
No 102
>PRK10115 protease 2; Provisional
Probab=99.46 E-value=3.8e-12 Score=116.77 Aligned_cols=126 Identities=16% Similarity=0.093 Sum_probs=90.8
Q ss_pred eeeeecCccEEEE-EeccC----CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCC---
Q 019314 34 LLLQQTSHQYLKF-LNSIE----YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDP--- 105 (343)
Q Consensus 34 ~~~~~~~~~~l~y-~~~g~----~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~--- 105 (343)
..++..||.++.+ ..+.+ +...|.||++||..+...... |.... ..|+++ ||.|+.++.||-|+-..
T Consensus 419 v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~---f~~~~-~~l~~r-G~~v~~~n~RGs~g~G~~w~ 493 (686)
T PRK10115 419 LWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDAD---FSFSR-LSLLDR-GFVYAIVHVRGGGELGQQWY 493 (686)
T ss_pred EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCC---ccHHH-HHHHHC-CcEEEEEEcCCCCccCHHHH
Confidence 3566789998875 33211 234699999999887775422 44443 667765 99999999999664421
Q ss_pred ------CCCccHHHHHHHHHHHHHHh--CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 106 ------DPKRTRKSLALDIEELADQL--GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 106 ------~~~~~~~~~~~di~~~l~~l--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
....+++|+++-+..+++.= +. +++.+.|.|.||.++..++.++|++++++|...|..+
T Consensus 494 ~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~-~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 494 EDGKFLKKKNTFNDYLDACDALLKLGYGSP-SLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcCCCCh-HHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 11236666666666665541 23 6999999999999999999999999999999998754
No 103
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.46 E-value=1.4e-12 Score=104.62 Aligned_cols=102 Identities=24% Similarity=0.292 Sum_probs=63.2
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCC----CcccCCCCCCccHHHHHHHHHHHHHHh----
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRP----GYGESDPDPKRTRKSLALDIEELADQL---- 125 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~di~~~l~~l---- 125 (343)
....||||.|++..-....+ ...++ +.|.. .+|.|+-+.++ |+|.+ +++.-++||.++++++
T Consensus 32 ~~~~llfIGGLtDGl~tvpY--~~~La-~aL~~-~~wsl~q~~LsSSy~G~G~~------SL~~D~~eI~~~v~ylr~~~ 101 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPY--LPDLA-EALEE-TGWSLFQVQLSSSYSGWGTS------SLDRDVEEIAQLVEYLRSEK 101 (303)
T ss_dssp SSSEEEEE--TT--TT-STC--HHHHH-HHHT--TT-EEEEE--GGGBTTS-S--------HHHHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCCCCCCCCch--HHHHH-HHhcc-CCeEEEEEEecCccCCcCcc------hhhhHHHHHHHHHHHHHHhh
Confidence 45689999999876554222 34555 55533 38999999876 34433 6777788888877765
Q ss_pred ----CCCCeEEEEEecccHHHHHHHHHHhh-----cccceeEEEcccccc
Q 019314 126 ----GLGSKFYVVGFSMGGQVVWSCLKYIS-----HRLTGAALIAPVINY 166 (343)
Q Consensus 126 ----~~~~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~lil~~~~~~~ 166 (343)
+. ++|+|+|||.|+.-+++|+.... ..|+++||-+|..+.
T Consensus 102 ~g~~~~-~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 102 GGHFGR-EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp -------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred ccccCC-ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 23 69999999999999999998753 469999999998654
No 104
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.46 E-value=7.1e-13 Score=99.89 Aligned_cols=120 Identities=18% Similarity=0.116 Sum_probs=79.3
Q ss_pred eeeecCccEEEEEeccCCCCCC-eEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC----Cc
Q 019314 35 LLQQTSHQYLKFLNSIEYPTSL-LHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP----KR 109 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~~~~-~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~----~~ 109 (343)
.+...||..+.-..+..+.+.+ .|++-.+.+..... +++++ .++.+.||+|..+|+||.|+|++.. ..
T Consensus 9 ~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~f-----YRrfA--~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~ 81 (281)
T COG4757 9 HLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYF-----YRRFA--AAAAKAGFEVLTFDYRGIGQSRPASLSGSQW 81 (281)
T ss_pred ccccCCCccCccccccCCCCCCCcEEecccCCcchhH-----hHHHH--HHhhccCceEEEEecccccCCCccccccCcc
Confidence 4556788877766665433333 45555555555555 77765 4444559999999999999998643 24
Q ss_pred cHHHHHH-HHHHHHHHhC---CCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 110 TRKSLAL-DIEELADQLG---LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 110 ~~~~~~~-di~~~l~~l~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
.+.|++. |+.+.++.++ ...+...||||+||++.-.+.. ++ +..+....+..
T Consensus 82 ~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~g 137 (281)
T COG4757 82 RYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSG 137 (281)
T ss_pred chhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEeccc
Confidence 6666654 6666666553 1368999999999987765554 45 55555555543
No 105
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.42 E-value=9.7e-12 Score=104.87 Aligned_cols=129 Identities=14% Similarity=0.071 Sum_probs=91.7
Q ss_pred eeeeecCccEEEEEeccCC-CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-----
Q 019314 34 LLLQQTSHQYLKFLNSIEY-PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP----- 107 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g~~-~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~----- 107 (343)
..+.+.||.-+........ ..+|+|++.||+.+++..|-...-+.-+ ..+..+.||.|+.-+.||.-.|.+..
T Consensus 51 h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sL-af~LadaGYDVWLgN~RGn~ySr~h~~l~~~ 129 (403)
T KOG2624|consen 51 HEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSL-AFLLADAGYDVWLGNNRGNTYSRKHKKLSPS 129 (403)
T ss_pred EEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccH-HHHHHHcCCceeeecCcCcccchhhcccCCc
Confidence 4677788876665543322 5689999999999999983222101112 45555669999999999977775311
Q ss_pred ------CccHHHHHH-HHHHHHHH----hCCCCeEEEEEecccHHHHHHHHHHhhc---ccceeEEEcccc
Q 019314 108 ------KRTRKSLAL-DIEELADQ----LGLGSKFYVVGFSMGGQVVWSCLKYISH---RLTGAALIAPVI 164 (343)
Q Consensus 108 ------~~~~~~~~~-di~~~l~~----l~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~ 164 (343)
+.++++++. ||-+.|++ -+. ++++.||||.|+.....++...|+ +|+.+++++|+.
T Consensus 130 ~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~-~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 130 SDKEFWDFSWHEMGTYDLPAMIDYILEKTGQ-EKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred CCcceeecchhhhhhcCHHHHHHHHHHhccc-cceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 125666544 55555554 466 799999999999999999888766 799999999986
No 106
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.40 E-value=8.4e-12 Score=98.90 Aligned_cols=98 Identities=19% Similarity=0.160 Sum_probs=63.7
Q ss_pred EEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHh---------CCC
Q 019314 58 HLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL---------GLG 128 (343)
Q Consensus 58 vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l---------~~~ 128 (343)
||++||++.....-.. ...++ ..++++.|+.|+.+|+|=.. ...+.+..+|+.+.++.+ +.
T Consensus 1 v~~~HGGg~~~g~~~~--~~~~~-~~la~~~g~~v~~~~Yrl~p------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~- 70 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES--HWPFA-ARLAAERGFVVVSIDYRLAP------EAPFPAALEDVKAAYRWLLKNADKLGIDP- 70 (211)
T ss_dssp EEEE--STTTSCGTTT--HHHHH-HHHHHHHTSEEEEEE---TT------TSSTTHHHHHHHHHHHHHHHTHHHHTEEE-
T ss_pred CEEECCcccccCChHH--HHHHH-HHHHhhccEEEEEeeccccc------cccccccccccccceeeeccccccccccc-
Confidence 7999998844332111 33444 77777669999999999432 234445555554444432 34
Q ss_pred CeEEEEEecccHHHHHHHHHHhhc----ccceeEEEccccc
Q 019314 129 SKFYVVGFSMGGQVVWSCLKYISH----RLTGAALIAPVIN 165 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~~~p~----~v~~lil~~~~~~ 165 (343)
++++|+|+|.||.+++.++.+..+ .++++++++|..+
T Consensus 71 ~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 71 ERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTD 111 (211)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSS
T ss_pred cceEEeecccccchhhhhhhhhhhhcccchhhhhccccccc
Confidence 699999999999999999987655 3899999999643
No 107
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.39 E-value=1.6e-11 Score=122.82 Aligned_cols=100 Identities=12% Similarity=0.096 Sum_probs=85.7
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVV 134 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lv 134 (343)
+++++++||++++... |..++ ..|.. +++|+++|.+|+|.+ ....++++++++++.+.++.+....+++++
T Consensus 1068 ~~~l~~lh~~~g~~~~-----~~~l~-~~l~~--~~~v~~~~~~g~~~~-~~~~~~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-----FSVLS-RYLDP--QWSIYGIQSPRPDGP-MQTATSLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred CCCeEEecCCCCchHH-----HHHHH-HhcCC--CCcEEEEECCCCCCC-CCCCCCHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 5789999999999999 88887 77755 589999999999866 344579999999999999987653589999
Q ss_pred EecccHHHHHHHHHH---hhcccceeEEEccc
Q 019314 135 GFSMGGQVVWSCLKY---ISHRLTGAALIAPV 163 (343)
Q Consensus 135 G~S~Gg~~a~~~a~~---~p~~v~~lil~~~~ 163 (343)
|||+||.+|.++|.+ .++++..++++++.
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 999999999999986 46789999999874
No 108
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.38 E-value=1.2e-10 Score=88.81 Aligned_cols=224 Identities=14% Similarity=0.127 Sum_probs=115.0
Q ss_pred eeecCccEEEEEeccC----CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc-ccCCCCC-Cc
Q 019314 36 LQQTSHQYLKFLNSIE----YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY-GESDPDP-KR 109 (343)
Q Consensus 36 ~~~~~~~~l~y~~~g~----~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S~~~~-~~ 109 (343)
+...+|.+++..+..| +...++||+.+|++..... +..++ ..|+.. ||+|+.+|-..| |.|++.- .+
T Consensus 7 i~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh-----~agLA-~YL~~N-GFhViRyDsl~HvGlSsG~I~ef 79 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDH-----FAGLA-EYLSAN-GFHVIRYDSLNHVGLSSGDINEF 79 (294)
T ss_dssp EEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGG-----GHHHH-HHHHTT-T--EEEE---B------------
T ss_pred eEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHH-----HHHHH-HHHhhC-CeEEEeccccccccCCCCChhhc
Confidence 4456788898877665 2345899999999999999 99998 888776 999999999876 8888654 46
Q ss_pred cHHHHHHHHHHHHHHh---CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhcccc
Q 019314 110 TRKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQ 186 (343)
Q Consensus 110 ~~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (343)
++....+++..+++.+ +. .++.|+.-|+.|.+|+..|.+ + .+.-+|..-+..++. ....+....
T Consensus 80 tms~g~~sL~~V~dwl~~~g~-~~~GLIAaSLSaRIAy~Va~~-i-~lsfLitaVGVVnlr----------~TLe~al~~ 146 (294)
T PF02273_consen 80 TMSIGKASLLTVIDWLATRGI-RRIGLIAASLSARIAYEVAAD-I-NLSFLITAVGVVNLR----------DTLEKALGY 146 (294)
T ss_dssp -HHHHHHHHHHHHHHHHHTT----EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HH----------HHHHHHHSS
T ss_pred chHHhHHHHHHHHHHHHhcCC-CcchhhhhhhhHHHHHHHhhc-c-CcceEEEEeeeeeHH----------HHHHHHhcc
Confidence 8888899998888877 66 689999999999999999985 4 477788777765420 011110000
Q ss_pred chHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhh-hHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCC
Q 019314 187 DQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLM-PKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWE 265 (343)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
+. .+... ...+....-+....- ..+..+... ..+ ..+..
T Consensus 147 Dy-----------------l~~~i------~~lp~dldfeGh~l~~~vFv~dc~e------~~w-~~l~S---------- 186 (294)
T PF02273_consen 147 DY-----------------LQLPI------EQLPEDLDFEGHNLGAEVFVTDCFE------HGW-DDLDS---------- 186 (294)
T ss_dssp -G-----------------GGS-G------GG--SEEEETTEEEEHHHHHHHHHH------TT--SSHHH----------
T ss_pred ch-----------------hhcch------hhCCCcccccccccchHHHHHHHHH------cCC-ccchh----------
Confidence 00 00000 000111100000000 001111100 000 00000
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCC--CceEEEcCCCCCccccCc
Q 019314 266 FDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP--WIRYHEIPGSGHLIADAD 324 (343)
Q Consensus 266 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~ep 324 (343)
-...+.++++|++.+++++|.++......++...+. .+++..++|++|.+...+
T Consensus 187 -----T~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~enl 242 (294)
T PF02273_consen 187 -----TINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLGENL 242 (294)
T ss_dssp -----HHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TTSSH
T ss_pred -----HHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhhhCh
Confidence 011266778999999999999999998888888653 578999999999876643
No 109
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.37 E-value=3.4e-12 Score=102.90 Aligned_cols=120 Identities=20% Similarity=0.220 Sum_probs=98.7
Q ss_pred eeeecCccEEEEEeccCC-----CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHc--------CcEEEEecCCCcc
Q 019314 35 LLQQTSHQYLKFLNSIEY-----PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDEL--------GIYIVSFDRPGYG 101 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~-----~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~--------g~~vi~~D~~G~G 101 (343)
+-+...|.++||....++ +.--||+++||++++-.. |-.++ +-|-+.. -|.||+|.+||+|
T Consensus 127 ykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~E-----FykfI-PlLT~p~~hg~~~d~~FEVI~PSlPGyg 200 (469)
T KOG2565|consen 127 YKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVRE-----FYKFI-PLLTDPKRHGNESDYAFEVIAPSLPGYG 200 (469)
T ss_pred hhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHH-----HHhhh-hhhcCccccCCccceeEEEeccCCCCcc
Confidence 456688999999766542 223579999999999998 76776 6665431 2799999999999
Q ss_pred cCCCCCC--ccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEc
Q 019314 102 ESDPDPK--RTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIA 161 (343)
Q Consensus 102 ~S~~~~~--~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~ 161 (343)
-|+.+.. .+..+.|..+..++-.||. .++.|-|-.||+.|+..+|..+|++|.++=+-.
T Consensus 201 wSd~~sk~GFn~~a~ArvmrkLMlRLg~-nkffiqGgDwGSiI~snlasLyPenV~GlHlnm 261 (469)
T KOG2565|consen 201 WSDAPSKTGFNAAATARVMRKLMLRLGY-NKFFIQGGDWGSIIGSNLASLYPENVLGLHLNM 261 (469)
T ss_pred cCcCCccCCccHHHHHHHHHHHHHHhCc-ceeEeecCchHHHHHHHHHhhcchhhhHhhhcc
Confidence 9997654 5778889999999999999 699999999999999999999999998875543
No 110
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.35 E-value=7.1e-11 Score=85.76 Aligned_cols=172 Identities=16% Similarity=0.116 Sum_probs=113.9
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEE
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVG 135 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG 135 (343)
+.+|++||+.+|... + |+.. +.++.. .+-.+++. .+....++++++.+.+.+.... ++++||+
T Consensus 3 ~~~lIVpG~~~Sg~~-H---Wq~~----we~~l~-~a~rveq~------~w~~P~~~dWi~~l~~~v~a~~--~~~vlVA 65 (181)
T COG3545 3 TDVLIVPGYGGSGPN-H---WQSR----WESALP-NARRVEQD------DWEAPVLDDWIARLEKEVNAAE--GPVVLVA 65 (181)
T ss_pred ceEEEecCCCCCChh-H---HHHH----HHhhCc-cchhcccC------CCCCCCHHHHHHHHHHHHhccC--CCeEEEE
Confidence 568999999988755 1 4332 222211 12222221 2234588999999999998883 5799999
Q ss_pred ecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcchh
Q 019314 136 FSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAV 215 (343)
Q Consensus 136 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (343)
||+|+..++.++.+....|.|++|++|.-. ..
T Consensus 66 HSLGc~~v~h~~~~~~~~V~GalLVAppd~------~~------------------------------------------ 97 (181)
T COG3545 66 HSLGCATVAHWAEHIQRQVAGALLVAPPDV------SR------------------------------------------ 97 (181)
T ss_pred ecccHHHHHHHHHhhhhccceEEEecCCCc------cc------------------------------------------
Confidence 999999999999987779999999998511 00
Q ss_pred cccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCh
Q 019314 216 VARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPV 295 (343)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~ 295 (343)
+.... .... .+++.. ...+.-|.+++...+|+.+++
T Consensus 98 ----~~~~~----~~~~--------------------------------tf~~~p----~~~lpfps~vvaSrnDp~~~~ 133 (181)
T COG3545 98 ----PEIRP----KHLM--------------------------------TFDPIP----REPLPFPSVVVASRNDPYVSY 133 (181)
T ss_pred ----cccch----hhcc--------------------------------ccCCCc----cccCCCceeEEEecCCCCCCH
Confidence 00000 0000 011101 112234499999999999999
Q ss_pred hHHHHHhhcCCCceEEEcCCCCCccccC----cchHHHHHHHHHcc
Q 019314 296 ILQRYISKKLPWIRYHEIPGSGHLIADA----DGMTEAIIKALLLG 337 (343)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e----p~~~~~~i~~fl~~ 337 (343)
+.++.+++.+. +.++.+..+||+--.. -.+....+.+|+.+
T Consensus 134 ~~a~~~a~~wg-s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 134 EHAEDLANAWG-SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred HHHHHHHHhcc-HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 99999999994 6788888899976552 34456666666654
No 111
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.35 E-value=6.8e-12 Score=103.15 Aligned_cols=125 Identities=14% Similarity=0.054 Sum_probs=81.4
Q ss_pred CccEEEEEeccC----CCCCCeEEEecCCCCCccc-chhhh----hhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCcc
Q 019314 40 SHQYLKFLNSIE----YPTSLLHLNFHLFNGCVGS-LNFTV----LACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRT 110 (343)
Q Consensus 40 ~~~~l~y~~~g~----~~~~~~vv~ihG~~~~~~~-~~~~~----~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~ 110 (343)
||.+|+...+-+ +..-|+||..|+++.+... ..... +.... ..++++ ||.|+..|.||.|.|++.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~-~~~~~~-GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSAR-RPFAER-GYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGG-HHHHHT-T-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhH-HHHHhC-CCEEEEECCcccccCCCccccC
Confidence 567777655533 2345889999999965411 00000 00000 125555 9999999999999999766553
Q ss_pred HHHHHHHHHHHHHHhC---C-CCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccc
Q 019314 111 RKSLALDIEELADQLG---L-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY 166 (343)
Q Consensus 111 ~~~~~~di~~~l~~l~---~-~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 166 (343)
...-++|..++|+.+. . +.+|.++|.|++|..++.+|...|..+++++...+..+.
T Consensus 79 ~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 5566777777777762 1 158999999999999999999888899999999887654
No 112
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.34 E-value=1.8e-10 Score=81.81 Aligned_cols=103 Identities=18% Similarity=0.264 Sum_probs=76.2
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccC-----CCCCC-c-cHHHHHHHHHHHHHHhC
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGES-----DPDPK-R-TRKSLALDIEELADQLG 126 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S-----~~~~~-~-~~~~~~~di~~~l~~l~ 126 (343)
...+||+-||.+.+.++ .....++ ..|..+ |+.|..++++-.-.. .+++. . -..++...+.++...+.
T Consensus 13 ~~~tilLaHGAGasmdS---t~m~~~a-~~la~~-G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~ 87 (213)
T COG3571 13 APVTILLAHGAGASMDS---TSMTAVA-AALARR-GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLA 87 (213)
T ss_pred CCEEEEEecCCCCCCCC---HHHHHHH-HHHHhC-ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhccc
Confidence 45589999999988777 3355665 666655 999999999764322 22222 2 34567777888888887
Q ss_pred CCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcc
Q 019314 127 LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAP 162 (343)
Q Consensus 127 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~ 162 (343)
- .+.++-|+||||.++.+.+..--..|+++++++=
T Consensus 88 ~-gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgY 122 (213)
T COG3571 88 E-GPLIIGGKSMGGRVASMVADELQAPIDGLVCLGY 122 (213)
T ss_pred C-CceeeccccccchHHHHHHHhhcCCcceEEEecC
Confidence 6 5999999999999999998775556999988874
No 113
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.31 E-value=9.8e-11 Score=102.45 Aligned_cols=117 Identities=21% Similarity=0.266 Sum_probs=81.2
Q ss_pred ccEEEEEecc---CCCCCCeEEEecCCCCCcccchhhhhhhhh------h-----------HHHHhHcCcEEEEecCC-C
Q 019314 41 HQYLKFLNSI---EYPTSLLHLNFHLFNGCVGSLNFTVLACLS------F-----------QEVVDELGIYIVSFDRP-G 99 (343)
Q Consensus 41 ~~~l~y~~~g---~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~------~-----------~~l~~~~g~~vi~~D~~-G 99 (343)
+..++|.-.. .+++.|.||+++|+++++.. +..+. + ..+.+ -..++.+|.| |
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-----~G~f~E~GP~~i~~~~~~~~~n~~sW~~--~~~~l~iDqP~G 132 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-----FALLAENGPCLMNETTGDIYNNTYSWNN--EAYVIYVDQPAG 132 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-----HhhhccCCCeEEeCCCCceeECCccccc--ccCeEEEeCCCC
Confidence 5667775443 34567999999999998876 21100 0 01111 1579999975 8
Q ss_pred cccCCCCCC---ccHHHHHHHHHHHHHHh-------CCCCeEEEEEecccHHHHHHHHHHhh----------cccceeEE
Q 019314 100 YGESDPDPK---RTRKSLALDIEELADQL-------GLGSKFYVVGFSMGGQVVWSCLKYIS----------HRLTGAAL 159 (343)
Q Consensus 100 ~G~S~~~~~---~~~~~~~~di~~~l~~l-------~~~~~~~lvG~S~Gg~~a~~~a~~~p----------~~v~~lil 159 (343)
+|.|..... .+.++.++|+.++++.. +. .+++|+|||+||.++..+|.+-- =.++++++
T Consensus 133 ~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~-~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~I 211 (462)
T PTZ00472 133 VGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRA-NDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAV 211 (462)
T ss_pred cCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccC-CCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEE
Confidence 888864322 35678899998888743 34 69999999999999988887531 14789999
Q ss_pred Eccccc
Q 019314 160 IAPVIN 165 (343)
Q Consensus 160 ~~~~~~ 165 (343)
.+|..+
T Consensus 212 GNg~~d 217 (462)
T PTZ00472 212 GNGLTD 217 (462)
T ss_pred eccccC
Confidence 888764
No 114
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.31 E-value=3.6e-10 Score=92.29 Aligned_cols=235 Identities=14% Similarity=0.200 Sum_probs=128.4
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhh--h-hhHHHHhHcCcEEEEecCCCcccCCCCCCc-----cHHHH-------HHH
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLAC--L-SFQEVVDELGIYIVSFDRPGYGESDPDPKR-----TRKSL-------ALD 117 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~--~-~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~-----~~~~~-------~~d 117 (343)
+.+|.+|.++|.|... . |+. + + ..|.++ |+..+.+..|-||.-.+.... ++.|+ +.+
T Consensus 90 ~~rp~~IhLagTGDh~-f-----~rR~~l~a-~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E 161 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHG-F-----WRRRRLMA-RPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILE 161 (348)
T ss_pred CCCceEEEecCCCccc-h-----hhhhhhhh-hHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHH
Confidence 4578888888888754 3 433 2 4 667777 999999999999977653321 22222 222
Q ss_pred HH---HHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHh
Q 019314 118 IE---ELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVA 194 (343)
Q Consensus 118 i~---~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (343)
.. ..++..|. .++.+.|.||||.+|...|..+|..|..+-.+++.... ..+.... +.. ...|.....
T Consensus 162 ~~~Ll~Wl~~~G~-~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs--~vFt~Gv----ls~---~i~W~~L~~ 231 (348)
T PF09752_consen 162 SRALLHWLEREGY-GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSAS--VVFTEGV----LSN---SINWDALEK 231 (348)
T ss_pred HHHHHHHHHhcCC-CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCC--cchhhhh----hhc---CCCHHHHHH
Confidence 33 33344477 69999999999999999999999887777777664321 0000000 000 001111100
Q ss_pred hhchHHHhhhhccCCCCcchh-cccCcc--ccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCC
Q 019314 195 HYAPWLAYWWNTQKLFPPSAV-VARRPE--IFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDL 271 (343)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
.+. ...+..... ...... .......+... ... ...+.. ....+. +..+.
T Consensus 232 q~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~Ea-----------~~~m~~-~md~~T----~l~nf 283 (348)
T PF09752_consen 232 QFE---------DTVYEEEISDIPAQNKSLPLDSMEERRRD---REA-----------LRFMRG-VMDSFT----HLTNF 283 (348)
T ss_pred Hhc---------ccchhhhhcccccCcccccchhhccccch---HHH-----------HHHHHH-HHHhhc----ccccc
Confidence 000 000000000 000000 00000000000 000 000000 000000 00011
Q ss_pred CCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCcccc--CcchHHHHHHHHHc
Q 019314 272 ENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIAD--ADGMTEAIIKALLL 336 (343)
Q Consensus 272 ~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--ep~~~~~~i~~fl~ 336 (343)
+.|.-.-.+.++.+++|..+|......+.+.+|+++++.++| ||.-.+ +.+.+.+.|.+-++
T Consensus 284 --~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 284 --PVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred --CCCCCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 123333448999999999999999899999999999999997 997766 58888888887664
No 115
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.30 E-value=9.5e-11 Score=108.40 Aligned_cols=82 Identities=17% Similarity=0.069 Sum_probs=65.5
Q ss_pred HHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCC-------------------CCeEEEEEecccHHH
Q 019314 82 QEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGL-------------------GSKFYVVGFSMGGQV 142 (343)
Q Consensus 82 ~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~-------------------~~~~~lvG~S~Gg~~ 142 (343)
+.+..+ ||.|+..|.||.|.|++.....-.+-.+|..++|+.+.- +.+|.++|.|+||.+
T Consensus 273 ~~~~~r-GYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 273 DYFLPR-GFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHHHhC-CeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 444544 999999999999999875433335566777777777741 259999999999999
Q ss_pred HHHHHHHhhcccceeEEEcccc
Q 019314 143 VWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 143 a~~~a~~~p~~v~~lil~~~~~ 164 (343)
++.+|...|..++++|.+++..
T Consensus 352 ~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 352 PNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHhhCCCcceEEEeeCCCC
Confidence 9999999888999999988753
No 116
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.25 E-value=1.5e-10 Score=90.21 Aligned_cols=105 Identities=17% Similarity=0.214 Sum_probs=72.9
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhh-hhHHHHhHcCcEEEEecCCCcccCCC------CC----CccHHHHHHHHHHHH
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACL-SFQEVVDELGIYIVSFDRPGYGESDP------DP----KRTRKSLALDIEELA 122 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~-~~~~l~~~~g~~vi~~D~~G~G~S~~------~~----~~~~~~~~~di~~~l 122 (343)
..|.||++||.+.+... +... -|..++++.||-|+.|+......... .. ..+...+++.+.++.
T Consensus 15 ~~PLVv~LHG~~~~a~~-----~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~ 89 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAED-----FAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVA 89 (220)
T ss_pred CCCEEEEeCCCCCCHHH-----HHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHh
Confidence 35899999999998877 3221 13678888899999998643211110 00 012233334444444
Q ss_pred HHhCCC-CeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 123 DQLGLG-SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 123 ~~l~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
...+++ ++|++.|+|.||.++..++..+||.+.++...++.
T Consensus 90 ~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 90 ARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred hhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 454442 69999999999999999999999999999988875
No 117
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.25 E-value=7.9e-11 Score=87.27 Aligned_cols=191 Identities=10% Similarity=-0.001 Sum_probs=116.4
Q ss_pred EEEEEeccCCCCCCeEEEecCCC---CCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC--CccHHHHHHH
Q 019314 43 YLKFLNSIEYPTSLLHLNFHLFN---GCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP--KRTRKSLALD 117 (343)
Q Consensus 43 ~l~y~~~g~~~~~~~vv~ihG~~---~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~d 117 (343)
.-....||+....+..|||||+- ++... --.++ .. +.++||+|..+++ +.+.... ..++.+...-
T Consensus 55 ~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~-----clsiv-~~-a~~~gY~vasvgY---~l~~q~htL~qt~~~~~~g 124 (270)
T KOG4627|consen 55 RQLVDIWGSTNQAKLFIFIHGGYWQEGDRKM-----CLSIV-GP-AVRRGYRVASVGY---NLCPQVHTLEQTMTQFTHG 124 (270)
T ss_pred ceEEEEecCCCCccEEEEEecchhhcCchhc-----ccchh-hh-hhhcCeEEEEecc---CcCcccccHHHHHHHHHHH
Confidence 44566778766788999999864 23222 11222 33 3344999999854 4443221 1244444445
Q ss_pred HHHHHHHhCCCCeEEEEEecccHHHHHHHHHH-hhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhhh
Q 019314 118 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKY-ISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHY 196 (343)
Q Consensus 118 i~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~-~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (343)
+.-+++.....+.+.+-|||.|+++|..+..+ +..+|.++++.++.....
T Consensus 125 v~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~----------------------------- 175 (270)
T KOG4627|consen 125 VNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLR----------------------------- 175 (270)
T ss_pred HHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHH-----------------------------
Confidence 55555555443677788999999999988765 334899999999863210
Q ss_pred chHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCCC
Q 019314 197 APWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFP 276 (343)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (343)
.+.. ......-.++....+... . ++. .+.
T Consensus 176 -----------EL~~---te~g~dlgLt~~~ae~~S----------------------c--------------dl~-~~~ 204 (270)
T KOG4627|consen 176 -----------ELSN---TESGNDLGLTERNAESVS----------------------C--------------DLW-EYT 204 (270)
T ss_pred -----------HHhC---CccccccCcccchhhhcC----------------------c--------------cHH-Hhc
Confidence 0000 000000011111000000 0 111 156
Q ss_pred CCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC
Q 019314 277 NSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA 323 (343)
Q Consensus 277 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 323 (343)
.++.|+|++.|++|.---.+..+.++.....+++..+++.+|+-..+
T Consensus 205 ~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 205 DVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIE 251 (270)
T ss_pred CceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHH
Confidence 77788999999999776678888999998889999999999987763
No 118
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.24 E-value=1.1e-10 Score=91.98 Aligned_cols=166 Identities=17% Similarity=0.134 Sum_probs=89.3
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHc---CcEEEEecCCCcc-----cCC-----------CCC-------
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDEL---GIYIVSFDRPGYG-----ESD-----------PDP------- 107 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~---g~~vi~~D~~G~G-----~S~-----------~~~------- 107 (343)
.++.||++||++.++.. ++... ..|.+.. ++.++.+|-|--- -.. ..+
T Consensus 3 ~k~riLcLHG~~~na~i-----f~~q~-~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 76 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEI-----FRQQT-SALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDP 76 (212)
T ss_dssp ---EEEEE--TT--HHH-----HHHHT-HHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS--
T ss_pred CCceEEEeCCCCcCHHH-----HHHHH-HHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeec
Confidence 36789999999999999 66654 5554432 4777777765211 110 000
Q ss_pred ------CccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhh--------cccceeEEEcccccccCCCCCc
Q 019314 108 ------KRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS--------HRLTGAALIAPVINYWWPGFPA 173 (343)
Q Consensus 108 ------~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p--------~~v~~lil~~~~~~~~~~~~~~ 173 (343)
...+++..+.+.+.++..+. =..|+|+|.||.+|..++.... ..++-+|++++....
T Consensus 77 ~~~~~~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~------- 147 (212)
T PF03959_consen 77 DDDDHEYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP------- 147 (212)
T ss_dssp -S-SGGG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E-------
T ss_pred CCCcccccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC-------
Confidence 01345556666666666542 3469999999999998886532 136778888875210
Q ss_pred cchHHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhh
Q 019314 174 NLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESL 253 (343)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (343)
. .. +.
T Consensus 148 ~---------------------------------------------~~---------~~--------------------- 152 (212)
T PF03959_consen 148 D---------------------------------------------PD---------YQ--------------------- 152 (212)
T ss_dssp E---------------------------------------------E----------GT---------------------
T ss_pred c---------------------------------------------hh---------hh---------------------
Confidence 0 00 00
Q ss_pred HHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcCCC-ceEEEcCCCCCccccCcchH
Q 019314 254 FRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPW-IRYHEIPGSGHLIADADGMT 327 (343)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ep~~~ 327 (343)
... .-++|++|+|.|+|++|.+++++.++.+.+.+.+ .+++..++ ||.++...+.+
T Consensus 153 ----------------~~~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~g-GH~vP~~~~~~ 209 (212)
T PF03959_consen 153 ----------------ELY-DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDG-GHHVPRKKEDV 209 (212)
T ss_dssp ----------------TTT---TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESS-SSS----HHHH
T ss_pred ----------------hhh-ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECC-CCcCcCChhhc
Confidence 000 1456788899999999999999999999999877 78888875 99887754433
No 119
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.23 E-value=7.9e-10 Score=87.28 Aligned_cols=101 Identities=22% Similarity=0.220 Sum_probs=69.5
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCC-CCccHHHHHHHHHHHHH-Hh------C
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPD-PKRTRKSLALDIEELAD-QL------G 126 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~di~~~l~-~l------~ 126 (343)
-|.|||+||+...... |..+. ++++.. ||-|+++|+...+..... ...+..++++-+.+=++ .+ +
T Consensus 17 yPVv~f~~G~~~~~s~-----Ys~ll-~hvASh-GyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D 89 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSW-----YSQLL-EHVASH-GYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPD 89 (259)
T ss_pred cCEEEEeCCcCCCHHH-----HHHHH-HHHHhC-ceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhcccccccc
Confidence 6999999999966666 66775 888876 999999997654331111 00112222221111111 11 3
Q ss_pred CCCeEEEEEecccHHHHHHHHHHh-----hcccceeEEEccc
Q 019314 127 LGSKFYVVGFSMGGQVVWSCLKYI-----SHRLTGAALIAPV 163 (343)
Q Consensus 127 ~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~lil~~~~ 163 (343)
. .++.|.|||.||-+|..++..+ +.+++++++++|.
T Consensus 90 ~-s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 90 F-SKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred c-cceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 4 5899999999999999999987 5589999999996
No 120
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.22 E-value=9.2e-10 Score=87.86 Aligned_cols=104 Identities=23% Similarity=0.355 Sum_probs=68.6
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHH-hHcCc--EE--EEecCCCc----ccCC---CCC---------C-ccH
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVV-DELGI--YI--VSFDRPGY----GESD---PDP---------K-RTR 111 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~-~~~g~--~v--i~~D~~G~----G~S~---~~~---------~-~~~ 111 (343)
...|.|||||++++... +..++ ..+. +. |. .+ +-++.-|. |.=+ ..+ . .++
T Consensus 10 ~~tPTifihG~~gt~~s-----~~~mi-~~~~~~~-~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~ 82 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANS-----FNHMI-NRLENKQ-GVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANY 82 (255)
T ss_dssp S-EEEEEE--TTGGCCC-----CHHHH-HHHHHCS-TS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHH
T ss_pred CCCcEEEECCCCCChhH-----HHHHH-HHHHhhc-CCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCH
Confidence 35689999999999999 88887 8886 33 32 23 33343332 2111 111 1 257
Q ss_pred HHHHHHHHHHHHHh----CCCCeEEEEEecccHHHHHHHHHHhhc-----ccceeEEEccccc
Q 019314 112 KSLALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISH-----RLTGAALIAPVIN 165 (343)
Q Consensus 112 ~~~~~di~~~l~~l----~~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lil~~~~~~ 165 (343)
...++.+..++..| ++ +++.+|||||||..++.++..+.. ++.++|.+++..+
T Consensus 83 ~~qa~wl~~vl~~L~~~Y~~-~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 83 KKQAKWLKKVLKYLKKKYHF-KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHHHHHHHCC---SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHHHHHHHHhcCC-CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 78888888888877 67 799999999999999999988532 5899999998654
No 121
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.21 E-value=1.3e-10 Score=86.54 Aligned_cols=96 Identities=21% Similarity=0.324 Sum_probs=71.9
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHh----CCCCeE
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL----GLGSKF 131 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l----~~~~~~ 131 (343)
..+||+.|=++=... =+.++ +.|.++ |+.|+.+|-+-+=-+. .+.++.+.|+.+++++. +. +++
T Consensus 3 t~~v~~SGDgGw~~~-----d~~~a-~~l~~~-G~~VvGvdsl~Yfw~~----rtP~~~a~Dl~~~i~~y~~~w~~-~~v 70 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDL-----DKQIA-EALAKQ-GVPVVGVDSLRYFWSE----RTPEQTAADLARIIRHYRARWGR-KRV 70 (192)
T ss_pred EEEEEEeCCCCchhh-----hHHHH-HHHHHC-CCeEEEechHHHHhhh----CCHHHHHHHHHHHHHHHHHHhCC-ceE
Confidence 357788876665544 33455 667666 9999999977554443 36677777777777654 66 799
Q ss_pred EEEEecccHHHHHHHHHHhhc----ccceeEEEccc
Q 019314 132 YVVGFSMGGQVVWSCLKYISH----RLTGAALIAPV 163 (343)
Q Consensus 132 ~lvG~S~Gg~~a~~~a~~~p~----~v~~lil~~~~ 163 (343)
+|||+|+|+-+......+.|. +|..++|+++.
T Consensus 71 vLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 71 VLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred EEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 999999999888888777664 79999999986
No 122
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.20 E-value=7.5e-10 Score=93.13 Aligned_cols=107 Identities=22% Similarity=0.207 Sum_probs=71.2
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHH---hCCC-C
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQ---LGLG-S 129 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~---l~~~-~ 129 (343)
..|+||++||++-....... ....+ ..+....|+.|+.+|+|-..+-.- ...++|..+-+..+.+. ++.+ +
T Consensus 78 ~~p~vly~HGGg~~~g~~~~--~~~~~-~~~~~~~g~~vv~vdYrlaPe~~~--p~~~~d~~~a~~~l~~~~~~~g~dp~ 152 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRT--HDALV-ARLAAAAGAVVVSVDYRLAPEHPF--PAALEDAYAAYRWLRANAAELGIDPS 152 (312)
T ss_pred CCcEEEEEeCCeeeecChhh--hHHHH-HHHHHHcCCEEEecCCCCCCCCCC--CchHHHHHHHHHHHHhhhHhhCCCcc
Confidence 47999999998843332110 32443 677777799999999995543311 12444433333344433 3321 6
Q ss_pred eEEEEEecccHHHHHHHHHHhhc----ccceeEEEccccc
Q 019314 130 KFYVVGFSMGGQVVWSCLKYISH----RLTGAALIAPVIN 165 (343)
Q Consensus 130 ~~~lvG~S~Gg~~a~~~a~~~p~----~v~~lil~~~~~~ 165 (343)
++.+.|+|.||.+++.++..-.+ ...+.++++|..+
T Consensus 153 ~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 153 RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 89999999999999999987554 4788999998754
No 123
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.19 E-value=5e-09 Score=86.84 Aligned_cols=109 Identities=19% Similarity=0.213 Sum_probs=76.6
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHH------hC
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQ------LG 126 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~------l~ 126 (343)
...|.||++||+|..-..-....+..+. ..++++.+..|+.+|+|=--+..-+ ..++|-.+.+..+.+. .+
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~-~~~a~~~~~vvvSVdYRLAPEh~~P--a~y~D~~~Al~w~~~~~~~~~~~D 164 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFC-TRLAAELNCVVVSVDYRLAPEHPFP--AAYDDGWAALKWVLKNSWLKLGAD 164 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHH-HHHHHHcCeEEEecCcccCCCCCCC--ccchHHHHHHHHHHHhHHHHhCCC
Confidence 3568999999998443321112255665 7888888999999999955444322 2455555555555553 24
Q ss_pred CCCeEEEEEecccHHHHHHHHHHh------hcccceeEEEccccc
Q 019314 127 LGSKFYVVGFSMGGQVVWSCLKYI------SHRLTGAALIAPVIN 165 (343)
Q Consensus 127 ~~~~~~lvG~S~Gg~~a~~~a~~~------p~~v~~lil~~~~~~ 165 (343)
. +++.|.|-|.||.+|..+|.+. +-++++.|++.|...
T Consensus 165 ~-~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 165 P-SRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred c-ccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 5 6899999999999999998763 247999999999754
No 124
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.18 E-value=2.8e-09 Score=84.84 Aligned_cols=100 Identities=19% Similarity=0.308 Sum_probs=83.6
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEE
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVG 135 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG 135 (343)
|+|+++|+.++...+ |.++. ..+... ..|+..+.||.+.- .....+++++++...+.|.......+++|+|
T Consensus 1 ~pLF~fhp~~G~~~~-----~~~L~-~~l~~~--~~v~~l~a~g~~~~-~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPAGGSVLA-----YAPLA-AALGPL--LPVYGLQAPGYGAG-EQPFASLDDMAAAYVAAIRRVQPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCCCCcHHH-----HHHHH-HHhccC--ceeeccccCccccc-ccccCCHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 589999999999999 98887 667664 78999999999852 2334589999999998888886556999999
Q ss_pred ecccHHHHHHHHHHh---hcccceeEEEcccc
Q 019314 136 FSMGGQVVWSCLKYI---SHRLTGAALIAPVI 164 (343)
Q Consensus 136 ~S~Gg~~a~~~a~~~---p~~v~~lil~~~~~ 164 (343)
||+||.+|..+|.+- .+.|..++++++..
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~ 103 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVP 103 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCC
Confidence 999999999999864 33699999999863
No 125
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.16 E-value=3.8e-10 Score=89.17 Aligned_cols=101 Identities=19% Similarity=0.142 Sum_probs=69.5
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhH-------cCcEEEEecCCCcccCCCCCCccHHHHHH----HHHHHH
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDE-------LGIYIVSFDRPGYGESDPDPKRTRKSLAL----DIEELA 122 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~-------~g~~vi~~D~~G~G~S~~~~~~~~~~~~~----di~~~l 122 (343)
++.+||||||..++... |+.+. ..+.+. ..++++++|+......- ....+.+.++ .+..++
T Consensus 3 ~g~pVlFIhG~~Gs~~q-----~rsl~-~~~~~~~~~~~~~~~~d~ft~df~~~~s~~--~g~~l~~q~~~~~~~i~~i~ 74 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQ-----VRSLA-SELQRKALLNDNSSHFDFFTVDFNEELSAF--HGRTLQRQAEFLAEAIKYIL 74 (225)
T ss_pred CCCEEEEECcCCCCHhH-----HHHHH-HHHhhhhhhccCccceeEEEeccCcccccc--ccccHHHHHHHHHHHHHHHH
Confidence 47899999999999888 87775 555321 14789999987643221 1223334333 344444
Q ss_pred HHh-----CCCCeEEEEEecccHHHHHHHHHHhh---cccceeEEEccc
Q 019314 123 DQL-----GLGSKFYVVGFSMGGQVVWSCLKYIS---HRLTGAALIAPV 163 (343)
Q Consensus 123 ~~l-----~~~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lil~~~~ 163 (343)
+.. +. +++++|||||||.+|-.++...+ +.|+.+|.+++.
T Consensus 75 ~~~~~~~~~~-~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 75 ELYKSNRPPP-RSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred HhhhhccCCC-CceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 444 33 79999999999999988886543 479999999875
No 126
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.12 E-value=1.4e-08 Score=77.91 Aligned_cols=107 Identities=16% Similarity=0.146 Sum_probs=81.8
Q ss_pred CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcC--cEEEEecCCCcccCC---C-------CCCccHHHHHHHHH
Q 019314 52 YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELG--IYIVSFDRPGYGESD---P-------DPKRTRKSLALDIE 119 (343)
Q Consensus 52 ~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g--~~vi~~D~~G~G~S~---~-------~~~~~~~~~~~di~ 119 (343)
..+++.+++|+|.+|.... |.+++ ..|....+ +.++.+-..||-.-+ . .+.++++++++--.
T Consensus 26 ~~~~~li~~IpGNPG~~gF-----Y~~F~-~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKl 99 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGF-----YTEFA-RHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKL 99 (301)
T ss_pred CCCceEEEEecCCCCchhH-----HHHHH-HHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHH
Confidence 4568899999999999988 77776 77766554 568888888876543 1 12358999999888
Q ss_pred HHHHHh-CCCCeEEEEEecccHHHHHHHHHHhhc--ccceeEEEcccc
Q 019314 120 ELADQL-GLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALIAPVI 164 (343)
Q Consensus 120 ~~l~~l-~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~ 164 (343)
++++.. --+.+++++|||-|+.+.+........ .|.+++++-|.+
T Consensus 100 aFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 100 AFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred HHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 888765 334799999999999999999874322 588888888764
No 127
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.08 E-value=1.1e-09 Score=82.75 Aligned_cols=161 Identities=17% Similarity=0.087 Sum_probs=108.4
Q ss_pred ccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc-ccCCCCC---------CccHHHHHHHH
Q 019314 49 SIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY-GESDPDP---------KRTRKSLALDI 118 (343)
Q Consensus 49 ~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S~~~~---------~~~~~~~~~di 118 (343)
.|..+++..||+|--..+-... .-+..+ +.++.. ||.|++||+..= -.|.... ..+.+-.-+++
T Consensus 33 ~gs~~~~~~li~i~DvfG~~~~----n~r~~A-dk~A~~-Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i 106 (242)
T KOG3043|consen 33 VGSTSSKKVLIVIQDVFGFQFP----NTREGA-DKVALN-GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDI 106 (242)
T ss_pred ecCCCCCeEEEEEEeeeccccH----HHHHHH-HHHhcC-CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHH
Confidence 3433334567777654433322 033454 666666 999999998632 1111100 12445556677
Q ss_pred HHHHHHh---CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchHHHHhhccccchHHHHHhh
Q 019314 119 EELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAH 195 (343)
Q Consensus 119 ~~~l~~l---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (343)
..+++.+ +..+++.++|.+|||.++..+....| .+.+.+..-|...
T Consensus 107 ~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~------------------------------ 155 (242)
T KOG3043|consen 107 TAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV------------------------------ 155 (242)
T ss_pred HHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC------------------------------
Confidence 7777666 43379999999999999998888877 6777777766410
Q ss_pred hchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHHHhccCCCCCCCCCCCCCC
Q 019314 196 YAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPF 275 (343)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (343)
+. ..+
T Consensus 156 --------------------------------------------------------------------------d~-~D~ 160 (242)
T KOG3043|consen 156 --------------------------------------------------------------------------DS-ADI 160 (242)
T ss_pred --------------------------------------------------------------------------Ch-hHH
Confidence 00 015
Q ss_pred CCCCCcEEEEecCCCCCCChhHHHHHhhcCCC-----ceEEEcCCCCCccc
Q 019314 276 PNSEGSVHLWQGDEDRLVPVILQRYISKKLPW-----IRYHEIPGSGHLIA 321 (343)
Q Consensus 276 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~ 321 (343)
.++++||+++.|+.|.++|++....+.+.+.+ .++.+++|.+|..+
T Consensus 161 ~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 161 ANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred hcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 66778899999999999999998888777642 36999999999877
No 128
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.08 E-value=2.5e-09 Score=84.12 Aligned_cols=116 Identities=17% Similarity=0.138 Sum_probs=72.7
Q ss_pred cCccEEEEEeccC-----CCCC-CeEEEecCCCCCcccchhhhhhhhhhHHHHhHc----------CcEEEEecCC-Ccc
Q 019314 39 TSHQYLKFLNSIE-----YPTS-LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDEL----------GIYIVSFDRP-GYG 101 (343)
Q Consensus 39 ~~~~~l~y~~~g~-----~~~~-~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~----------g~~vi~~D~~-G~G 101 (343)
..|.++.|+-+-+ ++.- |.|||+||.+..+.. -. ..+.... ++-|++|.+- =+.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~d-----n~----~~l~sg~gaiawa~pedqcfVlAPQy~~if~ 239 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSD-----ND----KVLSSGIGAIAWAGPEDQCFVLAPQYNPIFA 239 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCch-----hh----hhhhcCccceeeecccCceEEEccccccccc
Confidence 4577888877654 2333 889999999987766 11 2233211 2344444421 112
Q ss_pred cCCCCCCccHHHHHHHHH-HHHHHhCCC-CeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 102 ESDPDPKRTRKSLALDIE-ELADQLGLG-SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 102 ~S~~~~~~~~~~~~~di~-~~l~~l~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
.++.....-.....+.+. .+.++.+++ ++++++|.|+||.-++.++.++|+.+++.+++++.
T Consensus 240 d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 240 DSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred ccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 222211222333344444 233344443 69999999999999999999999999999999985
No 129
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.08 E-value=4.3e-09 Score=97.34 Aligned_cols=216 Identities=16% Similarity=0.126 Sum_probs=136.3
Q ss_pred ecCccEEEEEeccC-----CCCCCeEEEecCCCCCccc-----chhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC
Q 019314 38 QTSHQYLKFLNSIE-----YPTSLLHLNFHLFNGCVGS-----LNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP 107 (343)
Q Consensus 38 ~~~~~~l~y~~~g~-----~~~~~~vv~ihG~~~~~~~-----~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~ 107 (343)
..+|....+...-| .+.-|.||.+||++++... .+ |. ..+....|+.|+.+|.||.|.....-
T Consensus 504 ~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~---~~----~~~~s~~g~~v~~vd~RGs~~~G~~~ 576 (755)
T KOG2100|consen 504 EIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVD---WN----EVVVSSRGFAVLQVDGRGSGGYGWDF 576 (755)
T ss_pred EeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEec---HH----HHhhccCCeEEEEEcCCCcCCcchhH
Confidence 34888888876654 2334788889999973332 11 21 22344559999999999987654221
Q ss_pred ---------CccHHHHHHHHHHHHHHhCCC-CeEEEEEecccHHHHHHHHHHhhcc-cceeEEEcccccccCCCCCccch
Q 019314 108 ---------KRTRKSLALDIEELADQLGLG-SKFYVVGFSMGGQVVWSCLKYISHR-LTGAALIAPVINYWWPGFPANLT 176 (343)
Q Consensus 108 ---------~~~~~~~~~di~~~l~~l~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~ 176 (343)
...++|+...+..+++..-+| +++.|.|+|.||.+++..+...|+. ++..+.++|..+.. ......
T Consensus 577 ~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~---~yds~~ 653 (755)
T KOG2100|consen 577 RSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL---YYDSTY 653 (755)
T ss_pred HHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee---eecccc
Confidence 136677777777777665332 7999999999999999999999854 55559999976531 000000
Q ss_pred HHHHhhccccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHH
Q 019314 177 KEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRD 256 (343)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (343)
.. ++. ....+....+.+
T Consensus 654 te-----------------------------rym-----------g~p~~~~~~y~e----------------------- 670 (755)
T KOG2100|consen 654 TE-----------------------------RYM-----------GLPSENDKGYEE----------------------- 670 (755)
T ss_pred cH-----------------------------hhc-----------CCCccccchhhh-----------------------
Confidence 00 000 000000000000
Q ss_pred HHhccCCCCCCCCCCCCCCCCCCCcE-EEEecCCCCCCChhHHHHHhhcCC----CceEEEcCCCCCcccc-C-cchHHH
Q 019314 257 MMIGFGTWEFDPMDLENPFPNSEGSV-HLWQGDEDRLVPVILQRYISKKLP----WIRYHEIPGSGHLIAD-A-DGMTEA 329 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~i~~Pv-l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e-p~~~~~ 329 (343)
.....++..++.|. |++||+.|..++.+.+..+.+.+. ..++.++|+.+|.+.. + -..+..
T Consensus 671 ------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~ 738 (755)
T KOG2100|consen 671 ------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYE 738 (755)
T ss_pred ------------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHH
Confidence 01222244555555 999999999999988877776553 2689999999999988 4 356677
Q ss_pred HHHHHHccc
Q 019314 330 IIKALLLGE 338 (343)
Q Consensus 330 ~i~~fl~~~ 338 (343)
.+..|+..+
T Consensus 739 ~~~~~~~~~ 747 (755)
T KOG2100|consen 739 KLDRFLRDC 747 (755)
T ss_pred HHHHHHHHH
Confidence 777777654
No 130
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.07 E-value=9e-09 Score=77.88 Aligned_cols=62 Identities=16% Similarity=0.215 Sum_probs=49.7
Q ss_pred CCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC---cchHHHHHHHHHcc
Q 019314 275 FPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA---DGMTEAIIKALLLG 337 (343)
Q Consensus 275 ~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e---p~~~~~~i~~fl~~ 337 (343)
.+.|++|.|.|.|+.|.++|...+..+++.++++.+..-| +||+++.. .+.+++.|..++++
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHHHh
Confidence 5678888999999999999999999999999999777777 59998873 34455555555543
No 131
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.04 E-value=4e-09 Score=81.70 Aligned_cols=98 Identities=19% Similarity=0.163 Sum_probs=69.7
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCc----cHHHHHHHHHHHHHHh-----
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKR----TRKSLALDIEELADQL----- 125 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~----~~~~~~~di~~~l~~l----- 125 (343)
-|.|+|+||+...... |..+. ..++.. ||-|+++++-..- . +... +....++.+..-+.++
T Consensus 46 yPVilF~HG~~l~ns~-----Ys~lL-~HIASH-GfIVVAPQl~~~~--~-p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V 115 (307)
T PF07224_consen 46 YPVILFLHGFNLYNSF-----YSQLL-AHIASH-GFIVVAPQLYTLF--P-PDGQDEIKSAASVINWLPEGLQHVLPENV 115 (307)
T ss_pred ccEEEEeechhhhhHH-----HHHHH-HHHhhc-CeEEEechhhccc--C-CCchHHHHHHHHHHHHHHhhhhhhCCCCc
Confidence 5899999999988777 77775 888776 9999999997431 1 1111 1222222222222222
Q ss_pred --CCCCeEEEEEecccHHHHHHHHHHhhc--ccceeEEEccc
Q 019314 126 --GLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALIAPV 163 (343)
Q Consensus 126 --~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~~~~ 163 (343)
++ .++.++|||.||..|..+|+.+.. .+.++|.++|.
T Consensus 116 ~~nl-~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 116 EANL-SKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred cccc-ceEEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 35 699999999999999999998742 58899999986
No 132
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.03 E-value=1.7e-08 Score=85.86 Aligned_cols=75 Identities=15% Similarity=0.223 Sum_probs=60.8
Q ss_pred CcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHh-----CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 89 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL-----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 89 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l-----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
|+.|+.+.+. .++.++.++.|.+....++++.+ +. .+.+|||.|.||..++.+|+.+|+.+.-+|+.++.
T Consensus 100 GHPvYFV~F~----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~-~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaP 174 (581)
T PF11339_consen 100 GHPVYFVGFF----PEPEPGQTLEDVMRAEAAFVEEVAERHPDA-PKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAP 174 (581)
T ss_pred CCCeEEEEec----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCC-CCceEEeccHHHHHHHHHHhcCcCccCceeecCCC
Confidence 8888877664 34455679999988888888765 23 38999999999999999999999999998888887
Q ss_pred ccccC
Q 019314 164 INYWW 168 (343)
Q Consensus 164 ~~~~~ 168 (343)
..++.
T Consensus 175 lsywa 179 (581)
T PF11339_consen 175 LSYWA 179 (581)
T ss_pred ccccc
Confidence 77654
No 133
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.03 E-value=4e-09 Score=89.95 Aligned_cols=101 Identities=19% Similarity=0.295 Sum_probs=59.9
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc-ccC-----CC-----C-------C-------C
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY-GES-----DP-----D-------P-------K 108 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S-----~~-----~-------~-------~ 108 (343)
.-|+|||-||++++... +..++ ..|+.+ ||-|+++|+|.. +-. ++ . . .
T Consensus 99 ~~PvvIFSHGlgg~R~~-----yS~~~-~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTS-----YSAIC-GELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRD 171 (379)
T ss_dssp -EEEEEEE--TT--TTT-----THHHH-HHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE---
T ss_pred CCCEEEEeCCCCcchhh-----HHHHH-HHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccc
Confidence 36899999999999999 88887 999987 999999999953 110 00 0 0 0
Q ss_pred ----c-------cHHHHHHHHHHHHHHh--------------------------CCCCeEEEEEecccHHHHHHHHHHhh
Q 019314 109 ----R-------TRKSLALDIEELADQL--------------------------GLGSKFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 109 ----~-------~~~~~~~di~~~l~~l--------------------------~~~~~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
. .++.-++++..+++.+ +. +++.++|||+||..++..+.+.
T Consensus 172 ~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~-~~i~~~GHSFGGATa~~~l~~d- 249 (379)
T PF03403_consen 172 FDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDL-SRIGLAGHSFGGATALQALRQD- 249 (379)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEE-EEEEEEEETHHHHHHHHHHHH--
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcch-hheeeeecCchHHHHHHHHhhc-
Confidence 0 0111233444444332 13 5799999999999999888765
Q ss_pred cccceeEEEccc
Q 019314 152 HRLTGAALIAPV 163 (343)
Q Consensus 152 ~~v~~lil~~~~ 163 (343)
.++++.|++++.
T Consensus 250 ~r~~~~I~LD~W 261 (379)
T PF03403_consen 250 TRFKAGILLDPW 261 (379)
T ss_dssp TT--EEEEES--
T ss_pred cCcceEEEeCCc
Confidence 689999999985
No 134
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.02 E-value=4.6e-10 Score=88.25 Aligned_cols=36 Identities=17% Similarity=0.309 Sum_probs=31.6
Q ss_pred CeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 129 SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
+++.|+|.|.||-+|+.+|..+| .|+++|.++|..-
T Consensus 22 ~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 22 DKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred CCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 68999999999999999999999 7999999998643
No 135
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=1e-08 Score=88.89 Aligned_cols=225 Identities=18% Similarity=0.106 Sum_probs=135.4
Q ss_pred eeecCccEEEEEeccC-----CCCCCeEEEecCCCCCcccchhhhhhhhh-hHHHHhHcCcEEEEecCCCcccCCCC---
Q 019314 36 LQQTSHQYLKFLNSIE-----YPTSLLHLNFHLFNGCVGSLNFTVLACLS-FQEVVDELGIYIVSFDRPGYGESDPD--- 106 (343)
Q Consensus 36 ~~~~~~~~l~y~~~g~-----~~~~~~vv~ihG~~~~~~~~~~~~~~~~~-~~~l~~~~g~~vi~~D~~G~G~S~~~--- 106 (343)
++...|..++-..+.+ ++.-|+++++-|+++-.-..+-.-|...+ +..|+. +||-|+++|-||.......
T Consensus 618 fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~Las-lGy~Vv~IDnRGS~hRGlkFE~ 696 (867)
T KOG2281|consen 618 FQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLAS-LGYVVVFIDNRGSAHRGLKFES 696 (867)
T ss_pred eecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhh-cceEEEEEcCCCccccchhhHH
Confidence 3455555555444433 34468999999998643321000021111 133443 4999999999997544311
Q ss_pred -----CC-ccHHHHHHHHHHHHHHh---CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccccccCCCCCccchH
Q 019314 107 -----PK-RTRKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTK 177 (343)
Q Consensus 107 -----~~-~~~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~ 177 (343)
-+ -.++|+++-+.-+.+.. +. +++.|-|||+||.++++...++|+-++..|.-+|... |........
T Consensus 697 ~ik~kmGqVE~eDQVeglq~Laeq~gfidm-drV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~--W~~YDTgYT- 772 (867)
T KOG2281|consen 697 HIKKKMGQVEVEDQVEGLQMLAEQTGFIDM-DRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTD--WRLYDTGYT- 772 (867)
T ss_pred HHhhccCeeeehhhHHHHHHHHHhcCcccc-hheeEeccccccHHHHHHhhcCcceeeEEeccCccee--eeeecccch-
Confidence 11 27889999999888887 45 6999999999999999999999987776666555422 110000000
Q ss_pred HHHhhccccchHHHHHhhhchHHHhhhhccCCCCcchhcccCccccchhhhhhhhHHHHHHHHHHHhhhhhchhhhHHHH
Q 019314 178 EAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDM 257 (343)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (343)
.++ ..+++.+...+.. .++.
T Consensus 773 -----------------------------ERY-----------Mg~P~~nE~gY~a-----------------gSV~--- 792 (867)
T KOG2281|consen 773 -----------------------------ERY-----------MGYPDNNEHGYGA-----------------GSVA--- 792 (867)
T ss_pred -----------------------------hhh-----------cCCCccchhcccc-----------------hhHH---
Confidence 000 0000000000000 0000
Q ss_pred HhccCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCChhHHHHHhhcC----CCceEEEcCCCCCcccc-C-cchHHHHH
Q 019314 258 MIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL----PWIRYHEIPGSGHLIAD-A-DGMTEAII 331 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-e-p~~~~~~i 331 (343)
.....+|.=....|++||--|..|.......+...+ +.-++.++|+.-|.+-. | .......+
T Consensus 793 ------------~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rl 860 (867)
T KOG2281|consen 793 ------------GHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARL 860 (867)
T ss_pred ------------HHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHH
Confidence 000114433444899999999999887765555443 34589999999999887 5 66677778
Q ss_pred HHHHcc
Q 019314 332 KALLLG 337 (343)
Q Consensus 332 ~~fl~~ 337 (343)
..|+++
T Consensus 861 l~FlQ~ 866 (867)
T KOG2281|consen 861 LHFLQE 866 (867)
T ss_pred HHHHhh
Confidence 888865
No 136
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.00 E-value=2.1e-08 Score=79.39 Aligned_cols=94 Identities=18% Similarity=0.222 Sum_probs=68.5
Q ss_pred EecCCC--CCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHh-CCCCeEEEEEe
Q 019314 60 NFHLFN--GCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL-GLGSKFYVVGF 136 (343)
Q Consensus 60 ~ihG~~--~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l-~~~~~~~lvG~ 136 (343)
++|+.+ ++... |.++. ..+.. .+.|+++|.+|++.+... ..+++++++.+...+... .. .+++++||
T Consensus 2 ~~~~~~~~~~~~~-----~~~~~-~~l~~--~~~v~~~~~~g~~~~~~~-~~~~~~~~~~~~~~l~~~~~~-~~~~l~g~ 71 (212)
T smart00824 2 CFPSTAAPSGPHE-----YARLA-AALRG--RRDVSALPLPGFGPGEPL-PASADALVEAQAEAVLRAAGG-RPFVLVGH 71 (212)
T ss_pred ccCCCCCCCcHHH-----HHHHH-HhcCC--CccEEEecCCCCCCCCCC-CCCHHHHHHHHHHHHHHhcCC-CCeEEEEE
Confidence 455543 55566 77775 66665 478999999999876543 346777777666555443 34 68999999
Q ss_pred cccHHHHHHHHHHh---hcccceeEEEccc
Q 019314 137 SMGGQVVWSCLKYI---SHRLTGAALIAPV 163 (343)
Q Consensus 137 S~Gg~~a~~~a~~~---p~~v~~lil~~~~ 163 (343)
|+||.++..++.+. ++.+.+++++++.
T Consensus 72 s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 72 SSGGLLAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEEccC
Confidence 99999999999864 4568999988874
No 137
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.93 E-value=1.3e-08 Score=76.43 Aligned_cols=102 Identities=17% Similarity=0.177 Sum_probs=70.9
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCC-------------------CCCCccHHHHH
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESD-------------------PDPKRTRKSLA 115 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~-------------------~~~~~~~~~~~ 115 (343)
..+||++||.+.+... |.+++ ..+.-. +..-|+|.-|-.-.+. .....++...+
T Consensus 3 ~atIi~LHglGDsg~~-----~~~~~-~~l~l~-NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa 75 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSG-----WAQFL-KQLPLP-NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAA 75 (206)
T ss_pred eEEEEEEecCCCCCcc-----HHHHH-HcCCCC-CeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHH
Confidence 4589999999999999 87775 664433 5667777544322111 11112455566
Q ss_pred HHHHHHHHHh---CCC-CeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 116 LDIEELADQL---GLG-SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 116 ~di~~~l~~l---~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
+.+..+++.. ++. .++.+-|.|+||.+++..+..+|..+.+.+..++.
T Consensus 76 ~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 76 DNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 6677777664 321 47889999999999999999998888888777764
No 138
>PRK04940 hypothetical protein; Provisional
Probab=98.93 E-value=5.1e-08 Score=72.68 Aligned_cols=34 Identities=12% Similarity=0.139 Sum_probs=29.3
Q ss_pred CeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 129 SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
+++.|||+|+||..|..+|.++. -..|+++|++.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g---~~aVLiNPAv~ 93 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG---IRQVIFNPNLF 93 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC---CCEEEECCCCC
Confidence 47999999999999999999986 36688999753
No 139
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.92 E-value=7.7e-09 Score=89.31 Aligned_cols=85 Identities=19% Similarity=0.201 Sum_probs=65.1
Q ss_pred hhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC---ccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhc
Q 019314 76 LACLSFQEVVDELGIYIVSFDRPGYGESDPDPK---RTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH 152 (343)
Q Consensus 76 ~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 152 (343)
|..++ +.|.+. ||.+ ..|++|+|.+.+... ...+++.+.++++.+..+. ++++|+||||||.++..++..+|+
T Consensus 110 ~~~li-~~L~~~-GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~-~kV~LVGHSMGGlva~~fl~~~p~ 185 (440)
T PLN02733 110 FHDMI-EQLIKW-GYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGG-KKVNIISHSMGGLLVKCFMSLHSD 185 (440)
T ss_pred HHHHH-HHHHHc-CCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCC-CCEEEEEECHhHHHHHHHHHHCCH
Confidence 88998 888875 8744 899999999875432 1344455555555555566 799999999999999999998886
Q ss_pred c----cceeEEEcccc
Q 019314 153 R----LTGAALIAPVI 164 (343)
Q Consensus 153 ~----v~~lil~~~~~ 164 (343)
. |+++|.+++..
T Consensus 186 ~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 186 VFEKYVNSWIAIAAPF 201 (440)
T ss_pred hHHhHhccEEEECCCC
Confidence 3 78999998753
No 140
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.91 E-value=1.8e-09 Score=90.15 Aligned_cols=105 Identities=12% Similarity=0.182 Sum_probs=66.6
Q ss_pred CCCCCeEEEecCCCCCc--ccchhhhhhhhhhHHHHhH--cCcEEEEecCCCcccCCCCCCc-----cHHHHHHHHHHHH
Q 019314 52 YPTSLLHLNFHLFNGCV--GSLNFTVLACLSFQEVVDE--LGIYIVSFDRPGYGESDPDPKR-----TRKSLALDIEELA 122 (343)
Q Consensus 52 ~~~~~~vv~ihG~~~~~--~~~~~~~~~~~~~~~l~~~--~g~~vi~~D~~G~G~S~~~~~~-----~~~~~~~di~~~l 122 (343)
+..+|++|++||+..+. ..| ...+. ..+.+. .++.||++||...-.. .| ......+.+..+|
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~----~~~~~-~all~~~~~d~NVI~VDWs~~a~~----~Y~~a~~n~~~vg~~la~~l 138 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESW----IQDMI-KALLQKDTGDYNVIVVDWSRGASN----NYPQAVANTRLVGRQLAKFL 138 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTH----HHHHH-HHHHCC--S-EEEEEEE-HHHHSS-----HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhH----HHHHH-HHHHhhccCCceEEEEcchhhccc----cccchhhhHHHHHHHHHHHH
Confidence 45689999999999888 331 22333 555554 4799999999643211 12 3344444555555
Q ss_pred HHh------CCCCeEEEEEecccHHHHHHHHHHhhc--ccceeEEEcccccc
Q 019314 123 DQL------GLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALIAPVINY 166 (343)
Q Consensus 123 ~~l------~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~~~ 166 (343)
+.| .. ++++|||||+||++|-.++..... +|..++.++|+.+.
T Consensus 139 ~~L~~~~g~~~-~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 139 SFLINNFGVPP-ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp HHHHHHH---G-GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred HHHHhhcCCCh-hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 443 34 799999999999999999988877 89999999998654
No 141
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.88 E-value=1.1e-08 Score=79.73 Aligned_cols=85 Identities=20% Similarity=0.199 Sum_probs=49.8
Q ss_pred CeEEEecCCCC-CcccchhhhhhhhhhHHHHhHcCcE---EEEecCCCcccCCCCCC-----ccHHHHHHHHHHHHHHhC
Q 019314 56 LLHLNFHLFNG-CVGSLNFTVLACLSFQEVVDELGIY---IVSFDRPGYGESDPDPK-----RTRKSLALDIEELADQLG 126 (343)
Q Consensus 56 ~~vv~ihG~~~-~~~~~~~~~~~~~~~~~l~~~~g~~---vi~~D~~G~G~S~~~~~-----~~~~~~~~di~~~l~~l~ 126 (343)
.||||+||.++ .... |..++ +.|.++ ||. |+++++-....+..... .+..++++-|.+++++-+
T Consensus 2 ~PVVlVHG~~~~~~~~-----w~~~~-~~l~~~-GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TG 74 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSN-----WSTLA-PYLKAA-GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTG 74 (219)
T ss_dssp --EEEE--TTTTTCGG-----CCHHH-HHHHHT-T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCCcchhhC-----HHHHH-HHHHHc-CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhC
Confidence 47999999998 5566 88887 888776 998 89999854433221110 122344444444555556
Q ss_pred CCCeEEEEEecccHHHHHHHHHH
Q 019314 127 LGSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 127 ~~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
- +|.||||||||.++-.+...
T Consensus 75 a--kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 75 A--KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp ----EEEEEETCHHHHHHHHHHH
T ss_pred C--EEEEEEcCCcCHHHHHHHHH
Confidence 3 99999999999999877754
No 142
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.86 E-value=9.4e-08 Score=78.86 Aligned_cols=60 Identities=28% Similarity=0.366 Sum_probs=44.2
Q ss_pred CCcEEEEecCCCCCCChhHHHHHhhcC-----CCceEEEcCCCCCcccc-C-cchHHHHHHHHHccc
Q 019314 279 EGSVHLWQGDEDRLVPVILQRYISKKL-----PWIRYHEIPGSGHLIAD-A-DGMTEAIIKALLLGE 338 (343)
Q Consensus 279 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~-e-p~~~~~~i~~fl~~~ 338 (343)
++|+++.+|..|.++|...++.+.+.+ .+++++.+++.+|.... . .......+.+-+.+.
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~G~ 285 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFAGK 285 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHCCC
Confidence 678999999999999988776665543 35788899999998765 3 444556666555543
No 143
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.85 E-value=6.2e-09 Score=85.43 Aligned_cols=91 Identities=23% Similarity=0.223 Sum_probs=64.6
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc--ccCCCCC----Cc---cHHHHHHHHHHHHHH
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY--GESDPDP----KR---TRKSLALDIEELADQ 124 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~--G~S~~~~----~~---~~~~~~~di~~~l~~ 124 (343)
.-|.|++-||.+..... +.-++ +.+++. ||-|.++|.+|- |+.+... .+ -..+...|+..+|+.
T Consensus 70 ~~PlvvlshG~Gs~~~~-----f~~~A-~~lAs~-Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~ 142 (365)
T COG4188 70 LLPLVVLSHGSGSYVTG-----FAWLA-EHLASY-GFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDA 142 (365)
T ss_pred cCCeEEecCCCCCCccc-----hhhhH-HHHhhC-ceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHH
Confidence 46899999999999888 66676 788766 999999999993 4333111 01 223444455555544
Q ss_pred h-------------CCCCeEEEEEecccHHHHHHHHHHhhc
Q 019314 125 L-------------GLGSKFYVVGFSMGGQVVWSCLKYISH 152 (343)
Q Consensus 125 l-------------~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 152 (343)
| +. .+|.++|||+||..++..+.-+.+
T Consensus 143 L~~~~~sP~l~~~ld~-~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 143 LLQLTASPALAGRLDP-QRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred HHHhhcCcccccccCc-cceEEEecccccHHHHHhcccccc
Confidence 3 33 589999999999999998865443
No 144
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.82 E-value=2e-06 Score=70.03 Aligned_cols=113 Identities=23% Similarity=0.235 Sum_probs=78.5
Q ss_pred eeecCccEEEEEecc--CCCCCCeEEEecCCCCCcccchh-hhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHH
Q 019314 36 LQQTSHQYLKFLNSI--EYPTSLLHLNFHLFNGCVGSLNF-TVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRK 112 (343)
Q Consensus 36 ~~~~~~~~l~y~~~g--~~~~~~~vv~ihG~~~~~~~~~~-~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 112 (343)
....|+..+--..-. ..+....||+.-|.++.-+...- .+.... |..+++..+-.|+.+++||.|.|.+.. +.+
T Consensus 116 ~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~-~~~~ak~~~aNvl~fNYpGVg~S~G~~--s~~ 192 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDW-IQRFAKELGANVLVFNYPGVGSSTGPP--SRK 192 (365)
T ss_pred EEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHH-HHHHHHHcCCcEEEECCCccccCCCCC--CHH
Confidence 444566665544332 23457799999998876655100 000012 366777778899999999999998765 468
Q ss_pred HHHHHHHHHHHHhC-----C-CCeEEEEEecccHHHHHHHHHHhh
Q 019314 113 SLALDIEELADQLG-----L-GSKFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 113 ~~~~di~~~l~~l~-----~-~~~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
++++|-.+.+++|. + .+.+++.|||+||.++..++.++.
T Consensus 193 dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 193 DLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred HHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 99998888888772 1 168999999999999988666543
No 145
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.80 E-value=4.9e-08 Score=77.70 Aligned_cols=104 Identities=18% Similarity=0.327 Sum_probs=70.0
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCc--EEEEecCCCcccCCCC--CCccHHHHHHHHHHHHHHh----
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGI--YIVSFDRPGYGESDPD--PKRTRKSLALDIEELADQL---- 125 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~--~vi~~D~~G~G~S~~~--~~~~~~~~~~di~~~l~~l---- 125 (343)
++..+|||||+..+... -...+ ..+....++ .++.+.||..|.-..- ...+...-...+.++++.+
T Consensus 17 ~~~vlvfVHGyn~~f~~-----a~~r~-aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~ 90 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFED-----ALRRA-AQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAP 90 (233)
T ss_pred CCeEEEEEeCCCCCHHH-----HHHHH-HHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 57899999999988665 22222 445544444 7999999988763221 1113333444555555554
Q ss_pred CCCCeEEEEEecccHHHHHHHHHHh----h-----cccceeEEEcccc
Q 019314 126 GLGSKFYVVGFSMGGQVVWSCLKYI----S-----HRLTGAALIAPVI 164 (343)
Q Consensus 126 ~~~~~~~lvG~S~Gg~~a~~~a~~~----p-----~~v~~lil~~~~~ 164 (343)
+. ++++|++||||+.+.+...... + .++..+++++|-+
T Consensus 91 ~~-~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 91 GI-KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred CC-ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 45 7999999999999998876541 1 3688999999864
No 146
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.74 E-value=1.4e-07 Score=74.77 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=86.4
Q ss_pred eecCccEEEEEeccC---CCCCCeEEEecCCCCCcccchhhhhhhhh-hHHHHhHcCcEEEEecCC-------CcccCCC
Q 019314 37 QQTSHQYLKFLNSIE---YPTSLLHLNFHLFNGCVGSLNFTVLACLS-FQEVVDELGIYIVSFDRP-------GYGESDP 105 (343)
Q Consensus 37 ~~~~~~~l~y~~~g~---~~~~~~vv~ihG~~~~~~~~~~~~~~~~~-~~~l~~~~g~~vi~~D~~-------G~G~S~~ 105 (343)
...++....|..+-+ +++.|.||.+||..++... ..... |+.++++.||-|+.||-- +.+.+..
T Consensus 40 ~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-----~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~ 114 (312)
T COG3509 40 FDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-----QLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFG 114 (312)
T ss_pred cccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHH-----hhcccchhhhhcccCcEEECcCccccccCCCcccccCC
Confidence 345666666665533 4556899999999988776 22211 578888889999999532 2222211
Q ss_pred CCC-----ccHHHHHHHHHHHHHHhCCC-CeEEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 106 DPK-----RTRKSLALDIEELADQLGLG-SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 106 ~~~-----~~~~~~~~di~~~l~~l~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
+.+ .++..+.+.+..++.+.+++ .+|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 115 p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 115 PADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 211 14445566666666666663 589999999999999999999999999999998864
No 147
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.73 E-value=9.4e-07 Score=77.75 Aligned_cols=119 Identities=21% Similarity=0.204 Sum_probs=76.5
Q ss_pred CccEEEEEeccC---CCCCCeEEEecCCCCCcccchhhhhhhhhhH---HHHh-H-------------cCcEEEEecCC-
Q 019314 40 SHQYLKFLNSIE---YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQ---EVVD-E-------------LGIYIVSFDRP- 98 (343)
Q Consensus 40 ~~~~l~y~~~g~---~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~---~l~~-~-------------~g~~vi~~D~~- 98 (343)
.+..++|.-... .+.+|.||++.|+++++.. |..+. + .... . .-..++.+|.|
T Consensus 22 ~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-----~g~f~-e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~Pv 95 (415)
T PF00450_consen 22 ENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-----WGLFG-ENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPV 95 (415)
T ss_dssp TTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-----HHHHC-TTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--ST
T ss_pred CCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-----ccccc-ccCceEEeecccccccccccccccccceEEEeecC
Confidence 567777765432 4568999999999999888 32211 0 0000 0 02579999955
Q ss_pred CcccCCCCCC----ccHHHHHHHHHHHHHHh-------CCCCeEEEEEecccHHHHHHHHHH----h------hccccee
Q 019314 99 GYGESDPDPK----RTRKSLALDIEELADQL-------GLGSKFYVVGFSMGGQVVWSCLKY----I------SHRLTGA 157 (343)
Q Consensus 99 G~G~S~~~~~----~~~~~~~~di~~~l~~l-------~~~~~~~lvG~S~Gg~~a~~~a~~----~------p~~v~~l 157 (343)
|.|.|..... .+.++.++++.++|... .- .+++|.|-|+||..+..+|.. . +=.++++
T Consensus 96 GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~-~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi 174 (415)
T PF00450_consen 96 GTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRS-NPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGI 174 (415)
T ss_dssp TSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTT-SEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEE
T ss_pred ceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccC-CCEEEEccccccccchhhHHhhhhccccccccccccccc
Confidence 8999964433 26788888888888764 33 599999999999998877754 2 2248899
Q ss_pred EEEccccc
Q 019314 158 ALIAPVIN 165 (343)
Q Consensus 158 il~~~~~~ 165 (343)
++.+|.++
T Consensus 175 ~IGng~~d 182 (415)
T PF00450_consen 175 AIGNGWID 182 (415)
T ss_dssp EEESE-SB
T ss_pred eecCcccc
Confidence 99998765
No 148
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.70 E-value=2e-06 Score=66.61 Aligned_cols=104 Identities=19% Similarity=0.234 Sum_probs=73.9
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcC----cEEEEecCCCc----ccCCCCC------------CccHHHH
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELG----IYIVSFDRPGY----GESDPDP------------KRTRKSL 114 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g----~~vi~~D~~G~----G~S~~~~------------~~~~~~~ 114 (343)
.-|.|||||++++..+ ...++ .++..+.. --++.+|--|- |.-++.. ..+..++
T Consensus 45 ~iPTIfIhGsgG~asS-----~~~Mv-~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~ 118 (288)
T COG4814 45 AIPTIFIHGSGGTASS-----LNGMV-NQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQ 118 (288)
T ss_pred ccceEEEecCCCChhH-----HHHHH-HHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhH
Confidence 3468999999999999 77776 78776521 12556666552 2112111 1256677
Q ss_pred HHHHHHHHHHh----CCCCeEEEEEecccHHHHHHHHHHhhc-----ccceeEEEccccc
Q 019314 115 ALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISH-----RLTGAALIAPVIN 165 (343)
Q Consensus 115 ~~di~~~l~~l----~~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lil~~~~~~ 165 (343)
...+..++..| ++ .++.+|||||||.-...|+..+.. .++.+|.+++..+
T Consensus 119 s~wlk~~msyL~~~Y~i-~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 119 SKWLKKAMSYLQKHYNI-PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHHhcCC-ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 77777777766 67 699999999999999999987643 4899999988643
No 149
>PLN02606 palmitoyl-protein thioesterase
Probab=98.69 E-value=1.6e-06 Score=69.96 Aligned_cols=100 Identities=18% Similarity=0.178 Sum_probs=64.3
Q ss_pred CCeEEEecCCC--CCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHH---HhCCCC
Q 019314 55 SLLHLNFHLFN--GCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELAD---QLGLGS 129 (343)
Q Consensus 55 ~~~vv~ihG~~--~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~---~l~~~~ 129 (343)
..|||+.||++ .+... +..+. +.+.+..|+.+.++. .|-+..+. --..+.++++.+.+.+. .+. +
T Consensus 26 ~~PvViwHGlgD~~~~~~-----~~~~~-~~i~~~~~~pg~~v~-ig~~~~~s-~~~~~~~Qv~~vce~l~~~~~L~--~ 95 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGK-----VSNLT-QFLINHSGYPGTCVE-IGNGVQDS-LFMPLRQQASIACEKIKQMKELS--E 95 (306)
T ss_pred CCCEEEECCCCcccCCch-----HHHHH-HHHHhCCCCCeEEEE-ECCCcccc-cccCHHHHHHHHHHHHhcchhhc--C
Confidence 56899999999 55545 66664 444212255555554 23222110 00144455554444443 333 4
Q ss_pred eEEEEEecccHHHHHHHHHHhhc--ccceeEEEcccc
Q 019314 130 KFYVVGFSMGGQVVWSCLKYISH--RLTGAALIAPVI 164 (343)
Q Consensus 130 ~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~ 164 (343)
-+++||+|.||.++-.++.+.|+ .|+.+|.+++..
T Consensus 96 G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred ceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 79999999999999999999887 599999998754
No 150
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.64 E-value=2.9e-07 Score=76.39 Aligned_cols=106 Identities=20% Similarity=0.220 Sum_probs=59.7
Q ss_pred CCCeEEEecCCCCCccc----ch--------hhhh-hhhhhHHHHhHcCcEEEEecCCCcccCCCCCC------ccHHHH
Q 019314 54 TSLLHLNFHLFNGCVGS----LN--------FTVL-ACLSFQEVVDELGIYIVSFDRPGYGESDPDPK------RTRKSL 114 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~----~~--------~~~~-~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~------~~~~~~ 114 (343)
..|+||++||-++..+. +. ...+ .... ..|+++ ||-|+++|.+|+|+...... ++.+.+
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g-~~LAk~-GYVvla~D~~g~GER~~~e~~~~~~~~~~~~l 191 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYG-DQLAKR-GYVVLAPDALGFGERGDMEGAAQGSNYDCQAL 191 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HH-HHHHTT-TSEEEEE--TTSGGG-SSCCCTTTTS--HHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHH-HHHHhC-CCEEEEEccccccccccccccccccchhHHHH
Confidence 46899999998765422 00 0001 1233 556665 99999999999998754321 122222
Q ss_pred ---------------HHHHHHHHHHhC------CCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 115 ---------------ALDIEELADQLG------LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 115 ---------------~~di~~~l~~l~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
+-|....++.|. . ++|.++|+||||..++.+|+.. ++|++.|..+-.
T Consensus 192 a~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~-~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 192 ARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDP-DRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp HHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEE-EEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCc-cceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhh
Confidence 223334555552 3 6899999999999999999985 589888877653
No 151
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.63 E-value=4.6e-07 Score=73.10 Aligned_cols=99 Identities=19% Similarity=0.250 Sum_probs=69.9
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC--ccHHHHHHHHHHHHHHhCCC-CeE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK--RTRKSLALDIEELADQLGLG-SKF 131 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~di~~~l~~l~~~-~~~ 131 (343)
...||+.-|..+--+. .++ ..-+ +.||.|+.+++||++.|.+.+- .+....-.-+.-.|+.|+.. +.+
T Consensus 243 q~LvIC~EGNAGFYEv-------G~m-~tP~-~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edI 313 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEV-------GVM-NTPA-QLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDI 313 (517)
T ss_pred ceEEEEecCCccceEe-------eee-cChH-HhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccce
Confidence 3456666676554443 222 2223 3389999999999999986543 24443333445556667642 689
Q ss_pred EEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 132 YVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 132 ~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
++.|||.||.-+..+|..||+ |+++||-++.
T Consensus 314 ilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 314 ILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred EEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 999999999999999999997 9999988774
No 152
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.60 E-value=4.2e-07 Score=72.40 Aligned_cols=115 Identities=10% Similarity=0.115 Sum_probs=74.4
Q ss_pred CccEEEEEeccC----CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCC------C--CC
Q 019314 40 SHQYLKFLNSIE----YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESD------P--DP 107 (343)
Q Consensus 40 ~~~~l~y~~~g~----~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~------~--~~ 107 (343)
...++...+.++ +..-|.|||-||++++... |..+. ..|+.. ||-|.+++.|-+--+- . .+
T Consensus 99 gs~r~~~~~n~~~~tk~~k~PvvvFSHGLggsRt~-----YSa~c-~~LASh-G~VVaavEHRD~SA~~Ty~~~~~~~n~ 171 (399)
T KOG3847|consen 99 GSKRVPCIENAPLSTKNDKYPVVVFSHGLGGSRTL-----YSAYC-TSLASH-GFVVAAVEHRDRSACWTYVLKEKHENE 171 (399)
T ss_pred ccccccccccCCCCCCCCCccEEEEecccccchhh-----HHHHh-hhHhhC-ceEEEEeecccCcceeEEEecccccCC
Confidence 344455544443 1234899999999999999 88887 888876 9999999998654321 1 00
Q ss_pred C----------------------ccHHHHHHHHHHHH---HHh------------------------CCCCeEEEEEecc
Q 019314 108 K----------------------RTRKSLALDIEELA---DQL------------------------GLGSKFYVVGFSM 138 (343)
Q Consensus 108 ~----------------------~~~~~~~~di~~~l---~~l------------------------~~~~~~~lvG~S~ 138 (343)
. ..+..-++.+...+ +.+ +. .++.|+|||+
T Consensus 172 ~lveq~~~ir~v~~~ekef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~-s~~aViGHSF 250 (399)
T KOG3847|consen 172 PLVEQWIKIRLVEANEKEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDT-SQAAVIGHSF 250 (399)
T ss_pred cccccceEeeeeccCceeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhh-hhhhheeccc
Confidence 0 01111222222222 211 12 4789999999
Q ss_pred cHHHHHHHHHHhhcccceeEEEccc
Q 019314 139 GGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 139 Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
||..++.....+. +++..|++++.
T Consensus 251 GgAT~i~~ss~~t-~FrcaI~lD~W 274 (399)
T KOG3847|consen 251 GGATSIASSSSHT-DFRCAIALDAW 274 (399)
T ss_pred cchhhhhhhcccc-ceeeeeeeeee
Confidence 9999988777654 58888888874
No 153
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.51 E-value=4.5e-06 Score=65.03 Aligned_cols=57 Identities=19% Similarity=0.149 Sum_probs=50.0
Q ss_pred EEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCcccc-C-cchHHHHHHHHHcccc
Q 019314 282 VHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIAD-A-DGMTEAIIKALLLGEK 339 (343)
Q Consensus 282 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e-p~~~~~~i~~fl~~~~ 339 (343)
+.++.+++|..+|......+.+.+|+++++.++ .||.-.+ - .+.+.+.|.+-|+...
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 788899999999999999999999999999999 5997766 3 8899999999887653
No 154
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.49 E-value=4.7e-06 Score=73.17 Aligned_cols=130 Identities=13% Similarity=-0.013 Sum_probs=85.9
Q ss_pred eeeeecCccEEEEEeccCC--CCCCeEEEecCCCCCcccchhhhhhhhhhH---HHHhHcCcEEEEecCCCcccCCCCCC
Q 019314 34 LLLQQTSHQYLKFLNSIEY--PTSLLHLNFHLFNGCVGSLNFTVLACLSFQ---EVVDELGIYIVSFDRPGYGESDPDPK 108 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g~~--~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~---~l~~~~g~~vi~~D~~G~G~S~~~~~ 108 (343)
..+..-||++|+-..+-+. ...|+++..+-++-....+.+..-.... + .++.. ||.|+..|.||.|.|++.-.
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~-p~~~~~aa~-GYavV~qDvRG~~~SeG~~~ 99 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSAL-PQPAWFAAQ-GYAVVNQDVRGRGGSEGVFD 99 (563)
T ss_pred eeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcc-cccceeecC-ceEEEEecccccccCCcccc
Confidence 5678889999998777653 3467888888223222210000000111 2 24444 99999999999999987544
Q ss_pred ccHHHHHHHHHHHHHHh---CC-CCeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 109 RTRKSLALDIEELADQL---GL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 109 ~~~~~~~~di~~~l~~l---~~-~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
....+-++|-.+.|+.+ .. +.+|..+|.|++|...+.+|+..|..+++++..++..+
T Consensus 100 ~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 100 PESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred eeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 32223344444444443 11 25999999999999999999998888999998888765
No 155
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.48 E-value=1.5e-06 Score=59.56 Aligned_cols=78 Identities=18% Similarity=0.274 Sum_probs=62.1
Q ss_pred cCCCCCCCCCCCCC-CCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHccc
Q 019314 261 FGTWEFDPMDLENP-FPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGE 338 (343)
Q Consensus 261 ~~~~~~~~~~~~~~-~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~ 338 (343)
...|.......... ..+-..|+|++.++.|++.|.+.++.+++.+++++++++++.||..... ...+.+++.+||..-
T Consensus 15 C~~Wp~~~~~~~~~~~~~~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 15 CAGWPVPPPPPPPGPGAPGAPPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred cCCCCCCCCCCCCCCCcCCCCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 44565444433221 1233589999999999999999999999999999999999999999864 788999999999743
No 156
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.48 E-value=5.7e-07 Score=75.88 Aligned_cols=100 Identities=19% Similarity=0.255 Sum_probs=76.3
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcE---EEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIY---IVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKF 131 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~ 131 (343)
.-+++++||+..+... |.++. ..+. ..|+. ++.+++++. ....+.....+.+.+-+.+++...+. +++
T Consensus 59 ~~pivlVhG~~~~~~~-----~~~~~-~~~~-~~g~~~~~~~~~~~~~~-~~~~~~~~~~~ql~~~V~~~l~~~ga-~~v 129 (336)
T COG1075 59 KEPIVLVHGLGGGYGN-----FLPLD-YRLA-ILGWLTNGVYAFELSGG-DGTYSLAVRGEQLFAYVDEVLAKTGA-KKV 129 (336)
T ss_pred CceEEEEccCcCCcch-----hhhhh-hhhc-chHHHhccccccccccc-CCCccccccHHHHHHHHHHHHhhcCC-Cce
Confidence 4589999999888888 77764 4433 33666 888888866 22222233556666677777777787 799
Q ss_pred EEEEecccHHHHHHHHHHhh--cccceeEEEccc
Q 019314 132 YVVGFSMGGQVVWSCLKYIS--HRLTGAALIAPV 163 (343)
Q Consensus 132 ~lvG~S~Gg~~a~~~a~~~p--~~v~~lil~~~~ 163 (343)
.++||||||..+..++...+ .+|+.++.+++.
T Consensus 130 ~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 130 NLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred EEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 99999999999999999888 789999999975
No 157
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.45 E-value=2.8e-06 Score=74.95 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=72.1
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC-------c-cHHHHHHHHHHHHHHh
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK-------R-TRKSLALDIEELADQL 125 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-------~-~~~~~~~di~~~l~~l 125 (343)
++|.+|++-|- ++...... -..++ ..++++.|--|+++++|-+|+|.+..+ + +.++..+|++.+++++
T Consensus 28 ~gpifl~~ggE-~~~~~~~~--~~~~~-~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~ 103 (434)
T PF05577_consen 28 GGPIFLYIGGE-GPIEPFWI--NNGFM-WELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYV 103 (434)
T ss_dssp TSEEEEEE--S-S-HHHHHH--H-HHH-HHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-Cccchhhh--cCChH-HHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHH
Confidence 36666666444 33332100 22344 778888888999999999999986432 2 7888899999998876
Q ss_pred C------CCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 126 G------LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 126 ~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
. .+.|++++|-|+||.+|..+-.+||+.|.+.+.-++.+.
T Consensus 104 ~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 104 KKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 3 125899999999999999999999999999998887654
No 158
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.44 E-value=1.4e-05 Score=66.97 Aligned_cols=108 Identities=19% Similarity=0.252 Sum_probs=72.1
Q ss_pred CCCeEEEecCCCCCcccchhhh--hhhhhhHHHHhHcCcEEEEecCCCccc--CCCCCCccHHHHHHHHHHHHHHhCCCC
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTV--LACLSFQEVVDELGIYIVSFDRPGYGE--SDPDPKRTRKSLALDIEELADQLGLGS 129 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~--~~~~~~~~l~~~~g~~vi~~D~~G~G~--S~~~~~~~~~~~~~di~~~l~~l~~~~ 129 (343)
..|.||++||+|-.-.....+. ...+ ..+.+ ...+++.|+.-... -+..-...+.+.++-...+++..|. +
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i--~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~-~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNI--YKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGN-K 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHH--HHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCC-C
Confidence 4699999999996655522221 1111 12222 34788888865431 1111224677788888888877787 7
Q ss_pred eEEEEEecccHHHHHHHHHHhh--c---ccceeEEEcccccc
Q 019314 130 KFYVVGFSMGGQVVWSCLKYIS--H---RLTGAALIAPVINY 166 (343)
Q Consensus 130 ~~~lvG~S~Gg~~a~~~a~~~p--~---~v~~lil~~~~~~~ 166 (343)
+++|+|-|.||.+++.+..... + .-+++|+++|....
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 9999999999999998876421 1 36899999998653
No 159
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.43 E-value=1.9e-05 Score=63.73 Aligned_cols=59 Identities=12% Similarity=0.000 Sum_probs=48.9
Q ss_pred CCCCcEEEEecCCCCCCChhHHHHHhhcCC----CceEEEcCCCCCcccc-C-cchHHHHHHHHH
Q 019314 277 NSEGSVHLWQGDEDRLVPVILQRYISKKLP----WIRYHEIPGSGHLIAD-A-DGMTEAIIKALL 335 (343)
Q Consensus 277 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e-p~~~~~~i~~fl 335 (343)
...+|-|+++++.|.+++.+..++.++... +++...++++.|..+. . |++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 445779999999999999988877666543 3678889999999999 4 999999998874
No 160
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.42 E-value=5.1e-05 Score=63.24 Aligned_cols=112 Identities=16% Similarity=0.075 Sum_probs=68.8
Q ss_pred EeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc--ccCC----------CCC--C----
Q 019314 47 LNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY--GESD----------PDP--K---- 108 (343)
Q Consensus 47 ~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~--G~S~----------~~~--~---- 108 (343)
+.+........||+|||.+.+... . ....++- ..|.+ .|+..+++.+|.- .... ... .
T Consensus 79 ~~~~~~~~~G~vIilp~~g~~~d~-p-~~i~~LR-~~L~~-~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~ 154 (310)
T PF12048_consen 79 RPANSAKPQGAVIILPDWGEHPDW-P-GLIAPLR-RELPD-HGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQP 154 (310)
T ss_pred ecccCCCCceEEEEecCCCCCCCc-H-hHHHHHH-HHhhh-cCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCC
Confidence 333333446799999999988642 0 0023333 34443 3999999988871 1000 000 0
Q ss_pred ------------ccH----HHHHHHHHHHHHHh---CCCCeEEEEEecccHHHHHHHHHHhhc-ccceeEEEccc
Q 019314 109 ------------RTR----KSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISH-RLTGAALIAPV 163 (343)
Q Consensus 109 ------------~~~----~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~lil~~~~ 163 (343)
... ..+.+-|.+.+..+ +. .+++||||+.|+..++.+....+. .++++|++++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~-~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 155 SDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG-KNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred CCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 011 12233344444433 43 569999999999999999988765 59999999985
No 161
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.36 E-value=0.00011 Score=59.78 Aligned_cols=101 Identities=16% Similarity=0.123 Sum_probs=65.8
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHc-CcEEEEecCCCcccCCCCCCc--cHHHHHHHHHHHHHHh-CCCCe
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDEL-GIYIVSFDRPGYGESDPDPKR--TRKSLALDIEELADQL-GLGSK 130 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~~~~~--~~~~~~~di~~~l~~l-~~~~~ 130 (343)
..|+|+.||+|.+...- ....+ ..+.+.. |..+.++.. |.+. ...+ .+.++++.+.+.+... .+.+-
T Consensus 25 ~~P~ViwHG~GD~c~~~---g~~~~--~~l~~~~~g~~~~~i~i---g~~~-~~s~~~~~~~Qve~vce~l~~~~~l~~G 95 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDA---TNANF--TQLLTNLSGSPGFCLEI---GNGV-GDSWLMPLTQQAEIACEKVKQMKELSQG 95 (314)
T ss_pred CCCeEEecCCCcccCCc---hHHHH--HHHHHhCCCCceEEEEE---CCCc-cccceeCHHHHHHHHHHHHhhchhhhCc
Confidence 56899999999765531 14444 3343432 666666654 3331 1122 4555555555444432 11247
Q ss_pred EEEEEecccHHHHHHHHHHhhc--ccceeEEEcccc
Q 019314 131 FYVVGFSMGGQVVWSCLKYISH--RLTGAALIAPVI 164 (343)
Q Consensus 131 ~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~ 164 (343)
+++||+|.||.++-.++.+.|+ .|+.+|.+++..
T Consensus 96 ~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 96 YNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 9999999999999999999987 599999998764
No 162
>PLN02209 serine carboxypeptidase
Probab=98.33 E-value=0.00021 Score=62.39 Aligned_cols=124 Identities=22% Similarity=0.202 Sum_probs=73.2
Q ss_pred ccEEEEEeccC---CCCCCeEEEecCCCCCcccchhhh-hhhhhhH---------HHHhH-----cCcEEEEec-CCCcc
Q 019314 41 HQYLKFLNSIE---YPTSLLHLNFHLFNGCVGSLNFTV-LACLSFQ---------EVVDE-----LGIYIVSFD-RPGYG 101 (343)
Q Consensus 41 ~~~l~y~~~g~---~~~~~~vv~ihG~~~~~~~~~~~~-~~~~~~~---------~l~~~-----~g~~vi~~D-~~G~G 101 (343)
+..++|.-... .+..|.|+++.|+++++..+.... -.|..+. .+... .-..++-+| ..|.|
T Consensus 51 ~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtG 130 (437)
T PLN02209 51 NVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSG 130 (437)
T ss_pred CeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCC
Confidence 55666654332 345799999999999887721000 0000000 01000 014789999 55888
Q ss_pred cCCCCC--C-ccHHHHHHHHHHHHHHh-------CCCCeEEEEEecccHHHHHHHHHHhh----------cccceeEEEc
Q 019314 102 ESDPDP--K-RTRKSLALDIEELADQL-------GLGSKFYVVGFSMGGQVVWSCLKYIS----------HRLTGAALIA 161 (343)
Q Consensus 102 ~S~~~~--~-~~~~~~~~di~~~l~~l-------~~~~~~~lvG~S~Gg~~a~~~a~~~p----------~~v~~lil~~ 161 (343)
.|-... . .+-++.++|+.+++... .- .+++|.|-|+||..+-.+|..-- =.++++++.+
T Consensus 131 fSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~-~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ign 209 (437)
T PLN02209 131 FSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLS-NPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGN 209 (437)
T ss_pred ccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccC-CCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecC
Confidence 885322 1 12334456666666543 22 58999999999998877775421 1477889888
Q ss_pred cccc
Q 019314 162 PVIN 165 (343)
Q Consensus 162 ~~~~ 165 (343)
+..+
T Consensus 210 g~td 213 (437)
T PLN02209 210 PITH 213 (437)
T ss_pred cccC
Confidence 8654
No 163
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.33 E-value=6e-06 Score=71.76 Aligned_cols=48 Identities=19% Similarity=0.245 Sum_probs=40.7
Q ss_pred CCCCCCcEEEEecCCCCCCChhHHHHHhhcCC-CceEEEcCCCCCcccc
Q 019314 275 FPNSEGSVHLWQGDEDRLVPVILQRYISKKLP-WIRYHEIPGSGHLIAD 322 (343)
Q Consensus 275 ~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~ 322 (343)
+-.++.|+||+.|.+|..++++..+.+.++.. ..+++++.+++|.+-.
T Consensus 300 Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 300 LLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred hHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 44566779999999999999999999998875 5689999999997753
No 164
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.33 E-value=0.00011 Score=64.08 Aligned_cols=60 Identities=18% Similarity=0.273 Sum_probs=47.6
Q ss_pred CCcEEEEecCCCCCCChhHHHHHhhcCC------------------------C-ceEEEcCCCCCccccCcchHHHHHHH
Q 019314 279 EGSVHLWQGDEDRLVPVILQRYISKKLP------------------------W-IRYHEIPGSGHLIADADGMTEAIIKA 333 (343)
Q Consensus 279 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~ep~~~~~~i~~ 333 (343)
..+||+..|+.|.+||.-..+.+.+.+. + .+++++-+|||+++.+|+...+++..
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~qP~~al~m~~~ 426 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 426 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCCCHHHHHHHHHH
Confidence 3579999999999999877666554431 1 45677889999997569999999999
Q ss_pred HHccc
Q 019314 334 LLLGE 338 (343)
Q Consensus 334 fl~~~ 338 (343)
|+...
T Consensus 427 Fi~~~ 431 (433)
T PLN03016 427 WISGQ 431 (433)
T ss_pred HHcCC
Confidence 99764
No 165
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.28 E-value=3.4e-06 Score=66.65 Aligned_cols=88 Identities=16% Similarity=0.115 Sum_probs=48.1
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhH-cCcEEEEecCCCcccCCCCCCccHHHHHHH----HHHHHHHhCCC-
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDE-LGIYIVSFDRPGYGESDPDPKRTRKSLALD----IEELADQLGLG- 128 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~d----i~~~l~~l~~~- 128 (343)
.-.|||+||+.++... |..+. ..+... ..+.-..+...++.........+++..++. |.+.++.....
T Consensus 4 ~hLvV~vHGL~G~~~d-----~~~~~-~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~ 77 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPAD-----MRYLK-NHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKI 77 (217)
T ss_pred CEEEEEeCCCCCCHHH-----HHHHH-HHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhcccccccc
Confidence 4579999999999888 66654 555441 011111112222211111112244444444 44444433331
Q ss_pred CeEEEEEecccHHHHHHHHH
Q 019314 129 SKFYVVGFSMGGQVVWSCLK 148 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~ 148 (343)
.++++|||||||.++-.+..
T Consensus 78 ~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccceEEEecccHHHHHHHHH
Confidence 48999999999999865554
No 166
>COG3150 Predicted esterase [General function prediction only]
Probab=98.26 E-value=6.9e-06 Score=59.40 Aligned_cols=90 Identities=20% Similarity=0.241 Sum_probs=68.7
Q ss_pred EEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEec
Q 019314 58 HLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFS 137 (343)
Q Consensus 58 vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S 137 (343)
||+|||+..|... .+.+.+..+ +..|.|-.+.+.+....+....++.+..++..++- +...|+|.|
T Consensus 2 ilYlHGFnSSP~s-----hka~l~~q~--------~~~~~~~i~y~~p~l~h~p~~a~~ele~~i~~~~~-~~p~ivGss 67 (191)
T COG3150 2 ILYLHGFNSSPGS-----HKAVLLLQF--------IDEDVRDIEYSTPHLPHDPQQALKELEKAVQELGD-ESPLIVGSS 67 (191)
T ss_pred eEEEecCCCCccc-----HHHHHHHHH--------HhccccceeeecCCCCCCHHHHHHHHHHHHHHcCC-CCceEEeec
Confidence 8999999999888 544331222 33455666667666677899999999999999986 579999999
Q ss_pred ccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 138 MGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 138 ~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
+||..|.+++.++. +++ |+++|..
T Consensus 68 LGGY~At~l~~~~G--ira-v~~NPav 91 (191)
T COG3150 68 LGGYYATWLGFLCG--IRA-VVFNPAV 91 (191)
T ss_pred chHHHHHHHHHHhC--Chh-hhcCCCc
Confidence 99999999999864 444 5567753
No 167
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.20 E-value=4.5e-06 Score=68.01 Aligned_cols=109 Identities=9% Similarity=-0.001 Sum_probs=65.7
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcC---cEEEEecCCCcccCC-----------CCC-C---cc-HHH
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELG---IYIVSFDRPGYGESD-----------PDP-K---RT-RKS 113 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g---~~vi~~D~~G~G~S~-----------~~~-~---~~-~~~ 113 (343)
+.-|+|+++||.......+ . ....+ ..+.++.+ .-+++++..+.+... ... . .. .+-
T Consensus 22 ~~~PvlylldG~~~~~~~~--~-~~~~~-~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (251)
T PF00756_consen 22 KPYPVLYLLDGQSGWFRNG--N-AQEAL-DRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETF 97 (251)
T ss_dssp TTEEEEEEESHTTHHHHHH--H-HHHHH-HHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHH
T ss_pred CCCEEEEEccCCccccccc--h-HHHHH-HHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCccccee
Confidence 4458999999972222210 0 11222 44444422 346666765555110 000 1 12 233
Q ss_pred HHHHHHHHHHHh-CCC-CeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 114 LALDIEELADQL-GLG-SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 114 ~~~di~~~l~~l-~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
+.++|...|+.. ... ++..|+|+||||..|+.++.+||+.+.+++.+||...
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 455666666653 331 2379999999999999999999999999999998643
No 168
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.20 E-value=2.8e-05 Score=59.14 Aligned_cols=105 Identities=17% Similarity=0.119 Sum_probs=72.2
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCC---CCeE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGL---GSKF 131 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~---~~~~ 131 (343)
+.-||||-|++..--...+ -..+. ..+.+. +|.++-+.++.+-. +....++++-++|+..++++++. ...+
T Consensus 36 ~~~vvfiGGLgdgLl~~~y--~~~L~-~~lde~-~wslVq~q~~Ssy~--G~Gt~slk~D~edl~~l~~Hi~~~~fSt~v 109 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLY--TTMLN-RYLDEN-SWSLVQPQLRSSYN--GYGTFSLKDDVEDLKCLLEHIQLCGFSTDV 109 (299)
T ss_pred EEEEEEEcccCCCcccccc--HHHHH-HHHhhc-cceeeeeecccccc--ccccccccccHHHHHHHHHHhhccCcccce
Confidence 4578999888765443221 33444 444444 89999998873210 01123778889999999998753 2489
Q ss_pred EEEEecccHHHHHHHHHH--hhcccceeEEEccccc
Q 019314 132 YVVGFSMGGQVVWSCLKY--ISHRLTGAALIAPVIN 165 (343)
Q Consensus 132 ~lvG~S~Gg~~a~~~a~~--~p~~v~~lil~~~~~~ 165 (343)
+++|||.|..=.+.|... -|..+.+.|+.+|..+
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 999999999998888732 3557888888888644
No 169
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.18 E-value=2.8e-05 Score=62.50 Aligned_cols=103 Identities=17% Similarity=0.265 Sum_probs=56.8
Q ss_pred CCCeEEEecCCCCCc---ccchhhhhhhhhhHHHHhHc--CcEEEEecCCCcccC-CCCCC--ccHHHHHHHHHHHHHHh
Q 019314 54 TSLLHLNFHLFNGCV---GSLNFTVLACLSFQEVVDEL--GIYIVSFDRPGYGES-DPDPK--RTRKSLALDIEELADQL 125 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~---~~~~~~~~~~~~~~~l~~~~--g~~vi~~D~~G~G~S-~~~~~--~~~~~~~~di~~~l~~l 125 (343)
...|||+.||++.+. .. +..+ ..+.++. |..|.+++.- -+.+ +.... ..+.++++.+.+.+...
T Consensus 4 ~~~PvViwHGmGD~~~~~~~-----m~~i--~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~ 75 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSS-----MGSI--KELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLAND 75 (279)
T ss_dssp SS--EEEE--TT--S--TTT-----HHHH--HHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-
T ss_pred CCCcEEEEEcCccccCChhH-----HHHH--HHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhC
Confidence 456899999999754 24 4444 3333332 6678888773 2211 11111 25566666666666652
Q ss_pred C-CCCeEEEEEecccHHHHHHHHHHhhc-ccceeEEEcccc
Q 019314 126 G-LGSKFYVVGFSMGGQVVWSCLKYISH-RLTGAALIAPVI 164 (343)
Q Consensus 126 ~-~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~lil~~~~~ 164 (343)
. +..-+++||+|.||.++-.++.+.|+ .|..+|.+++..
T Consensus 76 p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 76 PELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred hhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 1 22479999999999999999999876 699999998753
No 170
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.17 E-value=3.5e-05 Score=59.55 Aligned_cols=79 Identities=22% Similarity=0.227 Sum_probs=52.6
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcE-EEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIY-IVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYV 133 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~l 133 (343)
+..|||..|++++... +..+. +.. ++. ++++|+|-.- + |. +..+. +.+.|
T Consensus 11 ~~LilfF~GWg~d~~~-----f~hL~---~~~--~~D~l~~yDYr~l~---------~-----d~----~~~~y-~~i~l 61 (213)
T PF04301_consen 11 KELILFFAGWGMDPSP-----FSHLI---LPE--NYDVLICYDYRDLD---------F-----DF----DLSGY-REIYL 61 (213)
T ss_pred CeEEEEEecCCCChHH-----hhhcc---CCC--CccEEEEecCcccc---------c-----cc----ccccC-ceEEE
Confidence 5689999999999988 44332 112 343 5678887321 1 11 11234 79999
Q ss_pred EEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 134 VGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 134 vG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
||+|||-.+|..+.... .++..|.+++..
T Consensus 62 vAWSmGVw~A~~~l~~~--~~~~aiAINGT~ 90 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGI--PFKRAIAINGTP 90 (213)
T ss_pred EEEeHHHHHHHHHhccC--CcceeEEEECCC
Confidence 99999999998876554 367777787753
No 171
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.17 E-value=2.6e-05 Score=58.80 Aligned_cols=106 Identities=16% Similarity=0.169 Sum_probs=70.9
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC----------C-------------ccH
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP----------K-------------RTR 111 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~----------~-------------~~~ 111 (343)
-|+|.++.|+.++.+.+-. +.- |+..+.+.|+.|+.||-.-.|..-... + +.+
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~---Ksg-~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrM 119 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIE---KSG-FQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRM 119 (283)
T ss_pred CceEEEecCCcccchhhHh---hhh-HHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhH
Confidence 5899999999988877221 122 366677779999999975444321100 0 111
Q ss_pred -HHHHHHHHHHHHH----hCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 112 -KSLALDIEELADQ----LGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 112 -~~~~~di~~~l~~----l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
+-.++.+-++++. ++. .++.|.||||||.=|+-.+++.|.+.+++-..+|..+
T Consensus 120 YdYv~kELp~~l~~~~~pld~-~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 120 YDYVVKELPQLLNSANVPLDP-LKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHHHHHHhccccccccc-hhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 1223444455542 234 5799999999999999999999999888887777543
No 172
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.14 E-value=1.8e-05 Score=65.02 Aligned_cols=106 Identities=22% Similarity=0.321 Sum_probs=67.9
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcC--cEEEEecCCCcccCCC-----C-CCccHHHHHHHHHHHHHH
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELG--IYIVSFDRPGYGESDP-----D-PKRTRKSLALDIEELADQ 124 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g--~~vi~~D~~G~G~S~~-----~-~~~~~~~~~~di~~~l~~ 124 (343)
..+..+||+||+..+-.. ..+ .. .......| ...+.+-||..|.--. . ..++-.++...|..+.+.
T Consensus 114 ~~k~vlvFvHGfNntf~d---av~-R~--aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~ 187 (377)
T COG4782 114 SAKTVLVFVHGFNNTFED---AVY-RT--AQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATD 187 (377)
T ss_pred CCCeEEEEEcccCCchhH---HHH-HH--HHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhC
Confidence 457899999999877555 111 11 23333333 4688899997765321 1 112444444444444444
Q ss_pred hCCCCeEEEEEecccHHHHHHHHHH--------hhcccceeEEEccccc
Q 019314 125 LGLGSKFYVVGFSMGGQVVWSCLKY--------ISHRLTGAALIAPVIN 165 (343)
Q Consensus 125 l~~~~~~~lvG~S~Gg~~a~~~a~~--------~p~~v~~lil~~~~~~ 165 (343)
... ++++|++||||..+++....+ .+.+++-+|+.+|-++
T Consensus 188 ~~~-~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 188 KPV-KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred CCC-ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 456 799999999999999887754 2457889999988643
No 173
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.13 E-value=2.1e-05 Score=70.65 Aligned_cols=103 Identities=14% Similarity=0.140 Sum_probs=64.6
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHh--------H-------cCcEEEEecCCCcccCCCCCCccHHHHHHH
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVD--------E-------LGIYIVSFDRPGYGESDPDPKRTRKSLALD 117 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~--------~-------~g~~vi~~D~~G~G~S~~~~~~~~~~~~~d 117 (343)
.++-||+||+|..|+..+ -+.++ ..... + ..|+.++.|+=+ +-..-.+.++.++++-
T Consensus 87 lsGIPVLFIPGNAGSyKQ-----vRSiA-S~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE--e~tAm~G~~l~dQtEY 158 (973)
T KOG3724|consen 87 LSGIPVLFIPGNAGSYKQ-----VRSIA-SVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE--EFTAMHGHILLDQTEY 158 (973)
T ss_pred CCCceEEEecCCCCchHH-----HHHHH-HHHhhhhcCCchhhhhcccCccccceEEEcccc--hhhhhccHhHHHHHHH
Confidence 457899999999999888 77765 44332 0 035667777632 1111122467777776
Q ss_pred HHHHHHHh-----C-------CCCeEEEEEecccHHHHHHHHHH---hhcccceeEEEccc
Q 019314 118 IEELADQL-----G-------LGSKFYVVGFSMGGQVVWSCLKY---ISHRLTGAALIAPV 163 (343)
Q Consensus 118 i~~~l~~l-----~-------~~~~~~lvG~S~Gg~~a~~~a~~---~p~~v~~lil~~~~ 163 (343)
+.+.|+.. + ..+.++++||||||.+|...+.. .++.|+-++..++.
T Consensus 159 V~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 159 VNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred HHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 66666543 2 11459999999999999877653 23346666666553
No 174
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.11 E-value=2.5e-05 Score=67.46 Aligned_cols=79 Identities=19% Similarity=0.275 Sum_probs=55.9
Q ss_pred hhhhhhHHHHhHcCcE------EEEecCCCcccCCCCCCccHHHHHHHHHHHHHHh---CCCCeEEEEEecccHHHHHHH
Q 019314 76 LACLSFQEVVDELGIY------IVSFDRPGYGESDPDPKRTRKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSC 146 (343)
Q Consensus 76 ~~~~~~~~l~~~~g~~------vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~~a~~~ 146 (343)
|..++ +.|.+. ||. ..-+|+|---. ..+++...+...++.. . +++++||||||||.++..+
T Consensus 67 ~~~li-~~L~~~-GY~~~~~l~~~pYDWR~~~~-------~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 67 FAKLI-ENLEKL-GYDRGKDLFAAPYDWRLSPA-------ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred HHHHH-HHHHhc-CcccCCEEEEEeechhhchh-------hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHH
Confidence 88888 888753 764 22378873211 3345555555555543 3 3799999999999999999
Q ss_pred HHHhhc------ccceeEEEcccc
Q 019314 147 LKYISH------RLTGAALIAPVI 164 (343)
Q Consensus 147 a~~~p~------~v~~lil~~~~~ 164 (343)
....+. .|+++|.+++..
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCC
Confidence 987643 599999999863
No 175
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.09 E-value=0.0011 Score=57.77 Aligned_cols=114 Identities=23% Similarity=0.206 Sum_probs=74.9
Q ss_pred CccEEEEEeccC---CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcC---------------------cEEEEe
Q 019314 40 SHQYLKFLNSIE---YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELG---------------------IYIVSF 95 (343)
Q Consensus 40 ~~~~l~y~~~g~---~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g---------------------~~vi~~ 95 (343)
.+..|+|.-... +..+|.||.+.|+++++.. - .+..+.| -.++-+
T Consensus 55 ~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl-----~------G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfL 123 (454)
T KOG1282|consen 55 EGRQLFYWFFESENNPETDPLVLWLNGGPGCSSL-----G------GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFL 123 (454)
T ss_pred CCceEEEEEEEccCCCCCCCEEEEeCCCCCccch-----h------hhhhhcCCeEEcCCCCcceeCCccccccccEEEE
Confidence 578888854322 3458999999999999876 1 1111111 257778
Q ss_pred cCC-CcccCCCCCC----ccHHHHHHHHHHHHHHh-------CCCCeEEEEEecccHHHHHHHHHH----hh------cc
Q 019314 96 DRP-GYGESDPDPK----RTRKSLALDIEELADQL-------GLGSKFYVVGFSMGGQVVWSCLKY----IS------HR 153 (343)
Q Consensus 96 D~~-G~G~S~~~~~----~~~~~~~~di~~~l~~l-------~~~~~~~lvG~S~Gg~~a~~~a~~----~p------~~ 153 (343)
|.| |.|.|-.... .+-+..++|+..++... .- .+++|.|-|++|+..-.+|.. .. -.
T Consensus 124 d~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~-~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iN 202 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKS-NDFYIAGESYAGHYVPALAQEILKGNKKCCKPNIN 202 (454)
T ss_pred ecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcC-CCeEEecccccceehHHHHHHHHhccccccCCccc
Confidence 877 7777742221 24455667766666432 23 699999999999888777753 11 14
Q ss_pred cceeEEEccccc
Q 019314 154 LTGAALIAPVIN 165 (343)
Q Consensus 154 v~~lil~~~~~~ 165 (343)
++|+++-+|..+
T Consensus 203 LkG~~IGNg~td 214 (454)
T KOG1282|consen 203 LKGYAIGNGLTD 214 (454)
T ss_pred ceEEEecCcccC
Confidence 788888888765
No 176
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.04 E-value=5.7e-05 Score=65.56 Aligned_cols=104 Identities=9% Similarity=-0.070 Sum_probs=64.3
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHc---CcEEEEecCCCc-ccCCC-CCC-ccHHHHHHHHHHHHHHh--
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDEL---GIYIVSFDRPGY-GESDP-DPK-RTRKSLALDIEELADQL-- 125 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~---g~~vi~~D~~G~-G~S~~-~~~-~~~~~~~~di~~~l~~l-- 125 (343)
..|+|+++||..-.... . ...++ +.+.++. ..-++.+|-.+. .++.. +.. .-.+.+++++.-.++..
T Consensus 208 ~~PvlyllDG~~w~~~~---~-~~~~l-d~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~ 282 (411)
T PRK10439 208 ERPLAILLDGQFWAESM---P-VWPAL-DSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAP 282 (411)
T ss_pred CCCEEEEEECHHhhhcC---C-HHHHH-HHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCC
Confidence 45889999995422221 0 11232 5555442 134677775321 11110 111 12333456666666653
Q ss_pred ---CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 126 ---GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 126 ---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
+. ++.+|.|+||||..|+.++.++|+++.+++.+++.
T Consensus 283 ~~~d~-~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 283 FSDDA-DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred CCCCc-cceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 22 57899999999999999999999999999999986
No 177
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.95 E-value=4.1e-05 Score=69.00 Aligned_cols=108 Identities=16% Similarity=0.066 Sum_probs=66.3
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcC-cEEEEecCC-C---cccCCC---CCCccHHHHHHHHH---HH
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELG-IYIVSFDRP-G---YGESDP---DPKRTRKSLALDIE---EL 121 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g-~~vi~~D~~-G---~G~S~~---~~~~~~~~~~~di~---~~ 121 (343)
+..|+||+|||.+.....-.. + .. ..+..+.+ +.|+.+++| | +..+.. +....+.|+..-+. +-
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~--~--~~-~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~ 167 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSL--Y--PG-DGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDN 167 (493)
T ss_pred CCCCEEEEEcCCccccCCCCC--C--Ch-HHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 346999999997633222000 1 11 45555434 899999999 3 332221 11223444444333 33
Q ss_pred HHHhCCC-CeEEEEEecccHHHHHHHHHH--hhcccceeEEEccccc
Q 019314 122 ADQLGLG-SKFYVVGFSMGGQVVWSCLKY--ISHRLTGAALIAPVIN 165 (343)
Q Consensus 122 l~~l~~~-~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lil~~~~~~ 165 (343)
++..+.+ ++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 168 i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 168 IAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 3444322 699999999999999888775 3446999999988654
No 178
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.94 E-value=8.9e-05 Score=61.88 Aligned_cols=107 Identities=21% Similarity=0.124 Sum_probs=78.2
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC----------c-cHHHHHHHHHHHHH
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK----------R-TRKSLALDIEELAD 123 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~----------~-~~~~~~~di~~~l~ 123 (343)
+.+|+|.-|.-++-+.+-.. ..++ -.++.+++--+|..++|-+|+|.+-.. + +.++-.+|.+.++.
T Consensus 80 ~gPIffYtGNEGdie~Fa~n--tGFm-~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANN--TGFM-WDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred CCceEEEeCCcccHHHHHhc--cchH-HhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 36899999988876651111 1232 445555567799999999999975221 1 56677778888887
Q ss_pred HhCC-----CCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 124 QLGL-----GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 124 ~l~~-----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
.++. ..+++.+|-|+||++|..+=.+||+.|.|.+..+..+
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 7732 2689999999999999999999999888877766544
No 179
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.86 E-value=0.0017 Score=54.67 Aligned_cols=59 Identities=19% Similarity=0.282 Sum_probs=46.5
Q ss_pred CcEEEEecCCCCCCChhHHHHHhhcCC------------------------C-ceEEEcCCCCCccccCcchHHHHHHHH
Q 019314 280 GSVHLWQGDEDRLVPVILQRYISKKLP------------------------W-IRYHEIPGSGHLIADADGMTEAIIKAL 334 (343)
Q Consensus 280 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~ep~~~~~~i~~f 334 (343)
.+||+..|+.|.+|+.-..+.+.+.+. + .++.++.+|||+++.+|+...+++..|
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~f 313 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQRW 313 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHHH
Confidence 679999999999999766665555432 2 456677799999975699999999999
Q ss_pred Hccc
Q 019314 335 LLGE 338 (343)
Q Consensus 335 l~~~ 338 (343)
+...
T Consensus 314 i~~~ 317 (319)
T PLN02213 314 ISGQ 317 (319)
T ss_pred HcCC
Confidence 9764
No 180
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.82 E-value=0.00035 Score=59.02 Aligned_cols=59 Identities=14% Similarity=0.132 Sum_probs=47.6
Q ss_pred CCCCCcEEEEecCCCCCCChhHHHHHhhcCCC-ceEEEcCCCCCccccCcchHHHHHHHHHc
Q 019314 276 PNSEGSVHLWQGDEDRLVPVILQRYISKKLPW-IRYHEIPGSGHLIADADGMTEAIIKALLL 336 (343)
Q Consensus 276 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ep~~~~~~i~~fl~ 336 (343)
.+++.|.++|.|..|+...+.....+...+|+ ..++.+|+++|.... ..+.+.+..|+.
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--~~~~~~l~~f~~ 318 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--SDVVQSLRAFYN 318 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch--HHHHHHHHHHHH
Confidence 45577799999999999999999999999986 468999999999877 444555555554
No 181
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.77 E-value=0.00075 Score=56.27 Aligned_cols=63 Identities=17% Similarity=0.172 Sum_probs=48.2
Q ss_pred CCCCC-CcEEEEecCCCCCCChhHHHHHhhcCCC--ceEEEcCCCCCccccC-cc---hHHHHHHHHHcc
Q 019314 275 FPNSE-GSVHLWQGDEDRLVPVILQRYISKKLPW--IRYHEIPGSGHLIADA-DG---MTEAIIKALLLG 337 (343)
Q Consensus 275 ~~~i~-~Pvl~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e-p~---~~~~~i~~fl~~ 337 (343)
+.+++ +|+|+++|.+|..+|......+.+..+. .+...+++++|..... .. +....+.+|+.+
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 33444 6899999999999999998888877765 5788888999998863 33 566666677654
No 182
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.74 E-value=0.00035 Score=61.32 Aligned_cols=125 Identities=15% Similarity=0.109 Sum_probs=81.6
Q ss_pred eeeecCccEEEEEeccC--C-CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCC------
Q 019314 35 LLQQTSHQYLKFLNSIE--Y-PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDP------ 105 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~--~-~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~------ 105 (343)
..+..||.++.|..-+. . ...|++|+--|...-+.. +.|.+.. ....++ |...+..+.||-|+-.+
T Consensus 398 ~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vslt---P~fs~~~-~~WLer-Gg~~v~ANIRGGGEfGp~WH~Aa 472 (648)
T COG1505 398 FATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLT---PRFSGSR-KLWLER-GGVFVLANIRGGGEFGPEWHQAG 472 (648)
T ss_pred EEEcCCCccccEEEEecCCcCCCCceEEEeccccccccC---Cccchhh-HHHHhc-CCeEEEEecccCCccCHHHHHHH
Confidence 34567899999977642 1 246776665555444333 2244554 556666 77788889999876542
Q ss_pred ---CCCccHHHHHHHHHHHHHHhCC--CCeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 106 ---DPKRTRKSLALDIEELADQLGL--GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 106 ---~~~~~~~~~~~di~~~l~~l~~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
.....++|+++-.+++++. ++ .+++.+.|-|-||.+.-....++||.+.++|+--|..+
T Consensus 473 ~k~nrq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllD 536 (648)
T COG1505 473 MKENKQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLD 536 (648)
T ss_pred hhhcchhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhh
Confidence 1112444444444444443 22 15788999999999999888999999998888777543
No 183
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.64 E-value=0.0007 Score=58.24 Aligned_cols=111 Identities=14% Similarity=0.121 Sum_probs=84.0
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC--------ccHHHHHHHHHHHHHH
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK--------RTRKSLALDIEELADQ 124 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--------~~~~~~~~di~~~l~~ 124 (343)
+++|.-|+|-|=+.....|-- .....|..+++++|-.|+..++|-+|.|.+..+ .+..+..+|++.+|++
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~--~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVG--NENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred CCCceEEEEcCCCCCCCCccc--cCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Confidence 457777888776655544100 112224678888899999999999999975443 1678888999999998
Q ss_pred hCC----C--CeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 125 LGL----G--SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 125 l~~----~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
++. . .|.+.+|-|+-|.++..+=++||+.+.+.|.-++.+.
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 742 1 3899999999999999999999999998888776543
No 184
>COG0627 Predicted esterase [General function prediction only]
Probab=97.56 E-value=0.0004 Score=57.69 Aligned_cols=109 Identities=17% Similarity=0.136 Sum_probs=69.1
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCC--------------CcccC---CCCC-----C-cc
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRP--------------GYGES---DPDP-----K-RT 110 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~--------------G~G~S---~~~~-----~-~~ 110 (343)
.-|+++++||..++...+. -..- ++...+..|..++++|-. |-+.| +... . +.
T Consensus 53 ~ipV~~~l~G~t~~~~~~~---~~~g-~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q 128 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVY---LLDG-LRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQ 128 (316)
T ss_pred CCCEEEEeCCCCCCCCceE---eccc-hhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccc
Confidence 4578899999988754411 1111 256666667777776333 32222 1101 1 33
Q ss_pred HHH-HHHHHHHHHH-HhCCCC---eEEEEEecccHHHHHHHHHHhhcccceeEEEcccccc
Q 019314 111 RKS-LALDIEELAD-QLGLGS---KFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY 166 (343)
Q Consensus 111 ~~~-~~~di~~~l~-~l~~~~---~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 166 (343)
.++ +.+++-+.++ +...+. +..++||||||.=|+.+|+++|+++..+...+|....
T Consensus 129 ~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 129 WETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred hhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 333 3445554444 333222 6899999999999999999999999999999998653
No 185
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.54 E-value=0.00062 Score=53.69 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=66.4
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcc--cCCCCCCccHHHHHHHHHHHHHHh-CCCCeEE
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYG--ESDPDPKRTRKSLALDIEELADQL-GLGSKFY 132 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G--~S~~~~~~~~~~~~~di~~~l~~l-~~~~~~~ 132 (343)
-|+|++||++.+..... ...+. +.+.+.-|..|++.|. |-| .|.- ..+.++++...+.++.. .+.+-+.
T Consensus 24 ~P~ii~HGigd~c~~~~---~~~~~-q~l~~~~g~~v~~lei-g~g~~~s~l---~pl~~Qv~~~ce~v~~m~~lsqGyn 95 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLS---MANLT-QLLEELPGSPVYCLEI-GDGIKDSSL---MPLWEQVDVACEKVKQMPELSQGYN 95 (296)
T ss_pred CCEEEEeccCcccccch---HHHHH-HHHHhCCCCeeEEEEe-cCCcchhhh---ccHHHHHHHHHHHHhcchhccCceE
Confidence 57999999997766522 44443 4444433788999987 444 2211 24455555555444422 1235799
Q ss_pred EEEecccHHHHHHHHHHhhc-ccceeEEEccc
Q 019314 133 VVGFSMGGQVVWSCLKYISH-RLTGAALIAPV 163 (343)
Q Consensus 133 lvG~S~Gg~~a~~~a~~~p~-~v~~lil~~~~ 163 (343)
++|.|.||.++-.++..-++ .|..+|.+++.
T Consensus 96 ivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 96 IVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 99999999999999887554 59999998875
No 186
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.44 E-value=0.0085 Score=53.70 Aligned_cols=125 Identities=14% Similarity=0.098 Sum_probs=81.7
Q ss_pred eeecCccEEE----EEec-cCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCC-----
Q 019314 36 LQQTSHQYLK----FLNS-IEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDP----- 105 (343)
Q Consensus 36 ~~~~~~~~l~----y~~~-g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~----- 105 (343)
++..||.++. |+.- .-+.++|.+|..-|.-+.+..-+ |.... -.|.++ ||--....-||=|+-..
T Consensus 424 a~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~---Fs~~~-lSLlDR-GfiyAIAHVRGGgelG~~WYe~ 498 (682)
T COG1770 424 ATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPS---FSIAR-LSLLDR-GFVYAIAHVRGGGELGRAWYED 498 (682)
T ss_pred EEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcC---cccce-eeeecC-ceEEEEEEeecccccChHHHHh
Confidence 3446776644 3322 11234677777666555443311 33332 356665 87655667787664421
Q ss_pred ----CCCccHHHHHHHHHHHHHHh-CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 106 ----DPKRTRKSLALDIEELADQL-GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 106 ----~~~~~~~~~~~di~~~l~~l-~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
....++.|+.+....+++.= .-.+.++++|-|.||+++...+...|+.++++|+-.|.++
T Consensus 499 GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 499 GKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred hhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 12358888888777777652 2226899999999999999999999999999999988765
No 187
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.42 E-value=0.002 Score=54.65 Aligned_cols=35 Identities=20% Similarity=0.218 Sum_probs=31.2
Q ss_pred eEEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 130 KFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 130 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
|++++|+|.||.+|...|.-.|..+++++=-++..
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 89999999999999999999999998888766653
No 188
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.39 E-value=0.0087 Score=45.22 Aligned_cols=115 Identities=16% Similarity=0.100 Sum_probs=67.5
Q ss_pred eccC-CCCCCeEEEecCCCCCcccchhhhh---hhhhhHHHHh---Hc--CcEEEEecCCCcccC-----CCCCCccHHH
Q 019314 48 NSIE-YPTSLLHLNFHLFNGCVGSLNFTVL---ACLSFQEVVD---EL--GIYIVSFDRPGYGES-----DPDPKRTRKS 113 (343)
Q Consensus 48 ~~g~-~~~~~~vv~ihG~~~~~~~~~~~~~---~~~~~~~l~~---~~--g~~vi~~D~~G~G~S-----~~~~~~~~~~ 113 (343)
..|+ .....+.++++|.+.+......... ..+. ..+.+ +. +=.|-++-|.||--- +......-++
T Consensus 11 a~GD~d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ 89 (177)
T PF06259_consen 11 AVGDPDTADHVAVLVPGTGTTLDSFLGGMDDEARALR-AAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARA 89 (177)
T ss_pred EECCcCCcCeeEEEcCCCCCCcccccchhHHHHHHHH-HHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHH
Confidence 3454 3345688999999877665211100 0111 11111 11 224555555554322 1111123455
Q ss_pred HHHHHHHHHHHhC----CCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 114 LALDIEELADQLG----LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 114 ~~~di~~~l~~l~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
-+.++..+++.|. .+..+.++|||+|+.++-..+...+..++.++++++.
T Consensus 90 ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 90 GAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 5667777777663 2358999999999999988887767789999999763
No 189
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.39 E-value=0.004 Score=50.43 Aligned_cols=115 Identities=11% Similarity=-0.041 Sum_probs=64.7
Q ss_pred EEEEEeccC--CCCCCeEEEecCCC--CCcccchhhhhhhhhhHHHHhHc---CcEEEEecCCCc---ccCCCCCCccHH
Q 019314 43 YLKFLNSIE--YPTSLLHLNFHLFN--GCVGSLNFTVLACLSFQEVVDEL---GIYIVSFDRPGY---GESDPDPKRTRK 112 (343)
Q Consensus 43 ~l~y~~~g~--~~~~~~vv~ihG~~--~~~~~~~~~~~~~~~~~~l~~~~---g~~vi~~D~~G~---G~S~~~~~~~~~ 112 (343)
.+-|...|. ...-|.+++.||-. .+... ++.+ +.+..+. .--++.+|.--. .+.-........
T Consensus 84 ~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i-----~~~~--dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~ 156 (299)
T COG2382 84 RVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRI-----PRIL--DSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWR 156 (299)
T ss_pred EEEEeCCCCCccccccEEEEeccHHHHhcCCh-----HHHH--HHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHH
Confidence 344444443 23468899999743 22222 3332 5665542 234555554210 000011111333
Q ss_pred HHHHHHHHHHHHh----CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 113 SLALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 113 ~~~~di~~~l~~l----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
.+++++.=.++.- .....-+|.|.|+||.+++..+.+||+++-.++.-||..
T Consensus 157 ~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 157 FLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred HHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 3444444344332 112467899999999999999999999999999999863
No 190
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.31 E-value=0.0033 Score=57.42 Aligned_cols=108 Identities=15% Similarity=0.037 Sum_probs=60.6
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCC----CcccCC---CC-CCccHHHHHHHHHHHHHHh-
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRP----GYGESD---PD-PKRTRKSLALDIEELADQL- 125 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~G~S~---~~-~~~~~~~~~~di~~~l~~l- 125 (343)
-|++|+|||.+.....-+...+ .. ..+....+.-||.+.+| |+-.+. .+ ....+.|+...|.=+-+..
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~-~~--~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~ 201 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPY-DG--ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIA 201 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGG-HT--HHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGG
T ss_pred cceEEEeecccccCCCcccccc-cc--cccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhh
Confidence 5999999998743332100001 11 34444458999999998 332222 12 2345666655544444433
Q ss_pred --CC-CCeEEEEEecccHHHHHHHHHHh--hcccceeEEEccccc
Q 019314 126 --GL-GSKFYVVGFSMGGQVVWSCLKYI--SHRLTGAALIAPVIN 165 (343)
Q Consensus 126 --~~-~~~~~lvG~S~Gg~~a~~~a~~~--p~~v~~lil~~~~~~ 165 (343)
|- .++|.|+|+|.||..+...+..- ...++++|+.|+...
T Consensus 202 ~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 202 AFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 31 16899999999999888777652 236999999998643
No 191
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.27 E-value=0.0011 Score=49.43 Aligned_cols=50 Identities=26% Similarity=0.175 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHh----CCCCeEEEEEecccHHHHHHHHHHhhc----ccceeEEEccc
Q 019314 113 SLALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISH----RLTGAALIAPV 163 (343)
Q Consensus 113 ~~~~di~~~l~~l----~~~~~~~lvG~S~Gg~~a~~~a~~~p~----~v~~lil~~~~ 163 (343)
.+.+.+...++.. .. .+++++|||+||.+|..++...+. ++..++..++.
T Consensus 9 ~~~~~i~~~~~~~~~~~p~-~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 9 SLANLVLPLLKSALAQYPD-YKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHCCC-CeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 3444444444443 44 699999999999999999988765 46667777664
No 192
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.25 E-value=0.0047 Score=47.03 Aligned_cols=103 Identities=16% Similarity=0.182 Sum_probs=60.8
Q ss_pred CCeEEEecCCCCCcccchhhhhh---------------hhhhHHHHhHcCcEEEEecCCC---cccCCCCCCc---cHHH
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLA---------------CLSFQEVVDELGIYIVSFDRPG---YGESDPDPKR---TRKS 113 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~---------------~~~~~~l~~~~g~~vi~~D~~G---~G~S~~~~~~---~~~~ 113 (343)
...+|+|||.|.-... + |. +.+ .+-.+ .||.|++.+.-- +-++...+.. +..+
T Consensus 101 ~kLlVLIHGSGvVrAG---Q-WARrLIIN~~Ld~GTQiPyi-~rAv~-~Gygviv~N~N~~~kfye~k~np~kyirt~ve 174 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAG---Q-WARRLIINEDLDSGTQIPYI-KRAVA-EGYGVIVLNPNRERKFYEKKRNPQKYIRTPVE 174 (297)
T ss_pred cceEEEEecCceEecc---h-HhhhhhhccccccCCcChHH-HHHHH-cCCcEEEeCCchhhhhhhcccCcchhccchHH
Confidence 4579999999843222 0 32 122 22222 289999876431 2222222221 2222
Q ss_pred HHHHH-HHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhc--ccceeEEEcccc
Q 019314 114 LALDI-EELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALIAPVI 164 (343)
Q Consensus 114 ~~~di-~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~ 164 (343)
.+.-+ ..++..... +.+.++.||+||...+.+..++|+ +|.++.+.++..
T Consensus 175 h~~yvw~~~v~pa~~-~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 175 HAKYVWKNIVLPAKA-ESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHHHHHhcccCc-ceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 22221 223333345 789999999999999999999986 688888877763
No 193
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.24 E-value=0.022 Score=45.84 Aligned_cols=102 Identities=11% Similarity=-0.042 Sum_probs=69.6
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-CccHHHHHHHHHHHHHHhCCCCeEEE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLALDIEELADQLGLGSKFYV 133 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~di~~~l~~l~~~~~~~l 133 (343)
.|.|+++-...++... ..+..+ +.|... ..|+.-||-..-.-+... ..+++|+.+-+.++++.+|. ..++
T Consensus 103 dPkvLivapmsGH~aT----LLR~TV-~alLp~--~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp--~~hv 173 (415)
T COG4553 103 DPKVLIVAPMSGHYAT----LLRGTV-EALLPY--HDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGP--DAHV 173 (415)
T ss_pred CCeEEEEecccccHHH----HHHHHH-HHhccc--cceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCC--CCcE
Confidence 4567777666554433 155555 667664 468999986443332222 35899999999999999986 5889
Q ss_pred EEecccHHHH-----HHHHHHhhcccceeEEEccccc
Q 019314 134 VGFSMGGQVV-----WSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 134 vG~S~Gg~~a-----~~~a~~~p~~v~~lil~~~~~~ 165 (343)
++.|.=+.-. ++.+...|..-.+++++++.++
T Consensus 174 ~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 174 MAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred EEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 9988876443 3334445667889999998765
No 194
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.17 E-value=0.0032 Score=54.49 Aligned_cols=106 Identities=13% Similarity=0.040 Sum_probs=65.9
Q ss_pred CCCCeEEEecCCCC---CcccchhhhhhhhhhHHHHhHcCcEEEEecCCC--cccCC---CC--C----CccHHHHHHH-
Q 019314 53 PTSLLHLNFHLFNG---CVGSLNFTVLACLSFQEVVDELGIYIVSFDRPG--YGESD---PD--P----KRTRKSLALD- 117 (343)
Q Consensus 53 ~~~~~vv~ihG~~~---~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G--~G~S~---~~--~----~~~~~~~~~d- 117 (343)
++.|++|+|||.+. +...- +..- ..|+++.++-|+.+++|= .|.-+ -. . ...+.|++.-
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~----~ydg--s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilAL 165 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEP----LYDG--SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILAL 165 (491)
T ss_pred CCCcEEEEEeccccccCCCccc----ccCh--HHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHH
Confidence 34699999999863 22221 1121 577777348888998872 22111 00 1 1244444433
Q ss_pred --HHHHHHHhCCC-CeEEEEEecccHHHHHHHHHHhhc---ccceeEEEccccc
Q 019314 118 --IEELADQLGLG-SKFYVVGFSMGGQVVWSCLKYISH---RLTGAALIAPVIN 165 (343)
Q Consensus 118 --i~~~l~~l~~~-~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~ 165 (343)
+.+-|++.|-+ ++|.|+|+|.||+.++.+.+. |. .+.++|+.|+...
T Consensus 166 kWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 166 KWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 34455555432 689999999999998877764 54 6888899988643
No 195
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.13 E-value=0.0013 Score=58.34 Aligned_cols=83 Identities=17% Similarity=0.177 Sum_probs=52.8
Q ss_pred hhhhhhHHHHhHcCcE-----EEEecCCCcccCCCCCCccHHHHHHHHHHHHHHh---CCCCeEEEEEecccHHHHHHHH
Q 019314 76 LACLSFQEVVDELGIY-----IVSFDRPGYGESDPDPKRTRKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCL 147 (343)
Q Consensus 76 ~~~~~~~~l~~~~g~~-----vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~~a~~~a 147 (343)
|..++ +.|.+. ||. ...+|+|=.. .....-+++-..+...|+.. +-++|++|+||||||.+++.+.
T Consensus 158 w~kLI-e~L~~i-GY~~~nL~gAPYDWRls~----~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 158 WAVLI-ANLARI-GYEEKNMYMAAYDWRLSF----QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred HHHHH-HHHHHc-CCCCCceeecccccccCc----cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 78887 888865 874 3445555211 00112244445555555533 2237999999999999999987
Q ss_pred HHh-----------h----cccceeEEEcccc
Q 019314 148 KYI-----------S----HRLTGAALIAPVI 164 (343)
Q Consensus 148 ~~~-----------p----~~v~~lil~~~~~ 164 (343)
..- + ..|++.|.+++..
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheeccccc
Confidence 632 1 2589999999864
No 196
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.11 E-value=0.0046 Score=55.02 Aligned_cols=106 Identities=18% Similarity=0.139 Sum_probs=72.8
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCC---------CCCccHHHHHHHHHHHHHH
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDP---------DPKRTRKSLALDIEELADQ 124 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~---------~~~~~~~~~~~di~~~l~~ 124 (343)
+.|.+|..+|.-+-+-. .. |+.-- ..|.+ +|+-....|.||-|+-.. ....+++|+..-...+++.
T Consensus 469 ~~P~LLygYGay~isl~--p~-f~~sr-l~lld-~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~ 543 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLD--PS-FRASR-LSLLD-RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVEN 543 (712)
T ss_pred CCceEEEEecccceeec--cc-cccce-eEEEe-cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHc
Confidence 46666666655433222 22 44332 33455 488888889999775431 1124777777777777764
Q ss_pred h--CCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 125 L--GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 125 l--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
- .. ++..+.|.|.||.++..+.-++|+.+.++|+--|..+
T Consensus 544 gyt~~-~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 544 GYTQP-SKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred CCCCc-cceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 2 33 6899999999999999999999999999998888654
No 197
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.07 E-value=0.0022 Score=46.87 Aligned_cols=38 Identities=16% Similarity=0.265 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhh
Q 019314 113 SLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 113 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
...+.+..+++.... .++++.|||+||.+|..++....
T Consensus 49 ~~~~~l~~~~~~~~~-~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 49 QILDALKELVEKYPD-YSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccC-ccchhhccchHHHHHHHHHHhhh
Confidence 445556665555554 69999999999999999998754
No 198
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.06 E-value=0.03 Score=53.79 Aligned_cols=97 Identities=15% Similarity=0.223 Sum_probs=71.2
Q ss_pred CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccC--CCCCCccHHHHHHHHHHHHHHhCCCC
Q 019314 52 YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGES--DPDPKRTRKSLALDIEELADQLGLGS 129 (343)
Q Consensus 52 ~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S--~~~~~~~~~~~~~di~~~l~~l~~~~ 129 (343)
.+..|+++|+|..-+.... . ..++.+. ..|.+|.- ...+..++++.++-...-++.+....
T Consensus 2120 ~se~~~~Ffv~pIEG~tt~-----l-----~~la~rl-------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~G 2182 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTTA-----L-----ESLASRL-------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEG 2182 (2376)
T ss_pred cccCCceEEEeccccchHH-----H-----HHHHhhc-------CCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCC
Confidence 3468899999999888777 3 5555542 23444432 33445689999988888888886556
Q ss_pred eEEEEEecccHHHHHHHHHHhhc--ccceeEEEccccc
Q 019314 130 KFYVVGFSMGGQVVWSCLKYISH--RLTGAALIAPVIN 165 (343)
Q Consensus 130 ~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~~ 165 (343)
|..++|+|+|+.++..+|....+ ....+|++++.+.
T Consensus 2183 PYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2183 PYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred CeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 99999999999999999975433 4667999988643
No 199
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.01 E-value=0.00076 Score=57.73 Aligned_cols=85 Identities=20% Similarity=0.183 Sum_probs=56.8
Q ss_pred hhhhhhHHHHhHcCcE------EEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHH
Q 019314 76 LACLSFQEVVDELGIY------IVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 76 ~~~~~~~~l~~~~g~~------vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
|..++ +.+..- ||. -..+|+|=.-......+..+..+..-|+...+.-|- +|++||+||||+.+.+.+...
T Consensus 126 w~~~i-~~lv~~-GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~-kkVvlisHSMG~l~~lyFl~w 202 (473)
T KOG2369|consen 126 WHELI-ENLVGI-GYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGG-KKVVLISHSMGGLYVLYFLKW 202 (473)
T ss_pred HHHHH-HHHHhh-CcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCC-CceEEEecCCccHHHHHHHhc
Confidence 77776 776654 775 446788732111111223455555555555555565 799999999999999999988
Q ss_pred hhc--------ccceeEEEccc
Q 019314 150 ISH--------RLTGAALIAPV 163 (343)
Q Consensus 150 ~p~--------~v~~lil~~~~ 163 (343)
+++ .|++++-+++.
T Consensus 203 ~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 203 VEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred ccccchhHHHHHHHHHHccCch
Confidence 776 47777777764
No 200
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.90 E-value=0.0021 Score=51.19 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=33.8
Q ss_pred CeEEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 129 SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
++-.++|||+||.+++.....+|+.+...++++|..
T Consensus 137 ~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 137 ERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred ccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 578999999999999999999999999999999974
No 201
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.70 E-value=0.0047 Score=42.72 Aligned_cols=40 Identities=13% Similarity=0.182 Sum_probs=26.3
Q ss_pred hhheeeeecCccEEEEEecc-CCCCCCeEEEecCCCCCccc
Q 019314 31 DMMLLLQQTSHQYLKFLNSI-EYPTSLLHLNFHLFNGCVGS 70 (343)
Q Consensus 31 ~~~~~~~~~~~~~l~y~~~g-~~~~~~~vv~ihG~~~~~~~ 70 (343)
....+.+.++|.++|+.... ..++..||||+||+++|-..
T Consensus 67 ~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 67 SFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLE 107 (112)
T ss_dssp TS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGG
T ss_pred cCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHh
Confidence 44468888999999996553 34567899999999999877
No 202
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.63 E-value=0.011 Score=51.34 Aligned_cols=114 Identities=18% Similarity=0.142 Sum_probs=72.4
Q ss_pred EEEEeccC--CCCCCeEEEecCCCCCcccchhhhhhhhhhH-------------------HHHhHcCcEEEEec-CCCcc
Q 019314 44 LKFLNSIE--YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQ-------------------EVVDELGIYIVSFD-RPGYG 101 (343)
Q Consensus 44 l~y~~~g~--~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~-------------------~l~~~~g~~vi~~D-~~G~G 101 (343)
++|.-.++ +.++|.++++.|+++++.. |-.+. + .+.. .-.++.+| .-|.|
T Consensus 88 ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-----~g~l~-elGP~rI~~~~~P~~~~NP~SW~~--~adLvFiDqPvGTG 159 (498)
T COG2939 88 FFYTFESPNDPANRPVIFWLNGGPGCSSV-----TGLLG-ELGPKRIQSGTSPSYPDNPGSWLD--FADLVFIDQPVGTG 159 (498)
T ss_pred EEEEecCCCCCCCCceEEEecCCCChHhh-----hhhhh-hcCCeeeeCCCCCCCCCCcccccc--CCceEEEecCcccC
Confidence 44544453 2357999999999999888 43321 0 0011 12588899 56889
Q ss_pred cCCCCC--C-ccHHHHHHHHHHHHHHh--------CCCCeEEEEEecccHHHHHHHHHHhhc---ccceeEEEccccc
Q 019314 102 ESDPDP--K-RTRKSLALDIEELADQL--------GLGSKFYVVGFSMGGQVVWSCLKYISH---RLTGAALIAPVIN 165 (343)
Q Consensus 102 ~S~~~~--~-~~~~~~~~di~~~l~~l--------~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~ 165 (343)
.|.... . .+.....+|+..+.+.. .+.++.+|+|-|+||+-+..+|..--+ ..++++++++...
T Consensus 160 fS~a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 160 FSRALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred cccccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 887421 1 25555555655555432 222599999999999999999876544 3667777666543
No 203
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.62 E-value=0.0053 Score=47.41 Aligned_cols=41 Identities=17% Similarity=0.194 Sum_probs=34.7
Q ss_pred cHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHh
Q 019314 110 TRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 110 ~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~ 150 (343)
...|..+-...+|++.+.+++++|+|||.|+.+..++...+
T Consensus 76 ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 56677777788888887768999999999999999998865
No 204
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.59 E-value=0.022 Score=47.34 Aligned_cols=61 Identities=10% Similarity=0.063 Sum_probs=46.8
Q ss_pred CCCCCCcEEEEecCCCCCCChhHHHHHhhcCCCce-EEEcCCCCCccccCcchHHHHHHHHHcc
Q 019314 275 FPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIR-YHEIPGSGHLIADADGMTEAIIKALLLG 337 (343)
Q Consensus 275 ~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~ep~~~~~~i~~fl~~ 337 (343)
.+++..|..++.|..|...+++.+.-+...+|+.+ ++.+|+..|.... ..+.+.+..|++.
T Consensus 325 ~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n--~~i~esl~~flnr 386 (507)
T COG4287 325 QLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN--QFIKESLEPFLNR 386 (507)
T ss_pred hhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH--HHHHHHHHHHHHH
Confidence 35666779999999999999999999999999764 8899999997654 3344445555443
No 205
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.48 E-value=0.0072 Score=48.41 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=25.8
Q ss_pred CeEEEEEecccHHHHHHHHHHhh-----cccceeEEEccc
Q 019314 129 SKFYVVGFSMGGQVVWSCLKYIS-----HRLTGAALIAPV 163 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~lil~~~~ 163 (343)
.++++.|||+||.+|..++.... ..+..++.-+|.
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 68999999999999999887643 235555444443
No 206
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.47 E-value=0.0051 Score=51.99 Aligned_cols=102 Identities=17% Similarity=0.154 Sum_probs=80.3
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC----ccHHHHHHHHHHHHHHhCC-
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK----RTRKSLALDIEELADQLGL- 127 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~di~~~l~~l~~- 127 (343)
.++|+|+..-|++.+..- .+.-. ..|.+ -+-+.+++|-+|.|.+.+. .++++-+.|...+++.++.
T Consensus 61 ~drPtV~~T~GY~~~~~p-----~r~Ep-t~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i 131 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSP-----RRSEP-TQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI 131 (448)
T ss_pred CCCCeEEEecCcccccCc-----cccch-hHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh
Confidence 367999999999876554 32221 45554 3688999999999987654 3899999999999988741
Q ss_pred -CCeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 128 -GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 128 -~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
+.+.+--|-|-||+.++.+=.-||+.|++.|.....
T Consensus 132 Y~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 132 YPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred ccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 358899999999999998888899999999886654
No 207
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.44 E-value=0.01 Score=46.97 Aligned_cols=45 Identities=20% Similarity=0.304 Sum_probs=33.5
Q ss_pred HHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHh----hcccceeEEEcc
Q 019314 116 LDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYI----SHRLTGAALIAP 162 (343)
Q Consensus 116 ~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~----p~~v~~lil~~~ 162 (343)
+-+..+++..+ .++.+.|||.||.+|..+|... .++|.++...++
T Consensus 73 ~yl~~~~~~~~--~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 73 AYLKKIAKKYP--GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHhCC--CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 33444444443 4699999999999999999873 457888887776
No 208
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.42 E-value=0.0062 Score=44.09 Aligned_cols=76 Identities=17% Similarity=0.147 Sum_probs=49.1
Q ss_pred eEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcE-EEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEE
Q 019314 57 LHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIY-IVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVG 135 (343)
Q Consensus 57 ~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG 135 (343)
.||+.-|++..+.. . ..|....++. ++++|+...... .++. .. +.+-+|+
T Consensus 13 LIvyFaGwgtpps~-----v-----~HLilpeN~dl~lcYDY~dl~ld-----fDfs-------------Ay-~hirlvA 63 (214)
T COG2830 13 LIVYFAGWGTPPSA-----V-----NHLILPENHDLLLCYDYQDLNLD-----FDFS-------------AY-RHIRLVA 63 (214)
T ss_pred EEEEEecCCCCHHH-----H-----hhccCCCCCcEEEEeehhhcCcc-----cchh-------------hh-hhhhhhh
Confidence 77888888887777 4 3332222443 678887633211 1111 12 4778999
Q ss_pred ecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 136 FSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 136 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
+|||-.+|-++....+ +++.+.+++.
T Consensus 64 wSMGVwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 64 WSMGVWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred hhHHHHHHHHHHhhcc--ccceeeecCC
Confidence 9999999988887654 7777888764
No 209
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.23 E-value=0.01 Score=43.62 Aligned_cols=115 Identities=11% Similarity=0.081 Sum_probs=67.9
Q ss_pred ccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhh--hhhHHHHhHc--CcEEEEecCCCcccCCC-----CCCccH
Q 019314 41 HQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLAC--LSFQEVVDEL--GIYIVSFDRPGYGESDP-----DPKRTR 111 (343)
Q Consensus 41 ~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~--~~~~~l~~~~--g~~vi~~D~~G~G~S~~-----~~~~~~ 111 (343)
+..+.+..+|. .+.+||..+-.++.-.. +.. .+ ..+++.. | +|-.+-+-|-...+- .+....
T Consensus 14 ~RdMel~ryGH--aG~pVvvFpts~Grf~e-----yed~G~v-~ala~fie~G-~vQlft~~gldsESf~a~h~~~adr~ 84 (227)
T COG4947 14 NRDMELNRYGH--AGIPVVVFPTSGGRFNE-----YEDFGMV-DALASFIEEG-LVQLFTLSGLDSESFLATHKNAADRA 84 (227)
T ss_pred cchhhhhhccC--CCCcEEEEecCCCcchh-----hhhcccH-HHHHHHHhcC-cEEEEEecccchHhHhhhcCCHHHHH
Confidence 45667777886 45567777766665555 221 22 3333211 4 333333334332211 111122
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEccccc
Q 019314 112 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 165 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 165 (343)
+...+--..+++..-. ...++-|.||||..|..+..++|+...++|.+++..+
T Consensus 85 ~rH~AyerYv~eEalp-gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 85 ERHRAYERYVIEEALP-GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHHHHHHHHHHhhcC-CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 3333334445555444 3678889999999999999999999999999999743
No 210
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.17 E-value=0.022 Score=45.05 Aligned_cols=100 Identities=16% Similarity=0.070 Sum_probs=55.5
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHh----CCC--
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL----GLG-- 128 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l----~~~-- 128 (343)
...|-||-|....+.- .-.|+.+. +.|+++ ||.|++.=+.- | -....-..+..+.....++.+ +..
T Consensus 17 ~gvihFiGGaf~ga~P--~itYr~lL-e~La~~-Gy~ViAtPy~~-t---fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAP--QITYRYLL-ERLADR-GYAVIATPYVV-T---FDHQAIAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred CEEEEEcCcceeccCc--HHHHHHHH-HHHHhC-CcEEEEEecCC-C---CcHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4456666664322211 11155665 888876 99999875531 1 000001111122222222222 221
Q ss_pred -CeEEEEEecccHHHHHHHHHHhhcccceeEEEcc
Q 019314 129 -SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAP 162 (343)
Q Consensus 129 -~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~ 162 (343)
-|++-+|||+|+.+-+.+...++..-++.++++-
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 3678899999999999888887665677787774
No 211
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.17 E-value=0.019 Score=48.45 Aligned_cols=86 Identities=19% Similarity=0.274 Sum_probs=60.4
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHh----CCCCe
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL----GLGSK 130 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l----~~~~~ 130 (343)
...-||+.|=++-... =+.+. ..|.+. |+.|+.+|-.=|=-|. .+.++.+.|+..+++.. +. ++
T Consensus 260 d~~av~~SGDGGWr~l-----Dk~v~-~~l~~~-gvpVvGvdsLRYfW~~----rtPe~~a~Dl~r~i~~y~~~w~~-~~ 327 (456)
T COG3946 260 DTVAVFYSGDGGWRDL-----DKEVA-EALQKQ-GVPVVGVDSLRYFWSE----RTPEQIAADLSRLIRFYARRWGA-KR 327 (456)
T ss_pred ceEEEEEecCCchhhh-----hHHHH-HHHHHC-CCceeeeehhhhhhcc----CCHHHHHHHHHHHHHHHHHhhCc-ce
Confidence 4455777766654444 34454 556555 9999999965444333 47788888888888765 55 79
Q ss_pred EEEEEecccHHHHHHHHHHhhc
Q 019314 131 FYVVGFSMGGQVVWSCLKYISH 152 (343)
Q Consensus 131 ~~lvG~S~Gg~~a~~~a~~~p~ 152 (343)
+.|+|+|+|+=+.-....+.|.
T Consensus 328 ~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 328 VLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred EEEEeecccchhhHHHHHhCCH
Confidence 9999999999887766666554
No 212
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.09 E-value=0.025 Score=43.23 Aligned_cols=50 Identities=28% Similarity=0.357 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHH------hhcccceeEEEccc
Q 019314 113 SLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKY------ISHRLTGAALIAPV 163 (343)
Q Consensus 113 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~------~p~~v~~lil~~~~ 163 (343)
+..+.|.+......- .+++|+|+|.|+.++..++.. ..++|.++++++-.
T Consensus 66 ~~~~~i~~~~~~CP~-~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 66 NLVRLIEEYAARCPN-TKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDP 121 (179)
T ss_dssp HHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-T
T ss_pred HHHHHHHHHHHhCCC-CCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCC
Confidence 333334443344333 699999999999999999876 34689999998754
No 213
>PLN02454 triacylglycerol lipase
Probab=95.68 E-value=0.027 Score=48.36 Aligned_cols=21 Identities=19% Similarity=0.226 Sum_probs=18.4
Q ss_pred eEEEEEecccHHHHHHHHHHh
Q 019314 130 KFYVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 130 ~~~lvG~S~Gg~~a~~~a~~~ 150 (343)
++++.|||+||.+|+..|...
T Consensus 229 sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred eEEEEecCHHHHHHHHHHHHH
Confidence 499999999999999998653
No 214
>PLN02162 triacylglycerol lipase
Probab=95.59 E-value=0.037 Score=48.08 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHH
Q 019314 112 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLK 148 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~ 148 (343)
.++.+.+.+++..... .++++.|||+||.+|..+|.
T Consensus 262 ~~I~~~L~~lL~k~p~-~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNKN-LKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCCC-ceEEEEecChHHHHHHHHHH
Confidence 3444455555555444 68999999999999998865
No 215
>PLN00413 triacylglycerol lipase
Probab=95.58 E-value=0.042 Score=47.87 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHH
Q 019314 112 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLK 148 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~ 148 (343)
.++.+.+..+++.... .++++.|||+||.+|..+|.
T Consensus 268 y~i~~~Lk~ll~~~p~-~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 268 YTILRHLKEIFDQNPT-SKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHCCC-CeEEEEecCHHHHHHHHHHH
Confidence 3456667777776655 68999999999999999885
No 216
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.46 E-value=0.033 Score=34.00 Aligned_cols=37 Identities=8% Similarity=-0.154 Sum_probs=21.2
Q ss_pred eeeeecCccEEEEEeccC-------CCCCCeEEEecCCCCCccc
Q 019314 34 LLLQQTSHQYLKFLNSIE-------YPTSLLHLNFHLFNGCVGS 70 (343)
Q Consensus 34 ~~~~~~~~~~l~y~~~g~-------~~~~~~vv~ihG~~~~~~~ 70 (343)
..+++.||--|....-.. .+.+|+|++.||+.+++..
T Consensus 15 h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 15 HEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp EEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred EEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 467788887777654322 2358999999999999998
No 217
>PLN02571 triacylglycerol lipase
Probab=95.44 E-value=0.025 Score=48.61 Aligned_cols=38 Identities=11% Similarity=0.123 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhCC-CCeEEEEEecccHHHHHHHHHH
Q 019314 112 KSLALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~-~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
+++.+++..+++...- ..++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4455667777766532 1268999999999999998875
No 218
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.06 E-value=0.04 Score=41.74 Aligned_cols=62 Identities=18% Similarity=0.131 Sum_probs=45.9
Q ss_pred CCCC-CcEEEEecCCCCCCChhHHHHHh---hcCCC--ceEEEcCCCCCccccC----cchHHHHHHHHHcc
Q 019314 276 PNSE-GSVHLWQGDEDRLVPVILQRYIS---KKLPW--IRYHEIPGSGHLIADA----DGMTEAIIKALLLG 337 (343)
Q Consensus 276 ~~i~-~Pvl~i~G~~D~~~~~~~~~~~~---~~~~~--~~~~~~~~~gH~~~~e----p~~~~~~i~~fl~~ 337 (343)
..|+ +++|-|-|++|.++.+....... ..+|. ...++.+|+||+..+. .+++.-.|.+|+.+
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 3444 56888999999999987655544 44553 3578889999998884 56778888888864
No 219
>PLN02408 phospholipase A1
Probab=94.89 E-value=0.045 Score=46.38 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhCC-CCeEEEEEecccHHHHHHHHHHhh
Q 019314 114 LALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 114 ~~~di~~~l~~l~~-~~~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
+.+.|..+++...- ..++++.|||+||.+|...|....
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 34556666665542 135999999999999999887643
No 220
>PLN02310 triacylglycerol lipase
Probab=94.69 E-value=0.06 Score=46.23 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhC---CCCeEEEEEecccHHHHHHHHHH
Q 019314 113 SLALDIEELADQLG---LGSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 113 ~~~~di~~~l~~l~---~~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
++.+.+..+++... .+.++.+.|||+||.+|...|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455666666542 22479999999999999988864
No 221
>PLN02934 triacylglycerol lipase
Probab=94.65 E-value=0.062 Score=47.26 Aligned_cols=37 Identities=22% Similarity=0.306 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHH
Q 019314 112 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
......+..+++.... .++++.|||+||.+|..+|..
T Consensus 305 ~~v~~~lk~ll~~~p~-~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN-AKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHCCC-CeEEEeccccHHHHHHHHHHH
Confidence 3455566677766654 699999999999999998753
No 222
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.63 E-value=0.22 Score=45.80 Aligned_cols=107 Identities=15% Similarity=0.029 Sum_probs=61.7
Q ss_pred CCeEEEecCCCC---CcccchhhhhhhhhhHHHHhHcCcEEEEecCC----C---cccCCCCCCccHHHHHHHHHHHHHH
Q 019314 55 SLLHLNFHLFNG---CVGSLNFTVLACLSFQEVVDELGIYIVSFDRP----G---YGESDPDPKRTRKSLALDIEELADQ 124 (343)
Q Consensus 55 ~~~vv~ihG~~~---~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G---~G~S~~~~~~~~~~~~~di~~~l~~ 124 (343)
-|++|+|||.+. ++.. +....-..+....+.-|+.+.+| | .|.+..+....+.|+...+.-+-+.
T Consensus 112 ~pV~V~iHGG~~~~gs~~~-----~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~ 186 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASS-----FEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDN 186 (545)
T ss_pred CCEEEEEeCCceeeccccc-----hhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHH
Confidence 589999999873 3222 10110022333324556677766 2 2322232334566665554444333
Q ss_pred ---hC-CCCeEEEEEecccHHHHHHHHHH--hhcccceeEEEcccccc
Q 019314 125 ---LG-LGSKFYVVGFSMGGQVVWSCLKY--ISHRLTGAALIAPVINY 166 (343)
Q Consensus 125 ---l~-~~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lil~~~~~~~ 166 (343)
.| -.+++.|+|||.||..+..+... ....+.++|.+++....
T Consensus 187 I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 187 IPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred HHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccccc
Confidence 33 22799999999999998777653 22468888888876543
No 223
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.53 E-value=1.5 Score=37.12 Aligned_cols=57 Identities=11% Similarity=-0.035 Sum_probs=46.2
Q ss_pred EEEEecCCCCCCChhHHHHHhhcCC----CceEEEcCCCCCccccC--cchHHHHHHHHHccc
Q 019314 282 VHLWQGDEDRLVPVILQRYISKKLP----WIRYHEIPGSGHLIADA--DGMTEAIIKALLLGE 338 (343)
Q Consensus 282 vl~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~~~ 338 (343)
.+++.+..|.++|.+..+++.+... +++.+-+.++-|..+.. |....+...+|++..
T Consensus 228 ~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 228 QLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred ceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 8899999999999988887754332 45666777899999884 999999999999765
No 224
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.49 E-value=0.66 Score=41.55 Aligned_cols=76 Identities=21% Similarity=0.218 Sum_probs=54.6
Q ss_pred CcEEEEecCCCcccCCC----CCCc-----------cHHHHHHHHHHHHHHh---CCCCeEEEEEecccHHHHHHHHHHh
Q 019314 89 GIYIVSFDRPGYGESDP----DPKR-----------TRKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 89 g~~vi~~D~~G~G~S~~----~~~~-----------~~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~~a~~~a~~~ 150 (343)
||.++.=|- ||..+.. .... ++.+.+.--.++++.. .. +.-+..|.|.||.-++..|.+|
T Consensus 59 G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p-~~sY~~GcS~GGRqgl~~AQry 136 (474)
T PF07519_consen 59 GYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAP-KYSYFSGCSTGGRQGLMAAQRY 136 (474)
T ss_pred CeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCC-CceEEEEeCCCcchHHHHHHhC
Confidence 999999886 6665532 1111 2333333344455443 33 6789999999999999999999
Q ss_pred hcccceeEEEcccccc
Q 019314 151 SHRLTGAALIAPVINY 166 (343)
Q Consensus 151 p~~v~~lil~~~~~~~ 166 (343)
|+..++++.-+|+.++
T Consensus 137 P~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 137 PEDFDGILAGAPAINW 152 (474)
T ss_pred hhhcCeEEeCCchHHH
Confidence 9999999999998753
No 225
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.31 E-value=0.18 Score=42.62 Aligned_cols=38 Identities=26% Similarity=0.578 Sum_probs=30.7
Q ss_pred CCCCeEEEEEecccHHHHHHHHHHhhcc-----cceeEEEcccc
Q 019314 126 GLGSKFYVVGFSMGGQVVWSCLKYISHR-----LTGAALIAPVI 164 (343)
Q Consensus 126 ~~~~~~~lvG~S~Gg~~a~~~a~~~p~~-----v~~lil~~~~~ 164 (343)
+. .|+.|||||+|+.+.........++ |+.+++++++.
T Consensus 218 G~-RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GE-RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CC-CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 44 6899999999999998877665544 89999998753
No 226
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.04 E-value=0.094 Score=46.30 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhC---CCCeEEEEEecccHHHHHHHHHH
Q 019314 113 SLALDIEELADQLG---LGSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 113 ~~~~di~~~l~~l~---~~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
+..+++..+++... .+.++.|.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34566777776553 22479999999999999988864
No 227
>PLN02324 triacylglycerol lipase
Probab=94.01 E-value=0.086 Score=45.35 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCC-CCeEEEEEecccHHHHHHHHHH
Q 019314 114 LALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 114 ~~~di~~~l~~l~~-~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
+.+.|..+++...- +..+++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34456666665532 1369999999999999998864
No 228
>PLN02753 triacylglycerol lipase
Probab=93.78 E-value=0.11 Score=45.84 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhCC----CCeEEEEEecccHHHHHHHHHH
Q 019314 113 SLALDIEELADQLGL----GSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 113 ~~~~di~~~l~~l~~----~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
++.+.+..+++.... +.++.+.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344456666665421 2589999999999999999864
No 229
>PLN02802 triacylglycerol lipase
Probab=93.69 E-value=0.12 Score=45.54 Aligned_cols=37 Identities=14% Similarity=0.221 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhC-CCCeEEEEEecccHHHHHHHHHHh
Q 019314 114 LALDIEELADQLG-LGSKFYVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 114 ~~~di~~~l~~l~-~~~~~~lvG~S~Gg~~a~~~a~~~ 150 (343)
+.+++..+++... ....+++.|||+||.+|...|...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 4445556665543 113689999999999999888754
No 230
>PLN02761 lipase class 3 family protein
Probab=93.25 E-value=0.15 Score=45.09 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhC-----CCCeEEEEEecccHHHHHHHHHH
Q 019314 113 SLALDIEELADQLG-----LGSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 113 ~~~~di~~~l~~l~-----~~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
++.+.|..+++... ...++++.|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 34455666665541 21379999999999999988864
No 231
>PLN02719 triacylglycerol lipase
Probab=93.17 E-value=0.16 Score=44.85 Aligned_cols=37 Identities=19% Similarity=0.337 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhC----CCCeEEEEEecccHHHHHHHHHHh
Q 019314 114 LALDIEELADQLG----LGSKFYVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 114 ~~~di~~~l~~l~----~~~~~~lvG~S~Gg~~a~~~a~~~ 150 (343)
+.+.|..+++... ...++.+.|||+||.+|...|...
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 3445555555442 113799999999999999988643
No 232
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.13 E-value=0.13 Score=43.79 Aligned_cols=83 Identities=17% Similarity=0.141 Sum_probs=45.1
Q ss_pred CCeEEEecCCCC-CcccchhhhhhhhhhHHHHhHc-CcEEEEecCCCcccC-CCCCC---ccHHHHHHHHHHHHHHhCCC
Q 019314 55 SLLHLNFHLFNG-CVGSLNFTVLACLSFQEVVDEL-GIYIVSFDRPGYGES-DPDPK---RTRKSLALDIEELADQLGLG 128 (343)
Q Consensus 55 ~~~vv~ihG~~~-~~~~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S-~~~~~---~~~~~~~~di~~~l~~l~~~ 128 (343)
+-.+|++||+-+ +... |...+ ....... +. .+..+|+-+. ....+ .=-...++++.+.+....+
T Consensus 80 ~HLvVlthGi~~~~~~~-----~~~~~-~~~~kk~p~~---~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si- 149 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEY-----WKEKI-EQMTKKMPDK---LIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSI- 149 (405)
T ss_pred ceEEEeccccccccHHH-----HHHHH-HhhhcCCCcc---eEeeeccccchhhccccceeeecccHHHHhhhhhcccc-
Confidence 457999999988 3444 66655 5444432 22 2333332211 11111 1112234444444444457
Q ss_pred CeEEEEEecccHHHHHHHH
Q 019314 129 SKFYVVGFSMGGQVVWSCL 147 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a 147 (343)
+++..+|||+||.++-.+.
T Consensus 150 ~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 150 EKISFVGHSLGGLVARYAI 168 (405)
T ss_pred ceeeeeeeecCCeeeeEEE
Confidence 6999999999998875443
No 233
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.10 E-value=0.5 Score=37.54 Aligned_cols=62 Identities=21% Similarity=0.350 Sum_probs=40.0
Q ss_pred CcEEEEecCCCc-----ccCCCCCCccHHHHHHHHHHHHHHh-CCCCeEEEEEecccHHHHHHHHHHh
Q 019314 89 GIYIVSFDRPGY-----GESDPDPKRTRKSLALDIEELADQL-GLGSKFYVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 89 g~~vi~~D~~G~-----G~S~~~~~~~~~~~~~di~~~l~~l-~~~~~~~lvG~S~Gg~~a~~~a~~~ 150 (343)
|+.+..+++|.. |.....-+.++.+=++.+.+.++.. ..+++++|+|+|+|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 456667777651 1111122336666666666666652 2347999999999999999888764
No 234
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.05 E-value=6.1 Score=35.03 Aligned_cols=116 Identities=16% Similarity=0.109 Sum_probs=69.8
Q ss_pred ecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcE-EEEecCCCcccCCCCCCc-cHHHHH
Q 019314 38 QTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIY-IVSFDRPGYGESDPDPKR-TRKSLA 115 (343)
Q Consensus 38 ~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~-vi~~D~~G~G~S~~~~~~-~~~~~~ 115 (343)
...+..+.|.-...+-..|..|+..|+-. .+. |... .+.++.|.. .+.-|.|=-|.+---... --+.+.
T Consensus 272 D~~reEi~yYFnPGD~KPPL~VYFSGyR~-aEG-----FEgy---~MMk~Lg~PfLL~~DpRleGGaFYlGs~eyE~~I~ 342 (511)
T TIGR03712 272 DSKRQEFIYYFNPGDFKPPLNVYFSGYRP-AEG-----FEGY---FMMKRLGAPFLLIGDPRLEGGAFYLGSDEYEQGII 342 (511)
T ss_pred cCCCCeeEEecCCcCCCCCeEEeeccCcc-cCc-----chhH---HHHHhcCCCeEEeeccccccceeeeCcHHHHHHHH
Confidence 34445555444432333566688888876 444 3221 122333433 555677776665311111 234556
Q ss_pred HHHHHHHHHhCCC-CeEEEEEecccHHHHHHHHHHhhcccceeEEEcccc
Q 019314 116 LDIEELADQLGLG-SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 164 (343)
Q Consensus 116 ~di~~~l~~l~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 164 (343)
+-|.+.++.|+.+ +.++|-|-|||..-|+.+++... -.++|+.-|.+
T Consensus 343 ~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~ 390 (511)
T TIGR03712 343 NVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLV 390 (511)
T ss_pred HHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCccc
Confidence 6777888888763 57899999999999999998743 35666666643
No 235
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.17 E-value=0.26 Score=41.97 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHH
Q 019314 112 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
..+.+++..+++...- -++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~-~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPN-YSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCC-cEEEEecCChHHHHHHHHHHH
Confidence 5677778888888775 699999999999999998875
No 236
>PLN02847 triacylglycerol lipase
Probab=91.82 E-value=0.34 Score=43.67 Aligned_cols=21 Identities=29% Similarity=0.292 Sum_probs=18.8
Q ss_pred CeEEEEEecccHHHHHHHHHH
Q 019314 129 SKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999988765
No 237
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=91.50 E-value=0.8 Score=41.04 Aligned_cols=102 Identities=20% Similarity=0.131 Sum_probs=58.9
Q ss_pred CCeEEEecCCCC---CcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHH---HhCC-
Q 019314 55 SLLHLNFHLFNG---CVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELAD---QLGL- 127 (343)
Q Consensus 55 ~~~vv~ihG~~~---~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~---~l~~- 127 (343)
+-.|+=+||.|. ++.. -... +..+++..|..|+.+|+--.-+..-+ ..+++.-=...-+|+ .+|.
T Consensus 396 ~sli~HcHGGGfVAqsSkS-----HE~Y-Lr~Wa~aL~cPiiSVdYSLAPEaPFP--RaleEv~fAYcW~inn~allG~T 467 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKS-----HEPY-LRSWAQALGCPIISVDYSLAPEAPFP--RALEEVFFAYCWAINNCALLGST 467 (880)
T ss_pred ceEEEEecCCceeeecccc-----ccHH-HHHHHHHhCCCeEEeeeccCCCCCCC--cHHHHHHHHHHHHhcCHHHhCcc
Confidence 335777888874 3333 2233 37777888999999998533222211 123322222222222 2332
Q ss_pred CCeEEEEEecccHHHHHHHHHHhhc----ccceeEEEcccc
Q 019314 128 GSKFYVVGFSMGGQVVWSCLKYISH----RLTGAALIAPVI 164 (343)
Q Consensus 128 ~~~~~lvG~S~Gg~~a~~~a~~~p~----~v~~lil~~~~~ 164 (343)
+++++++|.|.||.+.+-.|.+--+ .-+++++.-+..
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 3799999999999887766654321 246777776544
No 238
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=90.10 E-value=2.3 Score=35.23 Aligned_cols=125 Identities=18% Similarity=0.174 Sum_probs=76.9
Q ss_pred eeeecCccEEEEEecc----CCCCCCeEEEecCCCCCccc-chhhhhhhhh-h-H-------HHHhHcCcEEEEecCC-C
Q 019314 35 LLQQTSHQYLKFLNSI----EYPTSLLHLNFHLFNGCVGS-LNFTVLACLS-F-Q-------EVVDELGIYIVSFDRP-G 99 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g----~~~~~~~vv~ihG~~~~~~~-~~~~~~~~~~-~-~-------~l~~~~g~~vi~~D~~-G 99 (343)
++...++..+.|..+- .....|..+.+.|.++.+.. +.. |..+- . . ...+ ...++.+|-| |
T Consensus 7 ~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GN--FeE~GPl~~~~~~r~~TWlk--~adllfvDnPVG 82 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGN--FEELGPLDLDGSPRDWTWLK--DADLLFVDNPVG 82 (414)
T ss_pred ceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccc--hhhcCCcccCCCcCCchhhh--hccEEEecCCCc
Confidence 3444455555544332 12456778899988766544 100 11110 0 0 0111 1357778877 7
Q ss_pred cccCC--CCCCc--cHHHHHHHHHHHHHHh-------CCCCeEEEEEecccHHHHHHHHHHhhc---------ccceeEE
Q 019314 100 YGESD--PDPKR--TRKSLALDIEELADQL-------GLGSKFYVVGFSMGGQVVWSCLKYISH---------RLTGAAL 159 (343)
Q Consensus 100 ~G~S~--~~~~~--~~~~~~~di~~~l~~l-------~~~~~~~lvG~S~Gg~~a~~~a~~~p~---------~v~~lil 159 (343)
.|.|- ....| +..+.+.|+.++++.+ .. .|++|+--|+||-+|..++...-+ .+.+++|
T Consensus 83 aGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t-~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaL 161 (414)
T KOG1283|consen 83 AGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKT-VPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVAL 161 (414)
T ss_pred CceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccc-cceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEc
Confidence 77774 33333 6788999999999875 33 699999999999999988875332 3667777
Q ss_pred Ecccc
Q 019314 160 IAPVI 164 (343)
Q Consensus 160 ~~~~~ 164 (343)
-++.+
T Consensus 162 GDSWI 166 (414)
T KOG1283|consen 162 GDSWI 166 (414)
T ss_pred cCccc
Confidence 77654
No 239
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.22 E-value=1.4 Score=39.76 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=26.0
Q ss_pred cHHHHHHHHHHHHHHhCC--CCeEEEEEecccHHHHHHHHHH
Q 019314 110 TRKSLALDIEELADQLGL--GSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 110 ~~~~~~~di~~~l~~l~~--~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
++..-...+.+.+...++ +.+++.|||||||.++=.+...
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHH
Confidence 344444445555555443 3799999999999887666543
No 240
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=85.07 E-value=2.2 Score=34.66 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=26.1
Q ss_pred CCeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 128 GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 128 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
+.++.+-|||+||.+|..+..++. +-.+..-+|.
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred CceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 368999999999999999888874 4455555554
No 241
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=85.07 E-value=2.2 Score=34.66 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=26.1
Q ss_pred CCeEEEEEecccHHHHHHHHHHhhcccceeEEEccc
Q 019314 128 GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 128 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
+.++.+-|||+||.+|..+..++. +-.+..-+|.
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred CceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 368999999999999999888874 4455555554
No 242
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=82.67 E-value=12 Score=25.44 Aligned_cols=77 Identities=14% Similarity=0.139 Sum_probs=50.0
Q ss_pred HHHHhHcCcEEEEecCCCcccCCCCC--CccHHHHHHHHHHHHHHhCCCCeEEEEEecccH--HHHHHHHHHhhccccee
Q 019314 82 QEVVDELGIYIVSFDRPGYGESDPDP--KRTRKSLALDIEELADQLGLGSKFYVVGFSMGG--QVVWSCLKYISHRLTGA 157 (343)
Q Consensus 82 ~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg--~~a~~~a~~~p~~v~~l 157 (343)
..+.+..||..=.+.++..|.+.... ....+-=...|..+++.... .++++||-|--. -+-..+|.++|++|.++
T Consensus 17 ~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~-~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai 95 (100)
T PF09949_consen 17 RDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPE-RKFILIGDSGQHDPEIYAEIARRFPGRILAI 95 (100)
T ss_pred HHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCC-CcEEEEeeCCCcCHHHHHHHHHHCCCCEEEE
Confidence 55555556766667777775543211 11112345567788888876 799999988654 34446778899999987
Q ss_pred EE
Q 019314 158 AL 159 (343)
Q Consensus 158 il 159 (343)
.+
T Consensus 96 ~I 97 (100)
T PF09949_consen 96 YI 97 (100)
T ss_pred EE
Confidence 64
No 243
>PF03283 PAE: Pectinacetylesterase
Probab=82.65 E-value=5.4 Score=34.40 Aligned_cols=46 Identities=15% Similarity=0.177 Sum_probs=28.4
Q ss_pred HHHHHHH-hCCCCeEEEEEecccHHHHHHHHH----HhhcccceeEEEccc
Q 019314 118 IEELADQ-LGLGSKFYVVGFSMGGQVVWSCLK----YISHRLTGAALIAPV 163 (343)
Q Consensus 118 i~~~l~~-l~~~~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~lil~~~~ 163 (343)
+..++.. ++-.++++|-|.|.||.-++..+- ..|..++-.++.+++
T Consensus 144 l~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG 194 (361)
T PF03283_consen 144 LDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSG 194 (361)
T ss_pred HHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccc
Confidence 3344444 322278999999999998887654 355444444445544
No 244
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=81.93 E-value=2.5 Score=38.00 Aligned_cols=60 Identities=18% Similarity=0.183 Sum_probs=44.6
Q ss_pred CCcEEEEecCCCCCCChhHHHHHhhc----CCC--------ceEEEcCCCCCccccC---cchHHHHHHHHHccc
Q 019314 279 EGSVHLWQGDEDRLVPVILQRYISKK----LPW--------IRYHEIPGSGHLIADA---DGMTEAIIKALLLGE 338 (343)
Q Consensus 279 ~~Pvl~i~G~~D~~~~~~~~~~~~~~----~~~--------~~~~~~~~~gH~~~~e---p~~~~~~i~~fl~~~ 338 (343)
.-.+++.||..|.++|+.....+.++ ... .++..+||.+|+.--. +-.....+.+|.++-
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 34599999999999998876554443 221 3789999999998763 456777888888753
No 245
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=75.97 E-value=33 Score=28.45 Aligned_cols=93 Identities=18% Similarity=0.143 Sum_probs=49.2
Q ss_pred CeEEEecCCCCCcccchh-hhhhhhhhHHHHhHcCcEEEEecCCCcccC--------CCCC--------CccHHHHHHHH
Q 019314 56 LLHLNFHLFNGCVGSLNF-TVLACLSFQEVVDELGIYIVSFDRPGYGES--------DPDP--------KRTRKSLALDI 118 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~-~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S--------~~~~--------~~~~~~~~~di 118 (343)
..|||+=|.+.+...-.. .--..+. +.+.+..+-..+++=.+|.|-. .... ...+++-+.+.
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~-~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~a 80 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLY-DAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDA 80 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHH-HHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHH
Confidence 356777777765554110 0012231 3341221234555666777761 1100 12344444433
Q ss_pred H-HHHHHhCCCCeEEEEEecccHHHHHHHHHH
Q 019314 119 E-ELADQLGLGSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 119 ~-~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
. .+.+....++++.++|.|-|+..|-.+|..
T Consensus 81 y~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 81 YRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 3 333555555789999999999999888754
No 246
>PRK12467 peptide synthase; Provisional
Probab=74.88 E-value=13 Score=43.21 Aligned_cols=99 Identities=11% Similarity=0.031 Sum_probs=67.2
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVV 134 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lv 134 (343)
-+.|++.|...+.... +.++. ..+.. +..++.+..++.- .+.....++++++....+.+.......+..+.
T Consensus 3692 ~~~l~~~h~~~r~~~~-----~~~l~-~~l~~--~~~~~~l~~~~~~-~d~~~~~~~~~~~~~y~~~~~~~~~~~p~~l~ 3762 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFD-----YEPLA-VILEG--DRHVLGLTCRHLL-DDGWQDTSLQAMAVQYADYILWQQAKGPYGLL 3762 (3956)
T ss_pred ccceeeechhhcchhh-----hHHHH-HHhCC--CCcEEEEeccccc-cccCCccchHHHHHHHHHHHHHhccCCCeeee
Confidence 3569999999888776 66654 44433 4578888776543 22223447777888877777766543589999
Q ss_pred EecccHHHHHHHHHHh---hcccceeEEEcc
Q 019314 135 GFSMGGQVVWSCLKYI---SHRLTGAALIAP 162 (343)
Q Consensus 135 G~S~Gg~~a~~~a~~~---p~~v~~lil~~~ 162 (343)
|+|+||.++..++..- .+.+.-+.++..
T Consensus 3763 g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3763 GWSLGGTLARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred eeecchHHHHHHHHHHHHcCCceeEEEEEec
Confidence 9999999999888653 334555555543
No 247
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=73.00 E-value=26 Score=30.15 Aligned_cols=91 Identities=15% Similarity=0.080 Sum_probs=60.0
Q ss_pred CCeEEEecCCCCCcccch--hhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEE
Q 019314 55 SLLHLNFHLFNGCVGSLN--FTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFY 132 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~--~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~ 132 (343)
...||++||-.+++...+ ..-|..++ +.+.++ | .+-.+|.--.|.-++ +++-+.-+..++.. .+-.
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~-~~~~~r-~-lip~~D~AYQGF~~G-----leeDa~~lR~~a~~----~~~~ 238 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELA-DLIKER-G-LIPFFDIAYQGFADG-----LEEDAYALRLFAEV----GPEL 238 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHH-HHHHHc-C-Ceeeeehhhhhhccc-----hHHHHHHHHHHHHh----CCcE
Confidence 457999999887766522 22388876 555543 5 466778776664432 44444445555543 2338
Q ss_pred EEEecccHHHHHHHHHHhhcccceeEEEcc
Q 019314 133 VVGFSMGGQVVWSCLKYISHRLTGAALIAP 162 (343)
Q Consensus 133 lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~ 162 (343)
+|..|+.=.++ .|.+||-++++++.
T Consensus 239 lva~S~SKnfg-----LYgERVGa~~vva~ 263 (396)
T COG1448 239 LVASSFSKNFG-----LYGERVGALSVVAE 263 (396)
T ss_pred EEEehhhhhhh-----hhhhccceeEEEeC
Confidence 88888887766 47899999999976
No 248
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=71.49 E-value=12 Score=33.37 Aligned_cols=38 Identities=26% Similarity=0.562 Sum_probs=29.3
Q ss_pred CCCCeEEEEEecccHHHHHHHHHHhh-----cccceeEEEcccc
Q 019314 126 GLGSKFYVVGFSMGGQVVWSCLKYIS-----HRLTGAALIAPVI 164 (343)
Q Consensus 126 ~~~~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~lil~~~~~ 164 (343)
|. .|+.+||+|.|+.+-........ ..|..+++++++.
T Consensus 445 G~-RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 445 GN-RPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred CC-CceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 66 79999999999999886665322 2588899988753
No 249
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=69.63 E-value=3.7 Score=34.81 Aligned_cols=29 Identities=21% Similarity=0.315 Sum_probs=23.1
Q ss_pred HHHHHHHhCCCCeEEEEEecccHHHHHHHH
Q 019314 118 IEELADQLGLGSKFYVVGFSMGGQVVWSCL 147 (343)
Q Consensus 118 i~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a 147 (343)
+.++++..|+ ++-.++|||+|=..|+.++
T Consensus 74 l~~~l~~~Gi-~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWGI-KPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTTH-CESEEEESTTHHHHHHHHT
T ss_pred hhhhhccccc-ccceeeccchhhHHHHHHC
Confidence 4466677788 7999999999988877654
No 250
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=69.28 E-value=7.8 Score=33.65 Aligned_cols=53 Identities=13% Similarity=0.007 Sum_probs=35.5
Q ss_pred EEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCcccc-C-c----chHHHHHHHHHc
Q 019314 282 VHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIAD-A-D----GMTEAIIKALLL 336 (343)
Q Consensus 282 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e-p----~~~~~~i~~fl~ 336 (343)
+|+|+|++|++.-.. -.+.+.-.++.+.+.||+.|..-. . | ++....|.+|-.
T Consensus 354 mlFVYG~nDPW~A~~--f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 354 MLFVYGENDPWSAEP--FRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred EEEEeCCCCCcccCc--cccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 999999999987422 222223346788899999998765 2 3 345556666643
No 251
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=69.00 E-value=13 Score=31.72 Aligned_cols=66 Identities=21% Similarity=0.222 Sum_probs=41.6
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVV 134 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lv 134 (343)
..+|+.+.|+-.|+-. ..|..+.||.|+.+-+.-+.. +....-...+-.+|...+.+.+|+ ++.++
T Consensus 4 ~kV~v~mSGGVDSSVa-----------A~lLk~QGyeViGl~m~~~~~-~~~~~C~s~~d~~da~~va~~LGI--p~~~v 69 (356)
T COG0482 4 KKVLVGMSGGVDSSVA-----------AYLLKEQGYEVIGLFMKNWDE-DGGGGCCSEEDLRDAERVADQLGI--PLYVV 69 (356)
T ss_pred cEEEEEccCCHHHHHH-----------HHHHHHcCCeEEEEEEEeecc-CCCCcCCchhHHHHHHHHHHHhCC--ceEEE
Confidence 4567777776666555 666666699999998887665 111112334455667777777776 44444
No 252
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=68.26 E-value=6 Score=33.05 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=23.4
Q ss_pred HHHHHHHhCCCCeEEEEEecccHHHHHHHHH
Q 019314 118 IEELADQLGLGSKFYVVGFSMGGQVVWSCLK 148 (343)
Q Consensus 118 i~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~ 148 (343)
+.++++.+|+ ++-.++|||+|-..|+.++.
T Consensus 72 ~~~~l~~~Gi-~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGV-RPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCC-cccEEEecCHHHHHHHHHhC
Confidence 3355667788 79999999999988876653
No 253
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=68.12 E-value=6 Score=33.26 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=26.1
Q ss_pred HHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHh
Q 019314 117 DIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 117 di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~ 150 (343)
-+.+.++..++ ..-.++|.|+|+.++..+|..+
T Consensus 32 GvL~aLee~gi-~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGI-PVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCC
Confidence 35556666688 5778999999999999999763
No 254
>PRK10279 hypothetical protein; Provisional
Probab=67.28 E-value=7.1 Score=32.72 Aligned_cols=33 Identities=18% Similarity=0.105 Sum_probs=26.2
Q ss_pred HHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhh
Q 019314 118 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 118 i~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
+.+.++..++ ..-.++|.|+|+.++..+|....
T Consensus 23 VL~aL~E~gi-~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGI-EIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCC-CcCEEEEEcHHHHHHHHHHcCCh
Confidence 4455556788 68899999999999999997543
No 255
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=65.69 E-value=7.2 Score=32.61 Aligned_cols=30 Identities=17% Similarity=-0.035 Sum_probs=23.3
Q ss_pred HHHHHHHhCCCCeEEEEEecccHHHHHHHHH
Q 019314 118 IEELADQLGLGSKFYVVGFSMGGQVVWSCLK 148 (343)
Q Consensus 118 i~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~ 148 (343)
+.+++...++ ++..++|||+|=..|+.++.
T Consensus 66 l~~~l~~~g~-~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLP-RPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCC-CCcEEeecCHHHHHHHHHhC
Confidence 3455566788 79999999999988877653
No 256
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=65.04 E-value=7.1 Score=29.54 Aligned_cols=33 Identities=15% Similarity=-0.002 Sum_probs=25.1
Q ss_pred HHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhh
Q 019314 118 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 118 i~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
+.+.++..++ ..-.+.|.|.|+.++..++...+
T Consensus 16 vl~aL~e~gi-~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGP-LIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCC
Confidence 3444555577 57789999999999999988643
No 257
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=63.50 E-value=8.4 Score=29.76 Aligned_cols=31 Identities=19% Similarity=0.046 Sum_probs=23.5
Q ss_pred HHHHHHhCCCCeEEEEEecccHHHHHHHHHHh
Q 019314 119 EELADQLGLGSKFYVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 119 ~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~ 150 (343)
.+.++..++ ..-.++|.|.||.+|..++...
T Consensus 18 l~~L~e~~~-~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEAGI-LKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHcCC-CcceEEEECHHHHHHHHHHcCC
Confidence 334445567 5778999999999999998743
No 258
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=63.50 E-value=9.6 Score=31.36 Aligned_cols=31 Identities=19% Similarity=0.113 Sum_probs=24.9
Q ss_pred HHHHHHHhCCCCeEEEEEecccHHHHHHHHHH
Q 019314 118 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 118 i~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
+.+.+++.++ ..-.+.|.|+|+.++..+|..
T Consensus 28 VL~aLeE~gi-~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEAGI-PIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHcCC-CccEEEEECHHHHHHHHHHcC
Confidence 4455566788 577899999999999999975
No 259
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=61.38 E-value=11 Score=30.07 Aligned_cols=30 Identities=23% Similarity=0.101 Sum_probs=23.0
Q ss_pred HHHHHhCCCCeEEEEEecccHHHHHHHHHHh
Q 019314 120 ELADQLGLGSKFYVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 120 ~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~ 150 (343)
+.++..++ +.-.++|.|.|+.+|..+|...
T Consensus 20 ~aL~e~gi-~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGL-EPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCC-CceEEEEeCHHHHHHHHHHcCC
Confidence 33444567 5778999999999999999743
No 260
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=60.96 E-value=35 Score=26.70 Aligned_cols=64 Identities=14% Similarity=0.175 Sum_probs=46.4
Q ss_pred Cc-EEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecc----cHHHHHHHHHHhhc-ccceeEEE
Q 019314 89 GI-YIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSM----GGQVVWSCLKYISH-RLTGAALI 160 (343)
Q Consensus 89 g~-~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~----Gg~~a~~~a~~~p~-~v~~lil~ 160 (343)
|. +|+..|.++.. .++.+.+++.+.++++..+. .++++|+|. |..++.++|++..- .+..++-+
T Consensus 76 G~d~V~~~~~~~~~------~~~~e~~a~al~~~i~~~~p--~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 76 GADRAILVSDRAFA------GADTLATAKALAAAIKKIGV--DLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CCCEEEEEeccccc------CCChHHHHHHHHHHHHHhCC--CEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 54 68887765432 35788899999999988774 799999998 88999999987432 34444443
No 261
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=60.38 E-value=9.6 Score=31.68 Aligned_cols=28 Identities=18% Similarity=0.200 Sum_probs=21.7
Q ss_pred HHHHHhC-CCCeEEEEEecccHHHHHHHHH
Q 019314 120 ELADQLG-LGSKFYVVGFSMGGQVVWSCLK 148 (343)
Q Consensus 120 ~~l~~l~-~~~~~~lvG~S~Gg~~a~~~a~ 148 (343)
+.+...+ + .+..++|||+|=..|+.++.
T Consensus 74 ~~l~~~g~i-~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 74 LKLKEQGGL-KPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHcCCC-CCCEEeecCHHHHHHHHHhC
Confidence 4455566 8 69999999999988877663
No 262
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=59.52 E-value=49 Score=25.98 Aligned_cols=62 Identities=19% Similarity=0.232 Sum_probs=36.7
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCc-EEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEE
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGI-YIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFY 132 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~ 132 (343)
+.-.|++.||...++...+.+. +....+.|| .|++.-.-|+. .++++.+-++..++ +++.
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacL------d~~~~~~~f~~v~v~~ve~yP------------~~d~vi~~l~~~~~-~~v~ 197 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACL------DHVLDEYGFDNVFVAAVEGYP------------LVDTVIEYLRKNGI-KEVH 197 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHH------HHHHHhcCCCceEEEEecCCC------------cHHHHHHHHHHcCC-ceEE
Confidence 4457888888887776632222 666666677 56555554442 24455555666666 5655
Q ss_pred EE
Q 019314 133 VV 134 (343)
Q Consensus 133 lv 134 (343)
|+
T Consensus 198 L~ 199 (265)
T COG4822 198 LI 199 (265)
T ss_pred Ee
Confidence 54
No 263
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=59.21 E-value=10 Score=31.96 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=26.6
Q ss_pred HHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHh
Q 019314 117 DIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 117 di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~ 150 (343)
-+.+.++..++ .+-.|.|.|+|+.++..+|..+
T Consensus 28 GVl~aL~e~gi-~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEAGI-PIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHcCC-CccEEEecCHHHHHHHHHHcCC
Confidence 34566666778 6889999999999999999853
No 264
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=58.88 E-value=5.8 Score=35.03 Aligned_cols=38 Identities=13% Similarity=0.013 Sum_probs=27.9
Q ss_pred HHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccce
Q 019314 118 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTG 156 (343)
Q Consensus 118 i~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~ 156 (343)
+...+...++ .+-++.|.|.|+.+|..++.+.++.+..
T Consensus 91 VLkaL~E~gl-~p~vIsGTSaGAivAal~as~~~eel~~ 128 (421)
T cd07230 91 VLKALFEANL-LPRIISGSSAGSIVAAILCTHTDEEIPE 128 (421)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 4444445567 5778999999999999999876665433
No 265
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=57.11 E-value=91 Score=24.26 Aligned_cols=64 Identities=19% Similarity=0.179 Sum_probs=44.4
Q ss_pred CcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhc--ccceeEEE
Q 019314 89 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALI 160 (343)
Q Consensus 89 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~ 160 (343)
++.++.+|-+|.... -.+..+.+..+++.... ..++++=-+..+.-.+..+..+-+ .+.++|+-
T Consensus 83 ~~D~vlIDT~Gr~~~-------d~~~~~el~~~~~~~~~-~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 83 GYDLVLIDTAGRSPR-------DEELLEELKKLLEALNP-DEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp TSSEEEEEE-SSSST-------HHHHHHHHHHHHHHHSS-SEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred CCCEEEEecCCcchh-------hHHHHHHHHHHhhhcCC-ccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 789999999886532 34567778888888866 577777766666667665555433 47888874
No 266
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=56.80 E-value=1.2e+02 Score=25.68 Aligned_cols=103 Identities=16% Similarity=0.150 Sum_probs=59.1
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhh--hHHHHhHcCcEEEEecCCCcccCCCCCC-----------------ccHHH
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLS--FQEVVDELGIYIVSFDRPGYGESDPDPK-----------------RTRKS 113 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~--~~~l~~~~g~~vi~~D~~G~G~S~~~~~-----------------~~~~~ 113 (343)
+.+..|+++-|....-.. +.+.+++ +..|.+..+-+++++--+|.|.-.-... .++..
T Consensus 29 s~k~lV~CfDGT~nrfg~---qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~ 105 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGA---QPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQ 105 (423)
T ss_pred CcceEEEEecCchhhcCC---CCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHH
Confidence 346678888886543222 1122221 1444442377888888889885421110 12222
Q ss_pred -HHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcc
Q 019314 114 -LALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAP 162 (343)
Q Consensus 114 -~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~ 162 (343)
+.+...-++++...+++++++|+|-|+.+|-.+|.. |..+-+++.
T Consensus 106 nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm----ir~vGlls~ 151 (423)
T COG3673 106 NIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM----IRHVGLLSR 151 (423)
T ss_pred HHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH----HHHhhhhcc
Confidence 223334455566666899999999999999888765 444445543
No 267
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=56.35 E-value=15 Score=27.97 Aligned_cols=31 Identities=16% Similarity=0.036 Sum_probs=23.5
Q ss_pred HHHHHhCCCCeEEEEEecccHHHHHHHHHHhh
Q 019314 120 ELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 120 ~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
+.++..++ ..-.+.|.|.|+.+|..++...+
T Consensus 20 ~~L~e~g~-~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGI-EIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCC-CeeEEEEeCHHHHHHHHHHcCCC
Confidence 33445566 57789999999999999887643
No 268
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=55.12 E-value=99 Score=25.58 Aligned_cols=64 Identities=11% Similarity=0.141 Sum_probs=41.7
Q ss_pred CcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEE-EEecccHHHHHHHHHHhhc-ccceeEEE
Q 019314 89 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYV-VGFSMGGQVVWSCLKYISH-RLTGAALI 160 (343)
Q Consensus 89 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~l-vG~S~Gg~~a~~~a~~~p~-~v~~lil~ 160 (343)
++.++.+|-+|....+ .+..+.+.++++.... ..+++ +.-++++.-+...+.++.. .+.++|+.
T Consensus 154 ~~D~ViIDt~Gr~~~~-------~~~l~el~~~~~~~~~-~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 154 RVDYILIDTAGKNYRA-------SETVEEMIETMGQVEP-DYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred CCCEEEEECCCCCcCC-------HHHHHHHHHHHhhhCC-CeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 6899999999875332 2345555566665555 34554 4456788888888877543 57777764
No 269
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=54.39 E-value=8.1 Score=33.99 Aligned_cols=39 Identities=15% Similarity=-0.004 Sum_probs=28.9
Q ss_pred HHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhccccee
Q 019314 118 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGA 157 (343)
Q Consensus 118 i~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~l 157 (343)
+...+...++ .+-++.|.|.|+.+|..++.+.++.+..+
T Consensus 85 VlkaL~e~gl-lp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALLDADL-LPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHhCCC-CCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 3444444467 57789999999999999998766666554
No 270
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=53.70 E-value=1.6e+02 Score=26.00 Aligned_cols=78 Identities=13% Similarity=0.210 Sum_probs=50.9
Q ss_pred HHHHhHcCcEEEEecCCCcccCCCCCCc------------------------cHHHHHHHHHHHHHHh----CCCCeEEE
Q 019314 82 QEVVDELGIYIVSFDRPGYGESDPDPKR------------------------TRKSLALDIEELADQL----GLGSKFYV 133 (343)
Q Consensus 82 ~~l~~~~g~~vi~~D~~G~G~S~~~~~~------------------------~~~~~~~di~~~l~~l----~~~~~~~l 133 (343)
....++.|..|+.+|.-=.|.+....+. .++.+++-...++..+ .+ +-++-
T Consensus 21 ~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~l~~~g~i-~Gvi~ 99 (403)
T PF06792_consen 21 RDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFVSDLYDEGKI-DGVIG 99 (403)
T ss_pred HHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEE
Confidence 3344445999999998655554332211 2233444455555554 35 57889
Q ss_pred EEecccHHHHHHHHHHhhcccceeEEE
Q 019314 134 VGFSMGGQVVWSCLKYISHRLTGAALI 160 (343)
Q Consensus 134 vG~S~Gg~~a~~~a~~~p~~v~~lil~ 160 (343)
+|-|.|..++.......|=-+-++++-
T Consensus 100 ~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 100 IGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred ecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 999999999999998888767776653
No 271
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=53.20 E-value=9.1 Score=33.30 Aligned_cols=40 Identities=13% Similarity=-0.026 Sum_probs=29.6
Q ss_pred HHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccceeE
Q 019314 118 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAA 158 (343)
Q Consensus 118 i~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~li 158 (343)
+...+...++ .+-+|.|.|.|+.+|..+|...++.+..++
T Consensus 101 v~kaL~e~gl-~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGL-LPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCC-CCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 4455555677 577899999999999999996555554443
No 272
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=53.05 E-value=14 Score=33.85 Aligned_cols=36 Identities=17% Similarity=0.272 Sum_probs=28.6
Q ss_pred EEEEEecccHHHHHHHHHHhhc-ccceeEEEcccccc
Q 019314 131 FYVVGFSMGGQVVWSCLKYISH-RLTGAALIAPVINY 166 (343)
Q Consensus 131 ~~lvG~S~Gg~~a~~~a~~~p~-~v~~lil~~~~~~~ 166 (343)
++--+.|-||..+++.|++.-+ .|++++...|.+..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~ 323 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNL 323 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCC
Confidence 4445799999999999987544 69999998887654
No 273
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=52.94 E-value=17 Score=28.81 Aligned_cols=33 Identities=12% Similarity=-0.023 Sum_probs=25.4
Q ss_pred HHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhh
Q 019314 118 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 118 i~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
+.+.+...++ ..-.+.|.|.|+.+|..+|...+
T Consensus 16 vl~aL~e~g~-~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGI-EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCc
Confidence 3444555576 56789999999999999998764
No 274
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=52.37 E-value=9.2 Score=32.12 Aligned_cols=37 Identities=16% Similarity=0.062 Sum_probs=26.5
Q ss_pred HHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcccc
Q 019314 118 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLT 155 (343)
Q Consensus 118 i~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~ 155 (343)
+.+.+...++ .+-++.|.|.|+.+|..++...++.+.
T Consensus 86 VlkaL~e~gl-~p~~i~GsSaGAivaa~~~~~t~~El~ 122 (323)
T cd07231 86 VVRTLVEHQL-LPRVIAGSSVGSIVCAIIATRTDEELQ 122 (323)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 3444444577 577899999999999999876544433
No 275
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=51.20 E-value=26 Score=26.51 Aligned_cols=29 Identities=21% Similarity=0.075 Sum_probs=22.2
Q ss_pred HHHHHhCCCCeEEEEEecccHHHHHHHHHH
Q 019314 120 ELADQLGLGSKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 120 ~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
..++..++ ..-.++|.|.|+.+|..++..
T Consensus 20 ~~L~~~~~-~~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 20 KALEEAGI-PIDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHcCC-CeeEEEEECHHHHHHHHHHcC
Confidence 33444566 467899999999999998864
No 276
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=51.09 E-value=16 Score=27.26 Aligned_cols=49 Identities=22% Similarity=0.405 Sum_probs=29.6
Q ss_pred EEecCCCcccCCCC----CCccHHHHHHHH----HHHHHHhCC---CCeEEEEEecccHH
Q 019314 93 VSFDRPGYGESDPD----PKRTRKSLALDI----EELADQLGL---GSKFYVVGFSMGGQ 141 (343)
Q Consensus 93 i~~D~~G~G~S~~~----~~~~~~~~~~di----~~~l~~l~~---~~~~~lvG~S~Gg~ 141 (343)
+-+-+-|||..... .+++.+++++-+ ..+.+..+. .+++.|+|.|++..
T Consensus 57 ~rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 57 VRWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred ceEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 44555688877322 235888899888 455555432 16899999999987
No 277
>COG0218 Predicted GTPase [General function prediction only]
Probab=50.63 E-value=30 Score=26.85 Aligned_cols=15 Identities=33% Similarity=0.585 Sum_probs=12.6
Q ss_pred EEEecCCCcccCCCC
Q 019314 92 IVSFDRPGYGESDPD 106 (343)
Q Consensus 92 vi~~D~~G~G~S~~~ 106 (343)
+..+|+||+|....+
T Consensus 72 ~~lVDlPGYGyAkv~ 86 (200)
T COG0218 72 LRLVDLPGYGYAKVP 86 (200)
T ss_pred EEEEeCCCcccccCC
Confidence 778999999988654
No 278
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=50.00 E-value=31 Score=21.65 Aligned_cols=33 Identities=12% Similarity=0.008 Sum_probs=21.2
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEe
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSF 95 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~ 95 (343)
.|.++++||....... .++ ...++++|+.++.+
T Consensus 31 ~~~~~lvhGga~~GaD-------~iA-~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGAD-------RIA-ARWARERGVPVIRF 63 (71)
T ss_pred CCCEEEEECCCCCCHH-------HHH-HHHHHHCCCeeEEe
Confidence 3668899997733322 444 67777777766553
No 279
>COG3933 Transcriptional antiterminator [Transcription]
Probab=49.00 E-value=90 Score=27.70 Aligned_cols=76 Identities=11% Similarity=0.176 Sum_probs=57.1
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVV 134 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lv 134 (343)
-..||..||....+. ...++ .+|..+ + -+.++|+| -+.++.+..+.+.+.+++.+. .+=.++
T Consensus 109 v~vIiiAHG~sTASS------maeva-nrLL~~-~-~~~aiDMP--------Ldvsp~~vle~l~e~~k~~~~-~~Glll 170 (470)
T COG3933 109 VKVIIIAHGYSTASS------MAEVA-NRLLGE-E-IFIAIDMP--------LDVSPSDVLEKLKEYLKERDY-RSGLLL 170 (470)
T ss_pred eeEEEEecCcchHHH------HHHHH-HHHhhc-c-ceeeecCC--------CcCCHHHHHHHHHHHHHhcCc-cCceEE
Confidence 457899999876544 44666 788776 2 58899997 345888999999999999887 455666
Q ss_pred EecccHHHHHHHHH
Q 019314 135 GFSMGGQVVWSCLK 148 (343)
Q Consensus 135 G~S~Gg~~a~~~a~ 148 (343)
=..||...++.=..
T Consensus 171 LVDMGSL~~f~~~i 184 (470)
T COG3933 171 LVDMGSLTSFGSII 184 (470)
T ss_pred EEecchHHHHHHHH
Confidence 78999988765443
No 280
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=48.69 E-value=19 Score=25.00 Aligned_cols=60 Identities=20% Similarity=0.212 Sum_probs=36.9
Q ss_pred EEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecC--CCcccCCCCCCc--cHHHHHHHHHHHHHHh
Q 019314 58 HLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDR--PGYGESDPDPKR--TRKSLALDIEELADQL 125 (343)
Q Consensus 58 vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~--~G~G~S~~~~~~--~~~~~~~di~~~l~~l 125 (343)
+|+|.|.++++.+ -++ ..|++..|+.++..|- +-.+........ ......+.+.+.++.+
T Consensus 1 vI~I~G~~gsGKS-------T~a-~~La~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 64 (121)
T PF13207_consen 1 VIIISGPPGSGKS-------TLA-KELAERLGFPVISMDDLIREPGWIERDDDEREYIDADIDLLDDILEQL 64 (121)
T ss_dssp EEEEEESTTSSHH-------HHH-HHHHHHHTCEEEEEHHHHCCGTHCHGCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHH-------HHH-HHHHHHHCCeEEEecceEEeccccccCcchhhHHHHHHHHHHHHHHhh
Confidence 6889999999888 444 7788877999999888 444433221111 1233334445555554
No 281
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=48.64 E-value=37 Score=25.91 Aligned_cols=39 Identities=18% Similarity=0.189 Sum_probs=26.8
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecC
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDR 97 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 97 (343)
.++.+|++-|++++..+ ..=..+. +.|.+ .|++++..|=
T Consensus 21 ~~~~viW~TGLSGsGKS---TiA~ale-~~L~~-~G~~~y~LDG 59 (197)
T COG0529 21 QKGAVIWFTGLSGSGKS---TIANALE-EKLFA-KGYHVYLLDG 59 (197)
T ss_pred CCCeEEEeecCCCCCHH---HHHHHHH-HHHHH-cCCeEEEecC
Confidence 46789999999998877 2111222 44444 4999999984
No 282
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=48.57 E-value=38 Score=21.59 Aligned_cols=23 Identities=22% Similarity=0.180 Sum_probs=19.0
Q ss_pred CeEEEEEecccHHHHHHHHHHhh
Q 019314 129 SKFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
+++.|+|-|.|=.+|.+.++.+.
T Consensus 40 K~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHHC
T ss_pred ceEEEEecCCcccHHHHHHHHhc
Confidence 79999999999999988887763
No 283
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=47.18 E-value=20 Score=32.81 Aligned_cols=31 Identities=23% Similarity=0.562 Sum_probs=24.1
Q ss_pred HHHH-HHhCCCCeEEEEEecccHHHHHHHHHHh
Q 019314 119 EELA-DQLGLGSKFYVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 119 ~~~l-~~l~~~~~~~lvG~S~Gg~~a~~~a~~~ 150 (343)
.+++ +..|+ +|-.++|||+|=..|+..|--.
T Consensus 255 a~ll~~~~GI-~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAI-KPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCC-CCCEEeecCHHHHHHHHHhCCC
Confidence 3445 46789 7999999999998888777543
No 284
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=46.47 E-value=3.7 Score=33.92 Aligned_cols=89 Identities=17% Similarity=0.179 Sum_probs=53.4
Q ss_pred CCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecC----------CCcccCCCCC-Cc--------cHHH
Q 019314 53 PTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDR----------PGYGESDPDP-KR--------TRKS 113 (343)
Q Consensus 53 ~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~----------~G~G~S~~~~-~~--------~~~~ 113 (343)
..-|.+++.||++..... -.... ..+... ++.++..+. +|++.+.... .. ...-
T Consensus 47 ~~~p~v~~~h~~~~~~~~-----~~~~~-~~l~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 119 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQ-----SLGYA-VLLAEK-GYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGV 119 (299)
T ss_pred ccCceEEeccCccccccC-----cchHH-HHhhhc-eeEEeeeccccccccccccccccCccccccccchhheeeecccc
Confidence 357889999999999888 44444 666655 788777764 3332222111 11 1111
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhh
Q 019314 114 LALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 114 ~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
...+....... . .+....|++.|+..+..++...+
T Consensus 120 ~~~~~~~~~~~--~-~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 120 LDKDYRLLGAS--L-GPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred ccHHHHHHhhh--c-CcceEEEEEeeccchHHHhhcch
Confidence 11121111121 2 48889999999999988888776
No 285
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=46.03 E-value=85 Score=26.53 Aligned_cols=63 Identities=14% Similarity=0.072 Sum_probs=41.4
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCC------cccCC------------------CCCCcc
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPG------YGESD------------------PDPKRT 110 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G------~G~S~------------------~~~~~~ 110 (343)
.+.+|+|-|-.+++.. .++ ..|++..+..++..|-.= +|-.. +...++
T Consensus 3 ~~~~i~i~GptgsGKt-------~la-~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s 74 (307)
T PRK00091 3 KPKVIVIVGPTASGKT-------ALA-IELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYS 74 (307)
T ss_pred CceEEEEECCCCcCHH-------HHH-HHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhccc
Confidence 4568999999988877 555 778887777788777631 11111 112246
Q ss_pred HHHHHHHHHHHHHHh
Q 019314 111 RKSLALDIEELADQL 125 (343)
Q Consensus 111 ~~~~~~di~~~l~~l 125 (343)
..++.++....++.+
T Consensus 75 ~~~f~~~a~~~i~~i 89 (307)
T PRK00091 75 VADFQRDALAAIADI 89 (307)
T ss_pred HHHHHHHHHHHHHHH
Confidence 778888888777754
No 286
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=45.57 E-value=32 Score=29.08 Aligned_cols=19 Identities=26% Similarity=0.420 Sum_probs=16.2
Q ss_pred EEEEecccHHHHHHHHHHh
Q 019314 132 YVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 132 ~lvG~S~Gg~~a~~~a~~~ 150 (343)
.+.|.|+||.+|..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5779999999999999743
No 287
>PRK14974 cell division protein FtsY; Provisional
Probab=45.55 E-value=1.4e+02 Score=25.75 Aligned_cols=65 Identities=17% Similarity=0.220 Sum_probs=44.2
Q ss_pred cCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhc--ccceeEEE
Q 019314 88 LGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALI 160 (343)
Q Consensus 88 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~ 160 (343)
.|+.++.+|-.|.... -..+.+.+..+.+.... ..+++|.-+.-|.-+..-+..+.. .+.++|+.
T Consensus 221 ~~~DvVLIDTaGr~~~-------~~~lm~eL~~i~~~~~p-d~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 221 RGIDVVLIDTAGRMHT-------DANLMDELKKIVRVTKP-DLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCCCEEEEECCCccCC-------cHHHHHHHHHHHHhhCC-ceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 3788999998876543 23456666777776666 577788777777777776665532 56777764
No 288
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=44.72 E-value=51 Score=23.10 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=27.0
Q ss_pred EEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcc
Q 019314 59 LNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYG 101 (343)
Q Consensus 59 v~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G 101 (343)
|++||-+|++.. .++ ..+++..++.++-+|..-..
T Consensus 1 ill~G~~G~GKT-------~l~-~~la~~l~~~~~~i~~~~~~ 35 (132)
T PF00004_consen 1 ILLHGPPGTGKT-------TLA-RALAQYLGFPFIEIDGSELI 35 (132)
T ss_dssp EEEESSTTSSHH-------HHH-HHHHHHTTSEEEEEETTHHH
T ss_pred CEEECcCCCCee-------HHH-HHHHhhcccccccccccccc
Confidence 689999988887 344 77777778889999886544
No 289
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=44.71 E-value=1.1e+02 Score=24.66 Aligned_cols=82 Identities=11% Similarity=0.052 Sum_probs=42.7
Q ss_pred CCeEEEecCCCCC--cccchhhhhhhhhhHHHHhHcCcEEEEecCCCcc-----cCCC---CCCc--cHHHHHH--HHHH
Q 019314 55 SLLHLNFHLFNGC--VGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYG-----ESDP---DPKR--TRKSLAL--DIEE 120 (343)
Q Consensus 55 ~~~vv~ihG~~~~--~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G-----~S~~---~~~~--~~~~~~~--di~~ 120 (343)
++.|+||+-.... ... |.... ....++.|+.|..++...-- ..+. .-+. .+-...+ .+.+
T Consensus 31 ~~~v~fIPtAs~~~~~~~-----y~~~~-~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~ 104 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDD-----YTAKV-AEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLA 104 (233)
T ss_pred CCeEEEECCCCCCCCHHH-----HHHHH-HHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHH
Confidence 5789999987744 222 33332 44555569998888775210 0000 0001 1111111 2333
Q ss_pred HHH-HhCCCCeEEEEEecccHHHHH
Q 019314 121 LAD-QLGLGSKFYVVGFSMGGQVVW 144 (343)
Q Consensus 121 ~l~-~l~~~~~~~lvG~S~Gg~~a~ 144 (343)
.|+ .+. +...++|.|.|+.++.
T Consensus 105 ~l~~~~~--~G~~~~G~SAGAii~~ 127 (233)
T PRK05282 105 PIREAVK--NGTPYIGWSAGANVAG 127 (233)
T ss_pred HHHHHHH--CCCEEEEECHHHHhhh
Confidence 333 333 3578999999998854
No 290
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.10 E-value=29 Score=28.49 Aligned_cols=32 Identities=22% Similarity=0.105 Sum_probs=23.2
Q ss_pred HHHHHhCCCC-eEEEEEecccHHHHHHHHHHhhc
Q 019314 120 ELADQLGLGS-KFYVVGFSMGGQVVWSCLKYISH 152 (343)
Q Consensus 120 ~~l~~l~~~~-~~~lvG~S~Gg~~a~~~a~~~p~ 152 (343)
+.+...++ . .=.++|.|.|+.+|..++...+.
T Consensus 18 ~al~e~~~-~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 18 DAFLEAGI-RPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHcCC-CCCCEEEEECHHHHhHHHHHhCCcc
Confidence 33444455 3 44899999999999999987544
No 291
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=43.82 E-value=1.2e+02 Score=27.49 Aligned_cols=88 Identities=17% Similarity=0.135 Sum_probs=58.7
Q ss_pred EEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecc
Q 019314 59 LNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSM 138 (343)
Q Consensus 59 v~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~ 138 (343)
+|--|++.+... ...-+ -..+++.||.|+.+|-.|.-... ..+...+..+++.-.. +.++.||--+
T Consensus 442 lfekGYgkd~a~-----vak~A-I~~a~~~gfDVvLiDTAGR~~~~-------~~lm~~l~k~~~~~~p-d~i~~vgeal 507 (587)
T KOG0781|consen 442 LFEKGYGKDAAG-----VAKEA-IQEARNQGFDVVLIDTAGRMHNN-------APLMTSLAKLIKVNKP-DLILFVGEAL 507 (587)
T ss_pred HHhhhcCCChHH-----HHHHH-HHHHHhcCCCEEEEeccccccCC-------hhHHHHHHHHHhcCCC-ceEEEehhhh
Confidence 455567766655 44444 45566669999999998754332 3466777788887777 5899999887
Q ss_pred cHHHHHHHHHHh---------hcccceeEEE
Q 019314 139 GGQVVWSCLKYI---------SHRLTGAALI 160 (343)
Q Consensus 139 Gg~~a~~~a~~~---------p~~v~~lil~ 160 (343)
=|.=++.-+.++ |..++++++.
T Consensus 508 vg~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 508 VGNDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred hCcHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 777766555443 3346666664
No 292
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=43.27 E-value=2.4e+02 Score=25.02 Aligned_cols=77 Identities=13% Similarity=0.118 Sum_probs=41.2
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc---ccCCCCCCccHHHHHHHHHHHHHHhCC-CCe
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY---GESDPDPKRTRKSLALDIEELADQLGL-GSK 130 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~di~~~l~~l~~-~~~ 130 (343)
+.+||+++... ..+|.......-+ ..|.+. |+.|+-++ +|. |+.....-.+.++.++.+...+...++ +++
T Consensus 116 ~~pvvi~Pamn--~~m~~~p~~~~Nl-~~L~~~-G~~ii~P~-~g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~ 190 (399)
T PRK05579 116 TAPVLVAPAMN--TQMWENPATQRNL-ATLRSR-GVEIIGPA-SGRLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKR 190 (399)
T ss_pred CCCEEEEeCCC--hhHcCCHHHHHHH-HHHHHC-CCEEECCC-CccccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCE
Confidence 45677777553 3342212123333 566654 88877554 343 333333334778888877777644222 246
Q ss_pred EEEEEe
Q 019314 131 FYVVGF 136 (343)
Q Consensus 131 ~~lvG~ 136 (343)
+.|-|-
T Consensus 191 vlITgG 196 (399)
T PRK05579 191 VLITAG 196 (399)
T ss_pred EEEeCC
Confidence 666666
No 293
>PLN02748 tRNA dimethylallyltransferase
Probab=42.72 E-value=1.3e+02 Score=27.29 Aligned_cols=74 Identities=16% Similarity=0.098 Sum_probs=49.1
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecC----CCc--ccC------------------CCCCCcc
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDR----PGY--GES------------------DPDPKRT 110 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~----~G~--G~S------------------~~~~~~~ 110 (343)
.+.+|+|-|-.+++.. .++ ..|+...+..||..|- +|. |-. ++...++
T Consensus 21 ~~~~i~i~GptgsGKs-------~la-~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ys 92 (468)
T PLN02748 21 KAKVVVVMGPTGSGKS-------KLA-VDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFT 92 (468)
T ss_pred CCCEEEEECCCCCCHH-------HHH-HHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCc
Confidence 5668999998888877 555 6788877778888883 332 111 1122468
Q ss_pred HHHHHHHHHHHHHHhC-CCCeEEEEEe
Q 019314 111 RKSLALDIEELADQLG-LGSKFYVVGF 136 (343)
Q Consensus 111 ~~~~~~di~~~l~~l~-~~~~~~lvG~ 136 (343)
..++.++....|+.+. -++..+|||-
T Consensus 93 v~~F~~~A~~~I~~I~~rgk~PIlVGG 119 (468)
T PLN02748 93 AKDFRDHAVPLIEEILSRNGLPVIVGG 119 (468)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEcC
Confidence 8899999888888762 2245566653
No 294
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=42.06 E-value=1.7e+02 Score=26.14 Aligned_cols=48 Identities=21% Similarity=0.236 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcc--cceeEEE
Q 019314 112 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHR--LTGAALI 160 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~lil~ 160 (343)
+++.+.+.++-+.+.. ..+.+|--++=|.-|...|..+-+. +.++|+.
T Consensus 198 e~Lm~El~~Ik~~~~P-~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 198 EELMDELKEIKEVINP-DETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHHHHHHhhcCC-CeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 4677778888888888 6999999999999999999988764 7788875
No 295
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.; GO: 0016740 transferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 2DET_A 2DER_A 2DEU_A 2HMA_A.
Probab=41.75 E-value=23 Score=30.49 Aligned_cols=51 Identities=22% Similarity=0.367 Sum_probs=30.4
Q ss_pred HHHHhHcCcEEEEecCCCcccCCCCC-CccHHHHHHHHHHHHHHhCCCCeEEEE
Q 019314 82 QEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLALDIEELADQLGLGSKFYVV 134 (343)
Q Consensus 82 ~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~di~~~l~~l~~~~~~~lv 134 (343)
..|+++.||.|+.+-++-....+... .-...+-.+|...+.+.|++ +++++
T Consensus 17 A~LLk~~G~~V~Gv~m~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI--p~~v~ 68 (356)
T PF03054_consen 17 AALLKEQGYDVIGVTMRNWDEEDESGKSCCSEEDIEDARRVAEKLGI--PHYVV 68 (356)
T ss_dssp HHHHHHCT-EEEEEEEE-SS-SSSHH-HHHHHHHHHHHHHHHHHHT----EEEE
T ss_pred HHHHHhhcccceEEEEEEeccccccCCCCCchhhHHHHHHHHHhcCC--CEEEE
Confidence 66777779999999888765543211 11234556788888888887 55554
No 296
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=41.64 E-value=6.7 Score=33.04 Aligned_cols=17 Identities=18% Similarity=0.120 Sum_probs=14.7
Q ss_pred CCCCCCcEEEEecCCCC
Q 019314 275 FPNSEGSVHLWQGDEDR 291 (343)
Q Consensus 275 ~~~i~~Pvl~i~G~~D~ 291 (343)
++.|++|+.++....|.
T Consensus 265 ~~~irtP~F~vN~afD~ 281 (402)
T KOG4287|consen 265 LKTIRTPVFLVNAAFDS 281 (402)
T ss_pred HhhcCCceEehhhhhhH
Confidence 78899999999888775
No 297
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=40.27 E-value=65 Score=25.15 Aligned_cols=66 Identities=18% Similarity=0.068 Sum_probs=32.7
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHH
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQ 124 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~ 124 (343)
..++++++||.......... =..+. ..|.+. |..+-..-+++.|..-..+ ....++.+.+.++++.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~--s~~~~-~~L~~~-g~~~~~~~~p~~gH~~~~~-~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQ--SLRLY-NALRKA-GKPVELLIFPGEGHGFGNP-ENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHH--HHHHH-HHHHHT-TSSEEEEEETT-SSSTTSH-HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHH--HHHHH-HHHHhc-CCCEEEEEcCcCCCCCCCc-hhHHHHHHHHHHHHHH
Confidence 36899999998765443111 11232 455543 6555555445444321111 1233555566666654
No 298
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=39.81 E-value=33 Score=27.58 Aligned_cols=40 Identities=10% Similarity=-0.164 Sum_probs=25.1
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEe
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSF 95 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~ 95 (343)
+++.|++.+|.+.....|....|..++ ..+.++ ++.|+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~-~~l~~~-~~~vvl~ 143 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELI-ERLKER-GYRVVLL 143 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHH-HHHCCC-T-EEEE-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHH-HHHHhh-CceEEEE
Confidence 467888888988877777777788887 777765 5777655
No 299
>PRK10867 signal recognition particle protein; Provisional
Probab=39.13 E-value=2.9e+02 Score=24.83 Aligned_cols=65 Identities=25% Similarity=0.270 Sum_probs=41.3
Q ss_pred HcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhc--ccceeEE
Q 019314 87 ELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAAL 159 (343)
Q Consensus 87 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil 159 (343)
..+|.++.+|-+|....+ +...+.+..+.+.... ..+++|.-++-|.-+...|..+-+ .+.++|+
T Consensus 181 ~~~~DvVIIDTaGrl~~d-------~~lm~eL~~i~~~v~p-~evllVlda~~gq~av~~a~~F~~~~~i~giIl 247 (433)
T PRK10867 181 ENGYDVVIVDTAGRLHID-------EELMDELKAIKAAVNP-DEILLVVDAMTGQDAVNTAKAFNEALGLTGVIL 247 (433)
T ss_pred hcCCCEEEEeCCCCcccC-------HHHHHHHHHHHHhhCC-CeEEEEEecccHHHHHHHHHHHHhhCCCCEEEE
Confidence 337999999999875332 2345555555555555 466777666666667776765543 3566666
No 300
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=39.07 E-value=1.8e+02 Score=22.90 Aligned_cols=83 Identities=11% Similarity=0.084 Sum_probs=45.9
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHc-CcEEEEecCCCcccCC-C----C------CCccHHHHHH-----
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDEL-GIYIVSFDRPGYGESD-P----D------PKRTRKSLAL----- 116 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~-~----~------~~~~~~~~~~----- 116 (343)
..+.|++|+-.+..... +.... ....++. |+.+..++... ..+ . . ++-+...+.+
T Consensus 30 ~~~~i~~IptAs~~~~~-----~~~~~-~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~ 101 (212)
T cd03146 30 ARPKVLFVPTASGDRDE-----YTARF-YAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREH 101 (212)
T ss_pred CCCeEEEECCCCCCHHH-----HHHHH-HHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHc
Confidence 36789999877775444 33332 5555667 88888887644 111 0 0 0012222222
Q ss_pred HHHHHHHHhCCCCeEEEEEecccHHHHHH
Q 019314 117 DIEELADQLGLGSKFYVVGFSMGGQVVWS 145 (343)
Q Consensus 117 di~~~l~~l~~~~~~~lvG~S~Gg~~a~~ 145 (343)
.+.+.++..-. +...++|.|.|+++...
T Consensus 102 ~l~~~l~~~~~-~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 102 GLDAILKAALE-RGVVYIGWSAGSNCWFP 129 (212)
T ss_pred CHHHHHHHHHH-CCCEEEEECHhHHhhCC
Confidence 13334443222 46789999999988754
No 301
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=39.06 E-value=96 Score=26.94 Aligned_cols=62 Identities=15% Similarity=0.082 Sum_probs=38.8
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEE
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYV 133 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~l 133 (343)
+...+|.+.|+-.|+.. ..++.+.|+.|+++.+....... ..+..+++..+.+.+++ +..+
T Consensus 5 ~~kVlValSGGVDSsva-----------a~LL~~~G~~V~~v~~~~~~~~~------~~~d~~~a~~va~~LgI--p~~v 65 (360)
T PRK14665 5 NKRVLLGMSGGTDSSVA-----------AMLLLEAGYEVTGVTFRFYEFNG------STEYLEDARALAERLGI--GHIT 65 (360)
T ss_pred CCEEEEEEcCCHHHHHH-----------HHHHHHcCCeEEEEEEecCCCCC------ChHHHHHHHHHHHHhCC--CEEE
Confidence 35678888887776655 44555558999887765432111 12346677788888887 4444
Q ss_pred E
Q 019314 134 V 134 (343)
Q Consensus 134 v 134 (343)
+
T Consensus 66 v 66 (360)
T PRK14665 66 Y 66 (360)
T ss_pred E
Confidence 4
No 302
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=38.84 E-value=1.6e+02 Score=26.39 Aligned_cols=64 Identities=16% Similarity=0.133 Sum_probs=44.3
Q ss_pred CcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhc--ccceeEEE
Q 019314 89 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALI 160 (343)
Q Consensus 89 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~ 160 (343)
+|.++.+|-+|.-.. -+.+.+.+..+.+.... ..+++|--++-|.-+...|..+-+ .+.++|+-
T Consensus 182 ~~DvViIDTaGr~~~-------d~~lm~El~~i~~~~~p-~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 182 NFDIIIVDTSGRHKQ-------EDSLFEEMLQVAEAIQP-DNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred CCCEEEEECCCCCcc-------hHHHHHHHHHHhhhcCC-cEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 688999999875322 23455666666666666 578888888888777777776644 46777764
No 303
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=38.52 E-value=40 Score=27.67 Aligned_cols=22 Identities=18% Similarity=0.404 Sum_probs=15.3
Q ss_pred HHHHHh-CCCCeEEEEEecccHHH
Q 019314 120 ELADQL-GLGSKFYVVGFSMGGQV 142 (343)
Q Consensus 120 ~~l~~l-~~~~~~~lvG~S~Gg~~ 142 (343)
.+.+.+ ++ ..++++|||+|..=
T Consensus 226 ~~~~~l~~i-~~I~i~GhSl~~~D 248 (270)
T PF14253_consen 226 SFFESLSDI-DEIIIYGHSLGEVD 248 (270)
T ss_pred HHHhhhcCC-CEEEEEeCCCchhh
Confidence 334444 45 69999999999753
No 304
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=38.35 E-value=57 Score=27.65 Aligned_cols=38 Identities=11% Similarity=-0.102 Sum_probs=19.9
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEE
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVS 94 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~ 94 (343)
++.|+++||.......|....|..++ ..+.++ |++|+.
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li-~~l~~~-~~~ivl 215 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELI-GLLAPS-GLRIKL 215 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHH-HHHHHC-CCeEEE
Confidence 34455566655444455555565665 555433 555543
No 305
>PRK02399 hypothetical protein; Provisional
Probab=38.30 E-value=2.8e+02 Score=24.51 Aligned_cols=94 Identities=16% Similarity=0.262 Sum_probs=56.2
Q ss_pred EEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCC------------------------ccHHHH
Q 019314 59 LNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPK------------------------RTRKSL 114 (343)
Q Consensus 59 v~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~------------------------~~~~~~ 114 (343)
|+|=|...+... . ..-+ .....+.|..|+.+|.-..|....+.+ ..++.+
T Consensus 6 I~iigT~DTK~~---E-~~yl--~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M 79 (406)
T PRK02399 6 IYIAGTLDTKGE---E-LAYV--KDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAM 79 (406)
T ss_pred EEEEeccCCcHH---H-HHHH--HHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHH
Confidence 444455555544 1 1112 344444589999999854442211110 122344
Q ss_pred HHHHHHHHHHh----CCCCeEEEEEecccHHHHHHHHHHhhcccceeEE
Q 019314 115 ALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAAL 159 (343)
Q Consensus 115 ~~di~~~l~~l----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil 159 (343)
++-...+++.| ++ +-++-+|-|.|..++.......|=-+-++++
T Consensus 80 ~~ga~~~v~~L~~~g~i-~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 80 AEGAAAFVRELYERGDV-AGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHHHHHHHhcCCc-cEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 55555555543 36 5789999999999999999888866666654
No 306
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=38.15 E-value=1.3e+02 Score=25.11 Aligned_cols=69 Identities=16% Similarity=0.251 Sum_probs=43.1
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc--------c-------cCCCCCCc-cHHHHHHHH
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY--------G-------ESDPDPKR-TRKSLALDI 118 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~--------G-------~S~~~~~~-~~~~~~~di 118 (343)
-|-|+|..|.++. +++++.. ||.|+..||--- | .-++..-| +.+.+.+.+
T Consensus 252 vPmi~fakG~g~~-------------Le~l~~t-G~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v 317 (359)
T KOG2872|consen 252 VPMILFAKGSGGA-------------LEELAQT-GYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLV 317 (359)
T ss_pred CceEEEEcCcchH-------------HHHHHhc-CCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHH
Confidence 4778888775432 2777776 999999998421 1 11111112 667788888
Q ss_pred HHHHHHhCCCCeEEEEEec
Q 019314 119 EELADQLGLGSKFYVVGFS 137 (343)
Q Consensus 119 ~~~l~~l~~~~~~~lvG~S 137 (343)
.+.++..|.+.-+.=+||.
T Consensus 318 ~~mv~~fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 318 KQMVKDFGKSRYIANLGHG 336 (359)
T ss_pred HHHHHHhCccceEEecCCC
Confidence 8999988863233334654
No 307
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=38.09 E-value=1.3e+02 Score=25.42 Aligned_cols=62 Identities=8% Similarity=-0.009 Sum_probs=35.2
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCC-CccHHHHHHHHHHHHHHhCC
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLALDIEELADQLGL 127 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~di~~~l~~l~~ 127 (343)
..++|.+.|+-.++.. ..|++..||.|..+-++..-.-+... .-..+.-.+|...+.++|++
T Consensus 6 ~~VvvamSgGVDSsVa-----------a~Ll~~~g~~v~gv~M~nWd~~de~~s~cp~e~D~~da~~Vc~~LnI 68 (377)
T KOG2805|consen 6 DRVVVAMSGGVDSSVA-----------ARLLAARGYNVTGVFMKNWDSLDEFGSQCPAERDWKDAKRVCKQLNI 68 (377)
T ss_pred ceEEEEecCCchHHHH-----------HHHHHhcCCCeeEEeeeccccccccccCCCchhhHHHHHHHHHHhCC
Confidence 4466777666655544 66666679999888877662222111 12334444555555555544
No 308
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=37.84 E-value=2.1e+02 Score=24.49 Aligned_cols=118 Identities=11% Similarity=0.020 Sum_probs=62.1
Q ss_pred eeeecCccEEEEEeccC----CCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHc--CcEEEEecCCCcccCC----
Q 019314 35 LLQQTSHQYLKFLNSIE----YPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDEL--GIYIVSFDRPGYGESD---- 104 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~----~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~--g~~vi~~D~~G~G~S~---- 104 (343)
++.+..+-..||...|+ +..+.+=+|+||.|..... ..+ .++.++. +..|+..|.-+.---+
T Consensus 187 Qf~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGTi------tgv--GRylke~~~~~kVv~vdp~~S~~~~~~~~ 258 (362)
T KOG1252|consen 187 QFHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGTI------TGV--GRYLKEQNPNIKVVGVDPQESIVLSGGKP 258 (362)
T ss_pred HhcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCcee------ech--hHHHHHhCCCCEEEEeCCCcceeccCCCC
Confidence 55667777799988886 3345666888887755544 112 3333333 4778888865421111
Q ss_pred CC--C-----Cc----------cHHHHHH----HHHHHHHHhCCCCeEEEEEecccHHHHHHHH-HHhhcccceeEEEc
Q 019314 105 PD--P-----KR----------TRKSLAL----DIEELADQLGLGSKFYVVGFSMGGQVVWSCL-KYISHRLTGAALIA 161 (343)
Q Consensus 105 ~~--~-----~~----------~~~~~~~----di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a-~~~p~~v~~lil~~ 161 (343)
.+ . ++ .+++++. +.......+.. +.=+++|-|.|+.++..+- ++.|+.-..+|.+-
T Consensus 259 g~~~~~I~GIGyg~~p~~ld~~~vd~~~~~~~d~A~~~Ar~La~-eeGll~G~SSGan~~aAl~~a~~~en~~kliV~~ 336 (362)
T KOG1252|consen 259 GPTFHKIQGIGYGFIPTTLDTKLVDEVLKVSSDEAIEMARRLAL-EEGLLVGISSGANVAAALKLAKRPENAGKLIVVT 336 (362)
T ss_pred CCCccceeccccCcCccccchHHHHHHHHhCCHHHHHHHHHHHH-hhCeeecccchHHHHHHHHHHhccccCCcEEEEE
Confidence 11 0 00 1122211 11112223333 4668999999998754332 23465555555554
No 309
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=37.18 E-value=2.3e+02 Score=25.00 Aligned_cols=76 Identities=11% Similarity=0.026 Sum_probs=39.7
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc--ccCCCCCCccHHHHHHHHHHHHHH---hCCCCe
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY--GESDPDPKRTRKSLALDIEELADQ---LGLGSK 130 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~--G~S~~~~~~~~~~~~~di~~~l~~---l~~~~~ 130 (343)
.++|+++-.... +|.......-+ ..|.+. |+.|+-+..--+ |+.......+++++++.+...+.. +.- ++
T Consensus 113 ~plviaPamn~~--m~~~p~~~~Nl-~~L~~~-G~~vv~P~~g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~~-~~ 187 (390)
T TIGR00521 113 APIILAPAMNEN--MYNNPAVQENI-KRLKDD-GYIFIEPDSGLLACGDEGKGRLAEPETIVKAAEREFSPKEDLEG-KR 187 (390)
T ss_pred CCEEEEeCCChh--hcCCHHHHHHH-HHHHHC-CcEEECCCCcccccccccCCCCCCHHHHHHHHHHHHhhccccCC-ce
Confidence 467777764322 31111123333 566654 877665553222 443333345778888887777654 332 56
Q ss_pred EEEEEe
Q 019314 131 FYVVGF 136 (343)
Q Consensus 131 ~~lvG~ 136 (343)
+.+.|-
T Consensus 188 vlit~g 193 (390)
T TIGR00521 188 VLITAG 193 (390)
T ss_pred EEEecC
Confidence 666665
No 310
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=37.07 E-value=1.2e+02 Score=23.25 Aligned_cols=64 Identities=11% Similarity=0.082 Sum_probs=34.0
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc---ccCCCCCCccHHHHHHHHHHHHH
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY---GESDPDPKRTRKSLALDIEELAD 123 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~di~~~l~ 123 (343)
+.+||+++-.. ..+|.....+.-+ ..|.+. |+.|+-+. +|+ |+.......+++++++.+...++
T Consensus 113 ~~pvvi~Pamn--~~m~~~p~~~~Nl-~~L~~~-G~~vi~p~-~g~la~~~~g~g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPAMN--TKMYENPATQRNL-KTLKED-GVQEIEPK-EGLLACGDEGYGALADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEECCC--HHHhcCHHHHHHH-HHHHHC-CCEEECCC-CCccccCCccCCCCCCHHHHHHHHHHHhc
Confidence 45677777432 2332222233343 566654 88777666 444 44433333467777766666543
No 311
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=37.05 E-value=36 Score=27.01 Aligned_cols=31 Identities=10% Similarity=-0.092 Sum_probs=23.0
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCC
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRP 98 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 98 (343)
+.=||++|-|-+... ..|+++ ||+|+.+|+-
T Consensus 38 ~~rvLvPgCG~g~D~-----------~~La~~-G~~VvGvDls 68 (218)
T PF05724_consen 38 GGRVLVPGCGKGYDM-----------LWLAEQ-GHDVVGVDLS 68 (218)
T ss_dssp SEEEEETTTTTSCHH-----------HHHHHT-TEEEEEEES-
T ss_pred CCeEEEeCCCChHHH-----------HHHHHC-CCeEEEEecC
Confidence 345888888877655 566665 9999999983
No 312
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=36.95 E-value=47 Score=26.71 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=23.5
Q ss_pred HHHHHHHhCCC-CeEEEEEecccHHHHHHHHHHhh
Q 019314 118 IEELADQLGLG-SKFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 118 i~~~l~~l~~~-~~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
+.+.+...++. +.-.++|.|.|+.++..++...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 34444445551 13479999999999999998643
No 313
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=36.85 E-value=37 Score=28.41 Aligned_cols=34 Identities=18% Similarity=-0.018 Sum_probs=24.2
Q ss_pred HHHHHhCCCCeEEEEEecccHHHHHHHHHHhhccc
Q 019314 120 ELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRL 154 (343)
Q Consensus 120 ~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v 154 (343)
+.+...++ .+-++.|.|.|+.+|..++....+.+
T Consensus 89 ~aL~e~~l-~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 89 KALWEQDL-LPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHcCC-CCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 33334466 46789999999999999997543333
No 314
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=36.67 E-value=43 Score=30.10 Aligned_cols=55 Identities=13% Similarity=0.105 Sum_probs=37.8
Q ss_pred EEEEecCCCCCCChhHHHHHhhcC------CC-ceEEEcCCCCCccccC-cchHHHHHHHHHcc
Q 019314 282 VHLWQGDEDRLVPVILQRYISKKL------PW-IRYHEIPGSGHLIADA-DGMTEAIIKALLLG 337 (343)
Q Consensus 282 vl~i~G~~D~~~~~~~~~~~~~~~------~~-~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 337 (343)
++..+|=.|..+|+.....-.+.. ++ ..+.+++ +||+++.+ |+...+.+..|+..
T Consensus 428 w~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~-aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 428 WLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYE-AGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred EeeecchhhhcCCCcccccchhhcccccccCCceEEEEec-CcceeecCChHHHHHHHHHHHhh
Confidence 777777778777765442222222 22 3456665 79999997 99999999988865
No 315
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=35.31 E-value=81 Score=26.13 Aligned_cols=49 Identities=20% Similarity=0.223 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhC--CCCeEEEEEecccHHHHHHHHH---HhhcccceeEEEccc
Q 019314 115 ALDIEELADQLG--LGSKFYVVGFSMGGQVVWSCLK---YISHRLTGAALIAPV 163 (343)
Q Consensus 115 ~~di~~~l~~l~--~~~~~~lvG~S~Gg~~a~~~a~---~~p~~v~~lil~~~~ 163 (343)
.+.+.+-++.+- -..+++|.|-|+|+.-+...-. ..-+++++.+.++|.
T Consensus 93 ~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP 146 (289)
T PF10081_consen 93 FEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPP 146 (289)
T ss_pred HHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCC
Confidence 333444444442 1258999999999876654432 233479999999885
No 316
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=35.24 E-value=2e+02 Score=22.79 Aligned_cols=39 Identities=5% Similarity=-0.067 Sum_probs=24.1
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecC
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDR 97 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 97 (343)
++.|.||+-.+.+... ..|-.-. ....+..|+.+.-+++
T Consensus 32 ~~~i~FIPtAs~~~~~---~~Yv~k~-~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSED---DFYVEKV-RNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccch---HHHHHHH-HHHHHHcCCeeeeeec
Confidence 6689999988777654 1122221 3444455888877776
No 317
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=34.70 E-value=1.1e+02 Score=28.33 Aligned_cols=47 Identities=9% Similarity=0.364 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEe------cccHHHHHHHHHHhhcccceeEEEccc
Q 019314 113 SLALDIEELADQLGLGSKFYVVGF------SMGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 113 ~~~~di~~~l~~l~~~~~~~lvG~------S~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
.+...+.+.+.. . ++++++|| +.|+.+++..-+..-.+ .+.+.++|.
T Consensus 325 vis~al~d~i~e--~-d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 325 VISTALSDIIKE--S-DNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHhh--c-CcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 333444444444 3 69999999 78999998776655444 677778764
No 318
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=34.49 E-value=1.1e+02 Score=25.50 Aligned_cols=49 Identities=18% Similarity=0.340 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHhCC--CCeEEEEEecccHHHHHHHHHHhhcccceeEEEc
Q 019314 112 KSLALDIEELADQLGL--GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIA 161 (343)
Q Consensus 112 ~~~~~di~~~l~~l~~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~ 161 (343)
+.+..-+..+++.+++ +..+.=||.++|++ ++.+|.++..+|-++.+-.
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l-~~~aA~~y~v~V~GvTlS~ 105 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGWGGL-AIYAAEEYGVTVVGVTLSE 105 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCChhHH-HHHHHHHcCCEEEEeeCCH
Confidence 3455667777888765 35677789999985 5567777766777766544
No 319
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=33.59 E-value=1.3e+02 Score=23.20 Aligned_cols=35 Identities=29% Similarity=0.513 Sum_probs=19.6
Q ss_pred EEEecCCCcccCCCCCC----ccHHH----HHHHHHHHHHHhCC
Q 019314 92 IVSFDRPGYGESDPDPK----RTRKS----LALDIEELADQLGL 127 (343)
Q Consensus 92 vi~~D~~G~G~S~~~~~----~~~~~----~~~di~~~l~~l~~ 127 (343)
+|++| ||||..++... ..-.+ ++.-+...|+..|.
T Consensus 2 ~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~ 44 (189)
T TIGR02883 2 IIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGA 44 (189)
T ss_pred EEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCC
Confidence 67777 79998874321 12223 44445555555554
No 320
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=33.59 E-value=40 Score=30.06 Aligned_cols=38 Identities=18% Similarity=0.106 Sum_probs=23.9
Q ss_pred EEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCcccc
Q 019314 282 VHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIAD 322 (343)
Q Consensus 282 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 322 (343)
|++++|+.|++........ .-.....+++||++|+.-+
T Consensus 379 viFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 379 VIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp EEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTGGG
T ss_pred EEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeeccc
Confidence 9999999999987652222 1234556789999998755
No 321
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=33.32 E-value=68 Score=23.92 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=24.2
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecC
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDR 97 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 97 (343)
++.+|++-|.+++... ..=+.+. ..|.+. |+.|+.+|-
T Consensus 1 ~g~vIwltGlsGsGKt---TlA~~L~-~~L~~~-g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKT---TLARALE-RRLFAR-GIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHH---HHHHHHH-HHHHHT-TS-EEEEEH
T ss_pred CCEEEEEECCCCCCHH---HHHHHHH-HHHHHc-CCcEEEecC
Confidence 3679999999998877 2222332 444444 899999874
No 322
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=33.23 E-value=77 Score=26.77 Aligned_cols=39 Identities=13% Similarity=0.006 Sum_probs=23.1
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEe
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSF 95 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~ 95 (343)
++.|++.||.......|....|..++ ..+.++ |+.++..
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~-~~l~~~-~~~~vl~ 217 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELA-RLLLAR-GLQIVLP 217 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHH-HHHHHC-CCeEEEe
Confidence 45666677666655566555566665 666543 5665543
No 323
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=33.17 E-value=1.2e+02 Score=28.06 Aligned_cols=37 Identities=16% Similarity=0.051 Sum_probs=27.5
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCC
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRP 98 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 98 (343)
..|.||++.|.++++.+ .++ ..++...||.++..|..
T Consensus 367 ~~p~LVil~G~pGSGKS-------T~A-~~l~~~~g~~~vn~D~l 403 (526)
T TIGR01663 367 APCEMVIAVGFPGAGKS-------HFC-KKFFQPAGYKHVNADTL 403 (526)
T ss_pred CCceEEEEECCCCCCHH-------HHH-HHHHHHcCCeEECcHHH
Confidence 46889999999999888 222 55666568888877764
No 324
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=33.04 E-value=60 Score=28.00 Aligned_cols=33 Identities=9% Similarity=0.061 Sum_probs=24.2
Q ss_pred eeeecCccEEEEEeccC----------CCCCCeEEEecCCCCC
Q 019314 35 LLQQTSHQYLKFLNSIE----------YPTSLLHLNFHLFNGC 67 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~----------~~~~~~vv~ihG~~~~ 67 (343)
+....||.++-|.+.|. .-.+|.|+++|-+...
T Consensus 455 kmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLSA 497 (506)
T KOG3551|consen 455 KMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLSA 497 (506)
T ss_pred ccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhhh
Confidence 44667899999999984 1246888888877644
No 325
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=32.06 E-value=73 Score=22.41 Aligned_cols=31 Identities=23% Similarity=0.308 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEecccHHHHH
Q 019314 113 SLALDIEELADQLGLGSKFYVVGFSMGGQVVW 144 (343)
Q Consensus 113 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~ 144 (343)
+....+...+..++. +.++++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v-~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGV-KHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCC-CEEEEEccCCCcHHHH
Confidence 466778888899999 7999999976665553
No 326
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=31.77 E-value=1.4e+02 Score=24.83 Aligned_cols=83 Identities=20% Similarity=0.226 Sum_probs=46.1
Q ss_pred eEEEecCCCCCcccchhhhhhhhhhHHHHhHcCc-------EEEEecCCCcccCCCCC-CccHHHHH--------HHHHH
Q 019314 57 LHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGI-------YIVSFDRPGYGESDPDP-KRTRKSLA--------LDIEE 120 (343)
Q Consensus 57 ~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~-------~vi~~D~~G~G~S~~~~-~~~~~~~~--------~di~~ 120 (343)
.-|++.|.|..... -..++...+.++ |. +++.+|..|-=..+... ...-..++ .++.+
T Consensus 26 ~~iv~~GAGsAg~g-----ia~ll~~~~~~~-G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e 99 (279)
T cd05312 26 QRILFLGAGSAGIG-----IADLIVSAMVRE-GLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLE 99 (279)
T ss_pred cEEEEECcCHHHHH-----HHHHHHHHHHHc-CCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHH
Confidence 34566676655554 333331333333 65 89999999854333221 11111222 35666
Q ss_pred HHHHhCCCCeEEEEEecc-cHHHHHHHHH
Q 019314 121 LADQLGLGSKFYVVGFSM-GGQVVWSCLK 148 (343)
Q Consensus 121 ~l~~l~~~~~~~lvG~S~-Gg~~a~~~a~ 148 (343)
+++.+ ++-++||.|- ||.+.-.+..
T Consensus 100 ~i~~v---~ptvlIG~S~~~g~ft~evv~ 125 (279)
T cd05312 100 VVKAV---KPTVLIGLSGVGGAFTEEVVR 125 (279)
T ss_pred HHHhc---CCCEEEEeCCCCCCCCHHHHH
Confidence 66665 4669999995 7766655544
No 327
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=31.68 E-value=69 Score=25.94 Aligned_cols=20 Identities=30% Similarity=0.232 Sum_probs=17.7
Q ss_pred EEEEecccHHHHHHHHHHhh
Q 019314 132 YVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 132 ~lvG~S~Gg~~a~~~a~~~p 151 (343)
.++|.|.|+.+|..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998643
No 328
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=31.63 E-value=73 Score=17.85 Aligned_cols=33 Identities=18% Similarity=0.030 Sum_probs=22.6
Q ss_pred cCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHH
Q 019314 88 LGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQ 124 (343)
Q Consensus 88 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~ 124 (343)
.+|.+.++|+||.- ..+.+.++..+.+.+.+..
T Consensus 12 ~~y~~~~pdlpg~~----t~G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 12 GGYVAYFPDLPGCF----TQGDTLEEALENAKEALEL 44 (48)
T ss_dssp SSEEEEETTCCTCE----EEESSHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChh----hcCCCHHHHHHHHHHHHHH
Confidence 37899999999864 1224677777777666653
No 329
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=31.25 E-value=82 Score=26.96 Aligned_cols=39 Identities=15% Similarity=0.103 Sum_probs=21.9
Q ss_pred CCeEEEecC-CCCCcccchhhhhhhhhhHHHHhHcCcEEEEe
Q 019314 55 SLLHLNFHL-FNGCVGSLNFTVLACLSFQEVVDELGIYIVSF 95 (343)
Q Consensus 55 ~~~vv~ihG-~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~ 95 (343)
++.|++.|| ..+....|....|..++ +.+.++ |+.|+.+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~-~~l~~~-~~~Vvl~ 214 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELA-ELLIAK-GYQVVLF 214 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHH-HHHHHC-CCEEEEe
Confidence 356666666 33355555555566665 555554 4555554
No 330
>PRK00131 aroK shikimate kinase; Reviewed
Probab=31.18 E-value=56 Score=24.40 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=26.3
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecC
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDR 97 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 97 (343)
.+.+|++.|.++++.. .++ ..|++..|+.++-.|.
T Consensus 3 ~~~~i~l~G~~GsGKs-------tla-~~La~~l~~~~~d~d~ 37 (175)
T PRK00131 3 KGPNIVLIGFMGAGKS-------TIG-RLLAKRLGYDFIDTDH 37 (175)
T ss_pred CCCeEEEEcCCCCCHH-------HHH-HHHHHHhCCCEEEChH
Confidence 3568999999999888 444 7788877887776654
No 331
>PLN02840 tRNA dimethylallyltransferase
Probab=30.66 E-value=2.7e+02 Score=24.84 Aligned_cols=74 Identities=20% Similarity=0.137 Sum_probs=47.0
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCC----Cc--ccCC------------------CCCCcc
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRP----GY--GESD------------------PDPKRT 110 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~--G~S~------------------~~~~~~ 110 (343)
...+|+|-|-.+++.. .++ ..|++..+..++..|-. |. |-.. +...++
T Consensus 20 ~~~vi~I~GptgsGKT-------tla-~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~yS 91 (421)
T PLN02840 20 KEKVIVISGPTGAGKS-------RLA-LELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYS 91 (421)
T ss_pred CCeEEEEECCCCCCHH-------HHH-HHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCcee
Confidence 4568888888888877 454 67777766677777753 22 1111 112357
Q ss_pred HHHHHHHHHHHHHHhC-CCCeEEEEEe
Q 019314 111 RKSLALDIEELADQLG-LGSKFYVVGF 136 (343)
Q Consensus 111 ~~~~~~di~~~l~~l~-~~~~~~lvG~ 136 (343)
..++.++....++.+. -++..+|+|-
T Consensus 92 v~~F~~~A~~~I~~i~~rgkiPIvVGG 118 (421)
T PLN02840 92 VGAFFDDARRATQDILNRGRVPIVAGG 118 (421)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 8889999888888762 2234556653
No 332
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.54 E-value=3.5e+02 Score=23.94 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=36.4
Q ss_pred CcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhcc--cceeEE
Q 019314 89 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHR--LTGAAL 159 (343)
Q Consensus 89 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~lil 159 (343)
+|.||.+|-.|.-. .-..+-+.+.++.+.+.. +.+++|=.+.=|..|..-|..+.+. |.++|+
T Consensus 183 ~fdvIIvDTSGRh~-------qe~sLfeEM~~v~~ai~P-d~vi~VmDasiGQaae~Qa~aFk~~vdvg~vIl 247 (483)
T KOG0780|consen 183 NFDVIIVDTSGRHK-------QEASLFEEMKQVSKAIKP-DEIIFVMDASIGQAAEAQARAFKETVDVGAVIL 247 (483)
T ss_pred CCcEEEEeCCCchh-------hhHHHHHHHHHHHhhcCC-CeEEEEEeccccHhHHHHHHHHHHhhccceEEE
Confidence 57777777655321 233455666666777776 4666665555556665555555442 445554
No 333
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=30.28 E-value=1e+02 Score=16.93 Aligned_cols=32 Identities=22% Similarity=0.298 Sum_probs=22.1
Q ss_pred cEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEE
Q 019314 90 IYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVV 134 (343)
Q Consensus 90 ~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lv 134 (343)
.+|..+|+-||+. .+++..+++.++. ++++++
T Consensus 7 a~v~~~~fSgHad------------~~~L~~~i~~~~p-~~vilV 38 (43)
T PF07521_consen 7 ARVEQIDFSGHAD------------REELLEFIEQLNP-RKVILV 38 (43)
T ss_dssp SEEEESGCSSS-B------------HHHHHHHHHHHCS-SEEEEE
T ss_pred EEEEEEeecCCCC------------HHHHHHHHHhcCC-CEEEEe
Confidence 4677888777753 4778888888865 566554
No 334
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=29.07 E-value=89 Score=25.89 Aligned_cols=49 Identities=24% Similarity=0.410 Sum_probs=28.5
Q ss_pred cHHH-HHHHHHHHHHHhCC--CCeEEEEEecccHHHHHHHHHHhhcccceeEE
Q 019314 110 TRKS-LALDIEELADQLGL--GSKFYVVGFSMGGQVVWSCLKYISHRLTGAAL 159 (343)
Q Consensus 110 ~~~~-~~~di~~~l~~l~~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil 159 (343)
++++ +.+-+..+++.+++ +.++.=+|..+||. +..+|.++.-+|.++.+
T Consensus 42 ~Le~AQ~~k~~~~~~~~~l~~G~~vLDiGcGwG~~-~~~~a~~~g~~v~gitl 93 (273)
T PF02353_consen 42 TLEEAQERKLDLLCEKLGLKPGDRVLDIGCGWGGL-AIYAAERYGCHVTGITL 93 (273)
T ss_dssp -HHHHHHHHHHHHHTTTT--TT-EEEEES-TTSHH-HHHHHHHH--EEEEEES
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCEEEEeCCCccHH-HHHHHHHcCcEEEEEEC
Confidence 4433 34456667777654 46899999999985 55677777555666554
No 335
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=29.07 E-value=3.3e+02 Score=22.42 Aligned_cols=72 Identities=13% Similarity=0.122 Sum_probs=42.7
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCc-EEEEecCCCcccCCC--CCCccHHHHHHHHHHHHHHhCCCCe
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGI-YIVSFDRPGYGESDP--DPKRTRKSLALDIEELADQLGLGSK 130 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~-~vi~~D~~G~G~S~~--~~~~~~~~~~~di~~~l~~l~~~~~ 130 (343)
.+.+|++--|..++... |...+ +.+.+. |- +++..+. |. |.- .+...++ ...+..+-+..+. +
T Consensus 131 ~gkPVilk~G~~~t~~e-----~~~Av-e~i~~~-Gn~~i~l~~r-G~--s~y~~~~~~~~d--l~~i~~lk~~~~~--p 196 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEE-----WLYAA-EYILSS-GNGNVILCER-GI--RTFEKATRNTLD--LSAVPVLKKETHL--P 196 (260)
T ss_pred CCCcEEEeCCCCCCHHH-----HHHHH-HHHHHc-CCCcEEEEEC-CC--CCCCCCCcCCcC--HHHHHHHHHhhCC--C
Confidence 46689999999989888 88887 888765 54 4555443 33 221 1111111 1222233333454 7
Q ss_pred EEE-EEeccc
Q 019314 131 FYV-VGFSMG 139 (343)
Q Consensus 131 ~~l-vG~S~G 139 (343)
+.+ -.||.|
T Consensus 197 V~~ds~Hs~G 206 (260)
T TIGR01361 197 IIVDPSHAAG 206 (260)
T ss_pred EEEcCCCCCC
Confidence 777 799988
No 336
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=29.05 E-value=1.2e+02 Score=19.00 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=22.0
Q ss_pred HcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHH
Q 019314 87 ELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELAD 123 (343)
Q Consensus 87 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~ 123 (343)
..+|.+..+|+||+-. .+.|+++..+.+...++
T Consensus 13 dg~y~~~~Pdlpgc~s----~G~T~eea~~n~~eai~ 45 (73)
T COG1598 13 DGGYVASVPDLPGCHS----QGETLEEALQNAKEAIE 45 (73)
T ss_pred CCCEEEEeCCCCCccc----cCCCHHHHHHHHHHHHH
Confidence 3378999999999742 23466666666655554
No 337
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=28.97 E-value=47 Score=23.70 Aligned_cols=19 Identities=32% Similarity=0.457 Sum_probs=16.6
Q ss_pred CCCCCeEEEecCCCCCccc
Q 019314 52 YPTSLLHLNFHLFNGCVGS 70 (343)
Q Consensus 52 ~~~~~~vv~ihG~~~~~~~ 70 (343)
.+.+|.|+-+||++|.+..
T Consensus 49 ~p~KpLVlSfHG~tGtGKn 67 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKN 67 (127)
T ss_pred CCCCCEEEEeecCCCCcHH
Confidence 4568999999999999888
No 338
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=28.57 E-value=44 Score=26.73 Aligned_cols=29 Identities=3% Similarity=0.116 Sum_probs=21.0
Q ss_pred EEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCC
Q 019314 58 HLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRP 98 (343)
Q Consensus 58 vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 98 (343)
=||++|-|-+... ..|++. ||+|+.+|+-
T Consensus 46 rvLvPgCGkg~D~-----------~~LA~~-G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSIDM-----------LFFLSK-GVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHHH-----------HHHHhC-CCcEEEEecC
Confidence 4677776666555 556655 9999999984
No 339
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=28.37 E-value=4.2e+02 Score=23.81 Aligned_cols=64 Identities=25% Similarity=0.308 Sum_probs=41.2
Q ss_pred CcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhc--ccceeEEE
Q 019314 89 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALI 160 (343)
Q Consensus 89 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~ 160 (343)
+|.++.+|-+|....+ +...+.+..+.+.+.. ..+++|--++-|.-+...|..+-+ .+.++|+-
T Consensus 182 ~~DvVIIDTaGr~~~d-------~~l~~eL~~i~~~~~p-~e~lLVvda~tgq~~~~~a~~f~~~v~i~giIlT 247 (428)
T TIGR00959 182 GFDVVIVDTAGRLQID-------EELMEELAAIKEILNP-DEILLVVDAMTGQDAVNTAKTFNERLGLTGVVLT 247 (428)
T ss_pred CCCEEEEeCCCccccC-------HHHHHHHHHHHHhhCC-ceEEEEEeccchHHHHHHHHHHHhhCCCCEEEEe
Confidence 6889999998864322 2355666666666666 467777666666667777665543 46666654
No 340
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.
Probab=27.90 E-value=74 Score=25.85 Aligned_cols=34 Identities=9% Similarity=-0.034 Sum_probs=23.0
Q ss_pred eEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc
Q 019314 57 LHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY 100 (343)
Q Consensus 57 ~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~ 100 (343)
+=|+|=|.+..... ...++...||+|.++|-|..
T Consensus 101 ~~L~IfGaG~va~~----------la~la~~lGf~V~v~D~R~~ 134 (246)
T TIGR02964 101 PHVVLFGAGHVGRA----------LVRALAPLPCRVTWVDSREA 134 (246)
T ss_pred CEEEEECCcHHHHH----------HHHHHhcCCCEEEEEeCCcc
Confidence 34555565555444 26777777999999998854
No 341
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=27.87 E-value=76 Score=25.77 Aligned_cols=20 Identities=20% Similarity=0.180 Sum_probs=17.2
Q ss_pred EEEEecccHHHHHHHHHHhh
Q 019314 132 YVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 132 ~lvG~S~Gg~~a~~~a~~~p 151 (343)
.+.|.|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999987643
No 342
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=27.71 E-value=2.2e+02 Score=19.96 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=46.7
Q ss_pred eEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 019314 57 LHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGF 136 (343)
Q Consensus 57 ~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~ 136 (343)
.||.-||-. +.. ....+ ..+.... -.+.++++. ++.+.+++.+.+.++++..+.++.++++--
T Consensus 3 ili~sHG~~--A~g-----i~~~~-~~i~G~~-~~i~~~~~~--------~~~~~~~~~~~i~~~i~~~~~~~~viil~D 65 (122)
T cd00006 3 IIIATHGGF--ASG-----LLNSA-EMILGEQ-ENVEAIDFP--------PGESPDDLLEKIKAALAELDSGEGVLILTD 65 (122)
T ss_pred EEEEcCHHH--HHH-----HHHHH-HHhcCCC-CCeEEEEeC--------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 577888832 233 33443 5554431 356677664 234788888999999988864357777777
Q ss_pred cccHHHHHHHH
Q 019314 137 SMGGQVVWSCL 147 (343)
Q Consensus 137 S~Gg~~a~~~a 147 (343)
=+||.......
T Consensus 66 l~GGSp~n~~~ 76 (122)
T cd00006 66 LFGGSPNNAAA 76 (122)
T ss_pred CCCCCHHHHHH
Confidence 77887755443
No 343
>TIGR02540 gpx7 putative glutathione peroxidase Gpx7. This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.
Probab=27.46 E-value=1.8e+02 Score=21.23 Aligned_cols=81 Identities=17% Similarity=0.234 Sum_probs=38.7
Q ss_pred eeeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHH
Q 019314 35 LLQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSL 114 (343)
Q Consensus 35 ~~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 114 (343)
.+...+|.++...... +++.||..-...+....-.......+. ..+.+. |+.|+++...-+|.++.. -
T Consensus 6 ~l~~~~G~~~~l~~~~---Gk~vvv~~~as~C~~c~~~~~~l~~l~-~~~~~~-~~~v~~i~~~~~~~~~~d-------~ 73 (153)
T TIGR02540 6 EVKDARGRTVSLEKYR---GKVSLVVNVASECGFTDQNYRALQELH-RELGPS-HFNVLAFPCNQFGESEPD-------S 73 (153)
T ss_pred eeECCCCCEecHHHhC---CCEEEEEEeCCCCCchhhhHHHHHHHH-HHHhhC-CeEEEEEeccccccCCCC-------C
Confidence 4455677776555443 245444443332222211111122332 333333 788999876545555321 1
Q ss_pred HHHHHHHHHH-hCC
Q 019314 115 ALDIEELADQ-LGL 127 (343)
Q Consensus 115 ~~di~~~l~~-l~~ 127 (343)
.+.+.++++. .++
T Consensus 74 ~~~~~~f~~~~~~~ 87 (153)
T TIGR02540 74 SKEIESFARRNYGV 87 (153)
T ss_pred HHHHHHHHHHhcCC
Confidence 3456667764 565
No 344
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=27.44 E-value=39 Score=26.02 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=21.6
Q ss_pred CeEEEecCC---CCCcccchhhhhhhhhhHHHHhHcCcEEEEec
Q 019314 56 LLHLNFHLF---NGCVGSLNFTVLACLSFQEVVDELGIYIVSFD 96 (343)
Q Consensus 56 ~~vv~ihG~---~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 96 (343)
..||++|.. ..+... ...++ +.|.++ ||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~-----l~~~i-~~l~~~-Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKA-----LPTII-KKLKEK-GYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHH-----HHHHH-HHHHHC-CCEEEEHH
Confidence 359999942 223333 55565 666665 99998764
No 345
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=26.70 E-value=1.1e+02 Score=22.35 Aligned_cols=30 Identities=13% Similarity=0.101 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEecccHHHH
Q 019314 113 SLALDIEELADQLGLGSKFYVVGFSMGGQVV 143 (343)
Q Consensus 113 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a 143 (343)
+....+...+..++. +.++++||+-=|.+.
T Consensus 41 ~~~~sl~~av~~l~~-~~IiV~gHt~Cg~~~ 70 (142)
T cd03379 41 DAIRSLVVSVYLLGT-REIIVIHHTDCGMLT 70 (142)
T ss_pred hHHHHHHHHHHHhCC-CEEEEEeecCCcceE
Confidence 566778888889999 799999998555443
No 346
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=26.43 E-value=84 Score=25.66 Aligned_cols=22 Identities=18% Similarity=0.110 Sum_probs=18.3
Q ss_pred eEEEEEecccHHHHHHHHHHhh
Q 019314 130 KFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 130 ~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
.-.++|.|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3469999999999999987544
No 347
>PF13728 TraF: F plasmid transfer operon protein
Probab=26.35 E-value=1.9e+02 Score=22.91 Aligned_cols=42 Identities=14% Similarity=0.141 Sum_probs=32.1
Q ss_pred eEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCC
Q 019314 57 LHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESD 104 (343)
Q Consensus 57 ~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~ 104 (343)
.++|.-|.+.-... ..+++ ..+.++.|+.|+.++.=|.+...
T Consensus 124 L~~F~~~~C~~C~~-----~~pil-~~~~~~yg~~v~~vs~DG~~~~~ 165 (215)
T PF13728_consen 124 LFFFYRSDCPYCQQ-----QAPIL-QQFADKYGFSVIPVSLDGRPIPS 165 (215)
T ss_pred EEEEEcCCCchhHH-----HHHHH-HHHHHHhCCEEEEEecCCCCCcC
Confidence 45556665555555 77887 99999999999999998877664
No 348
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=26.29 E-value=50 Score=27.83 Aligned_cols=17 Identities=24% Similarity=0.389 Sum_probs=15.1
Q ss_pred EEEEecccHHHHHHHHH
Q 019314 132 YVVGFSMGGQVVWSCLK 148 (343)
Q Consensus 132 ~lvG~S~Gg~~a~~~a~ 148 (343)
.+.|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47899999999999886
No 349
>PLN03006 carbonate dehydratase
Probab=26.14 E-value=1.3e+02 Score=25.23 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEecccHHHHH
Q 019314 114 LALDIEELADQLGLGSKFYVVGFSMGGQVVW 144 (343)
Q Consensus 114 ~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~ 144 (343)
...-|+..+..|+. +.++|+|||-=|.+..
T Consensus 158 ~~aSLEYAV~~L~V-~~IVV~GHs~CGaV~A 187 (301)
T PLN03006 158 TKAALEFSVNTLNV-ENILVIGHSRCGGIQA 187 (301)
T ss_pred hhhhHHHHHHHhCC-CEEEEecCCCchHHHH
Confidence 56778889999999 7999999998776653
No 350
>PRK04148 hypothetical protein; Provisional
Probab=26.03 E-value=1.4e+02 Score=21.62 Aligned_cols=30 Identities=13% Similarity=0.017 Sum_probs=21.2
Q ss_pred CeEEEEEecccHHHHHHHHHHhhcccceeEEEcc
Q 019314 129 SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAP 162 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~ 162 (343)
.++..||...|..+|..++.. . .-++.++-
T Consensus 18 ~kileIG~GfG~~vA~~L~~~-G---~~ViaIDi 47 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKES-G---FDVIVIDI 47 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHC-C---CEEEEEEC
Confidence 579999999998888877753 1 24455553
No 351
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=25.81 E-value=2.3e+02 Score=19.58 Aligned_cols=77 Identities=16% Similarity=0.131 Sum_probs=49.0
Q ss_pred eEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 019314 57 LHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGF 136 (343)
Q Consensus 57 ~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~ 136 (343)
.||.-||. -+.. ....+ ..+.....-.+.++++. ++.+.+++.+.+.+.++.++.++.+.++--
T Consensus 2 iii~sHG~--~A~g-----~~~~~-~~i~G~~~~~i~~~~~~--------~~~~~~~~~~~l~~~i~~~~~~~~vlil~D 65 (116)
T PF03610_consen 2 IIIASHGS--LAEG-----LLESA-EMILGEDQDNIEAVDLY--------PDESIEDFEEKLEEAIEELDEGDGVLILTD 65 (116)
T ss_dssp EEEEEETT--HHHH-----HHHHH-HHHHTSTCSSEEEEEET--------TTSCHHHHHHHHHHHHHHCCTTSEEEEEES
T ss_pred EEEEECcH--HHHH-----HHHHH-HHHcCCCcccEEEEECc--------CCCCHHHHHHHHHHHHHhccCCCcEEEEee
Confidence 47888882 2333 34444 55555411246666653 235788999999999988865467777777
Q ss_pred cccHHHHHHHHHH
Q 019314 137 SMGGQVVWSCLKY 149 (343)
Q Consensus 137 S~Gg~~a~~~a~~ 149 (343)
=.||.....++..
T Consensus 66 l~ggsp~n~a~~~ 78 (116)
T PF03610_consen 66 LGGGSPFNEAARL 78 (116)
T ss_dssp STTSHHHHHHHHH
T ss_pred CCCCccchHHHHH
Confidence 7777666555544
No 352
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=25.55 E-value=2e+02 Score=24.04 Aligned_cols=71 Identities=15% Similarity=0.099 Sum_probs=42.1
Q ss_pred EEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCc------ccCCC------------------CCCccHHH
Q 019314 58 HLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGY------GESDP------------------DPKRTRKS 113 (343)
Q Consensus 58 vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~------G~S~~------------------~~~~~~~~ 113 (343)
||+|-|-.+++.. .++ ..|+++.+..+|..|-.-. |-..+ ...++..+
T Consensus 1 vi~i~G~t~~GKs-------~la-~~l~~~~~~~iis~Ds~qvY~~l~IgTakp~~~e~~~v~hhlid~~~~~~~~~v~~ 72 (287)
T TIGR00174 1 VIFIMGPTAVGKS-------QLA-IQLAKKLNAEIISVDSMQIYKGMDIGTAKPSLQEREGIPHHLIDILDPSESYSAAD 72 (287)
T ss_pred CEEEECCCCCCHH-------HHH-HHHHHhCCCcEEEechhheeeeccccCCCCCHHHHcCccEEEEEEechhheEcHHH
Confidence 4667777777766 454 6777777778888876321 11111 11246777
Q ss_pred HHHHHHHHHHHh-CCCCeEEEEEe
Q 019314 114 LALDIEELADQL-GLGSKFYVVGF 136 (343)
Q Consensus 114 ~~~di~~~l~~l-~~~~~~~lvG~ 136 (343)
+.++..+.++.+ .-++..+++|-
T Consensus 73 f~~~a~~~i~~~~~~g~~pi~vGG 96 (287)
T TIGR00174 73 FQTLALNAIADITARGKIPLLVGG 96 (287)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcC
Confidence 888888777765 22234566653
No 353
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=25.48 E-value=2.6e+02 Score=26.48 Aligned_cols=46 Identities=13% Similarity=-0.038 Sum_probs=26.7
Q ss_pred CCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcccC
Q 019314 54 TSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYGES 103 (343)
Q Consensus 54 ~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S 103 (343)
-+.++++|||........... ..+. ..|.. .|..|-..-+|+-|.+
T Consensus 550 i~~P~LliHG~~D~~v~~~q~--~~~~-~aL~~-~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQA--EQLV-DALKR-KGKPVELVVFPDEGHG 595 (620)
T ss_pred cCCCEEEEeecCCccCChHHH--HHHH-HHHHH-cCceEEEEEeCCCCcC
Confidence 357899999998665442221 1332 55554 4766666666654444
No 354
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=25.29 E-value=3.7e+02 Score=22.85 Aligned_cols=75 Identities=17% Similarity=0.148 Sum_probs=49.2
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCC----Cc----ccCC----------------CCCCcc
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRP----GY----GESD----------------PDPKRT 110 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~----G~S~----------------~~~~~~ 110 (343)
.+.+++|-|-.+++.. .++ -.|+++.|-.||..|-. |. ++-+ +...++
T Consensus 2 ~~~~i~I~GPTAsGKT-------~la-i~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ys 73 (308)
T COG0324 2 KPKLIVIAGPTASGKT-------ALA-IALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYS 73 (308)
T ss_pred CccEEEEECCCCcCHH-------HHH-HHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCcccccc
Confidence 3568888888888877 444 67888888889998853 22 2211 112357
Q ss_pred HHHHHHHHHHHHHHhCC-CCeEEEEEec
Q 019314 111 RKSLALDIEELADQLGL-GSKFYVVGFS 137 (343)
Q Consensus 111 ~~~~~~di~~~l~~l~~-~~~~~lvG~S 137 (343)
..++.++....++.... ++..+|||-|
T Consensus 74 a~~f~~~a~~~i~~i~~rgk~pIlVGGT 101 (308)
T COG0324 74 AAEFQRDALAAIDDILARGKLPILVGGT 101 (308)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEccH
Confidence 78888888888877632 2456677643
No 355
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=25.18 E-value=72 Score=23.11 Aligned_cols=18 Identities=17% Similarity=0.230 Sum_probs=14.5
Q ss_pred HHHHhHcCcEEEEecCCC
Q 019314 82 QEVVDELGIYIVSFDRPG 99 (343)
Q Consensus 82 ~~l~~~~g~~vi~~D~~G 99 (343)
..+++..||+|..+|.|.
T Consensus 14 ~~la~~lg~~v~v~d~r~ 31 (136)
T PF13478_consen 14 ARLAALLGFRVTVVDPRP 31 (136)
T ss_dssp HHHHHHCTEEEEEEES-C
T ss_pred HHHHHhCCCEEEEEcCCc
Confidence 677778899999999994
No 356
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=24.83 E-value=96 Score=24.90 Aligned_cols=54 Identities=15% Similarity=0.129 Sum_probs=34.2
Q ss_pred EEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCC-CCeEE--EEEecccHHHHH
Q 019314 91 YIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGL-GSKFY--VVGFSMGGQVVW 144 (343)
Q Consensus 91 ~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~-~~~~~--lvG~S~Gg~~a~ 144 (343)
-|+.+|-+|...+...+-..+.....-+...+..... +.|++ |+|++++|.+-.
T Consensus 67 Iv~lVD~~sQa~grreEllGi~~alAhla~a~a~AR~~GHpvI~Lv~G~A~SGaFLA 123 (234)
T PF06833_consen 67 IVALVDVPSQAYGRREELLGINQALAHLAKAYALARLAGHPVIGLVYGKAMSGAFLA 123 (234)
T ss_pred EEEEEeCCccccchHHHHhhHHHHHHHHHHHHHHHHHcCCCeEEEEecccccHHHHH
Confidence 4788999998877665555666555555544444311 24554 789999876543
No 357
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=24.75 E-value=96 Score=25.18 Aligned_cols=17 Identities=29% Similarity=0.219 Sum_probs=15.6
Q ss_pred EEEEecccHHHHHHHHH
Q 019314 132 YVVGFSMGGQVVWSCLK 148 (343)
Q Consensus 132 ~lvG~S~Gg~~a~~~a~ 148 (343)
.+.|.|.|+.+|..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 79999999999999984
No 358
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=24.65 E-value=5.1e+02 Score=23.24 Aligned_cols=71 Identities=11% Similarity=0.121 Sum_probs=42.8
Q ss_pred HHHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEE-EecccHHHHHHHHHHhhc-ccceeEE
Q 019314 82 QEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVV-GFSMGGQVVWSCLKYISH-RLTGAAL 159 (343)
Q Consensus 82 ~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lv-G~S~Gg~~a~~~a~~~p~-~v~~lil 159 (343)
..+.+..++.++.+|-+|.-.. -....+.+.++++.... ..++++ .-++++.-....+..+.. .+.++|+
T Consensus 313 ~~lk~~~~~DvVLIDTaGRs~k-------d~~lm~EL~~~lk~~~P-devlLVLsATtk~~d~~~i~~~F~~~~idglI~ 384 (436)
T PRK11889 313 TYFKEEARVDYILIDTAGKNYR-------ASETVEEMIETMGQVEP-DYICLTLSASMKSKDMIEIITNFKDIHIDGIVF 384 (436)
T ss_pred HHHHhccCCCEEEEeCccccCc-------CHHHHHHHHHHHhhcCC-CeEEEEECCccChHHHHHHHHHhcCCCCCEEEE
Confidence 3343323688999998876331 23445566677766554 355555 334677676777766543 5777777
Q ss_pred E
Q 019314 160 I 160 (343)
Q Consensus 160 ~ 160 (343)
.
T Consensus 385 T 385 (436)
T PRK11889 385 T 385 (436)
T ss_pred E
Confidence 4
No 359
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=24.61 E-value=67 Score=24.25 Aligned_cols=21 Identities=14% Similarity=-0.191 Sum_probs=16.9
Q ss_pred CeEEEEEecccHHHHHHHHHH
Q 019314 129 SKFYVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~a~~~a~~ 149 (343)
..-.+.|.|.||.+|+.++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 455788999999999888765
No 360
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=24.59 E-value=1.9e+02 Score=23.89 Aligned_cols=52 Identities=15% Similarity=0.211 Sum_probs=32.4
Q ss_pred CCCCCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCC-CCCcccc-C-cchHHHHHHH
Q 019314 276 PNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPG-SGHLIAD-A-DGMTEAIIKA 333 (343)
Q Consensus 276 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~-e-p~~~~~~i~~ 333 (343)
....+||.++.|++ ...++..+.+|+++.+.++. .|++--. - |++..+.|++
T Consensus 144 g~~gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~ 198 (270)
T cd08769 144 GEFGVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELRE 198 (270)
T ss_pred hhcCCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHH
Confidence 34567799999965 33455666679998888764 4544433 2 5555555543
No 361
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=24.53 E-value=66 Score=26.35 Aligned_cols=43 Identities=23% Similarity=0.155 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCCeE-EEEEecccHHHHHHHHHHhhcccceeEE
Q 019314 115 ALDIEELADQLGLGSKF-YVVGFSMGGQVVWSCLKYISHRLTGAAL 159 (343)
Q Consensus 115 ~~di~~~l~~l~~~~~~-~lvG~S~Gg~~a~~~a~~~p~~v~~lil 159 (343)
|.-+.++++.-.+ ++ .++|.|+|+.-+..+..+.+.+-.+++.
T Consensus 27 AGVLD~fl~a~~~--~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 27 AGVLDEFLRANFN--PFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred HHHHHHHHHhccC--CcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 3445566644433 44 4779999999999999888877665554
No 362
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=24.40 E-value=91 Score=25.42 Aligned_cols=22 Identities=14% Similarity=0.077 Sum_probs=18.1
Q ss_pred eEEEEEecccHHHHHHHHHHhh
Q 019314 130 KFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 130 ~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
.-.++|.|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568999999999999987543
No 363
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.28 E-value=60 Score=27.08 Aligned_cols=19 Identities=16% Similarity=0.088 Sum_probs=16.5
Q ss_pred EEEEecccHHHHHHHHHHh
Q 019314 132 YVVGFSMGGQVVWSCLKYI 150 (343)
Q Consensus 132 ~lvG~S~Gg~~a~~~a~~~ 150 (343)
.+.|.|.||.+|+.++..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6889999999999998653
No 364
>COG2069 CdhD CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) [Energy production and conversion]
Probab=24.16 E-value=4.3e+02 Score=22.19 Aligned_cols=51 Identities=16% Similarity=0.195 Sum_probs=35.2
Q ss_pred HHHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecc
Q 019314 83 EVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSM 138 (343)
Q Consensus 83 ~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~ 138 (343)
...+++|-..+.+.+-+.+ ..-.+.+..+.++.+++++++.+. + ++||-|-
T Consensus 158 k~Vk~fgadmvTiHlIsTd--Pki~D~p~~EAak~lEdvLqAVdv--P-iiiGGSG 208 (403)
T COG2069 158 KCVKKFGADMVTIHLISTD--PKIKDTPAKEAAKTLEDVLQAVDV--P-IIIGGSG 208 (403)
T ss_pred HHHHHhCCceEEEEeecCC--ccccCCCHHHHHHHHHHHHHhcCc--C-EEecCCC
Confidence 3455667788888876443 223345788999999999999865 3 5666663
No 365
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=24.03 E-value=67 Score=25.61 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=23.7
Q ss_pred CeEEEecCC-CCCcccchhhhhhhhhhHHHHhHcCcEEEEec
Q 019314 56 LLHLNFHLF-NGCVGSLNFTVLACLSFQEVVDELGIYIVSFD 96 (343)
Q Consensus 56 ~~vv~ihG~-~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 96 (343)
..||++|.. ..+... ...++ +.|.++ ||+++.++
T Consensus 187 g~IiLlHd~~~~t~~a-----L~~ii-~~lk~~-Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEA-----LDKII-KDLKEQ-GYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHH-----HHHHH-HHHHHC-CCEEEEhH
Confidence 469999974 334444 66676 777666 99998775
No 366
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.98 E-value=61 Score=27.93 Aligned_cols=18 Identities=22% Similarity=0.143 Sum_probs=15.6
Q ss_pred EEEEecccHHHHHHHHHH
Q 019314 132 YVVGFSMGGQVVWSCLKY 149 (343)
Q Consensus 132 ~lvG~S~Gg~~a~~~a~~ 149 (343)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 577999999999999863
No 367
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length. The function of this family is unknown.
Probab=23.74 E-value=1.6e+02 Score=23.34 Aligned_cols=43 Identities=23% Similarity=0.389 Sum_probs=27.5
Q ss_pred HHHHHHHh--CCCCeEEEEEecccH----HHHHHHHHHhhcccceeEEEcc
Q 019314 118 IEELADQL--GLGSKFYVVGFSMGG----QVVWSCLKYISHRLTGAALIAP 162 (343)
Q Consensus 118 i~~~l~~l--~~~~~~~lvG~S~Gg----~~a~~~a~~~p~~v~~lil~~~ 162 (343)
..+||.++ |.+.+.++..+|-|+ .+|+..|+++-. -.+|.+-|
T Consensus 29 ~aEfISAlAAG~nAkliVe~~s~g~~~~ttiaLaaAAr~Tg--GR~vCIvp 77 (218)
T PF07279_consen 29 VAEFISALAAGWNAKLIVEAWSSGGAISTTIALAAAARQTG--GRHVCIVP 77 (218)
T ss_pred HHHHHHHHhccccceEEEEEecCCCchHhHHHHHHHHHhcC--CeEEEEcC
Confidence 45566655 444688888888885 567777777543 44455544
No 368
>PLN02154 carbonic anhydrase
Probab=23.35 E-value=1.9e+02 Score=24.17 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHH
Q 019314 113 SLALDIEELADQLGLGSKFYVVGFSMGGQVVWSC 146 (343)
Q Consensus 113 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~ 146 (343)
.....|+..+..++. +.++|+|||-=|.+...+
T Consensus 151 ~~~aslEyAv~~L~v-~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 151 ETNSALEFAVTTLQV-ENIIVMGHSNCGGIAALM 183 (290)
T ss_pred chhhHHHHHHHHhCC-CEEEEecCCCchHHHHHH
Confidence 356678888999999 799999999766655433
No 369
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=23.14 E-value=3.4e+02 Score=20.60 Aligned_cols=54 Identities=24% Similarity=0.319 Sum_probs=34.3
Q ss_pred HHhHcCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecccH
Q 019314 84 VVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGG 140 (343)
Q Consensus 84 l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg 140 (343)
|.+. |++.+.+|.=+.=-. +....-..++.+.+.++.+..+. +++.|+-.|.|.
T Consensus 36 Lk~~-Gik~li~DkDNTL~~-~~~~~i~~~~~~~~~~l~~~~~~-~~v~IvSNsaGs 89 (168)
T PF09419_consen 36 LKKK-GIKALIFDKDNTLTP-PYEDEIPPEYAEWLNELKKQFGK-DRVLIVSNSAGS 89 (168)
T ss_pred hhhc-CceEEEEcCCCCCCC-CCcCcCCHHHHHHHHHHHHHCCC-CeEEEEECCCCc
Confidence 5554 999999998654211 11222334555566666666555 589999999863
No 370
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=23.12 E-value=2.1e+02 Score=22.58 Aligned_cols=57 Identities=11% Similarity=0.030 Sum_probs=39.6
Q ss_pred CCcEEEEecCCCCCCChhHHHHHhhcCCCceEEEcCCCCCccccC-cchHHHHHHHHHc
Q 019314 279 EGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 336 (343)
Q Consensus 279 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 336 (343)
..|++++.|..+...+.+....+.+.+.+.=++.++.+ ++.-.. .+.+.+.+...+.
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~-~~~~~~~~~~~r~~~~~v~p 110 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDR-DCGSAGFDASFRRLMKRVFP 110 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECC-CcccccccHHHHHHHHHhcC
Confidence 45699999999998888889899888877777777765 222222 3345555555543
No 371
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=22.83 E-value=72 Score=26.32 Aligned_cols=34 Identities=12% Similarity=0.065 Sum_probs=24.3
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEec
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFD 96 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 96 (343)
..||++|-...+... ...++ ..|.++ ||+++.++
T Consensus 231 G~IILmHd~~~T~~a-----L~~iI-~~Lk~k-Gy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEG-----LEEMI-TIIKEK-GYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHH-----HHHHH-HHHHHC-CCEEEeHH
Confidence 468899976555555 66676 777665 99988764
No 372
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=22.82 E-value=2.7e+02 Score=20.72 Aligned_cols=47 Identities=28% Similarity=0.330 Sum_probs=29.1
Q ss_pred CcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHH
Q 019314 89 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVW 144 (343)
Q Consensus 89 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~ 144 (343)
|-.|++.|.+|--.| .+++++.+..+.+. | .+-..+||-|.|=.-++
T Consensus 67 ~~~vi~Ld~~Gk~~s-------Se~fA~~l~~~~~~-G-~~i~f~IGG~~Gl~~~~ 113 (155)
T COG1576 67 GSYVVLLDIRGKALS-------SEEFADFLERLRDD-G-RDISFLIGGADGLSEAV 113 (155)
T ss_pred CCeEEEEecCCCcCC-------hHHHHHHHHHHHhc-C-CeEEEEEeCcccCCHHH
Confidence 558999999875443 44555555444433 3 24677889998844333
No 373
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=22.81 E-value=4.5e+02 Score=22.23 Aligned_cols=72 Identities=10% Similarity=-0.039 Sum_probs=46.0
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCC----Cc--c--cC----------------CCCCCccH
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRP----GY--G--ES----------------DPDPKRTR 111 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~--G--~S----------------~~~~~~~~ 111 (343)
+.||+|-|-.+++.. .++ -.|+++ +-.+|..|=. |. | .- ++...++.
T Consensus 4 ~~ii~I~GpTasGKS-------~LA-l~LA~~-~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv 74 (300)
T PRK14729 4 NKIVFIFGPTAVGKS-------NIL-FHFPKG-KAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNL 74 (300)
T ss_pred CcEEEEECCCccCHH-------HHH-HHHHHh-CCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeH
Confidence 358899999988887 555 677777 4478888743 22 1 11 11223588
Q ss_pred HHHHHHHHHHHHHhC-CCCeEEEEEe
Q 019314 112 KSLALDIEELADQLG-LGSKFYVVGF 136 (343)
Q Consensus 112 ~~~~~di~~~l~~l~-~~~~~~lvG~ 136 (343)
.++.++....++.+. -++..+|+|-
T Consensus 75 ~~f~~~a~~~i~~i~~~gk~PilvGG 100 (300)
T PRK14729 75 GIFYKEALKIIKELRQQKKIPIFVGG 100 (300)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 889999988888762 2234566653
No 374
>PLN03093 Protein SENSITIVITY TO RED LIGHT REDUCED 1; Provisional
Probab=22.71 E-value=1.8e+02 Score=24.00 Aligned_cols=14 Identities=14% Similarity=0.040 Sum_probs=10.5
Q ss_pred CeEEEEEecccHHH
Q 019314 129 SKFYVVGFSMGGQV 142 (343)
Q Consensus 129 ~~~~lvG~S~Gg~~ 142 (343)
.+++++|+|++.+.
T Consensus 198 ~~ivliGNSFe~y~ 211 (273)
T PLN03093 198 NHIALFGNSFEMYE 211 (273)
T ss_pred CCEEEEeCCHHHHH
Confidence 47888888888544
No 375
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=22.70 E-value=3.2e+02 Score=22.82 Aligned_cols=76 Identities=16% Similarity=0.151 Sum_probs=36.6
Q ss_pred HcCcEEE------EecCCCcccCCCCCCccHHHHHHHHHHHHHH---hCCCCeEEEEEecccH----HHHHHHHHHhhcc
Q 019314 87 ELGIYIV------SFDRPGYGESDPDPKRTRKSLALDIEELADQ---LGLGSKFYVVGFSMGG----QVVWSCLKYISHR 153 (343)
Q Consensus 87 ~~g~~vi------~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~---l~~~~~~~lvG~S~Gg----~~a~~~a~~~p~~ 153 (343)
..|++|. ....+|||...+.. ...++.+++..-++. ++. -..++-|+=-.+ .++-.+.+...+.
T Consensus 26 ~~G~~V~~vpTV~fSnHtgyg~~~g~v--~~~e~l~~~l~~l~~~~~~~~-~davltGYlgs~~qv~~i~~~v~~vk~~~ 102 (281)
T COG2240 26 RLGLDVWAVPTVQFSNHTGYGKWTGIV--MPPEQLADLLNGLEAIDKLGE-CDAVLTGYLGSAEQVRAIAGIVKAVKEAN 102 (281)
T ss_pred HcCCceeeeceEEecCCCCCCCCCCcC--CCHHHHHHHHHHHHhcccccc-cCEEEEccCCCHHHHHHHHHHHHHHhccC
Confidence 4477654 45788888764322 222333333333332 122 345666652222 2222222222224
Q ss_pred cceeEEEccccc
Q 019314 154 LTGAALIAPVIN 165 (343)
Q Consensus 154 v~~lil~~~~~~ 165 (343)
-+.+++++|...
T Consensus 103 P~~~~l~DPVMG 114 (281)
T COG2240 103 PNALYLCDPVMG 114 (281)
T ss_pred CCeEEEeCCccc
Confidence 568899999865
No 376
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=22.67 E-value=4.5e+02 Score=21.79 Aligned_cols=66 Identities=20% Similarity=0.194 Sum_probs=38.1
Q ss_pred cCcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhC------CCCeEEEEEecccHHHHHHHHHHhhc--ccceeEE
Q 019314 88 LGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLG------LGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAAL 159 (343)
Q Consensus 88 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~------~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil 159 (343)
.+|.++.+|-+|....+ ..+.+.+..+.+... . ..+++|--+.-|.-++.-+..+-+ .+.++|+
T Consensus 153 ~~~D~ViIDT~G~~~~d-------~~~~~el~~~~~~~~~~~~~~~-~~~~LVl~a~~~~~~~~~~~~f~~~~~~~g~Il 224 (272)
T TIGR00064 153 RNIDVVLIDTAGRLQNK-------VNLMDELKKIKRVIKKVDKDAP-DEVLLVLDATTGQNALEQAKVFNEAVGLTGIIL 224 (272)
T ss_pred CCCCEEEEeCCCCCcch-------HHHHHHHHHHHHHHhcccCCCC-ceEEEEEECCCCHHHHHHHHHHHhhCCCCEEEE
Confidence 37999999999886532 234445555554433 4 355666555555555555554332 3666666
Q ss_pred Ec
Q 019314 160 IA 161 (343)
Q Consensus 160 ~~ 161 (343)
--
T Consensus 225 TK 226 (272)
T TIGR00064 225 TK 226 (272)
T ss_pred Ec
Confidence 43
No 377
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=22.65 E-value=1.4e+02 Score=22.96 Aligned_cols=32 Identities=19% Similarity=0.082 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEecccHHHHHHH
Q 019314 114 LALDIEELADQLGLGSKFYVVGFSMGGQVVWSC 146 (343)
Q Consensus 114 ~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~ 146 (343)
....++..+..|+. +.++|+|||-=|.+...+
T Consensus 67 ~~asleyAv~~L~v-~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 67 CLSVLQYAVDVLKV-KHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhhHHHHHHhcCC-CEEEEecCCCchHHHHHH
Confidence 56777888889999 799999999877766543
No 378
>PRK13947 shikimate kinase; Provisional
Probab=22.26 E-value=87 Score=23.37 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=25.0
Q ss_pred EEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCC
Q 019314 59 LNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRP 98 (343)
Q Consensus 59 v~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 98 (343)
|++.|.+++... .+. ..|++..|+.++..|..
T Consensus 4 I~l~G~~GsGKs-------t~a-~~La~~lg~~~id~d~~ 35 (171)
T PRK13947 4 IVLIGFMGTGKT-------TVG-KRVATTLSFGFIDTDKE 35 (171)
T ss_pred EEEEcCCCCCHH-------HHH-HHHHHHhCCCEEECchh
Confidence 788898888877 454 77888889988887764
No 379
>PRK13938 phosphoheptose isomerase; Provisional
Probab=22.14 E-value=2.6e+02 Score=21.80 Aligned_cols=29 Identities=7% Similarity=0.098 Sum_probs=23.3
Q ss_pred HHhCCCCeEEEEEecccHHHHHHHHHHhh
Q 019314 123 DQLGLGSKFYVVGFSMGGQVVWSCLKYIS 151 (343)
Q Consensus 123 ~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p 151 (343)
+.+..+.+++++|.+-.|.+|..++.+..
T Consensus 40 ~~l~~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 40 AGYRAGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred HHHHCCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 33433479999999999999999998753
No 380
>cd06583 PGRP Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of
Probab=22.03 E-value=1.4e+02 Score=20.70 Aligned_cols=50 Identities=18% Similarity=0.284 Sum_probs=34.5
Q ss_pred EEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEecccH
Q 019314 91 YIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGG 140 (343)
Q Consensus 91 ~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg 140 (343)
..|.+.+-|...........++..++.+..+++..++...-.|+||....
T Consensus 68 ~sigIe~~g~~~~~~~~~~q~~~~~~L~~~l~~~~~i~~~~~i~~H~~~~ 117 (126)
T cd06583 68 YSIGIELIGNFDGGPPTAAQLEALAELLAYLVKRYGIPPDYRIVGHRDVS 117 (126)
T ss_pred ceEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCEEEecccCC
Confidence 45667776665443344456777788888888888872268899998754
No 381
>cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor.
Probab=22.01 E-value=1.5e+02 Score=21.13 Aligned_cols=31 Identities=13% Similarity=0.133 Sum_probs=22.0
Q ss_pred EEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEec
Q 019314 58 HLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFD 96 (343)
Q Consensus 58 vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 96 (343)
||+|-|.++++.. .++ ..|++..|+.++..|
T Consensus 1 ~I~i~G~~GsGKs-------t~a-~~la~~~~~~~~~~~ 31 (147)
T cd02020 1 IIAIDGPAGSGKS-------TVA-KLLAKKLGLPYLDTG 31 (147)
T ss_pred CEEEECCCCCCHH-------HHH-HHHHHHhCCceeccc
Confidence 4677777777766 344 778877787777777
No 382
>PRK13948 shikimate kinase; Provisional
Probab=21.56 E-value=1.2e+02 Score=23.37 Aligned_cols=35 Identities=20% Similarity=0.215 Sum_probs=26.9
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecC
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDR 97 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 97 (343)
.+..|++.|+.++... .+. ..|++..|+.++-.|.
T Consensus 9 ~~~~I~LiG~~GsGKS-------Tvg-~~La~~lg~~~iD~D~ 43 (182)
T PRK13948 9 PVTWVALAGFMGTGKS-------RIG-WELSRALMLHFIDTDR 43 (182)
T ss_pred CCCEEEEECCCCCCHH-------HHH-HHHHHHcCCCEEECCH
Confidence 4578889999988877 444 6777777888887774
No 383
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=21.28 E-value=2.9e+02 Score=20.68 Aligned_cols=52 Identities=12% Similarity=0.134 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHhC-CCCeEEEEEecccHHHHHHHHHHhhcccceeEEEcc
Q 019314 111 RKSLALDIEELADQLG-LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAP 162 (343)
Q Consensus 111 ~~~~~~di~~~l~~l~-~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~ 162 (343)
++...+.+.++++.+. .++++.++|-|..|..-+.++-..++.+..++=.+|
T Consensus 50 ~~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 50 VEQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 3444445555555442 236899999999999888888776766777766665
No 384
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=21.18 E-value=2.4e+02 Score=20.70 Aligned_cols=36 Identities=19% Similarity=0.192 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHH
Q 019314 111 RKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCL 147 (343)
Q Consensus 111 ~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a 147 (343)
..+....+...+..++. +.++|+||+-=|.+...+.
T Consensus 38 ~~~~~~sle~av~~l~v-~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGV-KEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp -HHHHHHHHHHHHTST--SEEEEEEETT-HHHHHHHH
T ss_pred ccchhhheeeeeecCCC-CEEEEEcCCCchHHHHHHh
Confidence 35667778888888999 7999999998887774433
No 385
>COG1709 Predicted transcriptional regulator [Transcription]
Probab=21.17 E-value=2.7e+02 Score=22.16 Aligned_cols=43 Identities=12% Similarity=-0.097 Sum_probs=28.5
Q ss_pred EEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecC
Q 019314 44 LKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDR 97 (343)
Q Consensus 44 l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 97 (343)
++.+..+- +|.+|.+||.....-. +++ -.+++.-|+..++-.+
T Consensus 186 VAirV~~l---KP~aVVlHGi~~~~vD-------~lA-ikiAe~e~IpLvvT~~ 228 (241)
T COG1709 186 VAIRVSPL---KPAAVVLHGIPPDNVD-------ELA-IKIAEIERIPLVVTTM 228 (241)
T ss_pred EEEEccCC---CccEEEEecCCccchh-------HHH-HHHHhhcCCceEEecC
Confidence 34444444 8899999999876533 666 7777765666665444
No 386
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.98 E-value=1.7e+02 Score=24.69 Aligned_cols=35 Identities=20% Similarity=0.137 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhCC---CCeEEEEEec--ccHHHHHHHHHH
Q 019314 115 ALDIEELADQLGL---GSKFYVVGFS--MGGQVVWSCLKY 149 (343)
Q Consensus 115 ~~di~~~l~~l~~---~~~~~lvG~S--~Gg~~a~~~a~~ 149 (343)
+.-+.+++++.++ ++++.++|.| +|..+|.++..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 4456777777754 4799999997 999999888764
No 387
>PHA02114 hypothetical protein
Probab=20.92 E-value=1.4e+02 Score=19.98 Aligned_cols=34 Identities=6% Similarity=-0.065 Sum_probs=25.4
Q ss_pred CeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEec
Q 019314 56 LLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFD 96 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 96 (343)
.+||+=-.+..+..- |-.++ .+|.+. ||.|++-.
T Consensus 83 gtivldvn~amsr~p-----wi~v~-s~le~~-g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRAP-----WIKVI-SRLEEA-GFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccCc-----HHHHH-HHHHhc-Cceeeehh
Confidence 467777677778888 88887 888765 88888754
No 388
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=20.81 E-value=1.2e+02 Score=21.17 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=24.9
Q ss_pred eEEEEE-ecccHHHHHHHHHHhhcccceeEEEcc
Q 019314 130 KFYVVG-FSMGGQVVWSCLKYISHRLTGAALIAP 162 (343)
Q Consensus 130 ~~~lvG-~S~Gg~~a~~~a~~~p~~v~~lil~~~ 162 (343)
++.|+| ..+.|...+.+...||+ ++-+.+++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeee
Confidence 578899 99999999999999885 665555554
No 389
>PRK13728 conjugal transfer protein TrbB; Provisional
Probab=20.74 E-value=1.6e+02 Score=22.60 Aligned_cols=54 Identities=7% Similarity=0.161 Sum_probs=33.3
Q ss_pred eeecCccEEEEEeccCCCCCCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEecCCCcc
Q 019314 36 LQQTSHQYLKFLNSIEYPTSLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSFDRPGYG 101 (343)
Q Consensus 36 ~~~~~~~~l~y~~~g~~~~~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G 101 (343)
+...+|..+....++ .|+|.-.++..... ..+.+ ..+.++.|+.|+++..-+.+
T Consensus 58 f~l~dG~~v~lsd~~------lV~FwaswCp~C~~-----e~P~L-~~l~~~~g~~Vi~Vs~D~~~ 111 (181)
T PRK13728 58 FRLSNGRQVNLADWK------VVLFMQGHCPYCHQ-----FDPVL-KQLAQQYGFSVFPYTLDGQG 111 (181)
T ss_pred cCCCCCCEeehhHce------EEEEECCCCHhHHH-----HHHHH-HHHHHHcCCEEEEEEeCCCC
Confidence 334466555444332 56666555544445 55665 88888889999999875443
No 390
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=20.73 E-value=4.5e+02 Score=23.38 Aligned_cols=80 Identities=16% Similarity=0.203 Sum_probs=48.8
Q ss_pred HHHHhHcCcEEEEecCCCcccCC----CCCCc---cHHHHHHHHHHHHHHhCCCCeEEEEEecccHHHHHHHHHHhhc-c
Q 019314 82 QEVVDELGIYIVSFDRPGYGESD----PDPKR---TRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH-R 153 (343)
Q Consensus 82 ~~l~~~~g~~vi~~D~~G~G~S~----~~~~~---~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~ 153 (343)
+.+.++ ++-|+-.|..++-.-- ..-.+ +++.+++++......-.. ...+|.|---||..+...++.-|+ .
T Consensus 69 ~al~~~-~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~y-r~PVl~g~g~Gg~~A~asaaqSp~at 146 (456)
T COG3946 69 DALLAR-GALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVY-RLPVLTGPGQGGTLAYASAAQSPDAT 146 (456)
T ss_pred HHHhhc-CCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCc-ccceEeecCCCcHHHHHHHhhChhhh
Confidence 455554 7888888887764332 22223 445555554444333233 466788999999999999988776 3
Q ss_pred cceeEEEccc
Q 019314 154 LTGAALIAPV 163 (343)
Q Consensus 154 v~~lil~~~~ 163 (343)
+.+.+.+.+.
T Consensus 147 lag~Vsldp~ 156 (456)
T COG3946 147 LAGAVSLDPT 156 (456)
T ss_pred hcCccCCCCC
Confidence 5555555443
No 391
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=20.68 E-value=5.8e+02 Score=22.34 Aligned_cols=36 Identities=8% Similarity=0.124 Sum_probs=25.0
Q ss_pred HhCCCCeEEEEEec-ccHHHHHHHHHHhhcccceeEEEccc
Q 019314 124 QLGLGSKFYVVGFS-MGGQVVWSCLKYISHRLTGAALIAPV 163 (343)
Q Consensus 124 ~l~~~~~~~lvG~S-~Gg~~a~~~a~~~p~~v~~lil~~~~ 163 (343)
.+.- .++.|+|-. .|+.++..++.. -|..+++++.-
T Consensus 132 ~l~~-~~VlvvG~GG~Gs~ia~~La~~---Gvg~i~lvD~d 168 (376)
T PRK08762 132 RLLE-ARVLLIGAGGLGSPAALYLAAA---GVGTLGIVDHD 168 (376)
T ss_pred HHhc-CcEEEECCCHHHHHHHHHHHHc---CCCeEEEEeCC
Confidence 3444 689999875 566666666553 47889999874
No 392
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=20.53 E-value=1.2e+02 Score=25.68 Aligned_cols=22 Identities=23% Similarity=0.385 Sum_probs=18.1
Q ss_pred CCCCeEEEEEecccHHHHHHHHH
Q 019314 126 GLGSKFYVVGFSMGGQVVWSCLK 148 (343)
Q Consensus 126 ~~~~~~~lvG~S~Gg~~a~~~a~ 148 (343)
+. ++..+.|||+|=..|+..+.
T Consensus 83 ~~-~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GV-KPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CC-CCceeecccHhHHHHHHHcc
Confidence 35 68899999999988877664
No 393
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=20.42 E-value=1.3e+02 Score=29.02 Aligned_cols=35 Identities=20% Similarity=0.056 Sum_probs=23.5
Q ss_pred HHHHHHHHHHH---HhCCCCeEEEEEecccHHHHHHHHH
Q 019314 113 SLALDIEELAD---QLGLGSKFYVVGFSMGGQVVWSCLK 148 (343)
Q Consensus 113 ~~~~di~~~l~---~l~~~~~~~lvG~S~Gg~~a~~~a~ 148 (343)
..-.++...++ ..++ .--+|.|.|.||.++..+|.
T Consensus 48 ~~Y~~l~~~l~~~~~~~~-~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 48 AVYGALLELLGAHLRLRV-RVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred hHHHHHHHHhhhhhccCC-CCceEEeeCHHHHHHHHHHc
Confidence 33444444444 3345 45578899999999998886
No 394
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=20.42 E-value=1.2e+02 Score=17.44 Aligned_cols=26 Identities=12% Similarity=0.367 Sum_probs=21.7
Q ss_pred ccHHHHHHHHHHHHHHhCCCCeEEEEE
Q 019314 109 RTRKSLALDIEELADQLGLGSKFYVVG 135 (343)
Q Consensus 109 ~~~~~~~~di~~~l~~l~~~~~~~lvG 135 (343)
...+.+..|+...|..+.+ ..+.++|
T Consensus 6 w~PqSWM~DLrS~I~~~~I-~ql~ipG 31 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMAI-TQLFIPG 31 (51)
T ss_pred cCcHHHHHHHHHHHhccee-eeEEecc
Confidence 3677899999999999988 5888877
No 395
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=20.39 E-value=2.5e+02 Score=24.81 Aligned_cols=48 Identities=10% Similarity=0.072 Sum_probs=29.4
Q ss_pred CcEEEEecCCCcccCCCCCCccHHHHHHHHHHHHHHhCCCCeEEEEEec
Q 019314 89 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFS 137 (343)
Q Consensus 89 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S 137 (343)
-|.||.+|.|.+++|....-.-..++.+.+...++-|.. .-+.++-.+
T Consensus 290 ~fDlIilDPPsF~r~k~~~~~~~rdy~~l~~~~~~iL~p-gG~l~~~s~ 337 (393)
T COG1092 290 KFDLIILDPPSFARSKKQEFSAQRDYKDLNDLALRLLAP-GGTLVTSSC 337 (393)
T ss_pred cccEEEECCcccccCcccchhHHHHHHHHHHHHHHHcCC-CCEEEEEec
Confidence 399999999999999765422344455555555555554 234444333
No 396
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=20.26 E-value=1e+02 Score=24.49 Aligned_cols=16 Identities=6% Similarity=0.177 Sum_probs=12.0
Q ss_pred HHHHhHcCcEEEEecCC
Q 019314 82 QEVVDELGIYIVSFDRP 98 (343)
Q Consensus 82 ~~l~~~~g~~vi~~D~~ 98 (343)
..|++. |+.|+++|.-
T Consensus 53 ~~LA~~-G~~V~avD~s 68 (218)
T PRK13255 53 LWLAEQ-GHEVLGVELS 68 (218)
T ss_pred HHHHhC-CCeEEEEccC
Confidence 445554 9999999983
No 397
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=20.18 E-value=1.7e+02 Score=24.16 Aligned_cols=39 Identities=13% Similarity=0.030 Sum_probs=26.4
Q ss_pred CCeEEEecCCCCCcccchhhhhhhhhhHHHHhHcCcEEEEe
Q 019314 55 SLLHLNFHLFNGCVGSLNFTVLACLSFQEVVDELGIYIVSF 95 (343)
Q Consensus 55 ~~~vv~ihG~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~ 95 (343)
++.|++.+|.......|....|..++ +.+.++ |+.++.+
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~-~~l~~~-~~~ivl~ 159 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALA-DRLLAR-GARVVLT 159 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHH-HHHHHC-CCEEEEE
Confidence 34445544555566667777788887 888776 8888876
No 398
>PRK06762 hypothetical protein; Provisional
Probab=20.07 E-value=1.3e+02 Score=22.25 Aligned_cols=15 Identities=7% Similarity=-0.124 Sum_probs=12.9
Q ss_pred CeEEEecCCCCCccc
Q 019314 56 LLHLNFHLFNGCVGS 70 (343)
Q Consensus 56 ~~vv~ihG~~~~~~~ 70 (343)
|.+|++.|.++++..
T Consensus 2 ~~li~i~G~~GsGKS 16 (166)
T PRK06762 2 TTLIIIRGNSGSGKT 16 (166)
T ss_pred CeEEEEECCCCCCHH
Confidence 578999999998887
Done!