BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019322
(343 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O45924|ODBA_CAEEL 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Caenorhabditis elegans GN=Y39E4A.3 PE=1 SV=2
Length = 431
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 168/317 (52%), Positives = 221/317 (69%), Gaps = 2/317 (0%)
Query: 12 IPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTS 71
+P YRV + G S E ++KMY M L MD I Y++QRQGRISFY+T+
Sbjct: 59 LPIYRVTNAVGDVIDKSQDPNFDEQTSLKMYKTMTQLNIMDRILYDSQRQGRISFYMTSF 118
Query: 72 GEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHY 131
GEE ++ SAAA++ D + QYRE GVLLWRG++M+ F NQC+GN D GKGRQMP+H+
Sbjct: 119 GEEGNHVGSAAALEPQDLIYGQYREAGVLLWRGYTMENFMNQCYGNADDLGKGRQMPMHF 178
Query: 132 GSNKHNYFTVSSTIATQLPHAVGAAYALKMDR-KDACAVTYFGDGGTSEGDFHAALNFSA 190
G+ + N+ T+SS + TQLP AVG+AYA K + + AV YFGDG SEGD HAA NF+A
Sbjct: 179 GTKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYFGDGAASEGDAHAAFNFAA 238
Query: 191 VTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 250
+ P+IF CRNNG+AISTP S+Q+ DG KG AYG+ +IRVDGND LA+Y+A AR
Sbjct: 239 TLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAVYNATKEAR 298
Query: 251 EMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWW 310
+A+ RP+LIEA+TYR+GHH+TSDDST YR DE++ W P+TRF+K+I GWW
Sbjct: 299 RVAL-TNRPVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDKDHPITRFKKYITERGWW 357
Query: 311 NGDIESELRSSVRKQVI 327
N + E E + V+K+V+
Sbjct: 358 NEEKEMEWQKEVKKRVL 374
>sp|Q54M22|ODBA_DICDI 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1
Length = 441
Score = 357 bits (917), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 164/324 (50%), Positives = 226/324 (69%), Gaps = 11/324 (3%)
Query: 12 IPCYRVLDDDG---QPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYL 68
IPCY ++D +G +P D +F K IKMY M+TL MD+I Y+ QRQGRISFY+
Sbjct: 64 IPCYTIMDQEGVVSKPDQDPNFSKEE---VIKMYTTMLTLNVMDSILYDVQRQGRISFYM 120
Query: 69 TTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMP 128
T+ GEEAI+I SAAA++ D + QYRE GV +WRGF++ + NQC N+ D GKGRQMP
Sbjct: 121 TSFGEEAIHIGSAAALEMSDTIFAQYRETGVFMWRGFTINDIINQCCTNEHDLGKGRQMP 180
Query: 129 IHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNF 188
+H+GS K N T+SS + TQLP AVG++YA K+ + C + YFG+G SEGDFHAA+NF
Sbjct: 181 MHFGSRKINLQTISSPLTTQLPQAVGSSYAQKLAGEKNCTIVYFGEGAASEGDFHAAMNF 240
Query: 189 SAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKG-RAYGVRSIRVDGNDALAIYSAVH 247
+A P IF CRNN WAISTP +Q++ DG +G YG+++IRVDGND A+Y+
Sbjct: 241 AAALSTPTIFFCRNNKWAISTPSKEQYKGDGIAGRGPNGYGMKTIRVDGNDIWAVYNVTK 300
Query: 248 AAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESN 307
AR++A+ E P+LIEA+TYRVGHH+TSDDS++YR V+EI W+ ++P++R R ++
Sbjct: 301 LARKIAVEEQVPVLIEAMTYRVGHHSTSDDSSRYRTVEEINAWKEGKNPISRLRNYMNHK 360
Query: 308 GWWNGDIESEL----RSSVRKQVI 327
GWW+ E E R++VR+ ++
Sbjct: 361 GWWSDAQEKETIANARTTVRESLV 384
>sp|A5A6H9|ODBA_PANTR 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan
troglodytes GN=BCKDHA PE=2 SV=1
Length = 445
Score = 353 bits (905), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 218/327 (66%)
Query: 1 MRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQR 60
+ FI + IP YRV+D GQ S + + +K+Y M L TMD I YE+QR
Sbjct: 65 LEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQR 124
Query: 61 QGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKAD 120
QGRISFY+T GEE ++ SAAA+ N D V QYRE GVL++R + ++ F QC+GN +D
Sbjct: 125 QGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISD 184
Query: 121 YGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEG 180
GKGRQMP+HYG + ++ T+SS +ATQ+P AVGAAYA K + + YFG+G SEG
Sbjct: 185 LGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEG 244
Query: 181 DFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDAL 240
D HA NF+A E P+IF CRNNG+AISTP S+Q+R DG +G YG+ SIRVDGND
Sbjct: 245 DAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVF 304
Query: 241 AIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRF 300
A+Y+A AR A+ E +P LIEA+TYR+GHH+TSDDS+ YR VDE+ +W PV+R
Sbjct: 305 AVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPVSRL 364
Query: 301 RKWIESNGWWNGDIESELRSSVRKQVI 327
R ++ S GWW+ + E R RK+V+
Sbjct: 365 RHYLLSQGWWDEEQEKAWRKQSRKKVM 391
>sp|Q8HXY4|ODBA_MACFA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1
Length = 445
Score = 352 bits (902), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 164/327 (50%), Positives = 218/327 (66%)
Query: 1 MRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQR 60
+ FI + IP YRV+D GQ S + + +K+Y M L TMD I YE+QR
Sbjct: 65 LEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQR 124
Query: 61 QGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKAD 120
QGRISFY+T GEE ++ SAAA+ N D V QYRE GVL++R + ++ F QC+GN +D
Sbjct: 125 QGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISD 184
Query: 121 YGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEG 180
GKGRQMP+HYG + ++ T+SS +ATQ+P AVGAAYA K + + YFG+G SEG
Sbjct: 185 LGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEG 244
Query: 181 DFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDAL 240
D HA NF+A E P+IF CRNNG+AISTP S+Q+R DG +G YG+ SIRVDGND
Sbjct: 245 DAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVF 304
Query: 241 AIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRF 300
A+Y+A AR A+ E +P LIEA+TYR+GHH+TSDDS+ YR VDE+ +W P++R
Sbjct: 305 AVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRL 364
Query: 301 RKWIESNGWWNGDIESELRSSVRKQVI 327
R ++ S GWW+ + E R RK+V+
Sbjct: 365 RHYLLSQGWWDEEQEKAWRKQSRKKVM 391
>sp|P12694|ODBA_HUMAN 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo
sapiens GN=BCKDHA PE=1 SV=2
Length = 445
Score = 351 bits (901), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 163/327 (49%), Positives = 218/327 (66%)
Query: 1 MRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQR 60
+ FI + IP YRV+D GQ S + + +K+Y M L TMD I YE+QR
Sbjct: 65 LEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQR 124
Query: 61 QGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKAD 120
QGRISFY+T GEE ++ SAAA+ N D V QYRE GVL++R + ++ F QC+GN +D
Sbjct: 125 QGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISD 184
Query: 121 YGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEG 180
GKGRQMP+HYG + ++ T+SS +ATQ+P AVGAAYA K + + YFG+G SEG
Sbjct: 185 LGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEG 244
Query: 181 DFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDAL 240
D HA NF+A E P+IF CRNNG+AISTP S+Q+R DG +G YG+ SIRVDGND
Sbjct: 245 DAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVF 304
Query: 241 AIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRF 300
A+Y+A AR A+ E +P LIEA+TYR+GHH+TSDDS+ YR VDE+ +W P++R
Sbjct: 305 AVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRL 364
Query: 301 RKWIESNGWWNGDIESELRSSVRKQVI 327
R ++ S GWW+ + E R R++V+
Sbjct: 365 RHYLLSQGWWDEEQEKAWRKQSRRKVM 391
>sp|P11960|ODBA_RAT 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
(Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1
Length = 441
Score = 349 bits (895), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 162/327 (49%), Positives = 219/327 (66%)
Query: 1 MRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQR 60
+ FI + IP YRV+D GQ S + + +K+Y M L TMD I YE+QR
Sbjct: 61 LEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKLYRSMTLLNTMDRILYESQR 120
Query: 61 QGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKAD 120
QGRISFY+T GEE ++ SAAA++ D V QYRE GVL++R + ++ F QC+GN +D
Sbjct: 121 QGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVSD 180
Query: 121 YGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEG 180
GKGRQMP+HYG + ++ T+SS +ATQ+P AVGAAYA K + + YFG+G SEG
Sbjct: 181 PGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANQIVICYFGEGAASEG 240
Query: 181 DFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDAL 240
D HA NF+A E P+IF CRNNG+AISTP S+Q+R DG +G YG+ SIRVDGND
Sbjct: 241 DAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVF 300
Query: 241 AIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRF 300
A+Y+A AR A+ E +P LIEA+TYR+GHH+TSDDS+ YR VDE+ +W P++R
Sbjct: 301 AVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRL 360
Query: 301 RKWIESNGWWNGDIESELRSSVRKQVI 327
R+++ + GWW+ + E R RK+V+
Sbjct: 361 RQYLLNQGWWDEEQEKAWRKQSRKKVM 387
>sp|P50136|ODBA_MOUSE 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus
musculus GN=Bckdha PE=1 SV=1
Length = 442
Score = 348 bits (893), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 161/327 (49%), Positives = 219/327 (66%)
Query: 1 MRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQR 60
+ FI + IP YRV+D GQ S + + +K Y M L TMD I YE+QR
Sbjct: 62 LEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKFYRSMTLLNTMDRILYESQR 121
Query: 61 QGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKAD 120
+GRISFY+T GEE ++ SAAA++ D V QYRE GVL++R + ++ F +QC+GN D
Sbjct: 122 EGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVLMYRDYPLELFMSQCYGNVND 181
Query: 121 YGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEG 180
GKGRQMP+HYG + ++ T+SS +ATQ+P AVGAAYA K + + YFG+G SEG
Sbjct: 182 PGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRIVICYFGEGAASEG 241
Query: 181 DFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDAL 240
D HA NF+A E P+IF CRNNG+AISTP S+Q+R DG +G YG++SIRVDGND
Sbjct: 242 DAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIKSIRVDGNDVF 301
Query: 241 AIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRF 300
A+Y+A AR A+ E +P LIEA+TYR+GHH+TSDDS+ YR VDE+ +W P++R
Sbjct: 302 AVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRL 361
Query: 301 RKWIESNGWWNGDIESELRSSVRKQVI 327
R+++ + GWW+ + E R RK+V+
Sbjct: 362 RQYLLNQGWWDEEQEKAWRKQSRKKVM 388
>sp|P11178|ODBA_BOVIN 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos
taurus GN=BCKDHA PE=2 SV=1
Length = 455
Score = 348 bits (893), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 163/327 (49%), Positives = 217/327 (66%)
Query: 1 MRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQR 60
+ FI + IP YRV+D GQ S + + +K Y M L TMD I YE+QR
Sbjct: 75 LEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEKVLKFYKSMTLLNTMDRILYESQR 134
Query: 61 QGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKAD 120
QGRISFY+T GEE ++ SAAA+ + D V QYRE GVL++R + ++ F QC+GN +D
Sbjct: 135 QGRISFYMTNYGEEGTHVGSAAALDDTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVSD 194
Query: 121 YGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEG 180
GKGRQMP+HYG + ++ T+SS +ATQ+P AVGAAYA K + + YFG+G SEG
Sbjct: 195 LGKGRQMPVHYGCRERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEG 254
Query: 181 DFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDAL 240
D HA NF+A E P+IF CRNNG+AISTP S+Q+R DG +G YG+ SIRVDGND
Sbjct: 255 DAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGILSIRVDGNDVF 314
Query: 241 AIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRF 300
A+Y+A AR A+ E +P LIEA+TYR+GHH+TSDDS+ YR VDE+ +W P++R
Sbjct: 315 AVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRL 374
Query: 301 RKWIESNGWWNGDIESELRSSVRKQVI 327
R ++S GWW+ + E R RK+V+
Sbjct: 375 RHHLQSRGWWDDEQEKAWRKQSRKKVM 401
>sp|Q72GU1|ODBA_THET2 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=TT_C1757 PE=3 SV=1
Length = 367
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 174/289 (60%), Gaps = 4/289 (1%)
Query: 40 KMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKND-DFVVPQYREPG 98
++Y DM+ + +D + R G+ SF +G EA +A A AI+ D+V P YR+ G
Sbjct: 40 RLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHG 99
Query: 99 VLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYA 158
+ L G ++E Q KAD KGRQMP H GS N+FTV+S IA+ +P A GAA +
Sbjct: 100 LALALGIPLKELFGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAIS 159
Query: 159 LKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSD 218
+K+ R AV FGDG TSEGD++A +NF+AV AP +F+C NN +AIS Q S
Sbjct: 160 MKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFVCENNFYAISVDYRHQTHSP 219
Query: 219 GAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA-IGEGRPILIEALTYRVGHHTTSDD 277
K A+G+ VDG D LA Y V A E A GEG P L+E YR G H+++DD
Sbjct: 220 TIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEG-PSLVELRVYRYGPHSSADD 278
Query: 278 STKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQV 326
++YRP +E+ +WR +DP+ RFR+++E+ G WN + E ++R +R ++
Sbjct: 279 DSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAEL 326
>sp|Q5SLR4|ODBA_THET8 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
GN=TTHA0229 PE=1 SV=1
Length = 367
Score = 221 bits (563), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 173/289 (59%), Gaps = 4/289 (1%)
Query: 40 KMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKND-DFVVPQYREPG 98
++Y DM+ + +D + R G+ SF +G EA +A A AI+ D+V P YR+ G
Sbjct: 40 RLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHG 99
Query: 99 VLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYA 158
+ L G ++E Q KAD KGRQMP H GS N+FTV+S IA+ +P A GAA +
Sbjct: 100 LALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAIS 159
Query: 159 LKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSD 218
+K+ R AV FGDG TSEGD++A +NF+AV AP +FI NN +AIS Q S
Sbjct: 160 MKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSP 219
Query: 219 GAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA-IGEGRPILIEALTYRVGHHTTSDD 277
K A+G+ VDG D LA Y V A E A GEG P L+E YR G H+++DD
Sbjct: 220 TIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEG-PSLVELRVYRYGPHSSADD 278
Query: 278 STKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQV 326
++YRP +E+ +WR +DP+ RFR+++E+ G WN + E ++R +R ++
Sbjct: 279 DSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAEL 326
>sp|P60090|ODPA_STAAW Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MW2) GN=pdhA PE=3 SV=1
Length = 370
Score = 214 bits (545), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 180/313 (57%), Gaps = 13/313 (4%)
Query: 8 SEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFY 67
++ + ++LD++G + +++ +++ MV + +D RQGR+ FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 68 LTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQM 127
T+G+EA +AS A++ +D+++P YR+ ++W G + E F + KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPLTE----AFLFSRGHFKGNQF 133
Query: 128 PIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALN 187
P N + I Q A G A+ALK K+A A+TY GDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 188 FSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVH 247
F+A +AP IF+ +NN +AISTP S Q ++ K A G+ I+VDG DALA+Y A
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATK 248
Query: 248 AAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIE 305
AR+ A+ GEG P LIE +TYR G HT + DD T+YR DE W +DP+ RFRK++E
Sbjct: 249 EARDRAVAGEG-PTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLE 306
Query: 306 SNGWWNGDIESEL 318
+ G WN D E+E+
Sbjct: 307 NKGLWNEDKENEV 319
>sp|Q6GAC1|ODPA_STAAS Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MSSA476) GN=pdhA PE=3 SV=1
Length = 370
Score = 214 bits (545), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 180/313 (57%), Gaps = 13/313 (4%)
Query: 8 SEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFY 67
++ + ++LD++G + +++ +++ MV + +D RQGR+ FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 68 LTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQM 127
T+G+EA +AS A++ +D+++P YR+ ++W G + E F + KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPLTE----AFLFSRGHFKGNQF 133
Query: 128 PIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALN 187
P N + I Q A G A+ALK K+A A+TY GDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 188 FSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVH 247
F+A +AP IF+ +NN +AISTP S Q ++ K A G+ I+VDG DALA+Y A
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATK 248
Query: 248 AAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIE 305
AR+ A+ GEG P LIE +TYR G HT + DD T+YR DE W +DP+ RFRK++E
Sbjct: 249 EARDRAVAGEG-PTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLE 306
Query: 306 SNGWWNGDIESEL 318
+ G WN D E+E+
Sbjct: 307 NKGLWNEDKENEV 319
>sp|Q820A6|ODPA_STAAN Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain N315) GN=pdhA PE=1 SV=1
Length = 370
Score = 214 bits (545), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 180/313 (57%), Gaps = 13/313 (4%)
Query: 8 SEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFY 67
++ + ++LD++G + +++ +++ MV + +D RQGR+ FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 68 LTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQM 127
T+G+EA +AS A++ +D+++P YR+ ++W G + E F + KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPLTE----AFLFSRGHFKGNQF 133
Query: 128 PIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALN 187
P N + I Q A G A+ALK K+A A+TY GDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 188 FSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVH 247
F+A +AP IF+ +NN +AISTP S Q ++ K A G+ I+VDG DALA+Y A
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATK 248
Query: 248 AAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIE 305
AR+ A+ GEG P LIE +TYR G HT + DD T+YR DE W +DP+ RFRK++E
Sbjct: 249 EARDRAVAGEG-PTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLE 306
Query: 306 SNGWWNGDIESEL 318
+ G WN D E+E+
Sbjct: 307 NKGLWNEDKENEV 319
>sp|P60089|ODPA_STAAM Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1
Length = 370
Score = 214 bits (545), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 180/313 (57%), Gaps = 13/313 (4%)
Query: 8 SEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFY 67
++ + ++LD++G + +++ +++ MV + +D RQGR+ FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 68 LTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQM 127
T+G+EA +AS A++ +D+++P YR+ ++W G + E F + KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPLTE----AFLFSRGHFKGNQF 133
Query: 128 PIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALN 187
P N + I Q A G A+ALK K+A A+TY GDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 188 FSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVH 247
F+A +AP IF+ +NN +AISTP S Q ++ K A G+ I+VDG DALA+Y A
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATK 248
Query: 248 AAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIE 305
AR+ A+ GEG P LIE +TYR G HT + DD T+YR DE W +DP+ RFRK++E
Sbjct: 249 EARDRAVAGEG-PTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLE 306
Query: 306 SNGWWNGDIESEL 318
+ G WN D E+E+
Sbjct: 307 NKGLWNEDKENEV 319
>sp|Q5HGZ1|ODPA_STAAC Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain COL) GN=pdhA PE=3 SV=1
Length = 370
Score = 214 bits (545), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 180/313 (57%), Gaps = 13/313 (4%)
Query: 8 SEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFY 67
++ + ++LD++G + +++ +++ MV + +D RQGR+ FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 68 LTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQM 127
T+G+EA +AS A++ +D+++P YR+ ++W G + E F + KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPLTE----AFLFSRGHFKGNQF 133
Query: 128 PIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALN 187
P N + I Q A G A+ALK K+A A+TY GDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 188 FSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVH 247
F+A +AP IF+ +NN +AISTP S Q ++ K A G+ I+VDG DALA+Y A
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATK 248
Query: 248 AAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIE 305
AR+ A+ GEG P LIE +TYR G HT + DD T+YR DE W +DP+ RFRK++E
Sbjct: 249 EARDRAVAGEG-PTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLE 306
Query: 306 SNGWWNGDIESEL 318
+ G WN D E+E+
Sbjct: 307 NKGLWNEDKENEV 319
>sp|Q6GHZ2|ODPA_STAAR Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MRSA252) GN=pdhA PE=3 SV=1
Length = 370
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 179/313 (57%), Gaps = 13/313 (4%)
Query: 8 SEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFY 67
++ + ++LD++G + +++ +++ MV + +D RQGR+ FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 68 LTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQM 127
T+G+EA +AS A++ +D+++P YR+ ++W G + E F + KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPLTE----AFLFSRGHFKGNQF 133
Query: 128 PIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALN 187
P N + I Q G A+ALK K+A A+TY GDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQTAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 188 FSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVH 247
F+A +AP IF+ +NN +AISTP S Q ++ K A G+ I+VDG DALA+Y A
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATK 248
Query: 248 AAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIE 305
AR+ A+ GEG P LIE +TYR G HT + DD T+YR DE W +DP+ RFRK++E
Sbjct: 249 EARDRAVAGEG-PTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLE 306
Query: 306 SNGWWNGDIESEL 318
+ G WN D E+E+
Sbjct: 307 NKGLWNEDKENEV 319
>sp|Q8CPN3|ODPA_STAES Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1
Length = 370
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 182/321 (56%), Gaps = 13/321 (4%)
Query: 8 SEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFY 67
++ + ++LD+DG + +++ +++ MV + +D RQGR+ FY
Sbjct: 18 TQSKFEMVQILDEDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 68 LTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQM 127
T+G+EA +AS A++++DF++P YR+ ++W G + + F + KG Q
Sbjct: 78 APTAGQEASQLASQYALESEDFILPGYRDVPQIIWHGLPLTD----AFLFSRGHFKGNQF 133
Query: 128 PIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALN 187
P N + I Q G A+ LK K+A A+TY GDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 188 FSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVH 247
F++ +AP IF+ +NN +AISTP S Q ++ K + G+ I+VDG DALA+Y A
Sbjct: 189 FASAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATL 248
Query: 248 AAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIE 305
ARE A+ GEG P +IE LTYR G HT + DD T+YR DE W +DP+ RFRK++E
Sbjct: 249 EARERAVAGEG-PTVIETLTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYLE 306
Query: 306 SNGWWNGDIESELRSSVRKQV 326
+ G WN D E+E+ + ++
Sbjct: 307 AKGLWNEDKENEVVERAKSEI 327
>sp|Q5HQ76|ODPA_STAEQ Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3
SV=1
Length = 370
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 182/321 (56%), Gaps = 13/321 (4%)
Query: 8 SEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFY 67
++ + ++LD+DG + +++ +++ MV + +D RQGR+ FY
Sbjct: 18 TQSKFEMVQILDEDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 68 LTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQM 127
T+G+EA +AS A++++DF++P YR+ ++W G + + F + KG Q
Sbjct: 78 APTAGQEASQLASQYALESEDFILPGYRDVPQIIWHGLPLTD----AFLFSRGHFKGNQF 133
Query: 128 PIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALN 187
P N + I Q G A+ LK K+A A+TY GDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 188 FSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVH 247
F++ +AP IF+ +NN +AISTP S Q ++ K + G+ I+VDG DALA+Y A
Sbjct: 189 FASAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATL 248
Query: 248 AAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIE 305
ARE A+ GEG P +IE LTYR G HT + DD T+YR DE W +DP+ RFRK++E
Sbjct: 249 EARERAVAGEG-PTVIETLTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYLE 306
Query: 306 SNGWWNGDIESELRSSVRKQV 326
+ G WN D E+E+ + ++
Sbjct: 307 AKGLWNEDKENEVVERAKSEI 327
>sp|P21873|ODPA_GEOSE Pyruvate dehydrogenase E1 component subunit alpha OS=Geobacillus
stearothermophilus GN=pdhA PE=1 SV=2
Length = 369
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 185/324 (57%), Gaps = 15/324 (4%)
Query: 6 ESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRIS 65
E E+ P +++L+++G+ + + ++S+ ++ MV + +D RQGR+
Sbjct: 15 EKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLG 74
Query: 66 FYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGR 125
FY T+G+EA IAS A++ +DF++P YR+ ++W G + Q F + G
Sbjct: 75 FYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPL----YQAFLFSRGHFHGN 130
Query: 126 QMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAA 185
Q+P N I Q A G A LKM K A A+TY GDGGTS+GDF+
Sbjct: 131 QIP-----EGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEG 185
Query: 186 LNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSA 245
+NF+ +AP IF+ +NN +AISTP+ Q + K A G+ I+VDG D LA+Y+A
Sbjct: 186 INFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAA 245
Query: 246 VHAAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYRPVD-EIEWWRTTQDPVTRFRK 302
V AARE AI GEG P LIE L +R G HT S DD T+YR + E EW + +DP+ RFRK
Sbjct: 246 VKAARERAINGEG-PTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAK--KDPLVRFRK 302
Query: 303 WIESNGWWNGDIESELRSSVRKQV 326
++E+ G W+ + E+ + ++++
Sbjct: 303 FLEAKGLWSEEEENNVIEQAKEEI 326
>sp|Q9I1M2|ODBA_PSEAE 2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=bkdA1 PE=3 SV=1
Length = 410
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 181/341 (53%), Gaps = 13/341 (3%)
Query: 5 SESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRI 64
+E+S+ RVLDDDG + ++S ++ M+ + D AQRQ ++
Sbjct: 45 AETSDLAYSLVRVLDDDGHAVGPWN-PQLSNEQLLRGMRAMLKTRLFDARMLTAQRQKKL 103
Query: 65 SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKG 124
SFY+ GEEAI A A+++ D P YR+ G+L+ R + + + Q N+AD KG
Sbjct: 104 SFYMQCLGEEAIATAHTLALRDGDMCFPTYRQQGILITREYPLVDMICQLLSNEADPLKG 163
Query: 125 RQMPIHYGSNKHNYFTVSSTIATQLPHAVG--AAYALKMDRKDACAVTYFGDGGTSEGDF 182
RQ+PI Y S + +F++S +ATQ AVG A A+K D + A A + GDG T+E DF
Sbjct: 164 RQLPIMYSSKEAGFFSISGNLATQFIQAVGWGMASAIKGDTRIASA--WIGDGATAESDF 221
Query: 183 HAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVV--KGRAYGVRSIRVDGNDAL 240
H AL F+ V APVI NN WAIST +G +G G+ S+RVDGND L
Sbjct: 222 HTALTFAHVYRAPVILNVVNNQWAIST-FQAIAGGEGTTFANRGVGCGIASLRVDGNDFL 280
Query: 241 AIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRT--TQDPVT 298
A+Y+A A E A P LIE +TYR G H+TSDD +KYRP D+ W DP+
Sbjct: 281 AVYAASEWAAERARRNLGPSLIEWVTYRAGPHSTSDDPSKYRPADD---WTNFPLGDPIA 337
Query: 299 RFRKWIESNGWWNGDIESELRSSVRKQVILVSLTISKYGLL 339
R ++ + G W+ + ++ +V+ +G L
Sbjct: 338 RLKRHMIGLGIWSEEQHEATHKALEAEVLAAQKQAESHGTL 378
>sp|P37940|ODBA_BACSU 2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis
(strain 168) GN=bfmBAA PE=1 SV=1
Length = 330
Score = 201 bits (511), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 169/288 (58%), Gaps = 5/288 (1%)
Query: 38 AIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKND-DFVVPQYRE 96
A+ MY M+ + +D + R G+I F ++ G+EA + +A A+ + D+V+P YR+
Sbjct: 16 AVDMYRTMLLARKIDERMWLLNRSGKIPFVISCQGQEAAQVGAAFALDREMDYVLPYYRD 75
Query: 97 PGVLLWRGFSMQEFANQCFGNKADYGKG-RQMPIHYGSNKHNYFTVSSTIATQLPHAVGA 155
GV+L G + ++ F AD G RQMP H+G K+ T SS + TQ+PHAVG
Sbjct: 76 MGVVLAFGMTAKDLMMSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGI 135
Query: 156 AYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQF 215
A A +M++KD A FG+G +++GDFH NF+AV + PVIF+C NN +AIS P Q
Sbjct: 136 ALAGRMEKKDIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISVPYDKQV 195
Query: 216 RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA-IGEGRPILIEALTYRVGHHTT 274
+ + YG+ + V+GND L +Y AV ARE A GEG P LIE ++YR+ H++
Sbjct: 196 ACENISDRAIGYGMPGVTVNGNDPLEVYQAVKEARERARRGEG-PTLIETISYRLTPHSS 254
Query: 275 SDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSV 322
DD + YR +E+E + + DP+ ++ +++ G + +IE + +
Sbjct: 255 DDDDSSYRGREEVEEAKKS-DPLLTYQAYLKETGLLSDEIEQTMLDEI 301
>sp|O06161|BKDA_MYCTU 3-methyl-2-oxobutanoate dehydrogenase subunit alpha
OS=Mycobacterium tuberculosis GN=bkdA PE=1 SV=1
Length = 367
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 166/309 (53%), Gaps = 11/309 (3%)
Query: 16 RVLDDDGQPFPDSSFVK-VSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEE 74
+++ DG P + + + + E +Y MV + +DT F QRQG ++ Y G+E
Sbjct: 21 QLVGPDGTPTAERRYHRDLPEETLRWLYEMMVVTRELDTEFVNLQRQGELALYTPCRGQE 80
Query: 75 AINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSN 134
A + +AA ++ D++ PQYRE GV L RG G + G Q
Sbjct: 81 AAQVGAAACLRKTDWLFPQYRELGVYLVRGIPPGHVGVAWRGT---WHGGLQF------T 131
Query: 135 KHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEA 194
+S I TQ HAVGAA A + +D+ V + GDG TSEGD H ALNF+AV
Sbjct: 132 TKCCAPMSVPIGTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTT 191
Query: 195 PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI 254
P +F +NN WAIS P+S Q + K YG+ IRVDGND LA Y+ + A A
Sbjct: 192 PCVFYVQNNQWAISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARAR 251
Query: 255 GEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDI 314
P LIEA+TYR+G HTT+DD T+YR +E++ W T DP+ R+R +++ G W+ +
Sbjct: 252 AGDGPTLIEAVTYRLGPHTTADDPTRYRSQEEVDRW-ATLDPIPRYRTYLQDQGLWSQRL 310
Query: 315 ESELRSSVR 323
E ++ + +
Sbjct: 311 EEQVTARAK 319
>sp|Q4MTG0|ODPA_BACCE Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
cereus GN=pdhA PE=1 SV=3
Length = 371
Score = 195 bits (496), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 178/316 (56%), Gaps = 15/316 (4%)
Query: 14 CYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGE 73
++L++ G+ +++ ++S+ ++ MV + +D RQGR+ FY T+G+
Sbjct: 25 TLQILNEKGEVVNEAAMPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLGFYAPTAGQ 84
Query: 74 EAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGS 133
EA +AS A++ +DF++P YR+ L+W G + Q F + G QMP +
Sbjct: 85 EASQLASHFALEAEDFILPGYRDVPQLVWHGLPLY----QAFLFSRGHFMGNQMPENV-- 138
Query: 134 NKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTE 193
N I Q+ G A +K+ K + A+TY GDGG S+GDF+ +NF+ +
Sbjct: 139 ---NALAPQIIIGAQIIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFK 195
Query: 194 APVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA 253
AP IF+ +NN +AISTP+ Q + K A G+ I+VDG D LA+Y+A ARE A
Sbjct: 196 APAIFVVQNNRYAISTPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYAATAFARERA 255
Query: 254 I-GEGRPILIEALTYRVGHHTTS-DDSTKYRPVD-EIEWWRTTQDPVTRFRKWIESNGWW 310
+ GEG P LIE LT+R G HT + DD T+YR D E EW + +DP+ RFR ++E+ G W
Sbjct: 256 VNGEG-PTLIETLTFRYGPHTMAGDDPTRYRTKDIENEWEQ--KDPIVRFRAFLENKGLW 312
Query: 311 NGDIESELRSSVRKQV 326
+ ++E ++ ++ +
Sbjct: 313 SQEVEEKVIEEAKEDI 328
>sp|P21881|ODPA_BACSU Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
subtilis (strain 168) GN=pdhA PE=1 SV=3
Length = 371
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 181/320 (56%), Gaps = 13/320 (4%)
Query: 9 EERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYL 68
+++ +++L++ G+ +++ +++ ++ MV + +D RQGR+ FY
Sbjct: 20 KKQFETFQILNEKGEVVNEAAMPDLTDDQLKELMRRMVFTRVLDQRSISLNRQGRLGFYA 79
Query: 69 TTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMP 128
T+G+EA IA+ A++ +DFV+P YR+ L+W G + Q F + +G QMP
Sbjct: 80 PTAGQEASQIATHFALEKEDFVLPGYRDVPQLIWHGLPL----YQAFLFSRGHFRGNQMP 135
Query: 129 IHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNF 188
+ N + I Q G A LK K A A+TY GDGG S+GDF+ +NF
Sbjct: 136 -----DDVNALSPQIIIGAQYIQTAGVALGLKKRGKKAVAITYTGDGGASQGDFYEGINF 190
Query: 189 SAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHA 248
+ +AP IF+ +NN +AISTP+ Q ++ K A G+ ++VDG D LA+Y+A
Sbjct: 191 AGAYKAPAIFVVQNNRYAISTPVEKQSAAETIAQKAVAAGIVGVQVDGMDPLAVYAATAE 250
Query: 249 AREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIES 306
ARE AI GEG P LIE LT+R G HT + DD TKYR EIE +DP+ RFR ++E+
Sbjct: 251 ARERAINGEG-PTLIETLTFRYGPHTMAGDDPTKYR-TKEIENEWEQKDPLVRFRAFLEN 308
Query: 307 NGWWNGDIESELRSSVRKQV 326
G W+ + E+++ ++++
Sbjct: 309 KGLWSEEEEAKVIEDAKEEI 328
>sp|P09060|ODBA_PSEPU 2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida
GN=bkdA1 PE=1 SV=2
Length = 410
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 158/305 (51%), Gaps = 12/305 (3%)
Query: 45 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 104
M+ + D+ AQRQ ++SFY+ + GEEAI A A+ D P YR+ +L+ R
Sbjct: 84 MLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARD 143
Query: 105 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK 164
S+ E Q N+ D KGRQ+PI Y + +FT+S +ATQ AVG A A +
Sbjct: 144 VSLVEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGD 203
Query: 165 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS----DGA 220
A + GDG T+E DFH AL F+ V APVI NN WAIST F++ +
Sbjct: 204 TKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAIST-----FQAIAGGEST 258
Query: 221 VVKGRAY--GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDS 278
GR G+ S+RVDGND +A+Y+A A E A P LIE +TYR G H+TSDD
Sbjct: 259 TFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDP 318
Query: 279 TKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQVILVSLTISKYGL 338
+KYRP D+ + DP+ R ++ + G W+ + + VI +YG
Sbjct: 319 SKYRPADDWSHF-PLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGT 377
Query: 339 LQLQH 343
L H
Sbjct: 378 LANGH 382
>sp|P35485|ODPA_ACHLA Pyruvate dehydrogenase E1 component subunit alpha (Fragment)
OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1
Length = 345
Score = 171 bits (433), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 153/294 (52%), Gaps = 11/294 (3%)
Query: 19 DDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINI 78
D +G+ + K+ + +KMY V + D + QRQGR+ Y G+EA I
Sbjct: 1 DQNGKVVNEKMEPKLPKETLLKMYKTAVLGRNADIKALQYQRQGRMLTYAPNMGQEAAQI 60
Query: 79 ASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNY 138
AAA++ D+ P YRE LL+RG ++ +GN+ K + I
Sbjct: 61 GMAAAMEPQDWNSPMYRELNTLLYRGDKLENVFLYWYGNERGSIKPEGVKI--------- 111
Query: 139 FTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIF 198
+ I +Q A G A A K+ + + GDGGT+ G+F+ LNF+A +APV+
Sbjct: 112 LPTNIIIGSQSNIAAGLAMASKIRKTNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVA 171
Query: 199 ICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGR 258
+ +NN WAISTP+ S+ KG A+G+ I+VDGND LA+Y A A + A
Sbjct: 172 VIQNNQWAISTPVRKASNSETLAQKGVAFGIPYIQVDGNDMLAMYVASKEAMDRARKGDG 231
Query: 259 PILIEALTYRVGHHTTSDDSTK-YRPVDEIEWWRTTQDPVTRFRKWIESNGWWN 311
P LIEA TYR+G HTTSDD YR +E W +D + RF+ ++ + G+W+
Sbjct: 232 PTLIEAFTYRMGPHTTSDDPCSIYRTKEEENEW-AKKDQIARFKTYLINKGYWS 284
>sp|P47516|ODPA_MYCGE Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=pdhA PE=3 SV=1
Length = 358
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 159/320 (49%), Gaps = 12/320 (3%)
Query: 9 EERIP--CYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISF 66
+ ++P Y+V D++G+ + + +++ Y M + MD QR G++
Sbjct: 6 KNKVPTTLYQVYDNEGKLIDPNHKITLTDEQLKHAYYLMNLSRMMDKKMLVWQRAGKMLN 65
Query: 67 YLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQ 126
+ GEEA+ + + +D+V P +R ++L+RG ++ GN+ KG Q
Sbjct: 66 FAPNLGEEALQVGMGLGLNENDWVCPTFRSGALMLYRGVKPEQLLLYWNGNE----KGSQ 121
Query: 127 MPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAAL 186
+ Y + ++ TI Q HA G Y L ++ AVT GDGGT+EG+F+ A+
Sbjct: 122 IDAKYKT-----LPINITIGAQYSHAAGLGYMLHYKKQPNVAVTMIGDGGTAEGEFYEAM 176
Query: 187 NFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAV 246
N +++ + +F NN +AIST + VK A G+ +RVDGND +A Y A+
Sbjct: 177 NIASIHKWNTVFCINNNQFAISTRTKLESAVSDLSVKAIACGIPRVRVDGNDLIASYEAM 236
Query: 247 HAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIES 306
A A G P+LIE +YR G HTTSDD + YR E E + DPV R R ++
Sbjct: 237 QDAANYARGGNGPVLIEFFSYRQGPHTTSDDPSIYRTKQEEEEGMKS-DPVKRLRNFLFD 295
Query: 307 NGWWNGDIESELRSSVRKQV 326
N E E+ S + +++
Sbjct: 296 RSILNQAQEEEMFSKIEQEI 315
>sp|P75390|ODPA_MYCPN Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=pdhA PE=3 SV=1
Length = 358
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 153/320 (47%), Gaps = 12/320 (3%)
Query: 9 EERIP--CYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISF 66
+ ++P Y+V D++G+ + + +S + M + MD QR G++
Sbjct: 6 KNKVPTTLYQVYDNEGKLMDPNHKITLSNEQLKHAFYLMNLSRIMDKKMLVWQRAGKMLN 65
Query: 67 YLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQ 126
+ GEEA+ + + +D+ P +R ++L+RG ++ GN+ G +
Sbjct: 66 FAPNLGEEALQVGMGMGLNENDWFCPTFRSGALMLYRGVKPEQLLLYWNGNE----NGSK 121
Query: 127 MPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAAL 186
+ Y + ++ TI Q HA G Y L + AVT GDGGT+EG+F+ A+
Sbjct: 122 IEAKYKT-----LPINITIGAQYSHAAGLGYMLHYKKLPNVAVTMIGDGGTAEGEFYEAM 176
Query: 187 NFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAV 246
N +++ + +F NN +AIST + K A + IRVDGND +A Y A+
Sbjct: 177 NIASIHKWNSVFCINNNQFAISTRTKLESAVSDLSTKAIAVNIPRIRVDGNDLIASYEAM 236
Query: 247 HAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIES 306
H A A P+LIE ++R G HTTSDD + YR +E E DPV R R ++
Sbjct: 237 HEAANYARSGNGPVLIEFFSWRQGPHTTSDDPSIYRTKEE-EAEAMKSDPVKRLRNFLFD 295
Query: 307 NGWWNGDIESELRSSVRKQV 326
G E E+ + + ++V
Sbjct: 296 RGILTPQQEEEMVAKIEQEV 315
>sp|P52901|ODPA1_ARATH Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Arabidopsis thaliana GN=E1 ALPHA PE=1 SV=2
Length = 389
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 150/305 (49%), Gaps = 10/305 (3%)
Query: 26 PDSSFVKVSEGVAIKMYNDMVTLQTM----DTIFYEAQRQGRISFYLTTSGEEAINIASA 81
P S V+ S + + M ++ M D+++ +G Y G+EA+ I
Sbjct: 47 PPSRSVESSSQELLDFFRTMALMRRMEIAADSLYKAKLIRGFCHLY---DGQEAVAIGME 103
Query: 82 AAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTV 141
AAI D ++ YR+ + L RG S+ E ++ G +A KG+ +H+ + +++
Sbjct: 104 AAITKKDAIITAYRDHCIFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGG 163
Query: 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR 201
+ Q+P G A+A K ++++A +GDG ++G ALN SA+ + P I +C
Sbjct: 164 HGIVGAQVPLGCGIAFAQKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCE 223
Query: 202 NNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPIL 261
NN + + T +S +G V ++VDG DA A+ A A++ A+ +G PI+
Sbjct: 224 NNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDAFAVKQACKFAKQHALEKG-PII 280
Query: 262 IEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSS 321
+E TYR H+ SD + YR DEI R +DP+ R +K + S+ ++
Sbjct: 281 LEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKE 340
Query: 322 VRKQV 326
+RK+V
Sbjct: 341 IRKEV 345
>sp|P26267|ODPA_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type I,
mitochondrial OS=Ascaris suum PE=1 SV=1
Length = 396
Score = 142 bits (357), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 20/309 (6%)
Query: 26 PDSSFVKVSEGVAIKMYNDMVTLQTMDT----IFYEAQRQGRISFYLTTSGEEAINIASA 81
PD + V V++ A+ Y M+T++ M++ ++ E + +G Y SG+EA + +
Sbjct: 46 PDIN-VHVTKEDAVHYYTQMLTIRRMESAAGNLYKEKKVRGFCHLY---SGQEACAVGTK 101
Query: 82 AAIKNDDFVVPQYREPGVLLWRGFS----MQEFANQCFGNKADYGKGRQMPIHYGSNKHN 137
AA+ D V YR G G S + E + GN YGKG M + YG N
Sbjct: 102 AAMDAGDAAVTAYRCHGWTYLSGSSVAKVLCELTGRITGNV--YGKGGSMHM-YG---EN 155
Query: 138 YFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVI 197
++ + + Q P G A+A+K ++ +T FGDG T++G ++N + + + PV+
Sbjct: 156 FYGGNGIVGAQQPLGTGIAFAMKYRKEKNVCITMFGDGATNQGQLFESMNMAKLWDLPVL 215
Query: 198 FICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEG 257
++C NNG+ + T + S +G V I VDG D LA+ AV A+E
Sbjct: 216 YVCENNGYGMGTAAARSSASTDYYTRGDY--VPGIWVDGMDVLAVRQAVRWAKEWCNAGK 273
Query: 258 RPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESE 317
P++IE TYR H+ SD T YR +E++ R T+DP+T F+ I + G D E
Sbjct: 274 GPLMIEMATYRYSGHSMSDPGTSYRTREEVQEVRKTRDPITGFKDKIVTAGLVTEDEIKE 333
Query: 318 LRSSVRKQV 326
+ VRK++
Sbjct: 334 IDKQVRKEI 342
>sp|P26268|ODPT_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type II,
mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1
Length = 391
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 20/309 (6%)
Query: 26 PDSSFVKVSEGVAIKMYNDMVTLQTMDT----IFYEAQRQGRISFYLTTSGEEAINIASA 81
PD + + V++ A++ Y M T++ M+T ++ E + +G Y SG+EA +
Sbjct: 41 PDVN-MHVTKEDALRYYTQMQTIRRMETAAGNLYKEKKVRGFCHLY---SGQEACAVGMK 96
Query: 82 AAIKNDDFVVPQYREPGVLLWRGFS----MQEFANQCFGNKADYGKGRQMPIHYGSNKHN 137
AA++ D + YR G G + E + GN YGKG M + YG N
Sbjct: 97 AAMEPGDAAITAYRCHGWTYLSGSPVAKVLCELTGRITGNV--YGKGGSMHM-YG---EN 150
Query: 138 YFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVI 197
++ + + Q P G A+A+K ++ +T FGDG T++G + ++N + + E PV+
Sbjct: 151 FYGGNGIVGAQQPLGTGIAFAMKYKKQKNVCITLFGDGATNQGQLYESMNMAKLWELPVL 210
Query: 198 FICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEG 257
++C NNG+ + T + S +G V VDG D LA+ A+ +E
Sbjct: 211 YVCENNGYGMGTSAARSSASTDYYTRGDY--VPGFWVDGMDVLAVRQAIRWGKEWCNAGK 268
Query: 258 RPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESE 317
P++IE TYR G H+ SD T YR +EI+ R T+DP+T F+ I + G D E
Sbjct: 269 GPLMIEMATYRYGGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDKIVTAGLVTEDELKE 328
Query: 318 LRSSVRKQV 326
+ +RK+V
Sbjct: 329 VDKEIRKEV 337
>sp|Q8H1Y0|ODPA2_ARATH Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2
Length = 393
Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 144/303 (47%), Gaps = 10/303 (3%)
Query: 28 SSFVKVSEGVAIKMYNDMVTLQTM----DTIFYEAQRQGRISFYLTTSGEEAINIASAAA 83
S V+ S + + DM ++ M D+++ +G Y G+EA+ + AA
Sbjct: 53 SRSVETSSEEILAFFRDMARMRRMEIAADSLYKAKLIRGFCHLY---DGQEALAVGMEAA 109
Query: 84 IKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSS 143
I D ++ YR+ + RG + + ++ G K G+ +H+ +++
Sbjct: 110 ITKKDAIITSYRDHCTFIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHG 169
Query: 144 TIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN 203
+ Q+P G A+A K ++ +A +GDG ++G ALN SA+ + P I +C NN
Sbjct: 170 IVGAQIPLGCGLAFAQKYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENN 229
Query: 204 GWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263
+ + T +S +G V ++VDG DALA+ A A+E A+ G PI++E
Sbjct: 230 HYGMGTATWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKNG-PIILE 286
Query: 264 ALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVR 323
TYR H+ SD + YR DEI R +DP+ R RK + ++ ++ +R
Sbjct: 287 MDTYRYHGHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKDMEKEIR 346
Query: 324 KQV 326
K+V
Sbjct: 347 KEV 349
>sp|P16387|ODPA_YEAST Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDA1 PE=1 SV=2
Length = 420
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 138/283 (48%), Gaps = 18/283 (6%)
Query: 26 PDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAI 84
PD S+ + S+ ++MY DMV ++ M+ + +I F + G+EAI + AI
Sbjct: 70 PDLSY-ETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIENAI 128
Query: 85 KNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKA--DYGKGRQM----PIHYGSNKHNY 138
D ++ YR G RG S++ + G +A YGKG M P YG N
Sbjct: 129 TKLDSIITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAPGFYGGN---- 184
Query: 139 FTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIF 198
+ Q+P G A+A + +DAC+ T +GDG +++G + N + + PV+F
Sbjct: 185 ----GIVGAQVPLGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVF 240
Query: 199 ICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGR 258
C NN + + T S +G+ + ++V+G D LA+Y A A++ +
Sbjct: 241 CCENNKYGMGTAASRSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWCLSGKG 298
Query: 259 PILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFR 301
P+++E TYR G H+ SD T YR DEI+ R+ DP+ +
Sbjct: 299 PLVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLK 341
>sp|Q6Z5N4|ODPA1_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os02g0739600 PE=2
SV=1
Length = 390
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 142/305 (46%), Gaps = 10/305 (3%)
Query: 26 PDSSFVKVSEGVAIKMYNDMVTLQTM----DTIFYEAQRQGRISFYLTTSGEEAINIASA 81
P S V + + + DM ++ M D+++ +G Y G+EA+ +
Sbjct: 48 PPSRDVTTTPAELLTFFRDMSVMRRMEIAADSLYKAKLIRGFCHLY---DGQEAVAVGME 104
Query: 82 AAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTV 141
AAI D ++ YR+ L RG + + G +A +G+ +H+ N++
Sbjct: 105 AAITRSDSIITAYRDHCTYLARGGDLVSAFAELMGRQAGCSRGKGGSMHFYKKDANFYGG 164
Query: 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR 201
+ Q+P G A+A K +++ +GDG ++G ALN SA+ + P I +C
Sbjct: 165 HGIVGAQVPLGCGLAFAQKYRKEETATFALYGDGAANQGQLFEALNISALWKLPAILVCE 224
Query: 202 NNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPIL 261
NN + + T +S +G V ++VDG D LA+ A A+E AI G PI+
Sbjct: 225 NNHYGMGTAEWRAAKSPAYYKRGDY--VPGLKVDGMDVLAVKQACKFAKEHAIANG-PIV 281
Query: 262 IEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSS 321
+E TYR H+ SD + YR DEI R +DP+ R RK I ++ ++
Sbjct: 282 LEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLILAHDLATAAELKDMEKE 341
Query: 322 VRKQV 326
+RK+V
Sbjct: 342 IRKEV 346
>sp|P52903|ODPA_SOLTU Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Solanum tuberosum PE=1 SV=1
Length = 391
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 150/314 (47%), Gaps = 13/314 (4%)
Query: 26 PDSSFVKVSEGVAIKMYNDMVTLQTM----DTIFYEAQRQGRISFYLTTSGEEAINIASA 81
P S V+ S + + DM ++ M D+++ +G Y G+EA+ +
Sbjct: 49 PPSRSVETSPKELMTFFKDMTEMRRMEIAADSLYKAKLIRGFCHLY---DGQEAVAVGME 105
Query: 82 AAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTV 141
AAI D ++ YR+ + L RG ++ E + G + +G+ +H+ + ++
Sbjct: 106 AAITKKDCIITAYRDHCIFLGRGGTLVEAFAELMGRRDGCSRGKGGSMHFYKKESGFYGG 165
Query: 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR 201
+ Q+P +G A+A K ++D +GDG ++G ALN +A+ + P I +C
Sbjct: 166 HGIVGAQVPLGIGLAFAQKYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCE 225
Query: 202 NNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPIL 261
NN + + T +S +G V +RVDG D A+ A A++ A+ G PI+
Sbjct: 226 NNHYGMGTAEWRAAKSPAYYKRGDY--VPGLRVDGMDVFAVKQACTFAKQHALKNG-PII 282
Query: 262 IEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSS 321
+E TYR H+ SD + YR DEI R +DPV R R I ++ N E+EL+
Sbjct: 283 LEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPVERIRSLILAH---NIATEAELKDI 339
Query: 322 VRKQVILVSLTISK 335
++ +V I+K
Sbjct: 340 EKENRKVVDEAIAK 353
>sp|Q10489|ODPA_SCHPO Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pda1 PE=1 SV=1
Length = 409
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 159/345 (46%), Gaps = 24/345 (6%)
Query: 2 RFISESSEERIPCYRVLDDDGQPFP----DSSF-----------VKVSEGVAIKMYNDMV 46
R ++++ R V ++ +PFP DS F ++V++G + +Y MV
Sbjct: 27 RVTTDATTSRANPAHVPEEHDKPFPVKLDDSVFEGYKIDVPSTEIEVTKGELLGLYEKMV 86
Query: 47 TLQTMDTIFYEAQRQGRISFYLTTS-GEEAINIASAAAIKNDDFVVPQYREPGVLLWRGF 105
T++ ++ + +I + S G+EA+ AI DD ++ YR G RG
Sbjct: 87 TIRRLELACDALYKAKKIRGFCHLSIGQEAVAAGIEGAITLDDSIITSYRCHGFAYTRGL 146
Query: 106 SMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKD 165
S++ + G + KG+ +H + N++ + + Q+P G +A K K
Sbjct: 147 SIRSIIGELMGRQCGASKGKGGSMHIFAK--NFYGGNGIVGAQIPLGAGIGFAQKYLEKP 204
Query: 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGR 225
+GDG +++G A N + + PVIF C NN + + T S + S R
Sbjct: 205 TTTFALYGDGASNQGQAFEAFNMAKLWGLPVIFACENNKYGMGT--SAERSSAMTEFYKR 262
Query: 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVD 285
+ + V+G D LA+ A A++ + +P+L+E +TYR G H+ SD T YR +
Sbjct: 263 GQYIPGLLVNGMDVLAVLQASKFAKKYTVENSQPLLMEFVTYRYGGHSMSDPGTTYRSRE 322
Query: 286 EIEWWRTTQDPVTRFRKWIESNGWWNG----DIESELRSSVRKQV 326
E++ R +DP+ +K I G N +IE +R V ++V
Sbjct: 323 EVQKVRAARDPIEGLKKHIMEWGVANANELKNIEKRIRGMVDEEV 367
>sp|O31404|ACOA_BACSU Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
OS=Bacillus subtilis (strain 168) GN=acoA PE=2 SV=2
Length = 333
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 135/299 (45%), Gaps = 4/299 (1%)
Query: 31 VKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDF 89
+ ++E A+ MY M+ ++ + +E QG + F +GEEA+ + A + + D
Sbjct: 9 LSLTEEKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLHDGDS 68
Query: 90 VVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQL 149
+ +R G + +G + + FG KG+ +H + +
Sbjct: 69 ITSTHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 128
Query: 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST 209
A G+A K + +V +FGDG ++G FH LN +AV PV+F+ NNG+ +T
Sbjct: 129 TLACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNGYGEAT 188
Query: 210 PISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 269
P D + AY + + VDG D LA+Y A A E A G P LIE +TYR
Sbjct: 189 PFEYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIECMTYRN 248
Query: 270 GHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWI--ESNGWWNGDIESELRSSVRKQV 326
H D T Y+ DE +D + F+ ++ E++ DIE + S+ K V
Sbjct: 249 YGHFEGDAQT-YKTKDERVEHLEEKDAIQGFKNYLLKETDANKLSDIEQRVSESIEKAV 306
>sp|P52902|ODPA_PEA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 397
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 137/305 (44%), Gaps = 10/305 (3%)
Query: 26 PDSSFVKVSEGVAIKMYNDMVTLQTM----DTIFYEAQRQGRISFYLTTSGEEAINIASA 81
P S V S + + M ++ M D+++ +G Y G+EA+ +
Sbjct: 55 PPSRSVTTSPSELLSFFRTMALMRRMEIAADSLYKANLIRGFCHLY---DGQEAVAVGME 111
Query: 82 AAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTV 141
A D ++ YR+ L RG ++ + G + KG+ +H+ ++
Sbjct: 112 AGTTKKDCIITAYRDHCTFLGRGGTLLRVYAELMGRRDGCSKGKGGSMHFYKKDSGFYGG 171
Query: 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR 201
+ Q+P G A+ K + ++ +GDG ++G ALN SA+ + P I +C
Sbjct: 172 HGIVGAQVPLGCGLAFGQKYLKDESVTFALYGDGAANQGQLFEALNISALWDLPAILVCE 231
Query: 202 NNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPIL 261
NN + + T +S +G V ++VDG DALA+ A A+E A+ G PI+
Sbjct: 232 NNHYGMGTATWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKNG-PII 288
Query: 262 IEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSS 321
+E TYR H+ SD + YR DEI R +DP+ R RK + S+ +
Sbjct: 289 LEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHDIATEKELKDTEKE 348
Query: 322 VRKQV 326
VRK+V
Sbjct: 349 VRKEV 353
>sp|P52899|ODPA_CAEEL Probable pyruvate dehydrogenase E1 component subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=2
SV=1
Length = 397
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 29/333 (8%)
Query: 5 SESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDT----IFYEAQR 60
+E S PC D+G P++S V ++ A+K Y DM ++ M++ ++ E +
Sbjct: 26 TEVSFHTKPCKLHKLDNG---PNTS-VTLNREDALKYYRDMQVIRRMESAAGNLYKEKKI 81
Query: 61 QGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKAD 120
+G Y SG+EA + AA+ D V+ YR G G ++ E + G A
Sbjct: 82 RGFCHLY---SGQEACAVGMKAAMTEGDAVITAYRCHGWTWLLGATVTEVLAELTGRVAG 138
Query: 121 --YGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTS 178
+GKG M ++ N++ + + Q P G A A+K + VT +GDG +
Sbjct: 139 NVHGKGGSMHMY----TKNFYGGNGIVGAQQPLGAGVALAMKYREQKNVCVTLYGDGAAN 194
Query: 179 EGDFHAALNFSAVTEAPVIFICRNNGWAIST-----PISDQFRSDGAVVKGRAYGVRSIR 233
+G A N + + + PV+F+C NNG+ + T S ++ + G V G I
Sbjct: 195 QGQLFEATNMAKLWDLPVLFVCENNGFGMGTTAERSSASTEYYTRGDYVPG-------IW 247
Query: 234 VDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTT 293
VDG D LA+ A A+E P+++E TYR H+ SD T YR +EI+ R T
Sbjct: 248 VDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSYRTREEIQEVRKT 307
Query: 294 QDPVTRFRKWIESNGWWNGDIESELRSSVRKQV 326
+DP+T F+ I ++ + + VRK+V
Sbjct: 308 RDPITGFKDRIITSSLATEEELKAIDKEVRKEV 340
>sp|P51267|ODPA_PORPU Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
purpurea GN=pdhA PE=3 SV=1
Length = 344
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 144/308 (46%), Gaps = 10/308 (3%)
Query: 24 PFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAA 82
P + + + +++ + +Y DM+ + + + + +G++ F +G+EA++
Sbjct: 10 PLTNCNQINLTKHKLLVLYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVSTGVIK 69
Query: 83 AIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVS 142
+ + D+V YR+ L +G Q + FG + +GR +H S HN+
Sbjct: 70 LLDSKDYVCSTYRDHVHALSKGVPSQNVMAELFGKETGCSRGRGGSMHIFSAPHNFLGGF 129
Query: 143 STIATQLPHAVGAAY-------ALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAP 195
+ IA +P A GAA+ LK + +FGDG T+ G F LN + + + P
Sbjct: 130 AFIAEGIPVATGAAFQSIYRQQVLKEPGELRVTACFFGDGTTNNGQFFECLNMAVLWKLP 189
Query: 196 VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIG 255
+IF+ NN WAI K A+G+ I VDG D LA+ A E A
Sbjct: 190 IIFVVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQVAEKAVERARQ 249
Query: 256 EGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIE 315
P LIEALTYR H+ +D + R E E W +DP+ + +K I N + D
Sbjct: 250 GQGPTLIEALTYRFRGHSLADPD-ELRSRQEKEAW-VARDPIKKLKKHILDNQIASSDEL 307
Query: 316 SELRSSVR 323
++++SSV+
Sbjct: 308 NDIQSSVK 315
>sp|O13366|ODPA_KLULA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PDA1 PE=3
SV=2
Length = 412
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 30/314 (9%)
Query: 26 PDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAI 84
P+ S+ + ++ ++MY DM+ ++ M+ + +I F ++ G+EAI + AI
Sbjct: 62 PELSY-QTTKSNLLQMYKDMIIVRRMEMACDALYKAKKIRGFCHSSVGQEAIAVGIENAI 120
Query: 85 KNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNK--ADYGKGRQM----PIHYGSNKHNY 138
D V+ YR G RG ++Q + G + +GKG M P YG N
Sbjct: 121 TKRDTVITSYRCHGFTYMRGAAVQAVLAELMGRRTGVSFGKGGSMHLYAPGFYGGN---- 176
Query: 139 FTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIF 198
+ Q+P G A+A + +DAC+ +GDG +++G + N + + P +F
Sbjct: 177 ----GIVGAQVPLGAGLAFAHQYKHEDACSFALYGDGASNQGQVFESFNMAKLWNLPAVF 232
Query: 199 ICRNNGWAI------STPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREM 252
C NN + + S+ +++ F+ R + ++V+G D LA+Y A A++
Sbjct: 233 CCENNKYGMGTAAARSSAMTEYFK--------RGQYIPGLKVNGMDILAVYQASKFAKDW 284
Query: 253 AIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNG 312
+ PI++E TYR G H+ SD T YR DEI+ R+ DP+ + + G
Sbjct: 285 TVSGNGPIVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLLELGIATE 344
Query: 313 DIESELRSSVRKQV 326
D + RK V
Sbjct: 345 DEIKAYDKAARKYV 358
>sp|P52900|ODPA_SMIMA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
(Fragment) OS=Sminthopsis macroura GN=PDHA PE=2 SV=1
Length = 363
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 142/303 (46%), Gaps = 9/303 (2%)
Query: 26 PDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAI 84
P ++ + EG +K Y M T++ M+ + +Q I F G+EA + A I
Sbjct: 24 PTTAVLTREEG--LKYYKIMQTVRRMELKADQLYKQKIIRGFCHLYDGQEACCMGLEAGI 81
Query: 85 KNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSST 144
D V+ YR G RG ++E + G + KG+ +H + N++ +
Sbjct: 82 NPTDHVITAYRAHGFTYTRGLPVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGI 139
Query: 145 IATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG 204
+ Q+P VG A A K + KD +T +GDG ++G A N +A+ + P IFIC NN
Sbjct: 140 VGAQVPLGVGIALACKYNEKDEICLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNR 199
Query: 205 WAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVH-AAREMAIGEGRPILIE 263
+ + T + S +G + I VDG D L + A AA G+G P+L+E
Sbjct: 200 YGMGTSVERAAASTDYYKRGDF--IPGIMVDGMDVLCVREATKFAAAYCRSGKG-PMLME 256
Query: 264 ALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVR 323
TYR H+ SD YR +EI+ R+ DP+ + + +N + + E+ VR
Sbjct: 257 LQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNNNLASIEELKEIDVEVR 316
Query: 324 KQV 326
K++
Sbjct: 317 KEI 319
>sp|Q1XDM0|ODPA_PORYE Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
yezoensis GN=pdhA PE=3 SV=1
Length = 346
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 145/308 (47%), Gaps = 10/308 (3%)
Query: 27 DSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIK 85
+S+ + +++ + +Y DM+ + + + + +G++ F +G+EA++ +
Sbjct: 15 NSTGLNLNKSNLLVLYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVSTGVIKLLN 74
Query: 86 NDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTI 145
D+V YR+ L +G + + FG + KGR +H S HN+ + I
Sbjct: 75 PTDYVCSTYRDHVHALSKGVPSKNVMAELFGKETGCSKGRGGSMHIFSAPHNFLGGFAFI 134
Query: 146 ATQLPHAVGAAY-------ALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIF 198
A +P A GAA+ LK +FGDG T+ G F LN + + + P+IF
Sbjct: 135 AEGIPVATGAAFQSIYRQQVLKETEDLRVTACFFGDGTTNNGQFFECLNMAVLWKLPIIF 194
Query: 199 ICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGR 258
+ NN WAI K A+G+ I VDG D LA+ A A + A
Sbjct: 195 VVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQAAKQAVQRARQGDG 254
Query: 259 PILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESEL 318
P LIEALTYR H+ +D + R E E W +DP+ + +K+I N N +E+
Sbjct: 255 PTLIEALTYRFRGHSLADPD-ELRSRQEKEAW-VARDPIKKLKKYILDNEIANIGELNEI 312
Query: 319 RSSVRKQV 326
+++V+ ++
Sbjct: 313 QNAVKTEL 320
>sp|Q654V6|ODPA2_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os06g0246500 PE=2
SV=1
Length = 398
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 123/255 (48%), Gaps = 3/255 (1%)
Query: 72 GEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHY 131
G+EA+ + AA D ++ YR+ L RG + + G + +G+ +H
Sbjct: 103 GQEAVAVGMEAATTRADAIITAYRDHCAYLARGGDLAALFAELMGRRGGCSRGKGGSMHL 162
Query: 132 GSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAV 191
N++ + Q+P G A+A + ++ A +GDG ++G ALN +A+
Sbjct: 163 YKKDANFYGGHGIVGAQVPLGCGLAFAQRYRKEAAVTFDLYGDGAANQGQLFEALNMAAL 222
Query: 192 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAARE 251
+ PV+ +C NN + + T ++ S R V ++VDG D LA+ A A++
Sbjct: 223 WKLPVVLVCENNHYGMGT--AEWRASKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKQ 280
Query: 252 MAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWN 311
A+ G PI++E TYR H+ SD + YR DEI R +DP+ R RK + ++ +
Sbjct: 281 HALENG-PIILEMDTYRYHGHSMSDPGSTYRTRDEIAGIRQERDPIERVRKLLLAHDFAT 339
Query: 312 GDIESELRSSVRKQV 326
++ +RKQV
Sbjct: 340 TQELKDMEKEIRKQV 354
>sp|A7MB35|ODPA_BOVIN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Bos taurus GN=PDHA1 PE=2 SV=1
Length = 390
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 137/291 (47%), Gaps = 7/291 (2%)
Query: 38 AIKMYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYRE 96
+K Y M T++ M+ + +Q I F G+EA + A I D ++ YR
Sbjct: 61 GLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRA 120
Query: 97 PGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAA 156
G RG S++E + G + KG+ +H + N++ + + Q+P G A
Sbjct: 121 HGFTFTRGLSVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIA 178
Query: 157 YALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFR 216
A K + KD +T +GDG ++G A N +A+ + P IFIC NN + + T +
Sbjct: 179 LACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAA 238
Query: 217 SDGAVVKGRAYGVRSIRVDGNDALAIYSAVH-AAREMAIGEGRPILIEALTYRVGHHTTS 275
S +G + +RVDG D L + A AA G+G PIL+E TYR H+ S
Sbjct: 239 STDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKG-PILMELQTYRYHGHSMS 295
Query: 276 DDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQV 326
D YR +EI+ R+ DP+ + + ++ + + E+ VRK++
Sbjct: 296 DPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEI 346
>sp|Q9R9N5|ODPA_RHIME Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium
meliloti (strain 1021) GN=pdhA PE=3 SV=1
Length = 348
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 145/302 (48%), Gaps = 2/302 (0%)
Query: 23 QPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRIS-FYLTTSGEEAINIASA 81
+ F + + S+ +K Y +M+ ++ + + G I F G+EA+ +
Sbjct: 21 KDFAGGTIAEFSKEDDLKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQ 80
Query: 82 AAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTV 141
A+K D V+ YR+ G +L G S + + G + KG+ +H S + +++
Sbjct: 81 LALKEGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGG 140
Query: 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR 201
+ Q+ G A+A + D ++ YFGDG ++G + + N +A+ + PVI+I
Sbjct: 141 HGIVGAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYESFNMAALWKLPVIYIVE 200
Query: 202 NNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPIL 261
NN +A+ T +S +G ++G+ +VDG D A+ +A A E PI+
Sbjct: 201 NNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVEHCRSGKGPII 260
Query: 262 IEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSS 321
+E LTYR H+ SD + KYR DE++ R+ DP+ + + + GW D ++
Sbjct: 261 LEMLTYRYRGHSMSDPA-KYRSKDEVQKMRSEHDPIEQVKARLTDKGWATEDELKQIDKE 319
Query: 322 VR 323
VR
Sbjct: 320 VR 321
>sp|P29803|ODPAT_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Homo sapiens GN=PDHA2 PE=1 SV=1
Length = 388
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 147/315 (46%), Gaps = 11/315 (3%)
Query: 14 CYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSG 72
C L ++G P ++ + +EG +K Y M+T++ M+ + +Q I F G
Sbjct: 39 CDLYLLEEGPPV--TTVLTRAEG--LKYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDG 94
Query: 73 EEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYG 132
+EA + A I D V+ YR GV RG S++ + G + KG+ +H
Sbjct: 95 QEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVRSILAELTGRRGGCAKGKGGSMHMY 154
Query: 133 SNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVT 192
+ N++ + + Q P G A A K D +T +GDG ++G A N +A+
Sbjct: 155 TK--NFYGGNGIVGAQGPLGAGIALACKYKGNDEICLTLYGDGAANQGQIAEAFNMAALW 212
Query: 193 EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVH-AARE 251
+ P +FIC NN + + T S +G + ++VDG D L + A AA
Sbjct: 213 KLPCVFICENNLYGMGTSTERAAASPDYYKRGNF--IPGLKVDGMDVLCVREATKFAANY 270
Query: 252 MAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWN 311
G+G PIL+E TYR H+ SD YR +EI+ R+ +DP+ + + ++
Sbjct: 271 CRSGKG-PILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKRDPIIILQDRMVNSKLAT 329
Query: 312 GDIESELRSSVRKQV 326
+ E+ + VRK++
Sbjct: 330 VEELKEIGAEVRKEI 344
>sp|O66112|ODPA_ZYMMO Pyruvate dehydrogenase E1 component subunit alpha OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhA PE=3 SV=1
Length = 354
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 3/256 (1%)
Query: 72 GEEAINIASAAAIK-NDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIH 130
G+EA+ + AA++ D V+ YRE G +L G + + G + G+ +H
Sbjct: 74 GQEAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAELTGRASGISHGKGGSMH 133
Query: 131 YGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSA 190
S +H +F + + Q+P G A+A K C+ YFGDG ++G + A N +A
Sbjct: 134 MFSTEHKFFGGNGIVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSANQGQVYEAYNMAA 193
Query: 191 VTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 250
+ + PVIF+ NNG+A+ T I +G +G+ ++ VDG D L + A A
Sbjct: 194 LWKLPVIFVIENNGYAMGTSIQRANAHTALSERGAGFGIPALVVDGMDVLEVRGAATVAV 253
Query: 251 EMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWW 310
+ PI++E TYR H+ SD + +YR +E+ + DP+ +K + + G
Sbjct: 254 DWVQAGKGPIILEMKTYRYRGHSMSDPA-RYRSREEVNDMKENHDPLDNLKKDLFAAGVP 312
Query: 311 NGDIESELRSSVRKQV 326
++ +L +R+QV
Sbjct: 313 EAEL-VKLDEDIRQQV 327
>sp|Q54C70|ODPA_DICDI Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=pdhA PE=1 SV=1
Length = 377
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 136/289 (47%), Gaps = 5/289 (1%)
Query: 39 IKMYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREP 97
I + +M + ++T+ ++ I F +G+EA+ +AI DD ++ YR+
Sbjct: 53 ISFFTEMSRFRRLETVCDGLYKKKLIRGFCHLYTGQEAVCAGLESAITKDDHIITAYRDH 112
Query: 98 GVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAY 157
+L RG + +E + + KG+ +H + N++ + + Q P G A+
Sbjct: 113 TYMLSRGATPEEIFAELLMKETGCSKGKGGSMHMFTK--NFYGGNGIVGAQCPLGAGIAF 170
Query: 158 ALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS 217
A K ++ + +GDG ++G A N +++ + PVIFIC NN + + T S + +
Sbjct: 171 AQKYNKTGNVCLAMYGDGAANQGQLFEAFNMASLWKLPVIFICENNKYGMGT--SQKRST 228
Query: 218 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDD 277
G R + V ++VDG D A+ A A E PI++E TYR H+ SD
Sbjct: 229 AGHDFYTRGHYVAGLKVDGMDVFAVKEAGKYAAEWCRAGNGPIILEMDTYRYVGHSMSDP 288
Query: 278 STKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQV 326
YR +E+ R T+DP+ R+ I N D + + +VR ++
Sbjct: 289 GITYRTREEVNHVRQTRDPIENIRQIILDNKIATEDQLAAIEETVRDEM 337
>sp|P35486|ODPA_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1
Length = 390
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 7/291 (2%)
Query: 38 AIKMYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYRE 96
+K Y M T++ M+ + +Q I F G+EA + A I D ++ YR
Sbjct: 61 GLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRA 120
Query: 97 PGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAA 156
G RG ++ + G + KG+ +H + N++ + + Q+P G A
Sbjct: 121 HGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIA 178
Query: 157 YALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFR 216
A K + KD +T +GDG ++G A N +A+ + P IFIC NN + + T +
Sbjct: 179 LACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAA 238
Query: 217 SDGAVVKGRAYGVRSIRVDGNDALAIYSAVH-AAREMAIGEGRPILIEALTYRVGHHTTS 275
S +G + +RVDG D L + A AA G+G PIL+E TYR H+ S
Sbjct: 239 STDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKG-PILMELQTYRYHGHSMS 295
Query: 276 DDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQV 326
D YR +EI+ R+ DP+ + + ++ + + E+ VRK++
Sbjct: 296 DPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEI 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,996,114
Number of Sequences: 539616
Number of extensions: 5281202
Number of successful extensions: 13337
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 13007
Number of HSP's gapped (non-prelim): 359
length of query: 343
length of database: 191,569,459
effective HSP length: 118
effective length of query: 225
effective length of database: 127,894,771
effective search space: 28776323475
effective search space used: 28776323475
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)