Query 019322
Match_columns 343
No_of_seqs 256 out of 2435
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 14:18:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019322.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019322hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bfd_A 2-oxoisovalerate dehydr 100.0 3E-75 1E-79 572.3 36.3 335 1-335 20-354 (400)
2 1qs0_A 2-oxoisovalerate dehydr 100.0 6.4E-74 2.2E-78 563.2 34.1 325 11-337 50-375 (407)
3 1w85_A Pyruvate dehydrogenase 100.0 9.4E-72 3.2E-76 542.1 36.2 318 10-337 18-336 (368)
4 2ozl_A PDHE1-A type I, pyruvat 100.0 9.5E-71 3.3E-75 534.0 33.4 318 13-337 14-332 (365)
5 1umd_A E1-alpha, 2-OXO acid de 100.0 3.9E-69 1.3E-73 524.4 37.5 326 10-337 11-337 (367)
6 2yic_A 2-oxoglutarate decarbox 100.0 1.7E-58 5.8E-63 488.5 22.8 321 11-336 89-451 (868)
7 2xt6_A 2-oxoglutarate decarbox 100.0 2.1E-57 7.1E-62 490.6 23.6 321 11-336 334-696 (1113)
8 2jgd_A 2-oxoglutarate dehydrog 100.0 6.1E-57 2.1E-61 479.0 22.1 323 10-336 168-523 (933)
9 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 1.1E-32 3.8E-37 284.6 16.5 230 26-275 16-291 (621)
10 1gpu_A Transketolase; transfer 100.0 2.5E-31 8.5E-36 276.7 18.0 223 65-298 29-282 (680)
11 3rim_A Transketolase, TK; TPP, 100.0 9.3E-30 3.2E-34 264.2 22.0 195 87-291 76-296 (700)
12 2e6k_A Transketolase; structur 100.0 5.2E-30 1.8E-34 265.7 19.1 221 65-298 29-282 (651)
13 1r9j_A Transketolase; domains, 100.0 9.6E-29 3.3E-33 256.9 27.4 195 88-292 60-277 (673)
14 3mos_A Transketolase, TK; thia 100.0 5.7E-29 1.9E-33 256.2 25.0 234 31-279 3-253 (616)
15 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 1.8E-30 6.2E-35 268.4 13.0 225 27-273 19-294 (629)
16 2r8o_A Transketolase 1, TK 1; 100.0 4.6E-29 1.6E-33 259.3 22.7 217 66-292 26-275 (669)
17 1itz_A Transketolase; calvin c 100.0 1.4E-28 4.8E-33 255.8 22.4 246 31-292 9-289 (675)
18 3l84_A Transketolase; TKT, str 100.0 1.3E-28 4.6E-33 253.5 21.5 214 66-290 28-268 (632)
19 3kom_A Transketolase; rossmann 100.0 8E-28 2.7E-32 249.1 22.1 195 87-291 59-276 (663)
20 3uk1_A Transketolase; structur 100.0 1E-27 3.4E-32 249.5 20.7 194 87-291 98-314 (711)
21 3m49_A Transketolase; alpha-be 100.0 2.4E-27 8.2E-32 246.1 22.7 213 69-291 55-300 (690)
22 2qtc_A Pyruvate dehydrogenase 99.9 6.2E-27 2.1E-31 248.2 22.6 220 66-292 106-422 (886)
23 4feg_A Pyruvate oxidase; carba 99.9 9E-25 3.1E-29 224.8 12.5 163 142-315 419-597 (603)
24 3ahc_A Phosphoketolase, xylulo 99.8 5.5E-19 1.9E-23 184.9 17.0 195 65-270 83-322 (845)
25 1v5e_A Pyruvate oxidase; oxido 99.7 2.4E-17 8.3E-22 169.1 12.0 121 141-270 411-541 (590)
26 2pan_A Glyoxylate carboligase; 99.7 2.6E-17 8.9E-22 169.6 9.3 122 141-270 440-582 (616)
27 2uz1_A Benzaldehyde lyase; thi 99.7 5.1E-17 1.7E-21 165.7 9.1 117 142-268 418-546 (563)
28 1q6z_A BFD, BFDC, benzoylforma 99.7 5.4E-17 1.8E-21 164.2 8.5 114 143-268 401-525 (528)
29 1ozh_A ALS, acetolactate synth 99.7 7.7E-17 2.6E-21 164.5 8.7 117 141-269 418-544 (566)
30 2iht_A Carboxyethylarginine sy 99.7 8.8E-17 3E-21 164.3 8.5 116 141-268 434-561 (573)
31 2vk8_A Pyruvate decarboxylase 99.7 3.5E-17 1.2E-21 166.9 5.4 121 141-268 411-542 (563)
32 3eya_A Pyruvate dehydrogenase 99.7 2.4E-16 8.3E-21 160.3 11.2 118 141-270 404-531 (549)
33 2pgn_A Cyclohexane-1,2-dione h 99.6 9.2E-17 3.2E-21 164.7 7.3 117 142-270 423-549 (589)
34 1t9b_A Acetolactate synthase, 99.6 2.1E-16 7E-21 164.6 9.9 117 142-270 512-639 (677)
35 1ybh_A Acetolactate synthase, 99.6 4.2E-16 1.5E-20 159.8 11.1 118 141-270 424-560 (590)
36 2vbi_A Pyruvate decarboxylase; 99.6 3E-16 1E-20 160.1 9.5 117 141-268 407-533 (566)
37 2vbf_A Branched-chain alpha-ke 99.6 3.7E-16 1.2E-20 159.6 9.8 117 141-268 423-551 (570)
38 2nxw_A Phenyl-3-pyruvate decar 99.6 2.6E-16 8.9E-21 160.6 8.1 115 142-268 421-542 (565)
39 2c31_A Oxalyl-COA decarboxylas 99.6 7.5E-16 2.6E-20 157.2 11.4 116 141-269 424-548 (568)
40 1ovm_A Indole-3-pyruvate decar 99.6 3.1E-16 1.1E-20 159.4 8.0 116 141-268 406-532 (552)
41 2q28_A Oxalyl-COA decarboxylas 99.6 1.6E-15 5.6E-20 154.5 12.2 117 141-270 419-546 (564)
42 2wvg_A PDC, pyruvate decarboxy 99.6 1.3E-15 4.4E-20 155.4 10.4 117 141-268 411-541 (568)
43 2x7j_A 2-succinyl-5-enolpyruvy 99.6 1.2E-15 4.2E-20 156.8 4.4 114 142-268 454-580 (604)
44 3hww_A 2-succinyl-5-enolpyruvy 99.5 4.7E-15 1.6E-19 151.0 7.4 113 142-268 416-539 (556)
45 3lq1_A 2-succinyl-5-enolpyruvy 99.5 1E-14 3.5E-19 149.2 6.7 111 145-269 438-561 (578)
46 2c42_A Pyruvate-ferredoxin oxi 99.2 8.4E-11 2.9E-15 129.0 13.4 165 165-336 953-1165(1231)
47 1ybh_A Acetolactate synthase, 94.3 0.15 5.1E-06 51.6 9.6 108 149-266 63-171 (590)
48 2iht_A Carboxyethylarginine sy 94.2 0.16 5.5E-06 51.2 9.6 109 149-266 61-170 (573)
49 1ozh_A ALS, acetolactate synth 94.2 0.16 5.6E-06 51.1 9.5 107 150-266 62-169 (566)
50 2pgn_A Cyclohexane-1,2-dione h 94.2 0.27 9.2E-06 49.7 11.1 107 150-266 57-164 (589)
51 2uz1_A Benzaldehyde lyase; thi 94.1 0.2 6.8E-06 50.3 10.0 108 149-266 54-163 (563)
52 1yd7_A 2-keto acid:ferredoxin 94.0 0.078 2.7E-06 51.2 6.5 110 147-267 75-188 (395)
53 2vbi_A Pyruvate decarboxylase; 93.5 0.27 9.3E-06 49.4 9.7 109 149-266 54-168 (566)
54 2wvg_A PDC, pyruvate decarboxy 93.5 0.32 1.1E-05 48.9 10.2 109 149-266 54-168 (568)
55 1t9b_A Acetolactate synthase, 93.3 0.29 1E-05 50.5 9.8 107 149-265 133-240 (677)
56 3eya_A Pyruvate dehydrogenase 93.3 0.28 9.4E-06 49.2 9.3 106 150-265 55-160 (549)
57 2o1s_A 1-deoxy-D-xylulose-5-ph 93.2 0.28 9.6E-06 50.1 9.4 104 147-264 372-476 (621)
58 2nxw_A Phenyl-3-pyruvate decar 93.1 0.26 9E-06 49.5 8.8 108 150-265 73-184 (565)
59 2q28_A Oxalyl-COA decarboxylas 93.0 0.23 7.7E-06 49.9 8.1 108 150-265 59-167 (564)
60 1v5e_A Pyruvate oxidase; oxido 92.9 0.26 8.8E-06 49.9 8.5 104 149-262 56-160 (590)
61 2r8o_A Transketolase 1, TK 1; 92.8 0.54 1.9E-05 48.4 10.9 101 149-263 415-517 (669)
62 2e6k_A Transketolase; structur 92.8 0.48 1.7E-05 48.6 10.4 103 148-264 409-513 (651)
63 4feg_A Pyruvate oxidase; carba 92.7 0.28 9.5E-06 49.8 8.5 106 150-265 64-169 (603)
64 3kom_A Transketolase; rossmann 92.7 0.62 2.1E-05 48.0 11.1 102 148-263 415-518 (663)
65 2c31_A Oxalyl-COA decarboxylas 92.6 0.24 8.2E-06 49.8 7.7 108 150-265 61-169 (568)
66 3mos_A Transketolase, TK; thia 92.3 0.62 2.1E-05 47.5 10.5 101 149-264 368-470 (616)
67 1gpu_A Transketolase; transfer 92.0 0.57 2E-05 48.4 9.9 101 149-263 422-525 (680)
68 3l84_A Transketolase; TKT, str 91.8 0.98 3.4E-05 46.2 11.2 102 148-264 394-497 (632)
69 2o1x_A 1-deoxy-D-xylulose-5-ph 91.6 0.38 1.3E-05 49.2 7.9 102 148-264 376-478 (629)
70 2ozl_B PDHE1-B, pyruvate dehyd 91.5 0.54 1.9E-05 44.3 8.4 99 147-264 73-183 (341)
71 3m49_A Transketolase; alpha-be 91.3 0.98 3.3E-05 46.7 10.6 102 148-263 439-542 (690)
72 2pan_A Glyoxylate carboligase; 91.2 0.73 2.5E-05 46.7 9.5 109 149-266 78-187 (616)
73 1itz_A Transketolase; calvin c 90.8 0.93 3.2E-05 46.7 9.9 102 149-264 427-531 (675)
74 2x7j_A 2-succinyl-5-enolpyruvy 90.8 0.43 1.5E-05 48.3 7.4 107 150-266 83-197 (604)
75 1q6z_A BFD, BFDC, benzoylforma 89.4 0.54 1.9E-05 46.7 6.6 109 149-266 51-160 (528)
76 3lq1_A 2-succinyl-5-enolpyruvy 89.1 0.78 2.7E-05 46.2 7.6 108 151-266 64-177 (578)
77 1qs0_B 2-oxoisovalerate dehydr 89.0 1.3 4.5E-05 41.4 8.7 101 147-264 63-173 (338)
78 2vbf_A Branched-chain alpha-ke 88.8 1.2 4E-05 44.8 8.6 108 149-266 76-189 (570)
79 1r9j_A Transketolase; domains, 88.6 1.8 6E-05 44.7 9.9 101 149-263 415-517 (673)
80 2vk8_A Pyruvate decarboxylase 88.6 0.78 2.7E-05 45.9 7.1 109 149-266 55-169 (563)
81 1ik6_A Pyruvate dehydrogenase; 88.3 1.8 6.3E-05 41.1 9.2 99 147-263 109-218 (369)
82 3uk1_A Transketolase; structur 88.1 2.9 9.9E-05 43.3 11.1 100 149-263 461-562 (711)
83 3rim_A Transketolase, TK; TPP, 87.8 2.5 8.5E-05 43.8 10.4 101 149-263 445-549 (700)
84 1ovm_A Indole-3-pyruvate decar 85.8 1.4 4.8E-05 43.9 7.1 108 149-266 56-169 (552)
85 1umd_B E1-beta, 2-OXO acid deh 85.0 6.1 0.00021 36.6 10.7 99 147-263 62-171 (324)
86 1w85_B Pyruvate dehydrogenase 84.3 3.7 0.00013 38.1 8.9 99 147-263 61-170 (324)
87 2bfd_B 2-oxoisovalerate dehydr 82.3 4.4 0.00015 37.9 8.5 99 147-263 78-188 (342)
88 2c42_A Pyruvate-ferredoxin oxi 82.0 6.2 0.00021 43.5 10.6 113 148-273 66-178 (1231)
89 3hww_A 2-succinyl-5-enolpyruvy 80.1 3.2 0.00011 41.5 7.1 107 150-266 60-170 (556)
90 3ibs_A Conserved hypothetical 79.6 12 0.0004 31.7 9.8 88 148-235 93-196 (218)
91 2yic_A 2-oxoglutarate decarbox 73.3 9.2 0.00031 40.5 8.5 107 147-262 595-707 (868)
92 2xt6_A 2-oxoglutarate decarbox 72.6 9.6 0.00033 41.5 8.7 109 146-263 839-953 (1113)
93 2jgd_A 2-oxoglutarate dehydrog 70.9 8.1 0.00028 41.3 7.5 103 146-262 662-775 (933)
94 4hhu_A OR280; engineered prote 58.6 13 0.00044 29.4 4.6 35 226-260 81-115 (170)
95 2zzd_B Thiocyanate hydrolase s 56.3 16 0.00055 30.4 5.1 35 287-327 109-143 (157)
96 4hhu_A OR280; engineered prote 55.3 17 0.0006 28.7 4.9 33 228-260 2-34 (170)
97 2kl8_A OR15; structural genomi 48.3 24 0.00083 24.7 4.2 29 232-260 5-33 (85)
98 4ds3_A Phosphoribosylglycinami 43.9 64 0.0022 27.9 7.3 82 165-267 8-95 (209)
99 1pyo_A Caspase-2; apoptosis, c 43.3 64 0.0022 26.8 7.0 71 196-266 35-109 (167)
100 3t5g_A GTP-binding protein RHE 42.7 84 0.0029 24.8 7.6 61 192-256 110-170 (181)
101 3c5c_A RAS-like protein 12; GD 40.5 1E+02 0.0036 24.8 8.0 59 192-254 126-185 (187)
102 3hbm_A UDP-sugar hydrolase; PS 39.2 1E+02 0.0036 27.6 8.3 34 169-203 3-38 (282)
103 3kcq_A Phosphoribosylglycinami 37.6 50 0.0017 28.7 5.6 81 164-267 8-91 (215)
104 3tqr_A Phosphoribosylglycinami 37.2 92 0.0031 26.9 7.3 81 166-267 7-92 (215)
105 3o1l_A Formyltetrahydrofolate 36.7 1.1E+02 0.0039 27.8 8.1 81 164-267 105-190 (302)
106 3av3_A Phosphoribosylglycinami 36.6 95 0.0033 26.6 7.3 82 166-267 5-91 (212)
107 2w84_A Peroxisomal membrane pr 35.1 50 0.0017 23.5 4.1 27 294-321 32-58 (70)
108 3da8_A Probable 5'-phosphoribo 35.0 1.4E+02 0.0048 25.7 8.1 81 166-268 14-99 (215)
109 3oes_A GTPase rhebl1; small GT 35.0 1.8E+02 0.0061 23.5 8.8 58 193-254 129-186 (201)
110 2h54_A Caspase-1; allosteric s 34.0 82 0.0028 26.4 6.2 70 195-265 44-115 (178)
111 3p9x_A Phosphoribosylglycinami 33.5 1.2E+02 0.004 26.2 7.3 81 166-267 4-90 (211)
112 1kao_A RAP2A; GTP-binding prot 33.1 1.6E+02 0.0055 22.4 8.0 58 192-253 107-164 (167)
113 1use_A VAsp, vasodilator-stimu 32.7 77 0.0026 20.5 4.4 8 284-291 6-13 (45)
114 1meo_A Phosophoribosylglycinam 32.3 2.3E+02 0.0077 24.2 9.0 81 166-267 2-88 (209)
115 3ff5_A PEX14P, peroxisomal bio 32.2 59 0.002 21.9 4.0 25 294-319 27-51 (54)
116 1n3y_A Integrin alpha-X; alpha 31.6 65 0.0022 26.3 5.2 99 146-252 85-192 (198)
117 2ywr_A Phosphoribosylglycinami 30.8 1.9E+02 0.0065 24.7 8.3 82 166-267 3-89 (216)
118 3ygs_P Procaspase 9; apoptosis 30.4 40 0.0014 25.2 3.3 39 300-338 26-68 (97)
119 2p1h_A APAF-1, apoptotic prote 30.2 59 0.002 23.8 4.2 25 297-321 24-48 (94)
120 4a3s_A 6-phosphofructokinase; 29.7 58 0.002 30.0 4.9 36 166-207 95-133 (319)
121 1pfk_A Phosphofructokinase; tr 29.4 61 0.0021 30.0 5.0 36 166-207 96-134 (320)
122 2f9i_B Acetyl-coenzyme A carbo 29.4 56 0.0019 29.7 4.7 41 165-205 120-168 (285)
123 3con_A GTPase NRAS; structural 28.7 1.2E+02 0.0042 24.1 6.5 54 192-250 125-181 (190)
124 1zxx_A 6-phosphofructokinase; 28.3 66 0.0023 29.7 5.0 35 166-206 95-132 (319)
125 2xf7_A GP23.1; viral protein; 28.2 65 0.0022 20.8 3.4 32 287-319 11-42 (51)
126 1qtn_A Caspase-8; apoptosis, d 27.5 1.5E+02 0.005 24.4 6.6 48 218-266 58-105 (164)
127 3q85_A GTP-binding protein REM 27.1 1.3E+02 0.0044 23.2 6.1 54 193-250 109-162 (169)
128 3lou_A Formyltetrahydrofolate 26.9 1.1E+02 0.0036 27.8 6.1 81 164-267 95-180 (292)
129 3tkl_A RAS-related protein RAB 26.0 1.4E+02 0.0049 23.7 6.4 54 193-250 121-177 (196)
130 1taf_B TFIID TBP associated fa 25.9 1.8E+02 0.006 20.5 5.9 40 296-335 8-49 (70)
131 2bln_A Protein YFBG; transfera 25.8 66 0.0023 29.3 4.5 82 169-267 3-84 (305)
132 3ghf_A Septum site-determining 25.7 96 0.0033 24.1 4.9 44 223-266 11-56 (120)
133 3od5_A Caspase-6; caspase doma 25.5 1.5E+02 0.0053 26.5 6.9 70 195-265 22-95 (278)
134 3auf_A Glycinamide ribonucleot 24.9 2.6E+02 0.009 24.1 8.2 82 166-267 24-110 (229)
135 2dko_A Caspase-3; low barrier 24.9 1.3E+02 0.0046 24.1 5.8 70 196-266 18-91 (146)
136 1x0u_A Hypothetical methylmalo 24.2 64 0.0022 32.0 4.3 14 193-206 163-176 (522)
137 1m72_A Caspase-1; caspase, cys 24.1 1E+02 0.0036 27.5 5.5 33 218-250 59-91 (272)
138 1on3_A Methylmalonyl-COA carbo 24.1 73 0.0025 31.6 4.7 13 194-206 168-180 (523)
139 2q5c_A NTRC family transcripti 23.9 1.7E+02 0.0058 24.6 6.5 83 168-255 96-186 (196)
140 2j32_A Caspase-3; Pro-caspase3 23.8 1.3E+02 0.0044 26.4 6.0 56 196-251 18-77 (250)
141 3n0v_A Formyltetrahydrofolate 23.8 1.5E+02 0.0052 26.7 6.6 81 164-267 90-175 (286)
142 3qyh_A CO-type nitrIle hydrata 23.7 55 0.0019 28.5 3.3 28 298-325 41-68 (226)
143 2e62_A Protein AT5G25060; CWF2 23.5 1.4E+02 0.0049 20.6 4.7 33 297-329 25-57 (61)
144 1ugp_A NitrIle hydratase alpha 23.2 67 0.0023 27.5 3.6 28 298-325 21-48 (203)
145 3hyn_A Putative signal transdu 22.8 82 0.0028 26.8 4.1 37 165-202 80-118 (189)
146 3hht_B NitrIle hydratase beta 22.8 86 0.003 27.6 4.4 30 287-322 73-102 (229)
147 2pju_A Propionate catabolism o 22.7 1.3E+02 0.0045 26.1 5.7 82 168-255 108-197 (225)
148 3tbh_A O-acetyl serine sulfhyd 22.5 3.3E+02 0.011 24.6 8.8 42 184-237 85-127 (334)
149 1nw9_B Caspase 9, apoptosis-re 22.4 1.8E+02 0.0063 25.8 6.8 70 196-266 23-96 (277)
150 2x5n_A SPRPN10, 26S proteasome 22.3 80 0.0027 26.5 4.1 32 168-199 110-141 (192)
151 1abz_A Alpha-T-alpha, ATA; de 22.2 60 0.0021 19.6 2.3 26 302-327 13-38 (40)
152 2zzd_C Thiocyanate hydrolase s 22.0 95 0.0033 27.3 4.4 27 298-324 32-58 (243)
153 2pqm_A Cysteine synthase; OASS 22.0 3.9E+02 0.013 24.2 9.2 16 188-203 96-111 (343)
154 1pvv_A Otcase, ornithine carba 22.0 2.1E+02 0.0073 26.2 7.2 192 30-240 13-218 (315)
155 4aec_A Cysteine synthase, mito 21.7 3.1E+02 0.011 26.2 8.6 37 188-236 193-229 (430)
156 3p45_A Caspase-6; protease, hu 21.6 2E+02 0.0067 24.2 6.3 71 195-266 45-119 (179)
157 2a9k_A RAS-related protein RAL 21.4 1.7E+02 0.0059 22.8 5.9 54 192-249 122-178 (187)
158 3cf4_G Acetyl-COA decarboxylas 21.3 59 0.002 26.7 3.0 33 166-198 35-67 (170)
159 2nzj_A GTP-binding protein REM 21.0 2.6E+02 0.0087 21.5 6.9 55 193-251 111-168 (175)
160 1snn_A DHBP synthase, 3,4-dihy 21.0 1E+02 0.0036 27.0 4.6 68 161-235 142-214 (227)
161 4ehd_A Caspase-3; caspase, apo 21.0 1.6E+02 0.0053 26.5 6.0 56 196-251 46-105 (277)
162 3sir_A Caspase; hydrolase; 2.6 20.9 1.5E+02 0.0052 26.2 5.8 55 196-250 22-79 (259)
163 2ce2_X GTPase HRAS; signaling 20.5 2.4E+02 0.0083 21.1 6.5 55 193-252 108-162 (166)
164 1ugp_B NitrIle hydratase beta 20.4 1.1E+02 0.0036 26.9 4.5 31 287-323 69-99 (226)
165 2nn3_C Caspase-1; cysteine pro 20.1 1.4E+02 0.0047 27.4 5.5 32 219-250 88-119 (310)
No 1
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=100.00 E-value=3e-75 Score=572.34 Aligned_cols=335 Identities=48% Similarity=0.880 Sum_probs=301.3
Q ss_pred CccccCCCCCCCCeeEeeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHH
Q 019322 1 MRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIAS 80 (343)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~m~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~v~~ 80 (343)
|+|+.++....+|++||+|+||+++++...+.+++++++++|+.|+++|.||+++.+++++|+++|++++.||||+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~e~~~~~y~~M~~~r~fe~~~~~~~~~gri~~~~~~~GqEa~~vg~ 99 (400)
T 2bfd_A 20 LEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGS 99 (400)
T ss_dssp CCCCCCCCSSCSCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCCCCTTCHHHHHHH
T ss_pred eeeccCcccCCCCeeEEECCCCCCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeecCCChHHHHHHH
Confidence 67888887788999999999999988766678999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEccCcchHHHHHcCCCHHHHHHHhhcCCCCCCCCCCcccccCCCCCCcccccccccCchHHHHHHHHhcc
Q 019322 81 AAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 160 (343)
Q Consensus 81 ~~~l~~~D~v~~~yR~~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k 160 (343)
+.+|+++|+++++||+|++++.+|++++++|.+++++.+++++|+++++|+..++.++++++|+||+++|+|+|+|+|.+
T Consensus 100 ~~al~~~D~v~~~yR~~~~~~~~G~~~~~~l~e~~g~~~g~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~AvG~AlA~~ 179 (400)
T 2bfd_A 100 AAALDNTDLVFGQAREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAK 179 (400)
T ss_dssp HHTSCTTSEEECCSCCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEecCcCHHHHHHcCCCHHHHHHHhcCCCCCCCCCCCCCcCCcccccCccccCccccccccHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999988778888889999999999999999999
Q ss_pred cccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCCCHH
Q 019322 161 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDAL 240 (343)
Q Consensus 161 ~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~ 240 (343)
+.+++++|||++|||++++|.+||+||+|++|+||+||||+||+|+++++.....+..++++++++|||++++|||+|++
T Consensus 180 ~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~ 259 (400)
T 2bfd_A 180 RANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVF 259 (400)
T ss_dssp HHTCCCCEEEEEETTGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSSSTTGGGTGGGTCEEEEEETTCHH
T ss_pred hhCCCCeEEEEECchhhhcChHHHHHHHHHHHCcCEEEEEECCceeeeecccccCCCCCHHHHHHHcCCcEEEEeCCCHH
Confidence 99999999999999999999999999999999999999999999999998888777789999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCCCCCCCCCHHHHHHHHhCCCcHHHHHHHHHHcCCCCHHHHHHHHH
Q 019322 241 AIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRS 320 (343)
Q Consensus 241 ~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~~Yr~~~e~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~ 320 (343)
+|+.++++|++++|++++|+|||++|||.+|||++|++..||+++|++.|+++.|||.+++++|++.|+|++++++++++
T Consensus 260 av~~a~~~A~~~ar~~~~P~lIe~~tyR~~gHs~~D~~~~Yr~~~e~~~~~~~~dPl~~~~~~L~~~g~~~~~~~~~i~~ 339 (400)
T 2bfd_A 260 AVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRK 339 (400)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC-------------------CCHHHHHHHHHTTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEEeeeeCCCCCCCCCccCCCHHHHHHHHhcCCHHHHHHHHHHHCCCCChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999854589999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 019322 321 SVRKQVILVSLTISK 335 (343)
Q Consensus 321 ~~~~~v~~a~~~a~~ 335 (343)
+++++|++++++|++
T Consensus 340 ~~~~~v~~a~~~a~~ 354 (400)
T 2bfd_A 340 QSRRKVMEAFEQAER 354 (400)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 2
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=100.00 E-value=6.4e-74 Score=563.21 Aligned_cols=325 Identities=36% Similarity=0.540 Sum_probs=310.9
Q ss_pred CCCeeEeeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcCCCCcEE
Q 019322 11 RIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFV 90 (343)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~m~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~v~~~~~l~~~D~v 90 (343)
.+|.+||+|++|+++++. .+.+|+++++++|+.|+++|.||+++..+++||+++|++++.||||++++++.+|+++|++
T Consensus 50 ~~~~~~~ld~~g~~~~~~-~~~~~~e~~~~~y~~M~~~R~fe~~~~~~~~qgr~~~~~~~~GqEA~~vg~~~al~~~D~v 128 (407)
T 1qs0_A 50 SYSLVRVLDEQGDAQGPW-AEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMC 128 (407)
T ss_dssp HTSCBCCBCTTSCBCSGG-GSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCCCCTTTHHHHHHHHHHSCTTSEE
T ss_pred CCCeEEEECCCCCCCCcC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCcCCCChHHHHHHHHHhcCCCCEE
Confidence 358899999999988764 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCcchHHHHHcCCCHHHHHHHhhcCCCCCCCCCCcccccCCCCCCcccccccccCchHHHHHHHHhcccccCCCeEEE
Q 019322 91 VPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVT 170 (343)
Q Consensus 91 ~~~yR~~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~ 170 (343)
+++||+|++.+.+|+++.++|++++|+.+++++|+++++|+.....++++.+|+||+++|+|+|+|+|.|+.+++++|||
T Consensus 129 ~~~yR~~~~~l~~g~~~~~i~~el~g~~~~~~~G~g~~~h~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~vv~ 208 (407)
T 1qs0_A 129 FPTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASA 208 (407)
T ss_dssp ECCSSCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred EecccchHHHHhcCCCHHHHHHHHhCCCCCCCCCCCceeecchhccCccccccccccchhHHHHHHHHHHHhCCCCEEEE
Confidence 99999999999999999999999999999999999999999887778999999999999999999999999999999999
Q ss_pred EeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcccccccccc-CCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHH
Q 019322 171 YFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQF-RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAA 249 (343)
Q Consensus 171 ~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~-~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a 249 (343)
++|||++++|.+||+||+|++|+||+||||+||+|+++++..... ...+++++|++|||++++|||+|+++|+.++++|
T Consensus 209 i~GDGa~~~G~~~Eal~~A~~~~lpvi~Vv~NN~~gi~~~~~~~~~~~~d~a~~a~a~G~~~~~VdG~D~~av~~a~~~A 288 (407)
T 1qs0_A 209 WIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWA 288 (407)
T ss_dssp EEETGGGGSHHHHHHHHHHHHHTCCEEEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHH
T ss_pred EECCchhhcChHHHHHHHHHHHCcCEEEEEECCCcceeeccccccCCCCCHHHHHHHcCCeEEEEcCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999877655 5678999999999999999999999999999999
Q ss_pred HHHhhccCCcEEEEEEEecCCCCCCCCCCCCCCCHHHHHHHHhCCCcHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q 019322 250 REMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQVILV 329 (343)
Q Consensus 250 ~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~~Yr~~~e~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a 329 (343)
++++|++++|+|||++|||..|||++|||..||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|+++
T Consensus 289 ~~~ar~~~gP~lIe~~t~R~~Ghs~~Dd~~~Yr~~~e~~~~~-~~DPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a 367 (407)
T 1qs0_A 289 AERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFP-LGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAA 367 (407)
T ss_dssp HHHHHTTSCCEEEEEECCCCSCSSTTCCGGGTSCTTHHHHCT-TCCHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEEEeeccCCcCCCCCccccCCHHHHHHHh-cCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 5999999999999999999999999999999999999
Q ss_pred HHHHhhcC
Q 019322 330 SLTISKYG 337 (343)
Q Consensus 330 ~~~a~~~~ 337 (343)
+++|++.+
T Consensus 368 ~~~a~~~~ 375 (407)
T 1qs0_A 368 QKEAEQYG 375 (407)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhcc
Confidence 99999863
No 3
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=100.00 E-value=9.4e-72 Score=542.12 Aligned_cols=318 Identities=36% Similarity=0.608 Sum_probs=294.4
Q ss_pred CCCCeeEeeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcCCCCcE
Q 019322 10 ERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDF 89 (343)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~m~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~v~~~~~l~~~D~ 89 (343)
..+|++||+|+||++.++...+.+|+++++++|+.|+++|.||+++.+++++|+++|+|++.|||+++++++.+|+++|+
T Consensus 18 ~~~~~~~~l~~~g~~~~~~~~~~l~~e~l~~~y~~M~~~R~fe~~~~~~~~qgr~g~~~~~~G~Ea~~vg~~~~l~~~D~ 97 (368)
T 1w85_A 18 EQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDF 97 (368)
T ss_dssp HTCCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCCTTCHHHHHHHHHTCCTTCE
T ss_pred CCCCeeEEECCCCCCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCCHHHHHHHHHHhcCCcCE
Confidence 46789999999999887655678999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCcchHHHHHcCCCHHHHHHHhhcCCCCCCCCCCcccccCCCCCCcccccccccCchHHHHHHHHhcccccCCCeEE
Q 019322 90 VVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAV 169 (343)
Q Consensus 90 v~~~yR~~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv 169 (343)
++++||+|++++.+|.++..+|++++|+.+ |+ ++| .+.++.+++|+||+++|+|+|+|+|.++.+++++||
T Consensus 98 v~~~~R~~~~~~~~G~~~~~~~~el~G~~~----G~--~~h---~~~~~~~~~g~lG~~lp~AvG~A~A~~~~~~~~~vv 168 (368)
T 1w85_A 98 ILPGYRDVPQIIWHGLPLYQAFLFSRGHFH----GN--QIP---EGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAI 168 (368)
T ss_dssp EECCSSCHHHHHHTTCCHHHHHHHHHTCGG----GG--CCC---TTCCBCCCCCSTTHHHHHHHHHHHHHHHTTCSCCEE
T ss_pred EEecchhHHHHHhcCCCHHHHHHHHCCCCC----CC--CCC---cccccCCCccccCccccHHHHHHHHhHhhCCCCeEE
Confidence 999999999999999999999999999754 33 345 346788889999999999999999999999999999
Q ss_pred EEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHH
Q 019322 170 TYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAA 249 (343)
Q Consensus 170 ~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a 249 (343)
|++|||++++|.++|+||+|++|+||+||||+||+|+++++.....+.++++++|++|||++++|||+|+++|+.++++|
T Consensus 169 ~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A 248 (368)
T 1w85_A 169 TYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAA 248 (368)
T ss_dssp EEEETGGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHHHHHHH
T ss_pred EEEchhhhhhcHHHHHHHHHHHHCcCEEEEEEcCCccceeccccccCCCCHHHHHHHCCCCEEEEcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998877777789999999999999999999999999999999
Q ss_pred HHHhhccCCcEEEEEEEecCCCCC-CCCCCCCCCCHHHHHHHHhCCCcHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q 019322 250 REMAIGEGRPILIEALTYRVGHHT-TSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQVIL 328 (343)
Q Consensus 250 ~~~~r~~~gP~lIe~~t~R~~gHs-~~dd~~~Yr~~~e~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 328 (343)
++++|++++|+|||++|||.+||| ++|||..||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|++
T Consensus 249 ~~~~r~~~gP~lIe~~t~r~~gHs~~~Ddp~~yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 327 (368)
T 1w85_A 249 RERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWA-KKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKE 327 (368)
T ss_dssp HHHHHTTSCCEEEEEECCCSSCSCSSCC------CHHHHHHHH-TTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEEEeeccCCCCCCCCCccccCCHHHHHHHh-cCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999998 599999999999999999999999999999999999
Q ss_pred HHHHHhhcC
Q 019322 329 VSLTISKYG 337 (343)
Q Consensus 329 a~~~a~~~~ 337 (343)
+++.|++.-
T Consensus 328 a~~~a~~~p 336 (368)
T 1w85_A 328 AIKKADETP 336 (368)
T ss_dssp HHHHHHTSC
T ss_pred HHHHHHhCC
Confidence 999998753
No 4
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=100.00 E-value=9.5e-71 Score=534.01 Aligned_cols=318 Identities=26% Similarity=0.375 Sum_probs=293.6
Q ss_pred CeeEeeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccccchhhHHHHHHHhcCCCCcEEE
Q 019322 13 PCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVV 91 (343)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~m~~~R~~e~~~~~~~~~g~i-~~~~~~~G~Ea~~v~~~~~l~~~D~v~ 91 (343)
..+++..-+. .+...+.+|+++++++|+.|+++|.||+++..++++|++ +|+|++.|||++++|+..+|++.|+++
T Consensus 14 ~~~~~~~~~~---~~~~~~~l~~e~l~~~yr~M~~~R~~e~~~~~l~~~g~i~gf~~~~~GqEa~~vg~~~al~~~D~i~ 90 (365)
T 2ozl_A 14 KKCDLHRLEE---GPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 90 (365)
T ss_dssp CCCEEESCSC---CSCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSCTTSEEE
T ss_pred CccccccCCC---CccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHhhCCCCEEe
Confidence 3455554331 133456799999999999999999999999999999999 799999999999999999999999999
Q ss_pred ccCcchHHHHHcCCCHHHHHHHhhcCCCCCCCCCCcccccCCCCCCcccccccccCchHHHHHHHHhcccccCCCeEEEE
Q 019322 92 PQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTY 171 (343)
Q Consensus 92 ~~yR~~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~ 171 (343)
++||+|++++++|+++.++|++++|+.+|+++|+++++|+.. .++++.+|+||+++|+|+|+|+|.++.+++++|||+
T Consensus 91 ~~yR~~~~~~~~G~~~~~i~~e~~g~~~g~~~g~gg~~H~~~--~~~~~~~g~~G~~lp~A~G~A~A~~~~~~~~~vv~~ 168 (365)
T 2ozl_A 91 TAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYA--KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTL 168 (365)
T ss_dssp CCSCCHHHHHHTTCCHHHHHHHHTTCTTSTTTTSSCTTCCCB--TTBCCCCCSTTTHHHHHHHHHHHHHHHTCCCCEEEE
T ss_pred hHHHHHHHHHhcCCCHHHHHHHHcCCCCCCCCCCCCCCCcCc--cccCCCcchhhhhhHHHHHHHHHHHhcCCCceEEEE
Confidence 999999999999999999999999999999999888899854 478888899999999999999999999999999999
Q ss_pred eCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHH
Q 019322 172 FGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAARE 251 (343)
Q Consensus 172 ~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~ 251 (343)
+|||++++|.+||+||+|++|+||+||||+||+|+++++.......+++++ ++||+++++|||+|+++|++++++|++
T Consensus 169 ~GDGa~~~G~~~Ealn~A~~~~lpvi~vv~NN~~g~~t~~~~~~~~~~~~~--ra~g~p~~~VdG~D~~av~~a~~~A~~ 246 (365)
T 2ozl_A 169 YGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYK--RGDFIPGLRVDGMDILCVREATRFAAA 246 (365)
T ss_dssp EETTGGGCHHHHHHHHHHHHTTCCEEEEEEECSEETTEEHHHHCSCCCGGG--TTTTSCEEEEETTCHHHHHHHHHHHHH
T ss_pred ECchhhhccHHHHHHHHHHHHCcCEEEEEECCCcccCCCcccccCCCCHHH--HhCCCCEEEEeCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998766656667776 579999999999999999999999999
Q ss_pred HhhccCCcEEEEEEEecCCCCCCCCCCCCCCCHHHHHHHHhCCCcHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Q 019322 252 MAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQVILVSL 331 (343)
Q Consensus 252 ~~r~~~gP~lIe~~t~R~~gHs~~dd~~~Yr~~~e~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~ 331 (343)
++|++++|+|||++|||.+|||++|++..||+++|++.|++++|||.+|+++|+++|+||++++++|+++++++|+++++
T Consensus 247 ~~r~~~gP~lIe~~t~R~~gHs~~D~~~~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~ 326 (365)
T 2ozl_A 247 YCRSGKGPILMELQTYRYHGHEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQ 326 (365)
T ss_dssp HHHTTCCCEEEEEECCCSSCSSTTCCSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCEEEEEEeecCCCCCCCCCCcccCCHHHHHHHHhCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998788999999999985589999999999999999999999999999999999999
Q ss_pred HHhhcC
Q 019322 332 TISKYG 337 (343)
Q Consensus 332 ~a~~~~ 337 (343)
.|++.-
T Consensus 327 ~a~~~p 332 (365)
T 2ozl_A 327 FATADP 332 (365)
T ss_dssp HHHHSC
T ss_pred HHHhCC
Confidence 998753
No 5
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=100.00 E-value=3.9e-69 Score=524.40 Aligned_cols=326 Identities=38% Similarity=0.614 Sum_probs=311.4
Q ss_pred CCCCeeEeeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcCCCC-c
Q 019322 10 ERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKND-D 88 (343)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~m~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~v~~~~~l~~~-D 88 (343)
..+|++||+|+||++.++ ..+.+|+++++++|+.|+++|.||.++..++++|++++++++.|+|++++++..+++++ |
T Consensus 11 ~~~~~~~~l~~~g~~~~~-~~~~l~~~~l~~l~~~m~~~R~~~~~~~~~~~~G~~g~~~~~~G~ea~~~~~~~~l~~~rD 89 (367)
T 1umd_A 11 FTEEPIRLIGEEGEWLGD-FPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFD 89 (367)
T ss_dssp SCSSCBCCBCTTSCBCCS-SCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCCCCCTTCHHHHHHHHHHSCTTTS
T ss_pred CCCCeEEEECCCCCCCCc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcCHHHHHHHHHHHcCCCCc
Confidence 567899999999998877 45789999999999999999999999999999999999999999999999999999998 9
Q ss_pred EEEccCcchHHHHHcCCCHHHHHHHhhcCCCCCCCCCCcccccCCCCCCcccccccccCchHHHHHHHHhcccccCCCeE
Q 019322 89 FVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACA 168 (343)
Q Consensus 89 ~v~~~yR~~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~v 168 (343)
+++++||+|++++.+|+++.++|.+++++.++++.|+++++|+..+..++.+++|++|+++|+|+|+|+|.|+.+++++|
T Consensus 90 ~i~~s~r~~~~~~~~G~~~~~~l~~~~g~~~g~~~G~~~~~h~~~~~~~~~~~~g~lG~~l~~a~G~A~a~k~~~~~~~v 169 (367)
T 1umd_A 90 WVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVA 169 (367)
T ss_dssp EEECCTTTHHHHHHHTCCHHHHHHHHHTBTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHTTCCCCE
T ss_pred EEEeCcHHHHHHHHcCCCHHHHHHHHhCCCCCCCCCCCCCCCCcccccCcCCCCchhhhhhhHHHHHHHHHHHhCCCCeE
Confidence 99999999999999999999999999999999999999999998777788889999999999999999999999999999
Q ss_pred EEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHH
Q 019322 169 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHA 248 (343)
Q Consensus 169 v~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~ 248 (343)
||++|||++++|.++|+|++|+.|++|+|+||+||+|+++++.....+..++.+++++|||++++|||+|+.+|++++++
T Consensus 170 v~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~av~~a~~~ 249 (367)
T 1umd_A 170 VCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKE 249 (367)
T ss_dssp EEEEETGGGGSHHHHHHHHHHHHTTCSEEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHHHHHH
T ss_pred EEEEcccccccCcHHHHHHHHHHhCcCEEEEEecCCeeeccChhhccCCCCHHHHHHHcCCcEEEeCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999877767778999999999999999999999999999999
Q ss_pred HHHHhhccCCcEEEEEEEecCCCCCCCCCCCCCCCHHHHHHHHhCCCcHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q 019322 249 AREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQVIL 328 (343)
Q Consensus 249 a~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~~Yr~~~e~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 328 (343)
|+++++++++|+|||++|||..|||++|||..||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|++
T Consensus 250 A~~~a~~~~gP~lIe~~t~r~~Ghs~~D~~~~Yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 328 (367)
T 1umd_A 250 AVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELER 328 (367)
T ss_dssp HHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHH-TTCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEEeecCCCCCCCCCccccCCHHHHHHHH-cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 599999999999999999999999999999999999
Q ss_pred HHHHHhhcC
Q 019322 329 VSLTISKYG 337 (343)
Q Consensus 329 a~~~a~~~~ 337 (343)
++++|++.-
T Consensus 329 a~~~a~~~~ 337 (367)
T 1umd_A 329 GLKEAEEAG 337 (367)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhCC
Confidence 999998753
No 6
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=1.7e-58 Score=488.47 Aligned_cols=321 Identities=16% Similarity=0.145 Sum_probs=275.1
Q ss_pred CCCeeEeeCCCCC-CCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcC-
Q 019322 11 RIPCYRVLDDDGQ-PFPD----SSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAI- 84 (343)
Q Consensus 11 ~~~~~~~~~~~~~-~~~~----~~~~~~s~~~~~~~~~~m~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~v~~~~~l- 84 (343)
.++..+|.|++++ +++. .. +.+|+++++++|+.|+++|.||+++..++++|+. | +..|||++++++..+|
T Consensus 89 g~e~~~i~~~~~~~w~~~~~e~~~-~~~s~e~~~~~y~~m~~~R~fE~~l~~~~~~~k~-~--g~~G~Ea~~~g~~~~l~ 164 (868)
T 2yic_A 89 GVEYTHILEPEQQRWIQERVETKH-DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKR-F--SLEGAETVIPMMDAVID 164 (868)
T ss_dssp EEECTTCSCHHHHHHHHHHHSSCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGG-G--CCTTCTTHHHHHHHHHH
T ss_pred CcceeccCChHHhHHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-c--cCCChHHHHHHHHHHHH
Confidence 4466677777775 2221 12 6799999999999999999999999999988874 3 4599999999988764
Q ss_pred -----CCCcEEEc-cCcchHHHHH--cCCCHHHHHHHhhcCCCCC-C-CCCCcccccCCCC------------CCccccc
Q 019322 85 -----KNDDFVVP-QYREPGVLLW--RGFSMQEFANQCFGNKADY-G-KGRQMPIHYGSNK------------HNYFTVS 142 (343)
Q Consensus 85 -----~~~D~v~~-~yR~~~~~l~--~G~~~~~~~~~~~g~~~~~-~-~G~~~~~h~~~~~------------~~~~~~~ 142 (343)
+++|++++ +||+|+++|+ +|+++.++|++++|+.+++ + .|+++++|++... .++.+++
T Consensus 165 ~~~~l~~~D~v~gm~hRg~~~~Lan~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~ 244 (868)
T 2yic_A 165 QCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANP 244 (868)
T ss_dssp HHHHTTCSEEEEECCSTTHHHHHHHTTCCCHHHHTTTCC------------CGGGTCCEEEEEECSSSSCEEEEEECCCC
T ss_pred HhhhCCCCCEEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCC
Confidence 58999998 8999999999 9999999999999999877 4 4556789986422 2345678
Q ss_pred ccccCchHHHHHHHHhccccc----------CCCeEEEEeCcccc-CcchHHHHHHHHHhCCCC---EEEEEEcCCCccc
Q 019322 143 STIATQLPHAVGAAYALKMDR----------KDACAVTYFGDGGT-SEGDFHAALNFSAVTEAP---VIFICRNNGWAIS 208 (343)
Q Consensus 143 g~lG~~lp~A~G~A~a~k~~~----------~~~~vv~~~GDG~~-~eG~~~Eal~~A~~~~Lp---vi~vv~nN~~~~~ 208 (343)
|+||+++|+|+|+|+|.|+.+ .+.++||++|||+| +||.+||+||+|+.|+|| +||||+||+|+++
T Consensus 245 s~Lg~~~P~A~G~A~A~k~~~~~~~~~~~~~~~~~vv~~~GDGa~~~eG~v~Ealn~A~~~~lp~g~vi~iv~NN~~g~s 324 (868)
T 2yic_A 245 SHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFT 324 (868)
T ss_dssp SSTTTTHHHHHHHHHHHHHHHTCSTTSSSCSCCEEEEEEEEHHHHHHCHHHHHHHTTTTCTTTCCSCCEEEEEECSCBTT
T ss_pred ccccccccHHHHHHHHHHhhccCCcccccccCCceEEEEECCcccccccHHHHHHHHHHhcCCCCCCeEEEEEcCCcccc
Confidence 999999999999999999864 56799999999997 899999999999999998 9999999999999
Q ss_pred cccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCCCCCCCCCHHHHH
Q 019322 209 TPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIE 288 (343)
Q Consensus 209 ~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~~Yr~~~e~~ 288 (343)
++.....+..++.+++++|||++++|||+|+++|+.++++|++++|++++|+|||++|||.+|||++|+|. |+.++|++
T Consensus 325 t~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~ar~~~~PvlIe~~tyR~~GHs~~D~p~-~~~p~~~~ 403 (868)
T 2yic_A 325 TAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPS-MTQPYMYD 403 (868)
T ss_dssp BCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGG-GTCHHHHH
T ss_pred cCccccccccCHHHHHHhCCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeecCCCcCcccccc-cCChHHHH
Confidence 98765556677889999999999999999999999999999999999999999999999999999999986 55667777
Q ss_pred HHHhCCCcHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019322 289 WWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQVILVSLTISKY 336 (343)
Q Consensus 289 ~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~ 336 (343)
.|++++||+.+|+++|+++|++|++++++++++++++|++++++|+++
T Consensus 404 ~~~~~~dPi~~~~~~L~~~G~~t~ee~~~i~~e~~~~v~~a~~~a~~~ 451 (868)
T 2yic_A 404 VIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVREL 451 (868)
T ss_dssp HHTTCCCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 887678999999999999999999999999999999999999998874
No 7
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.1e-57 Score=490.57 Aligned_cols=321 Identities=16% Similarity=0.138 Sum_probs=273.5
Q ss_pred CCCeeEeeCCCCC-CCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhc--
Q 019322 11 RIPCYRVLDDDGQ-PFPD----SSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAA-- 83 (343)
Q Consensus 11 ~~~~~~~~~~~~~-~~~~----~~~~~~s~~~~~~~~~~m~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~v~~~~~-- 83 (343)
.++..+|.+++++ +++. .. +.+|+++++++|+.|+++|.||+++..++++|+. | +..|||++++++..+
T Consensus 334 g~e~~~i~~~~~~~w~~~~~e~~~-~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~~k~-~--g~~GqEa~~~g~~~~l~ 409 (1113)
T 2xt6_A 334 GVEYTHILEPEQQRWIQERVETKH-DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKR-F--SLEGAETVIPMMDAVID 409 (1113)
T ss_dssp EEECTTCSCHHHHHHHHHHHHSCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGG-G--CCTTCTTHHHHHHHHHH
T ss_pred CcceeccCCHHHhHHHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-c--cCCChHHHHHHHHHHHH
Confidence 4456677777775 2221 11 6799999999999999999999999999988874 2 349999999998776
Q ss_pred ----CCCCcEEEc-cCcchHHHHH--cCCCHHHHHHHhhcCCCCC-C-CCCCcccccCCCC------------CCccccc
Q 019322 84 ----IKNDDFVVP-QYREPGVLLW--RGFSMQEFANQCFGNKADY-G-KGRQMPIHYGSNK------------HNYFTVS 142 (343)
Q Consensus 84 ----l~~~D~v~~-~yR~~~~~l~--~G~~~~~~~~~~~g~~~~~-~-~G~~~~~h~~~~~------------~~~~~~~ 142 (343)
++++|++++ +||+|+++|+ +|++++++|++++|+.+++ + .|+++++|++... .++.+++
T Consensus 410 ~~~~l~~~D~v~gm~hRg~~~~La~~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~ 489 (1113)
T 2xt6_A 410 QCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANP 489 (1113)
T ss_dssp HHHHTTCSEEEEECCSTTHHHHHHHTTCCCHHHHSTTC-------------CGGGTCCEEEEEECSSSSCEEEEEECCCC
T ss_pred HhhhCCCCCEEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCC
Confidence 558999998 8999999999 9999999999999999887 4 4556789986422 2345678
Q ss_pred ccccCchHHHHHHHHhccccc----------CCCeEEEEeCcccc-CcchHHHHHHHHHhCCCC---EEEEEEcCCCccc
Q 019322 143 STIATQLPHAVGAAYALKMDR----------KDACAVTYFGDGGT-SEGDFHAALNFSAVTEAP---VIFICRNNGWAIS 208 (343)
Q Consensus 143 g~lG~~lp~A~G~A~a~k~~~----------~~~~vv~~~GDG~~-~eG~~~Eal~~A~~~~Lp---vi~vv~nN~~~~~ 208 (343)
|+||+++|+|+|+|+|.|+.+ .+.+++|++|||+| +||.+||+||+|+.|+|| +||||+||+|+++
T Consensus 490 s~Lg~~~p~A~G~A~A~k~~~~~~~~~~~~~~~~~~v~~~GDGa~~~eG~~~Ealn~A~~~~lp~g~vi~iv~NN~~gis 569 (1113)
T 2xt6_A 490 SHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFT 569 (1113)
T ss_dssp SSTTTTHHHHHHHHHHHHHHTTBSTTSSBSCCCEEEEEEEEHHHHHHCTHHHHHHTTTTCTTTCCSCCEEEEEECSCBTT
T ss_pred ccccccccHHHHHHHHHHHhccccCccccccCCcEEEEEECCcccccccHHHHHHHHHhhcCCCCCCeEEEEEeCCcccc
Confidence 999999999999999999865 56899999999996 899999999999999998 9999999999999
Q ss_pred cccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCCCCCCCCCHHHHH
Q 019322 209 TPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIE 288 (343)
Q Consensus 209 ~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~~Yr~~~e~~ 288 (343)
+++....+..++.+++++|||++++|||+|+++|+.|+++|++++|++++|+|||++|||.+|||++|+|. |+.++|++
T Consensus 570 t~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~~r~~~~PvlIe~~tyR~~GHs~~D~p~-~~~~~~~~ 648 (1113)
T 2xt6_A 570 TAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPS-MTQPYMYD 648 (1113)
T ss_dssp BCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGG-GTCHHHHH
T ss_pred cCccccccccCHHHHHHhcCCcEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeEccCCcCCCCccc-cCChHHHH
Confidence 98665555567889999999999999999999999999999999999999999999999999999999986 55566777
Q ss_pred HHHhCCCcHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019322 289 WWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQVILVSLTISKY 336 (343)
Q Consensus 289 ~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~ 336 (343)
.|++++||+.+|+++|+++|++|++++++++++++++|++++++|+++
T Consensus 649 ~~~~~~dpi~~~~~~L~~~G~~t~ee~~~i~~e~~~~v~~a~~~a~~~ 696 (1113)
T 2xt6_A 649 VIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVREL 696 (1113)
T ss_dssp HHTTCCCHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 787678999999999999999999999999999999999999999875
No 8
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=6.1e-57 Score=479.03 Aligned_cols=323 Identities=13% Similarity=0.129 Sum_probs=264.6
Q ss_pred CCCCeeEeeCCCCC-CCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcCC
Q 019322 10 ERIPCYRVLDDDGQ-PFPDS---SFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIK 85 (343)
Q Consensus 10 ~~~~~~~~~~~~~~-~~~~~---~~~~~s~~~~~~~~~~m~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~v~~~~~l~ 85 (343)
..++.++|+|++++ ++++. ..+.+|+++++++|+.|+++|.||+++..++++|+ +| ++.|||++++++..+++
T Consensus 168 ig~e~~~i~~~~~~~w~~~~~e~~~~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~gk-rf--~~~G~Ea~i~g~~~~~~ 244 (933)
T 2jgd_A 168 IGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAK-RF--SLEGGDALIPMLKEMIR 244 (933)
T ss_dssp EEEECSSCCCHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC---CC--CCTTCTTHHHHHHHHHH
T ss_pred CcceeeecCCHHHhHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cc--cCCCchHHHHHHHHHHH
Confidence 34577889999886 33221 14679999999999999999999999999999987 33 57999999999666554
Q ss_pred ------CCcEEEc-cCcchHHHHH--cCCCHHHHHHHhhcCCCCCCCCCCcccccCCCCC----------Cccccccccc
Q 019322 86 ------NDDFVVP-QYREPGVLLW--RGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKH----------NYFTVSSTIA 146 (343)
Q Consensus 86 ------~~D~v~~-~yR~~~~~l~--~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~----------~~~~~~g~lG 146 (343)
++|++++ +||+|+++|+ +|+++.++|++++|+.++.+.|+++++|++.... ++.+++|++|
T Consensus 245 ~a~~~g~~D~v~g~~hRg~~~~Lan~~G~~~~~i~~e~~G~~~g~~g~gdv~~Hlg~~~~~~~~gg~~~l~l~~~~shlg 324 (933)
T 2jgd_A 245 HAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLE 324 (933)
T ss_dssp HHHTTTCCEEEEECCSTTHHHHHHHTTCCCHHHHHHHHHTCC--CCSCCCCGGGCCEEEEEEETTEEEEEEECCCCSSTT
T ss_pred HHhhCCCCCEEecCCCcCHHHHHHHHhCCCHHHHHHHhcCCCCCCCCCCCccccCCcccccccCCCceEEeecccCcccc
Confidence 7999996 8999999999 9999999999999999888767778999875331 2346789999
Q ss_pred CchHHHHHHHHhccccc-----CCCeEEEEeCcccc-CcchHHHHHHHHHhCCCC---EEEEEEcCCCcccc-ccccccC
Q 019322 147 TQLPHAVGAAYALKMDR-----KDACAVTYFGDGGT-SEGDFHAALNFSAVTEAP---VIFICRNNGWAIST-PISDQFR 216 (343)
Q Consensus 147 ~~lp~A~G~A~a~k~~~-----~~~~vv~~~GDG~~-~eG~~~Eal~~A~~~~Lp---vi~vv~nN~~~~~~-~~~~~~~ 216 (343)
+++|+|+|+|+|.++.+ .+.++||++|||++ ++|++||+||+|+.+++| +||||+||+|++++ +...+..
T Consensus 325 ~~~p~A~G~A~A~~~~~~~~~~~~~~vv~v~GDGa~a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN~~~ist~~~~~~~~ 404 (933)
T 2jgd_A 325 IVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARS 404 (933)
T ss_dssp CHHHHHHHHHHHHHTTSSSCCGGGEEEEEEEEHHHHHHCTHHHHHHHHTTSTTTCCSCCEEEEEECC-------------
T ss_pred cccCHHHHHHHHHHhhccccCCCCeEEEEEECCcccccCCHHHHHHHHhhccCCCCCceEEEEEeCCccccCCCHHhccc
Confidence 99999999999999874 67899999999998 899999999999999999 99999999999999 8877777
Q ss_pred CccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCCCCCCCCCHHHHHHHHhCCCc
Q 019322 217 SDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDP 296 (343)
Q Consensus 217 ~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~~Yr~~~e~~~~~~~~dP 296 (343)
..++++++++||||+++|||+|+++|++++++|++++|.+++|+|||++|||..||+++|++ .||+++|++.|++.+||
T Consensus 405 ~~~~~~~a~a~g~p~~~VdG~D~~av~~a~~~A~e~~r~~~~P~lIe~~tyR~~GH~~~D~~-~yr~~~e~~~~~~~~dP 483 (933)
T 2jgd_A 405 TPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEP-SATQPLMYQKIKKHPTP 483 (933)
T ss_dssp --CGGGGGGTTTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC------------CCTTHHHHHTSCCH
T ss_pred chhHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeeeeecCcCcccch-hhCCHHHHHHHHccCCH
Confidence 77899999999999999999999999999999999999999999999999999999999986 59999999999865799
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019322 297 VTRFRKWIESNGWWNGDIESELRSSVRKQVILVSLTISKY 336 (343)
Q Consensus 297 i~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~ 336 (343)
+.+|+++|+++|++|++++++++++++++|+++++.|+++
T Consensus 484 i~~~~~~Li~~Gv~t~~~~~~i~~~~~~~v~~a~~~A~~~ 523 (933)
T 2jgd_A 484 RKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEW 523 (933)
T ss_dssp HHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHTSCCCTTE
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999998874
No 9
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.1e-32 Score=284.63 Aligned_cols=230 Identities=14% Similarity=0.151 Sum_probs=177.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcCC-CCcEEE--ccCcchHHHHH
Q 019322 26 PDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIK-NDDFVV--PQYREPGVLLW 102 (343)
Q Consensus 26 ~~~~~~~~s~~~~~~~~~~m~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~v~~~~~l~-~~D~v~--~~yR~~~~~l~ 102 (343)
.|.+.++++.+++.++++.| |.+...+.. + ..++++++.|++.+.+++..+++ +.|+++ ..||++++.+.
T Consensus 16 ~p~d~~~l~~~~l~~l~~~i---R~~~~~~~~--~--~~Gh~~~~lg~~~~~~~l~~~~~~~~D~~v~~~gH~~y~~~~l 88 (621)
T 2o1s_A 16 STQELRLLPKESLPKLCDEL---RRYLLDSVS--R--SSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKIL 88 (621)
T ss_dssp SHHHHTTSCGGGHHHHHHHH---HHHHHHHSC--G--GGCTHHHHHTTHHHHHHHHHHSCTTTSEEEESSSTTCHHHHHT
T ss_pred ChHHhhhCCHHHHHHHHHHH---HHHHHHHHh--h--cCCCcCCChhHHHHHHHHHhccCCCCCEEEEeCchHHHHHHHH
Confidence 34556789999999999998 655433321 2 23688999999999999999999 899988 68999999999
Q ss_pred cCCCHHHHHHHhhcCCCCCCCCCCcccccCCCC-CCcccccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcch
Q 019322 103 RGFSMQEFANQCFGNKADYGKGRQMPIHYGSNK-HNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD 181 (343)
Q Consensus 103 ~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~-~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~ 181 (343)
.|. .++ +..++.. | +.+.|+...+ ++.+.++|++|+++|.|+|+|+|.|+.+++++|||++|||++++|+
T Consensus 89 ~G~-~~~-~~~~r~~------~-g~~g~~~~~~s~~~~~~~G~~G~gl~~A~G~AlA~~~~~~~~~Vv~v~GDG~~~~G~ 159 (621)
T 2o1s_A 89 TGR-RDK-IGTIRQK------G-GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGM 159 (621)
T ss_dssp TTT-GGG-GGGTTST------T-SCCSSCCTTTCTTCCSCCSSSSCHHHHHHHHHHHHHHHTSCCCEEEEEETTGGGSHH
T ss_pred hCC-Hhh-hhccccc------C-CCCCCCCCCCCCCCccCCcccchHHHHHHHHHHHHHHhCCCCeEEEEEchhhhhccH
Confidence 997 222 3333321 2 2345554322 3445569999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCEEEEEEcCCCccccccccccCC----------------------------------ccH-------
Q 019322 182 FHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS----------------------------------DGA------- 220 (343)
Q Consensus 182 ~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~----------------------------------~~~------- 220 (343)
+||+||+|+++++|+|+||+||+|++++++..+... .++
T Consensus 160 ~~EaL~~A~~~~~pli~vvnnN~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~p~~~~~~~r~~~~~~~~~~p 239 (621)
T 2o1s_A 160 AFEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMVVP 239 (621)
T ss_dssp HHHHHHHHHHHCCSEEEEEEECC--------------------------------------------------------C
T ss_pred HHHHHHHHHhhCCCEEEEEeCCCcccCCCcchHHHHHHhhhcchhHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccCh
Confidence 999999999999999999999999998775432100 011
Q ss_pred HHhHhhcCceEE-EEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCC
Q 019322 221 VVKGRAYGVRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTS 275 (343)
Q Consensus 221 ~~~a~a~G~~~~-~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~ 275 (343)
..++++|||+++ +|||||+.++.+++++|++ .++|+||+++|+|..||+..
T Consensus 240 ~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~----~~gP~lI~v~t~kg~G~~~~ 291 (621)
T 2o1s_A 240 GTLFEELGFNYIGPVDGHDVLGLITTLKNMRD----LKGPQFLHIMTKKGRGYEPA 291 (621)
T ss_dssp HHHHHHTTCEEEEEEETTCHHHHHHHHHHHHH----SCSEEEEEEECCCTTCCCCC
T ss_pred hhHHHHCCCeEeeeeCCCCHHHHHHHHHHHHH----cCCCEEEEEEEecccCCChh
Confidence 478999999999 9999999999999998875 47999999999999999843
No 10
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=99.97 E-value=2.5e-31 Score=276.71 Aligned_cols=223 Identities=19% Similarity=0.157 Sum_probs=177.4
Q ss_pred ccccccchhhHHHHHHHh--cCCC-------CcEEE-c-cCcc---hHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCccc
Q 019322 65 SFYLTTSGEEAINIASAA--AIKN-------DDFVV-P-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPI 129 (343)
Q Consensus 65 ~~~~~~~G~Ea~~v~~~~--~l~~-------~D~v~-~-~yR~---~~~~l~~G~-~~~~~~~~~~g~~~~~~~G~~~~~ 129 (343)
++..++.|.--+.+++-. .+++ .|.++ + .|-+ .+++...|. .+.+-|..++. .|+.+++
T Consensus 29 GH~g~~l~~~~i~~~L~~~~~~~~~~p~~~~rDr~v~s~GH~~~~lYa~~~l~G~~~~~~~l~~~r~------~g~~~~g 102 (680)
T 1gpu_A 29 GHPGAPLGMAPAAHVLWSQMRMNPTNPDWINRDRFVLSNGHAVALLYSMLHLTGYDLSIEDLKQFRQ------LGSRTPG 102 (680)
T ss_dssp SCCHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHHHHHHHHHHTTCSCCHHHHTTTTC------TTCSCCS
T ss_pred CccCCchhHHHHHHHHHHhCCCCccCCCCCCCCEEEEecchHHHHHHHHHHHhCCCCCHHHHHhhcc------cCCCCCC
Confidence 344456666555555554 4443 47554 3 4555 355556676 33444555554 2555688
Q ss_pred ccCCCCCCcccccccccCchHHHHHHHHhccccc----------CCCeEEEEeCccccCcchHHHHHHHHHhCCCC-EEE
Q 019322 130 HYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIF 198 (343)
Q Consensus 130 h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~----------~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~ 198 (343)
|+....+++...+|++|+++|.|+|+|+|.++.+ .+++|||++|||++++|++||++++|+.++|| +|+
T Consensus 103 hp~~~~~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~vv~i~GDG~~~eG~~~Eal~~A~~~~L~~li~ 182 (680)
T 1gpu_A 103 HPEFELPGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIA 182 (680)
T ss_dssp SCCTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEE
T ss_pred CCCccCCCeeeccccccchHHHHHHHHHHHHHhccccccCccCCCCCeEEEEECCCccchhhHHHHHHHHHHhCCCcEEE
Confidence 9876567888999999999999999999998654 37899999999999999999999999999996 999
Q ss_pred EEEcCCCccccccccccCCccHHHhHhhcCceEE-EEeCC-CHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCC
Q 019322 199 ICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSI-RVDGN-DALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSD 276 (343)
Q Consensus 199 vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~-~VdG~-d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~d 276 (343)
||+||+|++++++...+ ..++.+++++|||+++ .|||| |+.++++++++|++ ..++|+||+++|+|..||+..|
T Consensus 183 i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~A~~---~~~~P~lI~~~T~kg~G~~~~~ 258 (680)
T 1gpu_A 183 IYDDNKITIDGATSISF-DEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKL---SKDKPTLIKMTTTIGYGSLHAG 258 (680)
T ss_dssp EEEECSEETTEEGGGTC-CCCHHHHHHHHTCEEEEESCTTTCHHHHHHHHHHHHH---CTTSCEEEEEECCTTTTSTTTT
T ss_pred EEECCCceEeccccccc-CccHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH---CCCCCEEEEEEeecccccccCC
Confidence 99999999998877554 5789999999999999 99999 99999999998876 2579999999999999999776
Q ss_pred CC---CCCCCHHHHHHHHhCCCcHH
Q 019322 277 DS---TKYRPVDEIEWWRTTQDPVT 298 (343)
Q Consensus 277 d~---~~Yr~~~e~~~~~~~~dPi~ 298 (343)
++ ..||+++|+++|++ .+++.
T Consensus 259 ~~~~H~~~~~~ee~~~~~~-~~~~~ 282 (680)
T 1gpu_A 259 SHSVHGAPLKADDVKQLKS-KFGFN 282 (680)
T ss_dssp SGGGSSSCCCHHHHHHHHH-HTTCC
T ss_pred CCccCCCCCCHHHHHHHHH-HcCCC
Confidence 53 57999999999984 55543
No 11
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=99.97 E-value=9.3e-30 Score=264.20 Aligned_cols=195 Identities=21% Similarity=0.166 Sum_probs=158.3
Q ss_pred CcEEE-c-cCcc---hHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCcccccCC-CCCCcccccccccCchHHHHHHHHhc
Q 019322 87 DDFVV-P-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGS-NKHNYFTVSSTIATQLPHAVGAAYAL 159 (343)
Q Consensus 87 ~D~v~-~-~yR~---~~~~l~~G~-~~~~~~~~~~g~~~~~~~G~~~~~h~~~-~~~~~~~~~g~lG~~lp~A~G~A~a~ 159 (343)
.|.++ + .|-+ .+++...|+ ...+-|..|+. .|+.++.|+.. ..+++..++|++|+++|.|+|+|+|.
T Consensus 76 rDrfvls~GH~s~~lYa~l~l~G~~~~~~~l~~fr~------~gs~~~ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~ 149 (700)
T 3rim_A 76 RDRFVLSAGHSSLTLYIQLYLGGFGLELSDIESLRT------WGSKTPGHPEFRHTPGVEITTGPLGQGLASAVGMAMAS 149 (700)
T ss_dssp CCEEEESSTTCHHHHHHHHHHTTSSCCHHHHTTTTS------TTCSCCSSCCBTTBTTCCSCCCSTTHHHHHHHHHHHHH
T ss_pred CCeEEECCCchhHHHHHHHHHhCCCCCHHHHHHhhc------CCCCCCCCCCCCCCCCccccccccCCcchHHHHHHHHH
Confidence 57555 3 5665 345556775 34444566664 36778899875 35788889999999999999999999
Q ss_pred ccc-------------cCCCeEEEEeCccccCcchHHHHHHHHHhCCCC-EEEEEEcCCCccccccccccCCccHHHhHh
Q 019322 160 KMD-------------RKDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGR 225 (343)
Q Consensus 160 k~~-------------~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~ 225 (343)
|+. +.+++|+|++|||++++|++||++++|+.++|| +|+||+||+|++++++.... ..++.++++
T Consensus 150 k~~~~~~~~~~~~~~~~~~~~v~~~~GDG~l~eG~~~EAl~~A~~~~L~nli~i~d~N~~si~~~~~~~~-~~~~~~~~~ 228 (700)
T 3rim_A 150 RYERGLFDPDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDRNQISIEDDTNIAL-CEDTAARYR 228 (700)
T ss_dssp HHHHHHHCTTSCTTCSTTCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHH
T ss_pred HHHhhhccccccccccCCCCeEEEEECCcccccChHHHHHHHHHHcCCCcEEEEEECCCcccccchhhcc-chhHHHHHH
Confidence 974 457899999999999999999999999999995 99999999999999887654 678999999
Q ss_pred hcCceEEEE-eCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCCCCC----CCCCHHHHHHHH
Q 019322 226 AYGVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST----KYRPVDEIEWWR 291 (343)
Q Consensus 226 a~G~~~~~V-dG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~----~Yr~~~e~~~~~ 291 (343)
+|||++++| ||||+.+|++|+++|.+ ..++|+||+|+|+|..||+...+.. .-.+++|++.++
T Consensus 229 a~G~~~~~V~DG~D~~al~~Al~~A~~---~~~~P~lI~~~T~kG~G~~~~e~~~~~Hg~~~~~e~~~~~~ 296 (700)
T 3rim_A 229 AYGWHVQEVEGGENVVGIEEAIANAQA---VTDRPSFIALRTVIGYPAPNLMDTGKAHGAALGDDEVAAVK 296 (700)
T ss_dssp HHTCEEEEEECTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSHHHHHSCCCHHHHHHHH
T ss_pred HcCCeEEEECCCCCHHHHHHHHHHHHH---cCCCCEEEEEEEEeeecCCccCCCccccCCCCCHHHHHHHH
Confidence 999999999 99999999999998875 2589999999999999998644321 123567776654
No 12
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=99.97 E-value=5.2e-30 Score=265.72 Aligned_cols=221 Identities=20% Similarity=0.154 Sum_probs=173.1
Q ss_pred ccccccchhhHHHHHHHh---cCC-------CCcEEE-c-cCcc---hHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCcc
Q 019322 65 SFYLTTSGEEAINIASAA---AIK-------NDDFVV-P-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMP 128 (343)
Q Consensus 65 ~~~~~~~G~Ea~~v~~~~---~l~-------~~D~v~-~-~yR~---~~~~l~~G~-~~~~~~~~~~g~~~~~~~G~~~~ 128 (343)
++..++.|.--+.+++-. .++ +.|.++ + .|-+ .+++...|. .+.+-|..++.. |+..+
T Consensus 29 GH~g~~l~~~~i~~~L~~~~~~~~p~~p~~~~rDr~vls~GH~~~~lYa~l~l~G~~~~~~~l~~~r~~------~~~~~ 102 (651)
T 2e6k_A 29 GHPGMPMGMAPLAYLLFREVMRHNPLDPDWPDRDRFVLSAGHGSMLLYAVLHLTGYDLPLEELKSFRQW------GSKTP 102 (651)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCCCCTTCTTCTTSCEEEESSGGGHHHHHHHHHHTTCSCCHHHHTTTTST------TCSCC
T ss_pred CccCcchhHHHHHHHHHHHHhcCCccCCCCCCCCeEEEeCcchhHHHHHHHHHhCCCCCHHHHHHhhcc------CCCCC
Confidence 344455665555555542 233 236544 3 4555 455556776 344445555542 44557
Q ss_pred cccCCC-CCCcccccccccCchHHHHHHHHhccccc----------CCCeEEEEeCccccCcchHHHHHHHHHhCCCC-E
Q 019322 129 IHYGSN-KHNYFTVSSTIATQLPHAVGAAYALKMDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-V 196 (343)
Q Consensus 129 ~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a~k~~~----------~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-v 196 (343)
.|+... .+++...+|++|+++|.|+|+|+|.++.+ ++++|||++|||++++|++||+|++|+.++|| +
T Consensus 103 ghp~~~~~~g~~~~~G~lG~gl~~AvG~A~A~~~~~~~~~~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~l 182 (651)
T 2e6k_A 103 GHPERGHTPGVEVTTGPLGQGISTAVGLALAERKLAAEFNRPGHVVVDHYTYVLASDGDLMEGVSGEAASLAGHWGLSKL 182 (651)
T ss_dssp SSCCBTTBTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTE
T ss_pred CCCCCCCCCCeeeccccccchHHHHHHHHHHHHhhcccccccccCCCCCEEEEEEChhhhchhHHHHHHHHHHHcCCCeE
Confidence 787643 36788899999999999999999998765 68899999999999999999999999999996 9
Q ss_pred EEEEEcCCCccccccccccCCccHHHhHhhcCceEE-EEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCC
Q 019322 197 IFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTS 275 (343)
Q Consensus 197 i~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~-~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~ 275 (343)
|+||+||+|++++++...+ ..++.+++++|||+++ .|||||+.++++++++|++ .++|+||+++|+|..||+ .
T Consensus 183 i~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~----~~~P~lI~~~t~kg~G~~-~ 256 (651)
T 2e6k_A 183 IVFWDDNRISIDGPTDLAF-TEDVLARYRAYGWQTLRVEDVNDLEALRKAIKLAKL----DERPTLIAVRSHIGFGSP-K 256 (651)
T ss_dssp EEEEEECCEETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTCHHHHHHHHHHHHH----SSSCEEEEEECCTTTTST-T
T ss_pred EEEEECCCccccccccccc-CccHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHH----CCCCEEEEEEeEeccccc-c
Confidence 9999999999999887765 6789999999999999 9999999999999998876 579999999999999999 4
Q ss_pred CCCCCC----CCHHHHHHHHhCCCcHH
Q 019322 276 DDSTKY----RPVDEIEWWRTTQDPVT 298 (343)
Q Consensus 276 dd~~~Y----r~~~e~~~~~~~~dPi~ 298 (343)
+++..| ++++|+++|+ +++|++
T Consensus 257 ~~~~~~H~~~~~~~e~~~~~-~~~~~~ 282 (651)
T 2e6k_A 257 QDSAKAHGEPLGPEAVEATR-RNLGWP 282 (651)
T ss_dssp TTSGGGTSSCCHHHHHHHHH-HHHTCC
T ss_pred cccccccccCCCHHHHHHHH-HHcCCC
Confidence 445555 5778999998 467764
No 13
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.97 E-value=9.6e-29 Score=256.86 Aligned_cols=195 Identities=21% Similarity=0.172 Sum_probs=161.7
Q ss_pred cEEE-c-cCcc---hHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCcccccCCC-CCCcccccccccCchHHHHHHHHhcc
Q 019322 88 DFVV-P-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYALK 160 (343)
Q Consensus 88 D~v~-~-~yR~---~~~~l~~G~-~~~~~~~~~~g~~~~~~~G~~~~~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a~k 160 (343)
|.++ + .|-+ .+++...|+ .+.+-+..++. .|+.+++|+... .+++..++|+||+++|.|+|+|+|.+
T Consensus 60 Drfvls~GH~~~~lYa~l~l~G~~~~~~~l~~~r~------~~s~~~ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~~ 133 (673)
T 1r9j_A 60 DRFVMSNGHGCALQYALLHMAGYNLTMDDLKGFRQ------DGSRTPGHPERFVTPGVEVTTGPLGQGIANAVGLAIAEA 133 (673)
T ss_dssp CEEEESSGGGHHHHHHHHHHHTCSCCHHHHHTTTS------TTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHH
T ss_pred CeEEEccccHHHHHHHHHHHcCCCCCHHHHHhhcc------CCCCCCCCCCCCCCCCeeeccCCCCCcHHHHHHHHHHHH
Confidence 6544 4 4555 344455686 44555666665 366778898754 46788899999999999999999998
Q ss_pred ccc----------CCCeEEEEeCccccCcchHHHHHHHHHhCCCC-EEEEEEcCCCccccccccccCCccHHHhHhhcCc
Q 019322 161 MDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (343)
Q Consensus 161 ~~~----------~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (343)
+.+ .+++|+|++|||+++||++||++++|+.++|| +|+||+||+|++++++...+ ..++.+++++|||
T Consensus 134 ~~~~~~n~~g~~~~d~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~d~N~~~i~~~~~~~~-~~d~~~~~~a~G~ 212 (673)
T 1r9j_A 134 HLAATFNRPGYNIVDHYTYVYCGDGCLMEGVCQEALSLAGHLALEKLIVIYDSNYISIDGSTSLSF-TEQCHQKYVAMGF 212 (673)
T ss_dssp HHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECSBCSSSBGGGTC-CCCHHHHHHHTTC
T ss_pred HhhhhccccccCCCCCEEEEEECcchhcccHHHHHHHHHHHhCCCcEEEEEECCCCccccchhhcc-CHhHHHHHHHCCC
Confidence 764 58899999999999999999999999999995 99999999999999888766 6889999999999
Q ss_pred eEE-EEeC-CCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCCC---CCCCCCHHHHHHHHh
Q 019322 230 RSI-RVDG-NDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDD---STKYRPVDEIEWWRT 292 (343)
Q Consensus 230 ~~~-~VdG-~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~dd---~~~Yr~~~e~~~~~~ 292 (343)
+++ .||| ||++++++|+++|.+ ..++|+||+++|+|..||+..+. ...+++++|+++|++
T Consensus 213 ~~~~~vdG~~d~~~l~~Al~~A~~---~~~~P~lI~~~T~kg~G~~~~~~~~~H~~~~~~ee~~~~~~ 277 (673)
T 1r9j_A 213 HVIEVKNGDTDYEGLRKALAEAKA---TKGKPKMIVQTTTIGFGSSKQGTEKVHGAPLGEEDIANIKA 277 (673)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTSTTTTSGGGTSSCCCHHHHHHHHH
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHH---cCCCCEEEEEecccccccccCCCcccccCCCCHHHHHHHHH
Confidence 999 9999 999999999998875 25799999999999999985443 234678899998874
No 14
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.97 E-value=5.7e-29 Score=256.24 Aligned_cols=234 Identities=20% Similarity=0.170 Sum_probs=173.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHH-hcCC---------CCcEEEc--cCcch-
Q 019322 31 VKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASA-AAIK---------NDDFVVP--QYREP- 97 (343)
Q Consensus 31 ~~~s~~~~~~~~~~m~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~v~~~-~~l~---------~~D~v~~--~yR~~- 97 (343)
.++++....+|-.....+|.+=-.+......|.+ .++.|.--+.+++- ..|+ +.|.++. .|-+.
T Consensus 3 ~~~~~~~~~~l~~~a~~iR~~~i~~~~~~~~GH~---g~~l~~~e~~~~L~~~~~~~~~~~p~~~~rDr~v~s~GH~~~~ 79 (616)
T 3mos_A 3 HKPDQQKLQALKDTANRLRISSIQATTAAGSGHP---TSCCSAAEIMAVLFFHTMRYKSQDPRNPHNDRFVLSKGHAAPI 79 (616)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSCH---HHHHTTHHHHHHHHHTTCBCCTTCTTCTTSCEEEESSGGGHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHhcCCCcC---CcchhHHHHHHHHHHHhhccCCCCCCCCCCCeEEEcCccHHHH
Confidence 3466666655555555666553333332233443 34455444444442 2332 2576553 45542
Q ss_pred --HHHHHcCCCHHHHHHHhhcCCCCCCCCCCcccccCCCCCCcccccccccCchHHHHHHHHhcccccC-CCeEEEEeCc
Q 019322 98 --GVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK-DACAVTYFGD 174 (343)
Q Consensus 98 --~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~-~~~vv~~~GD 174 (343)
+++...|+...+-|..++. .|+++++|+....+++..++|++|+++|.|+|+|+|.++.+. +++|||++||
T Consensus 80 ly~~~~l~G~~~~~~l~~~r~------~~s~l~ghp~~~~~~~d~~~G~lG~gl~~A~G~AlA~~~~~~~~~~vv~v~GD 153 (616)
T 3mos_A 80 LYAVWAEAGFLAEAELLNLRK------ISSDLDGHPVPKQAFTDVATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGD 153 (616)
T ss_dssp HHHHHHHTTSSCGGGGGGTTC------TTCSCCSSCCTTSTTCSSCCCSTTCHHHHHHHHHHHHHHTSCCSCCEEEEEET
T ss_pred HHHHHHHcCCCCHHHHHHhcc------CCCCCCCCCCCCCCcccccccccCCccHHHHHHHHHHHHhCCCCCEEEEEECc
Confidence 3555678643344555654 377888998766677777899999999999999999886554 6899999999
Q ss_pred cccCcchHHHHHHHHHhCCCC-EEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHh
Q 019322 175 GGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA 253 (343)
Q Consensus 175 G~~~eG~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~ 253 (343)
|++++|++||+|++|+.++|| +|+|++||+|++++++.......++.+++++|||++++|||||++++.++++++
T Consensus 154 G~~~eG~~~Eal~~A~~~~l~~livi~nnN~~~i~~~~~~~~~~~~~~~~~~a~G~~~~~VdG~d~~~l~~al~~~---- 229 (616)
T 3mos_A 154 GELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQA---- 229 (616)
T ss_dssp GGGGSHHHHHHHHHHHHTTCTTEEEEEEECSBCSSSBCTTTTCHHHHHHHHHHTTCEEEEEETTCHHHHHHHHHSC----
T ss_pred cccccCcHHHHHHHHHHcCCCcEEEEEECCCCCCcCCcccccChHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhc----
Confidence 999999999999999999996 888999999999988877666678999999999999999999999999988543
Q ss_pred hccCCcEEEEEEEecCCCCCCCCCCC
Q 019322 254 IGEGRPILIEALTYRVGHHTTSDDST 279 (343)
Q Consensus 254 r~~~gP~lIe~~t~R~~gHs~~dd~~ 279 (343)
.++|+||+|+|+|..||+..+++.
T Consensus 230 --~~~P~lI~v~T~kg~G~~~~e~~~ 253 (616)
T 3mos_A 230 --KHQPTAIIAKTFKGRGITGVEDKE 253 (616)
T ss_dssp --CSSCEEEEEECCTTTTSTTTTTCS
T ss_pred --CCCCEEEEEEEecccccccccCch
Confidence 479999999999999998766554
No 15
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.97 E-value=1.8e-30 Score=268.40 Aligned_cols=225 Identities=16% Similarity=0.121 Sum_probs=173.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcCC-CCcEEEccCcchH---HHHH
Q 019322 27 DSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIK-NDDFVVPQYREPG---VLLW 102 (343)
Q Consensus 27 ~~~~~~~s~~~~~~~~~~m~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~v~~~~~l~-~~D~v~~~yR~~~---~~l~ 102 (343)
+.+.+.++.+++.++++.| |.+...+. .+ ..+++++++|+-.+..++...++ ++|+++.. |||+ +.+.
T Consensus 19 p~d~~~l~~~~l~~l~~~i---R~~~~~~~---~~-~~Gh~~~~lg~v~l~~aL~~~~~~~~D~~v~~-~GH~~y~~~~l 90 (629)
T 2o1x_A 19 PKDLKRLSREQLPALTEEL---RGEIVRVC---SR-GGLHLASSLGAVDIITALHYVLDSPRDRILFD-VGHQAYAHKIL 90 (629)
T ss_dssp HHHHTTSCGGGHHHHHHHH---HHHHHHHH---TT-SSSCHHHHHHTHHHHHHHHHHSCTTTSEEEES-SSTTCHHHHHT
T ss_pred hhhhhhCCHHHHHHHHHHH---HHHHHHHH---Hh-cCCcCCCchhHHHHHHHHHhhcCCCCCeEEec-CchHHHHHHHH
Confidence 4456678999999999999 55433222 22 23688899999777777766778 89999988 9985 6666
Q ss_pred cCC-CHHHHHHHhhcCCCCCCCCCCcccccCCC-CCCcccccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcc
Q 019322 103 RGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEG 180 (343)
Q Consensus 103 ~G~-~~~~~~~~~~g~~~~~~~G~~~~~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG 180 (343)
.|. +.-..+.++.+ .+.|+... .++..+.+|++|+++|.|+|+|+|.|+++++++|||++|||++++|
T Consensus 91 ~G~~~~~~~~r~~~g----------~~G~p~~~~s~~~~~~~G~~G~gl~~AvG~AlA~k~~~~~~~Vv~v~GDG~~~~G 160 (629)
T 2o1x_A 91 TGRRDQMADIKKEGG----------ISGFTKVSESEHDAITVGHASTSLTNALGMALARDAQGKDFHVAAVIGDGSLTGG 160 (629)
T ss_dssp TTTGGGGGGTTSTTS----------CCSSCCGGGCTTCCSCCSSSSCHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSH
T ss_pred hCcHhHHhCcccCCC----------CCCCCCCCCCCCCCcCCCcccccHhHHHHHHHHHHHhCCCCeEEEEEchhhhhcc
Confidence 776 22122222222 22333221 2345667899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCEEEEEEcCCCccccccccccC--------------------------C---------cc-H----
Q 019322 181 DFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFR--------------------------S---------DG-A---- 220 (343)
Q Consensus 181 ~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~--------------------------~---------~~-~---- 220 (343)
++||+||+|+++++|+|+||+||+|++++++..+.. . .+ +
T Consensus 161 ~~~EaL~~A~~~~~pli~IvnnN~~~i~~~~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~~~~ 240 (629)
T 2o1x_A 161 MALAALNTIGDMGRKMLIVLNDNEMSISENVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKNSTRHFF 240 (629)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECSBSSSBCCSSHHHHC------------------------------------------
T ss_pred HHHHHHHHHHhhCCCEEEEEECCCCCCCCChhHHHHHHHHHhhchhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999876642100 0 03 2
Q ss_pred --H--HhHhhcCceEE-EEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCC
Q 019322 221 --V--VKGRAYGVRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 273 (343)
Q Consensus 221 --~--~~a~a~G~~~~-~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs 273 (343)
. +++++|||+++ +|||||+.++.+++++|++ .++|+||+++|++..||+
T Consensus 241 ~p~~~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~----~~~P~lI~v~t~kg~G~~ 294 (629)
T 2o1x_A 241 DPASVNPFAAMGVRYVGPVDGHNVQELVWLLERLVD----LDGPTILHIVTTKGKGLS 294 (629)
T ss_dssp ---CCCTTGGGTCEEEEEEESSCHHHHHHHHHHHTT----SSSEEEEEEECCTTTTCH
T ss_pred CcccchHHHhcCCeEEeeECCcCHHHHHHHHHHHHh----cCCCEEEEEEEecCCCCC
Confidence 3 78999999999 9999999999999988754 579999999999998886
No 16
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.96 E-value=4.6e-29 Score=259.32 Aligned_cols=217 Identities=22% Similarity=0.190 Sum_probs=170.4
Q ss_pred cccccchhhHHHHHHH-h--cCCC-------CcEE-Ec-cCcc---hHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCccc
Q 019322 66 FYLTTSGEEAINIASA-A--AIKN-------DDFV-VP-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPI 129 (343)
Q Consensus 66 ~~~~~~G~Ea~~v~~~-~--~l~~-------~D~v-~~-~yR~---~~~~l~~G~-~~~~~~~~~~g~~~~~~~G~~~~~ 129 (343)
+..++.|.--+.+++- . .+++ .|.+ ++ .|-+ .+++...|. .+.+-|..++.. |+..+.
T Consensus 26 H~g~~l~~~~i~~~L~~~~~~~~~~~p~~~~rDr~v~s~GH~~~~lYa~~~l~G~~~~~~~l~~~r~~------~~~~~g 99 (669)
T 2r8o_A 26 HPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQL------HSKTPG 99 (669)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHHHHHHHHHHHTCSCCHHHHTTTTST------TCSCCS
T ss_pred ccCCchhHHHHHHHHHHHhhcCCcCCCCCCCCCeEEEeCccHHHHHHHHHHHcCCCCCHHHHHHhhcC------CCCCCC
Confidence 4445666655555555 3 3333 4644 44 4555 344555675 334445555542 555678
Q ss_pred ccCCC-CCCcccccccccCchHHHHHHHHhccccc----------CCCeEEEEeCccccCcchHHHHHHHHHhCCCC-EE
Q 019322 130 HYGSN-KHNYFTVSSTIATQLPHAVGAAYALKMDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VI 197 (343)
Q Consensus 130 h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a~k~~~----------~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi 197 (343)
|+... .+++...+|++|+++|.|+|+|+|.++.+ .+++|||++|||++++|++||++++|+.++|| +|
T Consensus 100 hp~~~~~~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li 179 (669)
T 2r8o_A 100 HPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLI 179 (669)
T ss_dssp SCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEE
T ss_pred CCCccCCCCcccccccccchHHHHHHHHHHHHHhccccccCccCCcCCeEEEEECHhHhcchHHHHHHHHHHHcCCCcEE
Confidence 88643 46888889999999999999999988654 37899999999999999999999999999996 99
Q ss_pred EEEEcCCCccccccccccCCccHHHhHhhcCceEE-EEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCC-C
Q 019322 198 FICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTT-S 275 (343)
Q Consensus 198 ~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~-~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~-~ 275 (343)
+||+||+|++++++.... ..++.+++++|||+++ .|||||+.++++++++|++ ..++|+||+++|+|..||+. .
T Consensus 180 ~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~---~~~~P~lI~~~T~kg~G~~~~~ 255 (669)
T 2r8o_A 180 AFYDDNGISIDGHVEGWF-TDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARA---VTDKPSLLMCKTIIGFGSPNKA 255 (669)
T ss_dssp EEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTT
T ss_pred EEEECCCcEecccccccc-CccHHHHHHHCCCeEEeEECCCCHHHHHHHHHHHHh---cCCCCEEEEEEeEeccCcCCcC
Confidence 999999999998877554 5789999999999999 9999999999999998876 25799999999999999984 4
Q ss_pred CCC---CCCCCHHHHHHHHh
Q 019322 276 DDS---TKYRPVDEIEWWRT 292 (343)
Q Consensus 276 dd~---~~Yr~~~e~~~~~~ 292 (343)
+++ ..||+++|+++|++
T Consensus 256 ~~~~~H~~~~~~ee~~~~~~ 275 (669)
T 2r8o_A 256 GTHDSHGAPLGDAEIALTRE 275 (669)
T ss_dssp TSGGGTSSCCCHHHHHHHHH
T ss_pred CCCcccCCCCCHHHHHHHHH
Confidence 433 56999999999873
No 17
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.96 E-value=1.4e-28 Score=255.82 Aligned_cols=246 Identities=20% Similarity=0.139 Sum_probs=183.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHH---hcCC-------CCcEEE-c-cCcc--
Q 019322 31 VKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASA---AAIK-------NDDFVV-P-QYRE-- 96 (343)
Q Consensus 31 ~~~s~~~~~~~~~~m~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~v~~~---~~l~-------~~D~v~-~-~yR~-- 96 (343)
..++.++|.++ ...+|.+-..+......| +..++.|.--+.+++- ..++ +.|.++ + .|-+
T Consensus 9 ~~l~~~~l~~~---a~~iR~~~~~~v~~a~~G---H~g~~l~~~~i~~~L~~~~~~~~p~~p~~~~rDr~vls~GH~~~~ 82 (675)
T 1itz_A 9 KAATGELLEKS---VNTIRFLAIDAVEKANSG---HPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVLSAGHGCML 82 (675)
T ss_dssp -CCCHHHHHHH---HHHHHHHHHHHHHHHTCS---CCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHHH
T ss_pred CCCCHHHHHHH---HHHHHHHHHHHHHHcCCC---ccCccHhHHHHHHHHHHHHhcCCcCCCCCCCCCeEEEcCcchHHH
Confidence 46888888764 334455433333332334 4445566555555554 2343 236544 3 4555
Q ss_pred -hHHHHHcCC--CHHHHHHHhhcCCCCCCCCCCcccccCCC-CCCcccccccccCchHHHHHHHHhccccc---------
Q 019322 97 -PGVLLWRGF--SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYALKMDR--------- 163 (343)
Q Consensus 97 -~~~~l~~G~--~~~~~~~~~~g~~~~~~~G~~~~~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a~k~~~--------- 163 (343)
.+++...|. .+.+-|..++. .|+..+.|+... .+++..++|+||+++|.|+|+|+|.++.+
T Consensus 83 lYa~l~l~G~~~~~~~~l~~~r~------~~~~~~ghp~~~~~~~~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~ 156 (675)
T 1itz_A 83 QYALLHLAGYDSVKEEDLKQFRQ------WGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDSE 156 (675)
T ss_dssp HHHHHHHHTCTTCCHHHHTTTTS------TTCSSCSSCCTTTCTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBC
T ss_pred HHHHHHHcCCCCCCHHHHHhccc------CCCCCCCCCCCCCCCCeeECCccHHhHHHHHHHHHHHhhhhcccccccccC
Confidence 345555676 34444555554 255567888753 46788899999999999999999998765
Q ss_pred -CCCeEEEEeCccccCcchHHHHHHHHHhCCC-CEEEEEEcCCCccccccccccCCccHHHhHhhcCceEE-EEeCC-CH
Q 019322 164 -KDACAVTYFGDGGTSEGDFHAALNFSAVTEA-PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSI-RVDGN-DA 239 (343)
Q Consensus 164 -~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~L-pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~-~VdG~-d~ 239 (343)
++++|||++|||++++|++||++++|+.++| |+|+||+||+|++++++...+ ..++.+++++|||+++ .|||| |+
T Consensus 157 ~~~~~v~~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~ 235 (675)
T 1itz_A 157 IVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAF-TEDVSTRFEALGWHTIWVKNGNTGY 235 (675)
T ss_dssp CCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTTCH
T ss_pred CCCCEEEEEECHhHhchhHHHHHHHHHHHhCCCcEEEEEECCCccCCCChhhhc-ChhHHHHHHhCCCEEEEEecCCCCH
Confidence 7899999999999999999999999999999 799999999999998887655 6789999999999999 99999 99
Q ss_pred HHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCCCCC----CCCCHHHHHHHHh
Q 019322 240 LAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST----KYRPVDEIEWWRT 292 (343)
Q Consensus 240 ~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~----~Yr~~~e~~~~~~ 292 (343)
+++.+++++|++. .++|+||+++|+|..||+...++. .+.+++|++++++
T Consensus 236 ~~l~~al~~a~~~---~~~P~lI~~~T~kg~G~~~~~~~~~~H~~~~~~e~~~~~~~ 289 (675)
T 1itz_A 236 DDIRAAIKEAKAV---TDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRQ 289 (675)
T ss_dssp HHHHHHHHHHHHC---CSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHC---CCCeEEEEEeeecccCcccccCcccccCCCCCHHHHHHHHH
Confidence 9999999988752 579999999999999998644332 2467788887763
No 18
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.96 E-value=1.3e-28 Score=253.46 Aligned_cols=214 Identities=21% Similarity=0.165 Sum_probs=167.1
Q ss_pred cccccchhhHHHHHHHhcCC---------CCcEEEc--cCcc---hHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCcccc
Q 019322 66 FYLTTSGEEAINIASAAAIK---------NDDFVVP--QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIH 130 (343)
Q Consensus 66 ~~~~~~G~Ea~~v~~~~~l~---------~~D~v~~--~yR~---~~~~l~~G~-~~~~~~~~~~g~~~~~~~G~~~~~h 130 (343)
+..++.|.--+.+++...|+ +.|.++. .|-+ .+++...|. ...+-|.+++. .|+..+.|
T Consensus 28 H~g~~lg~~ei~~~L~~~~~~~p~~p~~~~rDrfvls~GH~~~~lYa~l~l~G~~~~~~~l~~~r~------~~s~~~gh 101 (632)
T 3l84_A 28 HPGAPLGLADILSVLSYHLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQ------LHSKTPGH 101 (632)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCCTTCTTCTTSCEEEESSGGGHHHHHHHHHHHTCSCCHHHHTTTTC------TTCSSCSS
T ss_pred CCCcChhHHHHHHHHHHHhCcCCCCCCCCCCCEEEEcCCcccHHHHHHHHHhCCCCCHHHHHHHhc------CCCCCCCC
Confidence 34455666656666666664 4676554 4555 455556775 34444556654 25556788
Q ss_pred cCCCCCCcccccccccCchHHHHHHHHhcccccC-------CCeEEEEeCccccCcchHHHHHHHHHhCCCC-EEEEEEc
Q 019322 131 YGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK-------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRN 202 (343)
Q Consensus 131 ~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~-------~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~n 202 (343)
+....+++..++|++|+++|.|+|+|+|.++.+. +++|||++|||++++|++||++++|++++|| +|+|++|
T Consensus 102 p~~~~~g~~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v~GDG~~~eG~~~Eal~~A~~~~L~~livi~nn 181 (632)
T 3l84_A 102 PEISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACSLAGLHKLDNFILIYDS 181 (632)
T ss_dssp CCTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTTCCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CCCCCCCcccCCcchhhHHHHHHHHHHHHHhhccccccCCCCCeEEEEECCcchhhccHHHHHHHHHHcCCCcEEEEEEC
Confidence 8765678888899999999999999999987654 8999999999999999999999999999996 9999999
Q ss_pred CCCccccccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCCCCCCC-
Q 019322 203 NGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKY- 281 (343)
Q Consensus 203 N~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~~Y- 281 (343)
|+|++++++.... ..++.+++++|||++++|||||++++.+++++|.+ .++|+||+|+|+|..||+...++..+
T Consensus 182 N~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~vdGhd~~~l~~al~~A~~----~~~P~lI~v~T~kG~G~~~~e~~~~~H 256 (632)
T 3l84_A 182 NNISIEGDVGLAF-NENVKMRFEAQGFEVLSINGHDYEEINKALEQAKK----STKPCLIIAKTTIAKGAGELEGSHKSH 256 (632)
T ss_dssp CSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEETTCHHHHHHHHHHHHT----CSSCEEEEEECCTTTTCGGGTTCGGGS
T ss_pred CCcccccchhhhc-ChhHHHHHHHcCCeEEEEeeCCHHHHHHHHHHHHh----CCCCEEEEEeeEeeecCCCCCCccccc
Confidence 9999998877653 57899999999999999999999999999887764 68999999999999999854332221
Q ss_pred ---CCHHHHHHH
Q 019322 282 ---RPVDEIEWW 290 (343)
Q Consensus 282 ---r~~~e~~~~ 290 (343)
-+++|+++.
T Consensus 257 g~~l~~e~~~~~ 268 (632)
T 3l84_A 257 GAPLGEEVIKKA 268 (632)
T ss_dssp SSCCCHHHHHHH
T ss_pred CCCCCHHHHHHH
Confidence 245666554
No 19
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.96 E-value=8e-28 Score=249.08 Aligned_cols=195 Identities=23% Similarity=0.208 Sum_probs=150.5
Q ss_pred CcEEE-c-cCcc---hHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCcccccCCC-CCCcccccccccCchHHHHHHHHhc
Q 019322 87 DDFVV-P-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYAL 159 (343)
Q Consensus 87 ~D~v~-~-~yR~---~~~~l~~G~-~~~~~~~~~~g~~~~~~~G~~~~~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a~ 159 (343)
.|.++ + .|-+ .+++...|+ ...+-|..|+.. |+..+.|+... .+++..++|+||+++|.|+|+|+|.
T Consensus 59 rDrfvls~GH~s~~lYa~l~l~G~~~~~~~l~~~r~~------~s~~~ghp~~~~~~gve~~tG~lG~gl~~AvG~AlA~ 132 (663)
T 3kom_A 59 RDRFVLSNGHGSMLLYSLLHLTGYDLSIEDIKNFRQL------HSKTPGHPEYGYTPGVETTTGPLGQGVANAVGMALGE 132 (663)
T ss_dssp SCEEEECSSSCHHHHHHHHHHHTCSCCHHHHTTTTST------TCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHH
T ss_pred CCeEEEeCCcccHHHHHHHHHhCCCCCHHHHHhhccC------CCCCCCCCCCCCCCCcccCCcchhhHHHHHHHHHHhH
Confidence 57555 3 5665 333445675 444446666642 56667887654 5678889999999999999999999
Q ss_pred ccccC----------CCeEEEEeCccccCcchHHHHHHHHHhCCCC-EEEEEEcCCCccccccccccCCccHHHhHhhcC
Q 019322 160 KMDRK----------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (343)
Q Consensus 160 k~~~~----------~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (343)
++.+. +++|+|++|||++++|++||+|++|++++|| +|+|++||+|++++++.... .+++.+++++||
T Consensus 133 ~~~~~~~~~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livi~dnN~~~i~~~~~~~~-~~d~~~~~~a~G 211 (663)
T 3kom_A 133 KLLSDRYNTPDLKVIDHHTYVFLGDGCLMEGVSHEACSLAGTLGLNKLVAFWDDNNISIDGDTKGWF-SDNTPERFRAYG 211 (663)
T ss_dssp HHHHHHHCBTTBCSCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECC-----CGGGTC-CCCHHHHHHHTT
T ss_pred HhhcccccccccccCCCeEEEEECchhhhhchHHHHHHHHHHhCCCeEEEEEECCCcccccchhhhc-chhHHHHHHHCC
Confidence 87653 7899999999999999999999999999996 89999999999998877654 578999999999
Q ss_pred ceEE-EEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCCCCCCC----CCHHHHHHHH
Q 019322 229 VRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKY----RPVDEIEWWR 291 (343)
Q Consensus 229 ~~~~-~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~~Y----r~~~e~~~~~ 291 (343)
|+++ .|||||++++.+++++|.+. .++|+||+|+|+|..||+...++..+ .+++|+++.+
T Consensus 212 ~~~~~~vdG~d~~~l~~al~~A~~~---~~~P~lI~~~T~kg~G~~~~e~~~~~Hg~~l~~e~~~~~~ 276 (663)
T 3kom_A 212 WHVIENVDGHDFVAIEKAINEAHSQ---QQKPTLICCKTVIGFGSPEKAGTASVHGSPLSDQERASAA 276 (663)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHHC---SSSCEEEEEECCTTTTCTTTTTCSSTTSSCCCHHHHHHHH
T ss_pred CeEEEEEcCCCHHHHHHHHHHHHhc---CCCCEEEEEecccccccCCCCCCccccCCCCCHHHHHHHH
Confidence 9999 99999999999998877652 47999999999999999865433222 2457766543
No 20
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.95 E-value=1e-27 Score=249.54 Aligned_cols=194 Identities=24% Similarity=0.248 Sum_probs=144.9
Q ss_pred CcEEE-c-cCcc---hHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCcccccCCC-CCCcccccccccCchHHHHHHHHhc
Q 019322 87 DDFVV-P-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYAL 159 (343)
Q Consensus 87 ~D~v~-~-~yR~---~~~~l~~G~-~~~~~~~~~~g~~~~~~~G~~~~~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a~ 159 (343)
.|.++ + .|-+ .+++...|+ ...+-|..|+.. |+..+.|+... .+++..++|+||+++|.|+|+|+|.
T Consensus 98 rDrfvls~GH~s~~lYa~l~l~G~~~~~~~l~~~r~~------~s~~~ghp~~~~~~gve~~tG~lG~gl~~AvG~AlA~ 171 (711)
T 3uk1_A 98 RDRFVLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQL------HSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGE 171 (711)
T ss_dssp CCEEEECSGGGHHHHHHHHHHHTCSCCHHHHHTTTST------TCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHH
T ss_pred CCeEEEeCCcccHHHHHHHHHhCCCCCHHHHHhhccc------cCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Confidence 57555 3 4555 233445676 444556666653 55667888653 4678889999999999999999999
Q ss_pred ccccC----------CCeEEEEeCccccCcchHHHHHHHHHhCCCC-EEEEEEcCCCccccccccccCCccHHHhHhhcC
Q 019322 160 KMDRK----------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (343)
Q Consensus 160 k~~~~----------~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (343)
++.+. +++|||++|||++++|++||+|++|++++|| +|+|++||+|++++++.... ..++.+++++||
T Consensus 172 ~~~~~~~n~~~~~~~d~~vv~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~~i~~~~~~~~-~~d~~~~~~a~G 250 (711)
T 3uk1_A 172 ALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWF-HDDTPKRFEAYG 250 (711)
T ss_dssp HHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTT
T ss_pred HhhcccccccccccCCCeEEEEECCcchhhccHHHHHHHHHHhCCCcEEEEEECCCcccccchhhhc-CCCHHHHHHHcC
Confidence 87653 7899999999999999999999999999996 99999999999998877664 578999999999
Q ss_pred ceEEE-EeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCCCCCCCC----CHHHHHHHH
Q 019322 229 VRSIR-VDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYR----PVDEIEWWR 291 (343)
Q Consensus 229 ~~~~~-VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~~Yr----~~~e~~~~~ 291 (343)
|++++ |||||++++.+++++|.+ .++|+||+|+|+|..||+...++..|. +++|+++.+
T Consensus 251 ~~~~~~vdG~d~~~l~~Al~~A~~----~~~P~lI~v~T~kG~G~~~~e~~~~~Hg~~l~~e~~~~~~ 314 (711)
T 3uk1_A 251 WNVIPNVNGHDVDAIDAAIAKAKR----SDKPSLICCKTRIGNGAATKAGGHDVHGAPLGADEIAKTR 314 (711)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHTT----CSSCEEEEEEC--------------------CHHHHHHHH
T ss_pred CcEEEEeCCCCHHHHHHHHHHHHh----CCCCEEEEEccccccCCCCCCCcccccCCCCCHHHHHHHH
Confidence 99998 999999999999887754 589999999999999998654443332 356666543
No 21
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.95 E-value=2.4e-27 Score=246.13 Aligned_cols=213 Identities=23% Similarity=0.228 Sum_probs=162.8
Q ss_pred ccchhhHHHHHHH-hcCC---------CCcEEEc--cCcch---HHHHHcCC-CHHHHHHHhhcCCCCCCCCCCcccccC
Q 019322 69 TTSGEEAINIASA-AAIK---------NDDFVVP--QYREP---GVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYG 132 (343)
Q Consensus 69 ~~~G~Ea~~v~~~-~~l~---------~~D~v~~--~yR~~---~~~l~~G~-~~~~~~~~~~g~~~~~~~G~~~~~h~~ 132 (343)
++.|.--+.+++- ..|+ +.|.++. .|-+. +++...|. .+.+-|..++. .|+..+.|+.
T Consensus 55 ~~l~~~~i~~~L~~~~l~~~p~~p~~~~rDrfvls~GH~~~~lYa~l~l~G~~~~~~~l~~~rq------~gs~~~Ghp~ 128 (690)
T 3m49_A 55 MPMGAAPMAYTLWTQFMKHNPNNPTWFNRDRFVLSAGHGSMLLYSLLHLSGYDVTMDDLKNFRQ------WGSKTPGHPE 128 (690)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTCTTCTTSCEEEESSGGGHHHHHHHHHHTTSSCCHHHHTTTTC------TTCSSCSSCC
T ss_pred cchHHHHHHHHHHHHHhcCCCCCCCCCCCCeEEECCccHHHHHHHHHHHHCCCCCHHHHHhhcc------CCCCCCCCCC
Confidence 4445444444443 4555 3585553 45542 44455675 33444556654 3666778887
Q ss_pred C-CCCCcccccccccCchHHHHHHHHhcccccC----------CCeEEEEeCccccCcchHHHHHHHHHhCCCC-EEEEE
Q 019322 133 S-NKHNYFTVSSTIATQLPHAVGAAYALKMDRK----------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFIC 200 (343)
Q Consensus 133 ~-~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~----------~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv 200 (343)
. ..+++..++|++|+++|.|+|+|+|.++.+. +++|+|++|||++++|++||++++|++++|| +|+|+
T Consensus 129 ~~~~pgv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~ 208 (690)
T 3m49_A 129 YGHTAGVDATTGPLGQGIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGVSAEASSLAAHLQLGRLVVLY 208 (690)
T ss_dssp TTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCSCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEE
T ss_pred CCCCCccccCCccccccHHHHHHHHHHHHHhhccccccccccCCCeEEEEECchhhhhccHHHHHHHHHHhCCCeEEEEE
Confidence 5 3567888899999999999999999987543 8899999999999999999999999999995 89999
Q ss_pred EcCCCccccccccccCCccHHHhHhhcCceEEEE-eCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCCCCC
Q 019322 201 RNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST 279 (343)
Q Consensus 201 ~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~V-dG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~ 279 (343)
+||+|++++++... ...++.+++++|||++++| ||||++++.+++++|.+ ..++|+||+|+|+|..|++...++.
T Consensus 209 dnN~~~i~~~~~~~-~~~d~~~~~~a~G~~~~~v~DG~d~~~l~~Al~~a~~---~~~~P~lI~v~T~kG~G~~~~~~~~ 284 (690)
T 3m49_A 209 DSNDISLDGDLNRS-FSESVEDRYKAYGWQVIRVEDGNDIEAIAKAIEEAKA---DEKRPTLIEVRTTIGFGSPNKSGKS 284 (690)
T ss_dssp EECSBCSSSBGGGT-CCCCHHHHHHHHTCEEEEESCTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSG
T ss_pred ECCCeecccchhhc-cchhHHHHHHHcCCcEEEEecCCCHHHHHHHHHHHHh---cCCCCEEEEEEeecccccCcccCcc
Confidence 99999999887654 3578999999999999999 99999999998887764 1579999999999999997544433
Q ss_pred CC----CCHHHHHHHH
Q 019322 280 KY----RPVDEIEWWR 291 (343)
Q Consensus 280 ~Y----r~~~e~~~~~ 291 (343)
.| -+++|++..+
T Consensus 285 ~~Hg~~~~~e~~~~~~ 300 (690)
T 3m49_A 285 ASHGSPLGVEETKLTK 300 (690)
T ss_dssp GGTSSCCCHHHHHHHH
T ss_pred cccCCCCCHHHHHHHH
Confidence 22 2456676554
No 22
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.95 E-value=6.2e-27 Score=248.19 Aligned_cols=220 Identities=17% Similarity=0.148 Sum_probs=167.3
Q ss_pred cccccchhhHHHHH-HHhcCC------CCcEEEc-cCcc---hHHHHHcCCCHHHHHHHhhcCCCCCCCCCCcccccCCC
Q 019322 66 FYLTTSGEEAINIA-SAAAIK------NDDFVVP-QYRE---PGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSN 134 (343)
Q Consensus 66 ~~~~~~G~Ea~~v~-~~~~l~------~~D~v~~-~yR~---~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~ 134 (343)
+..++.|.--+..+ ....|+ +.|+|+. .|-+ .++++..|...++-|..|+... .+.+++.|+...
T Consensus 106 H~gs~ls~ael~~~l~~~~~~~~~~~~~~D~V~~~GH~sp~~Ya~~~l~Gr~~~e~l~~fRq~~----~~~gl~~~p~~~ 181 (886)
T 2qtc_A 106 HMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEV----HGNGLSSYPHPK 181 (886)
T ss_dssp CSHHHHHHHHHHHHHHHHTCCCCCSSSCCCEEECCGGGHHHHHHHHHHTTSSCHHHHTTBTCCT----TSSCBCSSCCTT
T ss_pred CcCCcHHHHHHHHHHHHHhcCCCCCCCCCCEEEEcchhHHHHHHHHHHhCCCCHHHHHhccCCC----CCCCCCCCCCcc
Confidence 33344444333333 334466 4687766 4555 4556678976666677766431 245677777653
Q ss_pred -CCC-cccccccccCchHHHHHHHHhccc-------ccCCCeEEEEeCccccCcchHHHHHHHHHhCCC-CEEEEEEcCC
Q 019322 135 -KHN-YFTVSSTIATQLPHAVGAAYALKM-------DRKDACAVTYFGDGGTSEGDFHAALNFSAVTEA-PVIFICRNNG 204 (343)
Q Consensus 135 -~~~-~~~~~g~lG~~lp~A~G~A~a~k~-------~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~L-pvi~vv~nN~ 204 (343)
.++ ..+.+|++|.+++.|+|+|++.|+ ++.+++|||++|||++++|++|||||+|+.++| |+||||+||+
T Consensus 182 ~~p~~~~~~tG~~G~g~s~AiG~A~a~~~l~~~~~~~~~~~~v~aviGDG~l~eG~~~EAl~~A~~~~L~nli~Vvn~N~ 261 (886)
T 2qtc_A 182 LMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNL 261 (886)
T ss_dssp TSTTTCCCCCCSTTHHHHHHHHHHHHHHHHHHTTSCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEECS
T ss_pred cCCCcccccccccCccHHHHHHHHHHhhhhcccccccCCCCEEEEEECCccccccchHHHHHHHHHcCCCcEEEEEECCC
Confidence 244 667899999999999999999997 778999999999999999999999999999999 6999999999
Q ss_pred Cccccccccc-cCCccHHHhHhhcCceEEEE-------------------------------------------------
Q 019322 205 WAISTPISDQ-FRSDGAVVKGRAYGVRSIRV------------------------------------------------- 234 (343)
Q Consensus 205 ~~~~~~~~~~-~~~~~~~~~a~a~G~~~~~V------------------------------------------------- 234 (343)
+++++++... ....++.++++++||++++|
T Consensus 262 ~si~~~v~~~~~~~~~l~~~~~~~G~~~~~v~~g~~~~~ll~~~~~~~l~~~~~~~~d~~~q~~~~~~g~~~r~~~F~~~ 341 (886)
T 2qtc_A 262 QRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKY 341 (886)
T ss_dssp BCSSSBSCTTSCHHHHHHHHHHHTTCEEEEECBCTTHHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTSTTS
T ss_pred cccCCCccccccccHHHHHHHHhCCCCEEEEecchhHHHHHccCCchHHHHHHHhccchhhhhhhhccchHHHHhhcccc
Confidence 9999988763 23567999999999999998
Q ss_pred --------------------eCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCC--CCCCC----CCCCHHHHH
Q 019322 235 --------------------DGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTT--SDDST----KYRPVDEIE 288 (343)
Q Consensus 235 --------------------dG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~--~dd~~----~Yr~~~e~~ 288 (343)
||||+.+|++|+++|++. .++|+||+++|+|.+||+. .++.. .|++.+|++
T Consensus 342 ~~~~~l~~~~~d~~i~~l~~dGhD~~~l~~a~~~A~~~---~~~PtlI~~~T~KG~G~~~~~e~~~~~H~~~~l~~~~~~ 418 (886)
T 2qtc_A 342 PETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQET---KGKATVILAHTIKGYGMGDAAKGKNIAHQVKKMNMDGVR 418 (886)
T ss_dssp HHHHTTTTTCCHHHHHTCCBGGGCHHHHHHHHHHHHHC---CSSCEEEEEECCTTTTCTTCC-------------CHHHH
T ss_pred hHHHHHHhhcChhhHhhcccCCCCHHHHHHHHHHHHHc---CCCCEEEEEeeeeccccchhhcCCccccCCCCCCHHHHH
Confidence 699999999999999874 4689999999999999973 22222 278889999
Q ss_pred HHHh
Q 019322 289 WWRT 292 (343)
Q Consensus 289 ~~~~ 292 (343)
+|++
T Consensus 419 ~~r~ 422 (886)
T 2qtc_A 419 HIRD 422 (886)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8873
No 23
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=99.91 E-value=9e-25 Score=224.85 Aligned_cols=163 Identities=17% Similarity=0.211 Sum_probs=128.7
Q ss_pred cccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcC-CCcccc----------c
Q 019322 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAIST----------P 210 (343)
Q Consensus 142 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~----------~ 210 (343)
.|++|+++|.|+|++++. ++++|||++|||+|+++ +++|++|+++++|+++||.|| +|++.. .
T Consensus 419 ~g~~G~~l~~A~Gaala~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~lp~~~vv~nN~~~~~~~~~~~~~~~~~~ 492 (603)
T 4feg_A 419 FATMGVGIPGAIAAKLNY----PERQVFNLAGDGGASMT--MQDLATQVQYHLPVINVVFTNCQYGFIKDEQEDTNQNDF 492 (603)
T ss_dssp SCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHCSSCC
T ss_pred cccccchhHHHhhHHHhC----CCCcEEEEeccHHHhhh--HHHHHHHHHHCcCeEEEEEECCchHHHHHHHHHhcCCCc
Confidence 589999999999999985 57899999999999875 677999999999988777776 588622 1
Q ss_pred cccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEE---ecCCCCCCCCCCCCCCCHH--
Q 019322 211 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT---YRVGHHTTSDDSTKYRPVD-- 285 (343)
Q Consensus 211 ~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t---~R~~gHs~~dd~~~Yr~~~-- 285 (343)
........|+.+++++||+++++|+ +++++.+++++|++ .+.+||+|||++| +|..+|...|++..||..+
T Consensus 493 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~--~~~~gP~lIev~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (603)
T 4feg_A 493 IGVEFNDIDFSKIADGVHMQAFRVN--KIEQLPDVFEQAKA--IAQHEPVLIDAVITGDRPLPAEKLRLDSAMSSAADIE 568 (603)
T ss_dssp CSSBCCCCCHHHHHHHTTCEEEEEC--BGGGHHHHHHHHHH--HTTTSCEEEEEECCCCCCCCTTSCCCCTTTSCHHHHH
T ss_pred ccCcCCCCCHHHHHHHCCCeEEEEC--CHHHHHHHHHHHHH--hcCCCcEEEEEEeCCCCCCCcccchhhhhhhhHHHHH
Confidence 1122345689999999999999998 67788888877762 1468999999999 5556899999999998654
Q ss_pred HHHHHHhCCCcHHHHHHHHHHcCCCCHHHH
Q 019322 286 EIEWWRTTQDPVTRFRKWIESNGWWNGDIE 315 (343)
Q Consensus 286 e~~~~~~~~dPi~~~~~~L~~~g~~~~~~~ 315 (343)
+.++|. ++||+++|+++|.++|+|++++.
T Consensus 569 ~~~~~~-~~d~~~~~~~~l~~~g~~~~~~~ 597 (603)
T 4feg_A 569 AFKQRY-EAQDLQPLSTYLKQFGLDDLQHQ 597 (603)
T ss_dssp HHHHHH-TCTTCCCHHHHHHHTTC------
T ss_pred HHHhhC-CcccCCchHHHHHHcCCchhhhh
Confidence 566665 59999999999999999998654
No 24
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.80 E-value=5.5e-19 Score=184.93 Aligned_cols=195 Identities=18% Similarity=0.138 Sum_probs=148.9
Q ss_pred ccccccchhhHHHHHHHhcCC--CCcEEEccCcchHHHH------HcCCC----------HHHH---HHHhhcCCCCCCC
Q 019322 65 SFYLTTSGEEAINIASAAAIK--NDDFVVPQYREPGVLL------WRGFS----------MQEF---ANQCFGNKADYGK 123 (343)
Q Consensus 65 ~~~~~~~G~Ea~~v~~~~~l~--~~D~v~~~yR~~~~~l------~~G~~----------~~~~---~~~~~g~~~~~~~ 123 (343)
+++.++.|.--+.+.+...+. ..|.+|..--||+..+ ..|.. ++++ |.+| .+
T Consensus 83 GH~G~~~g~a~iy~~~~~~~~~~~rDr~fvls~GHg~p~lYa~l~l~G~~~~~~p~~s~d~e~Lk~lfrqf-s~------ 155 (845)
T 3ahc_A 83 GHWGTTPGLNFLLAHINRLIADHQQNTVFIMGPGHGGPAGTSQSYVDGTYTEYYPNITKDEAGLQKFFRQF-SY------ 155 (845)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHTBCBCCEESSGGGHHHHHHHHHHHTHHHHHCTTSCSSHHHHHHHHHHB-TC------
T ss_pred CCCCCCHHHHHHHHHHHHhcccCCCceEEEECcCcHHHHHHHHHHHcCCCccccccccccHHHHHHHHHhc-cC------
Confidence 455566666555444433333 3466433334553222 34542 4455 5555 32
Q ss_pred CCCcccccCCCCCCcccccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcch---HHHHHHHHHhCCC-CEEEE
Q 019322 124 GRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD---FHAALNFSAVTEA-PVIFI 199 (343)
Q Consensus 124 G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~---~~Eal~~A~~~~L-pvi~v 199 (343)
-.++++|+....+++...+|+||++++.|+|+|+. +++..|+|++|||+.++|. .||+.+++..+++ ++|.|
T Consensus 156 ~gg~pgHp~~~tpGve~~tG~LGqGls~AvG~A~~----~~~~~v~~~~GDGe~e~GsLAg~wea~~~~~~~~l~nl~~i 231 (845)
T 3ahc_A 156 PGGIPSHFAPETPGSIHEGGELGYALSHAYGAVMN----NPSLFVPCIIGDGEAETGPLATGWQSNKLVNPRTDGIVLPI 231 (845)
T ss_dssp TTSBCSSCCTTSTTCSCCCSSTTCHHHHHHHHHTT----CTTCEEEEEEETTGGGSHHHHHHGGGGGSCCTTTSCEEEEE
T ss_pred CCCCCCCCCCCCCCeecCCCCccchHhHHhhhhhc----CCCCeEEEEECCCchhhhcchhhhHHhhhhhhhcCCCEEEE
Confidence 22389999766789999999999999999999964 5788999999999999999 9999999999999 89999
Q ss_pred EEcCCCccccccccc-cCCccHHHhHhhcCceEE-EEeC-C--CHHHHHHHHHHHHH-----------Hhhc--cCCc--
Q 019322 200 CRNNGWAISTPISDQ-FRSDGAVVKGRAYGVRSI-RVDG-N--DALAIYSAVHAARE-----------MAIG--EGRP-- 259 (343)
Q Consensus 200 v~nN~~~~~~~~~~~-~~~~~~~~~a~a~G~~~~-~VdG-~--d~~~v~~a~~~a~~-----------~~r~--~~gP-- 259 (343)
+++|+++|+.++... .+.+++.+++++|||.++ .||| | |++++.+++.+|++ .+|+ .++|
T Consensus 232 ~D~N~~~i~g~t~l~~~~~e~l~~rf~a~Gw~v~~~vdG~~~~D~~~i~~a~~~al~~~~~~i~~i~~~A~~~~~~kP~w 311 (845)
T 3ahc_A 232 LHLNGYKIANPTILARISDEELHDFFRGMGYHPYEFVAGFDNEDHMSIHRRFAELFETIFDEICDIKAAAQTDDMTRPFY 311 (845)
T ss_dssp EEECSBSSSSBCHHHHSCHHHHHHHHHHTTEEEEEEECSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCE
T ss_pred EECCCCcCCCCccccccCcHHHHHHHHHCCCEEeEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 999999999988643 456789999999999999 9999 9 99999998876663 2444 3689
Q ss_pred EEEEEEEecCC
Q 019322 260 ILIEALTYRVG 270 (343)
Q Consensus 260 ~lIe~~t~R~~ 270 (343)
++|.++|.+..
T Consensus 312 ~~Ii~rT~kG~ 322 (845)
T 3ahc_A 312 PMLIFRTPKGW 322 (845)
T ss_dssp EEEEEECCTTT
T ss_pred eEEEEECcccC
Confidence 99999999888
No 25
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=99.71 E-value=2.4e-17 Score=169.06 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=101.4
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcC-CCccccccccc-----
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPISDQ----- 214 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~~~~~~----- 214 (343)
..|+||+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++||.|| +|++.......
T Consensus 411 ~~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~q~~~~~~~ 484 (590)
T 1v5e_A 411 LFATMGIAIPGGLGAKNTY----PDRQVWNIIGDGAFSMT--YPDVVTNVRYNMPVINVVFSNTEYAFIKNKYEDTNKNL 484 (590)
T ss_dssp SSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCTTGGGTTSSSCCSC
T ss_pred CCCcccChHHHHHHHHHhC----CCCeEEEEEechHHhch--HHHHHHHHHhCCCCEEEEEECCchHHHHHHHHHhcCCC
Confidence 3689999999999999995 57899999999999865 588999999999976666555 79887643211
Q ss_pred ----cCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCC
Q 019322 215 ----FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 270 (343)
Q Consensus 215 ----~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~ 270 (343)
....|+.++|++||+++++|+ +++++.+++++|++.+|. ++|+|||++|+|..
T Consensus 485 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~-~gp~liev~~~~~~ 541 (590)
T 1v5e_A 485 FGVDFTDVDYAKIAEAQGAKGFTVS--RIEDMDRVMAEAVAANKA-GHTVVIDCKITQDR 541 (590)
T ss_dssp CCCCCCCCCHHHHHHHTTSEEEEEC--BHHHHHHHHHHHHHHHHT-TCCEEEEEECCSCC
T ss_pred ccccCCCCCHHHHHHHcCCEEEEEC--CHHHHHHHHHHHHHhcCC-CCCEEEEEEecccc
Confidence 234689999999999999998 799999999999886554 79999999998854
No 26
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=99.69 E-value=2.6e-17 Score=169.60 Aligned_cols=122 Identities=20% Similarity=0.187 Sum_probs=100.2
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcC-CCccccccc-------
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPIS------- 212 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~~~~------- 212 (343)
.+|++|+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++||.|| +|++.....
T Consensus 440 ~~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 513 (616)
T 2pan_A 440 QAGPLGWTIPAALGVCAAD----PKRNVVAISGDFDFQFL--IEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDY 513 (616)
T ss_dssp TTCCTTCHHHHHHHHHHHC----TTCEEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHGGGGTCCC
T ss_pred CcccccchHHHHHHHHHhC----CCCcEEEEEcchhhhCC--HHHHHHHHHhCCCeEEEEEECCcchHHHHHHHHhcCCc
Confidence 3689999999999999995 57899999999999865 578999999999986665555 688753211
Q ss_pred -------c--ccC----CccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCC
Q 019322 213 -------D--QFR----SDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 270 (343)
Q Consensus 213 -------~--~~~----~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~ 270 (343)
. ... ..|+.+++++||+++++|+ +++++.+++++|++++|..++|+|||++|+|..
T Consensus 514 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~~~gp~lIev~~~~~~ 582 (616)
T 2pan_A 514 CVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVF--KPEDIAPAFEQAKALMAQYRVPVVVEVILERVT 582 (616)
T ss_dssp SCBCCCCCTTCGGGTTCCCCHHHHHHHTTCEEEEEC--SGGGHHHHHHHHHHHHHHHCSCEEEEEEBCSCC
T ss_pred cccccccccccccCCCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHhhcccCCCcEEEEEEecccc
Confidence 0 111 2689999999999999998 788999999999987766789999999998865
No 27
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=99.68 E-value=5.1e-17 Score=165.68 Aligned_cols=117 Identities=18% Similarity=0.233 Sum_probs=97.2
Q ss_pred cccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEE-cCCCccccccc-------c
Q 019322 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR-NNGWAISTPIS-------D 213 (343)
Q Consensus 142 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~-nN~~~~~~~~~-------~ 213 (343)
.|+||+++|.|+|+|+|.| +++++|||++|||+|+++ +++|++|.++++|+++||. ||+|++..... .
T Consensus 418 ~g~~G~~l~~AiGaa~a~~--~~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 493 (563)
T 2uz1_A 418 LGSMGVGFGTALGAQVADL--EAGRRTILVTGDGSVGYS--IGEFDTLVRKQLPLIVIIMNNQSWGATLHFQQLAVGPNR 493 (563)
T ss_dssp TCCTTTHHHHHHHHHHHHH--HHTCEEEEEEEHHHHGGG--TTHHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCTTC
T ss_pred CccccChHHHHHHHHHHhh--CCCCeEEEEEccHHHhCC--HHHHHHHHHhCCCeEEEEEeCCcchHHHHHHHHhcCCCc
Confidence 5899999999999999976 578899999999999876 5689999999999766655 55788765421 1
Q ss_pred c----cCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEec
Q 019322 214 Q----FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (343)
Q Consensus 214 ~----~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R 268 (343)
. ....|+.+++++||+++++|+ +++++.+++++|++ .++|+|||+.|++
T Consensus 494 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~ 546 (563)
T 2uz1_A 494 VTGTRLENGSYHGVAAAFGADGYHVD--SVESFSAALAQALA----HNRPACINVAVAL 546 (563)
T ss_dssp CCSCBCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHH----SSSCEEEEEECCS
T ss_pred ccCCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHH----CCCCEEEEEEecc
Confidence 1 134689999999999999998 89999999988875 5799999999974
No 28
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=99.67 E-value=5.4e-17 Score=164.23 Aligned_cols=114 Identities=23% Similarity=0.325 Sum_probs=94.9
Q ss_pred ccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcC-CCccccccc---------
Q 019322 143 STIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPIS--------- 212 (343)
Q Consensus 143 g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~~~~--------- 212 (343)
|+||+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++||.|| +|++.+...
T Consensus 401 g~~G~~l~~A~G~a~a~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~ 474 (528)
T 1q6z_A 401 GGLGFALPAAIGVQLAE----PERQVIAVIGDGSANYS--ISALWTAAQYNIPTIFVIMNNGTYGALRWFAGVLEAENVP 474 (528)
T ss_dssp CCTTSHHHHHHHHHHHC----TTSCEEEEEEHHHHTTT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCCSCC
T ss_pred ccccchHHHHHHHHHhC----CCCcEEEEECCcHHHhh--HHHHHHHHHhCCCeEEEEEeCCcchHhHHHHHHhcCCCcc
Confidence 89999999999999995 56789999999999977 788999999999987777666 588865421
Q ss_pred -cccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEec
Q 019322 213 -DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (343)
Q Consensus 213 -~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R 268 (343)
......|+.+++++||+++++|+ +++++.++++++++ .++|+|||++|.|
T Consensus 475 ~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~ 525 (528)
T 1q6z_A 475 GLDVPGIDFRALAKGYGVQALKAD--NLEQLKGSLQEALS----AKGPVLIEVSTVS 525 (528)
T ss_dssp SCBCCCCCHHHHHHHHTCEEEEES--SHHHHHHHHHHHHT----CSSCEEEEEEBCC
T ss_pred cCCCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHH----CCCcEEEEEEecC
Confidence 11245689999999999999998 67788877776654 5899999999976
No 29
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=99.66 E-value=7.7e-17 Score=164.54 Aligned_cols=117 Identities=20% Similarity=0.260 Sum_probs=96.7
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcC-CCccccccc-------
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPIS------- 212 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~~~~------- 212 (343)
..|+||+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|.++++|+++||.|| +|++.....
T Consensus 418 g~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 491 (566)
T 1ozh_A 418 GQQTMGVALPWAIGAWLVN----PERKVVSVSGDGGFLQS--SMELETAVRLKANVLHLIWVDNGYNMVAIQEEKKYQRL 491 (566)
T ss_dssp TTCCTTCHHHHHHHHHHHS----TTSEEEEEEEHHHHHHH--TTHHHHHHHHTCCEEEEEEECSBCHHHHHHHHHHHSSC
T ss_pred CcccccchHHHHHHHHHhC----CCCCEEEEEcChHHhcc--HHHHHHHHHhCCCcEEEEEECCchhHHHHHHHHhcCCC
Confidence 3689999999999999995 57899999999999864 577999999999977666555 688765321
Q ss_pred --cccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecC
Q 019322 213 --DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 269 (343)
Q Consensus 213 --~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~ 269 (343)
......|+.+++++||+++++|+ +++++.+++++|++ .++|+|||+.|+|.
T Consensus 492 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~ 544 (566)
T 1ozh_A 492 SGVEFGPMDFKAYAESFGAKGFAVE--SAEALEPTLRAAMD----VDGPAVVAIPVDYR 544 (566)
T ss_dssp CSCBCCCCCHHHHHHTTTSEEEECC--SGGGHHHHHHHHHH----SSSCEEEEEEBCCT
T ss_pred ccCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEeCCC
Confidence 22334689999999999999998 78899888888875 57999999999763
No 30
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=99.66 E-value=8.8e-17 Score=164.31 Aligned_cols=116 Identities=25% Similarity=0.312 Sum_probs=96.0
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEE-cCCCcccccc--------
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR-NNGWAISTPI-------- 211 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~-nN~~~~~~~~-------- 211 (343)
..|++|+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++||. ||+|++....
T Consensus 434 g~g~mG~~l~~AiGaa~a~----~~~~vv~i~GDG~~~~~--~~~L~~a~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 507 (573)
T 2iht_A 434 GCSSFGYGIPAAIGAQMAR----PDQPTFLIAGDGGFHSN--SSDLETIARLNLPIVTVVVNNDTNGLIELYQNIGHHRS 507 (573)
T ss_dssp SSCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHHSSC
T ss_pred CCcccccHHHHHHHHHHhC----CCCcEEEEEccHHHHhH--HHHHHHHHHhCCCeEEEEEECCcchhhHHHHHHhcCCC
Confidence 3689999999999999995 57899999999999865 5789999999999765554 5568876542
Q ss_pred -c--cccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEec
Q 019322 212 -S--DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (343)
Q Consensus 212 -~--~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R 268 (343)
. ..+...|+.+++++||+++++|+ +++++.+++++|++ .++|+|||++|+|
T Consensus 508 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~ 561 (573)
T 2iht_A 508 HDPAVKFGGVDFVALAEANGVDATRAT--NREELLAALRKGAE----LGRPFLIEVPVNY 561 (573)
T ss_dssp CGGGTBCCCCCHHHHHHHTTCEEEECC--SHHHHHHHHHHHHT----SSSCEEEEEEBCC
T ss_pred cCccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEECCC
Confidence 1 22334689999999999999998 88998888887764 5899999999988
No 31
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=99.66 E-value=3.5e-17 Score=166.88 Aligned_cols=121 Identities=14% Similarity=0.153 Sum_probs=97.8
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEE-cCCCccccccc------c
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR-NNGWAISTPIS------D 213 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~-nN~~~~~~~~~------~ 213 (343)
..|+||+++|.|+|+|+|.+.++.+++|||++|||+|++ .+++|++|+++++|+++||. ||+|++..... .
T Consensus 411 ~~g~mG~~l~~A~Gaala~~~~~~~~~vv~~~GDG~~~~--~~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 488 (563)
T 2vk8_A 411 LWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQL--TVQEISTMIRWGLKPYLFVLNNDGYTIQKLIHGPKAQYN 488 (563)
T ss_dssp TTCCTTHHHHHHHHHHHHHHHHCTTCCEEEEEEHHHHHH--HGGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGG
T ss_pred chhhhhhHHHHHHHHHHhCcccCCCCCEEEEEcchHhhc--cHHHHHHHHHcCCCcEEEEEECCcchhhhhhhCCCCCcc
Confidence 368999999999999999887777899999999999975 46889999999999766665 55688754321 1
Q ss_pred ccCCccHHHhHhhcCce---EEEEeCCCHHHHHHHHH-HHHHHhhccCCcEEEEEEEec
Q 019322 214 QFRSDGAVVKGRAYGVR---SIRVDGNDALAIYSAVH-AAREMAIGEGRPILIEALTYR 268 (343)
Q Consensus 214 ~~~~~~~~~~a~a~G~~---~~~VdG~d~~~v~~a~~-~a~~~~r~~~gP~lIe~~t~R 268 (343)
.....|+.+++++||++ +++|+ +++++.++++ ++++ ..++|+|||++|++
T Consensus 489 ~~~~~d~~~~a~a~G~~~~~~~~v~--~~~el~~al~~~a~~---~~~~p~liev~~~~ 542 (563)
T 2vk8_A 489 EIQGWDHLSLLPTFGAKDYETHRVA--TTGEWDKLTQDKSFN---DNSKIRMIEVMLPV 542 (563)
T ss_dssp CCCCCCGGGHHHHTTCSSEEEEEEC--BHHHHHHHHTCTTTT---SCSSEEEEEEECCT
T ss_pred cCCCCCHHHHHHHhCCCCCcEEEec--CHHHHHHHHHHHHHh---CCCCcEEEEEEeCc
Confidence 22446899999999999 99999 7888888887 6654 23579999999975
No 32
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=99.66 E-value=2.4e-16 Score=160.26 Aligned_cols=118 Identities=20% Similarity=0.266 Sum_probs=94.5
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEE-EEcCCCccccccc-------
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI-CRNNGWAISTPIS------- 212 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~v-v~nN~~~~~~~~~------- 212 (343)
..|++|+++|.|+|+++|. ++++|||++|||+|+++ +++|++|.++++|+++| ++||+|++.....
T Consensus 404 ~~g~mG~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~nN~~~g~~~~~~~~~~~~~ 477 (549)
T 3eya_A 404 NHGSMANAMPQALGAQATE----PERQVVAMCGDGGFSML--MGDFLSVVQMKLPVKIVVFNNSVLGFVAMEMKAGGYLT 477 (549)
T ss_dssp TTCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCCCC-----------
T ss_pred CCchhhhHHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCeEEEEEeCCccHHHHHHHHhcCCCC
Confidence 4589999999999999985 57899999999999754 67899999999997555 5555687643211
Q ss_pred --cccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCC
Q 019322 213 --DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 270 (343)
Q Consensus 213 --~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~ 270 (343)
......|+.+++++||+++++|+ +++++.++++++++ .++|+|||+.|.|..
T Consensus 478 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~~~ 531 (549)
T 3eya_A 478 DGTELHDTNFARIAEACGITGIRVE--KASEVDEALQRAFS----IDGPVLVDVVVAKEE 531 (549)
T ss_dssp -CCBCCCCCHHHHHHHTTSEEEEEC--SGGGHHHHHHHHHH----SSSCEEEEEEBCCCC
T ss_pred cCCcCCCCCHHHHHHHcCCcEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEecccc
Confidence 12234689999999999999997 78899888888875 589999999998754
No 33
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=99.65 E-value=9.2e-17 Score=164.69 Aligned_cols=117 Identities=21% Similarity=0.282 Sum_probs=97.1
Q ss_pred cccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcC-CCccccccc--------
Q 019322 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPIS-------- 212 (343)
Q Consensus 142 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~~~~-------- 212 (343)
.|+||+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++||.|| +|++.....
T Consensus 423 ~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 496 (589)
T 2pgn_A 423 EGILGCGFPMALGAQLAE----PNSRVFLGTGDGALYYH--FNEFRVAVEHKLPVITMVFTNESYGANWTLMNHQFGQNN 496 (589)
T ss_dssp TCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHHSSCC
T ss_pred cchhhhHHHHHHHHHHhC----CCCcEEEEEeeHHHHhh--HHHHHHHHHhCCCeEEEEEECCCcccchHHHHhhcCCCc
Confidence 589999999999999995 57899999999999865 589999999999976665555 588765432
Q ss_pred -cccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCC
Q 019322 213 -DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 270 (343)
Q Consensus 213 -~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~ 270 (343)
..+...|+.+++++||+++++|+ +++++.+++++|++ .++|+|||+.|+|..
T Consensus 497 ~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~~ 549 (589)
T 2pgn_A 497 WTEFMNPDWVGIAKAFGAYGESVR--ETGDIAGALQRAID----SGKPALIEIPVSKTQ 549 (589)
T ss_dssp SCBCCCCCHHHHHHHHTCEEEECT--TTCCHHHHHHHHHH----HCSCEEEEEECCSSS
T ss_pred cccCCCCCHHHHHHHCCCeEEEEC--CHHHHHHHHHHHHh----CCCCEEEEEEecCCC
Confidence 22335789999999999999998 67788888888875 479999999998764
No 34
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=99.65 E-value=2.1e-16 Score=164.58 Aligned_cols=117 Identities=18% Similarity=0.217 Sum_probs=96.1
Q ss_pred cccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEE-EcCCCccccccc--------
Q 019322 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS-------- 212 (343)
Q Consensus 142 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~-------- 212 (343)
.|+||+++|.|+|+|+|. +++.|||++|||+|++ .+++|++|+++++|+++|| +||+|++.....
T Consensus 512 ~G~mG~~lpaAiGaalA~----p~~~Vv~i~GDGsf~~--~~~eL~ta~~~~l~v~ivV~NN~~~g~~~~~~~~~~~~~~ 585 (677)
T 1t9b_A 512 LGTMGYGLPAAIGAQVAK----PESLVIDIDGDASFNM--TLTELSSAVQAGTPVKILILNNEEQGMVTQWQSLFYEHRY 585 (677)
T ss_dssp SCCTTCHHHHHHHHHHHC----TTSEEEEEEEHHHHHH--HGGGHHHHHHHTCCCEEEEEECSSCHHHHHHHHHHSTTCC
T ss_pred cchhhchHHHHHHHHHhC----CCCeEEEEEeehHHhc--cHHHHHHHHHhCCCeEEEEEeCCCchhhhhhhhhhcCCCc
Confidence 579999999999999995 6889999999999986 3567999999999976555 555688754211
Q ss_pred --cccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCC
Q 019322 213 --DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 270 (343)
Q Consensus 213 --~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~ 270 (343)
......|+.++|++||+++++|+ +++++.+++++|++ .++|+|||+.|+|..
T Consensus 586 ~~~~~~~~d~~~la~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~lIev~~~~~~ 639 (677)
T 1t9b_A 586 SHTHQLNPDFIKLAEAMGLKGLRVK--KQEELDAKLKEFVS----TKGPVLLEVEVDKKV 639 (677)
T ss_dssp CSCCCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHH----CSSCEEEEEEBCSSC
T ss_pred ccCcCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHH----CCCcEEEEEEecCCc
Confidence 11235689999999999999997 89999999988875 579999999998854
No 35
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=99.64 E-value=4.2e-16 Score=159.77 Aligned_cols=118 Identities=20% Similarity=0.227 Sum_probs=96.4
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEE-EcCCCccccccc-------
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS------- 212 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~------- 212 (343)
..|++|+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++|| +||+|++.....
T Consensus 424 ~~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 497 (590)
T 1ybh_A 424 GLGAMGFGLPAAIGASVAN----PDAIVVDIDGDGSFIMN--VQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKAN 497 (590)
T ss_dssp SSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHT--TTHHHHHHHTTCCEEEEEEECSBCHHHHHHHHHHSTTC
T ss_pred CcccccchHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCcEEEEEECCcchHHHHHHHHhcCCc
Confidence 3589999999999999996 57899999999999865 578999999999976555 555788754211
Q ss_pred ---ccc--------CCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCC
Q 019322 213 ---DQF--------RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 270 (343)
Q Consensus 213 ---~~~--------~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~ 270 (343)
... ...|+.++|++||+++++|+ +++++.+++++|++ .++|+|||++|+|..
T Consensus 498 ~~~~~~~~p~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~~ 560 (590)
T 1ybh_A 498 RAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVT--KKADLREAIQTMLD----TPGPYLLDVICPHQE 560 (590)
T ss_dssp CCSCBCSCGGGTTSCSSCHHHHHHHTTCCEEEEC--BHHHHHHHHHHHHH----SSSCEEEEEECCTTC
T ss_pred cccccccccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEecCCc
Confidence 111 14589999999999999998 89999999888875 479999999998865
No 36
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=99.64 E-value=3e-16 Score=160.12 Aligned_cols=117 Identities=22% Similarity=0.262 Sum_probs=96.4
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEE-EEcCCCcccccccc----cc
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI-CRNNGWAISTPISD----QF 215 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~v-v~nN~~~~~~~~~~----~~ 215 (343)
..|+||+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++| ++||+|++...... ..
T Consensus 407 ~~g~mG~~l~~A~G~ala~----~~~~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 480 (566)
T 2vbi_A 407 QWGHIGWSVPSAFGNAMGS----QDRQHVVMVGDGSFQLT--AQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYI 480 (566)
T ss_dssp TTCCTTTHHHHHHHHHHTC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGCC
T ss_pred cccchhhHHHHHHHHHHhC----CCCcEEEEEcchHHHhh--HHHHHHHHHhCCCcEEEEEECCcceEEEeeccCCccCC
Confidence 3689999999999999985 57899999999999863 57799999999986555 55668988765431 23
Q ss_pred CCccHHHhHhhcCc-----eEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEec
Q 019322 216 RSDGAVVKGRAYGV-----RSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (343)
Q Consensus 216 ~~~~~~~~a~a~G~-----~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R 268 (343)
...|+.+++++||+ ++++|+ +++++.++++++++. .++|+|||++|+|
T Consensus 481 ~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~~~---~~gp~liev~~~~ 533 (566)
T 2vbi_A 481 KNWDYAGLMEVFNAGEGHGLGLKAT--TPKELTEAIARAKAN---TRGPTLIECQIDR 533 (566)
T ss_dssp CCCCTTTHHHHHHTTTCCCEEEEEC--SHHHHHHHHHHHHHC---CSSCEEEEEECCT
T ss_pred CCCCHHHHHHHcCCCCCCccEEEeC--CHHHHHHHHHHHHhc---CCCcEEEEEEeCc
Confidence 44689999999999 999998 789999998888752 1799999999976
No 37
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=99.63 E-value=3.7e-16 Score=159.58 Aligned_cols=117 Identities=20% Similarity=0.243 Sum_probs=94.6
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEE-EcCCCccccccc------c
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS------D 213 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~------~ 213 (343)
..|+||+++|.|+|+|+|. ++++|||++|||+|++ .+++|++|+++++|+++|| +||+|++..... .
T Consensus 423 ~~g~mG~~l~~A~Gaala~----~~~~vv~~~GDG~~~~--~~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 496 (570)
T 2vbf_A 423 LWGSIGYTFPAALGSQIAD----KESRHLLFIGDGSLQL--TVQELGLSIREKLNPICFIINNDGYTVEREIHGPTQSYN 496 (570)
T ss_dssp TTCCTTTHHHHHHHHHHHC----TTSEEEEEEEHHHHHH--HGGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGG
T ss_pred cchhhhhhHHHHHHHHHhC----CCCcEEEEEcchhhhc--CHHHHHHHHHcCCCCEEEEEECCchHHHHHHhccCCCcc
Confidence 4689999999999999995 5789999999999986 3677999999999876555 555798765322 1
Q ss_pred ccCCccHHHhHhhcCce-----EEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEec
Q 019322 214 QFRSDGAVVKGRAYGVR-----SIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (343)
Q Consensus 214 ~~~~~~~~~~a~a~G~~-----~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R 268 (343)
.....|+.+++++||++ +++|+ +++++.++++++. ++.++|+|||+.|+|
T Consensus 497 ~~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~---~~~~~p~liev~~~~ 551 (570)
T 2vbf_A 497 DIPMWNYSKLPETFGATEDRVVSKIVR--TENEFVSVMKEAQ---ADVNRMYWIELVLEK 551 (570)
T ss_dssp CCCCCCGGGHHHHTTCCTTTEEEEEEC--BHHHHHHHHHHHH---HCTTSEEEEEEECCT
T ss_pred CCCCCCHHHHHHHcCCCcCCcceEEec--CHHHHHHHHHHHH---hcCCCcEEEEEEcCc
Confidence 23446899999999998 89998 7889888888742 236789999999976
No 38
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=99.63 E-value=2.6e-16 Score=160.61 Aligned_cols=115 Identities=19% Similarity=0.198 Sum_probs=95.2
Q ss_pred cccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEE-EcCCCccccccc-----ccc
Q 019322 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS-----DQF 215 (343)
Q Consensus 142 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~-----~~~ 215 (343)
.|+||+++|.|+|+|+|. ++++|||++|||+|+ +.+++|++|.++++|+++|| +||+|++..... ...
T Consensus 421 ~g~mG~~l~~A~G~ala~----~~~~vv~i~GDG~~~--~~~~~l~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 494 (565)
T 2nxw_A 421 YAGMGFGVPAGIGAQCVS----GGKRILTVVGDGAFQ--MTGWELGNCRRLGIDPIVILFNNASWEMLRTFQPESAFNDL 494 (565)
T ss_dssp TCCTTCHHHHHHHHHHHT----TTCCEEEEEEHHHHH--HHGGGGGGHHHHTCCCEEEEEECSBCHHHHHHCTTCGGGBC
T ss_pred cccccccchHHHHHHHhC----CCCcEEEEEechHHH--hhHHHHHHHHHhCCCCEEEEEECCCCcEEeeecccCCCCcC
Confidence 589999999999999995 578999999999998 56788999999999976555 555688754321 123
Q ss_pred CCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcE-EEEEEEec
Q 019322 216 RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI-LIEALTYR 268 (343)
Q Consensus 216 ~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~-lIe~~t~R 268 (343)
...|+.++|++||+++++|+ +++++.++++++++ .++|+ |||+.|+|
T Consensus 495 ~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~~liev~~~~ 542 (565)
T 2nxw_A 495 DDWRFADMAAGMGGDGVRVR--TRAELKAALDKAFA----TRGRFQLIEAMIPR 542 (565)
T ss_dssp CCCCHHHHTGGGTSEEEEEC--BHHHHHHHHHHHHH----CCSSCEEEEEECCT
T ss_pred CCCCHHHHHHHcCCCEEEeC--CHHHHHHHHHHHHh----cCCCeEEEEEEccc
Confidence 45689999999999999998 78999999988875 46898 99999976
No 39
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=99.63 E-value=7.5e-16 Score=157.22 Aligned_cols=116 Identities=18% Similarity=0.153 Sum_probs=95.5
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCC-C-ccccccc--c---
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-W-AISTPIS--D--- 213 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~-~-~~~~~~~--~--- 213 (343)
..|++|+++|.|+|+++| ++++|||++|||+|++ .+++|++|+++++|+++||.||+ | ++..... .
T Consensus 424 ~~g~~G~~l~~AiGaala-----~~~~vv~i~GDGsf~~--~~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 496 (568)
T 2c31_A 424 TWGVMGIGMGYCVAAAAV-----TGKPVIAVEGDSAFGF--SGMELETICRYNLPVTVIIMNNGGIYKGNEADPQPGVIS 496 (568)
T ss_dssp TTTCSSCHHHHHHHHHHH-----HCSCEEEEEEHHHHHT--TGGGHHHHHHTTCCEEEEEEESSBSSCSCCCCSBTTBCC
T ss_pred CCccccccHHHHHHHHhC-----CCCcEEEEEcchHhhc--cHHHHHHHHHhCCCeEEEEEeCchhHHHHHHHhhcCCcc
Confidence 468999999999999998 5789999999999975 36779999999999888877776 3 4432110 0
Q ss_pred --ccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecC
Q 019322 214 --QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 269 (343)
Q Consensus 214 --~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~ 269 (343)
.....|+.++|++||+++++|+ +++++.++++++++ .++|+|||++|+|.
T Consensus 497 ~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~~p~liev~~~~~ 548 (568)
T 2c31_A 497 CTRLTRGRYDMMMEAFGGKGYVAN--TPAELKAALEEAVA----SGKPCLINAMIDPD 548 (568)
T ss_dssp TTBCCCCCHHHHHHTTTCEEEEES--SHHHHHHHHHHHHH----HTSCEEEEEEBCTT
T ss_pred cCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEeccc
Confidence 0345689999999999999998 89999999998875 47899999999874
No 40
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=99.62 E-value=3.1e-16 Score=159.38 Aligned_cols=116 Identities=19% Similarity=0.206 Sum_probs=94.1
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEE-cCCCccccccc------c
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR-NNGWAISTPIS------D 213 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~-nN~~~~~~~~~------~ 213 (343)
..|+||+++|.|+|+|+|. ++++|||++|||+|++ .+++|++|.++++|+++||. ||+|++..... .
T Consensus 406 ~~g~mG~~l~~A~G~a~a~----~~~~vv~~~GDG~~~~--~~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 479 (552)
T 1ovm_A 406 LWGSIGYTLAAAFGAQTAC----PNRRVIVLTGDGAAQL--TIQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRYN 479 (552)
T ss_dssp TTCCTTHHHHHHHHHHHHC----TTSCEEEEEEHHHHHH--HTTHHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGG
T ss_pred hhHhhhhHHHHHHHHHHhC----CCCcEEEEECchHHHh--HHHHHHHHHHhCCCCEEEEEECCCCeEEEeeccCCCCcc
Confidence 3689999999999999995 5789999999999975 46789999999999766655 55688864321 1
Q ss_pred ccCCccHHHhHhhcCc----eEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEec
Q 019322 214 QFRSDGAVVKGRAYGV----RSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (343)
Q Consensus 214 ~~~~~~~~~~a~a~G~----~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R 268 (343)
.....|+.+++++||+ ++++|+ +++++.++++++++ .++|+|||++|++
T Consensus 480 ~~~~~d~~~~a~a~G~~~~~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~ 532 (552)
T 1ovm_A 480 DIALWNWTHIPQALSLDPQSECWRVS--EAEQLADVLEKVAH----HERLSLIEVMLPK 532 (552)
T ss_dssp CCCCCCGGGSTTTSCSSCCEEEEEEC--BHHHHHHHHHHHTT----CSSEEEEEEECCT
T ss_pred cCCCCCHHHHHHHhCCCcCCCEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEcCc
Confidence 2344689999999999 999998 78888888877653 5799999999976
No 41
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=99.61 E-value=1.6e-15 Score=154.50 Aligned_cols=117 Identities=15% Similarity=0.093 Sum_probs=95.2
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCC-C-cccccc-------
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-W-AISTPI------- 211 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~-~-~~~~~~------- 211 (343)
..|++|+++|.|+|+++| ++++|||++|||+|++. +++|++|+++++|+++||.||+ | ++....
T Consensus 419 ~~g~~G~~l~~AiGaa~a-----~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 491 (564)
T 2q28_A 419 TWGVMGIGMGYAIGASVT-----SGSPVVAIEGDSAFGFS--GMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAP 491 (564)
T ss_dssp TTTCTTCHHHHHHHHHHH-----HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEECSBSSCSCCCCTTSSCCC
T ss_pred CCCcccchHHHHHHHhhc-----CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHHHHHHHhccCCc
Confidence 468999999999999997 67899999999999753 4779999999999888777775 3 553211
Q ss_pred cc--ccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCC
Q 019322 212 SD--QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 270 (343)
Q Consensus 212 ~~--~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~ 270 (343)
.. .....|+.+++++||+++++|+ +++++.++++++++ .++|+|||+.|.|..
T Consensus 492 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~~p~liev~~~~~~ 546 (564)
T 2q28_A 492 SPTDLLHHARYDKLMDAFRGVGYNVT--TTDELRHALTTGIQ----SRKPTIINVVIDPAA 546 (564)
T ss_dssp CTTBCCTTCCGGGGGGGGTCEEEEEC--SHHHHHHHHHHHHH----HTSCEEEEEEBCTTS
T ss_pred cccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEecccc
Confidence 00 1124689999999999999998 79999999998875 478999999998754
No 42
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=99.61 E-value=1.3e-15 Score=155.45 Aligned_cols=117 Identities=20% Similarity=0.231 Sum_probs=96.6
Q ss_pred ccccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEE-EEcCCCcccccccc----cc
Q 019322 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI-CRNNGWAISTPISD----QF 215 (343)
Q Consensus 141 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~v-v~nN~~~~~~~~~~----~~ 215 (343)
..|+||+++|.|+|+|+|. ++++|||++|||+|++ .+++|++|.++++|+++| ++||+|++...... ..
T Consensus 411 ~~g~~G~~l~~A~G~ala~----~~~~vv~i~GDGs~~~--~~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 484 (568)
T 2wvg_A 411 QWGHIGWSVPAAFGYAVGA----PERRNILMVGDGSFQL--TAQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNNI 484 (568)
T ss_dssp TTCCTTTHHHHHHHHHHHC----TTSEEEEEEEHHHHHH--HGGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGCC
T ss_pred CcchhhhHHHHHHHHHHhC----CCCcEEEEEcChhHhc--cHHHHHHHHHcCCCcEEEEEECCcceEeeeeccCCCcCC
Confidence 3689999999999999995 5789999999999985 467799999999987555 56667988765431 23
Q ss_pred CCccHHHhHhhcCc---------eEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEec
Q 019322 216 RSDGAVVKGRAYGV---------RSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (343)
Q Consensus 216 ~~~~~~~~a~a~G~---------~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R 268 (343)
...|+.+++++||+ ++++|+ +++++.++++++++. .++|+|||++|+|
T Consensus 485 ~~~d~~~~a~a~G~~~~~~~~~~~~~~v~--~~~el~~al~~a~~~---~~gp~liev~~~~ 541 (568)
T 2wvg_A 485 KNWDYAGLMEVFNGNGGYDSGAGKGLKAK--TGGELAEAIKVALAN---TDGPTLIECFIGR 541 (568)
T ss_dssp CCCCHHHHHHHHHCTTSSSCCCCEEEEES--BHHHHHHHHHHHHHC---CSSCEEEEEECCT
T ss_pred CCCCHHHHHHHhCCCcccccCCcceEEeC--CHHHHHHHHHHHHhc---CCCcEEEEEEcCc
Confidence 44689999999999 999998 789999999888762 2799999999976
No 43
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=99.55 E-value=1.2e-15 Score=156.78 Aligned_cols=114 Identities=18% Similarity=0.066 Sum_probs=91.0
Q ss_pred cccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEE-EcCCCcccccccc-------
Q 019322 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPISD------- 213 (343)
Q Consensus 142 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~~------- 213 (343)
.+++|+++|.|+|+|+|. +++|||++|||+|+++ +++|++|+++++|+++|| +||+|++......
T Consensus 454 ~~~ig~~l~~AiGaala~-----~~~vv~i~GDGsf~~~--~~eL~ta~~~~lp~~ivv~NN~~~~i~~~~~~~q~~~~~ 526 (604)
T 2x7j_A 454 ANGIDGVVSSAMGVCEGT-----KAPVTLVIGDLSFYHD--LNGLLAAKKLGIPLTVILVNNDGGGIFSFLPQASEKTHF 526 (604)
T ss_dssp TCCSSSHHHHHHHHHHHH-----TSCEEEEEEHHHHHHT--GGGGHHHHHHCCCEEEEEEECSSCGGGGGSGGGSCHHHH
T ss_pred cCCcCcHHHHHHHHHhcC-----CCcEEEEEccHHHHhH--HHHHHHhhhcCCCeEEEEEeCCCCcccccCCCCccchhh
Confidence 467899999999999983 6789999999999865 466999999999976665 5558887542210
Q ss_pred -----ccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEec
Q 019322 214 -----QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (343)
Q Consensus 214 -----~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R 268 (343)
.....|+.++|++||+++++|+ +++++.+++++|++ .++|+|||++|+|
T Consensus 527 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~ 580 (604)
T 2x7j_A 527 EDLFGTPTGLDFKHAAALYGGTYSCPA--SWDEFKTAYAPQAD----KPGLHLIEIKTDR 580 (604)
T ss_dssp HHHTTCCCCCCTHHHHHHTTCEEECCS--SHHHHHHHCCCCCS----SCCEEEEEEECCH
T ss_pred HhhccCCCCCCHHHHHHHcCCeEEecC--CHHHHHHHHHHHHh----CCCCEEEEEECCc
Confidence 1134689999999999999998 78888877776653 5899999999854
No 44
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=99.54 E-value=4.7e-15 Score=150.98 Aligned_cols=113 Identities=18% Similarity=0.118 Sum_probs=85.9
Q ss_pred cccccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCC-Ccccccc-------c-
Q 019322 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-WAISTPI-------S- 212 (343)
Q Consensus 142 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~-~~~~~~~-------~- 212 (343)
.|++|. +|.|+|+++| ++++|||++|||+|++. .++|++|.++++|+++||.||+ |++.... .
T Consensus 416 ~g~~G~-l~~A~Gaa~a-----~~~~vv~i~GDGsf~~~--~~eL~ta~~~~lpv~ivv~NN~~~~~~~~~~~~~~~~~~ 487 (556)
T 3hww_A 416 SGIDGL-LSTAAGVQRA-----SGKPTLAIVGDLSALYD--LNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERER 487 (556)
T ss_dssp CCSSSH-HHHHHHHHHH-----HCCCEEEEEEHHHHHHT--GGGHHHHTTCSSCEEEEEEESCC----------------
T ss_pred cccccH-HHHHHHHHhc-----CCCcEEEEEccHHhhhc--chhhHhhcccCCCcEEEEEECCCCCcccCCCCcchhHHH
Confidence 455666 9999999998 37889999999999743 4669999999999887777775 5654321 1
Q ss_pred --cccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEec
Q 019322 213 --DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (343)
Q Consensus 213 --~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R 268 (343)
......|+.++|++||+++++|+ +++++.++++++++ .++|+|||+.|.|
T Consensus 488 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~ 539 (556)
T 3hww_A 488 FYLMPQNVHFEHAAAMFELKYHRPQ--NWQELETAFADAWR----TPTTTVIEMVVND 539 (556)
T ss_dssp -CCCCCCCCSHHHHHHTTCEEECCS--SHHHHHHHHHHHTT----SSSEEEEEEECCS
T ss_pred hccCCCCCCHHHHHHHcCCcEEecC--CHHHHHHHHHHHHh----CCCCEEEEEECCc
Confidence 11235689999999999999998 78888877776654 6899999999855
No 45
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=99.51 E-value=1e-14 Score=149.19 Aligned_cols=111 Identities=16% Similarity=0.052 Sum_probs=79.6
Q ss_pred ccCchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcC-CCcccccc---c--c-----
Q 019322 145 IATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPI---S--D----- 213 (343)
Q Consensus 145 lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~~~---~--~----- 213 (343)
+|+++|.|+|+|+ ++++|||++|||+|++ ..++|++|.++++|+++||.|| +|++.... . .
T Consensus 438 ~~g~l~~AiGaa~------~~~~vv~i~GDGsf~~--~~~eL~ta~~~~l~~~ivv~NN~~~g~~~~~~~~~~~~~~~~~ 509 (578)
T 3lq1_A 438 IDGVVSSALGASV------VFQPMFLLIGDLSFYH--DMNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESL 509 (578)
T ss_dssp SSSHHHHHHHHTT------TSSSEEEEEEHHHHHH--TGGGGHHHHHTTCCEEEEEECCC--------------------
T ss_pred cccHHHHHHHHhc------CCCCEEEEEchHHHHh--hHHHHHhhccCCCCeEEEEEECCcCccccccccccccchhhhh
Confidence 4446999999963 4788999999999974 3567999999999988777776 67775421 0 0
Q ss_pred --ccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecC
Q 019322 214 --QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 269 (343)
Q Consensus 214 --~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~ 269 (343)
.....|+.++|++||+++++|+ +++++.+++++|++ .++|+|||+.|.|.
T Consensus 510 ~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~ 561 (578)
T 3lq1_A 510 FGTSTELDFRFAAAFYDADYHEAK--SVDELEEAIDKASY----HKGLDIIEVKTNRH 561 (578)
T ss_dssp -----CCCTHHHHHHTTCEEEECC--SHHHHHHHHHHHTT----SSSEEEEEEC----
T ss_pred ccCCCCCCHHHHHHHcCCceEecC--CHHHHHHHHHHHHh----CCCCEEEEEECCcc
Confidence 1124589999999999999998 88898888887765 58999999998763
No 46
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.19 E-value=8.4e-11 Score=129.04 Aligned_cols=165 Identities=11% Similarity=0.116 Sum_probs=105.1
Q ss_pred CCeEEEEeCcc-ccCcchHHHHHHHHHhCCCCEEEEEEcCC-Ccccccccc----------------ccCCccHHHhHhh
Q 019322 165 DACAVTYFGDG-GTSEGDFHAALNFSAVTEAPVIFICRNNG-WAISTPISD----------------QFRSDGAVVKGRA 226 (343)
Q Consensus 165 ~~~vv~~~GDG-~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~-~~~~~~~~~----------------~~~~~~~~~~a~a 226 (343)
++.|||+.||| ++++|. .+|.+|.++++||++||.||+ |++...+.. .....|+.++|++
T Consensus 953 ~~~Vv~i~GDG~~~~mg~--~eL~ta~~~~~~v~iiVlnN~~yg~tg~Q~s~~t~~~~~t~~~~~g~~~~~~D~~~iA~a 1030 (1231)
T 2c42_A 953 KKSVWIFGGDGWAYDIGY--GGLDHVLASGEDVNVFVMDTEVYSNTGGQSSKATPTGAVAKFAAAGKRTGKKDLARMVMT 1030 (1231)
T ss_dssp CCEEEEEEEHHHHHTTTH--HHHHHHHHTTCSCEEEEEECSSBTTTTCBCCTTSCTTCCBBTBTTCCSSCCCCHHHHHHT
T ss_pred CCcEEEEeCcHHHHHcch--HHHHHHHHhCCCeEEEEEECHHHHhHHhhhccCCCCCceeeecccCCCCCchhHHHHHHH
Confidence 47899999999 888773 569999999999877777775 555432111 0123589999999
Q ss_pred cCceEEEE-eC-CCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCCCCCCCC------------C----CC-CHHHH
Q 019322 227 YGVRSIRV-DG-NDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST------------K----YR-PVDEI 287 (343)
Q Consensus 227 ~G~~~~~V-dG-~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~dd~~------------~----Yr-~~~e~ 287 (343)
||++++.+ .- .++.++.+++++|++ .+||+||++.+.... |.-..++. . || .++-.
T Consensus 1031 ~G~~~va~~~v~~~~~~l~~al~eAl~----~~GP~lI~v~~~c~~-~~~~~~~~~~~~~~k~av~~~~wpl~~~~p~~~ 1105 (1231)
T 2c42_A 1031 YGYVYVATVSMGYSKQQFLKVLKEAES----FPGPSLVIAYATCIN-QGLRKGMGKSQDVMNTAVKSGYWPLFRYDPRLA 1105 (1231)
T ss_dssp TSSSEEEEECTTTCHHHHHHHHHHHHH----SSSCEEEEEECCCGG-GCBTTCGGGHHHHHHHHHHTTSSCCEEECHHHH
T ss_pred CCCCEEEEEeccCCHHHHHHHHHHHHh----cCCCEEEEEeecCcc-cCCCCChHHHHHHHHhccccCCceeEEeccchh
Confidence 99999864 33 499999999999987 489999999875442 32211111 1 11 11100
Q ss_pred HH----HH-hCCCcHHHHHHHHHHcCCC------CHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019322 288 EW----WR-TTQDPVTRFRKWIESNGWW------NGDIESELRSSVRKQVILVSLTISKY 336 (343)
Q Consensus 288 ~~----~~-~~~dPi~~~~~~L~~~g~~------~~~~~~~i~~~~~~~v~~a~~~a~~~ 336 (343)
+. +. ..+.|-..++++|..++-+ ..++.+++.+++++++++-++..+++
T Consensus 1106 ~~g~~~~~l~~~~~~~~~~~~l~~e~r~~~l~~~~p~~~~~l~~~~~~~~~~~~~~~~~~ 1165 (1231)
T 2c42_A 1106 AQGKNPFQLDSKAPDGSVEEFLMAQNRFAVLDRSFPEDAKRLRAQVAHELDVRFKELEHM 1165 (1231)
T ss_dssp HTTSCSEEECSCSCCSCHHHHHHTBHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCeeecCCCCCcCHHHHHHhhhHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 0122333577777766533 24565666777777777766655543
No 47
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=94.32 E-value=0.15 Score=51.60 Aligned_cols=108 Identities=19% Similarity=0.188 Sum_probs=75.7
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcC
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (343)
.-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|...++|+|+|.-+-....... ..+...|....++.+-
T Consensus 63 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~g~--~~~Q~~d~~~~~~~~~ 134 (590)
T 1ybh_A 63 VFAAEGYARSS---GKPGICIATSGPGATN---LVSGLADALLDSVPLVAITGQVPRRMIGT--DAFQETPIVEVTRSIT 134 (590)
T ss_dssp HHHHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTT--TCTTCCCHHHHHGGGS
T ss_pred HHHHHHHHHHH---CCCEEEEeccCchHHH---HHHHHHHHHhhCCCEEEEeCcCCccccCC--CcccccCHHHHHHHHh
Confidence 34566776653 3445677777888776 45668888889999999987654322211 1122246777888776
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEE
Q 019322 229 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 266 (343)
Q Consensus 229 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~~-gP~lIe~~t 266 (343)
-....+. +++++..++++|+..++.+. ||+.|++-.
T Consensus 135 k~~~~v~--~~~~i~~~l~~A~~~a~~~~~GPV~l~iP~ 171 (590)
T 1ybh_A 135 KHNYLVM--DVEDIPRIIEEAFFLATSGRPGPVLVDVPK 171 (590)
T ss_dssp SEEEECC--CGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred CeEEecC--CHHHHHHHHHHHHHHHhhCCCceEEEEeCc
Confidence 6677776 88899999999998887764 899998743
No 48
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=94.24 E-value=0.16 Score=51.20 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=75.6
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcC
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (343)
.-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|+|+|.-+-........ ..+...|....++.+-
T Consensus 61 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~v~~A~~~~~Pll~itg~~~~~~~~~~-~~~Q~~d~~~~~~~~~ 133 (573)
T 2iht_A 61 GVAADVLARIT---GRPQACWATLGPGMTN---LSTGIATSVLDRSPVIALAAQSESHDIFPN-DTHQCLDSVAIVAPMS 133 (573)
T ss_dssp HHHHHHHHHHH---CSCEEEEECTTHHHHH---HHHHHHHHHHHTCCEEEEEEESCGGGCCTT-TSTTCCCHHHHHGGGS
T ss_pred HHHHHHHHHHH---CCCEEEEEccCchHHH---HHHHHHHHHhhCCCEEEEcccCcccccCCc-CccccCCHHHHHHhHh
Confidence 34566666553 3344566666777775 566788888889999999877654332210 1122236777888777
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEE
Q 019322 229 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 266 (343)
Q Consensus 229 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~~-gP~lIe~~t 266 (343)
-....+. +++++...+.+|+..+..++ ||+.|++-.
T Consensus 134 k~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 170 (573)
T 2iht_A 134 KYAVELQ--RPHEITDLVDSAVNAAMTEPVGPSFISLPV 170 (573)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHTBSSCCCEEEEEEH
T ss_pred hEEEEcC--CHHHHHHHHHHHHHHHhcCCCceEEEEecc
Confidence 7777776 88889999999998888775 999998854
No 49
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=94.18 E-value=0.16 Score=51.10 Aligned_cols=107 Identities=15% Similarity=0.036 Sum_probs=73.3
Q ss_pred HHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCc
Q 019322 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (343)
Q Consensus 150 p~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (343)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|+|+|.-+-........ .+...|....++.+--
T Consensus 62 ~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~l~~A~~~~vPll~itg~~~~~~~~~~--~~Q~~d~~~~~~~~tk 133 (566)
T 1ozh_A 62 FMAAAVGRIT---GKAGVALVTSGPGCSN---LITGMATANSEGDPVVALGGAVKRADKAKQ--VHQSMDTVAMFSPVTK 133 (566)
T ss_dssp HHHHHHHHHH---SSCEEEEECSTHHHHT---THHHHHHHHHHTCCEEEEEEECCTTTC--------CCCHHHHHGGGCS
T ss_pred HHHHHHHHHH---CCCEEEEEccChHHHH---HHHHHHHHHhcCCCEEEEeCCCccccCCCC--cccccCHHHHHHHHhh
Confidence 3566666553 3344566666888886 456677888889999999877643332211 1222467778888877
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEE
Q 019322 230 RSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 266 (343)
Q Consensus 230 ~~~~VdG~d~~~v~~a~~~a~~~~r~~~-gP~lIe~~t 266 (343)
....+. +++++...+++|+..+..++ ||+.|++-.
T Consensus 134 ~~~~v~--~~~~~~~~i~~A~~~A~~~r~GPV~l~iP~ 169 (566)
T 1ozh_A 134 YAIEVT--APDALAEVVSNAFRAAEQGRPGSAFVSLPQ 169 (566)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred eEEEcC--CHHHHHHHHHHHHHHHhcCCCCeEEEEeCh
Confidence 777776 88889899999988887764 999998744
No 50
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=94.16 E-value=0.27 Score=49.75 Aligned_cols=107 Identities=17% Similarity=0.123 Sum_probs=73.4
Q ss_pred HHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCc
Q 019322 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (343)
Q Consensus 150 p~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (343)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|+|+|.-+-......... .+...|... ++.+--
T Consensus 57 ~~A~GyAr~t---g~p~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~~~~~-~~Q~~d~~~-~~~~tk 128 (589)
T 2pgn_A 57 WMVNGYNYVK---DRSAAVGAWHCVGNLL---LHAAMQEARTGRIPAVHIGLNSDGRLAGRSE-AAQQVPWQS-FTPIAR 128 (589)
T ss_dssp HHHHHHHHHH---TSCCEEEEEEGGGGGG---CHHHHHHHHHTTCCEEEEEEESCGGGTTCTT-CSSCCCGGG-GTTTSS
T ss_pred HHHHHHHHHH---CCCEEEEEecCchHHH---HHHHHHHHHhcCCCEEEEecCCcccccCCCC-cccccChhh-ccccEE
Confidence 3566666553 4456788888999886 4566888889999999998776433221110 111224555 666655
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEE
Q 019322 230 RSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 266 (343)
Q Consensus 230 ~~~~VdG~d~~~v~~a~~~a~~~~r~~~-gP~lIe~~t 266 (343)
....+. +++++...+.+|+..+..++ ||+.|++-.
T Consensus 129 ~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 164 (589)
T 2pgn_A 129 STQRVE--RLDKVGEAIHEAFRVAEGHPAGPAYVDIPF 164 (589)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHTSSSCCEEEEEEET
T ss_pred EEeecC--CHHHHHHHHHHHHHHHhcCCCccEEEEeCH
Confidence 666666 88889999999998887766 999998743
No 51
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=94.10 E-value=0.2 Score=50.34 Aligned_cols=108 Identities=19% Similarity=0.115 Sum_probs=74.8
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCC-ccHHHhHhhc
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS-DGAVVKGRAY 227 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~-~~~~~~a~a~ 227 (343)
.-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|...++|+|+|.-+-........ .+.. .|....++.+
T Consensus 54 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~l~~A~~~~~Pll~itg~~~~~~~~~~--~~Q~~~d~~~~~~~~ 125 (563)
T 2uz1_A 54 GHAAEGYARAG---AKLGVALVTAGGGFTN---AVTPIANAWLDRTPVLFLTGSGALRDDETN--TLQAGIDQVAMAAPI 125 (563)
T ss_dssp HHHHHHHHHHH---TSCEEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTSC--CTTCCCCHHHHHGGG
T ss_pred HHHHHHHHHHh---CCCEEEEEccCccHHH---HHHHHHHHHhcCCCEEEEeCCCCcccCCch--hhhhhccHHHHhhhh
Confidence 34566766653 3344566666778776 345677788889999999877654332211 1222 4677788888
Q ss_pred CceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEE
Q 019322 228 GVRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 266 (343)
Q Consensus 228 G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~-gP~lIe~~t 266 (343)
--....+. +++++...+.+|+..+..++ ||+.|++-.
T Consensus 126 tk~~~~v~--~~~~~~~~l~~A~~~a~~~~~GPV~l~iP~ 163 (563)
T 2uz1_A 126 TKWAHRVM--ATEHIPRLVMQAIRAALSAPRGPVLLDLPW 163 (563)
T ss_dssp CSEEEECC--CGGGHHHHHHHHHHHHHSSSCCCEEEEEEH
T ss_pred hceEEEcC--CHHHHHHHHHHHHHHhcCCCCceEEEEeCH
Confidence 77777776 88889999999988887765 999998744
No 52
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=94.03 E-value=0.078 Score=51.20 Aligned_cols=110 Identities=13% Similarity=0.134 Sum_probs=62.9
Q ss_pred CchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcccc-ccccccCCccHHHhHh
Q 019322 147 TQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST-PISDQFRSDGAVVKGR 225 (343)
Q Consensus 147 ~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~-~~~~~~~~~~~~~~a~ 225 (343)
..+.+|+|+|++- .+.++...|.|-.. ..+.|..++..++|+|+++-+....... +.....+ ..+..+..
T Consensus 75 ~a~~~a~Gaa~aG-----~r~~~~ts~~G~~~---~~d~l~~aa~~~~P~Vi~~~~~~~~~~g~~~~~~~s-d~~~~~~~ 145 (395)
T 1yd7_A 75 ASIAAAIGASWAG-----AKAMTATSGPGFSL---MQENIGYAVMTETPVVIVDVQRSGPSTGQPTLPAQG-DIMQAIWG 145 (395)
T ss_dssp HHHHHHHHHHHTT-----CCEEEEEETTHHHH---HTTTCC----CCCCEEEEEEC------------------------
T ss_pred HHHHHHHHHHHhC-----CcEEEEeCchHHHH---HHHHHHHHHhcCCCEEEEEeeCCCCCCCCCcccchh-HHHHHHhc
Confidence 3466777887763 45677777888763 3455666777889999888765432211 1111110 11122222
Q ss_pred ---hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEe
Q 019322 226 ---AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 267 (343)
Q Consensus 226 ---a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 267 (343)
.+|++++... ++.+.+..+..|++.+++.+.|+++....+
T Consensus 146 ~~g~~g~~vl~p~--~~qea~~l~~~A~~lA~~~~~PVi~~~~~~ 188 (395)
T 1yd7_A 146 THGDHSLIVLSPS--TVQEAFDFTIRAFNLSEKYRTPVILLTDAE 188 (395)
T ss_dssp ---CCCCEEECCC--SHHHHHHHHHHHHHHHHHHTSEEEEEECHH
T ss_pred cCCCcceEEEeCC--CHHHHHHHHHHHHHHHHHHCCCEEEEcchh
Confidence 3468877766 899999999999988877789999977553
No 53
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=93.53 E-value=0.27 Score=49.40 Aligned_cols=109 Identities=19% Similarity=0.114 Sum_probs=69.9
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcccccc---cccc---CCccHHH
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI---SDQF---RSDGAVV 222 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~---~~~~---~~~~~~~ 222 (343)
.-+|.|.|.+. + -.++++..|=|+++ ..-++..|...++|+|+|+-+-........ .... ...|...
T Consensus 54 a~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~ 126 (566)
T 2vbi_A 54 GFSAEGYARSN---G-AAAAVVTFSVGAIS---AMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLE 126 (566)
T ss_dssp HHHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCTHHHH
T ss_pred HHHHHHHHhhc---C-CeEEEEeCCCCHHH---HHHHHHHHHhhCCCEEEEECCCChHHhccCceeeeeccCcchHHHHH
Confidence 34566766653 3 34455555777775 556677788899999999877543221110 0100 1125677
Q ss_pred hHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEE
Q 019322 223 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (343)
Q Consensus 223 ~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t 266 (343)
.++.+--....+. +++++...+.+|+..+..+.||+.|++-.
T Consensus 127 ~~~~~tk~~~~v~--~~~~~~~~l~~A~~~a~~~~GPV~l~iP~ 168 (566)
T 2vbi_A 127 MARQVTCAAESIT--DAHSAPAKIDHVIRTALRERKPAYLDIAC 168 (566)
T ss_dssp HHHTTCSEEEEEC--SSSSHHHHHHHHHHHHHHHTCCEEEEEET
T ss_pred HHhhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 8888877777786 66666677777776666677999998854
No 54
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=93.53 E-value=0.32 Score=48.92 Aligned_cols=109 Identities=17% Similarity=0.094 Sum_probs=72.6
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcccccc---cccc---CCccHHH
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI---SDQF---RSDGAVV 222 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~---~~~~---~~~~~~~ 222 (343)
.-+|.|.|.+. + -.++++..|=|+++ ..-++..|...++|+|+|.-+-........ .... ...|...
T Consensus 54 a~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~ 126 (568)
T 2wvg_A 54 GFSAEGYARAK---G-AAAAVVTYSVGALS---AFDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLE 126 (568)
T ss_dssp HHHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHH
T ss_pred HHHHHHHHHhh---C-CeEEEEeCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCChhHhccCcceeeeccccchHHHHH
Confidence 34566776653 4 44566666777775 556677888899999999877643321110 0000 1125677
Q ss_pred hHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEE
Q 019322 223 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (343)
Q Consensus 223 ~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t 266 (343)
.++.+--....+. +++++...+.+|+..+..+.||+.|++-.
T Consensus 127 ~~~~~tk~~~~v~--~~~~~~~~l~~A~~~A~~~~GPV~l~iP~ 168 (568)
T 2wvg_A 127 MAKNITAAAEAIY--TPEEAPAKIDHVIKTALREKKPVYLEIAC 168 (568)
T ss_dssp HHTTSCSCEEEEC--SGGGHHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred HHHhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 7877776778887 77777778888877777778999998854
No 55
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=93.33 E-value=0.29 Score=50.51 Aligned_cols=107 Identities=18% Similarity=0.159 Sum_probs=74.8
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcC
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (343)
.-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|+|+|+-+-....... ..+...|...+++.+-
T Consensus 133 a~aAdGyAr~t---Gkpgvv~~TsGpG~~N---~~~gia~A~~d~vPllvItG~~~~~~~g~--~a~Q~~Dq~~i~~~~t 204 (677)
T 1t9b_A 133 GHMAEGYARAS---GKPGVVLVTSGPGATN---VVTPMADAFADGIPMVVFTGQVPTSAIGT--DAFQEADVVGISRSCT 204 (677)
T ss_dssp HHHHHHHHHHH---SSCEEEEECSTHHHHT---THHHHHHHHHHTCCEEEEEEECCTTTTTS--CCTTCCCHHHHTGGGS
T ss_pred HHHHHHHHHHH---CCCEEEEECCChHHHH---HHHHHHHHHHcCCCEEEEeCCCChhhcCC--CCccccCHHHHhhhhe
Confidence 34566776653 4445677777888886 45567788888999999987654332211 1122235667777776
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhcc-CCcEEEEEE
Q 019322 229 VRSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEAL 265 (343)
Q Consensus 229 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~-~gP~lIe~~ 265 (343)
-....|. +++++...+.+|+..+..+ .||+.|++-
T Consensus 205 k~~~~v~--~~~~i~~~i~~A~~~A~~grpGPV~l~lP 240 (677)
T 1t9b_A 205 KWNVMVK--SVEELPLRINEAFEIATSGRPGPVLVDLP 240 (677)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEE
T ss_pred eEEEEcC--CHHHHHHHHHHHHHHHhhCCCceEEEEcC
Confidence 6677776 8889999999999888876 589999885
No 56
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=93.27 E-value=0.28 Score=49.18 Aligned_cols=106 Identities=14% Similarity=-0.033 Sum_probs=72.0
Q ss_pred HHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCc
Q 019322 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (343)
Q Consensus 150 p~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (343)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|+|+|.-+-....... ..+...|....++.+--
T Consensus 55 ~~A~GyAr~t---g~~~v~~~TsGpG~~N---~~~gi~~A~~~~vPvl~itg~~~~~~~~~--~~~Q~~d~~~~~~~~tk 126 (549)
T 3eya_A 55 FAAGAEAQLS---GELAVCAGSCGPGNLH---LINGLFDCHRNHVPVLAIAAHIPSSEIGS--GYFQETHPQELFRECSH 126 (549)
T ss_dssp HHHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEESCGGGTTS--CCTTCCCHHHHTSTTCS
T ss_pred HHHHHHHHHh---CCCEEEEeCCCCcHhh---hHHHHHHHHhhCCCEEEEeCCCchhhcCC--CCCCccCHHHHHhhhhh
Confidence 3566666553 3445666777888886 34668888899999999986543221111 11222356677777766
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 019322 230 RSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 265 (343)
Q Consensus 230 ~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~ 265 (343)
....+. +++++...+.+|+..+....||+.|++-
T Consensus 127 ~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP 160 (549)
T 3eya_A 127 YCELVS--SPEQIPQVLAIAMRKAVLNRGVSVVVLP 160 (549)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred eEEEeC--CHHHHHHHHHHHHHHHhhCCCCEEEEeC
Confidence 667776 7888888888888877777899999874
No 57
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=93.24 E-value=0.28 Score=50.07 Aligned_cols=104 Identities=12% Similarity=0.049 Sum_probs=69.1
Q ss_pred CchHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcc-ccccccccCCccHHHhHh
Q 019322 147 TQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI-STPISDQFRSDGAVVKGR 225 (343)
Q Consensus 147 ~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~-~~~~~~~~~~~~~~~~a~ 225 (343)
..+++|+|+|++ .-++++.++++... =.+-+.++.++..++|+++++.+.++.- ..++..+ ..+++-...
T Consensus 372 ~~~~~a~G~A~~-----G~rp~~~~~~~F~~--~a~dqi~~~~a~~~~pvv~~~~~~g~~g~~G~tH~~--~~d~~~~~~ 442 (621)
T 2o1s_A 372 HAVTFAAGLAIG-----GYKPIVAIYSTFLQ--RAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQG--AFDLSYLRC 442 (621)
T ss_dssp HHHHHHHHHHHT-----TCEEEEEEETTGGG--GGHHHHHHTTTTTTCCCEEEEESCBCCCTTCGGGCB--CSHHHHTTT
T ss_pred HHHHHHHHHHHC-----CCEEEEEehHhHHH--HHHHHHHHHHHhcCCCEEEEEECCccCCCCCCccCc--hHHHHHHhc
Confidence 346678888875 24667777877643 2333456778889999999998877621 3343332 234443333
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 019322 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (343)
Q Consensus 226 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~ 264 (343)
--|+.++.-. |+.++...++.|++. .++|++|-.
T Consensus 443 iP~l~v~~P~--d~~e~~~~l~~a~~~---~~~Pv~i~~ 476 (621)
T 2o1s_A 443 IPEMVIMTPS--DENECRQMLYTGYHY---NDGPSAVRY 476 (621)
T ss_dssp STTCEEECCS--SHHHHHHHHHHHHHC---CSSCEEEEC
T ss_pred CCCCEEEecC--CHHHHHHHHHHHHHc---CCCCEEEEe
Confidence 3388777655 899999999998873 378998854
No 58
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=93.08 E-value=0.26 Score=49.54 Aligned_cols=108 Identities=19% Similarity=0.142 Sum_probs=67.0
Q ss_pred HHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccc---cccCCcc-HHHhHh
Q 019322 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS---DQFRSDG-AVVKGR 225 (343)
Q Consensus 150 p~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~---~~~~~~~-~~~~a~ 225 (343)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|...++|+|+|.-+-......... .+....| ....++
T Consensus 73 ~~A~GyAr~t---gkp~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~~~~~q~~d~q~~~~~ 146 (565)
T 2nxw_A 73 FAADAAARYS---STLGVAAVTYGAGAFN---MVNAVAGAYAEKSPVVVISGAPGTTEGNAGLLLHHQGRTLDTQFQVFK 146 (565)
T ss_dssp HHHHHHHHHH---TSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEECCTTCC--CCCC-------CHHHHHHT
T ss_pred HHHHHHHHHh---CCCeEEEECCCCCHHH---HHHHHHHHHhhCCCEEEEeCCCChhhhccCcceeeeccchhhHHHHHH
Confidence 3566776653 3344566666888776 4566778888999999998774332211100 0111122 556777
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 019322 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 265 (343)
Q Consensus 226 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~ 265 (343)
.+--....+. +++++...+.+|+..+..+.||+.|++-
T Consensus 147 ~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP 184 (565)
T 2nxw_A 147 EITVAQARLD--DPAKAPAEIARVLGAARAQSRPVYLEIP 184 (565)
T ss_dssp TSCSCEEECC--CTTTHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred hhheEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 7766667775 6666666777777666656799999986
No 59
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=92.95 E-value=0.23 Score=49.92 Aligned_cols=108 Identities=16% Similarity=0.176 Sum_probs=72.1
Q ss_pred HHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCc
Q 019322 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (343)
Q Consensus 150 p~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (343)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|+|+|.-+-...........+...|....++.+--
T Consensus 59 ~~A~Gyar~t---g~pgv~~~TsGpG~~N---~~~gi~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk 132 (564)
T 2q28_A 59 YAAAASGFLT---QKPGICLTVSAPGFLN---GLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAK 132 (564)
T ss_dssp HHHHHHHHHH---SSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTSCCTTCCCHHHHHGGGSS
T ss_pred HHHHHHHHHh---CCCEEEEEccCchHHH---HHHHHHHHHhcCCCEEEEeCCCCccccCCCCCccccccHHHHHHHhhh
Confidence 3566666653 3344666666777775 556777888899999999876543221100111222356677777777
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhcc-CCcEEEEEE
Q 019322 230 RSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEAL 265 (343)
Q Consensus 230 ~~~~VdG~d~~~v~~a~~~a~~~~r~~-~gP~lIe~~ 265 (343)
....|. +++++...+.+|+..+..+ .||+.|++-
T Consensus 133 ~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP 167 (564)
T 2q28_A 133 AAFRVN--QPQDLGIALARAIRVSVSGRPGGVYLDLP 167 (564)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEE
T ss_pred eeeecC--CHHHHHHHHHHHHHHHhcCCCceEEEEcC
Confidence 777776 7888888888998888764 599999874
No 60
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=92.90 E-value=0.26 Score=49.92 Aligned_cols=104 Identities=20% Similarity=0.054 Sum_probs=70.8
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcC
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (343)
.-+|.|.|.+. +.-.++++..|=|.++ ..-++..|...++|+|+|.-+-........ .+...|....++.+-
T Consensus 56 a~~A~GyAr~t---gk~~v~~~tsGpG~~N---~~~gl~~A~~~~vPll~Itg~~p~~~~g~~--~~Q~~d~~~~~~~~t 127 (590)
T 1v5e_A 56 AMAAVMQSKFG---GNLGVTVGSGGPGASH---LINGLYDAAMDNIPVVAILGSRPQRELNMD--AFQELNQNPMYDHIA 127 (590)
T ss_dssp HHHHHHHHHTT---CCCCEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTTT--CTTCCCCHHHHHTTC
T ss_pred HHHHHHHHHHH---CCCEEEEeCcChHHHH---HHHHHHHHHhcCCCEEEEcCCCCcccCCCC--cccccCHHHHHHhhc
Confidence 44566766653 3344666666878776 345677788889999999877654322211 112235667777776
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEE
Q 019322 229 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILI 262 (343)
Q Consensus 229 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~~-gP~lI 262 (343)
-....+. +++++...+++|++.+..++ ||+.|
T Consensus 128 k~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l 160 (590)
T 1v5e_A 128 VYNRRVA--YAEQLPKLVDEAARMAIAKRGVAVLE 160 (590)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHHTTSEEEEE
T ss_pred cEEEEeC--CHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 6677776 88888889999988887776 89999
No 61
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=92.84 E-value=0.54 Score=48.44 Aligned_cols=101 Identities=11% Similarity=0.015 Sum_probs=66.4
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcc--ccccccccCCccHHHhHhh
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 226 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~a 226 (343)
+++|.|+|+. +.-+++++.+...+. ..++++..++..++|+++++.+.+++. .+++.. +..+++-...-
T Consensus 415 v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~~~G~dG~tHq--~~edla~lr~i 485 (669)
T 2r8o_A 415 TAIANGISLH----GGFLPYTSTFLMFVE---YARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQ--PVEQVASLRVT 485 (669)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---TTHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTC--CSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCeEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCCcCcCCCCCccC--CHHHHHHhcCC
Confidence 5677777765 223455555544432 346778889999999999998887764 344432 23444443333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 019322 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (343)
Q Consensus 227 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe 263 (343)
-|+.++.-- |+.++..+++.|++. .++|++|-
T Consensus 486 P~l~V~~Pa--d~~E~~~~l~~a~~~---~~~Pv~i~ 517 (669)
T 2r8o_A 486 PNMSTWRPC--DQVESAVAWKYGVER---QDGPTALI 517 (669)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHHC---SSSCEEEE
T ss_pred CCCEEEecC--CHHHHHHHHHHHHHh---CCCcEEEE
Confidence 376666544 899999999998873 36899984
No 62
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=92.76 E-value=0.48 Score=48.65 Aligned_cols=103 Identities=15% Similarity=0.081 Sum_probs=67.7
Q ss_pred chHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcc--ccccccccCCccHHHhHh
Q 019322 148 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGR 225 (343)
Q Consensus 148 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~ 225 (343)
.+++|.|+|+. |.-++++..+.=.+. ..++++..++..++|+++++.+.+++. .+++. .+..+++-...
T Consensus 409 ~~~~a~GlA~~----Gg~~P~~~t~~~F~~---~~~~air~~a~~~lpvv~~~t~~g~g~G~dG~tH--q~~edla~lr~ 479 (651)
T 2e6k_A 409 MGAILNGLNLH----GGYRAYGGTFLVFSD---YMRPAIRLAALMGVPTVFVFTHDSIALGEDGPTH--QPVEHLMSLRA 479 (651)
T ss_dssp HHHHHHHHHHH----SSCEEEEEEEGGGGG---GSHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHT
T ss_pred HHHHHHHHHHc----CCCEEEEEeHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCcCcc--ccHHHHHHhcC
Confidence 35678888775 223555655532221 346778889999999999998888664 34443 23344444333
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 019322 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (343)
Q Consensus 226 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~ 264 (343)
--|+.++.-- |+.++..+++.|++. .++|++|-.
T Consensus 480 iP~l~V~~Pa--d~~E~~~~l~~A~~~---~~~Pv~i~~ 513 (651)
T 2e6k_A 480 MPNLFVIRPA--DAYETFYAWLVALRR---KEGPTALVL 513 (651)
T ss_dssp STTCEEECCS--SHHHHHHHHHHHHHC---CSSCEEEEC
T ss_pred CCCcEEEecC--CHHHHHHHHHHHHHc---CCCCEEEEE
Confidence 3377766655 899999999998873 368998864
No 63
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=92.73 E-value=0.28 Score=49.81 Aligned_cols=106 Identities=15% Similarity=0.064 Sum_probs=67.6
Q ss_pred HHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCc
Q 019322 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (343)
Q Consensus 150 p~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (343)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|+|+|.-+-....... ..+...|....++.+--
T Consensus 64 ~aA~GyAr~t---g~~gv~~~TsGpG~~N---~~~gia~A~~~~vPvl~itG~~~~~~~~~--~~~Q~~d~~~~~~~~tk 135 (603)
T 4feg_A 64 MAAAADAKLT---GKIGVCFGSAGPGGTH---LMNGLYDAREDHVPVLALIGQFGTTGMNM--DTFQEMNENPIYADVAD 135 (603)
T ss_dssp HHHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEECCTTTTTS--CCTTCCCCGGGGTTTCS
T ss_pred HHHHHHHHHh---CCceEEEecCCchHHH---HHHHHHHHHHcCCCEEEEecCCcccccCC--CccccccHHHHhhhhce
Confidence 3566666553 3445666777888886 34568888889999999986543221111 11112245566666666
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 019322 230 RSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 265 (343)
Q Consensus 230 ~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~ 265 (343)
....|. +++++...+.+|+..+....||+.|++-
T Consensus 136 ~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP 169 (603)
T 4feg_A 136 YNVTAV--NAATLPHVIDEAIRRAYAHQGVAVVQIP 169 (603)
T ss_dssp EEEECC--CSTTHHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred EEEEcC--CHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 666665 6666777777777666656899999874
No 64
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=92.73 E-value=0.62 Score=47.98 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=67.3
Q ss_pred chHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcc--ccccccccCCccHHHhHh
Q 019322 148 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGR 225 (343)
Q Consensus 148 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~ 225 (343)
.+++|+|+|+. +.-++++..+.+-.. ...+.+.+++..++|++++....+++. ++++.. +..+++-...
T Consensus 415 ~v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~THq--~~ed~a~lr~ 485 (663)
T 3kom_A 415 MAAIMNGLSLY----GGIKPYGGTFLVFSD---YSRNAIRMSALMKQPVVHVMSHDSIGLGEDGPTHQ--PIEHVPSLRL 485 (663)
T ss_dssp HHHHHHHHHHH----SSCEEEEEEEGGGHH---HHHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTC--CSSHHHHHHT
T ss_pred HHHHHHHHHHc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCCcC--CHHHHHHHhc
Confidence 45678888875 234556666655442 345778888999999999987777653 344432 2344444333
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 019322 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (343)
Q Consensus 226 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe 263 (343)
--|+.++.-. |+.++..+++.|+++ .++|++|-
T Consensus 486 iPnl~V~~Pa--d~~e~~~~l~~A~~~---~~~Pv~ir 518 (663)
T 3kom_A 486 IPNLSVWRPA--DTIETMIAWKEAVKS---KDTPSVMV 518 (663)
T ss_dssp STTCEEECCC--SHHHHHHHHHHHHHC---SSCCEEEE
T ss_pred CCCcEEEeeC--CHHHHHHHHHHHHHh---CCCCEEEE
Confidence 3366666544 889999999988862 47999984
No 65
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=92.61 E-value=0.24 Score=49.82 Aligned_cols=108 Identities=15% Similarity=0.107 Sum_probs=71.5
Q ss_pred HHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCc
Q 019322 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (343)
Q Consensus 150 p~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (343)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|+|+|.-+-...........+...|....++.+--
T Consensus 61 ~~A~GyAr~t---g~pgv~~~TsGpG~~N---~~~~i~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk 134 (568)
T 2c31_A 61 YAASIAGYIE---GKPGVCLTVSAPGFLN---GVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEEMDQMNVARPHCK 134 (568)
T ss_dssp HHHHHHHHHH---SSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTCCCHHHHSGGGSS
T ss_pred HHHHHHHHHh---CCCEEEEEcCCccHHH---HHHHHHHHHhcCCCEEEEccCCCccccCCCCCcccccCHHHHHHhhhh
Confidence 3466666553 3344666667777775 566788888899999999876543221100111222356667777766
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhc-cCCcEEEEEE
Q 019322 230 RSIRVDGNDALAIYSAVHAAREMAIG-EGRPILIEAL 265 (343)
Q Consensus 230 ~~~~VdG~d~~~v~~a~~~a~~~~r~-~~gP~lIe~~ 265 (343)
....+. +++++...+.+|+..+.. ..||+.|++-
T Consensus 135 ~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP 169 (568)
T 2c31_A 135 ASFRIN--SIKDIPIGIARAVRTAVSGRPGGVYVDLP 169 (568)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEE
T ss_pred eeeecC--CHHHHHHHHHHHHHHhcCCCCceEEEeCC
Confidence 677776 788888888899888876 3589999774
No 66
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=92.33 E-value=0.62 Score=47.51 Aligned_cols=101 Identities=17% Similarity=0.119 Sum_probs=66.0
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcc--ccccccccCCccHHHhHhh
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 226 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~a 226 (343)
+++|+|+|++ |..+++++.++++.. ..++.+..++..++|+++++.+.+++. .+++.. +..+++-...-
T Consensus 368 v~~a~G~A~~----G~~~~~~~~f~~Fl~---~a~dqi~~~a~~~~~v~~v~~~~g~~~G~dG~tH~--~~ed~a~l~~i 438 (616)
T 3mos_A 368 VSIAVGCATR----NRTVPFCSTFAAFFT---RAFDQIRMAAISESNINLCGSHCGVSIGEDGPSQM--ALEDLAMFRSV 438 (616)
T ss_dssp HHHHHHHHGG----GCCEEEEEEEGGGGG---GGHHHHHHHHHTTCCEEEEEESBSGGGCTTCGGGC--BSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCCEEEEehHHHHH---HHHHHHHHHHHhCCCeEEEEECCCccccCCCCccc--CHHHHHHhcCC
Confidence 5566677665 333466678888875 467778888899999999988777643 333322 33444433333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 019322 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (343)
Q Consensus 227 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~ 264 (343)
-|+.++.-. |+.++..+++.|.+ .++|++|..
T Consensus 439 P~l~V~~P~--d~~e~~~~l~~a~~----~~gp~~ir~ 470 (616)
T 3mos_A 439 PTSTVFYPS--DGVATEKAVELAAN----TKGICFIRT 470 (616)
T ss_dssp TTEEEECCC--SHHHHHHHHHHHHT----CCSEEEEEC
T ss_pred CCCEEEecC--CHHHHHHHHHHHHh----cCCCEEEEE
Confidence 366555433 89999888887775 378987743
No 67
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=92.04 E-value=0.57 Score=48.36 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=65.5
Q ss_pred hHHHHHHHHhcccccCCC-eEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcc--ccccccccCCccHHHhHh
Q 019322 149 LPHAVGAAYALKMDRKDA-CAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGR 225 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~-~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~ 225 (343)
+++|.|+|+. |.-+ +++..+.+-+. ..++++..++..++|+++++...+++. .+++.. +..+++-...
T Consensus 422 vg~a~GlA~~----Gg~~~P~~~~f~~F~~---~~~~air~~a~~~lpvv~v~t~~g~g~G~dG~tHq--~~edla~lr~ 492 (680)
T 1gpu_A 422 GAIMNGISAF----GANYKPYGGTFLNFVS---YAAGAVRLSALSGHPVIWVATHDSIGVGEDGPTHQ--PIETLAHFRS 492 (680)
T ss_dssp HHHHHHHHHH----CTTCEEEEEEEHHHHG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTC--CSSHHHHHHT
T ss_pred HHHHHHHHhc----CCCceEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCccC--CHHHHHHhcC
Confidence 4577888775 3234 55555533322 346778889999999999998777654 344442 2344444333
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 019322 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (343)
Q Consensus 226 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe 263 (343)
--|+.++.-- |+.++..+++.|++. .++|++|-
T Consensus 493 iP~l~V~~Pa--d~~e~~~~l~~A~~~---~~~Pv~i~ 525 (680)
T 1gpu_A 493 LPNIQVWRPA--DGNEVSAAYKNSLES---KHTPSIIA 525 (680)
T ss_dssp SSSCEEECCC--SHHHHHHHHHHHHHC---SSCCEEEE
T ss_pred CCCCEEEecC--CHHHHHHHHHHHHHh---CCCcEEEE
Confidence 3366665544 899999999998873 37899984
No 68
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=91.83 E-value=0.98 Score=46.22 Aligned_cols=102 Identities=14% Similarity=0.003 Sum_probs=67.5
Q ss_pred chHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcc--ccccccccCCccHHHhHh
Q 019322 148 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGR 225 (343)
Q Consensus 148 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~ 225 (343)
.+++|.|+|+. +.-++++.++.+ |.+ ..++.+.+++..++||+++....+++. ++++.. +..+++-...
T Consensus 394 ~v~~a~GlA~~----gG~~P~~~~f~~--F~~-~~~~~ir~~a~~~~pv~~~~t~~g~g~G~dG~THq--~~ed~a~lr~ 464 (632)
T 3l84_A 394 MAAINNAFARY----GIFLPFSATFFI--FSE-YLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQ--PIEQLSTFRA 464 (632)
T ss_dssp HHHHHHHHHHH----SSCEEEEEEEGG--GHH-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGS--CSSHHHHHHH
T ss_pred HHHHHHHHHHc----CCCEEEEEecHH--HHH-HHHHHHHHHhccCCCEEEEEECCCcCCCCCCCCCC--CHhHHHHHhc
Confidence 35678888875 233456665543 322 356778888899999999998777653 444442 3344444333
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 019322 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (343)
Q Consensus 226 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~ 264 (343)
--|+.++.-- |+.++..+++.|++ .++|++|-.
T Consensus 465 iP~l~V~~P~--d~~e~~~~l~~A~~----~~~Pv~ir~ 497 (632)
T 3l84_A 465 MPNFLTFRPA--DGVENVKAWQIALN----ADIPSAFVL 497 (632)
T ss_dssp SSSCEEECCS--SHHHHHHHHHHHHH----CSSCEEEEC
T ss_pred CCCCEEEecC--CHHHHHHHHHHHHh----CCCCEEEEE
Confidence 3377666544 89999999999887 479998853
No 69
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=91.64 E-value=0.38 Score=49.17 Aligned_cols=102 Identities=17% Similarity=0.103 Sum_probs=66.7
Q ss_pred chHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCc-cccccccccCCccHHHhHhh
Q 019322 148 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA-ISTPISDQFRSDGAVVKGRA 226 (343)
Q Consensus 148 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~-~~~~~~~~~~~~~~~~~a~a 226 (343)
.+++|+|+|++ .-++++.++.+... =.+-+.++.++..++|+++++.+.++. -..++... ..+++-...-
T Consensus 376 ~~~~a~G~A~~-----G~rp~~~~~~~F~~--~a~dqi~~~~a~~~~pvv~~~~~~g~~g~dG~tH~~--~~d~a~~r~i 446 (629)
T 2o1x_A 376 AVTTAAGMALQ-----GMRPVVAIYSTFLQ--RAYDQVLHDVAIEHLNVTFCIDRAGIVGADGATHNG--VFDLSFLRSI 446 (629)
T ss_dssp HHHHHHHHHHT-----TCEEEEEEEHHHHG--GGHHHHHHTTTTTTCCCEEEEESBBCCCTTCTTTCB--CSHHHHTTTS
T ss_pred HHHHHHHHHHc-----CCEEEEEecHHHHH--HHHHHHHHHHhhcCCCEEEEEECCccCCCCCcccCc--cHHHHHHHcc
Confidence 45678888875 24566666766542 233344677889999999999877752 22333322 2343333332
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 019322 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (343)
Q Consensus 227 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~ 264 (343)
-|+.++.-. |+.++...++.|++. ++|++|-.
T Consensus 447 P~l~v~~P~--d~~e~~~~~~~a~~~----~~Pv~i~~ 478 (629)
T 2o1x_A 447 PGVRIGLPK--DAAELRGMLKYAQTH----DGPFAIRY 478 (629)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHHS----SSCEEEEC
T ss_pred CCcEEEecC--CHHHHHHHHHHHHhC----CCCEEEEe
Confidence 377777655 899999999999874 68999854
No 70
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=91.55 E-value=0.54 Score=44.30 Aligned_cols=99 Identities=17% Similarity=0.046 Sum_probs=62.1
Q ss_pred CchHHHHHHHHhcccccCCCeEEE-EeCccccCcchHHHHHHHHH---------hCCCCEEEEEEcCCC-cccccccccc
Q 019322 147 TQLPHAVGAAYALKMDRKDACAVT-YFGDGGTSEGDFHAALNFSA---------VTEAPVIFICRNNGW-AISTPISDQF 215 (343)
Q Consensus 147 ~~lp~A~G~A~a~k~~~~~~~vv~-~~GDG~~~eG~~~Eal~~A~---------~~~Lpvi~vv~nN~~-~~~~~~~~~~ 215 (343)
..+++|.|+|++ + -++++. .++|... ..++.+...+ ..++|+++++.+ ++ +-..++..+.
T Consensus 73 ~~v~~a~G~A~~----G-~rp~~~~~f~~F~~---~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~~-G~~g~~G~tHs~~ 143 (341)
T 2ozl_B 73 GFAGIAVGAAMA----G-LRPICEFMTFNFSM---QAIDQVINSAAKTYYMSGGLQPVPIVFRGPN-GASAGVAAQHSQC 143 (341)
T ss_dssp HHHHHHHHHHHT----T-CEEEEECSSGGGGG---GGHHHHHTTTTTHHHHTTSSCCCCCEEEEEC-SCCSSCCGGGCCC
T ss_pred HHHHHHHHHHHC----C-CEEEEEeccHHHHH---HHHHHHHHHHHHHHhhccccCCCCEEEEEcC-cCCCCCCcchhhH
Confidence 446778888875 2 344444 3888773 3455555433 378999999985 43 2233333221
Q ss_pred CCccHHHhHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 019322 216 RSDGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (343)
Q Consensus 216 ~~~~~~~~a~a~-G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~ 264 (343)
.+ ...... |+.++.-. |+.+.+..++.|++. ++|++|-.
T Consensus 144 --~e--a~l~~iP~l~V~~Ps--d~~e~~~~l~~a~~~----~~Pv~i~~ 183 (341)
T 2ozl_B 144 --FA--AWYGHCPGLKVVSPW--NSEDAKGLIKSAIRD----NNPVVVLE 183 (341)
T ss_dssp --CH--HHHHTSTTCEEECCC--SHHHHHHHHHHHHHS----SSCEEEEE
T ss_pred --HH--HHhccCCCCEEEEeC--CHHHHHHHHHHHHhc----CCCEEEEE
Confidence 12 233333 77777655 999999999998863 68998864
No 71
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=91.31 E-value=0.98 Score=46.72 Aligned_cols=102 Identities=17% Similarity=0.099 Sum_probs=64.4
Q ss_pred chHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCc--cccccccccCCccHHHhHh
Q 019322 148 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA--ISTPISDQFRSDGAVVKGR 225 (343)
Q Consensus 148 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~--~~~~~~~~~~~~~~~~~a~ 225 (343)
.+++|.|+|+. +.-++++..+.--+. ....++.+++..++||+|++...+++ .++++.. +..+++-...
T Consensus 439 mv~~A~GlA~~----gG~~P~~~tf~~Fs~---f~~~air~~al~~lpVv~v~~~~gigvG~dG~THq--~ied~a~lr~ 509 (690)
T 3m49_A 439 MGAAMNGIALH----GGLKTYGGTFFVFSD---YLRPAIRLAALMQLPVTYVFTHDSIAVGEDGPTHE--PIEQLAALRA 509 (690)
T ss_dssp HHHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGC--CSSHHHHHHT
T ss_pred HHHHHHHHHHc----CCCEEEEEecHHHHH---HHHHHHHHHHhcCCCcEEEEECCCcCCCCCCCccC--CHHHHHHHhc
Confidence 35678888875 123344443322121 12345778899999999999988764 3444442 3344443333
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 019322 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (343)
Q Consensus 226 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe 263 (343)
--|+.++.-- |+.++..+++.|++. .++|++|-
T Consensus 510 iPnl~V~~Pa--d~~E~~~~l~~Ai~~---~~~Pv~ir 542 (690)
T 3m49_A 510 MPNVSVIRPA--DGNESVAAWRLALES---TNKPTALV 542 (690)
T ss_dssp STTCEEECCS--SHHHHHHHHHHHHHC---SSSCEEEE
T ss_pred CCCCEEEeeC--CHHHHHHHHHHHHHc---CCCCEEEE
Confidence 3377666544 899999999998873 36899984
No 72
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=91.21 E-value=0.73 Score=46.74 Aligned_cols=109 Identities=16% Similarity=0.158 Sum_probs=73.3
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcC
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (343)
.-+|.|.|.+.. ++-.++++..|=|+++ ..-++..|..-+.|+|+|.-+-....... ..+...|....++.+-
T Consensus 78 a~~A~GyAr~tg--g~~~v~~~TsGpG~~N---~~~~l~~A~~~~vPlvvItg~~p~~~~~~--~~~Q~~d~~~~~~~~t 150 (616)
T 2pan_A 78 SHMAEGYTRATA--GNIGVCLGTSGPAGTD---MITALYSASADSIPILCITGQAPRARLHK--EDFQAVDIEAIAKPVS 150 (616)
T ss_dssp HHHHHHHHHHST--TCCEEEEECSTHHHHT---SHHHHHHHHHTTCCEEEEEEECCGGGTTT--TCTTCCCHHHHHGGGS
T ss_pred HHHHHHHHHhcC--CCceEEEeCCCchHHH---HHHHHHHHHhcCCCEEEEecCCcccccCc--ccccccCHHHHHHHHH
Confidence 345667766520 2233455667888776 35567788888999999987664332211 1122346677888777
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhcc-CCcEEEEEEE
Q 019322 229 VRSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEALT 266 (343)
Q Consensus 229 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~-~gP~lIe~~t 266 (343)
-....+. ++.++...+++|+..++.+ .||+.|++-.
T Consensus 151 k~~~~v~--~~~~i~~~l~~A~~~A~~~r~GPV~l~iP~ 187 (616)
T 2pan_A 151 KMAVTVR--EAALVPRVLQQAFHLMRSGRPGPVLVDLPF 187 (616)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHSSSCCCEEEEEEH
T ss_pred HhhcccC--CHHHHHHHHHHHHHHHhcCCCceEEEEcch
Confidence 6777775 7888999999999888765 4899998743
No 73
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=90.83 E-value=0.93 Score=46.74 Aligned_cols=102 Identities=18% Similarity=0.110 Sum_probs=66.1
Q ss_pred hHHHHHHHHhccccc-CCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcc--ccccccccCCccHHHhHh
Q 019322 149 LPHAVGAAYALKMDR-KDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGR 225 (343)
Q Consensus 149 lp~A~G~A~a~k~~~-~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~ 225 (343)
+++|.|+|+. | .-++++.++...+. ..++++..++..++|+++++...+++. .+++.. +..+++-...
T Consensus 427 v~~a~GlA~~----G~~~~P~~~t~~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~tHq--~~edla~lr~ 497 (675)
T 1itz_A 427 GAICNGIALH----SPGFVPYCATFFVFTD---YMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ--PIEHLVSFRA 497 (675)
T ss_dssp HHHHHHHHTT----CTTCEEEEEEEGGGHH---HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTC--CSSHHHHHHS
T ss_pred HHHHHHHHhc----CCCCEEEEEEHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCCCCcC--cHHHHHHhcc
Confidence 4567777754 3 24556666654443 467888899999999999997776653 344432 2344443332
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 019322 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (343)
Q Consensus 226 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~ 264 (343)
--|+.++.- .|+.++..+++.|++. .++|++|-.
T Consensus 498 iP~l~V~~P--ad~~e~~~~l~~a~~~---~~~Pv~i~~ 531 (675)
T 1itz_A 498 MPNILMLRP--ADGNETAGAYKVAVLN---RKRPSILAL 531 (675)
T ss_dssp SSSCEEECC--CSHHHHHHHHHHHHHC---TTSCEEEEE
T ss_pred CCCeEEEEC--CCHHHHHHHHHHHHHh---CCCcEEEEe
Confidence 235555543 4899999999988863 378999853
No 74
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=90.81 E-value=0.43 Score=48.34 Aligned_cols=107 Identities=12% Similarity=0.023 Sum_probs=67.7
Q ss_pred HHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCc
Q 019322 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (343)
Q Consensus 150 p~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (343)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|+|+|.-+-........ .....|....++.+--
T Consensus 83 ~aA~GyAr~t---gkpgv~~~TsGpG~~N---~~~gia~A~~~~vPlv~ItG~~~~~~~g~~--~~Q~~d~~~~~~~~tk 154 (604)
T 2x7j_A 83 FFALGLAKAK---QRPVLLICTSGTAAAN---FYPAVVEAHYSRVPIIVLTADRPHELREVG--APQAINQHFLFGNFVK 154 (604)
T ss_dssp HHHHHHHHHH---TSCEEEEECSSHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGSSSC--CTTCCCCTTTTGGGSS
T ss_pred HHHHHHHHhh---CCCEEEEECChhHHHH---HHHHHHHHhhcCCCEEEEeCCCCHHHhCCC--CCCcCcHHHHhhhhee
Confidence 3566666553 4445677777888886 456677888889999999876543221111 1112244455666655
Q ss_pred eEEEEeCCCHHH-------HHHHHHHHHHHhhcc-CCcEEEEEEE
Q 019322 230 RSIRVDGNDALA-------IYSAVHAAREMAIGE-GRPILIEALT 266 (343)
Q Consensus 230 ~~~~VdG~d~~~-------v~~a~~~a~~~~r~~-~gP~lIe~~t 266 (343)
....|. ++++ +...+++|+..+..+ .||+.|++-.
T Consensus 155 ~~~~v~--~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 197 (604)
T 2x7j_A 155 FFTDSA--LPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPL 197 (604)
T ss_dssp CEEECC--CCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEEC
T ss_pred eeeecC--CCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEccc
Confidence 566665 4443 777788888777763 5999999854
No 75
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=89.45 E-value=0.54 Score=46.70 Aligned_cols=109 Identities=20% Similarity=0.050 Sum_probs=67.5
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcC
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (343)
.-+|.|.|.+. +.-.+++|..|=|..+ ..-++..|...++|+|+|.-+-..........+. ..|....++.+-
T Consensus 51 a~~A~Gyar~t---g~~~v~~~tsGpG~~N---~~~~l~~A~~~~~Pll~itg~~~~~~~~~~~~q~-~~d~~~~~~~~~ 123 (528)
T 1q6z_A 51 VGIADGYAQAS---RKPAFINLHSAAGTGN---AMGALSNAWNSHSPLIVTAGQQTRAMIGVEALLT-NVDAANLPRPLV 123 (528)
T ss_dssp HHHHHHHHHHH---TSCEEEEEEHHHHHHH---THHHHHHHHHTTCCEEEEEEECCHHHHTTTCTTC-CTTGGGSSTTSC
T ss_pred HHHHHHHHHHh---CCCEEEEEcCChHHHH---HHHHHHHHhhcCCCEEEEeCCCcccccCCCcccc-cccHHHHHHHhh
Confidence 34566777653 3444566666788774 4556777888999999998765322111110111 024555555554
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEE
Q 019322 229 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 266 (343)
Q Consensus 229 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~~-gP~lIe~~t 266 (343)
-....+. +++++...+.+|+..+..+. ||+.|++-.
T Consensus 124 k~~~~v~--~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~ 160 (528)
T 1q6z_A 124 KWSYEPA--SAAEVPHAMSRAIHMASMAPQGPVYLSVPY 160 (528)
T ss_dssp SCEECCS--SGGGHHHHHHHHHHHHHSSSCCCEEEEEEG
T ss_pred HhhhcCC--CHHHHHHHHHHHHHHHhcCCCCcEEEEech
Confidence 4455555 67778888888887776654 799998854
No 76
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=89.08 E-value=0.78 Score=46.18 Aligned_cols=108 Identities=10% Similarity=0.083 Sum_probs=65.2
Q ss_pred HHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCce
Q 019322 151 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVR 230 (343)
Q Consensus 151 ~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~ 230 (343)
+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|+|+|.-+-....... ..+...|....++.+--.
T Consensus 64 aAdGyAr~t---G~pgv~~~TsGpG~~N---~~~gia~A~~d~vPll~itG~~p~~~~g~--~~~Qe~d~~~~~~~~tk~ 135 (578)
T 3lq1_A 64 FALGLAKAS---KRPVVLLCTSGTAAAN---YFPAVAEANLSQIPLIVLTADRPHELRNV--GAPQAMDQLHLYGSHVKD 135 (578)
T ss_dssp HHHHHHHHH---CCCEEEEECSSHHHHT---THHHHHHHHHTTCCEEEEEEECCGGGTTS--SCTTCCCCTTTTGGGSSE
T ss_pred HHHHHHHhh---CCCEEEEECCchhhhh---hhHHHHHHHhcCCCeEEEeCCCCHHhhcC--CCCCCcCHhhHHhhheee
Confidence 566776653 4445677777888886 44668888899999999986543221110 111122445555555444
Q ss_pred EEEEe-CCCHH----HHHHHHHHHHHHhhcc-CCcEEEEEEE
Q 019322 231 SIRVD-GNDAL----AIYSAVHAAREMAIGE-GRPILIEALT 266 (343)
Q Consensus 231 ~~~Vd-G~d~~----~v~~a~~~a~~~~r~~-~gP~lIe~~t 266 (343)
...|. ..+.. .+..++++|+..+..+ .||+.|++-.
T Consensus 136 ~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 136 FTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp EEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEC
T ss_pred EeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECcc
Confidence 55554 33422 2345677777776665 5999999853
No 77
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=89.04 E-value=1.3 Score=41.40 Aligned_cols=101 Identities=16% Similarity=0.078 Sum_probs=63.4
Q ss_pred CchHHHHHHHHhcccccCCCeEEEE-eCccccCcchHHHHHH-HHHh--------CCCCEEEEEEcCCCccccccccccC
Q 019322 147 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALN-FSAV--------TEAPVIFICRNNGWAISTPISDQFR 216 (343)
Q Consensus 147 ~~lp~A~G~A~a~k~~~~~~~vv~~-~GDG~~~eG~~~Eal~-~A~~--------~~Lpvi~vv~nN~~~~~~~~~~~~~ 216 (343)
+.+++|.|+|++- -++++.+ ++++.. ..++.+. .++. +++|+++++.+.+ +...++.. +
T Consensus 63 ~~~~~a~G~A~~G-----~rp~~~~t~~~F~~---~a~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g-~~~G~th~--s 131 (338)
T 1qs0_B 63 GIVGTAVGMGAYG-----LRPVVEIQFADYFY---PASDQIVSEMARLRYRSAGEFIAPLTLRMPCGG-GIYGGQTH--S 131 (338)
T ss_dssp HHHHHHHHHHHHT-----CEEEEECSCGGGCG---GGHHHHHTTTTTHHHHTTTSSCCCCEEEEEECC-SSSCCSSS--S
T ss_pred HHHHHHHHHHhCC-----CEEEEEeccHhHHH---HHHHHHHHHHHHHhhhcCCCCCCCEEEEEeCCC-CCCCcccc--c
Confidence 4467788888762 2344434 888863 3455553 3433 3599999987654 43333332 2
Q ss_pred CccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 019322 217 SDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (343)
Q Consensus 217 ~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~ 264 (343)
..|+.-...-.|+.++.-. |+.+.+..++.|++. ++|++|-.
T Consensus 132 ~~d~~~l~~iP~l~V~~Ps--d~~e~~~~l~~A~~~----~~Pv~i~~ 173 (338)
T 1qs0_B 132 QSPEAMFTQVCGLRTVMPS--NPYDAKGLLIASIEC----DDPVIFLE 173 (338)
T ss_dssp CCCHHHHTTSTTCEEECCC--SHHHHHHHHHHHHHS----SSCEEEEE
T ss_pred ccHHHHHhcCCCCEEEeeC--CHHHHHHHHHHHHhc----CCcEEEEE
Confidence 2344333333388888766 999999999998863 68999843
No 78
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=88.77 E-value=1.2 Score=44.77 Aligned_cols=108 Identities=16% Similarity=0.064 Sum_probs=66.9
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcccccc---cccc---CCccHHH
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI---SDQF---RSDGAVV 222 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~---~~~~---~~~~~~~ 222 (343)
.-+|.|.|.+. + -.++++..|=|+++ ..-++..|...++|+|+|.-+......... .... ...+...
T Consensus 76 ~~~A~GyAr~t---G-~~v~~~tsGpG~~N---~~~gi~~A~~~~vPlv~itg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (570)
T 2vbf_A 76 SYMADGYARTK---K-AAAFLTTFGVGELS---AINGLAGSYAENLPVVEIVGSPTSKVQNDGKFVHHTLADGDFKHFMK 148 (570)
T ss_dssp HHHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCCHHHH
T ss_pred HHHHHHHHHHh---C-CeEEEEcCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCCHHHhhccccceeeccccchHHHHH
Confidence 34567777653 4 44666667777775 456677888899999999876643221100 0000 1113456
Q ss_pred hHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEE
Q 019322 223 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (343)
Q Consensus 223 ~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t 266 (343)
.++.+--....+. + +++...+++|+..+..+.||+.|++-.
T Consensus 149 ~~~~~tk~~~~v~--~-~~~~~~l~~A~~~A~~~~GPV~l~iP~ 189 (570)
T 2vbf_A 149 MHEPVTAARTLLT--A-ENATYEIDRVLSQLLKERKPVYINLPV 189 (570)
T ss_dssp HTGGGCSEEEECC--T-TTHHHHHHHHHHHHHHHCCCEEEEEEH
T ss_pred HhhhhEEEEEEEC--c-ccHHHHHHHHHHHHhhCCCCEEEEcch
Confidence 6777766677776 4 556666666666665567999999854
No 79
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=88.63 E-value=1.8 Score=44.65 Aligned_cols=101 Identities=13% Similarity=0.035 Sum_probs=65.1
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcc--ccccccccCCccHHHhHhh
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 226 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~a 226 (343)
+++|.|+|+. +.-++++.++..-+. ..++++..++..++|+++++...+++. .+++.. +..+++-...-
T Consensus 415 ~~~a~GlA~~----GG~~P~~~~~~~F~~---~~~~~ir~~a~~~~pvv~~~t~~g~g~G~dG~tHq--~~edla~lr~i 485 (673)
T 1r9j_A 415 CAILNGLDAH----DGIIPFGGTFLNFIG---YALGAVRLAAISHHRVIYVATHDSIGVGEDGPTHQ--PVELVAALRAM 485 (673)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTC--CSSHHHHHHHS
T ss_pred HHHHHHHHhc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEECCccCcCCCCcccC--CHHHHHHHcCC
Confidence 4577777765 223455555533332 345678889999999999997777654 344432 23444443333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 019322 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (343)
Q Consensus 227 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe 263 (343)
-|+.++.-- |+.++..+++.|++. .++|++|-
T Consensus 486 P~l~V~~Pa--d~~e~~~~l~~a~~~---~~~Pv~i~ 517 (673)
T 1r9j_A 486 PNLQVIRPS--DQTETSGAWAVALSS---IHTPTVLC 517 (673)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHHC---TTCCEEEE
T ss_pred CCCEEEeCC--CHHHHHHHHHHHHHh---CCCeEEEE
Confidence 366666544 889999999988863 37899985
No 80
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=88.58 E-value=0.78 Score=45.92 Aligned_cols=109 Identities=13% Similarity=0.041 Sum_probs=67.7
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccc---cccc---cccCCccHHH
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS---TPIS---DQFRSDGAVV 222 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~---~~~~---~~~~~~~~~~ 222 (343)
.-+|.|.|.+. + -.+++|..|=|+++ ..-++..|...++|+|+|.-+-..... .... ......+..+
T Consensus 55 a~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~~Pll~itg~~~~~~~~~~~~~~~~~g~~~~q~~~~ 127 (563)
T 2vk8_A 55 AYAADGYARIK---G-MSCIITTFGVGELS---ALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHR 127 (563)
T ss_dssp HHHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTSCSSSCSSHHHH
T ss_pred HHHHHHHHHhh---C-CcEEEEcCCCcHHH---HHHHHHHHHhhCCCEEEEECCCChHHhhcccccccccCCcchHHHHH
Confidence 34566777654 3 34666667888875 456677888899999999876432211 0000 0001124567
Q ss_pred hHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEE
Q 019322 223 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (343)
Q Consensus 223 ~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t 266 (343)
.++.+--....+. +++++...+.+|+..+..+.||+.|++-.
T Consensus 128 ~~~~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 169 (563)
T 2vk8_A 128 MSANISETTAMIT--DIATAPAEIDRCIRTTYVTQRPVYLGLPA 169 (563)
T ss_dssp HHHTTCSEEEECC--CTTTHHHHHHHHHHHHHHHTSCEEEEEET
T ss_pred HhhhhEEEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 7777776777776 65556666666665555556999998743
No 81
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=88.25 E-value=1.8 Score=41.11 Aligned_cols=99 Identities=15% Similarity=-0.035 Sum_probs=56.3
Q ss_pred CchHHHHHHHHhcccccCCCeEEEE-eCccccCcchHHHHHHH-HHhC--------CCCEEEEEEcCCCccccccccccC
Q 019322 147 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALNF-SAVT--------EAPVIFICRNNGWAISTPISDQFR 216 (343)
Q Consensus 147 ~~lp~A~G~A~a~k~~~~~~~vv~~-~GDG~~~eG~~~Eal~~-A~~~--------~Lpvi~vv~nN~~~~~~~~~~~~~ 216 (343)
..+++|.|+|++ + -++++.+ ++|... ..++.+.. ++.. ++|+++++.+.+..-..+.. +
T Consensus 109 ~~v~~a~G~A~~----G-~rpv~~~tf~~Fl~---~a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg~~g~g~~h---s 177 (369)
T 1ik6_A 109 GILGFAMGMAMA----G-LKPVAEIQFVDFIW---LGADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLYH---S 177 (369)
T ss_dssp HHHHHHHHHHHT----T-CEEEEECCCC-------CCHHHHHHHHHHHHC------CCCCEEEEEECC------------
T ss_pred HHHHHHHHHHHC----C-CeeEEEecchhHHH---HHHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCCCCCCccc---c
Confidence 346678888875 2 3444444 888663 33444433 4433 99999999877633222222 1
Q ss_pred CccHHHhHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 019322 217 SDGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (343)
Q Consensus 217 ~~~~~~~a~a~-G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe 263 (343)
..+ ....... |+.++.-. |+.+....++.|++ .++|++|-
T Consensus 178 ~~~-~a~l~~iPnl~V~~Ps--d~~e~~~ll~~A~~----~~~Pv~i~ 218 (369)
T 1ik6_A 178 NSP-EAIFVHTPGLVVVMPS--TPYNAKGLLKAAIR----GDDPVVFL 218 (369)
T ss_dssp --H-HHHHHTCTTCEEECCC--SHHHHHHHHHHHHH----SSSCEEEE
T ss_pred ccH-HHHHcCCCCcEEEecC--CHHHHHHHHHHHHh----CCCCEEEE
Confidence 222 2334443 77777655 99999999999886 47899984
No 82
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=88.09 E-value=2.9 Score=43.35 Aligned_cols=100 Identities=15% Similarity=0.061 Sum_probs=64.5
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCc--cccccccccCCccHHHhHhh
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA--ISTPISDQFRSDGAVVKGRA 226 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~--~~~~~~~~~~~~~~~~~a~a 226 (343)
+++|.|+|+. +.-++++.++. .|.+ .....+.+++..++||+++....+++ .++++.. +..+++-...-
T Consensus 461 v~~AaGlA~~----~G~~Pv~~~f~--~F~~-~~~~~ir~~a~~~lpv~~v~thdg~gvG~dG~THq--~~ed~a~lr~i 531 (711)
T 3uk1_A 461 SAAINGLVLH----GGYKPFGGTFL--TFSD-YSRNALRVAALMKVPSIFVFTHDSIGLGEDGPTHQ--SVEHVASLRLI 531 (711)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEG--GGHH-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTC--CSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCEEEEEEhH--HHHH-HHHHHHHHhhhcCCCEEEEEECCCcCcCCCCCccC--ChhHHHHHhcC
Confidence 6678888873 12344555542 3432 34567778888999999999877764 3444442 33444433333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 019322 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (343)
Q Consensus 227 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe 263 (343)
-|+.++.-- |+.++..+++.|++ .++|++|-
T Consensus 532 Pnl~V~~Pa--d~~E~~~~l~~Ai~----~~~Pv~ir 562 (711)
T 3uk1_A 532 PNLDVWRPA--DTVETAVAWTYAVA----HQHPSCLI 562 (711)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHH----SSSCEEEE
T ss_pred CCCEEEecC--CHHHHHHHHHHHHh----cCCCEEEE
Confidence 366666544 89999999998887 47999884
No 83
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=87.78 E-value=2.5 Score=43.75 Aligned_cols=101 Identities=12% Similarity=0.064 Sum_probs=63.3
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCc--cccccccccCCccHHHhHhh
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA--ISTPISDQFRSDGAVVKGRA 226 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~--~~~~~~~~~~~~~~~~~a~a 226 (343)
+++|.|+|+. +.-++++..+.. |.. ....++.+++..++||+|+....+++ .++++.. +..+++-...-
T Consensus 445 v~~A~GlA~~----gG~~Pv~~tF~~--F~d-~~~~~ir~~al~~lpvv~v~thdg~gvG~dG~THq--~ied~a~lr~i 515 (700)
T 3rim_A 445 GAILSGIVLH----GPTRAYGGTFLQ--FSD-YMRPAVRLAALMDIDTIYVWTHDSIGLGEDGPTHQ--PIEHLSALRAI 515 (700)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGG--GGG-GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTS--CSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCEEEEEecHH--HHH-HHHHHHHHhcCCCCCEEEEEeCCCcccCCCCCccC--ChhHHHHHhcC
Confidence 5677888875 223344432221 211 12345778899999999999877764 3444442 33455544333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccC--CcEEEE
Q 019322 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEG--RPILIE 263 (343)
Q Consensus 227 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~--gP~lIe 263 (343)
-|+.++.-- |+.++..+++.|++. .+ +|++|-
T Consensus 516 Pnl~V~~Pa--d~~e~~~~l~~Ai~~---~~~~~Pv~ir 549 (700)
T 3rim_A 516 PRLSVVRPA--DANETAYAWRTILAR---RNGSGPVGLI 549 (700)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHTT---TTCSSCEEEE
T ss_pred CCCEEEeCC--CHHHHHHHHHHHHHc---cCCCCCEEEE
Confidence 377666544 899999999988874 34 799985
No 84
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=85.80 E-value=1.4 Score=43.89 Aligned_cols=108 Identities=18% Similarity=0.072 Sum_probs=65.8
Q ss_pred hHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccc---cc---cccCCccHHH
Q 019322 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP---IS---DQFRSDGAVV 222 (343)
Q Consensus 149 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~---~~---~~~~~~~~~~ 222 (343)
.-+|.|.|.+. + -.++++..|=|.++ ..-++..|...++|+|+|.-+-....... .. ......+..+
T Consensus 56 ~~~A~Gyar~t---g-~~v~~~tsGpG~~N---~~~gv~~A~~~~~Pll~itg~~p~~~~~~~~~~~~~~g~~~~q~~~~ 128 (552)
T 1ovm_A 56 SYAADGYARCK---G-FAALLTTFGVGELS---AMNGIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDGEFRHFYH 128 (552)
T ss_dssp HHHHHHHHHHH---S-CEEEEEETTHHHHH---THHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCSHHHH
T ss_pred HHHHHHHHHhh---C-CcEEEEccCCcHHH---HHHHHHHHhhhcCCEEEEECCCCHHHHhcccccccccCCCcHHHHHH
Confidence 44677777764 3 33677777888764 35567888899999999987653221100 00 0001124556
Q ss_pred hHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEE
Q 019322 223 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (343)
Q Consensus 223 ~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t 266 (343)
.++.+--....+. + +.+...+.+|+..+..+.||+.|++-.
T Consensus 129 ~~~~~tk~~~~v~--~-~~~~~~i~~A~~~a~~~~GPV~l~iP~ 169 (552)
T 1ovm_A 129 MSEPITVAQAVLT--E-QNACYEIDRVLTTMLRERRPGYLMLPA 169 (552)
T ss_dssp HTGGGCSEEEECC--T-TTHHHHHHHHHHHHHHHTCCEEEEEEH
T ss_pred HHHhheeEEEEEc--c-ccHHHHHHHHHHHHHhCCCCEEEEeeh
Confidence 7777777777776 3 445555555555544446999998844
No 85
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=84.98 E-value=6.1 Score=36.55 Aligned_cols=99 Identities=15% Similarity=0.067 Sum_probs=61.6
Q ss_pred CchHHHHHHHHhcccccCCCeEEEE-eCccccCcchHHHHHHH-HHh--------CCCCEEEEEEcCCCccccccccccC
Q 019322 147 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALNF-SAV--------TEAPVIFICRNNGWAISTPISDQFR 216 (343)
Q Consensus 147 ~~lp~A~G~A~a~k~~~~~~~vv~~-~GDG~~~eG~~~Eal~~-A~~--------~~Lpvi~vv~nN~~~~~~~~~~~~~ 216 (343)
+.+++|.|+|++- -++++.+ +++... ..++.+.. ++. .++|+|+++. .++........ +
T Consensus 62 ~~v~~a~G~A~~G-----~~p~~~~t~~~F~~---~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~-~g~~~~~g~~h--s 130 (324)
T 1umd_B 62 AIVGAALGMAAHG-----LRPVAEIQFADYIF---PGFDQLVSQVAKLRYRSGGQFTAPLVVRMP-SGGGVRGGHHH--S 130 (324)
T ss_dssp HHHHHHHHHHHHT-----CEEEEECSSGGGCG---GGHHHHHHTTTTHHHHTTTSSCCCCEEEEE-ECSSSSCGGGS--S
T ss_pred HHHHHHHHHHHCC-----CEEEEEeccHhHHH---HHHHHHHHHHHHHHhhcCCCCcCCEEEEEc-CCCCCCCCCcc--c
Confidence 3467788888762 2444444 788752 34555543 343 6889999987 34433322222 2
Q ss_pred CccHHHhHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 019322 217 SDGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (343)
Q Consensus 217 ~~~~~~~a~a~-G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe 263 (343)
..+. ...... |+.++.-. |+.+.+..++.|++ .++|++|-
T Consensus 131 ~~~~-a~~~~iP~~~V~~P~--d~~e~~~~l~~a~~----~~~Pv~i~ 171 (324)
T 1umd_B 131 QSPE-AHFVHTAGLKVVAVS--TPYDAKGLLKAAIR----DEDPVVFL 171 (324)
T ss_dssp CCCH-HHHHTSTTCEEEECC--SHHHHHHHHHHHHH----CSSCEEEE
T ss_pred hhHH-HHHhcCCCCEEEEeC--CHHHHHHHHHHHHh----cCCCEEEE
Confidence 2334 344444 77777655 99999999999986 47899884
No 86
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=84.34 E-value=3.7 Score=38.07 Aligned_cols=99 Identities=12% Similarity=0.001 Sum_probs=60.6
Q ss_pred CchHHHHHHHHhcccccCCCeEEEE-eCccccCcchHHHHHHH-HHh--------CCCCEEEEEEcCCCccccccccccC
Q 019322 147 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALNF-SAV--------TEAPVIFICRNNGWAISTPISDQFR 216 (343)
Q Consensus 147 ~~lp~A~G~A~a~k~~~~~~~vv~~-~GDG~~~eG~~~Eal~~-A~~--------~~Lpvi~vv~nN~~~~~~~~~~~~~ 216 (343)
+.+++|+|+|++ | -++++++ ++++.. ..++.+.. ++. .++|+|+++. .++....... .+
T Consensus 61 ~~v~~a~G~A~~----G-~rp~~~~t~~~F~~---~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~-~g~~~~~g~~--hs 129 (324)
T 1w85_B 61 GIGGLAIGLALQ----G-FRPVPEIQFFGFVY---EVMDSICGQMARIRYRTGGRYHMPITIRSP-FGGGVHTPEL--HS 129 (324)
T ss_dssp HHHHHHHHHHHT----T-CEEEEBCSSGGGGG---GTHHHHHTTGGGHHHHTTTSSCCCCEEEEE-ECSSSCCCTT--SS
T ss_pred HHHHHHHHHHhC----C-CEEEEEecchhHHH---HHHHHHHHHHHHHhhhccCCCcCCEEEEEe-ccCCCCCCCc--cc
Confidence 446778888875 2 2344434 777763 34555542 443 7899999987 3443332222 22
Q ss_pred CccHHHhHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 019322 217 SDGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (343)
Q Consensus 217 ~~~~~~~a~a~-G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe 263 (343)
..+. ....+. |+.++.-. |+.+.+..++.|++ .++|++|-
T Consensus 130 ~~~~-a~~~~iP~l~V~~Ps--d~~e~~~~l~~a~~----~~~Pv~i~ 170 (324)
T 1w85_B 130 DSLE-GLVAQQPGLKVVIPS--TPYDAKGLLISAIR----DNDPVIFL 170 (324)
T ss_dssp CCCH-HHHTTSTTCEEECCS--SHHHHHHHHHHHHH----SSSCEEEE
T ss_pred ccHH-HHHccCCCCEEEeeC--CHHHHHHHHHHHHH----cCCCEEEE
Confidence 2333 334443 66666554 99999999999886 47899985
No 87
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=82.27 E-value=4.4 Score=37.94 Aligned_cols=99 Identities=8% Similarity=-0.010 Sum_probs=61.3
Q ss_pred CchHHHHHHHHhcccccCCCeEEEE-eCccccCcchHHHHHH-HHHhC--------CC-CEEEEEEcCCCcccccccccc
Q 019322 147 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALN-FSAVT--------EA-PVIFICRNNGWAISTPISDQF 215 (343)
Q Consensus 147 ~~lp~A~G~A~a~k~~~~~~~vv~~-~GDG~~~eG~~~Eal~-~A~~~--------~L-pvi~vv~nN~~~~~~~~~~~~ 215 (343)
+.+++|.|+|++ | -++++.+ ++++.. ..++.+. .++.+ ++ |+++++...+. ...++..
T Consensus 78 ~~v~~a~G~A~~----G-~rp~~~~tf~~F~~---~a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g~-~~G~th~-- 146 (342)
T 2bfd_B 78 GIVGFGIGIAVT----G-ATAIAEIQFADYIF---PAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCV-GHGALYH-- 146 (342)
T ss_dssp HHHHHHHHHHHT----T-CCEEEECSSGGGCG---GGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESCC-SSCGGGS--
T ss_pred HHHHHHHHHHHC----C-CeeEEEecchhHHH---HHHHHHHHHHHHHHhhhcCCccCCCEEEEEecCCC-CCCcchh--
Confidence 346778888876 2 3444433 888854 3455553 44433 44 99999876543 3333332
Q ss_pred CCccHHHhHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 019322 216 RSDGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (343)
Q Consensus 216 ~~~~~~~~a~a~-G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe 263 (343)
+..++.- ..+. |+.++.-. |+.+.+..++.|+++ ++|++|-
T Consensus 147 ~~~d~~~-l~~iP~l~V~~Ps--d~~e~~~~l~~a~~~----~~Pv~i~ 188 (342)
T 2bfd_B 147 SQSPEAF-FAHCPGIKVVIPR--SPFQAKGLLLSCIED----KNPCIFF 188 (342)
T ss_dssp SCCCHHH-HHTSTTCEEECCS--SHHHHHHHHHHHHHS----SSCEEEE
T ss_pred hHhHHHH-HhcCCCcEEEeeC--CHHHHHHHHHHHHhc----CCcEEEE
Confidence 2344433 3333 77776655 999999999998863 6899984
No 88
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=81.97 E-value=6.2 Score=43.49 Aligned_cols=113 Identities=16% Similarity=0.070 Sum_probs=71.0
Q ss_pred chHHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhc
Q 019322 148 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAY 227 (343)
Q Consensus 148 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~ 227 (343)
.+++++|++++ +.++++.+--.+++ .+.|.|..++-..+|+|+++.+....-.+ ........|+. .++..
T Consensus 66 A~~aaiGAa~a------GaR~~t~Ts~~Gl~--lm~e~l~~~ag~~~P~Vi~va~R~g~~~g-lsi~~~hsd~~-~ar~~ 135 (1231)
T 2c42_A 66 AAGAVHGALAA------GALTTTFTASQGLL--LMIPNMYKISGELLPGVFHVTARAIAAHA-LSIFGDHQDIY-AARQT 135 (1231)
T ss_dssp HHHHHHHHHHT------TCCEEEEECHHHHH--HHHHHHHHHHHTTCCCEEEEEECCCCSSS-BCCSCCSHHHH-TTTTS
T ss_pred HHHHHHHHHHc------CChHhhhccHHHHH--HHHHHHHHHhCCCCCEEEEECCCCccCCC-CcCCCchhhHH-HHhcC
Confidence 36778888876 34455555444443 45677865555678999988877643111 00000111221 24556
Q ss_pred CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEEecCCCCC
Q 019322 228 GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 273 (343)
Q Consensus 228 G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs 273 (343)
|++++.-. ++.+.+..+..|.+.+.+..-|+++-...+|. +|.
T Consensus 136 G~~vl~ps--s~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~-sh~ 178 (1231)
T 2c42_A 136 GFAMLASS--SVQEAHDMALVAHLAAIESNVPFMHFFDGFRT-SHE 178 (1231)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHHHHHHHCCCEEEEEETTTT-TTC
T ss_pred CcEEEECC--CHHHHHHHHHHHHHHHHHcCCCEEEEecCccc-ccc
Confidence 88777554 89999988888877777778999988777665 454
No 89
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=80.07 E-value=3.2 Score=41.45 Aligned_cols=107 Identities=13% Similarity=0.002 Sum_probs=64.9
Q ss_pred HHHHHHHHhcccccCCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCc
Q 019322 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (343)
Q Consensus 150 p~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (343)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-+.|+|+|.-+-........ .+...|....++.+--
T Consensus 60 ~~AdGyAr~t---G~pgv~~~TsGpG~~N---~~~gia~A~~d~vPll~itG~~~~~~~g~~--~~Q~~d~~~~~~~~tk 131 (556)
T 3hww_A 60 HLALGLAKVS---KQPVAVIVTSGTAVAN---LYPALIEAGLTGEKLILLTADRPPELIDCG--ANQAIRQPGMFASHPT 131 (556)
T ss_dssp HHHHHHHHHH---CSCEEEEECSSHHHHT---THHHHHHHHHHCCCEEEEEEECCGGGSSSS--CTTCCCCTTTTTTCSS
T ss_pred HHHHHHHHhh---CCCEEEEECCCcHHHh---hhHHHHHHHHhCCCeEEEeCCCCHHHhccC--CCccccHHHHHhhhee
Confidence 3466666553 4455677777888886 446688888899999999865543221111 1112244455555544
Q ss_pred eEEEEe-CC---CHHHHHHHHHHHHHHhhccCCcEEEEEEE
Q 019322 230 RSIRVD-GN---DALAIYSAVHAAREMAIGEGRPILIEALT 266 (343)
Q Consensus 230 ~~~~Vd-G~---d~~~v~~a~~~a~~~~r~~~gP~lIe~~t 266 (343)
....+. .. .+..+.+++++|+.. ...||+.|++-.
T Consensus 132 ~~~~v~~~~~~~~~~~i~~~i~~A~~~--~r~GPV~i~iP~ 170 (556)
T 3hww_A 132 HSISLPRPTQDIPARWLVSTIDHALGT--LHAGGVHINCPF 170 (556)
T ss_dssp EEEECCCCCTTSCHHHHHHHHHHHHHS--CCSSCEEEEEEC
T ss_pred EEEecCCCcccccHHHHHHHHHHHHhc--CCCCCEEEeCCc
Confidence 455554 11 134588888888832 235899999853
No 90
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=79.59 E-value=12 Score=31.66 Aligned_cols=88 Identities=15% Similarity=0.013 Sum_probs=51.5
Q ss_pred chHHHHHHHHhccccc-CCCeEEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcc------------cccccc-
Q 019322 148 QLPHAVGAAYALKMDR-KDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI------------STPISD- 213 (343)
Q Consensus 148 ~lp~A~G~A~a~k~~~-~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~------------~~~~~~- 213 (343)
.+..|+-.|+..-... ....+++++.||.-+.+...+.+..+...+++|..|-.-+.-+. ......
T Consensus 93 ~l~~al~~a~~~l~~~~~~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~ 172 (218)
T 3ibs_A 93 AIGEAINLATRSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVI 172 (218)
T ss_dssp CHHHHHHHHHTTSCSCSSCCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBC
T ss_pred cHHHHHHHHHHHHhhCCCCCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEe
Confidence 3444555444322222 34679999999999877677878888777777766644331110 000000
Q ss_pred --ccCCccHHHhHhhcCceEEEEe
Q 019322 214 --QFRSDGAVVKGRAYGVRSIRVD 235 (343)
Q Consensus 214 --~~~~~~~~~~a~a~G~~~~~Vd 235 (343)
......+.++|..-|..++.++
T Consensus 173 ~~~~~~~~L~~iA~~~gG~~~~~~ 196 (218)
T 3ibs_A 173 VTRLNEGMCQEIAKDGKGIYVRVD 196 (218)
T ss_dssp EECCCHHHHHHHHHHTEEEEEEEC
T ss_pred EecCCHHHHHHHHHhcCCEEEECC
Confidence 1112246778888888888887
No 91
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=73.34 E-value=9.2 Score=40.53 Aligned_cols=107 Identities=10% Similarity=0.054 Sum_probs=59.9
Q ss_pred CchHHHHHHHHhcccccCCCeEEEEeCccccCcch---HHHHHHHHH-hC--CCCEEEEEEcCCCccccccccccCCccH
Q 019322 147 TQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD---FHAALNFSA-VT--EAPVIFICRNNGWAISTPISDQFRSDGA 220 (343)
Q Consensus 147 ~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~---~~Eal~~A~-~~--~Lpvi~vv~nN~~~~~~~~~~~~~~~~~ 220 (343)
+.+++|+|+|++ +++.+++.-.-=|.|..+. +-+-++-+. .| ++||++++...+.+ .++...+...+++
T Consensus 595 ~~vG~a~G~A~~----G~~~~~i~eaqf~dF~~~AQ~~~DQ~i~~~~~k~~~~~~vvi~~p~G~~G-~Gp~Hs~~~~E~~ 669 (868)
T 2yic_A 595 AAVGFEYGYSVG----NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG-QGPDHTSGRIERF 669 (868)
T ss_dssp HHHHHHHHHHHH----CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSS-SCTTSSCCCHHHH
T ss_pred HHHHHHHHHHcc----CCCCceEEEEehHHHHhhHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCC-CChhhcCCcHHHH
Confidence 346677777776 4555555544445554443 322222221 23 67999999865543 4443332222333
Q ss_pred HHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEE
Q 019322 221 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILI 262 (343)
Q Consensus 221 ~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lI 262 (343)
.....--|+.++... |+.+....++.++.. ..++|++|
T Consensus 670 l~l~~~pnm~V~~Ps--~p~~~~~lLr~a~~~--~~~~Pvii 707 (868)
T 2yic_A 670 LQLWAEGSMTIAMPS--TPANYFHLLRRHGKD--GIQRPLIV 707 (868)
T ss_dssp HHHCCTTSCEEECCC--SHHHHHHHHHHHHHS--SCCCCEEE
T ss_pred HhcCCCCCCEEEEeC--CHHHHHHHHHHHHhc--CCCCcEEE
Confidence 333332366666544 899999999887752 23589877
No 92
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=72.64 E-value=9.6 Score=41.51 Aligned_cols=109 Identities=10% Similarity=0.040 Sum_probs=61.1
Q ss_pred cCchHHHHHHHHhcccccCCCeEEEEeCccccCcch---HHHHHHHHH---hCCCCEEEEEEcCCCccccccccccCCcc
Q 019322 146 ATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD---FHAALNFSA---VTEAPVIFICRNNGWAISTPISDQFRSDG 219 (343)
Q Consensus 146 G~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~eG~---~~Eal~~A~---~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~ 219 (343)
.+.++.|+|+|++ +++.+++.-.-=|.|.++. +-+-++-+. ..++||++++...+.+ .++...+...++
T Consensus 839 ~~~vg~a~G~A~~----G~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~~~k~~~~~~vv~~lp~G~~G-~G~~Hs~~~~E~ 913 (1113)
T 2xt6_A 839 FAAVGFEYGYSVG----NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG-QGPDHTSGRIER 913 (1113)
T ss_dssp HHHHHHHHHHHHH----CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSS-SCTTSSCCCHHH
T ss_pred HHHHHHHHHHHhc----CCCCceEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCCC-CChhhhcccHHH
Confidence 3446777777776 4555555544445554443 333222221 2267999999865533 444433322233
Q ss_pred HHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 019322 220 AVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (343)
Q Consensus 220 ~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe 263 (343)
+.....--|+.++... |+.+.+..++.++.. ..++|++|-
T Consensus 914 ~l~l~~~pnm~V~~Ps--~~~~~~~lLr~a~~~--~~~~Pvii~ 953 (1113)
T 2xt6_A 914 FLQLWAEGSMTIAMPS--TPANYFHLLRRHGKD--GIQRPLIVF 953 (1113)
T ss_dssp HHHHCCTTSCEEECCS--SHHHHHHHHHHHHHS--SCCCCEEEE
T ss_pred HHhcCCCCCcEEEecC--CHHHHHHHHHHHHhc--cCCCCEEEE
Confidence 3333322366665544 899999999887752 235898873
No 93
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=70.87 E-value=8.1 Score=41.27 Aligned_cols=103 Identities=14% Similarity=0.164 Sum_probs=58.2
Q ss_pred cCchHHHHHHHHhcccccCCCeEEE--EeCccccCcc--hHHHHH-HHH-HhC--CCCEEEEEEcCCCccccccccccCC
Q 019322 146 ATQLPHAVGAAYALKMDRKDACAVT--YFGDGGTSEG--DFHAAL-NFS-AVT--EAPVIFICRNNGWAISTPISDQFRS 217 (343)
Q Consensus 146 G~~lp~A~G~A~a~k~~~~~~~vv~--~~GDG~~~eG--~~~Eal-~~A-~~~--~Lpvi~vv~nN~~~~~~~~~~~~~~ 217 (343)
.+.++.|.|+|++ +++..+|+ .+|| |.+| ..+.-+ +-+ +.| ++||++++.. +|...++...+
T Consensus 662 ~~~vg~a~G~A~~----G~~~lpv~e~qf~d--F~~~AQra~DQii~~~~ak~~~~~~vv~~l~~-G~~g~G~~Hss--- 731 (933)
T 2jgd_A 662 EAVLAFEYGYATA----EPRTLTIWEAQFGD--FANGAQVVIDQFISSGEQKWGRMCGLVMLLPH-GYEGQGPEHSS--- 731 (933)
T ss_dssp HHHHHHHHHHHHH----CTTSEEEEEC-CGG--GGGGGHHHHHHTTTTHHHHHCCCCCCEEEEEC-CCSSSCTTSSC---
T ss_pred HHHHHHHHHHHhc----CCCCCCEEEEEEhh--hhcccHHHHHHHHHHHHHHHccCCCEEEEEeC-CCCCCCccccc---
Confidence 3446677777776 44433443 4654 4333 233333 233 344 7899999986 55433443322
Q ss_pred ccHHHhHhhc---CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEE
Q 019322 218 DGAVVKGRAY---GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILI 262 (343)
Q Consensus 218 ~~~~~~a~a~---G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lI 262 (343)
..+.+.+... |+.++... |+.+....++.++. +..++|++|
T Consensus 732 ~~~E~~l~~~~~pnm~V~~Ps--t~~e~~~lLr~a~~--~~~~~Pvii 775 (933)
T 2jgd_A 732 ARLERYLQLCAEQNMQVCVPS--TPAQVYHMLRRQAL--RGMRRPLVV 775 (933)
T ss_dssp CCHHHHHHTCCTTCCEEECCC--SHHHHHHHHHHHHH--SSCCCCEEE
T ss_pred chHHHHHHHhCCCCeEEEecC--CHHHHHHHHHHHHH--hcCCCcEEE
Confidence 2233444433 66665544 99999999988742 223789998
No 94
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=58.59 E-value=13 Score=29.43 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=29.3
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcE
Q 019322 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI 260 (343)
Q Consensus 226 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~ 260 (343)
+-|.-.++..|+|.+++..|+++.+..+|+..|.+
T Consensus 81 gsgvm~i~f~gddlea~ekalkemirqarkfagtv 115 (170)
T 4hhu_A 81 GSGVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 115 (170)
T ss_dssp TCCEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CceEEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 34666777899999999999999999999987643
No 95
>2zzd_B Thiocyanate hydrolase subunit beta; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_B 2dxb_B 2dd5_B* 2dxc_B*
Probab=56.34 E-value=16 Score=30.35 Aligned_cols=35 Identities=9% Similarity=0.090 Sum_probs=28.4
Q ss_pred HHHHHhCCCcHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Q 019322 287 IEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQVI 327 (343)
Q Consensus 287 ~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~ 327 (343)
++.| |..+...|+++|++|++|+++..+++++...
T Consensus 109 Ye~W------L~ALe~lLvekGvit~~EL~ar~aEv~ar~~ 143 (157)
T 2zzd_B 109 YGRW------LLTAARILVDKQFVTLTELHNKIVEMRERVA 143 (157)
T ss_dssp HHHH------HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHH------HHHHHHHHHHcCCCCHHHHHHHHHHHHHhhh
Confidence 5677 3678899999999999999888877776654
No 96
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=55.26 E-value=17 Score=28.68 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=28.6
Q ss_pred CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcE
Q 019322 228 GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI 260 (343)
Q Consensus 228 G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~ 260 (343)
|.-.++..|+|.+++..|+++.+..+|+..|.+
T Consensus 2 gvm~i~f~gddlea~ekalkemirqarkfagtv 34 (170)
T 4hhu_A 2 GVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 34 (170)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 566778899999999999999999999987754
No 97
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=48.34 E-value=24 Score=24.72 Aligned_cols=29 Identities=24% Similarity=0.204 Sum_probs=24.6
Q ss_pred EEEeCCCHHHHHHHHHHHHHHhhccCCcE
Q 019322 232 IRVDGNDALAIYSAVHAAREMAIGEGRPI 260 (343)
Q Consensus 232 ~~VdG~d~~~v~~a~~~a~~~~r~~~gP~ 260 (343)
++..|.|.+++..++++.+..+|+..|.+
T Consensus 5 irfrgddleafekalkemirqarkfagtv 33 (85)
T 2kl8_A 5 IRFRGDDLEAFEKALKEMIRQARKFAGTV 33 (85)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTTTCEE
T ss_pred eeecCCcHHHHHHHHHHHHHHHHhhcceE
Confidence 45678899999999999999999887743
No 98
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=43.88 E-value=64 Score=27.85 Aligned_cols=82 Identities=22% Similarity=0.259 Sum_probs=47.8
Q ss_pred CCeEEEEeCccccCcchHHHHHHHHHhC-CCC--EEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCC---C
Q 019322 165 DACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---D 238 (343)
Q Consensus 165 ~~~vv~~~GDG~~~eG~~~Eal~~A~~~-~Lp--vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---d 238 (343)
.+++|.+.|.|+.. +++--+... ++| |+.||.|+.-. .-.++|+.+|+|++.++-. +
T Consensus 8 ~ri~vl~SG~gsnl-----~all~~~~~~~l~~~I~~Visn~~~a------------~~l~~A~~~gIp~~~~~~~~~~~ 70 (209)
T 4ds3_A 8 NRVVIFISGGGSNM-----EALIRAAQAPGFPAEIVAVFSDKAEA------------GGLAKAEAAGIATQVFKRKDFAS 70 (209)
T ss_dssp EEEEEEESSCCHHH-----HHHHHHHTSTTCSEEEEEEEESCTTC------------THHHHHHHTTCCEEECCGGGSSS
T ss_pred ccEEEEEECCcHHH-----HHHHHHHHcCCCCcEEEEEEECCccc------------HHHHHHHHcCCCEEEeCccccCC
Confidence 46788888888774 334444433 354 67777764211 1236899999999988632 3
Q ss_pred HHHHHHHHHHHHHHhhccCCcEEEEEEEe
Q 019322 239 ALAIYSAVHAAREMAIGEGRPILIEALTY 267 (343)
Q Consensus 239 ~~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 267 (343)
..+..+.+.+.++. .+|=+|.+.-|
T Consensus 71 r~~~d~~~~~~l~~----~~~Dliv~agy 95 (209)
T 4ds3_A 71 KEAHEDAILAALDV----LKPDIICLAGY 95 (209)
T ss_dssp HHHHHHHHHHHHHH----HCCSEEEESSC
T ss_pred HHHHHHHHHHHHHh----cCCCEEEEecc
Confidence 44444444444442 35666655544
No 99
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=43.26 E-value=64 Score=26.78 Aligned_cols=71 Identities=10% Similarity=0.034 Sum_probs=44.7
Q ss_pred EEEEEEcCCCcccccc--cc--ccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEE
Q 019322 196 VIFICRNNGWAISTPI--SD--QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (343)
Q Consensus 196 vi~vv~nN~~~~~~~~--~~--~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t 266 (343)
+.+||+|-.|...+.. .. ......+.+.++.+|+.+...+--+..++...+++..++.......++|.+..
T Consensus 35 ~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~dh~~~dc~vv~il 109 (167)
T 1pyo_A 35 LALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVLCDQTAQEMQEKLQNFAQLPAHRVTDSCIVALL 109 (167)
T ss_dssp EEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHHTCGGGGTSSEEEEEEE
T ss_pred EEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHhhhhhhccCCCEEEEEeC
Confidence 5566655556533211 11 11223577889999999998888888999998887754211234567776654
No 100
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=42.67 E-value=84 Score=24.82 Aligned_cols=61 Identities=3% Similarity=0.067 Sum_probs=39.0
Q ss_pred CCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhcc
Q 019322 192 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGE 256 (343)
Q Consensus 192 ~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~ 256 (343)
.+.|+|+|++--.. ..............++.+|++++.+...+-..+.+.+....+.+...
T Consensus 110 ~~~p~ilv~nK~Dl----~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~~~~~~~ 170 (181)
T 3t5g_A 110 VQIPIMLVGNKKDL----HMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKM 170 (181)
T ss_dssp --CCEEEEEECTTC----TTTCCSCHHHHHHHHHHTTCEEEECCTTSHHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECccc----hhcceecHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 36788777643221 11122223446677888999999999888888888887777665443
No 101
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=40.53 E-value=1e+02 Score=24.76 Aligned_cols=59 Identities=15% Similarity=0.131 Sum_probs=36.8
Q ss_pred CCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeC-CCHHHHHHHHHHHHHHhh
Q 019322 192 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG-NDALAIYSAVHAAREMAI 254 (343)
Q Consensus 192 ~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG-~d~~~v~~a~~~a~~~~r 254 (343)
.+.|+|+|.+--.. ............+.++.+|++.+.+.. .+-..+...+....+.++
T Consensus 126 ~~~piilv~nK~Dl----~~~~~v~~~~~~~~~~~~~~~~~e~Sa~~~g~gv~~lf~~l~~~i~ 185 (187)
T 3c5c_A 126 RSIPALLLGNKLDM----AQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREAR 185 (187)
T ss_dssp CCCCEEEEEECGGG----GGGCSSCHHHHHHHHHHHTCEEEECCSSSCSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECcch----hhcCccCHHHHHHHHHHcCCcEEEEeecCccccHHHHHHHHHHHHh
Confidence 46788777652221 111122223456677888999999988 677777777777666543
No 102
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=39.18 E-value=1e+02 Score=27.58 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=28.3
Q ss_pred EEEeCcccc--CcchHHHHHHHHHhCCCCEEEEEEcC
Q 019322 169 VTYFGDGGT--SEGDFHAALNFSAVTEAPVIFICRNN 203 (343)
Q Consensus 169 v~~~GDG~~--~eG~~~Eal~~A~~~~Lpvi~vv~nN 203 (343)
|+|--||+. ..|.+.-+|.+|..++ .+.|+|.+.
T Consensus 3 i~ir~Da~~~IG~GHvmRcl~LA~~l~-~v~F~~~~~ 38 (282)
T 3hbm_A 3 VLFRSDSSSQIGFGHIKRDLVLAKQYS-DVSFACLPL 38 (282)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTTCS-SEEEEECCC
T ss_pred EEEEEecCCCccccHHHHHHHHHHHHH-hCEEEEecC
Confidence 567778887 5888999999999998 999998654
No 103
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=37.60 E-value=50 Score=28.66 Aligned_cols=81 Identities=17% Similarity=0.166 Sum_probs=44.7
Q ss_pred CCCeEEEEeCccccCcchHHHHHHHHHhC-CCC--EEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCCCHH
Q 019322 164 KDACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDAL 240 (343)
Q Consensus 164 ~~~~vv~~~GDG~~~eG~~~Eal~~A~~~-~Lp--vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~ 240 (343)
+.+++|.+.|.|+.. +++--+... ++| |+.|+.|+.-+ .-.++|+.+|+|++.++-.+..
T Consensus 8 ~~ri~vl~SG~gsnl-----~all~~~~~~~~~~~I~~Vis~~~~a------------~~l~~A~~~gIp~~~~~~~~~~ 70 (215)
T 3kcq_A 8 ELRVGVLISGRGSNL-----EALAKAFSTEESSVVISCVISNNAEA------------RGLLIAQSYGIPTFVVKRKPLD 70 (215)
T ss_dssp CEEEEEEESSCCHHH-----HHHHHHTCCC-CSEEEEEEEESCTTC------------THHHHHHHTTCCEEECCBTTBC
T ss_pred CCEEEEEEECCcHHH-----HHHHHHHHcCCCCcEEEEEEeCCcch------------HHHHHHHHcCCCEEEeCcccCC
Confidence 346788889988774 334333333 344 67777764211 1246899999999987643321
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEEe
Q 019322 241 AIYSAVHAAREMAIGEGRPILIEALTY 267 (343)
Q Consensus 241 ~v~~a~~~a~~~~r~~~gP~lIe~~t~ 267 (343)
. +.+.+.++. ..|=+|.+.-|
T Consensus 71 ~--~~~~~~L~~----~~~Dlivlagy 91 (215)
T 3kcq_A 71 I--EHISTVLRE----HDVDLVCLAGF 91 (215)
T ss_dssp H--HHHHHHHHH----TTCSEEEESSC
T ss_pred h--HHHHHHHHH----hCCCEEEEeCC
Confidence 1 222223321 35666665555
No 104
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=37.19 E-value=92 Score=26.94 Aligned_cols=81 Identities=11% Similarity=0.066 Sum_probs=46.2
Q ss_pred CeEEEEeCccccCcchHHHHHHHHHhCCC--CEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCC---CHH
Q 019322 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DAL 240 (343)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~L--pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---d~~ 240 (343)
+++|.+.|.|+.. +++--+...++ .|+.|+.|+.- ..-.++|+.+|+|++.++-. +-.
T Consensus 7 riavl~SG~Gsnl-----~all~~~~~~~~~eI~~Vis~~~~------------a~~~~~A~~~gIp~~~~~~~~~~~r~ 69 (215)
T 3tqr_A 7 PIVVLISGNGTNL-----QAIIGAIQKGLAIEIRAVISNRAD------------AYGLKRAQQADIPTHIIPHEEFPSRT 69 (215)
T ss_dssp EEEEEESSCCHHH-----HHHHHHHHTTCSEEEEEEEESCTT------------CHHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred EEEEEEeCCcHHH-----HHHHHHHHcCCCCEEEEEEeCCcc------------hHHHHHHHHcCCCEEEeCccccCchh
Confidence 5667777877764 44544444335 46777776421 11246899999999987632 223
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEEe
Q 019322 241 AIYSAVHAAREMAIGEGRPILIEALTY 267 (343)
Q Consensus 241 ~v~~a~~~a~~~~r~~~gP~lIe~~t~ 267 (343)
+..+.+.+.++ ...|=+|.+.-|
T Consensus 70 ~~d~~~~~~l~----~~~~Dliv~agy 92 (215)
T 3tqr_A 70 DFESTLQKTID----HYDPKLIVLAGF 92 (215)
T ss_dssp HHHHHHHHHHH----TTCCSEEEESSC
T ss_pred HhHHHHHHHHH----hcCCCEEEEccc
Confidence 33344444443 246766666555
No 105
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=36.66 E-value=1.1e+02 Score=27.83 Aligned_cols=81 Identities=10% Similarity=0.009 Sum_probs=46.2
Q ss_pred CCCeEEEEeCccccCcchHHHHHHHHHhCC-CC--EEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCC--C
Q 019322 164 KDACAVTYFGDGGTSEGDFHAALNFSAVTE-AP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN--D 238 (343)
Q Consensus 164 ~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~-Lp--vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~--d 238 (343)
+.+++|.+.|.|+. .++|-.+...+ +| |+.||.|+. +...+|+.+|+|++.++-. +
T Consensus 105 ~~ri~vl~Sg~g~n-----l~~ll~~~~~g~l~~~I~~Visn~~--------------~~~~~A~~~gIp~~~~~~~~~~ 165 (302)
T 3o1l_A 105 KKRVVLMASRESHC-----LADLLHRWHSDELDCDIACVISNHQ--------------DLRSMVEWHDIPYYHVPVDPKD 165 (302)
T ss_dssp CCEEEEEECSCCHH-----HHHHHHHHHTTCSCSEEEEEEESSS--------------TTHHHHHTTTCCEEECCCCSSC
T ss_pred CcEEEEEEeCCchh-----HHHHHHHHHCCCCCcEEEEEEECcH--------------HHHHHHHHcCCCEEEcCCCcCC
Confidence 34567777777654 45565555443 55 677777652 2446789999999988421 2
Q ss_pred HHHHHHHHHHHHHHhhccCCcEEEEEEEe
Q 019322 239 ALAIYSAVHAAREMAIGEGRPILIEALTY 267 (343)
Q Consensus 239 ~~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 267 (343)
-.+..+.+.+.++. .+|=+|.+.-|
T Consensus 166 r~~~~~~~~~~l~~----~~~DliVlagy 190 (302)
T 3o1l_A 166 KEPAFAEVSRLVGH----HQADVVVLARY 190 (302)
T ss_dssp CHHHHHHHHHHHHH----TTCSEEEESSC
T ss_pred HHHHHHHHHHHHHH----hCCCEEEHhHh
Confidence 22233334344432 35666655444
No 106
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=36.57 E-value=95 Score=26.61 Aligned_cols=82 Identities=12% Similarity=0.068 Sum_probs=47.6
Q ss_pred CeEEEEeCccccCcchHHHHHHHHHhCCC--CEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCC---CHH
Q 019322 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DAL 240 (343)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~L--pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---d~~ 240 (343)
+++|++.|.|++.+. .+......++ .++.|+.|+. .....++|+.+|+|++.++-. +.+
T Consensus 5 ki~vl~sG~g~~~~~----~l~~l~~~~l~~~I~~Vit~~~------------~~~v~~~A~~~gIp~~~~~~~~~~~~~ 68 (212)
T 3av3_A 5 RLAVFASGSGTNFQA----IVDAAKRGDLPARVALLVCDRP------------GAKVIERAARENVPAFVFSPKDYPSKA 68 (212)
T ss_dssp EEEEECCSSCHHHHH----HHHHHHTTCCCEEEEEEEESST------------TCHHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred EEEEEEECCcHHHHH----HHHHHHhCCCCCeEEEEEeCCC------------CcHHHHHHHHcCCCEEEeCcccccchh
Confidence 577888898887432 2222223333 4667776641 124667899999999976532 333
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEEe
Q 019322 241 AIYSAVHAAREMAIGEGRPILIEALTY 267 (343)
Q Consensus 241 ~v~~a~~~a~~~~r~~~gP~lIe~~t~ 267 (343)
+..+.+.+.++. ..|-+|.+.-|
T Consensus 69 ~~~~~~~~~l~~----~~~Dliv~a~y 91 (212)
T 3av3_A 69 AFESEILRELKG----RQIDWIALAGY 91 (212)
T ss_dssp HHHHHHHHHHHH----TTCCEEEESSC
T ss_pred hhHHHHHHHHHh----cCCCEEEEchh
Confidence 444444444432 46777766555
No 107
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=35.06 E-value=50 Score=23.55 Aligned_cols=27 Identities=15% Similarity=0.260 Sum_probs=20.3
Q ss_pred CCcHHHHHHHHHHcCCCCHHHHHHHHHH
Q 019322 294 QDPVTRFRKWIESNGWWNGDIESELRSS 321 (343)
Q Consensus 294 ~dPi~~~~~~L~~~g~~~~~~~~~i~~~ 321 (343)
.-|+..=.++|..+| +|++||++.-++
T Consensus 32 ~sp~~~K~~FL~sKG-Lt~eEI~~Al~r 58 (70)
T 2w84_A 32 QSPLATRRAFLKKKG-LTDEEIDMAFQQ 58 (70)
T ss_dssp GSCHHHHHHHHHHTT-CCHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHcC-CCHHHHHHHHHH
Confidence 357888889999999 588887655443
No 108
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=35.01 E-value=1.4e+02 Score=25.73 Aligned_cols=81 Identities=20% Similarity=0.091 Sum_probs=46.8
Q ss_pred CeEEEEeCccccCcchHHHHHHHHHhCCC--CEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeC---CCHH
Q 019322 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG---NDAL 240 (343)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~L--pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG---~d~~ 240 (343)
+++|.+.|-|+.. +++--+...++ .|+.|+.|+. . ...++|+.+|+|++.++= .+-+
T Consensus 14 ri~vl~SG~gsnl-----~all~~~~~~~~~eI~~Vis~~~-a------------~~~~~A~~~gIp~~~~~~~~~~~r~ 75 (215)
T 3da8_A 14 RLVVLASGTGSLL-----RSLLDAAVGDYPARVVAVGVDRE-C------------RAAEIAAEASVPVFTVRLADHPSRD 75 (215)
T ss_dssp EEEEEESSCCHHH-----HHHHHHSSTTCSEEEEEEEESSC-C------------HHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred EEEEEEeCChHHH-----HHHHHHHhccCCCeEEEEEeCCc-h------------HHHHHHHHcCCCEEEeCcccccchh
Confidence 4566666877664 44443332245 4677776653 1 135789999999999852 2233
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEEec
Q 019322 241 AIYSAVHAAREMAIGEGRPILIEALTYR 268 (343)
Q Consensus 241 ~v~~a~~~a~~~~r~~~gP~lIe~~t~R 268 (343)
+..+.+.+.++ .-+|=+|.+.-|.
T Consensus 76 ~~d~~~~~~l~----~~~~Dlivlagy~ 99 (215)
T 3da8_A 76 AWDVAITAATA----AHEPDLVVSAGFM 99 (215)
T ss_dssp HHHHHHHHHHH----TTCCSEEEEEECC
T ss_pred hhhHHHHHHHH----hhCCCEEEEcCch
Confidence 44444444443 2467777776663
No 109
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=35.00 E-value=1.8e+02 Score=23.50 Aligned_cols=58 Identities=7% Similarity=0.107 Sum_probs=36.3
Q ss_pred CCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhh
Q 019322 193 EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI 254 (343)
Q Consensus 193 ~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r 254 (343)
+.|+|+|++--.. . .............+..+|++++.+...+-..+.+.+....+.+.
T Consensus 129 ~~piilv~nK~Dl--~--~~~~v~~~~~~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~~~i~ 186 (201)
T 3oes_A 129 RVPVVLVGNKADL--S--PEREVQAVEGKKLAESWGATFMESSARENQLTQGIFTKVIQEIA 186 (201)
T ss_dssp CCCEEEEEECTTC--G--GGCCSCHHHHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECccC--c--cccccCHHHHHHHHHHhCCeEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 5688777643221 1 11222223455677888999999988877777777776665543
No 110
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=34.04 E-value=82 Score=26.39 Aligned_cols=70 Identities=10% Similarity=0.017 Sum_probs=42.6
Q ss_pred CEEEEEEcCCCcccccccc--ccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 019322 195 PVIFICRNNGWAISTPISD--QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 265 (343)
Q Consensus 195 pvi~vv~nN~~~~~~~~~~--~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~ 265 (343)
.+.+||.|..|.-. +... ......+.+.++.+|+.+....--+..++.+++++..++....+..+++-+.
T Consensus 44 g~ALIInn~~f~~~-~~R~G~~~Da~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~f~~~~d~~~~d~~v~~~ 115 (178)
T 2h54_A 44 RLALIICNEEFDSI-PRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTELEAFAHRPEHKTSDSTFLVF 115 (178)
T ss_dssp CEEEEEECCCCSSS-CCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTCGGGGGCSCEEEEE
T ss_pred CEEEEEehhhcCCC-ccCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhhhhcCCCCEEEEEE
Confidence 35667777777421 1111 1112357788999999999888788899988888765321112344555443
No 111
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=33.46 E-value=1.2e+02 Score=26.18 Aligned_cols=81 Identities=15% Similarity=0.074 Sum_probs=47.9
Q ss_pred CeEEEEeCccccCcchHHHHHHHHHhCC-CC--EEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeC---CCH
Q 019322 166 ACAVTYFGDGGTSEGDFHAALNFSAVTE-AP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG---NDA 239 (343)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~-Lp--vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG---~d~ 239 (343)
+++|.+.|-|+ ..++|--+...+ +| |+.||.|+. .....++|+.+|+|++.++- .+.
T Consensus 4 riavl~Sg~Gs-----nl~ali~~~~~~~l~~eI~~Visn~~------------~a~v~~~A~~~gIp~~~~~~~~~~~r 66 (211)
T 3p9x_A 4 RVAIFASGSGT-----NAEAIIQSQKAGQLPCEVALLITDKP------------GAKVVERVKVHEIPVCALDPKTYPSK 66 (211)
T ss_dssp EEEEECCTTCH-----HHHHHHHHHHTTCCSSEEEEEEESCS------------SSHHHHHHHTTTCCEEECCGGGSSSH
T ss_pred EEEEEEeCCch-----HHHHHHHHHHcCCCCcEEEEEEECCC------------CcHHHHHHHHcCCCEEEeChhhcCch
Confidence 45566666554 456666665443 54 777777652 12466789999999987753 233
Q ss_pred HHHHHHHHHHHHHhhccCCcEEEEEEEe
Q 019322 240 LAIYSAVHAAREMAIGEGRPILIEALTY 267 (343)
Q Consensus 240 ~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 267 (343)
++....+.+.++. ..|=+|.+.-|
T Consensus 67 ~~~d~~~~~~l~~----~~~Dliv~agy 90 (211)
T 3p9x_A 67 EAYEIEVVQQLKE----KQIDFVVLAGY 90 (211)
T ss_dssp HHHHHHHHHHHHH----TTCCEEEESSC
T ss_pred hhhHHHHHHHHHh----cCCCEEEEeCc
Confidence 3333444444432 46777766555
No 112
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=33.07 E-value=1.6e+02 Score=22.36 Aligned_cols=58 Identities=9% Similarity=0.139 Sum_probs=36.0
Q ss_pred CCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHh
Q 019322 192 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA 253 (343)
Q Consensus 192 ~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~ 253 (343)
.+.|+++|++--. . ..............++.+|++++.+...+-..+.+.+....+.+
T Consensus 107 ~~~piilv~nK~D--l--~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~l~~~~ 164 (167)
T 1kao_A 107 EKVPVILVGNKVD--L--ESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164 (167)
T ss_dssp SCCCEEEEEECGG--G--GGGCCSCHHHHHHHHHHHTSCEEEECTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCc--c--cccccCCHHHHHHHHHHhCCCEEEecCCCCcCHHHHHHHHHHHH
Confidence 4678877764221 1 11112222344566777899999999888877777777665543
No 113
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=32.67 E-value=77 Score=20.50 Aligned_cols=8 Identities=0% Similarity=0.215 Sum_probs=4.4
Q ss_pred HHHHHHHH
Q 019322 284 VDEIEWWR 291 (343)
Q Consensus 284 ~~e~~~~~ 291 (343)
..+++.|+
T Consensus 6 ~~dle~~K 13 (45)
T 1use_A 6 YSDLQRVK 13 (45)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 45566664
No 114
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=32.27 E-value=2.3e+02 Score=24.17 Aligned_cols=81 Identities=17% Similarity=0.116 Sum_probs=47.4
Q ss_pred CeEEEEeCccccCcchHHHHHHHHHhC---CCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeC---CCH
Q 019322 166 ACAVTYFGDGGTSEGDFHAALNFSAVT---EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG---NDA 239 (343)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~---~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG---~d~ 239 (343)
+++|.+.|.|+.. ++|--+... +..|+.||.|+.- ....++|+.+|+|++.++- .+-
T Consensus 2 riaVl~SG~Gs~L-----~aLi~~~~~~~~~~~I~~Vvs~~~~------------~~~~~~A~~~gIp~~~~~~~~~~~r 64 (209)
T 1meo_A 2 RVAVLISGTGSNL-----QALIDSTREPNSSAQIDIVISNKAA------------VAGLDKAERAGIPTRVINHKLYKNR 64 (209)
T ss_dssp EEEEEESSSCTTH-----HHHHHHHHSTTCSCEEEEEEESSTT------------CHHHHHHHHTTCCEEECCGGGSSSH
T ss_pred eEEEEEECCchHH-----HHHHHHHhcCCCCcEEEEEEeCCCC------------hHHHHHHHHcCCCEEEECccccCch
Confidence 4678888888764 334333322 2356777776521 1124689999999997763 233
Q ss_pred HHHHHHHHHHHHHhhccCCcEEEEEEEe
Q 019322 240 LAIYSAVHAAREMAIGEGRPILIEALTY 267 (343)
Q Consensus 240 ~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 267 (343)
.+..+.+.+.++. -.|-+|.+.-|
T Consensus 65 ~~~~~~~~~~l~~----~~~Dliv~a~y 88 (209)
T 1meo_A 65 VEFDSAIDLVLEE----FSIDIVCLAGF 88 (209)
T ss_dssp HHHHHHHHHHHHH----TTCCEEEEESC
T ss_pred hhhhHHHHHHHHh----cCCCEEEEcch
Confidence 3333444444432 46777777666
No 115
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=32.19 E-value=59 Score=21.93 Aligned_cols=25 Identities=16% Similarity=0.264 Sum_probs=19.6
Q ss_pred CCcHHHHHHHHHHcCCCCHHHHHHHH
Q 019322 294 QDPVTRFRKWIESNGWWNGDIESELR 319 (343)
Q Consensus 294 ~dPi~~~~~~L~~~g~~~~~~~~~i~ 319 (343)
.-|+..=..+|..+| +|++||++.-
T Consensus 27 ~sp~~~K~~FL~sKG-Lt~~EI~~Al 51 (54)
T 3ff5_A 27 QSPLATRRAFLKKKG-LTDEEIDLAF 51 (54)
T ss_dssp GSCHHHHHHHHHHTT-CCHHHHHHHH
T ss_pred cCCHHHHHHHHHHcC-CCHHHHHHHH
Confidence 457888889999999 5998887553
No 116
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=31.60 E-value=65 Score=26.31 Aligned_cols=99 Identities=11% Similarity=0.039 Sum_probs=52.7
Q ss_pred cCchHHHHHHHHhcccc------cCCCeEEEEeCccccCcch--HHHHHHHHHhCCCCEEEEEEcCCCccccccccccCC
Q 019322 146 ATQLPHAVGAAYALKMD------RKDACAVTYFGDGGTSEGD--FHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS 217 (343)
Q Consensus 146 G~~lp~A~G~A~a~k~~------~~~~~vv~~~GDG~~~eG~--~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~ 217 (343)
|..+..|+-.|+..-+. .....+++++.||..+.+. ..+++..+...++++..|-.-+... .....
T Consensus 85 ~T~~~~al~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~~------~~~~~ 158 (198)
T 1n3y_A 85 FTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQ------NRNSW 158 (198)
T ss_dssp CBCHHHHHHHHHTTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGG------SSTTH
T ss_pred CchHHHHHHHHHHHHhCcccCCCCCCceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEcccccc------ccccH
Confidence 44455555555522111 2245789999999886433 3666777777777765553322110 00011
Q ss_pred ccHHHhHhhcCc-eEEEEeCCCHHHHHHHHHHHHHH
Q 019322 218 DGAVVKGRAYGV-RSIRVDGNDALAIYSAVHAAREM 252 (343)
Q Consensus 218 ~~~~~~a~a~G~-~~~~VdG~d~~~v~~a~~~a~~~ 252 (343)
..+..+|..-|- .++.++ |+.++..++++..+.
T Consensus 159 ~~L~~iA~~~~g~~~~~~~--~~~~l~~~~~~i~~~ 192 (198)
T 1n3y_A 159 KELNDIASKPSQEHIFKVE--DFDALKDIQNQLKEK 192 (198)
T ss_dssp HHHHHHSCSSSGGGEEEES--SGGGGGGGHHHHHHH
T ss_pred HHHHHHHcCCCcccEEEeC--CHHHHHHHHHHHHhh
Confidence 234555554443 457776 566666666554443
No 117
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=30.83 E-value=1.9e+02 Score=24.72 Aligned_cols=82 Identities=10% Similarity=0.079 Sum_probs=45.5
Q ss_pred CeEEEEeCccccCcchHHHHHHHHHhCCC--CEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCC---CHH
Q 019322 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DAL 240 (343)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~L--pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---d~~ 240 (343)
+++|.+.|.|++.+ ..+......++ .++.|+.|+. .....++|+.+|+|++.++-. +-+
T Consensus 3 rI~vl~SG~g~~~~----~~l~~l~~~~~~~~i~~Vvs~~~------------~~~~~~~A~~~gIp~~~~~~~~~~~r~ 66 (216)
T 2ywr_A 3 KIGVLVSGRGSNLQ----AIIDAIESGKVNASIELVISDNP------------KAYAIERCKKHNVECKVIQRKEFPSKK 66 (216)
T ss_dssp EEEEEECSCCHHHH----HHHHHHHTTSSCEEEEEEEESCT------------TCHHHHHHHHHTCCEEECCGGGSSSHH
T ss_pred EEEEEEeCCcHHHH----HHHHHHHhCCCCCeEEEEEeCCC------------ChHHHHHHHHcCCCEEEeCcccccchh
Confidence 45666668887743 22222223345 4667776642 112567899999999986532 223
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEEe
Q 019322 241 AIYSAVHAAREMAIGEGRPILIEALTY 267 (343)
Q Consensus 241 ~v~~a~~~a~~~~r~~~gP~lIe~~t~ 267 (343)
+..+.+.+.++. .+|-+|.+.-|
T Consensus 67 ~~~~~~~~~l~~----~~~Dliv~a~y 89 (216)
T 2ywr_A 67 EFEERMALELKK----KGVELVVLAGF 89 (216)
T ss_dssp HHHHHHHHHHHH----TTCCEEEESSC
T ss_pred hhhHHHHHHHHh----cCCCEEEEeCc
Confidence 333334344432 46777766655
No 118
>3ygs_P Procaspase 9; apoptosis, caspase activation, caspase recruitment, recognition complex; 2.50A {Homo sapiens} SCOP: a.77.1.3
Probab=30.39 E-value=40 Score=25.22 Aligned_cols=39 Identities=10% Similarity=0.177 Sum_probs=29.2
Q ss_pred HHHHHHHcCCCCHHHHHHHHHH----HHHHHHHHHHHHhhcCC
Q 019322 300 FRKWIESNGWWNGDIESELRSS----VRKQVILVSLTISKYGL 338 (343)
Q Consensus 300 ~~~~L~~~g~~~~~~~~~i~~~----~~~~v~~a~~~a~~~~~ 338 (343)
+-.+|+++|++|+++.+.|+.+ -++.+.+-+....+-|+
T Consensus 26 vld~L~~~~vlt~~~~e~I~~~~~~t~~~~ar~Lld~L~~rG~ 68 (97)
T 3ygs_P 26 LWDVLLSRELFRPHMIEDIQRAGSGSRRDQARQLIIDLETRGS 68 (97)
T ss_dssp THHHHHHTTSSCHHHHHHHHTSTTCCHHHHHHHHHHHHTTSCT
T ss_pred HHHHHHHcCCCCHHHHHHHHhccCCChHHHHHHHHHHHHHcCh
Confidence 5689999999999999999975 45566665555555554
No 119
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=30.16 E-value=59 Score=23.78 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=22.1
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHH
Q 019322 297 VTRFRKWIESNGWWNGDIESELRSS 321 (343)
Q Consensus 297 i~~~~~~L~~~g~~~~~~~~~i~~~ 321 (343)
+..+-++|.++|++|+++.+.|.++
T Consensus 24 v~~lld~L~~~~vlt~~~~e~I~~~ 48 (94)
T 2p1h_A 24 TSYIMDHMISDGFLTISEEEKVRNE 48 (94)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHTS
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHcC
Confidence 5668899999999999999999875
No 120
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=29.68 E-value=58 Score=30.03 Aligned_cols=36 Identities=17% Similarity=0.017 Sum_probs=25.0
Q ss_pred CeEEEEeCccccCcchHHHHHHHHHhCCCCEEEE---EEcCCCcc
Q 019322 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI---CRNNGWAI 207 (343)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~v---v~nN~~~~ 207 (343)
...+++-|||++.. .+....+++|+|-| |+|+-...
T Consensus 95 d~L~~IGGdgS~~~------a~~l~~~~i~vigiPkTIDNDl~~t 133 (319)
T 4a3s_A 95 EGLVVIGGDGSYMG------AKKLTEHGFPCVGVPGTIDNDIPGT 133 (319)
T ss_dssp CEEEEEECTTHHHH------HHHHHHTTCCEEEEEEETTCCCTTC
T ss_pred CEEEEeCCcHHHHH------HHHHhccCCcEEEeeccccCCCCCC
Confidence 46889999999852 23334688999888 66665443
No 121
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=29.38 E-value=61 Score=29.99 Aligned_cols=36 Identities=19% Similarity=0.028 Sum_probs=24.1
Q ss_pred CeEEEEeCccccCcchHHHHHHHHHhCCCCEEEE---EEcCCCcc
Q 019322 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI---CRNNGWAI 207 (343)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~v---v~nN~~~~ 207 (343)
...|++-|||++.. .+.-+.+++|+|-| |+|+-.+.
T Consensus 96 d~LvvIGGdgS~~~------a~~L~~~~i~vvgiPkTIDNDl~~t 134 (320)
T 1pfk_A 96 DALVVIGGDGSYMG------AMRLTEMGFPCIGLPGTIDNDIKGT 134 (320)
T ss_dssp CEEEEEECHHHHHH------HHHHHHTTCCEEEEEBCTTCCCTTC
T ss_pred CEEEEECCCchHHH------HHHHHhhCCCEEEEeccccCCCCCC
Confidence 35778889999852 22223468999988 77775443
No 122
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=29.38 E-value=56 Score=29.68 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=28.4
Q ss_pred CCeEEEEeCc-----cccCcch---HHHHHHHHHhCCCCEEEEEEcCCC
Q 019322 165 DACAVTYFGD-----GGTSEGD---FHAALNFSAVTEAPVIFICRNNGW 205 (343)
Q Consensus 165 ~~~vv~~~GD-----G~~~eG~---~~Eal~~A~~~~Lpvi~vv~nN~~ 205 (343)
++.|+++.=| |++..-. +..++.+|...++|+|++++.-+.
T Consensus 120 G~~V~v~a~d~~~~gGs~g~~~~~K~~r~ie~A~~~~lPlI~l~dsgGa 168 (285)
T 2f9i_B 120 GMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGA 168 (285)
T ss_dssp TEEEEEEEECTTTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEECSC
T ss_pred CEEEEEEEEccccccCcCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCc
Confidence 4567777778 4443111 345677889999999999987775
No 123
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=28.67 E-value=1.2e+02 Score=24.06 Aligned_cols=54 Identities=11% Similarity=0.234 Sum_probs=29.7
Q ss_pred CCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeC---CCHHHHHHHHHHHH
Q 019322 192 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG---NDALAIYSAVHAAR 250 (343)
Q Consensus 192 ~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG---~d~~~v~~a~~~a~ 250 (343)
.+.|+++|++--... . .........+.++.+|++++.+.. ..+.++...+.+.+
T Consensus 125 ~~~p~ilv~nK~Dl~--~---~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~l~~~~ 181 (190)
T 3con_A 125 DDVPMVLVGNKCDLP--T---RTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREI 181 (190)
T ss_dssp SCCCEEEEEECTTCS--C---CCSCHHHHHHHHHHHTCCEEECCTTTCTTHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCcCC--c---ccCCHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHHH
Confidence 367888776532211 1 111223456677788999998764 44555554444433
No 124
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=28.30 E-value=66 Score=29.73 Aligned_cols=35 Identities=17% Similarity=-0.072 Sum_probs=23.4
Q ss_pred CeEEEEeCccccCcchHHHHHHHHHhCCCCEEEE---EEcCCCc
Q 019322 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI---CRNNGWA 206 (343)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~v---v~nN~~~ 206 (343)
...|++-|||++.. .+.-+.+++|+|-| |+||-.+
T Consensus 95 d~LvvIGGdgS~~~------a~~L~~~~i~vvgiPkTIDNDl~~ 132 (319)
T 1zxx_A 95 DAVVVIGGDGSYHG------ALQLTRHGFNSIGLPGTIDNDIPY 132 (319)
T ss_dssp CEEEEEECHHHHHH------HHHHHHTTCCEEEEEEETTCCCTT
T ss_pred CEEEEECCchHHHH------HHHHHHhCCCEEEEeecccCCCCC
Confidence 35778889999851 22233468999888 6666544
No 125
>2xf7_A GP23.1; viral protein; 1.61A {Bacillus phage SPP1} PDB: 2xf5_A 2xf6_A
Probab=28.22 E-value=65 Score=20.83 Aligned_cols=32 Identities=6% Similarity=0.144 Sum_probs=22.6
Q ss_pred HHHHHhCCCcHHHHHHHHHHcCCCCHHHHHHHH
Q 019322 287 IEWWRTTQDPVTRFRKWIESNGWWNGDIESELR 319 (343)
Q Consensus 287 ~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~ 319 (343)
.+.|+ ....+.-.-+.-+++|-+|++|.|+|-
T Consensus 11 ~D~W~-~GT~~~~~mR~AV~~G~iTQ~E~D~I~ 42 (51)
T 2xf7_A 11 LDSWL-DGTASEELLRVAVNAGDLTQEEADKIM 42 (51)
T ss_dssp HHHHH-HTCCCHHHHHHHHHHTSSCHHHHHHHH
T ss_pred HHHHh-cchhhHHHHHHHHhcCcccHHHHHHHH
Confidence 35776 355555554555788999999998874
No 126
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=27.45 E-value=1.5e+02 Score=24.40 Aligned_cols=48 Identities=10% Similarity=-0.014 Sum_probs=35.0
Q ss_pred ccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEE
Q 019322 218 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (343)
Q Consensus 218 ~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t 266 (343)
..+.+.++.+|+.+...+--+..++...+++..+. ......++|-+..
T Consensus 58 ~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~-dh~~~dc~vv~il 105 (164)
T 1qtn_A 58 GALTTTFEELHFEIKPHDDCTVEQIYEILKIYQLM-DHSNMDCFICCIL 105 (164)
T ss_dssp HHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHS-CCTTCSCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHHh-hccCCCEEEEEeC
Confidence 35778899999999998888889999999887432 1134556666544
No 127
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=27.11 E-value=1.3e+02 Score=23.24 Aligned_cols=54 Identities=11% Similarity=0.099 Sum_probs=29.9
Q ss_pred CCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHH
Q 019322 193 EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 250 (343)
Q Consensus 193 ~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~ 250 (343)
+.|+|+|.+--.. ..............++.+|++.+.+...+-..+.+.+....
T Consensus 109 ~~p~ilv~nK~Dl----~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~ 162 (169)
T 3q85_A 109 DLPVILVGNKSDL----ARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAV 162 (169)
T ss_dssp CCCEEEEEECTTC----GGGCCSCHHHHHHHHHHTTCEEEECBTTTTBSHHHHHHHHH
T ss_pred CCCEEEEeeCcch----hhcccCCHHHHHHHHHHcCCcEEEecCccCCCHHHHHHHHH
Confidence 6788877743221 11122223345567888899999886544333444444433
No 128
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=26.94 E-value=1.1e+02 Score=27.84 Aligned_cols=81 Identities=12% Similarity=-0.041 Sum_probs=45.2
Q ss_pred CCCeEEEEeCccccCcchHHHHHHHHHhC-CCC--EEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCC--C
Q 019322 164 KDACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN--D 238 (343)
Q Consensus 164 ~~~~vv~~~GDG~~~eG~~~Eal~~A~~~-~Lp--vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~--d 238 (343)
+.+++|.+.|.|+. .++|-.+... .+| +..||.|+. +...+|+.+|+|++.++-. +
T Consensus 95 ~~ri~vl~Sg~g~~-----l~~ll~~~~~g~l~~~i~~Visn~~--------------~~~~~A~~~gIp~~~~~~~~~~ 155 (292)
T 3lou_A 95 RPKVLIMVSKLEHC-----LADLLFRWKMGELKMDIVGIVSNHP--------------DFAPLAAQHGLPFRHFPITADT 155 (292)
T ss_dssp CCEEEEEECSCCHH-----HHHHHHHHHHTSSCCEEEEEEESSS--------------TTHHHHHHTTCCEEECCCCSSC
T ss_pred CCEEEEEEcCCCcC-----HHHHHHHHHcCCCCcEEEEEEeCcH--------------HHHHHHHHcCCCEEEeCCCcCC
Confidence 34567777777654 4555555443 354 677777652 2345688999999987522 2
Q ss_pred HHHHHHHHHHHHHHhhccCCcEEEEEEEe
Q 019322 239 ALAIYSAVHAAREMAIGEGRPILIEALTY 267 (343)
Q Consensus 239 ~~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 267 (343)
-.+..+.+.+.++. .+|=+|.+.-|
T Consensus 156 r~~~~~~~~~~l~~----~~~Dlivla~y 180 (292)
T 3lou_A 156 KAQQEAQWLDVFET----SGAELVILARY 180 (292)
T ss_dssp HHHHHHHHHHHHHH----HTCSEEEESSC
T ss_pred HHHHHHHHHHHHHH----hCCCEEEecCc
Confidence 33333334344432 24555555444
No 129
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=26.00 E-value=1.4e+02 Score=23.69 Aligned_cols=54 Identities=6% Similarity=0.085 Sum_probs=29.4
Q ss_pred CCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeC---CCHHHHHHHHHHHH
Q 019322 193 EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG---NDALAIYSAVHAAR 250 (343)
Q Consensus 193 ~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG---~d~~~v~~a~~~a~ 250 (343)
+.|+|+|++--. .. .............+..+|++++.+.. ..+.++...+.+.+
T Consensus 121 ~~p~ilv~nK~D--l~--~~~~~~~~~~~~~~~~~~~~~~~~Sa~~g~gv~~l~~~l~~~i 177 (196)
T 3tkl_A 121 NVNKLLVGNKCD--LT--TKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 177 (196)
T ss_dssp TCEEEEEEECTT--CT--TTCCSCHHHHHHHHHHTTCCEEEECTTTCTTHHHHHHHHHHHH
T ss_pred CCCEEEEEECcc--cc--cccccCHHHHHHHHHHcCCcEEEEeCCCCCCHHHHHHHHHHHH
Confidence 567777764222 11 11112223455677888999999865 44555554444433
No 130
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=25.90 E-value=1.8e+02 Score=20.55 Aligned_cols=40 Identities=20% Similarity=0.196 Sum_probs=27.3
Q ss_pred cHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHHHhh
Q 019322 296 PVTRFRKWIESNGW--WNGDIESELRSSVRKQVILVSLTISK 335 (343)
Q Consensus 296 Pi~~~~~~L~~~g~--~~~~~~~~i~~~~~~~v~~a~~~a~~ 335 (343)
|+..++.....-|+ ++++-.+.+-+.++-.+.+..++|-|
T Consensus 8 p~~~v~~iaes~Gi~~lsddaa~~LA~dvEyr~~eI~qeA~k 49 (70)
T 1taf_B 8 SAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAK 49 (70)
T ss_dssp CHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666667776 78888877777777766666665544
No 131
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=25.77 E-value=66 Score=29.33 Aligned_cols=82 Identities=11% Similarity=-0.073 Sum_probs=45.8
Q ss_pred EEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHH
Q 019322 169 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHA 248 (343)
Q Consensus 169 v~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~ 248 (343)
++|+|.+.|. +...++|.-+ +..|+.|+.|..-.. . ......+.++|+.+|+|++..+-.+-.++.+
T Consensus 3 ivf~gt~~fa-~~~L~~L~~~---~~~i~~Vvt~~d~~~----g-~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~---- 69 (305)
T 2bln_A 3 TVVFAYHDMG-CLGIEALLAA---GYEISAIFTHTDNPG----E-KAFYGSVARLAAERGIPVYAPDNVNHPLWVE---- 69 (305)
T ss_dssp EEEEECHHHH-HHHHHHHHHT---TCEEEEEECCCC-----------CCCCHHHHHHHHTCCEECCSCCCSHHHHH----
T ss_pred EEEEEcCHHH-HHHHHHHHHC---CCcEEEEEcCCCCCC----C-CcCccHHHHHHHHcCCCEECCCcCCcHHHHH----
Confidence 6778888775 2344554332 556777776532111 0 1223458889999999999887433222222
Q ss_pred HHHHhhccCCcEEEEEEEe
Q 019322 249 AREMAIGEGRPILIEALTY 267 (343)
Q Consensus 249 a~~~~r~~~gP~lIe~~t~ 267 (343)
.++ + -.|-+|.+.-|
T Consensus 70 ~l~---~-~~~Dliv~~~y 84 (305)
T 2bln_A 70 RIA---Q-LSPDVIFSFYY 84 (305)
T ss_dssp HHH---H-TCCSEEEEESC
T ss_pred HHH---h-cCCCEEEEecc
Confidence 222 1 35767766666
No 132
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=25.74 E-value=96 Score=24.14 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=35.7
Q ss_pred hHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhc--cCCcEEEEEEE
Q 019322 223 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIG--EGRPILIEALT 266 (343)
Q Consensus 223 ~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~--~~gP~lIe~~t 266 (343)
+...|++.++.+...|+.++.+.+++-++.+-. .+.|++|++..
T Consensus 11 KG~~~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~ 56 (120)
T 3ghf_A 11 KGSSFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSG 56 (120)
T ss_dssp CCCCCCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEE
T ss_pred EcCeeeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccc
Confidence 456688999999889999999999888776543 36799999864
No 133
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=25.47 E-value=1.5e+02 Score=26.45 Aligned_cols=70 Identities=7% Similarity=0.034 Sum_probs=43.9
Q ss_pred CEEEEEEcCCCccccc--ccc--ccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 019322 195 PVIFICRNNGWAISTP--ISD--QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 265 (343)
Q Consensus 195 pvi~vv~nN~~~~~~~--~~~--~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~ 265 (343)
.+.+||+|-.|...+. ... ......+.+.++.+|+.+...+--+..++.++++++.+. ...+..+++-+.
T Consensus 22 g~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~~~-~h~~~d~~vv~i 95 (278)
T 3od5_A 22 GIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTV-SHADADCFVCVF 95 (278)
T ss_dssp CEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHS-CCTTBSCEEEEE
T ss_pred CEEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhh-cccCCCEEEEEE
Confidence 3567777767764211 111 112245788899999999999888899999999986431 112344555443
No 134
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=24.94 E-value=2.6e+02 Score=24.14 Aligned_cols=82 Identities=17% Similarity=0.146 Sum_probs=44.4
Q ss_pred CeEEEEeCccccCcchHHHHHHHHHhCCC--CEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCC---CHH
Q 019322 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DAL 240 (343)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~L--pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---d~~ 240 (343)
+++|++.|.|++.+ ..+......++ .|+.||.|+. .....++|+.+|+|++.++-. +-+
T Consensus 24 rI~~l~SG~g~~~~----~~l~~l~~~~~~~~I~~Vvt~~~------------~~~~~~~A~~~gIp~~~~~~~~~~~r~ 87 (229)
T 3auf_A 24 RIGVLISGSGTNLQ----AILDGCREGRIPGRVAVVISDRA------------DAYGLERARRAGVDALHMDPAAYPSRT 87 (229)
T ss_dssp EEEEEESSCCHHHH----HHHHHHHTTSSSEEEEEEEESST------------TCHHHHHHHHTTCEEEECCGGGSSSHH
T ss_pred EEEEEEeCCcHHHH----HHHHHHHhCCCCCeEEEEEcCCC------------chHHHHHHHHcCCCEEEECcccccchh
Confidence 45555568887743 22222222333 4667776541 112467899999999987632 233
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEEe
Q 019322 241 AIYSAVHAAREMAIGEGRPILIEALTY 267 (343)
Q Consensus 241 ~v~~a~~~a~~~~r~~~gP~lIe~~t~ 267 (343)
+....+.+.++. -+|-+|.+.-|
T Consensus 88 ~~~~~~~~~l~~----~~~Dliv~agy 110 (229)
T 3auf_A 88 AFDAALAERLQA----YGVDLVCLAGY 110 (229)
T ss_dssp HHHHHHHHHHHH----TTCSEEEESSC
T ss_pred hccHHHHHHHHh----cCCCEEEEcCh
Confidence 333334344432 46767766555
No 135
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=24.87 E-value=1.3e+02 Score=24.13 Aligned_cols=70 Identities=11% Similarity=0.060 Sum_probs=43.5
Q ss_pred EEEEEEcCCCccccccc--c--ccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEE
Q 019322 196 VIFICRNNGWAISTPIS--D--QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (343)
Q Consensus 196 vi~vv~nN~~~~~~~~~--~--~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t 266 (343)
+.+||+|..|...+... . ......+.+.++.+|+.+...+--+..++.+.+++..+.- .....++|-+..
T Consensus 18 ~alIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~d-h~~~dc~vv~il 91 (146)
T 2dko_A 18 LCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKED-HSKRSSFVCVLL 91 (146)
T ss_dssp EEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHSC-CTTEEEEEEEEE
T ss_pred EEEEEeccccCCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHHHHhh-cCCCCeEEEEec
Confidence 55666665665432111 1 1122457788999999999888888899999888765421 123355665544
No 136
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=24.16 E-value=64 Score=31.96 Aligned_cols=14 Identities=21% Similarity=0.112 Sum_probs=10.3
Q ss_pred CCCEEEEEEcCCCc
Q 019322 193 EAPVIFICRNNGWA 206 (343)
Q Consensus 193 ~Lpvi~vv~nN~~~ 206 (343)
.+|.|-|+.+...+
T Consensus 163 ~iP~Isvv~gp~~G 176 (522)
T 1x0u_A 163 VIPQITIMAGPAAG 176 (522)
T ss_dssp TSCEEEEECSEEEG
T ss_pred CCcEEEEEcCCCch
Confidence 36888888877654
No 137
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=24.14 E-value=1e+02 Score=27.51 Aligned_cols=33 Identities=9% Similarity=0.046 Sum_probs=24.8
Q ss_pred ccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHH
Q 019322 218 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 250 (343)
Q Consensus 218 ~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~ 250 (343)
..+.+.++.+|+.+....--+..++.+++++..
T Consensus 59 ~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~ 91 (272)
T 1m72_A 59 DNLSKVLKTLGFKVTVFPNLKSEEINKFIQQTA 91 (272)
T ss_dssp HHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEecCcCHHHHHHHHHHHH
Confidence 356777888888888877777788887777654
No 138
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=24.11 E-value=73 Score=31.56 Aligned_cols=13 Identities=23% Similarity=0.120 Sum_probs=9.5
Q ss_pred CCEEEEEEcCCCc
Q 019322 194 APVIFICRNNGWA 206 (343)
Q Consensus 194 Lpvi~vv~nN~~~ 206 (343)
+|.|-|+.+...+
T Consensus 168 iP~Isvv~gp~~G 180 (523)
T 1on3_A 168 VPQIAIIAGPCAG 180 (523)
T ss_dssp SCEEEEEEEEEES
T ss_pred CCEEEEEcCCCch
Confidence 6888888777654
No 139
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=23.90 E-value=1.7e+02 Score=24.57 Aligned_cols=83 Identities=10% Similarity=0.001 Sum_probs=54.4
Q ss_pred EEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCccccccc--------cccCCccHHHhHhhcCceEEEEeCCCH
Q 019322 168 AVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS--------DQFRSDGAVVKGRAYGVRSIRVDGNDA 239 (343)
Q Consensus 168 vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~--------~~~~~~~~~~~a~a~G~~~~~VdG~d~ 239 (343)
-+.++|=+....+ .-.++...++++.+...+|......-.. -.....-..+.|+.+|++++.+.. ..
T Consensus 96 kIavvg~~~~~~~----~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~~~~~A~~~Gl~~vli~s-g~ 170 (196)
T 2q5c_A 96 ELALIAYKHSIVD----KHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKTVTDEAIKQGLYGETINS-GE 170 (196)
T ss_dssp EEEEEEESSCSSC----HHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHHHHHHHHHTTCEEEECCC-CH
T ss_pred cEEEEeCcchhhH----HHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHHHHHHHHHcCCcEEEEec-CH
Confidence 4666666666544 2457778888887776666433221110 011222356789999999999983 58
Q ss_pred HHHHHHHHHHHHHhhc
Q 019322 240 LAIYSAVHAAREMAIG 255 (343)
Q Consensus 240 ~~v~~a~~~a~~~~r~ 255 (343)
+++..|+.+|++-++.
T Consensus 171 eSI~~Ai~eA~~l~~~ 186 (196)
T 2q5c_A 171 ESLRRAIEEALNLIEV 186 (196)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8999999999876654
No 140
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=23.79 E-value=1.3e+02 Score=26.43 Aligned_cols=56 Identities=11% Similarity=0.017 Sum_probs=37.6
Q ss_pred EEEEEEcCCCccccc--ccc--ccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHH
Q 019322 196 VIFICRNNGWAISTP--ISD--QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAARE 251 (343)
Q Consensus 196 vi~vv~nN~~~~~~~--~~~--~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~ 251 (343)
+.+||.|-.|..... ... ......+.+.++.+|+.+....--+..++.+++++..+
T Consensus 18 ~aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~ 77 (250)
T 2j32_A 18 LCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSK 77 (250)
T ss_dssp EEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHT
T ss_pred EEEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH
Confidence 556666656754311 111 11223578889999999999888888999998887764
No 141
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=23.78 E-value=1.5e+02 Score=26.67 Aligned_cols=81 Identities=10% Similarity=-0.017 Sum_probs=45.3
Q ss_pred CCCeEEEEeCccccCcchHHHHHHHHHhC-CCC--EEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCC--C
Q 019322 164 KDACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN--D 238 (343)
Q Consensus 164 ~~~~vv~~~GDG~~~eG~~~Eal~~A~~~-~Lp--vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~--d 238 (343)
+.+++|.+.|.|+. .++|-.+... .+| |+.||.|+. +...+|+.+|+|++.++-. +
T Consensus 90 ~~ri~vl~Sg~g~~-----l~~ll~~~~~g~l~~~i~~Visn~~--------------~~~~~A~~~gIp~~~~~~~~~~ 150 (286)
T 3n0v_A 90 RPKVVIMVSKADHC-----LNDLLYRQRIGQLGMDVVAVVSNHP--------------DLEPLAHWHKIPYYHFALDPKD 150 (286)
T ss_dssp CCEEEEEESSCCHH-----HHHHHHHHHTTSSCCEEEEEEESSS--------------TTHHHHHHTTCCEEECCCBTTB
T ss_pred CcEEEEEEeCCCCC-----HHHHHHHHHCCCCCcEEEEEEeCcH--------------HHHHHHHHcCCCEEEeCCCcCC
Confidence 34567777777644 4556555543 354 677777653 2345688999999987522 2
Q ss_pred HHHHHHHHHHHHHHhhccCCcEEEEEEEe
Q 019322 239 ALAIYSAVHAAREMAIGEGRPILIEALTY 267 (343)
Q Consensus 239 ~~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 267 (343)
-.+..+.+.+.++. .+|=+|.+.-|
T Consensus 151 r~~~~~~~~~~l~~----~~~Dlivla~y 175 (286)
T 3n0v_A 151 KPGQERKVLQVIEE----TGAELVILARY 175 (286)
T ss_dssp HHHHHHHHHHHHHH----HTCSEEEESSC
T ss_pred HHHHHHHHHHHHHh----cCCCEEEeccc
Confidence 23333333333332 24555555444
No 142
>3qyh_A CO-type nitrIle hydratase alpha subunit; cobalt, cysteine sulfinic acid, lyase; 2.00A {Pseudomonas putida} PDB: 3qyg_A 3qxe_A 3qz9_A 3qz5_A
Probab=23.68 E-value=55 Score=28.55 Aligned_cols=28 Identities=4% Similarity=0.048 Sum_probs=23.6
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHH
Q 019322 298 TRFRKWIESNGWWNGDIESELRSSVRKQ 325 (343)
Q Consensus 298 ~~~~~~L~~~g~~~~~~~~~i~~~~~~~ 325 (343)
..++..|+++|+++.++++.+.+.++.+
T Consensus 41 ~Al~~lL~eKG~i~~~~~~~~~~~~e~~ 68 (226)
T 3qyh_A 41 KALESLLIEKGLVDPAAMDLVVQTYEHK 68 (226)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHhc
Confidence 5688999999999999999888766544
No 143
>2e62_A Protein AT5G25060; CWF21 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Arabidopsis thaliana}
Probab=23.54 E-value=1.4e+02 Score=20.55 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=26.5
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q 019322 297 VTRFRKWIESNGWWNGDIESELRSSVRKQVILV 329 (343)
Q Consensus 297 i~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a 329 (343)
+..|++.|.++|..+.++++.-.++.++.+...
T Consensus 25 ~me~rD~LEeqG~~~~~eI~~kV~~~RkkL~~~ 57 (61)
T 2e62_A 25 LIEYRETLEEQGMKNPEEIERKVEINRKRLEVD 57 (61)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHh
Confidence 346899999999999888888888887777643
No 144
>1ugp_A NitrIle hydratase alpha subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: d.149.1.1 PDB: 1ire_A 1ugr_A 1ugq_A 1ugs_A
Probab=23.17 E-value=67 Score=27.49 Aligned_cols=28 Identities=4% Similarity=0.111 Sum_probs=24.2
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHH
Q 019322 298 TRFRKWIESNGWWNGDIESELRSSVRKQ 325 (343)
Q Consensus 298 ~~~~~~L~~~g~~~~~~~~~i~~~~~~~ 325 (343)
..++..|+++|+++.++++.+.+.++..
T Consensus 21 ~AL~~lL~eKGli~~~~id~~~~~~e~~ 48 (203)
T 1ugp_A 21 KALESMLIEQGILTTSMIDRMAEIYENE 48 (203)
T ss_dssp HHHHHHHHHTTSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHhcc
Confidence 4789999999999999999988776655
No 145
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=22.78 E-value=82 Score=26.83 Aligned_cols=37 Identities=14% Similarity=0.241 Sum_probs=29.9
Q ss_pred CCeEEEEeCccccC-cchHHHHHHHHH-hCCCCEEEEEEc
Q 019322 165 DACAVTYFGDGGTS-EGDFHAALNFSA-VTEAPVIFICRN 202 (343)
Q Consensus 165 ~~~vv~~~GDG~~~-eG~~~Eal~~A~-~~~Lpvi~vv~n 202 (343)
-..+|+++|+=.-. .++.| ++..|. ..++|||.|..+
T Consensus 80 Sk~vIllIs~~T~~s~~v~w-EIe~Ai~~~~~PII~Vy~~ 118 (189)
T 3hyn_A 80 SKNIILFLSSITANSRALRE-EMNYGIGTKGLPVIVIYPD 118 (189)
T ss_dssp EEEEEEECCTTCCCCHHHHH-HHHHHTTTTCCCEEEEETT
T ss_pred cCcEEEEEecCccccchhHH-HHHHHHHhcCCcEEEEECC
Confidence 45789999998884 55566 599999 999999998766
No 146
>3hht_B NitrIle hydratase beta subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: b.34.4.4 PDB: 2dpp_B 1v29_B
Probab=22.75 E-value=86 Score=27.55 Aligned_cols=30 Identities=10% Similarity=0.072 Sum_probs=25.6
Q ss_pred HHHHHhCCCcHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 019322 287 IEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSV 322 (343)
Q Consensus 287 ~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~ 322 (343)
+++|- ..+.+.|+++|++|++|+++..+++
T Consensus 73 Ye~WL------~ale~lLvekGvit~~EL~~r~~~~ 102 (229)
T 3hht_B 73 YGHWI------ATVAYNLVDTGVLDEKELDERTEVF 102 (229)
T ss_dssp HHHHH------HHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HHHHH------HHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 67884 6789999999999999999887763
No 147
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=22.73 E-value=1.3e+02 Score=26.11 Aligned_cols=82 Identities=12% Similarity=-0.031 Sum_probs=52.8
Q ss_pred EEEEeCccccCcchHHHHHHHHHhCCCCEEEEEEcCCCcccccc--------ccccCCccHHHhHhhcCceEEEEeCCCH
Q 019322 168 AVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI--------SDQFRSDGAVVKGRAYGVRSIRVDGNDA 239 (343)
Q Consensus 168 vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~--------~~~~~~~~~~~~a~a~G~~~~~VdG~d~ 239 (343)
-+.++|=+... .+.-.++...++++.+...++...+..-. .-.....-..+.|+.+|++++.+.+ .
T Consensus 108 kIavVg~~~~~----~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~vVVG~~~~~~~A~~~Gl~~vlI~s--~ 181 (225)
T 2pju_A 108 SIGVVTYQETI----PALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYS--A 181 (225)
T ss_dssp CEEEEEESSCC----HHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEESHHHHHHHHHTTSEEEESSC--H
T ss_pred cEEEEeCchhh----hHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHcCCcEEEECC--H
Confidence 35555555553 33455778889988777766642221100 0011223356889999999999994 6
Q ss_pred HHHHHHHHHHHHHhhc
Q 019322 240 LAIYSAVHAAREMAIG 255 (343)
Q Consensus 240 ~~v~~a~~~a~~~~r~ 255 (343)
+++..|+.+|++-++.
T Consensus 182 eSI~~Ai~eA~~l~~~ 197 (225)
T 2pju_A 182 ATVRQAFSDALDMTRM 197 (225)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999876654
No 148
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=22.54 E-value=3.3e+02 Score=24.62 Aligned_cols=42 Identities=17% Similarity=0.114 Sum_probs=23.8
Q ss_pred HHHHH-HHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCC
Q 019322 184 AALNF-SAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN 237 (343)
Q Consensus 184 Eal~~-A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~ 237 (343)
-++.. |+..++|.++++-.+- + ..-.+..+.||..++.+++.
T Consensus 85 ~alA~aa~~~G~~~~iv~p~~~-----~-------~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 85 VSLAHLGAIRGYKVIITMPESM-----S-------LERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHHHHHHHHTCEEEEEEETTS-----C-------HHHHHHHHHTTCEEEEECGG
T ss_pred HHHHHHHHHhCCCEEEEECCCC-----C-------HHHHHHHHHCCCEEEEECCC
Confidence 33443 4567899888875541 0 11223456677777777653
No 149
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=22.44 E-value=1.8e+02 Score=25.77 Aligned_cols=70 Identities=6% Similarity=-0.080 Sum_probs=43.4
Q ss_pred EEEEEEcCCCccccc--ccc--ccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEE
Q 019322 196 VIFICRNNGWAISTP--ISD--QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (343)
Q Consensus 196 vi~vv~nN~~~~~~~--~~~--~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t 266 (343)
+.+||+|..|..... ... ......+.+.++.+|+.+...+--+..++.+++++..+.- .....++|-+..
T Consensus 23 ~aLIInn~~f~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~-h~~~D~~vv~il 96 (277)
T 1nw9_B 23 HCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQD-HGALDCCVVVIL 96 (277)
T ss_dssp EEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHHHSC-CTTCSEEEEEEE
T ss_pred EEEEEeCcccCCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhh-cccCCeEEEEEe
Confidence 566666666754321 111 1122457888999999999888788899999998765421 123455555443
No 150
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=22.27 E-value=80 Score=26.51 Aligned_cols=32 Identities=6% Similarity=-0.146 Sum_probs=18.8
Q ss_pred EEEEeCccccCcchHHHHHHHHHhCCCCEEEE
Q 019322 168 AVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI 199 (343)
Q Consensus 168 vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~v 199 (343)
++++.||+....+...++...++..+..+.+|
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~I 141 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDII 141 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEE
Confidence 45555666444556666666666666665544
No 151
>1abz_A Alpha-T-alpha, ATA; de novo design, helix-turn-helix, peptide; HET: SIN; NMR {} SCOP: k.15.1.1
Probab=22.17 E-value=60 Score=19.61 Aligned_cols=26 Identities=8% Similarity=0.134 Sum_probs=21.8
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHH
Q 019322 302 KWIESNGWWNGDIESELRSSVRKQVI 327 (343)
Q Consensus 302 ~~L~~~g~~~~~~~~~i~~~~~~~v~ 327 (343)
..|..+|-=+.+|+.+++++.+++++
T Consensus 13 qaleargtdsnaelrameaklkaeiq 38 (40)
T 1abz_A 13 QALEARGTDSNAELRAMEAKLKAEIQ 38 (40)
T ss_dssp HHHHHTCSSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCchHHHHHHHHHHHHHHh
Confidence 45678898888999999999988875
No 152
>2zzd_C Thiocyanate hydrolase subunit gamma; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dxc_C* 2dxb_C 2dd5_C* 2dd4_C*
Probab=22.02 E-value=95 Score=27.28 Aligned_cols=27 Identities=11% Similarity=0.180 Sum_probs=22.7
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 019322 298 TRFRKWIESNGWWNGDIESELRSSVRK 324 (343)
Q Consensus 298 ~~~~~~L~~~g~~~~~~~~~i~~~~~~ 324 (343)
..++..|+++|+++.++++++.+.++.
T Consensus 32 ~AL~~lL~eKGli~~~~~~~~~~~~e~ 58 (243)
T 2zzd_C 32 MAVRELAIEKGLFSAEDHRVWKDYVHT 58 (243)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHhc
Confidence 468899999999999999988776543
No 153
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=22.01 E-value=3.9e+02 Score=24.24 Aligned_cols=16 Identities=19% Similarity=-0.035 Sum_probs=12.0
Q ss_pred HHHhCCCCEEEEEEcC
Q 019322 188 FSAVTEAPVIFICRNN 203 (343)
Q Consensus 188 ~A~~~~Lpvi~vv~nN 203 (343)
.|+..++++++++-.+
T Consensus 96 aa~~~G~~~~iv~p~~ 111 (343)
T 2pqm_A 96 AGAVFGYRVNIAMPST 111 (343)
T ss_dssp HHHHHTCCEEEEEETT
T ss_pred HHHHcCCCEEEEECCC
Confidence 4556889998888765
No 154
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=21.96 E-value=2.1e+02 Score=26.16 Aligned_cols=192 Identities=10% Similarity=0.047 Sum_probs=87.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCc-c--cccccchhhHHHHHHHhcCCCCcEEEccCcchHHHHHcCC
Q 019322 30 FVKVSEGVAIKMYNDMVTLQTMDTIF-YEAQRQGRI-S--FYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGF 105 (343)
Q Consensus 30 ~~~~s~~~~~~~~~~m~~~R~~e~~~-~~~~~~g~i-~--~~~~~~G~Ea~~v~~~~~l~~~D~v~~~yR~~~~~l~~G~ 105 (343)
..++|++++..++......+..-..- ....-+|+. . |+-++.=--..--....-|+ .+.++-.-. ...+.+|-
T Consensus 13 ~~dls~~ei~~ll~~A~~lk~~~~~~~~~~~L~gk~la~lF~e~STRTR~SFe~A~~~LG-g~~i~l~~~--~ss~~kgE 89 (315)
T 1pvv_A 13 LQDYTAEEIWTILETAKMFKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRVSFEVAMAHLG-GHALYLNAQ--DLQLRRGE 89 (315)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHHHHTCCCCTTTTCEEEEEESSCCSHHHHHHHHHHHHTT-SEEEEEEGG--GSTTTTTC
T ss_pred hhhCCHHHHHHHHHHHHHHHhhhhcCCccccCCCCEEEEEecCCCcchHHHHHHHHHHcC-CeEEEECCc--cccCCCCc
Confidence 45789999999988776555321100 000123553 2 44333221111111222344 455544311 23346777
Q ss_pred CHHHHHHHhhcCCCCC-CCCCC-cccccC--CCCCCcccccccccCchHHHHHHHHhcccc-c-CCCeEEEEeCccccCc
Q 019322 106 SMQEFANQCFGNKADY-GKGRQ-MPIHYG--SNKHNYFTVSSTIATQLPHAVGAAYALKMD-R-KDACAVTYFGDGGTSE 179 (343)
Q Consensus 106 ~~~~~~~~~~g~~~~~-~~G~~-~~~h~~--~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~-~-~~~~vv~~~GDG~~~e 179 (343)
++.+...-+-.-.+.. .+... ...+.. .....++.. +.=+.....++-=.+..+-. + -+...|+++||+ .
T Consensus 90 sl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa-~~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~---~ 165 (315)
T 1pvv_A 90 TIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPVING-LSDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDG---N 165 (315)
T ss_dssp CHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEE-ECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC---C
T ss_pred CHHHHHHHHHHhCcEEEEecCchHHHHHHHHhCCCCEEcC-CCCCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCC---c
Confidence 8777666543321110 00000 000000 001223322 12144455555544444322 2 256899999998 2
Q ss_pred chHHHHHHHHHhCCCCEEEEEEcCCCccccccccccCCccHH----HhHhhcCceEEEEeCCCHH
Q 019322 180 GDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAV----VKGRAYGVRSIRVDGNDAL 240 (343)
Q Consensus 180 G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~----~~a~a~G~~~~~VdG~d~~ 240 (343)
.+.+.-+..++.++..+.++. |..-. +.+++. +.++..|..+...+ |++
T Consensus 166 rva~Sl~~~~~~~g~~v~~~~---------P~~~~-~~~~~~~~~~~~a~~~g~~~~~~~--d~~ 218 (315)
T 1pvv_A 166 NVAHSLMIAGTKLGADVVVAT---------PEGYE-PDEKVIKWAEQNAAESGGSFELLH--DPV 218 (315)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC---------CTTCC-CCHHHHHHHHHHHHHHTCEEEEES--CHH
T ss_pred chHHHHHHHHHHCCCEEEEEC---------Ccccc-CCHHHHHHHHHHHHHcCCeEEEEe--CHH
Confidence 466666666777877666554 21111 122232 34457787666555 654
No 155
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=21.66 E-value=3.1e+02 Score=26.19 Aligned_cols=37 Identities=19% Similarity=0.126 Sum_probs=24.0
Q ss_pred HHHhCCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeC
Q 019322 188 FSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG 236 (343)
Q Consensus 188 ~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG 236 (343)
.|+..++|.++|+-.+- ...-.+..++||..++.+++
T Consensus 193 aAa~~Gl~~~IvmP~~~------------s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 193 IAASRGYRLILTMPASM------------SMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp HHHHHTCEEEEEEETTS------------CHHHHHHHHHTTCEEEEECG
T ss_pred HHHHhCCEEEEEEcCCC------------CHHHHHHHHHCCCEEEEECC
Confidence 35678999988886541 11123456778888888864
No 156
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=21.61 E-value=2e+02 Score=24.15 Aligned_cols=71 Identities=7% Similarity=0.054 Sum_probs=44.0
Q ss_pred CEEEEEEcCCCcccccc--cc--ccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEE
Q 019322 195 PVIFICRNNGWAISTPI--SD--QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (343)
Q Consensus 195 pvi~vv~nN~~~~~~~~--~~--~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~gP~lIe~~t 266 (343)
.+.+||+|-.|...+.. .. ......+.+.++.+|+.+...+--...++...++++.+. ......++|-+..
T Consensus 45 G~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LGF~V~~~~dlt~~em~~~l~~~~~~-dh~~~dc~vvvil 119 (179)
T 3p45_A 45 GIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTV-SHADADCFVCVFL 119 (179)
T ss_dssp CEEEEEECCSCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTS-CCTTBSCEEEEEE
T ss_pred CEEEEEeCcccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHhhh-hcCCCCEEEEEEe
Confidence 35666666566532111 11 112235788899999999999888889999999886431 1123456665554
No 157
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=21.41 E-value=1.7e+02 Score=22.79 Aligned_cols=54 Identities=7% Similarity=0.186 Sum_probs=29.9
Q ss_pred CCCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeC---CCHHHHHHHHHHH
Q 019322 192 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG---NDALAIYSAVHAA 249 (343)
Q Consensus 192 ~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG---~d~~~v~~a~~~a 249 (343)
.+.|+++|++- .-.. ...........+.++.++++++.+.. ..+.++...+.+.
T Consensus 122 ~~~piilv~nK--~Dl~--~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~l~~~ 178 (187)
T 2a9k_A 122 ENVPFLLVGNK--SDLE--DKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMRE 178 (187)
T ss_dssp TTCCEEEEEEC--GGGG--GGCCSCHHHHHHHHHHTTCEEEECCTTTCTTHHHHHHHHHHH
T ss_pred CCCCEEEEEEC--cccc--ccCccCHHHHHHHHHHcCCeEEEeCCCCCCCHHHHHHHHHHH
Confidence 36788877642 2111 11112223456677888999998764 4455555544443
No 158
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=21.29 E-value=59 Score=26.66 Aligned_cols=33 Identities=9% Similarity=0.107 Sum_probs=26.8
Q ss_pred CeEEEEeCccccCcchHHHHHHHHHhCCCCEEE
Q 019322 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIF 198 (343)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~ 198 (343)
++.+.++|-|....+...+...+|...++||+.
T Consensus 35 krPvil~G~g~~~~~a~~~l~~lae~~~iPV~~ 67 (170)
T 3cf4_G 35 KRPLLMVGTLALDPELLDRVVKISKAANIPIAA 67 (170)
T ss_dssp SSEEEEECSTTCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCEEEECCCccchhHHHHHHHHHHHhCCCEEE
Confidence 467888898888777777888899999999853
No 159
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=21.03 E-value=2.6e+02 Score=21.47 Aligned_cols=55 Identities=9% Similarity=0.207 Sum_probs=30.1
Q ss_pred CCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEe---CCCHHHHHHHHHHHHH
Q 019322 193 EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD---GNDALAIYSAVHAARE 251 (343)
Q Consensus 193 ~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~Vd---G~d~~~v~~a~~~a~~ 251 (343)
+.|+|+|++=-... .............+..+|++.+.+. |..+.++...+.+.+.
T Consensus 111 ~~piilv~NK~Dl~----~~~~v~~~~~~~~~~~~~~~~~~~Sa~~g~gi~~l~~~l~~~~~ 168 (175)
T 2nzj_A 111 HVPIILVGNKADLA----RCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFEGVVRQLR 168 (175)
T ss_dssp -CCEEEEEECTTCT----TTCCSCHHHHHHHHHHHTSEEEECBTTTTBSHHHHHHHHHHHHH
T ss_pred CCCEEEEEEChhhc----cccccCHHHHHHHHHHcCCeEEEEecCCCCCHHHHHHHHHHHHH
Confidence 57887776532211 1111122234456677899999875 5566666666655443
No 160
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=20.99 E-value=1e+02 Score=26.98 Aligned_cols=68 Identities=7% Similarity=0.209 Sum_probs=49.8
Q ss_pred cccCCCeEEEEeCcccc--CcchHHHHHHHHHhCCC-CEEEEEE--cCCCccccccccccCCccHHHhHhhcCceEEEEe
Q 019322 161 MDRKDACAVTYFGDGGT--SEGDFHAALNFSAVTEA-PVIFICR--NNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD 235 (343)
Q Consensus 161 ~~~~~~~vv~~~GDG~~--~eG~~~Eal~~A~~~~L-pvi~vv~--nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~Vd 235 (343)
+..|+.+.....-+|.. -.|..--++.+|..-+| |.-+||+ |.. ......+++.+.|+.+|++.+++.
T Consensus 142 f~rPGHVfPL~A~~gGVl~R~GHTEaaVdLarlAGl~Pa~VicEi~~dd-------G~mar~~~l~~fA~~h~l~~iti~ 214 (227)
T 1snn_A 142 FRSPGSVTLLRAAEGLVKNRQGHTEMTVALAELANLVPITTICEMMGDD-------GNAMSKNETKRYAEKHNLIYLSGE 214 (227)
T ss_dssp EEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCSEEEEEEEBCTT-------SSBCCHHHHHHHHHHHTCCEEEHH
T ss_pred cCCCCCceeEEeCCCCEeeCCCchHHHHHHHHHcCCCceEEEEEEeCCC-------CCcCCHHHHHHHHHHcCCcEEEHH
Confidence 34567777777777877 47888888999999999 8766665 321 112234678889999999999866
No 161
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=20.95 E-value=1.6e+02 Score=26.46 Aligned_cols=56 Identities=11% Similarity=0.032 Sum_probs=37.9
Q ss_pred EEEEEEcCCCcccccc--ccc--cCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHH
Q 019322 196 VIFICRNNGWAISTPI--SDQ--FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAARE 251 (343)
Q Consensus 196 vi~vv~nN~~~~~~~~--~~~--~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~ 251 (343)
+.+||+|-.|...+.. ... .....+.+.++.+|+.+....--+..++.+++++..+
T Consensus 46 ~aLIInN~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~f~~ 105 (277)
T 4ehd_A 46 LCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSK 105 (277)
T ss_dssp EEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHT
T ss_pred EEEEEEchhcCCcCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHh
Confidence 5666666667542211 111 1224578889999999999988888999999887653
No 162
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=20.93 E-value=1.5e+02 Score=26.17 Aligned_cols=55 Identities=5% Similarity=0.044 Sum_probs=35.7
Q ss_pred EEEEEEcCCCcccc-ccc--cccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHH
Q 019322 196 VIFICRNNGWAIST-PIS--DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 250 (343)
Q Consensus 196 vi~vv~nN~~~~~~-~~~--~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~ 250 (343)
+.+||+|..|.... +.. .......+.+.++.+|+.+....--+..++.+++++..
T Consensus 22 ~aLIInn~~f~~~~l~~R~G~~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~ 79 (259)
T 3sir_A 22 MALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTIEYSA 79 (259)
T ss_dssp EEEEEEECCC-----------CCHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHHHH
T ss_pred EEEEEeccccCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 56667676775321 111 11123457888999999999888788899999988765
No 163
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=20.55 E-value=2.4e+02 Score=21.15 Aligned_cols=55 Identities=16% Similarity=0.257 Sum_probs=31.0
Q ss_pred CCCEEEEEEcCCCccccccccccCCccHHHhHhhcCceEEEEeCCCHHHHHHHHHHHHHH
Q 019322 193 EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREM 252 (343)
Q Consensus 193 ~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~ 252 (343)
+.|+++|++--... . .........+.++.+|++++.+...+-..+.+.+....+.
T Consensus 108 ~~p~iiv~nK~Dl~--~---~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~l~~~ 162 (166)
T 2ce2_X 108 DVPMVLVGNKSDLA--A---RTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVRE 162 (166)
T ss_dssp CCCEEEEEECTTCS--C---CCSCHHHHHHHHHHHTCCEEEECTTTCTTHHHHHHHHHHH
T ss_pred CCcEEEEEEchhhh--h---cccCHHHHHHHHHHcCCeEEEecCCCCCCHHHHHHHHHHH
Confidence 67888776532211 1 1112234556777789999998765554555555544443
No 164
>1ugp_B NitrIle hydratase beta subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: b.34.4.4 PDB: 1ire_B 1ugq_B 1ugr_B 1ugs_B
Probab=20.38 E-value=1.1e+02 Score=26.93 Aligned_cols=31 Identities=10% Similarity=-0.014 Sum_probs=25.5
Q ss_pred HHHHHhCCCcHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 019322 287 IEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVR 323 (343)
Q Consensus 287 ~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~ 323 (343)
+++|- ..+.+.|+++|++|.+|+++..++..
T Consensus 69 Ye~Wl------~ale~lLvekGvit~~EL~ar~~~~~ 99 (226)
T 1ugp_B 69 YWHWI------RTYIHHGVRTGKIDLEELERRTQYYR 99 (226)
T ss_dssp HHHHH------HHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred HHHHH------HHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 57784 67899999999999999988766653
No 165
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=20.05 E-value=1.4e+02 Score=27.36 Aligned_cols=32 Identities=6% Similarity=-0.002 Sum_probs=22.6
Q ss_pred cHHHhHhhcCceEEEEeCCCHHHHHHHHHHHH
Q 019322 219 GAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 250 (343)
Q Consensus 219 ~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~ 250 (343)
.+.+.++.+|+.+....--+..++.+++++..
T Consensus 88 ~L~~~f~~LGF~V~~~~dlt~~em~~~l~~f~ 119 (310)
T 2nn3_C 88 NLSKVLKTLGFKVTVFPNLKSEEINKFIQQTA 119 (310)
T ss_dssp HHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEecCCCHHHHHHHHHHHH
Confidence 46677777788877777667777777776554
Done!