Your job contains 1 sequence.
>019326
MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGT
DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF
VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD
GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN
SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPL
PLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKASMEDS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019326
(343 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2014988 - symbol:AT1G65030 "AT1G65030" species... 1110 1.8e-112 1
UNIPROTKB|Q9NWT1 - symbol:PAK1IP1 "p21-activated protein ... 415 7.8e-39 1
ZFIN|ZDB-GENE-030131-8414 - symbol:pak1ip1 "PAK1 interact... 393 1.7e-36 1
UNIPROTKB|E2RDQ1 - symbol:PAK1IP1 "Uncharacterized protei... 392 2.1e-36 1
RGD|1565353 - symbol:Pak1ip1 "PAK1 interacting protein 1"... 390 3.5e-36 1
MGI|MGI:1915333 - symbol:Pak1ip1 "PAK1 interacting protei... 373 2.2e-34 1
UNIPROTKB|F1MRA9 - symbol:PAK1IP1 "p21-activated protein ... 369 5.8e-34 1
UNIPROTKB|Q5EA99 - symbol:PAK1IP1 "p21-activated protein ... 366 1.2e-33 1
UNIPROTKB|F1NWB8 - symbol:PAK1IP1 "p21-activated protein ... 362 3.2e-33 1
UNIPROTKB|Q5ZKU8 - symbol:PAK1IP1 "p21-activated protein ... 359 6.7e-33 1
CGD|CAL0000994 - symbol:orf19.1791 species:5476 "Candida ... 119 2.6e-13 3
SGD|S000001504 - symbol:MAK11 "Protein involved in an ear... 156 7.0e-11 2
POMBASE|SPCC16C4.08c - symbol:skb15 "p21 activated protei... 167 5.0e-10 1
UNIPROTKB|G4N7A9 - symbol:MGG_06429 "Uncharacterized prot... 88 2.5e-07 4
TAIR|locus:2015423 - symbol:AT1G47610 "AT1G47610" species... 135 2.6e-06 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 123 5.2e-05 1
ASPGD|ASPL0000070959 - symbol:AN4471 species:162425 "Emer... 94 5.3e-05 3
ZFIN|ZDB-GENE-050522-296 - symbol:wdr16 "WD repeat domain... 126 6.8e-05 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 112 0.00012 2
DICTYBASE|DDB_G0291231 - symbol:mhkA "myosin heavy chain ... 126 0.00015 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 126 0.00018 1
UNIPROTKB|E1BKF9 - symbol:WDR16 "Uncharacterized protein"... 122 0.00019 1
TAIR|locus:2032452 - symbol:AT1G24130 "AT1G24130" species... 119 0.00022 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 96 0.00023 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 118 0.00029 1
MGI|MGI:106247 - symbol:Prpf19 "PRP19/PSO4 pre-mRNA proce... 119 0.00030 1
RGD|708496 - symbol:Prpf19 "PRP19/PSO4 pre-mRNA processin... 119 0.00030 1
UNIPROTKB|Q9JMJ4 - symbol:Prpf19 "Pre-mRNA-processing fac... 119 0.00030 1
RGD|1308151 - symbol:Wdr16 "WD repeat domain 16" species:... 120 0.00031 1
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 108 0.00033 2
WB|WBGene00020423 - symbol:prp-19 species:6239 "Caenorhab... 118 0.00038 1
UNIPROTKB|Q5ZMA2 - symbol:PRPF19 "Pre-mRNA-processing fac... 118 0.00039 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 115 0.00044 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 102 0.00056 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 116 0.00063 1
UNIPROTKB|Q9UMS4 - symbol:PRPF19 "Pre-mRNA-processing fac... 116 0.00065 1
UNIPROTKB|Q489S0 - symbol:CPS_0436 "Putative uncharacteri... 113 0.00069 1
TIGR_CMR|CPS_0436 - symbol:CPS_0436 "conserved hypothetic... 113 0.00069 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 103 0.00075 2
TAIR|locus:2062994 - symbol:AT2G46290 "AT2G46290" species... 113 0.00081 1
UNIPROTKB|Q08E38 - symbol:PRPF19 "Pre-mRNA-processing fac... 115 0.00085 1
UNIPROTKB|B2CCY7 - symbol:PRPF19 "Nuclear matrix protein ... 115 0.00085 1
UNIPROTKB|E2R8L3 - symbol:PRPF19 "Uncharacterized protein... 115 0.00087 1
>TAIR|locus:2014988 [details] [associations]
symbol:AT1G65030 "AT1G65030" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 KO:K14830 OMA:NDGFIKM
eggNOG:NOG328772 UniGene:At.43680 UniGene:At.74019 EMBL:BT015862
IPI:IPI00539317 RefSeq:NP_176683.1 ProteinModelPortal:Q5XEV4
SMR:Q5XEV4 STRING:Q5XEV4 PaxDb:Q5XEV4 PRIDE:Q5XEV4
EnsemblPlants:AT1G65030.1 GeneID:842811 KEGG:ath:AT1G65030
TAIR:At1g65030 HOGENOM:HOG000244178 InParanoid:Q5XEV4
PhylomeDB:Q5XEV4 ProtClustDB:CLSN2679370 Genevestigator:Q5XEV4
Uniprot:Q5XEV4
Length = 345
Score = 1110 (395.8 bits), Expect = 1.8e-112, P = 1.8e-112
Identities = 215/346 (62%), Positives = 266/346 (76%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPIXXXXXXXXXXXXXXX 60
MS+IAGSYE+FIWG+KLKP+ H ++ +TLTL+ LFSYP+H+SPI
Sbjct: 1 MSIIAGSYERFIWGFKLKPTKH-DAESQTLTLSPLFSYPSHISPITTVACSGPAAASGGS 59
Query: 61 XXXIHLYDLSTSSSLGAI-HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP 119
IHLYDL ++SSLG++ H+ ++S+T+L+FYTP +LS PRNL S +ADG V+IFD DP
Sbjct: 60 DDTIHLYDLPSASSLGSLLDHNHAASITALSFYTPSSLSFPRNLISAAADGSVAIFDTDP 119
Query: 120 FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKF 179
FVLL S + HKK VNDLA+H SGKLAL V RD+ AM+NLVRG+RSF ++G EASL+KF
Sbjct: 120 FVLLKSFRPHKKAVNDLAIHPSGKLALAVYRDEFFAMLNLVRGKRSFCCRLGHEASLVKF 179
Query: 180 DGSGEKFFMVTEEKVGIHQAEDAKLLCELDG--KKRILCAAPGENGVLFTGGEDRSITAW 237
D SGE+F+MV KVG+HQ+EDAKLL EL+ +KRILCA PGE+G LFTGGEDR+ITAW
Sbjct: 180 DPSGERFYMVVSNKVGVHQSEDAKLLLELENPSRKRILCATPGESGTLFTGGEDRAITAW 239
Query: 238 DTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKE 297
DTNSGK+AY IEDAH AR+KGIVVLT+ND + E+PYL+ SASSDG+I VWDVRMA KE
Sbjct: 240 DTNSGKLAYSIEDAHPARIKGIVVLTRNDSDGSLEDPYLIGSASSDGIIRVWDVRMAAKE 299
Query: 298 KPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKASMEDS 343
PLAE T SRLTCLAGS+ KS +RPQIG P+ ++ EDS
Sbjct: 300 NTKPLAETNTKSRLTCLAGSALKSMRRPQIGKQEPQKVDEEH-EDS 344
>UNIPROTKB|Q9NWT1 [details] [associations]
symbol:PAK1IP1 "p21-activated protein kinase-interacting
protein 1" species:9606 "Homo sapiens" [GO:0009968 "negative
regulation of signal transduction" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009968 EMBL:AL358777 KO:K14830 CTD:55003
HOGENOM:HOG000007618 HOVERGEN:HBG082144 OrthoDB:EOG45MN5T
OMA:NDGFIKM EMBL:AF283303 EMBL:AK000631 EMBL:BC010907
IPI:IPI00549540 RefSeq:NP_060376.2 UniGene:Hs.310231
ProteinModelPortal:Q9NWT1 SMR:Q9NWT1 STRING:Q9NWT1
PhosphoSite:Q9NWT1 DMDM:71153057 SWISS-2DPAGE:Q9NWT1 PaxDb:Q9NWT1
PeptideAtlas:Q9NWT1 PRIDE:Q9NWT1 DNASU:55003
Ensembl:ENST00000379568 GeneID:55003 KEGG:hsa:55003 UCSC:uc003mzg.3
GeneCards:GC06P010694 H-InvDB:HIX0005573 HGNC:HGNC:20882
HPA:HPA030112 MIM:607811 neXtProt:NX_Q9NWT1 PharmGKB:PA134928299
InParanoid:Q9NWT1 PhylomeDB:Q9NWT1 ChiTaRS:PAK1IP1 GenomeRNAi:55003
NextBio:58332 Bgee:Q9NWT1 CleanEx:HS_PAK1IP1 Genevestigator:Q9NWT1
GermOnline:ENSG00000111845 Uniprot:Q9NWT1
Length = 392
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 104/314 (33%), Positives = 159/314 (50%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPIXXXXXXXXXXXXXXX 60
M L+AG YE+ ++G+ + P D + TL F++ AH + +
Sbjct: 1 MELVAGCYEQVLFGFAVHPEPEACGDHEQWTLVADFTHHAHTASLSAVAVNSRFVVTGSK 60
Query: 61 XXXIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
IH+YD+ GA+ HH S ++T L FY N R+L S + DG + I+DA +
Sbjct: 61 DETIHIYDMKKKIEHGALVHH-SGTITCLKFYG--N----RHLISGAEDGLICIWDAKKW 113
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
L S+K HK V L++H SGKLAL+VG D L NLV GR +F I + A ++++
Sbjct: 114 ECLKSIKAHKGQVTFLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNIKQNAHIVEWS 173
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
GE++ ++ + K+ I+Q + A + + +KRI VL G++ I +D +
Sbjct: 174 PRGEQYVVIIQNKIDIYQLDTASISGTITNEKRISSVKFLSESVLAVAGDEEVIRFFDCD 233
Query: 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPL 300
S V C AH RVK + E+ +++ SASSDG I +W ++ K P
Sbjct: 234 S-LVCLCEFKAHENRVKDMFSF------EIPEH-HVIVSASSDGFIKMWKLKQDKKVPPS 285
Query: 301 PLAEAKTNSRLTCL 314
L E TN+RLTCL
Sbjct: 286 LLCEINTNARLTCL 299
>ZFIN|ZDB-GENE-030131-8414 [details] [associations]
symbol:pak1ip1 "PAK1 interacting protein 1"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0009968
"negative regulation of signal transduction" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-8414
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0009968
GeneTree:ENSGT00390000001263 KO:K14830 CTD:55003
HOGENOM:HOG000007618 HOVERGEN:HBG082144 OrthoDB:EOG45MN5T
EMBL:AY391445 EMBL:BC049528 EMBL:BC066416 IPI:IPI00493745
RefSeq:NP_957239.2 UniGene:Dr.35443 ProteinModelPortal:Q6TNS2
STRING:Q6TNS2 Ensembl:ENSDART00000065338 GeneID:336470
KEGG:dre:336470 InParanoid:Q6TNS2 OMA:NDGFIKM NextBio:20811756
Bgee:Q6TNS2 Uniprot:Q6TNS2
Length = 368
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 96/314 (30%), Positives = 158/314 (50%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPIXXXXXXXXXXXXXXX 60
+ L+AG YE+ ++GY++ P+ D++ T+ F++ AH + +
Sbjct: 12 IELVAGCYEQIVFGYRVCPA-----DEEW-TIEPTFTHHAHTASLNAVSSSNQFIATGSK 65
Query: 61 XXXIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
I LYD+ + GA+ HH+ + ++ L FY +L S DG + ++ +
Sbjct: 66 DETIQLYDMCKKTEHGALLHHDGT-ISCLEFYGTSHL------LSGGQDGLICVWSTKKW 118
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
L +++ HK V L+VH SGKLAL+VG D L NL+ GR +F I + A ++ +
Sbjct: 119 ECLKTIRAHKGQVTSLSVHPSGKLALSVGTDKTLRTWNLIEGRSAFIKNIKQNAEIVLWS 178
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
G+K+ +V +KV I+ + A ++ + KRI C +N +L GG+D S+ +D
Sbjct: 179 PDGDKYAVVVNDKVDIYTLDSATIIGTIAFTKRISCLKFLKNSLLAVGGDDESVRIYDVT 238
Query: 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPL 300
S K C AH RVK I K+D ++ +AS+DG I +W + + E P
Sbjct: 239 SQKCV-CEFKAHENRVKAIESFMKDDF-------CVLVTASNDGFIKLWKLNLESIESPT 290
Query: 301 PLAEAKTNSRLTCL 314
L + T +RLTCL
Sbjct: 291 LLGQLNTTARLTCL 304
>UNIPROTKB|E2RDQ1 [details] [associations]
symbol:PAK1IP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00390000001263 OMA:NDGFIKM
EMBL:AAEX03017528 Ensembl:ENSCAFT00000015390 Uniprot:E2RDQ1
Length = 394
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 99/318 (31%), Positives = 160/318 (50%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQL--FSYPAHLSPIXXXXXXXXXXXXX 58
M L+AG YE+ ++G+ ++ + + T + F++ AH + +
Sbjct: 1 MELVAGCYEQVLFGFAIRREPDAGGEHREQKWTAVADFTHHAHTASLSAVAVNSRFVVTG 60
Query: 59 XXXXXIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD 118
IH+YD+ GA+ HH + ++T L FY N R+L S + DG + ++DA
Sbjct: 61 SKDETIHIYDMKKKIDHGALVHH-NGTITCLKFYG--N----RHLISGAEDGLICVWDAK 113
Query: 119 PFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIK 178
+ L S+K HK V L++H SGKLAL+VG D L NLV GR +F I + A +++
Sbjct: 114 KWECLKSIKAHKGHVTFLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNIKQNAHIVE 173
Query: 179 FDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWD 238
+ GE++ +V K+ ++Q + A + + +KRI VL G++ + +D
Sbjct: 174 WSPRGERYIVVILNKINVYQLDTASVSGTITNEKRISSVTFLSESVLAVAGDEEVVRFFD 233
Query: 239 TNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENP--YLVASASSDGVICVWDVRMAIK 296
+S C AH RVK I + E+P +++ +ASSDG I +W ++ K
Sbjct: 234 CDS-LTCVCEFKAHENRVKDIF---------SFEDPEHHIIVTASSDGFIKMWKLKQDKK 283
Query: 297 EKPLPLAEAKTNSRLTCL 314
P L E KTN+RLTCL
Sbjct: 284 VPPSLLCEVKTNARLTCL 301
>RGD|1565353 [details] [associations]
symbol:Pak1ip1 "PAK1 interacting protein 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565353 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH473977 GeneTree:ENSGT00390000001263 KO:K14830 CTD:55003
HOGENOM:HOG000007618 HOVERGEN:HBG082144 OrthoDB:EOG45MN5T
OMA:NDGFIKM EMBL:BC107922 IPI:IPI00392457 RefSeq:NP_001032433.1
UniGene:Rn.115052 STRING:Q32PZ0 Ensembl:ENSRNOT00000036195
GeneID:361232 KEGG:rno:361232 UCSC:RGD:1565353 InParanoid:Q32PZ0
NextBio:675645 Genevestigator:Q32PZ0 Uniprot:Q32PZ0
Length = 382
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 100/314 (31%), Positives = 156/314 (49%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPIXXXXXXXXXXXXXXX 60
M L+AGSYE+ ++G+ + S ++T T F++ AH + +
Sbjct: 1 MELVAGSYEQVLFGFTVHRGPAKSGHRETWTPVADFTHHAHTASLSAVAANNRYVVTGSK 60
Query: 61 XXXIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
IH+YD+ GA+ HH S +VT L FY R+L S + DG + ++DA +
Sbjct: 61 DETIHIYDMKKKVEHGALVHH-SGTVTCLKFYGS------RHLISGAEDGLICVWDAKKW 113
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
L S+K H+ V L++H SGKLAL+VG D L NLV GR +F I + A ++++
Sbjct: 114 ECLKSIKAHRGHVTFLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNIKQNAHIVEWS 173
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
+GEK+ +V KV ++ + A + L KRI + VL G++ + +D +
Sbjct: 174 PNGEKYVVVVMNKVDVYHLDTASVSGTLTNGKRISAITFLSDSVLAVAGDEEVVRFFDCD 233
Query: 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPL 300
+ V C AH RVK +V D +++ +AS+DG I +W + K P
Sbjct: 234 T-LVCLCEFKAHENRVKDMVSFEIPDH-------HVLVTASNDGFIKMWTLTQDKKAPPS 285
Query: 301 PLAEAKTNSRLTCL 314
L E T +RLTCL
Sbjct: 286 LLCETNTGARLTCL 299
>MGI|MGI:1915333 [details] [associations]
symbol:Pak1ip1 "PAK1 interacting protein 1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009968 "negative regulation
of signal transduction" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915333 GO:GO:0005886
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009968 GeneTree:ENSGT00390000001263 KO:K14830 CTD:55003
HOGENOM:HOG000007618 HOVERGEN:HBG082144 OrthoDB:EOG45MN5T
OMA:NDGFIKM ChiTaRS:PAK1IP1 EMBL:AY030406 EMBL:AF386076
EMBL:AK002852 EMBL:AK077941 EMBL:AK150747 EMBL:AK150919
EMBL:BC051498 IPI:IPI00120790 RefSeq:NP_080826.2 UniGene:Mm.24789
ProteinModelPortal:Q9DCE5 SMR:Q9DCE5 STRING:Q9DCE5
PhosphoSite:Q9DCE5 PaxDb:Q9DCE5 PRIDE:Q9DCE5
Ensembl:ENSMUST00000046951 GeneID:68083 KEGG:mmu:68083
UCSC:uc007qer.2 InParanoid:Q9DCE5 NextBio:326384 Bgee:Q9DCE5
CleanEx:MM_PAK1IP1 Genevestigator:Q9DCE5
GermOnline:ENSMUSG00000038683 Uniprot:Q9DCE5
Length = 382
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 97/314 (30%), Positives = 157/314 (50%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPIXXXXXXXXXXXXXXX 60
M L+AGSYE+ ++G+ ++ S Q+T T F++ +H + +
Sbjct: 1 MELVAGSYEQVLFGFTVQRGPAKSGHQETWTPVADFTHHSHTASLSVLASNSRYVVSGSK 60
Query: 61 XXXIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
IH+YD+ GA+ HH + +VT L F+ Q+L S + DG + I+D +
Sbjct: 61 DETIHIYDMKRKVEHGALVHH-AGTVTCLKFHGNQHL------ISGAEDGHICIWDVKRW 113
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
L + K H+ V L++H SGKLAL+VG D L NL+ GR +F I + A ++++
Sbjct: 114 KCLKTFKAHRGHVTFLSIHPSGKLALSVGTDKTLRTWNLIEGRSAFIKNIKENAHIVEWS 173
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
SG K+ +V + KV +++ A + + KRI + VL G++ + +D +
Sbjct: 174 PSGGKYIVVVQNKVDVYRLGTASVSGTITNGKRISSVTFLSDSVLAVAGDEEVVRIFDCD 233
Query: 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPL 300
S + C AH RVK +V D +++ +AS+DG I +W + K P
Sbjct: 234 SLE-CLCEFRAHENRVKDMVSFEVPDH-------HVLVTASNDGFIKMWTLPQDKKVPPS 285
Query: 301 PLAEAKTNSRLTCL 314
L EAKT +RLTCL
Sbjct: 286 LLCEAKTGARLTCL 299
>UNIPROTKB|F1MRA9 [details] [associations]
symbol:PAK1IP1 "p21-activated protein kinase-interacting
protein 1" species:9913 "Bos taurus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00390000001263 IPI:IPI00710889
UniGene:Bt.48999 OMA:NDGFIKM EMBL:DAAA02055768
Ensembl:ENSBTAT00000024854 Uniprot:F1MRA9
Length = 392
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 100/345 (28%), Positives = 168/345 (48%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPIXXXXXXXXXXXXXXX 60
M ++AG YE+ ++G+ + P ++ F++ AH + +
Sbjct: 1 MEVVAGCYEQVLFGFAVHPEPVGDGHRERWAPVADFTHHAHTASLSAVAVNSRFVVTGSK 60
Query: 61 XXXIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
IH+YD+ GA+ HH + ++T L F+ N R+L S + DG + ++DA +
Sbjct: 61 DETIHIYDMKKKVDHGALMHH-NGTITCLKFHG--N----RHLISGAEDGLICVWDARRW 113
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
L S++ HK V L++H SGKLAL+VG D L NLV GR +F I + A ++++
Sbjct: 114 ECLKSIRAHKGHVTFLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNIKQSAHIVEWS 173
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
GEK+ +V ++ ++Q + A + + ++R+ VL G++ + +D +
Sbjct: 174 PKGEKYVVVILNRIDVYQLDTASVSGTITNERRVSSVTFLSESVLTVAGDEEVVRFFDCD 233
Query: 241 SGKVAYCIED--AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEK 298
S C+ + AH RVK + T E+ LV +ASSDG I +W ++ K
Sbjct: 234 S---LTCLSEFKAHENRVKDMFSF------ETPEHHVLV-TASSDGFIKMWKLKQDKKVS 283
Query: 299 PLPLAEAKTNSRLTCLA-----GSSTKSFKRPQIGDSAPKGEEKA 338
P L E TN+RLTCL + TK P + AP +E++
Sbjct: 284 PSLLCEINTNARLTCLGVWLDRRTDTKE-SPPAAAEPAPVSKEQS 327
>UNIPROTKB|Q5EA99 [details] [associations]
symbol:PAK1IP1 "p21-activated protein kinase-interacting
protein 1" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0009968 "negative regulation of signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0009968 KO:K14830
EMBL:BT020668 EMBL:BT020670 IPI:IPI00710889 RefSeq:NP_001014852.1
UniGene:Bt.48999 ProteinModelPortal:Q5EA99 STRING:Q5EA99
GeneID:505125 KEGG:bta:505125 CTD:55003 HOGENOM:HOG000007618
HOVERGEN:HBG082144 InParanoid:Q5EA99 OrthoDB:EOG45MN5T
NextBio:20866992 Uniprot:Q5EA99
Length = 392
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 99/345 (28%), Positives = 168/345 (48%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPIXXXXXXXXXXXXXXX 60
M ++AG YE+ ++G+ + P ++ F++ AH + +
Sbjct: 1 MEVVAGCYEQVLFGFAVHPEPVGDGHRERWAPVADFTHHAHTASLSAVAVNSRFVVTGSK 60
Query: 61 XXXIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
IH+YD+ GA+ HH + ++T L F+ N R+L S + DG + ++DA +
Sbjct: 61 DETIHIYDMKKKVDHGALMHH-NGTITCLKFHG--N----RHLISGAEDGLICVWDARRW 113
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
L S++ HK V L++H SG+LAL+VG D L NLV GR +F I + A ++++
Sbjct: 114 ECLKSIRAHKGHVTFLSIHPSGRLALSVGTDKTLRTWNLVEGRSAFIKNIKQSAHIVEWS 173
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
GEK+ +V ++ ++Q + A + + ++R+ VL G++ + +D +
Sbjct: 174 PKGEKYVVVILNRIDVYQLDTASVSGTITNERRVSSVTFLSESVLTVAGDEEVVRFFDCD 233
Query: 241 SGKVAYCIED--AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEK 298
S C+ + AH RVK + T E+ LV +ASSDG I +W ++ K
Sbjct: 234 S---LTCLSEFKAHENRVKDMFSF------ETPEHHVLV-TASSDGFIKMWKLKQDKKVS 283
Query: 299 PLPLAEAKTNSRLTCLA-----GSSTKSFKRPQIGDSAPKGEEKA 338
P L E TN+RLTCL + TK P + AP +E++
Sbjct: 284 PSLLCEINTNARLTCLGVWLDRRTDTKE-SPPAAAEPAPVSKEQS 327
>UNIPROTKB|F1NWB8 [details] [associations]
symbol:PAK1IP1 "p21-activated protein kinase-interacting
protein 1-like" species:9031 "Gallus gallus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00390000001263 IPI:IPI00597011
OMA:NDGFIKM EMBL:AADN02027551 Ensembl:ENSGALT00000020771
Uniprot:F1NWB8
Length = 367
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 104/343 (30%), Positives = 161/343 (46%)
Query: 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPIXXXXXXXXXXXXXXXXX 62
L+AG YE+ ++G+ +P + T+T F++ AH + +
Sbjct: 1 LVAGCYEQILFGFAARPGEPW-------TVTPDFTHHAHTASLSAVAVNSKYVVTGSRDE 53
Query: 63 XIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL 122
I +YD+ GA+ H + ++T L FY +L S + DG + I++ +
Sbjct: 54 SIQIYDMRKKVEHGALLQH-NGTITCLEFYGTAHL------LSGAEDGLICIWNTKRWEC 106
Query: 123 LTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGS 182
L S+K HK V L++H SGKLAL+VG D L NLV GR +F + + A +IK+
Sbjct: 107 LKSIKAHKGHVTSLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNLKQNAHIIKWSPD 166
Query: 183 GEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSG 242
GEK+ V KV I++ + A + + +KRI + VL G+D I + +S
Sbjct: 167 GEKYVTVITNKVDIYKLDTASITGTITIEKRISSIRFITDSVLAIAGDDEIIRFYSCDSQ 226
Query: 243 KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM-AIKEKPLP 301
K C AH R+K I + E +++ +ASSDG I VW++ + I P
Sbjct: 227 K-CLCEFKAHENRIKDIYSFER-------EGQHVIVTASSDGYIKVWNLDLNKINNVPSL 278
Query: 302 LAEAKTNSRLTCLA-GSSTKSFKRPQIGDSAPKGEEKASMEDS 343
L E T +RLTCLA S + G +A E S + S
Sbjct: 279 LCEVSTKARLTCLAVWLDQASEMKENCGKAATSTEANESEKPS 321
>UNIPROTKB|Q5ZKU8 [details] [associations]
symbol:PAK1IP1 "p21-activated protein kinase-interacting
protein 1-like" species:9031 "Gallus gallus" [GO:0009968 "negative
regulation of signal transduction" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0009968 KO:K14830 CTD:55003
HOGENOM:HOG000007618 HOVERGEN:HBG082144 OrthoDB:EOG45MN5T
EMBL:AJ719986 IPI:IPI00597011 RefSeq:NP_001026170.1
UniGene:Gga.22356 ProteinModelPortal:Q5ZKU8 STRING:Q5ZKU8
GeneID:420850 KEGG:gga:420850 InParanoid:Q5ZKU8 NextBio:20823706
Uniprot:Q5ZKU8
Length = 369
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 104/345 (30%), Positives = 161/345 (46%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPIXXXXXXXXXXXXXXX 60
M L+AG YE+ ++G+ +P + T+T F++ AH + +
Sbjct: 1 MELVAGCYEQILFGFAARPGEPW-------TVTPDFTHHAHTASLSAVAVNSKYVVTGSR 53
Query: 61 XXXIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
I +YD+ GA+ H + ++T L FY +L S + DG + I++ +
Sbjct: 54 DESIQIYDMRKKVEHGALLQH-NGTITCLEFYGTAHL------LSGAEDGLICIWNTKRW 106
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
L S+K HK V L++H SGKLAL+VG D L NLV GR +F + + A +IK+
Sbjct: 107 ECLKSIKAHKGHVTSLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNLKQNAHIIKWS 166
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
GEK+ V KV I++ + A + + +KRI + VL G+D I + +
Sbjct: 167 PDGEKYVTVITNKVDIYKLDTASITGTITIEKRISSIRFITDSVLAIAGDDEIIRFYSCD 226
Query: 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM-AIKEKP 299
S K C A R+K I + E +++ +ASSDG I VW++ + I P
Sbjct: 227 SQK-CLCEFKARENRIKDIYSFER-------EGQHVIVTASSDGYIKVWNLDLNKINNVP 278
Query: 300 LPLAEAKTNSRLTCLA-GSSTKSFKRPQIGDSAPKGEEKASMEDS 343
L E T +RLTCLA S + G +A E S + S
Sbjct: 279 SLLCEVSTKARLTCLAVWLDQASEMKENCGKAATSTEANESEKPS 323
>CGD|CAL0000994 [details] [associations]
symbol:orf19.1791 species:5476 "Candida albicans" [GO:0016020
"membrane" evidence=IEA] [GO:0030685 "nucleolar preribosome"
evidence=IEA] [GO:0004860 "protein kinase inhibitor activity"
evidence=IEA] [GO:0070507 "regulation of microtubule cytoskeleton
organization" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071775 "regulation of cell cycle cytokinesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000198 EMBL:AACQ01000197 KO:K14830 eggNOG:NOG328772
RefSeq:XP_711439.1 RefSeq:XP_711456.1 ProteinModelPortal:Q59P13
STRING:Q59P13 GeneID:3646935 GeneID:3646959 KEGG:cal:CaO19.1791
KEGG:cal:CaO19.9357 Uniprot:Q59P13
Length = 491
Score = 119 (46.9 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 32/122 (26%), Positives = 63/122 (51%)
Query: 103 LFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG 162
L S S DG + I+ + +K H +NDLA+H SG++A++V +D + + NL+
Sbjct: 162 LLSGSEDGKIIIWRTKDWETFGILKGHTGKINDLAIHPSGRVAISVSQDQTIRLWNLMTA 221
Query: 163 RRSFYHKI-GKE-----ASLIKF--DGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRI 214
+++ KI GK+ +K+ D G F + ++ I++ AK++ ++ +
Sbjct: 222 KKAAILKIKGKDHLGQVGDFVKWSPDSKGSFFLIGMLNQILIYKTSTAKIIKKIKISPTL 281
Query: 215 LC 216
+C
Sbjct: 282 MC 283
Score = 95 (38.5 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 237 WDTNSGK-VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295
WD+ + +A H+ R+KGI + D T + PYLV S SSDG I +W+ + +
Sbjct: 343 WDSKPEQLIADFTLRGHTNRIKGISFI--QDNSETHDIPYLV-SVSSDGRIVIWN--LLL 397
Query: 296 KEKPLPLAEAKTNSRLTCLAGS 317
K++ +A T RL C+ S
Sbjct: 398 KDQ---IAVYDTGERLNCVVTS 416
Score = 71 (30.1 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 27/102 (26%), Positives = 38/102 (37%)
Query: 3 LIAGSYEKFIWGYK--LKPSNHYSSDQKTLTLTQLFSYPAHLSPIXXXXXXXXXXXXXXX 60
+ GSYE + L PSN K +F + AH I
Sbjct: 41 IFVGSYEHNLLCLSVILDPSNI-----KDPIFQPIFHFQAHSLSIKSMDLAKRYLVTGSN 95
Query: 61 XXXIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRN 102
I +YDL LG + H + ++TSL F T + P+N
Sbjct: 96 DEHIRIYDLQKRKELGTLLSH-NGTITSLKFSTEVSTENPQN 136
>SGD|S000001504 [details] [associations]
symbol:MAK11 "Protein involved in an early step of 60S
ribosomal subunit biogenesis" species:4932 "Saccharomyces
cerevisiae" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0000027 "ribosomal
large subunit assembly" evidence=IGI;IMP;IPI] [GO:0042273
"ribosomal large subunit biogenesis" evidence=IMP] [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000001504 GO:GO:0005730 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006944 GO:GO:0000463 GO:GO:0000027
GO:GO:0000466 KO:K05955 RefSeq:NP_012906.3 GeneID:853849
KEGG:sce:YKL019W EMBL:J03506 EMBL:Z28021 PIR:A29938
RefSeq:NP_012904.3 ProteinModelPortal:P20484 SMR:P20484
DIP:DIP-6516N IntAct:P20484 MINT:MINT-672909 STRING:P20484
PaxDb:P20484 PeptideAtlas:P20484 EnsemblFungi:YKL021C GeneID:853847
KEGG:sce:YKL021C CYGD:YKL021c GeneTree:ENSGT00390000001263
HOGENOM:HOG000001086 KO:K14830 OMA:KRKELGT OrthoDB:EOG45F0ZR
NextBio:975070 Genevestigator:P20484 GermOnline:YKL021C
Uniprot:P20484
Length = 468
Score = 156 (60.0 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 55/228 (24%), Positives = 103/228 (45%)
Query: 3 LIAGSYEKFIWGYKLKPSNHYSSDQ-KTLTLTQLFSYPAHLSPIXXXXXXXXXXXXXXXX 61
+I GSYE I L N +D KT +F + AH I
Sbjct: 66 IIVGSYEHNILCLSLDIPNQKENDAAKTPHFMPIFHFQAHSLSIKCLAVSRRYLVSGSND 125
Query: 62 XXIHLYDLSTSSSLGAIHHHESSSVTSLAFYTP----QNLSVPRN------LFSTSADGF 111
I +YDL LG + H+ S +T+L F P ++ +V + L S S D
Sbjct: 126 EHIRIYDLQKRKELGTLLSHQGS-ITALQFSHPASSSEDAAVSKGSKNSKWLLSASEDHK 184
Query: 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG 171
+ ++ + + ++K H VND+ +H + ++A++V D + + NL+ R + K+
Sbjct: 185 IMVWRVKDWETVGTLKGHTARVNDVDIHPTNRIAISVSDDHSIRLWNLMTLRNAAVLKLR 244
Query: 172 K---EASLIKFDGS-GEKFFMVTEEKVGIHQAEDAKLLCELDGKKRIL 215
K + +++ G+ G+ F + ++V I++ AK+ E+ +++ L
Sbjct: 245 KYNTNGTCVRWLGAKGDYFAVGLRDRVLIYETGSAKVFKEIVFQRKTL 292
Score = 63 (27.2 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 24/63 (38%), Positives = 32/63 (50%)
Query: 252 HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRL 311
H+ R+K T N+ G+ YLV + SDG I VWD M+ KE+ +A RL
Sbjct: 353 HTNRIKDFKFYT-NEFGT-----YLV-TIGSDGKIVVWD--MSTKEQ---VAVYDCGERL 400
Query: 312 TCL 314
CL
Sbjct: 401 NCL 403
>POMBASE|SPCC16C4.08c [details] [associations]
symbol:skb15 "p21 activated protein kinase inhibitor
Skb15" species:4896 "Schizosaccharomyces pombe" [GO:0004860
"protein kinase inhibitor activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030685 "nucleolar preribosome" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IMP] [GO:0043234 "protein complex"
evidence=NAS] [GO:0070507 "regulation of microtubule cytoskeleton
organization" evidence=IGI] [GO:0071775 "regulation of cell cycle
cytokinesis" evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC16C4.08c GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0071775 InterPro:IPR019775
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0004860 GO:GO:0042254
InterPro:IPR018391 SMART:SM00564 GO:GO:0070507 KO:K14830
OrthoDB:EOG45F0ZR OMA:NDGFIKM EMBL:AY030407 PIR:T41098
RefSeq:NP_587918.1 ProteinModelPortal:O74453 STRING:O74453
EnsemblFungi:SPCC16C4.08c.1 GeneID:2538757 KEGG:spo:SPCC16C4.08c
eggNOG:NOG328772 NextBio:20799941 GO:GO:0030685 Uniprot:O74453
Length = 341
Score = 167 (63.8 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 70/295 (23%), Positives = 127/295 (43%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPIXXXXXXXXXXXXXXX 60
+ + G+Y I+G +D + L+ + AH +
Sbjct: 2 LRFVVGTYTHLIYGV--------DADIERKKCKPLWLFEAHEGALTALAVDGIYLASTSS 53
Query: 61 XXXIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRN-LFSTSADGFVSIFDADP 119
I ++D + + + + S T +A +++ +N L + +G +S++
Sbjct: 54 DETIKIFDHTRNVQIADV-----SVPTDIANACIRDMCFTKNHLLACHDNGQISMWSKGS 108
Query: 120 FVLLTSVKVHK-KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIK 178
++L+ ++K KG+ +AVH S KLALTVG D L + +LVRG+ + I
Sbjct: 109 WLLVHTLKSSSHKGITGIAVHPSEKLALTVGGDGKLRLWDLVRGKGGKVLPLSTIPESIL 168
Query: 179 FDGSGEKFFMVTEEKVGIHQAE-DAKLLCELDGKKRI--LCAAPGENGVLFTGGEDRSIT 235
F E F++ + GI + D L K ++ LC + L G ++ ++
Sbjct: 169 F--LNESSFVIMSRR-GIDAFKLDLTSLFSFSSKSQLNALCLYQSK---LIVGRDNGTVL 222
Query: 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290
DT+ GK+ + AH RVK + + + YL+ +ASSDG +C+WD
Sbjct: 223 VLDTSDGKILHEFT-AHKKRVKSVYPV----------DDYLI-TASSDGSVCIWD 265
>UNIPROTKB|G4N7A9 [details] [associations]
symbol:MGG_06429 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CM001234 KO:K14830
RefSeq:XP_003717138.1 ProteinModelPortal:G4N7A9
EnsemblFungi:MGG_06429T0 GeneID:2684584 KEGG:mgr:MGG_06429
Uniprot:G4N7A9
Length = 496
Score = 88 (36.0 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 31/95 (32%), Positives = 48/95 (50%)
Query: 255 RVKGIVVLTKNDGGSTAENPY-LVASASSDGVICVWDV-RMAIKEKPLPLAEA----KTN 308
R+K VVL G A+ + ++ S SSDG I VW V R A+ P+ + +T
Sbjct: 399 RIKDFVVLP---GAEKAQQKHRVIVSGSSDGKIHVWKVERNALVSSKGPIGKILGSYETQ 455
Query: 309 SRLTCLAGSSTKSFKRPQ-IGDSAPKGEEKASMED 342
+R+TCL ++ RP+ + D + EE S E+
Sbjct: 456 NRITCL--TAFDMIPRPEGLDDEGGEDEEVESGEE 488
Score = 71 (30.1 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 132 GVNDLAVHHSGKLALTVGRDD-CLAMVNLVRGRRSFYHKIGKE 173
GVND AVH S K+ ++V + + + + NLV G+++ GK+
Sbjct: 217 GVNDFAVHPSLKVMISVSKGERSMRLWNLVTGKKAGVLNFGKD 259
Score = 65 (27.9 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 75 LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKV 128
LG + HH SS++T L+F T L S+S D ++I + LL+S+KV
Sbjct: 149 LGMLLHH-SSTITKLSFPTRSKL------LSSSEDSTIAITRTRDWSLLSSIKV 195
Score = 40 (19.1 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPI 45
+ ++ GSY++ + G+ + D+ + F + AH S +
Sbjct: 41 IQIVTGSYDRTLHGFTATIRSGKEGDK--IGFADTFLFDAHNSAV 83
>TAIR|locus:2015423 [details] [associations]
symbol:AT1G47610 "AT1G47610" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC007519 HOGENOM:HOG000236376 ProtClustDB:CLSN2681936
IPI:IPI00534811 PIR:A96517 RefSeq:NP_175192.1 UniGene:At.47680
ProteinModelPortal:Q9SX94 SMR:Q9SX94 STRING:Q9SX94
EnsemblPlants:AT1G47610.1 GeneID:841170 KEGG:ath:AT1G47610
TAIR:At1g47610 InParanoid:Q9SX94 OMA:CVWRRDG PhylomeDB:Q9SX94
Genevestigator:Q9SX94 Uniprot:Q9SX94
Length = 351
Score = 135 (52.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 63/229 (27%), Positives = 100/229 (43%)
Query: 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLA 137
I H ++ S SLA Q L L+S S D V ++ + S+K H VN +
Sbjct: 132 IKHSDAVSCLSLA--EDQGL-----LYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVT 184
Query: 138 VHHSGKLALTVGRDDCLAMVNL-VRGRRS----FYHKIGKEASLIKFDGSGEKFFMVTEE 192
S L T D + + +RG+R+ F + +E+++ S + + +
Sbjct: 185 TAES--LVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMAVYSGSSD 242
Query: 193 -KVGIHQAEDAKLL--CELDGKKR--ILC-AAPGENGVLFTGGEDRSITAWDTNSGKVAY 246
V + D KLL CE+ K R +LC AA G+ +LF+G D+ I W GKV
Sbjct: 243 GAVNFWEMGDKKLLKHCEVFKKHRLAVLCIAAAGK--LLFSGAADKKICVW-RREGKVHT 299
Query: 247 CIE--DAHSARVKGIVVLTKNDGGST--AENPYLVASASSDGVICVWDV 291
C+ H+ VK + V+ + G + ++ S S D + VW V
Sbjct: 300 CVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLYSGSLDKSVKVWRV 348
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 62/263 (23%), Positives = 111/263 (42%)
Query: 71 TSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHK 130
T +G++ H + VTS+A +P+N P + S+S D V ++ P + K H+
Sbjct: 10 TYLEVGSLVGH-NGFVTSIAV-SPEN---PDTIISSSRDKTVMVWQLTPTDATSPGKAHR 64
Query: 131 --KG----VNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGE 184
KG V D+ + H G+ AL+ D+ L + ++ +G + K G ++ S +
Sbjct: 65 SLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFK-GHTQDVMSVAFSSD 123
Query: 185 KFFMVTEEKVGIHQAEDAKLLCE--LDGKKR----ILCAAPGENG-VLFTGGEDRSITAW 237
+++ + + + C+ L+G + + C N + +G D + W
Sbjct: 124 NRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIW 183
Query: 238 DTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKE 297
D S K + + D H+ V + + DG L AS D C+W++
Sbjct: 184 DIKSFKCNHTLTD-HTGYVNTVTI--SPDGS-------LCASGGKDTFACLWELSSG--- 230
Query: 298 KPLPLAEAKTNSRLTCLAGSSTK 320
KPL EA+ + LA S K
Sbjct: 231 KPLYKLEARNT--INALAFSPNK 251
>ASPGD|ASPL0000070959 [details] [associations]
symbol:AN4471 species:162425 "Emericella nidulans"
[GO:0016020 "membrane" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
EMBL:BN001303 EMBL:AACD01000078 KO:K14830 eggNOG:NOG328772
RefSeq:XP_662075.1 ProteinModelPortal:Q5B4Q9
EnsemblFungi:CADANIAT00005975 GeneID:2872261 KEGG:ani:AN4471.2
HOGENOM:HOG000188788 OMA:NDFAVHP OrthoDB:EOG4VHPG0 Uniprot:Q5B4Q9
Length = 496
Score = 94 (38.1 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 55/196 (28%), Positives = 82/196 (41%)
Query: 75 LGAIHHHESSSVTSLAFYTPQNL--SVPRNLFSTSADG---FVSIFDAD-PFVL------ 122
LGA+ HH S+ +TSL+F + L + N S S VS A P V
Sbjct: 161 LGALLHH-SAPITSLSFPSRSKLLAAAEDNTISVSRTRDLTVVSTIKAPHPKVQGRPSGD 219
Query: 123 LTSVKVHKKGVNDLAVHHSGKLALTVGRDD-CLAMVNLVRGRRSFYHKIGKEA-SLIK-- 178
G+ND AVH S KL L+VG+ + C+ + NLV G+++ +E +K
Sbjct: 220 TAPPGGSPSGINDFAVHPSMKLMLSVGKGERCMRLWNLVTGKKAGVLNFDREILQSVKEG 279
Query: 179 --FDGSGEKF-FMVTEEKVGIHQAEDAKLLCELDGKKRILCAA-PGENGVL----FTGGE 230
G G K + E+ + E +L +D +C PG L +T
Sbjct: 280 RWSTGEGRKIVWNAAGEEFAV-AFEWGAVLFGIDSTP--ICRVFPGPRSKLHEIKYTSVG 336
Query: 231 DRSITAWDTNSGKVAY 246
D + A T G+V +
Sbjct: 337 DEELFAVSTEDGRVIF 352
Score = 59 (25.8 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 21/77 (27%), Positives = 36/77 (46%)
Query: 252 HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV-----RMAIKEKPLP----- 301
+ RVK +L ++ + V +A+S+GV+ VW + R AI +K
Sbjct: 385 YPGRVKSFELLNLKGQPGINDDDFAVVTANSEGVVRVWQLLGAQLRNAIAKKSSDTKDIQ 444
Query: 302 ----LAEAKTNSRLTCL 314
L+ +T +R+TCL
Sbjct: 445 VGKLLSSYETGNRITCL 461
Score = 53 (23.7 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 1 MSLIAGSYEKFIWGYKLK-PSNHYSS-------DQKTLTLTQLFSYPAHLSPI 45
+ ++ GSYE+ + G+ PS YS D + F + AH S I
Sbjct: 43 LQIVTGSYERILHGFTASVPSTCYSDGLKKSSDDGSPVQFVDTFLFEAHASAI 95
>ZFIN|ZDB-GENE-050522-296 [details] [associations]
symbol:wdr16 "WD repeat domain 16" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050522-296
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:146845 HOVERGEN:HBG055224 EMBL:BC095635
IPI:IPI00493492 RefSeq:NP_001018475.1 UniGene:Dr.80804
ProteinModelPortal:Q502N0 STRING:Q502N0 GeneID:553666
KEGG:dre:553666 InParanoid:Q502N0 NextBio:20880399
ArrayExpress:Q502N0 Uniprot:Q502N0
Length = 617
Score = 126 (49.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 52/220 (23%), Positives = 98/220 (44%)
Query: 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA--DPFVLLTSVKVHKKGVND 135
IH+ S +VT++A + + S +G V +++ D + L+ ++K HK VN
Sbjct: 409 IHNAHSMAVTTIAATNDC-----KRIVSGGGEGQVRVWEIFQDSYRLIETMKEHKATVNC 463
Query: 136 LAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT---EE 192
+ + + K +T D + +LVR R+ S++ + E++ ++T +
Sbjct: 464 IKIKSNDKECVTASSDGACIIWDLVRFVRNQMVLSNTLFSVVCYHP--EEYQIITSGTDR 521
Query: 193 KVGIHQAEDAKLLCELDGKKR--ILCAAPGENGVLF-TGGEDRSITAWDTNSGKVAYCIE 249
K+G + D + EL+G I E+G F TGG+D+ + W + G+V + +
Sbjct: 522 KIGYWEVYDGSAIRELEGSLSGSINGMHISEDGKYFVTGGDDKLLKLWLYSDGEVTH-VG 580
Query: 250 DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289
HS + + + N + S S+DG I W
Sbjct: 581 IGHSGSITNVRI---------CPNSRYIVSTSADGAILRW 611
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 112 (44.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 56/209 (26%), Positives = 95/209 (45%)
Query: 103 LFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-DDCLAMVNLVR 161
L+S S D + ++ A VL +++ H VN +A+ S AL G + A VN +
Sbjct: 261 LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMAL--STDYALRTGAFEPAEASVN-AQ 317
Query: 162 GRRSFYHKIGKEASLIKFD---GSGEKFFMVTEEKVGIH---QAEDAKLLCELDGKKRIL 215
R ++ KE +L +++ G G + + + + AED K L + G + ++
Sbjct: 318 DLRGSLQEL-KERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 376
Query: 216 ---CAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAE 272
+P ++ V+ + D+SI WD +GK + A ++G V S A+
Sbjct: 377 NQVVFSP-DSRVIASASFDKSIKLWDGRTGK--------YLASLRGHVAAVYQIAWS-AD 426
Query: 273 NPYLVASASSDGVICVWDVRMAIKEKPLP 301
+ LV S SSD + VWDV+ LP
Sbjct: 427 SRLLV-SGSSDSTLKVWDVKAQKLSTDLP 454
Score = 52 (23.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 64 IHLYDLSTSSSLG-AIHHHESSSVTSLAFYTPQNLSVP-RNLFSTSADGFVSIFD 116
I L+D ST +G A+ H S +T+L+ + P + + R + S+S DG V ++D
Sbjct: 181 ILLWDPSTGKQVGRALTGH-SKWITALS-WEPLHANPECRYVASSSKDGSVRVWD 233
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 46/190 (24%), Positives = 83/190 (43%)
Query: 103 LFSTSADGFVSIFDADPFVLLTSVK-VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR 161
LFS S D + ++D F + S + VH K + LA+ SG+ + G D + + +
Sbjct: 967 LFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLAL--SGRYLFSGGNDQIIYVWD-TE 1023
Query: 162 GRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKV-GIHQAEDAKLLCELDGKKRILCAAPG 220
++ G E ++ + F +++ V I + + L G + +
Sbjct: 1024 TLSMLFNMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSCVV 1083
Query: 221 ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASA 280
++ L++G ED SI WD ++ + Y I +HS VK ++V + SA
Sbjct: 1084 KDRYLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQ-----------IISA 1132
Query: 281 SSDGVICVWD 290
+ DG I VW+
Sbjct: 1133 AFDGSIKVWE 1142
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 57/232 (24%), Positives = 101/232 (43%)
Query: 64 IHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL 123
I L+DL+TS ++ H S SV ++AF +P + + L S+S D + ++D+ L
Sbjct: 1026 IKLWDLATSELQQSLEDH-SRSVHAVAF-SPDD----KQLASSSLDSTIKLWDSATGELQ 1079
Query: 124 TSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKE--ASLIKFDG 181
+++ H +GV + GKL + D + + N + G G+ + F
Sbjct: 1080 RTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQ-QTLTGRSDWVDSVAFSP 1138
Query: 182 SGEKFFM-VTEEKVGIHQAEDAKLLCELDGKK-RILCAAPGENGVLFTGGE-DRSITAWD 238
G++ + + + + +LL L+G RI +G L G D++ WD
Sbjct: 1139 DGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWD 1198
Query: 239 TNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290
+G++ E HS V+ + DG L+AS+S I +WD
Sbjct: 1199 PATGELLQIFE-GHSKWVESVAF--SPDGK-------LLASSSYGETIKLWD 1240
>UNIPROTKB|E1BKF9 [details] [associations]
symbol:WDR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0043231 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00620000087755
OMA:MKRIVMS EMBL:DAAA02048838 IPI:IPI00687355 UniGene:Bt.26023
ProteinModelPortal:E1BKF9 PRIDE:E1BKF9 Ensembl:ENSBTAT00000023697
NextBio:20867359 Uniprot:E1BKF9
Length = 623
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 49/173 (28%), Positives = 79/173 (45%)
Query: 125 SVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGE 184
++K HK V+ + V S + +T D + +LVR RR+ + + E
Sbjct: 459 ALKEHKSSVSCIRVKKSNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVCYHP--E 516
Query: 185 KFFMVT---EEKVGIHQAEDAKLLCELDGKKRILCAAPGEN----GVLF-TGGEDRSITA 236
+F ++T + K+ + D ++ ELDG + A G + GV F TGG D +
Sbjct: 517 EFQIITSGTDRKIAYWEVFDGSVIRELDGS--LSGAVNGMDITVEGVHFVTGGNDHLVKV 574
Query: 237 WDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289
WD N G+V + + HS + I + + G N Y+V S S+DG I W
Sbjct: 575 WDYNEGEVTH-VGVGHSGNITRIRI---SPG-----NQYIV-SVSADGAILRW 617
>TAIR|locus:2032452 [details] [associations]
symbol:AT1G24130 "AT1G24130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC002396 HOGENOM:HOG000236376 IPI:IPI00530155 PIR:T00642
RefSeq:NP_173823.1 UniGene:At.65928 ProteinModelPortal:O48679
SMR:O48679 STRING:O48679 PRIDE:O48679 EnsemblPlants:AT1G24130.1
GeneID:839025 KEGG:ath:AT1G24130 TAIR:At1g24130 InParanoid:O48679
OMA:GFRCVES PhylomeDB:O48679 ProtClustDB:CLSN2914172
Genevestigator:O48679 Uniprot:O48679
Length = 415
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 58/235 (24%), Positives = 102/235 (43%)
Query: 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV-KVHKKGVNDL 136
+HH ++ V+SLA +L L+S S D I+ F L S+ K H +N +
Sbjct: 189 VHHVDA--VSSLALSQDGSL-----LYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAI 241
Query: 137 AVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIK-----------FDGSGEK 185
V G T D + + N + S + K S + + G+ ++
Sbjct: 242 VVSKDG-FVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDR 300
Query: 186 FFMVTEEKV-GIHQAEDAKLLCELDG-KKRILCAAPGENGVLFTGGEDRSITAWDTN-SG 242
+V E + G + ++ L G +K I+C A + VL +G D+S+ W
Sbjct: 301 SILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASDLVL-SGSADKSLRVWRRGLME 359
Query: 243 KVAY-CIE--DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294
K Y C+ + H+ VK + V + +D S ++ +V S S D + VW++R++
Sbjct: 360 KEGYSCLAVLEGHTKPVKSLAV-SVSDSDSNSDYSCMVYSGSLDLSLKVWNLRVS 413
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 96 (38.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 41/186 (22%), Positives = 73/186 (39%)
Query: 64 IHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL 123
I L+D T + +H H+ + S +TP L S+S D + +++A +
Sbjct: 172 IKLWDFQTYDCVKTLHGHDHN--VSCVRFTPSG----DQLISSSRDKTIKVWEAATGYCI 225
Query: 124 TSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR-RSFYHKIGKEASLIKFDGS 182
++ H+ V + V G + D + N+V+G + Y + + F
Sbjct: 226 KTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS-- 283
Query: 183 GEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGEN-----GVLFTGGEDRSITAW 237
T + I LL +GK ++ PG N G L TG D++I W
Sbjct: 284 -------TANIIDI----PGSLLSTPEGKSKVK-QGPGGNLVGQCGYLATGSRDKTIKIW 331
Query: 238 DTNSGK 243
+ +G+
Sbjct: 332 ELATGR 337
Score = 65 (27.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 225 LFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG 284
L + G+D++I WD G+ I +AH+ + + D NP+ +A+ D
Sbjct: 361 LLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCL------D--FCLHNPH-IATGGVDD 411
Query: 285 VICVWDVR 292
VI VW ++
Sbjct: 412 VIKVWKLQ 419
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 64 IHLYDLSTSSSLGAIHHH-ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL 122
+ L+D +SS IH E +S + P + + + S+D V ++D L
Sbjct: 168 VKLWD---ASSRQLIHTFCEPGGYSSYVDFHPSSTCIA----TASSDNTVRVWDIRTHTL 220
Query: 123 LTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF-YHKIGKEASLIKFDG 181
L +VH VN L+ H SG LT D L +++L+ GR + H AS + F
Sbjct: 221 LQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSR 280
Query: 182 SGEKF 186
SG++F
Sbjct: 281 SGDQF 285
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 48/214 (22%), Positives = 88/214 (41%)
Query: 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKL 144
++TSL F +P + + S S D V +++ P HK V + S L
Sbjct: 20 AITSLDF-SPSG----KQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHL 74
Query: 145 ALTVGRDDCLAM-VNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEK-VGIHQAEDA 202
+ RD + + V V+G + + F G+ ++++ + +
Sbjct: 75 LASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQ 134
Query: 203 KLLCEL-DGKKRILCAAPGENGVLFTG-GEDRSITAWDTNSGKV--AYCIEDAHSARVKG 258
K++C L + + CA +G L +DR++ WD +S ++ +C +S+ V
Sbjct: 135 KIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDF 194
Query: 259 IVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292
ST +A+ASSD + VWD+R
Sbjct: 195 -------HPSSTC-----IATASSDNTVRVWDIR 216
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 50/203 (24%), Positives = 84/203 (41%)
Query: 66 LYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTS 125
++D ST L + H + VTS+ F+ Q L +FS S D + I+ +
Sbjct: 248 VFDKSTEQILATLKGH-TKKVTSVVFHPSQEL-----VFSASPDATIRIWSVPNTSCVQV 301
Query: 126 VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEAS-----LIKFD 180
V+ H+ V L++H +G L+ D A ++ GR K+ E S +F
Sbjct: 302 VRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGR--VLTKVTDETSGCSLTCAQFH 359
Query: 181 GSGEKFFMVT-EEKVGIHQAEDAKLLCELDGKKR-ILCAAPGENGV-LFTGGEDRSITAW 237
G F T + ++ I ++ + G I A ENG L T +D S+ W
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 238 DTNSGKVAYCIEDAHSARVKGIV 260
D K ++ ++ VK ++
Sbjct: 420 DLRKLKNFKTLQLDNNFEVKSLI 442
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 50/203 (24%), Positives = 84/203 (41%)
Query: 66 LYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTS 125
++D ST L + H + VTS+ F+ Q L +FS S D + I+ +
Sbjct: 248 VFDKSTEQILATLKGH-TKKVTSVVFHPSQEL-----VFSASPDATIRIWSVPNTSCVQV 301
Query: 126 VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEAS-----LIKFD 180
V+ H+ V L++H +G L+ D A ++ GR K+ E S +F
Sbjct: 302 VRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGR--VLTKVTDETSGCSLTCAQFH 359
Query: 181 GSGEKFFMVT-EEKVGIHQAEDAKLLCELDGKKR-ILCAAPGENGV-LFTGGEDRSITAW 237
G F T + ++ I ++ + G I A ENG L T +D S+ W
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 238 DTNSGKVAYCIEDAHSARVKGIV 260
D K ++ ++ VK ++
Sbjct: 420 DLRKLKNFKTLQLDNNFEVKSLI 442
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 50/203 (24%), Positives = 84/203 (41%)
Query: 66 LYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTS 125
++D ST L + H + VTS+ F+ Q L +FS S D + I+ +
Sbjct: 248 VFDKSTEQILATLKGH-TKKVTSVVFHPSQEL-----VFSASPDATIRIWSVPNTSCVQV 301
Query: 126 VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEAS-----LIKFD 180
V+ H+ V L++H +G L+ D A ++ GR K+ E S +F
Sbjct: 302 VRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGR--VLTKVTDETSGCSLTCAQFH 359
Query: 181 GSGEKFFMVT-EEKVGIHQAEDAKLLCELDGKKR-ILCAAPGENGV-LFTGGEDRSITAW 237
G F T + ++ I ++ + G I A ENG L T +D S+ W
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 238 DTNSGKVAYCIEDAHSARVKGIV 260
D K ++ ++ VK ++
Sbjct: 420 DLRKLKNFKTLQLDNNFEVKSLI 442
>RGD|1308151 [details] [associations]
symbol:Wdr16 "WD repeat domain 16" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308151 GO:GO:0043231 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CH473948
GeneTree:ENSGT00620000087755 CTD:124739 HOVERGEN:HBG055224
OMA:MKRIVMS EMBL:BC161799 IPI:IPI00858326 RefSeq:NP_001094438.2
UniGene:Rn.12678 Ensembl:ENSRNOT00000005066 GeneID:303233
KEGG:rno:303233 UCSC:RGD:1308151 NextBio:650909
Genevestigator:B1WBL5 Uniprot:B1WBL5
Length = 620
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 51/199 (25%), Positives = 87/199 (43%)
Query: 101 RNLFSTSADGFVSIFD--ADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158
+ + S +G V ++ L ++K HK V+ + V + + +T D + +
Sbjct: 430 KRIISGGGEGEVRVWQIGCQTQKLEEALKEHKSSVSCIRVKKNNEECVTASTDGTCIIWD 489
Query: 159 LVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT---EEKVGIHQAEDAKLLCELDGK---- 211
LVR RR+ + + E+F ++T + K+ + D ++ EL+G
Sbjct: 490 LVRLRRNQMILANTLFQCVCYHP--EEFQIITSGTDRKIAYWEVFDGSVIRELEGSLSGS 547
Query: 212 -KRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGST 270
+ GE+ V TGG D I WD N G+V + + HS + GI + + G
Sbjct: 548 VNGMDITQEGEHFV--TGGHDHLIKVWDYNEGEVTH-VGVGHSGNIMGIRI---SPG--- 598
Query: 271 AENPYLVASASSDGVICVW 289
N Y+V S S+DG I W
Sbjct: 599 --NQYIV-SVSADGAILRW 614
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 108 (43.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 103 LFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-DDCLAMVNLVR 161
L+S S D + ++ A VL +++ H VN +A+ S AL G + A VN +
Sbjct: 260 LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMAL--STDYALRTGAFEPAEASVN-AQ 316
Query: 162 GRRSFYHKIGKEASLIKFD---GSG-EKFFMVTEEKVGI--HQAEDAKLLCELDGKKRIL 215
R ++ KE +L +++ G G E+ +++ AED K L + G + ++
Sbjct: 317 DLRGSLQEL-KERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 375
Query: 216 ---CAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAE 272
+P ++ ++ + D+SI WD +GK + A ++G V S A+
Sbjct: 376 NQVLFSP-DSRIIASASFDKSIKLWDGRTGK--------YLASLRGHVAAVYQIAWS-AD 425
Query: 273 NPYLVASASSDGVICVWDVRMAIKEKPLP 301
+ LV S SSD + VWDV+ LP
Sbjct: 426 SRLLV-SGSSDSTLKVWDVKAQKLAADLP 453
Score = 52 (23.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 64 IHLYDLSTSSSLG-AIHHHESSSVTSLAFYTPQNLSVP-RNLFSTSADGFVSIFD 116
I L+D ST +G A+ H S +T+L+ + P + + R + S+S DG V ++D
Sbjct: 180 ILLWDPSTGKQVGRALAGH-SKWITALS-WEPLHANPECRYVASSSKDGSVRVWD 232
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 50/234 (21%), Positives = 96/234 (41%)
Query: 66 LYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTS 125
L +L ++S IH + +T+L NLS+ + T V ++D + ++ +
Sbjct: 194 LAELKQTASHTGIHSTGTPGITALDI--KGNLSLTGGIDKT-----VVLYDYEKEQVMQT 246
Query: 126 VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKE-ASLIKFDGSGE 184
K H K +N + +H A++ D + + + + + + I + SG+
Sbjct: 247 FKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDISLNASGD 306
Query: 185 KFFMVTEEKV-GIHQAEDAKLLCELDGKKRILCAAPG----ENGVLF-TGGEDRSITAWD 238
+++ K LC++ + A +G++F TG D + WD
Sbjct: 307 YILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWD 366
Query: 239 TNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292
+ VA H+A V+ I +EN Y +A+ S DG + +WD+R
Sbjct: 367 LKNQTVAAAFP-GHTAAVRSIAF---------SENGYYLATGSEDGEVKLWDLR 410
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 50/203 (24%), Positives = 86/203 (42%)
Query: 66 LYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTS 125
++D S+ L + H S VTS+ F+ Q+L +FS S D + I+ +
Sbjct: 249 VFDKSSEQILATLKGH-SKKVTSVVFHPSQDL-----VFSASPDATIRIWSVPNASCVQV 302
Query: 126 VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEAS-----LIKFD 180
V+ H+ V L++H +G L+ D A ++ GR K+ E+S +F
Sbjct: 303 VRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGR--VLTKVTDESSGCALTCAQFH 360
Query: 181 GSGEKFFMVT-EEKVGIHQAEDAKLLCELDGKKR-ILCAAPGENGV-LFTGGEDRSITAW 237
G F T + ++ I ++ + G I A ENG L T +D S+ W
Sbjct: 361 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 420
Query: 238 DTNSGKVAYCIEDAHSARVKGIV 260
D K ++ ++ VK ++
Sbjct: 421 DLRKLKNFKTLQLDNNFEVKSLI 443
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 115 (45.5 bits), Expect = 0.00044, P = 0.00044
Identities = 45/184 (24%), Positives = 78/184 (42%)
Query: 113 SIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR--RSFY-HK 169
SI ++L ++K H K ++ + GK + D + + G+ R+ HK
Sbjct: 29 SIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHK 88
Query: 170 IGKEASLIKFDGSGEKFFMVTEEK-VGIHQAEDAKLLCELDGKKRILCAAP--GENGVLF 226
G S I + + +++K + I E K++ L G K + ++ ++
Sbjct: 89 EG--ISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIV 146
Query: 227 TGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVI 286
+G D ++ WD N+G+ I AHS V G+ DG LV S S DG +
Sbjct: 147 SGSFDENVRIWDVNTGECTKMIS-AHSDPVTGVHF--NRDGT-------LVVSGSYDGTV 196
Query: 287 CVWD 290
+WD
Sbjct: 197 RIWD 200
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 102 (41.0 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 52/209 (24%), Positives = 95/209 (45%)
Query: 103 LFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-DDCLAMVNLVR 161
L+S S D + ++ A VL +++ H VN +A+ S AL G + A +N +
Sbjct: 211 LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMAL--STDYALRTGAFEPAEASIN-AQ 267
Query: 162 GRRSFYHKIGKEASLIKFD---GSGEKFFMVTEEKVGIHQ---AEDAKLLCELDGKKRIL 215
+ ++ K+ +L +++ G G + + + + AED K L + G + ++
Sbjct: 268 DLQGSLQEL-KDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALI 326
Query: 216 ---CAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAE 272
+P ++ ++ + D+SI WD +GK + A ++G V S A+
Sbjct: 327 NQVLFSP-DSRIIASASFDKSIKLWDGRTGK--------YLASLRGHVAAVYQIAWS-AD 376
Query: 273 NPYLVASASSDGVICVWDVRMAIKEKPLP 301
+ LV S SSD + VWDV+ LP
Sbjct: 377 SRLLV-SGSSDSTLKVWDVKAQKLAADLP 404
Score = 55 (24.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 64 IHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVP-RNLFSTSADGFVSIFD 116
I L+D ST +G + S +T L+ + P + + R + S+S DG V ++D
Sbjct: 131 ILLWDPSTGKQVGRVLAGHSKWITGLS-WEPLHANPECRYMASSSKDGSVRVWD 183
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 116 (45.9 bits), Expect = 0.00063, P = 0.00063
Identities = 47/218 (21%), Positives = 85/218 (38%)
Query: 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAV 138
H V S A + P N + L + S D + I++ P H + +
Sbjct: 13 HFKGHKDVISCADFNPNN----KQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNF 68
Query: 139 HHSGKLALTVGRDDCLAM-VNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEK-VGI 196
SG L + RD + + ++G + + + F G++ +++K V +
Sbjct: 69 APSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKV 128
Query: 197 HQAEDAKLLCELDGKKR-ILCAAPGENGVLFTG-GEDRSITAWDTNSGKVAYCIEDAHSA 254
E K L L+ + CA +G L G+DR++ WDT+S + D +
Sbjct: 129 WGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGS 188
Query: 255 RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292
+ N G+ +AS+ +D I +WD+R
Sbjct: 189 AT----FVDFNSSGTC------IASSGADNTIKIWDIR 216
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 116 (45.9 bits), Expect = 0.00065, P = 0.00065
Identities = 49/203 (24%), Positives = 85/203 (41%)
Query: 66 LYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTS 125
++D S+ L + H + VTS+ F+ Q+L +FS S D + I+ +
Sbjct: 248 VFDKSSEQILATLKGH-TKKVTSVVFHPSQDL-----VFSASPDATIRIWSVPNASCVQV 301
Query: 126 VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEAS-----LIKFD 180
V+ H+ V L++H +G L+ D A ++ GR K+ E S +F
Sbjct: 302 VRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGR--VLTKVTDETSGCSLTCAQFH 359
Query: 181 GSGEKFFMVT-EEKVGIHQAEDAKLLCELDGKKR-ILCAAPGENGV-LFTGGEDRSITAW 237
G F T + ++ I ++ + G I A ENG L T +D S+ W
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 238 DTNSGKVAYCIEDAHSARVKGIV 260
D K ++ ++ VK ++
Sbjct: 420 DLRKLKNFKTLQLDNNFEVKSLI 442
>UNIPROTKB|Q489S0 [details] [associations]
symbol:CPS_0436 "Putative uncharacterized protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:CP000083
GenomeReviews:CP000083_GR RefSeq:YP_267194.1
ProteinModelPortal:Q489S0 STRING:Q489S0 GeneID:3520483
KEGG:cps:CPS_0436 PATRIC:21464229 HOGENOM:HOG000273047 OMA:LIKFLGH
ProtClustDB:CLSK715241 BioCyc:CPSY167879:GI48-531-MONOMER
Uniprot:Q489S0
Length = 327
Score = 113 (44.8 bits), Expect = 0.00069, P = 0.00069
Identities = 43/151 (28%), Positives = 68/151 (45%)
Query: 146 LTVGRDDCLAMVNLVRGRRSFYHKIGKEASL--IKFDGSGEKFFMVTEEKVGIHQAEDAK 203
LT RD+ A+ NL G+ Y K+ +E+ + I +G+ + +H A D
Sbjct: 96 LTANRDN-FALWNLQSGKSEGYWKV-RESHIRDIAVSNNGDYLLIGKSNGTVVHVAVDTG 153
Query: 204 LLCELDG-KKRILCAAPGENG-VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVV 261
E G K++I NG V +GG D + WDT SG+V Y HS+RV + +
Sbjct: 154 RRLEFLGHKEKINSVDMLPNGRVAISGGNDFTAYVWDTQSGQVVYQFN--HSSRVSKVAL 211
Query: 262 LTKNDGGSTAENPYLVASASSDGVICVWDVR 292
A+ Y ++ S G +WD++
Sbjct: 212 --------DAKARYAFSADSMKGAY-IWDLK 233
>TIGR_CMR|CPS_0436 [details] [associations]
symbol:CPS_0436 "conserved hypothetical protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:CP000083
GenomeReviews:CP000083_GR RefSeq:YP_267194.1
ProteinModelPortal:Q489S0 STRING:Q489S0 GeneID:3520483
KEGG:cps:CPS_0436 PATRIC:21464229 HOGENOM:HOG000273047 OMA:LIKFLGH
ProtClustDB:CLSK715241 BioCyc:CPSY167879:GI48-531-MONOMER
Uniprot:Q489S0
Length = 327
Score = 113 (44.8 bits), Expect = 0.00069, P = 0.00069
Identities = 43/151 (28%), Positives = 68/151 (45%)
Query: 146 LTVGRDDCLAMVNLVRGRRSFYHKIGKEASL--IKFDGSGEKFFMVTEEKVGIHQAEDAK 203
LT RD+ A+ NL G+ Y K+ +E+ + I +G+ + +H A D
Sbjct: 96 LTANRDN-FALWNLQSGKSEGYWKV-RESHIRDIAVSNNGDYLLIGKSNGTVVHVAVDTG 153
Query: 204 LLCELDG-KKRILCAAPGENG-VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVV 261
E G K++I NG V +GG D + WDT SG+V Y HS+RV + +
Sbjct: 154 RRLEFLGHKEKINSVDMLPNGRVAISGGNDFTAYVWDTQSGQVVYQFN--HSSRVSKVAL 211
Query: 262 LTKNDGGSTAENPYLVASASSDGVICVWDVR 292
A+ Y ++ S G +WD++
Sbjct: 212 --------DAKARYAFSADSMKGAY-IWDLK 233
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 103 (41.3 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 53/208 (25%), Positives = 93/208 (44%)
Query: 103 LFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-DDCLAMVNL-- 159
L+S S D + ++ A VL +++ H VN +A+ S AL G + A VN
Sbjct: 262 LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMAL--STDYALRTGAFEPAEATVNAQD 319
Query: 160 VRGR-RSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGI--HQAEDAKLLCELDGKKRIL- 215
++G + + +L++ G E+ +++ AED K L + G + ++
Sbjct: 320 LQGSLKELKERASSRYNLVRGQGP-ERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALIN 378
Query: 216 --CAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAEN 273
+P ++ ++ + D+SI WD +GK + A ++G V S A++
Sbjct: 379 QVLFSP-DSRIVASASFDKSIKLWDGRTGK--------YLASLRGHVAAVYQIAWS-ADS 428
Query: 274 PYLVASASSDGVICVWDVRMAIKEKPLP 301
LV S SSD + VWDV+ LP
Sbjct: 429 RLLV-SGSSDSTLKVWDVKAQKLTTDLP 455
Score = 54 (24.1 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 64 IHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVP-RNLFSTSADGFVSIFD 116
I L+D ST + +G S +T L+ + P +++ R + S+S DG V ++D
Sbjct: 182 ILLWDPSTGTQVGRTLTGHSKWITGLS-WEPLHMNPECRYVASSSKDGSVRVWD 234
>TAIR|locus:2062994 [details] [associations]
symbol:AT2G46290 "AT2G46290" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009506 EMBL:CP002685 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003743 GO:GO:0080008
KO:K03246 OMA:ATVAGWS IPI:IPI00519717 RefSeq:NP_182152.2
UniGene:At.36529 ProteinModelPortal:F4II66 SMR:F4II66 PRIDE:F4II66
EnsemblPlants:AT2G46290.1 GeneID:819237 KEGG:ath:AT2G46290
Uniprot:F4II66
Length = 355
Score = 113 (44.8 bits), Expect = 0.00081, P = 0.00081
Identities = 53/206 (25%), Positives = 84/206 (40%)
Query: 103 LFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG 162
LFS + D +++ AD L + + H V + +T D + ++ G
Sbjct: 52 LFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSG 111
Query: 163 RRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVG----IHQ---AEDAK--------LLCE 207
+ F K G A + F + T+ VG IH AED + +L
Sbjct: 112 KELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSSAIHVKRIAEDPEDQVGDSVLVLQS 171
Query: 208 LDGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKND 266
DGKK+I A G N + +GGED +I WD +GK+ D + I L K
Sbjct: 172 PDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQ-SDEEVGHKEAITSLCK-- 228
Query: 267 GGSTAENPYLVASASSDGVICVWDVR 292
A++ + + + S D +WD+R
Sbjct: 229 ---AADDSHFL-TGSHDKTAKLWDMR 250
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 115 (45.5 bits), Expect = 0.00085, P = 0.00085
Identities = 49/203 (24%), Positives = 84/203 (41%)
Query: 66 LYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTS 125
++D S+ L + H + VTS+ F+ Q L +FS S D + I+ +
Sbjct: 248 VFDKSSEQILATLKGH-TKKVTSVVFHPSQEL-----VFSASPDATIRIWSVPNASCVQV 301
Query: 126 VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEAS-----LIKFD 180
V+ H+ V L++H +G L+ D A ++ GR K+ E S +F
Sbjct: 302 VRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGR--VLTKVTDETSGCSLTCAQFH 359
Query: 181 GSGEKFFMVT-EEKVGIHQAEDAKLLCELDGKKR-ILCAAPGENGV-LFTGGEDRSITAW 237
G F T + ++ I ++ + G I A ENG L T +D S+ W
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 238 DTNSGKVAYCIEDAHSARVKGIV 260
D K ++ ++ VK ++
Sbjct: 420 DLRKLKNFKTLQLDNNFEVKSLI 442
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 115 (45.5 bits), Expect = 0.00085, P = 0.00085
Identities = 49/203 (24%), Positives = 84/203 (41%)
Query: 66 LYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTS 125
++D S+ L + H + VTS+ F+ Q L +FS S D + I+ +
Sbjct: 248 VFDKSSEQILATLKGH-TKKVTSVVFHPSQEL-----VFSASPDATIRIWSVPNASCVQV 301
Query: 126 VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEAS-----LIKFD 180
V+ H+ V L++H +G L+ D A ++ GR K+ E S +F
Sbjct: 302 VRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGR--VLTKVTDETSGCSLTCAQFH 359
Query: 181 GSGEKFFMVT-EEKVGIHQAEDAKLLCELDGKKR-ILCAAPGENGV-LFTGGEDRSITAW 237
G F T + ++ I ++ + G I A ENG L T +D S+ W
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 238 DTNSGKVAYCIEDAHSARVKGIV 260
D K ++ ++ VK ++
Sbjct: 420 DLRKLKNFKTLQLDNNFEVKSLI 442
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 115 (45.5 bits), Expect = 0.00087, P = 0.00087
Identities = 49/203 (24%), Positives = 84/203 (41%)
Query: 66 LYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTS 125
++D S+ L + H + VTS+ F+ Q L +FS S D + I+ +
Sbjct: 257 VFDKSSEQILATLKGH-TKKVTSVVFHPSQEL-----VFSASPDATIRIWSVPNASCVQV 310
Query: 126 VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEAS-----LIKFD 180
V+ H+ V L++H +G L+ D A ++ GR K+ E S +F
Sbjct: 311 VRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGR--VLTKVTDETSGCSLTCAQFH 368
Query: 181 GSGEKFFMVT-EEKVGIHQAEDAKLLCELDGKKR-ILCAAPGENGV-LFTGGEDRSITAW 237
G F T + ++ I ++ + G I A ENG L T +D S+ W
Sbjct: 369 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 428
Query: 238 DTNSGKVAYCIEDAHSARVKGIV 260
D K ++ ++ VK ++
Sbjct: 429 DLRKLKNFKTLQLDNNFEVKSLI 451
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 343 325 0.00087 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 608 (65 KB)
Total size of DFA: 215 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.49u 0.09s 26.58t Elapsed: 00:00:01
Total cpu time: 26.50u 0.09s 26.59t Elapsed: 00:00:01
Start: Sat May 11 09:53:57 2013 End: Sat May 11 09:53:58 2013