BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019326
(343 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NWT1|PK1IP_HUMAN p21-activated protein kinase-interacting protein 1 OS=Homo sapiens
GN=PAK1IP1 PE=1 SV=2
Length = 392
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 169/316 (53%), Gaps = 19/316 (6%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGT 60
M L+AG YE+ ++G+ + P D + TL F++ AH + ++ VAV+ +G
Sbjct: 1 MELVAGCYEQVLFGFAVHPEPEACGDHEQWTLVADFTHHAHTASLSAVAVNSRFVVTGSK 60
Query: 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
D+TIH+YD+ GA+ HH S ++T L FY R+L S + DG + I+DA +
Sbjct: 61 DETIHIYDMKKKIEHGALVHH-SGTITCLKFYGN------RHLISGAEDGLICIWDAKKW 113
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
L S+K HK V L++H SGKLAL+VG D L NLV GR +F I + A ++++
Sbjct: 114 ECLKSIKAHKGQVTFLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNIKQNAHIVEWS 173
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
GE++ ++ + K+ I+Q + A + + +KRI VL G++ I +D +
Sbjct: 174 PRGEQYVVIIQNKIDIYQLDTASISGTITNEKRISSVKFLSESVLAVAGDEEVIRFFDCD 233
Query: 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENP--YLVASASSDGVICVWDVRMAIKEK 298
S V C AH RVK + + E P +++ SASSDG I +W ++ K
Sbjct: 234 S-LVCLCEFKAHENRVKDMF---------SFEIPEHHVIVSASSDGFIKMWKLKQDKKVP 283
Query: 299 PLPLAEAKTNSRLTCL 314
P L E TN+RLTCL
Sbjct: 284 PSLLCEINTNARLTCL 299
>sp|Q6TNS2|PK1IP_DANRE p21-activated protein kinase-interacting protein 1-like OS=Danio
rerio GN=pak1ip1 PE=2 SV=1
Length = 368
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 173/329 (52%), Gaps = 25/329 (7%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGT 60
+ L+AG YE+ ++GY++ P++ + T+ F++ AH + + V+ S A+G
Sbjct: 12 IELVAGCYEQIVFGYRVCPAD------EEWTIEPTFTHHAHTASLNAVSSSNQFIATGSK 65
Query: 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
D+TI LYD+ + GA+ HH+ + ++ L FY +L S DG + ++ +
Sbjct: 66 DETIQLYDMCKKTEHGALLHHDGT-ISCLEFYGTSHL------LSGGQDGLICVWSTKKW 118
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
L +++ HK V L+VH SGKLAL+VG D L NL+ GR +F I + A ++ +
Sbjct: 119 ECLKTIRAHKGQVTSLSVHPSGKLALSVGTDKTLRTWNLIEGRSAFIKNIKQNAEIVLWS 178
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
G+K+ +V +KV I+ + A ++ + KRI C +N +L GG+D S+ +D
Sbjct: 179 PDGDKYAVVVNDKVDIYTLDSATIIGTIAFTKRISCLKFLKNSLLAVGGDDESVRIYDVT 238
Query: 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPL 300
S K C AH RVK I K+D ++ +AS+DG I +W + + E P
Sbjct: 239 SQKCV-CEFKAHENRVKAIESFMKDDF-------CVLVTASNDGFIKLWKLNLESIESPT 290
Query: 301 PLAEAKTNSRLTCLA----GSSTKSFKRP 325
L + T +RLTCL G + ++ ++P
Sbjct: 291 LLGQLNTTARLTCLCVWMPGETKETAEQP 319
>sp|Q9DCE5|PK1IP_MOUSE p21-activated protein kinase-interacting protein 1 OS=Mus musculus
GN=Pak1ip1 PE=2 SV=2
Length = 382
Score = 161 bits (407), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 166/314 (52%), Gaps = 15/314 (4%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGT 60
M L+AGSYE+ ++G+ ++ S Q+T T F++ +H + ++ +A + SG
Sbjct: 1 MELVAGSYEQVLFGFTVQRGPAKSGHQETWTPVADFTHHSHTASLSVLASNSRYVVSGSK 60
Query: 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
D+TIH+YD+ GA+ HH + +VT L F+ Q+L S + DG + I+D +
Sbjct: 61 DETIHIYDMKRKVEHGALVHH-AGTVTCLKFHGNQHL------ISGAEDGHICIWDVKRW 113
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
L + K H+ V L++H SGKLAL+VG D L NL+ GR +F I + A ++++
Sbjct: 114 KCLKTFKAHRGHVTFLSIHPSGKLALSVGTDKTLRTWNLIEGRSAFIKNIKENAHIVEWS 173
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
SG K+ +V + KV +++ A + + KRI + VL G++ + +D +
Sbjct: 174 PSGGKYIVVVQNKVDVYRLGTASVSGTITNGKRISSVTFLSDSVLAVAGDEEVVRIFDCD 233
Query: 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPL 300
S + C AH RVK +V D +++ +AS+DG I +W + K P
Sbjct: 234 SLE-CLCEFRAHENRVKDMVSFEVPDH-------HVLVTASNDGFIKMWTLPQDKKVPPS 285
Query: 301 PLAEAKTNSRLTCL 314
L EAKT +RLTCL
Sbjct: 286 LLCEAKTGARLTCL 299
>sp|Q68FJ6|PK1IP_XENLA p21-activated protein kinase-interacting protein 1-like OS=Xenopus
laevis GN=pak1ip1 PE=2 SV=1
Length = 363
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 168/317 (52%), Gaps = 22/317 (6%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGT 60
+ L+ G YE+ ++GY++ H +Q + F++ AH + ++ +AV+ A+G
Sbjct: 5 IKLLVGCYEQVLFGYRV----HREGEQWLSSAD--FTHHAHTASVSVLAVNNRFVATGSR 58
Query: 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
D+TI +YD+ GA+ HH + ++T L FY +L S + DG + +++ +
Sbjct: 59 DETIQIYDMKKKVEHGALLHH-NGTITCLEFYGNTHL------LSGAEDGLICVWNTKKW 111
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
+ K HK V L++H SGKLAL+VG D L NLV GR +F I K A ++ +
Sbjct: 112 ECQQTFKAHKGQVLSLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNIKKNAHIVHWS 171
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
SGEK+ +V + V ++Q E A ++ ++ KRI A + ++ G++ I +DT
Sbjct: 172 PSGEKYVVVIHDTVDVYQLETAAVVGTINNPKRISSAQFITDALIAVAGDEEVIRLYDTA 231
Query: 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA-IKEKP 299
S K C AH RVK + V+ + ++V S+SSDG I +W + M ++ P
Sbjct: 232 SQKCV-CEFKAHENRVKNLHVI-------ELQGTHVVVSSSSDGYIKMWRIDMEKVQTSP 283
Query: 300 LPLAEAKTNSRLTCLAG 316
L E T++RLTCL+
Sbjct: 284 SLLCEVSTSARLTCLSA 300
>sp|Q5ZKU8|PK1IP_CHICK p21-activated protein kinase-interacting protein 1-like OS=Gallus
gallus GN=PAK1IP1 PE=2 SV=1
Length = 369
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 162/316 (51%), Gaps = 23/316 (7%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGT 60
M L+AG YE+ ++G+ +P + T+T F++ AH + ++ VAV+ +G
Sbjct: 1 MELVAGCYEQILFGFAARPGEPW-------TVTPDFTHHAHTASLSAVAVNSKYVVTGSR 53
Query: 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
D++I +YD+ GA+ H + ++T L FY +L S + DG + I++ +
Sbjct: 54 DESIQIYDMRKKVEHGALLQH-NGTITCLEFYGTAHL------LSGAEDGLICIWNTKRW 106
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
L S+K HK V L++H SGKLAL+VG D L NLV GR +F + + A +IK+
Sbjct: 107 ECLKSIKAHKGHVTSLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNLKQNAHIIKWS 166
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
GEK+ V KV I++ + A + + +KRI + VL G+D I + +
Sbjct: 167 PDGEKYVTVITNKVDIYKLDTASITGTITIEKRISSIRFITDSVLAIAGDDEIIRFYSCD 226
Query: 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM-AIKEKP 299
S K C A R+K I + E +++ +ASSDG I VW++ + I P
Sbjct: 227 SQK-CLCEFKARENRIKDIYSFER-------EGQHVIVTASSDGYIKVWNLDLNKINNVP 278
Query: 300 LPLAEAKTNSRLTCLA 315
L E T +RLTCLA
Sbjct: 279 SLLCEVSTKARLTCLA 294
>sp|Q5EA99|PK1IP_BOVIN p21-activated protein kinase-interacting protein 1 OS=Bos taurus
GN=PAK1IP1 PE=2 SV=1
Length = 392
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 166/316 (52%), Gaps = 19/316 (6%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGT 60
M ++AG YE+ ++G+ + P ++ F++ AH + ++ VAV+ +G
Sbjct: 1 MEVVAGCYEQVLFGFAVHPEPVGDGHRERWAPVADFTHHAHTASLSAVAVNSRFVVTGSK 60
Query: 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
D+TIH+YD+ GA+ HH + ++T L F+ R+L S + DG + ++DA +
Sbjct: 61 DETIHIYDMKKKVDHGALMHH-NGTITCLKFHGN------RHLISGAEDGLICVWDARRW 113
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
L S++ HK V L++H SG+LAL+VG D L NLV GR +F I + A ++++
Sbjct: 114 ECLKSIRAHKGHVTFLSIHPSGRLALSVGTDKTLRTWNLVEGRSAFIKNIKQSAHIVEWS 173
Query: 181 GSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240
GEK+ +V ++ ++Q + A + + ++R+ VL G++ + +D +
Sbjct: 174 PKGEKYVVVILNRIDVYQLDTASVSGTITNERRVSSVTFLSESVLTVAGDEEVVRFFDCD 233
Query: 241 SGKVAYCIED--AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEK 298
S C+ + AH RVK + T E+ LV +ASSDG I +W ++ K
Sbjct: 234 S---LTCLSEFKAHENRVKDMFSF------ETPEHHVLV-TASSDGFIKMWKLKQDKKVS 283
Query: 299 PLPLAEAKTNSRLTCL 314
P L E TN+RLTCL
Sbjct: 284 PSLLCEINTNARLTCL 299
>sp|O74453|SKB15_SCHPO Shk1 kinase-binding protein 15 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=skb15 PE=4 SV=1
Length = 341
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 156/342 (45%), Gaps = 43/342 (12%)
Query: 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGT 60
+ + G+Y I+G +D + L+ + AH +T +AV G AS +
Sbjct: 2 LRFVVGTYTHLIYGV--------DADIERKKCKPLWLFEAHEGALTALAVDGIYLASTSS 53
Query: 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRN-LFSTSADGFVSIFDADP 119
D+TI ++D + + + + S T +A +++ +N L + +G +S++
Sbjct: 54 DETIKIFDHTRNVQIADV-----SVPTDIANACIRDMCFTKNHLLACHDNGQISMWSKGS 108
Query: 120 FVLLTSVKVHK-KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIK 178
++L+ ++K KG+ +AVH S KLALTVG D L + +LVRG+ + I
Sbjct: 109 WLLVHTLKSSSHKGITGIAVHPSEKLALTVGGDGKLRLWDLVRGKGGKVLPLSTIPESIL 168
Query: 179 FDGSGEKFFMVTEEKVGIHQAE-DAKLLCELDGKKRI--LCAAPGENGVLFTGGEDRSIT 235
F E F++ + GI + D L K ++ LC + L G ++ ++
Sbjct: 169 F--LNESSFVIMSRR-GIDAFKLDLTSLFSFSSKSQLNALCLYQSK---LIVGRDNGTVL 222
Query: 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM-A 294
DT+ GK+ + AH RVK + + + YL+ +ASSDG +C+WD
Sbjct: 223 VLDTSDGKILHEFT-AHKKRVKSVYPV----------DDYLI-TASSDGSVCIWDKDWNL 270
Query: 295 IKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQ-IGDSAPKGE 335
+ E +P +R+TC+ S P+ + D A K +
Sbjct: 271 VIEHNIP-----EGNRITCMVAMLADSNSEPKNVEDEAAKRQ 307
>sp|P20484|MAK11_YEAST Protein MAK11 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=MAK11 PE=1 SV=1
Length = 468
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 156/353 (44%), Gaps = 56/353 (15%)
Query: 3 LIAGSYEKFIWGYKLKPSNHYSSDQ-KTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTD 61
+I GSYE I L N +D KT +F + AH I +AVS SG D
Sbjct: 66 IIVGSYEHNILCLSLDIPNQKENDAAKTPHFMPIFHFQAHSLSIKCLAVSRRYLVSGSND 125
Query: 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTP----QNLSVPRN------LFSTSADGF 111
+ I +YDL LG + H+ S+T+L F P ++ +V + L S S D
Sbjct: 126 EHIRIYDLQKRKELGTLLSHQ-GSITALQFSHPASSSEDAAVSKGSKNSKWLLSASEDHK 184
Query: 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG 171
+ ++ + + ++K H VND+ +H + ++A++V D + + NL+ R + K+
Sbjct: 185 IMVWRVKDWETVGTLKGHTARVNDVDIHPTNRIAISVSDDHSIRLWNLMTLRNAAVLKLR 244
Query: 172 K---EASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVL-F 226
K + +++ G+ +F V ++V I++ AK+ E+ +++ L E +L F
Sbjct: 245 KYNTNGTCVRWLGAKGDYFAVGLRDRVLIYETGSAKVFKEIVFQRKTLMHI--ETHILPF 302
Query: 227 TGGEDRSITAWDTN-----SGKVAYCIED--------------------AHSARVKGIVV 261
E S+ D N ++ +E+ H+ R+K
Sbjct: 303 DNKEYLSVGISDGNVHFYPCEELFEKVEENEKQEDDDDKEDISPAFSLLGHTNRIKDFKF 362
Query: 262 LTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCL 314
T N+ G+ YLV + SDG I VWD M+ KE+ +A RL CL
Sbjct: 363 YT-NEFGT-----YLV-TIGSDGKIVVWD--MSTKEQ---VAVYDCGERLNCL 403
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 113/250 (45%), Gaps = 15/250 (6%)
Query: 24 SSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHES 83
S + T L ++ ++ +S + SG A+GG D +HL+ ++ + + ++ H +
Sbjct: 5 SPTKTTWKLQEIVAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGH-T 63
Query: 84 SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGK 143
+ V S+ F + L + + S G + I+D + +L ++ HK V+ L H G+
Sbjct: 64 TPVESVRFNNSEEL-----IVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGE 118
Query: 144 LALTVGRDDCLAMVNLVRGRRSFYHKIGKEA-SLIKFDGSGEKFFMVTEE-KVGIHQAED 201
+ D + + ++ R F +K +A ++F G+ +++ V +
Sbjct: 119 FVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTA 178
Query: 202 AKLLCELD---GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKG 258
K++ EL G I+ P E +L +G DR++ WD ++ C E + V+
Sbjct: 179 GKMMAELSEHKGPVNIIEFHPNEY-LLASGSADRTVRFWDLEKFQLVGCTE-GETIPVRA 236
Query: 259 IVVLTKNDGG 268
I L NDGG
Sbjct: 237 I--LFSNDGG 244
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 32 LTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAF 91
L ++ ++ +++S + SG A+GG D ++L+ ++ + + ++ H +S V S+
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGH-TSPVESVRL 71
Query: 92 YTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD 151
TP+ L + + S G + ++D + +L ++ HK + L H G+ + +D
Sbjct: 72 NTPEEL-----IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQD 126
Query: 152 DCLAMVNLVRGRRSFYHKIGKEA-SLIKFDGSGEKFFMVTEE-KVGIHQAEDAKLLCELD 209
+ + ++ R F ++ +A ++F G+ ++ V + K++ E
Sbjct: 127 TNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 210 GKK---RILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE 249
G ++ P E +L +G DR+I WD +V CIE
Sbjct: 187 GHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIE 228
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 32 LTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAF 91
L ++ ++ +++S + SG A+GG D ++L+ ++ + + ++ H +S V S+
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGH-TSPVESVRL 71
Query: 92 YTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD 151
TP+ L + + S G + ++D + +L ++ HK + L H G+ + +D
Sbjct: 72 NTPEEL-----IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQD 126
Query: 152 DCLAMVNLVRGRRSFYHKIGKEA-SLIKFDGSGEKFFMVTEE-KVGIHQAEDAKLLCELD 209
+ + ++ R F ++ +A ++F G+ ++ V + K++ E
Sbjct: 127 TNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 210 GKK---RILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE 249
G ++ P E +L +G DR+I WD +V CIE
Sbjct: 187 GHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIE 228
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 26/266 (9%)
Query: 34 QLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAF 91
+L + H S + +V S G ASG D T+ L+D+S+ L H +S V S+ F
Sbjct: 898 ELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGH-TSRVRSVVF 956
Query: 92 YTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD 151
+P +L L S S+D V ++D L + H V +A + G + L G
Sbjct: 957 -SPNSLM----LASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSM-LATGSG 1010
Query: 152 DCLAMVNLVRGRRSFYHKIGKEASL--IKFDGSGEKFFMVTEEK-VGIHQAEDAKLLCEL 208
D + + + FY G + + + F G ++++ V + L L
Sbjct: 1011 DQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTL 1070
Query: 209 DGKK---RILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKN 265
G R + +P + +L +GG+D+ + WD +SG Y ++ +++ V+ +V
Sbjct: 1071 QGHTSCVRSVVFSP-DGAMLASGGDDQIVRLWDISSGNCLYTLQ-GYTSWVRFLVF---- 1124
Query: 266 DGGSTAENPYLVASASSDGVICVWDV 291
+ N +A+ SSD ++ +WD+
Sbjct: 1125 -----SPNGVTLANGSSDQIVRLWDI 1145
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 115/273 (42%), Gaps = 40/273 (14%)
Query: 35 LFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFY 92
L ++ H S + +V + G+ ASG +D T+ L+D+S+S L H ++ V S+AF
Sbjct: 1235 LCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGH-TNWVNSVAFN 1293
Query: 93 TPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD 152
++ L S S D V +++ L + + H V+ + G + L G DD
Sbjct: 1294 PDGSM-----LASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTM-LASGSDD 1347
Query: 153 CLAMVNLVRGRRSFYHKIGKEASL----------IKFDGSGEKFFMVTEEKVGIHQAEDA 202
+ + Y +G + I GSG+ + V +
Sbjct: 1348 QTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGD-------QTVRLWSISSG 1400
Query: 203 KLLCELDGKKRI---LCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGI 259
K L L G + +P + +L +G +D+++ W+ +SG+ Y + H V+ +
Sbjct: 1401 KCLYTLQGHNNWVGSIVFSP-DGTLLASGSDDQTVRLWNISSGECLYTLH-GHINSVRSV 1458
Query: 260 VVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292
+DG ++AS S D I +WDV+
Sbjct: 1459 AF--SSDG-------LILASGSDDETIKLWDVK 1482
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 24/264 (9%)
Query: 35 LFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFY 92
+ + H S + +V S G ASG D T+ L+D+S+ + L + H +S V S+ F
Sbjct: 1025 FYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGH-TSCVRSVVF- 1082
Query: 93 TPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD 152
+P L S D V ++D L +++ + V L +G + L G D
Sbjct: 1083 SPDGAM----LASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNG-VTLANGSSD 1137
Query: 153 CLAMVNLVRGRRSFYHKIG--KEASLIKFDGSGEKFFMVT-EEKVGIHQAEDAKLLCELD 209
+ + + ++ Y G + + F G + ++ V + +K L L
Sbjct: 1138 QIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQ 1197
Query: 210 GKKRILCAA--PGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDG 267
G + + + L +G D+++ W+ NS K C H++ V +V N
Sbjct: 1198 GHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSK-CLCTFQGHTSWVNSVVF---NPD 1253
Query: 268 GSTAENPYLVASASSDGVICVWDV 291
GS ++AS SSD + +WD+
Sbjct: 1254 GS------MLASGSSDKTVRLWDI 1271
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 116/271 (42%), Gaps = 38/271 (14%)
Query: 35 LFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFY 92
L++ H + + VA S G ASG D T+ L+D+S+S L + H +S V S+ F
Sbjct: 1151 LYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGH-TSWVNSVVF- 1208
Query: 93 TPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD 152
P L S S+D V +++ + L + + H VN + + G + + D
Sbjct: 1209 NPDG----STLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDK 1264
Query: 153 CLAMVNL--------VRGRRSFYHKIG--KEASLIKFDGSGEKFFMVTEEKVGIHQAEDA 202
+ + ++ +G ++ + + + S++ GSG ++ V + + +
Sbjct: 1265 TVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLA-SGSG-------DQTVRLWEISSS 1316
Query: 203 KLLCELDGKKRILCAA--PGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIV 260
K L G + + + +L +G +D+++ W +SG+ Y H+ V ++
Sbjct: 1317 KCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFL-GHTNWVGSVI 1375
Query: 261 VLTKNDGGSTAENPYLVASASSDGVICVWDV 291
DG ++AS S D + +W +
Sbjct: 1376 F--SPDGA-------ILASGSGDQTVRLWSI 1397
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 25 SDQKTLTLTQ------LFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLG 76
SD +T+ L L+++ H + + +V S G ASG D T+ L+ +S+ L
Sbjct: 1345 SDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLY 1404
Query: 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDL 136
+ H ++ V S+ F L L S S D V +++ L ++ H V +
Sbjct: 1405 TLQGH-NNWVGSIVFSPDGTL-----LASGSDDQTVRLWNISSGECLYTLHGHINSVRSV 1458
Query: 137 AVHHSGKLALTVGRDD 152
A G L L G DD
Sbjct: 1459 AFSSDG-LILASGSDD 1473
>sp|Q5ZMA2|PRP19_CHICK Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1
Length = 505
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 97/247 (39%), Gaps = 54/247 (21%)
Query: 57 SGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFD 116
+GG D + ++D S+ L + H S VTS+ F+ Q+L +FS S D + I+
Sbjct: 240 TGGADKNVIVFDKSSEQILATLKGH-SKKVTSVVFHPSQDL-----VFSASPDATIRIWS 293
Query: 117 ADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASL 176
+ V+ H+ V L++H +G L+ D A ++ GR L
Sbjct: 294 VPNASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGR-----------VL 342
Query: 177 IKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLF-TGGEDRSIT 235
K VT+E G C L CA +G++F TG D I
Sbjct: 343 TK----------VTDESSG----------CALT------CAQFHPDGLIFGTGTMDSQIK 376
Query: 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295
WD + HS + I +EN Y +A+A+ D + +WD+R
Sbjct: 377 IWDLKE-RTNVANFPGHSGPITSIAF---------SENGYYLATAADDSSVKLWDLRKLK 426
Query: 296 KEKPLPL 302
K L L
Sbjct: 427 NFKTLQL 433
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 18/97 (18%)
Query: 195 GIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSA 254
G+H A +L LD LC P + + TGG D+++ +D +S ++ ++ HS
Sbjct: 216 GLHSASIPGILA-LD-----LC--PSDTNKILTGGADKNVIVFDKSSEQILATLK-GHSK 266
Query: 255 RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291
+V +V D LV SAS D I +W V
Sbjct: 267 KVTSVVFHPSQD---------LVFSASPDATIRIWSV 294
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 33 TQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLA 90
T + ++P H PIT++A S G A+ D ++ L+DL + + + V SL
Sbjct: 384 TNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLI 443
Query: 91 F 91
F
Sbjct: 444 F 444
>sp|Q9UMS4|PRP19_HUMAN Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1
Length = 504
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 97/247 (39%), Gaps = 54/247 (21%)
Query: 57 SGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFD 116
+GG D + ++D S+ L + H + VTS+ F+ Q+L +FS S D + I+
Sbjct: 239 TGGADKNVVVFDKSSEQILATLKGH-TKKVTSVVFHPSQDL-----VFSASPDATIRIWS 292
Query: 117 ADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASL 176
+ V+ H+ V L++H +G L+ D A ++ GR L
Sbjct: 293 VPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGR-----------VL 341
Query: 177 IKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLF-TGGEDRSIT 235
K VT+E G C L CA +G++F TG D I
Sbjct: 342 TK----------VTDETSG----------CSLT------CAQFHPDGLIFGTGTMDSQIK 375
Query: 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295
WD + HS + I +EN Y +A+A+ D + +WD+R
Sbjct: 376 IWDLKE-RTNVANFPGHSGPITSIAF---------SENGYYLATAADDSSVKLWDLRKLK 425
Query: 296 KEKPLPL 302
K L L
Sbjct: 426 NFKTLQL 432
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 18/101 (17%)
Query: 194 VGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHS 253
VG+H A +L LD LC P + + TGG D+++ +D +S ++ ++ H+
Sbjct: 214 VGLHSASIPGILA-LD-----LC--PSDTNKILTGGADKNVVVFDKSSEQILATLK-GHT 264
Query: 254 ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294
+V +V D LV SAS D I +W V A
Sbjct: 265 KKVTSVVFHPSQD---------LVFSASPDATIRIWSVPNA 296
>sp|P42527|MHCKA_DICDI Myosin heavy chain kinase A OS=Dictyostelium discoideum GN=mhkA PE=1
SV=2
Length = 1146
Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 28/261 (10%)
Query: 35 LFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTP 94
L++ H I ++A + + D+TI ++ + + ++ + +L +T
Sbjct: 905 LYTVNGHRKSIESIACNSNYIFTSSPDNTIKVHIIRSGNT---------KCIETLVGHTG 955
Query: 95 QNLSVPRN---LFSTSADGFVSIFDADPFVLLTSVK-VHKKGVNDLAVHHSGKLALTVGR 150
+ V N LFS S D + ++D F + S + VH K + LA+ SG+ + G
Sbjct: 956 EVNCVVANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLAL--SGRYLFSGGN 1013
Query: 151 DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKV-GIHQAEDAKLLCELD 209
D + + + ++ G E ++ + F +++ V I + + L
Sbjct: 1014 DQIIYVWD-TETLSMLFNMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLK 1072
Query: 210 GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGS 269
G + + ++ L++G ED SI WD ++ + Y I +HS VK ++V
Sbjct: 1073 GHWNSVSSCVVKDRYLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQ---- 1128
Query: 270 TAENPYLVASASSDGVICVWD 290
+ SA+ DG I VW+
Sbjct: 1129 -------IISAAFDGSIKVWE 1142
Score = 35.4 bits (80), Expect = 0.68, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 29 TLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTS 88
T TL+ LF+ H + ++ + + S D+ I ++DLS S + + H +S +
Sbjct: 1022 TETLSMLFNMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSC 1081
Query: 89 LAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV-KVHKKGVNDLAV 138
+ R L+S S D + ++D D + ++ K H GV L V
Sbjct: 1082 VV--------KDRYLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMV 1124
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 98/249 (39%), Gaps = 53/249 (21%)
Query: 45 ITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLF 104
IT + + G + +GG D T+ LYD + H + + ++ + P N++
Sbjct: 214 ITALDIKGNLSLTGGIDKTVVLYDYEKEQVMQTFKGH-NKKINAVVLH-PDNITA----I 267
Query: 105 STSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR 164
S SAD + ++ A + VH+ V D++++ SG L+ D A ++ G+
Sbjct: 268 SASADSHIRVWSATDSSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGK- 326
Query: 165 SFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGV 224
SL K S E + + H +G+
Sbjct: 327 ----------SLCKV--SVEPGSQIAVHSIEFH-----------------------PDGL 351
Query: 225 LF-TGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD 283
+F TG D + WD + VA H+A V+ I +EN Y +A+ S D
Sbjct: 352 IFGTGAADAVVKIWDLKNQTVAAAFP-GHTAAVRSIAF---------SENGYYLATGSED 401
Query: 284 GVICVWDVR 292
G + +WD+R
Sbjct: 402 GEVKLWDLR 410
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 112/250 (44%), Gaps = 15/250 (6%)
Query: 24 SSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHES 83
S + T L ++ ++ + +S + SG A+GG D ++L+ ++ + + ++ H +
Sbjct: 5 SPTKTTWKLQEIVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGH-T 63
Query: 84 SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGK 143
+ V S+ F + L + + S G + ++D + +L ++ HK V L H G
Sbjct: 64 TPVESVRFNNAEEL-----IVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGD 118
Query: 144 LALTVGRDDCLAMVNLVRGRRSFYHKIGKEA-SLIKFDGSGEKFFMVTEE-KVGIHQAED 201
+ D + + ++ R F +K +A ++F G+ +++ V +
Sbjct: 119 FVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTA 178
Query: 202 AKLLCELD---GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKG 258
K++ EL G I+ P E +L +G DR++ WD ++ C E + V+
Sbjct: 179 GKMMAELSEHKGPVNIIEFHPNEY-LLASGSADRTVRFWDLEKFQLIGCTE-GETIPVRA 236
Query: 259 IVVLTKNDGG 268
I L +DGG
Sbjct: 237 I--LFSSDGG 244
>sp|Q7ZVF0|POC1A_DANRE POC1 centriolar protein homolog A OS=Danio rerio GN=poc1a PE=2 SV=1
Length = 416
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHH-ESSSVTSLAFYTPQNLSVPRNLFSTSADG 110
G S D T+ L+D +SS IH E +S + P + + + S+D
Sbjct: 156 GQLMVSVSDDRTVKLWD---ASSRQLIHTFCEPGGYSSYVDFHPSSTCIA----TASSDN 208
Query: 111 FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF-YHK 169
V ++D LL +VH VN L+ H SG LT D L +++L+ GR + H
Sbjct: 209 TVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHG 268
Query: 170 IGKEASLIKFDGSGEKF 186
AS + F SG++F
Sbjct: 269 HQGSASCVSFSRSGDQF 285
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 23/214 (10%)
Query: 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKL 144
++TSL F +P + + S S D V +++ P HK V + S L
Sbjct: 20 AITSLDF-SPSG----KQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHL 74
Query: 145 ALTVGRDDCLAM-VNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEK-VGIHQAEDA 202
+ RD + + V V+G + + F G+ ++++ + +
Sbjct: 75 LASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQ 134
Query: 203 KLLCEL-DGKKRILCAAPGENGVLFTG-GEDRSITAWDTNSGKV--AYCIEDAHSARVKG 258
K++C L + + CA +G L +DR++ WD +S ++ +C +S+ V
Sbjct: 135 KIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVD- 193
Query: 259 IVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292
+ +A+ASSD + VWD+R
Sbjct: 194 -----------FHPSSTCIATASSDNTVRVWDIR 216
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 108/267 (40%), Gaps = 58/267 (21%)
Query: 27 QKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSV 86
++ L +L ++ ++++ + +SG +GG D ++L+ + + + ++ H +S V
Sbjct: 4 KRAWKLQELVAHSSNVNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGH-TSPV 62
Query: 87 TSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLAL 146
S+ F + + L V + S G + I+D +P ++ ++ H+ + + H G+
Sbjct: 63 DSVKFNSSEELVV-----AGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVA 117
Query: 147 TVGRDDCLAMVNLVRGRRSFYHKIG--KEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKL 204
+ D + + + VR + Y G + ++IKF G+
Sbjct: 118 SGSTDTNVKLWD-VRRKGCIYTYKGHSDQVNMIKFSPDGK-------------------- 156
Query: 205 LCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTK 264
L T ED +I WD GK+ ++ H+ V GI
Sbjct: 157 -------------------WLVTASEDTTIKLWDLTMGKLFQEFKN-HTGGVTGI----- 191
Query: 265 NDGGSTAENPYLVASASSDGVICVWDV 291
N +L+AS SSD + WD+
Sbjct: 192 ----EFHPNEFLLASGSSDRTVQFWDL 214
>sp|Q9NDC9|LIS1_CAEEL Lissencephaly-1 homolog OS=Caenorhabditis elegans GN=lis-1 PE=2
SV=1
Length = 404
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 40/274 (14%)
Query: 41 HLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLS 98
H PIT V T AS D TI ++D T + H + +V +A +
Sbjct: 105 HRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGH-TDAVNDIAID-----A 158
Query: 99 VPRNLFSTSADGFVSIFD-ADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMV 157
+ L S S+D + ++D + L S+K H+ V+ + +G L+ RD +
Sbjct: 159 AGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQW 218
Query: 158 NLVRGRRSF-YHKIGKEASLIKFDGSGEKFFMVTEEK---VGIHQAEDAKLLCELDGKKR 213
++ G + + +I+ G F + ++ V + AKL+ D +
Sbjct: 219 DISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLR-DHEHA 277
Query: 214 ILCA--AP--------------GENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVK 257
+ C AP +LF+G DRSI AW+ N+G V + + AH V+
Sbjct: 278 VECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLL-AHENWVR 336
Query: 258 GIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291
G+ K YL+ S + D + VW++
Sbjct: 337 GLAFHPK--------GKYLI-SVADDKTLRVWEL 361
>sp|Q54S59|WDR61_DICDI WD repeat-containing protein 61 homolog OS=Dictyostelium discoideum
GN=wdr61 PE=4 SV=1
Length = 299
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 115/303 (37%), Gaps = 68/303 (22%)
Query: 4 IAGSYEKFIW------------GYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITT--VA 49
I G++E IW G K + + + LT ++F H+ +T+ +
Sbjct: 8 ITGAHEDGIWCVKWQGDIIATGGMGTKVKTWHGNQPQFLTERKVFD--KHILGVTSLDID 65
Query: 50 VSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109
+ A+GG D T+ L+DLST++ H++ L L+ NL S S
Sbjct: 66 IGARYLATGGMDGTVRLFDLSTNT------LHKTIDSGPLGCLKIGFLNSANNLVSVSES 119
Query: 110 GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK 169
G +SI+ + L S+ K V +A+ + + G D + ++ GRR
Sbjct: 120 GNISIYSVETGEKLRSISNTNKQVLTMAISPNNEQIAVAGLDGTVLCYDVESGRR----- 174
Query: 170 IGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGG 229
S IK G V I R LC + ++ +FTG
Sbjct: 175 ----VSEIKAHG------------VPI----------------RSLCFSS-DSKTIFTGA 201
Query: 230 EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289
ED I D NS HS+ + +V + D L +S S D +C+W
Sbjct: 202 EDSQIRLHDPNSSNPYIASLLGHSSFIFSLVASSNGD--------LLASSGSIDRKVCIW 253
Query: 290 DVR 292
D++
Sbjct: 254 DIK 256
>sp|Q8NA23|WDR31_HUMAN WD repeat-containing protein 31 OS=Homo sapiens GN=WDR31 PE=2 SV=1
Length = 367
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 109/281 (38%), Gaps = 58/281 (20%)
Query: 39 PAHLSPITTVA-VSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNL 97
PAH+ ++ VA ++ SGG D T+ Y+ T + + HE +T +A
Sbjct: 59 PAHMDTVSVVAALNSDLCVSGGKDKTVVAYNWKTGNVVKRFKGHE-HEITKVA------- 110
Query: 98 SVPR--NLFSTSADGFVSIFD----ADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD 151
+P+ FS S D V ++D + P L H V LAV T RD
Sbjct: 111 CIPKSSQFFSASRDRMVMMWDLHGSSQPRQQLCG---HAMVVTGLAVSPDSSQLCTGSRD 167
Query: 152 DCLAMVNLVRG--------------------RRSFYHKIGKEASLIKFDGSGEKFFMVTE 191
+ L + ++V G R + + ++ +L +D G + +
Sbjct: 168 NTLLLWDVVTGQSVERASVSRNVVTHLCWVPREPYILQTSEDKTLRLWDSRGLQVAHMFP 227
Query: 192 EKVGIHQAEDAKLLCE--LDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE 249
K I + CE +DG K I C+ NG GGE T WD + C
Sbjct: 228 AKQHI------QTYCEVSVDGHKCISCS----NGF---GGEGCEATLWDLRQTRNRICEY 274
Query: 250 DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290
H V V L + + A P L+A++S D + +W+
Sbjct: 275 KGHFQTVASCVFLPR----ALALMP-LIATSSHDCKVKIWN 310
>sp|Q8I0F4|LIS1_DICDI Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1
SV=1
Length = 419
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 78/202 (38%), Gaps = 32/202 (15%)
Query: 51 SGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG 110
+G AS D TI L+D T + +H H+ + S +TP L S+S D
Sbjct: 159 TGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHN--VSCVRFTPSG----DQLISSSRDK 212
Query: 111 FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR-----RS 165
+ +++A + ++ H+ V + V G + D + N+V+G R
Sbjct: 213 TIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYRE 272
Query: 166 FYHKIG----KEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGE 221
H + A++I GS E K + Q L+ G+
Sbjct: 273 HSHVVECLAFSTANIIDIPGS---LLSTPEGKSKVKQGPGGNLV--------------GQ 315
Query: 222 NGVLFTGGEDRSITAWDTNSGK 243
G L TG D++I W+ +G+
Sbjct: 316 CGYLATGSRDKTIKIWELATGR 337
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 26/142 (18%)
Query: 47 TVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFST 106
TV+ G+ AS D TI +++ L H S V LAF T + +P +L ST
Sbjct: 239 TVSEDGSCIASCSNDQTIKTWNIVKGECLATYREH-SHVVECLAFSTANIIDIPGSLLST 297
Query: 107 -------------------------SADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHS 141
S D + I++ L + H V + H
Sbjct: 298 PEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPC 357
Query: 142 GKLALTVGRDDCLAMVNLVRGR 163
GK L+VG D + + ++ +GR
Sbjct: 358 GKFLLSVGDDKTIRVWDIAQGR 379
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC227.12 PE=4 SV=1
Length = 462
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 21/166 (12%)
Query: 31 TLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTS 88
T +L H I ++A G+ +SGG D ++DL + S+ + H + +
Sbjct: 296 TGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEH-IRQIVA 354
Query: 89 LAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG--KLAL 146
+A ++P L ++SAD V I+D L ++ H V+D+ SG +
Sbjct: 355 MA-WSPNGY----QLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIA 409
Query: 147 TVGRDDCLAMVN-----LVRGRRSFYHKIGKEASLIKFDGSGEKFF 187
T G D C+ + N L++ +G E ++ DG G++F
Sbjct: 410 TSGYDGCVKLWNPLNCSLIKS------MVGHEEKVMSVDGYGDRFI 449
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 96/255 (37%), Gaps = 55/255 (21%)
Query: 44 PITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNL---- 97
PI V S G ASG + +++ S + H + V+ L +Y
Sbjct: 174 PIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGH-TDRVSGLDWYPLCQAWDAD 232
Query: 98 SVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMV 157
S L + +AD V ++ A L ++ H V +A H SG ++ D +
Sbjct: 233 SEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLW 292
Query: 158 NLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCA 217
++ G L+ +G E F + C+ DG
Sbjct: 293 DVHTG-----------VELLMQEGHSEGIFSIA---------------CQPDGS------ 320
Query: 218 APGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLV 277
++ +GG D WD SGK + + D H ++ IV + + + N Y +
Sbjct: 321 ------LVSSGGNDAIGRIWDLRSGK-SIMVLDEH---IRQIVAM------AWSPNGYQL 364
Query: 278 ASASSDGVICVWDVR 292
A++S+D + +WD+R
Sbjct: 365 ATSSADDTVKIWDLR 379
>sp|Q2KIY3|WDFY1_BOVIN WD repeat and FYVE domain-containing protein 1 OS=Bos taurus
GN=WDFY1 PE=2 SV=1
Length = 410
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 94/236 (39%), Gaps = 25/236 (10%)
Query: 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIF----DADPFVLLTSVKVHKKG 132
+I+H +S +++A++ R +F +G V F D + + + H+
Sbjct: 62 SIYHTMASPCSAMAYHHDS-----RRIFVGQDNGAVMEFHVSEDFNKMNFIKTYPAHQNR 116
Query: 133 VNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFM---- 188
V + + + ++ G D C++ + G H AS +++D + F+
Sbjct: 117 VTAIIFSLATEWVISTGHDKCVSWMCTRSGNMLGRHFFSSWASCLQYDFDTQYAFVGDYS 176
Query: 189 --VTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAY 246
+T K+ L +G L P + +LF+G D S+ WD K
Sbjct: 177 GQITLLKLEQSTCSVITTLKGHEGSIACLWWDPIQR-LLFSGASDNSVIMWDIGGRKGRT 235
Query: 247 CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPL 302
+ H RV+ + L + + S SSDG I VW++ ++ +E P L
Sbjct: 236 LLLQGHHDRVQALCYL---------QLTRQLVSCSSDGGIAVWNMDVSREEAPQWL 282
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Query: 35 LFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFY 92
L+S H + + S G AS D T+ ++D++ + ++ S + +
Sbjct: 137 LYSLTEHTNWVRCARFSPDGRLIASCSDDKTVRIWDITNRLCINTFVDYKGHS--NYVDF 194
Query: 93 TPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD 152
P V S D V ++D LL +VH GVN L+ H SG LT D
Sbjct: 195 NPMGTCVA----SAGVDSTVKVWDIRTNKLLQHYQVHNAGVNSLSFHPSGNYLLTASNDG 250
Query: 153 CLAMVNLVRGRRSFYHKIGKEASL--IKFDGSGEKF 186
+ +++L+ GR Y G + + + F SG++F
Sbjct: 251 TVKILDLLEGRL-IYTLHGHQGPVLSVAFSKSGDQF 285
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 73/198 (36%), Gaps = 18/198 (9%)
Query: 101 RNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAM-VNL 159
+ L S+SAD V I++ P HK+ V + SG L + +D + +
Sbjct: 31 KQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTCVQFSPSGHLVASSSKDRTVRLWAPN 90
Query: 160 VRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEK-VGIHQAEDAKLLCEL-DGKKRILCA 217
++G S + F G F +++K + + L L + + CA
Sbjct: 91 IKGESSVLKAHTAVVRCVNFSSDGHTFITASDDKSIKAWNLHRQRFLYSLTEHTNWVRCA 150
Query: 218 APGENGVLFTG-GEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPY- 275
+G L +D+++ WD + CI V K NP
Sbjct: 151 RFSPDGRLIASCSDDKTVRIWDITN---RLCI---------NTFVDYKGHSNYVDFNPMG 198
Query: 276 -LVASASSDGVICVWDVR 292
VASA D + VWD+R
Sbjct: 199 TCVASAGVDSTVKVWDIR 216
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 29/190 (15%)
Query: 118 DPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEA-SL 176
DP L K HK V + GK + D C+ + N R++ + KEA +
Sbjct: 7 DP-ALQRHFKGHKDAVTYVDFSPDGKQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTC 65
Query: 177 IKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRIL--------CAAPGENGVLF-T 227
++F SG ++++ A + K G+ +L C +G F T
Sbjct: 66 VQFSPSGHLVASSSKDRTVRLWAPNIK------GESSVLKAHTAVVRCVNFSSDGHTFIT 119
Query: 228 GGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVIC 287
+D+SI AW+ + + Y + + H+ V+ DG L+AS S D +
Sbjct: 120 ASDDKSIKAWNLHRQRFLYSLTE-HTNWVR--CARFSPDGR-------LIASCSDDKTVR 169
Query: 288 VWDV--RMAI 295
+WD+ R+ I
Sbjct: 170 IWDITNRLCI 179
>sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB
PE=2 SV=1
Length = 732
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 106/265 (40%), Gaps = 22/265 (8%)
Query: 26 DQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSS 85
D K+ + + + H P+ ++ + SG +D +I ++DL + + H+
Sbjct: 486 DYKSQNMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPV 545
Query: 86 VTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLA 145
T L + LFS S+D + ++D +++ H + V L + SG+
Sbjct: 546 HTVLL--------NDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCI--SGQYL 595
Query: 146 LTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEK-VGIHQAEDAKL 204
+ D + + +L R ++ K G + G + + +K + + + +
Sbjct: 596 FSGSNDKTIKVWDLKTFRCNYTLK-GHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLEC 654
Query: 205 LCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTK 264
L G R + + +LFT +D +I WD + + +E H+A V+ + V
Sbjct: 655 SATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLE-GHNATVQCLAVW-- 711
Query: 265 NDGGSTAENPYLVASASSDGVICVW 289
E+ V S S D I VW
Sbjct: 712 -------EDKKCVISCSHDQSIRVW 729
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 14/138 (10%)
Query: 25 SDQKTLTLTQL------FSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAI 78
S+ KT+ + L ++ H +TT+ + GT SG D TI +++L + +
Sbjct: 599 SNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLECSATL 658
Query: 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAV 138
H+ + + + LF+ S D + I+D + T+++ H V LAV
Sbjct: 659 RGHDR--------WVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAV 710
Query: 139 HHSGKLALTVGRDDCLAM 156
K ++ D + +
Sbjct: 711 WEDKKCVISCSHDQSIRV 728
Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 22/157 (14%)
Query: 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDD 62
L +GS +K I + LK TL ++ +H + T+ +SG SG D
Sbjct: 555 LFSGSSDKTIKVWDLK------------TLECKYTLESHARAVKTLCISGQYLFSGSNDK 602
Query: 63 TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL 122
TI ++DL T + H + VT++ + NL+S S D + +++
Sbjct: 603 TIKVWDLKTFRCNYTLKGH-TKWVTTICI-------LGTNLYSGSYDKTIRVWNLKSLEC 654
Query: 123 LTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159
+++ H + V + + KL T D+ + + +L
Sbjct: 655 SATLRGHDRWVEHMVI--CDKLLFTASDDNTIKIWDL 689
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 203 KLLC--ELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIV 260
KL C L+G + + + LF+G D++I WD + + Y +E +H+ VK +
Sbjct: 531 KLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLE-SHARAVKTLC 589
Query: 261 VLTKNDGGSTAENPYLVASASSDGVICVWDVR 292
+ YL S S+D I VWD++
Sbjct: 590 I----------SGQYLF-SGSNDKTIKVWDLK 610
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 225 LFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG 284
LF+G D SI WD + + +E H V +++ N + S SSD
Sbjct: 515 LFSGSSDHSIKVWDLKKLRCIFTLE-GHDKPVHTVLL-----------NDKYLFSGSSDK 562
Query: 285 VICVWDVR 292
I VWD++
Sbjct: 563 TIKVWDLK 570
>sp|Q8IWB7|WDFY1_HUMAN WD repeat and FYVE domain-containing protein 1 OS=Homo sapiens
GN=WDFY1 PE=1 SV=1
Length = 410
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 25/236 (10%)
Query: 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIF----DADPFVLLTSVKVHKKG 132
+I+H +S +++A++ R +F +G V F D + + + H+
Sbjct: 62 SIYHTMASPCSAMAYHHDS-----RRIFVGQDNGAVMEFHVSEDFNKMNFIKTYPAHQNR 116
Query: 133 VNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFM---- 188
V+ + + + ++ G D C++ + G H AS +++D + F+
Sbjct: 117 VSAIIFSLATEWVISTGHDKCVSWMCTRSGNMLGRHFFTSWASCLQYDFDTQYAFVGDYS 176
Query: 189 --VTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAY 246
+T K+ + L +G L P + +LF+G D SI WD K
Sbjct: 177 GQITLLKLEQNTCSVITTLKGHEGSVACLWWDPIQR-LLFSGASDNSIIMWDIGGRKGRT 235
Query: 247 CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPL 302
+ H +V+ + L + + S SSDG I VW++ ++ +E P L
Sbjct: 236 LLLQGHHDKVQSLCYL---------QLTRQLVSCSSDGGIAVWNMDVSREEAPQWL 282
>sp|Q229Z6|POC1_TETTS POC1 centriolar protein homolog OS=Tetrahymena thermophila (strain
SB210) GN=TTHERM_01308010 PE=3 SV=1
Length = 634
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 18/181 (9%)
Query: 24 SSDQKTLTLTQL------FSYPAHLSPITTVAVSGTA--AASGGTDDTIHLYDLSTSSSL 75
SSD KTL L +L S+ H + + + +S ASG D T+ L+DL+ +
Sbjct: 149 SSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIV 208
Query: 76 GAIHH-HESSSVTSLAFYTPQNLSVPRNLF--------STSADGFVSIFDADPFVLLTSV 126
++ ++ + Y+ +V + LF S+S D + I D L+
Sbjct: 209 SKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHY 268
Query: 127 KVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF-YHKIGKEASLIKFDGSGEK 185
H VN +++H +G + G D + + +L +GR+ + + K+ + ++F+ SG+
Sbjct: 269 NAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDY 328
Query: 186 F 186
F
Sbjct: 329 F 329
>sp|Q99973|TEP1_HUMAN Telomerase protein component 1 OS=Homo sapiens GN=TEP1 PE=1 SV=2
Length = 2627
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 9/141 (6%)
Query: 46 TTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNL 103
T VA S G AA G + T++L DL T E S V+ + L
Sbjct: 1680 TAVAFSTNGQRAAVGTANGTVYLLDLRT-------WQEEKSVVSGCDGISACLFLSDDTL 1732
Query: 104 FSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR 163
F T+ DG + ++D + K H+ + + +L TV CL + + VRG+
Sbjct: 1733 FLTAFDGLLELWDLQHGCRVLQTKAHQYQITGCCLSPDCRLLATVCLGGCLKLWDTVRGQ 1792
Query: 164 RSFYHKIGKEASLIKFDGSGE 184
+F H K + + F G+
Sbjct: 1793 LAFQHTYPKSLNCVAFHPEGQ 1813
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
Query: 197 HQAEDAKLLCELDGKKRIL--CAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIED---A 251
H+AED EL G + + C+ + G L TGG DRS+ WD + K I
Sbjct: 2046 HKAEDFPCGTELRGHEGPVSCCSFSTDGGSLATGGRDRSLLCWDVRTPKTPVLIHSFPAC 2105
Query: 252 HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290
H V G TK++ L+ S SSDG + +WD
Sbjct: 2106 HRDWVTG-CAWTKDN---------LLISCSSDGSVGLWD 2134
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 33/272 (12%)
Query: 3 LIAGSYEKF---IWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAAS 57
L+A + E F +W +L H + D T + H P++ + S G + A+
Sbjct: 2024 LLASASEDFTVQLWPRQLLTRPHKAEDFPCGTELR-----GHEGPVSCCSFSTDGGSLAT 2078
Query: 58 GGTDDTIHLYDLSTSSSLGAIHHHESSS---VTSLAFYTPQNLSVPRNLFSTSADGFVSI 114
GG D ++ +D+ T + IH + VT A +T NL L S S+DG V +
Sbjct: 2079 GGRDRSLLCWDVRTPKTPVLIHSFPACHRDWVTGCA-WTKDNL-----LISCSSDGSVGL 2132
Query: 115 FDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN----LVRGRRSFYHKI 170
+D + L H+ V+ AV + ++V RD L + + + + I
Sbjct: 2133 WDPESGQRLGQFLGHQSAVS--AVAAVEEHVVSVSRDGTLKVWDHQGVELTSIPAHSGPI 2190
Query: 171 GKEASLIKFDGSGE---KFFMVTEEKVGIHQAEDAKLLCE----LDGKKRILCAAPGE-N 222
A+ ++ +G+ + +VT G + L+C+ L + AA E +
Sbjct: 2191 SHCAAAMEPRAAGQPGSELLVVTVGLDGATRLWHPLLVCQTHTLLGHSGPVRAAAVSETS 2250
Query: 223 GVLFTGGEDRSITAWDTNSGKVAYCIEDAHSA 254
G++ T ED S+ W CI + +A
Sbjct: 2251 GLMLTASEDGSVRLWQVPKEADDTCIPRSSAA 2282
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 96/245 (39%), Gaps = 41/245 (16%)
Query: 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
D IH++D+++ L + H + V ++AF L L S S D V ++D
Sbjct: 480 DKLIHVWDVASGDELHTLEGH-TDWVRAVAFSPDGAL-----LASGSDDATVRLWDVAAA 533
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
+ H V D+A G + + RD + N+ G E +++K
Sbjct: 534 EERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVA---------TGTEHAVLK-- 582
Query: 181 GSGEKFFMVTEEKVGIHQAEDAK-----LLCELDGKKRILCAAPGEN---------GVLF 226
G + + V G A ++ L GK+R + AP EN G +
Sbjct: 583 GHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSML 642
Query: 227 TGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVI 286
G D ++ WD SG+ + E H+ V+ + DG L+AS S D I
Sbjct: 643 VHGSDSTVHLWDVASGEALHTFE-GHTDWVRAVAF--SPDGA-------LLASGSDDRTI 692
Query: 287 CVWDV 291
+WDV
Sbjct: 693 RLWDV 697
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 23/264 (8%)
Query: 34 QLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAF 91
+L + H + VA S G ASG D T+ L+D++ + H + V +AF
Sbjct: 493 ELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGH-THYVLDIAF 551
Query: 92 YTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD 151
++ + S S DG +++ +K H V +A G + + RD
Sbjct: 552 SPDGSM-----VASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRD 606
Query: 152 DCLAMVNLVRGR-RSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDG 210
+ + ++ G+ R + + F G ++ V + + L +G
Sbjct: 607 GTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEG 666
Query: 211 KK---RILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDG 267
R + +P + +L +G +DR+I WD + + +E H+ V + +
Sbjct: 667 HTDWVRAVAFSP-DGALLASGSDDRTIRLWDVAAQEEHTTLE-GHTEPVHSVAFHPE--- 721
Query: 268 GSTAENPYLVASASSDGVICVWDV 291
G+T +ASAS DG I +W +
Sbjct: 722 GTT------LASASEDGTIRIWPI 739
>sp|Q96P53|WDFY2_HUMAN WD repeat and FYVE domain-containing protein 2 OS=Homo sapiens
GN=WDFY2 PE=2 SV=2
Length = 400
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 24/249 (9%)
Query: 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
D T+ ++ S +H S S + P+ + L + + F+ D +
Sbjct: 45 DRTVRVWLKRDSGQYWPSVYHAMPSPCSCMSFNPETRRLSIGLDNGTISEFILSEDYNKM 104
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
+ + + H+ V + + L+ G+D A G+R ++ AS ++FD
Sbjct: 105 TPVKNYQAHQSRVTMILFVLELEWVLSTGQDKQFAWHCSESGQRLGGYRTSAVASGLQFD 164
Query: 181 GSGEKFFM------VTEEKVGIHQAEDAKLLCELDGKK---RILCAAPGENGVLFTGGED 231
F+ VT K+ + E+ L+ G LC P + VLF+G D
Sbjct: 165 VETRHVFIGDHSGQVTILKL---EQENCTLVTTFRGHTGGVTALCWDPVQR-VLFSGSSD 220
Query: 232 RSITAWDTNSGKVAYCIE-DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290
S+ WD G+ IE H+ RV+ + S A++ + S DG I VW+
Sbjct: 221 HSVIMWDIG-GRKGTAIELQGHNDRVQAL---------SYAQHTRQLISCGGDGGIVVWN 270
Query: 291 VRMAIKEKP 299
+ + +E P
Sbjct: 271 MDVERQETP 279
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 74/197 (37%), Gaps = 14/197 (7%)
Query: 101 RNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160
+ + + S D F+ ++ P HK V L G L + RD + + L
Sbjct: 31 KQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLD 90
Query: 161 R-GRRSFYHKIGKEASLIKFDGSGEKFFMVTEEK-VGIHQAEDAKLLCELDGKKR-ILCA 217
R G+ S + + F G+ +E+K + + + L L + CA
Sbjct: 91 RKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCA 150
Query: 218 APGENGVLFTG-GEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYL 276
+G L ED++I WDT S + D S V + N
Sbjct: 151 KFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSD--SVGFANFVDFSPNGT--------C 200
Query: 277 VASASSDGVICVWDVRM 293
+ASA SD + +WD+RM
Sbjct: 201 IASAGSDHAVRIWDIRM 217
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF 111
G S D TI ++D T+S + +S + ++P + S +D
Sbjct: 156 GRLIVSCSEDKTIKIWD--TTSKQCVNNFSDSVGFANFVDFSPNGTCIA----SAGSDHA 209
Query: 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR 163
V I+D LL +VH GVN L+ H SG +T D + +++LV GR
Sbjct: 210 VRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGR 261
Score = 34.7 bits (78), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 51 SGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG 110
+GT AS G+D + ++D+ + L H S V L+F+ N +L + S+DG
Sbjct: 197 NGTCIASAGSDHAVRIWDIRMNRLLQHYQVH-SCGVNCLSFHPSGN-----SLVTASSDG 250
Query: 111 FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD 151
V I D L+ +++ H V ++ G+L + G D
Sbjct: 251 TVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGAD 291
>sp|Q4V7Z1|POC1B_XENLA POC1 centriolar protein homolog B OS=Xenopus laevis GN=poc1b PE=1
SV=1
Length = 468
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 35 LFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFY 92
LFS H + + S G AS D T+ ++DL+ + ++ S Y
Sbjct: 137 LFSLTQHTNWVRCARFSPDGRLIASCSDDKTVRIWDLTNRLCINTFVDYKGHS-----NY 191
Query: 93 TPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD 152
N + + S AD V ++D LL +VH GV+ L+ H SG LT D
Sbjct: 192 VDFN-QMGTCVASAGADSTVKVWDIRMNKLLQHYQVHNAGVSSLSFHPSGNYLLTASSDG 250
Query: 153 CLAMVNLVRGRRSFYHKIGKEASL--IKFDGSGEKF 186
L +++L+ GR Y G + + + F SG++F
Sbjct: 251 TLKILDLLEGRL-IYTLHGHQGPVLSVTFSKSGDQF 285
Score = 39.3 bits (90), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 18/199 (9%)
Query: 101 RNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAM-VNL 159
+ L S+SAD V I++ P HK+ V + SG L + +D + +
Sbjct: 31 KQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTCVQFSPSGHLVASSSKDRTVRLWAPN 90
Query: 160 VRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEK-VGIHQAEDAKLLCELDGKKR-ILCA 217
++G + + F G+ F +++K + + L L + CA
Sbjct: 91 IKGESTVLKAHTAVVRCVNFSSDGQTFITASDDKSIKAWNLHRQRFLFSLTQHTNWVRCA 150
Query: 218 APGENGVLFTG-GEDRSITAWD-TNSGKVAYCIE-DAHSARVKGIVVLTKNDGGSTAENP 274
+G L +D+++ WD TN + ++ HS V N G+
Sbjct: 151 RFSPDGRLIASCSDDKTVRIWDLTNRLCINTFVDYKGHSNYVDF------NQMGT----- 199
Query: 275 YLVASASSDGVICVWDVRM 293
VASA +D + VWD+RM
Sbjct: 200 -CVASAGADSTVKVWDIRM 217
>sp|Q8BUB4|WDFY2_MOUSE WD repeat and FYVE domain-containing protein 2 OS=Mus musculus
GN=Wdfy2 PE=2 SV=2
Length = 400
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 24/249 (9%)
Query: 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
D T+ ++ S +H S S + P+ + L + + F+ D +
Sbjct: 45 DRTVRVWLKRDSGQYWPSIYHAMPSPCSCMSFNPETRRLSIGLDNGTISEFILSEDYNKM 104
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180
+ + + H+ V + + L+ G+D A G+R ++ AS ++FD
Sbjct: 105 TPVKNYQAHQSRVTMVLFVLELEWVLSTGQDKQFAWHCSESGQRLGGYRTSAVASGLQFD 164
Query: 181 GSGEKFFM------VTEEKVGIHQAEDAKLLCELDGKK---RILCAAPGENGVLFTGGED 231
F+ VT K+ + E+ LL G LC P + VLF+G D
Sbjct: 165 VETRHVFIGDHSGQVTILKL---EQENCTLLTSFRGHTGGVTALCWDPVQR-VLFSGSSD 220
Query: 232 RSITAWDTNSGKVAYCIE-DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290
S+ WD G+ IE H+ +V+ + S A++ + S DG I VW+
Sbjct: 221 HSVIMWDIG-GRKGTAIELQGHNDKVQAL---------SYAQHTRQLISCGGDGGIVVWN 270
Query: 291 VRMAIKEKP 299
+ + +E P
Sbjct: 271 MDVERQETP 279
>sp|B3S4I5|LIS1_TRIAD Lissencephaly-1 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_50647
PE=3 SV=1
Length = 409
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 98/263 (37%), Gaps = 40/263 (15%)
Query: 37 SYPAHLSPITTVAVSG--TAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTP 94
S H SPIT V S D ++ ++D + + H + SV LAF +
Sbjct: 102 SLSGHRSPITCVVFHPVYNVMVSSSEDASMKIWDYESGDFERTLRGH-TDSVQDLAFDSS 160
Query: 95 QNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCL 154
L L S+SAD V I+D F +++ H V+ + SG L+ RD +
Sbjct: 161 GKL-----LASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGDFLLSSSRDKTI 215
Query: 155 AMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLL--CELDGKK 212
M + G + F+G E +V + A D L+ C D
Sbjct: 216 KMWEVATG-----------YCVYNFEGHREWV-----RRVAV--ASDGSLMASCSNDQTV 257
Query: 213 RILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAE 272
RI + E G E V CI+ A + + I + + +
Sbjct: 258 RIWSLSSKECKEELRGHE------------HVVECIKWAPESCNRYINEASGTEVPKGQK 305
Query: 273 NPYLVASASSDGVICVWDVRMAI 295
+ +AS S D VI +WDV A+
Sbjct: 306 SGPFLASGSRDRVIKIWDVTTAV 328
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 27/165 (16%)
Query: 24 SSDQKTLTLTQL------FSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSL 75
SS KT+ + ++ +++ H + VAV+ G+ AS D T+ ++ LS+
Sbjct: 209 SSRDKTIKMWEVATGYCVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIWSLSSKECK 268
Query: 76 GAIHHHESSSVTSLAFYTPQNLS----------VPRN------LFSTSADGFVSIFDADP 119
+ HE V + P++ + VP+ L S S D + I+D
Sbjct: 269 EELRGHEH--VVECIKWAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVIKIWDVTT 326
Query: 120 FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR 164
V L S+ H V LA H GK LT DD + +R +R
Sbjct: 327 AVCLFSLVGHDNWVRGLAFHAGGKY-LTSASDDKTIKIWELRHKR 370
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 34/248 (13%)
Query: 56 ASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIF 115
AS TD ++ L+++ST + H + V ++ F+ PQ + + + SAD V ++
Sbjct: 994 ASASTDSSVRLWNISTGQCFQILLEH-TDWVYAVVFH-PQG----KIIATGSADCTVKLW 1047
Query: 116 DADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR-----RSFYHKI 170
+ L ++ H + +A G+L + D + + + GR R +++
Sbjct: 1048 NISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRV 1107
Query: 171 GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRIL--CAAPGENGVLFT 227
F +GE T++ V I + K L L G + A + +L +
Sbjct: 1108 YSAI----FSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILAS 1163
Query: 228 GGEDRSITAWDTNSGKVAY-CIEDAHSARVKGIVVLTKNDGGSTAENP--YLVASASSDG 284
D+++ WD N+GK + CI H S A +P +VAS S D
Sbjct: 1164 ASHDQTVRIWDVNTGKCHHICIGHTHLV-------------SSVAFSPDGEVVASGSQDQ 1210
Query: 285 VICVWDVR 292
+ +W+V+
Sbjct: 1211 TVRIWNVK 1218
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 104/270 (38%), Gaps = 32/270 (11%)
Query: 33 TQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLA 90
T L + H + VA S G AS D TI L+D+S L + H + V S+A
Sbjct: 759 TCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSH-TGWVRSVA 817
Query: 91 FYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLAL---- 146
F + L S S D + I++ L + H V +A K+ +
Sbjct: 818 FSAD-----GQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSG 872
Query: 147 --TVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT-EEKVGIHQAEDAK 203
T+ DC + + H E + F G+ V+ ++ V + +
Sbjct: 873 DRTIKLWDCQTHICI-----KTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQ 927
Query: 204 LLCELDGKK--RILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVV 261
L G + A + +L +G D+++ WD +GK +E H+ + GI
Sbjct: 928 CLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLE-GHTDFIYGIAF 986
Query: 262 LTKNDGGSTAENPYLVASASSDGVICVWDV 291
+ + +ASAS+D + +W++
Sbjct: 987 ---------SPDSQTLASASTDSSVRLWNI 1007
>sp|Q8N1V2|WDR16_HUMAN WD repeat-containing protein 16 OS=Homo sapiens GN=WDR16 PE=1 SV=3
Length = 620
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 29/276 (10%)
Query: 22 HYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHH 81
H SS+++ L +T P G + S D I + T + I++
Sbjct: 360 HTSSNRELLRIT----VPNMTCHGIDFMRDGKSIISAWNDGKIRAFAPETGRLMYVINNA 415
Query: 82 ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFD--ADPFVLLTSVKVHKKGVNDLAVH 139
VT++A S + + S +G V ++ L ++K HK V+ + V
Sbjct: 416 HRIGVTAIA-----TTSDCKRVISGGGEGEVRVWQIGCQTQKLEEALKEHKSSVSCIRVK 470
Query: 140 HSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT---EEKVGI 196
+ + +T D + +LVR RR+ + + E+F ++T + K+
Sbjct: 471 RNNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVCY--HPEEFQIITSGTDRKIAY 528
Query: 197 HQAEDAKLLCELDGK--KRILCAAPGENGVLF-TGGEDRSITAWDTNSGKVAYCIEDAHS 253
+ D ++ EL+G I + GV F TGG D + WD N G+V + + HS
Sbjct: 529 WEVFDGTVIRELEGSLSGSINGMDITQEGVHFVTGGNDHLVKVWDYNEGEVTH-VGVGHS 587
Query: 254 ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289
+ I + + N Y+V S S+DG I W
Sbjct: 588 GNITRIRI--------SPGNQYIV-SVSADGAILRW 614
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 101 RNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAM-VNL 159
+ L S S D + I++ P + HK + + SG L + RD + + V
Sbjct: 31 KQLASGSMDSCLMIWNMKPQMRAYRFVGHKDAILSVDFSPSGHLIASASRDKTVRLWVPS 90
Query: 160 VRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEK-VGIHQAEDAKLLCELDGK-KRILCA 217
V+G + + + F G G+ +++K + + K L L+ + CA
Sbjct: 91 VKGESTVFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCA 150
Query: 218 APGENGVLF-TGGEDRSITAWDTNSGKVAYCIEDAHS-ARVKGIVVLTKNDGGSTAENPY 275
+G L + +D++I WD S + CI HS G V T
Sbjct: 151 KFSPDGRLIVSASDDKTIKLWDKTSRE---CI---HSFCEHGGFVNFVDFHPSGTC---- 200
Query: 276 LVASASSDGVICVWDVRM 293
+A+A++D + VWD+RM
Sbjct: 201 -IAAAATDNTVKVWDIRM 217
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 15/172 (8%)
Query: 24 SSDQKTLTLTQ------LFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSL 75
+SD KT+ + LFS H++ + S G S D TI L+D ++ +
Sbjct: 120 ASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSRECI 179
Query: 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVND 135
+ H + + P + + + D V ++D L+ +VH VN
Sbjct: 180 HSFCEH--GGFVNFVDFHPSGTCIA----AAATDNTVKVWDIRMNKLIQHYQVHSGVVNS 233
Query: 136 LAVHHSGKLALTVGRDDCLAMVNLVRGRRSF-YHKIGKEASLIKFDGSGEKF 186
L+ H SG +T D L +++L+ GR + H + +KF GE F
Sbjct: 234 LSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTSVKFSREGEFF 285
>sp|Q09990|LIN23_CAEEL F-box/WD repeat-containing protein lin-23 OS=Caenorhabditis elegans
GN=lin-23 PE=1 SV=2
Length = 665
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 33/252 (13%)
Query: 56 ASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIF 115
SG D+TI ++D S + H + SV L + R + S S+D V ++
Sbjct: 236 VSGLRDNTIKIWDRKDYSCSRILSGH-TGSVLCLQYDN-------RVIISGSSDATVRVW 287
Query: 116 DADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI--GKE 173
D + + ++ H + V L + + + +T +D +A+ ++V R ++ G
Sbjct: 288 DVETGECIKTLIHHCEAV--LHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHR 345
Query: 174 A--SLIKFDGSGEKFFMVT---EEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTG 228
A +++ FD ++V+ + + + + + + L G +R + ++ +G
Sbjct: 346 AAVNVVDFDDR----YIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSG 401
Query: 229 GEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICV 288
D +I WD +SG V + + H V+ I K + S + DG I V
Sbjct: 402 SSDNTIRLWDIHSG-VCLRVLEGHEELVRCIRFDEKR-----------IVSGAYDGKIKV 449
Query: 289 WDVRMAIKEKPL 300
WD++ A+ + L
Sbjct: 450 WDLQAALDPRAL 461
>sp|Q5R9T6|WDR55_PONAB WD repeat-containing protein 55 OS=Pongo abelii GN=WDR55 PE=2 SV=1
Length = 383
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 34 QLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAF 91
+L+S HL VA S G + D IH+ D+ I + + SL
Sbjct: 76 ELWSSGHHLKACRAVAFSEDGQKLVTVSKDKAIHVLDVEQGRLERRISKAHGAPINSL-- 133
Query: 92 YTPQNLSVPRNLFSTSAD-GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR 150
L V N+ +T D G + ++D L ++ H++ + D+A+ + KL LT
Sbjct: 134 -----LLVDENVLATGDDMGGIRLWDQRKEGPLMDMRQHEEYIADMALDPAKKLLLTASG 188
Query: 151 DDCLAMVNLVRGR 163
D CL + N+ R R
Sbjct: 189 DGCLGVFNIKRRR 201
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 15/172 (8%)
Query: 24 SSDQKTLTLTQ------LFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSL 75
+SD KT+ + LFS H++ + S G S D TI L+D ++ +
Sbjct: 120 ASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSRECI 179
Query: 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVND 135
+ H + + P + + + D V ++D L+ +VH VN
Sbjct: 180 QSFCEH--GGFVNFVDFHPSGTCIA----AAATDNTVKVWDIRMNKLIQHYQVHSGVVNS 233
Query: 136 LAVHHSGKLALTVGRDDCLAMVNLVRGRRSF-YHKIGKEASLIKFDGSGEKF 186
L+ H SG +T D L +++L+ GR + H + +KF G+ F
Sbjct: 234 LSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFSREGDFF 285
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 14/169 (8%)
Query: 129 HKKGVNDLAVHHSGKLALTVGRDDCLAM-VNLVRGRRSFYHKIGKEASLIKFDGSGEKFF 187
HK + + SG L + RD + + V V+G + + + F G G+
Sbjct: 59 HKDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLV 118
Query: 188 MVTEEK-VGIHQAEDAKLLCELDGK-KRILCAAPGENGVLF-TGGEDRSITAWDTNSGKV 244
+++K + + K L L+ + CA +G L + +D++I WD S +
Sbjct: 119 TASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSRE- 177
Query: 245 AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293
CI+ G V T +A+A++D + VWD+RM
Sbjct: 178 --CIQSF--CEHGGFVNFVDFHPSGTC-----IAAAATDNTVKVWDIRM 217
>sp|Q75BY3|PRP46_ASHGO Pre-mRNA-splicing factor PRP46 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PRP46
PE=3 SV=2
Length = 425
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 210 GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGS 269
G R +C P +N TG D +I WD +GK+ ++ H V+ I +
Sbjct: 114 GWVRCVCVDPVDNAWFATGSNDSTIRVWDLATGKLKVTLQ-GHIMTVRDICI-------- 164
Query: 270 TAENPYLVASASSDGVICVWDV 291
+A +PY+ SAS D ++ WD+
Sbjct: 165 SARHPYMF-SASQDKLVKCWDL 185
>sp|Q9QXL1|KI21B_MOUSE Kinesin-like protein KIF21B OS=Mus musculus GN=Kif21b PE=1 SV=2
Length = 1668
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 7/124 (5%)
Query: 39 PAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLS 98
P H I +A+ G SG D+ I +DL + I + V +LAF + +
Sbjct: 1503 PPHYDGIECLAIQGDILFSGSRDNGIKKWDLDQQELIQQIPNAHKDWVCALAFVPGRPM- 1561
Query: 99 VPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158
L S GF+ +++ D F + +K H +N A+ + K T D + + N
Sbjct: 1562 ----LLSACRAGFIKVWNVDNFTPIGEIKGHDSPIN--AICTNSKHIFTASSDCRVKLWN 1615
Query: 159 LVRG 162
V G
Sbjct: 1616 YVPG 1619
>sp|A2CEH0|POC1B_DANRE POC1 centriolar protein homolog B OS=Danio rerio GN=poc1b PE=2 SV=1
Length = 490
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 26/215 (12%)
Query: 86 VTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLA 145
V S A + P N + L + S D + I++ P H + + SG L
Sbjct: 20 VISCADFNPNN----KQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLV 75
Query: 146 LTVGRDDCLAM-VNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEK-VGIHQAEDAK 203
+ RD + + ++G + + + F G++ +++K V + E K
Sbjct: 76 ASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKK 135
Query: 204 LLCELDGKKR-ILCAAPGENGVLFTG-GEDRSITAWDTNSGKVAYCIEDAHSARVKGIVV 261
L L+ + CA +G L G+DR++ WDT+S + CI +
Sbjct: 136 FLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQ---CIN-----------I 181
Query: 262 LTKNDGGST----AENPYLVASASSDGVICVWDVR 292
T G +T + +AS+ +D I +WD+R
Sbjct: 182 FTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIR 216
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 84/227 (37%), Gaps = 51/227 (22%)
Query: 35 LFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFY 92
L+S H + + S G AS G D T+ L+D S+ + I S T + F
Sbjct: 137 LYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCIN-IFTDYGGSATFVDFN 195
Query: 93 TPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD 152
+ + S+ AD + I+D L+ KVH GVN + H SG ++ D
Sbjct: 196 SSGTC-----IASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDS 250
Query: 153 CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKK 212
+ +++L+ GR L+ L G K
Sbjct: 251 TIKILDLLEGR----------------------------------------LIYTLHGHK 270
Query: 213 -RILCAAPGENGVLF-TGGEDRSITAWDTNSGKVAYC-IEDAHSARV 256
+L +G LF +GG D + W TN + Y + HS RV
Sbjct: 271 GPVLTVTFSRDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHSKRV 317
Score = 32.0 bits (71), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 109/302 (36%), Gaps = 52/302 (17%)
Query: 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTV--AVSGTAAASGGT 60
L GS +K + + L P + F + H IT V A SG+ AS
Sbjct: 33 LATGSCDKSLMIWNLAPK------------ARAFRFVGHTDVITGVNFAPSGSLVASSSR 80
Query: 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120
D T+ L+ S H ++SV S+ F + L + S D V ++ +
Sbjct: 81 DQTVRLWTPSIKGESTVFKAH-TASVRSVHFSRDG-----QRLVTASDDKSVKVWGVERK 134
Query: 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR-RSFYHKIGKEASLIKF 179
L S+ H V G+L + G D + + + + + + G A+ + F
Sbjct: 135 KFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDF 194
Query: 180 DGSGE-----------KFFMVTEEKVGIH-QAEDAKLLCELDGKKRILCAAPGENGVLFT 227
+ SG K + + K+ H + +A + C P N L +
Sbjct: 195 NSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNC--------FSFHPSGN-YLIS 245
Query: 228 GGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVIC 287
G D +I D G++ Y + H + + V DG L AS +D +
Sbjct: 246 GSSDSTIKILDLLEGRLIYTL---HGHKGPVLTVTFSRDGD-------LFASGGADSQVL 295
Query: 288 VW 289
+W
Sbjct: 296 MW 297
>sp|Q9H6Y2|WDR55_HUMAN WD repeat-containing protein 55 OS=Homo sapiens GN=WDR55 PE=1 SV=2
Length = 383
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 34 QLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAF 91
+L+S HL VA S G + D IH+ D+ + + + SL
Sbjct: 76 ELWSSGHHLKACRAVAFSEDGQKLITVSKDKAIHVLDVEQGQLERRVSKAHGAPINSL-- 133
Query: 92 YTPQNLSVPRNLFSTSAD-GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR 150
L V N+ +T D G + ++D L ++ H++ + D+A+ + KL LT
Sbjct: 134 -----LLVDENVLATGDDTGGICLWDQRKEGPLMDMRQHEEYIADMALDPAKKLLLTASG 188
Query: 151 DDCLAMVNLVRGR 163
D CL + N+ R R
Sbjct: 189 DGCLGIFNIKRRR 201
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 13/76 (17%)
Query: 225 LFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG 284
L T +D++I D G++ + AH A + ++++ +N ++A+ G
Sbjct: 99 LITVSKDKAIHVLDVEQGQLERRVSKAHGAPINSLLLVDEN----------VLATGDDTG 148
Query: 285 VICVWDVRMAIKEKPL 300
IC+WD R KE PL
Sbjct: 149 GICLWDQR---KEGPL 161
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 76/197 (38%), Gaps = 14/197 (7%)
Query: 101 RNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160
+ + + S D F+ ++ P HK V L G L + RD + + L
Sbjct: 31 KQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLD 90
Query: 161 R-GRRSFYHKIGKEASLIKFDGSGEKFFMVTEEK-VGIHQAEDAKLLCELDGKKR-ILCA 217
R G+ S + + F G+ +E+K + + + L L + CA
Sbjct: 91 RKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCA 150
Query: 218 APGENGVLFTG-GEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYL 276
+G L ED++I WDT + + D+ V + N G+
Sbjct: 151 KFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS----VGFANFVDFNPNGTC------ 200
Query: 277 VASASSDGVICVWDVRM 293
+ASA SD + +WD+RM
Sbjct: 201 IASAGSDHAVKIWDIRM 217
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF 111
G S D TI ++D + + + +S + + P + S +D
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVN--NFSDSVGFANFVDFNPNGTCIA----SAGSDHA 209
Query: 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR 163
V I+D LL +VH GVN L+ H G +T D + M++L+ GR
Sbjct: 210 VKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGR 261
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 18/169 (10%)
Query: 51 SGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG 110
+GT AS G+D + ++D+ + L H S V L+F+ N +L + S+DG
Sbjct: 197 NGTCIASAGSDHAVKIWDIRMNKLLQHYQVH-SCGVNCLSFHPLGN-----SLVTASSDG 250
Query: 111 FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI 170
V + D L+ +++ H V ++ G+L LT G D ++ R +F H
Sbjct: 251 TVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGEL-LTSGGADAQVLI----WRTNFIHLH 305
Query: 171 GKEA----SLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRIL 215
K+ + F+ S + H ED K E++ K+ ++
Sbjct: 306 CKDPKRNLKRLHFEASPHLLDIYPRSP---HSHEDRKETIEINPKREVM 351
>sp|O45487|EMAL_CAEEL Echinoderm microtubule-associated protein-like elp-1
OS=Caenorhabditis elegans GN=elp-1 PE=2 SV=1
Length = 891
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 35/244 (14%)
Query: 93 TPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD 152
+P++L R L + V I+D L + +KG+ +A + +L DD
Sbjct: 371 SPEDLV--RQLEMEHTEAHVRIWDTIKLTTLMVLNGFEKGICHVAFSKTDSGSLLAVVDD 428
Query: 153 CL----AMVNLVRGRRSFYHKIGKEA-----------SLIKFDGSGEKFFMVTEEKVGIH 197
L ++ N +G+R K + +LI G G F + G+
Sbjct: 429 SLKHLMSVWNWQKGKREGEVKASNDVVFECKWHPTIRNLIVLYGKGHFSFFNYDPATGVL 488
Query: 198 QAEDAKLLCELDGK---KRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSA 254
K + +G+ K +L GEN + TG + +I+ WD + K + AHS
Sbjct: 489 ----VKTVATFEGRDKPKTVLSMCFGENDQVVTGDSNGTISIWDPRTCKTT---KQAHSV 541
Query: 255 RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK-EKPLPLAEAKTNSRLTC 313
G+ LT G + S D ++ WD++ ++ +P+ L + K R+
Sbjct: 542 HPGGVYSLTLAKSGK-------ILSGGKDRMVSEWDLQDLVRTRRPIELPDEKGFPRVIL 594
Query: 314 LAGS 317
GS
Sbjct: 595 QNGS 598
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 99/224 (44%), Gaps = 12/224 (5%)
Query: 32 LTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAF 91
L ++ ++ +++S + +G A+GG D ++++ ++ + + ++ H ++ + SL
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGH-TTPIESLQI 71
Query: 92 YTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD 151
+ L V + S G + ++D + +L ++ HK + L H G + D
Sbjct: 72 SAKEELIV-----AGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLD 126
Query: 152 DCLAMVNLVRGRRSFYHKIGKEA-SLIKFDGSGEKFFMVTEE-KVGIHQAEDAKLLCELD 209
+ + ++ R F +K +A ++F G+ ++ V + K++ E
Sbjct: 127 TDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFT 186
Query: 210 GKK---RILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIED 250
G ++ P E +L +G DR+I WD V CIE+
Sbjct: 187 GHSGPVNVVEFHPSEY-LLASGSSDRTIRFWDLEKFHVVSCIEE 229
>sp|Q08E38|PRP19_BOVIN Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1
Length = 504
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 28/212 (13%)
Query: 103 LFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAM------ 156
+ + AD V +FD +L ++K H K V + H S +L + D + +
Sbjct: 237 ILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNA 296
Query: 157 --VNLVRGRRSFYHKIGKEAS-LIKFDGSGEKFFMVTEEKVG--IHQAEDAKLLCELDGK 211
V +VR S + A+ S ++++ ++ + G + + D C L
Sbjct: 297 SCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLT-- 354
Query: 212 KRILCAAPGENGVLF-TGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGST 270
CA +G++F TG D I WD + HS + I
Sbjct: 355 ----CAQFHPDGLIFGTGTMDSQIKIWDLKE-RTNVANFPGHSGPITSIAF--------- 400
Query: 271 AENPYLVASASSDGVICVWDVRMAIKEKPLPL 302
+EN Y +A+A+ D + +WD+R K L L
Sbjct: 401 SENGYYLATAADDSSVKLWDLRKLKNFKTLQL 432
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 18/101 (17%)
Query: 194 VGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHS 253
VG+H A +L LD LC P + + TGG D+++ +D +S ++ ++ H+
Sbjct: 214 VGLHSASIPGILA-LD-----LC--PSDTNKILTGGADKNVVVFDKSSEQILATLK-GHT 264
Query: 254 ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294
+V +V + LV SAS D I +W V A
Sbjct: 265 KKVTSVVFHPSQE---------LVFSASPDATIRIWSVPNA 296
Score = 31.6 bits (70), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 33 TQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLA 90
T + ++P H PIT++A S G A+ D ++ L+DL + + + V SL
Sbjct: 383 TNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLI 442
Query: 91 F 91
F
Sbjct: 443 F 443
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,931,962
Number of Sequences: 539616
Number of extensions: 5234027
Number of successful extensions: 18535
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 593
Number of HSP's that attempted gapping in prelim test: 16512
Number of HSP's gapped (non-prelim): 2347
length of query: 343
length of database: 191,569,459
effective HSP length: 118
effective length of query: 225
effective length of database: 127,894,771
effective search space: 28776323475
effective search space used: 28776323475
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)