Query 019326
Match_columns 343
No_of_seqs 650 out of 1868
Neff 11.6
Searched_HMMs 46136
Date Fri Mar 29 08:33:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019326.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019326hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271 Notchless-like WD40 re 100.0 6.1E-50 1.3E-54 311.4 25.0 305 2-334 129-477 (480)
2 KOG0294 WD40 repeat-containing 100.0 1.2E-47 2.7E-52 291.5 30.2 318 1-330 2-319 (362)
3 KOG0272 U4/U6 small nuclear ri 100.0 4.9E-48 1.1E-52 304.2 20.9 262 1-290 188-458 (459)
4 KOG0272 U4/U6 small nuclear ri 100.0 3.6E-46 7.8E-51 293.7 21.9 279 40-335 173-457 (459)
5 KOG0271 Notchless-like WD40 re 100.0 9.9E-46 2.2E-50 288.0 22.7 285 33-339 106-440 (480)
6 KOG0279 G protein beta subunit 100.0 7.2E-44 1.6E-48 266.6 29.5 289 32-338 5-313 (315)
7 KOG0286 G-protein beta subunit 100.0 3E-42 6.4E-47 259.7 29.9 260 2-290 69-343 (343)
8 KOG0279 G protein beta subunit 100.0 2.4E-42 5.2E-47 258.5 29.2 268 3-293 31-314 (315)
9 KOG0315 G-protein beta subunit 100.0 8.7E-41 1.9E-45 246.3 29.3 266 2-297 12-293 (311)
10 KOG0286 G-protein beta subunit 100.0 1.1E-39 2.4E-44 245.8 31.2 287 29-335 42-342 (343)
11 KOG0285 Pleiotropic regulator 100.0 8.6E-41 1.9E-45 258.5 25.7 291 31-338 140-439 (460)
12 KOG0284 Polyadenylation factor 100.0 9E-42 1.9E-46 267.9 18.3 266 2-294 110-382 (464)
13 KOG0285 Pleiotropic regulator 100.0 1.3E-39 2.8E-44 252.0 24.8 265 3-294 166-441 (460)
14 KOG0295 WD40 repeat-containing 100.0 5.8E-40 1.3E-44 254.2 22.5 284 34-337 100-405 (406)
15 KOG0315 G-protein beta subunit 100.0 9.8E-39 2.1E-43 235.5 26.5 268 53-340 11-290 (311)
16 KOG0291 WD40-repeat-containing 100.0 3.5E-38 7.5E-43 265.4 32.7 307 3-338 280-612 (893)
17 KOG0295 WD40 repeat-containing 100.0 1.7E-39 3.7E-44 251.6 22.5 261 3-291 123-405 (406)
18 KOG0296 Angio-associated migra 100.0 1.4E-38 3E-43 246.7 26.7 302 3-338 79-398 (399)
19 KOG0318 WD40 repeat stress pro 100.0 8.5E-38 1.9E-42 253.0 32.2 302 1-333 161-597 (603)
20 KOG0273 Beta-transducin family 100.0 2.4E-38 5.3E-43 252.9 27.2 308 3-335 194-520 (524)
21 KOG0281 Beta-TrCP (transducin 100.0 4.8E-40 1E-44 253.7 14.0 256 2-294 209-479 (499)
22 KOG0263 Transcription initiati 100.0 6.7E-38 1.4E-42 265.2 26.9 248 32-295 368-652 (707)
23 KOG0273 Beta-transducin family 100.0 2.2E-37 4.8E-42 247.4 28.1 260 2-292 249-523 (524)
24 KOG0316 Conserved WD40 repeat- 100.0 1.2E-37 2.7E-42 228.0 24.1 284 31-336 6-298 (307)
25 KOG0282 mRNA splicing factor [ 100.0 1E-38 2.2E-43 255.8 19.1 263 2-290 229-503 (503)
26 PLN00181 protein SPA1-RELATED; 100.0 1.4E-36 3.1E-41 280.8 35.7 283 38-336 479-791 (793)
27 KOG0284 Polyadenylation factor 100.0 1.5E-38 3.3E-43 249.8 17.3 275 41-334 95-376 (464)
28 cd00200 WD40 WD40 domain, foun 100.0 5.1E-36 1.1E-40 246.6 33.1 280 36-335 3-288 (289)
29 KOG0266 WD40 repeat-containing 100.0 8.5E-37 1.9E-41 263.6 29.5 265 2-292 173-454 (456)
30 KOG0291 WD40-repeat-containing 100.0 1.6E-35 3.5E-40 249.4 33.7 319 1-339 202-551 (893)
31 KOG0319 WD40-repeat-containing 100.0 8.2E-37 1.8E-41 256.5 25.8 304 2-338 295-619 (775)
32 KOG0263 Transcription initiati 100.0 6.5E-37 1.4E-41 259.2 25.2 234 3-242 393-651 (707)
33 KOG0645 WD40 repeat protein [G 100.0 1.7E-35 3.7E-40 221.0 29.6 284 32-336 4-309 (312)
34 KOG0281 Beta-TrCP (transducin 100.0 2.9E-38 6.3E-43 243.9 15.2 271 41-336 196-485 (499)
35 KOG0265 U5 snRNP-specific prot 100.0 3.2E-36 6.9E-41 228.0 25.3 262 2-290 61-336 (338)
36 KOG0313 Microtubule binding pr 100.0 3.7E-36 8E-41 234.4 25.5 260 3-293 118-419 (423)
37 KOG0645 WD40 repeat protein [G 100.0 2E-35 4.3E-40 220.7 28.2 265 2-292 29-311 (312)
38 cd00200 WD40 WD40 domain, foun 100.0 6.2E-35 1.4E-39 240.1 34.5 261 2-290 23-289 (289)
39 KOG0293 WD40 repeat-containing 100.0 1E-36 2.2E-41 240.0 22.4 269 2-294 238-515 (519)
40 KOG0265 U5 snRNP-specific prot 100.0 3.1E-36 6.7E-41 228.0 23.9 284 32-335 37-335 (338)
41 KOG0278 Serine/threonine kinas 100.0 2.5E-37 5.5E-42 228.3 16.1 266 2-295 31-300 (334)
42 KOG0319 WD40-repeat-containing 100.0 4.3E-36 9.3E-41 252.2 23.8 264 2-293 338-620 (775)
43 KOG0276 Vesicle coat complex C 100.0 5.1E-36 1.1E-40 247.6 23.5 276 36-331 7-292 (794)
44 KOG0318 WD40 repeat stress pro 100.0 1.8E-34 4E-39 233.8 32.0 300 2-330 73-385 (603)
45 KOG0306 WD40-repeat-containing 100.0 5.9E-35 1.3E-39 245.9 29.9 308 7-339 341-665 (888)
46 KOG0266 WD40 repeat-containing 100.0 8.9E-35 1.9E-39 251.1 32.0 286 35-336 151-452 (456)
47 KOG1407 WD40 repeat protein [F 100.0 4E-35 8.7E-40 217.9 23.3 276 36-332 14-296 (313)
48 KOG0306 WD40-repeat-containing 100.0 1.1E-34 2.3E-39 244.4 27.7 306 2-338 79-538 (888)
49 KOG0316 Conserved WD40 repeat- 100.0 7.2E-35 1.6E-39 213.6 22.6 258 3-292 32-299 (307)
50 KOG0274 Cdc4 and related F-box 100.0 1.2E-33 2.6E-38 243.5 29.8 261 2-298 220-488 (537)
51 KOG0276 Vesicle coat complex C 100.0 3.2E-34 6.9E-39 237.0 24.8 256 3-286 28-293 (794)
52 PLN00181 protein SPA1-RELATED; 100.0 9.3E-33 2E-37 255.6 37.0 268 2-291 497-792 (793)
53 KOG0313 Microtubule binding pr 100.0 6.8E-34 1.5E-38 221.8 24.4 279 40-337 103-417 (423)
54 KOG0283 WD40 repeat-containing 100.0 3.4E-34 7.3E-39 244.7 24.7 244 34-294 258-578 (712)
55 KOG0275 Conserved WD40 repeat- 100.0 2.7E-35 5.9E-40 225.8 15.7 268 2-290 227-507 (508)
56 KOG0292 Vesicle coat complex C 100.0 1.1E-33 2.3E-38 242.4 26.7 261 3-292 24-321 (1202)
57 KOG0282 mRNA splicing factor [ 100.0 6.9E-35 1.5E-39 233.9 16.2 284 31-335 203-502 (503)
58 KOG0293 WD40 repeat-containing 100.0 1E-33 2.2E-38 223.2 21.9 290 29-337 211-512 (519)
59 KOG0299 U3 snoRNP-associated p 100.0 2.9E-33 6.3E-38 223.4 24.7 281 35-331 135-448 (479)
60 KOG0278 Serine/threonine kinas 100.0 2.2E-34 4.7E-39 212.9 14.6 281 36-337 8-296 (334)
61 KOG0310 Conserved WD40 repeat- 100.0 7.3E-33 1.6E-37 222.6 24.4 258 10-295 48-312 (487)
62 KOG0643 Translation initiation 100.0 3.4E-32 7.4E-37 203.1 26.0 241 37-293 5-318 (327)
63 KOG0288 WD40 repeat protein Ti 100.0 2.9E-34 6.2E-39 226.1 14.7 282 32-333 165-456 (459)
64 KOG1446 Histone H3 (Lys4) meth 100.0 2.7E-31 5.9E-36 203.0 30.5 277 32-328 4-295 (311)
65 KOG0296 Angio-associated migra 100.0 3.2E-32 7E-37 211.5 25.7 263 2-292 120-398 (399)
66 KOG0292 Vesicle coat complex C 100.0 8E-33 1.7E-37 237.2 23.6 271 39-330 6-314 (1202)
67 KOG0288 WD40 repeat protein Ti 100.0 8.9E-34 1.9E-38 223.4 15.5 261 2-290 189-459 (459)
68 KOG0647 mRNA export protein (c 100.0 6.6E-32 1.4E-36 204.9 25.0 266 40-328 25-313 (347)
69 KOG0274 Cdc4 and related F-box 100.0 3.4E-32 7.4E-37 234.5 26.2 270 41-337 207-481 (537)
70 PTZ00420 coronin; Provisional 100.0 6.2E-31 1.3E-35 227.6 34.1 249 58-322 50-320 (568)
71 KOG0268 Sof1-like rRNA process 100.0 4E-33 8.6E-38 216.4 17.4 263 3-296 82-349 (433)
72 KOG0973 Histone transcription 100.0 5E-32 1.1E-36 237.3 26.1 284 2-300 27-363 (942)
73 KOG0268 Sof1-like rRNA process 100.0 1.5E-33 3.3E-38 218.7 14.7 282 35-341 59-348 (433)
74 KOG0305 Anaphase promoting com 100.0 1.2E-31 2.5E-36 223.3 26.3 263 3-294 190-463 (484)
75 KOG1539 WD repeat protein [Gen 100.0 4.2E-30 9.2E-35 219.2 33.3 297 2-330 174-639 (910)
76 PTZ00421 coronin; Provisional 100.0 3.4E-30 7.5E-35 221.9 33.4 224 37-265 70-315 (493)
77 KOG0277 Peroxisomal targeting 100.0 1.6E-31 3.4E-36 198.1 21.4 259 9-291 37-308 (311)
78 PTZ00420 coronin; Provisional 100.0 1.9E-30 4E-35 224.6 31.6 243 5-266 49-319 (568)
79 KOG1407 WD40 repeat protein [F 100.0 1.6E-30 3.4E-35 193.6 25.6 253 2-283 34-293 (313)
80 KOG0643 Translation initiation 100.0 8.1E-31 1.8E-35 195.8 23.8 236 77-332 5-255 (327)
81 KOG0310 Conserved WD40 repeat- 100.0 5E-31 1.1E-35 212.1 23.7 270 41-332 25-303 (487)
82 KOG0275 Conserved WD40 repeat- 100.0 1.5E-31 3.3E-36 205.2 17.0 277 40-336 211-507 (508)
83 KOG1446 Histone H3 (Lys4) meth 100.0 4.1E-29 8.9E-34 191.1 30.1 261 2-293 28-304 (311)
84 PTZ00421 coronin; Provisional 100.0 2.7E-29 5.8E-34 216.4 32.3 252 49-318 29-313 (493)
85 KOG0640 mRNA cleavage stimulat 100.0 4.9E-31 1.1E-35 201.1 18.3 276 1-292 125-426 (430)
86 KOG0289 mRNA splicing factor [ 100.0 7.6E-30 1.6E-34 202.6 24.4 275 43-334 220-502 (506)
87 KOG0289 mRNA splicing factor [ 100.0 6.7E-30 1.5E-34 202.9 24.1 262 2-291 233-505 (506)
88 KOG1036 Mitotic spindle checkp 100.0 3E-29 6.6E-34 191.0 26.4 265 41-330 12-296 (323)
89 KOG0308 Conserved WD40 repeat- 100.0 2.5E-30 5.4E-35 215.0 18.0 269 3-294 40-329 (735)
90 KOG0277 Peroxisomal targeting 100.0 2.9E-30 6.3E-35 191.5 16.3 222 2-239 75-308 (311)
91 KOG0301 Phospholipase A2-activ 100.0 3.7E-29 8E-34 209.4 24.8 258 2-294 27-290 (745)
92 KOG0305 Anaphase promoting com 100.0 3.9E-29 8.5E-34 208.3 24.7 269 48-339 183-462 (484)
93 KOG0300 WD40 repeat-containing 100.0 3E-29 6.5E-34 192.1 21.5 274 30-320 136-456 (481)
94 KOG0772 Uncharacterized conser 100.0 1.7E-29 3.7E-34 204.8 21.3 270 2-293 181-489 (641)
95 KOG0640 mRNA cleavage stimulat 100.0 4.3E-29 9.3E-34 190.6 21.5 281 36-335 106-423 (430)
96 KOG0283 WD40 repeat-containing 100.0 2.8E-29 6E-34 214.8 22.4 204 31-241 358-577 (712)
97 KOG1036 Mitotic spindle checkp 100.0 1.7E-28 3.6E-33 187.0 24.1 248 2-282 27-294 (323)
98 TIGR03866 PQQ_ABC_repeats PQQ- 100.0 5.6E-27 1.2E-31 194.6 35.4 279 3-318 4-300 (300)
99 KOG0264 Nucleosome remodeling 100.0 8E-29 1.7E-33 197.9 21.7 238 2-294 139-406 (422)
100 KOG0300 WD40 repeat-containing 100.0 5.2E-29 1.1E-33 190.9 19.7 266 3-294 163-478 (481)
101 KOG1408 WD40 repeat protein [F 100.0 7.2E-29 1.6E-33 208.7 21.7 277 3-293 395-714 (1080)
102 KOG0973 Histone transcription 100.0 2.2E-28 4.8E-33 214.6 25.1 285 41-335 12-352 (942)
103 KOG0772 Uncharacterized conser 100.0 6.7E-29 1.5E-33 201.4 19.9 292 30-339 155-488 (641)
104 KOG0641 WD40 repeat protein [G 100.0 1.2E-26 2.6E-31 169.8 29.4 277 3-292 47-349 (350)
105 KOG0294 WD40 repeat-containing 100.0 3.5E-28 7.5E-33 185.8 22.0 221 2-242 55-283 (362)
106 KOG0639 Transducin-like enhanc 100.0 4.5E-29 9.8E-34 201.9 18.2 264 3-291 434-703 (705)
107 KOG0308 Conserved WD40 repeat- 100.0 2.7E-29 5.8E-34 208.9 17.2 238 41-294 20-287 (735)
108 KOG0647 mRNA export protein (c 100.0 6.3E-28 1.4E-32 183.4 22.9 245 3-266 43-306 (347)
109 KOG0299 U3 snoRNP-associated p 100.0 6E-28 1.3E-32 193.2 23.3 273 2-292 156-456 (479)
110 KOG2048 WD40 repeat protein [G 100.0 1.4E-26 3E-31 193.7 31.2 275 38-330 21-311 (691)
111 KOG2055 WD40 repeat protein [G 100.0 2.3E-27 4.9E-32 190.0 22.7 282 42-339 213-513 (514)
112 KOG1332 Vesicle coat complex C 100.0 1.4E-27 3.1E-32 176.2 19.5 232 2-293 25-287 (299)
113 KOG0646 WD40 repeat protein [G 100.0 1.1E-27 2.4E-32 192.0 20.4 238 41-293 80-351 (476)
114 KOG0639 Transducin-like enhanc 100.0 4.7E-28 1E-32 196.0 18.3 281 34-337 412-703 (705)
115 KOG0301 Phospholipase A2-activ 100.0 2.4E-27 5.3E-32 198.6 22.7 276 32-335 4-285 (745)
116 KOG2106 Uncharacterized conser 100.0 1.6E-25 3.5E-30 181.5 31.5 297 3-332 215-515 (626)
117 KOG0269 WD40 repeat-containing 100.0 2.9E-28 6.3E-33 206.5 16.4 231 3-294 103-342 (839)
118 KOG0646 WD40 repeat protein [G 100.0 1.2E-26 2.6E-31 186.1 24.7 275 10-316 18-327 (476)
119 KOG0321 WD40 repeat-containing 100.0 4.5E-27 9.7E-32 195.3 21.3 275 2-295 66-394 (720)
120 KOG1332 Vesicle coat complex C 100.0 1.2E-27 2.6E-32 176.7 16.0 262 39-337 8-285 (299)
121 KOG0641 WD40 repeat protein [G 100.0 1.8E-24 3.9E-29 158.5 31.4 285 31-332 22-343 (350)
122 KOG1539 WD repeat protein [Gen 100.0 4E-25 8.7E-30 189.1 32.4 317 2-340 126-608 (910)
123 TIGR03866 PQQ_ABC_repeats PQQ- 100.0 2.6E-25 5.6E-30 184.6 30.8 265 52-339 1-280 (300)
124 KOG2106 Uncharacterized conser 100.0 2E-25 4.3E-30 180.9 27.0 302 2-335 259-623 (626)
125 KOG2048 WD40 repeat protein [G 100.0 4.5E-25 9.8E-30 184.7 29.8 259 2-289 39-316 (691)
126 KOG4283 Transcription-coupled 100.0 9.2E-26 2E-30 171.3 22.6 274 3-291 59-364 (397)
127 KOG2445 Nuclear pore complex c 100.0 3.6E-25 7.8E-30 168.9 25.7 240 40-294 11-320 (361)
128 KOG0650 WD40 repeat nucleolar 100.0 5.6E-26 1.2E-30 187.6 22.7 297 23-335 381-732 (733)
129 KOG1408 WD40 repeat protein [F 100.0 1.1E-25 2.4E-30 189.7 24.4 307 2-336 338-711 (1080)
130 KOG0269 WD40 repeat-containing 100.0 8.9E-27 1.9E-31 197.6 17.9 262 2-330 53-331 (839)
131 KOG1274 WD40 repeat protein [G 99.9 4.8E-25 1E-29 190.5 25.3 243 2-266 27-283 (933)
132 KOG0267 Microtubule severing p 99.9 1.5E-27 3.3E-32 200.8 9.5 230 38-283 24-259 (825)
133 KOG0270 WD40 repeat-containing 99.9 9E-26 2E-30 180.1 19.0 229 52-295 192-452 (463)
134 KOG4378 Nuclear protein COP1 [ 99.9 2.3E-25 5E-30 180.3 21.0 286 3-320 5-305 (673)
135 KOG1274 WD40 repeat protein [G 99.9 2.3E-24 5E-29 186.3 28.4 259 40-323 11-285 (933)
136 KOG2096 WD40 repeat protein [G 99.9 1.1E-24 2.5E-29 167.1 21.9 239 35-290 79-400 (420)
137 KOG1063 RNA polymerase II elon 99.9 3.2E-24 7E-29 180.1 25.6 323 2-340 208-650 (764)
138 KOG2055 WD40 repeat protein [G 99.9 1.5E-24 3.2E-29 174.0 22.6 266 2-292 227-512 (514)
139 KOG1188 WD40 repeat protein [G 99.9 6.6E-25 1.4E-29 169.7 19.8 265 2-292 42-346 (376)
140 KOG0264 Nucleosome remodeling 99.9 7.9E-25 1.7E-29 175.2 20.4 229 80-322 122-387 (422)
141 KOG1273 WD40 repeat protein [G 99.9 2.9E-24 6.2E-29 164.6 22.0 263 2-294 37-324 (405)
142 KOG0649 WD40 repeat protein [G 99.9 6.1E-23 1.3E-27 152.0 26.5 268 3-289 25-313 (325)
143 KOG1034 Transcriptional repres 99.9 9.4E-25 2E-29 168.1 17.2 296 3-332 57-377 (385)
144 KOG1063 RNA polymerase II elon 99.9 8E-24 1.7E-28 177.7 23.2 306 2-337 161-601 (764)
145 KOG0270 WD40 repeat-containing 99.9 3.4E-24 7.3E-29 171.2 19.1 239 2-246 194-455 (463)
146 KOG1273 WD40 repeat protein [G 99.9 1.2E-23 2.7E-28 161.2 20.4 235 45-295 26-283 (405)
147 KOG1009 Chromatin assembly com 99.9 9E-23 1.9E-27 161.4 24.8 276 2-295 28-375 (434)
148 KOG0302 Ribosome Assembly prot 99.9 1.5E-23 3.3E-28 164.2 20.3 234 4-289 169-435 (440)
149 KOG0302 Ribosome Assembly prot 99.9 9.4E-24 2E-28 165.4 18.9 204 40-294 149-380 (440)
150 KOG0267 Microtubule severing p 99.9 2.3E-25 5E-30 187.8 10.5 211 3-231 43-259 (825)
151 KOG4283 Transcription-coupled 99.9 1.1E-23 2.5E-28 160.0 18.1 203 79-295 40-279 (397)
152 KOG4328 WD40 protein [Function 99.9 5E-23 1.1E-27 165.1 20.1 267 3-292 203-495 (498)
153 KOG0642 Cell-cycle nuclear pro 99.9 7.9E-24 1.7E-28 173.9 15.8 248 31-295 283-564 (577)
154 KOG0307 Vesicle coat complex C 99.9 2.6E-24 5.7E-29 190.2 11.9 235 3-295 83-330 (1049)
155 KOG4378 Nuclear protein COP1 [ 99.9 1.3E-22 2.8E-27 164.6 19.2 245 4-265 51-305 (673)
156 KOG0322 G-protein beta subunit 99.9 4.3E-23 9.2E-28 154.4 14.7 243 33-291 5-322 (323)
157 KOG0321 WD40 repeat-containing 99.9 3.3E-22 7.2E-27 166.7 20.9 263 40-319 45-371 (720)
158 KOG1963 WD40 repeat protein [G 99.9 3.9E-21 8.4E-26 166.0 27.0 304 3-330 30-531 (792)
159 KOG2445 Nuclear pore complex c 99.9 3.8E-21 8.2E-26 147.1 22.7 226 2-240 27-318 (361)
160 KOG0650 WD40 repeat nucleolar 99.9 1.1E-21 2.4E-26 162.6 21.2 256 3-289 415-732 (733)
161 KOG0290 Conserved WD40 repeat- 99.9 3.8E-21 8.1E-26 146.1 20.7 267 2-328 61-356 (364)
162 KOG0303 Actin-binding protein 99.9 4.1E-21 8.9E-26 151.6 20.0 201 38-244 77-298 (472)
163 KOG1445 Tumor-specific antigen 99.9 2.3E-21 5.1E-26 161.9 19.4 119 210-341 626-753 (1012)
164 KOG2919 Guanine nucleotide-bin 99.9 2.4E-20 5.2E-25 143.8 22.8 281 45-337 52-369 (406)
165 KOG4328 WD40 protein [Function 99.9 1.4E-20 3E-25 151.3 21.9 248 32-295 176-453 (498)
166 KOG2096 WD40 repeat protein [G 99.9 2.4E-20 5.2E-25 143.5 21.8 223 5-238 150-400 (420)
167 KOG1538 Uncharacterized conser 99.9 1.3E-20 2.8E-25 158.5 20.3 257 3-294 27-295 (1081)
168 KOG0644 Uncharacterized conser 99.9 2.2E-22 4.8E-27 172.6 10.0 269 34-330 182-460 (1113)
169 KOG1007 WD repeat protein TSSC 99.9 1.5E-20 3.2E-25 142.8 18.4 254 60-327 38-349 (370)
170 KOG4227 WD40 repeat protein [G 99.9 5.1E-20 1.1E-24 145.7 21.5 243 36-293 50-388 (609)
171 KOG2919 Guanine nucleotide-bin 99.9 5.7E-20 1.2E-24 141.7 21.1 272 2-293 63-368 (406)
172 KOG0642 Cell-cycle nuclear pro 99.9 4.2E-21 9E-26 158.1 14.4 240 2-253 308-573 (577)
173 COG2319 FOG: WD40 repeat [Gene 99.9 9.7E-18 2.1E-22 145.9 36.1 283 3-318 80-380 (466)
174 KOG1034 Transcriptional repres 99.9 5.5E-21 1.2E-25 147.5 13.4 235 2-292 107-383 (385)
175 COG2319 FOG: WD40 repeat [Gene 99.9 2E-17 4.2E-22 144.0 36.8 297 6-335 130-439 (466)
176 PRK11028 6-phosphogluconolacto 99.9 1.3E-17 2.8E-22 140.0 33.6 285 3-316 5-327 (330)
177 KOG0303 Actin-binding protein 99.9 3E-19 6.6E-24 141.2 21.4 204 76-294 75-296 (472)
178 KOG1009 Chromatin assembly com 99.8 4.9E-19 1.1E-23 140.4 20.6 278 42-330 13-364 (434)
179 KOG1587 Cytoplasmic dynein int 99.8 9.9E-19 2.1E-23 150.5 23.5 259 10-294 222-518 (555)
180 KOG1517 Guanine nucleotide bin 99.8 1.7E-18 3.7E-23 152.6 23.8 282 44-339 1066-1382(1387)
181 KOG1445 Tumor-specific antigen 99.8 1E-19 2.2E-24 152.3 15.5 226 6-244 599-848 (1012)
182 KOG1587 Cytoplasmic dynein int 99.8 1.2E-18 2.6E-23 150.0 22.4 258 61-337 221-515 (555)
183 KOG1272 WD40-repeat-containing 99.8 4.2E-20 9.1E-25 148.9 10.8 276 44-342 131-425 (545)
184 KOG1538 Uncharacterized conser 99.8 9.5E-19 2.1E-23 147.4 19.3 263 44-334 14-289 (1081)
185 KOG1240 Protein kinase contain 99.8 6.9E-18 1.5E-22 151.0 25.6 273 2-290 1063-1431(1431)
186 KOG0771 Prolactin regulatory e 99.8 4.1E-19 8.8E-24 141.7 15.5 192 87-293 148-355 (398)
187 KOG1524 WD40 repeat-containing 99.8 1.3E-18 2.7E-23 143.0 18.2 264 40-333 12-281 (737)
188 KOG2110 Uncharacterized conser 99.8 7.8E-18 1.7E-22 132.3 21.7 234 83-338 5-248 (391)
189 KOG1188 WD40 repeat protein [G 99.8 2.3E-18 4.9E-23 133.8 18.1 270 53-336 41-344 (376)
190 KOG0307 Vesicle coat complex C 99.8 1.3E-19 2.8E-24 160.9 12.4 247 59-321 36-309 (1049)
191 KOG0649 WD40 repeat protein [G 99.8 1E-17 2.2E-22 124.5 20.1 211 85-320 12-258 (325)
192 KOG1007 WD repeat protein TSSC 99.8 1.2E-17 2.6E-22 127.1 20.7 259 9-293 39-362 (370)
193 KOG2110 Uncharacterized conser 99.8 1.5E-16 3.2E-21 125.2 26.9 232 42-295 5-251 (391)
194 PRK11028 6-phosphogluconolacto 99.8 1.3E-16 2.8E-21 133.9 28.6 261 56-335 6-301 (330)
195 KOG0322 G-protein beta subunit 99.8 2.1E-18 4.5E-23 129.6 15.2 223 2-239 27-322 (323)
196 KOG3881 Uncharacterized conser 99.8 2.4E-17 5.2E-22 130.4 20.7 225 37-321 100-344 (412)
197 PF02239 Cytochrom_D1: Cytochr 99.8 3.7E-16 8.1E-21 131.0 29.3 293 3-328 9-335 (369)
198 KOG0644 Uncharacterized conser 99.8 9.3E-19 2E-23 150.7 10.9 255 2-294 204-470 (1113)
199 KOG1963 WD40 repeat protein [G 99.8 4.6E-16 9.9E-21 135.1 26.5 266 2-293 219-539 (792)
200 KOG2111 Uncharacterized conser 99.8 2E-16 4.3E-21 122.1 21.0 232 84-337 6-255 (346)
201 KOG1240 Protein kinase contain 99.8 2.5E-16 5.5E-21 141.2 24.1 252 29-295 1035-1337(1431)
202 PRK01742 tolB translocation pr 99.8 1.2E-16 2.6E-21 138.2 21.2 229 9-264 183-426 (429)
203 KOG1517 Guanine nucleotide bin 99.8 1.1E-16 2.4E-21 141.5 20.9 232 3-243 1126-1384(1387)
204 KOG1523 Actin-related protein 99.8 2.2E-16 4.8E-21 121.9 20.0 198 83-295 10-239 (361)
205 KOG2139 WD40 repeat protein [G 99.8 2.4E-15 5.1E-20 118.3 24.3 266 2-293 112-432 (445)
206 KOG2111 Uncharacterized conser 99.7 7.2E-15 1.6E-19 113.6 25.9 232 44-295 7-259 (346)
207 PRK01742 tolB translocation pr 99.7 5.9E-16 1.3E-20 133.9 22.1 232 61-319 183-426 (429)
208 KOG1272 WD40-repeat-containing 99.7 4E-18 8.8E-23 137.6 7.6 216 84-322 130-348 (545)
209 KOG1524 WD40 repeat-containing 99.7 2.2E-16 4.8E-21 130.0 17.6 206 52-288 75-282 (737)
210 KOG1523 Actin-related protein 99.7 1.5E-15 3.3E-20 117.4 20.8 218 41-265 9-261 (361)
211 KOG1334 WD40 repeat protein [G 99.7 5.4E-17 1.2E-21 131.9 13.4 250 32-294 132-468 (559)
212 KOG0290 Conserved WD40 repeat- 99.7 3.3E-16 7.2E-21 119.5 16.4 180 7-197 118-362 (364)
213 KOG4227 WD40 repeat protein [G 99.7 1.4E-15 3E-20 120.8 20.0 246 76-337 50-386 (609)
214 KOG0771 Prolactin regulatory e 99.7 2.4E-16 5.2E-21 126.0 15.4 188 46-240 148-354 (398)
215 KOG1310 WD40 repeat protein [G 99.7 1E-16 2.2E-21 132.3 13.2 166 32-200 40-231 (758)
216 KOG2394 WD40 protein DMR-N9 [G 99.7 1.1E-15 2.4E-20 125.9 17.5 166 52-221 185-384 (636)
217 KOG2394 WD40 protein DMR-N9 [G 99.7 9.2E-16 2E-20 126.4 13.7 164 2-181 187-384 (636)
218 KOG2321 WD40 repeat protein [G 99.7 2.6E-14 5.6E-19 118.9 22.0 260 2-294 66-345 (703)
219 TIGR03300 assembly_YfgL outer 99.7 2.7E-13 5.8E-18 116.1 28.8 258 2-296 67-342 (377)
220 PRK03629 tolB translocation pr 99.7 7.3E-14 1.6E-18 120.7 25.2 214 40-264 196-428 (429)
221 KOG2139 WD40 repeat protein [G 99.7 3.3E-14 7.3E-19 111.9 20.7 236 43-294 99-385 (445)
222 KOG4497 Uncharacterized conser 99.7 2.7E-14 5.8E-19 111.1 18.3 186 49-241 15-241 (447)
223 PRK04922 tolB translocation pr 99.7 7.6E-14 1.7E-18 121.1 23.4 230 10-263 184-432 (433)
224 PRK03629 tolB translocation pr 99.6 3.8E-13 8.3E-18 116.3 27.1 231 63-318 180-427 (429)
225 PRK05137 tolB translocation pr 99.6 3.7E-13 8.1E-18 117.0 27.1 213 62-294 182-414 (435)
226 PF10282 Lactonase: Lactonase, 99.6 2.1E-11 4.5E-16 102.6 36.5 265 3-292 2-322 (345)
227 KOG4497 Uncharacterized conser 99.6 2.3E-13 4.9E-18 106.0 21.5 267 42-330 48-424 (447)
228 PRK04922 tolB translocation pr 99.6 2.5E-13 5.4E-18 117.9 23.8 212 62-293 184-412 (433)
229 KOG1409 Uncharacterized conser 99.6 6.7E-14 1.5E-18 109.5 17.1 252 31-299 13-277 (404)
230 KOG2321 WD40 repeat protein [G 99.6 3.1E-13 6.7E-18 112.6 21.8 270 40-332 49-337 (703)
231 KOG3881 Uncharacterized conser 99.6 1.3E-13 2.7E-18 109.7 17.8 207 2-220 117-340 (412)
232 PF08662 eIF2A: Eukaryotic tra 99.6 4.4E-13 9.6E-18 102.4 19.7 136 62-207 37-185 (194)
233 PRK05137 tolB translocation pr 99.6 1.3E-12 2.8E-17 113.6 24.9 228 11-263 183-432 (435)
234 PRK02889 tolB translocation pr 99.6 1E-12 2.2E-17 113.7 23.7 216 38-264 191-425 (427)
235 TIGR03300 assembly_YfgL outer 99.6 7.8E-12 1.7E-16 107.1 28.3 252 2-289 107-376 (377)
236 PF02239 Cytochrom_D1: Cytochr 99.6 8.2E-12 1.8E-16 105.0 27.2 186 101-295 6-205 (369)
237 KOG0974 WD-repeat protein WDR6 99.6 9.8E-13 2.1E-17 116.8 21.1 139 2-161 147-289 (967)
238 PRK02889 tolB translocation pr 99.6 5.8E-12 1.3E-16 109.1 25.0 210 62-291 176-402 (427)
239 PF08662 eIF2A: Eukaryotic tra 99.6 2.6E-12 5.6E-17 98.3 20.2 154 87-249 9-187 (194)
240 KOG1310 WD40 repeat protein [G 99.5 1.5E-13 3.2E-18 114.0 12.2 207 74-295 42-306 (758)
241 KOG0974 WD-repeat protein WDR6 99.5 7.5E-13 1.6E-17 117.5 17.3 188 52-294 99-290 (967)
242 TIGR02800 propeller_TolB tol-p 99.5 2.2E-11 4.8E-16 105.9 25.0 201 39-249 186-405 (417)
243 KOG0280 Uncharacterized conser 99.5 3.9E-12 8.4E-17 97.7 16.9 189 3-202 88-286 (339)
244 KOG4547 WD40 repeat-containing 99.5 2.3E-11 4.9E-16 102.0 22.8 189 52-241 5-221 (541)
245 TIGR02800 propeller_TolB tol-p 99.5 3.4E-11 7.4E-16 104.8 25.0 211 62-292 170-397 (417)
246 PF10282 Lactonase: Lactonase, 99.5 7.5E-10 1.6E-14 93.3 32.0 258 55-329 2-312 (345)
247 COG2706 3-carboxymuconate cycl 99.5 4.2E-09 9.1E-14 83.9 32.5 268 2-294 4-323 (346)
248 KOG1334 WD40 repeat protein [G 99.5 6.9E-13 1.5E-17 108.5 11.7 253 74-336 134-464 (559)
249 TIGR02658 TTQ_MADH_Hv methylam 99.5 1.1E-09 2.3E-14 90.3 30.2 249 62-336 27-328 (352)
250 KOG1354 Serine/threonine prote 99.5 1.9E-11 4.2E-16 96.0 18.9 238 42-294 25-361 (433)
251 TIGR02658 TTQ_MADH_Hv methylam 99.5 2.3E-09 5E-14 88.4 31.6 259 10-298 27-336 (352)
252 PRK00178 tolB translocation pr 99.4 1.3E-10 2.9E-15 101.3 25.4 215 38-263 194-427 (430)
253 PRK00178 tolB translocation pr 99.4 2.1E-10 4.5E-15 100.0 26.5 211 63-293 180-407 (430)
254 KOG1354 Serine/threonine prote 99.4 2.6E-11 5.7E-16 95.3 18.4 228 2-243 39-362 (433)
255 PRK11138 outer membrane biogen 99.4 2.2E-10 4.7E-15 98.6 26.0 253 2-291 122-393 (394)
256 KOG1409 Uncharacterized conser 99.4 4.2E-11 9E-16 94.1 19.3 220 3-241 39-271 (404)
257 PRK11138 outer membrane biogen 99.4 2.7E-10 5.8E-15 98.0 26.4 266 2-295 71-356 (394)
258 KOG2315 Predicted translation 99.4 3.8E-10 8.2E-15 94.4 25.4 291 2-333 47-379 (566)
259 KOG4190 Uncharacterized conser 99.4 1.8E-12 4E-17 108.0 11.5 283 30-332 723-1030(1034)
260 KOG4190 Uncharacterized conser 99.4 3.1E-12 6.7E-17 106.7 12.4 269 2-288 749-1032(1034)
261 PRK04792 tolB translocation pr 99.4 2.1E-10 4.6E-15 99.7 24.4 213 40-263 215-446 (448)
262 KOG1064 RAVE (regulator of V-A 99.4 2.7E-12 5.8E-17 120.0 12.7 195 42-252 2208-2410(2439)
263 PF13360 PQQ_2: PQQ-like domai 99.4 9.5E-10 2.1E-14 88.0 26.1 219 9-247 2-237 (238)
264 PRK04792 tolB translocation pr 99.4 5E-10 1.1E-14 97.5 25.8 210 63-292 199-425 (448)
265 KOG2041 WD40 repeat protein [G 99.4 6.1E-11 1.3E-15 101.9 19.4 256 2-266 28-321 (1189)
266 KOG0280 Uncharacterized conser 99.4 2.3E-10 5E-15 88.2 20.4 200 110-321 46-266 (339)
267 PF13360 PQQ_2: PQQ-like domai 99.4 1.6E-09 3.4E-14 86.7 25.1 213 61-295 2-233 (238)
268 KOG4547 WD40 repeat-containing 99.4 4.5E-10 9.8E-15 94.4 21.9 187 101-294 6-222 (541)
269 KOG1064 RAVE (regulator of V-A 99.4 5.7E-12 1.2E-16 117.9 11.3 200 3-233 2223-2439(2439)
270 KOG1912 WD40 repeat protein [G 99.4 1.3E-09 2.9E-14 94.7 24.7 222 5-240 30-304 (1062)
271 PLN02919 haloacid dehalogenase 99.3 7.5E-09 1.6E-13 98.5 31.9 233 47-295 572-891 (1057)
272 KOG1912 WD40 repeat protein [G 99.3 6E-10 1.3E-14 96.8 20.3 308 1-337 80-550 (1062)
273 KOG3914 WD repeat protein WDR4 99.3 7.7E-11 1.7E-15 94.5 13.9 158 133-300 65-231 (390)
274 PRK01029 tolB translocation pr 99.3 5E-09 1.1E-13 90.6 25.3 215 41-264 183-425 (428)
275 KOG4532 WD40-like repeat conta 99.3 2.2E-09 4.8E-14 81.9 19.7 210 52-266 84-315 (344)
276 KOG2041 WD40 repeat protein [G 99.3 1E-10 2.2E-15 100.6 13.7 224 42-283 14-279 (1189)
277 COG2706 3-carboxymuconate cycl 99.3 5.2E-08 1.1E-12 77.8 27.1 254 61-330 15-312 (346)
278 PRK01029 tolB translocation pr 99.2 1.4E-08 3E-13 87.8 25.4 215 62-295 165-406 (428)
279 PF08450 SGL: SMP-30/Gluconola 99.2 4.2E-07 9.2E-12 73.0 32.3 203 47-263 4-234 (246)
280 PF04762 IKI3: IKI3 family; I 99.2 5.9E-08 1.3E-12 90.9 30.1 302 2-329 89-507 (928)
281 KOG2315 Predicted translation 99.2 1.4E-08 3E-13 85.2 23.1 230 46-294 129-392 (566)
282 KOG2695 WD40 repeat protein [G 99.2 8.9E-11 1.9E-15 92.4 9.3 164 146-318 228-402 (425)
283 COG4946 Uncharacterized protei 99.2 6.2E-08 1.4E-12 80.0 25.3 143 40-189 357-506 (668)
284 PF04762 IKI3: IKI3 family; I 99.2 1.6E-07 3.4E-12 88.2 31.2 271 42-330 75-448 (928)
285 COG5354 Uncharacterized protei 99.2 8.8E-08 1.9E-12 79.7 25.5 256 9-294 107-397 (561)
286 PLN02919 haloacid dehalogenase 99.2 1.8E-07 3.8E-12 89.4 31.1 195 44-244 625-892 (1057)
287 cd00216 PQQ_DH Dehydrogenases 99.2 1.7E-07 3.7E-12 82.8 28.8 266 2-296 63-428 (488)
288 KOG2314 Translation initiation 99.2 2.2E-08 4.8E-13 84.0 21.5 263 45-329 213-513 (698)
289 COG5354 Uncharacterized protei 99.2 1.3E-07 2.9E-12 78.7 25.4 266 41-333 31-384 (561)
290 KOG0309 Conserved WD40 repeat- 99.1 4.1E-10 8.9E-15 97.3 10.8 241 9-294 90-341 (1081)
291 COG4946 Uncharacterized protei 99.1 1.6E-07 3.5E-12 77.7 24.8 149 52-210 332-487 (668)
292 KOG3914 WD repeat protein WDR4 99.1 1.4E-09 3.1E-14 87.4 12.8 154 3-170 77-233 (390)
293 KOG4649 PQQ (pyrrolo-quinoline 99.1 4.1E-07 8.8E-12 69.7 25.0 266 3-294 26-353 (354)
294 KOG2066 Vacuolar assembly/sort 99.1 1.3E-08 2.7E-13 89.1 18.0 181 42-241 39-234 (846)
295 COG5170 CDC55 Serine/threonine 99.1 1E-08 2.2E-13 80.0 15.6 239 41-293 25-368 (460)
296 KOG4532 WD40-like repeat conta 99.1 1.1E-07 2.4E-12 72.8 19.7 191 2-209 86-291 (344)
297 cd00216 PQQ_DH Dehydrogenases 99.1 4.3E-07 9.3E-12 80.2 26.2 229 2-249 112-433 (488)
298 KOG1275 PAB-dependent poly(A) 99.1 8.1E-09 1.8E-13 91.5 15.0 189 52-291 147-341 (1118)
299 KOG4714 Nucleoporin [Nuclear s 99.0 1.6E-09 3.4E-14 82.3 9.2 206 74-293 27-255 (319)
300 KOG1645 RING-finger-containing 99.0 3.5E-08 7.6E-13 79.7 16.3 244 32-293 183-462 (463)
301 KOG2066 Vacuolar assembly/sort 99.0 7.3E-08 1.6E-12 84.5 18.2 173 3-200 52-233 (846)
302 KOG4714 Nucleoporin [Nuclear s 99.0 1.6E-08 3.5E-13 76.9 12.2 197 45-241 39-255 (319)
303 KOG2314 Translation initiation 99.0 3.1E-07 6.7E-12 77.4 20.7 236 64-322 192-459 (698)
304 COG5170 CDC55 Serine/threonine 99.0 2.1E-08 4.6E-13 78.3 12.8 198 83-295 26-312 (460)
305 PRK02888 nitrous-oxide reducta 99.0 1.7E-06 3.7E-11 75.8 25.6 226 3-241 69-405 (635)
306 PRK04043 tolB translocation pr 99.0 7.1E-07 1.5E-11 76.9 23.1 199 110-329 169-388 (419)
307 PRK04043 tolB translocation pr 98.9 2.1E-06 4.5E-11 74.1 25.6 209 62-293 169-401 (419)
308 PF00400 WD40: WD domain, G-be 98.9 4.8E-09 1E-13 57.5 6.3 39 120-158 1-39 (39)
309 PF08450 SGL: SMP-30/Gluconola 98.9 1.2E-05 2.7E-10 64.6 28.9 167 45-220 42-233 (246)
310 KOG2695 WD40 repeat protein [G 98.9 6.5E-09 1.4E-13 82.2 8.6 127 41-173 251-389 (425)
311 PF15492 Nbas_N: Neuroblastoma 98.9 5.1E-06 1.1E-10 64.7 24.0 191 89-295 3-262 (282)
312 KOG1832 HIV-1 Vpr-binding prot 98.9 7.4E-10 1.6E-14 97.7 3.3 200 32-249 1091-1300(1516)
313 KOG2114 Vacuolar assembly/sort 98.9 1.4E-06 3.1E-11 77.3 23.0 205 44-256 27-259 (933)
314 KOG0882 Cyclophilin-related pe 98.9 8.3E-08 1.8E-12 78.7 14.4 203 40-249 7-240 (558)
315 KOG2114 Vacuolar assembly/sort 98.9 9.1E-07 2E-11 78.5 21.1 190 2-209 37-252 (933)
316 KOG0309 Conserved WD40 repeat- 98.9 6.3E-08 1.4E-12 84.2 12.9 221 42-266 24-258 (1081)
317 TIGR03075 PQQ_enz_alc_DH PQQ-d 98.9 3.3E-05 7.1E-10 68.7 30.4 190 2-205 71-338 (527)
318 PF00400 WD40: WD domain, G-be 98.8 1E-08 2.2E-13 56.2 5.3 39 242-290 1-39 (39)
319 KOG1275 PAB-dependent poly(A) 98.8 1.3E-07 2.9E-12 84.1 14.8 176 3-199 150-341 (1118)
320 KOG0882 Cyclophilin-related pe 98.8 3.9E-08 8.4E-13 80.6 10.3 198 83-295 9-234 (558)
321 PF00780 CNH: CNH domain; Int 98.8 2.3E-05 4.9E-10 64.2 25.9 217 52-296 7-259 (275)
322 PF07433 DUF1513: Protein of u 98.8 4.2E-05 9.2E-10 61.5 26.9 212 53-283 18-277 (305)
323 KOG4649 PQQ (pyrrolo-quinoline 98.8 5.8E-06 1.3E-10 63.5 19.7 187 52-247 23-213 (354)
324 KOG1832 HIV-1 Vpr-binding prot 98.8 4.3E-09 9.2E-14 93.1 3.3 195 73-295 1092-1294(1516)
325 TIGR03075 PQQ_enz_alc_DH PQQ-d 98.8 3E-05 6.5E-10 69.0 26.9 233 2-249 122-499 (527)
326 KOG3617 WD40 and TPR repeat-co 98.7 1.3E-06 2.8E-11 77.6 17.1 101 52-160 27-131 (1416)
327 PF07433 DUF1513: Protein of u 98.7 9E-05 2E-09 59.6 25.6 199 85-298 6-253 (305)
328 PF15492 Nbas_N: Neuroblastoma 98.7 8.7E-05 1.9E-09 58.1 25.0 189 43-249 44-268 (282)
329 PF04053 Coatomer_WDAD: Coatom 98.7 8.3E-05 1.8E-09 64.2 25.9 249 10-294 2-264 (443)
330 PRK02888 nitrous-oxide reducta 98.7 4.5E-05 9.6E-10 67.2 24.1 229 54-293 68-405 (635)
331 KOG3621 WD40 repeat-containing 98.7 6.9E-06 1.5E-10 71.6 19.0 149 45-201 38-198 (726)
332 PF03178 CPSF_A: CPSF A subuni 98.6 9E-05 1.9E-09 62.1 24.3 224 62-289 2-262 (321)
333 PF03178 CPSF_A: CPSF A subuni 98.6 5.2E-05 1.1E-09 63.5 22.7 193 110-314 2-230 (321)
334 PF06433 Me-amine-dh_H: Methyl 98.5 0.00027 5.9E-09 57.7 24.6 189 52-249 106-329 (342)
335 KOG1920 IkappaB kinase complex 98.5 7.1E-05 1.5E-09 69.5 23.1 193 42-242 68-324 (1265)
336 PF08596 Lgl_C: Lethal giant l 98.5 6.1E-05 1.3E-09 64.1 21.3 230 85-330 3-328 (395)
337 KOG1645 RING-finger-containing 98.5 1.5E-05 3.3E-10 64.9 16.2 221 3-240 209-461 (463)
338 PF06433 Me-amine-dh_H: Methyl 98.5 0.00037 8E-09 56.9 25.1 216 62-296 17-324 (342)
339 KOG3621 WD40 repeat-containing 98.5 4.6E-05 1E-09 66.6 19.8 121 3-140 48-180 (726)
340 PF11768 DUF3312: Protein of u 98.5 2E-05 4.3E-10 67.7 17.0 111 45-163 208-332 (545)
341 KOG1008 Uncharacterized conser 98.4 1.3E-07 2.7E-12 81.1 3.3 194 42-240 56-275 (783)
342 PF11768 DUF3312: Protein of u 98.4 0.00048 1E-08 59.5 24.5 88 195-294 239-331 (545)
343 KOG1920 IkappaB kinase complex 98.4 0.00018 3.9E-09 67.0 22.3 195 83-294 68-324 (1265)
344 PF00780 CNH: CNH domain; Int 98.4 0.0008 1.7E-08 55.1 26.9 219 2-249 9-264 (275)
345 PF14783 BBS2_Mid: Ciliary BBS 98.4 8E-05 1.7E-09 50.0 14.5 98 45-155 2-109 (111)
346 PF06977 SdiA-regulated: SdiA- 98.3 0.00078 1.7E-08 53.4 26.6 196 77-289 16-247 (248)
347 PF08596 Lgl_C: Lethal giant l 98.3 0.0011 2.3E-08 56.7 24.2 215 44-266 3-319 (395)
348 PF05096 Glu_cyclase_2: Glutam 98.3 0.00081 1.8E-08 53.1 24.5 191 74-280 35-249 (264)
349 PF14727 PHTB1_N: PTHB1 N-term 98.3 0.0018 3.9E-08 55.4 29.7 271 2-294 39-362 (418)
350 PF08553 VID27: VID27 cytoplas 98.3 3.5E-05 7.6E-10 70.3 14.6 139 143-292 494-647 (794)
351 KOG4640 Anaphase-promoting com 98.2 8E-06 1.7E-10 70.3 9.0 92 83-180 20-114 (665)
352 PF04841 Vps16_N: Vps16, N-ter 98.2 0.0018 3.8E-08 56.0 23.4 183 43-238 81-285 (410)
353 PF04053 Coatomer_WDAD: Coatom 98.2 0.00063 1.4E-08 58.9 20.1 164 83-264 32-207 (443)
354 PF06977 SdiA-regulated: SdiA- 98.2 0.0021 4.5E-08 51.0 25.5 196 35-237 14-247 (248)
355 PF14783 BBS2_Mid: Ciliary BBS 98.1 0.0005 1.1E-08 46.2 14.4 100 133-236 2-110 (111)
356 TIGR03074 PQQ_membr_DH membran 98.1 0.0047 1E-07 57.4 24.7 197 52-249 194-486 (764)
357 KOG1008 Uncharacterized conser 98.1 1.1E-06 2.3E-11 75.7 1.4 181 3-200 73-275 (783)
358 KOG3617 WD40 and TPR repeat-co 98.0 1.9E-05 4.2E-10 70.5 7.5 137 172-319 16-160 (1416)
359 COG3391 Uncharacterized conser 98.0 0.0073 1.6E-07 51.9 24.9 210 47-265 78-310 (381)
360 PF04841 Vps16_N: Vps16, N-ter 98.0 0.0079 1.7E-07 52.1 24.8 191 63-266 62-272 (410)
361 PF08553 VID27: VID27 cytoplas 98.0 0.00041 8.8E-09 63.6 15.6 142 57-200 499-647 (794)
362 KOG2444 WD40 repeat protein [G 97.9 1.6E-05 3.4E-10 60.1 4.8 143 144-298 32-183 (238)
363 KOG4441 Proteins containing BT 97.9 0.0076 1.6E-07 54.5 21.7 226 52-295 285-549 (571)
364 KOG2395 Protein involved in va 97.9 0.00027 6E-09 60.1 11.7 138 144-292 348-500 (644)
365 PRK13616 lipoprotein LpqB; Pro 97.9 0.0046 1E-07 55.8 20.0 203 61-286 328-562 (591)
366 smart00320 WD40 WD40 repeats. 97.8 6.7E-05 1.5E-09 40.1 5.4 38 121-158 3-40 (40)
367 PHA02713 hypothetical protein; 97.8 0.0034 7.3E-08 56.7 18.8 184 50-243 302-536 (557)
368 PF00930 DPPIV_N: Dipeptidyl p 97.8 0.012 2.6E-07 50.1 21.1 246 61-327 22-346 (353)
369 COG0823 TolB Periplasmic compo 97.8 0.0018 3.9E-08 56.0 15.9 141 62-209 218-367 (425)
370 COG3386 Gluconolactonase [Carb 97.8 0.014 3.1E-07 48.1 23.1 159 52-220 77-263 (307)
371 KOG2079 Vacuolar assembly/sort 97.8 0.00031 6.7E-09 64.7 11.1 96 3-117 102-202 (1206)
372 COG0823 TolB Periplasmic compo 97.8 0.0045 9.7E-08 53.6 17.5 173 64-244 175-362 (425)
373 smart00320 WD40 WD40 repeats. 97.8 8.9E-05 1.9E-09 39.6 5.0 39 242-290 2-40 (40)
374 COG3204 Uncharacterized protei 97.7 0.015 3.3E-07 46.3 18.3 164 79-249 82-271 (316)
375 COG3386 Gluconolactonase [Carb 97.7 0.019 4.2E-07 47.3 22.4 199 53-264 38-265 (307)
376 COG3490 Uncharacterized protei 97.7 0.018 3.8E-07 45.7 19.7 221 52-291 80-347 (366)
377 PF05096 Glu_cyclase_2: Glutam 97.7 0.017 3.8E-07 45.8 17.9 191 122-325 35-248 (264)
378 COG3391 Uncharacterized conser 97.6 0.033 7.2E-07 47.9 30.1 197 85-296 75-287 (381)
379 KOG4640 Anaphase-promoting com 97.6 0.00037 8.1E-09 60.5 8.9 89 131-220 21-114 (665)
380 KOG2395 Protein involved in va 97.6 0.0036 7.8E-08 53.6 13.6 143 54-200 348-500 (644)
381 PHA02713 hypothetical protein; 97.5 0.011 2.3E-07 53.6 17.4 211 63-295 273-536 (557)
382 COG3292 Predicted periplasmic 97.5 0.023 5.1E-07 49.4 17.5 264 43-325 206-480 (671)
383 KOG2079 Vacuolar assembly/sort 97.5 0.0048 1.1E-07 57.3 14.1 109 45-160 92-203 (1206)
384 KOG4441 Proteins containing BT 97.5 0.037 8.1E-07 50.1 19.6 219 3-243 288-549 (571)
385 KOG2444 WD40 repeat protein [G 97.4 0.00052 1.1E-08 52.1 5.8 104 52-160 70-177 (238)
386 PF02897 Peptidase_S9_N: Proly 97.4 0.087 1.9E-06 46.1 28.0 233 47-295 128-407 (414)
387 KOG1897 Damage-specific DNA bi 97.3 0.13 2.9E-06 47.9 28.8 316 1-332 270-607 (1096)
388 COG1520 FOG: WD40-like repeat 97.3 0.092 2E-06 45.1 22.8 191 52-249 68-277 (370)
389 PRK13616 lipoprotein LpqB; Pro 97.3 0.075 1.6E-06 48.3 19.5 196 109-320 328-552 (591)
390 PF15390 DUF4613: Domain of un 97.3 0.084 1.8E-06 46.4 18.2 150 42-200 19-186 (671)
391 PF05694 SBP56: 56kDa selenium 97.2 0.1 2.2E-06 44.5 18.8 146 52-202 141-344 (461)
392 KOG4499 Ca2+-binding protein R 97.2 0.06 1.3E-06 41.5 19.2 206 52-265 27-265 (310)
393 PF14781 BBS2_N: Ciliary BBSom 97.1 0.043 9.4E-07 38.4 13.1 113 136-248 4-133 (136)
394 COG3490 Uncharacterized protei 97.1 0.088 1.9E-06 41.9 18.6 206 84-302 68-320 (366)
395 PF02897 Peptidase_S9_N: Proly 97.1 0.17 3.6E-06 44.3 25.2 190 86-292 126-357 (414)
396 PF00930 DPPIV_N: Dipeptidyl p 97.1 0.15 3.2E-06 43.5 21.2 239 8-266 21-340 (353)
397 COG3823 Glutamine cyclotransfe 97.1 0.055 1.2E-06 41.0 13.3 170 101-280 57-247 (262)
398 PF05694 SBP56: 56kDa selenium 97.1 0.16 3.5E-06 43.3 20.7 186 101-295 88-345 (461)
399 TIGR03074 PQQ_membr_DH membran 97.1 0.28 6.1E-06 46.0 23.0 152 52-208 260-485 (764)
400 KOG4499 Ca2+-binding protein R 97.1 0.093 2E-06 40.5 14.8 130 84-221 109-263 (310)
401 PF12894 Apc4_WD40: Anaphase-p 96.9 0.0039 8.5E-08 35.0 5.1 34 83-122 11-44 (47)
402 PHA03098 kelch-like protein; P 96.9 0.13 2.9E-06 46.6 17.5 183 50-243 293-514 (534)
403 KOG1897 Damage-specific DNA bi 96.9 0.41 8.9E-06 44.9 30.4 174 111-294 751-944 (1096)
404 PF14870 PSII_BNR: Photosynthe 96.9 0.2 4.4E-06 41.2 29.9 227 44-289 63-301 (302)
405 PF14781 BBS2_N: Ciliary BBSom 96.8 0.095 2.1E-06 36.7 12.9 106 101-208 11-133 (136)
406 PF10433 MMS1_N: Mono-function 96.8 0.38 8.3E-06 43.3 26.6 249 2-263 224-503 (504)
407 PF14727 PHTB1_N: PTHB1 N-term 96.7 0.32 6.9E-06 42.0 17.6 140 142-292 37-204 (418)
408 PF12234 Rav1p_C: RAVE protein 96.7 0.32 6.9E-06 44.2 18.0 142 10-160 1-156 (631)
409 PF12894 Apc4_WD40: Anaphase-p 96.7 0.0076 1.7E-07 33.8 5.2 34 130-164 11-44 (47)
410 PHA02790 Kelch-like protein; P 96.7 0.25 5.3E-06 44.1 17.4 180 52-243 272-473 (480)
411 COG5167 VID27 Protein involved 96.7 0.072 1.6E-06 46.0 12.7 140 141-292 478-632 (776)
412 PHA03098 kelch-like protein; P 96.5 0.31 6.6E-06 44.3 17.3 146 47-203 338-514 (534)
413 PF14583 Pectate_lyase22: Olig 96.5 0.41 8.9E-06 40.5 28.3 261 52-330 47-372 (386)
414 KOG2280 Vacuolar assembly/sort 96.5 0.14 3.1E-06 46.3 13.9 169 42-220 83-268 (829)
415 PF12234 Rav1p_C: RAVE protein 96.2 0.29 6.2E-06 44.4 14.6 108 132-240 31-156 (631)
416 TIGR03118 PEPCTERM_chp_1 conse 96.1 0.6 1.3E-05 37.9 21.2 202 85-295 24-282 (336)
417 COG3292 Predicted periplasmic 96.0 0.82 1.8E-05 40.4 15.8 267 41-330 163-439 (671)
418 COG3204 Uncharacterized protei 95.9 0.69 1.5E-05 37.3 18.4 156 40-200 83-263 (316)
419 PF14870 PSII_BNR: Photosynthe 95.9 0.8 1.7E-05 37.8 23.9 148 83-237 144-301 (302)
420 KOG3630 Nuclear pore complex, 95.8 0.19 4.1E-06 47.8 11.8 137 83-223 100-255 (1405)
421 PF07569 Hira: TUP1-like enhan 95.8 0.088 1.9E-06 41.2 8.7 63 138-200 18-95 (219)
422 PF08728 CRT10: CRT10; InterP 95.8 0.72 1.6E-05 42.5 15.3 112 43-159 101-245 (717)
423 PRK13684 Ycf48-like protein; P 95.7 1.1 2.3E-05 38.0 25.4 150 130-292 172-331 (334)
424 PHA02790 Kelch-like protein; P 95.7 1.5 3.2E-05 39.3 17.5 107 48-167 315-430 (480)
425 COG5276 Uncharacterized conser 95.7 0.87 1.9E-05 36.8 26.0 152 43-204 87-245 (370)
426 KOG3630 Nuclear pore complex, 95.6 0.2 4.3E-06 47.6 11.0 142 172-325 101-260 (1405)
427 PF07569 Hira: TUP1-like enhan 95.3 0.22 4.7E-06 39.1 9.3 70 43-119 13-96 (219)
428 COG5276 Uncharacterized conser 95.3 1.2 2.7E-05 35.9 24.5 188 83-294 86-287 (370)
429 COG5167 VID27 Protein involved 95.2 0.62 1.4E-05 40.5 12.1 143 54-200 482-632 (776)
430 COG3823 Glutamine cyclotransfe 95.2 1 2.3E-05 34.4 12.4 102 141-243 55-161 (262)
431 PF07995 GSDH: Glucose / Sorbo 95.1 1.8 3.8E-05 36.6 22.6 236 85-331 3-328 (331)
432 TIGR02604 Piru_Ver_Nterm putat 95.0 2.1 4.5E-05 36.8 15.4 139 43-189 14-201 (367)
433 KOG2247 WD40 repeat-containing 94.9 0.0044 9.6E-08 52.7 -1.1 146 87-239 38-187 (615)
434 KOG1916 Nuclear protein, conta 94.8 0.071 1.5E-06 49.2 5.8 107 52-165 195-328 (1283)
435 PF15390 DUF4613: Domain of un 94.7 2.9 6.4E-05 37.3 17.9 146 84-241 20-187 (671)
436 PF14655 RAB3GAP2_N: Rab3 GTPa 94.6 1 2.2E-05 39.0 12.0 83 83-170 307-408 (415)
437 COG1520 FOG: WD40-like repeat 94.5 2.8 6.1E-05 36.1 27.9 152 52-211 111-279 (370)
438 PF08728 CRT10: CRT10; InterP 94.3 2.8 6E-05 38.9 14.5 95 214-320 103-222 (717)
439 KOG1898 Splicing factor 3b, su 94.3 5.4 0.00012 38.3 17.7 171 111-292 854-1048(1205)
440 PRK13684 Ycf48-like protein; P 94.2 3 6.5E-05 35.3 26.1 145 171-327 172-321 (334)
441 PRK10115 protease 2; Provision 94.2 4.9 0.00011 37.8 24.7 191 84-292 127-344 (686)
442 PF10313 DUF2415: Uncharacteri 94.0 0.31 6.7E-06 26.6 5.0 32 131-162 1-35 (43)
443 PF10313 DUF2415: Uncharacteri 93.8 0.45 9.7E-06 26.0 5.4 34 84-119 1-34 (43)
444 PF10168 Nup88: Nuclear pore c 93.8 3.1 6.7E-05 39.1 14.3 25 132-156 86-110 (717)
445 KOG2280 Vacuolar assembly/sort 93.6 6 0.00013 36.6 17.0 193 61-264 63-270 (829)
446 KOG2377 Uncharacterized conser 93.5 2.6 5.6E-05 36.4 11.9 94 171-266 66-166 (657)
447 PF14583 Pectate_lyase22: Olig 93.3 4.6 0.0001 34.5 27.4 226 52-292 92-381 (386)
448 KOG2247 WD40 repeat-containing 93.2 0.0095 2.1E-07 50.8 -2.4 143 132-286 36-182 (615)
449 KOG1916 Nuclear protein, conta 93.2 0.17 3.8E-06 46.8 5.1 98 39-142 129-236 (1283)
450 KOG1900 Nuclear pore complex, 93.0 1.4 3.1E-05 43.0 10.8 161 106-293 95-273 (1311)
451 PF10168 Nup88: Nuclear pore c 92.9 8.4 0.00018 36.3 20.6 76 83-163 84-182 (717)
452 KOG1896 mRNA cleavage and poly 92.8 5.1 0.00011 39.1 13.9 141 9-160 1064-1213(1366)
453 PF03088 Str_synth: Strictosid 92.8 1.5 3.3E-05 28.6 7.8 44 149-192 34-77 (89)
454 TIGR02276 beta_rpt_yvtn 40-res 92.7 0.88 1.9E-05 24.5 6.2 40 140-179 1-41 (42)
455 PF10433 MMS1_N: Mono-function 92.7 7.5 0.00016 35.1 27.8 245 52-318 222-503 (504)
456 PF14761 HPS3_N: Hermansky-Pud 92.5 4 8.7E-05 31.6 18.3 102 102-204 30-167 (215)
457 PF08801 Nucleoporin_N: Nup133 92.2 5.3 0.00012 35.1 13.1 31 254-293 190-220 (422)
458 PF14655 RAB3GAP2_N: Rab3 GTPa 92.2 4.1 8.8E-05 35.4 11.8 98 31-128 296-408 (415)
459 TIGR02276 beta_rpt_yvtn 40-res 92.1 0.87 1.9E-05 24.5 5.4 29 181-209 1-31 (42)
460 PF07995 GSDH: Glucose / Sorbo 91.7 7.3 0.00016 32.9 26.9 230 45-287 4-330 (331)
461 PLN00033 photosystem II stabil 91.6 8.4 0.00018 33.5 26.0 145 133-289 241-396 (398)
462 PF10395 Utp8: Utp8 family; I 91.5 11 0.00025 34.7 21.8 160 83-249 129-314 (670)
463 KOG1983 Tomosyn and related SN 91.4 8.1 0.00018 38.0 14.1 70 210-294 197-266 (993)
464 KOG1900 Nuclear pore complex, 91.4 7.4 0.00016 38.4 13.3 137 4-161 93-273 (1311)
465 PF02333 Phytase: Phytase; In 91.0 9.2 0.0002 32.8 25.1 186 101-294 69-292 (381)
466 PF14761 HPS3_N: Hermansky-Pud 90.9 6.2 0.00013 30.6 16.1 108 47-162 22-165 (215)
467 TIGR03548 mutarot_permut cycli 90.9 8.8 0.00019 32.3 21.3 110 47-164 68-198 (323)
468 smart00564 PQQ beta-propeller 90.9 0.75 1.6E-05 23.2 4.0 27 222-248 6-32 (33)
469 KOG4460 Nuclear pore complex, 90.8 8.2 0.00018 34.2 12.0 27 132-158 105-131 (741)
470 KOG2377 Uncharacterized conser 90.6 11 0.00024 32.8 13.0 151 45-202 25-187 (657)
471 PRK10115 protease 2; Provision 90.6 16 0.00034 34.6 28.7 187 45-239 129-343 (686)
472 PF11715 Nup160: Nucleoporin N 90.3 3.6 7.9E-05 37.6 10.5 72 51-127 157-257 (547)
473 PF11715 Nup160: Nucleoporin N 90.2 3.3 7.2E-05 37.8 10.1 70 101-170 159-258 (547)
474 PF11725 AvrE: Pathogenicity f 90.1 23 0.0005 36.4 15.6 166 148-325 619-812 (1774)
475 PF01011 PQQ: PQQ enzyme repea 89.9 1.2 2.5E-05 23.6 4.3 26 224-249 2-27 (38)
476 COG4590 ABC-type uncharacteriz 89.9 3.2 6.9E-05 35.9 8.7 104 101-204 281-390 (733)
477 KOG3522 Predicted guanine nucl 89.3 5 0.00011 37.5 10.1 146 54-209 549-706 (925)
478 PF13570 PQQ_3: PQQ-like domai 89.3 1.2 2.6E-05 23.9 4.1 21 221-241 20-40 (40)
479 PF12341 DUF3639: Protein of u 89.2 1.2 2.6E-05 21.5 3.5 26 43-68 2-27 (27)
480 KOG3616 Selective LIM binding 89.1 4 8.7E-05 37.7 9.2 68 83-158 14-81 (1636)
481 PF07250 Glyoxal_oxid_N: Glyox 88.6 11 0.00024 30.1 11.5 139 64-209 48-206 (243)
482 smart00564 PQQ beta-propeller 88.3 1.6 3.4E-05 22.0 4.1 27 52-78 6-32 (33)
483 TIGR02604 Piru_Ver_Nterm putat 88.1 16 0.00035 31.4 16.4 99 84-189 14-141 (367)
484 PF12768 Rax2: Cortical protei 87.8 14 0.0003 30.3 11.6 111 64-181 18-146 (281)
485 PF12657 TFIIIC_delta: Transcr 87.8 6 0.00013 29.8 8.4 31 131-161 86-122 (173)
486 PF05935 Arylsulfotrans: Aryls 87.6 21 0.00045 32.1 18.7 174 54-238 117-365 (477)
487 PF01011 PQQ: PQQ enzyme repea 87.3 2 4.2E-05 22.7 4.1 28 54-81 2-29 (38)
488 PF10647 Gmad1: Lipoprotein Lp 87.3 14 0.0003 29.8 21.9 135 84-226 24-180 (253)
489 PF14779 BBS1: Ciliary BBSome 87.3 11 0.00023 30.4 9.7 75 83-157 176-255 (257)
490 KOG2063 Vacuolar assembly/sort 87.3 29 0.00063 33.5 14.2 244 42-306 15-283 (877)
491 PF10647 Gmad1: Lipoprotein Lp 86.9 15 0.00032 29.7 21.5 139 44-189 25-183 (253)
492 PF02333 Phytase: Phytase; In 86.9 19 0.00041 30.9 23.6 190 52-248 68-299 (381)
493 PLN02153 epithiospecifier prot 86.7 19 0.0004 30.6 21.1 109 50-164 31-171 (341)
494 KOG3522 Predicted guanine nucl 86.5 9.3 0.0002 35.9 10.0 140 3-163 550-700 (925)
495 KOG1896 mRNA cleavage and poly 86.5 36 0.00079 33.8 20.9 175 62-239 1004-1212(1366)
496 KOG1898 Splicing factor 3b, su 86.0 36 0.00078 33.2 17.7 172 63-240 854-1048(1205)
497 COG5290 IkappaB kinase complex 85.8 32 0.00069 32.5 13.7 92 175-267 250-350 (1243)
498 smart00036 CNH Domain found in 84.6 22 0.00048 29.6 26.3 227 2-249 15-279 (302)
499 PF12657 TFIIIC_delta: Transcr 83.9 12 0.00026 28.2 8.4 38 253-293 85-122 (173)
500 PF07250 Glyoxal_oxid_N: Glyox 83.4 22 0.00047 28.5 10.5 135 112-249 48-206 (243)
No 1
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=6.1e-50 Score=311.43 Aligned_cols=305 Identities=22% Similarity=0.263 Sum_probs=263.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeee-eEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSL-GAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~-~~~ 78 (343)
+|++|+.|.++|+||+.+ ..+.++.++|...|.|++|+ |..||+|+.||+|++||.++++++ ..+
T Consensus 129 ~l~tGsGD~TvR~WD~~T------------eTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l 196 (480)
T KOG0271|consen 129 RLVTGSGDTTVRLWDLDT------------ETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRAL 196 (480)
T ss_pred eEEecCCCceEEeeccCC------------CCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccc
Confidence 689999999999999998 57788999999999999999 899999999999999999998765 567
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
.+| ...|++|+|.|-.-....++|++++.||.|+|||+..++++..+.+|..+|+|+.|--+| ++++++.|++|++|+
T Consensus 197 ~gH-~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g-liySgS~DrtIkvw~ 274 (480)
T KOG0271|consen 197 RGH-KKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG-LIYSGSQDRTIKVWR 274 (480)
T ss_pred cCc-ccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCc-eEEecCCCceEEEEE
Confidence 888 999999999986533444799999999999999999999999999999999999998654 899999999999999
Q ss_pred ccCCceeEEEE-cCCcceEEEEe-----------CCC-------------------------CEEEEE-eCCcEEEEEcc
Q 019326 159 LVRGRRSFYHK-IGKEASLIKFD-----------GSG-------------------------EKFFMV-TEEKVGIHQAE 200 (343)
Q Consensus 159 ~~~~~~~~~~~-~~~~~~~~~~~-----------~~~-------------------------~~~~~~-~~~~i~~~d~~ 200 (343)
...|....... +.+.|+.++++ |.+ +.++++ .|.++.+|+..
T Consensus 275 a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~ 354 (480)
T KOG0271|consen 275 ALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPF 354 (480)
T ss_pred ccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccc
Confidence 99887655443 44666666654 323 358888 89999999976
Q ss_pred cce-eEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEE
Q 019326 201 DAK-LLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLV 277 (343)
Q Consensus 201 ~~~-~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l 277 (343)
..+ ++..+. |..-|+.+.|+| +.++++++.|..|++||.++|+.+.+++ +|-.+|..++|+.+.. +|
T Consensus 355 ~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfR-GHv~~VYqvawsaDsR---------Ll 424 (480)
T KOG0271|consen 355 KSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFR-GHVAAVYQVAWSADSR---------LL 424 (480)
T ss_pred ccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhh-hccceeEEEEeccCcc---------EE
Confidence 544 554444 888999999995 6799999999999999999999999999 9999999999999987 99
Q ss_pred EEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCC
Q 019326 278 ASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKG 334 (343)
Q Consensus 278 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~ 334 (343)
++||.|.++++|++++.+.....| .+...|.+++|+|||...+.+..|+..+.
T Consensus 425 VS~SkDsTLKvw~V~tkKl~~DLp----Gh~DEVf~vDwspDG~rV~sggkdkv~~l 477 (480)
T KOG0271|consen 425 VSGSKDSTLKVWDVRTKKLKQDLP----GHADEVFAVDWSPDGQRVASGGKDKVLRL 477 (480)
T ss_pred EEcCCCceEEEEEeeeeeecccCC----CCCceEEEEEecCCCceeecCCCceEEEe
Confidence 999999999999999875333222 35667999999999999999998876654
No 2
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.2e-47 Score=291.47 Aligned_cols=318 Identities=41% Similarity=0.629 Sum_probs=289.1
Q ss_pred CeeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 1 ~~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
|+|++|++...|.-+++...+..-.+....++.+++.+..|.++|+++|.++.++|+|+.|-+|+|||+.+...+..+..
T Consensus 2 m~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~ 81 (362)
T KOG0294|consen 2 MEIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLS 81 (362)
T ss_pred eeEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceec
Confidence 79999999999999999875433334566778899999999999999999999999999999999999999999999998
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
| .+.|+++.|.++... ..|++|+.||.|.+|+...++++..+++|.+.|+.++.+|.+++.++.+.|+.+++||+-
T Consensus 82 H-agsitaL~F~~~~S~---shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV 157 (362)
T KOG0294|consen 82 H-AGSITALKFYPPLSK---SHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLV 157 (362)
T ss_pred c-ccceEEEEecCCcch---hheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhh
Confidence 9 999999999988721 389999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECC
Q 019326 161 RGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTN 240 (343)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~ 240 (343)
+|+......+......+.|+|.|.+|++...+.|-+|.+.+......+..+..+.|+.|.+++.|++|.+|+.|.+||..
T Consensus 158 ~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~d 237 (362)
T KOG0294|consen 158 RGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLKDTD 237 (362)
T ss_pred cCccceeeccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEeccC
Confidence 99999999999999999999999999999999999999999999998888889999999899999999999999999999
Q ss_pred CCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCC
Q 019326 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTK 320 (343)
Q Consensus 241 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 320 (343)
...++..+. +|..+|.++.+..+.. +.+|+|+|.||.|+|||++...+..+.++.....+.+++|+...-..
T Consensus 238 s~~~~~~~~-AH~~RVK~i~~~~~~~-------~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~~~RltCl~~~~~~ 309 (362)
T KOG0294|consen 238 SDTPLTEFL-AHENRVKDIASYTNPE-------HEYLVTASSDGFIKVWDIDMETKKRPTLLAELNTNVRLTCLRVKLEK 309 (362)
T ss_pred CCccceeee-cchhheeeeEEEecCC-------ceEEEEeccCceEEEEEccccccCCcceeEEeecCCccceeeehhhh
Confidence 999999999 9999999999765533 34999999999999999999988899999999999999999987666
Q ss_pred ceeccccCCC
Q 019326 321 SFKRPQIGDS 330 (343)
Q Consensus 321 ~~~~~~~~~~ 330 (343)
.-......++
T Consensus 310 ~~k~~~~~~~ 319 (362)
T KOG0294|consen 310 SPKAKVESDQ 319 (362)
T ss_pred cccccccccc
Confidence 5555444343
No 3
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=4.9e-48 Score=304.15 Aligned_cols=262 Identities=20% Similarity=0.259 Sum_probs=247.1
Q ss_pred CeeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec----CceEEEeeCCCeEEEEEcCCCeeee
Q 019326 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS----GTAAASGGTDDTIHLYDLSTSSSLG 76 (343)
Q Consensus 1 ~~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~l~s~~~dg~i~iwd~~~~~~~~ 76 (343)
+.|++|+.+|.+++|+... ...+.+|.||...|.++.|+ +..+|||+.||++++|++.+..++.
T Consensus 188 ~~laT~swsG~~kvW~~~~------------~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~ 255 (459)
T KOG0272|consen 188 KHLATGSWSGLVKVWSVPQ------------CNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQ 255 (459)
T ss_pred CeEEEeecCCceeEeecCC------------cceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchh
Confidence 3589999999999999987 67888999999999999998 3489999999999999999999999
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEE
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAM 156 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~ 156 (343)
.+.+| ...|..++|+|+| ++|++++.|.+-++||+.++..+...++|...|.+++|+|||..+++|+.|..-++
T Consensus 256 ~l~gH-~~RVs~VafHPsG-----~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~Rv 329 (459)
T KOG0272|consen 256 DLEGH-LARVSRVAFHPSG-----KFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRV 329 (459)
T ss_pred hhhcc-hhhheeeeecCCC-----ceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhhe
Confidence 99999 8999999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC--CCeEEEEeCC
Q 019326 157 VNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE--NGVLFTGGED 231 (343)
Q Consensus 157 wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~--~~~l~~~~~d 231 (343)
||+++++++.... +-.+|..+.|+|+|..++++ .|++++|||++..+.+..++ |..-|+.+.|++ +.+|++++.|
T Consensus 330 WDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD 409 (459)
T KOG0272|consen 330 WDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYD 409 (459)
T ss_pred eecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccC
Confidence 9999999877655 55889999999999999999 99999999999999988888 888899999984 6799999999
Q ss_pred CcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 232 RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 232 g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
++++||..+++.+++.+. +|.+.|.++.+++++. +++|++.|.++++|.
T Consensus 410 ~t~kiWs~~~~~~~ksLa-GHe~kV~s~Dis~d~~---------~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 410 NTVKIWSTRTWSPLKSLA-GHEGKVISLDISPDSQ---------AIATSSFDRTIKLWR 458 (459)
T ss_pred cceeeecCCCcccchhhc-CCccceEEEEeccCCc---------eEEEeccCceeeecc
Confidence 999999999999999999 9999999999999988 999999999999995
No 4
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3.6e-46 Score=293.66 Aligned_cols=279 Identities=22% Similarity=0.240 Sum_probs=252.9
Q ss_pred CCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC
Q 019326 40 AHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA 117 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 117 (343)
|-..||..+.|+ ++.|+||+.+|.+++|+..+...+..|.+| ...|.++.|+|..+ ...+++|+.||++++|++
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH-~~~v~~~~fhP~~~---~~~lat~s~Dgtvklw~~ 248 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGH-TSRVGAAVFHPVDS---DLNLATASADGTVKLWKL 248 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEecc-ccceeeEEEccCCC---ccceeeeccCCceeeecc
Confidence 567899999999 899999999999999999999999999999 99999999999831 268999999999999999
Q ss_pred CCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEE-EEcCCcceEEEEeCCCCEEEEE-eCCcEE
Q 019326 118 DPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFY-HKIGKEASLIKFDGSGEKFFMV-TEEKVG 195 (343)
Q Consensus 118 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~i~ 195 (343)
.+-.++..+.+|...|..++|+|+|++|++++.|.+-++||++++..+.. ..+...+.+++|.|+|..++++ .|..-+
T Consensus 249 ~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~R 328 (459)
T KOG0272|consen 249 SQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGR 328 (459)
T ss_pred CCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhh
Confidence 99899999999999999999999999999999999999999999886554 4566889999999999999999 899999
Q ss_pred EEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCC
Q 019326 196 IHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAEN 273 (343)
Q Consensus 196 ~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 273 (343)
|||+++++++..+. |..+|..+.|++ |..+++|+.|++++|||++....+..++ +|..-|+.+.|.|..
T Consensus 329 vWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ip-AH~nlVS~Vk~~p~~-------- 399 (459)
T KOG0272|consen 329 VWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIP-AHSNLVSQVKYSPQE-------- 399 (459)
T ss_pred eeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecc-cccchhhheEecccC--------
Confidence 99999999999998 889999999996 4589999999999999999999999999 999999999999832
Q ss_pred CeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCc
Q 019326 274 PYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 274 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~ 335 (343)
|++|+|+|.|++++||..++..+.+.. ..+.++|.++++++|+.+++...-|...+.+
T Consensus 400 g~fL~TasyD~t~kiWs~~~~~~~ksL----aGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW 457 (459)
T KOG0272|consen 400 GYFLVTASYDNTVKIWSTRTWSPLKSL----AGHEGKVISLDISPDSQAIATSSFDRTIKLW 457 (459)
T ss_pred CeEEEEcccCcceeeecCCCcccchhh----cCCccceEEEEeccCCceEEEeccCceeeec
Confidence 239999999999999999988533322 3556789999999999999999999887764
No 5
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=9.9e-46 Score=287.98 Aligned_cols=285 Identities=21% Similarity=0.248 Sum_probs=247.9
Q ss_pred EEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC
Q 019326 33 TQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG 110 (343)
Q Consensus 33 ~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg 110 (343)
.+-..+.||.++|.|++|+ +..|++|+.|.++|+||+.+..+..+.++| ...|.|++|+|++ +.|++|+.||
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH-~~WVlcvawsPDg-----k~iASG~~dg 179 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGH-KNWVLCVAWSPDG-----KKIASGSKDG 179 (480)
T ss_pred eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCC-ccEEEEEEECCCc-----chhhccccCC
Confidence 4456788999999999999 899999999999999999999999999999 9999999999999 8999999999
Q ss_pred eEEEEECCCccee-eeeeeccccEEEEEEec-----CCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCC
Q 019326 111 FVSIFDADPFVLL-TSVKVHKKGVNDLAVHH-----SGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSG 183 (343)
Q Consensus 111 ~i~iwd~~~~~~~-~~~~~~~~~v~~i~~~~-----~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~ 183 (343)
+|++||.++++++ ..+.+|...|++++|.| ..++|++++.||.++|||+..+.++.... +..+|+|+.|--+|
T Consensus 180 ~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g 259 (480)
T KOG0271|consen 180 SIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG 259 (480)
T ss_pred eEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCc
Confidence 9999999887754 67899999999999976 46899999999999999999888776554 55889999997544
Q ss_pred CEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeec------------CC-------------------------Ce
Q 019326 184 EKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG------------EN-------------------------GV 224 (343)
Q Consensus 184 ~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~------------~~-------------------------~~ 224 (343)
+++++ .|++|++|+...+++.+.++ |...|+.++.+ .+ ..
T Consensus 260 -liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~er 338 (480)
T KOG0271|consen 260 -LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGER 338 (480)
T ss_pred -eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcce
Confidence 56666 99999999999999998888 66667777664 02 24
Q ss_pred EEEEeCCCcEEEEECCCC-ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccc
Q 019326 225 LFTGGEDRSITAWDTNSG-KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLA 303 (343)
Q Consensus 225 l~~~~~dg~i~i~d~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 303 (343)
+++|++|.++.+|+.... +++..+. +|...|+.+.|+|++. ++|++|.|..|++||-++++ .+.
T Consensus 339 lVSgsDd~tlflW~p~~~kkpi~rmt-gHq~lVn~V~fSPd~r---------~IASaSFDkSVkLW~g~tGk-----~la 403 (480)
T KOG0271|consen 339 LVSGSDDFTLFLWNPFKSKKPITRMT-GHQALVNHVSFSPDGR---------YIASASFDKSVKLWDGRTGK-----FLA 403 (480)
T ss_pred eEEecCCceEEEecccccccchhhhh-chhhheeeEEECCCcc---------EEEEeecccceeeeeCCCcc-----hhh
Confidence 999999999999998654 4777787 9999999999999988 99999999999999999985 223
Q ss_pred ccc-cccceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 304 EAK-TNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 304 ~~~-~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
.+. +-+.|..++|+.|.+++++++.|..++.++...
T Consensus 404 sfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~t 440 (480)
T KOG0271|consen 404 SFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRT 440 (480)
T ss_pred hhhhccceeEEEEeccCccEEEEcCCCceEEEEEeee
Confidence 332 556799999999999999999999998877654
No 6
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-44 Score=266.64 Aligned_cols=289 Identities=18% Similarity=0.194 Sum_probs=250.4
Q ss_pred eEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCC-----CeeeeEeccCCCCCeEEEEEeCCCCCCCCceE
Q 019326 32 LTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLST-----SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNL 103 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l 103 (343)
+....++++|++.|+.++.. .+.+++++.|..+.+|++.. |..++.+.+| ...|..+..++++ ++.
T Consensus 5 l~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GH-sH~v~dv~~s~dg-----~~a 78 (315)
T KOG0279|consen 5 LVLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGH-SHFVSDVVLSSDG-----NFA 78 (315)
T ss_pred heeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeecc-ceEecceEEccCC-----ceE
Confidence 44566788999999999987 68999999999999998864 5678899999 9999999999999 899
Q ss_pred EEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc--CCcceEEEEeC
Q 019326 104 FSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI--GKEASLIKFDG 181 (343)
Q Consensus 104 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~ 181 (343)
++++.|+++++||+.+++..+.|.+|...|.+++|+++.+.+++|+.|++|++|++........... ...|+++.|+|
T Consensus 79 lS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP 158 (315)
T KOG0279|consen 79 LSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSP 158 (315)
T ss_pred EeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999987766555544 57899999999
Q ss_pred C--CCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccE
Q 019326 182 S--GEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARV 256 (343)
Q Consensus 182 ~--~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v 256 (343)
+ ..+++.+ .|+.+++||+++.+....+. |.+.++.++++ ++.++++|+.||.+.+||++.++.++.+. |...|
T Consensus 159 ~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~--a~~~v 236 (315)
T KOG0279|consen 159 NESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE--AFDIV 236 (315)
T ss_pred CCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc--CCCeE
Confidence 8 6677777 89999999999999988877 88899999999 56799999999999999999999999887 99999
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccccccc-----ccceeEEEcCCCCceeccccCCCC
Q 019326 257 KGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKT-----NSRLTCLAGSSTKSFKRPQIGDSA 331 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-----~~~i~~~~~s~~~~~~~~~~~~~~ 331 (343)
.+++|+|+. +.+.+..+..|+|||+.+........+..... ...-.+++||++|..+..+..++.
T Consensus 237 ~sl~fspnr----------ywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~ 306 (315)
T KOG0279|consen 237 NSLCFSPNR----------YWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNV 306 (315)
T ss_pred eeEEecCCc----------eeEeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCc
Confidence 999999997 55555566779999999885443333222222 234577899999999999999999
Q ss_pred CCCcccc
Q 019326 332 PKGEEKA 338 (343)
Q Consensus 332 ~~~~~~~ 338 (343)
++.++..
T Consensus 307 irv~qv~ 313 (315)
T KOG0279|consen 307 IRVWQVA 313 (315)
T ss_pred EEEEEee
Confidence 8877654
No 7
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=3e-42 Score=259.65 Aligned_cols=260 Identities=20% Similarity=0.267 Sum_probs=239.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC------e
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS------S 73 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~------~ 73 (343)
+|++++.||.+.|||.-+ ..+.+.++-...+|..++|+ ++++|+|+-|+...||++.+. +
T Consensus 69 ~ivSaSqDGklIvWDs~T------------tnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~ 136 (343)
T KOG0286|consen 69 RIVSASQDGKLIVWDSFT------------TNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVR 136 (343)
T ss_pred eEEeeccCCeEEEEEccc------------ccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccce
Confidence 689999999999999877 45566667778999999999 999999999999999999865 4
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEec-CCCEEEEEeCCC
Q 019326 74 SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH-SGKLALTVGRDD 152 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~d~ 152 (343)
..+++.+| .+.+.|+.|.+++ .|++++.|.+..+||+++++.+..|.+|.+.|.+++++| +++.+++|+-|+
T Consensus 137 v~r~l~gH-tgylScC~f~dD~------~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~ 209 (343)
T KOG0286|consen 137 VSRELAGH-TGYLSCCRFLDDN------HILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDK 209 (343)
T ss_pred eeeeecCc-cceeEEEEEcCCC------ceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEeccccc
Confidence 55678899 9999999999976 899999999999999999999999999999999999999 899999999999
Q ss_pred eEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCC---cceEEeeec-CCCeEE
Q 019326 153 CLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGK---KRILCAAPG-ENGVLF 226 (343)
Q Consensus 153 ~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~---~~i~~~~~~-~~~~l~ 226 (343)
..++||++.+.+...+. +...|+.++|.|+|..|+++ .|+.+++||++..+.+..+.+. .+|++++|+ .+++|+
T Consensus 210 ~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLf 289 (343)
T KOG0286|consen 210 SAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLF 289 (343)
T ss_pred ceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEE
Confidence 99999999998877655 45889999999999999999 9999999999999999988854 679999999 688999
Q ss_pred EEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 227 TGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 227 ~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
+|..|..+.+||.-.++.+..+. +|...|+++..+|++. .++|||.|.+++||.
T Consensus 290 agy~d~~c~vWDtlk~e~vg~L~-GHeNRvScl~~s~DG~---------av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 290 AGYDDFTCNVWDTLKGERVGVLA-GHENRVSCLGVSPDGM---------AVATGSWDSTLRIWA 343 (343)
T ss_pred eeecCCceeEeeccccceEEEee-ccCCeeEEEEECCCCc---------EEEecchhHheeecC
Confidence 99999999999999999999999 9999999999999998 999999999999994
No 8
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-42 Score=258.50 Aligned_cols=268 Identities=19% Similarity=0.202 Sum_probs=234.3
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
|+.++.|..+.+|++.. .......+++.++||...|..++.+ |++.++++.|+++++||+.+++..+.|.+
T Consensus 31 l~sasrDk~ii~W~L~~-------dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~G 103 (315)
T KOG0279|consen 31 LVSASRDKTIIVWKLTS-------DDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVG 103 (315)
T ss_pred EEEcccceEEEEEEecc-------CccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEe
Confidence 67899999999999987 3333456788999999999999998 99999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeec--cccEEEEEEecC--CCEEEEEeCCCeEEE
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVH--KKGVNDLAVHHS--GKLALTVGRDDCLAM 156 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~i~~~~~--~~~l~~~~~d~~i~~ 156 (343)
| ...|.+++|+++. +.+++|+.|.+|++||.... +..++..+ .+.|.++.|+|+ ..+|++++.|+++++
T Consensus 104 H-~~dVlsva~s~dn-----~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKv 176 (315)
T KOG0279|consen 104 H-TKDVLSVAFSTDN-----RQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKV 176 (315)
T ss_pred c-CCceEEEEecCCC-----ceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEE
Confidence 9 9999999999999 89999999999999999764 44444433 779999999998 689999999999999
Q ss_pred EEccCCceeEE-EEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcE
Q 019326 157 VNLVRGRRSFY-HKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSI 234 (343)
Q Consensus 157 wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i 234 (343)
||+++.+.... ..+.+.++.++++|||...+.+ .++.+.+||++.++.+..+.+...|.+++|+|+++.++...+..|
T Consensus 177 Wnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~~at~~sI 256 (315)
T KOG0279|consen 177 WNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLCAATATSI 256 (315)
T ss_pred EccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeEeeEEecCCceeEeeccCCce
Confidence 99998775543 3455779999999999999999 999999999999999999999999999999999988888888889
Q ss_pred EEEECCCCceeEEeccc--------ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 235 TAWDTNSGKVAYCIEDA--------HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 235 ~i~d~~~~~~~~~~~~~--------h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
+|||+.++..+.++... ......+++|++++. .|++|-.|+.|++|.+..
T Consensus 257 kIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~---------tLf~g~td~~irv~qv~~ 314 (315)
T KOG0279|consen 257 KIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQ---------TLFAGYTDNVIRVWQVAK 314 (315)
T ss_pred EEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCc---------EEEeeecCCcEEEEEeec
Confidence 99999999887766521 123456778887777 999999999999998863
No 9
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=8.7e-41 Score=246.34 Aligned_cols=266 Identities=16% Similarity=0.247 Sum_probs=230.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe--eeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS--SLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~ 77 (343)
-|+++++|.+||+|...+ ..+.++++-..+.|+.|... +..||+++. ..||+||+.+++ ++..
T Consensus 12 iLvsA~YDhTIRfWqa~t------------G~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t 78 (311)
T KOG0315|consen 12 ILVSAGYDHTIRFWQALT------------GICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVAT 78 (311)
T ss_pred EEEeccCcceeeeeehhc------------CeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeE
Confidence 489999999999999988 57788888677889999998 677777775 569999999875 5888
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEE
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMV 157 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~w 157 (343)
|.+| ...|+++.|..++ +.+++|++||+++|||++...+.+.++ |..+|+++..+|+...|+++..+|.|++|
T Consensus 79 ~e~h-~kNVtaVgF~~dg-----rWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvW 151 (311)
T KOG0315|consen 79 FEGH-TKNVTAVGFQCDG-----RWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVW 151 (311)
T ss_pred Eecc-CCceEEEEEeecC-----eEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEE
Confidence 9999 9999999999999 899999999999999999976666666 78999999999999999999999999999
Q ss_pred EccCCceeEEE--EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccce------eEEEec-CCcceEEeeecC-CCeEE
Q 019326 158 NLVRGRRSFYH--KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAK------LLCELD-GKKRILCAAPGE-NGVLF 226 (343)
Q Consensus 158 d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~------~~~~~~-~~~~i~~~~~~~-~~~l~ 226 (343)
|+.+..+.... +....+..+...|+|..++.+ ..|.+++|++.+.. ++.+++ |...+..+.+++ +++|+
T Consensus 152 Dl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~la 231 (311)
T KOG0315|consen 152 DLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLA 231 (311)
T ss_pred EccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEE
Confidence 99987654433 334678899999999999999 99999999997754 333444 778888888885 67999
Q ss_pred EEeCCCcEEEEECCCC-ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcccc
Q 019326 227 TGGEDRSITAWDTNSG-KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKE 297 (343)
Q Consensus 227 ~~~~dg~i~i~d~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 297 (343)
+++.|.+++||+..+. +....+. +|...++..+|+.++. ||+||+.|+.+++|++..++..
T Consensus 232 t~ssdktv~iwn~~~~~kle~~l~-gh~rWvWdc~FS~dg~---------YlvTassd~~~rlW~~~~~k~v 293 (311)
T KOG0315|consen 232 TCSSDKTVKIWNTDDFFKLELVLT-GHQRWVWDCAFSADGE---------YLVTASSDHTARLWDLSAGKEV 293 (311)
T ss_pred eecCCceEEEEecCCceeeEEEee-cCCceEEeeeeccCcc---------EEEecCCCCceeecccccCcee
Confidence 9999999999999987 5556667 9999999999999988 9999999999999999988633
No 10
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.1e-39 Score=245.82 Aligned_cols=287 Identities=15% Similarity=0.135 Sum_probs=252.3
Q ss_pred ceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEe
Q 019326 29 TLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFST 106 (343)
Q Consensus 29 ~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~ 106 (343)
...++..+.++||.+.|.++.|+ .+++++++.||.+.|||.-+...++.+.-. ...|..++|+|.+ ++++.|
T Consensus 42 ~i~~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~-s~WVMtCA~sPSg-----~~VAcG 115 (343)
T KOG0286|consen 42 RIQMRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLP-SSWVMTCAYSPSG-----NFVACG 115 (343)
T ss_pred eeeeeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecC-ceeEEEEEECCCC-----CeEEec
Confidence 34566678999999999999999 889999999999999999999888888888 8999999999999 899999
Q ss_pred eCCCeEEEEECCCc------ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEE
Q 019326 107 SADGFVSIFDADPF------VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKF 179 (343)
Q Consensus 107 ~~dg~i~iwd~~~~------~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~ 179 (343)
+.|+...||++.+. +..+.+.+|.+.+.++.|.+| ..|++++.|.++.+||+++++.+..+. +...|.++.+
T Consensus 116 GLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl 194 (343)
T KOG0286|consen 116 GLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSL 194 (343)
T ss_pred CcCceeEEEecccccccccceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccceEEEEecCCcccEEEEec
Confidence 99999999999754 355678899999999999985 579999999999999999999877654 5588999999
Q ss_pred eC-CCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecc-cccc
Q 019326 180 DG-SGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIED-AHSA 254 (343)
Q Consensus 180 ~~-~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~h~~ 254 (343)
+| +++.++++ .|...++||++.+...+.|. |...|+++.|.| +.-+++|++|++.++||++..+.+..+.. .-..
T Consensus 195 ~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~ 274 (343)
T KOG0286|consen 195 SPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIIC 274 (343)
T ss_pred CCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccC
Confidence 99 89999999 99999999999999999998 889999999995 56899999999999999999998888871 1235
Q ss_pred cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCC
Q 019326 255 RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKG 334 (343)
Q Consensus 255 ~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~ 334 (343)
+|++++|+..++ +|++|..|.++.+||.-.++... .-..+..+|.|+..+|||.-+..++-|..++.
T Consensus 275 gitSv~FS~SGR---------lLfagy~d~~c~vWDtlk~e~vg----~L~GHeNRvScl~~s~DG~av~TgSWDs~lri 341 (343)
T KOG0286|consen 275 GITSVAFSKSGR---------LLFAGYDDFTCNVWDTLKGERVG----VLAGHENRVSCLGVSPDGMAVATGSWDSTLRI 341 (343)
T ss_pred CceeEEEccccc---------EEEeeecCCceeEeeccccceEE----EeeccCCeeEEEEECCCCcEEEecchhHheee
Confidence 899999999988 99999999999999998764222 12356778999999999999999988877664
Q ss_pred c
Q 019326 335 E 335 (343)
Q Consensus 335 ~ 335 (343)
+
T Consensus 342 W 342 (343)
T KOG0286|consen 342 W 342 (343)
T ss_pred c
Confidence 3
No 11
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=8.6e-41 Score=258.45 Aligned_cols=291 Identities=18% Similarity=0.215 Sum_probs=256.3
Q ss_pred eeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC
Q 019326 31 TLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA 108 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~ 108 (343)
+.+....+.+|.++|.|+++. +.+|++|+.|++|+|||+.++++..++.+| -..|..+++++.. .++++++.
T Consensus 140 pwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGh-i~~vr~vavS~rH-----pYlFs~ge 213 (460)
T KOG0285|consen 140 PWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGH-IETVRGVAVSKRH-----PYLFSAGE 213 (460)
T ss_pred cceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecch-hheeeeeeecccC-----ceEEEecC
Confidence 455667788999999999999 789999999999999999999999999999 9999999999988 89999999
Q ss_pred CCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEE
Q 019326 109 DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 109 dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 187 (343)
|+.|+.||++..+.++.+.+|-..|.+++.+|.-..|++|+.|.++++||+++...+.... +..+|..+.+.|-+..++
T Consensus 214 dk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvi 293 (460)
T KOG0285|consen 214 DKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVI 293 (460)
T ss_pred CCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceE
Confidence 9999999999999999999999999999999999999999999999999999998877666 678999999999999999
Q ss_pred EE-eCCcEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecC
Q 019326 188 MV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKN 265 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~ 265 (343)
++ .|++|++||++.++....+. |...+.+++.++..++++.+....|+-|++..|..+..+. +|..-|+++....++
T Consensus 294 t~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~nls-gh~~iintl~~nsD~ 372 (460)
T KOG0285|consen 294 TGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLS-GHNAIINTLSVNSDG 372 (460)
T ss_pred EecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCccchhhccc-cccceeeeeeeccCc
Confidence 99 99999999999999988887 7788999999976544444444569999999999999988 999999999999887
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCC----cccccccccceeEEEcCCCCceeccccCCCCCCCcccc
Q 019326 266 DGGSTAENPYLVASASSDGVICVWDVRMAIKEKPL----PLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 266 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~----~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
++++|+..|.|.+||.+++-+.+.. ..........|.+.+|...+.-++.+..|+.++.+++.
T Consensus 373 ----------v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 373 ----------VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred ----------eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence 8999999999999999998543322 11223344568999999999999999999987765543
No 12
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=9e-42 Score=267.87 Aligned_cols=266 Identities=18% Similarity=0.229 Sum_probs=241.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
+|++|+..|...+|+... +.-...++.|..+|.++.|+ +.++++|+.+|.|++|+.. ...+..++
T Consensus 110 RLltgs~SGEFtLWNg~~------------fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpn-mnnVk~~~ 176 (464)
T KOG0284|consen 110 RLLTGSQSGEFTLWNGTS------------FNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPN-MNNVKIIQ 176 (464)
T ss_pred eeEeecccccEEEecCce------------eeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccc-hhhhHHhh
Confidence 799999999999999765 44445567899999999999 8999999999999999976 45566777
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
.|+...|++++|+|+. ..|++++.||+|+|||....+....+.+|.-.|.+++|+|...++++++.|..|++||.
T Consensus 177 ahh~eaIRdlafSpnD-----skF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDp 251 (464)
T KOG0284|consen 177 AHHAEAIRDLAFSPND-----SKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDP 251 (464)
T ss_pred HhhhhhhheeccCCCC-----ceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecC
Confidence 7757999999999988 79999999999999999988888999999999999999999999999999999999999
Q ss_pred cCCceeEEE-EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC--CCeEEEEeCCCcE
Q 019326 160 VRGRRSFYH-KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE--NGVLFTGGEDRSI 234 (343)
Q Consensus 160 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~--~~~l~~~~~dg~i 234 (343)
+++.++... .+...|..+.|++++++|+++ .|..+++||+++.+.+..++ |...++++.|++ .++|.+|+.||.|
T Consensus 252 rSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsv 331 (464)
T KOG0284|consen 252 RSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSV 331 (464)
T ss_pred CCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCce
Confidence 999987654 556889999999999999999 99999999999888888888 899999999994 6799999999999
Q ss_pred EEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 235 TAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 235 ~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
..|.+...+++..+..+|...|++++|+|-+. +|++|+.|.++++|.-..+
T Consensus 332 vh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGh---------il~tgsnd~t~rfw~r~rp 382 (464)
T KOG0284|consen 332 VHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGH---------ILATGSNDRTVRFWTRNRP 382 (464)
T ss_pred EEEeccccccccCCCcccccceeeeeccccce---------eEeecCCCcceeeeccCCC
Confidence 99999988888888889999999999999987 9999999999999976543
No 13
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=1.3e-39 Score=251.99 Aligned_cols=265 Identities=18% Similarity=0.229 Sum_probs=240.9
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
+++|+.|++|+|||+.+ .+...++.||...|..++++ -.+|++++.|+.|+.||++..+.++.+.+
T Consensus 166 f~tgs~DrtikIwDlat------------g~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhG 233 (460)
T KOG0285|consen 166 FATGSADRTIKIWDLAT------------GQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHG 233 (460)
T ss_pred EEecCCCceeEEEEccc------------CeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhcc
Confidence 78999999999999998 56778889999999999999 78999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
| -+.|.|++.+|.. ..|++|+.|.++++||+++...+..+.+|..+|.++.+.|....+++|+.|++|++||++
T Consensus 234 H-lS~V~~L~lhPTl-----dvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~ 307 (460)
T KOG0285|consen 234 H-LSGVYCLDLHPTL-----DVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLR 307 (460)
T ss_pred c-cceeEEEeccccc-----eeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeec
Confidence 9 9999999999998 899999999999999999999999999999999999999988899999999999999999
Q ss_pred CCceeEEEE-cCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEE
Q 019326 161 RGRRSFYHK-IGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWD 238 (343)
Q Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d 238 (343)
.++...... +...+.+++.+|....|++++...++-|++..+..+..+. |...+++++...++++++|+++|.+..||
T Consensus 308 agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwd 387 (460)
T KOG0285|consen 308 AGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWD 387 (460)
T ss_pred cCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCccchhhccccccceeeeeeeccCceEEEcCCceEEEEEe
Confidence 998766554 4578999999999999999999999999999999888877 77889999998889999999999999999
Q ss_pred CCCCceeEEecc-------cccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 239 TNSGKVAYCIED-------AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 239 ~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.+++...+.... .....|.+.+|...+. .|++|..|.+|++|.-+..
T Consensus 388 wksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~---------rlit~eadKtIk~~keDe~ 441 (460)
T KOG0285|consen 388 WKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGS---------RLITGEADKTIKMYKEDEH 441 (460)
T ss_pred cCcCcccccccccccCCccccccceeEEeecccCc---------eEEeccCCcceEEEecccc
Confidence 999876655420 1345788888888887 9999999999999987754
No 14
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5.8e-40 Score=254.18 Aligned_cols=284 Identities=20% Similarity=0.277 Sum_probs=253.3
Q ss_pred EeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCe
Q 019326 34 QLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF 111 (343)
Q Consensus 34 ~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 111 (343)
..+.+.+|..+|+.+-|. -..+++++.|++|++||..++++...+++| ...+..++|+..+ +++++++.|-.
T Consensus 100 l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGH-t~sv~di~~~a~G-----k~l~tcSsDl~ 173 (406)
T KOG0295|consen 100 LVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGH-TDSVFDISFDASG-----KYLATCSSDLS 173 (406)
T ss_pred chhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhcc-ccceeEEEEecCc-----cEEEecCCccc
Confidence 345566899999999999 456778888999999999999999999999 8889999999998 89999999999
Q ss_pred EEEEECCC-cceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-CCcceEEEEeCCCCEEEEE
Q 019326 112 VSIFDADP-FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-GKEASLIKFDGSGEKFFMV 189 (343)
Q Consensus 112 i~iwd~~~-~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 189 (343)
+++||..+ .+++..+.+|...|.+++|-|.|.++++++.|.+|+.|++.++.++..+.. ...+..+..+.||..++++
T Consensus 174 ~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~ 253 (406)
T KOG0295|consen 174 AKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASC 253 (406)
T ss_pred hhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEec
Confidence 99999976 678888999999999999999999999999999999999999998887654 4678999999999999999
Q ss_pred -eCCcEEEEEcccceeEEEec-CCcceEEeeec----------------CCCeEEEEeCCCcEEEEECCCCceeEEeccc
Q 019326 190 -TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG----------------ENGVLFTGGEDRSITAWDTNSGKVAYCIEDA 251 (343)
Q Consensus 190 -~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~----------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 251 (343)
.+..+++|-+.+.++...+. |+.++.|++|. .+.++++++.|++|++||+.++.++.++. +
T Consensus 254 s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~-g 332 (406)
T KOG0295|consen 254 SNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLV-G 332 (406)
T ss_pred CCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEe-c
Confidence 99999999999997777666 67777777763 12489999999999999999999999999 9
Q ss_pred ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCC
Q 019326 252 HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSA 331 (343)
Q Consensus 252 h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~ 331 (343)
|...|.+++|+|.|+ ||+|+.+|+++++||+++..+.+..+ .+...++++++..+..+++.|.-|..
T Consensus 333 hdnwVr~~af~p~Gk---------yi~ScaDDktlrvwdl~~~~cmk~~~----ah~hfvt~lDfh~~~p~VvTGsVdqt 399 (406)
T KOG0295|consen 333 HDNWVRGVAFSPGGK---------YILSCADDKTLRVWDLKNLQCMKTLE----AHEHFVTSLDFHKTAPYVVTGSVDQT 399 (406)
T ss_pred ccceeeeeEEcCCCe---------EEEEEecCCcEEEEEeccceeeeccC----CCcceeEEEecCCCCceEEeccccce
Confidence 999999999999988 99999999999999999987665554 33456999999999999999999999
Q ss_pred CCCccc
Q 019326 332 PKGEEK 337 (343)
Q Consensus 332 ~~~~~~ 337 (343)
.+.++.
T Consensus 400 ~KvwEc 405 (406)
T KOG0295|consen 400 VKVWEC 405 (406)
T ss_pred eeeeec
Confidence 887764
No 15
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=9.8e-39 Score=235.53 Aligned_cols=268 Identities=14% Similarity=0.154 Sum_probs=232.8
Q ss_pred ceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc--eeeeeeecc
Q 019326 53 TAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV--LLTSVKVHK 130 (343)
Q Consensus 53 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~ 130 (343)
-+|++++.|.+||+|...+|.+.++++.. .+.|+.|...|++ +.|++++.- .|++||++++. ++.++.+|.
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~-dsqVNrLeiTpdk-----~~LAaa~~q-hvRlyD~~S~np~Pv~t~e~h~ 83 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHP-DSQVNRLEITPDK-----KDLAAAGNQ-HVRLYDLNSNNPNPVATFEGHT 83 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecC-ccceeeEEEcCCc-----chhhhccCC-eeEEEEccCCCCCceeEEeccC
Confidence 47999999999999999999999999977 8999999999998 677777654 79999997654 689999999
Q ss_pred ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec
Q 019326 131 KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD 209 (343)
Q Consensus 131 ~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~ 209 (343)
..|+++.|..+|+.+++|++||+++|||++...+.+.+.+..+|+++..+|+...|+++ .+|.|++||+.+..+...+-
T Consensus 84 kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~li 163 (311)
T KOG0315|consen 84 KNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELI 163 (311)
T ss_pred CceEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccC
Confidence 99999999999999999999999999999998888888899999999999999999999 99999999999887766665
Q ss_pred --CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCC------ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEE
Q 019326 210 --GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSG------KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASA 280 (343)
Q Consensus 210 --~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 280 (343)
...++.++... ++.+++++...|..++|++-+. +++..++ +|...+..+.++|+.. +|+++
T Consensus 164 Pe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~-ah~~~il~C~lSPd~k---------~lat~ 233 (311)
T KOG0315|consen 164 PEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQ-AHNGHILRCLLSPDVK---------YLATC 233 (311)
T ss_pred CCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhhee-cccceEEEEEECCCCc---------EEEee
Confidence 44678888887 6789999999999999998654 3566777 9999999999999988 99999
Q ss_pred cCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccccCc
Q 019326 281 SSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKASM 340 (343)
Q Consensus 281 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 340 (343)
|.|.+++||+.++.- +...... .+..-+...+||.|+.|++.+..|..++.++.+.-
T Consensus 234 ssdktv~iwn~~~~~--kle~~l~-gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~ 290 (311)
T KOG0315|consen 234 SSDKTVKIWNTDDFF--KLELVLT-GHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAG 290 (311)
T ss_pred cCCceEEEEecCCce--eeEEEee-cCCceEEeeeeccCccEEEecCCCCceeecccccC
Confidence 999999999999761 1111111 22245889999999999999999999998887653
No 16
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=3.5e-38 Score=265.41 Aligned_cols=307 Identities=18% Similarity=0.201 Sum_probs=264.8
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCC-CeEEEEEcCCCeeeeEec
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTD-DTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~d-g~i~iwd~~~~~~~~~~~ 79 (343)
||+|=..|...+|++.. +..++.+.-...+|..++|+ |+++|.|+.. |++.||+.++...+-..+
T Consensus 280 lvvgFssG~f~LyelP~------------f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQ 347 (893)
T KOG0291|consen 280 LVVGFSSGEFGLYELPD------------FNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQ 347 (893)
T ss_pred EEEEecCCeeEEEecCC------------ceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeecc
Confidence 67888889999999987 67788887778899999999 9999998765 899999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
+| ...+++++++|++ +++++|+.||.|+|||...+-|..++..|+..|+.+.|+..++.+++.+.||+|+.||+
T Consensus 348 gH-~~~i~~l~YSpDg-----q~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDl 421 (893)
T KOG0291|consen 348 GH-SDRITSLAYSPDG-----QLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDL 421 (893)
T ss_pred cc-ccceeeEEECCCC-----cEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeee
Confidence 99 9999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeEEEEcCCc--ceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCc
Q 019326 160 VRGRRSFYHKIGKE--ASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRS 233 (343)
Q Consensus 160 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~ 233 (343)
...+..+.+..+.+ ..+++..|.|..++++ ..-.|.+|++++|+.+..+. |.+||.+++|+ .+..|++++.|.+
T Consensus 422 kRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkT 501 (893)
T KOG0291|consen 422 KRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKT 501 (893)
T ss_pred cccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccce
Confidence 99888777766654 5678889999999988 45579999999999999998 89999999998 4679999999999
Q ss_pred EEEEECCCC-ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCC------------
Q 019326 234 ITAWDTNSG-KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPL------------ 300 (343)
Q Consensus 234 i~i~d~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~------------ 300 (343)
|++||+-.. ..+.++. +...+.+++|.|++. .|+.+..||.|.+||++.......+
T Consensus 502 VRiW~if~s~~~vEtl~--i~sdvl~vsfrPdG~---------elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~ 570 (893)
T KOG0291|consen 502 VRIWDIFSSSGTVETLE--IRSDVLAVSFRPDGK---------ELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKE 570 (893)
T ss_pred EEEEEeeccCceeeeEe--eccceeEEEEcCCCC---------eEEEEEecceEEEEEhhhceeeccccchhhccccccc
Confidence 999998644 3556666 888999999999998 9999999999999999876322110
Q ss_pred ----cccccccccceeEEEcCCCCceeccccCCCCCCCcccc
Q 019326 301 ----PLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 301 ----~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
..........++.+++|.||.+++++...+.+...+.+
T Consensus 571 ~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~ 612 (893)
T KOG0291|consen 571 TDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVP 612 (893)
T ss_pred cceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECc
Confidence 01111223468999999999999999988866554443
No 17
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.7e-39 Score=251.58 Aligned_cols=261 Identities=16% Similarity=0.226 Sum_probs=237.3
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCC-CeeeeEec
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLST-SSSLGAIH 79 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~-~~~~~~~~ 79 (343)
+++++.|++|++||..+ .+....++||.+.|..++|+ |.++++++.|-.+++||.++ .++++.+.
T Consensus 123 v~~as~d~tikv~D~~t------------g~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~ 190 (406)
T KOG0295|consen 123 VVSASEDATIKVFDTET------------GELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLI 190 (406)
T ss_pred EEEecCCceEEEEEccc------------hhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhc
Confidence 56777899999999988 44578889999999999999 99999999999999999987 57788888
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
+| ...|.++.|.|.+ .++++++.|.+|+.|++.++.++.++.+|...|..++.+.||..+++++.|.++++|-+
T Consensus 191 gh-~h~vS~V~f~P~g-----d~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~ 264 (406)
T KOG0295|consen 191 GH-EHGVSSVFFLPLG-----DHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVV 264 (406)
T ss_pred Cc-ccceeeEEEEecC-----CeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEe
Confidence 89 8999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeEE-EEcCCcceEEEEeCC---------------CCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC
Q 019326 160 VRGRRSFY-HKIGKEASLIKFDGS---------------GEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE 221 (343)
Q Consensus 160 ~~~~~~~~-~~~~~~~~~~~~~~~---------------~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~ 221 (343)
.++++... ..+..++.+++|.|. ++++..+ .|+.|++||+.++.++.++. |...|..++|++
T Consensus 265 ~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p 344 (406)
T KOG0295|consen 265 ATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSP 344 (406)
T ss_pred ccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcC
Confidence 99865443 345677888888652 2466666 89999999999999999988 888999999995
Q ss_pred -CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 222 -NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 222 -~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
|+||+++.+|+++++||+++++++..++ +|..-|+++.|+.+.. +++||+-|.++++|.-
T Consensus 345 ~Gkyi~ScaDDktlrvwdl~~~~cmk~~~-ah~hfvt~lDfh~~~p---------~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 345 GGKYILSCADDKTLRVWDLKNLQCMKTLE-AHEHFVTSLDFHKTAP---------YVVTGSVDQTVKVWEC 405 (406)
T ss_pred CCeEEEEEecCCcEEEEEeccceeeeccC-CCcceeEEEecCCCCc---------eEEeccccceeeeeec
Confidence 6799999999999999999999999999 9999999999999988 9999999999999974
No 18
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=1.4e-38 Score=246.66 Aligned_cols=302 Identities=17% Similarity=0.154 Sum_probs=258.1
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
+++|+.|..-++|++.+ ......+.+|+..|+++.|+ |.+||||+.+|.|+||...++.....+..
T Consensus 79 ~aTGGgDD~AflW~~~~------------ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~ 146 (399)
T KOG0296|consen 79 VATGGGDDLAFLWDIST------------GEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQ 146 (399)
T ss_pred EEecCCCceEEEEEccC------------CcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeec
Confidence 68999999999999988 23566778999999999999 99999999999999999999999888875
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
. -..|.=+.|+|.. ..|++|+.||.+.+|.+......+.+.+|..++++=.|.|+|+.++++..||+|++||+.
T Consensus 147 e-~~dieWl~WHp~a-----~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~k 220 (399)
T KOG0296|consen 147 E-VEDIEWLKWHPRA-----HILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPK 220 (399)
T ss_pred c-cCceEEEEecccc-----cEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecC
Confidence 5 6788889999988 799999999999999999888889999999999999999999999999999999999999
Q ss_pred CCceeEEEEc--CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecC---------CcceEEeeec----CCCe
Q 019326 161 RGRRSFYHKI--GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG---------KKRILCAAPG----ENGV 224 (343)
Q Consensus 161 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~---------~~~i~~~~~~----~~~~ 224 (343)
++++...... .....++.++..+..++.+ .++.+.+.+..+++.+..... ...+.|+.+. .=.+
T Consensus 221 tg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL 300 (399)
T KOG0296|consen 221 TGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPL 300 (399)
T ss_pred CCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccch
Confidence 9998776653 3456778888888888888 888888888888887766552 2334444443 2358
Q ss_pred EEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccc
Q 019326 225 LFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAE 304 (343)
Q Consensus 225 l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 304 (343)
.++|+.||+|.|||+...+...... |..+|..+.|.+ .. +|++++.||.|+.||.+++.... .-
T Consensus 301 ~A~G~vdG~i~iyD~a~~~~R~~c~--he~~V~~l~w~~-t~---------~l~t~c~~g~v~~wDaRtG~l~~----~y 364 (399)
T KOG0296|consen 301 AACGSVDGTIAIYDLAASTLRHICE--HEDGVTKLKWLN-TD---------YLLTACANGKVRQWDARTGQLKF----TY 364 (399)
T ss_pred hhcccccceEEEEecccchhheecc--CCCceEEEEEcC-cc---------hheeeccCceEEeeeccccceEE----EE
Confidence 8899999999999999887766666 999999999999 44 89999999999999999985221 12
Q ss_pred cccccceeEEEcCCCCceeccccCCCCCCCcccc
Q 019326 305 AKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 305 ~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
..+...|.+++.+|++++++..+.|+..++++.+
T Consensus 365 ~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 365 TGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 2455679999999999999999999999888765
No 19
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=8.5e-38 Score=253.04 Aligned_cols=302 Identities=22% Similarity=0.284 Sum_probs=248.3
Q ss_pred CeeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 1 ~~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
||+++|+.|+.|-+|+-.+ ++-..+++.|..-|.|+.|+ |+++++++.||+|.+||-.+++.+..+
T Consensus 161 fRi~T~sdDn~v~ffeGPP------------FKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l 228 (603)
T KOG0318|consen 161 FRIATGSDDNTVAFFEGPP------------FKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGEL 228 (603)
T ss_pred eEEEeccCCCeEEEeeCCC------------eeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEe
Confidence 6899999999999998544 55556778899999999999 999999999999999999999999999
Q ss_pred c---cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcce---------------------------------
Q 019326 79 H---HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL--------------------------------- 122 (343)
Q Consensus 79 ~---~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--------------------------------- 122 (343)
. +| .+.|.+|+|+|++ +.+++++.|.+++|||+.+.++
T Consensus 229 ~~~~aH-kGsIfalsWsPDs-----~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~i 302 (603)
T KOG0318|consen 229 EDSDAH-KGSIFALSWSPDS-----TQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTI 302 (603)
T ss_pred cCCCCc-cccEEEEEECCCC-----ceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEE
Confidence 7 78 9999999999999 8999999999999999864433
Q ss_pred ----------eeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEE-------------------------
Q 019326 123 ----------LTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFY------------------------- 167 (343)
Q Consensus 123 ----------~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~------------------------- 167 (343)
+..+.+|...|+++..+|++++|++|+.||.|.-|+..++..-..
T Consensus 303 n~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~ 382 (603)
T KOG0318|consen 303 NYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGW 382 (603)
T ss_pred EEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEec
Confidence 344557889999999999999999999999999999865431100
Q ss_pred ------E-------------Ec--------------------------------------CCcceEEEEeCCCCEEEEE-
Q 019326 168 ------H-------------KI--------------------------------------GKEASLIKFDGSGEKFFMV- 189 (343)
Q Consensus 168 ------~-------------~~--------------------------------------~~~~~~~~~~~~~~~~~~~- 189 (343)
. ++ .-...+++++|++..++++
T Consensus 383 Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG 462 (603)
T KOG0318|consen 383 DDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGG 462 (603)
T ss_pred CCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEec
Confidence 0 00 0112567889999999999
Q ss_pred eCCcEEEEEcccceeE---EEecCCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecC
Q 019326 190 TEEKVGIHQAEDAKLL---CELDGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKN 265 (343)
Q Consensus 190 ~~~~i~~~d~~~~~~~---~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~ 265 (343)
.|+.+.+|.+...... ..+.|..+++++++++ +.+|++|...+.+.+||..+.+.......-|...|.+++|+|++
T Consensus 463 ~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n 542 (603)
T KOG0318|consen 463 QDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNN 542 (603)
T ss_pred ccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCc
Confidence 9999999999875533 4456999999999995 67999999999999999998887544443599999999999998
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCC
Q 019326 266 DGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPK 333 (343)
Q Consensus 266 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~ 333 (343)
. ++||||.|-.|.||+++.+.+- +.+...+..+ |+.++|-.+..++..+ .|-..+
T Consensus 543 ~---------~vATGSlDt~Viiysv~kP~~~--i~iknAH~~g-Vn~v~wlde~tvvSsG-~Da~iK 597 (603)
T KOG0318|consen 543 K---------LVATGSLDTNVIIYSVKKPAKH--IIIKNAHLGG-VNSVAWLDESTVVSSG-QDANIK 597 (603)
T ss_pred e---------EEEeccccceEEEEEccChhhh--eEeccccccC-ceeEEEecCceEEecc-CcceeE
Confidence 8 9999999999999999987533 4444555555 9999998777665444 343333
No 20
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=2.4e-38 Score=252.90 Aligned_cols=308 Identities=16% Similarity=0.217 Sum_probs=258.7
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecC----CCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPA----HLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLG 76 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~ 76 (343)
|++|+.|-..++|++...... -.....++....+.+ ....|++|+|+ |+.||+|+.||.+++|+.. |.++.
T Consensus 194 lasg~~~s~ari~~l~e~~~~--~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~-G~l~~ 270 (524)
T KOG0273|consen 194 LASGSGDSTARIWNLLENSNI--GSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNKD-GNLIS 270 (524)
T ss_pred hhccCCccceeeeeehhhccc--cchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecCcEEEEEecC-chhhh
Confidence 678888889999998640000 001111111111112 23579999999 9999999999999999976 77888
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEE
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAM 156 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~ 156 (343)
.+..| .++|.+|.|+..+ .+|++++.|+++.+||..+++..+.+..|..+-.++.|-.+ ..+++.+.|+.|++
T Consensus 271 tl~~H-kgPI~slKWnk~G-----~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V 343 (524)
T KOG0273|consen 271 TLGQH-KGPIFSLKWNKKG-----TYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSN-DEFATSSTDGCIHV 343 (524)
T ss_pred hhhcc-CCceEEEEEcCCC-----CEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecC-ceEeecCCCceEEE
Confidence 99999 9999999999999 89999999999999999999999999999988788888765 47899999999999
Q ss_pred EEccCCceeEEE-EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC----------CC
Q 019326 157 VNLVRGRRSFYH-KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE----------NG 223 (343)
Q Consensus 157 wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~----------~~ 223 (343)
+.+....++..+ .+..+|.++.|+|.+.+|+++ .|+++++|..........+. |...|..+.|++ +.
T Consensus 344 ~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~ 423 (524)
T KOG0273|consen 344 CKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNL 423 (524)
T ss_pred EEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCc
Confidence 999877766544 466899999999999999999 99999999998888888777 788888888872 23
Q ss_pred eEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccc
Q 019326 224 VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLA 303 (343)
Q Consensus 224 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 303 (343)
.+++++.|++|++||+..+.++..+. .|..+|.+++|+|++. ++|+|+.||.|.+|+.++++ .+.
T Consensus 424 ~l~sas~dstV~lwdv~~gv~i~~f~-kH~~pVysvafS~~g~---------ylAsGs~dg~V~iws~~~~~-----l~~ 488 (524)
T KOG0273|consen 424 MLASASFDSTVKLWDVESGVPIHTLM-KHQEPVYSVAFSPNGR---------YLASGSLDGCVHIWSTKTGK-----LVK 488 (524)
T ss_pred eEEEeecCCeEEEEEccCCceeEeec-cCCCceEEEEecCCCc---------EEEecCCCCeeEeccccchh-----eeE
Confidence 78999999999999999999999998 8999999999999998 99999999999999999875 444
Q ss_pred ccccccceeEEEcCCCCceeccccCCCCCCCc
Q 019326 304 EAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 304 ~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~ 335 (343)
.+...+.|..++|+.++.++.....|+.+...
T Consensus 489 s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvl 520 (524)
T KOG0273|consen 489 SYQGTGGIFELCWNAAGDKLGACASDGSVCVL 520 (524)
T ss_pred eecCCCeEEEEEEcCCCCEEEEEecCCCceEE
Confidence 56666679999999999999998888876543
No 21
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=4.8e-40 Score=253.72 Aligned_cols=256 Identities=18% Similarity=0.264 Sum_probs=224.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHH 81 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 81 (343)
.+++|..|++|+|||... ......+.||++.|.|+.|....+++|+.|.+|++||+++++++..+-.|
T Consensus 209 kiVSGlrDnTikiWD~n~------------~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihH 276 (499)
T KOG0281|consen 209 KIVSGLRDNTIKIWDKNS------------LECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHH 276 (499)
T ss_pred hhhcccccCceEEecccc------------HHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhh
Confidence 478999999999999987 67778888999999999999999999999999999999999999999988
Q ss_pred CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc---eeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 82 ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV---LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 82 ~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
...|..+.|+. .++++++.|.++.+||+.... +.+.+.+|...|+.+.|+. +++++++.|.+|++|+
T Consensus 277 -ceaVLhlrf~n-------g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~--kyIVsASgDRTikvW~ 346 (499)
T KOG0281|consen 277 -CEAVLHLRFSN-------GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWS 346 (499)
T ss_pred -cceeEEEEEeC-------CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc--ceEEEecCCceEEEEe
Confidence 99999999984 389999999999999996543 5567789999999999974 5999999999999999
Q ss_pred ccCCceeEEEEc-CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEE
Q 019326 159 LVRGRRSFYHKI-GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSIT 235 (343)
Q Consensus 159 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~ 235 (343)
+.+++.+..... ...+.|+.+ .+++++++ +|.+|++||+..|.+++.++ |+.-|.|+.| +++.+++|+.||+|+
T Consensus 347 ~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF-d~krIVSGaYDGkik 423 (499)
T KOG0281|consen 347 TSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIK 423 (499)
T ss_pred ccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee-cCceeeeccccceEE
Confidence 999987766543 345555554 67888888 99999999999999999998 6777999999 778899999999999
Q ss_pred EEECCCCce---------eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 236 AWDTNSGKV---------AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 236 i~d~~~~~~---------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
+||+..+.. +..+. .|++.|..+.|... .+++++.|.+|.|||..++
T Consensus 424 vWdl~aaldpra~~~~~Cl~~lv-~hsgRVFrLQFD~f-----------qIvsssHddtILiWdFl~~ 479 (499)
T KOG0281|consen 424 VWDLQAALDPRAPASTLCLRTLV-EHSGRVFRLQFDEF-----------QIISSSHDDTILIWDFLNG 479 (499)
T ss_pred EEecccccCCcccccchHHHhhh-hccceeEEEeecce-----------EEEeccCCCeEEEEEcCCC
Confidence 999987643 23444 68999999999765 8999999999999999876
No 22
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=6.7e-38 Score=265.19 Aligned_cols=248 Identities=18% Similarity=0.259 Sum_probs=224.2
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC-------------------------------eeeeEe
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS-------------------------------SSLGAI 78 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~-------------------------------~~~~~~ 78 (343)
-.+..++......++|..|+ +.+||.|..|..|++|.+... .....+
T Consensus 368 Sic~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L 447 (707)
T KOG0263|consen 368 SICMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTL 447 (707)
T ss_pred cEEEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEe
Confidence 34555555556789999999 778999999999999998721 122346
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
.+| .++|..+.|+|+. ++|++++.|+++++|.+.+..++-.+++|..+|+.+.|+|.|-++++++.|++.++|.
T Consensus 448 ~GH-~GPVyg~sFsPd~-----rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs 521 (707)
T KOG0263|consen 448 YGH-SGPVYGCSFSPDR-----RFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWS 521 (707)
T ss_pred ecC-CCceeeeeecccc-----cceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeee
Confidence 788 9999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcE
Q 019326 159 LVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSI 234 (343)
Q Consensus 159 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i 234 (343)
.....+.+.+. +-..+.|+.|+|+..+++++ .|.++++||..+|..++.+. |..+|.+++++ .+.+|++|+.||.|
T Consensus 522 ~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I 601 (707)
T KOG0263|consen 522 TDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLI 601 (707)
T ss_pred cccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcE
Confidence 98877766554 44889999999999999999 99999999999999999998 88999999999 57899999999999
Q ss_pred EEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 235 TAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 235 ~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
.+||+.+++++..+. +|.+.|.+|.|+.++. .||+|+.|.+|++||+....
T Consensus 602 ~iWDl~~~~~v~~l~-~Ht~ti~SlsFS~dg~---------vLasgg~DnsV~lWD~~~~~ 652 (707)
T KOG0263|consen 602 KIWDLANGSLVKQLK-GHTGTIYSLSFSRDGN---------VLASGGADNSVRLWDLTKVI 652 (707)
T ss_pred EEEEcCCCcchhhhh-cccCceeEEEEecCCC---------EEEecCCCCeEEEEEchhhc
Confidence 999999999999999 9999999999999988 99999999999999997653
No 23
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=2.2e-37 Score=247.43 Aligned_cols=260 Identities=20% Similarity=0.292 Sum_probs=234.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.||+|+.||.+++|+... ..+.++..|++||.+|.|+ |++|++++.|+++.+||..++.....+.
T Consensus 249 ~LatG~~~G~~riw~~~G-------------~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~ 315 (524)
T KOG0273|consen 249 LLATGSEDGEARIWNKDG-------------NLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFE 315 (524)
T ss_pred eEEEeecCcEEEEEecCc-------------hhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeee
Confidence 589999999999999875 4566777899999999999 9999999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
.| ..+-..+.|-.+. .+++.+.|+.|+|+.+....++.++.+|.++|.++.|+|.+.+|++++.|+++++|..
T Consensus 316 ~~-s~~~lDVdW~~~~------~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~ 388 (524)
T KOG0273|consen 316 FH-SAPALDVDWQSND------EFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSM 388 (524)
T ss_pred ec-cCCccceEEecCc------eEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeec
Confidence 88 7776889998776 8999999999999999999999999999999999999999999999999999999997
Q ss_pred cCCceeE-EEEcCCcceEEEEeCCC---------CEEEEE-eCCcEEEEEcccceeEEEe-cCCcceEEeeec-CCCeEE
Q 019326 160 VRGRRSF-YHKIGKEASLIKFDGSG---------EKFFMV-TEEKVGIHQAEDAKLLCEL-DGKKRILCAAPG-ENGVLF 226 (343)
Q Consensus 160 ~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~i~~~d~~~~~~~~~~-~~~~~i~~~~~~-~~~~l~ 226 (343)
....... ...+...|..+.|+|.+ ..++.+ .|+.+++||+..+.++..+ +|..+|.+++|+ ++.+++
T Consensus 389 ~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylA 468 (524)
T KOG0273|consen 389 GQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLA 468 (524)
T ss_pred CCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEE
Confidence 7665443 44556788889998854 355666 9999999999999999999 599999999999 568999
Q ss_pred EEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 227 TGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 227 ~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+|+.||.|.+|+.++++.++++. -...|..++|+..++ .|..+-.|+.+++-|++
T Consensus 469 sGs~dg~V~iws~~~~~l~~s~~--~~~~Ifel~Wn~~G~---------kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 469 SGSLDGCVHIWSTKTGKLVKSYQ--GTGGIFELCWNAAGD---------KLGACASDGSVCVLDLR 523 (524)
T ss_pred ecCCCCeeEeccccchheeEeec--CCCeEEEEEEcCCCC---------EEEEEecCCCceEEEec
Confidence 99999999999999999999998 566799999999987 89999999999999986
No 24
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.2e-37 Score=227.99 Aligned_cols=284 Identities=14% Similarity=0.141 Sum_probs=234.1
Q ss_pred eeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC
Q 019326 31 TLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA 108 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~ 108 (343)
+.+....+..|+++|..+.|+ |++.++++.|.+|++|+...+.+++++.+| ...|..++.+.++ ..|++|+.
T Consensus 6 ptkr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsgh-G~EVlD~~~s~Dn-----skf~s~Gg 79 (307)
T KOG0316|consen 6 PTKRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGH-GHEVLDAALSSDN-----SKFASCGG 79 (307)
T ss_pred cchhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCC-Cceeeeccccccc-----cccccCCC
Confidence 345667778999999999999 999999999999999999999999999999 9999999999888 79999999
Q ss_pred CCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc---CCcceEEEEeCCCCE
Q 019326 109 DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI---GKEASLIKFDGSGEK 185 (343)
Q Consensus 109 dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 185 (343)
|..+.+||+.+++.++.+++|.+.|+.+.|+.+...+++|+.|.++++||.++......+.+ ...+.++.+ .+..
T Consensus 80 Dk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v--~~he 157 (307)
T KOG0316|consen 80 DKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV--AEHE 157 (307)
T ss_pred CceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEe--cccE
Confidence 99999999999999999999999999999999999999999999999999998764443333 245555555 4567
Q ss_pred EEEE-eCCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEE--EE
Q 019326 186 FFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGI--VV 261 (343)
Q Consensus 186 ~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~--~~ 261 (343)
++++ .||+++.||++.++..... ...+|+|++|+ +++..++++.|+++++.|-.+|+.+..+. +|...-..+ ++
T Consensus 158 IvaGS~DGtvRtydiR~G~l~sDy-~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYk-Ghkn~eykldc~l 235 (307)
T KOG0316|consen 158 IVAGSVDGTVRTYDIRKGTLSSDY-FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYK-GHKNMEYKLDCCL 235 (307)
T ss_pred EEeeccCCcEEEEEeecceeehhh-cCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhc-ccccceeeeeeee
Confidence 7777 9999999999998876543 45789999999 57899999999999999999999999999 998765544 34
Q ss_pred EecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCcc
Q 019326 262 LTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEE 336 (343)
Q Consensus 262 ~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~ 336 (343)
+.... .+++||+||.|++||+.........+ ....-.+..+++.|...-+..+.+.+...+..
T Consensus 236 ~qsdt---------hV~sgSEDG~Vy~wdLvd~~~~sk~~---~~~~v~v~dl~~hp~~~~f~~A~~~~~~~~~~ 298 (307)
T KOG0316|consen 236 NQSDT---------HVFSGSEDGKVYFWDLVDETQISKLS---VVSTVIVTDLSCHPTMDDFITATGHGDLFWYQ 298 (307)
T ss_pred cccce---------eEEeccCCceEEEEEeccceeeeeec---cCCceeEEeeecccCccceeEecCCceeceee
Confidence 44444 99999999999999999864222111 12222378899999876555555555544433
No 25
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=1e-38 Score=255.80 Aligned_cols=263 Identities=16% Similarity=0.212 Sum_probs=232.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++++.|+.|+||++.. ...+++++.+|..+|..++|+ |..|++++.|+.|++||+++|+++..+.
T Consensus 229 LlLS~gmD~~vklW~vy~-----------~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~ 297 (503)
T KOG0282|consen 229 LLLSGGMDGLVKLWNVYD-----------DRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFH 297 (503)
T ss_pred EEEecCCCceEEEEEEec-----------CcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEe
Confidence 378999999999999976 257889999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
.. ..++|+.|+|++ ++.+++|+.|+.|+.||+++++.++++..|-+.|..+.|-++++++++.+.|+++++|+.
T Consensus 298 ~~--~~~~cvkf~pd~----~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~ 371 (503)
T KOG0282|consen 298 LD--KVPTCVKFHPDN----QNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWEN 371 (503)
T ss_pred cC--CCceeeecCCCC----CcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEc
Confidence 65 789999999998 479999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeEEEEc--CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeE---EEec---CCcceEEeeec-CCCeEEEEe
Q 019326 160 VRGRRSFYHKI--GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLL---CELD---GKKRILCAAPG-ENGVLFTGG 229 (343)
Q Consensus 160 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~---~~~~---~~~~i~~~~~~-~~~~l~~~~ 229 (343)
+....+..... .....++..+|+++++++- .++.+.+|.+...-.. +.+. -.+.-..+.|+ ++++|++|+
T Consensus 372 ~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGd 451 (503)
T KOG0282|consen 372 RIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGD 451 (503)
T ss_pred CCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeec
Confidence 98876654443 3667889999999999998 8999999986542221 1222 23556677788 578999999
Q ss_pred CCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 230 EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 230 ~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
.||.+.+||.++-+.+..+. +|..++..+.|+|...+ .+||++.||.|++|+
T Consensus 452 sdG~v~~wdwkt~kl~~~lk-ah~~~ci~v~wHP~e~S--------kvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 452 SDGKVNFWDWKTTKLVSKLK-AHDQPCIGVDWHPVEPS--------KVATCGWDGLIKIWD 503 (503)
T ss_pred CCccEEEeechhhhhhhccc-cCCcceEEEEecCCCcc--------eeEecccCceeEecC
Confidence 99999999999999999999 99999999999998774 799999999999996
No 26
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=1.4e-36 Score=280.82 Aligned_cols=283 Identities=14% Similarity=0.187 Sum_probs=234.6
Q ss_pred ecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC----e----eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee
Q 019326 38 YPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS----S----SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS 107 (343)
Q Consensus 38 ~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~----~----~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~ 107 (343)
+..|.+.|.+++|+ +++|++|+.|+.|++|+..+. . ....+.. ...+.+++|++.. +.+|++++
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~--~~~v~~l~~~~~~----~~~las~~ 552 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELAS--RSKLSGICWNSYI----KSQVASSN 552 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecc--cCceeeEEeccCC----CCEEEEEe
Confidence 45699999999999 889999999999999997542 1 1223333 4689999999864 26899999
Q ss_pred CCCeEEEEECCCcceeeeeeeccccEEEEEEec-CCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEe-CCCCE
Q 019326 108 ADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH-SGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD-GSGEK 185 (343)
Q Consensus 108 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 185 (343)
.||+|++||+.+++.+..+.+|.+.|.+++|+| ++.+|++++.|+.|++||++++..+........+.++.|+ +++..
T Consensus 553 ~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~ 632 (793)
T PLN00181 553 FEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRS 632 (793)
T ss_pred CCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCE
Confidence 999999999999999999999999999999997 6889999999999999999999887777777788899995 56889
Q ss_pred EEEE-eCCcEEEEEcccce-eEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCC------ceeEEecccccccE
Q 019326 186 FFMV-TEEKVGIHQAEDAK-LLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSG------KVAYCIEDAHSARV 256 (343)
Q Consensus 186 ~~~~-~~~~i~~~d~~~~~-~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~h~~~v 256 (343)
++++ .|+.|++||+++.+ ....+. |...|.++.|.++.++++++.|+.|++||++.+ .++..+. +|...+
T Consensus 633 latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~-gh~~~i 711 (793)
T PLN00181 633 LAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFM-GHTNVK 711 (793)
T ss_pred EEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEc-CCCCCe
Confidence 9999 89999999998765 344444 788999999988889999999999999999743 5677888 999999
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccC------CCcc---cccccccceeEEEcCCCCceecccc
Q 019326 257 KGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEK------PLPL---AEAKTNSRLTCLAGSSTKSFKRPQI 327 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~------~~~~---~~~~~~~~i~~~~~s~~~~~~~~~~ 327 (343)
..+++++++. +|++|+.|+.|++|+........ ..+. ........|.+++|++++.+++++.
T Consensus 712 ~~v~~s~~~~---------~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~ 782 (793)
T PLN00181 712 NFVGLSVSDG---------YIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAAN 782 (793)
T ss_pred eEEEEcCCCC---------EEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEec
Confidence 9999999887 99999999999999986542110 0001 0122345699999999999999999
Q ss_pred CCCCCCCcc
Q 019326 328 GDSAPKGEE 336 (343)
Q Consensus 328 ~~~~~~~~~ 336 (343)
.++.++.++
T Consensus 783 ~dG~I~i~~ 791 (793)
T PLN00181 783 STGNIKILE 791 (793)
T ss_pred CCCcEEEEe
Confidence 999887655
No 27
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=1.5e-38 Score=249.78 Aligned_cols=275 Identities=16% Similarity=0.241 Sum_probs=241.9
Q ss_pred CCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC
Q 019326 41 HLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD 118 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 118 (343)
-+.+|..+.|. |+.|++|+..|.+.+|+..+-.....++.| ..+|+++.|++++ .++++|+.+|.|++|+..
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaH-Ds~Vr~m~ws~~g-----~wmiSgD~gG~iKyWqpn 168 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAH-DSPVRTMKWSHNG-----TWMISGDKGGMIKYWQPN 168 (464)
T ss_pred cccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhh-cccceeEEEccCC-----CEEEEcCCCceEEecccc
Confidence 35689999999 899999999999999998766666667888 9999999999999 899999999999999986
Q ss_pred Ccceeeeeeecc-ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEE-EEcCCcceEEEEeCCCCEEEEE-eCCcEE
Q 019326 119 PFVLLTSVKVHK-KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFY-HKIGKEASLIKFDGSGEKFFMV-TEEKVG 195 (343)
Q Consensus 119 ~~~~~~~~~~~~-~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~i~ 195 (343)
. ..+..+..|. ..|++++|+|+...+++++.||+|+|||....+.... ..++-.+.++.|+|....++++ .|+.|+
T Consensus 169 m-nnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVK 247 (464)
T KOG0284|consen 169 M-NNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVK 247 (464)
T ss_pred h-hhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeE
Confidence 5 4555666555 8999999999999999999999999999987765443 4455779999999999999999 888999
Q ss_pred EEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCC
Q 019326 196 IHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAEN 273 (343)
Q Consensus 196 ~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 273 (343)
+||.+++.++.++. |...|..+.|. ++++|++++.|..+++||+++.+.+.+++ +|...|+++.|+|-..+
T Consensus 248 lWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r-~Hkkdv~~~~WhP~~~~------ 320 (464)
T KOG0284|consen 248 LWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYR-GHKKDVTSLTWHPLNES------ 320 (464)
T ss_pred eecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhh-cchhhheeecccccccc------
Confidence 99999999999887 88899999998 56899999999999999999999999999 99999999999998764
Q ss_pred CeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCC
Q 019326 274 PYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKG 334 (343)
Q Consensus 274 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~ 334 (343)
+|.+|+.||.|..|.+... .+.......+...|.+|+++|-|.+++.++.|...+-
T Consensus 321 --lftsgg~Dgsvvh~~v~~~---~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rf 376 (464)
T KOG0284|consen 321 --LFTSGGSDGSVVHWVVGLE---EPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRF 376 (464)
T ss_pred --ceeeccCCCceEEEecccc---ccccCCCcccccceeeeeccccceeEeecCCCcceee
Confidence 8999999999999999833 4445555667778999999999999999999986553
No 28
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=5.1e-36 Score=246.57 Aligned_cols=280 Identities=22% Similarity=0.286 Sum_probs=243.2
Q ss_pred EEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEE
Q 019326 36 FSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVS 113 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 113 (343)
..+++|.++|++++|+ +++|++++.||.|++|++.+++....+..| ...+..+.|+|++ +++++++.+|.|+
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~i~~~~~~~~~-----~~l~~~~~~~~i~ 76 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGH-TGPVRDVAASADG-----TYLASGSSDKTIR 76 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecC-CcceeEEEECCCC-----CEEEEEcCCCeEE
Confidence 4566899999999999 689999999999999999998888888888 8889999999998 7999999999999
Q ss_pred EEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEEe-C
Q 019326 114 IFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMVT-E 191 (343)
Q Consensus 114 iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~ 191 (343)
+||+.+++.+..+..|...+.++.|+++++++++++.++.+.+||+++++...... +...+.++.++|++.+++++. +
T Consensus 77 i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~ 156 (289)
T cd00200 77 LWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQD 156 (289)
T ss_pred EEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCC
Confidence 99999888888899999999999999998888888889999999999877666555 456799999999999998884 9
Q ss_pred CcEEEEEcccceeEEEec-CCcceEEeeecCC-CeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCC
Q 019326 192 EKVGIHQAEDAKLLCELD-GKKRILCAAPGEN-GVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGS 269 (343)
Q Consensus 192 ~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 269 (343)
+.+.+||+++++....+. +...+.++.++++ +.+++++.++.|++||+++++.+..+. .|...+.++.+++++.
T Consensus 157 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~--- 232 (289)
T cd00200 157 GTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLR-GHENGVNSVAFSPDGY--- 232 (289)
T ss_pred CcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchh-hcCCceEEEEEcCCCc---
Confidence 999999999888887776 5668999999854 488888889999999999999998887 7999999999999865
Q ss_pred CCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCc
Q 019326 270 TAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 270 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~ 335 (343)
++++++.||.|++||+.++....... .+...|.++++++++.+++.+..++..+.+
T Consensus 233 ------~~~~~~~~~~i~i~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw 288 (289)
T cd00200 233 ------LLASGSEDGTIRVWDLRTGECVQTLS----GHTNSVTSLAWSPDGKRLASGSADGTIRIW 288 (289)
T ss_pred ------EEEEEcCCCcEEEEEcCCceeEEEcc----ccCCcEEEEEECCCCCEEEEecCCCeEEec
Confidence 88888889999999998754322222 334579999999999999999988876544
No 29
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=8.5e-37 Score=263.64 Aligned_cols=265 Identities=26% Similarity=0.415 Sum_probs=231.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEc-CCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDL-STSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~-~~~~~~~~~ 78 (343)
.|++++.++.+++|+... .+. .....+.+|...|.+++|+ +.++++++.|++|++||+ ..+..++.+
T Consensus 173 ~l~~~~~~~~i~~~~~~~-------~~~---~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l 242 (456)
T KOG0266|consen 173 ALAAASSDGLIRIWKLEG-------IKS---NLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTL 242 (456)
T ss_pred eEEEccCCCcEEEeeccc-------ccc---hhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEe
Confidence 378899999999999965 111 2455557999999999999 889999999999999999 556899999
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
.+| ...|++++|+|.+ +++++|+.|++|++||+++++++..+.+|.+.|++++|++++++|++++.|+.|++||
T Consensus 243 ~gH-~~~v~~~~f~p~g-----~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd 316 (456)
T KOG0266|consen 243 KGH-STYVTSVAFSPDG-----NLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWD 316 (456)
T ss_pred cCC-CCceEEEEecCCC-----CEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEE
Confidence 999 9999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCce--eEEEEcC--C-cceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEe---eec-CCCeEEE
Q 019326 159 LVRGRR--SFYHKIG--K-EASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCA---APG-ENGVLFT 227 (343)
Q Consensus 159 ~~~~~~--~~~~~~~--~-~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~---~~~-~~~~l~~ 227 (343)
+.++.. ....... . .+..+.|+|++.+++++ .|+.+++||+..+.....+. |...+.|+ ..+ .+.++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s 396 (456)
T KOG0266|consen 317 LETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYS 396 (456)
T ss_pred CCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEE
Confidence 999983 2332222 2 57999999999999999 88899999999998888877 44433332 223 5789999
Q ss_pred EeCCCcEEEEECCCCceeEEecccc-cccEEEEEEEecCCCCCCCCCCeEEEEEc--CCCcEEEEecc
Q 019326 228 GGEDRSITAWDTNSGKVAYCIEDAH-SARVKGIVVLTKNDGGSTAENPYLVASAS--SDGVICVWDVR 292 (343)
Q Consensus 228 ~~~dg~i~i~d~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~l~s~~--~dg~i~vwd~~ 292 (343)
|+.|+.|++||+.++..+..+. +| ...+..+.+++... ++++++ .|+.+++|..+
T Consensus 397 g~~d~~v~~~~~~s~~~~~~l~-~h~~~~~~~~~~~~~~~---------~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 397 GSEDGSVYVWDSSSGGILQRLE-GHSKAAVSDLSSHPTEN---------LIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred EeCCceEEEEeCCccchhhhhc-CCCCCceeccccCCCcC---------eeeecCcCCCceEEEecCC
Confidence 9999999999999999999999 99 89999999999987 899888 78999999865
No 30
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.6e-35 Score=249.44 Aligned_cols=319 Identities=14% Similarity=0.171 Sum_probs=263.6
Q ss_pred CeeEEeccCCeEEEEEeecCCCCCCC----------------Ccc-----e-eeEEeEEecCCCCCeEEEEec--CceEE
Q 019326 1 MSLIAGSYEKFIWGYKLKPSNHYSSD----------------QKT-----L-TLTQLFSYPAHLSPITTVAVS--GTAAA 56 (343)
Q Consensus 1 ~~l~~g~~d~~i~vw~~~~~~~~~~~----------------~~~-----~-~~~~~~~~~~h~~~v~~l~~~--~~~l~ 56 (343)
+.|++.+.||.+.+|.....++.+.+ ++. . ......-+......|++.+|+ .+.|+
T Consensus 202 ~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lv 281 (893)
T KOG0291|consen 202 LDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLV 281 (893)
T ss_pred ceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEE
Confidence 46889999999999998743222111 111 1 111122233334789999999 67899
Q ss_pred EeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC-CeEEEEECCCcceeeeeeeccccEEE
Q 019326 57 SGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD-GFVSIFDADPFVLLTSVKVHKKGVND 135 (343)
Q Consensus 57 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~v~~ 135 (343)
+|-..|...+|.+....+++.+.-. ..+|..++|+..| ..|+.|+.. |.+.||+......+...++|...+++
T Consensus 282 vgFssG~f~LyelP~f~lih~LSis-~~~I~t~~~N~tG-----DWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~ 355 (893)
T KOG0291|consen 282 VGFSSGEFGLYELPDFNLIHSLSIS-DQKILTVSFNSTG-----DWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITS 355 (893)
T ss_pred EEecCCeeEEEecCCceEEEEeecc-cceeeEEEecccC-----CEEEEcCCccceEEEEEeeccceeeeccccccceee
Confidence 9999999999999999999999877 7899999999998 788887764 89999999988888888999999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcc
Q 019326 136 LAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKR 213 (343)
Q Consensus 136 i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~ 213 (343)
++++|||+++++|+.||.|++||...+-+...+. +...++.+.|+..++.++++ -||+++.||+...+..+++..+.+
T Consensus 356 l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p 435 (893)
T KOG0291|consen 356 LAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEP 435 (893)
T ss_pred EEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCc
Confidence 9999999999999999999999999998877665 45789999999999999999 999999999999999999986665
Q ss_pred e--EEeeecC-CCeEEEEeCCC-cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 214 I--LCAAPGE-NGVLFTGGEDR-SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 214 i--~~~~~~~-~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
+ .|++..+ +.++.+|+.|. .|++|++++|+.+-.+. +|.++|.+++|+|.+. .|+|+|.|.+||+|
T Consensus 436 ~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLs-GHEgPVs~l~f~~~~~---------~LaS~SWDkTVRiW 505 (893)
T KOG0291|consen 436 IQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILS-GHEGPVSGLSFSPDGS---------LLASGSWDKTVRIW 505 (893)
T ss_pred eeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhc-CCCCcceeeEEccccC---------eEEeccccceEEEE
Confidence 4 5666654 56777777665 49999999999999999 9999999999999998 99999999999999
Q ss_pred eccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 290 DVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 290 d~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
|+-... ...........+..++|+|+|+-++...-|+++--++..+
T Consensus 506 ~if~s~----~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~ 551 (893)
T KOG0291|consen 506 DIFSSS----GTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKE 551 (893)
T ss_pred EeeccC----ceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhh
Confidence 997642 1233455666799999999999999999998766555443
No 31
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=8.2e-37 Score=256.54 Aligned_cols=304 Identities=19% Similarity=0.240 Sum_probs=263.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecC---ceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSG---TAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
++++.+.|..+.+||.++ .+....+-|..+.|..|+|-| ++|++++..+.+|+|++.+..+. .+
T Consensus 295 ~~l~vtaeQnl~l~d~~~------------l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii 361 (775)
T KOG0319|consen 295 QLLLVTAEQNLFLYDEDE------------LTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-II 361 (775)
T ss_pred ceEEEEccceEEEEEccc------------cEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EE
Confidence 577888999999998876 677778889999999999985 89999999999999999887766 78
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc----ceeeeeeeccccEEEEEEecCC-CEEEEEeCCCe
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF----VLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDC 153 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~ 153 (343)
.+| +..|.++.....+ .+|++|+.|.++++|.++.+ .++....+|...|.+++++..+ ..|++++.|.+
T Consensus 362 ~GH-~e~vlSL~~~~~g-----~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~t 435 (775)
T KOG0319|consen 362 PGH-TEAVLSLDVWSSG-----DLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCT 435 (775)
T ss_pred eCc-hhheeeeeecccC-----cEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCce
Confidence 889 9999999955555 59999999999999987433 3566778999999999997765 78999999999
Q ss_pred EEEEEccCCcee----------EEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC
Q 019326 154 LAMVNLVRGRRS----------FYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE 221 (343)
Q Consensus 154 i~~wd~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~ 221 (343)
+++|++...+.. ....+...|++++++|+...++++ .|.+.++|+++.......+. |...+.|+.|++
T Consensus 436 lK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~ 515 (775)
T KOG0319|consen 436 LKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSK 515 (775)
T ss_pred EEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEecc
Confidence 999999873211 112356889999999999999999 99999999999999999998 888999999995
Q ss_pred -CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCC
Q 019326 222 -NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPL 300 (343)
Q Consensus 222 -~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 300 (343)
+..++++|.|++|+||.+.+..+++++. +|...|....|..++. .|+|++.||.|++|++++..+....
T Consensus 516 ~dq~laT~SgD~TvKIW~is~fSClkT~e-GH~~aVlra~F~~~~~---------qliS~~adGliKlWnikt~eC~~tl 585 (775)
T KOG0319|consen 516 NDQLLATCSGDKTVKIWSISTFSCLKTFE-GHTSAVLRASFIRNGK---------QLISAGADGLIKLWNIKTNECEMTL 585 (775)
T ss_pred ccceeEeccCCceEEEEEeccceeeeeec-CccceeEeeeeeeCCc---------EEEeccCCCcEEEEeccchhhhhhh
Confidence 5799999999999999999999999999 9999999999999988 9999999999999999998655433
Q ss_pred cccccccccceeEEEcCCCCceeccccCCCCCCCcccc
Q 019326 301 PLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 301 ~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
. .+..+|.+++.++...+.+.+.+|+.+..+++.
T Consensus 586 D----~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~ 619 (775)
T KOG0319|consen 586 D----AHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDV 619 (775)
T ss_pred h----hccceeEEEeecCccceeEecCCCeEEEEeecC
Confidence 2 456789999999999999999999977655543
No 32
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=6.5e-37 Score=259.21 Aligned_cols=234 Identities=18% Similarity=0.202 Sum_probs=207.6
Q ss_pred eEEeccCCeEEEEEeecCCCCCCC-------------------CcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCC
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSD-------------------QKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTD 61 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~-------------------~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~d 61 (343)
||.|..|..|++|.+.+.+..+.+ ..........++.||.+||..+.|+ .++|++++.|
T Consensus 393 lA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED 472 (707)
T KOG0263|consen 393 LACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSED 472 (707)
T ss_pred hhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeeeecccccceeeccCC
Confidence 678889999999999853211100 0001112234578999999999999 7899999999
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecC
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHS 141 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~ 141 (343)
+++|+|.+.+..++-.+++| ..+|+.+.|+|.| -+|++++.|++.++|..+..++.+.+.+|.+.|.|+.|+|+
T Consensus 473 ~svRLWsl~t~s~~V~y~GH-~~PVwdV~F~P~G-----yYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPN 546 (707)
T KOG0263|consen 473 SSVRLWSLDTWSCLVIYKGH-LAPVWDVQFAPRG-----YYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPN 546 (707)
T ss_pred cceeeeecccceeEEEecCC-CcceeeEEecCCc-----eEEEecCCCceeeeeecccCCchhhhcccccccceEEECCc
Confidence 99999999999999999999 9999999999999 79999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEee
Q 019326 142 GKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAA 218 (343)
Q Consensus 142 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~ 218 (343)
..++++|+.|.++++||+.+|..++.+. +..+|.+++|+|+|++++++ .++.|.+||+.+++.+..+. |.+.|.++.
T Consensus 547 s~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~Sls 626 (707)
T KOG0263|consen 547 SNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLS 626 (707)
T ss_pred ccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEE
Confidence 9999999999999999999999887765 45889999999999999999 99999999999999988877 888999999
Q ss_pred ec-CCCeEEEEeCCCcEEEEECCCC
Q 019326 219 PG-ENGVLFTGGEDRSITAWDTNSG 242 (343)
Q Consensus 219 ~~-~~~~l~~~~~dg~i~i~d~~~~ 242 (343)
|+ +++.|++|+.|.+|++||+...
T Consensus 627 FS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 627 FSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred EecCCCEEEecCCCCeEEEEEchhh
Confidence 99 7889999999999999998643
No 33
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=1.7e-35 Score=221.00 Aligned_cols=284 Identities=18% Similarity=0.213 Sum_probs=231.7
Q ss_pred eEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCC---CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEE
Q 019326 32 LTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLST---SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFS 105 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s 105 (343)
+..++.+++|.+.+..++|+ |..||+|+.|..||+|+... -.+...+...|+..|.+++|+|.+ ++|++
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g-----~~La~ 78 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHG-----RYLAS 78 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCC-----cEEEE
Confidence 45567788999999999999 34899999999999999985 345555544339999999999999 89999
Q ss_pred eeCCCeEEEEECC--CcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCcee----EEEEcCCcceEEEE
Q 019326 106 TSADGFVSIFDAD--PFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRS----FYHKIGKEASLIKF 179 (343)
Q Consensus 106 ~~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~----~~~~~~~~~~~~~~ 179 (343)
|+.|.++.||.-. ..+++.++.+|...|.+++|+++|++|++++.|+.|-+|.+..+... ....+.+.|..+.|
T Consensus 79 aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~W 158 (312)
T KOG0645|consen 79 ASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIW 158 (312)
T ss_pred eeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEE
Confidence 9999999999874 46789999999999999999999999999999999999999865432 23456688999999
Q ss_pred eCCCCEEEEE-eCCcEEEEEcc---cceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEeccccc
Q 019326 180 DGSGEKFFMV-TEEKVGIHQAE---DAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHS 253 (343)
Q Consensus 180 ~~~~~~~~~~-~~~~i~~~d~~---~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~ 253 (343)
+|...+|+++ .|++|++|+-. .-.+.+++. |...|.+++|++ +..|++++.|++++||-.. ..+...|+
T Consensus 159 HPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~-----~~~~~~~s 233 (312)
T KOG0645|consen 159 HPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLY-----TDLSGMHS 233 (312)
T ss_pred cCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeec-----cCcchhcc
Confidence 9999999999 99999999876 335677777 667999999995 6799999999999999865 33444588
Q ss_pred ccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcc---cccccccceeEEEcCCC-CceeccccCC
Q 019326 254 ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPL---AEAKTNSRLTCLAGSST-KSFKRPQIGD 329 (343)
Q Consensus 254 ~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~i~~~~~s~~-~~~~~~~~~~ 329 (343)
.++..+.|. ++ .|+|++.|+.|++|.-..........+ ....+...|+++.|.|. ..+++++..|
T Consensus 234 r~~Y~v~W~-~~----------~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DD 302 (312)
T KOG0645|consen 234 RALYDVPWD-NG----------VIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDD 302 (312)
T ss_pred cceEeeeec-cc----------ceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCC
Confidence 999999998 43 899999999999998775321111111 11233447999999995 6788888888
Q ss_pred CCCCCcc
Q 019326 330 SAPKGEE 336 (343)
Q Consensus 330 ~~~~~~~ 336 (343)
+.++..+
T Consensus 303 G~v~~W~ 309 (312)
T KOG0645|consen 303 GIVNFWE 309 (312)
T ss_pred ceEEEEE
Confidence 8776554
No 34
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=2.9e-38 Score=243.88 Aligned_cols=271 Identities=20% Similarity=0.320 Sum_probs=228.4
Q ss_pred CCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc
Q 019326 41 HLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120 (343)
Q Consensus 41 h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 120 (343)
....|.|+.++.+.+++|..|.+|+|||..+..+...+.+| ++.|.|+.|.. +.+++|+.|.+|++||.+++
T Consensus 196 ~skgVYClQYDD~kiVSGlrDnTikiWD~n~~~c~~~L~GH-tGSVLCLqyd~-------rviisGSSDsTvrvWDv~tg 267 (499)
T KOG0281|consen 196 NSKGVYCLQYDDEKIVSGLRDNTIKIWDKNSLECLKILTGH-TGSVLCLQYDE-------RVIVSGSSDSTVRVWDVNTG 267 (499)
T ss_pred cCCceEEEEecchhhhcccccCceEEeccccHHHHHhhhcC-CCcEEeeeccc-------eEEEecCCCceEEEEeccCC
Confidence 45789999999999999999999999999999999999999 99999999964 58999999999999999999
Q ss_pred ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeE----EEEcCCcceEEEEeCCCCEEEEE-eCCcEE
Q 019326 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF----YHKIGKEASLIKFDGSGEKFFMV-TEEKVG 195 (343)
Q Consensus 121 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~ 195 (343)
+++.++-.|...|..+.|+.. ++++++.|.++.+||+.....+. ...+...++.+.|+ .++++++ +|.+|+
T Consensus 268 e~l~tlihHceaVLhlrf~ng--~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTik 343 (499)
T KOG0281|consen 268 EPLNTLIHHCEAVLHLRFSNG--YMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIK 343 (499)
T ss_pred chhhHHhhhcceeEEEEEeCC--EEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEE
Confidence 999999999999999999854 99999999999999997665221 22334567777775 4599999 999999
Q ss_pred EEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCC
Q 019326 196 IHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENP 274 (343)
Q Consensus 196 ~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 274 (343)
+|++.+++.++.+. |...|.|+.+ .++++++|+.|.+|++||+..|.++..++ +|..-|.++.|...
T Consensus 344 vW~~st~efvRtl~gHkRGIAClQY-r~rlvVSGSSDntIRlwdi~~G~cLRvLe-GHEeLvRciRFd~k---------- 411 (499)
T KOG0281|consen 344 VWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLE-GHEELVRCIRFDNK---------- 411 (499)
T ss_pred EEeccceeeehhhhcccccceehhc-cCeEEEecCCCceEEEEeccccHHHHHHh-chHHhhhheeecCc----------
Confidence 99999999999998 7788888888 78999999999999999999999999999 99999999999765
Q ss_pred eEEEEEcCCCcEEEEeccCccccC----CCc-ccccccccceeEEE--------cCCCCceeccccCCCCCCCcc
Q 019326 275 YLVASASSDGVICVWDVRMAIKEK----PLP-LAEAKTNSRLTCLA--------GSSTKSFKRPQIGDSAPKGEE 336 (343)
Q Consensus 275 ~~l~s~~~dg~i~vwd~~~~~~~~----~~~-~~~~~~~~~i~~~~--------~s~~~~~~~~~~~~~~~~~~~ 336 (343)
.+++|+.||+|+|||+.++.... ... .....+.++|..+. .+-+...++|..-++.+-..+
T Consensus 412 -rIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~fqIvsssHddtILiWdFl~~~~~~~~ 485 (499)
T KOG0281|consen 412 -RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNGPPSAAE 485 (499)
T ss_pred -eeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeecceEEEeccCCCeEEEEEcCCCCccccc
Confidence 79999999999999999874221 111 12224445665554 466788888888877655433
No 35
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=3.2e-36 Score=227.97 Aligned_cols=262 Identities=17% Similarity=0.252 Sum_probs=227.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.|..|.+|++.. ..+-...+++|.++|..+.|. ++.+++++.|.+|+.||.++|+.++.++
T Consensus 61 ~~aSgG~Dr~I~LWnv~g-----------dceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k 129 (338)
T KOG0265|consen 61 CFASGGSDRAIVLWNVYG-----------DCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHK 129 (338)
T ss_pred eEeecCCcceEEEEeccc-----------cccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhc
Confidence 489999999999999764 144556677999999999998 8999999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
.| ..-|+++.-+.-+ +.++.+++.|+++++||+++...++++. .+-+++++.|..++..+++|+-|+.|++||+
T Consensus 130 ~h-~~~vNs~~p~rrg----~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd~ 203 (338)
T KOG0265|consen 130 GH-TSFVNSLDPSRRG----PQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWDL 203 (338)
T ss_pred cc-cceeeecCccccC----CeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecccccceeeccccCceeeecc
Confidence 99 9999999866555 4788899999999999999988888775 4668999999999999999999999999999
Q ss_pred cCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc----eeEEEec---CC--cceEEeeecC-CCeEEE
Q 019326 160 VRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA----KLLCELD---GK--KRILCAAPGE-NGVLFT 227 (343)
Q Consensus 160 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~----~~~~~~~---~~--~~i~~~~~~~-~~~l~~ 227 (343)
+.+....... +...|..+..+++|.++.+- .|..+++||++.. +++..+. |. .....++|++ +..+.+
T Consensus 204 r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~a 283 (338)
T KOG0265|consen 204 RKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITA 283 (338)
T ss_pred ccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCcccc
Confidence 9988776655 45889999999999999998 9999999999853 3355554 33 3345566664 578889
Q ss_pred EeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 228 GGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 228 ~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
|+.|..+++||......+..++ +|.+.|++++|+|..+ +|.+++.|.+|++=.
T Consensus 284 gs~dr~vyvwd~~~r~~lyklp-Gh~gsvn~~~Fhp~e~---------iils~~sdk~i~lge 336 (338)
T KOG0265|consen 284 GSADRFVYVWDTTSRRILYKLP-GHYGSVNEVDFHPTEP---------IILSCSSDKTIYLGE 336 (338)
T ss_pred ccccceEEEeecccccEEEEcC-CcceeEEEeeecCCCc---------EEEEeccCceeEeec
Confidence 9999999999999999999999 9999999999999998 999999999998743
No 36
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=3.7e-36 Score=234.37 Aligned_cols=260 Identities=18% Similarity=0.251 Sum_probs=227.7
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-----CceEEEeeCCCeEEEEEcCCCee---
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-----GTAAASGGTDDTIHLYDLSTSSS--- 74 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-----~~~l~s~~~dg~i~iwd~~~~~~--- 74 (343)
|++|++||.+++||... +..+.+.||.++|.+++|. ...|++++.|.++++|..+.++.
T Consensus 118 IltgsYDg~~riWd~~G-------------k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~ 184 (423)
T KOG0313|consen 118 ILTGSYDGTSRIWDLKG-------------KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVK 184 (423)
T ss_pred EEEeecCCeeEEEecCC-------------ceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhh
Confidence 78999999999999875 5667778999999999986 34599999999999999887743
Q ss_pred -eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC-------------------------Ccceeeeeee
Q 019326 75 -LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD-------------------------PFVLLTSVKV 128 (343)
Q Consensus 75 -~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-------------------------~~~~~~~~~~ 128 (343)
+..-.+| ...|-+++..+++ ..+++|+.|.+|.+|+.. ++.++.++.+
T Consensus 185 ~~~~~~GH-k~~V~sVsv~~sg-----tr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~G 258 (423)
T KOG0313|consen 185 ALKVCRGH-KRSVDSVSVDSSG-----TRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEG 258 (423)
T ss_pred HHhHhccc-ccceeEEEecCCC-----CeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecc
Confidence 2333588 9999999999999 899999999999999931 1245677889
Q ss_pred ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccce---e
Q 019326 129 HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAK---L 204 (343)
Q Consensus 129 ~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~---~ 204 (343)
|..+|.++.|++ ...+++++.|.+|+.||+.++........+....++..+|...+++++ .|..+++||.+++. .
T Consensus 259 Ht~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v 337 (423)
T KOG0313|consen 259 HTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVV 337 (423)
T ss_pred cccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCcee
Confidence 999999999998 668999999999999999999999999999999999999999999999 99999999999764 2
Q ss_pred EEEec-CCcceEEeeecC--CCeEEEEeCCCcEEEEECCCCc-eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEE
Q 019326 205 LCELD-GKKRILCAAPGE--NGVLFTGGEDRSITAWDTNSGK-VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASA 280 (343)
Q Consensus 205 ~~~~~-~~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 280 (343)
..++. |..-|.++.|++ ...|++|+.|+++++||+++.+ ++..+. +|...|.++.|.... .+++|
T Consensus 338 ~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~-~h~DKvl~vdW~~~~----------~IvSG 406 (423)
T KOG0313|consen 338 SQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIA-GHNDKVLSVDWNEGG----------LIVSG 406 (423)
T ss_pred EEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeec-cCCceEEEEeccCCc----------eEEec
Confidence 23333 888999999995 4589999999999999999887 999999 999999999998776 89999
Q ss_pred cCCCcEEEEeccC
Q 019326 281 SSDGVICVWDVRM 293 (343)
Q Consensus 281 ~~dg~i~vwd~~~ 293 (343)
|.|.+|+|+.-..
T Consensus 407 GaD~~l~i~~~~~ 419 (423)
T KOG0313|consen 407 GADNKLRIFKGSP 419 (423)
T ss_pred cCcceEEEecccc
Confidence 9999999997653
No 37
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=2e-35 Score=220.65 Aligned_cols=265 Identities=18% Similarity=0.261 Sum_probs=218.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC--eeeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS--SSLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~--~~~~~ 77 (343)
-|++++.|+.|++|++.. +..+.++.+.. .+|+..|.+++|+ |++|++|+.|.++.||.-..+ +++..
T Consensus 29 ilAscg~Dk~vriw~~~~-------~~s~~ck~vld-~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~ 100 (312)
T KOG0645|consen 29 ILASCGTDKAVRIWSTSS-------GDSWTCKTVLD-DGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVAT 100 (312)
T ss_pred EEEeecCCceEEEEecCC-------CCcEEEEEecc-ccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEee
Confidence 489999999999999985 23344443333 3799999999997 999999999999999987654 67889
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC---CcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeE
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD---PFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCL 154 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i 154 (343)
+.+| ...|.|++|++++ ++|++++.|..|-||.+. ..++...++.|...|..+.|+|...+|++++.|++|
T Consensus 101 lEGH-EnEVK~Vaws~sG-----~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTI 174 (312)
T KOG0645|consen 101 LEGH-ENEVKCVAWSASG-----NYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTI 174 (312)
T ss_pred eecc-ccceeEEEEcCCC-----CEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeE
Confidence 9999 9999999999999 899999999999999985 456888999999999999999999999999999999
Q ss_pred EEEEcc-CCc--eeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEe
Q 019326 155 AMVNLV-RGR--RSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGG 229 (343)
Q Consensus 155 ~~wd~~-~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~ 229 (343)
++|+-. ... +...+. +...+.+++|++.|..++++ .|+.++||..... ....|..++..+.|. +..+++++
T Consensus 175 k~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~---~~~~~sr~~Y~v~W~-~~~IaS~g 250 (312)
T KOG0645|consen 175 KVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD---LSGMHSRALYDVPWD-NGVIASGG 250 (312)
T ss_pred EEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC---cchhcccceEeeeec-ccceEecc
Confidence 999877 332 233332 33578999999999999999 9999999986521 112266788889996 78999999
Q ss_pred CCCcEEEEECCCC------ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 230 EDRSITAWDTNSG------KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 230 ~dg~i~i~d~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
.|+.|++|..... +.+......|...|++++|.|...+ +|++++.||.|++|.+.
T Consensus 251 gD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~--------~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 251 GDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSN--------RLASGGDDGIVNFWELE 311 (312)
T ss_pred CCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCC--------ceeecCCCceEEEEEec
Confidence 9999999976542 2333344589999999999995332 89999999999999875
No 38
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=6.2e-35 Score=240.09 Aligned_cols=261 Identities=28% Similarity=0.396 Sum_probs=230.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++++.||.|++|++.. ......+..|...+..+.|. ++.+++++.||.|++|++.+++.+..+.
T Consensus 23 ~l~~~~~~g~i~i~~~~~------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~ 90 (289)
T cd00200 23 LLATGSGDGTIKVWDLET------------GELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLT 90 (289)
T ss_pred EEEEeecCcEEEEEEeeC------------CCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEe
Confidence 478888899999999986 22455667899999999998 6699999999999999999988888888
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
.| ...+.++.|++++ +++++++.++.|.+||+.+++....+..|...+.+++|+|++.++++++.++.|++||+
T Consensus 91 ~~-~~~i~~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~ 164 (289)
T cd00200 91 GH-TSYVSSVAFSPDG-----RILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDL 164 (289)
T ss_pred cc-CCcEEEEEEcCCC-----CEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEc
Confidence 88 7899999999987 68888888999999999988888889889999999999999888888888999999999
Q ss_pred cCCceeEEEEcC-CcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEe-cCCcceEEeeecC-CCeEEEEeCCCcEE
Q 019326 160 VRGRRSFYHKIG-KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCEL-DGKKRILCAAPGE-NGVLFTGGEDRSIT 235 (343)
Q Consensus 160 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~-~~~~~i~~~~~~~-~~~l~~~~~dg~i~ 235 (343)
++++........ ..+.++.|+|+++.++++ .++.+.+||++.++....+ .+...+.++.+++ +.++++++.+|.|+
T Consensus 165 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~ 244 (289)
T cd00200 165 RTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIR 244 (289)
T ss_pred cccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEE
Confidence 987766655543 579999999999888888 8999999999999988888 5778999999986 45666777799999
Q ss_pred EEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 236 i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
+||+.+++....+. .|...|.+++|++++. +|++++.||.|++|+
T Consensus 245 i~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~---------~l~~~~~d~~i~iw~ 289 (289)
T cd00200 245 VWDLRTGECVQTLS-GHTNSVTSLAWSPDGK---------RLASGSADGTIRIWD 289 (289)
T ss_pred EEEcCCceeEEEcc-ccCCcEEEEEECCCCC---------EEEEecCCCeEEecC
Confidence 99999999999998 8999999999999876 999999999999996
No 39
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1e-36 Score=240.05 Aligned_cols=269 Identities=20% Similarity=0.241 Sum_probs=233.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.||+++.|.+..+|++.. .. .++..+++.+|..+|..+.|+ .++|++++.|..+.+||+.+|.+...+.
T Consensus 238 yLAsaSkD~Taiiw~v~~-------d~--~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~ 308 (519)
T KOG0293|consen 238 YLASASKDSTAIIWIVVY-------DV--HFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYP 308 (519)
T ss_pred eEeeccCCceEEEEEEec-------Cc--ceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcc
Confidence 489999999999999976 22 267788999999999999999 7899999999999999999999888775
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecc-ccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHK-KGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
..+...+.+++|.|++ ..+++|+.|+++..||++. .....+++-. ..|.+++..+||+++++.+.|..|++++
T Consensus 309 ~~~~~S~~sc~W~pDg-----~~~V~Gs~dr~i~~wdlDg-n~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~ 382 (519)
T KOG0293|consen 309 SGLGFSVSSCAWCPDG-----FRFVTGSPDRTIIMWDLDG-NILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYN 382 (519)
T ss_pred cCcCCCcceeEEccCC-----ceeEecCCCCcEEEecCCc-chhhcccccccceeEEEEEcCCCcEEEEEecccceeeec
Confidence 4336889999999999 7999999999999999976 3455555433 4699999999999999999999999999
Q ss_pred ccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCC---cceEEeeec--CCCeEEEEeCCC
Q 019326 159 LVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGK---KRILCAAPG--ENGVLFTGGEDR 232 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~---~~i~~~~~~--~~~~l~~~~~dg 232 (343)
.++...........++..++++.+++++++. .+..+.+||++..+.++++.+. .-+..-+|. +..++++|++|+
T Consensus 383 ~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~ 462 (519)
T KOG0293|consen 383 REARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDS 462 (519)
T ss_pred hhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCc
Confidence 9887777677788999999999999999999 9999999999988888777632 234444554 457999999999
Q ss_pred cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 233 SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 233 ~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.|+||+..+++++..+. +|...|++++|+|..+ .++|++|.||+||||.....
T Consensus 463 kvyIWhr~sgkll~~Ls-GHs~~vNcVswNP~~p--------~m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 463 KVYIWHRISGKLLAVLS-GHSKTVNCVSWNPADP--------EMFASASDDGTIRIWGPSDN 515 (519)
T ss_pred eEEEEEccCCceeEeec-CCcceeeEEecCCCCH--------HHhhccCCCCeEEEecCCcc
Confidence 99999999999999999 9999999999998865 48999999999999988753
No 40
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=3.1e-36 Score=228.01 Aligned_cols=284 Identities=16% Similarity=0.195 Sum_probs=241.5
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCC-CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLST-SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA 108 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~ 108 (343)
..++..+.+|.+.|+.+.|+ |..||+|+.|..|.+|++.. .+-...+++| .++|..+.|.+++ +.+++++.
T Consensus 37 ~ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgH-sgAVM~l~~~~d~-----s~i~S~gt 110 (338)
T KOG0265|consen 37 QAPIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGH-SGAVMELHGMRDG-----SHILSCGT 110 (338)
T ss_pred cchhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccc-cceeEeeeeccCC-----CEEEEecC
Confidence 45667778999999999999 89999999999999999653 4556778899 9999999999999 89999999
Q ss_pred CCeEEEEECCCcceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEE
Q 019326 109 DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 109 dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
|.+|+.||.++++.++.+++|...|++++-..-| .++.+++.|+++++||+++...+..+..+.++.++.|...+..+.
T Consensus 111 Dk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~ 190 (338)
T KOG0265|consen 111 DKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVI 190 (338)
T ss_pred CceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEeccccccee
Confidence 9999999999999999999999999999855445 567788889999999999998888888889999999999999999
Q ss_pred EE-eCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCC----ceeEEecccccc----cE
Q 019326 188 MV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSG----KVAYCIEDAHSA----RV 256 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~h~~----~v 256 (343)
++ -|+.|++||++.......+. |..+|+.+..+ .+.++.+-+.|.++++||++.. .++..+. +|.. ..
T Consensus 191 sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~-g~~hnfeknl 269 (338)
T KOG0265|consen 191 SGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQ-GHIHNFEKNL 269 (338)
T ss_pred eccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEee-cchhhhhhhc
Confidence 99 99999999999999999988 88999999998 5779999999999999999754 2355555 4432 33
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCc
Q 019326 257 KGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~ 335 (343)
...+|+|++. .+.+|+.|..+++||....... +.-..+.+.|++++|+|...++.....|+.+..-
T Consensus 270 L~cswsp~~~---------~i~ags~dr~vyvwd~~~r~~l----yklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lg 335 (338)
T KOG0265|consen 270 LKCSWSPNGT---------KITAGSADRFVYVWDTTSRRIL----YKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLG 335 (338)
T ss_pred ceeeccCCCC---------ccccccccceEEEeecccccEE----EEcCCcceeEEEeeecCCCcEEEEeccCceeEee
Confidence 4556777666 9999999999999999874322 2222445569999999999999999998876543
No 41
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=100.00 E-value=2.5e-37 Score=228.34 Aligned_cols=266 Identities=19% Similarity=0.234 Sum_probs=237.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++++.|+.=.+-+-++ ..-+.+|.||++.|.+...+ ....|+++.|-+-++||.-+|..+..|.
T Consensus 31 flisa~kd~~pmlr~g~t------------gdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~ 98 (334)
T KOG0278|consen 31 FLISASKDGKPMLRNGDT------------GDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE 98 (334)
T ss_pred EEEEeccCCCchhccCCC------------CCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh
Confidence 466666666655544433 44577889999999999998 4567889999999999999999999887
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc-ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF-VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
| ..-|.+++|+.+. ++|++|+.+..++|||++.. .+...+.+|.+.|..+.|....+.+++.+.|++|++||
T Consensus 99 -h-khivk~~af~~ds-----~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD 171 (334)
T KOG0278|consen 99 -H-KHIVKAVAFSQDS-----NYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWD 171 (334)
T ss_pred -h-hheeeeEEecccc-----hhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEE
Confidence 4 5889999999998 89999999999999999654 46778899999999999999999999999999999999
Q ss_pred ccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeecCC-CeEEEEeCCCcEEEE
Q 019326 159 LVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGEN-GVLFTGGEDRSITAW 237 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~i~ 237 (343)
.+++..+.....+.++.++.++++|+++.++..+.|..||..+..+++.++.+..|.+...+|. +.+++|+.|..++.|
T Consensus 172 ~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kf 251 (334)
T KOG0278|consen 172 HRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKF 251 (334)
T ss_pred eccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999864 688999999999999
Q ss_pred ECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 238 DTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 238 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
|..+++.+..+..+|.++|.++.|+|++. ..++||.||+|++|....++
T Consensus 252 Dy~TgeEi~~~nkgh~gpVhcVrFSPdGE---------~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 252 DYNTGEEIGSYNKGHFGPVHCVRFSPDGE---------LYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred eccCCceeeecccCCCCceEEEEECCCCc---------eeeccCCCceEEEEEecCCC
Confidence 99999999887449999999999999998 99999999999999987653
No 42
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=4.3e-36 Score=252.23 Aligned_cols=264 Identities=20% Similarity=0.250 Sum_probs=229.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEE-ec-CceEEEeeCCCeEEEEEcCCC----eee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVA-VS-GTAAASGGTDDTIHLYDLSTS----SSL 75 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~-~~-~~~l~s~~~dg~i~iwd~~~~----~~~ 75 (343)
.|++++..+.+|+|+..+. . .+.+.||+..|.++. |+ |.+|+||+.|.++++|.++++ .++
T Consensus 338 ~laVATNs~~lr~y~~~~~------------~-c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~ 404 (775)
T KOG0319|consen 338 HLAVATNSPELRLYTLPTS------------Y-CQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCV 404 (775)
T ss_pred eEEEEeCCCceEEEecCCC------------c-eEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhh
Confidence 4789999999999987761 1 226789999999999 55 779999999999999988544 345
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc-----ee----eeeeeccccEEEEEEecCCCEEE
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV-----LL----TSVKVHKKGVNDLAVHHSGKLAL 146 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~----~~~~~~~~~v~~i~~~~~~~~l~ 146 (343)
....+| ...|.+++++..+ ..+|++++.|+++++|++...+ .+ .....|...|++++.+|+.+.++
T Consensus 405 a~~~gH-~~svgava~~~~~----asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiA 479 (775)
T KOG0319|consen 405 AQANGH-TNSVGAVAGSKLG----ASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIA 479 (775)
T ss_pred hhhccc-ccccceeeecccC----ccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEE
Confidence 566788 9999999998776 5899999999999999996521 11 12346999999999999999999
Q ss_pred EEeCCCeEEEEEccCCceeEEE-EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeec-CC
Q 019326 147 TVGRDDCLAMVNLVRGRRSFYH-KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-EN 222 (343)
Q Consensus 147 ~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~ 222 (343)
||+.|++.++|+++..+..... .+...+.++.|+|..+.++++ .|.+|+||.+.++.+++++. |...|..+.|- ++
T Consensus 480 T~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~ 559 (775)
T KOG0319|consen 480 TGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNG 559 (775)
T ss_pred ecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCC
Confidence 9999999999999977765544 455789999999999999999 99999999999999999999 88999999887 67
Q ss_pred CeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 223 GVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 223 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
..|++++.||-|++|++++++++.++. +|...|+++..++... +++||+.||.|.+|.=.+
T Consensus 560 ~qliS~~adGliKlWnikt~eC~~tlD-~H~DrvWaL~~~~~~~---------~~~tgg~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 560 KQLISAGADGLIKLWNIKTNECEMTLD-AHNDRVWALSVSPLLD---------MFVTGGGDGRIIFWKDVT 620 (775)
T ss_pred cEEEeccCCCcEEEEeccchhhhhhhh-hccceeEEEeecCccc---------eeEecCCCeEEEEeecCc
Confidence 899999999999999999999999999 9999999999999987 999999999999995444
No 43
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.1e-36 Score=247.59 Aligned_cols=276 Identities=15% Similarity=0.239 Sum_probs=242.1
Q ss_pred EEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEE
Q 019326 36 FSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVS 113 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 113 (343)
.++..|...|.++.++ ...++++-..|.|.|||.++...++.+.-. .-+|.+..|.+.. +.+++|+.|..|+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~-~~PvRa~kfiaRk-----nWiv~GsDD~~Ir 80 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVS-EVPVRAAKFIARK-----NWIVTGSDDMQIR 80 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeec-ccchhhheeeecc-----ceEEEecCCceEE
Confidence 3445689999999999 678999999999999999999999999988 8999999999888 8999999999999
Q ss_pred EEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc-eeE-EEEcCCcceEEEEeCCC-CEEEEE-
Q 019326 114 IFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR-RSF-YHKIGKEASLIKFDGSG-EKFFMV- 189 (343)
Q Consensus 114 iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~-~~~~~~~~~~~~~~~~~-~~~~~~- 189 (343)
+|+..+++.+..|..|.+.|.+++.+|...++++++.|-+|++||.+.+= +.. ...+.+-|..++|.|.. +.++++
T Consensus 81 Vfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~s 160 (794)
T KOG0276|consen 81 VFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASAS 160 (794)
T ss_pred EEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeee
Confidence 99999999999999999999999999999999999999999999997653 222 23355779999999954 567777
Q ss_pred eCCcEEEEEcccceeEEEec-CCcceEEeeecCCC---eEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecC
Q 019326 190 TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGENG---VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKN 265 (343)
Q Consensus 190 ~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~ 265 (343)
-|++|++|.+....+..++. |...|+|+++-++. +|++|++|..|++||.++..+++++. +|..-|+.+.|+|.-
T Consensus 161 LDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLe-GHt~Nvs~v~fhp~l 239 (794)
T KOG0276|consen 161 LDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLE-GHTNNVSFVFFHPEL 239 (794)
T ss_pred ccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhh-cccccceEEEecCCC
Confidence 89999999999999888888 88999999998544 99999999999999999999999999 999999999999998
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCC
Q 019326 266 DGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSA 331 (343)
Q Consensus 266 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~ 331 (343)
+ +++|||+||++|||+-.+-+.+.... ...+++.|++..+....++.|...+.
T Consensus 240 p---------iiisgsEDGTvriWhs~Ty~lE~tLn----~gleRvW~I~~~k~~~~i~vG~Deg~ 292 (794)
T KOG0276|consen 240 P---------IIISGSEDGTVRIWNSKTYKLEKTLN----YGLERVWCIAAHKGDGKIAVGFDEGS 292 (794)
T ss_pred c---------EEEEecCCccEEEecCcceehhhhhh----cCCceEEEEeecCCCCeEEEeccCCc
Confidence 8 99999999999999998865433222 22457999998887777777777664
No 44
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=1.8e-34 Score=233.80 Aligned_cols=300 Identities=18% Similarity=0.230 Sum_probs=252.2
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeC--CCeEEEEEcCCCeeeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGT--DDTIHLYDLSTSSSLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~--dg~i~iwd~~~~~~~~~ 77 (343)
-+++|...|.|||||.... +.....+++.-.++|..++|+ +.++++.++ +...+++-.++|..+.+
T Consensus 73 yiASGD~sG~vRIWdtt~~----------~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~SvGe 142 (603)
T KOG0318|consen 73 YIASGDVSGKVRIWDTTQK----------EHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGNSVGE 142 (603)
T ss_pred EEeecCCcCcEEEEeccCc----------ceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCCCccce
Confidence 3688889999999998751 234445555667899999999 666666554 33445555567888999
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEE
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMV 157 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~w 157 (343)
+.+| ...|+++.|-|.. |-++++|+.|++|.+|+-...+...+++.|..-|.++.|+|||..+++++.||++.+|
T Consensus 143 i~Gh-Sr~ins~~~KpsR----PfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iy 217 (603)
T KOG0318|consen 143 ITGH-SRRINSVDFKPSR----PFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIY 217 (603)
T ss_pred eecc-ceeEeeeeccCCC----ceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEE
Confidence 9999 9999999999987 5799999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCceeEEEE----cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcc----eEEeeecCCCeEEEE
Q 019326 158 NLVRGRRSFYHK----IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKR----ILCAAPGENGVLFTG 228 (343)
Q Consensus 158 d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~----i~~~~~~~~~~l~~~ 228 (343)
|-.+++.+..+. +.+.|..++|+||+..++++ .|..+++||+.+.++++++..... ...+.| .+..|++-
T Consensus 218 DGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lW-qkd~lItV 296 (603)
T KOG0318|consen 218 DGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLW-QKDHLITV 296 (603)
T ss_pred cCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEE-eCCeEEEE
Confidence 999999888776 56789999999999999999 999999999999999999984433 233344 47789999
Q ss_pred eCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccc
Q 019326 229 GEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTN 308 (343)
Q Consensus 229 ~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 308 (343)
+.+|.|.+++...+.++..+. +|...|+++..++++. +|++|+.||.|.-|+..++... ++....+.
T Consensus 297 Sl~G~in~ln~~d~~~~~~i~-GHnK~ITaLtv~~d~~---------~i~SgsyDG~I~~W~~~~g~~~---~~~g~~h~ 363 (603)
T KOG0318|consen 297 SLSGTINYLNPSDPSVLKVIS-GHNKSITALTVSPDGK---------TIYSGSYDGHINSWDSGSGTSD---RLAGKGHT 363 (603)
T ss_pred EcCcEEEEecccCCChhheec-ccccceeEEEEcCCCC---------EEEeeccCceEEEEecCCcccc---cccccccc
Confidence 999999999999999999999 9999999999999987 9999999999999999988533 23233455
Q ss_pred cceeEEEcCCCCceeccccCCC
Q 019326 309 SRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 309 ~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
..|.+++.+..+.+...+..|.
T Consensus 364 nqI~~~~~~~~~~~~t~g~Dd~ 385 (603)
T KOG0318|consen 364 NQIKGMAASESGELFTIGWDDT 385 (603)
T ss_pred ceEEEEeecCCCcEEEEecCCe
Confidence 5699999888777666665544
No 45
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=5.9e-35 Score=245.94 Aligned_cols=308 Identities=18% Similarity=0.263 Sum_probs=256.9
Q ss_pred ccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCC
Q 019326 7 SYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSS 85 (343)
Q Consensus 7 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 85 (343)
-.++.+..|.++.....+ +.........+.||...|.+++++ .+.++..+..+.+++|+.++.++++++.. ..
T Consensus 341 l~nNtv~~ysl~~s~~~~---p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~---~y 414 (888)
T KOG0306|consen 341 LANNTVEWYSLENSGKTS---PEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITC---GY 414 (888)
T ss_pred eecCceEEEEeccCCCCC---ccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEecc---cc
Confidence 567788888887622111 111122334567999999999999 55555555568899999999999999974 48
Q ss_pred eEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccC----
Q 019326 86 VTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR---- 161 (343)
Q Consensus 86 v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~---- 161 (343)
+.+..|.|.+ +++++|...|.+.+||+.....+.+++.|.+.|++++.+||+..+++|+.|.+|++||..-
T Consensus 415 ~l~~~Fvpgd-----~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~ 489 (888)
T KOG0306|consen 415 ILASKFVPGD-----RYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSV 489 (888)
T ss_pred EEEEEecCCC-----ceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEecc
Confidence 8999999998 8999999999999999999999999999999999999999999999999999999999742
Q ss_pred -Cc--------eeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEe
Q 019326 162 -GR--------RSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGG 229 (343)
Q Consensus 162 -~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~ 229 (343)
+. ......+...+.++.++|++++++++ -|+++++|-+.+.+..-.+- |.-||.|+..+ +++++++|+
T Consensus 490 ~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgS 569 (888)
T KOG0306|consen 490 PGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGS 569 (888)
T ss_pred CcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEecc
Confidence 11 12345667899999999999999999 99999999999988766654 88999999999 568999999
Q ss_pred CCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccccccccc
Q 019326 230 EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNS 309 (343)
Q Consensus 230 ~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 309 (343)
.|..|++|-+.-|.+-+.+- +|...|.++.|.|... ++.|+|.|+.|+-||-..-...+.. . .+..
T Consensus 570 ADKnVKiWGLdFGDCHKS~f-AHdDSvm~V~F~P~~~---------~FFt~gKD~kvKqWDg~kFe~iq~L---~-~H~~ 635 (888)
T KOG0306|consen 570 ADKNVKIWGLDFGDCHKSFF-AHDDSVMSVQFLPKTH---------LFFTCGKDGKVKQWDGEKFEEIQKL---D-GHHS 635 (888)
T ss_pred CCCceEEeccccchhhhhhh-cccCceeEEEEcccce---------eEEEecCcceEEeechhhhhhheee---c-cchh
Confidence 99999999999999999999 9999999999999876 9999999999999998865432222 2 3445
Q ss_pred ceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 310 RLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 310 ~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
.|.|++.+|+|.|+++++.|..++.++..+
T Consensus 636 ev~cLav~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 636 EVWCLAVSPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred eeeeeEEcCCCCeEEeccCCceeEeeeccC
Confidence 699999999999999999988776665543
No 46
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=8.9e-35 Score=251.13 Aligned_cols=286 Identities=22% Similarity=0.273 Sum_probs=238.2
Q ss_pred eEEecCC-CCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe--eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 35 LFSYPAH-LSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS--SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 35 ~~~~~~h-~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
...+.+| ...|+++.|+ |+.+++++.|+.+++|+..+.+ ....+.+| ...|.+++|+|++ +++++++.|
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h-~~~v~~~~fs~d~-----~~l~s~s~D 224 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGH-TRGVSDVAFSPDG-----SYLLSGSDD 224 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhcccccc-ccceeeeEECCCC-----cEEEEecCC
Confidence 4444444 7889999999 8899999999999999998877 77777888 9999999999999 899999999
Q ss_pred CeEEEEEC-CCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-CCcceEEEEeCCCCEEE
Q 019326 110 GFVSIFDA-DPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-GKEASLIKFDGSGEKFF 187 (343)
Q Consensus 110 g~i~iwd~-~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 187 (343)
++|++||+ ..+..++++++|...|++++|+|+++++++|+.|++|++||++++++...... ...+..++|++++.+++
T Consensus 225 ~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~ 304 (456)
T KOG0266|consen 225 KTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLV 304 (456)
T ss_pred ceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEE
Confidence 99999999 66689999999999999999999999999999999999999999888776654 57899999999999999
Q ss_pred EE-eCCcEEEEEcccce--eEEEec-CCc--ceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEE
Q 019326 188 MV-TEEKVGIHQAEDAK--LLCELD-GKK--RILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIV 260 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~~~--~~~~~~-~~~--~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~ 260 (343)
++ .|+.+++||+.++. +...+. +.. ++.++.|+ ++.+++++..|+.+++||+..+..+..+. +|...+.++
T Consensus 305 s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~-~~~~~~~~~- 382 (456)
T KOG0266|consen 305 SASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYT-GHSNLVRCI- 382 (456)
T ss_pred EcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeec-ccCCcceeE-
Confidence 99 89999999999999 445555 222 68999998 56899999999999999999999999998 787754332
Q ss_pred EEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceecccc--CCCCCCCcc
Q 019326 261 VLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQI--GDSAPKGEE 336 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~--~~~~~~~~~ 336 (343)
+++.. .+++.++++|+.|+.|++||+.++.... ....+....+..+++++...+++... .|+.++.++
T Consensus 383 ~~~~~-----~~~~~~i~sg~~d~~v~~~~~~s~~~~~---~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~ 452 (456)
T KOG0266|consen 383 FSPTL-----STGGKLIYSGSEDGSVYVWDSSSGGILQ---RLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWK 452 (456)
T ss_pred ecccc-----cCCCCeEEEEeCCceEEEEeCCccchhh---hhcCCCCCceeccccCCCcCeeeecCcCCCceEEEec
Confidence 11111 2344499999999999999999854222 22223256789999999999998888 566555443
No 47
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=100.00 E-value=4e-35 Score=217.93 Aligned_cols=276 Identities=18% Similarity=0.239 Sum_probs=248.4
Q ss_pred EEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeE--eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCe
Q 019326 36 FSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGA--IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF 111 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 111 (343)
..+++|.+.|.+++|+ |..|++|+.|+++.+|+++..+.... ..+| .+.|-.++|+|.. +.+|++++.|.+
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh-~~svdql~w~~~~----~d~~atas~dk~ 88 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGH-TDSVDQLCWDPKH----PDLFATASGDKT 88 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCC-CcchhhheeCCCC----CcceEEecCCce
Confidence 5667899999999999 99999999999999999998765544 3567 7899999999988 589999999999
Q ss_pred EEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-e
Q 019326 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-T 190 (343)
Q Consensus 112 i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 190 (343)
|++||++.+++...+....+.+ .+.|+|+|.+++.++.|..|...|.++.+..........+..++|+.++..|+.. +
T Consensus 89 ir~wd~r~~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~G 167 (313)
T KOG1407|consen 89 IRIWDIRSGKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNG 167 (313)
T ss_pred EEEEEeccCcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecC
Confidence 9999999999999988655555 4899999999999999999999999999988888888899999999888877777 7
Q ss_pred CCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCC
Q 019326 191 EEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGG 268 (343)
Q Consensus 191 ~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 268 (343)
.|.|.|.....-+++..++ |+....|+.|+ .+++|++|+.|-.+.+||+...-+++.+. .+.-+|..+.|+.+++
T Consensus 168 lG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~is-RldwpVRTlSFS~dg~-- 244 (313)
T KOG1407|consen 168 LGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCIS-RLDWPVRTLSFSHDGR-- 244 (313)
T ss_pred CceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeec-cccCceEEEEeccCcc--
Confidence 7999999999999999988 88889999998 47899999999999999999998999998 8999999999999988
Q ss_pred CCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCC
Q 019326 269 STAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAP 332 (343)
Q Consensus 269 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~ 332 (343)
+||+||+|..|-|=+++++. .+.++++.++...++|+|...+++-...|...
T Consensus 245 -------~lASaSEDh~IDIA~vetGd-----~~~eI~~~~~t~tVAWHPk~~LLAyA~ddk~~ 296 (313)
T KOG1407|consen 245 -------MLASASEDHFIDIAEVETGD-----RVWEIPCEGPTFTVAWHPKRPLLAYACDDKDG 296 (313)
T ss_pred -------eeeccCccceEEeEecccCC-----eEEEeeccCCceeEEecCCCceeeEEecCCCC
Confidence 99999999999999999986 66788888999999999999999887776644
No 48
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.1e-34 Score=244.43 Aligned_cols=306 Identities=19% Similarity=0.247 Sum_probs=250.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.||+|..||.|++|+... .....++.||..+|+++.|+ |..|++|+.|+.|.+||+-...-...+.
T Consensus 79 ~lAVGYaDGsVqif~~~s------------~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~ 146 (888)
T KOG0306|consen 79 LLAVGYADGSVQIFSLES------------EEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLR 146 (888)
T ss_pred eEEEEecCceEEeeccCC------------CceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEee
Confidence 479999999999999986 35677889999999999999 9999999999999999999888888999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
+| +..|+..-|.... +++++.+.|+.|++||+++..+..+.-.|.+.++.+++++ +.+++++.|+.+++|++
T Consensus 147 GH-kd~iT~~~F~~~~-----~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L 218 (888)
T KOG0306|consen 147 GH-KDSITQALFLNGD-----SFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE--KLLVTAGTDSELKVWEL 218 (888)
T ss_pred cc-hHHHhHHhccCCC-----eEEEEeccCceEEEEecccceeeeEEecccceEEEEEEec--ceEEEEecCCceEEEEe
Confidence 99 9999999999866 7999999999999999999999999999999999999998 68999999999999998
Q ss_pred cC------------------------CceeE-----------EEE-----------------------------------
Q 019326 160 VR------------------------GRRSF-----------YHK----------------------------------- 169 (343)
Q Consensus 160 ~~------------------------~~~~~-----------~~~----------------------------------- 169 (343)
.. ++.+. ...
T Consensus 219 ~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e 298 (888)
T KOG0306|consen 219 AFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEE 298 (888)
T ss_pred ecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccc
Confidence 10 00000 000
Q ss_pred -------------------------------------------------------------------------cCCcceE
Q 019326 170 -------------------------------------------------------------------------IGKEASL 176 (343)
Q Consensus 170 -------------------------------------------------------------------------~~~~~~~ 176 (343)
+...|..
T Consensus 299 ~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRs 378 (888)
T KOG0306|consen 299 NEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRS 378 (888)
T ss_pred cccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeE
Confidence 0012244
Q ss_pred EEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEeccccccc
Q 019326 177 IKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSAR 255 (343)
Q Consensus 177 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~ 255 (343)
++++.+...++++..+.+++|+..+.++++++... .+.+..|.| ++++++|...|.+.+||+.+...+.+++ +|.+.
T Consensus 379 l~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~-y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~-AHdga 456 (888)
T KOG0306|consen 379 LCVSSDSILLASGAGESIKIWNRDTLKCIRTITCG-YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIR-AHDGA 456 (888)
T ss_pred EEeecCceeeeecCCCcEEEEEccCcceeEEeccc-cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhh-ccccc
Confidence 56666666666667888999999989998888766 566666665 5688899999999999999888888888 99999
Q ss_pred EEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc-----cC---CCcccccccccceeEEEcCCCCceecccc
Q 019326 256 VKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK-----EK---PLPLAEAKTNSRLTCLAGSSTKSFKRPQI 327 (343)
Q Consensus 256 v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-----~~---~~~~~~~~~~~~i~~~~~s~~~~~~~~~~ 327 (343)
|++++.+|++. .+++||.|.+|++||..-... .+ ............|.|+++|||++|++.+.
T Consensus 457 IWsi~~~pD~~---------g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsL 527 (888)
T KOG0306|consen 457 IWSISLSPDNK---------GFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSL 527 (888)
T ss_pred eeeeeecCCCC---------ceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEe
Confidence 99999999998 899999999999999864321 11 11112334567799999999999999999
Q ss_pred CCCCCCCcccc
Q 019326 328 GDSAPKGEEKA 338 (343)
Q Consensus 328 ~~~~~~~~~~~ 338 (343)
-+...+.+-..
T Consensus 528 LdnTVkVyflD 538 (888)
T KOG0306|consen 528 LDNTVKVYFLD 538 (888)
T ss_pred ccCeEEEEEec
Confidence 99887765443
No 49
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=7.2e-35 Score=213.56 Aligned_cols=258 Identities=17% Similarity=0.222 Sum_probs=221.2
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
.++++.|.+|++|+... ...++++.+|...|..++.+ +..|++|+.|..+.+||+.+|+.++.+.+
T Consensus 32 ~ltcGsdrtvrLWNp~r------------g~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rg 99 (307)
T KOG0316|consen 32 CLTCGSDRTVRLWNPLR------------GALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRG 99 (307)
T ss_pred EEEcCCCceEEeecccc------------cceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeeccc
Confidence 46788999999999876 57889999999999999887 78999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC--cceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP--FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
| .+.|+.++|+... ..+++|+.|.++++||.+. .++++.+......|.++... +..+++|+.||+++.||
T Consensus 100 H-~aqVNtV~fNees-----SVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtyd 171 (307)
T KOG0316|consen 100 H-LAQVNTVRFNEES-----SVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYD 171 (307)
T ss_pred c-cceeeEEEecCcc-----eEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEE
Confidence 9 9999999999988 7999999999999999854 57889998888999999887 45899999999999999
Q ss_pred ccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcc--eEEeeec-CCCeEEEEeCCCc
Q 019326 159 LVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKR--ILCAAPG-ENGVLFTGGEDRS 233 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~--i~~~~~~-~~~~l~~~~~dg~ 233 (343)
++.|+. ..-.+.++|++++|+++++..+++ -++.+++.|-.+++++..++ |... -...++. ....+++|++||.
T Consensus 172 iR~G~l-~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~ 250 (307)
T KOG0316|consen 172 IRKGTL-SSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGK 250 (307)
T ss_pred eeccee-ehhhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCce
Confidence 999874 344567899999999999998888 99999999999999998887 3222 2233343 4679999999999
Q ss_pred EEEEECCCCceeEEeccccccc-EEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 234 ITAWDTNSGKVAYCIEDAHSAR-VKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 234 i~i~d~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
|++||+.....+..+. .|... |.++.++|... -++++. ++.+..|--+
T Consensus 251 Vy~wdLvd~~~~sk~~-~~~~v~v~dl~~hp~~~---------~f~~A~-~~~~~~~~~~ 299 (307)
T KOG0316|consen 251 VYFWDLVDETQISKLS-VVSTVIVTDLSCHPTMD---------DFITAT-GHGDLFWYQE 299 (307)
T ss_pred EEEEEeccceeeeeec-cCCceeEEeeecccCcc---------ceeEec-CCceeceeeh
Confidence 9999999999999998 77766 89999999887 555554 3456666543
No 50
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=100.00 E-value=1.2e-33 Score=243.51 Aligned_cols=261 Identities=20% Similarity=0.278 Sum_probs=228.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEE-ecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFS-YPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
.+++|+.+++|++|+... ...+.. +.||.+.|.++++. ++.+++|+.|.++++||..++++...+
T Consensus 220 ~~~~~s~~~tl~~~~~~~------------~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l 287 (537)
T KOG0274|consen 220 FFKSGSDDSTLHLWDLNN------------GYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSL 287 (537)
T ss_pred eEEecCCCceeEEeeccc------------ceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEe
Confidence 477999999999999987 344444 88999999999999 999999999999999999999999999
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
.+| ...|.++...+. .+++|+.|.+|++|++.+++++..+.+|.++|.++..+ +.++++|+.|++|++||
T Consensus 288 ~gh-~stv~~~~~~~~-------~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~ 357 (537)
T KOG0274|consen 288 QGH-TSSVRCLTIDPF-------LLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWD 357 (537)
T ss_pred cCC-CceEEEEEccCc-------eEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEE
Confidence 999 999999988753 68889999999999999999999999999999999998 67999999999999999
Q ss_pred ccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc-eeEEEecCCcc-eEEeeecCCCeEEEEeCCCcE
Q 019326 159 LVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA-KLLCELDGKKR-ILCAAPGENGVLFTGGEDRSI 234 (343)
Q Consensus 159 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~-~~~~~~~~~~~-i~~~~~~~~~~l~~~~~dg~i 234 (343)
+.+++++.... +...|.++.+.+. ..++.+ .|+.|++||+++. +++..+.++.. +..+.+ .+++|++++.|+.|
T Consensus 358 ~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~-~~~~Lvs~~aD~~I 435 (537)
T KOG0274|consen 358 PRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL-RDNFLVSSSADGTI 435 (537)
T ss_pred hhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc-ccceeEeccccccE
Confidence 99999887655 4577888877766 777777 8999999999999 89888885544 444444 78899999999999
Q ss_pred EEEECCCCceeEEeccc-ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccC
Q 019326 235 TAWDTNSGKVAYCIEDA-HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEK 298 (343)
Q Consensus 235 ~i~d~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 298 (343)
++||..+++++..+. + |...|..+++. .. .+++++.||++++||++++....
T Consensus 436 k~WD~~~~~~~~~~~-~~~~~~v~~l~~~--~~---------~il~s~~~~~~~l~dl~~~~~~~ 488 (537)
T KOG0274|consen 436 KLWDAEEGECLRTLE-GRHVGGVSALALG--KE---------EILCSSDDGSVKLWDLRSGTLIR 488 (537)
T ss_pred EEeecccCceeeeec-cCCcccEEEeecC--cc---------eEEEEecCCeeEEEecccCchhh
Confidence 999999999999999 5 67888888876 22 79999999999999999986443
No 51
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.2e-34 Score=237.03 Aligned_cols=256 Identities=14% Similarity=0.209 Sum_probs=226.1
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
++++-++|.|.||+.++ ...+..+.-..-||.+..|- .+++++|+.|..||||+..+++.+..|..
T Consensus 28 ~la~LynG~V~IWnyet------------qtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeA 95 (794)
T KOG0276|consen 28 ILAALYNGDVQIWNYET------------QTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEA 95 (794)
T ss_pred EEEeeecCeeEEEeccc------------ceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeec
Confidence 57788999999999998 56667777788999999998 78999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC-CcceeeeeeeccccEEEEEEecC-CCEEEEEeCCCeEEEEE
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD-PFVLLTSVKVHKKGVNDLAVHHS-GKLALTVGRDDCLAMVN 158 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~~~d~~i~~wd 158 (343)
| ...|.+++.+|.. .++++++.|-+|++||.+ .+.+.+++.+|...|.+++|+|. .+.+++++-|++|++|.
T Consensus 96 H-~DyIR~iavHPt~-----P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWs 169 (794)
T KOG0276|consen 96 H-SDYIRSIAVHPTL-----PYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWS 169 (794)
T ss_pred c-ccceeeeeecCCC-----CeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEE
Confidence 9 9999999999998 899999999999999995 46789999999999999999995 58999999999999999
Q ss_pred ccCCceeEEEE-cCCcceEEEEeCCC--CEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecCC-CeEEEEeCCC
Q 019326 159 LVRGRRSFYHK-IGKEASLIKFDGSG--EKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGEN-GVLFTGGEDR 232 (343)
Q Consensus 159 ~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~dg 232 (343)
+.+..+.+... +...|+++.+-+.| .+++++ .|..+++||.++..+++++. |...|..++|++. ..+++|++||
T Consensus 170 lgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDG 249 (794)
T KOG0276|consen 170 LGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDG 249 (794)
T ss_pred cCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCc
Confidence 98887766554 45789999998755 688888 89999999999999999998 8889999999976 6999999999
Q ss_pred cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcE
Q 019326 233 SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVI 286 (343)
Q Consensus 233 ~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i 286 (343)
+++||+..+-+...++. -...++++++..+.+. .++.|...|.|
T Consensus 250 TvriWhs~Ty~lE~tLn-~gleRvW~I~~~k~~~---------~i~vG~Deg~i 293 (794)
T KOG0276|consen 250 TVRIWNSKTYKLEKTLN-YGLERVWCIAAHKGDG---------KIAVGFDEGSV 293 (794)
T ss_pred cEEEecCcceehhhhhh-cCCceEEEEeecCCCC---------eEEEeccCCcE
Confidence 99999999888877777 6678899998877765 56666555544
No 52
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=9.3e-33 Score=255.55 Aligned_cols=268 Identities=14% Similarity=0.156 Sum_probs=214.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
.|++|+.|+.|+||+....... ... ...+...+. +...|.+++|+ +.+|++++.||.|++||+.+++.+..+
T Consensus 497 ~latgg~D~~I~iwd~~~~~~~---~~~-~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~ 571 (793)
T PLN00181 497 FFATAGVNKKIKIFECESIIKD---GRD-IHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEM 571 (793)
T ss_pred EEEEEeCCCEEEEEECCccccc---ccc-cccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 3789999999999997641100 000 011223333 35689999997 689999999999999999999999999
Q ss_pred ccCCCCCeEEEEEeC-CCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEe-cCCCEEEEEeCCCeEEE
Q 019326 79 HHHESSSVTSLAFYT-PQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVH-HSGKLALTVGRDDCLAM 156 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~~~~~d~~i~~ 156 (343)
.+| ...|++++|+| ++ .+|++|+.||+|++||+++++.+..+..+ ..|.++.|+ +++.+|++|+.||.|++
T Consensus 572 ~~H-~~~V~~l~~~p~~~-----~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~i 644 (793)
T PLN00181 572 KEH-EKRVWSIDYSSADP-----TLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYY 644 (793)
T ss_pred cCC-CCCEEEEEEcCCCC-----CEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEE
Confidence 999 89999999997 45 79999999999999999998888888754 678999995 46899999999999999
Q ss_pred EEccCCce-e-EEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc------eeEEEec-CCcceEEeeec-CCCeE
Q 019326 157 VNLVRGRR-S-FYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA------KLLCELD-GKKRILCAAPG-ENGVL 225 (343)
Q Consensus 157 wd~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~------~~~~~~~-~~~~i~~~~~~-~~~~l 225 (343)
||+++.+. . ....+...+..+.|. ++..++++ .|+.|++||++.. ..+..+. |...+.++.++ ++.+|
T Consensus 645 wD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~l 723 (793)
T PLN00181 645 YDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYI 723 (793)
T ss_pred EECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEE
Confidence 99987653 2 233455788999997 66777777 8999999999743 4566665 67778889888 46799
Q ss_pred EEEeCCCcEEEEECCCCceeEEec------------ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 226 FTGGEDRSITAWDTNSGKVAYCIE------------DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 226 ~~~~~dg~i~i~d~~~~~~~~~~~------------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
++|+.|+.|++|+.....++..+. ..|...|.+++|++++. +|++|+.||.|+||++
T Consensus 724 asgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~---------~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 724 ATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSS---------TLVAANSTGNIKILEM 792 (793)
T ss_pred EEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCC---------eEEEecCCCcEEEEec
Confidence 999999999999987665443221 13556799999999887 9999999999999986
No 53
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=6.8e-34 Score=221.78 Aligned_cols=279 Identities=19% Similarity=0.270 Sum_probs=229.1
Q ss_pred CCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC
Q 019326 40 AHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP 119 (343)
Q Consensus 40 ~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 119 (343)
.|.+.|.++...+..+++|++||.+++||.. |+....+.+| .++|.+++|.-... ....|++++.|.++++|..+.
T Consensus 103 ~hdDWVSsv~~~~~~IltgsYDg~~riWd~~-Gk~~~~~~Gh-t~~ik~v~~v~~n~--~~~~fvsas~Dqtl~Lw~~~~ 178 (423)
T KOG0313|consen 103 LHDDWVSSVKGASKWILTGSYDGTSRIWDLK-GKSIKTIVGH-TGPIKSVAWVIKNS--SSCLFVSASMDQTLRLWKWNV 178 (423)
T ss_pred cchhhhhhhcccCceEEEeecCCeeEEEecC-CceEEEEecC-CcceeeeEEEecCC--ccceEEEecCCceEEEEEecC
Confidence 4889999988889999999999999999976 8899999999 99999888875541 124699999999999999876
Q ss_pred cce----eeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc--------------------------eeEEEE
Q 019326 120 FVL----LTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR--------------------------RSFYHK 169 (343)
Q Consensus 120 ~~~----~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~--------------------------~~~~~~ 169 (343)
++. +...++|...|-+++..+++..+++|+.|.+|.+|+..+.. .+....
T Consensus 179 ~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~G 258 (423)
T KOG0313|consen 179 GENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEG 258 (423)
T ss_pred chhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecc
Confidence 543 34445999999999999999999999999999999932110 112233
Q ss_pred cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCc---e
Q 019326 170 IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGK---V 244 (343)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~---~ 244 (343)
+..+|..+.|++. ..++++ .|.+|+.||+.++.....+..+..++|+..++ .++|++|+.|..|++||.+++. .
T Consensus 259 Ht~~Vs~V~w~d~-~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v 337 (423)
T KOG0313|consen 259 HTEPVSSVVWSDA-TVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVV 337 (423)
T ss_pred cccceeeEEEcCC-CceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCcee
Confidence 4578899999994 445555 99999999999999999999999999999985 5799999999999999998764 4
Q ss_pred eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccccc-ccccceeEEEcCCCCcee
Q 019326 245 AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEA-KTNSRLTCLAGSSTKSFK 323 (343)
Q Consensus 245 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~~ 323 (343)
..++. +|...|.++.|+|... ++|++++.|+++++||+++.. .|+..+ .+..+|.++.|. .+.++
T Consensus 338 ~~s~~-gH~nwVssvkwsp~~~--------~~~~S~S~D~t~klWDvRS~k----~plydI~~h~DKvl~vdW~-~~~~I 403 (423)
T KOG0313|consen 338 SQSLI-GHKNWVSSVKWSPTNE--------FQLVSGSYDNTVKLWDVRSTK----APLYDIAGHNDKVLSVDWN-EGGLI 403 (423)
T ss_pred EEeee-cchhhhhheecCCCCc--------eEEEEEecCCeEEEEEeccCC----CcceeeccCCceEEEEecc-CCceE
Confidence 45676 9999999999999876 489999999999999999853 133332 446789999995 45678
Q ss_pred ccccCCCCCCCccc
Q 019326 324 RPQIGDSAPKGEEK 337 (343)
Q Consensus 324 ~~~~~~~~~~~~~~ 337 (343)
+.|..|.+++..+-
T Consensus 404 vSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 404 VSGGADNKLRIFKG 417 (423)
T ss_pred EeccCcceEEEecc
Confidence 88999988776543
No 54
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.4e-34 Score=244.71 Aligned_cols=244 Identities=15% Similarity=0.193 Sum_probs=208.7
Q ss_pred EeEEec-CCCCCeEEEEec--CceEEEeeCCCeEEEEEcCC---------------------------------------
Q 019326 34 QLFSYP-AHLSPITTVAVS--GTAAASGGTDDTIHLYDLST--------------------------------------- 71 (343)
Q Consensus 34 ~~~~~~-~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~--------------------------------------- 71 (343)
..+.+. +|.+.|.++.|+ |.+||+||.|+.|+||.+..
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s 337 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS 337 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence 345556 899999999999 99999999999999998753
Q ss_pred ---------------------CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecc
Q 019326 72 ---------------------SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHK 130 (343)
Q Consensus 72 ---------------------~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 130 (343)
.++++.|.+| .+.|..|.|+.++ +|++++.|.+|++|++...+++..|. |.
T Consensus 338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GH-t~DILDlSWSKn~------fLLSSSMDKTVRLWh~~~~~CL~~F~-Hn 409 (712)
T KOG0283|consen 338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGH-TADILDLSWSKNN------FLLSSSMDKTVRLWHPGRKECLKVFS-HN 409 (712)
T ss_pred ccccccCCccccCCCccccccccchhhhhcc-chhheecccccCC------eeEeccccccEEeecCCCcceeeEEe-cC
Confidence 1234566788 9999999999887 99999999999999999999999998 99
Q ss_pred ccEEEEEEec-CCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEe
Q 019326 131 KGVNDLAVHH-SGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCEL 208 (343)
Q Consensus 131 ~~v~~i~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~ 208 (343)
..|+|++|+| |.++|++|+-|+.|+||++...+.+.......-|++++|.|+|+..+++ .+|.+++|+....+.....
T Consensus 410 dfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~ 489 (712)
T KOG0283|consen 410 DFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDF 489 (712)
T ss_pred CeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEee
Confidence 9999999999 5699999999999999999999988888889999999999999999999 9999999999988776655
Q ss_pred c---C------CcceEEeeecCC--CeEEEEeCCCcEEEEECCCCceeEEecccccc-cEEEEEEEecCCCCCCCCCCeE
Q 019326 209 D---G------KKRILCAAPGEN--GVLFTGGEDRSITAWDTNSGKVAYCIEDAHSA-RVKGIVVLTKNDGGSTAENPYL 276 (343)
Q Consensus 209 ~---~------~~~i~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~~~~ 276 (343)
. + ...|+.+.+.++ ..+++.+.|..|+|||.++..++..++..+.. .-....|+.++. +
T Consensus 490 ~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk---------~ 560 (712)
T KOG0283|consen 490 HIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGK---------H 560 (712)
T ss_pred eEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCC---------E
Confidence 3 1 237999999854 35788889999999999988888888833322 224455666666 9
Q ss_pred EEEEcCCCcEEEEeccCc
Q 019326 277 VASASSDGVICVWDVRMA 294 (343)
Q Consensus 277 l~s~~~dg~i~vwd~~~~ 294 (343)
|+++++|..|++|++...
T Consensus 561 IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 561 IVSASEDSWVYIWKNDSF 578 (712)
T ss_pred EEEeecCceEEEEeCCCC
Confidence 999999999999998543
No 55
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=2.7e-35 Score=225.77 Aligned_cols=268 Identities=20% Similarity=0.265 Sum_probs=231.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.||.|.+|+..+++. .+.++++....+--+..+|.|+.|+ ..+||+|+.||.|++|.+.+|.+++.|.
T Consensus 227 yLvsgSvDGFiEVWny~~GKl----rKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFd 302 (508)
T KOG0275|consen 227 YLVSGSVDGFIEVWNYTTGKL----RKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFD 302 (508)
T ss_pred eEeeccccceeeeehhccchh----hhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhh
Confidence 479999999999999987432 2345556666667789999999999 7899999999999999999999999998
Q ss_pred -cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 80 -HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 80 -~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
.| ...|+|+.|+.++ ..+++++.|.++++--++.++++..+++|...|+...|.++|.++++++.||+|++|+
T Consensus 303 rAH-tkGvt~l~FSrD~-----SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~ 376 (508)
T KOG0275|consen 303 RAH-TKGVTCLSFSRDN-----SQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWH 376 (508)
T ss_pred hhh-ccCeeEEEEccCc-----chhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEec
Confidence 56 9999999999998 7999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceeEEEEcC---CcceEEEEeC-CCCEEEEE-eCCcEEEEEcccceeEEEec----CCcceEEeeec-CCCeEEEE
Q 019326 159 LVRGRRSFYHKIG---KEASLIKFDG-SGEKFFMV-TEEKVGIHQAEDAKLLCELD----GKKRILCAAPG-ENGVLFTG 228 (343)
Q Consensus 159 ~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~-~~~~i~~~d~~~~~~~~~~~----~~~~i~~~~~~-~~~~l~~~ 228 (343)
..+.+++..+... .++..+-.-| +...++++ ..+++.+.++. ++.++.+. ..+...+.+.+ .+.++++.
T Consensus 377 ~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYci 455 (508)
T KOG0275|consen 377 GKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCI 455 (508)
T ss_pred CcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEE
Confidence 9999987766543 4566666666 45577777 78888888865 56777776 23445555555 57899999
Q ss_pred eCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 229 GEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 229 ~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
++|+.++.|...+|+...++. -|...|.+++-+|..+ .|++-++||.+++|.
T Consensus 456 gED~vlYCF~~~sG~LE~tl~-VhEkdvIGl~HHPHqN---------llAsYsEDgllKLWk 507 (508)
T KOG0275|consen 456 GEDGVLYCFSVLSGKLERTLP-VHEKDVIGLTHHPHQN---------LLASYSEDGLLKLWK 507 (508)
T ss_pred ccCcEEEEEEeecCceeeeee-cccccccccccCcccc---------hhhhhcccchhhhcC
Confidence 999999999999999999999 9999999999999887 999999999999995
No 56
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-33 Score=242.44 Aligned_cols=261 Identities=15% Similarity=0.179 Sum_probs=227.4
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
++++-..|.|++||.+- ...+..|..|.+||..++|+ +.++++|+.|-.|++|+.++.+++.++.+
T Consensus 24 ILtslHsG~IQlWDYRM------------~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~G 91 (1202)
T KOG0292|consen 24 ILTSLHSGVIQLWDYRM------------GTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLG 91 (1202)
T ss_pred EEEeecCceeeeehhhh------------hhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhcc
Confidence 57888899999999987 57788899999999999999 88999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
| -..|..+.|++.- .++++++.|-+|+||+..+++++..+.+|...|.|..|+|....+++++-|.+|++||+.
T Consensus 92 H-lDYVRt~~FHhey-----PWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDis 165 (1202)
T KOG0292|consen 92 H-LDYVRTVFFHHEY-----PWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDIS 165 (1202)
T ss_pred c-cceeEEeeccCCC-----ceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeec
Confidence 9 9999999999998 899999999999999999999999999999999999999999999999999999999985
Q ss_pred CCcee---------------------------E---EEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEe-
Q 019326 161 RGRRS---------------------------F---YHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCEL- 208 (343)
Q Consensus 161 ~~~~~---------------------------~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~- 208 (343)
.-+.. . ...+...|+-++|+|.-..++++ .|..|++|.+...+....-
T Consensus 166 GLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDt 245 (1202)
T KOG0292|consen 166 GLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT 245 (1202)
T ss_pred chhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehh
Confidence 32110 0 01123557889999999999999 8999999998876644332
Q ss_pred --cCCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCc
Q 019326 209 --DGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGV 285 (343)
Q Consensus 209 --~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~ 285 (343)
.|..+|.++-|++ .+++++.++|++|++||+...+.++++. ...+.-+.++.+|..+ |.+++.|+-
T Consensus 246 crgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfr-rendRFW~laahP~lN----------LfAAgHDsG 314 (1202)
T KOG0292|consen 246 CRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFR-RENDRFWILAAHPELN----------LFAAGHDSG 314 (1202)
T ss_pred hhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeee-ccCCeEEEEEecCCcc----------eeeeecCCc
Confidence 2889999999985 5799999999999999999999999998 5567889999999885 555556776
Q ss_pred EEEEecc
Q 019326 286 ICVWDVR 292 (343)
Q Consensus 286 i~vwd~~ 292 (343)
+.||.++
T Consensus 315 m~VFkle 321 (1202)
T KOG0292|consen 315 MIVFKLE 321 (1202)
T ss_pred eEEEEEc
Confidence 7777776
No 57
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=6.9e-35 Score=233.94 Aligned_cols=284 Identities=16% Similarity=0.165 Sum_probs=233.9
Q ss_pred eeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCC-CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEe
Q 019326 31 TLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLST-SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFST 106 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~ 106 (343)
+.+.++++.||...|+++.|. +.+|++++.|+.|+||++.. +++++++.+| ..+|.+++|++.+ ..++++
T Consensus 203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH-~k~Vrd~~~s~~g-----~~fLS~ 276 (503)
T KOG0282|consen 203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGH-RKPVRDASFNNCG-----TSFLSA 276 (503)
T ss_pred cHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcc-hhhhhhhhccccC-----Ceeeee
Confidence 445678899999999999998 78999999999999999987 8999999999 9999999999999 899999
Q ss_pred eCCCeEEEEECCCcceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEEEcC-CcceEEEEeCCCC
Q 019326 107 SADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHKIG-KEASLIKFDGSGE 184 (343)
Q Consensus 107 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~ 184 (343)
+.|+.|++||+++|+++..+. ....+.++.|+|++ +.+++|+.|+.|+.||+++++.+...... +.+..+.|-+++.
T Consensus 277 sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~ 355 (503)
T KOG0282|consen 277 SFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGR 355 (503)
T ss_pred ecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCc
Confidence 999999999999999999987 45678999999998 89999999999999999999976655443 7899999999999
Q ss_pred EEEEE-eCCcEEEEEcccceeEEEec--CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCc---eeEEecccccc--c
Q 019326 185 KFFMV-TEEKVGIHQAEDAKLLCELD--GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGK---VAYCIEDAHSA--R 255 (343)
Q Consensus 185 ~~~~~-~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~h~~--~ 255 (343)
+++++ .++.+++|+.+..-.++... ......|+..+ .++++++-+.|+.|.+|.+...- ....+. +|.. .
T Consensus 356 rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~fe-Gh~vaGy 434 (503)
T KOG0282|consen 356 RFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFE-GHSVAGY 434 (503)
T ss_pred eEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhc-ceeccCc
Confidence 99999 89999999999887776554 33345566666 46799999999999999876432 233455 7753 4
Q ss_pred EEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCc-eeccccCCCCCCC
Q 019326 256 VKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKS-FKRPQIGDSAPKG 334 (343)
Q Consensus 256 v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~~~~~~~~~~~~~ 334 (343)
-..+.|+|++. +|++|+.||.+.+||.++.+.....+ .+ ...+..+.|.|... -++.+.-+|.++.
T Consensus 435 s~~v~fSpDG~---------~l~SGdsdG~v~~wdwkt~kl~~~lk---ah-~~~ci~v~wHP~e~Skvat~~w~G~Iki 501 (503)
T KOG0282|consen 435 SCQVDFSPDGR---------TLCSGDSDGKVNFWDWKTTKLVSKLK---AH-DQPCIGVDWHPVEPSKVATCGWDGLIKI 501 (503)
T ss_pred eeeEEEcCCCC---------eEEeecCCccEEEeechhhhhhhccc---cC-CcceEEEEecCCCcceeEecccCceeEe
Confidence 56678888887 99999999999999999875333222 22 46788999998743 4555556666654
Q ss_pred c
Q 019326 335 E 335 (343)
Q Consensus 335 ~ 335 (343)
+
T Consensus 502 w 502 (503)
T KOG0282|consen 502 W 502 (503)
T ss_pred c
Confidence 3
No 58
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1e-33 Score=223.23 Aligned_cols=290 Identities=15% Similarity=0.141 Sum_probs=235.6
Q ss_pred ceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC---eeeeEeccCCCCCeEEEEEeCCCCCCCCceE
Q 019326 29 TLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS---SSLGAIHHHESSSVTSLAFYTPQNLSVPRNL 103 (343)
Q Consensus 29 ~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l 103 (343)
..+.+..+.+..|.+.|.-+.|+ |.+||+++.|.+..+|.+... +...++.+| ..+|..+.|+|+. ++|
T Consensus 211 qip~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh-~~~V~yi~wSPDd-----ryL 284 (519)
T KOG0293|consen 211 QIPSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGH-SQPVSYIMWSPDD-----RYL 284 (519)
T ss_pred cCCchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecc-cCceEEEEECCCC-----CeE
Confidence 44566677788999999999999 999999999999999988654 447788899 9999999999999 899
Q ss_pred EEeeCCCeEEEEECCCcceeeeeee-ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-CCcceEEEEeC
Q 019326 104 FSTSADGFVSIFDADPFVLLTSVKV-HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-GKEASLIKFDG 181 (343)
Q Consensus 104 ~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~ 181 (343)
++++.|..+.+||..++.+...+.. +...+.+++|.|||..+++|+.|+++..||+.....-.-... ...+..+++.+
T Consensus 285 laCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~ 364 (519)
T KOG0293|consen 285 LACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITY 364 (519)
T ss_pred EecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcC
Confidence 9999999999999999998887763 457899999999999999999999999999976542221111 25688999999
Q ss_pred CCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEE--
Q 019326 182 SGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVK-- 257 (343)
Q Consensus 182 ~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~-- 257 (343)
+|+++++. .|..+++|+.++......+..+.+|++++.+ +++++++.-.+..+++||+.....+..+. +|...-.
T Consensus 365 Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~-Ghkq~~fiI 443 (519)
T KOG0293|consen 365 DGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYF-GHKQGHFII 443 (519)
T ss_pred CCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhh-cccccceEE
Confidence 99999988 9999999999988777777788999999999 56788888899999999999888888888 8875433
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCce-eccccCCCCCCCcc
Q 019326 258 GIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSF-KRPQIGDSAPKGEE 336 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-~~~~~~~~~~~~~~ 336 (343)
.-+|-..+ ..++++||+|+.|+||+..+++. ......+ ...|+|++|+|.... +++++.|++++.+.
T Consensus 444 rSCFgg~~--------~~fiaSGSED~kvyIWhr~sgkl---l~~LsGH-s~~vNcVswNP~~p~m~ASasDDgtIRIWg 511 (519)
T KOG0293|consen 444 RSCFGGGN--------DKFIASGSEDSKVYIWHRISGKL---LAVLSGH-SKTVNCVSWNPADPEMFASASDDGTIRIWG 511 (519)
T ss_pred EeccCCCC--------cceEEecCCCceEEEEEccCCce---eEeecCC-cceeeEEecCCCCHHHhhccCCCCeEEEec
Confidence 33343332 22999999999999999998752 2222233 356999999997664 56666777766554
Q ss_pred c
Q 019326 337 K 337 (343)
Q Consensus 337 ~ 337 (343)
.
T Consensus 512 ~ 512 (519)
T KOG0293|consen 512 P 512 (519)
T ss_pred C
Confidence 3
No 59
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.9e-33 Score=223.36 Aligned_cols=281 Identities=20% Similarity=0.203 Sum_probs=242.7
Q ss_pred eEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEe------------------ccCCCCCeEEEEEeCC
Q 019326 35 LFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAI------------------HHHESSSVTSLAFYTP 94 (343)
Q Consensus 35 ~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~------------------~~~~~~~v~~l~~~~~ 94 (343)
...+..|.-+|+|++++ +.+.++++.+|+|.-|++.+++....+ ..| ...+.+++.+++
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h-~keil~~avS~D 213 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGH-VKEILTLAVSSD 213 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccc-cceeEEEEEcCC
Confidence 56667899999999999 779999999999999999888633100 145 788999999999
Q ss_pred CCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCcee-EEEEcCCc
Q 019326 95 QNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRS-FYHKIGKE 173 (343)
Q Consensus 95 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~~~~~ 173 (343)
+ ++|++|+.|..|.||+.++.+.++.+.+|.+.|.+++|-.....+++++.|+++++|++.....+ ..+.++..
T Consensus 214 g-----kylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~ 288 (479)
T KOG0299|consen 214 G-----KYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDG 288 (479)
T ss_pred C-----cEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccc
Confidence 9 89999999999999999999999999999999999999998899999999999999999876543 34556677
Q ss_pred ceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccc
Q 019326 174 ASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAH 252 (343)
Q Consensus 174 ~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h 252 (343)
|..+....-++.+.++ .|.++++|++.....+....+.+.+-|++|-++..+++|+.+|.|.+|++.+.+++.+...+|
T Consensus 289 v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AH 368 (479)
T KOG0299|consen 289 VLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAH 368 (479)
T ss_pred eeeechhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccc
Confidence 8888877777777777 899999999976666666668889999999999999999999999999999999998877566
Q ss_pred c-----------ccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCc
Q 019326 253 S-----------ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKS 321 (343)
Q Consensus 253 ~-----------~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 321 (343)
. ..|++++..+..+ ++++|+.+|.|++|.+..+.. ...++......+.|++++|+++++
T Consensus 369 gv~~~~~~~~~~~Witsla~i~~sd---------L~asGS~~G~vrLW~i~~g~r-~i~~l~~ls~~GfVNsl~f~~sgk 438 (479)
T KOG0299|consen 369 GVIPELDPVNGNFWITSLAVIPGSD---------LLASGSWSGCVRLWKIEDGLR-AINLLYSLSLVGFVNSLAFSNSGK 438 (479)
T ss_pred cccCCccccccccceeeeEecccCc---------eEEecCCCCceEEEEecCCcc-ccceeeecccccEEEEEEEccCCC
Confidence 3 2789999999988 999999999999999998732 334566777888999999999999
Q ss_pred eeccccCCCC
Q 019326 322 FKRPQIGDSA 331 (343)
Q Consensus 322 ~~~~~~~~~~ 331 (343)
+++++.+++.
T Consensus 439 ~ivagiGkEh 448 (479)
T KOG0299|consen 439 RIVAGIGKEH 448 (479)
T ss_pred EEEEeccccc
Confidence 9999988874
No 60
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-34 Score=212.90 Aligned_cols=281 Identities=16% Similarity=0.160 Sum_probs=248.3
Q ss_pred EEecCCCCCeEEEEec-----CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC
Q 019326 36 FSYPAHLSPITTVAVS-----GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG 110 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~-----~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg 110 (343)
.+..||..||..++|+ |-+|++++.||.-.+-+-++|.-+.+|.+| .+.|++.....+. ...++++.|-
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfegh-kgavw~~~l~~na-----~~aasaaadf 81 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGH-KGAVWSATLNKNA-----TRAASAAADF 81 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeecc-CcceeeeecCchh-----hhhhhhcccc
Confidence 3456999999999998 678999999999999999999999999999 9999999998887 6888999999
Q ss_pred eEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeE--EEEcCCcceEEEEeCCCCEEEE
Q 019326 111 FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF--YHKIGKEASLIKFDGSGEKFFM 188 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 188 (343)
+-++||.-++..+.++. |+..|..++|+.|.++|++|+.+..+++||++..+... ...+...|..+.|....+.+++
T Consensus 82 takvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLS 160 (334)
T KOG0278|consen 82 TAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILS 160 (334)
T ss_pred hhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEe
Confidence 99999999999999988 99999999999999999999999999999998765332 3345678889999998898888
Q ss_pred E-eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCC
Q 019326 189 V-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDG 267 (343)
Q Consensus 189 ~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 267 (343)
+ .++.|++||.++++.++.+..+.+|+++..+.++.+++-...+.|.+||..+...++.+. -...|.+..++|+..
T Consensus 161 Sadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k--~P~nV~SASL~P~k~- 237 (334)
T KOG0278|consen 161 SADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYK--MPCNVESASLHPKKE- 237 (334)
T ss_pred eccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEeccccccceeecc--CccccccccccCCCc-
Confidence 7 999999999999999999999999999999977777777788899999999999999887 667788888999886
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 268 GSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 268 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
.+++|++|..++.||..++..... ....+.++|.|+.|+|+|.+-+.|++|+.++.+..
T Consensus 238 --------~fVaGged~~~~kfDy~TgeEi~~---~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt 296 (334)
T KOG0278|consen 238 --------FFVAGGEDFKVYKFDYNTGEEIGS---YNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQT 296 (334)
T ss_pred --------eEEecCcceEEEEEeccCCceeee---cccCCCCceEEEEECCCCceeeccCCCceEEEEEe
Confidence 999999999999999999853322 23456678999999999999999999998776543
No 61
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=7.3e-33 Score=222.65 Aligned_cols=258 Identities=17% Similarity=0.189 Sum_probs=225.6
Q ss_pred CeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeE
Q 019326 10 KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVT 87 (343)
Q Consensus 10 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 87 (343)
-.+.+|+..+ .....++...+..|.++.|. |.+||+|+..|.|+++|..+...++.+..| +.+|.
T Consensus 48 ~rvqly~~~~------------~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah-~apv~ 114 (487)
T KOG0310|consen 48 VRVQLYSSVT------------RSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAH-QAPVH 114 (487)
T ss_pred cEEEEEecch------------hhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhc-cCcee
Confidence 4678888776 23333344456789999998 999999999999999997776678889999 99999
Q ss_pred EEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCC-cee
Q 019326 88 SLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRG-RRS 165 (343)
Q Consensus 88 ~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~-~~~ 165 (343)
.+.|+|.++ ..|++|+.|+.+++||+.+......+.+|++.|.+.+|+|.. .++++|+.||.|++||++.. ..+
T Consensus 115 ~~~f~~~d~----t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v 190 (487)
T KOG0310|consen 115 VTKFSPQDN----TMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRV 190 (487)
T ss_pred EEEecccCC----eEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCcee
Confidence 999999984 789999999999999999988766899999999999999964 58999999999999999988 778
Q ss_pred EEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccc-eeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCC
Q 019326 166 FYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDA-KLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSG 242 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~ 242 (343)
....++.+|..+.+-|.|..++++..+.+++||+.+| +.+..+. |...|+|+.+. ++..|++|+-|+.+++||+.+.
T Consensus 191 ~elnhg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~ 270 (487)
T KOG0310|consen 191 VELNHGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY 270 (487)
T ss_pred EEecCCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccce
Confidence 8899999999999999999999999999999999954 4444444 99999999997 5689999999999999999989
Q ss_pred ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 243 KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 243 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+.+..+. -.++|.+++++|+++ .++.|..||.+.+=+....+
T Consensus 271 Kvv~s~~--~~~pvLsiavs~dd~---------t~viGmsnGlv~~rr~~~k~ 312 (487)
T KOG0310|consen 271 KVVHSWK--YPGPVLSIAVSPDDQ---------TVVIGMSNGLVSIRRREVKK 312 (487)
T ss_pred EEEEeee--cccceeeEEecCCCc---------eEEEecccceeeeehhhccc
Confidence 9998887 889999999999887 99999999998887655543
No 62
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-32 Score=203.06 Aligned_cols=241 Identities=16% Similarity=0.196 Sum_probs=209.3
Q ss_pred EecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 37 SYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 37 ~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
.++||..+++.+.|+ |++|.+++.|....+|-..+|+.+.++.+| .+.|+|+....+. +.+++|+.|.++++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GH-tGavW~~Did~~s-----~~liTGSAD~t~kL 78 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGH-TGAVWCCDIDWDS-----KHLITGSADQTAKL 78 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCC-CceEEEEEecCCc-----ceeeeccccceeEE
Confidence 356999999999999 999999999999999999999999999999 9999999999888 89999999999999
Q ss_pred EECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC-----CCeEEEEEccC-------CceeE-EEEcCCcceEEEEeC
Q 019326 115 FDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-----DDCLAMVNLVR-------GRRSF-YHKIGKEASLIKFDG 181 (343)
Q Consensus 115 wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-----d~~i~~wd~~~-------~~~~~-~~~~~~~~~~~~~~~ 181 (343)
||+++++++..++ ...+|..+.|+++|++++.... .+.|.++|++. .++.. .......+..+-|.|
T Consensus 79 WDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~ 157 (327)
T KOG0643|consen 79 WDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGP 157 (327)
T ss_pred EEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecc
Confidence 9999999999998 5779999999999988877665 46799999983 33233 333447788999999
Q ss_pred CCCEEEEE-eCCcEEEEEcccceeEEEec--CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEec--------
Q 019326 182 SGEKFFMV-TEEKVGIHQAEDAKLLCELD--GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIE-------- 249 (343)
Q Consensus 182 ~~~~~~~~-~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------- 249 (343)
-++.++++ .+|.|..||+++++....-. |...|+.++++ +..++++++.|.+-++||..+.+.++++.
T Consensus 158 l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~a 237 (327)
T KOG0643|consen 158 LGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTA 237 (327)
T ss_pred cCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecccccce
Confidence 99999999 99999999999986655443 88899999999 45799999999999999998754443332
Q ss_pred ----------------------------------------------ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC
Q 019326 250 ----------------------------------------------DAHSARVKGIVVLTKNDGGSTAENPYLVASASSD 283 (343)
Q Consensus 250 ----------------------------------------------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d 283 (343)
.+|-++|++++|+|++. ..+||++|
T Consensus 238 aisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGk---------sYsSGGED 308 (327)
T KOG0643|consen 238 AISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGK---------SYSSGGED 308 (327)
T ss_pred ecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCc---------ccccCCCC
Confidence 47889999999999988 89999999
Q ss_pred CcEEEEeccC
Q 019326 284 GVICVWDVRM 293 (343)
Q Consensus 284 g~i~vwd~~~ 293 (343)
|.||+.-.+.
T Consensus 309 G~VR~h~Fd~ 318 (327)
T KOG0643|consen 309 GYVRLHHFDS 318 (327)
T ss_pred ceEEEEEecc
Confidence 9999987764
No 63
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=100.00 E-value=2.9e-34 Score=226.13 Aligned_cols=282 Identities=18% Similarity=0.226 Sum_probs=241.6
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe--eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS--SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS 107 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~ 107 (343)
....+.+..|.+.|..+.|- ...|++|+.|..|++|+....+ .+..+.+. .+.|+.+.|.+++ ..+++++
T Consensus 165 S~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs-~g~it~~d~d~~~-----~~~iAas 238 (459)
T KOG0288|consen 165 SRALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGS-LGNITSIDFDSDN-----KHVIAAS 238 (459)
T ss_pred hhhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhcc-CCCcceeeecCCC-----ceEEeec
Confidence 34556777899999999998 4899999999999999998766 66777777 8899999999998 7999999
Q ss_pred CCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEE
Q 019326 108 ADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 108 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
.|+.+++|++...+...++.+|.+.|+++.|......+++|+.|.+|+.||+....+....-....+..+..+ ...++
T Consensus 239 ~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~--~~~~~ 316 (459)
T KOG0288|consen 239 NDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCS--ISDVI 316 (459)
T ss_pred CCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccccceEec--ceeee
Confidence 9999999999999999999999999999999887777999999999999999998887776666666666665 45566
Q ss_pred EE-eCCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccc----cccEEEEEE
Q 019326 188 MV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAH----SARVKGIVV 261 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h----~~~v~~~~~ 261 (343)
++ .|++|+.||.++.......+..+.|+++..+ ++..+++++.|.++.+.|+++.+....+. +. ....+.+.|
T Consensus 317 SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~s-A~g~k~asDwtrvvf 395 (459)
T KOG0288|consen 317 SGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFS-AEGFKCASDWTRVVF 395 (459)
T ss_pred ecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEee-ccccccccccceeEE
Confidence 66 8999999999999999999988899999998 56788888999999999999988777765 22 234788999
Q ss_pred EecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCC
Q 019326 262 LTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPK 333 (343)
Q Consensus 262 ~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~ 333 (343)
+|++. |+++||.||.|+||++.+++.++.... ...+..|++++|+|.|..+++...++...
T Consensus 396 Spd~~---------YvaAGS~dgsv~iW~v~tgKlE~~l~~--s~s~~aI~s~~W~~sG~~Llsadk~~~v~ 456 (459)
T KOG0288|consen 396 SPDGS---------YVAAGSADGSVYIWSVFTGKLEKVLSL--STSNAAITSLSWNPSGSGLLSADKQKAVT 456 (459)
T ss_pred CCCCc---------eeeeccCCCcEEEEEccCceEEEEecc--CCCCcceEEEEEcCCCchhhcccCCcceE
Confidence 99988 999999999999999999976654432 23333699999999999999888766543
No 64
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-31 Score=202.96 Aligned_cols=277 Identities=16% Similarity=0.191 Sum_probs=226.8
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA- 108 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~- 108 (343)
+++...++.-.+.|+++.|+ |..|++++.|..+++||..+++.++.+..+ ...+..++|.... ..++.++.
T Consensus 4 ~~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~sk-kyG~~~~~Fth~~-----~~~i~sStk 77 (311)
T KOG1446|consen 4 FRPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSK-KYGVDLACFTHHS-----NTVIHSSTK 77 (311)
T ss_pred cccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecc-cccccEEEEecCC-----ceEEEccCC
Confidence 34445555567899999999 999999999999999999999999999988 8899999998877 56776666
Q ss_pred -CCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEE
Q 019326 109 -DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 109 -dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
|.+|+..++.+.+.++.+.+|...|.+|+.+|-+..+++++.|++|++||++..++....... ....++|+|.|-++|
T Consensus 78 ~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~-~~pi~AfDp~GLifA 156 (311)
T KOG1446|consen 78 EDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLS-GRPIAAFDPEGLIFA 156 (311)
T ss_pred CCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecC-CCcceeECCCCcEEE
Confidence 889999999999999999999999999999999999999999999999999987776555543 345689999999999
Q ss_pred EE-eCCcEEEEEcccc--eeEEEec----CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccE---
Q 019326 188 MV-TEEKVGIHQAEDA--KLLCELD----GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARV--- 256 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~~--~~~~~~~----~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v--- 256 (343)
++ ....|++||++.. .+...+. .....+.+.|+ +|++++.++..+.+++.|.-+|..+.++. .+...-
T Consensus 157 ~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs-~~~~~~~~~ 235 (311)
T KOG1446|consen 157 LANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFS-GYPNAGNLP 235 (311)
T ss_pred EecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEe-eccCCCCcc
Confidence 99 5559999999974 3455554 35778999999 57899999999999999999999888887 554322
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccC
Q 019326 257 KGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIG 328 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~ 328 (343)
.+..|.|+++ ++++|+.||+|.+|+++++.+.. ........++.|+.|.|.-...+.+..
T Consensus 236 ~~a~ftPds~---------Fvl~gs~dg~i~vw~~~tg~~v~---~~~~~~~~~~~~~~fnP~~~mf~sa~s 295 (311)
T KOG1446|consen 236 LSATFTPDSK---------FVLSGSDDGTIHVWNLETGKKVA---VLRGPNGGPVSCVRFNPRYAMFVSASS 295 (311)
T ss_pred eeEEECCCCc---------EEEEecCCCcEEEEEcCCCcEee---EecCCCCCCccccccCCceeeeeecCc
Confidence 4566778777 99999999999999999885322 222224567888888886665555443
No 65
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=3.2e-32 Score=211.47 Aligned_cols=263 Identities=12% Similarity=0.173 Sum_probs=226.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.||+|.-+|.|+||+..+. .....+...-..|.-|.|+ +..|+.|+.||.+-+|.+.++...+.+.
T Consensus 120 lLATGdmsG~v~v~~~stg------------~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~ 187 (399)
T KOG0296|consen 120 LLATGDMSGKVLVFKVSTG------------GEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMS 187 (399)
T ss_pred EEEecCCCccEEEEEcccC------------ceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEec
Confidence 4899999999999999872 2222332345667788888 8899999999999999999988888999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeec-cccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVH-KKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
+| +.++++=.|.|+| +.++++..||+|++||+.+++++..+... .....++.++..+..++.|..++.+++-+
T Consensus 188 Gh-~~~ct~G~f~pdG-----Kr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~ 261 (399)
T KOG0296|consen 188 GH-NSPCTCGEFIPDG-----KRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVN 261 (399)
T ss_pred CC-CCCcccccccCCC-----ceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEc
Confidence 99 9999999999999 89999999999999999999998888743 33667888999999999999999999999
Q ss_pred ccCCceeEEEEc---------CCcceEEE---EeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeE
Q 019326 159 LVRGRRSFYHKI---------GKEASLIK---FDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVL 225 (343)
Q Consensus 159 ~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l 225 (343)
..+++.+..... ...+.++. ++..=.+++++ -||+|.|||+...++.....|+.+|+.+.|.+..+|
T Consensus 262 ~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~t~~l 341 (399)
T KOG0296|consen 262 NGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLNTDYL 341 (399)
T ss_pred cccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcCcchh
Confidence 888887655441 23334444 44455667777 899999999999999999999999999999887899
Q ss_pred EEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 226 FTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 226 ~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
++++.+|.|+.||.++|+.+.++. +|...|.+++++|+.+ +++|+|.|++.+||++.
T Consensus 342 ~t~c~~g~v~~wDaRtG~l~~~y~-GH~~~Il~f~ls~~~~---------~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 342 LTACANGKVRQWDARTGQLKFTYT-GHQMGILDFALSPQKR---------LVVTVSDDNTALVFEVP 398 (399)
T ss_pred eeeccCceEEeeeccccceEEEEe-cCchheeEEEEcCCCc---------EEEEecCCCeEEEEecC
Confidence 999999999999999999999999 9999999999999888 99999999999999875
No 66
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8e-33 Score=237.17 Aligned_cols=271 Identities=16% Similarity=0.213 Sum_probs=233.2
Q ss_pred cCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEE
Q 019326 39 PAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFD 116 (343)
Q Consensus 39 ~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 116 (343)
......|..++|+ ..+++++-..|.|++||.+-+.++..|..| .++|..++|+|.. .++++|+.|-.|++|+
T Consensus 6 EskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeH-dGpVRgv~FH~~q-----plFVSGGDDykIkVWn 79 (1202)
T KOG0292|consen 6 ESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEH-DGPVRGVDFHPTQ-----PLFVSGGDDYKIKVWN 79 (1202)
T ss_pred hcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhcc-CCccceeeecCCC-----CeEEecCCccEEEEEe
Confidence 3456788999999 678999999999999999999999999999 9999999999998 8999999999999999
Q ss_pred CCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcE
Q 019326 117 ADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKV 194 (343)
Q Consensus 117 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i 194 (343)
.++.+++.++.+|-+.|..+.|++.-.++++++.|.+|+||+..+.+++.... +.+-|.|..|+|....++++ -|.+|
T Consensus 80 Yk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTV 159 (1202)
T KOG0292|consen 80 YKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTV 159 (1202)
T ss_pred cccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceE
Confidence 99999999999999999999999999999999999999999999999887665 55889999999999999999 89999
Q ss_pred EEEEccccee----------------------------E-EEec-CCcceEEeeecCC-CeEEEEeCCCcEEEEECCCCc
Q 019326 195 GIHQAEDAKL----------------------------L-CELD-GKKRILCAAPGEN-GVLFTGGEDRSITAWDTNSGK 243 (343)
Q Consensus 195 ~~~d~~~~~~----------------------------~-~~~~-~~~~i~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~ 243 (343)
++||+..-+. + ..+. |...|+-++|++. .++++|++|+.|++|.+..-+
T Consensus 160 RVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetK 239 (1202)
T KOG0292|consen 160 RVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 239 (1202)
T ss_pred EEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecccc
Confidence 9999853110 0 1112 6667888899864 699999999999999987544
Q ss_pred --eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccccc-ccccceeEEEcCCCC
Q 019326 244 --VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEA-KTNSRLTCLAGSSTK 320 (343)
Q Consensus 244 --~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~ 320 (343)
.+-+.. +|...|+++.|+|..+ +++|.|+|++|+|||+.... .+..+ ..+++..+++.+|..
T Consensus 240 aWEvDtcr-gH~nnVssvlfhp~q~---------lIlSnsEDksirVwDm~kRt-----~v~tfrrendRFW~laahP~l 304 (1202)
T KOG0292|consen 240 AWEVDTCR-GHYNNVSSVLFHPHQD---------LILSNSEDKSIRVWDMTKRT-----SVQTFRRENDRFWILAAHPEL 304 (1202)
T ss_pred ceeehhhh-cccCCcceEEecCccc---------eeEecCCCccEEEEeccccc-----ceeeeeccCCeEEEEEecCCc
Confidence 233455 8999999999999887 99999999999999998754 22223 446789999999998
Q ss_pred ceeccccCCC
Q 019326 321 SFKRPQIGDS 330 (343)
Q Consensus 321 ~~~~~~~~~~ 330 (343)
.+.+++-..|
T Consensus 305 NLfAAgHDsG 314 (1202)
T KOG0292|consen 305 NLFAAGHDSG 314 (1202)
T ss_pred ceeeeecCCc
Confidence 8888776655
No 67
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=100.00 E-value=8.9e-34 Score=223.38 Aligned_cols=261 Identities=13% Similarity=0.200 Sum_probs=231.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.|..|++|++... +...+.++.|..++|+.+.|. +..+++++.|+.+++|++...+...++.
T Consensus 189 tlatgg~Dr~Ik~W~v~~~----------k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLs 258 (459)
T KOG0288|consen 189 TLATGGSDRIIKLWNVLGE----------KSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLS 258 (459)
T ss_pred hhhhcchhhhhhhhhcccc----------hhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhc
Confidence 4789999999999999862 145677788889999999999 8899999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
+| ...|+++.|.... ..+++|+.|.+|++||+....+..++. ....+.+|..+ ...++++..|++|++||+
T Consensus 259 GH-tdkVt~ak~~~~~-----~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~--~~~~~SgH~DkkvRfwD~ 329 (459)
T KOG0288|consen 259 GH-TDKVTAAKFKLSH-----SRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS--ISDVISGHFDKKVRFWDI 329 (459)
T ss_pred cc-ccceeeehhhccc-----cceeeccccchhhhhhhhhhheecccc-ccccccceEec--ceeeeecccccceEEEec
Confidence 99 9999999999877 459999999999999999888887765 34566777776 457899999999999999
Q ss_pred cCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-----CCcceEEeeecC-CCeEEEEeCCC
Q 019326 160 VRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-----GKKRILCAAPGE-NGVLFTGGEDR 232 (343)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-----~~~~i~~~~~~~-~~~l~~~~~dg 232 (343)
++..+....+..+.+.++..++++..+.++ .|..+.++|+++......+. .....+.+.|+| +.|+++|+.||
T Consensus 330 Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dg 409 (459)
T KOG0288|consen 330 RSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADG 409 (459)
T ss_pred cCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCC
Confidence 999999999999999999999999999999 99999999999999888776 234578888985 57999999999
Q ss_pred cEEEEECCCCceeEEecccccc-cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 233 SITAWDTNSGKVAYCIEDAHSA-RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 233 ~i~i~d~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
.|+||++.++++...+...+.. .|+++.|+|.+. .|++++.++.+.+|.
T Consensus 410 sv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~---------~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 410 SVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGS---------GLLSADKQKAVTLWT 459 (459)
T ss_pred cEEEEEccCceEEEEeccCCCCcceEEEEEcCCCc---------hhhcccCCcceEecC
Confidence 9999999999999888855554 699999999988 899999999999993
No 68
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=6.6e-32 Score=204.85 Aligned_cols=266 Identities=15% Similarity=0.179 Sum_probs=212.9
Q ss_pred CCCCCeEEEEec---CceEEEeeCCCeEEEEEcCC-CeeeeE-eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 40 AHLSPITTVAVS---GTAAASGGTDDTIHLYDLST-SSSLGA-IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 40 ~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~-~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
...+.|.+|+|+ ..++++++.||+||+|+++. |..+.. ...| .++|.+++|+.++ ..+++|+.|+.+++
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~-~~PvL~v~Wsddg-----skVf~g~~Dk~~k~ 98 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSH-DGPVLDVCWSDDG-----SKVFSGGCDKQAKL 98 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhcc-CCCeEEEEEccCC-----ceEEeeccCCceEE
Confidence 356789999999 57788999999999999987 344433 3456 8999999999999 79999999999999
Q ss_pred EECCCcceeeeeeeccccEEEEEEecCCC--EEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eC
Q 019326 115 FDADPFVLLTSVKVHKKGVNDLAVHHSGK--LALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TE 191 (343)
Q Consensus 115 wd~~~~~~~~~~~~~~~~v~~i~~~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 191 (343)
||+.++ .+..+..|.++|..+.|-+... .|++|+.|++|+.||.+...++....+++.+.++..- ...++++ .+
T Consensus 99 wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~--~pm~vVata~ 175 (347)
T KOG0647|consen 99 WDLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVL--YPMAVVATAE 175 (347)
T ss_pred EEccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhcc--CceeEEEecC
Confidence 999998 5667778999999999988664 8999999999999999999999999999988877653 3455666 89
Q ss_pred CcEEEEEcccceeEE-Eec--CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCC--ceeEEeccccc---------ccE
Q 019326 192 EKVGIHQAEDAKLLC-ELD--GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSG--KVAYCIEDAHS---------ARV 256 (343)
Q Consensus 192 ~~i~~~d~~~~~~~~-~~~--~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~h~---------~~v 256 (343)
+.|.+|+++++.... ... ..-.+.|++.. +....+.|+-+|.+.+..+..+ +.-..++ .|. -.|
T Consensus 176 r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFk-CHR~~~~~~~~VYaV 254 (347)
T KOG0647|consen 176 RHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFK-CHRSTNSVNDDVYAV 254 (347)
T ss_pred CcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEE-EeccCCCCCCceEEe
Confidence 999999997764332 222 44567788766 5556699999999999988876 3344555 554 268
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccC
Q 019326 257 KGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIG 328 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~ 328 (343)
++|+|+|... .|+|++.||++.+||-+...+.+.. ..+..+|+|-+|+.+|.+.+-+.+
T Consensus 255 Nsi~FhP~hg---------tlvTaGsDGtf~FWDkdar~kLk~s----~~~~qpItcc~fn~~G~ifaYA~g 313 (347)
T KOG0647|consen 255 NSIAFHPVHG---------TLVTAGSDGTFSFWDKDARTKLKTS----ETHPQPITCCSFNRNGSIFAYALG 313 (347)
T ss_pred cceEeecccc---------eEEEecCCceEEEecchhhhhhhcc----CcCCCccceeEecCCCCEEEEEee
Confidence 8999999887 9999999999999998875433322 245567999999999998875544
No 69
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=100.00 E-value=3.4e-32 Score=234.54 Aligned_cols=270 Identities=20% Similarity=0.239 Sum_probs=231.2
Q ss_pred CCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeE-eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC
Q 019326 41 HLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGA-IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP 119 (343)
Q Consensus 41 h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 119 (343)
|...+++..|..+++++++.|++|++||..++..+.. +.+| .+.|.++++...+ .++++|+.|.++++||..+
T Consensus 207 ~~~~~~~~q~~~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH-~g~V~~l~~~~~~-----~~lvsgS~D~t~rvWd~~s 280 (537)
T KOG0274|consen 207 DDHVVLCLQLHDGFFKSGSDDSTLHLWDLNNGYLILTRLVGH-FGGVWGLAFPSGG-----DKLVSGSTDKTERVWDCST 280 (537)
T ss_pred CcchhhhheeecCeEEecCCCceeEEeecccceEEEeeccCC-CCCceeEEEecCC-----CEEEEEecCCcEEeEecCC
Confidence 6778899999999999999999999999999998888 9999 9999999999755 7999999999999999999
Q ss_pred cceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEE
Q 019326 120 FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIH 197 (343)
Q Consensus 120 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~ 197 (343)
+++...+.+|.+.|.++...+. .+++|+.|.+|++|++.++..+.... +..+|.++..+ +.+++++ .|+.|++|
T Consensus 281 g~C~~~l~gh~stv~~~~~~~~--~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW 356 (537)
T KOG0274|consen 281 GECTHSLQGHTSSVRCLTIDPF--LLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVW 356 (537)
T ss_pred CcEEEEecCCCceEEEEEccCc--eEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEE
Confidence 9999999999999999887654 78889999999999999999998888 88899999987 7788888 89999999
Q ss_pred EcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCC-ceeEEecccccccEEEEEEEecCCCCCCCCCCe
Q 019326 198 QAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSG-KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPY 275 (343)
Q Consensus 198 d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 275 (343)
|+.++++++.+. |...|.++.+...+.+++|+.|+.|++||+++. +++..+. +|...+..+.+...
T Consensus 357 ~~~~~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~-~h~~~v~~l~~~~~----------- 424 (537)
T KOG0274|consen 357 DPRTGKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQ-GHTSLVSSLLLRDN----------- 424 (537)
T ss_pred EhhhceeeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhc-CCcccccccccccc-----------
Confidence 999999999998 889999998854489999999999999999999 8999999 99999987766554
Q ss_pred EEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 276 LVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 276 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
+|++++.|++|++||..++......... +...|.+++.. ...++....++..+.++.
T Consensus 425 ~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~---~~~~v~~l~~~--~~~il~s~~~~~~~l~dl 481 (537)
T KOG0274|consen 425 FLVSSSADGTIKLWDAEEGECLRTLEGR---HVGGVSALALG--KEEILCSSDDGSVKLWDL 481 (537)
T ss_pred eeEeccccccEEEeecccCceeeeeccC---CcccEEEeecC--cceEEEEecCCeeEEEec
Confidence 8999999999999999988644433321 23456666665 344445555555554443
No 70
>PTZ00420 coronin; Provisional
Probab=100.00 E-value=6.2e-31 Score=227.55 Aligned_cols=249 Identities=14% Similarity=0.161 Sum_probs=192.7
Q ss_pred eeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc--------eeeeeeec
Q 019326 58 GGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV--------LLTSVKVH 129 (343)
Q Consensus 58 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~ 129 (343)
|+.++.|++|+..+...+..+.+| ...|.+++|+|.. +.+|++|+.|++|++||+.+.. ++..+.+|
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH-~~~V~~lafsP~~----~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH 124 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGH-TSSILDLQFNPCF----SEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGH 124 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCC-CCCEEEEEEcCCC----CCEEEEEeCCCeEEEEECCCCCccccccccceEEeecC
Confidence 667899999999888888889999 9999999999973 1799999999999999997532 34567889
Q ss_pred cccEEEEEEecCCCE-EEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEE
Q 019326 130 KKGVNDLAVHHSGKL-ALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCE 207 (343)
Q Consensus 130 ~~~v~~i~~~~~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~ 207 (343)
...|.+++|+|++.. |++++.|++|++||+++++......+...+.+++|+|+|.+++++ .|+.+++||+++++.+..
T Consensus 125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~t 204 (568)
T PTZ00420 125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASS 204 (568)
T ss_pred CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 999999999998865 578999999999999999877776677889999999999999988 799999999999998888
Q ss_pred ec-CCcceEEe-----eec-CCCeEEEEeCCC----cEEEEECCC-CceeEEecccccccEEEEEEEecCCCCCCCCCCe
Q 019326 208 LD-GKKRILCA-----APG-ENGVLFTGGEDR----SITAWDTNS-GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPY 275 (343)
Q Consensus 208 ~~-~~~~i~~~-----~~~-~~~~l~~~~~dg----~i~i~d~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 275 (343)
+. |.+.+.+. .++ +++++++++.|+ .|+|||+++ .+++..+. +......+....+. +++.
T Consensus 205 l~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~--ld~~~~~L~p~~D~------~tg~ 276 (568)
T PTZ00420 205 FHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMS--IDNASAPLIPHYDE------STGL 276 (568)
T ss_pred EecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEE--ecCCccceEEeeeC------CCCC
Confidence 77 55443322 233 557888877664 799999995 55665554 33233333222211 1233
Q ss_pred EEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCce
Q 019326 276 LVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSF 322 (343)
Q Consensus 276 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 322 (343)
++++|+.|++|++|++..+. ...+..+....++.++++.|...+
T Consensus 277 l~lsGkGD~tIr~~e~~~~~---~~~l~~~~s~~p~~g~~f~Pkr~~ 320 (568)
T PTZ00420 277 IYLIGKGDGNCRYYQHSLGS---IRKVNEYKSCSPFRSFGFLPKQIC 320 (568)
T ss_pred EEEEEECCCeEEEEEccCCc---EEeecccccCCCccceEEcccccc
Confidence 89999999999999998652 233445566677888888886553
No 71
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=4e-33 Score=216.41 Aligned_cols=263 Identities=13% Similarity=0.167 Sum_probs=224.4
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCC
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHE 82 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 82 (343)
+++|+.||.|++||+.. ..+..+++.|.+.|..|+++.+.+++++.|.+|+.|.++. .++.++.+.
T Consensus 82 ~aSGs~DG~VkiWnlsq------------R~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~-~p~~tilg~- 147 (433)
T KOG0268|consen 82 VASGSCDGEVKIWNLSQ------------RECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDG-PPLHTILGK- 147 (433)
T ss_pred hhccccCceEEEEehhh------------hhhhheeecccCceeeEEecccceEEecCCcceeeeeccC-Ccceeeecc-
Confidence 68999999999999987 5677888999999999999988899999999999999874 577777765
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccC
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVR 161 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~ 161 (343)
..+..+.-+..+ ..+++++. .|.|||.....++..+..-...|.++.|+|.. ..|++++.|+.|.+||+++
T Consensus 148 -s~~~gIdh~~~~-----~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~ 219 (433)
T KOG0268|consen 148 -SVYLGIDHHRKN-----SVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQ 219 (433)
T ss_pred -cccccccccccc-----ccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEeccc
Confidence 778888777666 68888887 49999998888999999888899999999975 6778888999999999999
Q ss_pred CceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccce-eEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEE
Q 019326 162 GRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAK-LLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAW 237 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~-~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~ 237 (343)
+.++......-..+.++|+|.+-.|+++ .|..++.||++.-. ++..+. |.+.|.++.|++ |.-+++|+.|.+|+||
T Consensus 220 ~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf 299 (433)
T KOG0268|consen 220 ASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIF 299 (433)
T ss_pred CCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEe
Confidence 9999988888889999999988788888 99999999998754 444444 788999999995 7899999999999999
Q ss_pred ECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc
Q 019326 238 DTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK 296 (343)
Q Consensus 238 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 296 (343)
..+.+..--.+..---..|.++.|+.+.+ ++++||.|+.|++|..+...+
T Consensus 300 ~~~~~~SRdiYhtkRMq~V~~Vk~S~Dsk---------yi~SGSdd~nvRlWka~Asek 349 (433)
T KOG0268|consen 300 PVNHGHSRDIYHTKRMQHVFCVKYSMDSK---------YIISGSDDGNVRLWKAKASEK 349 (433)
T ss_pred ecCCCcchhhhhHhhhheeeEEEEecccc---------EEEecCCCcceeeeecchhhh
Confidence 99877643333212345789999999988 999999999999999887643
No 72
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=5e-32 Score=237.28 Aligned_cols=284 Identities=17% Similarity=0.183 Sum_probs=232.5
Q ss_pred eeEEec--cCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCC------
Q 019326 2 SLIAGS--YEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLST------ 71 (343)
Q Consensus 2 ~l~~g~--~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~------ 71 (343)
++++|+ .|+.++||+.........+....-.+.+.+...|.+.|+|+.|+ |.+||+|+.|+.|.||....
T Consensus 27 ~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~ 106 (942)
T KOG0973|consen 27 KFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTV 106 (942)
T ss_pred eEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCccc
Confidence 678999 89999999987643221111111234556667899999999999 99999999999999999872
Q ss_pred ------------CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEe
Q 019326 72 ------------SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVH 139 (343)
Q Consensus 72 ------------~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~ 139 (343)
.+....+.+| ...|..++|+|++ .+|++++.|++|.+||..+++.+..+++|.+.|..+.|.
T Consensus 107 fgs~g~~~~vE~wk~~~~l~~H-~~DV~Dv~Wsp~~-----~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~D 180 (942)
T KOG0973|consen 107 FGSTGGAKNVESWKVVSILRGH-DSDVLDVNWSPDD-----SLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWD 180 (942)
T ss_pred ccccccccccceeeEEEEEecC-CCccceeccCCCc-----cEEEEecccceEEEEccccceeeeeeecccccccceEEC
Confidence 1466778899 9999999999998 899999999999999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCceeEEEEc-------CCcceEEEEeCCCCEEEEE--e---CCcEEEEEcccceeEEE
Q 019326 140 HSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-------GKEASLIKFDGSGEKFFMV--T---EEKVGIHQAEDAKLLCE 207 (343)
Q Consensus 140 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~--~---~~~i~~~d~~~~~~~~~ 207 (343)
|-|++|++-+.|++|++|++.+......... ......+.|+|+|.+|++. . ...+.|.+-.+.+.-..
T Consensus 181 P~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~ 260 (942)
T KOG0973|consen 181 PIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKD 260 (942)
T ss_pred CccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeee
Confidence 9999999999999999999776544333322 2345679999999999998 2 34577887777665555
Q ss_pred ec-CCcceEEeeec------CCC------------eEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCC
Q 019326 208 LD-GKKRILCAAPG------ENG------------VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGG 268 (343)
Q Consensus 208 ~~-~~~~i~~~~~~------~~~------------~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 268 (343)
+- |..++.++.|+ +.. .+++|+.|++|.||.....+++.....-....|.++.|+|++-
T Consensus 261 LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~-- 338 (942)
T KOG0973|consen 261 LVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGF-- 338 (942)
T ss_pred eecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCC--
Confidence 44 88999999997 122 6789999999999999888888877656678999999999987
Q ss_pred CCCCCCeEEEEEcCCCcEEEEeccCccccCCC
Q 019326 269 STAENPYLVASASSDGVICVWDVRMAIKEKPL 300 (343)
Q Consensus 269 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 300 (343)
.|+.+|.||+|.+..++........
T Consensus 339 -------~LfacS~DGtV~~i~Fee~ElG~~l 363 (942)
T KOG0973|consen 339 -------SLFACSLDGTVALIHFEEKELGVAL 363 (942)
T ss_pred -------eEEEEecCCeEEEEEcchHHhCccc
Confidence 8999999999999999886544433
No 73
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.5e-33 Score=218.73 Aligned_cols=282 Identities=15% Similarity=0.157 Sum_probs=237.9
Q ss_pred eEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCe
Q 019326 35 LFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF 111 (343)
Q Consensus 35 ~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 111 (343)
+..+.||.+.|.|++=+ -..+++|+.||.|++||+.+..+...++.| .+.|..|++... .+++++.|.+
T Consensus 59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH-~G~V~Gi~v~~~-------~~~tvgdDKt 130 (433)
T KOG0268|consen 59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAH-EGLVRGICVTQT-------SFFTVGDDKT 130 (433)
T ss_pred hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecc-cCceeeEEeccc-------ceEEecCCcc
Confidence 45678999999999998 356999999999999999999999999999 999999999873 5899999999
Q ss_pred EEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC-CcceEEEEeCCCCEEEE-E
Q 019326 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG-KEASLIKFDGSGEKFFM-V 189 (343)
Q Consensus 112 i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~ 189 (343)
|+.|-++. .++.++.+ ...+..|.-+..+..++++|. .|.|||.+...++.....+ ..+.++.|+|....++. +
T Consensus 131 vK~wk~~~-~p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~ 206 (433)
T KOG0268|consen 131 VKQWKIDG-PPLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASC 206 (433)
T ss_pred eeeeeccC-Ccceeeec-cccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeee
Confidence 99999876 46666653 456777777777788999886 5999999888888777776 66899999997765544 4
Q ss_pred -eCCcEEEEEcccceeEEEecCCcceEEeeecCC-CeEEEEeCCCcEEEEECCCCc-eeEEecccccccEEEEEEEecCC
Q 019326 190 -TEEKVGIHQAEDAKLLCELDGKKRILCAAPGEN-GVLFTGGEDRSITAWDTNSGK-VAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 190 -~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
+|+.|.+||++.+.+++.+.....-+.++|+|+ -.+++|++|..++.||++..+ ++.... +|...|.++.|+|.|+
T Consensus 207 ~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~-dhvsAV~dVdfsptG~ 285 (433)
T KOG0268|consen 207 ASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHK-DHVSAVMDVDFSPTGQ 285 (433)
T ss_pred ccCCceEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhc-ccceeEEEeccCCCcc
Confidence 899999999999999999988888899999974 377889999999999998765 555555 9999999999999998
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccccCcc
Q 019326 267 GGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKASME 341 (343)
Q Consensus 267 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 341 (343)
-+++||.|.+|+||.++.+. ...+.....-..|.|+.||-|.+|+++|+.++.++.+.....|
T Consensus 286 ---------EfvsgsyDksIRIf~~~~~~---SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Ase 348 (433)
T KOG0268|consen 286 ---------EFVSGSYDKSIRIFPVNHGH---SRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASE 348 (433)
T ss_pred ---------hhccccccceEEEeecCCCc---chhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhh
Confidence 89999999999999999773 2222223334579999999999999999999999887765443
No 74
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-31 Score=223.31 Aligned_cols=263 Identities=17% Similarity=0.226 Sum_probs=225.8
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
+++.+....|++|+... +. ...+..+ +...|+++.|+ |.+|++|..+|.|.|||..+.+.+..+..
T Consensus 190 ~laValg~~vylW~~~s-------~~---v~~l~~~--~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~ 257 (484)
T KOG0305|consen 190 VLAVALGQSVYLWSASS-------GS---VTELCSF--GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRG 257 (484)
T ss_pred eEEEEecceEEEEecCC-------Cc---eEEeEec--CCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccC
Confidence 44555557899999877 22 3444443 38899999999 99999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeee-eeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTS-VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
+|...|.+++|.. ..+.+|+.|+.|..+|++..+.... +.+|...|..+.|++++.++++|+.|+.+.|||.
T Consensus 258 ~h~~rvg~laW~~-------~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~ 330 (484)
T KOG0305|consen 258 SHASRVGSLAWNS-------SVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDG 330 (484)
T ss_pred CcCceeEEEeccC-------ceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccC
Confidence 3399999999993 4799999999999999987765554 8899999999999999999999999999999999
Q ss_pred cCCce-eEEEEcCCcceEEEEeCC-CCEEEEE---eCCcEEEEEcccceeEEEecCCcceEEeeecCC-C-eEEE-EeCC
Q 019326 160 VRGRR-SFYHKIGKEASLIKFDGS-GEKFFMV---TEEKVGIHQAEDAKLLCELDGKKRILCAAPGEN-G-VLFT-GGED 231 (343)
Q Consensus 160 ~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~-~~~d 231 (343)
....+ .....+...|..++|+|- ...||++ .|+.|++||..+++.+..+.....|.++.|++. + ++.+ |..+
T Consensus 331 ~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~ 410 (484)
T KOG0305|consen 331 LSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSE 410 (484)
T ss_pred CCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCC
Confidence 65554 445667789999999995 4566666 689999999999999999999999999999943 3 3333 4567
Q ss_pred CcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 232 RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 232 g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
+.|.||+..+.+.+..+. +|...|..++++|++. .+++|+.|.++++|++-..
T Consensus 411 n~i~lw~~ps~~~~~~l~-gH~~RVl~la~SPdg~---------~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 411 NQITLWKYPSMKLVAELL-GHTSRVLYLALSPDGE---------TIVTGAADETLRFWNLFDE 463 (484)
T ss_pred CcEEEEeccccceeeeec-CCcceeEEEEECCCCC---------EEEEecccCcEEeccccCC
Confidence 899999999999999999 9999999999999988 9999999999999999864
No 75
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=100.00 E-value=4.2e-30 Score=219.15 Aligned_cols=297 Identities=19% Similarity=0.231 Sum_probs=245.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
+++.|+.+|.+.+|++++ .+.+++++++...|+++.-+ =+.+|.|..+|+|.+++++.++.+.+|+
T Consensus 174 KIvvGs~~G~lql~Nvrt------------~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk 241 (910)
T KOG1539|consen 174 KIVVGSSQGRLQLWNVRT------------GKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFK 241 (910)
T ss_pred eEEEeecCCcEEEEEecc------------CcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEE
Confidence 588999999999999998 57789999999999999988 5789999999999999999999999998
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeee-eccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK-VHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
.. .+.|++++|..+|+ ..+++|+..|.+.+||++..+.+..++ .|.+.|....|.|....+++++.|+.+++|-
T Consensus 242 ~d-~g~VtslSFrtDG~----p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~v 316 (910)
T KOG1539|consen 242 QD-WGRVTSLSFRTDGN----PLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWV 316 (910)
T ss_pred cc-ccceeEEEeccCCC----eeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEE
Confidence 76 79999999999994 688899999999999998877766665 6777777777777777777777777776663
Q ss_pred ccCCce-----------------eEEE-----------------------------------------------------
Q 019326 159 LVRGRR-----------------SFYH----------------------------------------------------- 168 (343)
Q Consensus 159 ~~~~~~-----------------~~~~----------------------------------------------------- 168 (343)
..++.- +...
T Consensus 317 fD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p 396 (910)
T KOG1539|consen 317 FDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLP 396 (910)
T ss_pred eeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCC
Confidence 321100 0000
Q ss_pred -------------------------------------------E------cCCcceEEEEeCCCCEEEEE-eCCcEEEEE
Q 019326 169 -------------------------------------------K------IGKEASLIKFDGSGEKFFMV-TEEKVGIHQ 198 (343)
Q Consensus 169 -------------------------------------------~------~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d 198 (343)
. ....+.+++.++.|++.+.+ +.|.|.+|+
T Consensus 397 ~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fN 476 (910)
T KOG1539|consen 397 PIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFN 476 (910)
T ss_pred cceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEE
Confidence 0 00123567888899999999 999999999
Q ss_pred cccceeEEEe----cCCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeE---------------------------
Q 019326 199 AEDAKLLCEL----DGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAY--------------------------- 246 (343)
Q Consensus 199 ~~~~~~~~~~----~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~--------------------------- 246 (343)
+++|-....+ .|..+|+.++... ++.+++++.+|.+.+||..+...+.
T Consensus 477 mQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf 556 (910)
T KOG1539|consen 477 MQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDF 556 (910)
T ss_pred cccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCce
Confidence 9999988888 4899999999973 5689999999999999998654322
Q ss_pred --------------EecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccccccccccee
Q 019326 247 --------------CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLT 312 (343)
Q Consensus 247 --------------~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~ 312 (343)
.+. +|+..|++++|+|++. +|++++.|++|++||+.++. .+-.+....+..
T Consensus 557 ~I~vvD~~t~kvvR~f~-gh~nritd~~FS~Dgr---------WlisasmD~tIr~wDlpt~~-----lID~~~vd~~~~ 621 (910)
T KOG1539|consen 557 SIRVVDVVTRKVVREFW-GHGNRITDMTFSPDGR---------WLISASMDSTIRTWDLPTGT-----LIDGLLVDSPCT 621 (910)
T ss_pred eEEEEEchhhhhhHHhh-ccccceeeeEeCCCCc---------EEEEeecCCcEEEEeccCcc-----eeeeEecCCcce
Confidence 233 8999999999999988 99999999999999999885 445667778899
Q ss_pred EEEcCCCCceeccccCCC
Q 019326 313 CLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 313 ~~~~s~~~~~~~~~~~~~ 330 (343)
++.+||++.|++..-.++
T Consensus 622 sls~SPngD~LAT~Hvd~ 639 (910)
T KOG1539|consen 622 SLSFSPNGDFLATVHVDQ 639 (910)
T ss_pred eeEECCCCCEEEEEEecC
Confidence 999999999998776664
No 76
>PTZ00421 coronin; Provisional
Probab=100.00 E-value=3.4e-30 Score=221.89 Aligned_cols=224 Identities=15% Similarity=0.241 Sum_probs=182.8
Q ss_pred EecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCC-------eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEe
Q 019326 37 SYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTS-------SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFST 106 (343)
Q Consensus 37 ~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~ 106 (343)
.+.+|.++|++++|+ +++|++|+.|++|++||+.++ +.+..+.+| ...|.+++|+|.+ .++|++|
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH-~~~V~~l~f~P~~----~~iLaSg 144 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGH-TKKVGIVSFHPSA----MNVLASA 144 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCC-CCcEEEEEeCcCC----CCEEEEE
Confidence 367999999999998 578999999999999999765 346678888 8999999999986 2589999
Q ss_pred eCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCC--cceEEEEeCCCC
Q 019326 107 SADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGK--EASLIKFDGSGE 184 (343)
Q Consensus 107 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~--~~~~~~~~~~~~ 184 (343)
+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.|++||+++++.+....... ....+.|.+++.
T Consensus 145 s~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~ 224 (493)
T PTZ00421 145 GADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKD 224 (493)
T ss_pred eCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCC
Confidence 999999999999999999999999999999999999999999999999999999998766554332 345678888888
Q ss_pred EEEEE-----eCCcEEEEEcccce-eEEEec--CCcceEEeeec-CCCeEEEEe-CCCcEEEEECCCCceeEEecccccc
Q 019326 185 KFFMV-----TEEKVGIHQAEDAK-LLCELD--GKKRILCAAPG-ENGVLFTGG-EDRSITAWDTNSGKVAYCIEDAHSA 254 (343)
Q Consensus 185 ~~~~~-----~~~~i~~~d~~~~~-~~~~~~--~~~~i~~~~~~-~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~h~~ 254 (343)
.++++ .++.|++||+++.. ...... ....+....++ +++++++++ .|+.|++||+.+++.+......+..
T Consensus 225 ~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~ 304 (493)
T PTZ00421 225 LIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVE 304 (493)
T ss_pred eEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCC
Confidence 77765 26899999998754 333333 23344455565 456777776 5999999999999988777645667
Q ss_pred cEEEEEEEecC
Q 019326 255 RVKGIVVLTKN 265 (343)
Q Consensus 255 ~v~~~~~~~~~ 265 (343)
++.++++.|..
T Consensus 305 ~~~g~~~~pk~ 315 (493)
T PTZ00421 305 PHKGLCMMPKW 315 (493)
T ss_pred CCcceEecccc
Confidence 88899998864
No 77
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-31 Score=198.14 Aligned_cols=259 Identities=17% Similarity=0.209 Sum_probs=213.2
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCC-CeeeeEeccCCCC
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLST-SSSLGAIHHHESS 84 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~ 84 (343)
.|.+.|.++.. .+ .......+. -.+.+..++|+ .+.+++++.||++++||+.. ..++..++.| ..
T Consensus 37 ~G~L~ile~~~-------~~--gi~e~~s~d-~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH-~~ 105 (311)
T KOG0277|consen 37 NGRLFILEVTD-------PK--GIQECQSYD-TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEH-KR 105 (311)
T ss_pred CceEEEEecCC-------CC--CeEEEEeee-cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhh-hh
Confidence 67888888863 11 133444443 46789999999 78899999999999999653 3678889999 99
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecC-CCEEEEEeCCCeEEEEEccCCc
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHS-GKLALTVGRDDCLAMVNLVRGR 163 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~~~d~~i~~wd~~~~~ 163 (343)
+|.++.|++... ..+++++.|++|++|+....+.+.++.+|...|....|+|. .+.+++++.|+++++||++...
T Consensus 106 EV~Svdwn~~~r----~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~g 181 (311)
T KOG0277|consen 106 EVYSVDWNTVRR----RIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPG 181 (311)
T ss_pred heEEeccccccc----eeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCC
Confidence 999999998873 67888899999999999999999999999999999999995 5899999999999999998654
Q ss_pred -eeEEEEcCCcceEEEEeCCCC-EEEEE-eCCcEEEEEcccce-eEEEec-CCcceEEeeecC--CCeEEEEeCCCcEEE
Q 019326 164 -RSFYHKIGKEASLIKFDGSGE-KFFMV-TEEKVGIHQAEDAK-LLCELD-GKKRILCAAPGE--NGVLFTGGEDRSITA 236 (343)
Q Consensus 164 -~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~i~~~d~~~~~-~~~~~~-~~~~i~~~~~~~--~~~l~~~~~dg~i~i 236 (343)
......+..++.++.|+.... .++++ .|+.|+.||+++-+ ++..+. |.-.|..+.+++ ..+|++++.|-+++|
T Consensus 182 k~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~ri 261 (311)
T KOG0277|consen 182 KFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRI 261 (311)
T ss_pred ceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEe
Confidence 444444556899999988655 55566 89999999999855 445554 888999999996 469999999999999
Q ss_pred EECCCCce-eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 237 WDTNSGKV-AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 237 ~d~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
||...+.. +.+.. .|+.-+.++.|+..... ++|+.+.|+.++||+.
T Consensus 262 w~~~~~ds~~e~~~-~HtEFv~g~Dws~~~~~--------~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 262 WDPERQDSAIETVD-HHTEFVCGLDWSLFDPG--------QVASTGWDELLYVWNP 308 (311)
T ss_pred cccccchhhhhhhh-ccceEEeccccccccCc--------eeeecccccceeeecc
Confidence 99986554 44455 89999999999987442 8999999999999985
No 78
>PTZ00420 coronin; Provisional
Probab=100.00 E-value=1.9e-30 Score=224.60 Aligned_cols=243 Identities=12% Similarity=0.133 Sum_probs=186.1
Q ss_pred EeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCe--------
Q 019326 5 AGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSS-------- 73 (343)
Q Consensus 5 ~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~-------- 73 (343)
.|+.++.|++|+... ..++..+.+|.++|.+++|+ +++|++|+.||.|++||+.++.
T Consensus 49 gGG~~gvI~L~~~~r------------~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~ 116 (568)
T PTZ00420 49 GGGLIGAIRLENQMR------------KPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKD 116 (568)
T ss_pred CCCceeEEEeeecCC------------CceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcccccccc
Confidence 356677788887654 24567788999999999998 5799999999999999997642
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCe
Q 019326 74 SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDC 153 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~ 153 (343)
.+..+.+| ...|.+++|+|++. ..|++++.|++|++||+++++.+..+. |...|.+++|+|+|.+|++++.|+.
T Consensus 117 p~~~L~gH-~~~V~sVaf~P~g~----~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~ 190 (568)
T PTZ00420 117 PQCILKGH-KKKISIIDWNPMNY----YIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKH 190 (568)
T ss_pred ceEEeecC-CCcEEEEEECCCCC----eEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCE
Confidence 33467788 89999999999872 356799999999999999988777776 6678999999999999999999999
Q ss_pred EEEEEccCCceeEEEEcC-CcceE-----EEEeCCCCEEEEE-eC----CcEEEEEccc-ceeEEEecCCcceEE---ee
Q 019326 154 LAMVNLVRGRRSFYHKIG-KEASL-----IKFDGSGEKFFMV-TE----EKVGIHQAED-AKLLCELDGKKRILC---AA 218 (343)
Q Consensus 154 i~~wd~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~-~~----~~i~~~d~~~-~~~~~~~~~~~~i~~---~~ 218 (343)
|++||+++++.+...... ..+.. ..|++++.+++++ .+ +.|++||+++ .+++..+.+...... ..
T Consensus 191 IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~ 270 (568)
T PTZ00420 191 MHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHY 270 (568)
T ss_pred EEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEee
Confidence 999999999877655433 32222 3345888888886 44 3799999995 566666554333222 22
Q ss_pred ec-CCCeEEEEeCCCcEEEEECCCCceeEEec-ccccccEEEEEEEecCC
Q 019326 219 PG-ENGVLFTGGEDRSITAWDTNSGKVAYCIE-DAHSARVKGIVVLTKND 266 (343)
Q Consensus 219 ~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~h~~~v~~~~~~~~~~ 266 (343)
.. .+.++++|+.|+.|++|++..+. +..+. ..+..++.+++|.|...
T Consensus 271 D~~tg~l~lsGkGD~tIr~~e~~~~~-~~~l~~~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 271 DESTGLIYLIGKGDGNCRYYQHSLGS-IRKVNEYKSCSPFRSFGFLPKQI 319 (568)
T ss_pred eCCCCCEEEEEECCCeEEEEEccCCc-EEeecccccCCCccceEEccccc
Confidence 22 35688899999999999998764 33332 13667889999999753
No 79
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=100.00 E-value=1.6e-30 Score=193.60 Aligned_cols=253 Identities=15% Similarity=0.221 Sum_probs=221.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
+|++|+.|+.+++|+++. . .+......++|.+.|-.++|+ ++.|++++.|.+|++||..++++...+
T Consensus 34 ~lasgs~dktv~v~n~e~-------~---r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i 103 (313)
T KOG1407|consen 34 KLASGSFDKTVSVWNLER-------D---RFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARI 103 (313)
T ss_pred eeeecccCCceEEEEecc-------h---hhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEe
Confidence 689999999999999986 2 244445667999999999998 789999999999999999999999988
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
... ..=.-+.|+|++ +++++++.|..|...|.++.+.+...+ ....+.-++|+.++.+++.....|.|.|..
T Consensus 104 ~~~--~eni~i~wsp~g-----~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~v~ILs 175 (313)
T KOG1407|consen 104 ETK--GENINITWSPDG-----EYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGCVEILS 175 (313)
T ss_pred ecc--CcceEEEEcCCC-----CEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEecCCceEEEEe
Confidence 766 444458899999 899999999999999999887776665 455778899998888888888889999999
Q ss_pred ccCCceeEEE-EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcE
Q 019326 159 LVRGRRSFYH-KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSI 234 (343)
Q Consensus 159 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i 234 (343)
....+++..+ .++....|+.|+|+|++|+++ .|..+.+||+...-+.+.+. +.-+|..+.|+ ++++|++|++|..|
T Consensus 176 ypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~I 255 (313)
T KOG1407|consen 176 YPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFI 255 (313)
T ss_pred ccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceE
Confidence 8877766544 455777889999999999999 99999999999998888887 88999999999 78999999999999
Q ss_pred EEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC
Q 019326 235 TAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD 283 (343)
Q Consensus 235 ~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d 283 (343)
-|=++++|..+.+++ +.++...++|+|... +||-++.|
T Consensus 256 DIA~vetGd~~~eI~--~~~~t~tVAWHPk~~---------LLAyA~dd 293 (313)
T KOG1407|consen 256 DIAEVETGDRVWEIP--CEGPTFTVAWHPKRP---------LLAYACDD 293 (313)
T ss_pred EeEecccCCeEEEee--ccCCceeEEecCCCc---------eeeEEecC
Confidence 999999999999998 999999999999987 88887765
No 80
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-31 Score=195.75 Aligned_cols=236 Identities=18% Similarity=0.187 Sum_probs=210.9
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEE
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAM 156 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~ 156 (343)
.+++| ..+++.+.++.++ .+|++++.|.+..+|-..+++.+.++.+|.+.|++++.+.+.+++++|+.|.++++
T Consensus 5 ~l~GH-ERplTqiKyN~eG-----DLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kL 78 (327)
T KOG0643|consen 5 LLQGH-ERPLTQIKYNREG-----DLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKL 78 (327)
T ss_pred ccccC-ccccceEEecCCC-----cEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEE
Confidence 45778 9999999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeC------CcEEEEEccc-------ceeEEEec-CCcceEEeeecC-
Q 019326 157 VNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTE------EKVGIHQAED-------AKLLCELD-GKKRILCAAPGE- 221 (343)
Q Consensus 157 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~d~~~-------~~~~~~~~-~~~~i~~~~~~~- 221 (343)
||+++|+++...+.+.++..+.|++++++++.+.| +.|.++|++. .++...+. +...++.+.|.+
T Consensus 79 WDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l 158 (327)
T KOG0643|consen 79 WDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPL 158 (327)
T ss_pred EEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeeccc
Confidence 99999999999999999999999999999988843 4588999883 44455555 678899999984
Q ss_pred CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCc
Q 019326 222 NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLP 301 (343)
Q Consensus 222 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 301 (343)
+..+++|..||.|.+||.++++.+..-...|...|+.|.++++.. +++++|.|.+-++||+.+.. .
T Consensus 159 ~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T---------~FiT~s~Dttakl~D~~tl~-----v 224 (327)
T KOG0643|consen 159 GETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRT---------YFITGSKDTTAKLVDVRTLE-----V 224 (327)
T ss_pred CCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcc---------eEEecccCccceeeecccee-----e
Confidence 789999999999999999998766555448999999999999998 99999999999999999864 4
Q ss_pred ccccccccceeEEEcCCCCceeccccCCCCC
Q 019326 302 LAEAKTNSRLTCLAGSSTKSFKRPQIGDSAP 332 (343)
Q Consensus 302 ~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~ 332 (343)
+..+....+|++.+++|...+++.+.+++.-
T Consensus 225 ~Kty~te~PvN~aaisP~~d~VilgGGqeA~ 255 (327)
T KOG0643|consen 225 LKTYTTERPVNTAAISPLLDHVILGGGQEAM 255 (327)
T ss_pred EEEeeecccccceecccccceEEecCCceee
Confidence 4567778899999999999999999888743
No 81
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5e-31 Score=212.13 Aligned_cols=270 Identities=15% Similarity=0.141 Sum_probs=225.5
Q ss_pred CCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC
Q 019326 41 HLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA 117 (343)
Q Consensus 41 h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 117 (343)
..++|++++|+ +.-+|+.+. -.+.+|+..+......+... ...+.++.|..+| ++|++|+..|.|++||.
T Consensus 25 e~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~~~k~~srF-k~~v~s~~fR~DG-----~LlaaGD~sG~V~vfD~ 97 (487)
T KOG0310|consen 25 EHNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRSVRKTFSRF-KDVVYSVDFRSDG-----RLLAAGDESGHVKVFDM 97 (487)
T ss_pred ccCcceeEecCCCCCCceEEecc-cEEEEEecchhhhhhhHHhh-ccceeEEEeecCC-----eEEEccCCcCcEEEecc
Confidence 35789999999 344555443 46999999988877777777 7899999999999 89999999999999998
Q ss_pred CCcceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCcee-EEEEcCCcceEEEEeCCCC-EEEEE-eCCc
Q 019326 118 DPFVLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRS-FYHKIGKEASLIKFDGSGE-KFFMV-TEEK 193 (343)
Q Consensus 118 ~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~ 193 (343)
.+...++.+.+|+.+|..+.|+|++ ..+++|+.|+.+++||+.+.... ....+..-|.+.+++|... .++++ .||.
T Consensus 98 k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~ 177 (487)
T KOG0310|consen 98 KSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGK 177 (487)
T ss_pred ccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCce
Confidence 8877889999999999999999965 67888888999999999988753 2334567899999999776 55566 8999
Q ss_pred EEEEEcccc-eeEEEecCCcceEEeeecCC-CeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCC
Q 019326 194 VGIHQAEDA-KLLCELDGKKRILCAAPGEN-GVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTA 271 (343)
Q Consensus 194 i~~~d~~~~-~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 271 (343)
|++||++.. ..+.++.|..+|..+.+-++ ..+++++ ...|++||+.+|..+......|...|+|+.+..++.
T Consensus 178 vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~----- 251 (487)
T KOG0310|consen 178 VRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDST----- 251 (487)
T ss_pred EEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCc-----
Confidence 999999987 78889999999999999865 6666665 567999999977655444425999999999999876
Q ss_pred CCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCC
Q 019326 272 ENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAP 332 (343)
Q Consensus 272 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~ 332 (343)
.|+|++-|+.+++||+.+-+ .+....-.++|.+++.+|++..++.|++++.+
T Consensus 252 ----rLlS~sLD~~VKVfd~t~~K-----vv~s~~~~~pvLsiavs~dd~t~viGmsnGlv 303 (487)
T KOG0310|consen 252 ----RLLSGSLDRHVKVFDTTNYK-----VVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLV 303 (487)
T ss_pred ----eEeecccccceEEEEccceE-----EEEeeecccceeeEEecCCCceEEEeccccee
Confidence 99999999999999987654 44556667889999999999999999999844
No 82
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=1.5e-31 Score=205.22 Aligned_cols=277 Identities=16% Similarity=0.206 Sum_probs=236.2
Q ss_pred CCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec--------cCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 40 AHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH--------HHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
+....+.|..|+ |++|++|+.||.|.+||..+|+....++ -+ ..+|.|+.|+.+. ..+++|+.|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMm-d~aVlci~FSRDs-----EMlAsGsqD 284 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMM-DDAVLCISFSRDS-----EMLASGSQD 284 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeec-ccceEEEeecccH-----HHhhccCcC
Confidence 456678899999 9999999999999999999997655443 34 6899999999998 899999999
Q ss_pred CeEEEEECCCcceeeeee-eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-CCcceEEEEeCCCCEEE
Q 019326 110 GFVSIFDADPFVLLTSVK-VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-GKEASLIKFDGSGEKFF 187 (343)
Q Consensus 110 g~i~iwd~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 187 (343)
|.|++|.+.++.+++.|. .|...|+++.|+.|+..+++++.|.++++.-+.+|+++..+.. ...++...|.++|.+++
T Consensus 285 GkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~ii 364 (508)
T KOG0275|consen 285 GKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHII 364 (508)
T ss_pred CcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEE
Confidence 999999999999999997 8999999999999999999999999999999999998876654 46788999999999999
Q ss_pred EE-eCCcEEEEEcccceeEEEec---CCcceEEeeecC--CCeEEEEeCCCcEEEEECCCCceeEEecccc--cccEEEE
Q 019326 188 MV-TEEKVGIHQAEDAKLLCELD---GKKRILCAAPGE--NGVLFTGGEDRSITAWDTNSGKVAYCIEDAH--SARVKGI 259 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h--~~~v~~~ 259 (343)
++ .|+++++|+..+.+++.+++ ...+|+++..-+ ...++++...++|++.++. |+.++.+..+. .+..-+.
T Consensus 365 saSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~ 443 (508)
T KOG0275|consen 365 SASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINA 443 (508)
T ss_pred EecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEE
Confidence 99 99999999999999998887 456677777654 4588899999999999987 88888887443 2344455
Q ss_pred EEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCcc
Q 019326 260 VVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEE 336 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~ 336 (343)
..+|.+. ++++.++|+.++-|.+.+++.+...++.+. .+..++-+|...+++.=++|+..+.+.
T Consensus 444 ~lSpkGe---------wiYcigED~vlYCF~~~sG~LE~tl~VhEk----dvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 444 ILSPKGE---------WIYCIGEDGVLYCFSVLSGKLERTLPVHEK----DVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred EecCCCc---------EEEEEccCcEEEEEEeecCceeeeeecccc----cccccccCcccchhhhhcccchhhhcC
Confidence 6788887 999999999999999999976666655433 366788889888998888888877654
No 83
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-29 Score=191.10 Aligned_cols=261 Identities=16% Similarity=0.205 Sum_probs=214.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeC--CCeEEEEEcCCCeeeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGT--DDTIHLYDLSTSSSLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~--dg~i~iwd~~~~~~~~~ 77 (343)
.|++.+.|..|++||... .+++.++..++-.|..++|. .+.++.++. |.+||..++.+.+.++.
T Consensus 28 ~litss~dDsl~LYd~~~------------g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRY 95 (311)
T KOG1446|consen 28 LLITSSEDDSLRLYDSLS------------GKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRY 95 (311)
T ss_pred EEEEecCCCeEEEEEcCC------------CceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEE
Confidence 477888999999999987 45666666777788888887 667776666 88999999999999999
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEE
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMV 157 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~w 157 (343)
|.+| ...|.+|+.+|-+ ..+++++.|++|++||++..++...+.....+ .++|.|+|-++|++...+.|++|
T Consensus 96 F~GH-~~~V~sL~~sP~~-----d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p--i~AfDp~GLifA~~~~~~~IkLy 167 (311)
T KOG1446|consen 96 FPGH-KKRVNSLSVSPKD-----DTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP--IAAFDPEGLIFALANGSELIKLY 167 (311)
T ss_pred cCCC-CceEEEEEecCCC-----CeEEecccCCeEEeeEecCCCCceEEecCCCc--ceeECCCCcEEEEecCCCeEEEE
Confidence 9999 9999999999999 89999999999999999987877777644444 47899999999999888899999
Q ss_pred EccCCce--eEEEEc----CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCC---cc-eEEeeec-CCCeE
Q 019326 158 NLVRGRR--SFYHKI----GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGK---KR-ILCAAPG-ENGVL 225 (343)
Q Consensus 158 d~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~---~~-i~~~~~~-~~~~l 225 (343)
|++.-.. ...+.. ..+...+.|+|+|++++.+ ..+.+.+.|.-+|..+..+... .. ....+|. +++++
T Consensus 168 D~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fv 247 (311)
T KOG1446|consen 168 DLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFV 247 (311)
T ss_pred EecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEE
Confidence 9987532 222222 3567789999999999999 8899999999999988888721 11 2355565 56899
Q ss_pred EEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 226 FTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 226 ~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
++|+.||+|.+|+++++..+..+...+..++.++.|+|... +++|+ +..+.+|=...
T Consensus 248 l~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~---------mf~sa--~s~l~fw~p~~ 304 (311)
T KOG1446|consen 248 LSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYA---------MFVSA--SSNLVFWLPDE 304 (311)
T ss_pred EEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCcee---------eeeec--CceEEEEeccc
Confidence 99999999999999999999999944899999999999854 55555 56789997664
No 84
>PTZ00421 coronin; Provisional
Probab=99.98 E-value=2.7e-29 Score=216.39 Aligned_cols=252 Identities=14% Similarity=0.155 Sum_probs=184.3
Q ss_pred EecCceEEEeeCCCeEEEEEcCCCeee-------------eEeccCCCCCeEEEEEeC-CCCCCCCceEEEeeCCCeEEE
Q 019326 49 AVSGTAAASGGTDDTIHLYDLSTSSSL-------------GAIHHHESSSVTSLAFYT-PQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 49 ~~~~~~l~s~~~dg~i~iwd~~~~~~~-------------~~~~~~~~~~v~~l~~~~-~~~~~~~~~l~s~~~dg~i~i 114 (343)
+|++..+++++.+.....|+...+..+ ..+.+| .+.|.+++|+| ++ ++|++|+.|++|++
T Consensus 29 ~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH-~~~V~~v~fsP~d~-----~~LaSgS~DgtIkI 102 (493)
T PTZ00421 29 LWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQ-EGPIIDVAFNPFDP-----QKLFTASEDGTIMG 102 (493)
T ss_pred cCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCC-CCCEEEEEEcCCCC-----CEEEEEeCCCEEEE
Confidence 344455666666666666665433221 246678 89999999999 55 79999999999999
Q ss_pred EECCCc-------ceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCE
Q 019326 115 FDADPF-------VLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEK 185 (343)
Q Consensus 115 wd~~~~-------~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 185 (343)
||+.+. +++..+.+|...|.+++|+|++ ++|++++.|++|++||+++++...... +...+.+++|+|++..
T Consensus 103 Wdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~l 182 (493)
T PTZ00421 103 WGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSL 182 (493)
T ss_pred EecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCE
Confidence 999654 3567788999999999999985 799999999999999999988766554 4577999999999999
Q ss_pred EEEE-eCCcEEEEEcccceeEEEec-CCcc-eEEeeec-CCCeEEEEe----CCCcEEEEECCCCc-eeEEecccccccE
Q 019326 186 FFMV-TEEKVGIHQAEDAKLLCELD-GKKR-ILCAAPG-ENGVLFTGG----EDRSITAWDTNSGK-VAYCIEDAHSARV 256 (343)
Q Consensus 186 ~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~-i~~~~~~-~~~~l~~~~----~dg~i~i~d~~~~~-~~~~~~~~h~~~v 256 (343)
++++ .|+.|++||+++++.+..+. |... ...+.|. +++.+++++ .|+.|++||+++.. ++......+...+
T Consensus 183 Latgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~ 262 (493)
T PTZ00421 183 LCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSAL 262 (493)
T ss_pred EEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCce
Confidence 9999 89999999999999888776 4433 3345555 445665543 47999999998765 3333331233445
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEc-CCCcEEEEeccCccccCCCcccccccccceeEEEcCC
Q 019326 257 KGIVVLTKNDGGSTAENPYLVASAS-SDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSS 318 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 318 (343)
....|++++. +|++++ .|+.|++||+.++.. .....+....++..+++.|
T Consensus 263 ~~~~~d~d~~---------~L~lggkgDg~Iriwdl~~~~~---~~~~~~~s~~~~~g~~~~p 313 (493)
T PTZ00421 263 FIPFFDEDTN---------LLYIGSKGEGNIRCFELMNERL---TFCSSYSSVEPHKGLCMMP 313 (493)
T ss_pred EEEEEcCCCC---------EEEEEEeCCCeEEEEEeeCCce---EEEeeccCCCCCcceEecc
Confidence 5556777766 888877 599999999997642 1122233333455555544
No 85
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.98 E-value=4.9e-31 Score=201.08 Aligned_cols=276 Identities=17% Similarity=0.234 Sum_probs=223.5
Q ss_pred CeeEEeccCCeEEEEEeecCCCCC-----CCCcc-eeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC
Q 019326 1 MSLIAGSYEKFIWGYKLKPSNHYS-----SDQKT-LTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS 72 (343)
Q Consensus 1 ~~l~~g~~d~~i~vw~~~~~~~~~-----~~~~~-~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~ 72 (343)
+.+++|+.|-.|+|.|++...... .++.+ .....++++-.|..+|+++.|+ ...|++|+.|++|+++|....
T Consensus 125 ~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~ 204 (430)
T KOG0640|consen 125 SLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKT 204 (430)
T ss_pred cEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccH
Confidence 458999999999999998322111 00111 1123567888999999999999 789999999999999999865
Q ss_pred eee---eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee---eeccccEEEEEEecCCCEEE
Q 019326 73 SSL---GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV---KVHKKGVNDLAVHHSGKLAL 146 (343)
Q Consensus 73 ~~~---~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~i~~~~~~~~l~ 146 (343)
... +.|+. ..+|.++.|+|.| .+|+.|....++++||+.+.++...- ..|.+.|+++.+++.+++.+
T Consensus 205 saKrA~K~~qd--~~~vrsiSfHPsG-----efllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYv 277 (430)
T KOG0640|consen 205 SAKRAFKVFQD--TEPVRSISFHPSG-----EFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYV 277 (430)
T ss_pred HHHHHHHHhhc--cceeeeEeecCCC-----ceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEE
Confidence 332 33333 4789999999999 89999999999999999998876554 35889999999999999999
Q ss_pred EEeCCCeEEEEEccCCceeEEEEc---CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcc------eEE
Q 019326 147 TVGRDDCLAMVNLVRGRRSFYHKI---GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKR------ILC 216 (343)
Q Consensus 147 ~~~~d~~i~~wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~------i~~ 216 (343)
+++.||.|++||--+++++..+.. +..|.+..|..+++++++. .|..+++|.+.+++.+..+.+.+. -+.
T Consensus 278 TaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtq 357 (430)
T KOG0640|consen 278 TASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQ 357 (430)
T ss_pred EeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhh
Confidence 999999999999988888765543 3568889999999999999 999999999999999998874321 223
Q ss_pred eeec-CCCeEEEEe-CCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 217 AAPG-ENGVLFTGG-EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 217 ~~~~-~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
..|. ...+++.-. ..+.+.-||.++...+..+..+|.+.+..+.-+|.+. -++++|.|-++|+|--+
T Consensus 358 AvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p---------~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 358 AVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEP---------AFMTCSDDFRARFWYRR 426 (430)
T ss_pred hhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCC---------ceeeecccceeeeeeec
Confidence 3344 345555544 4578999999999888888779999999999999988 89999999999999654
No 86
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.98 E-value=7.6e-30 Score=202.59 Aligned_cols=275 Identities=17% Similarity=0.183 Sum_probs=234.9
Q ss_pred CCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc
Q 019326 43 SPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120 (343)
Q Consensus 43 ~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 120 (343)
..++++... .+.+++|+.|..+.++|..+++.+..+.+| ...|+.+.++++. ..+++++.|..|++|.....
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh-~kki~~v~~~~~~-----~~v~~aSad~~i~vws~~~~ 293 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGH-TKKITSVKFHKDL-----DTVITASADEIIRVWSVPLS 293 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCc-ceEEEEEEeccch-----hheeecCCcceEEeeccccc
Confidence 456777766 389999999999999999999999999999 9999999999998 79999999999999999887
Q ss_pred ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC---CcceEEEEeCCCCEEEEE-eCCcEEE
Q 019326 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG---KEASLIKFDGSGEKFFMV-TEEKVGI 196 (343)
Q Consensus 121 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~i~~ 196 (343)
........|..+|+.+..+|.|.||++++.|++..+.|++++..+...... -...+.+|+|||..|.++ .|+.+++
T Consensus 294 s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vki 373 (506)
T KOG0289|consen 294 SEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKI 373 (506)
T ss_pred cCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEE
Confidence 788888899999999999999999999999999999999999987766654 347889999999999999 9999999
Q ss_pred EEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCC
Q 019326 197 HQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENP 274 (343)
Q Consensus 197 ~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 274 (343)
||+.++..+..|+ |.++|..+.|+ +|-+|+++++|+.|++||++..+...++.......+.++.|...+.
T Consensus 374 wdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt-------- 445 (506)
T KOG0289|consen 374 WDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGT-------- 445 (506)
T ss_pred EEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCC--------
Confidence 9999999998888 88999999999 5668999999999999999999888888744555799999999988
Q ss_pred eEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCC
Q 019326 275 YLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKG 334 (343)
Q Consensus 275 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~ 334 (343)
+|+.++.|=.|++++-.+.. .........+.+..+++.|....++++.++.+...+.
T Consensus 446 -~L~~~g~~l~Vy~~~k~~k~--W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~ 502 (506)
T KOG0289|consen 446 -YLGIAGSDLQVYICKKKTKS--WTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRL 502 (506)
T ss_pred -eEEeecceeEEEEEeccccc--ceeeehhhhcccccceeeecccceEEeeccchhheEE
Confidence 99999888666666543321 1111112233457889999999999998888776543
No 87
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.98 E-value=6.7e-30 Score=202.88 Aligned_cols=262 Identities=18% Similarity=0.167 Sum_probs=226.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.+++|+.|..+.++|... .+.+..++||...|+.+.|+ ...+++++.|..|+||............
T Consensus 233 ~ilTGG~d~~av~~d~~s------------~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~ 300 (506)
T KOG0289|consen 233 KILTGGEDKTAVLFDKPS------------NQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSR 300 (506)
T ss_pred cceecCCCCceEEEecch------------hhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccc
Confidence 467899999999999887 46677889999999999999 6789999999999999999888888888
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeec--cccEEEEEEecCCCEEEEEeCCCeEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVH--KKGVNDLAVHHSGKLALTVGRDDCLAMV 157 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~i~~~~~~~~l~~~~~d~~i~~w 157 (343)
.| ..+|+.+..+|.+ .||++++.|++..+.|++++.++...... .-.+++.+|+|||..|.+|..|+.+++|
T Consensus 301 ~h-~~~V~~ls~h~tg-----eYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiw 374 (506)
T KOG0289|consen 301 PH-EEPVTGLSLHPTG-----EYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIW 374 (506)
T ss_pred cc-cccceeeeeccCC-----cEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEE
Confidence 99 9999999999999 89999999999999999999888776642 2368999999999999999999999999
Q ss_pred EccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecC--CcceEEeeec-CCCeEEEEeCCC
Q 019326 158 NLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG--KKRILCAAPG-ENGVLFTGGEDR 232 (343)
Q Consensus 158 d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~--~~~i~~~~~~-~~~~l~~~~~dg 232 (343)
|+..+..+..+. +..+|..++|+.+|.+++++ .|+.|++||++..+..+++.. ..++.++.|. .+.+|++++.|=
T Consensus 375 dlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l 454 (506)
T KOG0289|consen 375 DLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDL 454 (506)
T ss_pred EcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeeccee
Confidence 999887554443 55889999999999999999 778899999999998888873 3469999998 467999988777
Q ss_pred cEEEEECC--CCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 233 SITAWDTN--SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 233 ~i~i~d~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
.|++++-. +...+..+. .|.+..+++.|..... +++++|.|..++++.+
T Consensus 455 ~Vy~~~k~~k~W~~~~~~~-~~sg~st~v~Fg~~aq---------~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 455 QVYICKKKTKSWTEIKELA-DHSGLSTGVRFGEHAQ---------YLASTSMDAILRLYAL 505 (506)
T ss_pred EEEEEecccccceeeehhh-hcccccceeeecccce---------EEeeccchhheEEeec
Confidence 77777633 456777777 7888999999988877 9999999999988764
No 88
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=3e-29 Score=191.02 Aligned_cols=265 Identities=17% Similarity=0.178 Sum_probs=210.6
Q ss_pred CCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC
Q 019326 41 HLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD 118 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 118 (343)
....|.+|.|+ ++.|+++++||++++||.........++ | ..++.+++|.+.. .+++|+.||.|+.+|+.
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~-~~plL~c~F~d~~------~~~~G~~dg~vr~~Dln 83 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-H-GAPLLDCAFADES------TIVTGGLDGQVRRYDLN 83 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-c-CCceeeeeccCCc------eEEEeccCceEEEEEec
Confidence 46789999999 7788888899999999999886666665 4 6999999999865 89999999999999998
Q ss_pred CcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEE
Q 019326 119 PFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIH 197 (343)
Q Consensus 119 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~ 197 (343)
+++. ..+..|..+|.+|.+.+....+++|+.|++|++||.+.............|.++. -.++.|+++ .+..+.+|
T Consensus 84 ~~~~-~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~--v~g~~LvVg~~~r~v~iy 160 (323)
T KOG1036|consen 84 TGNE-DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMD--VSGNRLVVGTSDRKVLIY 160 (323)
T ss_pred CCcc-eeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEe--ccCCEEEEeecCceEEEE
Confidence 8654 4455699999999999988899999999999999999866655666666555554 467788886 99999999
Q ss_pred EcccceeEEEec---CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCC----ceeEEeccccc---------ccEEEEE
Q 019326 198 QAEDAKLLCELD---GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSG----KVAYCIEDAHS---------ARVKGIV 260 (343)
Q Consensus 198 d~~~~~~~~~~~---~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~h~---------~~v~~~~ 260 (343)
|+++.....+.. ....+.|+++.+ +.-+++++-||.|.+=.+... +.-..++ .|. -+|++|+
T Consensus 161 DLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFk-CHr~~~~~~~~~yPVNai~ 239 (323)
T KOG1036|consen 161 DLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFK-CHRLSEKDTEIIYPVNAIA 239 (323)
T ss_pred EcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEE-eeecccCCceEEEEeceeE
Confidence 999876655332 556788888775 456778889999988666544 2334444 453 4899999
Q ss_pred EEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 261 VLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
|+|-.. .|+||+.||.|.+||+.+.++.. .+..+ ...|..++|+.+|..++.+..-.
T Consensus 240 Fhp~~~---------tfaTgGsDG~V~~Wd~~~rKrl~--q~~~~--~~SI~slsfs~dG~~LAia~sy~ 296 (323)
T KOG1036|consen 240 FHPIHG---------TFATGGSDGIVNIWDLFNRKRLK--QLAKY--ETSISSLSFSMDGSLLAIASSYQ 296 (323)
T ss_pred eccccc---------eEEecCCCceEEEccCcchhhhh--hccCC--CCceEEEEeccCCCeEEEEechh
Confidence 999977 89999999999999999876433 22223 34599999999999998876544
No 89
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=2.5e-30 Score=214.97 Aligned_cols=269 Identities=15% Similarity=0.241 Sum_probs=222.7
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeE-EeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC--eeeeE
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLT-QLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS--SSLGA 77 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~--~~~~~ 77 (343)
|++|+.||.|++|+... .....-. ...+++.|.++|+.++.. ++.|++++.|-+|++|+...+ -+...
T Consensus 40 LfTgGRDg~i~~W~~~~-------d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~st 112 (735)
T KOG0308|consen 40 LFTGGRDGIIRLWSVTQ-------DSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMST 112 (735)
T ss_pred EEecCCCceEEEecccc-------ccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhh
Confidence 89999999999999876 2222112 467788899999999987 789999999999999999887 57778
Q ss_pred eccCCCCCeEEEEE-eCCCCCCCCceEEEeeCCCeEEEEECCCc--ceeee--------ee-eccccEEEEEEecCCCEE
Q 019326 78 IHHHESSSVTSLAF-YTPQNLSVPRNLFSTSADGFVSIFDADPF--VLLTS--------VK-VHKKGVNDLAVHHSGKLA 145 (343)
Q Consensus 78 ~~~~~~~~v~~l~~-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~--------~~-~~~~~v~~i~~~~~~~~l 145 (343)
+..| ...|.|+++ .++. .++++|+.|+.|.+||+.++ +.+.+ +. ++...|.+++.++.|..+
T Consensus 113 ir~H-~DYVkcla~~ak~~-----~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~i 186 (735)
T KOG0308|consen 113 IRTH-KDYVKCLAYIAKNN-----ELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTII 186 (735)
T ss_pred hhcc-cchheeeeecccCc-----eeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEE
Confidence 8889 999999999 6665 79999999999999999876 22222 22 678899999999999999
Q ss_pred EEEeCCCeEEEEEccCCceeEEE-EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecCC
Q 019326 146 LTVGRDDCLAMVNLVRGRRSFYH-KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGEN 222 (343)
Q Consensus 146 ~~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~ 222 (343)
++|+.++.+++||.++.+.+... .+...|..+..+++|..++++ +|+.|++||+...+++.++. |...+.++..++.
T Consensus 187 vsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~s 266 (735)
T KOG0308|consen 187 VSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPS 266 (735)
T ss_pred EecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCC
Confidence 99999999999999998866544 556789999999999999999 99999999999999999987 8888999988754
Q ss_pred -CeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 223 -GVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 223 -~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
..+++|+.||.|..=|+++......+- ....+|..+..+...+ -+.+++.|+.|+-|..+..
T Consensus 267 f~~vYsG~rd~~i~~Tdl~n~~~~tlic-k~daPv~~l~~~~~~~---------~~WvtTtds~I~rW~~~~~ 329 (735)
T KOG0308|consen 267 FTHVYSGGRDGNIYRTDLRNPAKSTLIC-KEDAPVLKLHLHEHDN---------SVWVTTTDSSIKRWKLEPD 329 (735)
T ss_pred cceEEecCCCCcEEecccCCchhheEee-cCCCchhhhhhccccC---------CceeeeccccceecCCccc
Confidence 699999999999999999854333332 3566777777775554 4577778899999977643
No 90
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=2.9e-30 Score=191.47 Aligned_cols=222 Identities=18% Similarity=0.207 Sum_probs=186.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
++++++.||++++||+.. +-.|++.++.|...|.++.|+ +..+++++.|++|++|+...++.+.++
T Consensus 75 ~~~~a~GDGSLrl~d~~~-----------~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf 143 (311)
T KOG0277|consen 75 QVIAASGDGSLRLFDLTM-----------PSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTF 143 (311)
T ss_pred eEEEEecCceEEEeccCC-----------CCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEee
Confidence 578999999999999654 245888999999999999999 778888999999999999999999999
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEec-CCCEEEEEeCCCeEEEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH-SGKLALTVGRDDCLAMV 157 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~d~~i~~w 157 (343)
.+| ...|....|+|.. ++++++++.|+++++||++..-....+..|...+.++.|+. +.+.+++|+.|+.|+.|
T Consensus 144 ~gh-~~~Iy~a~~sp~~----~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~w 218 (311)
T KOG0277|consen 144 NGH-NSCIYQAAFSPHI----PNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGW 218 (311)
T ss_pred cCC-ccEEEEEecCCCC----CCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEE
Confidence 999 9999999999988 58999999999999999965433444888999999999987 45789999999999999
Q ss_pred EccCCceeE-E-EEcCCcceEEEEeCCCC-EEEEE-eCCcEEEEEcccce-eEEEec-CCcceEEeeec--CCCeEEEEe
Q 019326 158 NLVRGRRSF-Y-HKIGKEASLIKFDGSGE-KFFMV-TEEKVGIHQAEDAK-LLCELD-GKKRILCAAPG--ENGVLFTGG 229 (343)
Q Consensus 158 d~~~~~~~~-~-~~~~~~~~~~~~~~~~~-~~~~~-~~~~i~~~d~~~~~-~~~~~~-~~~~i~~~~~~--~~~~l~~~~ 229 (343)
|++.-+... . ..+.-.|..++|+|... .++++ .|-++++||...+. .+.+.. |..-+..+.|+ ...++++++
T Consensus 219 Dir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~g 298 (311)
T KOG0277|consen 219 DIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTG 298 (311)
T ss_pred ehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecc
Confidence 999876432 2 22345688899999765 45555 89999999998543 444555 55667778888 578999999
Q ss_pred CCCcEEEEEC
Q 019326 230 EDRSITAWDT 239 (343)
Q Consensus 230 ~dg~i~i~d~ 239 (343)
.|+.++||+.
T Consensus 299 WDe~l~Vw~p 308 (311)
T KOG0277|consen 299 WDELLYVWNP 308 (311)
T ss_pred cccceeeecc
Confidence 9999999984
No 91
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.97 E-value=3.7e-29 Score=209.44 Aligned_cols=258 Identities=18% Similarity=0.215 Sum_probs=218.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEE-EEec---CceEEEeeCCCeEEEEEcCCCeeeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITT-VAVS---GTAAASGGTDDTIHLYDLSTSSSLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~ 77 (343)
.+++++.||++++|+-.. ........+.+|.+.|.+ ++|. +..+++|+.|.+|.+|...+..++..
T Consensus 27 ~i~s~sRd~t~~vw~~~~----------~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~ 96 (745)
T KOG0301|consen 27 CIISGSRDGTVKVWAKKG----------KQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYT 96 (745)
T ss_pred EEeecCCCCceeeeeccC----------cccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhh
Confidence 378899999999999754 224455667788888887 7776 46799999999999999999999999
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEE
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMV 157 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~w 157 (343)
+.+| ...|.+++...++ .+++|+.|.++++|... ++...+++|...|++++..|.+ .+++|+.|.+|++|
T Consensus 97 LkgH-~snVC~ls~~~~~------~~iSgSWD~TakvW~~~--~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklW 166 (745)
T KOG0301|consen 97 LKGH-KSNVCSLSIGEDG------TLISGSWDSTAKVWRIG--ELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLW 166 (745)
T ss_pred hhcc-ccceeeeecCCcC------ceEecccccceEEecch--hhhcccCCcchheeeeeecCCC-cEEeccCcceeeec
Confidence 9999 9999999988777 59999999999999764 5677799999999999999987 89999999999999
Q ss_pred EccCCceeEEE-EcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeee-cCCCeEEEEeCCCcEE
Q 019326 158 NLVRGRRSFYH-KIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAP-GENGVLFTGGEDRSIT 235 (343)
Q Consensus 158 d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~ 235 (343)
.- ++.+..+ .+..-|..+++-+++.++-++.||.|+.|++..........|..-+.++.. .+++.++++++|++++
T Consensus 167 k~--~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlr 244 (745)
T KOG0301|consen 167 KG--GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLR 244 (745)
T ss_pred cC--CchhhhhccchhheeeeEEecCCCeEeecCCceEEEEeccCceeeeeeccceEEEEEEecCCCCeEEEecCCceEE
Confidence 86 3433333 356778999999988888777999999999955555566669999999994 4788999999999999
Q ss_pred EEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 236 i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
+|+.. ++.+.+. .....|+++.+.++++ +++|++||.||||..+..
T Consensus 245 iW~~~--e~~q~I~-lPttsiWsa~~L~NgD----------Ivvg~SDG~VrVfT~~k~ 290 (745)
T KOG0301|consen 245 IWKKD--ECVQVIT-LPTTSIWSAKVLLNGD----------IVVGGSDGRVRVFTVDKD 290 (745)
T ss_pred EeecC--ceEEEEe-cCccceEEEEEeeCCC----------EEEeccCceEEEEEeccc
Confidence 99976 7778887 4455999999999986 999999999999988743
No 92
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=3.9e-29 Score=208.29 Aligned_cols=269 Identities=19% Similarity=0.183 Sum_probs=226.4
Q ss_pred EEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee
Q 019326 48 VAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV 126 (343)
Q Consensus 48 l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 126 (343)
+.|+ .+.|++|. ...|.+|+..+++.......+ ...|+++.|++++ .+|++|..+|.|.|||..+.+.+..+
T Consensus 183 ldWss~n~laVal-g~~vylW~~~s~~v~~l~~~~-~~~vtSv~ws~~G-----~~LavG~~~g~v~iwD~~~~k~~~~~ 255 (484)
T KOG0305|consen 183 LDWSSANVLAVAL-GQSVYLWSASSGSVTELCSFG-EELVTSVKWSPDG-----SHLAVGTSDGTVQIWDVKEQKKTRTL 255 (484)
T ss_pred hhcccCCeEEEEe-cceEEEEecCCCceEEeEecC-CCceEEEEECCCC-----CEEEEeecCCeEEEEehhhccccccc
Confidence 3455 56777766 457999999999877666666 7999999999999 89999999999999999999999999
Q ss_pred ee-ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEE--EEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc
Q 019326 127 KV-HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFY--HKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA 202 (343)
Q Consensus 127 ~~-~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~ 202 (343)
.+ |...|.+++|. +..+.+|+.++.|..+|++..+.... ..+...|..++|++++.+++.+ .|+.+.|||....
T Consensus 256 ~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~ 333 (484)
T KOG0305|consen 256 RGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP 333 (484)
T ss_pred cCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCc
Confidence 98 99999999998 56899999999999999998875443 4466889999999999999999 9999999999777
Q ss_pred eeEEEec-CCcceEEeeecC--CCeEEEEe--CCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEE
Q 019326 203 KLLCELD-GKKRILCAAPGE--NGVLFTGG--EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLV 277 (343)
Q Consensus 203 ~~~~~~~-~~~~i~~~~~~~--~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l 277 (343)
.+...+. |...|.+++|+| .++||+|+ .|++|++||..+++.+..+. -...|..|.|++...+ ++
T Consensus 334 ~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd--tgsQVcsL~Wsk~~kE--------i~ 403 (484)
T KOG0305|consen 334 EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD--TGSQVCSLIWSKKYKE--------LL 403 (484)
T ss_pred cccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc--cCCceeeEEEcCCCCE--------EE
Confidence 7766665 999999999994 67899875 59999999999999999987 7789999999999862 33
Q ss_pred EE-EcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 278 AS-ASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 278 ~s-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
.+ |-.++.|.||++.+.+... ....+..+|..+++|||+..++.+.+|+.++.++.-.
T Consensus 404 sthG~s~n~i~lw~~ps~~~~~----~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 404 STHGYSENQITLWKYPSMKLVA----ELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred EecCCCCCcEEEEeccccceee----eecCCcceeEEEEECCCCCEEEEecccCcEEeccccC
Confidence 33 3456789999999853222 2235567899999999999999999999988766533
No 93
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=3e-29 Score=192.14 Aligned_cols=274 Identities=15% Similarity=0.195 Sum_probs=228.4
Q ss_pred eeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee
Q 019326 30 LTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS 107 (343)
Q Consensus 30 ~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~ 107 (343)
..+..+..+.||.+.|..++.. ...+.+++.|.+.+||.+++++++..+.+| .+.|+++.|++.+ .++++++
T Consensus 136 ~~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH-~GSVNsikfh~s~-----~L~lTaS 209 (481)
T KOG0300|consen 136 VKFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGH-TGSVNSIKFHNSG-----LLLLTAS 209 (481)
T ss_pred eeEeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeeccc-ccceeeEEecccc-----ceEEEcc
Confidence 3566778889999999999987 568999999999999999999999999999 9999999999998 7999999
Q ss_pred CCCeEEEEECC------C----------------------------------cceeeeeeeccccEEEEEEecCCCEEEE
Q 019326 108 ADGFVSIFDAD------P----------------------------------FVLLTSVKVHKKGVNDLAVHHSGKLALT 147 (343)
Q Consensus 108 ~dg~i~iwd~~------~----------------------------------~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 147 (343)
.|++..||... . ..++..+.+|.+.|.+..|...|+.+++
T Consensus 210 GD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vT 289 (481)
T KOG0300|consen 210 GDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVT 289 (481)
T ss_pred CCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeee
Confidence 99999999620 0 0235567789999999999999999999
Q ss_pred EeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc-eeEEEec-CCcceEEeeecCCC
Q 019326 148 VGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA-KLLCELD-GKKRILCAAPGENG 223 (343)
Q Consensus 148 ~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~-~~~~~~~-~~~~i~~~~~~~~~ 223 (343)
++.|.+..+||++++..+.... +......++-+|..++++++ .|.+.++||++.. ..+..|+ |...|++..|..+.
T Consensus 290 aSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd 369 (481)
T KOG0300|consen 290 ASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD 369 (481)
T ss_pred eeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC
Confidence 9999999999999999877654 45778889999999999999 8999999999843 3345555 88899999998888
Q ss_pred eEEEEeCCCcEEEEECCCCc-eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcc
Q 019326 224 VLFTGGEDRSITAWDTNSGK-VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPL 302 (343)
Q Consensus 224 ~l~~~~~dg~i~i~d~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 302 (343)
.+++|++|.+|++||+++.. ++.++. ...+++.++++...+ .|+.--.+..|++||++..........
T Consensus 370 ~vVSgSDDrTvKvWdLrNMRsplATIR--tdS~~NRvavs~g~~---------iIAiPhDNRqvRlfDlnG~RlaRlPrt 438 (481)
T KOG0300|consen 370 RVVSGSDDRTVKVWDLRNMRSPLATIR--TDSPANRVAVSKGHP---------IIAIPHDNRQVRLFDLNGNRLARLPRT 438 (481)
T ss_pred ceeecCCCceEEEeeeccccCcceeee--cCCccceeEeecCCc---------eEEeccCCceEEEEecCCCccccCCcc
Confidence 99999999999999999864 677777 778999999998877 788888888999999987533222222
Q ss_pred cccccccceeEEEcCCCC
Q 019326 303 AEAKTNSRLTCLAGSSTK 320 (343)
Q Consensus 303 ~~~~~~~~i~~~~~s~~~ 320 (343)
..-.+..-|.|.+|..+.
T Consensus 439 sRqgHrRMV~c~AW~eeh 456 (481)
T KOG0300|consen 439 SRQGHRRMVTCCAWLEEH 456 (481)
T ss_pred cccccceeeeeeeccccC
Confidence 223344568999997653
No 94
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.97 E-value=1.7e-29 Score=204.79 Aligned_cols=270 Identities=16% Similarity=0.157 Sum_probs=208.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeee---
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLG--- 76 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~--- 76 (343)
||++|+.|..|++||+..+.. ....++.+.- .....|++++|+ ++.|++.+.....+++|-+..+...
T Consensus 181 R~~sGs~Dy~v~~wDf~gMda-----s~~~fr~l~P--~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~K 253 (641)
T KOG0772|consen 181 RFVSGSLDYTVKFWDFQGMDA-----SMRSFRQLQP--CETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSK 253 (641)
T ss_pred eeeeccccceEEEEecccccc-----cchhhhccCc--ccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeec
Confidence 799999999999999986321 1111222322 345589999999 8888888888899999976433222
Q ss_pred ---------EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc-eeeeee-----eccccEEEEEEecC
Q 019326 77 ---------AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV-LLTSVK-----VHKKGVNDLAVHHS 141 (343)
Q Consensus 77 ---------~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~-----~~~~~v~~i~~~~~ 141 (343)
..++| ...++|.+|+|... ..+++++.||++++||+...+ ..+.++ +..-+++.++|+++
T Consensus 254 GDQYI~Dm~nTKGH-ia~lt~g~whP~~k----~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrd 328 (641)
T KOG0772|consen 254 GDQYIRDMYNTKGH-IAELTCGCWHPDNK----EEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRD 328 (641)
T ss_pred cchhhhhhhccCCc-eeeeeccccccCcc----cceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCC
Confidence 22577 89999999999984 789999999999999996543 344443 22347899999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCcee--E--EEEcC--CcceEEEEeCCCCEEEEE-eCCcEEEEEccccee-EEEe---cC
Q 019326 142 GKLALTVGRDDCLAMVNLVRGRRS--F--YHKIG--KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKL-LCEL---DG 210 (343)
Q Consensus 142 ~~~l~~~~~d~~i~~wd~~~~~~~--~--~~~~~--~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~-~~~~---~~ 210 (343)
++.|++|+.||.|.+|+......- . ...+. ..++++.|+++|++|++- .|+.+++||+++.+. +... ..
T Consensus 329 g~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t 408 (641)
T KOG0772|consen 329 GKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPT 408 (641)
T ss_pred cchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCc
Confidence 999999999999999998544321 1 12222 479999999999999999 999999999998653 3332 25
Q ss_pred CcceEEeeecC-CCeEEEEeC------CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC
Q 019326 211 KKRILCAAPGE-NGVLFTGGE------DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD 283 (343)
Q Consensus 211 ~~~i~~~~~~~-~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d 283 (343)
..+-+.++|++ ..++++|+. .|.+.+||..+.+.++.+. -....|..+.|+|.-+ .|..|+.|
T Consensus 409 ~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~-i~~aSvv~~~WhpkLN---------Qi~~gsgd 478 (641)
T KOG0772|consen 409 PFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKID-ISTASVVRCLWHPKLN---------QIFAGSGD 478 (641)
T ss_pred cCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEec-CCCceEEEEeecchhh---------heeeecCC
Confidence 56678889985 467777763 5789999999999999998 6688899999999987 89999999
Q ss_pred CcEEEE-eccC
Q 019326 284 GVICVW-DVRM 293 (343)
Q Consensus 284 g~i~vw-d~~~ 293 (343)
|+++|+ |-..
T Consensus 479 G~~~vyYdp~~ 489 (641)
T KOG0772|consen 479 GTAHVYYDPNE 489 (641)
T ss_pred CceEEEECccc
Confidence 999986 5544
No 95
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.97 E-value=4.3e-29 Score=190.55 Aligned_cols=281 Identities=17% Similarity=0.263 Sum_probs=226.0
Q ss_pred EEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC------------------eeeeEeccCCCCCeEEEEEeCCC
Q 019326 36 FSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS------------------SSLGAIHHHESSSVTSLAFYTPQ 95 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~------------------~~~~~~~~~~~~~v~~l~~~~~~ 95 (343)
..+..|++++.+-+|+ |.++|+|+.|..|+|.|++.. -.++++..| ..+|+++.|+|..
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH-~devn~l~FHPre 184 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDH-VDEVNDLDFHPRE 184 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhc-cCcccceeecchh
Confidence 3445799999999999 999999999999999998721 246677788 8999999999998
Q ss_pred CCCCCceEEEeeCCCeEEEEECCCcceeeeee--eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE----E
Q 019326 96 NLSVPRNLFSTSADGFVSIFDADPFVLLTSVK--VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH----K 169 (343)
Q Consensus 96 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~----~ 169 (343)
..|++|+.|++|+++|+......+.++ ....+|.+|.|+|.|.+|++|..-.++++||+++-++.... .
T Consensus 185 -----~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~q 259 (430)
T KOG0640|consen 185 -----TILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQ 259 (430)
T ss_pred -----heEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccc
Confidence 799999999999999996543333322 24468999999999999999999999999999998865433 3
Q ss_pred cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec---CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCce
Q 019326 170 IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD---GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKV 244 (343)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~ 244 (343)
+...|.++.+++.++..+++ .||.|++||--+++++.++. ....|.+..|. +++++++.+.|..+++|.+.++++
T Consensus 260 ht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~ 339 (430)
T KOG0640|consen 260 HTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRM 339 (430)
T ss_pred cccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCce
Confidence 44678999999999999999 99999999999999999887 34678888888 678999999999999999999999
Q ss_pred eEEeccccc-----ccEEEEEEEecCCCCCCCCCCeEEEEEcC-CCcEEEEeccCccccCCCcccccccccceeEEEcCC
Q 019326 245 AYCIEDAHS-----ARVKGIVVLTKNDGGSTAENPYLVASASS-DGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSS 318 (343)
Q Consensus 245 ~~~~~~~h~-----~~v~~~~~~~~~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 318 (343)
+.++. +.. ..-+...|+...+ +++.-.+ .+.+.-||.++..+.. +....+++.+.++.-||
T Consensus 340 l~~Yt-GAg~tgrq~~rtqAvFNhtEd---------yVl~pDEas~slcsWdaRtadr~~---l~slgHn~a~R~i~HSP 406 (430)
T KOG0640|consen 340 LKEYT-GAGTTGRQKHRTQAVFNHTED---------YVLFPDEASNSLCSWDARTADRVA---LLSLGHNGAVRWIVHSP 406 (430)
T ss_pred EEEEe-cCCcccchhhhhhhhhcCccc---------eEEccccccCceeeccccchhhhh---hcccCCCCCceEEEeCC
Confidence 99988 331 1112334555444 6655543 4789999999985443 34556778899999999
Q ss_pred CCceeccccCCCCCCCc
Q 019326 319 TKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 319 ~~~~~~~~~~~~~~~~~ 335 (343)
.+.-....+.|-..+-+
T Consensus 407 ~~p~FmTcsdD~raRFW 423 (430)
T KOG0640|consen 407 VEPAFMTCSDDFRARFW 423 (430)
T ss_pred CCCceeeecccceeeee
Confidence 99887777777666544
No 96
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=2.8e-29 Score=214.82 Aligned_cols=204 Identities=17% Similarity=0.232 Sum_probs=170.1
Q ss_pred eeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 31 TLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
.-+|+..+.||.+.|..|.|+ .++|++++.|.+||+|++...+++..|. | ..-|+|++|+|.+. ++|++|+.|
T Consensus 358 ~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-H-ndfVTcVaFnPvDD----ryFiSGSLD 431 (712)
T KOG0283|consen 358 SEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-H-NDFVTCVAFNPVDD----RYFISGSLD 431 (712)
T ss_pred cccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe-c-CCeeEEEEecccCC----CcEeecccc
Confidence 345678899999999999999 9999999999999999999999999997 5 69999999999984 899999999
Q ss_pred CeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc---------CCcceEEEEe
Q 019326 110 GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI---------GKEASLIKFD 180 (343)
Q Consensus 110 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---------~~~~~~~~~~ 180 (343)
|.|+||++...+.+. +..-..-|++++|.|+|+..++|+.+|.+++|+....+....... ...|+.+.+.
T Consensus 432 ~KvRiWsI~d~~Vv~-W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~ 510 (712)
T KOG0283|consen 432 GKVRLWSISDKKVVD-WNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFF 510 (712)
T ss_pred cceEEeecCcCeeEe-ehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEec
Confidence 999999998855444 333458899999999999999999999999999987765433322 2368999998
Q ss_pred CCCC--EEEEEeCCcEEEEEcccceeEEEecCC---cceEEeeec-CCCeEEEEeCCCcEEEEECCC
Q 019326 181 GSGE--KFFMVTEEKVGIHQAEDAKLLCELDGK---KRILCAAPG-ENGVLFTGGEDRSITAWDTNS 241 (343)
Q Consensus 181 ~~~~--~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~ 241 (343)
|... .|++..|..|+|||.++..++..+++. ..-....|+ ++++++++++|..|++|+...
T Consensus 511 p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 511 PGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred CCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence 7554 666669999999999998888888722 222333444 889999999999999999743
No 97
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.7e-28 Score=187.03 Aligned_cols=248 Identities=19% Similarity=0.266 Sum_probs=201.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
.|++++.||.+++|++.. ......+ .|..|+.+++|. ...+++|+.||.|+.+|+.++... .+..
T Consensus 27 ~LLvssWDgslrlYdv~~------------~~l~~~~-~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~-~igt 92 (323)
T KOG1036|consen 27 DLLVSSWDGSLRLYDVPA------------NSLKLKF-KHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNED-QIGT 92 (323)
T ss_pred cEEEEeccCcEEEEeccc------------hhhhhhe-ecCCceeeeeccCCceEEEeccCceEEEEEecCCcce-eecc
Confidence 488999999999999987 2222333 489999999999 789999999999999999987654 4556
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
| ..+|.|+.+++.. ..+++|+.|++|++||.+.......+.. ...|.++... ++.|++|+.+..+.+||++
T Consensus 93 h-~~~i~ci~~~~~~-----~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~v~--g~~LvVg~~~r~v~iyDLR 163 (323)
T KOG1036|consen 93 H-DEGIRCIEYSYEV-----GCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMDVS--GNRLVVGTSDRKVLIYDLR 163 (323)
T ss_pred C-CCceEEEEeeccC-----CeEEEcccCccEEEEecccccccccccc-CceEEEEecc--CCEEEEeecCceEEEEEcc
Confidence 7 8999999999877 6899999999999999987666666653 3478877765 6699999999999999999
Q ss_pred CCceeE---EEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc----eeEEEec-C---------CcceEEeeecC-
Q 019326 161 RGRRSF---YHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA----KLLCELD-G---------KKRILCAAPGE- 221 (343)
Q Consensus 161 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~----~~~~~~~-~---------~~~i~~~~~~~- 221 (343)
+..... ...+.-++.++++-|++.-++++ -+|.+.+=.+... +....++ | -.+|++++|++
T Consensus 164 n~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~ 243 (323)
T KOG1036|consen 164 NLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPI 243 (323)
T ss_pred cccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccc
Confidence 877554 44556788999999988877777 8999988666554 2222222 2 25799999996
Q ss_pred CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcC
Q 019326 222 NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASS 282 (343)
Q Consensus 222 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 282 (343)
-+.|++|+.||.|.+||+.+.+.+..+. .-...|.+++|+.++. .||.++.
T Consensus 244 ~~tfaTgGsDG~V~~Wd~~~rKrl~q~~-~~~~SI~slsfs~dG~---------~LAia~s 294 (323)
T KOG1036|consen 244 HGTFATGGSDGIVNIWDLFNRKRLKQLA-KYETSISSLSFSMDGS---------LLAIASS 294 (323)
T ss_pred cceEEecCCCceEEEccCcchhhhhhcc-CCCCceEEEEeccCCC---------eEEEEec
Confidence 4789999999999999999999999988 6678899999999988 8888864
No 98
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.97 E-value=5.6e-27 Score=194.61 Aligned_cols=279 Identities=13% Similarity=0.171 Sum_probs=207.8
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceE-EEeeCCCeEEEEEcCCCeeeeEec
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAA-ASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l-~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
+++++.|+.|++||+.+ .+....+..|. .+.+++|+ +..+ ++++.++.|++||..+++....+.
T Consensus 4 ~~s~~~d~~v~~~d~~t------------~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 70 (300)
T TIGR03866 4 YVSNEKDNTISVIDTAT------------LEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLP 70 (300)
T ss_pred EEEecCCCEEEEEECCC------------CceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEecc
Confidence 67889999999999876 22344445444 36778998 5555 567789999999999998887776
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEE-EeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCC-eEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLF-STSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD-CLAMV 157 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~-~i~~w 157 (343)
.+ ..+..++|+|++ +.++ ++..++.|++||+.+.+.+..+.. ...+.+++|+|++.++++++.++ .+.+|
T Consensus 71 ~~--~~~~~~~~~~~g-----~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~ 142 (300)
T TIGR03866 71 SG--PDPELFALHPNG-----KILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFI 142 (300)
T ss_pred CC--CCccEEEECCCC-----CEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEE
Confidence 55 345678999998 5554 456689999999998877777653 34568899999999999888765 56778
Q ss_pred EccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEecCC------c--ceEEeeecC-CCeE-
Q 019326 158 NLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELDGK------K--RILCAAPGE-NGVL- 225 (343)
Q Consensus 158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~------~--~i~~~~~~~-~~~l- 225 (343)
|.++++..........+..++|+|+++.++++ .++.+.+||+++++....+... . ....+.+++ ++++
T Consensus 143 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~ 222 (300)
T TIGR03866 143 DTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAF 222 (300)
T ss_pred eCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEE
Confidence 99888766555556667889999999988655 5899999999998877765421 1 233566774 4554
Q ss_pred EEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEE-cCCCcEEEEeccCccccCCCcccc
Q 019326 226 FTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASA-SSDGVICVWDVRMAIKEKPLPLAE 304 (343)
Q Consensus 226 ~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~ 304 (343)
++.+.++.+.+||.++++....+. +...+.+++|+|++. +|+++ +.+|.|++||++++.... .
T Consensus 223 ~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~g~---------~l~~~~~~~~~i~v~d~~~~~~~~-----~ 286 (300)
T TIGR03866 223 VALGPANRVAVVDAKTYEVLDYLL--VGQRVWQLAFTPDEK---------YLLTTNGVSNDVSVIDVAALKVIK-----S 286 (300)
T ss_pred EEcCCCCeEEEEECCCCcEEEEEE--eCCCcceEEECCCCC---------EEEEEcCCCCeEEEEECCCCcEEE-----E
Confidence 444557789999999888776665 456789999999887 78776 568999999999875332 2
Q ss_pred cccccceeEEEcCC
Q 019326 305 AKTNSRLTCLAGSS 318 (343)
Q Consensus 305 ~~~~~~i~~~~~s~ 318 (343)
+..+...+.++++|
T Consensus 287 ~~~~~~~~~~~~~~ 300 (300)
T TIGR03866 287 IKVGRLPWGVVVRP 300 (300)
T ss_pred EEcccccceeEeCC
Confidence 33344567777654
No 99
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.97 E-value=8e-29 Score=197.89 Aligned_cols=238 Identities=18% Similarity=0.230 Sum_probs=191.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCe-----
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSS----- 73 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~----- 73 (343)
-+++++..+.|+|||...-...+... .++.+...+.||.+.=.+|+|+ ...|++++.|+.|++||+....
T Consensus 139 iVAt~t~~~dv~Vfd~tk~~s~~~~~--~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~ 216 (422)
T KOG0264|consen 139 IVATKTSSGDVYVFDYTKHPSKPKAS--GECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKV 216 (422)
T ss_pred EEEecCCCCCEEEEEeccCCCccccc--ccCCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCcc
Confidence 36778899999999997633221111 1567778889999988899999 6789999999999999997542
Q ss_pred --eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC--CcceeeeeeeccccEEEEEEecC-CCEEEEE
Q 019326 74 --SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD--PFVLLTSVKVHKKGVNDLAVHHS-GKLALTV 148 (343)
Q Consensus 74 --~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~ 148 (343)
....+.+| ...|..++|++... .+|++++.|+.+.|||++ +.++.....+|.+.|.|++|+|- +..||+|
T Consensus 217 ~~p~~~~~~h-~~~VeDV~~h~~h~----~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~ 291 (422)
T KOG0264|consen 217 VDPKTIFSGH-EDVVEDVAWHPLHE----DLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATG 291 (422)
T ss_pred ccceEEeecC-Ccceehhhccccch----hhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEec
Confidence 34567888 99999999999873 789999999999999999 66777888899999999999994 5788999
Q ss_pred eCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec-CCcceEEeeecC--CCeE
Q 019326 149 GRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE--NGVL 225 (343)
Q Consensus 149 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~--~~~l 225 (343)
+.|++|++||+|+... ++..+. |...|.++.|++ ...|
T Consensus 292 S~D~tV~LwDlRnL~~---------------------------------------~lh~~e~H~dev~~V~WSPh~etvL 332 (422)
T KOG0264|consen 292 SADKTVALWDLRNLNK---------------------------------------PLHTFEGHEDEVFQVEWSPHNETVL 332 (422)
T ss_pred cCCCcEEEeechhccc---------------------------------------CceeccCCCcceEEEEeCCCCCcee
Confidence 9999999999987652 222333 667778888874 4589
Q ss_pred EEEeCCCcEEEEECCCC--------------ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 226 FTGGEDRSITAWDTNSG--------------KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 226 ~~~~~dg~i~i~d~~~~--------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
++++.|+.+.+||+..- +++..-- ||...|..+.|+|..+ ..|+|.+.|+.+.||+.
T Consensus 333 ASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~Hg-GH~~kV~DfsWnp~eP--------W~I~SvaeDN~LqIW~~ 403 (422)
T KOG0264|consen 333 ASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHG-GHTAKVSDFSWNPNEP--------WTIASVAEDNILQIWQM 403 (422)
T ss_pred EecccCCcEEEEeccccccccChhhhccCCcceeEEec-CcccccccccCCCCCC--------eEEEEecCCceEEEeec
Confidence 99999999999998642 2233334 8999999999999876 37899999999999999
Q ss_pred cCc
Q 019326 292 RMA 294 (343)
Q Consensus 292 ~~~ 294 (343)
...
T Consensus 404 s~~ 406 (422)
T KOG0264|consen 404 AEN 406 (422)
T ss_pred ccc
Confidence 743
No 100
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=5.2e-29 Score=190.85 Aligned_cols=266 Identities=13% Similarity=0.222 Sum_probs=224.6
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcC------C---
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLS------T--- 71 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~------~--- 71 (343)
+.+++.|.+-+||.+++ ..++..+.||.+.|++++|+ +.++++++.|++-.||... .
T Consensus 163 ~gtASADhTA~iWs~Es------------g~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a 230 (481)
T KOG0300|consen 163 CGTASADHTARIWSLES------------GACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNA 230 (481)
T ss_pred eeecccccceeEEeecc------------ccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCC
Confidence 46788999999999998 67888999999999999999 8899999999999999721 0
Q ss_pred ---------------------------C----eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc
Q 019326 72 ---------------------------S----SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120 (343)
Q Consensus 72 ---------------------------~----~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 120 (343)
+ -++..+.+| .+.|.+..|...+ +.+++++.|.+..+||++++
T Consensus 231 ~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH-~~vV~a~dWL~gg-----~Q~vTaSWDRTAnlwDVEtg 304 (481)
T KOG0300|consen 231 PSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGH-RAVVSACDWLAGG-----QQMVTASWDRTANLWDVETG 304 (481)
T ss_pred CCCCCchhhhhcccccccccccccccCCceeeeeeeeeecc-ccceEehhhhcCc-----ceeeeeeccccceeeeeccC
Confidence 0 134566788 8999999999888 89999999999999999999
Q ss_pred ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCce--eEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEE
Q 019326 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR--SFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQ 198 (343)
Q Consensus 121 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d 198 (343)
+.+..+.+|....+.++-+|..+++++.+.|.+.++||.+..-. .....+...+.+..|..+.+.+-...|.++++||
T Consensus 305 e~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWd 384 (481)
T KOG0300|consen 305 EVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWD 384 (481)
T ss_pred ceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEee
Confidence 99999999999999999999999999999999999999985432 2234456789999998877655555999999999
Q ss_pred cccce-eEEEecCCcceEEeeecCCC-eEEEEeCCCcEEEEECCCCceeEEec----ccccccEEEEEEEecCCCCCCCC
Q 019326 199 AEDAK-LLCELDGKKRILCAAPGENG-VLFTGGEDRSITAWDTNSGKVAYCIE----DAHSARVKGIVVLTKNDGGSTAE 272 (343)
Q Consensus 199 ~~~~~-~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~~~~~ 272 (343)
+++.+ ++.++....+++.++.+.+. .++.--++..|++||+. |..+..++ .+|...|.+.+|..+..-.
T Consensus 385 LrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDln-G~RlaRlPrtsRqgHrRMV~c~AW~eehp~c---- 459 (481)
T KOG0300|consen 385 LRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLN-GNRLARLPRTSRQGHRRMVTCCAWLEEHPAC---- 459 (481)
T ss_pred eccccCcceeeecCCccceeEeecCCceEEeccCCceEEEEecC-CCccccCCcccccccceeeeeeeccccCccc----
Confidence 99864 67888889999999998654 77788888999999997 44444333 4899999999999876533
Q ss_pred CCeEEEEEcCCCcEEEEeccCc
Q 019326 273 NPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 273 ~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
-|++++.|..+.-|++..+
T Consensus 460 ---nLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 460 ---NLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred ---ccccccccceeeeeEeccc
Confidence 6899999999999999865
No 101
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.97 E-value=7.2e-29 Score=208.72 Aligned_cols=277 Identities=20% Similarity=0.264 Sum_probs=222.9
Q ss_pred eEEeccCCeEEEEEeecCCCCC----------------CCCc----------ceeeEEeEEecCCCCCeEEEEec--Cce
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYS----------------SDQK----------TLTLTQLFSYPAHLSPITTVAVS--GTA 54 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~----------------~~~~----------~~~~~~~~~~~~h~~~v~~l~~~--~~~ 54 (343)
+++.+.|++||+|++....... .++. .+... ....-+....+.+++.+ +++
T Consensus 395 F~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka-~~s~~d~r~G~R~~~vSp~gqh 473 (1080)
T KOG1408|consen 395 FTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKA-LVSTCDSRFGFRALAVSPDGQH 473 (1080)
T ss_pred eeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCccccc-chhhcCcccceEEEEECCCcce
Confidence 6889999999999997622110 0000 00000 11111234568999998 899
Q ss_pred EEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC-CcceeeeeeeccccE
Q 019326 55 AASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD-PFVLLTSVKVHKKGV 133 (343)
Q Consensus 55 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~v 133 (343)
||+|..-|+++||++...+....+..| ...|.||.|+... ...++|++++.|..|.|||+. ...+++++.+|...|
T Consensus 474 LAsGDr~GnlrVy~Lq~l~~~~~~eAH-esEilcLeyS~p~--~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssI 550 (1080)
T KOG1408|consen 474 LASGDRGGNLRVYDLQELEYTCFMEAH-ESEILCLEYSFPV--LTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSI 550 (1080)
T ss_pred ecccCccCceEEEEehhhhhhhheecc-cceeEEEeecCch--hhhHhhhhccCCceEEEEecccccchhhhhcccccce
Confidence 999999999999999999999999999 9999999998543 223789999999999999994 556889999999999
Q ss_pred EEEEEecCC--CEEEEEeCCCeEEEEEccC---CceeEE---EEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEccccee
Q 019326 134 NDLAVHHSG--KLALTVGRDDCLAMVNLVR---GRRSFY---HKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKL 204 (343)
Q Consensus 134 ~~i~~~~~~--~~l~~~~~d~~i~~wd~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~ 204 (343)
+++.|.-+| ..+++++.|+.|.+--.+. +..... ......+..++..|..++++++ .|..|+||++++++.
T Consensus 551 TsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq 630 (1080)
T KOG1408|consen 551 TSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQ 630 (1080)
T ss_pred eEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccce
Confidence 999999887 7899999998876543332 111111 1112457789999999999999 999999999999999
Q ss_pred EEEec----CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEE
Q 019326 205 LCELD----GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVAS 279 (343)
Q Consensus 205 ~~~~~----~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s 279 (343)
.+.|+ +.+....+...+ +.|+++...|.++.++|..+++++.++. +|...|+++.|.++-. .|++
T Consensus 631 ~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~-GHsE~VTG~kF~nDCk---------HlIS 700 (1080)
T KOG1408|consen 631 VKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMT-GHSEAVTGVKFLNDCK---------HLIS 700 (1080)
T ss_pred eeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhc-Ccchheeeeeecccch---------hhee
Confidence 99998 556677777764 6799999999999999999999999999 9999999999999987 9999
Q ss_pred EcCCCcEEEEeccC
Q 019326 280 ASSDGVICVWDVRM 293 (343)
Q Consensus 280 ~~~dg~i~vwd~~~ 293 (343)
.+.||.|.||.+..
T Consensus 701 vsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 701 VSGDGCIFVWKLPL 714 (1080)
T ss_pred ecCCceEEEEECch
Confidence 99999999999864
No 102
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=2.2e-28 Score=214.64 Aligned_cols=285 Identities=18% Similarity=0.176 Sum_probs=228.6
Q ss_pred CCCCeEEEEec--CceEEEee--CCCeEEEEEcCC------------CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEE
Q 019326 41 HLSPITTVAVS--GTAAASGG--TDDTIHLYDLST------------SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLF 104 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~--~dg~i~iwd~~~------------~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~ 104 (343)
+...|.++..+ +..++||+ .||.++||+.+. .+.+.....| .+.|+|+.|+|++ ++||
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h-~~sv~CVR~S~dG-----~~lA 85 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDH-DGSVNCVRFSPDG-----SYLA 85 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccc-cCceeEEEECCCC-----CeEe
Confidence 34568888888 88999999 899999998752 2345566778 9999999999999 8999
Q ss_pred EeeCCCeEEEEECCC------------------cceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeE
Q 019326 105 STSADGFVSIFDADP------------------FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF 166 (343)
Q Consensus 105 s~~~dg~i~iwd~~~------------------~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 166 (343)
+|+.|+.|.||.... ++.+..+.+|...|..++|+|++.+|++++.|++|.+|+.++.+.+.
T Consensus 86 sGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~ 165 (942)
T KOG0973|consen 86 SGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLK 165 (942)
T ss_pred eccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeee
Confidence 999999999998762 34678889999999999999999999999999999999999997665
Q ss_pred EE-EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-------CCcceEEeeecC-CCeEEEEe----CCC
Q 019326 167 YH-KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-------GKKRILCAAPGE-NGVLFTGG----EDR 232 (343)
Q Consensus 167 ~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-------~~~~i~~~~~~~-~~~l~~~~----~dg 232 (343)
.. .+...|..+.|+|-|++|++- .|+.+++|++.+....+.+. ....+..+.|+| |.+|++.. .-.
T Consensus 166 vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~ 245 (942)
T KOG0973|consen 166 VLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKS 245 (942)
T ss_pred eeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcc
Confidence 54 456789999999999999999 99999999988876666655 234578889995 56777653 234
Q ss_pred cEEEEECCCCceeEEecccccccEEEEEEEecCCCC----CCCCCC----eEEEEEcCCCcEEEEeccCccccCCCcccc
Q 019326 233 SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGG----STAENP----YLVASASSDGVICVWDVRMAIKEKPLPLAE 304 (343)
Q Consensus 233 ~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~----~~~~~~----~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 304 (343)
++.|.+..+.+.-..+- +|..++.+++|+|.--.. -.+..+ ..+|+||.|++|.||..... +|..+..
T Consensus 246 ~~~IieR~tWk~~~~Lv-GH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~---RPl~vi~ 321 (942)
T KOG0973|consen 246 TIAIIERGTWKVDKDLV-GHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALP---RPLFVIH 321 (942)
T ss_pred eeEEEecCCceeeeeee-cCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCC---Cchhhhh
Confidence 68899988888888888 999999999999852110 001112 16889999999999999654 3333333
Q ss_pred cccccceeEEEcCCCCceeccccCCCCCCCc
Q 019326 305 AKTNSRLTCLAGSSTKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 305 ~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~ 335 (343)
--....|..|+|+|||..+.+.+-|+.+...
T Consensus 322 ~lf~~SI~DmsWspdG~~LfacS~DGtV~~i 352 (942)
T KOG0973|consen 322 NLFNKSIVDMSWSPDGFSLFACSLDGTVALI 352 (942)
T ss_pred hhhcCceeeeeEcCCCCeEEEEecCCeEEEE
Confidence 3345679999999999999999999865543
No 103
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.97 E-value=6.7e-29 Score=201.36 Aligned_cols=292 Identities=13% Similarity=0.153 Sum_probs=223.4
Q ss_pred eeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC----eeeeEeccCCCCCeEEEEEeCCCCCCCCceE
Q 019326 30 LTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS----SSLGAIHHHESSSVTSLAFYTPQNLSVPRNL 103 (343)
Q Consensus 30 ~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l 103 (343)
.+......+++|...|.++++. |..|++|+.|-.|++||+... +..+.+...+...|.++.|++.+ ..|
T Consensus 155 IP~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg-----~~i 229 (641)
T KOG0772|consen 155 IPGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTG-----DQI 229 (641)
T ss_pred CCccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCC-----CeE
Confidence 3445566788999999999998 999999999999999999753 33445554446789999999999 688
Q ss_pred EEeeCCCeEEEEECCCcceeee------------eeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCce-eEEEE
Q 019326 104 FSTSADGFVSIFDADPFVLLTS------------VKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRR-SFYHK 169 (343)
Q Consensus 104 ~s~~~dg~i~iwd~~~~~~~~~------------~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~-~~~~~ 169 (343)
++.+.....+|+|.+..+.+.. -++|...+++.+|+|.. ..+++++.||++++||+...+. ...+.
T Consensus 230 Lvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik 309 (641)
T KOG0772|consen 230 LVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIK 309 (641)
T ss_pred EEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEe
Confidence 8888888999999876554433 34788899999999975 6899999999999999986542 22222
Q ss_pred c------CCcceEEEEeCCCCEEEEE-eCCcEEEEEccccee--EEEec--CCc--ceEEeeec-CCCeEEEEeCCCcEE
Q 019326 170 I------GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKL--LCELD--GKK--RILCAAPG-ENGVLFTGGEDRSIT 235 (343)
Q Consensus 170 ~------~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~--~~~~~--~~~--~i~~~~~~-~~~~l~~~~~dg~i~ 235 (343)
. .-.+..++|+++++.++++ .||.|.+|+..+... ...+. |.. .|+|+.|+ ++++|++-+.|++++
T Consensus 310 ~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLK 389 (641)
T KOG0772|consen 310 TKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLK 389 (641)
T ss_pred eccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCcee
Confidence 2 2457889999999999999 999999999865332 22222 544 89999999 789999999999999
Q ss_pred EEECCCCc-eeEEecc-cccccEEEEEEEecCCCCCCCCCCeEEEEEcC------CCcEEEEeccCccccCCCccccccc
Q 019326 236 AWDTNSGK-VAYCIED-AHSARVKGIVVLTKNDGGSTAENPYLVASASS------DGVICVWDVRMAIKEKPLPLAEAKT 307 (343)
Q Consensus 236 i~d~~~~~-~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~~ 307 (343)
+||+++.+ ++..... ...-+-+.++|+|+.. +|++|.. -|++.+||..+-.....+.+.
T Consensus 390 vWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~k---------li~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~---- 456 (641)
T KOG0772|consen 390 VWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDK---------LILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS---- 456 (641)
T ss_pred eeeccccccchhhhcCCCccCCCCccccCCCce---------EEEecccccCCCCCceEEEEeccceeeEEEecCC----
Confidence 99998764 4443331 1234557788988887 8888864 478999999886544433333
Q ss_pred ccceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 308 NSRLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 308 ~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
...|..+.|+|--.-+..+.+++..+..-++.
T Consensus 457 ~aSvv~~~WhpkLNQi~~gsgdG~~~vyYdp~ 488 (641)
T KOG0772|consen 457 TASVVRCLWHPKLNQIFAGSGDGTAHVYYDPN 488 (641)
T ss_pred CceEEEEeecchhhheeeecCCCceEEEECcc
Confidence 44588889999888888899999877655443
No 104
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=1.2e-26 Score=169.83 Aligned_cols=277 Identities=16% Similarity=0.131 Sum_probs=215.7
Q ss_pred eEEeccCCeEEEEEeecCCCCCCC---CcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCee---
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSD---QKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSS--- 74 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~---~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~--- 74 (343)
.++|+..++.+|-........+.. .+..+......-+-|.+.|.|.+|+ |+++++|+.|.+|++.-.+...+
T Consensus 47 yavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~ 126 (350)
T KOG0641|consen 47 YAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNAT 126 (350)
T ss_pred EEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCCceEEEEeccccccccc
Confidence 467888888888665432111100 0111122233445689999999999 99999999999999976543321
Q ss_pred --eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-CCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC
Q 019326 75 --LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD 151 (343)
Q Consensus 75 --~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d 151 (343)
-.+|.-| .+.|..++|..+.. ..+..|++++. |..|++-|..+++..+.+.+|.+-|.++ ++-++-++++|+.|
T Consensus 127 g~dle~nmh-dgtirdl~fld~~~-s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqd 203 (350)
T KOG0641|consen 127 GHDLEFNMH-DGTIRDLAFLDDPE-SGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQD 203 (350)
T ss_pred Ccceeeeec-CCceeeeEEecCCC-cCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCC
Confidence 2356667 89999999986542 22356776654 7789999999999999999999998876 34467899999999
Q ss_pred CeEEEEEccCCceeEEEEcC--------CcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC
Q 019326 152 DCLAMVNLVRGRRSFYHKIG--------KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE 221 (343)
Q Consensus 152 ~~i~~wd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~ 221 (343)
.+|++||++-..++...... ..+..++..|.|++++++ .|....+||++.++.++.+. |...|.|+.|++
T Consensus 204 ktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp 283 (350)
T KOG0641|consen 204 KTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSP 283 (350)
T ss_pred ceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCC
Confidence 99999999988877655431 457889999999999999 99999999999999998886 889999999997
Q ss_pred C-CeEEEEeCCCcEEEEECCCC----ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 222 N-GVLFTGGEDRSITAWDTNSG----KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 222 ~-~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+ .++++|+.|..|++=|+.-. -++...- .|...+..+.|+|..- -+++.+.|.++.+|-++
T Consensus 284 ~a~yllt~syd~~ikltdlqgdla~el~~~vv~-ehkdk~i~~rwh~~d~---------sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 284 GAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVA-EHKDKAIQCRWHPQDF---------SFISSSADKTATLWALN 349 (350)
T ss_pred CceEEEEecccceEEEeecccchhhcCceEEEE-eccCceEEEEecCccc---------eeeeccCcceEEEeccC
Confidence 6 59999999999999998732 1233333 7999999999999886 79999999999999764
No 105
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=3.5e-28 Score=185.79 Aligned_cols=221 Identities=18% Similarity=0.193 Sum_probs=186.2
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec----CceEEEeeCCCeEEEEEcCCCeeeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS----GTAAASGGTDDTIHLYDLSTSSSLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~l~s~~~dg~i~iwd~~~~~~~~~ 77 (343)
-+|+|+.|-+|+|||+.. ..++..+-.|.+.|+++.|. .+.|++|+.||.|.+|+....+++..
T Consensus 55 ~~aSGssDetI~IYDm~k------------~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~s 122 (362)
T KOG0294|consen 55 YVASGSSDETIHIYDMRK------------RKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKS 122 (362)
T ss_pred eEeccCCCCcEEEEeccc------------hhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeee
Confidence 378999999999999987 45566667899999999998 23799999999999999999999999
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEE
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMV 157 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~w 157 (343)
+++| .+.|+.++.+|.+ ++.++.+.|+.++.||+-+++.-..++. ...-..+.|+|.|.+++.++.+ .|-+|
T Consensus 123 lK~H-~~~Vt~lsiHPS~-----KLALsVg~D~~lr~WNLV~Gr~a~v~~L-~~~at~v~w~~~Gd~F~v~~~~-~i~i~ 194 (362)
T KOG0294|consen 123 LKAH-KGQVTDLSIHPSG-----KLALSVGGDQVLRTWNLVRGRVAFVLNL-KNKATLVSWSPQGDHFVVSGRN-KIDIY 194 (362)
T ss_pred eccc-ccccceeEecCCC-----ceEEEEcCCceeeeehhhcCccceeecc-CCcceeeEEcCCCCEEEEEecc-EEEEE
Confidence 9999 8889999999999 7889999999999999988776555553 2233459999999999888876 58999
Q ss_pred EccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec-CCcceEEeeec---CCCeEEEEeCCCc
Q 019326 158 NLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD-GKKRILCAAPG---ENGVLFTGGEDRS 233 (343)
Q Consensus 158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~---~~~~l~~~~~dg~ 233 (343)
.+.+.........+..+.++.|...+..++.+.+..|.+||..+..+...+. |..+|..+.+. .+.+|++++.||.
T Consensus 195 q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~ 274 (362)
T KOG0294|consen 195 QLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGF 274 (362)
T ss_pred ecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCce
Confidence 9988777666666777788888765555555599999999999888877776 89999999865 2469999999999
Q ss_pred EEEEECCCC
Q 019326 234 ITAWDTNSG 242 (343)
Q Consensus 234 i~i~d~~~~ 242 (343)
|++||++..
T Consensus 275 I~vWd~~~~ 283 (362)
T KOG0294|consen 275 IKVWDIDME 283 (362)
T ss_pred EEEEEcccc
Confidence 999999865
No 106
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.97 E-value=4.5e-29 Score=201.90 Aligned_cols=264 Identities=16% Similarity=0.252 Sum_probs=224.9
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCee--eeEe
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSS--LGAI 78 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~--~~~~ 78 (343)
+.+|+. |.|+|||+.... .......+-.+ .....|.++... |+.|++|+.-.++.|||+..... ..++
T Consensus 434 VyTgGk-gcVKVWdis~pg------~k~PvsqLdcl-~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikael 505 (705)
T KOG0639|consen 434 VYTGGK-GCVKVWDISQPG------NKSPVSQLDCL-NRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAEL 505 (705)
T ss_pred eEecCC-CeEEEeeccCCC------CCCcccccccc-CcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhc
Confidence 345554 889999997632 22222222222 245678887776 89999999999999999986543 3334
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
... .-...+|+.+|+. +..+++..||.|.|||+.+...++.|++|.+.+.||..+++|..|.+|+-|++|+.||
T Consensus 506 tss-apaCyALa~spDa-----kvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWD 579 (705)
T KOG0639|consen 506 TSS-APACYALAISPDA-----KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWD 579 (705)
T ss_pred CCc-chhhhhhhcCCcc-----ceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehh
Confidence 443 4567889999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEE
Q 019326 159 LVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITA 236 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i 236 (343)
+++++.+....+..+|.++...|++.+++++ .++.+.+......+..+...|..-|.++.|. -++++++.+.|+.+..
T Consensus 580 lregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLna 659 (705)
T KOG0639|consen 580 LREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNA 659 (705)
T ss_pred hhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhh
Confidence 9999999999999999999999999999999 8999999888777666666699999999998 5889999999999999
Q ss_pred EECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 237 WDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 237 ~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
|...-|..+...+ ....|.+..++.++. +++|||.|....||.+
T Consensus 660 wrtPyGasiFqsk--E~SsVlsCDIS~ddk---------yIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 660 WRTPYGASIFQSK--ESSSVLSCDISFDDK---------YIVTGSGDKKATVYEV 703 (705)
T ss_pred ccCccccceeecc--ccCcceeeeeccCce---------EEEecCCCcceEEEEE
Confidence 9999999888877 778999999999887 9999999999888875
No 107
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=2.7e-29 Score=208.87 Aligned_cols=238 Identities=19% Similarity=0.274 Sum_probs=205.4
Q ss_pred CCCCeE---EEEec---CceEEEeeCCCeEEEEEcCCCe------eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC
Q 019326 41 HLSPIT---TVAVS---GTAAASGGTDDTIHLYDLSTSS------SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA 108 (343)
Q Consensus 41 h~~~v~---~l~~~---~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~ 108 (343)
|...|. .+..+ +++|+|||.||.|++|+..... .+..++.| ...|+.+....++ +.|++++.
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~H-sDWVNDiiL~~~~-----~tlIS~Ss 93 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHH-SDWVNDIILCGNG-----KTLISASS 93 (735)
T ss_pred ccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhh-HhHHhhHHhhcCC-----CceEEecC
Confidence 444455 34444 6789999999999999986532 36677888 9999999999888 79999999
Q ss_pred CCeEEEEECCCc--ceeeeeeeccccEEEEEE-ecCCCEEEEEeCCCeEEEEEccCCce--eE------EE----EcCCc
Q 019326 109 DGFVSIFDADPF--VLLTSVKVHKKGVNDLAV-HHSGKLALTVGRDDCLAMVNLVRGRR--SF------YH----KIGKE 173 (343)
Q Consensus 109 dg~i~iwd~~~~--~~~~~~~~~~~~v~~i~~-~~~~~~l~~~~~d~~i~~wd~~~~~~--~~------~~----~~~~~ 173 (343)
|-+|++|+.... -++.++..|...|.++++ .++...+++||.|+.|.+||+.++.. +. .. .....
T Consensus 94 DtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~s 173 (735)
T KOG0308|consen 94 DTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDS 173 (735)
T ss_pred CceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccc
Confidence 999999999765 588889999999999999 77888999999999999999997732 11 11 22356
Q ss_pred ceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecc
Q 019326 174 ASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIED 250 (343)
Q Consensus 174 ~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 250 (343)
+.+++.++.+..++.+ .++.+++||.++.+.+..+. |...|.++..+ ++..+++++.||+|++||+...+++.++.
T Consensus 174 iYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~- 252 (735)
T KOG0308|consen 174 IYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYI- 252 (735)
T ss_pred eeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEE-
Confidence 8889999999888888 89999999999999888887 88999999988 57899999999999999999999999999
Q ss_pred cccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 251 AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 251 ~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.|...|+++..++.-. .+++|+.||.|..=|+++.
T Consensus 253 vH~e~VWaL~~~~sf~---------~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 253 VHKEGVWALQSSPSFT---------HVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred eccCceEEEeeCCCcc---------eEEecCCCCcEEecccCCc
Confidence 9999999999998777 9999999999999999985
No 108
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=6.3e-28 Score=183.36 Aligned_cols=245 Identities=19% Similarity=0.267 Sum_probs=199.3
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
|++|+.||+||+|+++... . ..+ .....|.++|.+++|+ |..+++|+.|+.+++||+.++ .+..+..
T Consensus 43 ~~A~SWD~tVR~wevq~~g-------~--~~~-ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~ 111 (347)
T KOG0647|consen 43 LAAGSWDGTVRIWEVQNSG-------Q--LVP-KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-QVSQVAA 111 (347)
T ss_pred EEecccCCceEEEEEecCC-------c--ccc-hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-Ceeeeee
Confidence 6799999999999998721 1 122 3344699999999999 999999999999999999999 5567778
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
| .++|.++.|.+.... ..|++|+.|.+|+.||.+...++.++.. .+.+.++..-. .+++++..++.|.+|+++
T Consensus 112 H-d~pvkt~~wv~~~~~---~cl~TGSWDKTlKfWD~R~~~pv~t~~L-PeRvYa~Dv~~--pm~vVata~r~i~vynL~ 184 (347)
T KOG0647|consen 112 H-DAPVKTCHWVPGMNY---QCLVTGSWDKTLKFWDTRSSNPVATLQL-PERVYAADVLY--PMAVVATAERHIAVYNLE 184 (347)
T ss_pred c-ccceeEEEEecCCCc---ceeEecccccceeecccCCCCeeeeeec-cceeeehhccC--ceeEEEecCCcEEEEEcC
Confidence 8 999999999987721 4899999999999999999888888874 55677766543 488899999999999998
Q ss_pred CCcee---EEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeE--EEec-CC---------cceEEeeecC-CC
Q 019326 161 RGRRS---FYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLL--CELD-GK---------KRILCAAPGE-NG 223 (343)
Q Consensus 161 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~--~~~~-~~---------~~i~~~~~~~-~~ 223 (343)
.+... ....+.-.+.+++..++....+.+ -+|.+.+..+..+... ..++ |. ..|++++|++ -+
T Consensus 185 n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hg 264 (347)
T KOG0647|consen 185 NPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHG 264 (347)
T ss_pred CCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccc
Confidence 76532 233456778899999888888888 8999999988775332 2222 22 3578899986 46
Q ss_pred eEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCC
Q 019326 224 VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 224 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
.|++++.||+..+||-.....+.+.+ .|..+|++..|+.++.
T Consensus 265 tlvTaGsDGtf~FWDkdar~kLk~s~-~~~qpItcc~fn~~G~ 306 (347)
T KOG0647|consen 265 TLVTAGSDGTFSFWDKDARTKLKTSE-THPQPITCCSFNRNGS 306 (347)
T ss_pred eEEEecCCceEEEecchhhhhhhccC-cCCCccceeEecCCCC
Confidence 89999999999999999888888888 8999999999999887
No 109
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=6e-28 Score=193.18 Aligned_cols=273 Identities=18% Similarity=0.260 Sum_probs=219.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCC--CCC---cceeeEEeEEe-cCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYS--SDQ---KTLTLTQLFSY-PAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS 73 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~--~~~---~~~~~~~~~~~-~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~ 73 (343)
+.++++.+++|.=|++.+....+ .+. ......+...- ++|...|.+++.+ +.+|++|+.|..|.||+.++.+
T Consensus 156 ~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~e 235 (479)
T KOG0299|consen 156 RVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLE 235 (479)
T ss_pred ceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCCceEEEecCcccc
Confidence 46788999999999998744221 000 00011111111 3899999999998 9999999999999999999999
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCe
Q 019326 74 SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDC 153 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~ 153 (343)
.+..+.+| .+.|.+++|.... ..+++++.|++|++|+++....+.++.+|.+.|.+|....-++.+-+|+.|++
T Consensus 236 hv~~~~gh-r~~V~~L~fr~gt-----~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT 309 (479)
T KOG0299|consen 236 HVKVFKGH-RGAVSSLAFRKGT-----SELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRT 309 (479)
T ss_pred hhhccccc-ccceeeeeeecCc-----cceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccce
Confidence 99999999 9999999999777 78999999999999999999999999999999999999888888888889999
Q ss_pred EEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec--C-----------CcceEEeee
Q 019326 154 LAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD--G-----------KKRILCAAP 219 (343)
Q Consensus 154 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~--~-----------~~~i~~~~~ 219 (343)
+++|++....++........+.|++|-.+ ..|+++ .+|.|.+|++...+++.... | +..|++++.
T Consensus 310 ~rlwKi~eesqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~ 388 (479)
T KOG0299|consen 310 VRLWKIPEESQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAV 388 (479)
T ss_pred eEEEeccccceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEe
Confidence 99999977777777777788999999765 455566 99999999999988887665 2 125778887
Q ss_pred cC-CCeEEEEeCCCcEEEEECCCC----ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEE-cCCCcEEEEecc
Q 019326 220 GE-NGVLFTGGEDRSITAWDTNSG----KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASA-SSDGVICVWDVR 292 (343)
Q Consensus 220 ~~-~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~-~~dg~i~vwd~~ 292 (343)
.+ .+++++|+.+|.|++|-+..+ +++..+. -.+.|++|+|++++. .+++| +....+-=|-..
T Consensus 389 i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls--~~GfVNsl~f~~sgk---------~ivagiGkEhRlGRW~~~ 456 (479)
T KOG0299|consen 389 IPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS--LVGFVNSLAFSNSGK---------RIVAGIGKEHRLGRWWCL 456 (479)
T ss_pred cccCceEEecCCCCceEEEEecCCccccceeeecc--cccEEEEEEEccCCC---------EEEEecccccccceeeEe
Confidence 75 579999999999999998877 4566665 778999999999887 45544 555555455444
No 110
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1.4e-26 Score=193.67 Aligned_cols=275 Identities=17% Similarity=0.179 Sum_probs=229.4
Q ss_pred ecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe-eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 38 YPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS-SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 38 ~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
+.-...+|++|||+ .+.||.+-.+|.|.+|++..+= +...+.++++..|.+|+|++.+ .|++.+.+|.|.-
T Consensus 21 ~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~------RLFS~g~sg~i~E 94 (691)
T KOG2048|consen 21 VDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGG------RLFSSGLSGSITE 94 (691)
T ss_pred EeeeccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCC------eEEeecCCceEEE
Confidence 33457889999999 7889999999999999998763 4456677778999999999766 8999999999999
Q ss_pred EECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC---CcceEEEEeCCCCEEEEE-e
Q 019326 115 FDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG---KEASLIKFDGSGEKFFMV-T 190 (343)
Q Consensus 115 wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~ 190 (343)
||+.+.++...+....+.|++++.+|.+..++.|+.||.+..++...++......+. ..+.+++|+|++..++++ .
T Consensus 95 wDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~ 174 (691)
T KOG2048|consen 95 WDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSI 174 (691)
T ss_pred EecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEeccc
Confidence 999999999999988999999999999999999999998888888887766655443 668899999999999999 8
Q ss_pred CCcEEEEEcccceeEEEec---------CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEE
Q 019326 191 EEKVGIHQAEDAKLLCELD---------GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVV 261 (343)
Q Consensus 191 ~~~i~~~d~~~~~~~~~~~---------~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~ 261 (343)
||.|++||...+..+.... ...-|.++.+-..+.+++|...|+|.+||...+..++.+. .|...|.+|+.
T Consensus 175 Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~-~h~adVl~Lav 253 (691)
T KOG2048|consen 175 DGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHS-CHDADVLALAV 253 (691)
T ss_pred CceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhh-hhhcceeEEEE
Confidence 9999999999988776322 1223566666678899999999999999999999999999 99999999999
Q ss_pred EecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 262 LTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 262 ~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
.++++ ++++++.|+.|.-+...+...+-........+...|.+++..++ .++.+..|.
T Consensus 254 ~~~~d---------~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~ 311 (691)
T KOG2048|consen 254 ADNED---------RVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDF 311 (691)
T ss_pred cCCCC---------eEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceee
Confidence 99887 99999999999999988765432222223344456889998877 666666665
No 111
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=2.3e-27 Score=189.98 Aligned_cols=282 Identities=13% Similarity=0.180 Sum_probs=234.2
Q ss_pred CCCeEEEEec--CceEEEeeCCCeEEEEEcCC--CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC
Q 019326 42 LSPITTVAVS--GTAAASGGTDDTIHLYDLST--SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA 117 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 117 (343)
.+.|+++.|+ ...|++++.|+.+++|.++. ...++.+.-. ..+|.+.+|.|+|. ..+++++.-..++.||+
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~-~fPi~~a~f~p~G~----~~i~~s~rrky~ysyDl 287 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLE-KFPIQKAEFAPNGH----SVIFTSGRRKYLYSYDL 287 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeec-cCccceeeecCCCc----eEEEecccceEEEEeec
Confidence 4789999999 67899999999999998863 3456666666 78999999999993 48999999999999999
Q ss_pred CCccee--eeeeecc-ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCc
Q 019326 118 DPFVLL--TSVKVHK-KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEK 193 (343)
Q Consensus 118 ~~~~~~--~~~~~~~-~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 193 (343)
.+.+.. ....++. ..+.....+|++++|+..+..|.|.+....+++.+..+...+.+..++|+.+++.++++ .+|.
T Consensus 288 e~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~Ge 367 (514)
T KOG2055|consen 288 ETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGE 367 (514)
T ss_pred cccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCce
Confidence 876533 2233333 36777888999999999999999999999999999999999999999999999988888 9999
Q ss_pred EEEEEcccceeEEEecCCcce--EEeeec-CCCeEEEEeCCCcEEEEECCC------CceeEEecccccccEEEEEEEec
Q 019326 194 VGIHQAEDAKLLCELDGKKRI--LCAAPG-ENGVLFTGGEDRSITAWDTNS------GKVAYCIEDAHSARVKGIVVLTK 264 (343)
Q Consensus 194 i~~~d~~~~~~~~~~~~~~~i--~~~~~~-~~~~l~~~~~dg~i~i~d~~~------~~~~~~~~~~h~~~v~~~~~~~~ 264 (343)
|.+||++...+++.+...+.+ ++++.+ ++.+|++|+..|.|.|||..+ .+++..+. .-...|++|.|+++
T Consensus 368 V~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~d-NLtt~Itsl~Fn~d 446 (514)
T KOG2055|consen 368 VYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVD-NLTTAITSLQFNHD 446 (514)
T ss_pred EEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhh-hhheeeeeeeeCcc
Confidence 999999999999998855554 455555 678999999999999999653 46777777 67789999999999
Q ss_pred CCCCCCCCCCeEEEEEc--CCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 265 NDGGSTAENPYLVASAS--SDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 265 ~~~~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
.+ +||.+| .+..+|+-.+.+.....-.|... ..-+.|+||+|||.+.|++.|..++++..++.+.
T Consensus 447 ~q---------iLAiaS~~~knalrLVHvPS~TVFsNfP~~n-~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~h 513 (514)
T KOG2055|consen 447 AQ---------ILAIASRVKKNALRLVHVPSCTVFSNFPTSN-TKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLHH 513 (514)
T ss_pred hh---------hhhhhhhccccceEEEeccceeeeccCCCCC-CcccceEEEEecCCCceEEeecCCCceeeEeecc
Confidence 87 777665 46789999998876555555442 2334699999999999999999999998877653
No 112
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.4e-27 Score=176.24 Aligned_cols=232 Identities=19% Similarity=0.216 Sum_probs=180.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec----CceEEEeeCCCeEEEEEcCCCee--e
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS----GTAAASGGTDDTIHLYDLSTSSS--L 75 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~l~s~~~dg~i~iwd~~~~~~--~ 75 (343)
||+++++|++|+||.++... ..+++.++.||.+||..++|. |++||+++.||.|.||.-.+++- .
T Consensus 25 rlATcsSD~tVkIf~v~~n~---------~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~ 95 (299)
T KOG1332|consen 25 RLATCSSDGTVKIFEVRNNG---------QSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKA 95 (299)
T ss_pred eeeeecCCccEEEEEEcCCC---------CceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhh
Confidence 79999999999999998731 247788999999999999997 89999999999999999988743 3
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc---ceeeeeeeccccEEEEEEecC---C-------
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF---VLLTSVKVHKKGVNDLAVHHS---G------- 142 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~i~~~~~---~------- 142 (343)
.....| ...|++++|.|.+. +-.|+.++.||.|.|.+.+.. ........|.-.|++++|.|. |
T Consensus 96 ~e~~~h-~~SVNsV~waphey---gl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~ 171 (299)
T KOG1332|consen 96 YEHAAH-SASVNSVAWAPHEY---GLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGP 171 (299)
T ss_pred hhhhhh-cccceeeccccccc---ceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCc
Confidence 455678 99999999999873 468999999999999988653 233445679999999999985 3
Q ss_pred ----CEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec-CCcceEEe
Q 019326 143 ----KLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD-GKKRILCA 217 (343)
Q Consensus 143 ----~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~i~~~ 217 (343)
+.|++|+.|+.|++|+...++-.... .+. |..-|+.+
T Consensus 172 ~~~~krlvSgGcDn~VkiW~~~~~~w~~e~--------------------------------------~l~~H~dwVRDV 213 (299)
T KOG1332|consen 172 AAKVKRLVSGGCDNLVKIWKFDSDSWKLER--------------------------------------TLEGHKDWVRDV 213 (299)
T ss_pred ccccceeeccCCccceeeeecCCcchhhhh--------------------------------------hhhhcchhhhhh
Confidence 56999999999999998775321111 111 44444455
Q ss_pred eec-----CCCeEEEEeCCCcEEEEECCCCc--eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 218 APG-----ENGVLFTGGEDRSITAWDTNSGK--VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 218 ~~~-----~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
+|. +...+++++.||++.||..+... -..++.......+..+.|+..+. +|+.++.|+.|.+|.
T Consensus 214 AwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn---------~LaVs~GdNkvtlwk 284 (299)
T KOG1332|consen 214 AWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGN---------ILAVSGGDNKVTLWK 284 (299)
T ss_pred hhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEecccc---------EEEEecCCcEEEEEE
Confidence 544 34589999999999999876321 11222214557899999999988 999999999999997
Q ss_pred ccC
Q 019326 291 VRM 293 (343)
Q Consensus 291 ~~~ 293 (343)
-+.
T Consensus 285 e~~ 287 (299)
T KOG1332|consen 285 ENV 287 (299)
T ss_pred eCC
Confidence 664
No 113
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1.1e-27 Score=192.01 Aligned_cols=238 Identities=18% Similarity=0.253 Sum_probs=200.9
Q ss_pred CCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC
Q 019326 41 HLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD 118 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 118 (343)
-.++|.|++-+ |.+|+.|+..|.|++|.+.+|+.+..+..| -..|+|+.|+.++ .+|++|+.||.|.+|.+.
T Consensus 80 ~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aH-YQ~ITcL~fs~dg-----s~iiTgskDg~V~vW~l~ 153 (476)
T KOG0646|consen 80 LPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAH-YQSITCLKFSDDG-----SHIITGSKDGAVLVWLLT 153 (476)
T ss_pred cccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhh-ccceeEEEEeCCC-----cEEEecCCCccEEEEEEE
Confidence 46789999987 888888889999999999999999999999 8999999999999 899999999999999862
Q ss_pred ---------CcceeeeeeeccccEEEEEEecCC--CEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEE
Q 019326 119 ---------PFVLLTSVKVHKKGVNDLAVHHSG--KLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 119 ---------~~~~~~~~~~~~~~v~~i~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
+-++...+..|.-+|+++...+.+ .++++++.|.++++||+..+..+.....+..+.+++++|.+..++
T Consensus 154 ~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~y 233 (476)
T KOG0646|consen 154 DLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVY 233 (476)
T ss_pred eecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEE
Confidence 346788899999999999988764 689999999999999999999999999999999999999999999
Q ss_pred EE-eCCcEEEEEcccce----------------eEEEec-CCc--ceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeE
Q 019326 188 MV-TEEKVGIHQAEDAK----------------LLCELD-GKK--RILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAY 246 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~~~----------------~~~~~~-~~~--~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~ 246 (343)
++ .+|.|.+.++.... .+..+. |.. +|+|++.+ ++.+|++|+.||.+.|||+.+.++++
T Consensus 234 iGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iR 313 (476)
T KOG0646|consen 234 IGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIR 313 (476)
T ss_pred ecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHH
Confidence 99 99999988775432 112222 444 89999998 88999999999999999999999999
Q ss_pred EecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 247 CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 247 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
++. ...++|+.+.+.|-... .+..-.....+..|++..
T Consensus 314 tl~-~~kgpVtnL~i~~~~~~--------~~l~~~~~ps~~~~~lkr 351 (476)
T KOG0646|consen 314 TLQ-TSKGPVTNLQINPLERG--------IILFEHKQPSLPNPHLKR 351 (476)
T ss_pred HHh-hhccccceeEeeccccc--------eecccccCccCCchHhhc
Confidence 887 57789999999766441 233333344555666554
No 114
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.96 E-value=4.7e-28 Score=196.05 Aligned_cols=281 Identities=17% Similarity=0.206 Sum_probs=232.6
Q ss_pred EeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC---eeeeEeccC-CCCCeEEEEEeCCCCCCCCceEEEee
Q 019326 34 QLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS---SSLGAIHHH-ESSSVTSLAFYTPQNLSVPRNLFSTS 107 (343)
Q Consensus 34 ~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~-~~~~v~~l~~~~~~~~~~~~~l~s~~ 107 (343)
++.++ .|..-|.+++++ ...++||+. |.|+|||+... ..+..+... ....|.++...|++ +.|++|+
T Consensus 412 q~~tL-~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdg-----rtLivGG 484 (705)
T KOG0639|consen 412 QINTL-AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDG-----RTLIVGG 484 (705)
T ss_pred hhhhh-ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCC-----ceEEecc
Confidence 34444 588888888888 678999886 67999999753 233333322 15789999999999 8999999
Q ss_pred CCCeEEEEECCCcce--eeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCC
Q 019326 108 ADGFVSIFDADPFVL--LTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGE 184 (343)
Q Consensus 108 ~dg~i~iwd~~~~~~--~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~ 184 (343)
+-.++.|||+....+ ..++.........++.+||.+..+++..||.|.|||+.+...+..+. +...+.|+.++++|.
T Consensus 485 eastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGt 564 (705)
T KOG0639|consen 485 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGT 564 (705)
T ss_pred ccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCc
Confidence 999999999965433 33343334467889999999999999999999999999888776554 557899999999999
Q ss_pred EEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEE
Q 019326 185 KFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVL 262 (343)
Q Consensus 185 ~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~ 262 (343)
.+.++ -|+.++.||++.++.+.+......|.++..++ +.+++.|-.++.+.+......+. ..+. -|..-|.++.|.
T Consensus 565 klWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~k-yqlh-lheScVLSlKFa 642 (705)
T KOG0639|consen 565 KLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEK-YQLH-LHESCVLSLKFA 642 (705)
T ss_pred eeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccc-eeec-ccccEEEEEEec
Confidence 99999 89999999999999999988889999999884 67999999999999998775543 4454 699999999999
Q ss_pred ecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 263 TKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 263 ~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
+.+. ++++.+.|..+..|....+. .+.+....+.|.|.++|.|.+|++.|+++++.-+++.
T Consensus 643 ~cGk---------wfvStGkDnlLnawrtPyGa-----siFqskE~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 643 YCGK---------WFVSTGKDNLLNAWRTPYGA-----SIFQSKESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred ccCc---------eeeecCchhhhhhccCcccc-----ceeeccccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 9988 99999999999999998875 4555666778999999999999999999988766554
No 115
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.96 E-value=2.4e-27 Score=198.63 Aligned_cols=276 Identities=16% Similarity=0.195 Sum_probs=220.4
Q ss_pred eEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeee--EeccCCCCCeEE-EEEeCCCCCCCCceEEEee
Q 019326 32 LTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLG--AIHHHESSSVTS-LAFYTPQNLSVPRNLFSTS 107 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~v~~-l~~~~~~~~~~~~~l~s~~ 107 (343)
++..+.+.||...|..+++. +..+++++.||++++|+-...+.+. .+.+| .+-|.. +++.+.. .-.+++|+
T Consensus 4 Y~ls~~l~gH~~DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~-~g~i~~~i~y~e~~----~~~l~~g~ 78 (745)
T KOG0301|consen 4 YKLSHELEGHKSDVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGP-KGFIANSICYAESD----KGRLVVGG 78 (745)
T ss_pred ceeEEEeccCccchheeEecCCeEEeecCCCCceeeeeccCcccccceecccC-cceeeccceecccc----CcceEeec
Confidence 45567788999999999988 7789999999999999987655443 45666 566666 7777533 14699999
Q ss_pred CCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEE
Q 019326 108 ADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 108 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
.|.+|.+|...+..+...+++|+..|.+++...++. +++|+.|.++++|....-... ...+...|..+..-|++ .++
T Consensus 79 ~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~l~~~-l~gH~asVWAv~~l~e~-~~v 155 (745)
T KOG0301|consen 79 MDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGELVYS-LQGHTASVWAVASLPEN-TYV 155 (745)
T ss_pred ccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecchhhhcc-cCCcchheeeeeecCCC-cEE
Confidence 999999999999999999999999999999888876 999999999999987543322 45566788899999988 555
Q ss_pred EE-eCCcEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecC
Q 019326 188 MV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKN 265 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~ 265 (343)
++ .|..|++|.- ++.++++. |...|..+++-++..+++++.||.|++|++ +|+.+.++. +|...|.++....++
T Consensus 156 TgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~-ghtn~vYsis~~~~~ 231 (745)
T KOG0301|consen 156 TGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMH-GHTNFVYSISMALSD 231 (745)
T ss_pred eccCcceeeeccC--CchhhhhccchhheeeeEEecCCCeEeecCCceEEEEec-cCceeeeee-ccceEEEEEEecCCC
Confidence 55 9999999976 77778877 888999999999989999999999999999 689999999 999999999966666
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCc
Q 019326 266 DGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 266 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~ 335 (343)
. .++|+++|++++||+.... .+.+.+ ....|.+..+-+++... .+..|+.++.+
T Consensus 232 ~---------~Ivs~gEDrtlriW~~~e~--~q~I~l----PttsiWsa~~L~NgDIv-vg~SDG~VrVf 285 (745)
T KOG0301|consen 232 G---------LIVSTGEDRTLRIWKKDEC--VQVITL----PTTSIWSAKVLLNGDIV-VGGSDGRVRVF 285 (745)
T ss_pred C---------eEEEecCCceEEEeecCce--EEEEec----CccceEEEEEeeCCCEE-EeccCceEEEE
Confidence 5 9999999999999999832 222211 12247777666655543 45556655443
No 116
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.96 E-value=1.6e-25 Score=181.45 Aligned_cols=297 Identities=17% Similarity=0.167 Sum_probs=239.5
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccC
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHH 81 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 81 (343)
|++.+..+.+..|+.+. +...+.+-++.-+ .+..|.|++|. +.-++||..+|.|.||+..+.+..+....|
T Consensus 215 liit~Gk~H~~Fw~~~~-------~~l~k~~~~fek~-ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH 286 (626)
T KOG2106|consen 215 LIITCGKGHLYFWTLRG-------GSLVKRQGIFEKR-EKKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAH 286 (626)
T ss_pred EEEEeCCceEEEEEccC-------CceEEEeeccccc-cceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeec
Confidence 56666779999998876 3333333333322 23779999999 788999999999999999988888877788
Q ss_pred CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee--eeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 82 ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV--KVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 82 ~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
.+.|.+|+...++ .|++|+.|..|..|| ...+.++.. ....++|..++=...+ |+.|...+.|..=.+
T Consensus 287 -~ggv~~L~~lr~G------tllSGgKDRki~~Wd-~~y~k~r~~elPe~~G~iRtv~e~~~d--i~vGTtrN~iL~Gt~ 356 (626)
T KOG2106|consen 287 -DGGVFSLCMLRDG------TLLSGGKDRKIILWD-DNYRKLRETELPEQFGPIRTVAEGKGD--ILVGTTRNFILQGTL 356 (626)
T ss_pred -CCceEEEEEecCc------cEeecCccceEEecc-ccccccccccCchhcCCeeEEecCCCc--EEEeeccceEEEeee
Confidence 9999999999998 788899999999999 433444433 3345678877654433 888888888888888
Q ss_pred cCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEE
Q 019326 160 VRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWD 238 (343)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d 238 (343)
+.+-.+..+.+......++.+|+.++++++ .|+.+++|+ ..++........+..|+.|++.+.++.|+..|...+.|
T Consensus 357 ~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d 434 (626)
T KOG2106|consen 357 ENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDPAECADFHPSGVVAVGTATGRWFVLD 434 (626)
T ss_pred cCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCceeEeeccCcceEEEeeccceEEEEe
Confidence 888888888888899999999999999999 999999999 67777777788899999999877999999999999999
Q ss_pred CCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCC
Q 019326 239 TNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSS 318 (343)
Q Consensus 239 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 318 (343)
.++...+..-. . ..+++.++|+|++. +||.|+.|+.|+||.+...... ..........+|+.++||+
T Consensus 435 ~e~~~lv~~~~-d-~~~ls~v~ysp~G~---------~lAvgs~d~~iyiy~Vs~~g~~--y~r~~k~~gs~ithLDwS~ 501 (626)
T KOG2106|consen 435 TETQDLVTIHT-D-NEQLSVVRYSPDGA---------FLAVGSHDNHIYIYRVSANGRK--YSRVGKCSGSPITHLDWSS 501 (626)
T ss_pred cccceeEEEEe-c-CCceEEEEEcCCCC---------EEEEecCCCeEEEEEECCCCcE--EEEeeeecCceeEEeeecC
Confidence 99865555544 4 89999999999998 9999999999999999875321 1222233348899999999
Q ss_pred CCceeccccCCCCC
Q 019326 319 TKSFKRPQIGDSAP 332 (343)
Q Consensus 319 ~~~~~~~~~~~~~~ 332 (343)
|++|+...+.|-.+
T Consensus 502 Ds~~~~~~S~d~ei 515 (626)
T KOG2106|consen 502 DSQFLVSNSGDYEI 515 (626)
T ss_pred CCceEEeccCceEE
Confidence 99999988877543
No 117
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=2.9e-28 Score=206.48 Aligned_cols=231 Identities=19% Similarity=0.194 Sum_probs=189.1
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
|++++..|.|.+||+... ...+.+..|..|...|+++.|+ .++|++|+.||.|++||++..+....+.
T Consensus 103 IAT~s~nG~i~vWdlnk~---------~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~ 173 (839)
T KOG0269|consen 103 IATCSTNGVISVWDLNKS---------IRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFR 173 (839)
T ss_pred heeecCCCcEEEEecCcc---------ccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccccccc
Confidence 789999999999999762 2245566788999999999999 8999999999999999999999888998
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC-cceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP-FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
+. ...|..+.|+|.. +..|+++...|.+++||++. .++...+..|.++|.++.|+|++.+|++||.|++|+|||
T Consensus 174 ~n-SESiRDV~fsp~~----~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd 248 (839)
T KOG0269|consen 174 SN-SESIRDVKFSPGY----GNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWD 248 (839)
T ss_pred cc-chhhhceeeccCC----CceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEe
Confidence 88 8999999999987 48999999999999999965 457788899999999999999999999999999999999
Q ss_pred ccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeecCC--CeEEEEeC--CCcE
Q 019326 159 LVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGEN--GVLFTGGE--DRSI 234 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~--~~l~~~~~--dg~i 234 (343)
..+++.- ...++....++.++.|-|. ..|++++. |-.|
T Consensus 249 ~t~~~~~--------------------------------------~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV 290 (839)
T KOG0269|consen 249 MTDSRAK--------------------------------------PKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSV 290 (839)
T ss_pred ccCCCcc--------------------------------------ceeEEeecceeeeeeeccCccchhhhhhccccceE
Confidence 9765532 2222233344555555432 36666653 7789
Q ss_pred EEEECCCCce-eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 235 TAWDTNSGKV-AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 235 ~i~d~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
+|||++..-. ..++. .|...++.++|..... ..+.+++.||+|..-.+++.
T Consensus 291 ~VWDvrRPYIP~~t~~-eH~~~vt~i~W~~~d~--------~~l~s~sKD~tv~qh~~kna 342 (839)
T KOG0269|consen 291 HVWDVRRPYIPYATFL-EHTDSVTGIAWDSGDR--------INLWSCSKDGTVLQHLFKNA 342 (839)
T ss_pred EEEeeccccccceeee-ccCccccceeccCCCc--------eeeEeecCccHHHHhhhhcc
Confidence 9999987654 45555 8999999999987433 28999999999988777765
No 118
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1.2e-26 Score=186.07 Aligned_cols=275 Identities=15% Similarity=0.202 Sum_probs=208.4
Q ss_pred CeEEEEEeecCCCCCCCCcceeeEEeEEecCC-CCCeEEEE-ecCceEEEeeC-CCeEEEEEcCCCeeeeEeccCCCCCe
Q 019326 10 KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAH-LSPITTVA-VSGTAAASGGT-DDTIHLYDLSTSSSLGAIHHHESSSV 86 (343)
Q Consensus 10 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~-~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~v 86 (343)
..+.+||++++ ....++++. ...-.++. ..+.+++++.. -..|.+|.+..........-- .++|
T Consensus 18 ~~~~~~dl~TG------------t~~~~ykg~~~a~~~sl~~l~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~-Pg~v 84 (476)
T KOG0646|consen 18 INCIVWDLRTG------------TSLLQYKGSYLAQAASLTALNNEYLLSAQLKRPLLHVWEILKKDQVVQYIVL-PGPV 84 (476)
T ss_pred cceeEEecCCC------------ceeEEecCcccccchhhhhhchhheeeecccCccccccccCchhhhhhhccc-ccce
Confidence 45899999982 334444443 11112222 22566666654 457899998866555422223 5889
Q ss_pred EEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCC----
Q 019326 87 TSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG---- 162 (343)
Q Consensus 87 ~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~---- 162 (343)
.+++-+|.+ .+|+.|+..|.|++|.+.+|.++..+..|-..|+++.|+.|+.+|++|+.||.|.+|.+..-
T Consensus 85 ~al~s~n~G-----~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~ 159 (476)
T KOG0646|consen 85 HALASSNLG-----YFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSAD 159 (476)
T ss_pred eeeecCCCc-----eEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccc
Confidence 999999999 67888889999999999999999999999999999999999999999999999999987432
Q ss_pred ---c--eeEEE-EcCCcceEEEEeCC--CCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEeCCC
Q 019326 163 ---R--RSFYH-KIGKEASLIKFDGS--GEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGGEDR 232 (343)
Q Consensus 163 ---~--~~~~~-~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg 232 (343)
. +...+ .+.-+|..+...+. ..+++++ .|..+++||+..+.++.++..+..+.+++.++ +..+++|+.+|
T Consensus 160 ~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G 239 (476)
T KOG0646|consen 160 NDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEG 239 (476)
T ss_pred cCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcc
Confidence 1 11111 22345666665554 4577777 99999999999999999999999999999986 57999999999
Q ss_pred cEEEEECCCC----------------ceeEEecccccc--cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 233 SITAWDTNSG----------------KVAYCIEDAHSA--RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 233 ~i~i~d~~~~----------------~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.|.+.++.+. ..+..+. +|.. .|++++++-++. +|++|+.||.++|||+.+.
T Consensus 240 ~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~-Gh~~~~~ITcLais~Dgt---------lLlSGd~dg~VcvWdi~S~ 309 (476)
T KOG0646|consen 240 KIFQNLLFKLSGQSAGVNQKGRHEENTQINVLV-GHENESAITCLAISTDGT---------LLLSGDEDGKVCVWDIYSK 309 (476)
T ss_pred eEEeeehhcCCcccccccccccccccceeeeec-cccCCcceeEEEEecCcc---------EEEeeCCCCCEEEEecchH
Confidence 9999887532 2344555 8887 999999999988 9999999999999999986
Q ss_pred cccCCCcccccccccceeEEEc
Q 019326 295 IKEKPLPLAEAKTNSRLTCLAG 316 (343)
Q Consensus 295 ~~~~~~~~~~~~~~~~i~~~~~ 316 (343)
+..+... ...++|+.+.+
T Consensus 310 Q~iRtl~----~~kgpVtnL~i 327 (476)
T KOG0646|consen 310 QCIRTLQ----TSKGPVTNLQI 327 (476)
T ss_pred HHHHHHh----hhccccceeEe
Confidence 5333221 14456666666
No 119
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.96 E-value=4.5e-27 Score=195.35 Aligned_cols=275 Identities=19% Similarity=0.230 Sum_probs=205.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeE--
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGA-- 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~-- 77 (343)
.|+.+..||.|.++|..... ...+...+.....|...|..+.|. ...|++++.|.++++||+++.++...
T Consensus 66 iLavadE~G~i~l~dt~~~~------fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~ 139 (720)
T KOG0321|consen 66 ILAVADEDGGIILFDTKSIV------FRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRL 139 (720)
T ss_pred eEEEecCCCceeeecchhhh------cchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeeccee
Confidence 37889999999999987521 011223345566899999999999 56799999999999999999988877
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc---------------------------eeeeeeecc
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV---------------------------LLTSVKVHK 130 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---------------------------~~~~~~~~~ 130 (343)
+.+| ...|.+++|.+.+ +..|++|+.||.|.|||++-.. .+...+.+.
T Consensus 140 ~~GH-~~SvkS~cf~~~n----~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s 214 (720)
T KOG0321|consen 140 NLGH-TGSVKSECFMPTN----PAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAAS 214 (720)
T ss_pred eccc-ccccchhhhccCC----CcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccccc
Confidence 8899 9999999999998 5899999999999999984211 111222344
Q ss_pred ccEEE---EEEecCCCEEEEEeC-CCeEEEEEccCCceeEEEEc------------CCcceEEEEeCCCCEEEEE-eCCc
Q 019326 131 KGVND---LAVHHSGKLALTVGR-DDCLAMVNLVRGRRSFYHKI------------GKEASLIKFDGSGEKFFMV-TEEK 193 (343)
Q Consensus 131 ~~v~~---i~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~-~~~~ 193 (343)
..|.+ +.+..|...|++++. |+.|++||+++........- ...+.++..+..|.++++. .|+.
T Consensus 215 ~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~s 294 (720)
T KOG0321|consen 215 NTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNS 294 (720)
T ss_pred CceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCc
Confidence 44444 455567778998888 99999999998764432221 1235567777778887777 9999
Q ss_pred EEEEEccccee--EEEecCC----cceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCC
Q 019326 194 VGIHQAEDAKL--LCELDGK----KRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDG 267 (343)
Q Consensus 194 i~~~d~~~~~~--~~~~~~~----~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 267 (343)
|+.|++..-.. +..+.+. ..+.++..-++.++++|+.|...++|.+.+.+.--.+..+|...|++++|.|....
T Consensus 295 Iy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t 374 (720)
T KOG0321|consen 295 IYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATT 374 (720)
T ss_pred EEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCC
Confidence 99999986443 2333221 12222222267899999999999999998876544444499999999999998654
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 268 GSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 268 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
-+++++.|-++++|++..+.
T Consensus 375 --------~v~TcSdD~~~kiW~l~~~l 394 (720)
T KOG0321|consen 375 --------PVATCSDDFRVKIWRLSNGL 394 (720)
T ss_pred --------CceeeccCcceEEEeccCch
Confidence 47888999999999997763
No 120
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.2e-27 Score=176.70 Aligned_cols=262 Identities=18% Similarity=0.211 Sum_probs=195.8
Q ss_pred cCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC---eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEE
Q 019326 39 PAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS---SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVS 113 (343)
Q Consensus 39 ~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 113 (343)
..|.+.|..+..+ |.+|||++.|++|+|+...++ +++.++.+| .++|..++|.... .+.+|++++.||.|.
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh-~GPVwqv~wahPk---~G~iLAScsYDgkVI 83 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGH-SGPVWKVAWAHPK---FGTILASCSYDGKVI 83 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCC-CCCeeEEeecccc---cCcEeeEeecCceEE
Confidence 3688888887766 999999999999999999865 567889999 9999999998622 138999999999999
Q ss_pred EEECCCcc--eeeeeeeccccEEEEEEecC--CCEEEEEeCCCeEEEEEccCC-c---eeEEEEcCCcceEEEEeCCCCE
Q 019326 114 IFDADPFV--LLTSVKVHKKGVNDLAVHHS--GKLALTVGRDDCLAMVNLVRG-R---RSFYHKIGKEASLIKFDGSGEK 185 (343)
Q Consensus 114 iwd~~~~~--~~~~~~~~~~~v~~i~~~~~--~~~l~~~~~d~~i~~wd~~~~-~---~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
||.-.+++ ....+..|...|++++|.|. |-.|++++.||.|.+.+.+.. . ......+...+++++|.|...
T Consensus 84 iWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~- 162 (299)
T KOG1332|consen 84 IWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASA- 162 (299)
T ss_pred EEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCC-
Confidence 99987764 45566789999999999986 478999999999999998765 1 112233445567777776411
Q ss_pred EEEEeCCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCc--eeEEecccccccEEEEEEE
Q 019326 186 FFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGK--VAYCIEDAHSARVKGIVVL 262 (343)
Q Consensus 186 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~h~~~v~~~~~~ 262 (343)
+++...-... +-..|++|+.|..|+||+..+++ ...++. +|.+.|+.++|.
T Consensus 163 -------------------------~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~-~H~dwVRDVAwa 216 (299)
T KOG1332|consen 163 -------------------------PGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLE-GHKDWVRDVAWA 216 (299)
T ss_pred -------------------------CccccccCcccccceeeccCCccceeeeecCCcchhhhhhhh-hcchhhhhhhhc
Confidence 0000000000 12579999999999999998763 334467 999999999999
Q ss_pred ecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 263 TKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 263 ~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
|.... ...+|+++|.||++.||..+.........+. ......+..+.||..|.+++.+.++++...+.+
T Consensus 217 P~~gl-----~~s~iAS~SqDg~viIwt~~~e~e~wk~tll-~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke 285 (299)
T KOG1332|consen 217 PSVGL-----PKSTIASCSQDGTVIIWTKDEEYEPWKKTLL-EEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKE 285 (299)
T ss_pred cccCC-----CceeeEEecCCCcEEEEEecCccCccccccc-ccCCcceEEEEEeccccEEEEecCCcEEEEEEe
Confidence 97531 1228999999999999988743222211221 124567999999999999999999997765544
No 121
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1.8e-24 Score=158.48 Aligned_cols=285 Identities=15% Similarity=0.142 Sum_probs=212.5
Q ss_pred eeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcC------CC--------eeeeEeccCCCCCeEEEEEeCC
Q 019326 31 TLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLS------TS--------SSLGAIHHHESSSVTSLAFYTP 94 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~------~~--------~~~~~~~~~~~~~v~~l~~~~~ 94 (343)
.+..+..+. ....|.+++|+ |.+.++|+...+++|-... .+ ..+..-..||.+.|.|.+|+|.
T Consensus 22 ~f~~i~~l~-dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~ 100 (350)
T KOG0641|consen 22 HFEAINILE-DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPC 100 (350)
T ss_pred ceEEEEEec-chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCc
Confidence 344454443 57789999999 8899999999998886432 11 1112223455999999999999
Q ss_pred CCCCCCceEEEeeCCCeEEEEECCCcc-----eeeeeeeccccEEEEEEecC----CCEEEEEeC-CCeEEEEEccCCce
Q 019326 95 QNLSVPRNLFSTSADGFVSIFDADPFV-----LLTSVKVHKKGVNDLAVHHS----GKLALTVGR-DDCLAMVNLVRGRR 164 (343)
Q Consensus 95 ~~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~v~~i~~~~~----~~~l~~~~~-d~~i~~wd~~~~~~ 164 (343)
+ +++++|+.|.+|++....... .-.++.-|.+.|..++|..+ +..|++++. |-.|++-|..+++.
T Consensus 101 g-----eliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~ 175 (350)
T KOG0641|consen 101 G-----ELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQG 175 (350)
T ss_pred c-----CeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCc
Confidence 9 899999999999998764322 22456779999999999754 456776654 66677778777775
Q ss_pred eEEEEc-CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec---C-----CcceEEeeecC-CCeEEEEeCCCc
Q 019326 165 SFYHKI-GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD---G-----KKRILCAAPGE-NGVLFTGGEDRS 233 (343)
Q Consensus 165 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~---~-----~~~i~~~~~~~-~~~l~~~~~dg~ 233 (343)
...... .+.+.. -++-++-.++.+ .|.+|+.||++-..++..+. | ...|.+++..+ +++|++|-.|..
T Consensus 176 ~~a~sghtghila-lyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dss 254 (350)
T KOG0641|consen 176 FHALSGHTGHILA-LYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSS 254 (350)
T ss_pred ceeecCCcccEEE-EEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCc
Confidence 544332 233322 234467778888 89999999999998888876 2 25688888874 678999999999
Q ss_pred EEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeE
Q 019326 234 ITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTC 313 (343)
Q Consensus 234 i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~ 313 (343)
..+||++-+++++.+. .|...|.++.|+|... ++++++.|..|++=|+......+...+....+..++..
T Consensus 255 c~lydirg~r~iq~f~-phsadir~vrfsp~a~---------yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~ 324 (350)
T KOG0641|consen 255 CMLYDIRGGRMIQRFH-PHSADIRCVRFSPGAH---------YLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQ 324 (350)
T ss_pred eEEEEeeCCceeeeeC-CCccceeEEEeCCCce---------EEEEecccceEEEeecccchhhcCceEEEEeccCceEE
Confidence 9999999999999999 9999999999999887 99999999999999998653222222233456666777
Q ss_pred EEcCCCCceeccccCCCCC
Q 019326 314 LAGSSTKSFKRPQIGDSAP 332 (343)
Q Consensus 314 ~~~s~~~~~~~~~~~~~~~ 332 (343)
+.|.|..--.++.+.|...
T Consensus 325 ~rwh~~d~sfisssadkt~ 343 (350)
T KOG0641|consen 325 CRWHPQDFSFISSSADKTA 343 (350)
T ss_pred EEecCccceeeeccCcceE
Confidence 8888876666666666544
No 122
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.96 E-value=4e-25 Score=189.07 Aligned_cols=317 Identities=17% Similarity=0.176 Sum_probs=233.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
.|+++..++.+.+|+...... +. ......++...+.|+++.-. =+.++.|+.+|.+++|++++++.+.++
T Consensus 126 ~lia~d~~~~l~vw~~s~~~~------e~-~l~~~~~~~~~~~Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f 198 (910)
T KOG1539|consen 126 HLIAVDISNILFVWKTSSIQE------EL-YLQSTFLKVEGDFITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTF 198 (910)
T ss_pred eEEEEEccCcEEEEEeccccc------cc-cccceeeeccCCceeeEecchhheeeEEEeecCCcEEEEEeccCcEEEEe
Confidence 367888899999999876210 10 12122223333338887665 577899999999999999999999999
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCC-EEEEEeCCCeEEEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGK-LALTVGRDDCLAMV 157 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~~~d~~i~~w 157 (343)
+.+ ...|+++.-+|-- ..++.|..+|+|.+++++.++.+.+++...++|++++|..||+ .+++++..|.+.+|
T Consensus 199 ~~~-~s~IT~ieqsPaL-----DVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~w 272 (910)
T KOG1539|consen 199 QEF-FSRITAIEQSPAL-----DVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFW 272 (910)
T ss_pred ccc-ccceeEeccCCcc-----eEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEE
Confidence 999 8999999999988 7999999999999999999999999995569999999999985 56666777999999
Q ss_pred EccCCceeEEEE--cCCcceEEEEeCCCCEEEEE-eCCcEEEE-------------------------------------
Q 019326 158 NLVRGRRSFYHK--IGKEASLIKFDGSGEKFFMV-TEEKVGIH------------------------------------- 197 (343)
Q Consensus 158 d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~i~~~------------------------------------- 197 (343)
|++..+...... +.+.+....|.|....++++ .|+.+++|
T Consensus 273 DLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ils 352 (910)
T KOG1539|consen 273 DLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILS 352 (910)
T ss_pred EcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEe
Confidence 998766543322 22334444444444444443 33333322
Q ss_pred ---------------------------------------------------------------------------Ecccc
Q 019326 198 ---------------------------------------------------------------------------QAEDA 202 (343)
Q Consensus 198 ---------------------------------------------------------------------------d~~~~ 202 (343)
+.++.
T Consensus 353 a~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~ 432 (910)
T KOG1539|consen 353 AKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNK 432 (910)
T ss_pred cccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCc
Confidence 22221
Q ss_pred ee-EEEecCC------cceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEe--cccccccEEEEEEEecCCCCCCCC
Q 019326 203 KL-LCELDGK------KRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCI--EDAHSARVKGIVVLTKNDGGSTAE 272 (343)
Q Consensus 203 ~~-~~~~~~~------~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~~~ 272 (343)
.. ...+.+. ..+++++.+ -|++.+.|...|.|.+|++++|-...++ ..+|..+|++++....++
T Consensus 433 ~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~------ 506 (910)
T KOG1539|consen 433 TSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNR------ 506 (910)
T ss_pred ccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCc------
Confidence 11 1112222 346677776 5888999999999999999999888887 238999999999988887
Q ss_pred CCeEEEEEcCCCcEEEEeccCcccc------CCC------------------------------ccccc-ccccceeEEE
Q 019326 273 NPYLVASASSDGVICVWDVRMAIKE------KPL------------------------------PLAEA-KTNSRLTCLA 315 (343)
Q Consensus 273 ~~~~l~s~~~dg~i~vwd~~~~~~~------~~~------------------------------~~~~~-~~~~~i~~~~ 315 (343)
.+++++.||.+++||.+..... ... -+..+ .+..+|+.++
T Consensus 507 ---~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~ 583 (910)
T KOG1539|consen 507 ---LLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMT 583 (910)
T ss_pred ---eEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeE
Confidence 9999999999999999876200 000 01111 2567899999
Q ss_pred cCCCCceeccccCCCCCCCccccCc
Q 019326 316 GSSTKSFKRPQIGDSAPKGEEKASM 340 (343)
Q Consensus 316 ~s~~~~~~~~~~~~~~~~~~~~~~~ 340 (343)
|||||++++....|..++.++.+.+
T Consensus 584 FS~DgrWlisasmD~tIr~wDlpt~ 608 (910)
T KOG1539|consen 584 FSPDGRWLISASMDSTIRTWDLPTG 608 (910)
T ss_pred eCCCCcEEEEeecCCcEEEEeccCc
Confidence 9999999999999999998887653
No 123
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.96 E-value=2.6e-25 Score=184.61 Aligned_cols=265 Identities=12% Similarity=0.094 Sum_probs=198.5
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceE-EEeeCCCeEEEEECCCcceeeeeeecc
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNL-FSTSADGFVSIFDADPFVLLTSVKVHK 130 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~ 130 (343)
+..+++++.|+.|++||+.+++.+..+..+ ..+.+++|+|++ +.+ ++++.++.|++||..+++....+..+.
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~--~~~~~l~~~~dg-----~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 73 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVG--QRPRGITLSKDG-----KLLYVCASDSDTIQVIDLATGEVIGTLPSGP 73 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECC--CCCCceEECCCC-----CEEEEEECCCCeEEEEECCCCcEEEeccCCC
Confidence 357889999999999999999988888766 446789999998 555 667789999999999988877776544
Q ss_pred ccEEEEEEecCCCEEEEE-eCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eC-CcEEEEEcccceeEEE
Q 019326 131 KGVNDLAVHHSGKLALTV-GRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TE-EKVGIHQAEDAKLLCE 207 (343)
Q Consensus 131 ~~v~~i~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~d~~~~~~~~~ 207 (343)
. +..++|+|+++.++++ +.++.+++||+++.+.+........+..++++|++..++++ .+ ..+.+||..+++....
T Consensus 74 ~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~ 152 (300)
T TIGR03866 74 D-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDN 152 (300)
T ss_pred C-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEE
Confidence 3 5678999999877655 56899999999988777666666667889999999999988 44 3567789988877766
Q ss_pred ecCCcceEEeeec-CCCeEE-EEeCCCcEEEEECCCCceeEEeccccc-------ccEEEEEEEecCCCCCCCCCCeEE-
Q 019326 208 LDGKKRILCAAPG-ENGVLF-TGGEDRSITAWDTNSGKVAYCIEDAHS-------ARVKGIVVLTKNDGGSTAENPYLV- 277 (343)
Q Consensus 208 ~~~~~~i~~~~~~-~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~~~~~~~~~l- 277 (343)
+.......++.|+ ++..++ ++..++.|++||+.+++.+..+. .+. .....+++++++. ++
T Consensus 153 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~s~dg~---------~~~ 222 (300)
T TIGR03866 153 VLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKIT-FEIPGVHPEAVQPVGIKLTKDGK---------TAF 222 (300)
T ss_pred EEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeee-ecccccccccCCccceEECCCCC---------EEE
Confidence 5544556778887 455664 44568999999999998777664 221 1234677888776 64
Q ss_pred EEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceecccc-CCCCCCCccccC
Q 019326 278 ASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQI-GDSAPKGEEKAS 339 (343)
Q Consensus 278 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~-~~~~~~~~~~~~ 339 (343)
++.+.++.|.+||+++++... .......+.+++|+|++.+++.+. .++.+..++...
T Consensus 223 ~~~~~~~~i~v~d~~~~~~~~-----~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~ 280 (300)
T TIGR03866 223 VALGPANRVAVVDAKTYEVLD-----YLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAA 280 (300)
T ss_pred EEcCCCCeEEEEECCCCcEEE-----EEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCC
Confidence 444567789999998764221 223345689999999999887754 466666655543
No 124
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.95 E-value=2e-25 Score=180.94 Aligned_cols=302 Identities=14% Similarity=0.117 Sum_probs=226.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCC--------
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTS-------- 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~-------- 72 (343)
++++|.++|.|.||+... .+.......|.+.|.+++.- ...|++|+.|..|..||-.-.
T Consensus 259 dviTgDS~G~i~Iw~~~~------------~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~~y~k~r~~elP 326 (626)
T KOG2106|consen 259 DVITGDSGGNILIWSKGT------------NRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDDNYRKLRETELP 326 (626)
T ss_pred CEEeecCCceEEEEeCCC------------ceEEeEeeecCCceEEEEEecCccEeecCccceEEeccccccccccccCc
Confidence 478999999999999865 22223333899999999998 667888999999999984300
Q ss_pred --------------------------------eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc
Q 019326 73 --------------------------------SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120 (343)
Q Consensus 73 --------------------------------~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 120 (343)
......++| ......++.+|.. +++++++.|+.+++|+ ..
T Consensus 327 e~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh-~delwgla~hps~-----~q~~T~gqdk~v~lW~--~~ 398 (626)
T KOG2106|consen 327 EQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGH-GDELWGLATHPSK-----NQLLTCGQDKHVRLWN--DH 398 (626)
T ss_pred hhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEec-ccceeeEEcCCCh-----hheeeccCcceEEEcc--CC
Confidence 011122456 6788899999988 7999999999999999 44
Q ss_pred ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEc
Q 019326 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQA 199 (343)
Q Consensus 121 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~ 199 (343)
+++.+.. -..++.++.|+|.| .++.|...|...+.|.++...+.......++++++|+|+|..++++ .|+.|++|.+
T Consensus 399 k~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~V 476 (626)
T KOG2106|consen 399 KLEWTKI-IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRV 476 (626)
T ss_pred ceeEEEE-ecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEE
Confidence 5555554 46788999999999 9999999999999999997777777778999999999999999999 9999999988
Q ss_pred ccce-eEEEec--CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEec-----------------ccccccEEE
Q 019326 200 EDAK-LLCELD--GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIE-----------------DAHSARVKG 258 (343)
Q Consensus 200 ~~~~-~~~~~~--~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----------------~~h~~~v~~ 258 (343)
.... ...... +..+|+.+.|+ +++++.+-+.|-.|..|....-+.....+ ..|...|..
T Consensus 477 s~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a 556 (626)
T KOG2106|consen 477 SANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINA 556 (626)
T ss_pred CCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHH
Confidence 7543 333332 44899999999 67899999999999999543322111111 234455555
Q ss_pred EEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCc
Q 019326 259 IVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~ 335 (343)
++-+...+ ++++|...|+|++|...-.....+.... ..+...|.+++|..+..+++....|..+.++
T Consensus 557 ~~rs~~~~---------~lA~gdd~g~v~lf~yPc~s~rA~~he~-~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW 623 (626)
T KOG2106|consen 557 VARSHCEK---------LLASGDDFGKVHLFSYPCSSPRAPSHEY-GGHSSHVTNVAFLCKDSHLISTGKDTSIMQW 623 (626)
T ss_pred hhhhhhhh---------hhhccccCceEEEEccccCCCcccceee-ccccceeEEEEEeeCCceEEecCCCceEEEE
Confidence 55555555 9999999999999998755322222222 2345569999999887777766666655544
No 125
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.95 E-value=4.5e-25 Score=184.70 Aligned_cols=259 Identities=17% Similarity=0.160 Sum_probs=206.2
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecC-CCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPA-HLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
+||++=.+|.|.+|++... .-+...+.+ ....|.+++|. +..|.+.+.+|.|.-||+.+++....+.
T Consensus 39 ~lAvsRt~g~IEiwN~~~~-----------w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~~~~d 107 (691)
T KOG2048|consen 39 QLAVSRTDGNIEIWNLSNN-----------WFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQKYNID 107 (691)
T ss_pred ceeeeccCCcEEEEccCCC-----------ceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCceeEEec
Confidence 4788889999999999861 222333344 45789999999 9999999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceee--eeeeccccEEEEEEecCCCEEEEEeCCCeEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLT--SVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMV 157 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~w 157 (343)
.. .+.|++++.+|.+ ..++.|+.||.+..++...++... .+...++.|.+++|+|++..+++|+.||.|++|
T Consensus 108 ~~-gg~IWsiai~p~~-----~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriw 181 (691)
T KOG2048|consen 108 SN-GGAIWSIAINPEN-----TILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIW 181 (691)
T ss_pred CC-CcceeEEEeCCcc-----ceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEE
Confidence 88 8999999999998 799999999988888877765443 333456899999999999999999999999999
Q ss_pred EccCCceeEEEEc-----CC----cceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeE
Q 019326 158 NLVRGRRSFYHKI-----GK----EASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVL 225 (343)
Q Consensus 158 d~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l 225 (343)
|..++..+..... .. -+.++.+- ....++++ +.|.|.+||...+.+++.+. |...|.+++..+ ++++
T Consensus 182 d~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~L-rd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~v 260 (691)
T KOG2048|consen 182 DVKSGQTLHIITMQLDRLSKREPTIVWSVLFL-RDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRV 260 (691)
T ss_pred EcCCCceEEEeeecccccccCCceEEEEEEEe-ecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeE
Confidence 9999987763332 22 13445555 44566777 99999999999999999888 889999999985 4899
Q ss_pred EEEeCCCcEEEEECCCCce---eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 226 FTGGEDRSITAWDTNSGKV---AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 226 ~~~~~dg~i~i~d~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
++++.|+.|..|...+... .......|...|.+++..++ .+++|+.|..+.+=
T Consensus 261 fsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~-----------~l~sgG~d~~l~i~ 316 (691)
T KOG2048|consen 261 FSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN-----------ALISGGRDFTLAIC 316 (691)
T ss_pred EEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc-----------eEEecceeeEEEEc
Confidence 9999999999998876643 22222378888888888776 45555555544443
No 126
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.95 E-value=9.2e-26 Score=171.27 Aligned_cols=274 Identities=13% Similarity=0.124 Sum_probs=211.5
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEE---eEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQ---LFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLG 76 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~---~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~ 76 (343)
+++|++||.|-+||++.......++-..+..+ ...-.+|+-.|..+.|. ..++.+++.|.++++||..+.+...
T Consensus 59 mlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~ 138 (397)
T KOG4283|consen 59 MLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAV 138 (397)
T ss_pred EeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccceEEEeecccceeeE
Confidence 68999999999999987443222222222222 22335788899999997 6789999999999999999998888
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCC-EEEEEeCCCeEE
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGK-LALTVGRDDCLA 155 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~~~d~~i~ 155 (343)
.|.-. +.|.+-+++|-.. .-.++++|..+-.|++.|+..+..-+++.+|.+.|.++.|+|... .|++|+.||.|+
T Consensus 139 ~F~me--~~VYshamSp~a~--sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~ir 214 (397)
T KOG4283|consen 139 DFKME--GKVYSHAMSPMAM--SHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIR 214 (397)
T ss_pred EeecC--ceeehhhcChhhh--cceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEE
Confidence 88755 7888888887541 114788888899999999999999999999999999999999765 578899999999
Q ss_pred EEEccCCc-eeE---------------EEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEE-ec---CCc--
Q 019326 156 MVNLVRGR-RSF---------------YHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCE-LD---GKK-- 212 (343)
Q Consensus 156 ~wd~~~~~-~~~---------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~-~~---~~~-- 212 (343)
+||++.-. +.. ...+.+.+..++|..++.+++++ .|..+++|+..+|+.... +. ++.
T Consensus 215 lWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~ 294 (397)
T KOG4283|consen 215 LWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTT 294 (397)
T ss_pred EEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCcccccccccccccccc
Confidence 99998641 111 11233567889999999999999 999999999988764321 11 111
Q ss_pred --ceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 213 --RILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 213 --~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
.+. +..-+...++---.++.+.++++-++..+..+. .|...|.+.++.|+-+ ...++..|+.|..|-
T Consensus 295 ~~~~~-~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~-~h~k~i~c~~~~~~fq---------~~~tg~~d~ni~~w~ 363 (397)
T KOG4283|consen 295 SFAVH-IQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLS-THLKRINCAAYRPDFE---------QCFTGDMNGNIYMWS 363 (397)
T ss_pred cceEE-EeecccceEEEEecCCeEEEEEccCceEEEeee-cccceeeEEeecCchh---------hhhccccCCcccccc
Confidence 111 111133344444456899999999999999999 9999999999988876 899999999999998
Q ss_pred c
Q 019326 291 V 291 (343)
Q Consensus 291 ~ 291 (343)
.
T Consensus 364 p 364 (397)
T KOG4283|consen 364 P 364 (397)
T ss_pred c
Confidence 8
No 127
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=3.6e-25 Score=168.89 Aligned_cols=240 Identities=17% Similarity=0.228 Sum_probs=187.8
Q ss_pred CCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC----eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEE
Q 019326 40 AHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS----SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVS 113 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 113 (343)
+|.+-|+++.|+ |+.+|+|+.|++|+|||.... .+....+.| .+.|..+.|.+.. .++.+++++.|+++.
T Consensus 11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah-~~Si~rV~WAhPE---fGqvvA~cS~Drtv~ 86 (361)
T KOG2445|consen 11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAH-DGSIWRVVWAHPE---FGQVVATCSYDRTVS 86 (361)
T ss_pred CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEec-CCcEEEEEecCcc---ccceEEEEecCCcee
Confidence 799999999999 999999999999999996543 556677889 9999999998654 358999999999999
Q ss_pred EEECC---------CcceeeeeeeccccEEEEEEecC--CCEEEEEeCCCeEEEEEccCCceeEEEE-------------
Q 019326 114 IFDAD---------PFVLLTSVKVHKKGVNDLAVHHS--GKLALTVGRDDCLAMVNLVRGRRSFYHK------------- 169 (343)
Q Consensus 114 iwd~~---------~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~------------- 169 (343)
||.-. ......++......|+++.|.|. |-.|++++.||.++||+.-..-.+....
T Consensus 87 iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~ 166 (361)
T KOG2445|consen 87 IWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPG 166 (361)
T ss_pred eeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcc
Confidence 99752 22345566667789999999995 6789999999999999876543222221
Q ss_pred -cCCcceEEEEeCC---CCEEEEEeCC------cEEEEEcccce-e---EEEec-CCcceEEeeecCC-----CeEEEEe
Q 019326 170 -IGKEASLIKFDGS---GEKFFMVTEE------KVGIHQAEDAK-L---LCELD-GKKRILCAAPGEN-----GVLFTGG 229 (343)
Q Consensus 170 -~~~~~~~~~~~~~---~~~~~~~~~~------~i~~~d~~~~~-~---~~~~~-~~~~i~~~~~~~~-----~~l~~~~ 229 (343)
...+..|+.|+|. .+.|+++.+. .+.||...... . +.++. +..+|+.++|.|+ .+|++++
T Consensus 167 ~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~ 246 (361)
T KOG2445|consen 167 KNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVAT 246 (361)
T ss_pred cccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEee
Confidence 2345678888874 4578888555 78888765432 2 22333 8899999999842 3889999
Q ss_pred CCCcEEEEECCCC--------------------ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 230 EDRSITAWDTNSG--------------------KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 230 ~dg~i~i~d~~~~--------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
.|| |+||.++.. +.+..+. .|...|..+.|+-.+. .|++.|.||.||+|
T Consensus 247 kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~-~H~~~VWrv~wNmtGt---------iLsStGdDG~VRLW 315 (361)
T KOG2445|consen 247 KDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELD-DHNGEVWRVRWNMTGT---------ILSSTGDDGCVRLW 315 (361)
T ss_pred cCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeecc-CCCCceEEEEEeeeee---------EEeecCCCceeeeh
Confidence 999 999998731 1334455 8999999999999988 99999999999999
Q ss_pred eccCc
Q 019326 290 DVRMA 294 (343)
Q Consensus 290 d~~~~ 294 (343)
...-.
T Consensus 316 kany~ 320 (361)
T KOG2445|consen 316 KANYN 320 (361)
T ss_pred hhhhh
Confidence 87654
No 128
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=5.6e-26 Score=187.65 Aligned_cols=297 Identities=19% Similarity=0.225 Sum_probs=230.9
Q ss_pred CCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCC
Q 019326 23 YSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVP 100 (343)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~ 100 (343)
.+.+.++++..+...++||++.|.||... |.+|++|+.||+|+||.+.++++++.+... +.|.|++|+|...
T Consensus 381 sp~dLrPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d--~~I~~vaw~P~~~---- 454 (733)
T KOG0650|consen 381 SPKDLRPFPTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD--SEIRSVAWNPLSD---- 454 (733)
T ss_pred ChhhcCCCcceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec--ceeEEEEecCCCC----
Confidence 34556778888889999999999999988 999999999999999999999999999866 7999999999984
Q ss_pred ceEEEeeCCCeEEEEECCCc-------------------------------------ceeeeeeeccccEEEEEEecCCC
Q 019326 101 RNLFSTSADGFVSIFDADPF-------------------------------------VLLTSVKVHKKGVNDLAVHHSGK 143 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~~-------------------------------------~~~~~~~~~~~~v~~i~~~~~~~ 143 (343)
..++++.....+.+-+..-| .-+...-.|...|..+.|+..|.
T Consensus 455 ~~vLAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGD 534 (733)
T KOG0650|consen 455 LCVLAVAVGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGD 534 (733)
T ss_pred ceeEEEEecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCc
Confidence 23444444444555443110 00122234778999999999999
Q ss_pred EEEEEeCC---CeEEEEEccCCceeEEE-EcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec-CCcceEEee
Q 019326 144 LALTVGRD---DCLAMVNLVRGRRSFYH-KIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD-GKKRILCAA 218 (343)
Q Consensus 144 ~l~~~~~d---~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~ 218 (343)
||++...+ ..|.|+++...+....+ ...+.+.++.|+|...+++++....|++||+..+..++++. ....|..++
T Consensus 535 YlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg~kwiS~ms 614 (733)
T KOG0650|consen 535 YLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTGSKWISSMS 614 (733)
T ss_pred eEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcCCeeeeeee
Confidence 99998764 56889998776644333 45688999999999999999999999999999988887776 566788899
Q ss_pred ecC-CCeEEEEeCCCcEEEEECCCC-ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc--Cc
Q 019326 219 PGE-NGVLFTGGEDRSITAWDTNSG-KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR--MA 294 (343)
Q Consensus 219 ~~~-~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~--~~ 294 (343)
.++ |..|+.|+.|+.+..||+.-. ++.+++. .|...+++++|++.-+ ++++|+.||++.|+--. +.
T Consensus 615 ihp~GDnli~gs~d~k~~WfDldlsskPyk~lr-~H~~avr~Va~H~ryP---------Lfas~sdDgtv~Vfhg~VY~D 684 (733)
T KOG0650|consen 615 IHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLR-LHEKAVRSVAFHKRYP---------LFASGSDDGTVIVFHGMVYND 684 (733)
T ss_pred ecCCCCeEEEecCCCeeEEEEcccCcchhHHhh-hhhhhhhhhhhccccc---------eeeeecCCCcEEEEeeeeehh
Confidence 984 678999999999999999755 5667777 9999999999999988 99999999999998432 22
Q ss_pred c--ccCCCccccccc-----ccceeEEEcCCCCceeccccCCCCCCCc
Q 019326 295 I--KEKPLPLAEAKT-----NSRLTCLAGSSTKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 295 ~--~~~~~~~~~~~~-----~~~i~~~~~s~~~~~~~~~~~~~~~~~~ 335 (343)
- .....|+..... ...|....|+|...++.++.+++.++.+
T Consensus 685 l~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 685 LLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred hhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 1 111122222221 1236777799999999999999877653
No 129
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.95 E-value=1.1e-25 Score=189.71 Aligned_cols=307 Identities=16% Similarity=0.175 Sum_probs=230.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-------------CceEEEeeCCCeEEEEE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-------------GTAAASGGTDDTIHLYD 68 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-------------~~~l~s~~~dg~i~iwd 68 (343)
.|.+...|..|+|||++.... ......+--|...|..+.-- ...|.|++.|++||+|+
T Consensus 338 klscVYndhSlYvWDvrD~~k---------vgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~ 408 (1080)
T KOG1408|consen 338 KLSCVYNDHSLYVWDVRDVNK---------VGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWD 408 (1080)
T ss_pred eEEEEEcCceEEEEecccccc---------ccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEee
Confidence 366777899999999987321 22223333577777766431 35699999999999999
Q ss_pred cCCCeeee-------------------------------------EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCe
Q 019326 69 LSTSSSLG-------------------------------------AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF 111 (343)
Q Consensus 69 ~~~~~~~~-------------------------------------~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 111 (343)
++.+..-. ..... ...+.+++.+|++ ++|++|..-|.
T Consensus 409 l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~-r~G~R~~~vSp~g-----qhLAsGDr~Gn 482 (1080)
T KOG1408|consen 409 LAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDS-RFGFRALAVSPDG-----QHLASGDRGGN 482 (1080)
T ss_pred cccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCc-ccceEEEEECCCc-----ceecccCccCc
Confidence 97521000 00112 3579999999999 89999999999
Q ss_pred EEEEECCCcceeeeeeeccccEEEEEEecC---CCEEEEEeCCCeEEEEEccCCceeE--EEEcCCcceEEEEeCCC--C
Q 019326 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHS---GKLALTVGRDDCLAMVNLVRGRRSF--YHKIGKEASLIKFDGSG--E 184 (343)
Q Consensus 112 i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~~~~~~~~~~~~~~--~ 184 (343)
++||++...+....+..|...|.|+.|+.. .++|++++.|..|.+||....-.+. ...+...|+.+.|.-+| .
T Consensus 483 lrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~ 562 (1080)
T KOG1408|consen 483 LRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNR 562 (1080)
T ss_pred eEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCce
Confidence 999999998999999999999999999863 4789999999999999997654322 23446789999998877 5
Q ss_pred EEEEE-eCCcEEEEEccc---ceeEEEec---CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecc--cccc
Q 019326 185 KFFMV-TEEKVGIHQAED---AKLLCELD---GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIED--AHSA 254 (343)
Q Consensus 185 ~~~~~-~~~~i~~~d~~~---~~~~~~~~---~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~h~~ 254 (343)
.++++ .|..|..--.+. +....... ....+..++..+ .+++++++.|..|+|||+.+++..+.|+. +|.+
T Consensus 563 ~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG 642 (1080)
T KOG1408|consen 563 KMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEG 642 (1080)
T ss_pred EEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCC
Confidence 66666 555554433332 22222211 345677888764 47999999999999999999999999984 3455
Q ss_pred cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCC
Q 019326 255 RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKG 334 (343)
Q Consensus 255 ~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~ 334 (343)
..-.+...|.+. ||++.+.|.++.++|.-+++.... .+.+..-|+.+.|++|.+.++...+|+=+..
T Consensus 643 ~lIKv~lDPSgi---------Y~atScsdktl~~~Df~sgEcvA~----m~GHsE~VTG~kF~nDCkHlISvsgDgCIFv 709 (1080)
T KOG1408|consen 643 DLIKVILDPSGI---------YLATSCSDKTLCFVDFVSGECVAQ----MTGHSEAVTGVKFLNDCKHLISVSGDGCIFV 709 (1080)
T ss_pred ceEEEEECCCcc---------EEEEeecCCceEEEEeccchhhhh----hcCcchheeeeeecccchhheeecCCceEEE
Confidence 677777778776 999999999999999999864332 3466778999999999999999999985554
Q ss_pred cc
Q 019326 335 EE 336 (343)
Q Consensus 335 ~~ 336 (343)
+.
T Consensus 710 W~ 711 (1080)
T KOG1408|consen 710 WK 711 (1080)
T ss_pred EE
Confidence 43
No 130
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=8.9e-27 Score=197.57 Aligned_cols=262 Identities=20% Similarity=0.303 Sum_probs=195.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC---CCeEEEEec---CceEEEeeCCCeEEEEEcCC---C
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL---SPITTVAVS---GTAAASGGTDDTIHLYDLST---S 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~---~ 72 (343)
+|++++. ..++||.+.+.. +.......+++.. -.+..+.|. .++|||++..|.|.+||+.. .
T Consensus 53 qiv~AGr-s~lklyai~~~~--------~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rn 123 (839)
T KOG0269|consen 53 QIVVAGR-SLLKLYAINPND--------FSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRN 123 (839)
T ss_pred eeEEecc-cceeeEeeCccc--------CCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCccccc
Confidence 4455554 367788776521 1122222222221 224456676 78999999999999999987 6
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecC-CCEEEEEeCC
Q 019326 73 SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHS-GKLALTVGRD 151 (343)
Q Consensus 73 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~~~d 151 (343)
+.+..|..| ...++++.|++.. +.+|++|+.||+|++||++..+...++.+....|.++.|+|. +..++++...
T Consensus 124 k~l~~f~EH-~Rs~~~ldfh~te----p~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~ds 198 (839)
T KOG0269|consen 124 KLLTVFNEH-ERSANKLDFHSTE----PNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDS 198 (839)
T ss_pred hhhhHhhhh-ccceeeeeeccCC----ccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCC
Confidence 777788999 9999999999988 689999999999999999999999999988889999999995 5889999999
Q ss_pred CeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEe-cCCcceEEeeecC-CCeEEEEe
Q 019326 152 DCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCEL-DGKKRILCAAPGE-NGVLFTGG 229 (343)
Q Consensus 152 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~i~~~~~~~-~~~l~~~~ 229 (343)
|.+++||++.... +..++ .|.++|.|+.|+| +.+||+|+
T Consensus 199 G~lqlWDlRqp~r---------------------------------------~~~k~~AH~GpV~c~nwhPnr~~lATGG 239 (839)
T KOG0269|consen 199 GYLQLWDLRQPDR---------------------------------------CEKKLTAHNGPVLCLNWHPNREWLATGG 239 (839)
T ss_pred ceEEEeeccCchh---------------------------------------HHHHhhcccCceEEEeecCCCceeeecC
Confidence 9999999986542 22222 3888899999986 46999999
Q ss_pred CCCcEEEEECCCCc--eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc--CCCcEEEEeccCccccCCCccccc
Q 019326 230 EDRSITAWDTNSGK--VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS--SDGVICVWDVRMAIKEKPLPLAEA 305 (343)
Q Consensus 230 ~dg~i~i~d~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~ 305 (343)
.|++|+|||+.+.+ ++.++. ...+|..++|-|... ++|++++ .|-.|+|||++.+- +|...+
T Consensus 240 RDK~vkiWd~t~~~~~~~~tIn--Tiapv~rVkWRP~~~--------~hLAtcsmv~dtsV~VWDvrRPY----IP~~t~ 305 (839)
T KOG0269|consen 240 RDKMVKIWDMTDSRAKPKHTIN--TIAPVGRVKWRPARS--------YHLATCSMVVDTSVHVWDVRRPY----IPYATF 305 (839)
T ss_pred CCccEEEEeccCCCccceeEEe--ecceeeeeeeccCcc--------chhhhhhccccceEEEEeecccc----ccceee
Confidence 99999999998665 344444 668999999999876 3788776 47789999999752 343333
Q ss_pred -ccccceeEEEcCCCCceeccccCCC
Q 019326 306 -KTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 306 -~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
.+...++.++|........+..+++
T Consensus 306 ~eH~~~vt~i~W~~~d~~~l~s~sKD 331 (839)
T KOG0269|consen 306 LEHTDSVTGIAWDSGDRINLWSCSKD 331 (839)
T ss_pred eccCccccceeccCCCceeeEeecCc
Confidence 3344577788876444444444433
No 131
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.95 E-value=4.8e-25 Score=190.51 Aligned_cols=243 Identities=12% Similarity=0.110 Sum_probs=203.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHH 81 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 81 (343)
.|++++.||.|++|+...... ....+.-+...|.+++..+++|++|+.+++|.+|...+++.-..+...
T Consensus 27 fi~tcgsdg~ir~~~~~sd~e-----------~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rf 95 (933)
T KOG1274|consen 27 FICTCGSDGDIRKWKTNSDEE-----------EPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARF 95 (933)
T ss_pred EEEEecCCCceEEeecCCccc-----------CCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCccceeeee
Confidence 478999999999999876311 111222278899999999889999999999999999998877666666
Q ss_pred CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccC
Q 019326 82 ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR 161 (343)
Q Consensus 82 ~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~ 161 (343)
.-++.+++|+.++ ++++.|+.|-.|++-+..+......+++|.++|.++.|+|++++|++.+-||.|++||+.+
T Consensus 96 -tlp~r~~~v~g~g-----~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~ 169 (933)
T KOG1274|consen 96 -TLPIRDLAVSGSG-----KMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQD 169 (933)
T ss_pred -eccceEEEEecCC-----cEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEccc
Confidence 7899999999999 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred CceeEEEEc---------CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec---CCcceEEeeecC-CCeEEE
Q 019326 162 GRRSFYHKI---------GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD---GKKRILCAAPGE-NGVLFT 227 (343)
Q Consensus 162 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~~-~~~l~~ 227 (343)
+........ ...+..++|+|++..+++. .++.|++|+..+......+. +...+.++.|++ |.|||+
T Consensus 170 ~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAA 249 (933)
T KOG1274|consen 170 GILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAA 249 (933)
T ss_pred chhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEee
Confidence 875443321 2345669999996666655 99999999999999888887 445599999995 789999
Q ss_pred EeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCC
Q 019326 228 GGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 228 ~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
++.+|.|.|||..+-+. . .....|.+++|.|+.+
T Consensus 250 s~~~g~I~vWnv~t~~~----~-~~~~~Vc~~aw~p~~n 283 (933)
T KOG1274|consen 250 STLDGQILVWNVDTHER----H-EFKRAVCCEAWKPNAN 283 (933)
T ss_pred eccCCcEEEEecccchh----c-cccceeEEEecCCCCC
Confidence 99999999999997222 2 3457899999998876
No 132
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1.5e-27 Score=200.77 Aligned_cols=230 Identities=18% Similarity=0.295 Sum_probs=205.7
Q ss_pred ecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEE
Q 019326 38 YPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIF 115 (343)
Q Consensus 38 ~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 115 (343)
+..|...|.|+..- +..+++|+.|..+-+|.+.....+..+.+| ..+|.++.|++.. .+|++|+.+|+|++|
T Consensus 24 ~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~h-espIeSl~f~~~E-----~LlaagsasgtiK~w 97 (825)
T KOG0267|consen 24 FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGH-ESPIESLTFDTSE-----RLLAAGSASGTIKVW 97 (825)
T ss_pred hhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeecc-CCcceeeecCcch-----hhhcccccCCceeee
Confidence 34688888888865 789999999999999999888888889999 9999999999998 799999999999999
Q ss_pred ECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCc
Q 019326 116 DADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEK 193 (343)
Q Consensus 116 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~ 193 (343)
|++..+.++++.+|...+.++.|+|-+.+.+.++.|..+++||++...+..... +...+.++.|+|+|++++.+ .|..
T Consensus 98 DleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~t 177 (825)
T KOG0267|consen 98 DLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNT 177 (825)
T ss_pred ehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcce
Confidence 999999999999999999999999999999999999999999999666665555 44667889999999999999 7799
Q ss_pred EEEEEcccceeEEEec-CCcceEEeeecCCC-eEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCC
Q 019326 194 VGIHQAEDAKLLCELD-GKKRILCAAPGENG-VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTA 271 (343)
Q Consensus 194 i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 271 (343)
+++||...++....|. |...+.++.+++.+ +++.|+.|+++++||+++.+.+.... .....|.+++|++++.
T Consensus 178 vki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~-~~~~~v~~~~fn~~~~----- 251 (825)
T KOG0267|consen 178 VKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGK-PETDGVRSLAFNPDGK----- 251 (825)
T ss_pred eeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccC-CccCCceeeeecCCce-----
Confidence 9999999999999999 89999999998654 67789999999999999999888888 6688999999999986
Q ss_pred CCCeEEEEEcCC
Q 019326 272 ENPYLVASASSD 283 (343)
Q Consensus 272 ~~~~~l~s~~~d 283 (343)
.+++|..+
T Consensus 252 ----~~~~G~q~ 259 (825)
T KOG0267|consen 252 ----IVLSGEQI 259 (825)
T ss_pred ----eeecCchh
Confidence 66666544
No 133
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=9e-26 Score=180.06 Aligned_cols=229 Identities=22% Similarity=0.286 Sum_probs=183.9
Q ss_pred CceEEEeeCCCeEEEEEcCCCeee---------------------eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSL---------------------GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG 110 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~---------------------~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg 110 (343)
|+++|.|+.|..|.|||+.-...+ ..-.+| +..|.+|+|+..-. +.|++|+.|.
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gH-Tdavl~Ls~n~~~~----nVLaSgsaD~ 266 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGH-TDAVLALSWNRNFR----NVLASGSADK 266 (463)
T ss_pred cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccc-hHHHHHHHhccccc----eeEEecCCCc
Confidence 789999999999999998622100 011246 88889999987763 7999999999
Q ss_pred eEEEEECCCcceeeeeeeccccEEEEEEecC-CCEEEEEeCCCeEEEEEccC-CceeEEEEcCCcceEEEEeCCCCEEEE
Q 019326 111 FVSIFDADPFVLLTSVKVHKKGVNDLAVHHS-GKLALTVGRDDCLAMVNLVR-GRRSFYHKIGKEASLIKFDGSGEKFFM 188 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (343)
+|++||+.++++..++..|.+.|.++.|+|. ...|++|+.|+++.+.|.|. ..........+.+..++|.|.....+.
T Consensus 267 TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~ 346 (463)
T KOG0270|consen 267 TVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFF 346 (463)
T ss_pred eEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEE
Confidence 9999999999999999999999999999996 47999999999999999994 334467778899999999997765444
Q ss_pred E--eCCcEEEEEcccc-eeEEEec-CCcceEEeeec--CCCeEEEEeCCCcEEEEECCCCceeEEeccccc---ccEEEE
Q 019326 189 V--TEEKVGIHQAEDA-KLLCELD-GKKRILCAAPG--ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHS---ARVKGI 259 (343)
Q Consensus 189 ~--~~~~i~~~d~~~~-~~~~~~~-~~~~i~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~---~~v~~~ 259 (343)
+ .||.++-+|+|+. +++.+++ |..+|.+++++ ..+++++++.|+.|++|++....+-... .|. +...|.
T Consensus 347 ~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~--~~~~~~~rl~c~ 424 (463)
T KOG0270|consen 347 VSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVK--EHSFKLGRLHCF 424 (463)
T ss_pred EecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccc--cccccccceeec
Confidence 4 8999999999975 8888887 99999999998 3579999999999999998754432221 122 234555
Q ss_pred EEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 260 VVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
++.|+-. .+++.|+..+.++|||+.+..
T Consensus 425 ~~~~~~a--------~~la~GG~k~~~~vwd~~~~~ 452 (463)
T KOG0270|consen 425 ALDPDVA--------FTLAFGGEKAVLRVWDIFTNS 452 (463)
T ss_pred ccCCCcc--------eEEEecCccceEEEeecccCh
Confidence 5555544 278899999999999998763
No 134
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.94 E-value=2.3e-25 Score=180.34 Aligned_cols=286 Identities=11% Similarity=0.118 Sum_probs=218.0
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEe--eCCCeEEEEEcCCC--ee--e
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASG--GTDDTIHLYDLSTS--SS--L 75 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~--~~dg~i~iwd~~~~--~~--~ 75 (343)
|.+++....+++||....+ ......-......+.++.|+ .+.|+++ +.|..+++|.-... +. +
T Consensus 5 l~~aS~gd~~kl~D~s~~~----------~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~ 74 (673)
T KOG4378|consen 5 LHVASTGDKTKLSDFSDLE----------TKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRV 74 (673)
T ss_pred eeeeccCCceEEeeccccc----------CccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCcccee
Confidence 4455555689999997622 11111111123348999998 5545554 55778999975432 11 1
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEE
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLA 155 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~ 155 (343)
....+ ..-.|++..... .++++|+..+.|+|||++...+.+.+++|...|+++.++....+|++++..|.|.
T Consensus 75 ~k~~g---d~~~Cv~~~s~S-----~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdii 146 (673)
T KOG4378|consen 75 RKLTG---DNAFCVACASQS-----LYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDII 146 (673)
T ss_pred ecccc---chHHHHhhhhcc-----eeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEE
Confidence 11222 233444444444 6999999999999999998778888999999999999999999999999999999
Q ss_pred EEEccCCceeEEEEcC--CcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEec--CCcceEEeeecC--CCeEEE
Q 019326 156 MVNLVRGRRSFYHKIG--KEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELD--GKKRILCAAPGE--NGVLFT 227 (343)
Q Consensus 156 ~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~--~~~l~~ 227 (343)
+..+.++.....+.++ ..+..+.++|..+.++.. .+|.+.+||+....+...+. |..+...++|++ ..+|++
T Consensus 147 ih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vs 226 (673)
T KOG4378|consen 147 IHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVS 226 (673)
T ss_pred EEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEE
Confidence 9999999887777765 456689999998877666 88999999999988877665 888888888884 458999
Q ss_pred EeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccccccc
Q 019326 228 GGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKT 307 (343)
Q Consensus 228 ~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 307 (343)
.+.|..|.+||.+......++. ...+.+.++|.+++. +|+.|+..|.|..||++..+ .|..+...+
T Consensus 227 VG~Dkki~~yD~~s~~s~~~l~--y~~Plstvaf~~~G~---------~L~aG~s~G~~i~YD~R~~k--~Pv~v~sah- 292 (673)
T KOG4378|consen 227 VGYDKKINIYDIRSQASTDRLT--YSHPLSTVAFSECGT---------YLCAGNSKGELIAYDMRSTK--APVAVRSAH- 292 (673)
T ss_pred ecccceEEEeecccccccceee--ecCCcceeeecCCce---------EEEeecCCceEEEEecccCC--CCceEeeec-
Confidence 9999999999999888777776 667899999999887 99999999999999999853 333443333
Q ss_pred ccceeEEEcCCCC
Q 019326 308 NSRLTCLAGSSTK 320 (343)
Q Consensus 308 ~~~i~~~~~s~~~ 320 (343)
...|+|++|-+..
T Consensus 293 ~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 293 DASVTRVAFQPSP 305 (673)
T ss_pred ccceeEEEeeecc
Confidence 3449999997764
No 135
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=2.3e-24 Score=186.31 Aligned_cols=259 Identities=19% Similarity=0.248 Sum_probs=214.2
Q ss_pred CCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC-eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEE
Q 019326 40 AHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS-SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFD 116 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 116 (343)
+|...-+.|+|. |++|++++.||.|++|+.... +....+..+ ...|.+++... .+|++|+.+++|.+|.
T Consensus 11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~-g~~v~~ia~~s-------~~f~~~s~~~tv~~y~ 82 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDIS-GELVSSIACYS-------NHFLTGSEQNTVLRYK 82 (933)
T ss_pred hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhcc-CceeEEEeecc-------cceEEeeccceEEEee
Confidence 688889999998 899999999999999998776 444444435 67888887654 4799999999999999
Q ss_pred CCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCcee-EEEEcCCcceEEEEeCCCCEEEEE-eCCcE
Q 019326 117 ADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRS-FYHKIGKEASLIKFDGSGEKFFMV-TEEKV 194 (343)
Q Consensus 117 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i 194 (343)
+..++.-..+....-++.+++|+.+|++++.|+.|-.|++.++...... ....+..++.++.++|+++++++. .+|.+
T Consensus 83 fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v 162 (933)
T KOG1274|consen 83 FPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKV 162 (933)
T ss_pred CCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceE
Confidence 9988876666667789999999999999999999999999999876644 455677999999999999999999 99999
Q ss_pred EEEEcccceeEEEecC---------CcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccc-cccEEEEEEEe
Q 019326 195 GIHQAEDAKLLCELDG---------KKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAH-SARVKGIVVLT 263 (343)
Q Consensus 195 ~~~d~~~~~~~~~~~~---------~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h-~~~v~~~~~~~ 263 (343)
++|++.++.+...+.. ...+..++|++ ++.++....|+.|.+|+...++....+...+ ...+..+.|+|
T Consensus 163 ~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsP 242 (933)
T KOG1274|consen 163 QIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSP 242 (933)
T ss_pred EEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcC
Confidence 9999999988777651 34466788985 4788888899999999999999888887443 34499999999
Q ss_pred cCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCcee
Q 019326 264 KNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFK 323 (343)
Q Consensus 264 ~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~ 323 (343)
.|. |||+++.||.|.|||+++... ......|.|++|.|+..-+
T Consensus 243 nG~---------YiAAs~~~g~I~vWnv~t~~~--------~~~~~~Vc~~aw~p~~n~i 285 (933)
T KOG1274|consen 243 NGK---------YIAASTLDGQILVWNVDTHER--------HEFKRAVCCEAWKPNANAI 285 (933)
T ss_pred CCc---------EEeeeccCCcEEEEecccchh--------ccccceeEEEecCCCCCee
Confidence 987 999999999999999997321 2233468888887765544
No 136
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=1.1e-24 Score=167.08 Aligned_cols=239 Identities=19% Similarity=0.222 Sum_probs=182.8
Q ss_pred eEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe------------------------------------eee
Q 019326 35 LFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS------------------------------------SLG 76 (343)
Q Consensus 35 ~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~------------------------------------~~~ 76 (343)
+..+++|.+.|++++|+ |.+|+|++.|+.|++|+++.-. .+.
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~ 158 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC 158 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence 34678999999999999 9999999999999999987310 000
Q ss_pred Ee----------------------c-cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccE
Q 019326 77 AI----------------------H-HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGV 133 (343)
Q Consensus 77 ~~----------------------~-~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v 133 (343)
.+ . .| ...|..+-...+ ..+|++++.|..|.+|+++ |+.+..+......-
T Consensus 159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh-~v~~i~iGiA~~-----~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n 231 (420)
T KOG2096|consen 159 VYKLVKKTDGSGSHHFVHIDNLEFERKH-QVDIINIGIAGN-----AKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSN 231 (420)
T ss_pred EEEeeecccCCCCcccccccccccchhc-ccceEEEeecCC-----ceEEEEecCCCcEEEEecC-Cceeeeeccccccc
Confidence 00 0 01 222333333333 3799999999999999999 78898888777777
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEEccCCc--------ee-EEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEccc--
Q 019326 134 NDLAVHHSGKLALTVGRDDCLAMVNLVRGR--------RS-FYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAED-- 201 (343)
Q Consensus 134 ~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~-- 201 (343)
...+.+|+|+++++++..--|++|.+--++ .+ ....+...+..++|+++..+++++ .||.+++||..-
T Consensus 232 ~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY 311 (420)
T KOG2096|consen 232 YDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRY 311 (420)
T ss_pred cceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceE
Confidence 888999999999999999999999874332 11 223345678999999999999999 999999999753
Q ss_pred -----ceeEEEec-----CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCC
Q 019326 202 -----AKLLCELD-----GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTA 271 (343)
Q Consensus 202 -----~~~~~~~~-----~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 271 (343)
.+.++... ..+....+..+|+.-+++.+....+++|..++++...+++..|+..|.++.|++++.
T Consensus 312 ~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~----- 386 (420)
T KOG2096|consen 312 EAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGK----- 386 (420)
T ss_pred ecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHHHhhcCceeeEEecCCCc-----
Confidence 22333331 123344777887666666667788999999999999999889999999999999987
Q ss_pred CCCeEEEEEcCCCcEEEEe
Q 019326 272 ENPYLVASASSDGVICVWD 290 (343)
Q Consensus 272 ~~~~~l~s~~~dg~i~vwd 290 (343)
+++|++ |..++++.
T Consensus 387 ----~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 387 ----YIATCG-DRYVRVIR 400 (420)
T ss_pred ----EEeeec-ceeeeeec
Confidence 888886 67888876
No 137
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.94 E-value=3.2e-24 Score=180.08 Aligned_cols=323 Identities=14% Similarity=0.144 Sum_probs=238.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCC----C-----CcceeeEEe----------EEecCCCCCeEEEEec--CceEEEeeC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSS----D-----QKTLTLTQL----------FSYPAHLSPITTVAVS--GTAAASGGT 60 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~----~-----~~~~~~~~~----------~~~~~h~~~v~~l~~~--~~~l~s~~~ 60 (343)
-|++++.|..||||.+.......+ + .+...+... ..+.||.+.|.++.|+ +..|++++.
T Consensus 208 ~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASa 287 (764)
T KOG1063|consen 208 LLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASA 287 (764)
T ss_pred EEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheeccc
Confidence 489999999999999976442110 0 000111111 1234999999999999 668999999
Q ss_pred CCeEEEEEcCCCe--ee-----eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC---cceeeeeeecc
Q 019326 61 DDTIHLYDLSTSS--SL-----GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP---FVLLTSVKVHK 130 (343)
Q Consensus 61 dg~i~iwd~~~~~--~~-----~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~ 130 (343)
|.++.+|...+.. -+ ....+. ........|+|++ +.+++-+..|..++|.... ..+...+.+|.
T Consensus 288 DksmiiW~pd~~tGiWv~~vRlGe~gg~-a~GF~g~lw~~n~-----~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~ 361 (764)
T KOG1063|consen 288 DKSMIIWKPDENTGIWVDVVRLGEVGGS-AGGFWGGLWSPNS-----NVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHV 361 (764)
T ss_pred CcceEEEecCCccceEEEEEEeeccccc-ccceeeEEEcCCC-----CEEEEecccCcEEEEeccCccceeecccccccc
Confidence 9999999876542 22 222333 5668899999999 7999999999999998432 23455667899
Q ss_pred ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc-----eeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc--
Q 019326 131 KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR-----RSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA-- 202 (343)
Q Consensus 131 ~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~-- 202 (343)
+.|.+++|+|.|.+|++++.|.+-+++-.-..+ ..+.+.++....|+++-+..-.|+.+ .+..+++|+....
T Consensus 362 ~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv 441 (764)
T KOG1063|consen 362 DGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFV 441 (764)
T ss_pred ccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHH
Confidence 999999999999999999999999998755222 12334456778899998876777777 7777888875321
Q ss_pred -----------------------------------------ee----EE------------------------------E
Q 019326 203 -----------------------------------------KL----LC------------------------------E 207 (343)
Q Consensus 203 -----------------------------------------~~----~~------------------------------~ 207 (343)
.. .. -
T Consensus 442 ~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KL 521 (764)
T KOG1063|consen 442 KSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKL 521 (764)
T ss_pred HHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHh
Confidence 00 00 0
Q ss_pred ecCCcceEEeeecC-CCeEEEEeCCC-----cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc
Q 019326 208 LDGKKRILCAAPGE-NGVLFTGGEDR-----SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS 281 (343)
Q Consensus 208 ~~~~~~i~~~~~~~-~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 281 (343)
+.|...|.+++.++ ++++++++... .|++|+..+....+.+. +|+-.|+.|+|+|++. +|++.|
T Consensus 522 YGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~-~HsLTVT~l~FSpdg~---------~LLsvs 591 (764)
T KOG1063|consen 522 YGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELE-GHSLTVTRLAFSPDGR---------YLLSVS 591 (764)
T ss_pred ccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheec-ccceEEEEEEECCCCc---------EEEEee
Confidence 11456789999984 67888877543 49999999999999999 9999999999999998 999999
Q ss_pred CCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccccCc
Q 019326 282 SDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKASM 340 (343)
Q Consensus 282 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 340 (343)
.|.++.+|...........-.....+..-|...+|+|+.++.+.++.|+..+.++..+.
T Consensus 592 RDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 592 RDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred cCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 99999999997653322221112223334788999999999999999999887776554
No 138
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=1.5e-24 Score=173.96 Aligned_cols=266 Identities=15% Similarity=0.135 Sum_probs=218.2
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--Cc-eEEEeeCCCeEEEEEcCCCeee--e
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GT-AAASGGTDDTIHLYDLSTSSSL--G 76 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~~~dg~i~iwd~~~~~~~--~ 76 (343)
.|++++.||.+++|.+.. +. ...++.+.-...||.+.+|. |. .+++++....+..||+.+.+.. .
T Consensus 227 lllvaG~d~~lrifqvDG--------k~--N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~ 296 (514)
T KOG2055|consen 227 LLLVAGLDGTLRIFQVDG--------KV--NPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLK 296 (514)
T ss_pred eEEEecCCCcEEEEEecC--------cc--ChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccccccc
Confidence 378999999999999985 22 22445555567899999998 66 8999999999999999987653 3
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEE
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAM 156 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~ 156 (343)
...+++...+.....++++ ++|+..+..|.|.+....+++.+.+++ -.+.|..++|+.+++.|++++.+|.|.+
T Consensus 297 ~~~g~e~~~~e~FeVShd~-----~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v 370 (514)
T KOG2055|consen 297 PPYGVEEKSMERFEVSHDS-----NFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYV 370 (514)
T ss_pred CCCCcccchhheeEecCCC-----CeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEE
Confidence 3445545678888999999 799999999999999999999999998 5788999999999999999999999999
Q ss_pred EEccCCceeEEEEcCCcce--EEEEeCCCCEEEEE-eCCcEEEEEccc------ceeEEEec-CCcceEEeeecC-CCeE
Q 019326 157 VNLVRGRRSFYHKIGKEAS--LIKFDGSGEKFFMV-TEEKVGIHQAED------AKLLCELD-GKKRILCAAPGE-NGVL 225 (343)
Q Consensus 157 wd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~i~~~d~~~------~~~~~~~~-~~~~i~~~~~~~-~~~l 225 (343)
||++...++..+...+.+. .++.++++.+++++ ..|.|.|||..+ .+++..+. ....|+++.|++ ..+|
T Consensus 371 ~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiL 450 (514)
T KOG2055|consen 371 WNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQIL 450 (514)
T ss_pred EecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhh
Confidence 9999998888887776654 47778999999999 889999999654 34444444 567799999984 5677
Q ss_pred EEEeC--CCcEEEEECCCCceeEEecc--cccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 226 FTGGE--DRSITAWDTNSGKVAYCIED--AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 226 ~~~~~--dg~i~i~d~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+.++. +..+++-.+.+......++. ..-+.|+||+|+|.+. +||.|..+|++.+|.+.
T Consensus 451 AiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG---------~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 451 AIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSG---------YLAVGNEAGRVHLFKLH 512 (514)
T ss_pred hhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCc---------eEEeecCCCceeeEeec
Confidence 76664 67799999888777766662 2335789999999887 99999999999999875
No 139
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=6.6e-25 Score=169.71 Aligned_cols=265 Identities=17% Similarity=0.209 Sum_probs=199.5
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec----CceEEEeeCCCeEEEEEcCCCeeeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS----GTAAASGGTDDTIHLYDLSTSSSLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~l~s~~~dg~i~iwd~~~~~~~~~ 77 (343)
++|++.++|.|++||..+ ...+..+++|...++.++|. +..+.+|+.||+|++||+++......
T Consensus 42 ~vav~lSngsv~lyd~~t------------g~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~ 109 (376)
T KOG1188|consen 42 AVAVSLSNGSVRLYDKGT------------GQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESAR 109 (376)
T ss_pred eEEEEecCCeEEEEeccc------------hhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhh
Confidence 589999999999999887 45677788999999999997 67899999999999999998766554
Q ss_pred e--ccCCCCCeEEEEEeCCCCCCCCceEEEeeC----CCeEEEEECCCcce-eeee-eeccccEEEEEEecCC-CEEEEE
Q 019326 78 I--HHHESSSVTSLAFYTPQNLSVPRNLFSTSA----DGFVSIFDADPFVL-LTSV-KVHKKGVNDLAVHHSG-KLALTV 148 (343)
Q Consensus 78 ~--~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~-~~~~-~~~~~~v~~i~~~~~~-~~l~~~ 148 (343)
+ ..+...+..+++..-++ +.+++|.. +-.|.+||++..+. +..+ ..|...|+++.|+|+. ++|++|
T Consensus 110 ~~~~~~~~~~f~~ld~nck~-----~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSG 184 (376)
T KOG1188|consen 110 ISWTQQSGTPFICLDLNCKK-----NIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSG 184 (376)
T ss_pred eeccCCCCCcceEeeccCcC-----CeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEee
Confidence 4 34422467777776555 57777754 56899999987665 5554 5799999999999965 899999
Q ss_pred eCCCeEEEEEccCCc----eeEEEEcCCcceEEEEeCCC--CEEEEEeCCcEEEEEcccceeEEEecCC-----------
Q 019326 149 GRDDCLAMVNLVRGR----RSFYHKIGKEASLIKFDGSG--EKFFMVTEEKVGIHQAEDAKLLCELDGK----------- 211 (343)
Q Consensus 149 ~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~d~~~~~~~~~~~~~----------- 211 (343)
+.||-|.++|++... ....+.....|..+.|..++ +.+.........+|+++.+.....+..+
T Consensus 185 SvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~ 264 (376)
T KOG1188|consen 185 SVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKED 264 (376)
T ss_pred cccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhh
Confidence 999999999997653 23455566789999999887 5444448999999999988765555422
Q ss_pred ---cceEEeeecCCCeEEEEeC-CCcEEEEECC------CCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc
Q 019326 212 ---KRILCAAPGENGVLFTGGE-DRSITAWDTN------SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS 281 (343)
Q Consensus 212 ---~~i~~~~~~~~~~l~~~~~-dg~i~i~d~~------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 281 (343)
.-|.+....+...++.++. -|...++-+. ..+.+..+..+|...|+++.|...+. ++.||+
T Consensus 265 ~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~---------~l~TGG 335 (376)
T KOG1188|consen 265 NCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKND---------VLYTGG 335 (376)
T ss_pred hhhheeecccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccc---------eeeccC
Confidence 1133333334445544444 5666555443 23456677756888899999987776 999999
Q ss_pred CCCcEEEEecc
Q 019326 282 SDGVICVWDVR 292 (343)
Q Consensus 282 ~dg~i~vwd~~ 292 (343)
+||.+.+|...
T Consensus 336 EDG~l~~Wk~~ 346 (376)
T KOG1188|consen 336 EDGLLQAWKVE 346 (376)
T ss_pred CCceEEEEecC
Confidence 99999999974
No 140
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.94 E-value=7.9e-25 Score=175.20 Aligned_cols=229 Identities=17% Similarity=0.260 Sum_probs=176.5
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc----------ceeeeeeeccccEEEEEEecCC-CEEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF----------VLLTSVKVHKKGVNDLAVHHSG-KLALTV 148 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----------~~~~~~~~~~~~v~~i~~~~~~-~~l~~~ 148 (343)
.| .+.|+.+.+.|.. +..+++.+..+.|+|||.... .+-..+.+|...-.+++|++.. ..|+++
T Consensus 122 ~h-~gEVnRaRymPQn----p~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~ 196 (422)
T KOG0264|consen 122 NH-DGEVNRARYMPQN----PNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSG 196 (422)
T ss_pred cC-CccchhhhhCCCC----CcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeec
Confidence 35 7899999999987 578888899999999998432 2223788999878889999864 589999
Q ss_pred eCCCeEEEEEccCCce--------eEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEccc--ceeEEEec-CCcceE
Q 019326 149 GRDDCLAMVNLVRGRR--------SFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAED--AKLLCELD-GKKRIL 215 (343)
Q Consensus 149 ~~d~~i~~wd~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~--~~~~~~~~-~~~~i~ 215 (343)
+.|++|.+||+..... .....+...+..++|++....++.+ .|+.+.|||+++ .++..... |..++.
T Consensus 197 ~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn 276 (422)
T KOG0264|consen 197 SDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVN 276 (422)
T ss_pred cCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCcee
Confidence 9999999999976543 2233445778889999976655444 899999999995 44444444 889999
Q ss_pred Eeeec--CCCeEEEEeCCCcEEEEECCCC-ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 216 CAAPG--ENGVLFTGGEDRSITAWDTNSG-KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 216 ~~~~~--~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
|++|+ ++..||+|+.|++|.+||+|+. +++..+. +|...|..|.|+|.... .||+++.|+++.|||+.
T Consensus 277 ~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e-~H~dev~~V~WSPh~et--------vLASSg~D~rl~vWDls 347 (422)
T KOG0264|consen 277 CVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFE-GHEDEVFQVEWSPHNET--------VLASSGTDRRLNVWDLS 347 (422)
T ss_pred EEEeCCCCCceEEeccCCCcEEEeechhcccCceecc-CCCcceEEEEeCCCCCc--------eeEecccCCcEEEEecc
Confidence 99998 4679999999999999999986 4677888 99999999999998764 89999999999999997
Q ss_pred CccccC---------CCc-ccccccccceeEEEcCCCCce
Q 019326 293 MAIKEK---------PLP-LAEAKTNSRLTCLAGSSTKSF 322 (343)
Q Consensus 293 ~~~~~~---------~~~-~~~~~~~~~i~~~~~s~~~~~ 322 (343)
.-...+ +.. +....+...|.-++|.|+...
T Consensus 348 ~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW 387 (422)
T KOG0264|consen 348 RIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPW 387 (422)
T ss_pred ccccccChhhhccCCcceeEEecCcccccccccCCCCCCe
Confidence 653222 111 122234456777777765544
No 141
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=2.9e-24 Score=164.62 Aligned_cols=263 Identities=16% Similarity=0.207 Sum_probs=204.5
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
-||+|+.||.|.|||+.+ +.....+.+|..+|++++|+ |..|+|++.|..|.+||+..|.++..+.
T Consensus 37 ~lAvGc~nG~vvI~D~~T------------~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir 104 (405)
T KOG1273|consen 37 YLAVGCANGRVVIYDFDT------------FRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR 104 (405)
T ss_pred eeeeeccCCcEEEEEccc------------cchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE
Confidence 389999999999999988 45667778999999999999 9999999999999999999999999988
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeee--c----cccEEEEEEecCCCEEEEEeCCCe
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKV--H----KKGVNDLAVHHSGKLALTVGRDDC 153 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~----~~~v~~i~~~~~~~~l~~~~~d~~ 153 (343)
.. ++|+...|+|... +.+++.-.+..-.+-++... .+.+-. . +....+..|++.|+++++|...|.
T Consensus 105 f~--spv~~~q~hp~k~----n~~va~~~~~sp~vi~~s~~--~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGk 176 (405)
T KOG1273|consen 105 FD--SPVWGAQWHPRKR----NKCVATIMEESPVVIDFSDP--KHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGK 176 (405)
T ss_pred cc--CccceeeeccccC----CeEEEEEecCCcEEEEecCC--ceeeccCCCccccccccccccccCCCCEEEEecCcce
Confidence 65 8999999999873 55555555555566666542 222211 0 112223358889999999999999
Q ss_pred EEEEEccCCceeEEEEcC--CcceEEEEeCCCCEEEEE-eCCcEEEEEcccc-------eeE--EEec---CCcceEEee
Q 019326 154 LAMVNLVRGRRSFYHKIG--KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA-------KLL--CELD---GKKRILCAA 218 (343)
Q Consensus 154 i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~-------~~~--~~~~---~~~~i~~~~ 218 (343)
+.++|..+.+++..+... ..+..+.++..|+.+++- .|..|+.|+++.- ++. ++++ ....-.+++
T Consensus 177 llv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~cc 256 (405)
T KOG1273|consen 177 LLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCC 256 (405)
T ss_pred EEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhhee
Confidence 999999999887766654 578889999999999999 9999999998731 111 1111 344566788
Q ss_pred ec-CCCeEEEEeC-CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 219 PG-ENGVLFTGGE-DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 219 ~~-~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
|+ ++.|+++++. ...++||....|..++.+....+.....+.|+|-.. .+++- ..|.+++|.....
T Consensus 257 fs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp---------~i~si-~sg~v~iw~~~~~ 324 (405)
T KOG1273|consen 257 FSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRP---------IIASI-ASGVVYIWAVVQV 324 (405)
T ss_pred ecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeeccccccee---------eeeec-cCCceEEEEeecc
Confidence 87 5667766653 456999999999999999833347788999999986 66666 7899999998753
No 142
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=6.1e-23 Score=151.96 Aligned_cols=268 Identities=14% Similarity=0.138 Sum_probs=202.4
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCee------ee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSS------LG 76 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~------~~ 76 (343)
|++|..+|.|.++.+..-. +.+.++....++..+++|.++|+.++|...+|++|+. |.|+-|....... +.
T Consensus 25 l~agn~~G~iav~sl~sl~--s~sa~~~gk~~iv~eqahdgpiy~~~f~d~~Lls~gd-G~V~gw~W~E~~es~~~K~lw 101 (325)
T KOG0649|consen 25 LFAGNLFGDIAVLSLKSLD--SGSAEPPGKLKIVPEQAHDGPIYYLAFHDDFLLSGGD-GLVYGWEWNEEEESLATKRLW 101 (325)
T ss_pred EEEecCCCeEEEEEehhhh--ccccCCCCCcceeeccccCCCeeeeeeehhheeeccC-ceEEEeeehhhhhhccchhhh
Confidence 7899999999999987522 1112222344566668999999999999989998885 9999997754321 11
Q ss_pred Eec--cC----CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC
Q 019326 77 AIH--HH----ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR 150 (343)
Q Consensus 77 ~~~--~~----~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~ 150 (343)
+.+ -+ +-..|+++...|.. +-++.++.|+.++-||+++++...++++|++.|.++.-......+++|+.
T Consensus 102 e~~~P~~~~~~evPeINam~ldP~e-----nSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~E 176 (325)
T KOG0649|consen 102 EVKIPMQVDAVEVPEINAMWLDPSE-----NSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAE 176 (325)
T ss_pred hhcCccccCcccCCccceeEeccCC-----CcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCC
Confidence 111 11 13578999999887 56666779999999999999999999999999999998666678999999
Q ss_pred CCeEEEEEccCCceeEEEEcCCc---------ceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeecC
Q 019326 151 DDCLAMVNLVRGRRSFYHKIGKE---------ASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGE 221 (343)
Q Consensus 151 d~~i~~wd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~ 221 (343)
||++++||.++++.+........ -...++.-+...++++....+.+|.++..++...++-+.++..+.| .
T Consensus 177 DGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGgGp~lslwhLrsse~t~vfpipa~v~~v~F-~ 255 (325)
T KOG0649|consen 177 DGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGGGPKLSLWHLRSSESTCVFPIPARVHLVDF-V 255 (325)
T ss_pred CccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecCCCceeEEeccCCCceEEEecccceeEeee-e
Confidence 99999999999998776654221 1225566678899999999999999999999999999999999999 5
Q ss_pred CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 222 NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 222 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
++.+++++..+.|.-|.+. |..-...+ ......++..++...- ++|-.++....+.|+
T Consensus 256 ~d~vl~~G~g~~v~~~~l~-Gvl~a~ip-~~s~~c~s~s~~~~p~--------k~~s~ag~s~~~~i~ 313 (325)
T KOG0649|consen 256 DDCVLIGGEGNHVQSYTLN-GVLQANIP-VESTACYSASWQTSPI--------KFISIAGFSNKLHIL 313 (325)
T ss_pred cceEEEeccccceeeeeec-cEEEEecc-CCccceeeecccCCce--------EEEEecccceeeeee
Confidence 6677788888899999876 55555555 3334445554443332 256666777777776
No 143
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.93 E-value=9.4e-25 Score=168.05 Aligned_cols=296 Identities=16% Similarity=0.144 Sum_probs=210.7
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEe--cCCCCCeEEEEec------CceEEEeeCCCeEEEEEcCCCee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSY--PAHLSPITTVAVS------GTAAASGGTDDTIHLYDLSTSSS 74 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~~------~~~l~s~~~dg~i~iwd~~~~~~ 74 (343)
+++....+.+.+|+.... - ....++.+ ..|...-..++|. ..++|.|+.-|.|+|.|+.++++
T Consensus 57 vfatvG~~rvtiy~c~~d-------~--~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~ 127 (385)
T KOG1034|consen 57 VFATVGGNRVTIYECPGD-------G--GIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQC 127 (385)
T ss_pred eEEEeCCcEEEEEEECCc-------c--ceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhh
Confidence 344444468889988752 1 12223333 2477778888886 35799999999999999999999
Q ss_pred eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee---eeccccEEEEEEecCCCEEEEEeCC
Q 019326 75 LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV---KVHKKGVNDLAVHHSGKLALTVGRD 151 (343)
Q Consensus 75 ~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~i~~~~~~~~l~~~~~d 151 (343)
...+.+| ...|+.|.++|.. ++++++++.|.+|++|++++..++..+ .+|.+.|.++.|++++.++++++.|
T Consensus 128 ~~~~~gh-G~sINeik~~p~~----~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmD 202 (385)
T KOG1034|consen 128 SKNYRGH-GGSINEIKFHPDR----PQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMD 202 (385)
T ss_pred ccceecc-CccchhhhcCCCC----CcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCc
Confidence 9999999 9999999999998 689999999999999999999999887 4699999999999999999999999
Q ss_pred CeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCC
Q 019326 152 DCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGED 231 (343)
Q Consensus 152 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d 231 (343)
.+|++|++...+.....+. ...|+|++...-.- .....+.+.. ..-.|...|-|+.| -++++++=+-+
T Consensus 203 hslk~W~l~~~~f~~~lE~-----s~~~~~~~t~~pfp-t~~~~fp~fs-----t~diHrnyVDCvrw-~gd~ilSksce 270 (385)
T KOG1034|consen 203 HSLKLWRLNVKEFKNKLEL-----SITYSPNKTTRPFP-TPKTHFPDFS-----TTDIHRNYVDCVRW-FGDFILSKSCE 270 (385)
T ss_pred ceEEEEecChhHHhhhhhh-----hcccCCCCccCcCC-cccccccccc-----ccccccchHHHHHH-HhhheeecccC
Confidence 9999999985432111110 12333332210000 0000011110 11127788888888 56899999999
Q ss_pred CcEEEEECC-CCc-------------eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcccc
Q 019326 232 RSITAWDTN-SGK-------------VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKE 297 (343)
Q Consensus 232 g~i~i~d~~-~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 297 (343)
+.|..|... -.+ .+.++. .....|+-+.|.-+.- +++||.|...|.|.+||++.....
T Consensus 271 naI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~-~~~c~iWfirf~~d~~-------~~~la~gnq~g~v~vwdL~~~ep~ 342 (385)
T KOG1034|consen 271 NAIVCWKPGKLEESIHNVKPPESATTILGEFD-YPMCDIWFIRFAFDPW-------QKMLALGNQSGKVYVWDLDNNEPP 342 (385)
T ss_pred ceEEEEecchhhhhhhccCCCccceeeeeEec-cCccceEEEEEeecHH-------HHHHhhccCCCcEEEEECCCCCCc
Confidence 999999872 111 223333 3344566666554432 228999999999999999987544
Q ss_pred CCCcccccccccceeEEEcCCCCceeccccCCCCC
Q 019326 298 KPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAP 332 (343)
Q Consensus 298 ~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~ 332 (343)
....+.....+..|...+||.|+++++....++.+
T Consensus 343 ~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~V 377 (385)
T KOG1034|consen 343 KCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTV 377 (385)
T ss_pred cCceEEeccccceeeeeeecccCcEEEEEeCCCcE
Confidence 33444445556789999999999999988887754
No 144
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.93 E-value=8e-24 Score=177.74 Aligned_cols=306 Identities=17% Similarity=0.176 Sum_probs=233.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--C---ceEEEeeCCCeEEEEEcCCCe---
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--G---TAAASGGTDDTIHLYDLSTSS--- 73 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~---~~l~s~~~dg~i~iwd~~~~~--- 73 (343)
-|+.|+.+..|.++.-.. -++..+..+.||.+.|.+++|. + -+|++++.|..||||.+.-+.
T Consensus 161 lla~Ggs~~~v~~~s~~~----------d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~ 230 (764)
T KOG1063|consen 161 LLACGGSKFVVDLYSSSA----------DSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDED 230 (764)
T ss_pred EEEecCcceEEEEeccCC----------cceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCcc
Confidence 478888888888887553 2578889999999999999998 2 378999999999999875221
Q ss_pred ------------------ee----------eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCccee--
Q 019326 74 ------------------SL----------GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL-- 123 (343)
Q Consensus 74 ------------------~~----------~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-- 123 (343)
.. ..+.+| ...|+++.|+|.+ ..|++++.|.++.+|...+..-+
T Consensus 231 ~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GH-eDWV~sv~W~p~~-----~~LLSASaDksmiiW~pd~~tGiWv 304 (764)
T KOG1063|consen 231 SNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGH-EDWVYSVWWHPEG-----LDLLSASADKSMIIWKPDENTGIWV 304 (764)
T ss_pred ccccccccccccCCceeeeeeeEEEEEehhhhhcCc-ccceEEEEEccch-----hhheecccCcceEEEecCCccceEE
Confidence 11 112378 9999999999998 78999999999999988654211
Q ss_pred -----eeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc----eeEEEEcCCcceEEEEeCCCCEEEEE-eCCc
Q 019326 124 -----TSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR----RSFYHKIGKEASLIKFDGSGEKFFMV-TEEK 193 (343)
Q Consensus 124 -----~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 193 (343)
...-+....-....|+|+++.+++-+..|..++|...... ......+-..|..++|+|.|++++++ .|.+
T Consensus 305 ~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQT 384 (764)
T KOG1063|consen 305 DVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQT 384 (764)
T ss_pred EEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccc
Confidence 2222334568889999999999999999999999833321 12233344779999999999999999 8999
Q ss_pred EEEEEcc-cceeEEEec----CCcceEEeeecC-CCeEEEEeCCCcEEEEECCC--------------------------
Q 019326 194 VGIHQAE-DAKLLCELD----GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNS-------------------------- 241 (343)
Q Consensus 194 i~~~d~~-~~~~~~~~~----~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~-------------------------- 241 (343)
-++|-.- .......+. |...++|+++-+ +-.+++|.+...+|+|+...
T Consensus 385 TRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~V 464 (764)
T KOG1063|consen 385 TRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANV 464 (764)
T ss_pred eeeecccccccceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhccccccc
Confidence 9998655 222223332 778899999987 56788888889999998753
Q ss_pred -----------------Cc---------------------------------eeEEecccccccEEEEEEEecCCCCCCC
Q 019326 242 -----------------GK---------------------------------VAYCIEDAHSARVKGIVVLTKNDGGSTA 271 (343)
Q Consensus 242 -----------------~~---------------------------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 271 (343)
|. .+..+ -+|...|.+++.+|+++
T Consensus 465 paLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KL-YGHGyEv~~l~~s~~gn----- 538 (764)
T KOG1063|consen 465 PALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKL-YGHGYEVYALAISPTGN----- 538 (764)
T ss_pred ccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHh-ccCceeEEEEEecCCCC-----
Confidence 00 01122 38899999999999988
Q ss_pred CCCeEEEEEcCCC-----cEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 272 ENPYLVASASSDG-----VICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 272 ~~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
++||++... .|++|+..+....+..+ .+.-.|+.|+||||++|+.+.+.|.....++.
T Consensus 539 ----liASaCKS~~~ehAvI~lw~t~~W~~~~~L~----~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~ 601 (764)
T KOG1063|consen 539 ----LIASACKSSLKEHAVIRLWNTANWLQVQELE----GHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEV 601 (764)
T ss_pred ----EEeehhhhCCccceEEEEEeccchhhhheec----ccceEEEEEEECCCCcEEEEeecCceEEeeee
Confidence 999998653 59999999876444232 33446999999999999999999997776665
No 145
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=3.4e-24 Score=171.15 Aligned_cols=239 Identities=18% Similarity=0.202 Sum_probs=180.5
Q ss_pred eeEEeccCCeEEEEEeecCCCC-C------CCCcce--eeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEc
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHY-S------SDQKTL--TLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDL 69 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~-~------~~~~~~--~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~ 69 (343)
-+|+|+-|-.|.|||+.-.... | ...+.. ..+.-..-.+|+..|.+|+|+ .+.||+|+.|.+|++||+
T Consensus 194 yvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~ 273 (463)
T KOG0270|consen 194 YVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDV 273 (463)
T ss_pred eEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEc
Confidence 3789999999999998653211 0 000000 111122234799999999998 789999999999999999
Q ss_pred CCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCccee-eeeeeccccEEEEEEecCC-CEEEE
Q 019326 70 STSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL-TSVKVHKKGVNDLAVHHSG-KLALT 147 (343)
Q Consensus 70 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~v~~i~~~~~~-~~l~~ 147 (343)
.++++...+..| ...|.++.|+|.. +..|++|+.|++|.+.|.+..... ..++ ..+.|-.++|.|.. ..+++
T Consensus 274 ~~g~p~~s~~~~-~k~Vq~l~wh~~~----p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f~~ 347 (463)
T KOG0270|consen 274 DTGKPKSSITHH-GKKVQTLEWHPYE----PSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSFFV 347 (463)
T ss_pred CCCCcceehhhc-CCceeEEEecCCC----ceEEEeccccceEEeeeccCccccCceEE-eccceEEEEecCCCceeEEE
Confidence 999999999977 9999999999988 689999999999999999843322 2333 56789999999965 67788
Q ss_pred EeCCCeEEEEEccCC-ceeEE-EEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEecCC---cceEEeeec
Q 019326 148 VGRDDCLAMVNLVRG-RRSFY-HKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELDGK---KRILCAAPG 220 (343)
Q Consensus 148 ~~~d~~i~~wd~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~---~~i~~~~~~ 220 (343)
+..||+++-+|+|.. +++.. ..+..+|+++++++....+++. .++.+++|++..........|. +...|+++.
T Consensus 348 ~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~ 427 (463)
T KOG0270|consen 348 STDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALD 427 (463)
T ss_pred ecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccC
Confidence 889999999999986 55554 4566899999999876655444 8999999998765543333322 235555555
Q ss_pred C--CCeEEEEeCCCcEEEEECCCCceeE
Q 019326 221 E--NGVLFTGGEDRSITAWDTNSGKVAY 246 (343)
Q Consensus 221 ~--~~~l~~~~~dg~i~i~d~~~~~~~~ 246 (343)
+ ...++.|+..+.+++||+.+...+.
T Consensus 428 ~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 428 PDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred CCcceEEEecCccceEEEeecccChhHH
Confidence 3 3588889999999999998776543
No 146
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=1.2e-23 Score=161.20 Aligned_cols=235 Identities=17% Similarity=0.217 Sum_probs=180.7
Q ss_pred eEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcce
Q 019326 45 ITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL 122 (343)
Q Consensus 45 v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 122 (343)
-.|+.|+ |.+||+|+.||.|.|||+.|...-+.+.+| ..+|++++|++++ +.|++++.|..|.+||+..+.+
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH-~~pi~sl~WS~dg-----r~LltsS~D~si~lwDl~~gs~ 99 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAH-VRPITSLCWSRDG-----RKLLTSSRDWSIKLWDLLKGSP 99 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhcc-ccceeEEEecCCC-----CEeeeecCCceeEEEeccCCCc
Confidence 7899999 999999999999999999999988889999 9999999999999 8999999999999999999999
Q ss_pred eeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEEE-----cCCcceEEEEeCCCCEEEEE-eCCcEE
Q 019326 123 LTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHK-----IGKEASLIKFDGSGEKFFMV-TEEKVG 195 (343)
Q Consensus 123 ~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~i~ 195 (343)
++.++ ...+|+...|+|.. +..++.-.+..-.+.++.......... ......+..|.+.|++++++ ..|.+.
T Consensus 100 l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkll 178 (405)
T KOG1273|consen 100 LKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLL 178 (405)
T ss_pred eeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEE
Confidence 99988 68899999999965 333333344445555555433221111 11223445689999999999 999999
Q ss_pred EEEcccceeEEEecC--CcceEEeeec-CCCeEEEEeCCCcEEEEECCCC-------c--eeEEecc-cccccEEEEEEE
Q 019326 196 IHQAEDAKLLCELDG--KKRILCAAPG-ENGVLFTGGEDRSITAWDTNSG-------K--VAYCIED-AHSARVKGIVVL 262 (343)
Q Consensus 196 ~~d~~~~~~~~~~~~--~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~-------~--~~~~~~~-~h~~~v~~~~~~ 262 (343)
+|+..+.+++..++- ...|..+.++ .++.|+..+.|+.|+.|+++.- + +.+.+.+ -....=.+++|+
T Consensus 179 v~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs 258 (405)
T KOG1273|consen 179 VYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFS 258 (405)
T ss_pred EEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeec
Confidence 999999999988873 3678888887 6789999999999999998621 1 1111110 012334566777
Q ss_pred ecCCCCCCCCCCeEEEEEcC-CCcEEEEeccCcc
Q 019326 263 TKNDGGSTAENPYLVASASS-DGVICVWDVRMAI 295 (343)
Q Consensus 263 ~~~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~ 295 (343)
.++. ++++++. -..++||.-..+.
T Consensus 259 ~dge---------Yv~a~s~~aHaLYIWE~~~Gs 283 (405)
T KOG1273|consen 259 GDGE---------YVCAGSARAHALYIWEKSIGS 283 (405)
T ss_pred CCcc---------EEEeccccceeEEEEecCCcc
Confidence 7766 7776663 4679999998874
No 147
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.92 E-value=9e-23 Score=161.37 Aligned_cols=276 Identities=18% Similarity=0.174 Sum_probs=208.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcC--------C
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLS--------T 71 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~--------~ 71 (343)
+|++|+.|..|++|.++..++. +...+..-...+..|...|+++.|+ |+.||+|+.+|.|.+|... +
T Consensus 28 ~laT~G~D~~iriW~v~r~~~~---~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~ 104 (434)
T KOG1009|consen 28 KLATAGGDKDIRIWKVNRSEPG---GGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADT 104 (434)
T ss_pred ceecccCccceeeeeeeecCCC---CCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccc
Confidence 6899999999999999875443 2225667778888999999999999 8899999999999999876 2
Q ss_pred --------CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCC
Q 019326 72 --------SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGK 143 (343)
Q Consensus 72 --------~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~ 143 (343)
......+.+| ...|..++|+|++ .++++++.|+++++||+..|+....+..|...|..++|.|-++
T Consensus 105 e~~~~ke~w~v~k~lr~h-~~diydL~Ws~d~-----~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~q 178 (434)
T KOG1009|consen 105 EADLNKEKWVVKKVLRGH-RDDIYDLAWSPDS-----NFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQ 178 (434)
T ss_pred hhhhCccceEEEEEeccc-ccchhhhhccCCC-----ceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhh
Confidence 1223455677 8999999999999 8999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCeEEEEEccCCceeEEEEc------------------------CCcceEEEEeCCCCEEEEEe-----CCcE
Q 019326 144 LALTVGRDDCLAMVNLVRGRRSFYHKI------------------------GKEASLIKFDGSGEKFFMVT-----EEKV 194 (343)
Q Consensus 144 ~l~~~~~d~~i~~wd~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~-----~~~i 194 (343)
++++-+.|...+.+.+...+....... +.....++|+|+|..+++.. .+.+
T Consensus 179 yv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~ 258 (434)
T KOG1009|consen 179 YVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGV 258 (434)
T ss_pred hhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCce
Confidence 999999998777777655443322210 11234578899999988762 3333
Q ss_pred -----EEEEccc-ceeEEEecC-CcceEEeee-----------------c-CCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 195 -----GIHQAED-AKLLCELDG-KKRILCAAP-----------------G-ENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 195 -----~~~d~~~-~~~~~~~~~-~~~i~~~~~-----------------~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
++|+-.. .++...++. ..+...+.+ . +-+.+++-.....|++||.++..++....
T Consensus 259 ~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq~~~P~~~v~ 338 (434)
T KOG1009|consen 259 FRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQTLEPLAVVD 338 (434)
T ss_pred eeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceEEEeccccccceEEEe
Confidence 3333221 122222221 111111111 1 33444444456689999999999999998
Q ss_pred ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 250 DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 250 ~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+-|-..|+.++|++++. .|+..|.||...+-.++..+
T Consensus 339 nihy~~iTDiaws~dg~---------~l~vSS~DGyCS~vtfe~~e 375 (434)
T KOG1009|consen 339 NIHYSAITDIAWSDDGS---------VLLVSSTDGFCSLVTFEPWE 375 (434)
T ss_pred eeeeeeecceeecCCCc---------EEEEeccCCceEEEEEcchh
Confidence 88999999999999988 99999999998887777654
No 148
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.92 E-value=1.5e-23 Score=164.19 Aligned_cols=234 Identities=23% Similarity=0.265 Sum_probs=177.0
Q ss_pred EEeccCCeEEEEEeecCCC----CCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeee-
Q 019326 4 IAGSYEKFIWGYKLKPSNH----YSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSL- 75 (343)
Q Consensus 4 ~~g~~d~~i~vw~~~~~~~----~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~- 75 (343)
++=+..|.|+||++..... +....+.....+++++.+|...=..|+|+ ...|++|..-+.|++|...++.-.
T Consensus 169 aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~v 248 (440)
T KOG0302|consen 169 ASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKV 248 (440)
T ss_pred eeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeeccCceee
Confidence 4556789999999865221 11112335678899999999999999999 466899998999999999887532
Q ss_pred --eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc---ceeeeeeeccccEEEEEEecCCCEEEEEeC
Q 019326 76 --GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF---VLLTSVKVHKKGVNDLAVHHSGKLALTVGR 150 (343)
Q Consensus 76 --~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~ 150 (343)
..|.+| +..|-.|+|+|... ..|++|+.||+|+|||++.+ .++.+ +.|.+.|+.|.|+..-.+|++|+.
T Consensus 249 d~~Pf~gH-~~SVEDLqWSptE~----~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~sDVNVISWnr~~~lLasG~D 322 (440)
T KOG0302|consen 249 DQRPFTGH-TKSVEDLQWSPTED----GVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNSDVNVISWNRREPLLASGGD 322 (440)
T ss_pred cCcccccc-ccchhhhccCCccC----ceEEeeecCceEEEEEecCCCccceeEe-eccCCceeeEEccCCcceeeecCC
Confidence 345677 99999999999884 79999999999999999887 33433 789999999999998889999999
Q ss_pred CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec-CCcceEEeeecC--CCeEEE
Q 019326 151 DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE--NGVLFT 227 (343)
Q Consensus 151 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~--~~~l~~ 227 (343)
||+++|||++.-+. ++++..++ |..+|+++.|++ ...|++
T Consensus 323 dGt~~iwDLR~~~~-------------------------------------~~pVA~fk~Hk~pItsieW~p~e~s~iaa 365 (440)
T KOG0302|consen 323 DGTLSIWDLRQFKS-------------------------------------GQPVATFKYHKAPITSIEWHPHEDSVIAA 365 (440)
T ss_pred CceEEEEEhhhccC-------------------------------------CCcceeEEeccCCeeEEEeccccCceEEe
Confidence 99999999987542 24445555 778888888873 457888
Q ss_pred EeCCCcEEEEECCCCce-----------e----EEecccc--cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 228 GGEDRSITAWDTNSGKV-----------A----YCIEDAH--SARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 228 ~~~dg~i~i~d~~~~~~-----------~----~~~~~~h--~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
++.|..|.+||+.-..- + ..+..-| ...+..+.|++.-++ +|++.+.|| +.||
T Consensus 366 sg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG--------~lvsTa~dG-fnVf 435 (440)
T KOG0302|consen 366 SGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPG--------LLVSTAIDG-FNVF 435 (440)
T ss_pred ccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCC--------eEEEecccc-eeEE
Confidence 88888888888753110 0 0111134 346778888887654 899999998 4444
No 149
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.92 E-value=9.4e-24 Score=165.39 Aligned_cols=204 Identities=18% Similarity=0.295 Sum_probs=162.5
Q ss_pred CCCCCeEEEEec----CceEEEeeCCCeEEEEEcCC----------------CeeeeEeccCCCCCeEEEEEeCCCCCCC
Q 019326 40 AHLSPITTVAVS----GTAAASGGTDDTIHLYDLST----------------SSSLGAIHHHESSSVTSLAFYTPQNLSV 99 (343)
Q Consensus 40 ~h~~~v~~l~~~----~~~l~s~~~dg~i~iwd~~~----------------~~~~~~~~~~~~~~v~~l~~~~~~~~~~ 99 (343)
+|.+.++-+.-. ..+.++-+..|.|+||++.. .+++.++.+| ...=..|+|+|-..
T Consensus 149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~gh-k~EGy~LdWSp~~~--- 224 (440)
T KOG0302|consen 149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGH-KGEGYGLDWSPIKT--- 224 (440)
T ss_pred ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEeccc-Cccceeeecccccc---
Confidence 577777777665 34566677889999999852 3567788888 88899999999542
Q ss_pred CceEEEeeCCCeEEEEECCCcce---eeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEEEcCCcce
Q 019326 100 PRNLFSTSADGFVSIFDADPFVL---LTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHKIGKEAS 175 (343)
Q Consensus 100 ~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 175 (343)
..|++|..-+.|++|...++.- ...+.+|+..|-.++|+|.. ..|++|+-||+|+|||+|.+...
T Consensus 225 -g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~---------- 293 (440)
T KOG0302|consen 225 -GRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK---------- 293 (440)
T ss_pred -cccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcc----------
Confidence 4689999999999999877542 23456799999999999965 78999999999999999987421
Q ss_pred EEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEeCCCcEEEEECCC---CceeEEeccc
Q 019326 176 LIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNS---GKVAYCIEDA 251 (343)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~ 251 (343)
..+..-.|.+.|+.+.|+. ..+|++|+.||+++|||+++ ++++..+. .
T Consensus 294 ---------------------------~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk-~ 345 (440)
T KOG0302|consen 294 ---------------------------AAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFK-Y 345 (440)
T ss_pred ---------------------------ceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEE-e
Confidence 1111123666777788863 34899999999999999975 56888999 9
Q ss_pred ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 252 HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 252 h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
|..+|++|.|+|.... .|++++.|..|.+||+.-.
T Consensus 346 Hk~pItsieW~p~e~s--------~iaasg~D~QitiWDlsvE 380 (440)
T KOG0302|consen 346 HKAPITSIEWHPHEDS--------VIAASGEDNQITIWDLSVE 380 (440)
T ss_pred ccCCeeEEEeccccCc--------eEEeccCCCcEEEEEeecc
Confidence 9999999999998764 7899999999999999654
No 150
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=2.3e-25 Score=187.78 Aligned_cols=211 Identities=18% Similarity=0.227 Sum_probs=187.2
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
+++|+.|..+-+|.+.. ...+..+.+|..+|.|+.|+ ..+|++|+.+|+|++||++.++.++.+.+
T Consensus 43 ~~~Gg~~~k~~L~~i~k------------p~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtg 110 (825)
T KOG0267|consen 43 LVTGGEDEKVNLWAIGK------------PNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTG 110 (825)
T ss_pred eccCCCceeeccccccC------------CchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhc
Confidence 56778888888888765 34555688999999999999 67889999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
| ...+..+.|+|-+ .++++|+.|+.+.+||.+..-+...+.+|...|..+.|+|+|++++.++.|.++++||+.
T Consensus 111 h-~~~~~sv~f~P~~-----~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~ 184 (825)
T KOG0267|consen 111 H-LLNITSVDFHPYG-----EFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLT 184 (825)
T ss_pred c-ccCcceeeeccce-----EEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccc
Confidence 9 9999999999999 899999999999999999888999999999999999999999999999999999999999
Q ss_pred CCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecCC-CeEEEEeCC
Q 019326 161 RGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGEN-GVLFTGGED 231 (343)
Q Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d 231 (343)
.|+....+. +...+..+.|+|..-.++.+ .|..+++||+++.+.+.... ....|.+..|++. ..+++|...
T Consensus 185 agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~ 259 (825)
T KOG0267|consen 185 AGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGEQI 259 (825)
T ss_pred ccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCchh
Confidence 999887776 66889999999999999999 99999999999998887776 5678999999854 455555443
No 151
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.92 E-value=1.1e-23 Score=160.00 Aligned_cols=203 Identities=19% Similarity=0.232 Sum_probs=169.7
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc------------ee---eeeeeccccEEEEEEec-CC
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV------------LL---TSVKVHKKGVNDLAVHH-SG 142 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------------~~---~~~~~~~~~v~~i~~~~-~~ 142 (343)
..| .+.|+++.+.+.. ++++++|+.||.|.+||++... ++ ..-.+|+-.|.++.|-| |.
T Consensus 40 r~H-gGsvNsL~id~te----grymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~Dt 114 (397)
T KOG4283|consen 40 RPH-GGSVNSLQIDLTE----GRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDT 114 (397)
T ss_pred ccC-CCccceeeecccc----ceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecC
Confidence 456 8999999999887 4899999999999999996432 11 11125777899999998 45
Q ss_pred CEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCC---EEEEE-eCCcEEEEEcccceeEEEec-CCcceEEe
Q 019326 143 KLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGE---KFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCA 217 (343)
Q Consensus 143 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~ 217 (343)
.++.+++.|.++++||..+.+....+..++.|..-+++|-.. +++++ .+-.|++.|+.+|.....+. |...|.++
T Consensus 115 GmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV 194 (397)
T KOG4283|consen 115 GMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAV 194 (397)
T ss_pred ceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEE
Confidence 688899999999999999999999999999999999988543 56666 78899999999999999998 88999999
Q ss_pred eecCC--CeEEEEeCCCcEEEEECCCC-ceeEEe-------------cccccccEEEEEEEecCCCCCCCCCCeEEEEEc
Q 019326 218 APGEN--GVLFTGGEDRSITAWDTNSG-KVAYCI-------------EDAHSARVKGIVVLTKNDGGSTAENPYLVASAS 281 (343)
Q Consensus 218 ~~~~~--~~l~~~~~dg~i~i~d~~~~-~~~~~~-------------~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 281 (343)
.|++. -.|++|+.||.|++||++.. -++..+ ..+|.+.|++++|..++. ++++.+
T Consensus 195 ~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~---------~l~~~g 265 (397)
T KOG4283|consen 195 EWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDAR---------YLASCG 265 (397)
T ss_pred EeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccch---------hhhhcc
Confidence 99964 37899999999999999753 122221 137888999999999988 999999
Q ss_pred CCCcEEEEeccCcc
Q 019326 282 SDGVICVWDVRMAI 295 (343)
Q Consensus 282 ~dg~i~vwd~~~~~ 295 (343)
.|.++++|+..++.
T Consensus 266 td~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 266 TDDRIRVWNMESGR 279 (397)
T ss_pred CccceEEeecccCc
Confidence 99999999999874
No 152
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.92 E-value=5e-23 Score=165.12 Aligned_cols=267 Identities=17% Similarity=0.235 Sum_probs=203.7
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeee--E
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLG--A 77 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~--~ 77 (343)
+++|..-|+|-+||+...+ .....+..+..|..+|.+|.|+ ...+++.+.||+|++-|++++.... .
T Consensus 203 va~GdK~G~VG~Wn~~~~~--------~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s 274 (498)
T KOG4328|consen 203 VAVGDKGGQVGLWNFGTQE--------KDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLS 274 (498)
T ss_pred EEEccCCCcEEEEecCCCC--------CccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhh
Confidence 6888899999999996421 1233455567899999999999 5789999999999999999774433 3
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcce-eeeeeeccccEEEEEEecCC-CEEEEEeCCCeEE
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL-LTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLA 155 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~ 155 (343)
+... ...+..+.|+... ..++.+..=|...+||.++... ...+..|...|.+++++|.. .+|++++.|++.+
T Consensus 275 ~~~d-~~~fs~~d~~~e~-----~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~k 348 (498)
T KOG4328|consen 275 LDTD-NIWFSSLDFSAES-----RSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAK 348 (498)
T ss_pred cCcc-ceeeeeccccCCC-----ccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCccee
Confidence 3334 5677888888877 6777777777999999987554 67778899999999999965 6899999999999
Q ss_pred EEEccCCce-----eEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEc----ccceeEEEecCCcc------eEEeee
Q 019326 156 MVNLVRGRR-----SFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQA----EDAKLLCELDGKKR------ILCAAP 219 (343)
Q Consensus 156 ~wd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~----~~~~~~~~~~~~~~------i~~~~~ 219 (343)
|||++.-.. +....+...|.+..|+|.+-.+++. .|+.|+|||. ....+...+.|+.. .....|
T Consensus 349 IWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W 428 (498)
T KOG4328|consen 349 IWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAW 428 (498)
T ss_pred eeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcccccccchhhee
Confidence 999986432 4455667889999999988777777 9999999998 44555666665432 234456
Q ss_pred cC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEE-EEEecCCCCCCCCCCeEEEEE-cCCCcEEEEecc
Q 019326 220 GE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGI-VVLTKNDGGSTAENPYLVASA-SSDGVICVWDVR 292 (343)
Q Consensus 220 ~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~~~~~~~~~~l~s~-~~dg~i~vwd~~ 292 (343)
.+ .+++++|-.-..|-+||-..++.+.++.......|.++ .|+|.+. .+++| +..|.|+||--+
T Consensus 429 ~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~---------~~~aG~~s~Gki~vft~k 495 (498)
T KOG4328|consen 429 DPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRD---------TLAAGGNSSGKIYVFTNK 495 (498)
T ss_pred CCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeeccccc---------ceeccCCccceEEEEecC
Confidence 64 57889999999999999998887888763444455554 6777765 35554 566888888654
No 153
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=7.9e-24 Score=173.91 Aligned_cols=248 Identities=18% Similarity=0.224 Sum_probs=190.9
Q ss_pred eeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCC--------CeeeeEeccCCCCCeEEEEEeCCCCCCCC
Q 019326 31 TLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLST--------SSSLGAIHHHESSSVTSLAFYTPQNLSVP 100 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~--------~~~~~~~~~~~~~~v~~l~~~~~~~~~~~ 100 (343)
+..+.+++..|...|+.++|. ...|++++.||.|++|+++. -+++.+|.+| .++|.|+++.+++
T Consensus 283 ~w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH-~gPVl~v~v~~n~----- 356 (577)
T KOG0642|consen 283 KWNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAH-EGPVLCVVVPSNG----- 356 (577)
T ss_pred ecceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecc-cCceEEEEecCCc-----
Confidence 355566888999999999998 78899999999999999932 2578899999 9999999999999
Q ss_pred ceEEEeeCCCeEEEEECCC----------cceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-
Q 019326 101 RNLFSTSADGFVSIFDADP----------FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK- 169 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~- 169 (343)
..+++|+.||+|+.|++.. ......+.+|.+.|+.+++++....|++++.||+++.|+...... ..+.
T Consensus 357 ~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~ 435 (577)
T KOG0642|consen 357 EHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGE 435 (577)
T ss_pred eEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCC
Confidence 8999999999999996531 134567789999999999999999999999999999999877665 1111
Q ss_pred --cCCcceEEEEeCCCCE-EEEE-eCCcEEEEEcccceeEEEecC--------CcceEEeeecC-CCeEEEEeCCCcEEE
Q 019326 170 --IGKEASLIKFDGSGEK-FFMV-TEEKVGIHQAEDAKLLCELDG--------KKRILCAAPGE-NGVLFTGGEDRSITA 236 (343)
Q Consensus 170 --~~~~~~~~~~~~~~~~-~~~~-~~~~i~~~d~~~~~~~~~~~~--------~~~i~~~~~~~-~~~l~~~~~dg~i~i 236 (343)
-.+....+.+-..... .++. .-+.-.+++......+..+.. ...+.-+..++ ..+.+++..|+.|++
T Consensus 436 ~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~ 515 (577)
T KOG0642|consen 436 PKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRF 515 (577)
T ss_pred ccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceec
Confidence 1233344444332211 1111 233333444444444444431 12345555554 568899999999999
Q ss_pred EECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 237 WDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 237 ~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+|..+++++.... +|...++++++.+++. +|++++.|+.+++|.+....
T Consensus 516 ~dn~~~~~l~s~~-a~~~svtslai~~ng~---------~l~s~s~d~sv~l~kld~k~ 564 (577)
T KOG0642|consen 516 FDNKTGKILHSMV-AHKDSVTSLAIDPNGP---------YLMSGSHDGSVRLWKLDVKT 564 (577)
T ss_pred ccccccccchhee-eccceecceeecCCCc---------eEEeecCCceeehhhccchh
Confidence 9999999999999 9999999999999998 99999999999999997653
No 154
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=2.6e-24 Score=190.21 Aligned_cols=235 Identities=21% Similarity=0.251 Sum_probs=189.3
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEe-
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAI- 78 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~- 78 (343)
|+.|+.||.|-+||.... .+......+.++..|.++|..+.|+ ++.||+|+.||.|.|||+.+.+.-..+
T Consensus 83 IaGG~edG~I~ly~p~~~------~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~ 156 (1049)
T KOG0307|consen 83 IAGGLEDGNIVLYDPASI------IANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG 156 (1049)
T ss_pred eeccccCCceEEecchhh------ccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC
Confidence 778889999999998762 1233345567778899999999999 789999999999999999975544333
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccc--cEEEEEEecCC-CEEEEEeCCC---
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKK--GVNDLAVHHSG-KLALTVGRDD--- 152 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~v~~i~~~~~~-~~l~~~~~d~--- 152 (343)
.....+.|.+++|+..-. ..|++++.+|.+.|||++..+.+..+..+.+ .+..++|+|+. ..+++++.|.
T Consensus 157 ~~~~~~eI~~lsWNrkvq----hILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~P 232 (1049)
T KOG0307|consen 157 SQAPPSEIKCLSWNRKVS----HILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAP 232 (1049)
T ss_pred CCCCcccceEeccchhhh----HHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCc
Confidence 111268899999997763 6899999999999999998888887776654 57889999986 5666666653
Q ss_pred eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec-CCcceEEeeec--CCCeEEEEe
Q 019326 153 CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD-GKKRILCAAPG--ENGVLFTGG 229 (343)
Q Consensus 153 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~--~~~~l~~~~ 229 (343)
.|.+||+|.-. ..++.+. |...|.++.|+ +..++++++
T Consensus 233 viqlWDlR~as---------------------------------------sP~k~~~~H~~GilslsWc~~D~~lllSsg 273 (1049)
T KOG0307|consen 233 VIQLWDLRFAS---------------------------------------SPLKILEGHQRGILSLSWCPQDPRLLLSSG 273 (1049)
T ss_pred eeEeecccccC---------------------------------------CchhhhcccccceeeeccCCCCchhhhccc
Confidence 46777766432 3344443 77889999998 457999999
Q ss_pred CCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 230 EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 230 ~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
.|+.|.+|+.++++.+..+. .....+..+.|+|.... .++.++.||.|.|+.+....
T Consensus 274 kD~~ii~wN~~tgEvl~~~p-~~~nW~fdv~w~pr~P~--------~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 274 KDNRIICWNPNTGEVLGELP-AQGNWCFDVQWCPRNPS--------VMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred CCCCeeEecCCCceEeeecC-CCCcceeeeeecCCCcc--------hhhhheeccceeeeeeecCC
Confidence 99999999999999999999 78899999999998764 79999999999999998764
No 155
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.91 E-value=1.3e-22 Score=164.58 Aligned_cols=245 Identities=17% Similarity=0.159 Sum_probs=195.8
Q ss_pred EEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccC
Q 019326 4 IAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHH 81 (343)
Q Consensus 4 ~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 81 (343)
+.-+.|..|++|.-.. +..+...+....+. .-.|++.. ..++++|+..+.|+|||++...+.+.++.|
T Consensus 51 as~~gdk~~~~~~K~g--------~~~~Vp~~~k~~gd--~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh 120 (673)
T KOG4378|consen 51 ASMAGDKVMRIKEKDG--------KTPEVPRVRKLTGD--NAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDH 120 (673)
T ss_pred eecCCceeEEEecccC--------CCCccceeeccccc--hHHHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCC
Confidence 3445677888887654 22222233333332 34455444 689999999999999999977777888889
Q ss_pred CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccc-cEEEEEEecCCC-EEEEEeCCCeEEEEEc
Q 019326 82 ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKK-GVNDLAVHHSGK-LALTVGRDDCLAMVNL 159 (343)
Q Consensus 82 ~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~i~~~~~~~-~l~~~~~d~~i~~wd~ 159 (343)
...|+++.++... .+|++++..|.|.|..+.++.....|....+ .|.-+.|+|..+ +|.+++.+|.|.+||+
T Consensus 121 -~stvt~v~YN~~D-----eyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv 194 (673)
T KOG4378|consen 121 -QSTVTYVDYNNTD-----EYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDV 194 (673)
T ss_pred -cceeEEEEecCCc-----ceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEec
Confidence 8999999999888 8999999999999999999887777774433 566899999764 5667889999999999
Q ss_pred cCCceeEEE--EcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEeCCCcE
Q 019326 160 VRGRRSFYH--KIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGGEDRSI 234 (343)
Q Consensus 160 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i 234 (343)
....+.... .+..+...++|+|....+++. .|..|.+||.+..+....+....+...++|.+ +.+|++|...|.|
T Consensus 195 ~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG~s~G~~ 274 (673)
T KOG4378|consen 195 QGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAGNSKGEL 274 (673)
T ss_pred cCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCCcceeeecCCceEEEeecCCceE
Confidence 877665543 345677789999988776665 89999999999998888888889999999994 6789999999999
Q ss_pred EEEECCCC-ceeEEecccccccEEEEEEEecC
Q 019326 235 TAWDTNSG-KVAYCIEDAHSARVKGIVVLTKN 265 (343)
Q Consensus 235 ~i~d~~~~-~~~~~~~~~h~~~v~~~~~~~~~ 265 (343)
..||++.. .++..+. +|...|++++|-+..
T Consensus 275 i~YD~R~~k~Pv~v~s-ah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 275 IAYDMRSTKAPVAVRS-AHDASVTRVAFQPSP 305 (673)
T ss_pred EEEecccCCCCceEee-ecccceeEEEeeecc
Confidence 99999865 4667777 999999999998874
No 156
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.91 E-value=4.3e-23 Score=154.44 Aligned_cols=243 Identities=17% Similarity=0.196 Sum_probs=185.0
Q ss_pred EEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCe
Q 019326 33 TQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF 111 (343)
Q Consensus 33 ~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 111 (343)
.+.+.+++|.+.|+++.|. .++|++|..-|.|++|++++.+....+..++...|+.+...|++ .+.+-+.|+.
T Consensus 5 dP~fvLRp~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d------~l~tqgRd~~ 78 (323)
T KOG0322|consen 5 DPFFVLRPHSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPND------SLDTQGRDPL 78 (323)
T ss_pred CCeeEeccccchheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCCc------chhhcCCCce
Confidence 4667888999999999999 88899999999999999999999888885558899999999876 7899999999
Q ss_pred EEEEECCCccee-------------------------eeee----------------------------eccccEEEEEE
Q 019326 112 VSIFDADPFVLL-------------------------TSVK----------------------------VHKKGVNDLAV 138 (343)
Q Consensus 112 i~iwd~~~~~~~-------------------------~~~~----------------------------~~~~~v~~i~~ 138 (343)
+.+|++.....+ +.+. +..+.+.+..+
T Consensus 79 L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~ 158 (323)
T KOG0322|consen 79 LILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDK 158 (323)
T ss_pred EEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeec
Confidence 999997531100 0000 01134455543
Q ss_pred ecC-C--CEEEEEeCCCeEEEEEccCCceeEE-----------EEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccce
Q 019326 139 HHS-G--KLALTVGRDDCLAMVNLVRGRRSFY-----------HKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAK 203 (343)
Q Consensus 139 ~~~-~--~~l~~~~~d~~i~~wd~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~ 203 (343)
..+ + -++++|.++|.+.+||+.++..+.. ..+..++..+.+.+....=+.+ .+..+..|++....
T Consensus 159 ~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~ 238 (323)
T KOG0322|consen 159 DHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHST 238 (323)
T ss_pred cccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeecccc
Confidence 322 2 3567788899999999999744332 2345678888887765554555 67778888876532
Q ss_pred eE----EEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEE
Q 019326 204 LL----CELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLV 277 (343)
Q Consensus 204 ~~----~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l 277 (343)
.. ..+. .+..+..+.+- +++.+++++.|+.||+|+.++..++..+. .|...|++++|+|+.+ ++
T Consensus 239 gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLk-yHsagvn~vAfspd~~---------lm 308 (323)
T KOG0322|consen 239 GSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLK-YHSAGVNAVAFSPDCE---------LM 308 (323)
T ss_pred CcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhh-hhhcceeEEEeCCCCc---------hh
Confidence 11 1111 23335555555 67899999999999999999999999999 9999999999999976 99
Q ss_pred EEEcCCCcEEEEec
Q 019326 278 ASASSDGVICVWDV 291 (343)
Q Consensus 278 ~s~~~dg~i~vwd~ 291 (343)
|++|.|++|.+|++
T Consensus 309 AaaskD~rISLWkL 322 (323)
T KOG0322|consen 309 AAASKDARISLWKL 322 (323)
T ss_pred hhccCCceEEeeec
Confidence 99999999999987
No 157
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.91 E-value=3.3e-22 Score=166.68 Aligned_cols=263 Identities=14% Similarity=0.094 Sum_probs=183.7
Q ss_pred CCCCCeEE--EEec-----CceEEEeeCCCeEEEEEcCCCee------eeEeccCCCCCeEEEEEeCCCCCCCCceEEEe
Q 019326 40 AHLSPITT--VAVS-----GTAAASGGTDDTIHLYDLSTSSS------LGAIHHHESSSVTSLAFYTPQNLSVPRNLFST 106 (343)
Q Consensus 40 ~h~~~v~~--l~~~-----~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~ 106 (343)
.|.-++.- ..|+ ...|+.+..||.|.++|...... +..+..| ...|..+.|.|.. ..|+++
T Consensus 45 ~~~~p~pPf~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH-~nAifDl~wapge-----~~lVsa 118 (720)
T KOG0321|consen 45 NDGLPVPPFADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAH-KNAIFDLKWAPGE-----SLLVSA 118 (720)
T ss_pred cCCCCCCCccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccc-cceeEeeccCCCc-----eeEEEc
Confidence 34444444 4555 46899999999999999876432 3455678 8999999999955 799999
Q ss_pred eCCCeEEEEECCCcceeee--eeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeE-----------------
Q 019326 107 SADGFVSIFDADPFVLLTS--VKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSF----------------- 166 (343)
Q Consensus 107 ~~dg~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~----------------- 166 (343)
+.|.++++||+++.+++.. +.+|.+.|.+++|.|.. ..|++|+.||.|.|||++....-.
T Consensus 119 sGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~pt 198 (720)
T KOG0321|consen 119 SGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPT 198 (720)
T ss_pred cCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCC
Confidence 9999999999999888877 88999999999999965 688999999999999997543000
Q ss_pred -----E------EEcCCcceE---EEEeCCCCEEEEE--eCCcEEEEEcccceeEEEec---------C---CcceEEee
Q 019326 167 -----Y------HKIGKEASL---IKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELD---------G---KKRILCAA 218 (343)
Q Consensus 167 -----~------~~~~~~~~~---~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~---------~---~~~i~~~~ 218 (343)
. ......+.. +.+..|...|+++ .|+.|++||++......... + ...+.++.
T Consensus 199 pskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~ 278 (720)
T KOG0321|consen 199 PSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLI 278 (720)
T ss_pred CCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEE
Confidence 0 000112233 5556677888888 59999999999765443322 2 23466676
Q ss_pred ec-CCCeEEEEeCCCcEEEEECCCCc--eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 219 PG-ENGVLFTGGEDRSITAWDTNSGK--VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 219 ~~-~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
.. .|.+|++.+.|+.|++|++.+-. ++..+. ++.. ..+..-. .+++++.++++|+.|...++|.+.+..
T Consensus 279 lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~s-g~~~--~sf~vks-----~lSpd~~~l~SgSsd~~ayiw~vs~~e 350 (720)
T KOG0321|consen 279 LDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFS-GKLN--SSFYVKS-----ELSPDDCSLLSGSSDEQAYIWVVSSPE 350 (720)
T ss_pred ecCCCCeEEEEecCCcEEEEeccccCcCchhhcc-Cccc--ceeeeee-----ecCCCCceEeccCCCcceeeeeecCcc
Confidence 65 46788777789999999998643 344443 3221 1111110 124555599999999999999999864
Q ss_pred ccCCCcccccccccceeEEEcCCC
Q 019326 296 KEKPLPLAEAKTNSRLTCLAGSST 319 (343)
Q Consensus 296 ~~~~~~~~~~~~~~~i~~~~~s~~ 319 (343)
.. +..-..+.-.|++++|.|.
T Consensus 351 ~~---~~~l~Ght~eVt~V~w~pS 371 (720)
T KOG0321|consen 351 AP---PALLLGHTREVTTVRWLPS 371 (720)
T ss_pred CC---hhhhhCcceEEEEEeeccc
Confidence 22 2222233345777777553
No 158
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=3.9e-21 Score=166.01 Aligned_cols=304 Identities=19% Similarity=0.258 Sum_probs=222.1
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---C--ceEEEeeCCCeEEEEEcCCCeeeeE
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---G--TAAASGGTDDTIHLYDLSTSSSLGA 77 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~--~~l~s~~~dg~i~iwd~~~~~~~~~ 77 (343)
.+.+..+..|.||...+ ..++..+.+|..+++.+.+. . .++++++.||.|++||...+.++..
T Consensus 30 ~l~~~~~~~V~VyS~~T------------g~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt 97 (792)
T KOG1963|consen 30 FLFLCTGNFVKVYSTAT------------GECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKT 97 (792)
T ss_pred EEEEeeCCEEEEEecch------------HhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEE
Confidence 34566678999999988 45566888999999999997 2 5788999999999999761100000
Q ss_pred --------------------------------------------------------------------------------
Q 019326 78 -------------------------------------------------------------------------------- 77 (343)
Q Consensus 78 -------------------------------------------------------------------------------- 77 (343)
T Consensus 98 ~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i 177 (792)
T KOG1963|consen 98 FDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGI 177 (792)
T ss_pred EecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEE
Confidence
Q ss_pred ----------------------eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC----cceeeeeeeccc
Q 019326 78 ----------------------IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP----FVLLTSVKVHKK 131 (343)
Q Consensus 78 ----------------------~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~ 131 (343)
...||.-.+++.+++|++ +++++|..||.|.+|.--. ......+.-|..
T Consensus 178 ~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~-----~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~ 252 (792)
T KOG1963|consen 178 VHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNE-----RYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHD 252 (792)
T ss_pred EEeeeEEEEEecccceeeccchhhhhhcccceeEEecccc-----ceEEEeccCCcEEEEeccccccccccceEEEeccc
Confidence 011224457889999998 8999999999999997422 234566778999
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecC
Q 019326 132 GVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG 210 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~ 210 (343)
.|.+++|+++|.+|++|+.++.+.+|.+.++++.....++.++..+.++|++...+.. .|+.|.+....+......+.+
T Consensus 253 ~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsg 332 (792)
T KOG1963|consen 253 EVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISG 332 (792)
T ss_pred ccceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccC
Confidence 9999999999999999999999999999999988888999999999999999999888 999999998866655544442
Q ss_pred Cc------------ceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEec----------------------------
Q 019326 211 KK------------RILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIE---------------------------- 249 (343)
Q Consensus 211 ~~------------~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------------------------- 249 (343)
-. -.+.+++++ .+.++-.+..|.|.+||+.+.+.+..+.
T Consensus 333 i~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~ 412 (792)
T KOG1963|consen 333 IKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSW 412 (792)
T ss_pred ccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceE
Confidence 21 233445544 4566667777788888776533222221
Q ss_pred ---------------------------------------ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 250 ---------------------------------------DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 250 ---------------------------------------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
.+|...+...++.+.... ..+++++.||.++||-
T Consensus 413 maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs-------~~~vta~~dg~~KiW~ 485 (792)
T KOG1963|consen 413 MATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRS-------VRCVTASVDGDFKIWV 485 (792)
T ss_pred EEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCccc-------ceeEEeccCCeEEEEE
Confidence 345555555555444332 2799999999999999
Q ss_pred ccCccccCCC------cccccccccceeEEEcCCCCceeccccCCC
Q 019326 291 VRMAIKEKPL------PLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 291 ~~~~~~~~~~------~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
+...+...+. ......+..++++++|+.||.+++.+.++-
T Consensus 486 ~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s~~~~ 531 (792)
T KOG1963|consen 486 FTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVSFDDT 531 (792)
T ss_pred EecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEEecCCE
Confidence 9544221111 111112567899999999999998887765
No 159
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=3.8e-21 Score=147.12 Aligned_cols=226 Identities=18% Similarity=0.194 Sum_probs=169.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec----CceEEEeeCCCeEEEEEcCC------
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS----GTAAASGGTDDTIHLYDLST------ 71 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~l~s~~~dg~i~iwd~~~------ 71 (343)
|+++++.|+.|+|||... ...+.......+.|.+.|..+.|. |+.+|+++.|+++.||.-..
T Consensus 27 RmAtCSsDq~vkI~d~~~--------~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~ 98 (361)
T KOG2445|consen 27 RMATCSSDQTVKIWDSTS--------DSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAH 98 (361)
T ss_pred eeeeccCCCcEEEEeccC--------CCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccc
Confidence 789999999999999754 233456667778999999999997 89999999999999997631
Q ss_pred ---CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC------Ccceeeeee-------eccccEEE
Q 019326 72 ---SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD------PFVLLTSVK-------VHKKGVND 135 (343)
Q Consensus 72 ---~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~------~~~~~~~~~-------~~~~~v~~ 135 (343)
......+... ...|+.+.|.|... +-.+++++.||+++||+.. ...+..+++ .+..+..|
T Consensus 99 ~~~Wv~~ttl~Ds-rssV~DV~FaP~hl---GLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~C 174 (361)
T KOG2445|consen 99 GRRWVRRTTLVDS-RSSVTDVKFAPKHL---GLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFC 174 (361)
T ss_pred cceeEEEEEeecC-CcceeEEEecchhc---ceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceE
Confidence 1233455556 78999999999752 3689999999999999863 333444444 35567889
Q ss_pred EEEecCC---CEEEEEeCC-----CeEEEEEccCCce--eE---EEEcCCcceEEEEeCCC----CEEEEE-eCCcEEEE
Q 019326 136 LAVHHSG---KLALTVGRD-----DCLAMVNLVRGRR--SF---YHKIGKEASLIKFDGSG----EKFFMV-TEEKVGIH 197 (343)
Q Consensus 136 i~~~~~~---~~l~~~~~d-----~~i~~wd~~~~~~--~~---~~~~~~~~~~~~~~~~~----~~~~~~-~~~~i~~~ 197 (343)
+.|+|.. .+|++|+.+ +.++||....+.. .. ...+..+|..++|.|+- ..++++ .|| |+||
T Consensus 175 vsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~ 253 (361)
T KOG2445|consen 175 VSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIF 253 (361)
T ss_pred EeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEE
Confidence 9999753 567777765 4788888765431 11 22456889999999953 356666 666 9999
Q ss_pred Ecccc--------------------eeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECC
Q 019326 198 QAEDA--------------------KLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTN 240 (343)
Q Consensus 198 d~~~~--------------------~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~ 240 (343)
.+... +.+..+. |++++..+.|. .+..|.+.+.||+|++|...
T Consensus 254 ~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 254 KVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred EEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 98731 1222233 78899999998 67899999999999999764
No 160
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.90 E-value=1.1e-21 Score=162.58 Aligned_cols=256 Identities=14% Similarity=0.131 Sum_probs=195.5
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--C--ceEEEeeCCCeEEEEEcCCC------
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--G--TAAASGGTDDTIHLYDLSTS------ 72 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~--~~l~s~~~dg~i~iwd~~~~------ 72 (343)
|++|+.||+|+||.+.+ ..++.++. -.+.|.|++|+ + ..||++- ...+.+-+..-|
T Consensus 415 lasGsdDGtvriWEi~T------------gRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~-~~~~~ivnp~~G~~~e~~ 480 (733)
T KOG0650|consen 415 LASGSDDGTVRIWEIAT------------GRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAV-GECVLIVNPIFGDRLEVG 480 (733)
T ss_pred eeecCCCCcEEEEEeec------------ceEEEEEe-ecceeEEEEecCCCCceeEEEEe-cCceEEeCccccchhhhc
Confidence 78999999999999998 45555543 35689999998 2 2344333 333444432211
Q ss_pred -------------------------------eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC---CeEEEEECC
Q 019326 73 -------------------------------SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD---GFVSIFDAD 118 (343)
Q Consensus 73 -------------------------------~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d---g~i~iwd~~ 118 (343)
+-++..-.| ...|..+.|+..| .+|++...+ ..|.|.++.
T Consensus 481 ~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~-~k~i~~vtWHrkG-----DYlatV~~~~~~~~VliHQLS 554 (733)
T KOG0650|consen 481 PTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKH-PKSIRQVTWHRKG-----DYLATVMPDSGNKSVLIHQLS 554 (733)
T ss_pred chhhhhhcCCCccCCcccceeechhhhhhhccceEEEEec-CCccceeeeecCC-----ceEEEeccCCCcceEEEEecc
Confidence 011222345 6889999999999 899988774 478999998
Q ss_pred CcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE-EcCCcceEEEEeCCCCEEEEE-eCCcEEE
Q 019326 119 PFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH-KIGKEASLIKFDGSGEKFFMV-TEEKVGI 196 (343)
Q Consensus 119 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ 196 (343)
..+....|+-..+.|.++.|+|...+|++++. ..|++||+..+..+... .....+..++.+|.|..++++ .++.+..
T Consensus 555 K~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~W 633 (733)
T KOG0650|consen 555 KRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCW 633 (733)
T ss_pred cccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEE
Confidence 77766777667788999999999988888775 57999999876654433 334678899999999999999 9999999
Q ss_pred EEcccc-eeEEEec-CCcceEEeeecCC-CeEEEEeCCCcEEEEECC------CC---ceeEEeccccccc----EEEEE
Q 019326 197 HQAEDA-KLLCELD-GKKRILCAAPGEN-GVLFTGGEDRSITAWDTN------SG---KVAYCIEDAHSAR----VKGIV 260 (343)
Q Consensus 197 ~d~~~~-~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~dg~i~i~d~~------~~---~~~~~~~~~h~~~----v~~~~ 260 (343)
||+.-+ ++.+++. |...+++++++.. .++++|+.||++.||.-. .. -++..+. +|... |....
T Consensus 634 fDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~-gH~~~~~~gVLd~~ 712 (733)
T KOG0650|consen 634 FDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLR-GHEKTNDLGVLDTI 712 (733)
T ss_pred EEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeecc-CceeecccceEeec
Confidence 999854 5666666 7788999999854 689999999999998532 11 2566777 88766 89999
Q ss_pred EEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 261 VLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
|+|... +|++++.||+|++|
T Consensus 713 wHP~qp---------WLfsAGAd~tirlf 732 (733)
T KOG0650|consen 713 WHPRQP---------WLFSAGADGTIRLF 732 (733)
T ss_pred ccCCCc---------eEEecCCCceEEee
Confidence 999998 99999999999998
No 161
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.89 E-value=3.8e-21 Score=146.07 Aligned_cols=267 Identities=18% Similarity=0.236 Sum_probs=191.7
Q ss_pred eeEEecc----CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-------CceEEEeeCCCeEEEEEcC
Q 019326 2 SLIAGSY----EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-------GTAAASGGTDDTIHLYDLS 70 (343)
Q Consensus 2 ~l~~g~~----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-------~~~l~s~~~dg~i~iwd~~ 70 (343)
+|+.|+. .+.|.|..+... ..+.....++ .|.-+++.+-|. .++|||.+ ..+|+|.+.
T Consensus 61 rla~gS~~Ee~~Nkvqiv~ld~~--------s~e~~~~a~f-d~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~ 129 (364)
T KOG0290|consen 61 RLAVGSFIEEYNNKVQIVQLDED--------SGELVEDANF-DHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIG 129 (364)
T ss_pred eEEEeeeccccCCeeEEEEEccC--------CCceeccCCC-CCCCCccceEecCCccccCcchhhccc--CeEEEEecc
Confidence 5677763 567777776531 1222222232 589999999997 34566655 469999987
Q ss_pred CCee----eeEe----ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc---eeeeeeeccccEEEEEEe
Q 019326 71 TSSS----LGAI----HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV---LLTSVKVHKKGVNDLAVH 139 (343)
Q Consensus 71 ~~~~----~~~~----~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~i~~~ 139 (343)
..+. ...+ ..+...++++..|+.-. ++++.+.+-|-+..|||++++. ...++-.|...|..|+|.
T Consensus 130 ~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~d----p~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~ 205 (364)
T KOG0290|consen 130 DEESRVELQSVLNNNKNSEFCAPLTSFDWNEVD----PNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFL 205 (364)
T ss_pred CcCCceehhhhhccCcccccCCcccccccccCC----cceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEec
Confidence 4211 1111 12226789999998776 6899999999999999998763 366777899999999999
Q ss_pred cCC-CEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEee
Q 019326 140 HSG-KLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAA 218 (343)
Q Consensus 140 ~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~ 218 (343)
..+ +.+++++.||.+++||++..+.... +|.-.. ...+...++
T Consensus 206 ~~s~~~FASvgaDGSvRmFDLR~leHSTI----------------------------IYE~p~--------~~~pLlRLs 249 (364)
T KOG0290|consen 206 KGSRDVFASVGADGSVRMFDLRSLEHSTI----------------------------IYEDPS--------PSTPLLRLS 249 (364)
T ss_pred cCccceEEEecCCCcEEEEEecccccceE----------------------------EecCCC--------CCCcceeec
Confidence 865 6899999999999999987653211 111000 134566667
Q ss_pred ec--CCCeEEEEeC-CCcEEEEECCCC-ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 219 PG--ENGVLFTGGE-DRSITAWDTNSG-KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 219 ~~--~~~~l~~~~~-dg~i~i~d~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
|+ +.+++++-.. ...|.|.|++.. .++.++. +|.+.|++++|.|.... .|+|++.|..+.+||+...
T Consensus 250 wnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~-~H~a~VNgIaWaPhS~~--------hictaGDD~qaliWDl~q~ 320 (364)
T KOG0290|consen 250 WNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLR-NHQASVNGIAWAPHSSS--------HICTAGDDCQALIWDLQQM 320 (364)
T ss_pred cCcCCchHHhhhhcCCceEEEEEecCCCcceehhh-cCcccccceEecCCCCc--------eeeecCCcceEEEEecccc
Confidence 76 3467776554 456999999865 5778888 99999999999998764 8999999999999999876
Q ss_pred cc-cCCCcccccccccceeEEEcCCC-CceeccccC
Q 019326 295 IK-EKPLPLAEAKTNSRLTCLAGSST-KSFKRPQIG 328 (343)
Q Consensus 295 ~~-~~~~~~~~~~~~~~i~~~~~s~~-~~~~~~~~~ 328 (343)
.. ...-|+..+...+.|+.+.|++. ...++...+
T Consensus 321 ~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~~ 356 (364)
T KOG0290|consen 321 PRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICFG 356 (364)
T ss_pred cccCCCCchhhhhccceeeeeeecccCCCEEEEEec
Confidence 54 34446666777888999999954 445544443
No 162
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.89 E-value=4.1e-21 Score=151.61 Aligned_cols=201 Identities=19% Similarity=0.294 Sum_probs=165.3
Q ss_pred ecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCC-------eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee
Q 019326 38 YPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTS-------SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS 107 (343)
Q Consensus 38 ~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~ 107 (343)
+.||+++|..++|+ .+.+|+|+.|.+|.||.+..+ +.+..+.+| ...|..++|+|.. .+.|++++
T Consensus 77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH-~rrVg~V~wHPtA----~NVLlsag 151 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGH-QRRVGLVQWHPTA----PNVLLSAG 151 (472)
T ss_pred ccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeec-ceeEEEEeecccc----hhhHhhcc
Confidence 45899999999998 788999999999999998754 456778899 9999999999987 48999999
Q ss_pred CCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc--CCcceEEEEeCCCCE
Q 019326 108 ADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI--GKEASLIKFDGSGEK 185 (343)
Q Consensus 108 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 185 (343)
.|.+|.+||+.+++.+.++. |...|.++.|+.+|.+|++.+.|..|++||.++++.+..... +.....+.|-.++..
T Consensus 152 ~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i 230 (472)
T KOG0303|consen 152 SDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKI 230 (472)
T ss_pred CCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCce
Confidence 99999999999999988888 999999999999999999999999999999999998776522 244566778888886
Q ss_pred EEEE----eCCcEEEEEcccce---eEEEecCCcceEEeeecCC-Ce-EEEEeCCCcEEEEECCCCce
Q 019326 186 FFMV----TEEKVGIHQAEDAK---LLCELDGKKRILCAAPGEN-GV-LFTGGEDRSITAWDTNSGKV 244 (343)
Q Consensus 186 ~~~~----~~~~i~~~d~~~~~---~~~~~~~~~~i~~~~~~~~-~~-l~~~~~dg~i~i~d~~~~~~ 244 (343)
+.++ ++.++.+||..+-+ ....+.....|.-=.+.++ +. .++|-.|+.|+.|.+.+..+
T Consensus 231 ~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P 298 (472)
T KOG0303|consen 231 FTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPP 298 (472)
T ss_pred eeeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCc
Confidence 6666 57889999877644 3445555555555555533 44 45667799999999886553
No 163
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.89 E-value=2.3e-21 Score=161.94 Aligned_cols=119 Identities=16% Similarity=0.130 Sum_probs=97.7
Q ss_pred CCcceEEeeec--CCCeEEEEeCCCcEEEEECCCC-------ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEE
Q 019326 210 GKKRILCAAPG--ENGVLFTGGEDRSITAWDTNSG-------KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASA 280 (343)
Q Consensus 210 ~~~~i~~~~~~--~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 280 (343)
....|+.+.|. +...|+++++||.|++|.+..+ ++...+. +|...|+++.|+|-..+ .|+++
T Consensus 626 Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt-~h~eKI~slRfHPLAad--------vLa~a 696 (1012)
T KOG1445|consen 626 NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILT-IHGEKITSLRFHPLAAD--------VLAVA 696 (1012)
T ss_pred cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeee-cccceEEEEEecchhhh--------Hhhhh
Confidence 34567888887 5679999999999999998653 3556677 99999999999998654 89999
Q ss_pred cCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccccCcc
Q 019326 281 SSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKASME 341 (343)
Q Consensus 281 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 341 (343)
+.|-+|++||+.+.+.. ..-..+.+.|..++|||+|+.++....|+++++.+..+.|
T Consensus 697 syd~Ti~lWDl~~~~~~----~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e 753 (1012)
T KOG1445|consen 697 SYDSTIELWDLANAKLY----SRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSRE 753 (1012)
T ss_pred hccceeeeeehhhhhhh----heeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCC
Confidence 99999999999987422 2223556679999999999999999999999888776655
No 164
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.88 E-value=2.4e-20 Score=143.79 Aligned_cols=281 Identities=17% Similarity=0.213 Sum_probs=199.8
Q ss_pred eEEEEec--CceEEEeeCCCeEEEEEcCCC------------eeeeEeccCCCCCeEEEEEeCCCCC--CCCceEEEeeC
Q 019326 45 ITTVAVS--GTAAASGGTDDTIHLYDLSTS------------SSLGAIHHHESSSVTSLAFYTPQNL--SVPRNLFSTSA 108 (343)
Q Consensus 45 v~~l~~~--~~~l~s~~~dg~i~iwd~~~~------------~~~~~~~~~~~~~v~~l~~~~~~~~--~~~~~l~s~~~ 108 (343)
...+.|+ |..|++-+.|..+++|++... +....++-.+...|...+|-+.-++ ....++++.+.
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 4466788 889999999999999998531 1111222222466777787743322 12268999999
Q ss_pred CCeEEEEECCCcceeeeeee--ccc---cEEEEEEecCCCEEEEEeCCCeEEEEEc-cCCceeE--------EEEcCCcc
Q 019326 109 DGFVSIFDADPFVLLTSVKV--HKK---GVNDLAVHHSGKLALTVGRDDCLAMVNL-VRGRRSF--------YHKIGKEA 174 (343)
Q Consensus 109 dg~i~iwd~~~~~~~~~~~~--~~~---~v~~i~~~~~~~~l~~~~~d~~i~~wd~-~~~~~~~--------~~~~~~~~ 174 (343)
+.-|++||.-+++....+++ |.. ...+++|+|||..|++|. ...|+++|+ +.|+.-. .+...+-+
T Consensus 132 ~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~gii 210 (406)
T KOG2919|consen 132 DQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGII 210 (406)
T ss_pred cCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhccccccccee
Confidence 99999999999998888764 322 456899999999988764 578999999 6665221 11224567
Q ss_pred eEEEEeCCCC-EEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeC-CCcEEEEECCCC-ceeEEe
Q 019326 175 SLIKFDGSGE-KFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGE-DRSITAWDTNSG-KVAYCI 248 (343)
Q Consensus 175 ~~~~~~~~~~-~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~-dg~i~i~d~~~~-~~~~~~ 248 (343)
.+++|+|... .++++ ....+-||.-..+.++..+. |.+.|+.++|. +++.|++|+. |-.|..||++.. .++..+
T Consensus 211 sc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L 290 (406)
T KOG2919|consen 211 SCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYAL 290 (406)
T ss_pred eeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhh
Confidence 8899999766 66666 77888899888888888776 88999999999 6788888876 778999999864 567777
Q ss_pred cccccc-cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceecccc
Q 019326 249 EDAHSA-RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQI 327 (343)
Q Consensus 249 ~~~h~~-~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~ 327 (343)
. .|.. .-..|.|.-+.. +++|++|+.||.|++||++.... + +.........++.+++.|--.+++...
T Consensus 291 ~-rhv~~TNQRI~FDld~~-------~~~LasG~tdG~V~vwdlk~~gn--~-~sv~~~~sd~vNgvslnP~mpilatss 359 (406)
T KOG2919|consen 291 E-RHVGDTNQRILFDLDPK-------GEILASGDTDGSVRVWDLKDLGN--E-VSVTGNYSDTVNGVSLNPIMPILATSS 359 (406)
T ss_pred h-hhccCccceEEEecCCC-------CceeeccCCCccEEEEecCCCCC--c-ccccccccccccceecCcccceeeecc
Confidence 7 6665 444555544333 33999999999999999998422 1 111223344577778877766666666
Q ss_pred CCCCCCCccc
Q 019326 328 GDSAPKGEEK 337 (343)
Q Consensus 328 ~~~~~~~~~~ 337 (343)
+....+.+++
T Consensus 360 Gqr~f~~~~d 369 (406)
T KOG2919|consen 360 GQRIFKYPKD 369 (406)
T ss_pred CceeecCCCc
Confidence 6655544444
No 165
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.88 E-value=1.4e-20 Score=151.26 Aligned_cols=248 Identities=16% Similarity=0.165 Sum_probs=191.8
Q ss_pred eEEeEEecCCCCCeEEEEec---C-ceEEEeeCCCeEEEEEcCCC----eeeeEeccCCCCCeEEEEEeCCCCCCCCceE
Q 019326 32 LTQLFSYPAHLSPITTVAVS---G-TAAASGGTDDTIHLYDLSTS----SSLGAIHHHESSSVTSLAFYTPQNLSVPRNL 103 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~---~-~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l 103 (343)
..+....+-|..+|++++|+ . +++|+|...|+|-+||+.+. .-+..+..| ..+|.+|.|+|.. ...+
T Consensus 176 ~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~h-s~~Vs~l~F~P~n----~s~i 250 (498)
T KOG4328|consen 176 YRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPH-SGPVSGLKFSPAN----TSQI 250 (498)
T ss_pred ceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccC-CccccceEecCCC----hhhe
Confidence 34455566789999999999 3 78999999999999999633 234566778 9999999999998 4799
Q ss_pred EEeeCCCeEEEEECCCcce--eeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCcee-EE-EEcCCcceEEEE
Q 019326 104 FSTSADGFVSIFDADPFVL--LTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRS-FY-HKIGKEASLIKF 179 (343)
Q Consensus 104 ~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-~~-~~~~~~~~~~~~ 179 (343)
++.+.||+|++-|+++... +..+........++.|+.+...++.+..=|...+||++++... .. .-+...|..+++
T Consensus 251 ~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~ 330 (498)
T KOG4328|consen 251 YSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVAL 330 (498)
T ss_pred eeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeec
Confidence 9999999999999987543 3333334557788888888888888888889999999987652 22 223468999999
Q ss_pred eCCCCE-EEEE-eCCcEEEEEcccce-----eEEEecCCcceEEeeecC-CCeEEEEeCCCcEEEEEC----CCCceeEE
Q 019326 180 DGSGEK-FFMV-TEEKVGIHQAEDAK-----LLCELDGKKRILCAAPGE-NGVLFTGGEDRSITAWDT----NSGKVAYC 247 (343)
Q Consensus 180 ~~~~~~-~~~~-~~~~i~~~d~~~~~-----~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~----~~~~~~~~ 247 (343)
+|...+ ++++ .|++.+|||++.-. .+..+.|...|.+..|++ +..|++.+.|..|+|||. ....+...
T Consensus 331 NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~ 410 (498)
T KOG4328|consen 331 NPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGT 410 (498)
T ss_pred CCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccce
Confidence 997665 5555 89999999998633 255667999999999994 456999999999999998 44455555
Q ss_pred ecccccc------cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 248 IEDAHSA------RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 248 ~~~~h~~------~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+. |.. .....+|.|+.. +++.|-.-..|-|+|-..++
T Consensus 411 I~--Hn~~t~RwlT~fKA~W~P~~~---------li~vg~~~r~IDv~~~~~~q 453 (498)
T KOG4328|consen 411 IP--HNNRTGRWLTPFKAAWDPDYN---------LIVVGRYPRPIDVFDGNGGQ 453 (498)
T ss_pred ee--ccCcccccccchhheeCCCcc---------EEEEeccCcceeEEcCCCCE
Confidence 55 332 223445777665 99999999999999998764
No 166
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=2.4e-20 Score=143.52 Aligned_cols=223 Identities=19% Similarity=0.178 Sum_probs=172.2
Q ss_pred EeccCCeEEEEEeecCCCCCCCCcceeeEEeE---EecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 5 AGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLF---SYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 5 ~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~---~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
+.-....+++|.+...+.. +-.+...+.. --+.|.-.|..+-.. +.++++++.|..|.+|+++ |+.+..+.
T Consensus 150 ~~~~g~~l~vyk~~K~~dG---~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~id 225 (420)
T KOG2096|consen 150 SVKRGNKLCVYKLVKKTDG---SGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSID 225 (420)
T ss_pred EEccCCEEEEEEeeecccC---CCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeec
Confidence 3345568999988763321 1122222222 223466666666555 7899999999999999999 99999988
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC---CCc-----ceeeeeeeccccEEEEEEecCCCEEEEEeCC
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA---DPF-----VLLTSVKVHKKGVNDLAVHHSGKLALTVGRD 151 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~---~~~-----~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d 151 (343)
.. ...-+..+.+|+| +++++++..--|++|.+ +.| ..+.++++|...|..++|+++...+++.+.|
T Consensus 226 tn-q~~n~~aavSP~G-----RFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkD 299 (420)
T KOG2096|consen 226 TN-QSSNYDAAVSPDG-----RFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKD 299 (420)
T ss_pred cc-cccccceeeCCCC-----cEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecC
Confidence 87 7778889999999 89999999999999987 222 3456788999999999999999999999999
Q ss_pred CeEEEEEccCC----ce--------eEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec--CCcceEEe
Q 019326 152 DCLAMVNLVRG----RR--------SFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD--GKKRILCA 217 (343)
Q Consensus 152 ~~i~~wd~~~~----~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~i~~~ 217 (343)
|++++||+.-. +- ............+.++|+++.|+.+....+.+|..++++....++ |...|.++
T Consensus 300 G~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~~h~~~Is~i 379 (420)
T KOG2096|consen 300 GKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELEDIHSTTISSI 379 (420)
T ss_pred CcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHHHhhcCceeeE
Confidence 99999997532 11 111122344567999999999999999999999999998888777 88999999
Q ss_pred eecC-CCeEEEEeCCCcEEEEE
Q 019326 218 APGE-NGVLFTGGEDRSITAWD 238 (343)
Q Consensus 218 ~~~~-~~~l~~~~~dg~i~i~d 238 (343)
+|++ ++++++++ |..++++.
T Consensus 380 s~~~~g~~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 380 SYSSDGKYIATCG-DRYVRVIR 400 (420)
T ss_pred EecCCCcEEeeec-ceeeeeec
Confidence 9994 66777665 67888875
No 167
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.88 E-value=1.3e-20 Score=158.49 Aligned_cols=257 Identities=13% Similarity=0.157 Sum_probs=194.1
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
|+.+. +..+.+||... ...+.++++|++.|.|++|+ |..+|+|+.|..|.+|+.+- ...++-
T Consensus 27 L~lAA-g~rlliyD~nd------------G~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl---EG~LkY 90 (1081)
T KOG1538|consen 27 LILAA-GSRLLVYDTSD------------GTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL---EGILKY 90 (1081)
T ss_pred EEEec-CCEEEEEeCCC------------cccccccccccceEEEEEEccCCceeccCCCceeEEEecccc---cceeee
Confidence 34433 45789999987 56778899999999999999 99999999999999998543 333333
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
.|...|.|+.|+|-. ..|++++.. ..-+|..+.. .+...+ ....+.+.+|..||.+++.|-.+|+|.+-+-.
T Consensus 91 SH~D~IQCMsFNP~~-----h~LasCsLs-dFglWS~~qK-~V~K~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~ 162 (1081)
T KOG1538|consen 91 SHNDAIQCMSFNPIT-----HQLASCSLS-DFGLWSPEQK-SVSKHK-SSSRIICCSWTNDGQYLALGMFNGTISIRNKN 162 (1081)
T ss_pred ccCCeeeEeecCchH-----HHhhhcchh-hccccChhhh-hHHhhh-hheeEEEeeecCCCcEEEEeccCceEEeecCC
Confidence 238999999999998 678887764 4678887653 233322 34578899999999999999999999998765
Q ss_pred CCceeEEEE---cCCcceEEEEeCCC-----CEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeC
Q 019326 161 RGRRSFYHK---IGKEASLIKFDGSG-----EKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGE 230 (343)
Q Consensus 161 ~~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~ 230 (343)
..+...... ...++..++|+|.. ..+++. ...++..|.+.....-+.-...-...|+.+. ++.+++.|+.
T Consensus 163 gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGs 242 (1081)
T KOG1538|consen 163 GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGS 242 (1081)
T ss_pred CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEEccC
Confidence 444444444 34678999999853 345555 5666666666543333233334445566655 6889999999
Q ss_pred CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 231 DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 231 dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
|+.+.+|.. .|-.+.++- .....|+.++..|+++ .++.|+.||+|--|++-..
T Consensus 243 dk~L~~fTR-~GvrLGTvg-~~D~WIWtV~~~PNsQ---------~v~~GCqDGTiACyNl~fS 295 (1081)
T KOG1538|consen 243 DKQLSLFTR-DGVRLGTVG-EQDSWIWTVQAKPNSQ---------YVVVGCQDGTIACYNLIFS 295 (1081)
T ss_pred CCceEEEee-cCeEEeecc-ccceeEEEEEEccCCc---------eEEEEEccCeeehhhhHHh
Confidence 999999964 477788877 5788999999999988 9999999999999988543
No 168
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.88 E-value=2.2e-22 Score=172.64 Aligned_cols=269 Identities=16% Similarity=0.220 Sum_probs=203.6
Q ss_pred EeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCe
Q 019326 34 QLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF 111 (343)
Q Consensus 34 ~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 111 (343)
-+..+.||..+|.|..|+ |.++++|+.|..++||..+++.++....+| .+.|+.++.+.+. .++++++.|..
T Consensus 182 ~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGh-s~ditdlavs~~n-----~~iaaaS~D~v 255 (1113)
T KOG0644|consen 182 NIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGH-SGDITDLAVSSNN-----TMIAAASNDKV 255 (1113)
T ss_pred HHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCC-ccccchhccchhh-----hhhhhcccCce
Confidence 345677999999999999 999999999999999999999999999999 9999999999887 78999999999
Q ss_pred EEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeE-----EEEcCCcceEEEEeCCCCEE
Q 019326 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF-----YHKIGKEASLIKFDGSGEKF 186 (343)
Q Consensus 112 i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 186 (343)
|++|.+..+.++..+++|++.|++|+|+|-. +.+.||++++||.+-..... .......+..+.+..++..+
T Consensus 256 IrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f 331 (1113)
T KOG0644|consen 256 IRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRF 331 (1113)
T ss_pred EEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeecccccccc
Confidence 9999999999999999999999999999964 77889999999998211111 11122445566677777777
Q ss_pred EEE-eCCcEEEEEcccceeEEEecCCcceEEeeec--CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEe
Q 019326 187 FMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPG--ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLT 263 (343)
Q Consensus 187 ~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~ 263 (343)
+++ .++.-..|....-.. +...+.-+..+ -+.+.+++-.+-.+.+|++.+|.....+. +|...+..|.++|
T Consensus 332 ~Tgs~d~ea~n~e~~~l~~-----~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~-ghsd~~yvLd~Hp 405 (1113)
T KOG0644|consen 332 LTGSRDGEARNHEFEQLAW-----RSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLM-GHSDEVYVLDVHP 405 (1113)
T ss_pred ccccCCcccccchhhHhhh-----hccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhc-ccccceeeeeecC
Confidence 777 677666665432110 11111111111 12456666677889999999999888888 9999999999999
Q ss_pred cCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 264 KNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 264 ~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
.+. ....+++.||...|||+-.+...+ ..... ...+..-+||++|..++....-+
T Consensus 406 fn~--------ri~msag~dgst~iwdi~eg~pik---~y~~g-h~kl~d~kFSqdgts~~lsd~hg 460 (1113)
T KOG0644|consen 406 FNP--------RIAMSAGYDGSTIIWDIWEGIPIK---HYFIG-HGKLVDGKFSQDGTSIALSDDHG 460 (1113)
T ss_pred CCc--------HhhhhccCCCceEeeecccCCcce---eeecc-cceeeccccCCCCceEecCCCCC
Confidence 876 256689999999999999875333 22222 34465666777766555444433
No 169
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.87 E-value=1.5e-20 Score=142.77 Aligned_cols=254 Identities=17% Similarity=0.194 Sum_probs=187.6
Q ss_pred CCCeEEEEEcCCC--eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC-------CeEEEEECCC---------cc
Q 019326 60 TDDTIHLYDLSTS--SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD-------GFVSIFDADP---------FV 121 (343)
Q Consensus 60 ~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~---------~~ 121 (343)
.|+.|.+.+++.. +.......|+.+.|..|+-+|.. ++.|+++..+ -.+.||.+.. .+
T Consensus 38 ~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d----~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE 113 (370)
T KOG1007|consen 38 EDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFD----QRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLE 113 (370)
T ss_pred CcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCC----CceEEEEEeccCCCcceeeEEEEecccccCccccchhh
Confidence 3677887776643 33333333448999999999988 3566666552 2478998843 23
Q ss_pred eeeeee-eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCcee-EEEE------cCCcceEEEEeC--CCCEEEEEeC
Q 019326 122 LLTSVK-VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRS-FYHK------IGKEASLIKFDG--SGEKFFMVTE 191 (343)
Q Consensus 122 ~~~~~~-~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~------~~~~~~~~~~~~--~~~~~~~~~~ 191 (343)
++..+. .+-+.|.|+.|.|++..+++-. |..|.+|++..+..+ .... +......-+|+| +++.+++..+
T Consensus 114 ~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d 192 (370)
T KOG1007|consen 114 CVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSD 192 (370)
T ss_pred HhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCC
Confidence 444444 3556899999999998888766 789999999887752 2222 224455677888 7889999999
Q ss_pred CcEEEEEcccceeEEEec--CCcceEEeeecCC--CeEEEEeCCCcEEEEECCCC-ceeEEecccccccEEEEEEEecCC
Q 019326 192 EKVGIHQAEDAKLLCELD--GKKRILCAAPGEN--GVLFTGGEDRSITAWDTNSG-KVAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 192 ~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~~--~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
+++..||+++.+....+. |...+..+.|.++ .+|++|++||.|++||.+.. .++.++. +|...|+++.|+|..+
T Consensus 193 ~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~-~HsHWvW~VRfn~~hd 271 (370)
T KOG1007|consen 193 STLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELP-GHSHWVWAVRFNPEHD 271 (370)
T ss_pred CcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccC-CCceEEEEEEecCccc
Confidence 999999999988888776 7788999999865 48999999999999999865 5788888 9999999999999876
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEeccCcc---------------------ccCCCc---ccc-cccccceeEEEcCCCCc
Q 019326 267 GGSTAENPYLVASASSDGVICVWDVRMAI---------------------KEKPLP---LAE-AKTNSRLTCLAGSSTKS 321 (343)
Q Consensus 267 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~---------------------~~~~~~---~~~-~~~~~~i~~~~~s~~~~ 321 (343)
++++++|.|..|.+|...+-. +.++.+ +.. -.+...|.+++||+-..
T Consensus 272 --------qLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadP 343 (370)
T KOG1007|consen 272 --------QLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADP 343 (370)
T ss_pred --------eEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCC
Confidence 389999999999999775431 111111 111 13445799999998777
Q ss_pred eecccc
Q 019326 322 FKRPQI 327 (343)
Q Consensus 322 ~~~~~~ 327 (343)
++.+..
T Consensus 344 WiFASL 349 (370)
T KOG1007|consen 344 WIFASL 349 (370)
T ss_pred eeEEEe
Confidence 665443
No 170
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=5.1e-20 Score=145.67 Aligned_cols=243 Identities=17% Similarity=0.231 Sum_probs=182.3
Q ss_pred EEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCC------CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee
Q 019326 36 FSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLST------SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS 107 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~------~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~ 107 (343)
..+.+|.+.|+++.|+ +.+|++|+.|..+++|+++. .+++.....||...|.||+|.... .++++|.
T Consensus 50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N-----~~~~SG~ 124 (609)
T KOG4227|consen 50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLEN-----RFLYSGE 124 (609)
T ss_pred hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCC-----eeEecCC
Confidence 3456899999999999 89999999999999999863 466666666657999999999887 8999999
Q ss_pred CCCeEEEEECCCcceeeeeee--ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc----eeEEEEcCCcceEEEEeC
Q 019326 108 ADGFVSIFDADPFVLLTSVKV--HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR----RSFYHKIGKEASLIKFDG 181 (343)
Q Consensus 108 ~dg~i~iwd~~~~~~~~~~~~--~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~ 181 (343)
.+++|..-|+++.+.+..+.. ..+.|..+..+|..+.|++.+.++.|.+||.+..+ .......+.....+.|+|
T Consensus 125 ~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P 204 (609)
T KOG4227|consen 125 RWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHP 204 (609)
T ss_pred CcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecC
Confidence 999999999999887777652 23489999999999999999999999999998755 222222234445555666
Q ss_pred CCCEEEEE--eCCcEEEEEccc-------------------------------------------------ce-eEEEec
Q 019326 182 SGEKFFMV--TEEKVGIHQAED-------------------------------------------------AK-LLCELD 209 (343)
Q Consensus 182 ~~~~~~~~--~~~~i~~~d~~~-------------------------------------------------~~-~~~~~~ 209 (343)
....++.. ..+.+-+||.+. .+ .+.++.
T Consensus 205 ~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D 284 (609)
T KOG4227|consen 205 ETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSD 284 (609)
T ss_pred CCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEecc
Confidence 54443333 445555555432 11 122222
Q ss_pred CC-------cceEEeeecCCCeEEEEeCCCcEEEEECCCC-----------------------ceeEEecccccccEEEE
Q 019326 210 GK-------KRILCAAPGENGVLFTGGEDRSITAWDTNSG-----------------------KVAYCIEDAHSARVKGI 259 (343)
Q Consensus 210 ~~-------~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~-----------------------~~~~~~~~~h~~~v~~~ 259 (343)
|. ..+.+++|.++.-+++|+.+-.|++|.+... +.+..+. +|...++.+
T Consensus 285 ~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLr-GHRSv~NQV 363 (609)
T KOG4227|consen 285 HNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLR-GHRSVPNQV 363 (609)
T ss_pred CCCCcceeeeeeeeeeeecceeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEe-cccccccce
Confidence 22 2355677767777999999999999987531 1334566 999999999
Q ss_pred EEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 260 VVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
.|++... +|++.+-.+.+++|.-..
T Consensus 364 RF~~H~~---------~l~SSGVE~~~KlWS~~r 388 (609)
T KOG4227|consen 364 RFSQHNN---------LLVSSGVENSFKLWSDHR 388 (609)
T ss_pred eecCCcc---------eEeccchhhheecccccc
Confidence 9999987 899999999999996543
No 171
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.87 E-value=5.7e-20 Score=141.74 Aligned_cols=272 Identities=15% Similarity=0.152 Sum_probs=195.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcce--eeEEeEEecCCCCCeEEEEec---------CceEEEeeCCCeEEEEEcC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTL--TLTQLFSYPAHLSPITTVAVS---------GTAAASGGTDDTIHLYDLS 70 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~--~~~~~~~~~~h~~~v~~l~~~---------~~~l~s~~~dg~i~iwd~~ 70 (343)
.|++-+.|+.+.+|++...........+. +..+...+. ....|...+|. .+++++.+.+.-|++||.-
T Consensus 63 ciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~-eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaf 141 (406)
T KOG2919|consen 63 CILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQ-EGETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAF 141 (406)
T ss_pred eEEeecccCeeeEEecChhhcccCCCCccccccceeEEec-cCCEEEEEEeeeccccCCCccceeeeccccCceeeeecc
Confidence 36788899999999997533221101111 222222222 23456666663 4789999999999999999
Q ss_pred CCeeeeEeccCC----CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC-CCcceeee--e-----eeccccEEEEEE
Q 019326 71 TSSSLGAIHHHE----SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA-DPFVLLTS--V-----KVHKKGVNDLAV 138 (343)
Q Consensus 71 ~~~~~~~~~~~~----~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~--~-----~~~~~~v~~i~~ 138 (343)
+|+....+.... -..-.+|+|+|++ .+|++| ....|+++|+ ++++.... . .+..+.+.+++|
T Consensus 142 tG~lraSy~~ydh~de~taAhsL~Fs~DG-----eqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~ 215 (406)
T KOG2919|consen 142 TGKLRASYRAYDHQDEYTAAHSLQFSPDG-----EQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAF 215 (406)
T ss_pred ccccccchhhhhhHHhhhhheeEEecCCC-----CeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccceeeeeec
Confidence 999888775421 2345689999999 677665 5679999999 55542211 1 123678999999
Q ss_pred ecCC-CEEEEEeCCCeEEEEEccCCceeEEE-EcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccce-eEEEec-CCc
Q 019326 139 HHSG-KLALTVGRDDCLAMVNLVRGRRSFYH-KIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAK-LLCELD-GKK 212 (343)
Q Consensus 139 ~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~-~~~~~~-~~~ 212 (343)
+|-. +.+++++....+-+|.-..+.++... .+.+.|+.++|.++|+.|+++ .+..|..||++..+ ++..+. |..
T Consensus 216 sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~ 295 (406)
T KOG2919|consen 216 SPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVG 295 (406)
T ss_pred cCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhcc
Confidence 9965 58999999888888887776665543 456889999999999999999 78999999998744 444444 222
Q ss_pred -ceEEeeec---CCCeEEEEeCCCcEEEEECCC-CceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEE
Q 019326 213 -RILCAAPG---ENGVLFTGGEDRSITAWDTNS-GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVIC 287 (343)
Q Consensus 213 -~i~~~~~~---~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~ 287 (343)
.-..+.|. .++.|++|+.||.|++||++. +..+..+. .|...++.++++|.-+ ++++++.. +
T Consensus 296 ~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~-~~sd~vNgvslnP~mp---------ilatssGq---r 362 (406)
T KOG2919|consen 296 DTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTG-NYSDTVNGVSLNPIMP---------ILATSSGQ---R 362 (406)
T ss_pred CccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccc-cccccccceecCcccc---------eeeeccCc---e
Confidence 22234443 578999999999999999998 67677777 8999999999999987 88888765 4
Q ss_pred EEeccC
Q 019326 288 VWDVRM 293 (343)
Q Consensus 288 vwd~~~ 293 (343)
+|...+
T Consensus 363 ~f~~~~ 368 (406)
T KOG2919|consen 363 IFKYPK 368 (406)
T ss_pred eecCCC
Confidence 454433
No 172
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=4.2e-21 Score=158.08 Aligned_cols=240 Identities=18% Similarity=0.233 Sum_probs=182.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC-------
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS------- 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~------- 72 (343)
.|++++.||.|.+|+++.. ........+++.+|++|.++|.|+++. +..+++|+.||+|+.|++...
T Consensus 308 ~lit~sed~~lk~WnLqk~----~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~ 383 (577)
T KOG0642|consen 308 VLITASEDGTLKLWNLQKA----KKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSY 383 (577)
T ss_pred eEEEeccccchhhhhhccc----CCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCccccc
Confidence 3789999999999999441 125566789999999999999999998 899999999999999966421
Q ss_pred ---eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeee--ccccEEEEEEecCC-CEEE
Q 019326 73 ---SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKV--HKKGVNDLAVHHSG-KLAL 146 (343)
Q Consensus 73 ---~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~i~~~~~~-~~l~ 146 (343)
.....+.+| ...|+.+++++.. ..|++++.||+++.|+.....+ .++.. ..+...++++-... .+.+
T Consensus 384 dp~vl~~~l~Gh-tdavw~l~~s~~~-----~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~ 456 (577)
T KOG0642|consen 384 DPSVLSGTLLGH-TDAVWLLALSSTK-----DRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSL 456 (577)
T ss_pred Ccchhccceecc-ccceeeeeecccc-----cceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhh
Confidence 234467788 9999999999988 7899999999999999866554 33322 22334555554432 2333
Q ss_pred EEeCCCeEEEEEccCCceeEEEEc--------CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEE
Q 019326 147 TVGRDDCLAMVNLVRGRRSFYHKI--------GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILC 216 (343)
Q Consensus 147 ~~~~d~~i~~wd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~ 216 (343)
+...-+.-.+++............ ...+..+..+|...+.+++ .++.|+++|..+++++.... |...+++
T Consensus 457 ~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svts 536 (577)
T KOG0642|consen 457 ASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTS 536 (577)
T ss_pred hhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecc
Confidence 333334444455555544433332 1346678889999999999 99999999999999988766 8899999
Q ss_pred eeecC-CCeEEEEeCCCcEEEEECCCCceeEEeccccc
Q 019326 217 AAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHS 253 (343)
Q Consensus 217 ~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~ 253 (343)
+++.+ +.+|++++.|+.+++|.+....++.... +|.
T Consensus 537 lai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~-~~r 573 (577)
T KOG0642|consen 537 LAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLEST-AHR 573 (577)
T ss_pred eeecCCCceEEeecCCceeehhhccchheeeccc-ccc
Confidence 99984 5699999999999999998777776665 554
No 173
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.86 E-value=9.7e-18 Score=145.93 Aligned_cols=283 Identities=25% Similarity=0.364 Sum_probs=211.7
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC-CCeEEEEe-c--Cc-eEEEeeC-CCeEEEEEcCC-Ceee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL-SPITTVAV-S--GT-AAASGGT-DDTIHLYDLST-SSSL 75 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~-~--~~-~l~s~~~-dg~i~iwd~~~-~~~~ 75 (343)
++.++.|+.+.+|+.... . .....+.++. ..+..+.+ . +. .++..+. |+.+++|+... ....
T Consensus 80 ~~~~~~d~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 148 (466)
T COG2319 80 LLSGSSDGTIKLWDLDNG-------E----KLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLI 148 (466)
T ss_pred EEEecCCCcEEEEEcCCC-------c----eeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCeEE
Confidence 556778999999998861 1 2344444433 36676666 4 44 4555444 99999999998 7888
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-CCeEEEEECCCcceeeeeeeccccEEEEEEecCCC-EEEEEeCCCe
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGK-LALTVGRDDC 153 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~~~d~~ 153 (343)
..+..| ...|..+.|+|++ ..+++++. |+.+++|+......+..+.+|...|.+++|+|++. .+++++.|+.
T Consensus 149 ~~~~~~-~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~ 222 (466)
T COG2319 149 RTLEGH-SESVTSLAFSPDG-----KLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGT 222 (466)
T ss_pred EEEecC-cccEEEEEECCCC-----CEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCc
Confidence 888888 8999999999999 68888885 99999999998888999999999999999999987 5555599999
Q ss_pred EEEEEccCCceeE-EEEc-CCcceEEEEeCCCCEEEEE-eCCcEEEEEccccee-EEEe-cCCcceEEeeecC-CCeEEE
Q 019326 154 LAMVNLVRGRRSF-YHKI-GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKL-LCEL-DGKKRILCAAPGE-NGVLFT 227 (343)
Q Consensus 154 i~~wd~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~-~~~~-~~~~~i~~~~~~~-~~~l~~ 227 (343)
+++||...+.... .... .... ...|+|++..++++ .++.+++|+...... ...+ .|...+.++.+.+ +..+++
T Consensus 223 i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 301 (466)
T COG2319 223 IRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLAS 301 (466)
T ss_pred EEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEE
Confidence 9999988666655 2222 2332 33899999787777 999999999987664 4443 4678899999986 667777
Q ss_pred EeCCCcEEEEECCCCceeEEec-ccccccEEEEEEEecC-CCCCCCCCCeEEEEE-cCCCcEEEEeccCccccCCCcccc
Q 019326 228 GGEDRSITAWDTNSGKVAYCIE-DAHSARVKGIVVLTKN-DGGSTAENPYLVASA-SSDGVICVWDVRMAIKEKPLPLAE 304 (343)
Q Consensus 228 ~~~dg~i~i~d~~~~~~~~~~~-~~h~~~v~~~~~~~~~-~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~ 304 (343)
++.|+.+.+||..+........ ..|...+..+.+ ... . .++.+ ..|+.+.+|++.... ....
T Consensus 302 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~d~~~~~~~~~~~~-----~~~~ 366 (466)
T COG2319 302 GSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF-SPDGS---------LLVSGGSDDGTIRLWDLRTGK-----PLKT 366 (466)
T ss_pred eeCCCcEEEEEcCCCceEEEeeecccCCceEEEEE-CCCCC---------EEEEeecCCCcEEeeecCCCc-----eeEE
Confidence 8888899999998776555443 367778999998 532 2 45555 788999999999764 1112
Q ss_pred cccccceeEEEcCC
Q 019326 305 AKTNSRLTCLAGSS 318 (343)
Q Consensus 305 ~~~~~~i~~~~~s~ 318 (343)
......+..+.+++
T Consensus 367 ~~~~~~~~~~~~~~ 380 (466)
T COG2319 367 LEGHSNVLSVSFSP 380 (466)
T ss_pred ecCCceEEEEEECC
Confidence 22222277777777
No 174
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.86 E-value=5.5e-21 Score=147.50 Aligned_cols=235 Identities=16% Similarity=0.220 Sum_probs=168.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
.||+|+.-|.|+|.|+.. .+....+.+|...|+.+.+. .+++++++.|..||+|++++..++..|
T Consensus 107 ~la~~G~~GvIrVid~~~------------~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~Vf 174 (385)
T KOG1034|consen 107 FLAAGGYLGVIRVIDVVS------------GQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVF 174 (385)
T ss_pred eEEeecceeEEEEEecch------------hhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEe
Confidence 378888999999999987 45667788999999999998 679999999999999999999999887
Q ss_pred ---ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeee----------------------------ee
Q 019326 79 ---HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTS----------------------------VK 127 (343)
Q Consensus 79 ---~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----------------------------~~ 127 (343)
.+| ...|.++.|++++ .+|++++.|.++++|++...+.... -.
T Consensus 175 GG~egH-rdeVLSvD~~~~g-----d~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~d 248 (385)
T KOG1034|consen 175 GGVEGH-RDEVLSVDFSLDG-----DRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTD 248 (385)
T ss_pred cccccc-cCcEEEEEEcCCC-----CeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccc
Confidence 467 9999999999999 8999999999999999973221111 11
Q ss_pred eccccEEEEEEecCCCEEEEEeCCCeEEEEEccC-CceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEE
Q 019326 128 VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR-GRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLC 206 (343)
Q Consensus 128 ~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 206 (343)
-|...|-|+.|- |+++++=+-++.|..|.... ++.......+... ...+.
T Consensus 249 iHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~---------------------------~Ti~~ 299 (385)
T KOG1034|consen 249 IHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESA---------------------------TTILG 299 (385)
T ss_pred cccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccc---------------------------eeeee
Confidence 244445555554 45777777777888887621 1111100000000 01122
Q ss_pred Eec-CCcceEEeeec---CCCeEEEEeCCCcEEEEECCCCceeE--Eec-ccccccEEEEEEEecCCCCCCCCCCeEEEE
Q 019326 207 ELD-GKKRILCAAPG---ENGVLFTGGEDRSITAWDTNSGKVAY--CIE-DAHSARVKGIVVLTKNDGGSTAENPYLVAS 279 (343)
Q Consensus 207 ~~~-~~~~i~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s 279 (343)
.++ ....+.-+.|. -.+.|+.|...|.|++||++..++.. ++. .-....|...+|+.++. +|+.
T Consensus 300 ~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs---------~lv~ 370 (385)
T KOG1034|consen 300 EFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGS---------ILVL 370 (385)
T ss_pred EeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCc---------EEEE
Confidence 222 22334444443 36789999999999999999876632 222 01245788889988887 9999
Q ss_pred EcCCCcEEEEecc
Q 019326 280 ASSDGVICVWDVR 292 (343)
Q Consensus 280 ~~~dg~i~vwd~~ 292 (343)
.+.|++|--||..
T Consensus 371 vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 371 VCDDGTVWRWDRV 383 (385)
T ss_pred EeCCCcEEEEEee
Confidence 9999999999864
No 175
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.86 E-value=2e-17 Score=144.02 Aligned_cols=297 Identities=24% Similarity=0.307 Sum_probs=223.4
Q ss_pred eccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeC-CCeEEEEEcCCCeeeeEeccCC
Q 019326 6 GSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGT-DDTIHLYDLSTSSSLGAIHHHE 82 (343)
Q Consensus 6 g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~ 82 (343)
+..|+.+.+|+... .......+..|...|..++|+ +..+++++. |+.+++|+..+++.+..+..|
T Consensus 130 ~~~d~~~~~~~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 197 (466)
T COG2319 130 SSLDGTVKLWDLST-----------PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGH- 197 (466)
T ss_pred CCCCccEEEEEecC-----------CCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccC-
Confidence 34489999999874 134556677899999999999 667888875 999999999998888889888
Q ss_pred CCCeEEEEEeCCCCCCCCc-eEEEeeCCCeEEEEECCCcceee-eeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 83 SSSVTSLAFYTPQNLSVPR-NLFSTSADGFVSIFDADPFVLLT-SVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
...|.+++|+|++ . .+++++.|+.|++||...+.... .+..|.... ...|+|++..+++++.|+.+++|+++
T Consensus 198 ~~~v~~~~~~~~~-----~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~ 271 (466)
T COG2319 198 TDPVSSLAFSPDG-----GLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLR 271 (466)
T ss_pred CCceEEEEEcCCc-----ceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeec
Confidence 8999999999887 5 55555999999999988777777 688888775 44899999889999999999999998
Q ss_pred CCce-eEEE-EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec---CCcceEEeeecCC-CeEEEE-eCCC
Q 019326 161 RGRR-SFYH-KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD---GKKRILCAAPGEN-GVLFTG-GEDR 232 (343)
Q Consensus 161 ~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~-~~dg 232 (343)
.... .... .+...+..+.+.|++..++++ .++.+.+|+..+........ +...+..+.+.+. ..++.+ ..|+
T Consensus 272 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 351 (466)
T COG2319 272 SSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDG 351 (466)
T ss_pred CCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCC
Confidence 7765 3333 335788889999988888777 66889999998877665553 5556888888322 345555 6789
Q ss_pred cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccccccccccee
Q 019326 233 SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLT 312 (343)
Q Consensus 233 ~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~ 312 (343)
.+.+|+........... ....+..+.+.+ . .. ....+..++.+.+|+.............. ..+.
T Consensus 352 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 416 (466)
T COG2319 352 TIRLWDLRTGKPLKTLE--GHSNVLSVSFSP-D-GR-------VVSSGSTDGTVRLWDLSTGSLLRNLDGHT----SRVT 416 (466)
T ss_pred cEEeeecCCCceeEEec--CCceEEEEEECC-C-CC-------EEEEecCCCceEEEecccCeeeeeccCCC----CcEE
Confidence 99999998877333333 222278888877 5 32 33348999999999999864322221111 5688
Q ss_pred EEEcCCCCceeccccCCCCCCCc
Q 019326 313 CLAGSSTKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 313 ~~~~s~~~~~~~~~~~~~~~~~~ 335 (343)
...+++++.+.+.+..++.....
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~ 439 (466)
T COG2319 417 SLDFSPDGKSLASGSSDNTIRLW 439 (466)
T ss_pred EEEECCCCcEEEEecCCCcEEEE
Confidence 88888888888776666554443
No 176
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.86 E-value=1.3e-17 Score=139.98 Aligned_cols=285 Identities=14% Similarity=0.140 Sum_probs=180.8
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEee-CCCeEEEEEcCC-Cee--ee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGG-TDDTIHLYDLST-SSS--LG 76 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~-~dg~i~iwd~~~-~~~--~~ 76 (343)
+++...++.|++|++.. .. +...+..+. +.+....++++ +++|++++ .++.|.+|+++. ++. +.
T Consensus 5 y~~~~~~~~I~~~~~~~-------~g--~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~ 74 (330)
T PRK11028 5 YIASPESQQIHVWNLNH-------EG--ALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAA 74 (330)
T ss_pred EEEcCCCCCEEEEEECC-------CC--ceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEee
Confidence 34557789999999964 11 233444443 33556778888 77776654 578899999973 332 22
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-CCeEEEEECCCc-c---eeeeeeeccccEEEEEEecCCCEEEEEe-C
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-DGFVSIFDADPF-V---LLTSVKVHKKGVNDLAVHHSGKLALTVG-R 150 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~-~---~~~~~~~~~~~v~~i~~~~~~~~l~~~~-~ 150 (343)
... . ......++++|++ +++++++. ++.|.+|++++. . .+..+. +......++++|+++++++++ .
T Consensus 75 ~~~-~-~~~p~~i~~~~~g-----~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~ 146 (330)
T PRK11028 75 ESP-L-PGSPTHISTDHQG-----RFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLK 146 (330)
T ss_pred eec-C-CCCceEEEECCCC-----CEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCC
Confidence 222 2 3456789999999 67777664 889999999642 2 222222 233467789999998886555 5
Q ss_pred CCeEEEEEccCCceeE-------EEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEccc--c--eeEEEec-C------
Q 019326 151 DDCLAMVNLVRGRRSF-------YHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAED--A--KLLCELD-G------ 210 (343)
Q Consensus 151 d~~i~~wd~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~--~--~~~~~~~-~------ 210 (343)
++.|.+||+.+...+. .......+..+.|+|++++++++ .++.|.+|++.. + +.+..+. .
T Consensus 147 ~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~ 226 (330)
T PRK11028 147 EDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSD 226 (330)
T ss_pred CCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCC
Confidence 6999999998643221 11234556789999999999888 489999999973 2 2233332 1
Q ss_pred CcceEEeeecC-CCeEEEEe-CCCcEEEEECCCCceeEEecccc---cccEEEEEEEecCCCCCCCCCCeEEEEEcC-CC
Q 019326 211 KKRILCAAPGE-NGVLFTGG-EDRSITAWDTNSGKVAYCIEDAH---SARVKGIVVLTKNDGGSTAENPYLVASASS-DG 284 (343)
Q Consensus 211 ~~~i~~~~~~~-~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~-dg 284 (343)
......+.+++ +++++++. .++.|.+|++.+......+. .+ ......+.+++++. +|++++. ++
T Consensus 227 ~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~-~~~~~~~~p~~~~~~~dg~---------~l~va~~~~~ 296 (330)
T PRK11028 227 TRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFE-GHQPTETQPRGFNIDHSGK---------YLIAAGQKSH 296 (330)
T ss_pred CccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEe-EEEeccccCCceEECCCCC---------EEEEEEccCC
Confidence 11223466774 56777775 47899999986543222222 12 12456788888877 7776664 89
Q ss_pred cEEEEeccCccccCCCcccccccccceeEEEc
Q 019326 285 VICVWDVRMAIKEKPLPLAEAKTNSRLTCLAG 316 (343)
Q Consensus 285 ~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~ 316 (343)
+|.+|+++.... ....+..+.......|+++
T Consensus 297 ~v~v~~~~~~~g-~l~~~~~~~~g~~P~~~~~ 327 (330)
T PRK11028 297 HISVYEIDGETG-LLTELGRYAVGQGPMWVSV 327 (330)
T ss_pred cEEEEEEcCCCC-cEEEccccccCCCceEEEE
Confidence 999998863210 1112223334445666665
No 177
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.85 E-value=3e-19 Score=141.18 Aligned_cols=204 Identities=15% Similarity=0.177 Sum_probs=160.8
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc-------ceeeeeeeccccEEEEEEecCC-CEEEE
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF-------VLLTSVKVHKKGVNDLAVHHSG-KLALT 147 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~i~~~~~~-~~l~~ 147 (343)
..+.+| +++|..++|+|.++ ..|++|+.|.+|.||.+..+ +++..+.+|...|..++|+|.. +.|++
T Consensus 75 P~v~GH-t~~vLDi~w~PfnD----~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLls 149 (472)
T KOG0303|consen 75 PLVCGH-TAPVLDIDWCPFND----CVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLS 149 (472)
T ss_pred CCccCc-cccccccccCccCC----ceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhh
Confidence 345678 99999999999884 79999999999999998432 4677889999999999999965 78999
Q ss_pred EeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CC--cceEEeeecCCC
Q 019326 148 VGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GK--KRILCAAPGENG 223 (343)
Q Consensus 148 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~--~~i~~~~~~~~~ 223 (343)
++.|.+|.+||+.+++.+....++..+.++.|+.+|.++++. .|..|+|||.++++.+..-. |. .+...+...++.
T Consensus 150 ag~Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~ 229 (472)
T KOG0303|consen 150 AGSDNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGK 229 (472)
T ss_pred ccCCceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCc
Confidence 999999999999999998888899999999999999999999 99999999999999988764 33 345555555666
Q ss_pred eEEEEe---CCCcEEEEECCCCce---eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 224 VLFTGG---EDRSITAWDTNSGKV---AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 224 ~l~~~~---~dg~i~i~d~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
++.+|. .+..+.+||..+-+. +.++. .+..|.-=-+.++.. -..++|-.|+.||-|.+.+.
T Consensus 230 i~tTGfsr~seRq~aLwdp~nl~eP~~~~elD--tSnGvl~PFyD~dt~--------ivYl~GKGD~~IRYyEit~d 296 (472)
T KOG0303|consen 230 IFTTGFSRMSERQIALWDPNNLEEPIALQELD--TSNGVLLPFYDPDTS--------IVYLCGKGDSSIRYFEITNE 296 (472)
T ss_pred eeeeccccccccceeccCcccccCcceeEEec--cCCceEEeeecCCCC--------EEEEEecCCcceEEEEecCC
Confidence 555553 478899999876543 33443 333443333444433 14456667999999999875
No 178
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.85 E-value=4.9e-19 Score=140.43 Aligned_cols=278 Identities=14% Similarity=0.147 Sum_probs=196.4
Q ss_pred CCCeEEEEec---CceEEEeeCCCeEEEEEcCCCe---------eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 42 LSPITTVAVS---GTAAASGGTDDTIHLYDLSTSS---------SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 42 ~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
..+|.++.|. .+.++||+.|..|++|-+..+. .+..+..| ...|+++.|+|++ ++|++|+.+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H-~~aVN~vRf~p~g-----elLASg~D~ 86 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRH-TRAVNVVRFSPDG-----ELLASGGDG 86 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCC-cceeEEEEEcCCc-----CeeeecCCC
Confidence 4689999998 4589999999999999887542 33455667 8999999999999 899999999
Q ss_pred CeEEEEECC--------C--------cceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE-EcCC
Q 019326 110 GFVSIFDAD--------P--------FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH-KIGK 172 (343)
Q Consensus 110 g~i~iwd~~--------~--------~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~ 172 (343)
|.|.+|-.. + +.....+.+|...|..++|+|++.++++++.|+.+++||+..|+..... .+.+
T Consensus 87 g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~ 166 (434)
T KOG1009|consen 87 GEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEH 166 (434)
T ss_pred ceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccc
Confidence 999999764 2 2344566789999999999999999999999999999999999977654 4557
Q ss_pred cceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-----------CCcc-------------eEEeeecC-CCeEE
Q 019326 173 EASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-----------GKKR-------------ILCAAPGE-NGVLF 226 (343)
Q Consensus 173 ~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-----------~~~~-------------i~~~~~~~-~~~l~ 226 (343)
.+..++|.|-++++++- .|...+.+.+...+....+. ..+. ...++|++ +.+++
T Consensus 167 yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llv 246 (434)
T KOG1009|consen 167 YVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLV 246 (434)
T ss_pred ccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEE
Confidence 89999999999999988 77767777665443332221 1111 23345554 44555
Q ss_pred EEeC----CC-----cEEEEECCC-CceeEEecccccccEEEEEEEecCC----CC-----CCCCCCeEEEEEcCCCcEE
Q 019326 227 TGGE----DR-----SITAWDTNS-GKVAYCIEDAHSARVKGIVVLTKND----GG-----STAENPYLVASASSDGVIC 287 (343)
Q Consensus 227 ~~~~----dg-----~i~i~d~~~-~~~~~~~~~~h~~~v~~~~~~~~~~----~~-----~~~~~~~~l~s~~~dg~i~ 287 (343)
+.+. .+ ..++|+-.. .++...++ ....+...+.++|-.- .. ..-|-+-.++.++. ..|.
T Consensus 247 tPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp-~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~-~svy 324 (434)
T KOG1009|consen 247 TPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLP-SPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATK-NSVY 324 (434)
T ss_pred cccceeeeCCceeeceeEeeccccccCceeecC-CCCcceEEEEeeeeEEEeccccccccccccccceEEEEeec-ceEE
Confidence 5432 22 235555432 24555666 5566666666665311 00 00122224555554 5899
Q ss_pred EEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 288 VWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 288 vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
|||.++. .|......-+-..|+.++|++|+.+++..+.|+
T Consensus 325 vydtq~~---~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DG 364 (434)
T KOG1009|consen 325 VYDTQTL---EPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDG 364 (434)
T ss_pred Eeccccc---cceEEEeeeeeeeecceeecCCCcEEEEeccCC
Confidence 9999975 333333444556799999999999999888887
No 179
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.84 E-value=9.9e-19 Score=150.53 Aligned_cols=259 Identities=18% Similarity=0.185 Sum_probs=191.7
Q ss_pred CeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCee--eeEe----cc
Q 019326 10 KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSS--LGAI----HH 80 (343)
Q Consensus 10 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~--~~~~----~~ 80 (343)
+.+.+|++... ..+...+. -..+|+|++|+ +++++.|..+|+|.+||+..+.. ...+ ..
T Consensus 222 ~~~~vW~~~~p-----------~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~s 289 (555)
T KOG1587|consen 222 GVLLVWSLKNP-----------NTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVS 289 (555)
T ss_pred ceEEEEecCCC-----------CCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCccccccccc
Confidence 47899999862 23334443 46789999998 89999999999999999987755 2222 34
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcce-e-----eeee------eccccEEEEEEecCC-CEEEE
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL-L-----TSVK------VHKKGVNDLAVHHSG-KLALT 147 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~-----~~~~------~~~~~v~~i~~~~~~-~~l~~ 147 (343)
| ..+++.+.|..+.. +..+++++.||.|..|+++.... . .... .-...+++++|.+.. ..+++
T Consensus 290 h-~~~v~~vvW~~~~~---~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiV 365 (555)
T KOG1587|consen 290 H-SEPVTAVVWLQNEH---NTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIV 365 (555)
T ss_pred C-CcCeEEEEEeccCC---CCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEE
Confidence 5 89999999987662 24599999999999999864322 1 1111 112378899998854 68899
Q ss_pred EeCCCeEEEEEccC---Cc------eeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcc-cceeEEEec-CCcceE
Q 019326 148 VGRDDCLAMVNLVR---GR------RSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAE-DAKLLCELD-GKKRIL 215 (343)
Q Consensus 148 ~~~d~~i~~wd~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~-~~~~~~~~~-~~~~i~ 215 (343)
|+.+|.|.--+-.. .. ......+.+++..+.++|-...++.+ .|-.+++|... ...++..+. +...++
T Consensus 366 GTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~ 445 (555)
T KOG1587|consen 366 GTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVT 445 (555)
T ss_pred EcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceee
Confidence 99999987743322 22 11233445789999999987766666 99999999987 666666666 566699
Q ss_pred EeeecCC--CeEEEEeCCCcEEEEECCCC--ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 216 CAAPGEN--GVLFTGGEDRSITAWDTNSG--KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 216 ~~~~~~~--~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
+++|++. ..|+++..||.|.+||+... .++.+.. .+....+.+.+++.+. .|+.|...|++++|++
T Consensus 446 ~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~-~~~~~l~~~~~s~~g~---------~lavGd~~G~~~~~~l 515 (555)
T KOG1587|consen 446 DVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQK-VCSPALTRVRWSPNGK---------LLAVGDANGTTHILKL 515 (555)
T ss_pred eeEEcCcCceEEEEEcCCCceehhhhhccccCCccccc-ccccccceeecCCCCc---------EEEEecCCCcEEEEEc
Confidence 9999965 48999999999999999654 4555555 4456666777777676 9999999999999999
Q ss_pred cCc
Q 019326 292 RMA 294 (343)
Q Consensus 292 ~~~ 294 (343)
...
T Consensus 516 ~~~ 518 (555)
T KOG1587|consen 516 SES 518 (555)
T ss_pred Cch
Confidence 753
No 180
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1.7e-18 Score=152.65 Aligned_cols=282 Identities=16% Similarity=0.167 Sum_probs=199.1
Q ss_pred CeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccC--CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC-
Q 019326 44 PITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHH--ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD- 118 (343)
Q Consensus 44 ~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~- 118 (343)
+-..+.|+ ...++++...-.|++||.+.++.+..|..+ ....|+.+.+-...+ ..++++|+.||.|+||+--
T Consensus 1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D---~aLlLtas~dGvIRIwk~y~ 1142 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQD---DALLLTASSDGVIRIWKDYA 1142 (1387)
T ss_pred CCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccc---hhheeeeccCceEEEecccc
Confidence 44556666 667888887778999999999998888644 146789998876542 3689999999999999752
Q ss_pred ----Ccceeeeeeecc-------ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCc--ceEEEEe-CCCC
Q 019326 119 ----PFVLLTSVKVHK-------KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKE--ASLIKFD-GSGE 184 (343)
Q Consensus 119 ----~~~~~~~~~~~~-------~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~-~~~~ 184 (343)
+.+.+..+.+-. +.=.-++|.....+|+++|.-..|+|||............... ++.+.-+ +.|+
T Consensus 1143 ~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn 1222 (1387)
T KOG1517|consen 1143 DKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGN 1222 (1387)
T ss_pred cccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCc
Confidence 233444333211 1113467877777888888789999999998877766665543 3333332 2468
Q ss_pred EEEEE-eCCcEEEEEccccee---EEEec-CCcc--eEEeeecC-C-CeEEEEeCCCcEEEEECCCCce--eEEeccccc
Q 019326 185 KFFMV-TEEKVGIHQAEDAKL---LCELD-GKKR--ILCAAPGE-N-GVLFTGGEDRSITAWDTNSGKV--AYCIEDAHS 253 (343)
Q Consensus 185 ~~~~~-~~~~i~~~d~~~~~~---~~~~~-~~~~--i~~~~~~~-~-~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~h~ 253 (343)
.++++ .||.+++||.+.... +...+ |... |..+.+.. + ..|++|+.+|.|++||++.... ..++. .|.
T Consensus 1223 ~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv-~~~ 1301 (1387)
T KOG1517|consen 1223 IIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIV-AHW 1301 (1387)
T ss_pred eEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceee-ecc
Confidence 88888 999999999986543 23332 5544 88888864 2 4699999999999999997422 22222 332
Q ss_pred ---ccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCC--CcccccccccceeEEEcCCCCceeccccC
Q 019326 254 ---ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKP--LPLAEAKTNSRLTCLAGSSTKSFKRPQIG 328 (343)
Q Consensus 254 ---~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--~~~~~~~~~~~i~~~~~s~~~~~~~~~~~ 328 (343)
+.++++.+++..+ .+|+|+. +.|+||++........ .+.......+.+.|++|+|-..++++|..
T Consensus 1302 ~yGs~lTal~VH~hap---------iiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~ 1371 (1387)
T KOG1517|consen 1302 EYGSALTALTVHEHAP---------IIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSA 1371 (1387)
T ss_pred ccCccceeeeeccCCC---------eeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccC
Confidence 3589999999988 8999988 9999999986532221 12222344456899999999999999988
Q ss_pred CCCCCCccccC
Q 019326 329 DSAPKGEEKAS 339 (343)
Q Consensus 329 ~~~~~~~~~~~ 339 (343)
|..+-.+..++
T Consensus 1372 Ds~V~iYs~~k 1382 (1387)
T KOG1517|consen 1372 DSTVSIYSCEK 1382 (1387)
T ss_pred CceEEEeecCC
Confidence 88665554433
No 181
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.84 E-value=1e-19 Score=152.26 Aligned_cols=226 Identities=18% Similarity=0.197 Sum_probs=168.2
Q ss_pred eccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCC-------eee
Q 019326 6 GSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTS-------SSL 75 (343)
Q Consensus 6 g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~-------~~~ 75 (343)
.+.-|.|-||+++.+... .-..+-.+ -....|+.+.|+ ...||+++.||.|++|.+..+ ...
T Consensus 599 ~g~gG~iai~el~~PGrL-------PDgv~p~l-~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe 670 (1012)
T KOG1445|consen 599 AGSGGVIAIYELNEPGRL-------PDGVMPGL-FNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPE 670 (1012)
T ss_pred cCCCceEEEEEcCCCCCC-------Cccccccc-ccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcc
Confidence 345689999999863221 11111111 135679999998 789999999999999998754 345
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEE
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLA 155 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~ 155 (343)
..+..| ...|+++.|+|-. .+.|++++.|.+|++||+.+++....+.+|.+.|.+++|+|+|+.+++.+.||+|+
T Consensus 671 ~~lt~h-~eKI~slRfHPLA----advLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~r 745 (1012)
T KOG1445|consen 671 KILTIH-GEKITSLRFHPLA----ADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLR 745 (1012)
T ss_pred eeeecc-cceEEEEEecchh----hhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEE
Confidence 567788 8999999999976 37999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCceeEEEE---cCCcceEEEEeCCCCEEEEE-----eCCcEEEEEcccc--eeEEEecCCcc----eEEeeecC
Q 019326 156 MVNLVRGRRSFYHK---IGKEASLIKFDGSGEKFFMV-----TEEKVGIHQAEDA--KLLCELDGKKR----ILCAAPGE 221 (343)
Q Consensus 156 ~wd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~d~~~~--~~~~~~~~~~~----i~~~~~~~ 221 (343)
+|+.++++...... .+.....+.|.-+|+++++. +...+.+||.++- ..+.+...... +.......
T Consensus 746 Vy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds 825 (1012)
T KOG1445|consen 746 VYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDS 825 (1012)
T ss_pred EeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCC
Confidence 99998876433222 12344568888899988777 3566888987753 23333221111 22222223
Q ss_pred CCeEEEEeCCCcEEEEECCCCce
Q 019326 222 NGVLFTGGEDRSITAWDTNSGKV 244 (343)
Q Consensus 222 ~~~l~~~~~dg~i~i~d~~~~~~ 244 (343)
+-++++|-.|..|++|.+-...+
T Consensus 826 ~~lfltGKGD~~v~~yEv~~esP 848 (1012)
T KOG1445|consen 826 NVLFLTGKGDRFVNMYEVIYESP 848 (1012)
T ss_pred ceEEEecCCCceEEEEEecCCCc
Confidence 44788999999999999865443
No 182
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.84 E-value=1.2e-18 Score=150.04 Aligned_cols=258 Identities=14% Similarity=0.158 Sum_probs=187.4
Q ss_pred CCeEEEEEcCCC-eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcce--eee----eeeccccE
Q 019326 61 DDTIHLYDLSTS-SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL--LTS----VKVHKKGV 133 (343)
Q Consensus 61 dg~i~iwd~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~----~~~~~~~v 133 (343)
++.+.+|+++.. .+...+.. ...|.++.|+|.. +.+++.|..+|.|.+||++.+.. ... ...|..++
T Consensus 221 ~~~~~vW~~~~p~~Pe~~~~~--~s~v~~~~f~p~~----p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v 294 (555)
T KOG1587|consen 221 DGVLLVWSLKNPNTPELVLES--PSEVTCLKFCPFD----PNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPV 294 (555)
T ss_pred CceEEEEecCCCCCceEEEec--CCceeEEEeccCC----cceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCe
Confidence 357999999876 34444444 5899999999998 58999999999999999976554 222 23588899
Q ss_pred EEEEEecCC--CEEEEEeCCCeEEEEEccCCceeEE-------------EEcCCcceEEEEeCCC-CEEEEE-eCCcEEE
Q 019326 134 NDLAVHHSG--KLALTVGRDDCLAMVNLVRGRRSFY-------------HKIGKEASLIKFDGSG-EKFFMV-TEEKVGI 196 (343)
Q Consensus 134 ~~i~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~-------------~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~~ 196 (343)
..+.|..+- .-+++++.||.|..|+++.-..... ......+..++|.+.. ..|+++ ..|.|..
T Consensus 295 ~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~ 374 (555)
T KOG1587|consen 295 TAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYK 374 (555)
T ss_pred EEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEE
Confidence 999997754 4599999999999998875432110 1112456778888854 456666 7777776
Q ss_pred EEccccee--------E-EEecCCcceEEeeecC--CCeEEEEeCCCcEEEEECC-CCceeEEecccccccEEEEEEEec
Q 019326 197 HQAEDAKL--------L-CELDGKKRILCAAPGE--NGVLFTGGEDRSITAWDTN-SGKVAYCIEDAHSARVKGIVVLTK 264 (343)
Q Consensus 197 ~d~~~~~~--------~-~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~h~~~v~~~~~~~~ 264 (343)
-+....+. . ....|.++|.++.+++ ...+++++ |.+++||... ...++..+. .+...|++++|+|.
T Consensus 375 ~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~-~~~~~v~~vaWSpt 452 (555)
T KOG1587|consen 375 GCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLD-SSPDYVTDVAWSPT 452 (555)
T ss_pred EeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhh-hccceeeeeEEcCc
Confidence 33332221 1 1122789999999884 34555555 9999999988 677887777 78888999999998
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccc-cccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 265 NDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAK-TNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 265 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
... .++++..||.|.+||+...... |+.... .....+++.+++++++++.|...|.....+.
T Consensus 453 rpa--------vF~~~d~~G~l~iWDLl~~~~~---Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l 515 (555)
T KOG1587|consen 453 RPA--------VFATVDGDGNLDIWDLLQDDEE---PVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKL 515 (555)
T ss_pred Cce--------EEEEEcCCCceehhhhhccccC---CcccccccccccceeecCCCCcEEEEecCCCcEEEEEc
Confidence 763 8999999999999999876322 222221 1455788889999999999999996665544
No 183
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.83 E-value=4.2e-20 Score=148.89 Aligned_cols=276 Identities=16% Similarity=0.203 Sum_probs=215.6
Q ss_pred CeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc
Q 019326 44 PITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV 121 (343)
Q Consensus 44 ~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 121 (343)
.-..+.++ |..|+.|+.-|.|-.+|..++++..++... ..|.++.|..+. .+++......++|||-.. .
T Consensus 131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~--Etv~Dv~~LHne------q~~AVAQK~y~yvYD~~G-t 201 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVM--ETVRDVTFLHNE------QFFAVAQKKYVYVYDNNG-T 201 (545)
T ss_pred CCeeeeecCCccEEEecCCccceeeeecccceeeeeeehh--hhhhhhhhhcch------HHHHhhhhceEEEecCCC-c
Confidence 34556776 899999999999999999999999998866 789999999887 445556677899999654 5
Q ss_pred eeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC-CcceEEEEeCCCCEEEEE-eCCcEEEEEc
Q 019326 122 LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG-KEASLIKFDGSGEKFFMV-TEEKVGIHQA 199 (343)
Q Consensus 122 ~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~i~~~d~ 199 (343)
.++.++.| ..|..+.|.|..-+|++++..|.++.-|+.+|+.+..+... +.+..++-+|-+..+-++ ..|+|.+|..
T Consensus 202 ElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP 280 (545)
T KOG1272|consen 202 ELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSP 280 (545)
T ss_pred EEeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCC
Confidence 66666644 46889999999999999999999999999999988766654 677888999999999999 9999999999
Q ss_pred ccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEE
Q 019326 200 EDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLV 277 (343)
Q Consensus 200 ~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l 277 (343)
...+++..+- |.++|.++++. .|.|+++.+.|..++|||++....+.++. . ..+...++++..+ +|
T Consensus 281 ~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~-t-p~~a~~ls~Sqkg----------lL 348 (545)
T KOG1272|consen 281 NSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYR-T-PHPASNLSLSQKG----------LL 348 (545)
T ss_pred CCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceee-c-CCCcccccccccc----------ce
Confidence 9888776554 99999999998 57899999999999999999988777776 2 4567788888876 44
Q ss_pred EEEcCCCcEEEE-eccCccccCCCcccccccccceeEEEcCC------------CCceeccccCCCCCCCccccCccC
Q 019326 278 ASASSDGVICVW-DVRMAIKEKPLPLAEAKTNSRLTCLAGSS------------TKSFKRPQIGDSAPKGEEKASMED 342 (343)
Q Consensus 278 ~s~~~dg~i~vw-d~~~~~~~~~~~~~~~~~~~~i~~~~~s~------------~~~~~~~~~~~~~~~~~~~~~~~~ 342 (343)
|. |....+.|| |.-.+......+.......++|..+.|.| -..++++|+++......+...+|.
T Consensus 349 A~-~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~tsilVPGsGePN~Ds~e~nPfet 425 (545)
T KOG1272|consen 349 AL-SYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITSILVPGSGEPNYDSLEDNPFET 425 (545)
T ss_pred ee-ecCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCCceeEeccCCCCCCcchhccCcchh
Confidence 44 455589999 44432212223333444555777777765 345788888888777666655553
No 184
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.83 E-value=9.5e-19 Score=147.40 Aligned_cols=263 Identities=13% Similarity=0.130 Sum_probs=202.5
Q ss_pred CeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc
Q 019326 44 PITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV 121 (343)
Q Consensus 44 ~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 121 (343)
.|..++|. |..|+.+.. ..+.+||...|..+..+++| ...|.+++|+.+| +.+++|+.|..|.+|+.+- +
T Consensus 14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLKgH-KDtVycVAys~dG-----krFASG~aDK~VI~W~~kl-E 85 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLKGH-KDTVYCVAYAKDG-----KRFASGSADKSVIIWTSKL-E 85 (1081)
T ss_pred chheeEECCCCceEEEecC-CEEEEEeCCCcccccccccc-cceEEEEEEccCC-----ceeccCCCceeEEEecccc-c
Confidence 78899998 666666553 46999999999999999999 9999999999999 8999999999999998642 2
Q ss_pred eeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcc
Q 019326 122 LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAE 200 (343)
Q Consensus 122 ~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~ 200 (343)
-+..+ .|.+.|.|+.|+|-...|++++-+ ..-+|..... .+........+.+++|..+|++++.+ .+|+|.+-+..
T Consensus 86 G~LkY-SH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK-~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~ 162 (1081)
T KOG1538|consen 86 GILKY-SHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQK-SVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKN 162 (1081)
T ss_pred ceeee-ccCCeeeEeecCchHHHhhhcchh-hccccChhhh-hHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCC
Confidence 22223 499999999999999899998864 4667876543 33344455678889999999999999 99999998644
Q ss_pred cceeEEEec----CCcceEEeeecC------CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCC
Q 019326 201 DAKLLCELD----GKKRILCAAPGE------NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGST 270 (343)
Q Consensus 201 ~~~~~~~~~----~~~~i~~~~~~~------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 270 (343)
. +..-.+. .+.+|.+++|++ ...+++.....++.+|.+. |+.+..-. .-.-...++.+.+++.
T Consensus 163 g-Eek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r-~L~FdP~CisYf~NGE---- 235 (1081)
T KOG1538|consen 163 G-EEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDR-ALNFDPCCISYFTNGE---- 235 (1081)
T ss_pred C-CcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccc-cCCCCchhheeccCCc----
Confidence 3 3333332 568899999983 2377888888888888876 55554333 3444567888988888
Q ss_pred CCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCC
Q 019326 271 AENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKG 334 (343)
Q Consensus 271 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~ 334 (343)
+++.|+.|+.+++|.-+.-... .+ ...+.-|..++..|++.+.+.|..|+.+--
T Consensus 236 -----y~LiGGsdk~L~~fTR~GvrLG---Tv--g~~D~WIWtV~~~PNsQ~v~~GCqDGTiAC 289 (1081)
T KOG1538|consen 236 -----YILLGGSDKQLSLFTRDGVRLG---TV--GEQDSWIWTVQAKPNSQYVVVGCQDGTIAC 289 (1081)
T ss_pred -----EEEEccCCCceEEEeecCeEEe---ec--cccceeEEEEEEccCCceEEEEEccCeeeh
Confidence 9999999999999976542111 11 224557999999999999999999997643
No 185
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.83 E-value=6.9e-18 Score=150.98 Aligned_cols=273 Identities=16% Similarity=0.194 Sum_probs=190.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC-------
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS------- 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~------- 72 (343)
.+++|+.||+|++|+..... +.....+...++.-....+.++... ++.+|.++.||.|++.+++..
T Consensus 1063 ~FvsgS~DGtVKvW~~~k~~-----~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~ 1137 (1431)
T KOG1240|consen 1063 LFVSGSDDGTVKVWNLRKLE-----GEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVA 1137 (1431)
T ss_pred eEEEecCCceEEEeeehhhh-----cCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEcccccccccee
Confidence 37899999999999998743 2223444455554456777777766 899999999999999998762
Q ss_pred eeeeEeccCCCCCeEEE-EEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeee--eccccEEEEEEecCCCEEEEEe
Q 019326 73 SSLGAIHHHESSSVTSL-AFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK--VHKKGVNDLAVHHSGKLALTVG 149 (343)
Q Consensus 73 ~~~~~~~~~~~~~v~~l-~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~~~~ 149 (343)
.+.+....+..+.+.++ +|..... ...++.+...+.|..||++......+++ ...+.|++++.+|.+++++.|.
T Consensus 1138 ~~~ri~n~~~~g~vv~m~a~~~~~~---S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGt 1214 (1431)
T KOG1240|consen 1138 TQVRIPNLKKDGVVVSMHAFTAIVQ---SHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGT 1214 (1431)
T ss_pred eeeecccccCCCceEEeeccccccc---ceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEec
Confidence 12222223323444444 4443331 1378888999999999998876665554 2356899999999999999999
Q ss_pred CCCeEEEEEccCCceeEEEEcC--CcceEEEEeCCC---CEEEEE---eCCcEEEEEcccceeEEEecCC----------
Q 019326 150 RDDCLAMVNLVRGRRSFYHKIG--KEASLIKFDGSG---EKFFMV---TEEKVGIHQAEDAKLLCELDGK---------- 211 (343)
Q Consensus 150 ~d~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~---~~~~i~~~d~~~~~~~~~~~~~---------- 211 (343)
..|.+.+||++-+..+....++ .++..+..+|-. ...+++ ..+.+.+|++.++.....+-..
T Consensus 1215 s~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~ 1294 (1431)
T KOG1240|consen 1215 SRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYAL 1294 (1431)
T ss_pred CCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhc
Confidence 9999999999998888777766 445556665533 344443 4688999999998665554311
Q ss_pred -c----------ceEEeeecCCCeEEEEeCCCcEEEEECCCCcee-----------------------------------
Q 019326 212 -K----------RILCAAPGENGVLFTGGEDRSITAWDTNSGKVA----------------------------------- 245 (343)
Q Consensus 212 -~----------~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----------------------------------- 245 (343)
. .+.|.....+..+++|+.|..|+.||....+..
T Consensus 1295 Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~ 1374 (1431)
T KOG1240|consen 1295 PSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIY 1374 (1431)
T ss_pred ccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhhhh
Confidence 0 112222225679999999999999998642211
Q ss_pred -------------EEec-------ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 246 -------------YCIE-------DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 246 -------------~~~~-------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
.... ..|..+|++|++...... +|++++.||.|+||.
T Consensus 1375 ~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~--------llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1375 QQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQP--------LLVSSSRDGVIKIWK 1431 (1431)
T ss_pred hhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCcc--------EEEEecCCCeeeecC
Confidence 0000 357778888887766532 899999999999994
No 186
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.82 E-value=4.1e-19 Score=141.66 Aligned_cols=192 Identities=19% Similarity=0.195 Sum_probs=157.1
Q ss_pred EEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeE
Q 019326 87 TSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF 166 (343)
Q Consensus 87 ~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 166 (343)
.+++|++++ ..+++|+.||++|+|+......+.....|...|.+++|+|||+.|++.+.| ..++|+.+++..+.
T Consensus 148 k~vaf~~~g-----s~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a 221 (398)
T KOG0771|consen 148 KVVAFNGDG-----SKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALA 221 (398)
T ss_pred eEEEEcCCC-----CEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhh
Confidence 689999998 799999999999999988888888888899999999999999999999999 89999999996544
Q ss_pred EEE---cCCcceEEEEeCCC---CEEEEE---eCCcEEEEEccccee------EEEecCCcceEEeeec-CCCeEEEEeC
Q 019326 167 YHK---IGKEASLIKFDGSG---EKFFMV---TEEKVGIHQAEDAKL------LCELDGKKRILCAAPG-ENGVLFTGGE 230 (343)
Q Consensus 167 ~~~---~~~~~~~~~~~~~~---~~~~~~---~~~~i~~~d~~~~~~------~~~~~~~~~i~~~~~~-~~~~l~~~~~ 230 (343)
... .+.....+.|+.++ .+.+.+ ..+.+..|++...+- .+.+.....|.+++.+ ++++++.|+.
T Consensus 222 ~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~ 301 (398)
T KOG0771|consen 222 RKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTM 301 (398)
T ss_pred hcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEecc
Confidence 333 22345567787766 333333 456677766653222 2222245689999999 6789999999
Q ss_pred CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 231 DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 231 dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
||.|.|++..+.+.++-.+.+|...|+.+.|+|+.+ ++++.+.|..+.|..+.-
T Consensus 302 dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr---------~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 302 DGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSR---------YLASVSSDNEAAVTKLAV 355 (398)
T ss_pred CCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcC---------cccccccCCceeEEEEee
Confidence 999999999999999998889999999999999988 899999999999988865
No 187
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.82 E-value=1.3e-18 Score=143.00 Aligned_cols=264 Identities=13% Similarity=0.102 Sum_probs=191.0
Q ss_pred CCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCe-EEEEEeCCC--CCCCCceEEEeeCCCeEEEE
Q 019326 40 AHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSV-TSLAFYTPQ--NLSVPRNLFSTSADGFVSIF 115 (343)
Q Consensus 40 ~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v-~~l~~~~~~--~~~~~~~l~s~~~dg~i~iw 115 (343)
.|...|.|+.|. ...++..+.|..+.+|.--+......+.-. ...+ +.+..-+.+ .-.....|+.++.||.+.+.
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p-~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il 90 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLP-DDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVIL 90 (737)
T ss_pred ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCC-cccCCccccccccccCCCCCcceEEEEcCCceEEEe
Confidence 366677788888 555666666777777665444333333222 1111 111111111 01123678899999999988
Q ss_pred ECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEE
Q 019326 116 DADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVG 195 (343)
Q Consensus 116 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 195 (343)
+- .++....+..|.+.+.+-.|+|+|.-|++++.||.|++|.-...-.........++.|++|.|+.+.++.+..+.+.
T Consensus 91 ~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~ 169 (737)
T KOG1524|consen 91 NK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHIS 169 (737)
T ss_pred cc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEE
Confidence 74 45677788899999999999999999999999999999984322222233456789999999999999999888888
Q ss_pred EEEcccc-eeEEEecCCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCC
Q 019326 196 IHQAEDA-KLLCELDGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAEN 273 (343)
Q Consensus 196 ~~d~~~~-~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 273 (343)
+--+... ++++--.|.+-|.++.|++ .+++++|++|-..++||.. |..+..-. .|..+|++++|.|+.
T Consensus 170 IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~-~~ey~ITSva~npd~-------- 239 (737)
T KOG1524|consen 170 IKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSA-AEEYAITSVAFNPEK-------- 239 (737)
T ss_pred EeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCC-hhccceeeeeecccc--------
Confidence 8877654 4445555999999999984 6799999999999999977 77777777 899999999999994
Q ss_pred CeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCC
Q 019326 274 PYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPK 333 (343)
Q Consensus 274 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~ 333 (343)
.++.+|.. ++| ++ ...-+.|..++||+||.-+..+.+.+.+.
T Consensus 240 --~~~v~S~n-t~R---~~------------~p~~GSifnlsWS~DGTQ~a~gt~~G~v~ 281 (737)
T KOG1524|consen 240 --DYLLWSYN-TAR---FS------------SPRVGSIFNLSWSADGTQATCGTSTGQLI 281 (737)
T ss_pred --ceeeeeee-eee---ec------------CCCccceEEEEEcCCCceeeccccCceEE
Confidence 45555543 444 11 12234599999999999999998888543
No 188
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.82 E-value=7.8e-18 Score=132.25 Aligned_cols=234 Identities=18% Similarity=0.211 Sum_probs=178.5
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC--CeEEEEEcc
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD--DCLAMVNLV 160 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d--~~i~~wd~~ 160 (343)
...+..+.|+.+. ..|..|+.||. ++|.................|.-+-|+.. +++..+.+ +.+++++++
T Consensus 5 ~~ti~~~~~Nqd~-----~~lsvGs~~Gy-k~~~~~~~~k~~~~~~~~~~IvEmLFSSS--LvaiV~~~qpr~Lkv~~~K 76 (391)
T KOG2110|consen 5 KPTINFIGFNQDS-----TLLSVGSKDGY-KIFSCSPFEKCFSKDTEGVSIVEMLFSSS--LVAIVSIKQPRKLKVVHFK 76 (391)
T ss_pred Ccceeeeeeccce-----eEEEccCCCce-eEEecCchHHhhcccCCCeEEEEeecccc--eeEEEecCCCceEEEEEcc
Confidence 4567778888887 67888888874 77887665443222223335666667654 56655554 459999999
Q ss_pred CCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec----CCcceEEeeecC-CCeEEEE--eCCCc
Q 019326 161 RGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD----GKKRILCAAPGE-NGVLFTG--GEDRS 233 (343)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~----~~~~i~~~~~~~-~~~l~~~--~~dg~ 233 (343)
.+..+.....+.++.++.++ .++++++-...|.|||+++.+++.++. +...+.++.++. +.+++-- ...|.
T Consensus 77 k~~~ICe~~fpt~IL~VrmN--r~RLvV~Lee~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~Gd 154 (391)
T KOG2110|consen 77 KKTTICEIFFPTSILAVRMN--RKRLVVCLEESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGD 154 (391)
T ss_pred cCceEEEEecCCceEEEEEc--cceEEEEEcccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCce
Confidence 99999999999999988885 567777755559999999999999887 334466666664 3466643 34689
Q ss_pred EEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCc-EEEEeccCccccCCCccccccccccee
Q 019326 234 ITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGV-ICVWDVRMAIKEKPLPLAEAKTNSRLT 312 (343)
Q Consensus 234 i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~i~ 312 (343)
|.+||..+-+++..+. +|.+++.+++|+++|. +|||+|+.|+ |||+.+.++.+...+. ......+|.
T Consensus 155 V~l~d~~nl~~v~~I~-aH~~~lAalafs~~G~---------llATASeKGTVIRVf~v~~G~kl~eFR--RG~~~~~Iy 222 (391)
T KOG2110|consen 155 VVLFDTINLQPVNTIN-AHKGPLAALAFSPDGT---------LLATASEKGTVIRVFSVPEGQKLYEFR--RGTYPVSIY 222 (391)
T ss_pred EEEEEcccceeeeEEE-ecCCceeEEEECCCCC---------EEEEeccCceEEEEEEcCCccEeeeee--CCceeeEEE
Confidence 9999999999999999 9999999999999998 9999999997 7999999886444322 222345799
Q ss_pred EEEcCCCCceeccccCCCCCCCcccc
Q 019326 313 CLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 313 ~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
+++|+++..|+.+.+..+.++.++..
T Consensus 223 SL~Fs~ds~~L~~sS~TeTVHiFKL~ 248 (391)
T KOG2110|consen 223 SLSFSPDSQFLAASSNTETVHIFKLE 248 (391)
T ss_pred EEEECCCCCeEEEecCCCeEEEEEec
Confidence 99999999999999999977665543
No 189
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.82 E-value=2.3e-18 Score=133.83 Aligned_cols=270 Identities=11% Similarity=0.103 Sum_probs=192.4
Q ss_pred ceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee--eecc
Q 019326 53 TAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV--KVHK 130 (343)
Q Consensus 53 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~ 130 (343)
+.+|++...|.|++||..+++.+..|+++ ...++.++|.... .+..+.+++.||+|++||++.......+ ..+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~-~~~~N~vrf~~~d---s~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~ 116 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGP-PATTNGVRFISCD---SPHGVISCSSDGTVRLWDIRSQAESARISWTQQS 116 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCC-CCcccceEEecCC---CCCeeEEeccCCeEEEEEeecchhhhheeccCCC
Confidence 56888999999999999999999999999 8999999998753 1478999999999999999876655444 3444
Q ss_pred -ccEEEEEEecCCCEEEEEeC----CCeEEEEEccCCce-eE--EEEcCCcceEEEEeCCCC-EEEEE-eCCcEEEEEcc
Q 019326 131 -KGVNDLAVHHSGKLALTVGR----DDCLAMVNLVRGRR-SF--YHKIGKEASLIKFDGSGE-KFFMV-TEEKVGIHQAE 200 (343)
Q Consensus 131 -~~v~~i~~~~~~~~l~~~~~----d~~i~~wd~~~~~~-~~--~~~~~~~~~~~~~~~~~~-~~~~~-~~~~i~~~d~~ 200 (343)
.+..+++.+-.++.+++|.. +-.+.+||+|..++ +. ...+...|++++|+|+.. .++++ .||.+.+||+.
T Consensus 117 ~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~ 196 (376)
T KOG1188|consen 117 GTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK 196 (376)
T ss_pred CCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence 35666776666777777754 67899999998876 32 345678899999999765 55666 89999999997
Q ss_pred cce----eEEEecCCcceEEeeecCCC--eEEEEeCCCcEEEEECCCCceeEEecccc------------cccEEEEEEE
Q 019326 201 DAK----LLCELDGKKRILCAAPGENG--VLFTGGEDRSITAWDTNSGKVAYCIEDAH------------SARVKGIVVL 262 (343)
Q Consensus 201 ~~~----~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~h------------~~~v~~~~~~ 262 (343)
... +...+.+...|.++.|.... .+.+-+..+...+|+++.+.....+.... ..-|.+. +
T Consensus 197 ~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~--~ 274 (376)
T KOG1188|consen 197 KDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEH--S 274 (376)
T ss_pred CCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecc--c
Confidence 643 44555678889999998544 78888899999999999887555444110 0011111 1
Q ss_pred ecCCCCCCCCCCeEEEEEcC-CCcEEEEecc---CccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCcc
Q 019326 263 TKNDGGSTAENPYLVASASS-DGVICVWDVR---MAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEE 336 (343)
Q Consensus 263 ~~~~~~~~~~~~~~l~s~~~-dg~i~vwd~~---~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~ 336 (343)
|... ..++.++. -+...++-+. ++............+..-|..+.|...+.++..+.+|+.+..++
T Consensus 275 ~~~~--------~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk 344 (376)
T KOG1188|consen 275 PGDK--------DTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWK 344 (376)
T ss_pred CCCc--------ceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEe
Confidence 2211 24555444 5666665444 33333444444455556677777877777888888887766555
No 190
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.82 E-value=1.3e-19 Score=160.89 Aligned_cols=247 Identities=15% Similarity=0.188 Sum_probs=181.3
Q ss_pred eCCCeEEEEEcCC--C----eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC------cceeeee
Q 019326 59 GTDDTIHLYDLST--S----SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP------FVLLTSV 126 (343)
Q Consensus 59 ~~dg~i~iwd~~~--~----~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~------~~~~~~~ 126 (343)
+.+.++.+|.+.. . +.+..+.. ....+.|+|.+.+.... .+|+.|..||.|.+||... ...+.+.
T Consensus 36 st~~slEifeld~~~~~~dlk~~~s~~s--~~rF~kL~W~~~g~~~~-GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~ 112 (1049)
T KOG0307|consen 36 STSASLEIFELDFSDESSDLKPVGSLQS--SNRFNKLAWGSYGSHSH-GLIAGGLEDGNIVLYDPASIIANASEEVLATK 112 (1049)
T ss_pred ccccccceeeecccCccccccccccccc--cccceeeeecccCCCcc-ceeeccccCCceEEecchhhccCcchHHHhhh
Confidence 4455666665542 2 23344443 37789999998883111 2588999999999999854 2356677
Q ss_pred eeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEE---EcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcc
Q 019326 127 KVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYH---KIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAE 200 (343)
Q Consensus 127 ~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~ 200 (343)
..|.+.|..+.|++.. +.|++|+.||.|.|||+...+..... .....|.+++|+..-.++++. .++.+.|||++
T Consensus 113 ~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr 192 (1049)
T KOG0307|consen 113 SKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLR 192 (1049)
T ss_pred cccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceecccc
Confidence 7899999999999976 59999999999999999886544433 345789999999877766555 77899999999
Q ss_pred cceeEEEecC---CcceEEeeecCC--CeEEEEeCCC---cEEEEECCCC-ceeEEecccccccEEEEEEEecCCCCCCC
Q 019326 201 DAKLLCELDG---KKRILCAAPGEN--GVLFTGGEDR---SITAWDTNSG-KVAYCIEDAHSARVKGIVVLTKNDGGSTA 271 (343)
Q Consensus 201 ~~~~~~~~~~---~~~i~~~~~~~~--~~l~~~~~dg---~i~i~d~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 271 (343)
..+.+-.+.. ...+..+.|+++ ..+++++.|. .|.+||+|.- .+++.+. +|...|.+|.|++.+.
T Consensus 193 ~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~-~H~~GilslsWc~~D~----- 266 (1049)
T KOG0307|consen 193 KKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILE-GHQRGILSLSWCPQDP----- 266 (1049)
T ss_pred CCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhc-ccccceeeeccCCCCc-----
Confidence 9988877763 344788999954 3556655543 5999999865 4667776 9999999999998874
Q ss_pred CCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCc
Q 019326 272 ENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKS 321 (343)
Q Consensus 272 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 321 (343)
++|+|++.|++|.+|+.++++.....+. .+.-+..+.|.|...
T Consensus 267 ---~lllSsgkD~~ii~wN~~tgEvl~~~p~----~~nW~fdv~w~pr~P 309 (1049)
T KOG0307|consen 267 ---RLLLSSGKDNRIICWNPNTGEVLGELPA----QGNWCFDVQWCPRNP 309 (1049)
T ss_pred ---hhhhcccCCCCeeEecCCCceEeeecCC----CCcceeeeeecCCCc
Confidence 2999999999999999999764333332 112245555555444
No 191
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=1e-17 Score=124.52 Aligned_cols=211 Identities=16% Similarity=0.219 Sum_probs=156.1
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC----------cceeeeeeeccccEEEEEEecCCCEEEEEeCCCeE
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP----------FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCL 154 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i 154 (343)
.|.+-+++|.+ ++|++|..+|.|.+..+.. ...+...++|.++|..++|+. .+|++++ ||.|
T Consensus 12 tvf~qa~sp~~-----~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d--~~Lls~g-dG~V 83 (325)
T KOG0649|consen 12 TVFAQAISPSK-----QYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD--DFLLSGG-DGLV 83 (325)
T ss_pred HHHHHhhCCcc-----eEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh--hheeecc-CceE
Confidence 45556788888 8999999999999998742 234555688999999999994 3677766 4999
Q ss_pred EEEEccCCce------eEEEE--------cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEee
Q 019326 155 AMVNLVRGRR------SFYHK--------IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAA 218 (343)
Q Consensus 155 ~~wd~~~~~~------~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~ 218 (343)
+-|..+.... +.... .-..|+.+.+.|..+.++.+ .|+.++.||+++++..+.++ |...+.++.
T Consensus 84 ~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv 163 (325)
T KOG0649|consen 84 YGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVV 163 (325)
T ss_pred EEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeee
Confidence 9998765332 11111 11457889999987777777 99999999999999999998 778898888
Q ss_pred ec-CCCeEEEEeCCCcEEEEECCCCceeEEecc--------cc-cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEE
Q 019326 219 PG-ENGVLFTGGEDRSITAWDTNSGKVAYCIED--------AH-SARVKGIVVLTKNDGGSTAENPYLVASASSDGVICV 288 (343)
Q Consensus 219 ~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--------~h-~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~v 288 (343)
.- ....+++|++||++++||.++++.+..+.. .| ...|-+++.+.+ +|++|+ ...+.+
T Consensus 164 ~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~ed-----------WlvCGg-Gp~lsl 231 (325)
T KOG0649|consen 164 GRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNED-----------WLVCGG-GPKLSL 231 (325)
T ss_pred ecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCc-----------eEEecC-CCceeE
Confidence 74 566899999999999999999998877651 11 234666666554 777776 457999
Q ss_pred EeccCccccCCCcccccccccceeEEEcCCCC
Q 019326 289 WDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTK 320 (343)
Q Consensus 289 wd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 320 (343)
|.+++.... ..+....++.-+.|-.+.
T Consensus 232 whLrsse~t-----~vfpipa~v~~v~F~~d~ 258 (325)
T KOG0649|consen 232 WHLRSSEST-----CVFPIPARVHLVDFVDDC 258 (325)
T ss_pred EeccCCCce-----EEEecccceeEeeeecce
Confidence 999987533 333444555555554443
No 192
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.81 E-value=1.2e-17 Score=127.12 Aligned_cols=259 Identities=14% Similarity=0.175 Sum_probs=187.8
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCC-------CeEEEEEcCCC------
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTD-------DTIHLYDLSTS------ 72 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~d-------g~i~iwd~~~~------ 72 (343)
|+.|.+.++..+. . ......|..|.+.|..++-+ ...|+|+..+ -.+-||.+...
T Consensus 39 dNqVhll~~d~e~------s---~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~ 109 (370)
T KOG1007|consen 39 DNQVHLLRLDSEG------S---ELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNS 109 (370)
T ss_pred cceeEEEEecCcc------c---hhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCcccc
Confidence 6777777776521 1 11223344578889888877 5667776542 23779988643
Q ss_pred ---eeeeEec-cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcce-eeeee-----eccccEEEEEEec--
Q 019326 73 ---SSLGAIH-HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL-LTSVK-----VHKKGVNDLAVHH-- 140 (343)
Q Consensus 73 ---~~~~~~~-~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~-----~~~~~v~~i~~~~-- 140 (343)
+++..+. .+ -+.|.|+.|.|++ ..+++-. |..|.+|++..... +..+. .+....++-+|+|
T Consensus 110 ~tlE~v~~Ldtea-vg~i~cvew~Pns-----~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHH 182 (370)
T KOG1007|consen 110 STLECVASLDTEA-VGKINCVEWEPNS-----DKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHH 182 (370)
T ss_pred chhhHhhcCCHHH-hCceeeEEEcCCC-----CeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCC
Confidence 3344444 33 5789999999988 6777665 78999999976654 33332 2445677888988
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceeEEEE--cCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccce-eEEEec-CCcce
Q 019326 141 SGKLALTVGRDDCLAMVNLVRGRRSFYHK--IGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAK-LLCELD-GKKRI 214 (343)
Q Consensus 141 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~-~~~~~~-~~~~i 214 (343)
+++.+++. .|+++..||+++.++...+. +...+..+.|+|+.+++++. .|+.+++||.+..+ +++.+. |..-+
T Consensus 183 dgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWv 261 (370)
T KOG1007|consen 183 DGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWV 261 (370)
T ss_pred ccceEEEe-CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEE
Confidence 66766664 57899999999887665443 45678899999998865554 89999999998654 566665 77889
Q ss_pred EEeeecC--CCeEEEEeCCCcEEEEECCCC-----------------------------ceeEEecccccccEEEEEEEe
Q 019326 215 LCAAPGE--NGVLFTGGEDRSITAWDTNSG-----------------------------KVAYCIEDAHSARVKGIVVLT 263 (343)
Q Consensus 215 ~~~~~~~--~~~l~~~~~dg~i~i~d~~~~-----------------------------~~~~~~~~~h~~~v~~~~~~~ 263 (343)
.++.|.+ +.++++|+.|..|.+|...+- ..+.++. .|...|.+++|+.
T Consensus 262 W~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tyd-ehEDSVY~~aWSs 340 (370)
T KOG1007|consen 262 WAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYD-EHEDSVYALAWSS 340 (370)
T ss_pred EEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhccccccccccccc-ccccceEEEeecc
Confidence 9999984 679999999999999965421 1233555 7999999999997
Q ss_pred cCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 264 KNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 264 ~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
..+ ..+|+-|.||++.|=.+..
T Consensus 341 adP--------WiFASLSYDGRviIs~V~r 362 (370)
T KOG1007|consen 341 ADP--------WIFASLSYDGRVIISSVPR 362 (370)
T ss_pred CCC--------eeEEEeccCceEEeecCCh
Confidence 654 4788999999999877764
No 193
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.81 E-value=1.5e-16 Score=125.19 Aligned_cols=232 Identities=9% Similarity=0.120 Sum_probs=175.7
Q ss_pred CCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC--CeEEEEEC
Q 019326 42 LSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD--GFVSIFDA 117 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d--g~i~iwd~ 117 (343)
...+..+.|+ ...|..|+.|| .++|+............. ...|-.+-|+.. +++..+.+ ..+++++.
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~-~~~IvEmLFSSS-------LvaiV~~~qpr~Lkv~~~ 75 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTE-GVSIVEMLFSSS-------LVAIVSIKQPRKLKVVHF 75 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCC-CeEEEEeecccc-------eeEEEecCCCceEEEEEc
Confidence 3456666687 55677788888 688887765443222323 456777777754 45555554 35999999
Q ss_pred CCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC--CcceEEEEeC--CCCEEEEE---e
Q 019326 118 DPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG--KEASLIKFDG--SGEKFFMV---T 190 (343)
Q Consensus 118 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~---~ 190 (343)
+....+..+. ....|.++.++.+ .|+++-.+ .|+|||+++.+.+.....- .+-..+++++ .+.+++.- .
T Consensus 76 Kk~~~ICe~~-fpt~IL~VrmNr~--RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t 151 (391)
T KOG2110|consen 76 KKKTTICEIF-FPTSILAVRMNRK--RLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTT 151 (391)
T ss_pred ccCceEEEEe-cCCceEEEEEccc--eEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCC
Confidence 8877777776 5668888888765 66666555 4999999999877665543 3333445554 45577665 6
Q ss_pred CCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCc-EEEEECCCCceeEEecccc-cccEEEEEEEecCC
Q 019326 191 EEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRS-ITAWDTNSGKVAYCIEDAH-SARVKGIVVLTKND 266 (343)
Q Consensus 191 ~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~h-~~~v~~~~~~~~~~ 266 (343)
.|.|.+||..+-+....+. |.+++.+++|+ +|.+||++++.|+ ||+|.+.+|+.+.+++.+- ...|.+++|+++.+
T Consensus 152 ~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~ 231 (391)
T KOG2110|consen 152 SGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQ 231 (391)
T ss_pred CceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCC
Confidence 7899999999999998888 99999999999 6789999999987 7899999999999998443 35688999999988
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 267 GGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 267 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+|++.|..++|+||.++...
T Consensus 232 ---------~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 232 ---------FLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred ---------eEEEecCCCeEEEEEecccc
Confidence 99999999999999998653
No 194
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.81 E-value=1.3e-16 Score=133.95 Aligned_cols=261 Identities=10% Similarity=0.121 Sum_probs=169.9
Q ss_pred EEeeCCCeEEEEEcCC-Ce--eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee-CCCeEEEEECC-Ccce--eeeeee
Q 019326 56 ASGGTDDTIHLYDLST-SS--SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS-ADGFVSIFDAD-PFVL--LTSVKV 128 (343)
Q Consensus 56 ~s~~~dg~i~iwd~~~-~~--~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~-~~~~--~~~~~~ 128 (343)
++...++.|.+|++.+ ++ .+..+.. ......++++|++ ++|++++ .++.|.+|+++ +++. +....
T Consensus 6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~~--~~~~~~l~~spd~-----~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~- 77 (330)
T PRK11028 6 IASPESQQIHVWNLNHEGALTLLQVVDV--PGQVQPMVISPDK-----RHLYVGVRPEFRVLSYRIADDGALTFAAESP- 77 (330)
T ss_pred EEcCCCCCEEEEEECCCCceeeeeEEec--CCCCccEEECCCC-----CEEEEEECCCCcEEEEEECCCCceEEeeeec-
Confidence 3446789999999964 32 4444543 3567789999998 6776654 58899999986 3332 22222
Q ss_pred ccccEEEEEEecCCCEEEEEeC-CCeEEEEEccCCc----eeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEccc
Q 019326 129 HKKGVNDLAVHHSGKLALTVGR-DDCLAMVNLVRGR----RSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAED 201 (343)
Q Consensus 129 ~~~~v~~i~~~~~~~~l~~~~~-d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~ 201 (343)
..+....++|+|+++++++++. ++.|.+|++.+.. ..........+..++++|++++++++ .++.|.+||+.+
T Consensus 78 ~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~ 157 (330)
T PRK11028 78 LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD 157 (330)
T ss_pred CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECC
Confidence 2345678999999998888765 8899999997432 12222223456778999999999777 679999999976
Q ss_pred ceeEE-------EecCCcceEEeeecC-CCeEEEEeC-CCcEEEEECCC--Cc--eeEEecccc------cccEEEEEEE
Q 019326 202 AKLLC-------ELDGKKRILCAAPGE-NGVLFTGGE-DRSITAWDTNS--GK--VAYCIEDAH------SARVKGIVVL 262 (343)
Q Consensus 202 ~~~~~-------~~~~~~~i~~~~~~~-~~~l~~~~~-dg~i~i~d~~~--~~--~~~~~~~~h------~~~v~~~~~~ 262 (343)
...+. ..........+.+++ +++++++.. ++.|.+|++.. ++ .+..+. .+ ......+.++
T Consensus 158 ~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~i~~~ 236 (330)
T PRK11028 158 DGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLD-MMPADFSDTRWAADIHIT 236 (330)
T ss_pred CCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEe-cCCCcCCCCccceeEEEC
Confidence 33221 122234456788874 567777665 89999999973 32 233332 11 1223457788
Q ss_pred ecCCCCCCCCCCeEEEEEc-CCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccC-CCCCCCc
Q 019326 263 TKNDGGSTAENPYLVASAS-SDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIG-DSAPKGE 335 (343)
Q Consensus 263 ~~~~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~-~~~~~~~ 335 (343)
|+++ +++++. .++.|.+|+++.... ....+...........+++++++++++.... ++.+..+
T Consensus 237 pdg~---------~lyv~~~~~~~I~v~~i~~~~~-~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~ 301 (330)
T PRK11028 237 PDGR---------HLYACDRTASLISVFSVSEDGS-VLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVY 301 (330)
T ss_pred CCCC---------EEEEecCCCCeEEEEEEeCCCC-eEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEE
Confidence 8776 888875 478999999965321 0111222222334667899999998886554 5544443
No 195
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.81 E-value=2.1e-18 Score=129.57 Aligned_cols=223 Identities=16% Similarity=0.150 Sum_probs=167.5
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEec-CCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeee---
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYP-AHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLG--- 76 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~--- 76 (343)
+|.+|..-|.|++|++.++ .....++ .|...|+.+..- +..|.+-+.|+.+.+|++.-+..+.
T Consensus 27 rL~sg~~~G~V~~w~lqt~------------r~~~~~r~~g~~~it~lq~~p~d~l~tqgRd~~L~lw~ia~s~~i~i~S 94 (323)
T KOG0322|consen 27 RLMSGLSVGIVKMWVLQTE------------RDLPLIRLFGRLFITNLQSIPNDSLDTQGRDPLLILWTIAYSAFISIHS 94 (323)
T ss_pred hhhcccccceEEEEEeecC------------ccchhhhhhccceeeceeecCCcchhhcCCCceEEEEEccCcceEEEee
Confidence 5788999999999999983 2333344 467788888877 7889999999999999987421110
Q ss_pred -----------Ee---------------------------------------ccCCCCCeEEEEEeCCCCCCCCceEEEe
Q 019326 77 -----------AI---------------------------------------HHHESSSVTSLAFYTPQNLSVPRNLFST 106 (343)
Q Consensus 77 -----------~~---------------------------------------~~~~~~~v~~l~~~~~~~~~~~~~l~s~ 106 (343)
.+ ... .+.+.|..+.... ...-++++|
T Consensus 95 i~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~K-lgsvmc~~~~~~c--~s~~lllaG 171 (323)
T KOG0322|consen 95 IVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSK-LGSVMCQDKDHAC--GSTFLLLAG 171 (323)
T ss_pred eeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccc-cCceeeeeccccc--cceEEEEEe
Confidence 00 001 2334444432221 111356778
Q ss_pred eCCCeEEEEECCCcc----------eeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCC--ce--eEEEEc-C
Q 019326 107 SADGFVSIFDADPFV----------LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG--RR--SFYHKI-G 171 (343)
Q Consensus 107 ~~dg~i~iwd~~~~~----------~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~--~~--~~~~~~-~ 171 (343)
-++|.|.+||+.++. .......|..+|.++.+.+....=++++.+..+..|.+... .. ...... .
T Consensus 172 yEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lkn 251 (323)
T KOG0322|consen 172 YESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKN 251 (323)
T ss_pred ccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecC
Confidence 889999999998863 33344568899999999987777788888889999988654 21 122222 3
Q ss_pred CcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecCC-CeEEEEeCCCcEEEEEC
Q 019326 172 KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGEN-GVLFTGGEDRSITAWDT 239 (343)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~dg~i~i~d~ 239 (343)
..+..+.+.||++.++++ -|+.|++|..++.+++..++ |...|++++|+++ +++++++.|++|.+|++
T Consensus 252 pGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 252 PGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 457889999999999999 99999999999999999998 8899999999976 89999999999999986
No 196
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.80 E-value=2.4e-17 Score=130.41 Aligned_cols=225 Identities=13% Similarity=0.177 Sum_probs=169.9
Q ss_pred EecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCe----eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC--C
Q 019326 37 SYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSS----SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD--G 110 (343)
Q Consensus 37 ~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d--g 110 (343)
......++|..++.....|++|-.+|.+.+|..+.+. .+..+..+ ..+..+.-++.. +..+++|+.. .
T Consensus 100 ~~~l~~~~I~gl~~~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g--~g~~~~r~~~~~----p~Iva~GGke~~n 173 (412)
T KOG3881|consen 100 TVSLGTKSIKGLKLADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG--PGLYDVRQTDTD----PYIVATGGKENIN 173 (412)
T ss_pred ccccccccccchhhcCCEEEEEecCCcEEEEeccCCccccccceeeecC--CceeeeccCCCC----CceEecCchhccc
Confidence 3445577888888888889999999999999988543 34455555 667777777766 3567779998 8
Q ss_pred eEEEEECCCcceeeeeeecc---------ccEEEEEEecC--CCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEE
Q 019326 111 FVSIFDADPFVLLTSVKVHK---------KGVNDLAVHHS--GKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKF 179 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~~~---------~~v~~i~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 179 (343)
.+.+||+.+.+.+.+-+.-. -.++++.|.+. ...|++++.-+.+++||.+.++.
T Consensus 174 ~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRR--------------- 238 (412)
T KOG3881|consen 174 ELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRR--------------- 238 (412)
T ss_pred ceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCc---------------
Confidence 99999998875554433211 13556777776 67778888778888888776542
Q ss_pred eCCCCEEEEEeCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEE-ecccccccE
Q 019326 180 DGSGEKFFMVTEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYC-IEDAHSARV 256 (343)
Q Consensus 180 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~h~~~v 256 (343)
++..+. ...+++++... .++.+++|..-|.+..||++.++.+.. +. +-.+.|
T Consensus 239 ------------------------PV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~k-g~tGsi 293 (412)
T KOG3881|consen 239 ------------------------PVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLK-GITGSI 293 (412)
T ss_pred ------------------------ceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccC-CccCCc
Confidence 233333 34566666665 467899999999999999999998888 55 899999
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCc
Q 019326 257 KGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKS 321 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 321 (343)
++|..+|..+ +++++|-|..|||+|+++.+ .+.......+++++-+.++-.
T Consensus 294 rsih~hp~~~---------~las~GLDRyvRIhD~ktrk-----ll~kvYvKs~lt~il~~~~~n 344 (412)
T KOG3881|consen 294 RSIHCHPTHP---------VLASCGLDRYVRIHDIKTRK-----LLHKVYVKSRLTFILLRDDVN 344 (412)
T ss_pred ceEEEcCCCc---------eEEeeccceeEEEeecccch-----hhhhhhhhccccEEEecCCcc
Confidence 9999999988 99999999999999999853 556667778899998876643
No 197
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.80 E-value=3.7e-16 Score=130.96 Aligned_cols=293 Identities=13% Similarity=0.086 Sum_probs=192.8
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
+++-..+|.|.+.|..+ .+.+..+......-..+.|+ ++++++++.||.|.++|+.+.+.+.+++.
T Consensus 9 ~V~~~~~~~v~viD~~t------------~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~ 76 (369)
T PF02239_consen 9 YVVERGSGSVAVIDGAT------------NKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV 76 (369)
T ss_dssp EEEEGGGTEEEEEETTT-------------SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-
T ss_pred EEEecCCCEEEEEECCC------------CeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec
Confidence 45666789999999877 45555665444433446677 78999999999999999999999999987
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEee-CCCeEEEEECCCcceeeeeeec-------cccEEEEEEecCCCEEEEEeC-C
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTS-ADGFVSIFDADPFVLLTSVKVH-------KKGVNDLAVHHSGKLALTVGR-D 151 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~i~~~~~~~~l~~~~~-d 151 (343)
. .....+++++++ ++++++. ..+.+.++|.++.+.++.+... ...+..+..+|....++..-. .
T Consensus 77 G--~~~~~i~~s~DG-----~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~ 149 (369)
T PF02239_consen 77 G--GNPRGIAVSPDG-----KYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDT 149 (369)
T ss_dssp S--SEEEEEEE--TT-----TEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTT
T ss_pred C--CCcceEEEcCCC-----CEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccC
Confidence 6 567889999999 7777665 5899999999999999888643 236778888888876665555 4
Q ss_pred CeEEEEEccCCcee--EEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEec-----CCcceEEee----
Q 019326 152 DCLAMVNLVRGRRS--FYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELD-----GKKRILCAA---- 218 (343)
Q Consensus 152 ~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~-----~~~~i~~~~---- 218 (343)
+.|.+.|....+.+ .............|+|++++++++ ..+.+.++|..+++....+. |+.+...+-
T Consensus 150 ~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~ 229 (369)
T PF02239_consen 150 GEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGF 229 (369)
T ss_dssp TEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTT
T ss_pred CeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCc
Confidence 88888898776543 344556778889999999998876 78899999999998877664 222333221
Q ss_pred ---ec---CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEE----cCCCcEEE
Q 019326 219 ---PG---ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASA----SSDGVICV 288 (343)
Q Consensus 219 ---~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~----~~dg~i~v 288 (343)
|. .+...++.-....+.+||..+.+.++++. ....+ .-+..+|+++ +++.. ...+.|.+
T Consensus 230 g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~-~~G~g-lFi~thP~s~---------~vwvd~~~~~~~~~v~v 298 (369)
T PF02239_consen 230 GPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIP-TQGGG-LFIKTHPDSR---------YVWVDTFLNPDADTVQV 298 (369)
T ss_dssp EEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE--SSSS---EE--TT-S---------EEEEE-TT-SSHT-EEE
T ss_pred ceEEeeccccceecccccCCccccchhhcCeEEEEEE-CCCCc-ceeecCCCCc---------cEEeeccCCCCCceEEE
Confidence 11 22233233333456678999999999999 55556 7888898887 88877 45589999
Q ss_pred EeccCccccCCCcccccccccceeEEEcCCCCceeccccC
Q 019326 289 WDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIG 328 (343)
Q Consensus 289 wd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~ 328 (343)
+|.++.+...... .....++..+.|+++|+.+-....
T Consensus 299 iD~~tl~~~~~i~---~~~~~~~~h~ef~~dG~~v~vS~~ 335 (369)
T PF02239_consen 299 IDKKTLKVVKTIT---PGPGKRVVHMEFNPDGKEVWVSVW 335 (369)
T ss_dssp EECCGTEEEE-HH---HHHT--EEEEEE-TTSSEEEEEEE
T ss_pred EECcCcceeEEEe---ccCCCcEeccEECCCCCEEEEEEe
Confidence 9999874222111 122234899999999996644433
No 198
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.78 E-value=9.3e-19 Score=150.71 Aligned_cols=255 Identities=19% Similarity=0.233 Sum_probs=194.5
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.+++|+.|..++||..++ ..++...+||.+.|+.++.+ ..++++++.|..|++|.+..+.++..+.
T Consensus 204 ~Iitgsdd~lvKiwS~et------------~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLr 271 (1113)
T KOG0644|consen 204 YIITGSDDRLVKIWSMET------------ARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLR 271 (1113)
T ss_pred eEeecCccceeeeeeccc------------hhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHh
Confidence 578999999999999887 56778889999999999998 6678999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee----e-eccccEEEEEEecCCCEEEEEeCCCeE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV----K-VHKKGVNDLAVHHSGKLALTVGRDDCL 154 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~-~~~~~v~~i~~~~~~~~l~~~~~d~~i 154 (343)
+| ++.|++++|+|- .+.+.||++++||.+ ...+... + .....+.++.|-.++..+++++.|+.-
T Consensus 272 gh-tgavtaiafsP~---------~sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea 340 (1113)
T KOG0644|consen 272 GH-TGAVTAIAFSPR---------ASSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEA 340 (1113)
T ss_pred cc-ccceeeeccCcc---------ccCCCCCceEecccc-ccccccCCCCCCcccccceeeeeccccccccccccCCccc
Confidence 99 999999999984 377899999999987 1111111 1 123467778888888899999999988
Q ss_pred EEEEccCCceeEEEEcCCcceEEEEeCC-CCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC--CCeEEEEe
Q 019326 155 AMVNLVRGRRSFYHKIGKEASLIKFDGS-GEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE--NGVLFTGG 229 (343)
Q Consensus 155 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~--~~~l~~~~ 229 (343)
..|.+....... ....-+..+.+ ..+.+++ .+..+.+|++.++.....+. |..++..+.+++ .....+++
T Consensus 341 ~n~e~~~l~~~~-----~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag 415 (1113)
T KOG0644|consen 341 RNHEFEQLAWRS-----NLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAG 415 (1113)
T ss_pred ccchhhHhhhhc-----cceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhcc
Confidence 888764322100 00000111111 1344555 78889999999998887766 677788888874 45777899
Q ss_pred CCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 230 EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 230 ~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.||...|||+-.|.+++....+|. .+..-+|++++. .++....-|.+.|.....+
T Consensus 416 ~dgst~iwdi~eg~pik~y~~gh~-kl~d~kFSqdgt---------s~~lsd~hgql~i~g~gqs 470 (1113)
T KOG0644|consen 416 YDGSTIIWDIWEGIPIKHYFIGHG-KLVDGKFSQDGT---------SIALSDDHGQLYILGTGQS 470 (1113)
T ss_pred CCCceEeeecccCCcceeeecccc-eeeccccCCCCc---------eEecCCCCCceEEeccCCC
Confidence 999999999999998888775654 445567888877 7777777788888877654
No 199
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.78 E-value=4.6e-16 Score=135.11 Aligned_cols=266 Identities=12% Similarity=0.139 Sum_probs=193.5
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
-+++|..||.|.+|.--... ... .....+.-|...|++++|+ |.+|++|+..|.+.+|.+.+++ .+-+.
T Consensus 219 ~~Aa~d~dGrI~vw~d~~~~-----~~~---~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLP 289 (792)
T KOG1963|consen 219 YLAAGDSDGRILVWRDFGSS-----DDS---ETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLP 289 (792)
T ss_pred eEEEeccCCcEEEEeccccc-----ccc---ccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-ccccc
Confidence 47899999999999754311 122 2334455699999999999 9999999999999999999988 33334
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeec-----------cccEEEEEEecCCCEEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVH-----------KKGVNDLAVHHSGKLALTV 148 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~i~~~~~~~~l~~~ 148 (343)
.- .++|..+.++|++ .+.+....|+.|.+....+.+...++.+- .+-.+.++++|.-+.++-.
T Consensus 290 RL-gs~I~~i~vS~ds-----~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln 363 (792)
T KOG1963|consen 290 RL-GSPILHIVVSPDS-----DLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLN 363 (792)
T ss_pred cc-CCeeEEEEEcCCC-----CeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeec
Confidence 34 7999999999999 78888899999999988666555444432 3446778899977888889
Q ss_pred eCCCeEEEEEccCCceeEEEEc------C------CcceEEEEeCCCCEEEEEe---------C--CcEEEEEcccce--
Q 019326 149 GRDDCLAMVNLVRGRRSFYHKI------G------KEASLIKFDGSGEKFFMVT---------E--EKVGIHQAEDAK-- 203 (343)
Q Consensus 149 ~~d~~i~~wd~~~~~~~~~~~~------~------~~~~~~~~~~~~~~~~~~~---------~--~~i~~~d~~~~~-- 203 (343)
+..|.|.+||+-+...+..... . ..+..++.+..|.++++.. + ..++.|......
T Consensus 364 ~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt 443 (792)
T KOG1963|consen 364 GHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKT 443 (792)
T ss_pred CCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcce
Confidence 9999999999988776544332 1 1244566677788888872 1 236677554332
Q ss_pred --eEEEec--CCcceEEeeec--CC-CeEEEEeCCCcEEEEECCCCc----------eeEEecccccccEEEEEEEecCC
Q 019326 204 --LLCELD--GKKRILCAAPG--EN-GVLFTGGEDRSITAWDTNSGK----------VAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 204 --~~~~~~--~~~~i~~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~----------~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
+...+. |...+...++. .. ..+++++.||.+++|-+...+ +...-. .|..++++++|+.+|.
T Consensus 444 ~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~s-y~k~~i~a~~fs~dGs 522 (792)
T KOG1963|consen 444 FILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGS-YHKTPITALCFSQDGS 522 (792)
T ss_pred eEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeec-cccCcccchhhcCCCc
Confidence 223332 65555555554 22 388999999999999884322 111112 4788999999999984
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 267 GGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 267 ~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
+++.+.|++|.+||..+
T Consensus 523 ----------lla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 523 ----------LLAVSFDDTITIWDYDT 539 (792)
T ss_pred ----------EEEEecCCEEEEecCCC
Confidence 88888899999999998
No 200
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.77 E-value=2e-16 Score=122.12 Aligned_cols=232 Identities=19% Similarity=0.254 Sum_probs=170.7
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecccc--EEEEEEecCCCEEEEEe-C------CCeE
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKG--VNDLAVHHSGKLALTVG-R------DDCL 154 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--v~~i~~~~~~~~l~~~~-~------d~~i 154 (343)
....+++|+.+. ..++.|..+| .+||+.+..+.....+.+.+. +.-+-|- .++|+..+ . -+.+
T Consensus 6 ~~~lsvs~NQD~-----ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR--~N~laLVGGg~~pky~pNkv 77 (346)
T KOG2111|consen 6 PKTLSVSFNQDH-----SCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFR--SNYLALVGGGSRPKYPPNKV 77 (346)
T ss_pred CceeEEEEccCC-----ceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhh--hceEEEecCCCCCCCCCceE
Confidence 455669999987 5666666655 799999875544333333332 2222232 33444333 2 2579
Q ss_pred EEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcc-cceeEEEec---CCcceEEeeecCC-CeEEE-E
Q 019326 155 AMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAE-DAKLLCELD---GKKRILCAAPGEN-GVLFT-G 228 (343)
Q Consensus 155 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~---~~~~i~~~~~~~~-~~l~~-~ 228 (343)
.|||=...+++.......+|..+.+.+ ..+++..++.|.+|... +.+.++.+. .+..+.+++...+ .+|+. |
T Consensus 78 iIWDD~k~~~i~el~f~~~I~~V~l~r--~riVvvl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg 155 (346)
T KOG2111|consen 78 IIWDDLKERCIIELSFNSEIKAVKLRR--DRIVVVLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPG 155 (346)
T ss_pred EEEecccCcEEEEEEeccceeeEEEcC--CeEEEEecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCC
Confidence 999988888889999999999999975 57888899999999988 566666665 3455666666533 34443 5
Q ss_pred eCCCcEEEEECCCCce--eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCc-EEEEeccCccccCCCccccc
Q 019326 229 GEDRSITAWDTNSGKV--AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGV-ICVWDVRMAIKEKPLPLAEA 305 (343)
Q Consensus 229 ~~dg~i~i~d~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~-i~vwd~~~~~~~~~~~~~~~ 305 (343)
-.-|.|+|-|+...+. ...+. +|...|.+++.+.++. ++||+|..|+ |||||..++.+.. .+...
T Consensus 156 ~k~GqvQi~dL~~~~~~~p~~I~-AH~s~Iacv~Ln~~Gt---------~vATaStkGTLIRIFdt~~g~~l~--E~RRG 223 (346)
T KOG2111|consen 156 FKTGQVQIVDLASTKPNAPSIIN-AHDSDIACVALNLQGT---------LVATASTKGTLIRIFDTEDGTLLQ--ELRRG 223 (346)
T ss_pred CccceEEEEEhhhcCcCCceEEE-cccCceeEEEEcCCcc---------EEEEeccCcEEEEEEEcCCCcEee--eeecC
Confidence 5679999999986655 46777 9999999999999988 9999999997 7999999986444 33445
Q ss_pred ccccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 306 KTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 306 ~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
.....|.|++|||+..+++..+.++.++.+..
T Consensus 224 ~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l 255 (346)
T KOG2111|consen 224 VDRADIYCIAFSPNSSWLAVSSDKGTLHIFSL 255 (346)
T ss_pred CchheEEEEEeCCCccEEEEEcCCCeEEEEEe
Confidence 55668999999999999999999997765443
No 201
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.77 E-value=2.5e-16 Score=141.18 Aligned_cols=252 Identities=15% Similarity=0.121 Sum_probs=180.2
Q ss_pred ceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCC-------eeeeEeccCCCCCeEEEEEeCCCCCC
Q 019326 29 TLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTS-------SSLGAIHHHESSSVTSLAFYTPQNLS 98 (343)
Q Consensus 29 ~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~l~~~~~~~~~ 98 (343)
..+...+..+..|...|..++.+ +.+|+||+.||+|++||+..- +...++... ...+.++...+.+
T Consensus 1035 ~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~-~sr~~~vt~~~~~--- 1110 (1431)
T KOG1240|consen 1035 NPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPE-GSRVEKVTMCGNG--- 1110 (1431)
T ss_pred CccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEecc-CCceEEEEeccCC---
Confidence 44567788888899999999988 589999999999999998642 233344434 6889999999998
Q ss_pred CCceEEEeeCCCeEEEEECCCc--c-----eeeeeeecc-ccEEEE-EEecC-C-CEEEEEeCCCeEEEEEccCCceeEE
Q 019326 99 VPRNLFSTSADGFVSIFDADPF--V-----LLTSVKVHK-KGVNDL-AVHHS-G-KLALTVGRDDCLAMVNLVRGRRSFY 167 (343)
Q Consensus 99 ~~~~l~s~~~dg~i~iwd~~~~--~-----~~~~~~~~~-~~v~~i-~~~~~-~-~~l~~~~~d~~i~~wd~~~~~~~~~ 167 (343)
+.+|.++.||.|++.+++.. + +.+....+. +.+.++ +|... + ..++.+...+.|..||+++......
T Consensus 1111 --~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~ 1188 (1431)
T KOG1240|consen 1111 --DQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWR 1188 (1431)
T ss_pred --CeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHh
Confidence 79999999999999998652 1 112222222 233333 34332 2 3777888889999999998776554
Q ss_pred EEc---CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec--CCcceEEeeec--CC--CeEEE-Ee-CCCcEE
Q 019326 168 HKI---GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD--GKKRILCAAPG--EN--GVLFT-GG-EDRSIT 235 (343)
Q Consensus 168 ~~~---~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~--~~--~~l~~-~~-~dg~i~ 235 (343)
... .+.+++++.+|.+++++.| ..|.+.+||++-+.++.... +..++..+..+ .. ...++ ++ ..+.|.
T Consensus 1189 lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs 1268 (1431)
T KOG1240|consen 1189 LKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVS 1268 (1431)
T ss_pred hhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCcee
Confidence 443 3679999999999999999 99999999999998888776 45667766665 22 44444 44 578899
Q ss_pred EEECCCCceeEEecccccc------------------cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 236 AWDTNSGKVAYCIEDAHSA------------------RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 236 i~d~~~~~~~~~~~~~h~~------------------~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+|++.+|..-..+..+... ......+...+ .++++|+.|..||.||...+.
T Consensus 1269 ~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~---------~~~ltggsd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1269 TWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKN---------GFLLTGGSDMKIRKWDPTRPE 1337 (1431)
T ss_pred eeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCC---------ceeeecCCccceeeccCCCcc
Confidence 9999998766655512011 11111111122 289999999999999998763
No 202
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.77 E-value=1.2e-16 Score=138.20 Aligned_cols=229 Identities=11% Similarity=0.043 Sum_probs=159.1
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCC---CeEEEEEcCCCee--eeEeccC
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTD---DTIHLYDLSTSSS--LGAIHHH 81 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~d---g~i~iwd~~~~~~--~~~~~~~ 81 (343)
+..|++||... . . ...+..|...+.+.+|+ |+.|+.++.+ ..|++||+.+++. +..+.+
T Consensus 183 ~~~i~i~d~dg-------~-----~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g- 248 (429)
T PRK01742 183 PYEVRVADYDG-------F-----N-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRG- 248 (429)
T ss_pred eEEEEEECCCC-------C-----C-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCC-
Confidence 46889998865 1 1 23345678889999999 7888877653 4699999988754 333333
Q ss_pred CCCCeEEEEEeCCCCCCCCceEEEe-eCCCeEEEE--ECCCcceeeeeeeccccEEEEEEecCCCEEEEEe-CCCeEEEE
Q 019326 82 ESSSVTSLAFYTPQNLSVPRNLFST-SADGFVSIF--DADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVG-RDDCLAMV 157 (343)
Q Consensus 82 ~~~~v~~l~~~~~~~~~~~~~l~s~-~~dg~i~iw--d~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-~d~~i~~w 157 (343)
.....+|+|++ +.|+.+ +.+|.+.|| |+.+++ ...+..+...+....|+|+|+.|+.++ .++...+|
T Consensus 249 ---~~~~~~wSPDG-----~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~ 319 (429)
T PRK01742 249 ---HNGAPAFSPDG-----SRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVY 319 (429)
T ss_pred ---ccCceeECCCC-----CEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEE
Confidence 34468999999 666665 467865555 666654 445555667788999999998777655 57888888
Q ss_pred EccCCc-eeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEE
Q 019326 158 NLVRGR-RSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSIT 235 (343)
Q Consensus 158 d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~ 235 (343)
++.... ......... ....|+|+++.++......+.+||+.+++....... .......|+ ++++++.++.++.+.
T Consensus 320 ~~~~~~~~~~~l~~~~--~~~~~SpDG~~ia~~~~~~i~~~Dl~~g~~~~lt~~-~~~~~~~~sPdG~~i~~~s~~g~~~ 396 (429)
T PRK01742 320 RMSASGGGASLVGGRG--YSAQISADGKTLVMINGDNVVKQDLTSGSTEVLSST-FLDESPSISPNGIMIIYSSTQGLGK 396 (429)
T ss_pred EEECCCCCeEEecCCC--CCccCCCCCCEEEEEcCCCEEEEECCCCCeEEecCC-CCCCCceECCCCCEEEEEEcCCCce
Confidence 765422 122222222 457899999999888556677799988865433222 223456677 467888888888888
Q ss_pred EEEC--CCCceeEEecccccccEEEEEEEec
Q 019326 236 AWDT--NSGKVAYCIEDAHSARVKGIVVLTK 264 (343)
Q Consensus 236 i~d~--~~~~~~~~~~~~h~~~v~~~~~~~~ 264 (343)
+|++ .+++....+. .|.+.+...+|+|.
T Consensus 397 ~l~~~~~~G~~~~~l~-~~~g~~~~p~wsp~ 426 (429)
T PRK01742 397 VLQLVSADGRFKARLP-GSDGQVKFPAWSPY 426 (429)
T ss_pred EEEEEECCCCceEEcc-CCCCCCCCcccCCC
Confidence 8875 3578888887 88888888999875
No 203
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.1e-16 Score=141.47 Aligned_cols=232 Identities=15% Similarity=0.176 Sum_probs=165.0
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCC----CCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAH----LSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLG 76 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~ 76 (343)
|++|+.||.|+||+--.... .+..-......+.++ .+.=.-+.|. ..+|+++|.-..|+|||........
T Consensus 1126 lLtas~dGvIRIwk~y~~~~----~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~ 1201 (1387)
T KOG1517|consen 1126 LLTASSDGVIRIWKDYADKW----KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVA 1201 (1387)
T ss_pred eeeeccCceEEEeccccccc----CCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEe
Confidence 68999999999998644210 011111111222222 1111334565 4556666657899999999988888
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc---ceeeeeeecccc--EEEEEEecCC-CEEEEEeC
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF---VLLTSVKVHKKG--VNDLAVHHSG-KLALTVGR 150 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~--v~~i~~~~~~-~~l~~~~~ 150 (343)
.+.......|+++.-.... ++.+++|..||.|++||.+.. ..+...+.|+.. |..+.+.++| ..|++|+.
T Consensus 1202 diP~~s~t~vTaLS~~~~~----gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~ 1277 (1387)
T KOG1517|consen 1202 DIPYGSSTLVTALSADLVH----GNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQ 1277 (1387)
T ss_pred ecccCCCccceeecccccC----CceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeecc
Confidence 7765546778888665443 379999999999999998643 356777888886 9999999977 45999999
Q ss_pred CCeEEEEEccCCceeEE------EEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec--------CCcceEE
Q 019326 151 DDCLAMVNLVRGRRSFY------HKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD--------GKKRILC 216 (343)
Q Consensus 151 d~~i~~wd~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--------~~~~i~~ 216 (343)
||.|++||++....... ...+...+++..++....+++++.+.|+||++...+. ..+. ....+.|
T Consensus 1278 ~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~q~ikIy~~~G~~l-~~~k~n~~F~~q~~gs~sc 1356 (1387)
T KOG1517|consen 1278 DGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSAQLIKIYSLSGEQL-NIIKYNPGFMGQRIGSVSC 1356 (1387)
T ss_pred CCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCcceEEEEecChhhh-cccccCcccccCcCCCcce
Confidence 99999999998432211 1123458999999999999999669999999865432 2221 2356799
Q ss_pred eeecCCC-eEEEEeCCCcEEEEECCCCc
Q 019326 217 AAPGENG-VLFTGGEDRSITAWDTNSGK 243 (343)
Q Consensus 217 ~~~~~~~-~l~~~~~dg~i~i~d~~~~~ 243 (343)
++|++-. ++++|+.|..|.||...+..
T Consensus 1357 L~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1357 LAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred eeecchhHhhhhccCCceEEEeecCCcC
Confidence 9999765 77888999999999877553
No 204
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.76 E-value=2.2e-16 Score=121.93 Aligned_cols=198 Identities=13% Similarity=0.140 Sum_probs=163.8
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC---cceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP---FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
..+|+|.+|+++. ..++.+.....|.||.... .+..+++..|...|+.++|.|..+.|++++.|..-++|..
T Consensus 10 ~~pitchAwn~dr-----t~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~ 84 (361)
T KOG1523|consen 10 LEPITCHAWNSDR-----TQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ 84 (361)
T ss_pred cCceeeeeecCCC-----ceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence 5789999999999 7899999999999998754 4578899999999999999999999999999999999998
Q ss_pred cCC-c---eeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEE-----EecCCcceEEeeecCCC-eEEEE
Q 019326 160 VRG-R---RSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLC-----ELDGKKRILCAAPGENG-VLFTG 228 (343)
Q Consensus 160 ~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~-----~~~~~~~i~~~~~~~~~-~l~~~ 228 (343)
..+ + .+....+...+.++.|+|.++.|+++ ....|.++-.+...... ..++...|+++.|++++ ++++|
T Consensus 85 ~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaG 164 (361)
T KOG1523|consen 85 PSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAG 164 (361)
T ss_pred CCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceeccc
Confidence 443 2 34566778999999999999999999 78888888877655442 22366789999999665 77888
Q ss_pred eCCCcEEEEECC-----C-------------CceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 229 GEDRSITAWDTN-----S-------------GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 229 ~~dg~i~i~d~~-----~-------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
+.|+..++|..- . |+.+.++. ...+.|..+.|+|.+. .|+-.+.|+.+.+=|
T Consensus 165 s~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~-~~ggwvh~v~fs~sG~---------~lawv~Hds~v~~~d 234 (361)
T KOG1523|consen 165 STDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS-SSGGWVHGVLFSPSGN---------RLAWVGHDSTVSFVD 234 (361)
T ss_pred ccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc-cCCCceeeeEeCCCCC---------EeeEecCCCceEEee
Confidence 999999999642 1 23334443 5678899999999988 999999999999999
Q ss_pred ccCcc
Q 019326 291 VRMAI 295 (343)
Q Consensus 291 ~~~~~ 295 (343)
...+.
T Consensus 235 a~~p~ 239 (361)
T KOG1523|consen 235 AAGPS 239 (361)
T ss_pred cCCCc
Confidence 88763
No 205
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.75 E-value=2.4e-15 Score=118.26 Aligned_cols=266 Identities=15% Similarity=0.099 Sum_probs=181.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCC----ee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTS----SS 74 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~----~~ 74 (343)
.++++..|..|++|+-.... ...+.. .....|+|++|- +..|+.|+..| |.+|..... +.
T Consensus 112 ~fava~nddvVriy~ksst~----------pt~Lks--~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~ 178 (445)
T KOG2139|consen 112 AFAVATNDDVVRIYDKSSTC----------PTKLKS--VSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRN 178 (445)
T ss_pred hhhhhccCcEEEEeccCCCC----------Cceecc--hhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccccc
Confidence 46889999999999976511 111111 235679999997 67888888866 999987531 11
Q ss_pred ----------eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-CCeEEEEECCCcceeeeeeeccccEEEEEEecCCC
Q 019326 75 ----------LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGK 143 (343)
Q Consensus 75 ----------~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~ 143 (343)
+..-.+| .+|++|.|.+++ ..+++++. |..|.|||.+++..+.......+.+.-+.|+||+.
T Consensus 179 ~~~~s~~~~qvl~~pgh--~pVtsmqwn~dg-----t~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd 251 (445)
T KOG2139|consen 179 IRMMSTHHLQVLQDPGH--NPVTSMQWNEDG-----TILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGD 251 (445)
T ss_pred cccccccchhheeCCCC--ceeeEEEEcCCC-----CEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCC
Confidence 1122344 799999999999 67887776 67899999999877666544567888999999999
Q ss_pred EEEEEeCCCeEEEEEccC-CceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccce---------------eEEE
Q 019326 144 LALTVGRDDCLAMVNLVR-GRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAK---------------LLCE 207 (343)
Q Consensus 144 ~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---------------~~~~ 207 (343)
+|+++.-|+..++|+... .....-.-..+.+...+|+|.|..++.+..+.-++|.+.-.. ++..
T Consensus 252 ~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaD 331 (445)
T KOG2139|consen 252 VLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIAD 331 (445)
T ss_pred EEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeecc
Confidence 999999999999995433 333334444568899999999999998877777777654211 1111
Q ss_pred ec------C----CcceEEeeecC-CCeEEEEeCCC--------cEEEEECCCCceeEEecc--cccccEEEEEEEecCC
Q 019326 208 LD------G----KKRILCAAPGE-NGVLFTGGEDR--------SITAWDTNSGKVAYCIED--AHSARVKGIVVLTKND 266 (343)
Q Consensus 208 ~~------~----~~~i~~~~~~~-~~~l~~~~~dg--------~i~i~d~~~~~~~~~~~~--~h~~~v~~~~~~~~~~ 266 (343)
+. . .+++.+++|++ +.+|++.-..+ .|.+||.+..-++.-... ........+.|++..+
T Consensus 332 L~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n 411 (445)
T KOG2139|consen 332 LQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKN 411 (445)
T ss_pred chhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeeeccc
Confidence 11 1 36688899984 67887765443 367788775443332210 1122355667776643
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 267 GGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 267 ~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
++.+|..+=..|.+.-|++.-
T Consensus 412 ------~g~lLsiaWsTGriq~ypl~f 432 (445)
T KOG2139|consen 412 ------EGRLLSIAWSTGRIQRYPLTF 432 (445)
T ss_pred ------CCcEEEEEeccCceEeeeeEE
Confidence 334677777778888887754
No 206
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.75 E-value=7.2e-15 Score=113.64 Aligned_cols=232 Identities=11% Similarity=0.130 Sum_probs=162.5
Q ss_pred CeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCC-CCCeEEEEEeCCCCCCCCceEEEeeCC------CeEEE
Q 019326 44 PITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHE-SSSVTSLAFYTPQNLSVPRNLFSTSAD------GFVSI 114 (343)
Q Consensus 44 ~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~~~~~~l~s~~~d------g~i~i 114 (343)
...+++|+ ..-+++|..+| .+||+.+--+.....+.+. .-.+..+-|..+- +.+.|+.+ +.|.|
T Consensus 7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~------laLVGGg~~pky~pNkviI 79 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNY------LALVGGGSRPKYPPNKVII 79 (346)
T ss_pred ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhce------EEEecCCCCCCCCCceEEE
Confidence 34458888 45666666666 8999987544332222220 1223333343322 33344443 47999
Q ss_pred EECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccC-CceeEEEEcCC-cceEEEEeCC--CCEEEEE-
Q 019326 115 FDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR-GRRSFYHKIGK-EASLIKFDGS--GEKFFMV- 189 (343)
Q Consensus 115 wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~- 189 (343)
||-...+++.++. ...+|.++.+.++ .+++.- .+.|++|.... .+.+....... +-..+++.|. ...++.-
T Consensus 80 WDD~k~~~i~el~-f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg 155 (346)
T KOG2111|consen 80 WDDLKERCIIELS-FNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPG 155 (346)
T ss_pred EecccCcEEEEEE-eccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCC
Confidence 9976777787777 6789999999877 555543 57899999874 44444444332 2223444443 3333333
Q ss_pred -eCCcEEEEEccccee---EEEecCCcceEEeeec-CCCeEEEEeCCCc-EEEEECCCCceeEEeccc-ccccEEEEEEE
Q 019326 190 -TEEKVGIHQAEDAKL---LCELDGKKRILCAAPG-ENGVLFTGGEDRS-ITAWDTNSGKVAYCIEDA-HSARVKGIVVL 262 (343)
Q Consensus 190 -~~~~i~~~d~~~~~~---~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~-h~~~v~~~~~~ 262 (343)
.-|.+.+.|+...+. .....|...|.|++.. +|.++|+++..|+ |||||..+|+.+.+++.+ ....|.+|+|+
T Consensus 156 ~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFS 235 (346)
T KOG2111|consen 156 FKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFS 235 (346)
T ss_pred CccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeC
Confidence 578999999987665 4444599999999998 7889999999998 799999999999999854 34689999999
Q ss_pred ecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 263 TKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 263 ~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
|+.. +|+.+|..|+|+||.++...
T Consensus 236 p~~s---------~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 236 PNSS---------WLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred CCcc---------EEEEEcCCCeEEEEEeecCC
Confidence 9988 99999999999999998743
No 207
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.74 E-value=5.9e-16 Score=133.94 Aligned_cols=232 Identities=13% Similarity=0.070 Sum_probs=152.1
Q ss_pred CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC---CeEEEEECCCcce--eeeeeeccccEEE
Q 019326 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD---GFVSIFDADPFVL--LTSVKVHKKGVND 135 (343)
Q Consensus 61 dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~--~~~~~~~~~~v~~ 135 (343)
+..|.+||.+... ...+..+ ...+....|+|++ +.|+.++.+ ..|++||+.+++. +..+.+ ....
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~-~~~v~~p~wSPDG-----~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g---~~~~ 252 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRS-SQPLMSPAWSPDG-----SKLAYVSFENKKSQLVVHDLRSGARKVVASFRG---HNGA 252 (429)
T ss_pred eEEEEEECCCCCC-ceEeccC-CCccccceEcCCC-----CEEEEEEecCCCcEEEEEeCCCCceEEEecCCC---ccCc
Confidence 4689999987554 4556666 6789999999999 778776653 3799999987653 333333 3446
Q ss_pred EEEecCCCEEEEEe-CCCeEEE--EEccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccc-eeEEEec
Q 019326 136 LAVHHSGKLALTVG-RDDCLAM--VNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDA-KLLCELD 209 (343)
Q Consensus 136 i~~~~~~~~l~~~~-~d~~i~~--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~-~~~~~~~ 209 (343)
++|+|+|+.|+.++ .+|.+.+ ||+.+++..........+....|+|+++.++.+ .++...+|++... .....+.
T Consensus 253 ~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~ 332 (429)
T PRK01742 253 PAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVG 332 (429)
T ss_pred eeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEec
Confidence 89999999888765 5776555 466666654444444567789999999987766 4677888876532 2223333
Q ss_pred CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEE
Q 019326 210 GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICV 288 (343)
Q Consensus 210 ~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~v 288 (343)
+.. .+..|+ +++.++..+.++ +.+||+.+++...... .+ ....+.|+|++. +|+.++.++.+.+
T Consensus 333 ~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~-~~--~~~~~~~sPdG~---------~i~~~s~~g~~~~ 397 (429)
T PRK01742 333 GRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSS-TF--LDESPSISPNGI---------MIIYSSTQGLGKV 397 (429)
T ss_pred CCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecC-CC--CCCCceECCCCC---------EEEEEEcCCCceE
Confidence 332 345677 456777776654 6669998887543222 22 234566777776 9999999999998
Q ss_pred EeccCccccCCCcccccccccceeEEEcCCC
Q 019326 289 WDVRMAIKEKPLPLAEAKTNSRLTCLAGSST 319 (343)
Q Consensus 289 wd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 319 (343)
|.+..........+. .+.+.+...+|+|-
T Consensus 398 l~~~~~~G~~~~~l~--~~~g~~~~p~wsp~ 426 (429)
T PRK01742 398 LQLVSADGRFKARLP--GSDGQVKFPAWSPY 426 (429)
T ss_pred EEEEECCCCceEEcc--CCCCCCCCcccCCC
Confidence 887432111111121 22345777788764
No 208
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.74 E-value=4e-18 Score=137.61 Aligned_cols=216 Identities=17% Similarity=0.198 Sum_probs=179.1
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR 163 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~ 163 (343)
-.-..+.++.+| +.++.|+..|.|..+|..++++...+. -...|.++.|..+.++++++ ....+++||- .|.
T Consensus 130 FGPY~~~ytrnG-----rhlllgGrKGHlAa~Dw~t~~L~~Ei~-v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~-~Gt 201 (545)
T KOG1272|consen 130 FGPYHLDYTRNG-----RHLLLGGRKGHLAAFDWVTKKLHFEIN-VMETVRDVTFLHNEQFFAVA-QKKYVYVYDN-NGT 201 (545)
T ss_pred cCCeeeeecCCc-----cEEEecCCccceeeeecccceeeeeee-hhhhhhhhhhhcchHHHHhh-hhceEEEecC-CCc
Confidence 345678899998 899999999999999999999888887 35678999999887776665 5678999994 566
Q ss_pred eeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECC
Q 019326 164 RSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTN 240 (343)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~ 240 (343)
.+........+..+.|.|.--+|+++ ..|.+..-|+.+|+.+..+. ..+.+..+.-.| +..+-+|...|+|.+|...
T Consensus 202 ElHClk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~ 281 (545)
T KOG1272|consen 202 ELHCLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPN 281 (545)
T ss_pred EEeehhhcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCC
Confidence 77777777889999999999888888 88999999999999998887 556677777665 4577889999999999999
Q ss_pred CCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCC
Q 019326 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTK 320 (343)
Q Consensus 241 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 320 (343)
..+++..+. .|.++|.+|++.+.+. +++|.+.|..++|||+++-. .+..+....+...+++|.-+
T Consensus 282 skePLvKiL-cH~g~V~siAv~~~G~---------YMaTtG~Dr~~kIWDlR~~~-----ql~t~~tp~~a~~ls~Sqkg 346 (545)
T KOG1272|consen 282 SKEPLVKIL-CHRGPVSSIAVDRGGR---------YMATTGLDRKVKIWDLRNFY-----QLHTYRTPHPASNLSLSQKG 346 (545)
T ss_pred CcchHHHHH-hcCCCcceEEECCCCc---------EEeecccccceeEeeecccc-----ccceeecCCCcccccccccc
Confidence 999999988 9999999999999988 99999999999999999864 23333334456667776555
Q ss_pred ce
Q 019326 321 SF 322 (343)
Q Consensus 321 ~~ 322 (343)
.+
T Consensus 347 lL 348 (545)
T KOG1272|consen 347 LL 348 (545)
T ss_pred ce
Confidence 44
No 209
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.74 E-value=2.2e-16 Score=130.03 Aligned_cols=206 Identities=10% Similarity=0.115 Sum_probs=164.1
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccc
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKK 131 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 131 (343)
.+.|+.++.||.+.+.+ +.++....+..| .+.+.+-.|+|+| .-|++++.||.|++|.-.. -+..++.....
T Consensus 75 ~d~~~i~s~DGkf~il~-k~~rVE~sv~AH-~~A~~~gRW~~dG-----tgLlt~GEDG~iKiWSrsG-MLRStl~Q~~~ 146 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILN-KSARVERSISAH-AAAISSGRWSPDG-----AGLLTAGEDGVIKIWSRSG-MLRSTVVQNEE 146 (737)
T ss_pred cceEEEEcCCceEEEec-ccchhhhhhhhh-hhhhhhcccCCCC-----ceeeeecCCceEEEEeccc-hHHHHHhhcCc
Confidence 35788899999999987 457888888999 9999999999999 7899999999999998543 44455555677
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCce-eEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec
Q 019326 132 GVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR-SFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD 209 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~ 209 (343)
+|.|++|.|+.+-++-+. .+.+.+=-+..+.. +.-..+.+-+.++.|++..+.++++ .|-..++||.....+...-.
T Consensus 147 ~v~c~~W~p~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~ 225 (737)
T KOG1524|consen 147 SIRCARWAPNSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAA 225 (737)
T ss_pred eeEEEEECCCCCceEEec-CCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccccCCh
Confidence 999999999886555443 35677666665544 4455567889999999999999999 99999999988777777777
Q ss_pred CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEE
Q 019326 210 GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICV 288 (343)
Q Consensus 210 ~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~v 288 (343)
|..+|++++|.++..++.++.. +++ +.....+.|..++|++++. .++.|+..|.+.+
T Consensus 226 ~ey~ITSva~npd~~~~v~S~n-t~R------------~~~p~~GSifnlsWS~DGT---------Q~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 226 EEYAITSVAFNPEKDYLLWSYN-TAR------------FSSPRVGSIFNLSWSADGT---------QATCGTSTGQLIV 282 (737)
T ss_pred hccceeeeeeccccceeeeeee-eee------------ecCCCccceEEEEEcCCCc---------eeeccccCceEEE
Confidence 9999999999987766666532 333 4335678899999999988 8888888887655
No 210
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.74 E-value=1.5e-15 Score=117.39 Aligned_cols=218 Identities=12% Similarity=0.116 Sum_probs=174.2
Q ss_pred CCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC---eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEE
Q 019326 41 HLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS---SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIF 115 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 115 (343)
-..+|+|.+|+ ...+|.+.....|.||..... +..+++..| ...|+.+.|.|.. +.|++++.|..-++|
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~H-d~~vtgvdWap~s-----nrIvtcs~drnayVw 82 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEH-DKIVTGVDWAPKS-----NRIVTCSHDRNAYVW 82 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhh-CcceeEEeecCCC-----CceeEccCCCCcccc
Confidence 45799999999 788999999999999988765 467788889 9999999999998 799999999999999
Q ss_pred EC-C--CcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCcee-----EEEEcCCcceEEEEeCCCCEEE
Q 019326 116 DA-D--PFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRS-----FYHKIGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 116 d~-~--~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
.. . +.++...+..++..++++.|+|.++.|++|+.-..|.+|-++...-= ....+...|.++.|+|++-.++
T Consensus 83 ~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLla 162 (361)
T KOG1523|consen 83 TQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLA 162 (361)
T ss_pred ccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceec
Confidence 98 3 34566667779999999999999999999999999999988765532 2334457789999999999999
Q ss_pred EE-eCCcEEEEEccc------------------ceeEEEe-cCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCc-ee
Q 019326 188 MV-TEEKVGIHQAED------------------AKLLCEL-DGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGK-VA 245 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~------------------~~~~~~~-~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~-~~ 245 (343)
++ .|+.+++|..-- ++++.++ ...+.+..+.|+ .++.|+-.+.|..+.+-|..... .+
T Consensus 163 aGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v 242 (361)
T KOG1523|consen 163 AGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERV 242 (361)
T ss_pred ccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhc
Confidence 99 899999986421 1223333 245678899998 47889989999999999987664 34
Q ss_pred EEecccccccEEEEEEEecC
Q 019326 246 YCIEDAHSARVKGIVVLTKN 265 (343)
Q Consensus 246 ~~~~~~h~~~v~~~~~~~~~ 265 (343)
..+...+ .+..++.|-...
T Consensus 243 ~~~~~~~-lP~ls~~~ise~ 261 (361)
T KOG1523|consen 243 QSVATAQ-LPLLSVSWISEN 261 (361)
T ss_pred cchhhcc-CCceeeEeecCC
Confidence 4444233 677777776665
No 211
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.74 E-value=5.4e-17 Score=131.95 Aligned_cols=250 Identities=17% Similarity=0.208 Sum_probs=184.1
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
+.....+..|.+.|+.|.|+ |..|++|+.|..|.+||..+++....+...|...|..-.|.|... ...+++++.|
T Consensus 132 ~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~---d~ti~~~s~d 208 (559)
T KOG1334|consen 132 LRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSG---DRTIVTSSRD 208 (559)
T ss_pred hhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCC---CcCceecccc
Confidence 34455677899999999999 999999999999999999999888777654477888878888763 3689999999
Q ss_pred CeEEEEECCC-cce--eeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEE-----------------
Q 019326 110 GFVSIFDADP-FVL--LTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYH----------------- 168 (343)
Q Consensus 110 g~i~iwd~~~-~~~--~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~----------------- 168 (343)
|.|++=.+.. +.+ ...+..|.++|.-++..|+. ..|.+++.|+.+.-+|++.+......
T Consensus 209 gqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia 288 (559)
T KOG1334|consen 209 GQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIA 288 (559)
T ss_pred CceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEe
Confidence 9999887633 222 23344577777777777754 56777777777777776654211000
Q ss_pred ---------------------------------------------EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc
Q 019326 169 ---------------------------------------------KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA 202 (343)
Q Consensus 169 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~ 202 (343)
..+-.|++++++.++.-++++ .|-.|+++.-..+
T Consensus 289 ~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~ 368 (559)
T KOG1334|consen 289 VDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMG 368 (559)
T ss_pred cCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccc
Confidence 011235778888666655555 8888888843321
Q ss_pred e------------eEEE-ec-C--CcceEEeeecC--CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEec
Q 019326 203 K------------LLCE-LD-G--KKRILCAAPGE--NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTK 264 (343)
Q Consensus 203 ~------------~~~~-~~-~--~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~ 264 (343)
. .++. ++ | ...|..+.|-. ..++++|+.-|.|.||+-.+++.++-+. +-...|+||.-+|.
T Consensus 369 ~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~Me-gDr~VVNCLEpHP~ 447 (559)
T KOG1334|consen 369 DGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFME-GDRHVVNCLEPHPH 447 (559)
T ss_pred cCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhh-cccceEeccCCCCC
Confidence 1 1111 22 2 23477777763 5799999999999999999999998888 66669999999999
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 265 NDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 265 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.+ .||+++-|.-|+||-..+.
T Consensus 448 ~P---------vLAsSGid~DVKIWTP~~~ 468 (559)
T KOG1334|consen 448 LP---------VLASSGIDHDVKIWTPLTA 468 (559)
T ss_pred Cc---------hhhccCCccceeeecCCcc
Confidence 88 9999999999999988544
No 212
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.73 E-value=3.3e-16 Score=119.47 Aligned_cols=180 Identities=19% Similarity=0.269 Sum_probs=135.3
Q ss_pred ccCCeEEEEEeecCCCCCCCCcceeeEEeE---EecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCee---eeE
Q 019326 7 SYEKFIWGYKLKPSNHYSSDQKTLTLTQLF---SYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSS---LGA 77 (343)
Q Consensus 7 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~---~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~---~~~ 77 (343)
+.+..+|+|.+...+. ....+... .-..+.+++++..|+ .+++.+.+-|-+..|||++++.. ...
T Consensus 118 Ts~D~LRlWri~~ee~------~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQ 191 (364)
T KOG0290|consen 118 TSSDFLRLWRIGDEES------RVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQ 191 (364)
T ss_pred cccCeEEEEeccCcCC------ceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeE
Confidence 3445899999975221 11111111 112356899999998 89999999999999999998733 556
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc-------------------------------------
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF------------------------------------- 120 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~------------------------------------- 120 (343)
+-.| ..+|..++|...+ .+.|++.+.||.|++||++..
T Consensus 192 LIAH-DKEV~DIaf~~~s----~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~ 266 (364)
T KOG0290|consen 192 LIAH-DKEVYDIAFLKGS----RDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSN 266 (364)
T ss_pred EEec-CcceeEEEeccCc----cceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCc
Confidence 7788 9999999999866 379999999999999998521
Q ss_pred -----------ceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCce------eEEEEcCCcceEEEEeC-
Q 019326 121 -----------VLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRR------SFYHKIGKEASLIKFDG- 181 (343)
Q Consensus 121 -----------~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~------~~~~~~~~~~~~~~~~~- 181 (343)
.++..+++|.+.|+.|+|.|.. ..|++++.|..+.+||+.+... +......++|+.+.|++
T Consensus 267 ~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~ 346 (364)
T KOG0290|consen 267 KVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSS 346 (364)
T ss_pred eEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeeccc
Confidence 2345667899999999999964 7999999999999999976432 23334567889999985
Q ss_pred CCCEEEEEeCCcEEEE
Q 019326 182 SGEKFFMVTEEKVGIH 197 (343)
Q Consensus 182 ~~~~~~~~~~~~i~~~ 197 (343)
....++++.++.+.+.
T Consensus 347 ~~Dwiai~~~kkleiL 362 (364)
T KOG0290|consen 347 QPDWIAICFGKKLEIL 362 (364)
T ss_pred CCCEEEEEecCeeeEE
Confidence 5667777766666553
No 213
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.73 E-value=1.4e-15 Score=120.84 Aligned_cols=246 Identities=13% Similarity=0.146 Sum_probs=178.0
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC------Ccceeeeee-eccccEEEEEEecCCCEEEEE
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD------PFVLLTSVK-VHKKGVNDLAVHHSGKLALTV 148 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~------~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~ 148 (343)
+.+.+| .+.|++|.|+.++ ++|++|+.|..+++|+++ +.+++.... .|...|.+++|....+.+++|
T Consensus 50 KD~~~H-~GCiNAlqFS~N~-----~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG 123 (609)
T KOG4227|consen 50 KDVREH-TGCINALQFSHND-----RFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSG 123 (609)
T ss_pred hhhhhh-ccccceeeeccCC-----eEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecC
Confidence 345678 8999999999998 899999999999999984 335555544 355899999999999999999
Q ss_pred eCCCeEEEEEccCCceeEEEEcCC---cceEEEEeCCCCEEEEE-eCCcEEEEEcccce-e---EEEecCCcceEEeeec
Q 019326 149 GRDDCLAMVNLVRGRRSFYHKIGK---EASLIKFDGSGEKFFMV-TEEKVGIHQAEDAK-L---LCELDGKKRILCAAPG 220 (343)
Q Consensus 149 ~~d~~i~~wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~-~---~~~~~~~~~i~~~~~~ 220 (343)
+.+++|...|+++.+.+....... .|..+..+|..+.+++. .++.+.+||.+... . +..-........+.|+
T Consensus 124 ~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~ 203 (609)
T KOG4227|consen 124 ERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFH 203 (609)
T ss_pred CCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeec
Confidence 999999999999999888777664 89999999999988888 89999999998754 2 2222245567777787
Q ss_pred C--CCeEEEEeCCCcEEEEECCCCc-----------------------------eeEEec--------ccccc-------
Q 019326 221 E--NGVLFTGGEDRSITAWDTNSGK-----------------------------VAYCIE--------DAHSA------- 254 (343)
Q Consensus 221 ~--~~~l~~~~~dg~i~i~d~~~~~-----------------------------~~~~~~--------~~h~~------- 254 (343)
+ ..+|++.+..+-+.+||.+... .+..+. .-|+.
T Consensus 204 P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~ 283 (609)
T KOG4227|consen 204 PETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKS 283 (609)
T ss_pred CCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEec
Confidence 5 4688999999999999987521 000000 01111
Q ss_pred -----------cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCC----------Cc---------ccc
Q 019326 255 -----------RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKP----------LP---------LAE 304 (343)
Q Consensus 255 -----------~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~----------~~---------~~~ 304 (343)
.+.+++|..+ +-+++|+.+-.|++|.+........ .| ..-
T Consensus 284 D~N~~GY~N~~T~KS~~F~~D----------~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VL 353 (609)
T KOG4227|consen 284 DHNPNGYCNIKTIKSMTFIDD----------YTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVL 353 (609)
T ss_pred cCCCCcceeeeeeeeeeeecc----------eeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEE
Confidence 2333333333 2599999999999999965311000 00 001
Q ss_pred cccccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 305 AKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 305 ~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
..+..-++.+.|++-..++++..-.+..+.+..
T Consensus 354 rGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 354 RGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred ecccccccceeecCCcceEeccchhhheecccc
Confidence 123455788999999888888777776666554
No 214
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.73 E-value=2.4e-16 Score=126.04 Aligned_cols=188 Identities=16% Similarity=0.126 Sum_probs=148.8
Q ss_pred EEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCccee
Q 019326 46 TTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL 123 (343)
Q Consensus 46 ~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 123 (343)
.+++|+ |..|++|+.||++|+|+..+...+.....| ...|.+|.|+|++ ++|++-+.| ..+||+.+++..+
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~-~~eV~DL~FS~dg-----k~lasig~d-~~~VW~~~~g~~~ 220 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAH-HAEVKDLDFSPDG-----KFLASIGAD-SARVWSVNTGAAL 220 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhh-cCccccceeCCCC-----cEEEEecCC-ceEEEEeccCchh
Confidence 567777 789999999999999998888888888888 8999999999999 899999999 9999999998766
Q ss_pred eeeeec--cccEEEEEEecCC-----CEEEEEeCCCeEEEEEccCCcee------EEEEcCCcceEEEEeCCCCEEEEE-
Q 019326 124 TSVKVH--KKGVNDLAVHHSG-----KLALTVGRDDCLAMVNLVRGRRS------FYHKIGKEASLIKFDGSGEKFFMV- 189 (343)
Q Consensus 124 ~~~~~~--~~~v~~i~~~~~~-----~~l~~~~~d~~i~~wd~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~- 189 (343)
...... ......+.|+.++ ..++....-+.|..||+.....- ........+++++.+++|++++.+
T Consensus 221 a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT 300 (398)
T KOG0771|consen 221 ARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGT 300 (398)
T ss_pred hhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEec
Confidence 665422 2255667787766 33333344567777776543321 111223579999999999999999
Q ss_pred eCCcEEEEEcccceeEEEec--CCcceEEeeecC-CCeEEEEeCCCcEEEEECC
Q 019326 190 TEEKVGIHQAEDAKLLCELD--GKKRILCAAPGE-NGVLFTGGEDRSITAWDTN 240 (343)
Q Consensus 190 ~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~ 240 (343)
.+|.|.+++..+.+.++..+ |..-|+.+.|+| .+++++-+.+..+.+..+.
T Consensus 301 ~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 301 MDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA 354 (398)
T ss_pred cCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence 99999999999998888877 888999999996 4688888888888887664
No 215
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.72 E-value=1e-16 Score=132.33 Aligned_cols=166 Identities=16% Similarity=0.167 Sum_probs=130.6
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
+.....+.||++.|+|++|+ |.+|++|+.|-.+.|||.-..+++..+...|..-|.++.|.|..+ .+.+++|..|
T Consensus 40 L~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tn---nriv~sgAgD 116 (758)
T KOG1310|consen 40 LDLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTN---NRIVLSGAGD 116 (758)
T ss_pred cchhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCC---CeEEEeccCc
Confidence 34456778999999999999 999999999999999999988888888655499999999999763 3788999999
Q ss_pred CeEEEEECCC----------cceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEEE---------
Q 019326 110 GFVSIFDADP----------FVLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHK--------- 169 (343)
Q Consensus 110 g~i~iwd~~~----------~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~--------- 169 (343)
..|+++|+.. .+....+..|...|..|+-.|++ +.+.+++.||+|+.+|++....-....
T Consensus 117 k~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny 196 (758)
T KOG1310|consen 117 KLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNY 196 (758)
T ss_pred ceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHh
Confidence 9999999963 23445566789999999999998 899999999999999998743111100
Q ss_pred --cCCcceEEEEeCCCC-EEEEE-eCCcEEEEEcc
Q 019326 170 --IGKEASLIKFDGSGE-KFFMV-TEEKVGIHQAE 200 (343)
Q Consensus 170 --~~~~~~~~~~~~~~~-~~~~~-~~~~i~~~d~~ 200 (343)
.--...++.++|... +|+++ .+-..++||.+
T Consensus 197 ~~~lielk~ltisp~rp~~laVGgsdpfarLYD~R 231 (758)
T KOG1310|consen 197 NPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRR 231 (758)
T ss_pred chhhheeeeeeecCCCCceEEecCCCchhhhhhhh
Confidence 012345677777655 44555 67777888853
No 216
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.71 E-value=1.1e-15 Score=125.88 Aligned_cols=166 Identities=16% Similarity=0.144 Sum_probs=127.3
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEec---cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC---------
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIH---HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP--------- 119 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--------- 119 (343)
+--|+.|-.-|.|.+.|....+..+.+. ......|+|+.|.|.+. ..++++-.+|.+++||..-
T Consensus 185 g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~----~~Fl~a~~sGnlyly~~~~~~~~t~p~~ 260 (636)
T KOG2394|consen 185 GLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSD----SLFLVAHASGNLYLYDKEIVCGATAPSY 260 (636)
T ss_pred CcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCC----ceEEEEEecCceEEeeccccccCCCCcc
Confidence 4567788888999999877532222121 11258899999999883 7888889999999997521
Q ss_pred -----c--------------ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEE
Q 019326 120 -----F--------------VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKF 179 (343)
Q Consensus 120 -----~--------------~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~ 179 (343)
+ .++..+.-..+.|..++|+|||++|++.+.||.++|+|..+.+.+...+ .-+...|++|
T Consensus 261 ~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcW 340 (636)
T KOG2394|consen 261 QALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCW 340 (636)
T ss_pred cccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEE
Confidence 0 1222233334688999999999999999999999999998876543322 2366889999
Q ss_pred eCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC
Q 019326 180 DGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE 221 (343)
Q Consensus 180 ~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~ 221 (343)
+|||++++++ .|..|.||.+...+.+..-. |...|..++|++
T Consensus 341 SPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 341 SPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred cCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 9999999999 99999999999999887765 889999999964
No 217
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.68 E-value=9.2e-16 Score=126.36 Aligned_cols=164 Identities=22% Similarity=0.241 Sum_probs=127.5
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecC--CCCCeEEEEec---CceEEEeeCCCeEEEEEcCCC----
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPA--HLSPITTVAVS---GTAAASGGTDDTIHLYDLSTS---- 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~---- 72 (343)
.|++|-.-|.|.+.|.... +...++.... .+..|+|+.|- ...++++-.+|.+.+||....
T Consensus 187 dllIGf~tGqvq~idp~~~----------~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t 256 (636)
T KOG2394|consen 187 DLLIGFTTGQVQLIDPINF----------EVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGAT 256 (636)
T ss_pred ceEEeeccCceEEecchhh----------HHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCC
Confidence 4677777788888776541 1122111111 24789999997 567888888999999976410
Q ss_pred ------------------------eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeee
Q 019326 73 ------------------------SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKV 128 (343)
Q Consensus 73 ------------------------~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 128 (343)
.++..+.-. ...|+.++|+|++ ++|++.+.||.++|+|..+.+++..++.
T Consensus 257 ~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~-~g~in~f~FS~DG-----~~LA~VSqDGfLRvF~fdt~eLlg~mkS 330 (636)
T KOG2394|consen 257 APSYQALKDGDQFAILTSKSKKTRNPVARWHIG-EGSINEFAFSPDG-----KYLATVSQDGFLRIFDFDTQELLGVMKS 330 (636)
T ss_pred CCcccccCCCCeeEEeeeeccccCCccceeEec-cccccceeEcCCC-----ceEEEEecCceEEEeeccHHHHHHHHHh
Confidence 112222223 4689999999998 8999999999999999999998888887
Q ss_pred ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEE-EEcCCcceEEEEeC
Q 019326 129 HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFY-HKIGKEASLIKFDG 181 (343)
Q Consensus 129 ~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~ 181 (343)
.-+...|++|+|||++|++|++|.-|.+|.+...+.+.. ..+...|+.++|+|
T Consensus 331 YFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 331 YFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred hccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 788999999999999999999999999999998886654 55678899999997
No 218
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.68 E-value=2.6e-14 Score=118.92 Aligned_cols=260 Identities=14% Similarity=0.133 Sum_probs=188.2
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|.+--.|++||+.. +.++-...+ -...|.-.-.+ -..++--..|.+|.+-... |.... +.
T Consensus 66 ~lAtG~YKP~ikvydlan----------LSLKFERhl--Dae~V~feiLsDD~SK~v~L~~DR~IefHak~-G~hy~-~R 131 (703)
T KOG2321|consen 66 LLATGTYKPQIKVYDLAN----------LSLKFERHL--DAEVVDFEILSDDYSKSVFLQNDRTIEFHAKY-GRHYR-TR 131 (703)
T ss_pred EEEecccCCceEEEEccc----------ceeeeeecc--cccceeEEEeccchhhheEeecCceeeehhhc-Ceeee-ee
Confidence 378899999999999986 122222211 12334333333 1223334456666554322 22111 11
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
- ...-..++++... .-|+.++....|+-++++.|+.+..+....+.++++..++-..+|++|+.+|.|..||.
T Consensus 132 I--P~~GRDm~y~~~s-----cDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDp 204 (703)
T KOG2321|consen 132 I--PKFGRDMKYHKPS-----CDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDP 204 (703)
T ss_pred c--CcCCccccccCCC-----ccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecc
Confidence 1 1233455565444 35666666678999999999999999988899999999999899999999999999999
Q ss_pred cCCceeEEEEcCC------------cceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecC--CcceEEeeecC---
Q 019326 160 VRGRRSFYHKIGK------------EASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG--KKRILCAAPGE--- 221 (343)
Q Consensus 160 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~--~~~i~~~~~~~--- 221 (343)
+....+....... .|+++.|+.+|-.++++ ..|.+.+||+++.+++..-.| ..+|..+.|.+
T Consensus 205 R~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~ 284 (703)
T KOG2321|consen 205 RDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQ 284 (703)
T ss_pred hhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCC
Confidence 9887665554432 38899999999999999 999999999999998877665 45678888863
Q ss_pred CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 222 NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 222 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
++.+++ .....++|||-.+|++...+. ....++.+++.|+.. +++++-.++.+..|=+...
T Consensus 285 q~~v~S-~Dk~~~kiWd~~~Gk~~asiE--pt~~lND~C~~p~sG---------m~f~Ane~~~m~~yyiP~L 345 (703)
T KOG2321|consen 285 QNKVVS-MDKRILKIWDECTGKPMASIE--PTSDLNDFCFVPGSG---------MFFTANESSKMHTYYIPSL 345 (703)
T ss_pred CceEEe-cchHHhhhcccccCCceeecc--ccCCcCceeeecCCc---------eEEEecCCCcceeEEcccc
Confidence 244544 456789999999999999998 555699999999988 9999999998888776653
No 219
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.67 E-value=2.7e-13 Score=116.05 Aligned_cols=258 Identities=13% Similarity=0.117 Sum_probs=168.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHH 81 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 81 (343)
++++++.+|.|..+|..+ ++. +.............+..++.++.++.+|.+..+|..+|+.+......
T Consensus 67 ~v~v~~~~g~v~a~d~~t-------G~~-----~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~ 134 (377)
T TIGR03300 67 KVYAADADGTVVALDAET-------GKR-----LWRVDLDERLSGGVGADGGLVFVGTEKGEVIALDAEDGKELWRAKLS 134 (377)
T ss_pred EEEEECCCCeEEEEEccC-------CcE-----eeeecCCCCcccceEEcCCEEEEEcCCCEEEEEECCCCcEeeeeccC
Confidence 467888899999999876 222 22211111112234455788889999999999999999998877654
Q ss_pred CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEE-----EEEEecCCCEEEEEeCCCeEEE
Q 019326 82 ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVN-----DLAVHHSGKLALTVGRDDCLAM 156 (343)
Q Consensus 82 ~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-----~i~~~~~~~~l~~~~~d~~i~~ 156 (343)
..+.+.....+ ..++.++.+|.++.||.++++.+.++........ +.... +..++.+..++.+..
T Consensus 135 --~~~~~~p~v~~------~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~--~~~v~~~~~~g~v~a 204 (377)
T TIGR03300 135 --SEVLSPPLVAN------GLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA--DGGVLVGFAGGKLVA 204 (377)
T ss_pred --ceeecCCEEEC------CEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE--CCEEEEECCCCEEEE
Confidence 33322211122 3677788899999999999998877764332111 11112 246778888999999
Q ss_pred EEccCCceeEEEEcCCcc------------eEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecCCC
Q 019326 157 VNLVRGRRSFYHKIGKEA------------SLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENG 223 (343)
Q Consensus 157 wd~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~ 223 (343)
+|.++++........... ....+ .+..++++ .++.+..+|..+++.+....... ...... .++
T Consensus 205 ld~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~-~~~p~~-~~~ 280 (377)
T TIGR03300 205 LDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVV--DGGQVYAVSYQGRVAALDLRSGRVLWKRDASS-YQGPAV-DDN 280 (377)
T ss_pred EEccCCCEeeeeccccCCCCCchhhhhccCCccEE--ECCEEEEEEcCCEEEEEECCCCcEEEeeccCC-ccCceE-eCC
Confidence 999999876654332110 01111 23455555 89999999999998887765322 122222 466
Q ss_pred eEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc
Q 019326 224 VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK 296 (343)
Q Consensus 224 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 296 (343)
.++.++.+|.++.+|..+++.+............+.... +. .+++++.||.|+++|..+++.
T Consensus 281 ~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~--g~---------~l~~~~~~G~l~~~d~~tG~~ 342 (377)
T TIGR03300 281 RLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAVV--GG---------YLVVGDFEGYLHWLSREDGSF 342 (377)
T ss_pred EEEEECCCCeEEEEECCCCcEEEccccccCCccccCEEE--CC---------EEEEEeCCCEEEEEECCCCCE
Confidence 788888999999999999998876641111222222222 22 889999999999999988753
No 220
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=7.3e-14 Score=120.71 Aligned_cols=214 Identities=12% Similarity=0.054 Sum_probs=144.1
Q ss_pred CCCCCeEEEEec--CceEEEee---CCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEE-eeCCC--e
Q 019326 40 AHLSPITTVAVS--GTAAASGG---TDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFS-TSADG--F 111 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s-~~~dg--~ 111 (343)
.+...+.+.+|+ |+.|+..+ .+..|.+|++.+++..... .. ...+....|+|++ +.|+. .+.+| .
T Consensus 196 ~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~-~~-~~~~~~~~~SPDG-----~~La~~~~~~g~~~ 268 (429)
T PRK03629 196 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA-SF-PRHNGAPAFSPDG-----SKLAFALSKTGSLN 268 (429)
T ss_pred cCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEcc-CC-CCCcCCeEECCCC-----CEEEEEEcCCCCcE
Confidence 466789999999 77777643 2457999999887543322 22 2345578999999 56654 45455 5
Q ss_pred EEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC-C--eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEE
Q 019326 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD-D--CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFM 188 (343)
Q Consensus 112 i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d-~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (343)
|++||+++++.... ..+...+....|+|+|+.|+..+.+ + .|..+|+.+++...............|+|+|+.++.
T Consensus 269 I~~~d~~tg~~~~l-t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~ 347 (429)
T PRK03629 269 LYVMDLASGQIRQV-TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVM 347 (429)
T ss_pred EEEEECCCCCEEEc-cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEE
Confidence 89999988765443 3344567889999999988777654 3 455557766654433333344567899999999887
Q ss_pred E-e-C--CcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCc---EEEEECCCCceeEEecccccccEEEEE
Q 019326 189 V-T-E--EKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRS---ITAWDTNSGKVAYCIEDAHSARVKGIV 260 (343)
Q Consensus 189 ~-~-~--~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~---i~i~d~~~~~~~~~~~~~h~~~v~~~~ 260 (343)
. . + ..+.+||+.+++.. .+..........|+ ++..++.++.++. +.++++. +.....+. +|...+...+
T Consensus 348 ~~~~~g~~~I~~~dl~~g~~~-~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~-G~~~~~l~-~~~~~~~~p~ 424 (429)
T PRK03629 348 VSSNGGQQHIAKQDLATGGVQ-VLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLP-ATDGQVKFPA 424 (429)
T ss_pred EEccCCCceEEEEECCCCCeE-EeCCCCCCCCceECCCCCEEEEEEcCCCceEEEEEECC-CCCeEECc-cCCCCcCCcc
Confidence 6 2 2 35888998877643 33322223355676 5667777776654 6777774 66677777 7888888888
Q ss_pred EEec
Q 019326 261 VLTK 264 (343)
Q Consensus 261 ~~~~ 264 (343)
|+|.
T Consensus 425 Wsp~ 428 (429)
T PRK03629 425 WSPY 428 (429)
T ss_pred cCCC
Confidence 8763
No 221
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.67 E-value=3.3e-14 Score=111.89 Aligned_cols=236 Identities=15% Similarity=0.154 Sum_probs=164.6
Q ss_pred CCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc
Q 019326 43 SPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120 (343)
Q Consensus 43 ~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 120 (343)
..+..++|+ -..+|++..|-.|++|+-.. ++...++......|+|++|.|.+ ...|+.|+..| |.+|.....
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPls----aselavgCr~g-IciW~~s~t 172 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLS----ASELAVGCRAG-ICIWSDSRT 172 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCC----cceeeeeecce-eEEEEcCcc
Confidence 346677888 45688899999999999776 66666665547889999999998 36777777764 889976321
Q ss_pred ----c--------e--eeeeeeccccEEEEEEecCCCEEEEEeC-CCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCC
Q 019326 121 ----V--------L--LTSVKVHKKGVNDLAVHHSGKLALTVGR-DDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGE 184 (343)
Q Consensus 121 ----~--------~--~~~~~~~~~~v~~i~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~ 184 (343)
+ . +....+| .+|+++.|.+||..+++++. |..|.+||..++..+.... ..+.++.+.|+|++.
T Consensus 173 ln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd 251 (445)
T KOG2139|consen 173 LNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGD 251 (445)
T ss_pred cccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCC
Confidence 1 1 1112233 58999999999999999886 6789999999999877663 447788999999999
Q ss_pred EEEEE-eCCcEEEEEcc-cceeEEEecCCcceEEeeecC-CC-eEEEEeCCCcEEEEECCCCc-------------eeEE
Q 019326 185 KFFMV-TEEKVGIHQAE-DAKLLCELDGKKRILCAAPGE-NG-VLFTGGEDRSITAWDTNSGK-------------VAYC 247 (343)
Q Consensus 185 ~~~~~-~~~~i~~~d~~-~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~-------------~~~~ 247 (343)
+++++ .|+..++|+.. +-...+..-..+.|...+|++ +. +|++.+..-.++-....... ++..
T Consensus 252 ~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaD 331 (445)
T KOG2139|consen 252 VLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIAD 331 (445)
T ss_pred EEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeecc
Confidence 99999 99999999544 333444444667899999985 44 45555544443332221110 1111
Q ss_pred ec--------ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCC--------cEEEEeccCc
Q 019326 248 IE--------DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG--------VICVWDVRMA 294 (343)
Q Consensus 248 ~~--------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg--------~i~vwd~~~~ 294 (343)
+. ..-.+++.+++|.|.+. +|++.-..+ .|.+||.+..
T Consensus 332 L~e~ti~ag~~l~cgeaq~lawDpsGe---------yLav~fKg~~~v~~~k~~i~~fdtr~s 385 (445)
T KOG2139|consen 332 LQEVTICAGQRLCCGEAQCLAWDPSGE---------YLAVIFKGQSFVLLCKLHISRFDTRKS 385 (445)
T ss_pred chhhhhhcCcccccCccceeeECCCCC---------EEEEEEcCCchhhhhhhhhhhhccccc
Confidence 11 01146788999999988 888765433 4677887754
No 222
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.65 E-value=2.7e-14 Score=111.12 Aligned_cols=186 Identities=12% Similarity=0.073 Sum_probs=136.7
Q ss_pred Eec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee
Q 019326 49 AVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV 126 (343)
Q Consensus 49 ~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 126 (343)
+|+ |+++|+++.- .+.|-|..+-+..+.+..- ..|.-+.|..+.- ..|.....++.|.+|++...+-...+
T Consensus 15 ~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~cl--dki~yieW~ads~----~ilC~~yk~~~vqvwsl~Qpew~ckI 87 (447)
T KOG4497|consen 15 SFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLCL--DKIVYIEWKADSC----HILCVAYKDPKVQVWSLVQPEWYCKI 87 (447)
T ss_pred eECCCCCeeeeeeee-EEEEeccchhhHHHHHHHH--HHhhheeeeccce----eeeeeeeccceEEEEEeecceeEEEe
Confidence 455 9999999876 7888899888777766655 6788899998872 24445667889999999988888888
Q ss_pred eeccccEEEEEEecCCCEE-EEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEe--CCc----------
Q 019326 127 KVHKKGVNDLAVHHSGKLA-LTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT--EEK---------- 193 (343)
Q Consensus 127 ~~~~~~v~~i~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------- 193 (343)
.....++.+++|+|+|+.+ .+...+-.|.+|.+.+.+.....-.+..+..++|+|+|++.+.+. |..
T Consensus 88 deg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~ 167 (447)
T KOG4497|consen 88 DEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKA 167 (447)
T ss_pred ccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHH
Confidence 8788899999999999655 455668999999999988766666667778899999999888772 211
Q ss_pred -------------------------EEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEeCCCcEEEEECCC
Q 019326 194 -------------------------VGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNS 241 (343)
Q Consensus 194 -------------------------i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~ 241 (343)
+.+||..-.-.+..+...-.+..+.|++ +++++.|+.|+.+++.+--+
T Consensus 168 W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~t 241 (447)
T KOG4497|consen 168 WILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFT 241 (447)
T ss_pred HHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhceee
Confidence 2222211111111112234577788887 78999999999999876544
No 223
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=7.6e-14 Score=121.11 Aligned_cols=230 Identities=15% Similarity=0.084 Sum_probs=151.0
Q ss_pred CeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeC---CCeEEEEEcCCCeeeeEeccCCCC
Q 019326 10 KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGT---DDTIHLYDLSTSSSLGAIHHHESS 84 (343)
Q Consensus 10 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~ 84 (343)
..|.+||... .....+..|...+.+.+|+ ++.|+..+. ...|.+||+.+++... +... ..
T Consensus 184 ~~l~i~D~~g-------------~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~-~g 248 (433)
T PRK04922 184 YALQVADSDG-------------YNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASF-RG 248 (433)
T ss_pred EEEEEECCCC-------------CCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccC-CC
Confidence 3577888754 1122334567789999998 778887764 3469999998876543 3333 34
Q ss_pred CeEEEEEeCCCCCCCCceE-EEeeCCC--eEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC-CCe--EEEEE
Q 019326 85 SVTSLAFYTPQNLSVPRNL-FSTSADG--FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-DDC--LAMVN 158 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l-~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-d~~--i~~wd 158 (343)
...+..|+|++ +.| ++.+.+| .|++||+.+++. ..+..+.......+|+|+++.|+..+. +|. |+++|
T Consensus 249 ~~~~~~~SpDG-----~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~d 322 (433)
T PRK04922 249 INGAPSFSPDG-----RRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVA 322 (433)
T ss_pred CccCceECCCC-----CEEEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 55678999999 555 4556655 599999988764 344445555667899999998887764 444 77777
Q ss_pred ccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eC---CcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeC---
Q 019326 159 LVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TE---EKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGE--- 230 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~--- 230 (343)
+.+++..............+|+|+|+.++.. .+ ..|.+||+.+++.. .+.+........|+ +++.++..+.
T Consensus 323 l~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~~~~~p~~spdG~~i~~~s~~~g 401 (433)
T PRK04922 323 ASGGSAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPGSLDESPSFAPNGSMVLYATREGG 401 (433)
T ss_pred CCCCCeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCCCCCCCceECCCCCEEEEEEecCC
Confidence 7776644333333445568999999999876 32 25889999877654 44433334455777 4565555444
Q ss_pred CCcEEEEECCCCceeEEecccccccEEEEEEEe
Q 019326 231 DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLT 263 (343)
Q Consensus 231 dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~ 263 (343)
.+.|.+++.. +.....+. .+.+.+...+|+|
T Consensus 402 ~~~L~~~~~~-g~~~~~l~-~~~g~~~~p~wsp 432 (433)
T PRK04922 402 RGVLAAVSTD-GRVRQRLV-SADGEVREPAWSP 432 (433)
T ss_pred ceEEEEEECC-CCceEEcc-cCCCCCCCCccCC
Confidence 2458888885 44555665 4556666666654
No 224
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=3.8e-13 Score=116.28 Aligned_cols=231 Identities=12% Similarity=0.058 Sum_probs=146.0
Q ss_pred eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC---CCeEEEEECCCcceeeeeeeccccEEEEEEe
Q 019326 63 TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA---DGFVSIFDADPFVLLTSVKVHKKGVNDLAVH 139 (343)
Q Consensus 63 ~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~ 139 (343)
.|.+||.+..... .+..+ ...+...+|+|++ +.|+..+. +..|.+|++.+++... +....+.+...+|+
T Consensus 180 ~l~~~d~dg~~~~-~lt~~-~~~~~~p~wSPDG-----~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~S 251 (429)
T PRK03629 180 ELRVSDYDGYNQF-VVHRS-PQPLMSPAWSPDG-----SKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFS 251 (429)
T ss_pred eEEEEcCCCCCCE-EeecC-CCceeeeEEcCCC-----CEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEEC
Confidence 6889998755443 34445 5789999999999 67765442 4579999998875432 22233345568999
Q ss_pred cCCCEEEEE-eCCC--eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEe--CC--cEEEEEcccceeEEEecCCc
Q 019326 140 HSGKLALTV-GRDD--CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT--EE--KVGIHQAEDAKLLCELDGKK 212 (343)
Q Consensus 140 ~~~~~l~~~-~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~i~~~d~~~~~~~~~~~~~~ 212 (343)
|||+.|+.. +.+| .|++||+.+++..........+....|+|+++.++... ++ .|.++++.+++..+......
T Consensus 252 PDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~ 331 (429)
T PRK03629 252 PDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGS 331 (429)
T ss_pred CCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCC
Confidence 999988765 3344 58999998887655544445677899999999887772 33 35555666655433222333
Q ss_pred ceEEeeecC-CCeEEEEeC-C--CcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCc---
Q 019326 213 RILCAAPGE-NGVLFTGGE-D--RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGV--- 285 (343)
Q Consensus 213 ~i~~~~~~~-~~~l~~~~~-d--g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~--- 285 (343)
......|++ ++.++..+. + ..|.+||+.+++. ..+...+ ......|+|++. +|+.++.++.
T Consensus 332 ~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~-~~Lt~~~--~~~~p~~SpDG~---------~i~~~s~~~~~~~ 399 (429)
T PRK03629 332 QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLTDTF--LDETPSIAPNGT---------MVIYSSSQGMGSV 399 (429)
T ss_pred CccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe-EEeCCCC--CCCCceECCCCC---------EEEEEEcCCCceE
Confidence 445677774 566665443 3 3588899987763 3443121 223456777666 8988888764
Q ss_pred EEEEeccCccccCCCcccccccccceeEEEcCC
Q 019326 286 ICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSS 318 (343)
Q Consensus 286 i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 318 (343)
+.++++.... .. .+. .+.+.+...+|+|
T Consensus 400 l~~~~~~G~~-~~--~l~--~~~~~~~~p~Wsp 427 (429)
T PRK03629 400 LNLVSTDGRF-KA--RLP--ATDGQVKFPAWSP 427 (429)
T ss_pred EEEEECCCCC-eE--ECc--cCCCCcCCcccCC
Confidence 6677775432 11 111 1234466677765
No 225
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=3.7e-13 Score=116.99 Aligned_cols=213 Identities=10% Similarity=0.047 Sum_probs=143.6
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC---CCeEEEEECCCcceeeeeeeccccEEEEEE
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA---DGFVSIFDADPFVLLTSVKVHKKGVNDLAV 138 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~ 138 (343)
..|.++|.+. .....+..+ ...+.+.+|+|++ +.|+..+. +..|++||+.+++. ..+..+.+.+...+|
T Consensus 182 ~~l~~~d~dg-~~~~~lt~~-~~~v~~p~wSpDG-----~~lay~s~~~g~~~i~~~dl~~g~~-~~l~~~~g~~~~~~~ 253 (435)
T PRK05137 182 KRLAIMDQDG-ANVRYLTDG-SSLVLTPRFSPNR-----QEITYMSYANGRPRVYLLDLETGQR-ELVGNFPGMTFAPRF 253 (435)
T ss_pred eEEEEECCCC-CCcEEEecC-CCCeEeeEECCCC-----CEEEEEEecCCCCEEEEEECCCCcE-EEeecCCCcccCcEE
Confidence 3788899864 444556566 6889999999999 67776653 46899999988764 344456667788999
Q ss_pred ecCCCEEE-EEeCCCe--EEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEe--C--CcEEEEEcccceeEEEecCC
Q 019326 139 HHSGKLAL-TVGRDDC--LAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT--E--EKVGIHQAEDAKLLCELDGK 211 (343)
Q Consensus 139 ~~~~~~l~-~~~~d~~--i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~i~~~d~~~~~~~~~~~~~ 211 (343)
+|+|+.|+ +.+.++. |++||+.+++...............|+|+++.++... + ..|.++|+..++......+.
T Consensus 254 SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~ 333 (435)
T PRK05137 254 SPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGG 333 (435)
T ss_pred CCCCCEEEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCC
Confidence 99998775 4455554 7788988877654444444556789999999888773 2 35888888766554433344
Q ss_pred cceEEeeec-CCCeEEEEeCC---CcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC----
Q 019326 212 KRILCAAPG-ENGVLFTGGED---RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD---- 283 (343)
Q Consensus 212 ~~i~~~~~~-~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d---- 283 (343)
..+....|+ +++.++....+ ..|.+||+..+. ...+. ....+....|+|++. +|+..+.+
T Consensus 334 ~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt--~~~~~~~p~~spDG~---------~i~~~~~~~~~~ 401 (435)
T PRK05137 334 GRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILT--SGFLVEGPTWAPNGR---------VIMFFRQTPGSG 401 (435)
T ss_pred CcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEecc--CCCCCCCCeECCCCC---------EEEEEEccCCCC
Confidence 556667787 45666655433 368888986544 34444 223466778888776 66654432
Q ss_pred --CcEEEEeccCc
Q 019326 284 --GVICVWDVRMA 294 (343)
Q Consensus 284 --g~i~vwd~~~~ 294 (343)
..|.++|+...
T Consensus 402 ~~~~L~~~dl~g~ 414 (435)
T PRK05137 402 GAPKLYTVDLTGR 414 (435)
T ss_pred CcceEEEEECCCC
Confidence 25777777654
No 226
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.65 E-value=2.1e-11 Score=102.64 Aligned_cols=265 Identities=17% Similarity=0.221 Sum_probs=173.6
Q ss_pred eEEeccC----CeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeC----CCeEEEEEcCCC
Q 019326 3 LIAGSYE----KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGT----DDTIHLYDLSTS 72 (343)
Q Consensus 3 l~~g~~d----~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~----dg~i~iwd~~~~ 72 (343)
+++|++. +.|++|++... ..++..+.... -......|+++ +++|++... +|.|..|.+...
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~--------~g~l~~~~~~~-~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~ 72 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEE--------TGTLTLVQTVA-EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPD 72 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETT--------TTEEEEEEEEE-ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETT
T ss_pred EEEEcCCCCCCCcEEEEEEcCC--------CCCceEeeeec-CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCC
Confidence 6778877 79999999541 22344344332 23445567776 788888766 578999988764
Q ss_pred ----eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-CCeEEEEECCC-cceeee---ee--e--------ccccE
Q 019326 73 ----SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-DGFVSIFDADP-FVLLTS---VK--V--------HKKGV 133 (343)
Q Consensus 73 ----~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~-~~~~~~---~~--~--------~~~~v 133 (343)
+.+...... ......++++|++ ++|+++.. +|.|.++++.. +..... +. + .....
T Consensus 73 ~g~L~~~~~~~~~-g~~p~~i~~~~~g-----~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~ 146 (345)
T PF10282_consen 73 TGTLTLLNSVPSG-GSSPCHIAVDPDG-----RFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHP 146 (345)
T ss_dssp TTEEEEEEEEEES-SSCEEEEEECTTS-----SEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCE
T ss_pred cceeEEeeeeccC-CCCcEEEEEecCC-----CEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccc
Confidence 233344433 4566789999999 77777765 89999999976 333222 11 0 12356
Q ss_pred EEEEEecCCCEEEEEeC-CCeEEEEEccCCc--eeE----EEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcc--cc
Q 019326 134 NDLAVHHSGKLALTVGR-DDCLAMVNLVRGR--RSF----YHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAE--DA 202 (343)
Q Consensus 134 ~~i~~~~~~~~l~~~~~-d~~i~~wd~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~--~~ 202 (343)
.++.++|+++++++... ...|.+|++.... ... .......+..+.|+|+++++++. .++.|.++++. ++
T Consensus 147 H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g 226 (345)
T PF10282_consen 147 HQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDG 226 (345)
T ss_dssp EEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred eeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCC
Confidence 78999999998877654 4679999997765 222 22334667889999999998888 68889999988 33
Q ss_pred e--eEEEec-------CCcceEEeeec-CCCeEEEEe-CCCcEEEEECC--CCc--eeEEecccccccEEEEEEEecCCC
Q 019326 203 K--LLCELD-------GKKRILCAAPG-ENGVLFTGG-EDRSITAWDTN--SGK--VAYCIEDAHSARVKGIVVLTKNDG 267 (343)
Q Consensus 203 ~--~~~~~~-------~~~~i~~~~~~-~~~~l~~~~-~dg~i~i~d~~--~~~--~~~~~~~~h~~~v~~~~~~~~~~~ 267 (343)
. .+..+. .......+.++ ++++|+++. ..+.|.+|++. +++ .+..+. ......+.++++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~-~~G~~Pr~~~~s~~g~- 304 (345)
T PF10282_consen 227 SLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVP-TGGKFPRHFAFSPDGR- 304 (345)
T ss_dssp EEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEE-ESSSSEEEEEE-TTSS-
T ss_pred ceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEe-CCCCCccEEEEeCCCC-
Confidence 2 223332 12246777887 466666554 57789999993 233 334444 3345589999999887
Q ss_pred CCCCCCCeEEEEEc-CCCcEEEEecc
Q 019326 268 GSTAENPYLVASAS-SDGVICVWDVR 292 (343)
Q Consensus 268 ~~~~~~~~~l~s~~-~dg~i~vwd~~ 292 (343)
+|+++. .++.|.+|+++
T Consensus 305 --------~l~Va~~~s~~v~vf~~d 322 (345)
T PF10282_consen 305 --------YLYVANQDSNTVSVFDID 322 (345)
T ss_dssp --------EEEEEETTTTEEEEEEEE
T ss_pred --------EEEEEecCCCeEEEEEEe
Confidence 777665 66799999885
No 227
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.63 E-value=2.3e-13 Score=106.05 Aligned_cols=267 Identities=12% Similarity=0.102 Sum_probs=182.4
Q ss_pred CCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC
Q 019326 42 LSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD 118 (343)
Q Consensus 42 ~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 118 (343)
-+.|.-+.|. --.|.....++.|.+|++...+-...++.. ...+.+++|+|++. ..|.+...+-.|.+|.+.
T Consensus 48 ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg-~agls~~~WSPdgr----hiL~tseF~lriTVWSL~ 122 (447)
T KOG4497|consen 48 LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEG-QAGLSSISWSPDGR----HILLTSEFDLRITVWSLN 122 (447)
T ss_pred HHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccC-CCcceeeeECCCcc----eEeeeecceeEEEEEEec
Confidence 3567777777 234566678899999999999999999988 89999999999993 456677779999999998
Q ss_pred CcceeeeeeeccccEEEEEEecCCCEEEEEeC------------------------------------CCeEEEEEccCC
Q 019326 119 PFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR------------------------------------DDCLAMVNLVRG 162 (343)
Q Consensus 119 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~------------------------------------d~~i~~wd~~~~ 162 (343)
+.+.. -++-.+..+..++|+|+|++.+.+++ +..+.+||.--.
T Consensus 123 t~~~~-~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Le 201 (447)
T KOG4497|consen 123 TQKGY-LLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLE 201 (447)
T ss_pred cceeE-EecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhh
Confidence 74432 23323446688888888887766653 223445553322
Q ss_pred ceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEE-----------------------------------
Q 019326 163 RRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLC----------------------------------- 206 (343)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~----------------------------------- 206 (343)
-.+....-+-.+..++|+|.+++++++ .|+.+++.+--+-+...
T Consensus 202 ykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p 281 (447)
T KOG4497|consen 202 YKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTP 281 (447)
T ss_pred heeeeeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCC
Confidence 333333444567789999999999999 89888775422111000
Q ss_pred -------------------------Eec-------CCcceEEeeecCCC-eEEEEeC--CCcEEEEECCCCceeEEeccc
Q 019326 207 -------------------------ELD-------GKKRILCAAPGENG-VLFTGGE--DRSITAWDTNSGKVAYCIEDA 251 (343)
Q Consensus 207 -------------------------~~~-------~~~~i~~~~~~~~~-~l~~~~~--dg~i~i~d~~~~~~~~~~~~~ 251 (343)
.++ ....+.-++|+.+. ++++-.+ -+.+-+||+++.+....+.
T Consensus 282 ~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-- 359 (447)
T KOG4497|consen 282 TDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-- 359 (447)
T ss_pred CccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh--
Confidence 000 01224457777554 4444332 2568999999887666665
Q ss_pred ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 252 HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 252 h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
...+|....|.|... .|+.+....++++|...... .+.....+-.|..+.|.-+|.+++.-..|-
T Consensus 360 Qk~piraf~WdP~~p---------rL~vctg~srLY~W~psg~~-----~V~vP~~GF~i~~l~W~~~g~~i~l~~kDa 424 (447)
T KOG4497|consen 360 QKHPIRAFEWDPGRP---------RLVVCTGKSRLYFWAPSGPR-----VVGVPKKGFNIQKLQWLQPGEFIVLCGKDA 424 (447)
T ss_pred hccceeEEEeCCCCc---------eEEEEcCCceEEEEcCCCce-----EEecCCCCceeeeEEecCCCcEEEEEcCCc
Confidence 678999999999987 67777667789999887532 222222334688899999998887766665
No 228
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=2.5e-13 Score=117.90 Aligned_cols=212 Identities=11% Similarity=0.043 Sum_probs=139.5
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC---CeEEEEECCCcceeeeeeeccccEEEEEE
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD---GFVSIFDADPFVLLTSVKVHKKGVNDLAV 138 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~i~~ 138 (343)
..|.+||.... ....+..+ ...+.+.+|+|++ +.|+..+.+ ..|++||+.+++... +....+.....+|
T Consensus 184 ~~l~i~D~~g~-~~~~lt~~-~~~v~~p~wSpDg-----~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~ 255 (433)
T PRK04922 184 YALQVADSDGY-NPQTILRS-AEPILSPAWSPDG-----KKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSF 255 (433)
T ss_pred EEEEEECCCCC-CceEeecC-CCccccccCCCCC-----CEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceE
Confidence 46899998644 44455556 6789999999999 677776643 469999998776432 3334445567899
Q ss_pred ecCCCEEE-EEeCCC--eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEe--CCc--EEEEEcccceeEEEecCC
Q 019326 139 HHSGKLAL-TVGRDD--CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT--EEK--VGIHQAEDAKLLCELDGK 211 (343)
Q Consensus 139 ~~~~~~l~-~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--i~~~d~~~~~~~~~~~~~ 211 (343)
+|+|+.++ +.+.+| .|++||+.+++..............+|+|+++.++... ++. +.++++.+++........
T Consensus 256 SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g 335 (433)
T PRK04922 256 SPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQG 335 (433)
T ss_pred CCCCCEEEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCC
Confidence 99998775 445555 59999998887544433334456689999999888773 333 666677666543332233
Q ss_pred cceEEeeec-CCCeEEEEeCCC---cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC---C
Q 019326 212 KRILCAAPG-ENGVLFTGGEDR---SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD---G 284 (343)
Q Consensus 212 ~~i~~~~~~-~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d---g 284 (343)
.......|+ +++.++..+.++ .|.+||+.+++.. .+. +........|+|++. +|+..+.+ +
T Consensus 336 ~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt--~~~~~~~p~~spdG~---------~i~~~s~~~g~~ 403 (433)
T PRK04922 336 NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT--PGSLDESPSFAPNGS---------MVLYATREGGRG 403 (433)
T ss_pred CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC--CCCCCCCceECCCCC---------EEEEEEecCCce
Confidence 334456777 456666554332 5999999877654 444 322345567877776 77666553 3
Q ss_pred cEEEEeccC
Q 019326 285 VICVWDVRM 293 (343)
Q Consensus 285 ~i~vwd~~~ 293 (343)
.|.++++..
T Consensus 404 ~L~~~~~~g 412 (433)
T PRK04922 404 VLAAVSTDG 412 (433)
T ss_pred EEEEEECCC
Confidence 577777754
No 229
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.62 E-value=6.7e-14 Score=109.49 Aligned_cols=252 Identities=19% Similarity=0.324 Sum_probs=188.3
Q ss_pred eeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEc-CCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee
Q 019326 31 TLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDL-STSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS 107 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~ 107 (343)
+...+..++||.+.|+....- .+-+++.+.|.++|+|-- +.++.-..+......+++++.+.+.. ..|+.|-
T Consensus 13 kp~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~-----~~L~vg~ 87 (404)
T KOG1409|consen 13 KPELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSES-----RRLYVGQ 87 (404)
T ss_pred chhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccc-----eEEEEEE
Confidence 345567788999999886665 678999999999999954 44554444543336889999999988 8999999
Q ss_pred CCCeEEEEEC----CCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCC
Q 019326 108 ADGFVSIFDA----DPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSG 183 (343)
Q Consensus 108 ~dg~i~iwd~----~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
.+|++.-+.+ +.....+....|...+..+-|+-....+++.+.|..+.-.-.+.+..+...........+.+.-.
T Consensus 88 ~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~- 166 (404)
T KOG1409|consen 88 DNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDAL- 166 (404)
T ss_pred ecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeE-
Confidence 9999998866 34456667778999999999999889999999998887666666665554444433333333322
Q ss_pred CEEEEE-eCCcEEEEEcc--cceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCce-eEEecccccccEE
Q 019326 184 EKFFMV-TEEKVGIHQAE--DAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKV-AYCIEDAHSARVK 257 (343)
Q Consensus 184 ~~~~~~-~~~~i~~~d~~--~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~h~~~v~ 257 (343)
+.+.+ ..+.+....+. .-.++.++. |...+.++.|.+ +.++++|..|..+.+||+.-.+- ..++. +|...|.
T Consensus 167 -~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~-gh~~kV~ 244 (404)
T KOG1409|consen 167 -YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQ-GHNDKVQ 244 (404)
T ss_pred -EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeec-cchhhhh
Confidence 44445 56666655443 334455555 889999999985 46899999999999999975543 34455 8999999
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCC
Q 019326 258 GIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKP 299 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 299 (343)
.+...+... .+++++.||.|.+|+.+....+.|
T Consensus 245 ~l~~~~~t~---------~l~S~~edg~i~~w~mn~~r~etp 277 (404)
T KOG1409|consen 245 ALSYAQHTR---------QLISCGEDGGIVVWNMNVKRVETP 277 (404)
T ss_pred hhhhhhhhe---------eeeeccCCCeEEEEeccceeecCc
Confidence 998887776 899999999999999987644333
No 230
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.62 E-value=3.1e-13 Score=112.65 Aligned_cols=270 Identities=16% Similarity=0.130 Sum_probs=188.4
Q ss_pred CCCCCeEEEEec--Cce-EEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEE-EeCCCCCCCCceEEEeeCCCeEEEE
Q 019326 40 AHLSPITTVAVS--GTA-AASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLA-FYTPQNLSVPRNLFSTSADGFVSIF 115 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~-~~~~~~~~~~~~l~s~~~dg~i~iw 115 (343)
.|...-+.|..+ |.+ +|+|..--.|++||+.+..+. |.-|-.+.+..+. .+.+- ..++.-..|.+|-+-
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLK--FERhlDae~V~feiLsDD~-----SK~v~L~~DR~IefH 121 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLK--FERHLDAEVVDFEILSDDY-----SKSVFLQNDRTIEFH 121 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceee--eeecccccceeEEEeccch-----hhheEeecCceeeeh
Confidence 467777888887 665 667788899999999865443 3333234444443 34333 456666677777654
Q ss_pred ECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC-CcceEEEEeCCCCEEEEE-eCCc
Q 019326 116 DADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG-KEASLIKFDGSGEKFFMV-TEEK 193 (343)
Q Consensus 116 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~ 193 (343)
..-. . ...++ -...-.+++++.-..-|++++....|+-++++.|+-+..+... ..++++.+++...+++++ .+|.
T Consensus 122 ak~G-~-hy~~R-IP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~ 198 (703)
T KOG2321|consen 122 AKYG-R-HYRTR-IPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGV 198 (703)
T ss_pred hhcC-e-eeeee-cCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCce
Confidence 3322 1 11111 1123355666655555666666778999999999987777666 789999999999999999 7999
Q ss_pred EEEEEcccceeEEEecC-------C-----cceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEE
Q 019326 194 VGIHQAEDAKLLCELDG-------K-----KRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIV 260 (343)
Q Consensus 194 i~~~d~~~~~~~~~~~~-------~-----~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~ 260 (343)
+..||.+....+..+.. + ..|+++.|++ +-.+++|+.+|.+.|||+++.+++..-..+...+|..+.
T Consensus 199 VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~ 278 (703)
T KOG2321|consen 199 VEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLD 278 (703)
T ss_pred EEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeec
Confidence 99999998877766652 2 2399999986 568999999999999999999988776645567889999
Q ss_pred EEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCC
Q 019326 261 VLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAP 332 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~ 332 (343)
|.+.++.. .++|. ....++|||-.+++ +...+.....++-+++-|++-++..+......
T Consensus 279 ~~~~~~q~-------~v~S~-Dk~~~kiWd~~~Gk-----~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m 337 (703)
T KOG2321|consen 279 WQDTDQQN-------KVVSM-DKRILKIWDECTGK-----PMASIEPTSDLNDFCFVPGSGMFFTANESSKM 337 (703)
T ss_pred ccccCCCc-------eEEec-chHHhhhcccccCC-----ceeeccccCCcCceeeecCCceEEEecCCCcc
Confidence 98774322 56555 34689999999885 33444444557778877776666655555433
No 231
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.61 E-value=1.3e-13 Score=109.66 Aligned_cols=207 Identities=15% Similarity=0.150 Sum_probs=154.2
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCC--CeEEEEEcCCCeeee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTD--DTIHLYDLSTSSSLG 76 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~d--g~i~iwd~~~~~~~~ 76 (343)
.|+++..+|.+.+|........ -.++..+..+ ..+..|.-. ..++++|+.. ..+.+||+++.+.+.
T Consensus 117 ~Litc~~sG~l~~~~~k~~d~h--------ss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw 187 (412)
T KOG3881|consen 117 TLITCVSSGNLQVRHDKSGDLH--------SSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIW 187 (412)
T ss_pred EEEEEecCCcEEEEeccCCccc--------cccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeee
Confidence 4788899999999998852110 1222222222 344455444 6788889998 889999999886666
Q ss_pred EeccCC--------CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC-cceeeeeeeccccEEEEEEecCCCEEEE
Q 019326 77 AIHHHE--------SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP-FVLLTSVKVHKKGVNDLAVHHSGKLALT 147 (343)
Q Consensus 77 ~~~~~~--------~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 147 (343)
.-+.-. .-.++++.|.+... +..|++++.-+.+++||.+. .+++..+..-..+++++...|.++.+++
T Consensus 188 ~aKNvpnD~L~LrVPvW~tdi~Fl~g~~---~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~ 264 (412)
T KOG3881|consen 188 SAKNVPNDRLGLRVPVWITDIRFLEGSP---NYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYT 264 (412)
T ss_pred eccCCCCccccceeeeeeccceecCCCC---CceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEE
Confidence 543321 23467888888721 27899999999999999965 4578888878889999999999999999
Q ss_pred EeCCCeEEEEEccCCceeEE--EEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeec
Q 019326 148 VGRDDCLAMVNLVRGRRSFY--HKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPG 220 (343)
Q Consensus 148 ~~~d~~i~~wd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~ 220 (343)
|..-|.+..+|++.++.... ....+.+..+..+|..++++.+ -|..++|+|+.+.+++...--...++++.+.
T Consensus 265 gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~lt~il~~ 340 (412)
T KOG3881|consen 265 GNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSRLTFILLR 340 (412)
T ss_pred ecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhccccEEEec
Confidence 99999999999999886543 3445788888899988888888 8888999988886666555445555555553
No 232
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.60 E-value=4.4e-13 Score=102.44 Aligned_cols=136 Identities=13% Similarity=0.216 Sum_probs=98.6
Q ss_pred CeEEEEEcCC-CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEE--eeCCCeEEEEECCCcceeeeeeeccccEEEEEE
Q 019326 62 DTIHLYDLST-SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFS--TSADGFVSIFDADPFVLLTSVKVHKKGVNDLAV 138 (343)
Q Consensus 62 g~i~iwd~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~ 138 (343)
|...+|.++. +.....+.....++|.+++|+|++ +.|++ |..++.|.+||++ ++.+..+. ...+..+.|
T Consensus 37 ~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g-----~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~w 108 (194)
T PF08662_consen 37 GEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNG-----NEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISW 108 (194)
T ss_pred eeEEEEEEecCCCccceeeccCCCceEEEEECcCC-----CEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEE
Confidence 3455555532 334444544324679999999999 56543 4467899999997 46666553 567889999
Q ss_pred ecCCCEEEEEeC---CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-e------CCcEEEEEcccceeEEE
Q 019326 139 HHSGKLALTVGR---DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-T------EEKVGIHQAEDAKLLCE 207 (343)
Q Consensus 139 ~~~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~i~~~d~~~~~~~~~ 207 (343)
+|+|+++++++. .|.+.+||.++.+.+....+. .+..++|+|+|++++++ . |+.++||+.. |+.+..
T Consensus 109 sP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~ 185 (194)
T PF08662_consen 109 SPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYK 185 (194)
T ss_pred CCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEe
Confidence 999999999875 467999999988877665554 46789999999999998 3 6778888874 444443
No 233
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.59 E-value=1.3e-12 Score=113.64 Aligned_cols=228 Identities=11% Similarity=-0.018 Sum_probs=150.0
Q ss_pred eEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeC---CCeEEEEEcCCCeeeeEeccCCCCC
Q 019326 11 FIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGT---DDTIHLYDLSTSSSLGAIHHHESSS 85 (343)
Q Consensus 11 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~ 85 (343)
.|.++|... .....+..|...+.+.+|+ |+.|+..+. +..|.+||+.+++.. .+..+ ...
T Consensus 183 ~l~~~d~dg-------------~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~-~g~ 247 (435)
T PRK05137 183 RLAIMDQDG-------------ANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNF-PGM 247 (435)
T ss_pred EEEEECCCC-------------CCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecC-CCc
Confidence 677777654 1223344678899999999 777777653 468999999887653 34444 567
Q ss_pred eEEEEEeCCCCCCCCceE-EEeeCCCe--EEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC-C--CeEEEEEc
Q 019326 86 VTSLAFYTPQNLSVPRNL-FSTSADGF--VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-D--DCLAMVNL 159 (343)
Q Consensus 86 v~~l~~~~~~~~~~~~~l-~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-d--~~i~~wd~ 159 (343)
+...+|+|++ +.| ++.+.++. |++||+.+++. ..+..+........|+|+|+.|+..+. + ..|+++|+
T Consensus 248 ~~~~~~SPDG-----~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~ 321 (435)
T PRK05137 248 TFAPRFSPDG-----RKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA 321 (435)
T ss_pred ccCcEECCCC-----CEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence 7889999999 555 46666654 77789887654 445545566778999999998887764 3 36888898
Q ss_pred cCCceeEEEEcCCcceEEEEeCCCCEEEEE-e-C--CcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEeC-C--
Q 019326 160 VRGRRSFYHKIGKEASLIKFDGSGEKFFMV-T-E--EKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGGE-D-- 231 (343)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~--~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~-d-- 231 (343)
..++...............|+|+|+.++.. . . ..+.+||+..+. .+.+.....+....|++ ++.++..+. .
T Consensus 322 ~g~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~~~~~~~p~~spDG~~i~~~~~~~~~ 400 (435)
T PRK05137 322 DGSNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILTSGFLVEGPTWAPNGRVIMFFRQTPGS 400 (435)
T ss_pred CCCCeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEeccCCCCCCCCeECCCCCEEEEEEccCCC
Confidence 776654443334556668899999999877 2 2 357788875543 34444333466777884 555554333 2
Q ss_pred ---CcEEEEECCCCceeEEecccccccEEEEEEEe
Q 019326 232 ---RSITAWDTNSGKVAYCIEDAHSARVKGIVVLT 263 (343)
Q Consensus 232 ---g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~ 263 (343)
..++++|+..+.. ..+. ....+...+|+|
T Consensus 401 ~~~~~L~~~dl~g~~~-~~l~--~~~~~~~p~Wsp 432 (435)
T PRK05137 401 GGAPKLYTVDLTGRNE-REVP--TPGDASDPAWSP 432 (435)
T ss_pred CCcceEEEEECCCCce-EEcc--CCCCccCcccCC
Confidence 3578888875543 4444 233445556654
No 234
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.59 E-value=1e-12 Score=113.72 Aligned_cols=216 Identities=14% Similarity=0.117 Sum_probs=138.1
Q ss_pred ecCCCCCeEEEEec--CceEEEeeCC---CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEE-EeeCCCe
Q 019326 38 YPAHLSPITTVAVS--GTAAASGGTD---DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLF-STSADGF 111 (343)
Q Consensus 38 ~~~h~~~v~~l~~~--~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~-s~~~dg~ 111 (343)
+..+...+.+.+|+ |+.|+..+.+ ..|.+||+.+++... +... ...+...+|+|++ +.|+ +.+.+|.
T Consensus 191 l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~-~g~~~~~~~SPDG-----~~la~~~~~~g~ 263 (427)
T PRK02889 191 ALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANF-KGSNSAPAWSPDG-----RTLAVALSRDGN 263 (427)
T ss_pred eccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecC-CCCccceEECCCC-----CEEEEEEccCCC
Confidence 34577889999998 7778776543 459999999886543 3333 3556789999999 5554 6677887
Q ss_pred EEEEE--CCCcceeeeeeeccccEEEEEEecCCCEEEEEeC-CCeEEEEEc--cCCceeEEEEcCCcceEEEEeCCCCEE
Q 019326 112 VSIFD--ADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-DDCLAMVNL--VRGRRSFYHKIGKEASLIKFDGSGEKF 186 (343)
Q Consensus 112 i~iwd--~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-d~~i~~wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (343)
..+|. +.++. ...+..+........|+|||+.|+..+. ++...+|.+ .++................|+|+|+++
T Consensus 264 ~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~I 342 (427)
T PRK02889 264 SQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLL 342 (427)
T ss_pred ceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEE
Confidence 66665 44443 4445445555677899999998876654 455566654 444432222222334457899999999
Q ss_pred EEE-eCC---cEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeC-CC--cEEEEECCCCceeEEecccccccEEE
Q 019326 187 FMV-TEE---KVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGE-DR--SITAWDTNSGKVAYCIEDAHSARVKG 258 (343)
Q Consensus 187 ~~~-~~~---~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~h~~~v~~ 258 (343)
+.. .++ .|.+||+.+++... +..........|+ +++.|+..+. .| .+.+.+. ++.....+. .+.+.+..
T Consensus 343 a~~s~~~g~~~I~v~d~~~g~~~~-lt~~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~-~~~g~~~~ 419 (427)
T PRK02889 343 AYISRVGGAFKLYVQDLATGQVTA-LTDTTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRLS-VQGGDVRE 419 (427)
T ss_pred EEEEccCCcEEEEEEECCCCCeEE-ccCCCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEee-cCCCCCCC
Confidence 877 333 58999998876543 3322334566777 4555555543 33 3556666 355555665 56666677
Q ss_pred EEEEec
Q 019326 259 IVVLTK 264 (343)
Q Consensus 259 ~~~~~~ 264 (343)
.+|+|.
T Consensus 420 p~wsp~ 425 (427)
T PRK02889 420 PSWGPF 425 (427)
T ss_pred CccCCC
Confidence 777653
No 235
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.58 E-value=7.8e-12 Score=107.06 Aligned_cols=252 Identities=14% Similarity=0.126 Sum_probs=164.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEE-EEecCceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITT-VAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
++++++.+|.|+.+|..+ ++.. ..... .+.+.+ ....++.++.++.+|.|..||.++++.+..+..
T Consensus 107 ~v~v~~~~g~l~ald~~t-------G~~~-----W~~~~-~~~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 173 (377)
T TIGR03300 107 LVFVGTEKGEVIALDAED-------GKEL-----WRAKL-SSEVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTYSR 173 (377)
T ss_pred EEEEEcCCCEEEEEECCC-------CcEe-----eeecc-CceeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEEcc
Confidence 467888899999999876 2221 11111 122222 222367788888899999999999999888765
Q ss_pred CCCCCeE-----EEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccc-------cEEEEEEec--CCCEEE
Q 019326 81 HESSSVT-----SLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKK-------GVNDLAVHH--SGKLAL 146 (343)
Q Consensus 81 ~~~~~v~-----~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------~v~~i~~~~--~~~~l~ 146 (343)
. ...+. +.... + ..++.+..++.+..+|.++++.+.+...... ....+.-+| .+..++
T Consensus 174 ~-~~~~~~~~~~sp~~~-~------~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy 245 (377)
T TIGR03300 174 V-TPALTLRGSASPVIA-D------GGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVY 245 (377)
T ss_pred C-CCceeecCCCCCEEE-C------CEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEE
Confidence 4 22111 11111 2 3677888899999999999887765432110 000011111 245788
Q ss_pred EEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCc-ceEEeeecCCC
Q 019326 147 TVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKK-RILCAAPGENG 223 (343)
Q Consensus 147 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~-~i~~~~~~~~~ 223 (343)
+++.+|.++.+|.++++.......... .... ..+..++++ .++.+..+|..+++.+.... ... ...+... .++
T Consensus 246 ~~~~~g~l~a~d~~tG~~~W~~~~~~~-~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i-~g~ 321 (377)
T TIGR03300 246 AVSYQGRVAALDLRSGRVLWKRDASSY-QGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV-VGG 321 (377)
T ss_pred EEEcCCEEEEEECCCCcEEEeeccCCc-cCce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE-ECC
Confidence 888899999999999987766553321 1122 245566666 89999999999998887663 111 1222222 466
Q ss_pred eEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 224 VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 224 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
.+++++.+|.|+++|..+++.+.+++ .+...+..--...++ .|+.++.||.|..|
T Consensus 322 ~l~~~~~~G~l~~~d~~tG~~~~~~~-~~~~~~~~sp~~~~~----------~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 322 YLVVGDFEGYLHWLSREDGSFVARLK-TDGSGIASPPVVVGD----------GLLVQTRDGDLYAF 376 (377)
T ss_pred EEEEEeCCCEEEEEECCCCCEEEEEE-cCCCccccCCEEECC----------EEEEEeCCceEEEe
Confidence 88899999999999999999999888 555443333223333 68889999998876
No 236
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.58 E-value=8.2e-12 Score=105.00 Aligned_cols=186 Identities=13% Similarity=0.133 Sum_probs=134.0
Q ss_pred ceE-EEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEE
Q 019326 101 RNL-FSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKF 179 (343)
Q Consensus 101 ~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 179 (343)
+++ ++-..++.|.+.|..+.+.+.++......-..+.|+||++++++++.||.|.++|+.+++.+...........+++
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~ 85 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAV 85 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEE
Confidence 344 4566689999999999999999986555555678999999999999999999999999999999999999999999
Q ss_pred eCCCCEEEEE--eCCcEEEEEcccceeEEEecC--------CcceEEeeecC-CC-eEEEEeCCCcEEEEECCCCceeEE
Q 019326 180 DGSGEKFFMV--TEEKVGIHQAEDAKLLCELDG--------KKRILCAAPGE-NG-VLFTGGEDRSITAWDTNSGKVAYC 247 (343)
Q Consensus 180 ~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~--------~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~~ 247 (343)
+++|++++++ ..+.+.++|.++.++++.+.. ...+..+..++ .. ++++--+.+.|.+.|....+.+..
T Consensus 86 s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~ 165 (369)
T PF02239_consen 86 SPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKV 165 (369)
T ss_dssp --TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEE
T ss_pred cCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccce
Confidence 9999999988 799999999999999998862 23456666554 34 444555568898889877654432
Q ss_pred ecccccccEEEEEEEecCCCCCCCCCCeEEE-EEcCCCcEEEEeccCcc
Q 019326 248 IEDAHSARVKGIVVLTKNDGGSTAENPYLVA-SASSDGVICVWDVRMAI 295 (343)
Q Consensus 248 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~ 295 (343)
-............|.|++. +++ +...++.|-++|.++.+
T Consensus 166 ~~i~~g~~~~D~~~dpdgr---------y~~va~~~sn~i~viD~~~~k 205 (369)
T PF02239_consen 166 TTIKVGRFPHDGGFDPDGR---------YFLVAANGSNKIAVIDTKTGK 205 (369)
T ss_dssp EEEE--TTEEEEEE-TTSS---------EEEEEEGGGTEEEEEETTTTE
T ss_pred eeecccccccccccCcccc---------eeeecccccceeEEEeeccce
Confidence 2113456677888988876 554 45667789999988764
No 237
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.56 E-value=9.8e-13 Score=116.81 Aligned_cols=139 Identities=22% Similarity=0.268 Sum_probs=119.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeee-Ee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLG-AI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~-~~ 78 (343)
.+++|+.-+.|.+|+.... .....+.||.+.|.++.++ |.++++.+.|.++|+|++++.+... ..
T Consensus 147 ~i~~gsv~~~iivW~~~~d------------n~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~ 214 (967)
T KOG0974|consen 147 YIASGSVFGEIIVWKPHED------------NKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTG 214 (967)
T ss_pred EEEeccccccEEEEecccc------------CCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCccc
Confidence 5788999999999998741 1112677999999999997 9999999999999999999988776 56
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccc-cEEEEEEecCCCEEEEEeCCCeEEEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKK-GVNDLAVHHSGKLALTVGRDDCLAMV 157 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~i~~~~~~~~l~~~~~d~~i~~w 157 (343)
-+| ...|..+.|.|+ .+++++.|.+.++|+... +.+..+.+|.+ .+..++..++...+++++.|+.+++|
T Consensus 215 fgH-saRvw~~~~~~n-------~i~t~gedctcrvW~~~~-~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~ 285 (967)
T KOG0974|consen 215 FGH-SARVWACCFLPN-------RIITVGEDCTCRVWGVNG-TQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLW 285 (967)
T ss_pred ccc-cceeEEEEeccc-------eeEEeccceEEEEEeccc-ceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhh
Confidence 678 999999999986 599999999999997654 45557888865 79999999999999999999999999
Q ss_pred EccC
Q 019326 158 NLVR 161 (343)
Q Consensus 158 d~~~ 161 (343)
|+..
T Consensus 286 ~l~~ 289 (967)
T KOG0974|consen 286 DLNG 289 (967)
T ss_pred hhhc
Confidence 9864
No 238
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=5.8e-12 Score=109.08 Aligned_cols=210 Identities=11% Similarity=0.035 Sum_probs=130.2
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC---CeEEEEECCCcceeeeeeeccccEEEEEE
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD---GFVSIFDADPFVLLTSVKVHKKGVNDLAV 138 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~i~~ 138 (343)
..|.++|.+ +.....+..+ ...+.+.+|+|++ +.|+..+.+ ..|.+||+.+++... +....+.+...+|
T Consensus 176 ~~L~~~D~d-G~~~~~l~~~-~~~v~~p~wSPDG-----~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~ 247 (427)
T PRK02889 176 YQLQISDAD-GQNAQSALSS-PEPIISPAWSPDG-----TKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAW 247 (427)
T ss_pred cEEEEECCC-CCCceEeccC-CCCcccceEcCCC-----CEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEE
Confidence 457777764 4444455556 6789999999999 677766543 369999998876543 3334455678999
Q ss_pred ecCCCEEE-EEeCCCeEEEEE--ccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEc--ccceeEEEecCC
Q 019326 139 HHSGKLAL-TVGRDDCLAMVN--LVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQA--EDAKLLCELDGK 211 (343)
Q Consensus 139 ~~~~~~l~-~~~~d~~i~~wd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~--~~~~~~~~~~~~ 211 (343)
+|+|+.|+ +.+.+|...+|. +..+................|+|+|+.++.. .++...+|.+ .+++........
T Consensus 248 SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g 327 (427)
T PRK02889 248 SPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTG 327 (427)
T ss_pred CCCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCC
Confidence 99998876 456677766655 4444432222223334567899999988766 3455566654 444432222222
Q ss_pred cceEEeeec-CCCeEEEEeCCC---cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCC-c-
Q 019326 212 KRILCAAPG-ENGVLFTGGEDR---SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG-V- 285 (343)
Q Consensus 212 ~~i~~~~~~-~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg-~- 285 (343)
.......|+ ++++++..+.++ .|.+||+.+++.. .+. .........|+|++. +|+.++.++ .
T Consensus 328 ~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~-~lt--~~~~~~~p~~spdg~---------~l~~~~~~~g~~ 395 (427)
T PRK02889 328 SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT-ALT--DTTRDESPSFAPNGR---------YILYATQQGGRS 395 (427)
T ss_pred CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE-Ecc--CCCCccCceECCCCC---------EEEEEEecCCCE
Confidence 223345677 567777665543 6999999887643 343 122345677888776 777666543 3
Q ss_pred -EEEEec
Q 019326 286 -ICVWDV 291 (343)
Q Consensus 286 -i~vwd~ 291 (343)
+.+.++
T Consensus 396 ~l~~~~~ 402 (427)
T PRK02889 396 VLAAVSS 402 (427)
T ss_pred EEEEEEC
Confidence 444444
No 239
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.55 E-value=2.6e-12 Score=98.25 Aligned_cols=154 Identities=12% Similarity=0.217 Sum_probs=109.1
Q ss_pred EEEEEeCCCCCCCCceEEEeeC----------CCeEEEEECCC-cceeeeeee-ccccEEEEEEecCCCEEEEE--eCCC
Q 019326 87 TSLAFYTPQNLSVPRNLFSTSA----------DGFVSIFDADP-FVLLTSVKV-HKKGVNDLAVHHSGKLALTV--GRDD 152 (343)
Q Consensus 87 ~~l~~~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~-~~~~~~~~~-~~~~v~~i~~~~~~~~l~~~--~~d~ 152 (343)
..+.|++.| ++|+.-.. -+...+|.++. ...+..+.. ..++|.+++|+|+++.|++. ..++
T Consensus 9 ~~~~W~~~G-----~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~ 83 (194)
T PF08662_consen 9 AKLHWQPSG-----DYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPA 83 (194)
T ss_pred EEEEecccC-----CEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCc
Confidence 357788887 34433222 13455555522 234445543 34579999999999887654 3567
Q ss_pred eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEe----CCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEE
Q 019326 153 CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT----EEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFT 227 (343)
Q Consensus 153 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~ 227 (343)
.|.+||++ ++.+.... ...+..+.|+|+|++++++. .|.+.+||.++.+.+....+.. ++.++|+| ++++++
T Consensus 84 ~v~lyd~~-~~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~-~t~~~WsPdGr~~~t 160 (194)
T PF08662_consen 84 KVTLYDVK-GKKIFSFG-TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSD-ATDVEWSPDGRYLAT 160 (194)
T ss_pred ccEEEcCc-ccEeEeec-CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCc-EEEEEEcCCCCEEEE
Confidence 99999996 44444443 46778899999999999982 4679999999999988887665 67899994 678887
Q ss_pred EeC------CCcEEEEECCCCceeEEec
Q 019326 228 GGE------DRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 228 ~~~------dg~i~i~d~~~~~~~~~~~ 249 (343)
+.. |+.++||+.. |+.+....
T Consensus 161 a~t~~r~~~dng~~Iw~~~-G~~l~~~~ 187 (194)
T PF08662_consen 161 ATTSPRLRVDNGFKIWSFQ-GRLLYKKP 187 (194)
T ss_pred EEeccceeccccEEEEEec-CeEeEecc
Confidence 764 7889999985 77666544
No 240
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.53 E-value=1.5e-13 Score=113.99 Aligned_cols=207 Identities=14% Similarity=0.180 Sum_probs=148.4
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeee-eccccEEEEEEecC--CCEEEEEeC
Q 019326 74 SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK-VHKKGVNDLAVHHS--GKLALTVGR 150 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~i~~~~~--~~~l~~~~~ 150 (343)
+..++.+| ++.|++|.|+.+| .+|++|+.|-.+.|||.-..+++..+. +|...|.++.|-|. .+.+++|..
T Consensus 42 lE~eL~GH-~GCVN~LeWn~dG-----~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAg 115 (758)
T KOG1310|consen 42 LEAELTGH-TGCVNCLEWNADG-----ELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAG 115 (758)
T ss_pred hhhhhccc-cceecceeecCCC-----CEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccC
Confidence 44678899 9999999999999 899999999999999998878887774 79999999999984 578999999
Q ss_pred CCeEEEEEccCCcee----------E-EEEcCCcceEEEEeCCC-CEEEEE-eCCcEEEEEcccceeEEEe-------c-
Q 019326 151 DDCLAMVNLVRGRRS----------F-YHKIGKEASLIKFDGSG-EKFFMV-TEEKVGIHQAEDAKLLCEL-------D- 209 (343)
Q Consensus 151 d~~i~~wd~~~~~~~----------~-~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~~~d~~~~~~~~~~-------~- 209 (343)
|..|+++|+...+.- . ..-+...+..++..|++ ..+.++ .||.++.||++.......- .
T Consensus 116 Dk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~n 195 (758)
T KOG1310|consen 116 DKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVN 195 (758)
T ss_pred cceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHH
Confidence 999999999853211 1 11123556778888888 556666 9999999999874321110 0
Q ss_pred ---CCcceEEeeecC--CCeEEEEeCCCcEEEEECCC--------Cc----------eeEEeccccc--------c---c
Q 019326 210 ---GKKRILCAAPGE--NGVLFTGGEDRSITAWDTNS--------GK----------VAYCIEDAHS--------A---R 255 (343)
Q Consensus 210 ---~~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~--------~~----------~~~~~~~~h~--------~---~ 255 (343)
.--...|+.+++ ..+|++|+.|-..++||.+. +. ++.-+..+|. . .
T Consensus 196 y~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~ 275 (758)
T KOG1310|consen 196 YNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITC 275 (758)
T ss_pred hchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceee
Confidence 123456677764 56999999999999999432 11 1222222332 1 2
Q ss_pred EEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 256 VKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 256 v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
++-+.|+|++.+ +|++-+.+ .|+++|+..++
T Consensus 276 ~t~vtfnpNGtE--------lLvs~~gE-hVYlfdvn~~~ 306 (758)
T KOG1310|consen 276 CTYVTFNPNGTE--------LLVSWGGE-HVYLFDVNEDK 306 (758)
T ss_pred eEEEEECCCCcE--------EEEeeCCe-EEEEEeecCCC
Confidence 455677777652 55555544 79999998764
No 241
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.53 E-value=7.5e-13 Score=117.52 Aligned_cols=188 Identities=16% Similarity=0.173 Sum_probs=149.3
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEE---EeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeee
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLA---FYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKV 128 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~---~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 128 (343)
...++.+..+..+.+||...+.....+...+.....+.. ++++. -++++|+.-+.|.+|+....+.-..+.+
T Consensus 99 ~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~-----~~i~~gsv~~~iivW~~~~dn~p~~l~G 173 (967)
T KOG0974|consen 99 NKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEE-----LYIASGSVFGEIIVWKPHEDNKPIRLKG 173 (967)
T ss_pred cceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcE-----EEEEeccccccEEEEeccccCCcceecc
Confidence 456888888899999999988877777655233333332 33443 6899999999999999964343346889
Q ss_pred ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEe
Q 019326 129 HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCEL 208 (343)
Q Consensus 129 ~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 208 (343)
|.+.|.++.++-+|+++++.+.|.++++|++.+.+... ..-+
T Consensus 174 HeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~--------------------------------------~~~f 215 (967)
T KOG0974|consen 174 HEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG--------------------------------------CTGF 215 (967)
T ss_pred cCCceEEEEEccCCcEEEEEecCcceeeeecccccccC--------------------------------------cccc
Confidence 99999999999999999999999999999999877432 1233
Q ss_pred cCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccc-cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEE
Q 019326 209 DGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAH-SARVKGIVVLTKNDGGSTAENPYLVASASSDGVIC 287 (343)
Q Consensus 209 ~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~ 287 (343)
.|...+..+++.+. .+++++.|-+.++|+.. ++.+..+. .| ...|..++..+... .++|++.||.++
T Consensus 216 gHsaRvw~~~~~~n-~i~t~gedctcrvW~~~-~~~l~~y~-~h~g~~iw~~~~~~~~~---------~~vT~g~Ds~lk 283 (967)
T KOG0974|consen 216 GHSARVWACCFLPN-RIITVGEDCTCRVWGVN-GTQLEVYD-EHSGKGIWKIAVPIGVI---------IKVTGGNDSTLK 283 (967)
T ss_pred cccceeEEEEeccc-eeEEeccceEEEEEecc-cceehhhh-hhhhcceeEEEEcCCce---------EEEeeccCcchh
Confidence 57777788888766 99999999999999766 66666777 55 46799999988876 999999999999
Q ss_pred EEeccCc
Q 019326 288 VWDVRMA 294 (343)
Q Consensus 288 vwd~~~~ 294 (343)
+|++...
T Consensus 284 ~~~l~~r 290 (967)
T KOG0974|consen 284 LWDLNGR 290 (967)
T ss_pred hhhhhcc
Confidence 9999765
No 242
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.51 E-value=2.2e-11 Score=105.94 Aligned_cols=201 Identities=16% Similarity=0.096 Sum_probs=130.7
Q ss_pred cCCCCCeEEEEec--CceEEEeeCC---CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEE-EeeCCC--
Q 019326 39 PAHLSPITTVAVS--GTAAASGGTD---DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLF-STSADG-- 110 (343)
Q Consensus 39 ~~h~~~v~~l~~~--~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~-s~~~dg-- 110 (343)
..+...+.+.+|+ +++|+.+..+ ..|++||+.+++.... ..+ ...+.+++|+|++ +.|+ +.+.++
T Consensus 186 ~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~-~~~-~~~~~~~~~spDg-----~~l~~~~~~~~~~ 258 (417)
T TIGR02800 186 TRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV-ASF-PGMNGAPAFSPDG-----SKLAVSLSKDGNP 258 (417)
T ss_pred ecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe-ecC-CCCccceEECCCC-----CEEEEEECCCCCc
Confidence 3466678888998 7888876643 4799999998765433 334 4567779999998 5554 555544
Q ss_pred eEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC-C--eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEE
Q 019326 111 FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD-D--CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d-~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
.|++||+.+++. ..+..+........|+|+++.|+..+.. + .|+++|+.+++...............|+|++++++
T Consensus 259 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~~~spdg~~i~ 337 (417)
T TIGR02800 259 DIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGGYNASPSWSPDGDLIA 337 (417)
T ss_pred cEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccCeEECCCCCEEE
Confidence 588899887654 3333344455567899999988766543 2 68888888776544443445567789999999988
Q ss_pred EE-eCC---cEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCC---cEEEEECCCCceeEEec
Q 019326 188 MV-TEE---KVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDR---SITAWDTNSGKVAYCIE 249 (343)
Q Consensus 188 ~~-~~~---~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~ 249 (343)
.. .++ .|.+||+.++.. ..+..........|+ +++.|+..+.++ .+++.+.. +.....+.
T Consensus 338 ~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~-g~~~~~~~ 405 (417)
T TIGR02800 338 FVHREGGGFNIAVMDLDGGGE-RVLTDTGLDESPSFAPNGRMILYATTRGGRGVLGLVSTD-GRFRARLP 405 (417)
T ss_pred EEEccCCceEEEEEeCCCCCe-EEccCCCCCCCceECCCCCEEEEEEeCCCcEEEEEEECC-CceeeECC
Confidence 88 443 688888887543 333322223344566 455665555443 35555543 45555554
No 243
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.50 E-value=3.9e-12 Score=97.74 Aligned_cols=189 Identities=18% Similarity=0.197 Sum_probs=133.2
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCee--eeEe
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSS--LGAI 78 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~--~~~~ 78 (343)
|+-+-..|.|.+|..... .+...+.++...+-......++.|+ +..++++..+|.+.+-+...... ++.+
T Consensus 88 l~~a~a~G~i~~~r~~~~------~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~w 161 (339)
T KOG0280|consen 88 LLDAHARGQIQLYRNDED------ESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTW 161 (339)
T ss_pred eeeccccceEEEEeeccc------eeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccc
Confidence 455556777777766541 1111222222111111123345565 77899999999998666555544 3478
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC-Ccceeee-eeeccccEEEEEEecC-CCEEEEEeCCCeEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD-PFVLLTS-VKVHKKGVNDLAVHHS-GKLALTVGRDDCLA 155 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~-~~~~~~~v~~i~~~~~-~~~l~~~~~d~~i~ 155 (343)
+.| .-+.+...|+... |+.+.+|+.|+.+..||++ .++.+.. .+-|...|.+|.-+|. ..++++|+.|..|+
T Consensus 162 k~H-e~E~Wta~f~~~~----pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~ 236 (339)
T KOG0280|consen 162 KVH-EFEAWTAKFSDKE----PNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIR 236 (339)
T ss_pred ccc-ceeeeeeecccCC----CceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEecccccee
Confidence 889 8999999998776 5899999999999999998 4445544 5678899999988874 68999999999999
Q ss_pred EEEcc-CCceeEEEEcCCcceEEEEeCCCC--EEEEEeCCcEEEEEcccc
Q 019326 156 MVNLV-RGRRSFYHKIGKEASLIKFDGSGE--KFFMVTEEKVGIHQAEDA 202 (343)
Q Consensus 156 ~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~d~~~~ 202 (343)
+||.+ -++++......+.|..+..+|.-. .++++.-+..++.+.+..
T Consensus 237 ~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~ 286 (339)
T KOG0280|consen 237 VLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDK 286 (339)
T ss_pred eeehhcccCccccCccccceEEEEecchhhhHHHHHHHhcCceEEEeccc
Confidence 99999 567777777788899999998544 444445555666666554
No 244
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.50 E-value=2.3e-11 Score=102.04 Aligned_cols=189 Identities=12% Similarity=0.075 Sum_probs=148.5
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccC--CCCCeEEEEEeCC--CC-------------CCCCceEEEeeCCCeEEE
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHH--ESSSVTSLAFYTP--QN-------------LSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~l~~~~~--~~-------------~~~~~~l~s~~~dg~i~i 114 (343)
..++|....||.+|+|+..+++....|... -.+...+..|.-. .. ......++-|...|.|.+
T Consensus 5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ 84 (541)
T KOG4547|consen 5 LDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLL 84 (541)
T ss_pred hheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEE
Confidence 468999999999999999999888777532 1344455555311 00 022357888899999999
Q ss_pred EECCCcceeeeee--eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC-CcceEEEEeCCCCEEEEEeC
Q 019326 115 FDADPFVLLTSVK--VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG-KEASLIKFDGSGEKFFMVTE 191 (343)
Q Consensus 115 wd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 191 (343)
|+...++....+. .|.+.|.++.++.+-..|.+++.|+.+..|+....+........ ..+..++++|++..++++ .
T Consensus 85 ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~a-s 163 (541)
T KOG4547|consen 85 YSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTA-S 163 (541)
T ss_pred EEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEec-c
Confidence 9999999888776 58899999999999999999999999999999988877766554 668889999998877764 5
Q ss_pred CcEEEEEcccceeEEEec-CCcceEEeeec-C-----CCeEEE-EeCCCcEEEEECCC
Q 019326 192 EKVGIHQAEDAKLLCELD-GKKRILCAAPG-E-----NGVLFT-GGEDRSITAWDTNS 241 (343)
Q Consensus 192 ~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~-----~~~l~~-~~~dg~i~i~d~~~ 241 (343)
+.|++||+++.+.+..+. |.++|.++.|. . +.++++ ...+..+.+|-...
T Consensus 164 ~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 164 RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 789999999999999999 78899999986 2 345554 44566677886654
No 245
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.49 E-value=3.4e-11 Score=104.75 Aligned_cols=211 Identities=9% Similarity=0.036 Sum_probs=137.8
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC---CeEEEEECCCcceeeeeeeccccEEEEEE
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD---GFVSIFDADPFVLLTSVKVHKKGVNDLAV 138 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~i~~ 138 (343)
..|.++|..... ...+..+ ...+....|+|++ ++|+.+..+ ..|++||+.+++... +..+.+.+.+++|
T Consensus 170 ~~l~~~d~~g~~-~~~l~~~-~~~~~~p~~Spdg-----~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~ 241 (417)
T TIGR02800 170 YELQVADYDGAN-PQTITRS-REPILSPAWSPDG-----QKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAF 241 (417)
T ss_pred ceEEEEcCCCCC-CEEeecC-CCceecccCCCCC-----CEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEE
Confidence 358888876443 4445555 5678899999999 677776643 479999998875433 3335566777999
Q ss_pred ecCCCEEEE-EeCCC--eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEe--CC--cEEEEEcccceeEEEecCC
Q 019326 139 HHSGKLALT-VGRDD--CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT--EE--KVGIHQAEDAKLLCELDGK 211 (343)
Q Consensus 139 ~~~~~~l~~-~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~i~~~d~~~~~~~~~~~~~ 211 (343)
+|+++.|+. .+.++ .|++||+.+++...............|+|+++.++... .+ .|.++++.+++......+.
T Consensus 242 spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~ 321 (417)
T TIGR02800 242 SPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRG 321 (417)
T ss_pred CCCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCC
Confidence 999987764 44443 58899998876544433333445678999999887662 22 5777888776654433345
Q ss_pred cceEEeeec-CCCeEEEEeCCC---cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCC---
Q 019326 212 KRILCAAPG-ENGVLFTGGEDR---SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG--- 284 (343)
Q Consensus 212 ~~i~~~~~~-~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg--- 284 (343)
.......|+ ++++++.++.++ .|.+||+.++.. ..+. .. .......|+|++. +|+..+.++
T Consensus 322 ~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~-~~-~~~~~p~~spdg~---------~l~~~~~~~~~~ 389 (417)
T TIGR02800 322 GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-RVLT-DT-GLDESPSFAPNGR---------MILYATTRGGRG 389 (417)
T ss_pred CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-EEcc-CC-CCCCCceECCCCC---------EEEEEEeCCCcE
Confidence 556667787 466777776665 789999887543 3333 12 2234456777765 777766654
Q ss_pred cEEEEecc
Q 019326 285 VICVWDVR 292 (343)
Q Consensus 285 ~i~vwd~~ 292 (343)
.+.+.+..
T Consensus 390 ~l~~~~~~ 397 (417)
T TIGR02800 390 VLGLVSTD 397 (417)
T ss_pred EEEEEECC
Confidence 34444543
No 246
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.49 E-value=7.5e-10 Score=93.26 Aligned_cols=258 Identities=15% Similarity=0.161 Sum_probs=165.5
Q ss_pred EEEeeCC----CeEEEEEc--CCCeee--eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC----CCeEEEEECCCc--
Q 019326 55 AASGGTD----DTIHLYDL--STSSSL--GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA----DGFVSIFDADPF-- 120 (343)
Q Consensus 55 l~s~~~d----g~i~iwd~--~~~~~~--~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~-- 120 (343)
++.|+.. +.|.+|++ ++++.. ..+.. ......|+++|++ ++|.+... ++.|..|++...
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~--~~~Ps~l~~~~~~-----~~LY~~~e~~~~~g~v~~~~i~~~~g 74 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAE--GENPSWLAVSPDG-----RRLYVVNEGSGDSGGVSSYRIDPDTG 74 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEE--SSSECCEEE-TTS-----SEEEEEETTSSTTTEEEEEEEETTTT
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecC--CCCCceEEEEeCC-----CEEEEEEccccCCCCEEEEEECCCcc
Confidence 4555555 68999988 444432 23222 3567779999998 78887776 579999988653
Q ss_pred c--eeeeeeeccccEEEEEEecCCCEEEEEe-CCCeEEEEEccCC-ceeEE---EE-----------cCCcceEEEEeCC
Q 019326 121 V--LLTSVKVHKKGVNDLAVHHSGKLALTVG-RDDCLAMVNLVRG-RRSFY---HK-----------IGKEASLIKFDGS 182 (343)
Q Consensus 121 ~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~-~d~~i~~wd~~~~-~~~~~---~~-----------~~~~~~~~~~~~~ 182 (343)
+ .+............++++|++++|+++. .+|.+.++++... ..... .. ....+.++.++|+
T Consensus 75 ~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pd 154 (345)
T PF10282_consen 75 TLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPD 154 (345)
T ss_dssp EEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TT
T ss_pred eeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCC
Confidence 2 3333433345667899999999988887 4899999999874 32221 11 1244678999999
Q ss_pred CCEEEEE--eCCcEEEEEcccce--eEE----EecCCcceEEeeecC-CCeEE-EEeCCCcEEEEECC--CCc--eeEEe
Q 019326 183 GEKFFMV--TEEKVGIHQAEDAK--LLC----ELDGKKRILCAAPGE-NGVLF-TGGEDRSITAWDTN--SGK--VAYCI 248 (343)
Q Consensus 183 ~~~~~~~--~~~~i~~~d~~~~~--~~~----~~~~~~~i~~~~~~~-~~~l~-~~~~dg~i~i~d~~--~~~--~~~~~ 248 (343)
++++++. ....|.+|++.... +.. .+........+.|++ +++++ +.-.++.|.+|++. ++. .+..+
T Consensus 155 g~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~ 234 (345)
T PF10282_consen 155 GRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTI 234 (345)
T ss_dssp SSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEe
Confidence 9999888 67889999997654 322 233556688899985 45554 45568889999988 442 22222
Q ss_pred cc---cc--cccEEEEEEEecCCCCCCCCCCeEEEEE-cCCCcEEEEeccCccccCCCccccccc-ccceeEEEcCCCCc
Q 019326 249 ED---AH--SARVKGIVVLTKNDGGSTAENPYLVASA-SSDGVICVWDVRMAIKEKPLPLAEAKT-NSRLTCLAGSSTKS 321 (343)
Q Consensus 249 ~~---~h--~~~v~~~~~~~~~~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~i~~~~~s~~~~ 321 (343)
.. .. ......|+++|+++ +|+.+ -.++.|.+|+++... .....+..... +.....++++++++
T Consensus 235 ~~~~~~~~~~~~~~~i~ispdg~---------~lyvsnr~~~sI~vf~~d~~~-g~l~~~~~~~~~G~~Pr~~~~s~~g~ 304 (345)
T PF10282_consen 235 STLPEGFTGENAPAEIAISPDGR---------FLYVSNRGSNSISVFDLDPAT-GTLTLVQTVPTGGKFPRHFAFSPDGR 304 (345)
T ss_dssp ESCETTSCSSSSEEEEEE-TTSS---------EEEEEECTTTEEEEEEECTTT-TTEEEEEEEEESSSSEEEEEE-TTSS
T ss_pred eeccccccccCCceeEEEecCCC---------EEEEEeccCCEEEEEEEecCC-CceEEEEEEeCCCCCccEEEEeCCCC
Confidence 21 11 12578899998887 65554 467789999994321 01112233333 33488999999999
Q ss_pred eeccccCC
Q 019326 322 FKRPQIGD 329 (343)
Q Consensus 322 ~~~~~~~~ 329 (343)
+++....+
T Consensus 305 ~l~Va~~~ 312 (345)
T PF10282_consen 305 YLYVANQD 312 (345)
T ss_dssp EEEEEETT
T ss_pred EEEEEecC
Confidence 88766543
No 247
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.47 E-value=4.2e-09 Score=83.90 Aligned_cols=268 Identities=16% Similarity=0.180 Sum_probs=176.8
Q ss_pred eeEEeccC----CeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCC---CeEEEEEcCC-
Q 019326 2 SLIAGSYE----KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTD---DTIHLYDLST- 71 (343)
Q Consensus 2 ~l~~g~~d----~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~d---g~i~iwd~~~- 71 (343)
.+.+|+.. ..|++|++.+.. .+...... -.+.+.++-|+|+ .+.|+++-.+ |.|-.|.++.
T Consensus 4 ~~YiGtyT~~~s~gI~v~~ld~~~--------g~l~~~~~-v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~ 74 (346)
T COG2706 4 TVYIGTYTKRESQGIYVFNLDTKT--------GELSLLQL-VAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPD 74 (346)
T ss_pred EEEEeeecccCCCceEEEEEeCcc--------cccchhhh-ccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCC
Confidence 34556654 689999998521 11222222 2467788999999 5678887654 6787777764
Q ss_pred -Ceee--eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-CCeEEEEECCC-cceee--eeeecccc----------EE
Q 019326 72 -SSSL--GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-DGFVSIFDADP-FVLLT--SVKVHKKG----------VN 134 (343)
Q Consensus 72 -~~~~--~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~-~~~~~--~~~~~~~~----------v~ 134 (343)
|++. ...... ..+-..+++++++ ++++++.. .|.|.++-++. +.+.. ....|.+. +.
T Consensus 75 ~G~Lt~ln~~~~~-g~~p~yvsvd~~g-----~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H 148 (346)
T COG2706 75 DGRLTFLNRQTLP-GSPPCYVSVDEDG-----RFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVH 148 (346)
T ss_pred CCeEEEeeccccC-CCCCeEEEECCCC-----CEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccc
Confidence 4432 222222 3344789999998 78888876 57899998854 33221 12235444 78
Q ss_pred EEEEecCCCEEEEEeC-CCeEEEEEccCCceeE----EEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccc-eeEE
Q 019326 135 DLAVHHSGKLALTVGR-DDCLAMVNLVRGRRSF----YHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDA-KLLC 206 (343)
Q Consensus 135 ~i~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~-~~~~ 206 (343)
...+.|++++|++... -..|.+|++..++... ....+.....+.|+|++++..+. -+++|.+|..... ..+.
T Consensus 149 ~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~ 228 (346)
T COG2706 149 SANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFE 228 (346)
T ss_pred eeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEE
Confidence 8899999999988764 3469999999776432 22334567889999999998888 7999999988773 2222
Q ss_pred Eec----------CCcceEEeeec-CCCeEEEEeC-CCcEEEEECCCC-cee---EEecccccccEEEEEEEecCCCCCC
Q 019326 207 ELD----------GKKRILCAAPG-ENGVLFTGGE-DRSITAWDTNSG-KVA---YCIEDAHSARVKGIVVLTKNDGGST 270 (343)
Q Consensus 207 ~~~----------~~~~i~~~~~~-~~~~l~~~~~-dg~i~i~d~~~~-~~~---~~~~~~h~~~v~~~~~~~~~~~~~~ 270 (343)
.++ .......+..+ ++++|+++.. ...|.+|.+... ..+ .... .+....+...+++.++
T Consensus 229 ~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~-teg~~PR~F~i~~~g~---- 303 (346)
T COG2706 229 ELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITP-TEGQFPRDFNINPSGR---- 303 (346)
T ss_pred EeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEec-cCCcCCccceeCCCCC----
Confidence 222 33445566666 5677777654 346888876543 222 2222 4555578888988887
Q ss_pred CCCCeEEEEEcCC-CcEEEEeccCc
Q 019326 271 AENPYLVASASSD-GVICVWDVRMA 294 (343)
Q Consensus 271 ~~~~~~l~s~~~d-g~i~vwd~~~~ 294 (343)
+|+++..| ..|.+|.++..
T Consensus 304 -----~Liaa~q~sd~i~vf~~d~~ 323 (346)
T COG2706 304 -----FLIAANQKSDNITVFERDKE 323 (346)
T ss_pred -----EEEEEccCCCcEEEEEEcCC
Confidence 88888765 57999988653
No 248
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.47 E-value=6.9e-13 Score=108.46 Aligned_cols=253 Identities=15% Similarity=0.086 Sum_probs=178.2
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeee-eccccEEEEEEecC--CCEEEEEeC
Q 019326 74 SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK-VHKKGVNDLAVHHS--GKLALTVGR 150 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~i~~~~~--~~~l~~~~~ 150 (343)
....+..| .+.|..+.|+..+ ..|++|+.|..|.+||...++....+. +|...|..-.|-|. ...+++++.
T Consensus 134 l~~kL~~H-~GcVntV~FN~~G-----d~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~ 207 (559)
T KOG1334|consen 134 LQKKLNKH-KGCVNTVHFNQRG-----DVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSR 207 (559)
T ss_pred hhhcccCC-CCccceeeecccC-----ceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccc
Confidence 34566778 8999999999999 899999999999999998877766664 68888888889885 378999999
Q ss_pred CCeEEEEEccCCce----eEEEEcCCcceEEEEeCCCCE-EEEE-eCCcEEEEEcccceeEEEec----CCc---ceEEe
Q 019326 151 DDCLAMVNLVRGRR----SFYHKIGKEASLIKFDGSGEK-FFMV-TEEKVGIHQAEDAKLLCELD----GKK---RILCA 217 (343)
Q Consensus 151 d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~i~~~d~~~~~~~~~~~----~~~---~i~~~ 217 (343)
||.+++=.+..... .....+.+++..++..|+..+ |.++ .|+.+.-+|++.......+. ... ....+
T Consensus 208 dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~I 287 (559)
T KOG1334|consen 208 DGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTI 287 (559)
T ss_pred cCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeE
Confidence 99999877654332 234456688999999997664 4444 89999999998776544443 222 45566
Q ss_pred eecC--CCeEEEEeCCCcEEEEECCCCce------eEEecc-----cccccEEEEEEEecCCCC----------------
Q 019326 218 APGE--NGVLFTGGEDRSITAWDTNSGKV------AYCIED-----AHSARVKGIVVLTKNDGG---------------- 268 (343)
Q Consensus 218 ~~~~--~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~-----~h~~~v~~~~~~~~~~~~---------------- 268 (343)
+..+ .+.+++|+.|..+++||.+.-.. +..+.. .....|++++++.++...
T Consensus 288 a~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~ 367 (559)
T KOG1334|consen 288 AVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSM 367 (559)
T ss_pred ecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEecccc
Confidence 6653 45899999999999999874221 122210 122346666666332100
Q ss_pred ---------------------------------CCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEE
Q 019326 269 ---------------------------------STAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLA 315 (343)
Q Consensus 269 ---------------------------------~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~ 315 (343)
++.|...++++||.-|.|.||+-.+++.... ...... -|+||.
T Consensus 368 ~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~---MegDr~-VVNCLE 443 (559)
T KOG1334|consen 368 GDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRF---MEGDRH-VVNCLE 443 (559)
T ss_pred ccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHH---hhcccc-eEeccC
Confidence 3346667999999999999999998753322 222222 689999
Q ss_pred cCCCCceeccccCCCCCCCcc
Q 019326 316 GSSTKSFKRPQIGDSAPKGEE 336 (343)
Q Consensus 316 ~s~~~~~~~~~~~~~~~~~~~ 336 (343)
-+|--.+++...-+-.+|.+-
T Consensus 444 pHP~~PvLAsSGid~DVKIWT 464 (559)
T KOG1334|consen 444 PHPHLPVLASSGIDHDVKIWT 464 (559)
T ss_pred CCCCCchhhccCCccceeeec
Confidence 888877777666665555443
No 249
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.46 E-value=1.1e-09 Score=90.35 Aligned_cols=249 Identities=9% Similarity=0.053 Sum_probs=157.9
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEe-e---------CCCeEEEEECCCcceeeeeeeccc
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFST-S---------ADGFVSIFDADPFVLLTSVKVHKK 131 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~-~---------~dg~i~iwd~~~~~~~~~~~~~~~ 131 (343)
++|.+.|..+++.+..+... ..+- .+ ++|++ +.|+.+ + .+..|.+||..+.+.+.++.....
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G-~~P~-~~-~spDg-----~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~ 98 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGG-FLPN-PV-VASDG-----SFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEG 98 (352)
T ss_pred ceEEEEECCCCEEEEEEEcc-CCCc-ee-ECCCC-----CEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCC
Confidence 88999999999999988765 3332 34 99998 455544 4 578999999999999988874222
Q ss_pred -------cEEEEEEecCCCEEEEEe-C-CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEccc-
Q 019326 132 -------GVNDLAVHHSGKLALTVG-R-DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAED- 201 (343)
Q Consensus 132 -------~v~~i~~~~~~~~l~~~~-~-d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~- 201 (343)
....++++|+|++|++.. . +..|.+.|+.+++.+.....+.....+..+. ...++.+.|+......+.+
T Consensus 99 p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e-~~~~~~~~Dg~~~~v~~d~~ 177 (352)
T TIGR02658 99 PRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTAN-DTFFMHCRDGSLAKVGYGTK 177 (352)
T ss_pred chhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecC-CccEEEeecCceEEEEecCC
Confidence 234789999999998776 3 6899999999999998888876544444433 3333444444444432221
Q ss_pred cee-EEE---ecC------CcceEEeeecCCCeEEEEeCCCcEEEEECCCC-----ceeEEeccc------ccccEEEEE
Q 019326 202 AKL-LCE---LDG------KKRILCAAPGENGVLFTGGEDRSITAWDTNSG-----KVAYCIEDA------HSARVKGIV 260 (343)
Q Consensus 202 ~~~-~~~---~~~------~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~~~~------h~~~v~~~~ 260 (343)
++. ... +.. ..+ .....++.+++.... |.|.+.|+... +....+..+ ....+.-++
T Consensus 178 g~~~~~~~~vf~~~~~~v~~rP--~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia 254 (352)
T TIGR02658 178 GNPKIKPTEVFHPEDEYLINHP--AYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVA 254 (352)
T ss_pred CceEEeeeeeecCCccccccCC--ceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEE
Confidence 111 111 111 112 111214667766666 99999996433 333322211 223344488
Q ss_pred EEecCCCCCCCCCCeEEEEEc----------CCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCc-eecccc-C
Q 019326 261 VLTKNDGGSTAENPYLVASAS----------SDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKS-FKRPQI-G 328 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~~~~~~-~ 328 (343)
+++++. .++... ..+.|.++|..+.+ .+..+..+..+..+++++|++ ++.... .
T Consensus 255 ~~~dg~---------~lyV~~~~~~~~thk~~~~~V~ViD~~t~k-----vi~~i~vG~~~~~iavS~Dgkp~lyvtn~~ 320 (352)
T TIGR02658 255 YHRARD---------RIYLLADQRAKWTHKTASRFLFVVDAKTGK-----RLRKIELGHEIDSINVSQDAKPLLYALSTG 320 (352)
T ss_pred EcCCCC---------EEEEEecCCccccccCCCCEEEEEECCCCe-----EEEEEeCCCceeeEEECCCCCeEEEEeCCC
Confidence 888876 555532 12579999998875 334455566899999999999 655444 3
Q ss_pred CCCCCCcc
Q 019326 329 DSAPKGEE 336 (343)
Q Consensus 329 ~~~~~~~~ 336 (343)
.+.+...+
T Consensus 321 s~~VsViD 328 (352)
T TIGR02658 321 DKTLYIFD 328 (352)
T ss_pred CCcEEEEE
Confidence 44344333
No 250
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.46 E-value=1.9e-11 Score=95.99 Aligned_cols=238 Identities=14% Similarity=0.179 Sum_probs=163.2
Q ss_pred CCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe-----eeeEeccCC-----------CCCeEEEEEeCCCCCCCCceE
Q 019326 42 LSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS-----SLGAIHHHE-----------SSSVTSLAFYTPQNLSVPRNL 103 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~-----------~~~v~~l~~~~~~~~~~~~~l 103 (343)
..-|.++.|+ |++||||..+|.|.++.-.... ....++.|+ ...|..+.|.++++. ..+
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~---a~F 101 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNL---AEF 101 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCc---cEE
Confidence 4568899998 9999999999999999654322 233444442 246889999988743 677
Q ss_pred EEeeCCCeEEEEECCCcce-----------------------------------eeee-eeccccEEEEEEecCCCEEEE
Q 019326 104 FSTSADGFVSIFDADPFVL-----------------------------------LTSV-KVHKKGVNDLAVHHSGKLALT 147 (343)
Q Consensus 104 ~s~~~dg~i~iwd~~~~~~-----------------------------------~~~~-~~~~~~v~~i~~~~~~~~l~~ 147 (343)
+..+.|.+|++|.+..... .+.+ ..|.--|++|.++.|+..+++
T Consensus 102 LlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lS 181 (433)
T KOG1354|consen 102 LLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLS 181 (433)
T ss_pred EEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEee
Confidence 8888999999998742110 0111 146778999999999888877
Q ss_pred EeCCCeEEEEEccCCceeEEE-Ec--------CCcceEEEEeCCC-CEEEEE-eCCcEEEEEcccceeEEEe----c---
Q 019326 148 VGRDDCLAMVNLVRGRRSFYH-KI--------GKEASLIKFDGSG-EKFFMV-TEEKVGIHQAEDAKLLCEL----D--- 209 (343)
Q Consensus 148 ~~~d~~i~~wd~~~~~~~~~~-~~--------~~~~~~~~~~~~~-~~~~~~-~~~~i~~~d~~~~~~~~~~----~--- 209 (343)
+ .|=.|.+|+++-....+.. .. ..-|++..|+|.. +.++-. +.|.|++.|++...+.-.. .
T Consensus 182 A-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepe 260 (433)
T KOG1354|consen 182 A-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPE 260 (433)
T ss_pred c-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhcccc
Confidence 5 4678999998754432222 11 2346778899854 444444 8999999999854322111 1
Q ss_pred C----------CcceEEeeecC-CCeEEEEeCCCcEEEEEC-CCCceeEEecccccc------------cE---EEEEEE
Q 019326 210 G----------KKRILCAAPGE-NGVLFTGGEDRSITAWDT-NSGKVAYCIEDAHSA------------RV---KGIVVL 262 (343)
Q Consensus 210 ~----------~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~-~~~~~~~~~~~~h~~------------~v---~~~~~~ 262 (343)
. -..|..+.|++ |+++++-+ --+|++||+ ...+++.+++ -|.. .| ..++|+
T Consensus 261 dp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~-vh~~lr~kLc~lYEnD~IfdKFec~~s 338 (433)
T KOG1354|consen 261 DPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYP-VHEYLRSKLCSLYENDAIFDKFECSWS 338 (433)
T ss_pred CCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcceEEe-ehHhHHHHHHHHhhccchhheeEEEEc
Confidence 1 13477888885 56776643 368999999 4566777766 5532 12 345666
Q ss_pred ecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 263 TKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 263 ~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.++. +++||+....++++++..+
T Consensus 339 g~~~---------~v~TGsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 339 GNDS---------YVMTGSYNNVFRVFNLARG 361 (433)
T ss_pred CCcc---------eEecccccceEEEecCCCC
Confidence 6655 9999999999999997665
No 251
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.46 E-value=2.3e-09 Score=88.42 Aligned_cols=259 Identities=14% Similarity=0.095 Sum_probs=158.3
Q ss_pred CeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeC----------CCeEEEEEcCCCeeeeEec
Q 019326 10 KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGT----------DDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 10 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~ 79 (343)
+.|.+.|..+ .+.+..+..-..+-.-++-+++.|+++.. +..|.+||..+.+.+.++.
T Consensus 27 ~~v~ViD~~~------------~~v~g~i~~G~~P~~~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~ 94 (352)
T TIGR02658 27 TQVYTIDGEA------------GRVLGMTDGGFLPNPVVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIE 94 (352)
T ss_pred ceEEEEECCC------------CEEEEEEEccCCCceeECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEc
Confidence 7889999876 22222222211221113333666666554 7899999999999998887
Q ss_pred cCCC------CCeEEEEEeCCCCCCCCceEEEee-C-CCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC
Q 019326 80 HHES------SSVTSLAFYTPQNLSVPRNLFSTS-A-DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD 151 (343)
Q Consensus 80 ~~~~------~~v~~l~~~~~~~~~~~~~l~s~~-~-dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d 151 (343)
.... .....++++|++ ++|+... . +..|.+.|+.+++.+.++.... ...-...+++..+ +-+.|
T Consensus 95 ~p~~p~~~~~~~~~~~~ls~dg-----k~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~-~~~vy~t~e~~~~--~~~~D 166 (352)
T TIGR02658 95 LPEGPRFLVGTYPWMTSLTPDN-----KTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD-CYHIFPTANDTFF--MHCRD 166 (352)
T ss_pred cCCCchhhccCccceEEECCCC-----CEEEEecCCCCCEEEEEECCCCcEEEEEeCCC-CcEEEEecCCccE--EEeec
Confidence 5311 223478999999 7777665 3 6899999999999988887522 2222222222222 22345
Q ss_pred CeEEEEEccCCceeEEE--Ec--C--Ccc-eEEEEeC-CCCEEEEEeCCcEEEEEccc-----ceeEEEec--------C
Q 019326 152 DCLAMVNLVRGRRSFYH--KI--G--KEA-SLIKFDG-SGEKFFMVTEEKVGIHQAED-----AKLLCELD--------G 210 (343)
Q Consensus 152 ~~i~~wd~~~~~~~~~~--~~--~--~~~-~~~~~~~-~~~~~~~~~~~~i~~~d~~~-----~~~~~~~~--------~ 210 (343)
|......+.+....... .. . ..+ ..-.+.+ ++.++++...|.+.+.|+.. .+.+..+. .
T Consensus 167 g~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wr 246 (352)
T TIGR02658 167 GSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWR 246 (352)
T ss_pred CceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecCCeEEEEecCCCcceecceeeeccccccccccC
Confidence 55444433322111111 11 1 000 0003455 88999888669999999543 33333322 1
Q ss_pred CcceEEeeec-CCCeEEEEe----------CCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEE-
Q 019326 211 KKRILCAAPG-ENGVLFTGG----------EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVA- 278 (343)
Q Consensus 211 ~~~i~~~~~~-~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~- 278 (343)
+..+.-++++ +++.++... ..+.|.++|..+++.+..+. -...+..+++++++.. +|+
T Consensus 247 P~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~--vG~~~~~iavS~Dgkp--------~lyv 316 (352)
T TIGR02658 247 PGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIE--LGHEIDSINVSQDAKP--------LLYA 316 (352)
T ss_pred CCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEe--CCCceeeEEECCCCCe--------EEEE
Confidence 2333447777 556666532 22579999999999999998 4568999999998752 444
Q ss_pred EEcCCCcEEEEeccCccccC
Q 019326 279 SASSDGVICVWDVRMAIKEK 298 (343)
Q Consensus 279 s~~~dg~i~vwd~~~~~~~~ 298 (343)
+...++.|.+.|+.+++...
T Consensus 317 tn~~s~~VsViD~~t~k~i~ 336 (352)
T TIGR02658 317 LSTGDKTLYIFDAETGKELS 336 (352)
T ss_pred eCCCCCcEEEEECcCCeEEe
Confidence 44468899999999875433
No 252
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.45 E-value=1.3e-10 Score=101.26 Aligned_cols=215 Identities=16% Similarity=0.128 Sum_probs=135.9
Q ss_pred ecCCCCCeEEEEec--CceEEEeeCC---CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEE-EeeCCC-
Q 019326 38 YPAHLSPITTVAVS--GTAAASGGTD---DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLF-STSADG- 110 (343)
Q Consensus 38 ~~~h~~~v~~l~~~--~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~-s~~~dg- 110 (343)
+..+...+...+|+ |+.|+..+.+ ..|.+||+.+++... +... .+.+....|+|++ +.|+ +...+|
T Consensus 194 l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~-~g~~~~~~~SpDG-----~~la~~~~~~g~ 266 (430)
T PRK00178 194 LLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNF-EGLNGAPAWSPDG-----SKLAFVLSKDGN 266 (430)
T ss_pred EecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCC-CCCcCCeEECCCC-----CEEEEEEccCCC
Confidence 33567788999998 7777765543 368999998886543 3223 3455678999999 5555 555555
Q ss_pred -eEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC-C--CeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEE
Q 019326 111 -FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-D--DCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKF 186 (343)
Q Consensus 111 -~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-d--~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (343)
.|++||+.+++.. .+..+........|+|+++.++..+. + ..|+++|+.+++...............|+|+++.+
T Consensus 267 ~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~i 345 (430)
T PRK00178 267 PEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADGKTL 345 (430)
T ss_pred ceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCCCEE
Confidence 6888899886543 34445555667889999988776654 3 35788888777644333222334457899999999
Q ss_pred EEE-e-CC--cEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeC-C--CcEEEEECCCCceeEEecccccccEEE
Q 019326 187 FMV-T-EE--KVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGE-D--RSITAWDTNSGKVAYCIEDAHSARVKG 258 (343)
Q Consensus 187 ~~~-~-~~--~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~-d--g~i~i~d~~~~~~~~~~~~~h~~~v~~ 258 (343)
+.. . ++ .|.++|+.+++. +.+..........|+ +++.++..+. + ..|.+++.. +.....+. .+.+.+..
T Consensus 346 ~~~~~~~~~~~l~~~dl~tg~~-~~lt~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~~~l~-~~~g~~~~ 422 (430)
T PRK00178 346 VMVHRQDGNFHVAAQDLQRGSV-RILTDTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN-GRVRLPLP-TAQGEVRE 422 (430)
T ss_pred EEEEccCCceEEEEEECCCCCE-EEccCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECc-CCCCCcCC
Confidence 887 2 33 477889887754 333322222234566 4555554443 3 346677775 44444555 44455666
Q ss_pred EEEEe
Q 019326 259 IVVLT 263 (343)
Q Consensus 259 ~~~~~ 263 (343)
.+|+|
T Consensus 423 p~ws~ 427 (430)
T PRK00178 423 PSWSP 427 (430)
T ss_pred CccCC
Confidence 66665
No 253
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=2.1e-10 Score=100.04 Aligned_cols=211 Identities=10% Similarity=0.040 Sum_probs=131.2
Q ss_pred eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC---CeEEEEECCCcceeeeeeeccccEEEEEEe
Q 019326 63 TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD---GFVSIFDADPFVLLTSVKVHKKGVNDLAVH 139 (343)
Q Consensus 63 ~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~ 139 (343)
.|.++|.+.+.. ..+..+ ...+....|+|++ +.|+..+.+ ..|.+||+.+++... +....+.+....|+
T Consensus 180 ~l~~~d~~g~~~-~~l~~~-~~~~~~p~wSpDG-----~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~S 251 (430)
T PRK00178 180 TLQRSDYDGARA-VTLLQS-REPILSPRWSPDG-----KRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWS 251 (430)
T ss_pred EEEEECCCCCCc-eEEecC-CCceeeeeECCCC-----CEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEEC
Confidence 477788875543 445445 5788999999999 677665543 369999998876433 33233445578999
Q ss_pred cCCCEEEE-EeCCC--eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eC--CcEEEEEcccceeEEEecCCc
Q 019326 140 HSGKLALT-VGRDD--CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TE--EKVGIHQAEDAKLLCELDGKK 212 (343)
Q Consensus 140 ~~~~~l~~-~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~i~~~d~~~~~~~~~~~~~~ 212 (343)
|+|+.|+. ...+| .|+++|+.+++...............|+|+++.++.. .+ ..|.++++.+++..+......
T Consensus 252 pDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~ 331 (430)
T PRK00178 252 PDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGN 331 (430)
T ss_pred CCCCEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCC
Confidence 99988764 44444 6888899887754443334445568899999988766 23 357777877766433222222
Q ss_pred ceEEeeec-CCCeEEEEeC-CC--cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC-C--c
Q 019326 213 RILCAAPG-ENGVLFTGGE-DR--SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD-G--V 285 (343)
Q Consensus 213 ~i~~~~~~-~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d-g--~ 285 (343)
......|+ +++.++..+. ++ .|.++|+.+++. ..+. +........|+|++. +++..+.+ | .
T Consensus 332 ~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~-~~lt--~~~~~~~p~~spdg~---------~i~~~~~~~g~~~ 399 (430)
T PRK00178 332 YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV-RILT--DTSLDESPSVAPNGT---------MLIYATRQQGRGV 399 (430)
T ss_pred CccceEECCCCCEEEEEEccCCceEEEEEECCCCCE-EEcc--CCCCCCCceECCCCC---------EEEEEEecCCceE
Confidence 23345566 4566655543 33 588899987764 3333 111222446777765 66655543 3 4
Q ss_pred EEEEeccC
Q 019326 286 ICVWDVRM 293 (343)
Q Consensus 286 i~vwd~~~ 293 (343)
|.++++..
T Consensus 400 l~~~~~~g 407 (430)
T PRK00178 400 LMLVSING 407 (430)
T ss_pred EEEEECCC
Confidence 56666643
No 254
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.44 E-value=2.6e-11 Score=95.27 Aligned_cols=228 Identities=12% Similarity=0.142 Sum_probs=156.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC------------CCeEEEEec----CceEEEeeCCCeEE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL------------SPITTVAVS----GTAAASGGTDDTIH 65 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~v~~l~~~----~~~l~s~~~dg~i~ 65 (343)
.|++|..+|.|.+|.-... ...++.-...++.|. ..|+.+.|. ...++..+.|.+|+
T Consensus 39 ~LatGdkgGRVv~f~r~~~-------~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNdktiK 111 (433)
T KOG1354|consen 39 RLATGDKGGRVVLFEREKL-------YKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTNDKTIK 111 (433)
T ss_pred eEeecCCCCeEEEeecccc-------cccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCCccee
Confidence 5899999999999976541 111333344444443 457888887 45677788899999
Q ss_pred EEEcCCCe-----------------------------------eeeEe-ccCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 66 LYDLSTSS-----------------------------------SLGAI-HHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 66 iwd~~~~~-----------------------------------~~~~~-~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
+|.+.... +.+.+ ..| ...|+++.++.+. +.++++ .|
T Consensus 112 lWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaH-tyhiNSIS~NsD~-----Et~lSA-Dd 184 (433)
T KOG1354|consen 112 LWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAH-TYHINSISVNSDK-----ETFLSA-DD 184 (433)
T ss_pred eeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccc-eeEeeeeeecCcc-----ceEeec-cc
Confidence 99875321 11122 235 7789999999988 566664 56
Q ss_pred CeEEEEECCCcc---eeeeeeec-----cccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCce------eEEEE-----
Q 019326 110 GFVSIFDADPFV---LLTSVKVH-----KKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRR------SFYHK----- 169 (343)
Q Consensus 110 g~i~iwd~~~~~---~~~~~~~~-----~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~------~~~~~----- 169 (343)
-.|.+|+++--. .+-.++.+ ..-|++..|+|.. +.++-.+..|+|++.|++.... +....
T Consensus 185 LRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~ 264 (433)
T KOG1354|consen 185 LRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSS 264 (433)
T ss_pred eeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcc
Confidence 789999985322 12222333 2468888999964 6778888899999999985421 11111
Q ss_pred ------cCCcceEEEEeCCCCEEEEEeCCcEEEEEc-ccceeEEEec-CC------------cc---eEEeeec-CCCeE
Q 019326 170 ------IGKEASLIKFDGSGEKFFMVTEEKVGIHQA-EDAKLLCELD-GK------------KR---ILCAAPG-ENGVL 225 (343)
Q Consensus 170 ------~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~-~~~~~~~~~~-~~------------~~---i~~~~~~-~~~~l 225 (343)
.-..|+.+.|+++|+++++-.--++++||+ ...+++.+++ |. .. -..++|+ ++.++
T Consensus 265 rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v 344 (433)
T KOG1354|consen 265 RSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYV 344 (433)
T ss_pred hhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceE
Confidence 113567799999999999988899999999 4566666665 21 11 2345565 55699
Q ss_pred EEEeCCCcEEEEECCCCc
Q 019326 226 FTGGEDRSITAWDTNSGK 243 (343)
Q Consensus 226 ~~~~~dg~i~i~d~~~~~ 243 (343)
++|+.....++|+...|.
T Consensus 345 ~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 345 MTGSYNNVFRVFNLARGS 362 (433)
T ss_pred ecccccceEEEecCCCCc
Confidence 999999999999976554
No 255
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.44 E-value=2.2e-10 Score=98.60 Aligned_cols=253 Identities=13% Similarity=0.139 Sum_probs=160.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEE-EEecCceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITT-VAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
++++++.+|.++.+|.++ ++..-.. +.. +.+.+ ....+..++.+..+|.+..+|.++|+.+..+..
T Consensus 122 ~v~v~~~~g~l~ald~~t-------G~~~W~~-----~~~-~~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~ 188 (394)
T PRK11138 122 KVYIGSEKGQVYALNAED-------GEVAWQT-----KVA-GEALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNL 188 (394)
T ss_pred EEEEEcCCCEEEEEECCC-------CCCcccc-----cCC-CceecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecC
Confidence 467788899999999877 3221111 111 11211 122367788888899999999999999988764
Q ss_pred CCCCCe-----EEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccc-------cEEEEEEec--CCCEEE
Q 019326 81 HESSSV-----TSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKK-------GVNDLAVHH--SGKLAL 146 (343)
Q Consensus 81 ~~~~~v-----~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------~v~~i~~~~--~~~~l~ 146 (343)
. ...+ .+-... + ..++.++.+|.+..+|..+++.+........ ....+..+| .+..++
T Consensus 189 ~-~~~~~~~~~~sP~v~-~------~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy 260 (394)
T PRK11138 189 D-VPSLTLRGESAPATA-F------GGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVY 260 (394)
T ss_pred C-CCcccccCCCCCEEE-C------CEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEE
Confidence 3 1111 011111 2 3577788899999999999887766542110 011111122 245677
Q ss_pred EEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecC--CcceEEeeecCCC
Q 019326 147 TVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG--KKRILCAAPGENG 223 (343)
Q Consensus 147 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~--~~~i~~~~~~~~~ 223 (343)
.++.+|.+..+|..+++.+......... .+. ..+..++++ .++.+..+|..+++.+..... .....+... .++
T Consensus 261 ~~~~~g~l~ald~~tG~~~W~~~~~~~~-~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v-~~g 336 (394)
T PRK11138 261 ALAYNGNLVALDLRSGQIVWKREYGSVN-DFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL-YNG 336 (394)
T ss_pred EEEcCCeEEEEECCCCCEEEeecCCCcc-CcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE-ECC
Confidence 7888999999999999887665543321 111 234455555 899999999999987765431 111222222 366
Q ss_pred eEEEEeCCCcEEEEECCCCceeEEecccccccEEE-EEEEecCCCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 224 VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKG-IVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 224 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
+++.++.+|.|+++|..+|+.+.+.. -....+.+ ..+ .++ .|+.++.||.|..+++
T Consensus 337 ~l~v~~~~G~l~~ld~~tG~~~~~~~-~~~~~~~s~P~~-~~~----------~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 337 YLVVGDSEGYLHWINREDGRFVAQQK-VDSSGFLSEPVV-ADD----------KLLIQARDGTVYAITR 393 (394)
T ss_pred EEEEEeCCCEEEEEECCCCCEEEEEE-cCCCcceeCCEE-ECC----------EEEEEeCCceEEEEeC
Confidence 78889999999999999999988876 33232322 222 222 7888899999988765
No 256
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.44 E-value=4.2e-11 Score=94.13 Aligned_cols=220 Identities=15% Similarity=0.173 Sum_probs=147.4
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcC----CCeeee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLS----TSSSLG 76 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~----~~~~~~ 76 (343)
+++.+.|.+++||--.... ++.+-.. ..-..+++++.+. ...|+.|-..|++.-+.+. .....+
T Consensus 39 v~~~s~drtvrv~lkrds~---------q~wpsI~-~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r 108 (404)
T KOG1409|consen 39 VISVSEDRTVRVWLKRDSG---------QYWPSIY-HYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLK 108 (404)
T ss_pred eEEccccceeeeEEecccc---------ccCchhh-hhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhh
Confidence 5778899999999755421 1111111 1235678889988 6788899999999888654 344556
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEE
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAM 156 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~ 156 (343)
....| ...+..+-|+... +.+++.+.|..+.---.+.+..+..+... ....++.+.-. +...|...|.|.+
T Consensus 109 ~~~~h-~~~v~~~if~~~~-----e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~-~~~t~~~~d~~--~~fvGd~~gqvt~ 179 (404)
T KOG1409|consen 109 DYLAH-QARVSAIVFSLTH-----EWVLSTGKDKQFAWHCTESGNRLGGYNFE-TPASALQFDAL--YAFVGDHSGQITM 179 (404)
T ss_pred hhhhh-hcceeeEEecCCc-----eeEEEeccccceEEEeeccCCcccceEee-ccCCCCceeeE--EEEecccccceEE
Confidence 66778 8999999999877 79999999987653333444433332211 11111111111 4555666676666
Q ss_pred EEccCCceeE---EEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEE--EecCCcceEEeeec-CCCeEEEEe
Q 019326 157 VNLVRGRRSF---YHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLC--ELDGKKRILCAAPG-ENGVLFTGG 229 (343)
Q Consensus 157 wd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~--~~~~~~~i~~~~~~-~~~~l~~~~ 229 (343)
-.+....... ...+...+.+++|.+....++++ .|..+.+||+...+-.. ...|...+..+... --..+++++
T Consensus 180 lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~ 259 (404)
T KOG1409|consen 180 LKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCG 259 (404)
T ss_pred EEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeecc
Confidence 6555443322 23345778999999999999999 99999999997654333 33377777777665 346899999
Q ss_pred CCCcEEEEECCC
Q 019326 230 EDRSITAWDTNS 241 (343)
Q Consensus 230 ~dg~i~i~d~~~ 241 (343)
.||.|.+|+++.
T Consensus 260 edg~i~~w~mn~ 271 (404)
T KOG1409|consen 260 EDGGIVVWNMNV 271 (404)
T ss_pred CCCeEEEEeccc
Confidence 999999999864
No 257
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.44 E-value=2.7e-10 Score=98.04 Aligned_cols=266 Identities=10% Similarity=0.088 Sum_probs=164.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEE---ec-CC-CCCe-EEEEecCceEEEeeCCCeEEEEEcCCCeee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFS---YP-AH-LSPI-TTVAVSGTAAASGGTDDTIHLYDLSTSSSL 75 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~---~~-~h-~~~v-~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~ 75 (343)
++++++.+|.|..+|..+ ++..-...... +. .. ...+ ..+...++.++.++.+|.+..+|.++|+.+
T Consensus 71 ~vy~~~~~g~l~ald~~t-------G~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~ 143 (394)
T PRK11138 71 KVYAADRAGLVKALDADT-------GKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVA 143 (394)
T ss_pred EEEEECCCCeEEEEECCC-------CcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCc
Confidence 467778888898898876 32221111110 00 00 0011 123445778888889999999999999999
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEE-EEEec--CCCEEEEEeCCC
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVND-LAVHH--SGKLALTVGRDD 152 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~-i~~~~--~~~~l~~~~~d~ 152 (343)
...... ..+.+--...+ ..++.++.++.+..+|.++++.+..+......... ..-+| .+..++.++.+|
T Consensus 144 W~~~~~--~~~~ssP~v~~------~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g 215 (394)
T PRK11138 144 WQTKVA--GEALSRPVVSD------GLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNG 215 (394)
T ss_pred ccccCC--CceecCCEEEC------CEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCC
Confidence 887655 23322111113 36777888999999999999988887642111000 00111 123577778899
Q ss_pred eEEEEEccCCceeEEEEcCCcc--------eEEEEeC--CCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecC
Q 019326 153 CLAMVNLVRGRRSFYHKIGKEA--------SLIKFDG--SGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE 221 (343)
Q Consensus 153 ~i~~wd~~~~~~~~~~~~~~~~--------~~~~~~~--~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~ 221 (343)
.+..+|..+++.........+. ..+..+| .+..++++ .++.+..+|..+++.+.+...... ..+.. .
T Consensus 216 ~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~-~~~~~-~ 293 (394)
T PRK11138 216 RVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGSV-NDFAV-D 293 (394)
T ss_pred EEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCCc-cCcEE-E
Confidence 9999999999876654432110 0011112 23444444 889999999999988876653221 12222 4
Q ss_pred CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 222 NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 222 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
++.++.++.+|.+..+|..+++.+............+..+. + . .|+.++.||.|.+.|..+++
T Consensus 294 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~-~-g---------~l~v~~~~G~l~~ld~~tG~ 356 (394)
T PRK11138 294 GGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLY-N-G---------YLVVGDSEGYLHWINREDGR 356 (394)
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEEE-C-C---------EEEEEeCCCEEEEEECCCCC
Confidence 66788888999999999999988765541111112222222 2 2 78889999999999999875
No 258
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.43 E-value=3.8e-10 Score=94.35 Aligned_cols=291 Identities=13% Similarity=0.140 Sum_probs=192.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEe-----eC-----CCeEEEEEc
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASG-----GT-----DDTIHLYDL 69 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~-----~~-----dg~i~iwd~ 69 (343)
++.+-+.+..++|++... .. .+.+.. ...+.++.|+ +++|.+= .. .-.+++|++
T Consensus 47 ~lfA~~~~~~v~i~~~~~-------~~-----~~lt~~--~~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~v 112 (566)
T KOG2315|consen 47 RLFAYSDNQVVKVFEIAT-------LK-----VVLCVE--LKKTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNV 112 (566)
T ss_pred cEEEEEcCCeEEEEEccC-------Cc-----EEEEec--cceeeeeeecccccccccccccccccCCCCCCCceeeeee
Confidence 355566677788887765 11 222222 1268888888 7776652 11 234789999
Q ss_pred CCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCC--CEEEE
Q 019326 70 STSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG--KLALT 147 (343)
Q Consensus 70 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~--~~l~~ 147 (343)
+++.....++.. ...-++..|+.+. .+++=-..+.+++|+....+.+ .-+.|...|..+.++|.. ..+++
T Consensus 113 et~~~~s~~q~k-~Q~~W~~qfs~dE------sl~arlv~nev~f~~~~~f~~~-~~kl~~~~i~~f~lSpgp~~~~vAv 184 (566)
T KOG2315|consen 113 ETGVQRSQIQKK-MQNGWVPQFSIDE------SLAARLVSNEVQFYDLGSFKTI-QHKLSVSGITMLSLSPGPEPPFVAV 184 (566)
T ss_pred ccceehhheehh-hhcCcccccccch------hhhhhhhcceEEEEecCCccce-eeeeeccceeeEEecCCCCCceEEE
Confidence 997666666554 2222789999887 4555555678999999774432 223467889999999974 23332
Q ss_pred -----EeCCCeEEEEEccCCceeEEE----EcCCcceEEEEeCCCCEEEEE----e---------CCcEEEEEcccceeE
Q 019326 148 -----VGRDDCLAMVNLVRGRRSFYH----KIGKEASLIKFDGSGEKFFMV----T---------EEKVGIHQAEDAKLL 205 (343)
Q Consensus 148 -----~~~d~~i~~wd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~---------~~~i~~~d~~~~~~~ 205 (343)
.+.-+.+++|.+......... -....-..+.|++-+.-+++. - +..+.++++......
T Consensus 185 yvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~ 264 (566)
T KOG2315|consen 185 YVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVS 264 (566)
T ss_pred EccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEE
Confidence 234567899887632221111 112334457788777654433 1 235778888766777
Q ss_pred EEecCCcceEEeeecCC-C--eEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcC
Q 019326 206 CELDGKKRILCAAPGEN-G--VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASS 282 (343)
Q Consensus 206 ~~~~~~~~i~~~~~~~~-~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 282 (343)
-.+...++|.++.|++. . -++-|-.--.+.|||++ +.++..+. .++=+++-|+|.+. +|+.+|.
T Consensus 265 V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~---egpRN~~~fnp~g~---------ii~lAGF 331 (566)
T KOG2315|consen 265 VPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP---EGPRNTAFFNPHGN---------IILLAGF 331 (566)
T ss_pred EecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC---CCCccceEECCCCC---------EEEEeec
Confidence 77778999999999954 3 34456678899999998 77887776 55667889999987 8887775
Q ss_pred C---CcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCC
Q 019326 283 D---GVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPK 333 (343)
Q Consensus 283 d---g~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~ 333 (343)
+ |.|-|||+.+.+ .+..+.... -+-.+|+|||.+++......+++
T Consensus 332 GNL~G~mEvwDv~n~K-----~i~~~~a~~-tt~~eW~PdGe~flTATTaPRlr 379 (566)
T KOG2315|consen 332 GNLPGDMEVWDVPNRK-----LIAKFKAAN-TTVFEWSPDGEYFLTATTAPRLR 379 (566)
T ss_pred CCCCCceEEEeccchh-----hccccccCC-ceEEEEcCCCcEEEEEeccccEE
Confidence 4 889999999854 233333222 45688999999998887775544
No 259
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.43 E-value=1.8e-12 Score=108.04 Aligned_cols=283 Identities=14% Similarity=0.175 Sum_probs=188.5
Q ss_pred eeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCC-------CeeeeEeccCCCCCeEEEEEeCCCCCCCC
Q 019326 30 LTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLST-------SSSLGAIHHHESSSVTSLAFYTPQNLSVP 100 (343)
Q Consensus 30 ~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~v~~l~~~~~~~~~~~ 100 (343)
+....+..+.||+..|..++-- .+.+++++.|.+|++|.++. ..+..+++.| ..+|.++.|..+.
T Consensus 723 ~~~irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aH-kk~i~~igfL~~l----- 796 (1034)
T KOG4190|consen 723 FDHIRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAH-KKPIHDIGFLADL----- 796 (1034)
T ss_pred cceeeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhc-cCcccceeeeecc-----
Confidence 3445667888999999988654 78899999999999999863 2466778889 9999999999876
Q ss_pred ceEEEeeCCCeEEEEECCCcceeeeeee--ccccEEEEEEecC--CCEEEE-EeCCCeEEEEEccCCceeEEEEcC----
Q 019326 101 RNLFSTSADGFVSIFDADPFVLLTSVKV--HKKGVNDLAVHHS--GKLALT-VGRDDCLAMVNLVRGRRSFYHKIG---- 171 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~i~~~~~--~~~l~~-~~~d~~i~~wd~~~~~~~~~~~~~---- 171 (343)
++++ +.||-|.+||.--++++..... ..+.+..+...++ ...++. ++...+|+++|.+..+.....+..
T Consensus 797 r~i~--ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~ 874 (1034)
T KOG4190|consen 797 RSIA--SCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPG 874 (1034)
T ss_pred ceee--eccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCC
Confidence 5555 4588999999876666654321 1223333444443 333333 467899999999988766554432
Q ss_pred --CcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEE-EECCCCceeE
Q 019326 172 --KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITA-WDTNSGKVAY 246 (343)
Q Consensus 172 --~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i-~d~~~~~~~~ 246 (343)
..+.+++..+.|+.++++ ++|.+.+.|.++|+.+.... .......++...+..++....|.++.+ |..-.+....
T Consensus 875 Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldgimh~ 954 (1034)
T KOG4190|consen 875 PNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDGIMHL 954 (1034)
T ss_pred CchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCCeeee
Confidence 447789999999999999 99999999999999887765 334444444434567777777888888 8776665554
Q ss_pred EecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc-cccC-CCcccccccccceeEEEcCCCCceec
Q 019326 247 CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA-IKEK-PLPLAEAKTNSRLTCLAGSSTKSFKR 324 (343)
Q Consensus 247 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~-~~~~~~~~~~~~i~~~~~s~~~~~~~ 324 (343)
+.. ....+-.-+ -.-++ -|+++.....+.+|.-... .... ..++..-...+..++++.-|-+.-..
T Consensus 955 q~k-pppepahfl--qsvgp---------SLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afL 1022 (1034)
T KOG4190|consen 955 QDK-PPPEPAHFL--QSVGP---------SLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFL 1022 (1034)
T ss_pred ccC-CCCcchhhh--hccCc---------eeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhh
Confidence 444 222222111 11122 5777776677777743221 1111 11222233445677888877776666
Q ss_pred cccCCCCC
Q 019326 325 PQIGDSAP 332 (343)
Q Consensus 325 ~~~~~~~~ 332 (343)
.|.+.+.+
T Consensus 1023 aGne~G~I 1030 (1034)
T KOG4190|consen 1023 AGNEHGAI 1030 (1034)
T ss_pred ccCCCCce
Confidence 66666544
No 260
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.42 E-value=3.1e-12 Score=106.72 Aligned_cols=269 Identities=17% Similarity=0.198 Sum_probs=174.2
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEec-c
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIH-H 80 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~ 80 (343)
.+++++.|++|++|.++++.. ...+..+.+++..|+.+|..+.|-...-..++.||-|.+||.--++.+.... .
T Consensus 749 SFiSASkDKTVKLWSik~EgD-----~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr~Laq~~da 823 (1034)
T KOG4190|consen 749 SFISASKDKTVKLWSIKPEGD-----EIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGRLLAQMEDA 823 (1034)
T ss_pred ceeeccCCceEEEEEeccccC-----ccccceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccchhHhhhcC
Confidence 368899999999999987432 2234457889999999999999983333334567889999998887766432 1
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEe-eCCCeEEEEECCCcceeeeeee-----ccccEEEEEEecCCCEEEEEeCCCeE
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFST-SADGFVSIFDADPFVLLTSVKV-----HKKGVNDLAVHHSGKLALTVGRDDCL 154 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~i~~~~~~~~l~~~~~d~~i 154 (343)
...+.+..+...++-+ ...+++| +...+|+++|.+..+....++. .+..+.+++..+.|+.++.+-.+|.|
T Consensus 824 pk~~a~~~ikcl~nv~---~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci 900 (1034)
T KOG4190|consen 824 PKEGAGGNIKCLENVD---RHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCI 900 (1034)
T ss_pred cccCCCceeEecccCc---chheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcE
Confidence 1134444444444421 0244444 7789999999998877666653 34578999999999999999999999
Q ss_pred EEEEccCCceeEEEEcC-CcceEEEEeCCCCEEEEE-eCCcEEE-EEcccceeEEEecCCcceEEeeecCCCeEEEEeCC
Q 019326 155 AMVNLVRGRRSFYHKIG-KEASLIKFDGSGEKFFMV-TEEKVGI-HQAEDAKLLCELDGKKRILCAAPGENGVLFTGGED 231 (343)
Q Consensus 155 ~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~i~~-~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d 231 (343)
.+.|.++|+.+.....- -....++ .|..+.++.. .+..+.+ |....+....+.+.+......--+-+.-+++....
T Consensus 901 ~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldgimh~q~kpppepahflqsvgpSLV~a~~G 979 (1034)
T KOG4190|consen 901 AILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDGIMHLQDKPPPEPAHFLQSVGPSLVTAQNG 979 (1034)
T ss_pred EEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCCeeeeccCCCCcchhhhhccCceeEEeccC
Confidence 99999999866543321 1111111 3445555555 6777777 77666655544442221111111234456666666
Q ss_pred CcEEEEECCC----CceeEEec-ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEE
Q 019326 232 RSITAWDTNS----GKVAYCIE-DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICV 288 (343)
Q Consensus 232 g~i~i~d~~~----~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~v 288 (343)
..+.+|--.. ...+..++ ....+..++++..|-+. -+..|++.|.|.+
T Consensus 980 n~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~---------afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 980 NILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNC---------AFLAGNEHGAIAL 1032 (1034)
T ss_pred cEEEEEecchhhhhhhhhccccccccCCccceeeeccccc---------hhhccCCCCceee
Confidence 7777774221 11111222 13456778888888877 6888888888875
No 261
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.42 E-value=2.1e-10 Score=99.75 Aligned_cols=213 Identities=17% Similarity=0.157 Sum_probs=132.4
Q ss_pred CCCCCeEEEEec--CceEEEeeC-C--CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEE-EeeCCCe--
Q 019326 40 AHLSPITTVAVS--GTAAASGGT-D--DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLF-STSADGF-- 111 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~-s~~~dg~-- 111 (343)
.+...+.+..|+ |+.|+..+. + ..|.+||+.+++... +... ........|+|++ +.|+ +.+.+|.
T Consensus 215 ~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~-~g~~~~~~wSPDG-----~~La~~~~~~g~~~ 287 (448)
T PRK04792 215 RSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSF-PGINGAPRFSPDG-----KKLALVLSKDGQPE 287 (448)
T ss_pred cCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCC-CCCcCCeeECCCC-----CEEEEEEeCCCCeE
Confidence 456678889998 777776543 2 358889998876433 2222 2344578999999 5554 5566664
Q ss_pred EEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC-C--CeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEE
Q 019326 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-D--DCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFM 188 (343)
Q Consensus 112 i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-d--~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (343)
|+++|+.+++. ..+..+.......+|+|+++.++..+. + ..|.++|+.+++..............+|+|+++.++.
T Consensus 288 Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~ 366 (448)
T PRK04792 288 IYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIM 366 (448)
T ss_pred EEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEE
Confidence 77888887654 334445556677899999988876654 3 3577778877765433222233345789999999887
Q ss_pred E--eCC--cEEEEEcccceeEEEecCCcceEEeeec-CCCeEEE-EeCCCc--EEEEECCCCceeEEecccccccEEEEE
Q 019326 189 V--TEE--KVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFT-GGEDRS--ITAWDTNSGKVAYCIEDAHSARVKGIV 260 (343)
Q Consensus 189 ~--~~~--~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~-~~~dg~--i~i~d~~~~~~~~~~~~~h~~~v~~~~ 260 (343)
. .++ .|.++|+.+++... +..........|+ +++.++. ...+|. +++++. ++.....+. .+.+.+...+
T Consensus 367 ~~~~~g~~~I~~~dl~~g~~~~-lt~~~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~-~~~g~~~~p~ 443 (448)
T PRK04792 367 VNRTNGKFNIARQDLETGAMQV-LTSTRLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLP-AGQGEVKSPA 443 (448)
T ss_pred EEecCCceEEEEEECCCCCeEE-ccCCCCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECc-CCCCCcCCCc
Confidence 7 334 45567777765432 2211111223566 4554444 444443 777776 466666666 5555666667
Q ss_pred EEe
Q 019326 261 VLT 263 (343)
Q Consensus 261 ~~~ 263 (343)
|+|
T Consensus 444 Wsp 446 (448)
T PRK04792 444 WSP 446 (448)
T ss_pred cCC
Confidence 765
No 262
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.41 E-value=2.7e-12 Score=120.01 Aligned_cols=195 Identities=14% Similarity=0.203 Sum_probs=158.1
Q ss_pred CCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC
Q 019326 42 LSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP 119 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 119 (343)
-..|.++.-+ ..+.+||+.||.|++|....++.+..++...+..|+.+.|+..| +.+..+..||.+.+|...
T Consensus 2208 v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qG-----nk~~i~d~dg~l~l~q~~- 2281 (2439)
T KOG1064|consen 2208 VENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQG-----NKFGIVDGDGDLSLWQAS- 2281 (2439)
T ss_pred cCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccC-----CceeeeccCCceeecccC-
Confidence 3445555444 56789999999999999999988888865446899999999999 789999999999999987
Q ss_pred cceeeeeeeccccEEEEEEecCCCEEEEEeC---CCeEEEEEccCCc--eeEEEEcCCcceEEEEeCCCCEEEEE-eCCc
Q 019326 120 FVLLTSVKVHKKGVNDLAVHHSGKLALTVGR---DDCLAMVNLVRGR--RSFYHKIGKEASLIKFDGSGEKFFMV-TEEK 193 (343)
Q Consensus 120 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~---d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 193 (343)
.++....+.|.....++.|-. ..+++++. ++.+.+||..-.. ......+.+.++++++.|..+.++++ .+|.
T Consensus 2282 pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~ 2359 (2439)
T KOG1064|consen 2282 PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGE 2359 (2439)
T ss_pred CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCc
Confidence 467778888999888888876 46666654 6889999975432 22335677889999999999999999 9999
Q ss_pred EEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccc
Q 019326 194 VGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAH 252 (343)
Q Consensus 194 i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h 252 (343)
+++||++..++...++. +....++++|+..|.|+||++.....+.+++..|
T Consensus 2360 v~l~D~rqrql~h~~~~--------~~~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ 2410 (2439)
T KOG1064|consen 2360 VCLFDIRQRQLRHTFQA--------LDTREYFVTGSSEGNIKIWRLSEFGLLHTFPSEH 2410 (2439)
T ss_pred EEEeehHHHHHHHHhhh--------hhhhheeeccCcccceEEEEccccchhhcCchhh
Confidence 99999998877766653 3346799999999999999999888888877444
No 263
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.41 E-value=9.5e-10 Score=88.01 Aligned_cols=219 Identities=14% Similarity=0.125 Sum_probs=142.0
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEe-cCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeE
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAV-SGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVT 87 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 87 (343)
+|.|..||..+ ++..-.. .+..-.....+... .++.+++++.++.|..||..+|+.+..+... .....
T Consensus 2 ~g~l~~~d~~t-------G~~~W~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~-~~~~~ 70 (238)
T PF13360_consen 2 DGTLSALDPRT-------GKELWSY---DLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLP-GPISG 70 (238)
T ss_dssp TSEEEEEETTT-------TEEEEEE---ECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECS-SCGGS
T ss_pred CCEEEEEECCC-------CCEEEEE---ECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeecc-ccccc
Confidence 68899999876 3222211 11111223333244 4788888899999999999999999888754 22111
Q ss_pred EEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee-eecc---ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc
Q 019326 88 SLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV-KVHK---KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR 163 (343)
Q Consensus 88 ~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~---~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~ 163 (343)
.. ...+ ..++.++.++.++.+|..+++.+... .... ...........+..++.+..++.|..+|+++|+
T Consensus 71 ~~-~~~~------~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~ 143 (238)
T PF13360_consen 71 AP-VVDG------GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGK 143 (238)
T ss_dssp GE-EEET------TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTE
T ss_pred ee-eecc------cccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCc
Confidence 12 2223 36777778889999999999998884 4321 112222333337788888889999999999999
Q ss_pred eeEEEEcCCcc-----------eEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCC
Q 019326 164 RSFYHKIGKEA-----------SLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGED 231 (343)
Q Consensus 164 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d 231 (343)
.+......... ..-....++ .++.+ .++.+..+|..+++.+.... ...+.......++.++.++.+
T Consensus 144 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~-~~~~~~~~~~~~~~l~~~~~~ 221 (238)
T PF13360_consen 144 LLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSKP-ISGIYSLPSVDGGTLYVTSSD 221 (238)
T ss_dssp EEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEEC-SS-ECECEECCCTEEEEEETT
T ss_pred EEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEec-CCCccCCceeeCCEEEEEeCC
Confidence 88877664321 122222244 55555 67754444999999766444 333444233367788888899
Q ss_pred CcEEEEECCCCceeEE
Q 019326 232 RSITAWDTNSGKVAYC 247 (343)
Q Consensus 232 g~i~i~d~~~~~~~~~ 247 (343)
+.|..||+++++.+.+
T Consensus 222 ~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 222 GRLYALDLKTGKVVWQ 237 (238)
T ss_dssp TEEEEEETTTTEEEEE
T ss_pred CEEEEEECCCCCEEeE
Confidence 9999999999998754
No 264
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.40 E-value=5e-10 Score=97.46 Aligned_cols=210 Identities=10% Similarity=0.064 Sum_probs=126.6
Q ss_pred eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-CC--eEEEEECCCcceeeeeeeccccEEEEEEe
Q 019326 63 TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-DG--FVSIFDADPFVLLTSVKVHKKGVNDLAVH 139 (343)
Q Consensus 63 ~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~v~~i~~~ 139 (343)
.|.++|.+.... +.+... ...+.+..|+|++ +.|+..+. ++ .|++||+.+++... +....+.....+|+
T Consensus 199 ~l~i~d~dG~~~-~~l~~~-~~~~~~p~wSPDG-----~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wS 270 (448)
T PRK04792 199 QLMIADYDGYNE-QMLLRS-PEPLMSPAWSPDG-----RKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFS 270 (448)
T ss_pred EEEEEeCCCCCc-eEeecC-CCcccCceECCCC-----CEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeEC
Confidence 577778765443 344444 5788999999999 66765543 33 68899998766432 22223334568999
Q ss_pred cCCCEEEE-EeCCCe--EEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eCC--cEEEEEcccceeEEEecCCc
Q 019326 140 HSGKLALT-VGRDDC--LAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEE--KVGIHQAEDAKLLCELDGKK 212 (343)
Q Consensus 140 ~~~~~l~~-~~~d~~--i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~i~~~d~~~~~~~~~~~~~~ 212 (343)
|+|+.|+. .+.++. |+++|+.+++...............|+|+++.++.. .++ .+.++|+.+++.........
T Consensus 271 PDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~ 350 (448)
T PRK04792 271 PDGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGE 350 (448)
T ss_pred CCCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCC
Confidence 99997765 455664 888898887654443334455678999999988776 233 46666777766443222222
Q ss_pred ceEEeeec-CCCeEEEEeC-CC--cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc-CCCc--
Q 019326 213 RILCAAPG-ENGVLFTGGE-DR--SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS-SDGV-- 285 (343)
Q Consensus 213 ~i~~~~~~-~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~-~dg~-- 285 (343)
......|+ ++++++..+. ++ .|.++|+.+++. ..+. .. .......|+|++. +|+..+ .+|.
T Consensus 351 ~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~-~~lt-~~-~~d~~ps~spdG~---------~I~~~~~~~g~~~ 418 (448)
T PRK04792 351 QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM-QVLT-ST-RLDESPSVAPNGT---------MVIYSTTYQGKQV 418 (448)
T ss_pred CCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe-EEcc-CC-CCCCCceECCCCC---------EEEEEEecCCceE
Confidence 23345676 4556555443 44 466678877764 3333 11 1112335666665 665544 4443
Q ss_pred EEEEecc
Q 019326 286 ICVWDVR 292 (343)
Q Consensus 286 i~vwd~~ 292 (343)
+.+++.+
T Consensus 419 l~~~~~~ 425 (448)
T PRK04792 419 LAAVSID 425 (448)
T ss_pred EEEEECC
Confidence 6666764
No 265
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.40 E-value=6.1e-11 Score=101.95 Aligned_cols=256 Identities=13% Similarity=0.114 Sum_probs=181.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCC-CCC--cceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYS-SDQ--KTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLG 76 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~-~~~--~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~ 76 (343)
.+++|+.||.+++..+.+....- +.+ ....+..-+++.||.+.|.-+.|+ .+.|-|...+|.|.+|-+-.+.-..
T Consensus 28 yIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~E 107 (1189)
T KOG2041|consen 28 YIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCE 107 (1189)
T ss_pred eEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHH
Confidence 37899999999999987644321 111 223344567889999999999999 6788899999999999998886554
Q ss_pred Eec-cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCccee-eeeeeccccEEEEEEecCCCEEEEEeCCCeE
Q 019326 77 AIH-HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL-TSVKVHKKGVNDLAVHHSGKLALTVGRDDCL 154 (343)
Q Consensus 77 ~~~-~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i 154 (343)
+.. ....+.|.+++|+.+| ..+...-.||.|.+=.++..+.- ..++ ......+.|++|.+.++.+-.+|.+
T Consensus 108 EMiNnRnKSvV~SmsWn~dG-----~kIcIvYeDGavIVGsvdGNRIwgKeLk--g~~l~hv~ws~D~~~~Lf~~ange~ 180 (1189)
T KOG2041|consen 108 EMINNRNKSVVVSMSWNLDG-----TKICIVYEDGAVIVGSVDGNRIWGKELK--GQLLAHVLWSEDLEQALFKKANGET 180 (1189)
T ss_pred HHhhCcCccEEEEEEEcCCC-----cEEEEEEccCCEEEEeeccceecchhcc--hheccceeecccHHHHHhhhcCCcE
Confidence 432 2225789999999999 78999999999988777653321 1122 2234568899999888888889999
Q ss_pred EEEEccCCc-------e-eE----EEEcCCcceEEEE--------eCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcc
Q 019326 155 AMVNLVRGR-------R-SF----YHKIGKEASLIKF--------DGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKR 213 (343)
Q Consensus 155 ~~wd~~~~~-------~-~~----~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~ 213 (343)
.++|.+..- + +. ....+..+..+.| .|+...++++ .+|.+.+..-.+......+...-.
T Consensus 181 hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dtgm~ 260 (1189)
T KOG2041|consen 181 HLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDTGMK 260 (1189)
T ss_pred EEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEecccE
Confidence 999975431 1 10 1112334555555 3588899999 888888876666555555555577
Q ss_pred eEEeeec-CCCeEEEEeCC---------CcEEEEECCCCceeEEecccccccEEEEEEEecCC
Q 019326 214 ILCAAPG-ENGVLFTGGED---------RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 214 i~~~~~~-~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
+....|+ +|..|+.++.+ +.|.+|..- |+.+.+++ -....|+++.|-..+-
T Consensus 261 ~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~-G~i~gtlk-vpg~~It~lsWEg~gL 321 (1189)
T KOG2041|consen 261 IVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPY-GHIVGTLK-VPGSCITGLSWEGTGL 321 (1189)
T ss_pred eecceecCCCcEEEEccCcccccCccccceEEEeccc-hhheEEEe-cCCceeeeeEEcCCce
Confidence 8888887 46677777643 356666544 77778887 7777888888876653
No 266
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.40 E-value=2.3e-10 Score=88.16 Aligned_cols=200 Identities=19% Similarity=0.220 Sum_probs=134.9
Q ss_pred CeEEEEECCCcceee--ee-eeccccEEEEEEec---CCC-EEEEEeCCCeEEEEEccCCceeEEEE-c-----CC-cce
Q 019326 110 GFVSIFDADPFVLLT--SV-KVHKKGVNDLAVHH---SGK-LALTVGRDDCLAMVNLVRGRRSFYHK-I-----GK-EAS 175 (343)
Q Consensus 110 g~i~iwd~~~~~~~~--~~-~~~~~~v~~i~~~~---~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~-~-----~~-~~~ 175 (343)
|.+.+|++...+... ++ ......+..+.|.. ++. .++-+..+|.|.++............ + .. ...
T Consensus 46 Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~l 125 (339)
T KOG0280|consen 46 GKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEAL 125 (339)
T ss_pred cceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeee
Confidence 455666665444332 11 11233455566643 233 55666778888888765443222221 1 11 245
Q ss_pred EEEEeCCCCEEEEE-eCCcEEEEEcccceeEE--Eec-CCcceEEeeec--CCCeEEEEeCCCcEEEEECC-CCceeEEe
Q 019326 176 LIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLC--ELD-GKKRILCAAPG--ENGVLFTGGEDRSITAWDTN-SGKVAYCI 248 (343)
Q Consensus 176 ~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~--~~~-~~~~i~~~~~~--~~~~l~~~~~dg~i~i~d~~-~~~~~~~~ 248 (343)
++.|++.+..+++. .+|.+.+.+.....+.. ..+ |..+.....|+ +.+++++|++|+.+..||++ .++.+..-
T Consensus 126 slD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n 205 (339)
T KOG0280|consen 126 SLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHN 205 (339)
T ss_pred EEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeec
Confidence 67889999999998 88998866655544443 444 78888888887 45799999999999999999 45555553
Q ss_pred cccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCc
Q 019326 249 EDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKS 321 (343)
Q Consensus 249 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 321 (343)
..-|...|.++.-+|.. +.+++||+.|-.|++||.++.. .|+......+.|..+..+|.-.
T Consensus 206 ~kvH~~GV~SI~ss~~~--------~~~I~TGsYDe~i~~~DtRnm~----kPl~~~~v~GGVWRi~~~p~~~ 266 (339)
T KOG0280|consen 206 SKVHTSGVVSIYSSPPK--------PTYIATGSYDECIRVLDTRNMG----KPLFKAKVGGGVWRIKHHPEIF 266 (339)
T ss_pred ceeeecceEEEecCCCC--------CceEEEeccccceeeeehhccc----CccccCccccceEEEEecchhh
Confidence 33788999999877653 3499999999999999999642 2555666667799988888643
No 267
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.37 E-value=1.6e-09 Score=86.74 Aligned_cols=213 Identities=16% Similarity=0.164 Sum_probs=141.2
Q ss_pred CCeEEEEEcCCCeeeeEeccCC-CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEe
Q 019326 61 DDTIHLYDLSTSSSLGAIHHHE-SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVH 139 (343)
Q Consensus 61 dg~i~iwd~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~ 139 (343)
+|.|..||..+|+.+....... .....+.....+ ..+++++.++.|..||..+++.+..+.... .+.... .
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~-~~~~~~-~ 73 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDG------GRVYVASGDGNLYALDAKTGKVLWRFDLPG-PISGAP-V 73 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEET------TEEEEEETTSEEEEEETTTSEEEEEEECSS-CGGSGE-E
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeC------CEEEEEcCCCEEEEEECCCCCEEEEeeccc-ccccee-e
Confidence 6899999999999999886531 122332233333 478888999999999999999988887522 211111 2
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCceeEEE-EcCC----cceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCc-
Q 019326 140 HSGKLALTVGRDDCLAMVNLVRGRRSFYH-KIGK----EASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKK- 212 (343)
Q Consensus 140 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~- 212 (343)
..+..+++++.++.++.+|..+|+..... .... ..........+..++++ .++.+..+|+++++.+.......
T Consensus 74 ~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~ 153 (238)
T PF13360_consen 74 VDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEP 153 (238)
T ss_dssp EETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT
T ss_pred ecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCC
Confidence 23456777778889999999999988874 3321 11223333347777777 69999999999999988876322
Q ss_pred c----e-------EEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc
Q 019326 213 R----I-------LCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS 281 (343)
Q Consensus 213 ~----i-------~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 281 (343)
+ + ..+.+ .++.++.++.++.+..+|..+++.+.... ...+..+ ....+. .|+.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~g~~~~~d~~tg~~~w~~~---~~~~~~~-~~~~~~---------~l~~~~ 219 (238)
T PF13360_consen 154 RGSSPISSFSDINGSPVI-SDGRVYVSSGDGRVVAVDLATGEKLWSKP---ISGIYSL-PSVDGG---------TLYVTS 219 (238)
T ss_dssp -SS--EEEETTEEEEEEC-CTTEEEEECCTSSEEEEETTTTEEEEEEC---SS-ECEC-EECCCT---------EEEEEE
T ss_pred CCCcceeeecccccceEE-ECCEEEEEcCCCeEEEEECCCCCEEEEec---CCCccCC-ceeeCC---------EEEEEe
Confidence 1 1 22333 33477778878864444999999765333 2222221 223333 777777
Q ss_pred CCCcEEEEeccCcc
Q 019326 282 SDGVICVWDVRMAI 295 (343)
Q Consensus 282 ~dg~i~vwd~~~~~ 295 (343)
.++.|..||+++++
T Consensus 220 ~~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 220 SDGRLYALDLKTGK 233 (238)
T ss_dssp TTTEEEEEETTTTE
T ss_pred CCCEEEEEECCCCC
Confidence 99999999999985
No 268
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.36 E-value=4.5e-10 Score=94.42 Aligned_cols=187 Identities=15% Similarity=0.132 Sum_probs=146.4
Q ss_pred ceEEEeeCCCeEEEEECCCcceeeeeeec---cccEEEEEE------ec--------------CCCEEEEEeCCCeEEEE
Q 019326 101 RNLFSTSADGFVSIFDADPFVLLTSVKVH---KKGVNDLAV------HH--------------SGKLALTVGRDDCLAMV 157 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~~v~~i~~------~~--------------~~~~l~~~~~d~~i~~w 157 (343)
.+++....||.+++|+...++....+... .+...+..| +| +...++-|...|.|.+|
T Consensus 6 ~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~y 85 (541)
T KOG4547|consen 6 DYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLY 85 (541)
T ss_pred heEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEE
Confidence 68999999999999999888877766532 223333333 22 23478888889999999
Q ss_pred EccCCceeEEEE---cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCC
Q 019326 158 NLVRGRRSFYHK---IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGED 231 (343)
Q Consensus 158 d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~d 231 (343)
+...++...... +.+.+.++.++.+-..|.++ .|..+..|+....+.++... .+..+.+++++ ++..+++++
T Consensus 86 s~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as-- 163 (541)
T KOG4547|consen 86 SVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS-- 163 (541)
T ss_pred EecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--
Confidence 999998776665 45778889988888899988 99999999999999998888 55667888887 456777765
Q ss_pred CcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCC-eEEEEEcCCCcEEEEeccCc
Q 019326 232 RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENP-YLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 232 g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~-~~l~s~~~dg~i~vwd~~~~ 294 (343)
+.|.+||+++++.+..+. +|.++|+++.|...-. ...| ++|.+...+.-+.+|-++..
T Consensus 164 ~~ik~~~~~~kevv~~ft-gh~s~v~t~~f~~~~~----g~~G~~vLssa~~~r~i~~w~v~~~ 222 (541)
T KOG4547|consen 164 RQIKVLDIETKEVVITFT-GHGSPVRTLSFTTLID----GIIGKYVLSSAAAERGITVWVVEKE 222 (541)
T ss_pred ceEEEEEccCceEEEEec-CCCcceEEEEEEEecc----ccccceeeeccccccceeEEEEEcc
Confidence 589999999999999999 9999999999988711 1112 25556667778999988764
No 269
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.36 E-value=5.7e-12 Score=117.92 Aligned_cols=200 Identities=17% Similarity=0.272 Sum_probs=150.4
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
.++|+.||.|++|.-.. +. +.....+ .|. ..|+.+.|+ |+.+..+..||.+.+|... .+.....+.
T Consensus 2223 Yltgs~dgsv~~~~w~~-------~~--~v~~~rt-~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qc 2290 (2439)
T KOG1064|consen 2223 YLTGSQDGSVRMFEWGH-------GQ--QVVCFRT-AGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQC 2290 (2439)
T ss_pred EEecCCCceEEEEeccC-------CC--eEEEeec-cCc-chhhhhhhcccCCceeeeccCCceeecccC-Ccceecccc
Confidence 47999999999999865 11 1222222 244 889999999 9999999999999999987 677778888
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeC---CCeEEEEECC--Cc-ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeE
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSA---DGFVSIFDAD--PF-VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCL 154 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~---dg~i~iwd~~--~~-~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i 154 (343)
| +...+.++|-.. .+++++. ++.+.+||.- .+ .++. ..|.+.++++++-|..+.|++|+.+|.|
T Consensus 2291 h-nk~~~Df~Fi~s-------~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v 2360 (2439)
T KOG1064|consen 2291 H-NKALSDFRFIGS-------LLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEV 2360 (2439)
T ss_pred C-Cccccceeeeeh-------hhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcE
Confidence 9 889999999863 4666654 6799999972 22 2333 7799999999999999999999999999
Q ss_pred EEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcce--------EEeeecCCCeE
Q 019326 155 AMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRI--------LCAAPGENGVL 225 (343)
Q Consensus 155 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i--------~~~~~~~~~~l 225 (343)
++||++..+....+.. ++ ...+|+++ ..|.++||++.....+..+++...- ..+.....+.+
T Consensus 2361 ~l~D~rqrql~h~~~~--------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ak~gfFr~~g~Q~~v~~~nri 2431 (2439)
T KOG1064|consen 2361 CLFDIRQRQLRHTFQA--------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEHAKQGFFRNIGMQINVGQCNRI 2431 (2439)
T ss_pred EEeehHHHHHHHHhhh--------hh-hhheeeccCcccceEEEEccccchhhcCchhhcccchhhhcCceeeeccCceE
Confidence 9999987765433322 34 56778888 9999999999998888877632111 11222245677
Q ss_pred EEEeCCCc
Q 019326 226 FTGGEDRS 233 (343)
Q Consensus 226 ~~~~~dg~ 233 (343)
++|+.||+
T Consensus 2432 fsCgad~~ 2439 (2439)
T KOG1064|consen 2432 FSCGADGT 2439 (2439)
T ss_pred EEecCCCC
Confidence 77777763
No 270
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=99.35 E-value=1.3e-09 Score=94.65 Aligned_cols=222 Identities=14% Similarity=0.115 Sum_probs=153.3
Q ss_pred EeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--------C------ceEEEeeCCCeEEEEEcC
Q 019326 5 AGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--------G------TAAASGGTDDTIHLYDLS 70 (343)
Q Consensus 5 ~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--------~------~~l~s~~~dg~i~iwd~~ 70 (343)
+-+....|.+.|... .+.++.+.-|...|+.+.|. . -.+|++...|.|.+||..
T Consensus 30 AygshslV~VVDs~s------------~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~ 97 (1062)
T KOG1912|consen 30 AYGSHSLVSVVDSRS------------LQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFV 97 (1062)
T ss_pred EEecCceEEEEehhh------------hhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEeh
Confidence 334446778888776 67788888999999999996 1 257888889999999999
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEec-CCCEEEEEe
Q 019326 71 TSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH-SGKLALTVG 149 (343)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~ 149 (343)
.+..+..+..+ ..++..++|.+..+-. ...|++-....++.+|+..+|+.............|+.+.| +.+.+..-+
T Consensus 98 ~~s~~~~l~~~-~~~~qdl~W~~~rd~S-rd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~ 175 (1062)
T KOG1912|consen 98 LASVINWLSHS-NDSVQDLCWVPARDDS-RDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLG 175 (1062)
T ss_pred hhhhhhhhcCC-CcchhheeeeeccCcc-hheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEc
Confidence 99888888888 8999999998765311 14667777778999999999999988876666777899988 456777777
Q ss_pred CCCeEEEEEccCC-------ceeEEEEc-CC-----------------c--------ceEEEEeCCCCEEEEE-eCCcEE
Q 019326 150 RDDCLAMVNLVRG-------RRSFYHKI-GK-----------------E--------ASLIKFDGSGEKFFMV-TEEKVG 195 (343)
Q Consensus 150 ~d~~i~~wd~~~~-------~~~~~~~~-~~-----------------~--------~~~~~~~~~~~~~~~~-~~~~i~ 195 (343)
..|.+.+-+.-.. +....... .. + ...++|+|.-+.++.. ....+.
T Consensus 176 s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prell 255 (1062)
T KOG1912|consen 176 SKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELL 255 (1062)
T ss_pred cCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceE
Confidence 7777777664321 11111110 00 0 1125567765544444 777888
Q ss_pred EEEcccceeEEEec---CCcceEEeeecC-CCeEEEEeCCCcEEEEECC
Q 019326 196 IHQAEDAKLLCELD---GKKRILCAAPGE-NGVLFTGGEDRSITAWDTN 240 (343)
Q Consensus 196 ~~d~~~~~~~~~~~---~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~ 240 (343)
++|++-..++.... ...++..+-..+ ...|++.-.||.+.+|-.+
T Consensus 256 v~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk 304 (1062)
T KOG1912|consen 256 VFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRK 304 (1062)
T ss_pred EEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEee
Confidence 88887776666665 222344444432 3467777777777777543
No 271
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.35 E-value=7.5e-09 Score=98.51 Aligned_cols=233 Identities=11% Similarity=0.116 Sum_probs=153.8
Q ss_pred EEEec---CceEEEeeCCCeEEEEEcCCCeeeeEecc-CC------------CCCeEEEEEeCCCCCCCCceEEEe-eCC
Q 019326 47 TVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHH-HE------------SSSVTSLAFYTPQNLSVPRNLFST-SAD 109 (343)
Q Consensus 47 ~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~------------~~~v~~l~~~~~~~~~~~~~l~s~-~~d 109 (343)
.++++ +..+++-...+.|++||.. ++.+..+.. .. -.....+++.+++ +.|+.+ ..+
T Consensus 572 gvavd~~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~g-----n~LYVaDt~n 645 (1057)
T PLN02919 572 KLAIDLLNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKK-----NLLYVADTEN 645 (1057)
T ss_pred eEEEECCCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCC-----CEEEEEeCCC
Confidence 46665 5567777778899999986 444444432 10 1235788998877 455444 456
Q ss_pred CeEEEEECCCcceeeeeeec-----------------cccEEEEEEec-CCCEEEEEeCCCeEEEEEccCCceeEEEE--
Q 019326 110 GFVSIFDADPFVLLTSVKVH-----------------KKGVNDLAVHH-SGKLALTVGRDDCLAMVNLVRGRRSFYHK-- 169 (343)
Q Consensus 110 g~i~iwd~~~~~~~~~~~~~-----------------~~~v~~i~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-- 169 (343)
+.|+++|..++. +.++.+- -.....++++| ++..+++.+.++.|++||..++.......
T Consensus 646 ~~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G 724 (1057)
T PLN02919 646 HALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDG 724 (1057)
T ss_pred ceEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCC
Confidence 789999987643 3333210 01236799999 56667777788999999988765432111
Q ss_pred -------------cCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEe-------------c-C--------Cc
Q 019326 170 -------------IGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCEL-------------D-G--------KK 212 (343)
Q Consensus 170 -------------~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~-------------~-~--------~~ 212 (343)
.-..+..++++|++..++++ .++.|++||+.++...... . . -.
T Consensus 725 ~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~ 804 (1057)
T PLN02919 725 YERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQ 804 (1057)
T ss_pred ccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhcc
Confidence 01235669999999877666 6789999999876532111 0 0 01
Q ss_pred ceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecc------------cccccEEEEEEEecCCCCCCCCCCeEEEE
Q 019326 213 RILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIED------------AHSARVKGIVVLTKNDGGSTAENPYLVAS 279 (343)
Q Consensus 213 ~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------------~h~~~v~~~~~~~~~~~~~~~~~~~~l~s 279 (343)
....++++ +++++++-..++.|++||..++........ +.-....+|++++++. ++++
T Consensus 805 ~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~---------lyVa 875 (1057)
T PLN02919 805 HPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGR---------LFVA 875 (1057)
T ss_pred CCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCC---------EEEE
Confidence 23466776 456777778899999999987765432211 1123567888888776 8899
Q ss_pred EcCCCcEEEEeccCcc
Q 019326 280 ASSDGVICVWDVRMAI 295 (343)
Q Consensus 280 ~~~dg~i~vwd~~~~~ 295 (343)
-+.++.|++||++++.
T Consensus 876 Dt~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 876 DTNNSLIRYLDLNKGE 891 (1057)
T ss_pred ECCCCEEEEEECCCCc
Confidence 9999999999998863
No 272
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=99.31 E-value=6e-10 Score=96.77 Aligned_cols=308 Identities=11% Similarity=0.107 Sum_probs=199.5
Q ss_pred CeeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec------CceEEEeeCCCeEEEEEcCCCee
Q 019326 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS------GTAAASGGTDDTIHLYDLSTSSS 74 (343)
Q Consensus 1 ~~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~------~~~l~s~~~dg~i~iwd~~~~~~ 74 (343)
+.|+++...|.|.+||... ...+..+..|.++|..++|- ...|++-....++.+|+..+|+.
T Consensus 80 lliAsaD~~GrIil~d~~~------------~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k 147 (1062)
T KOG1912|consen 80 LLIASADISGRIILVDFVL------------ASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEK 147 (1062)
T ss_pred eeEEeccccCcEEEEEehh------------hhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCce
Confidence 3678888899999999987 34455566788999999986 25677777778999999999999
Q ss_pred eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC-------------------------------------
Q 019326 75 LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA------------------------------------- 117 (343)
Q Consensus 75 ~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~------------------------------------- 117 (343)
.+..... .....|+.+.|-.. +.+..-+..|.+.+-+.
T Consensus 148 ~Wk~~ys-~~iLs~f~~DPfd~----rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts 222 (1062)
T KOG1912|consen 148 FWKYDYS-HEILSCFRVDPFDS----RHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTS 222 (1062)
T ss_pred eeccccC-CcceeeeeeCCCCc----ceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccC
Confidence 8888765 56677788877662 44444444555544432
Q ss_pred -------------------------------------CCcceeeeeeeccccEEEEEEecCC--CEEEEEeCCCeEEEEE
Q 019326 118 -------------------------------------DPFVLLTSVKVHKKGVNDLAVHHSG--KLALTVGRDDCLAMVN 158 (343)
Q Consensus 118 -------------------------------------~~~~~~~~~~~~~~~v~~i~~~~~~--~~l~~~~~d~~i~~wd 158 (343)
+-..++....-..+.+.-+.+.|++ ..|++...||.+.+|-
T Consensus 223 ~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirv 302 (1062)
T KOG1912|consen 223 TPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRV 302 (1062)
T ss_pred CCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEE
Confidence 1112222222233444556666654 5789999999999997
Q ss_pred ccCCceeEEE-------EcCCcc-----------eEEEEeCCCC-EEEEE-eCCcEEEEEcccceeEEEe----------
Q 019326 159 LVRGRRSFYH-------KIGKEA-----------SLIKFDGSGE-KFFMV-TEEKVGIHQAEDAKLLCEL---------- 208 (343)
Q Consensus 159 ~~~~~~~~~~-------~~~~~~-----------~~~~~~~~~~-~~~~~-~~~~i~~~d~~~~~~~~~~---------- 208 (343)
-+........ ....++ ......|... .++.. .++...+|.+.+++.-...
T Consensus 303 rk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~p 382 (1062)
T KOG1912|consen 303 RKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLP 382 (1062)
T ss_pred eeccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCccccccccccccc
Confidence 6542111111 111222 2223344433 33333 7888888888754321100
Q ss_pred ------------------c----CCcceEEeeec-----------C-C-------CeEEEEeCCCcEEEEECCCCceeEE
Q 019326 209 ------------------D----GKKRILCAAPG-----------E-N-------GVLFTGGEDRSITAWDTNSGKVAYC 247 (343)
Q Consensus 209 ------------------~----~~~~i~~~~~~-----------~-~-------~~l~~~~~dg~i~i~d~~~~~~~~~ 247 (343)
. |....++.... + + .+++.|...|+|.++|+.++.....
T Consensus 383 f~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~ 462 (1062)
T KOG1912|consen 383 FDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVAAS 462 (1062)
T ss_pred ccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhhhhh
Confidence 0 11122221110 1 1 2688999999999999999999889
Q ss_pred ecccccccEEEEEEEecCCCCCCCCCCeEEEEEc----------CCCcEEEEeccCccccCCCcccccccccceeEEEcC
Q 019326 248 IEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS----------SDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGS 317 (343)
Q Consensus 248 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s 317 (343)
+. .|...|.++.|..... |++.+ .-+.+.+=|+++|.... +.........+|..+..|
T Consensus 463 fs-vht~~VkgleW~g~ss----------lvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~-fR~l~~~despI~~irvS 530 (1062)
T KOG1912|consen 463 FS-VHTSLVKGLEWLGNSS----------LVSFSYSHVNSASGGVRNDLVVTDLRTGLSKR-FRGLQKPDESPIRAIRVS 530 (1062)
T ss_pred hc-ccccceeeeeecccee----------EEEeeeccccccccceeeeEEEEEcccccccc-cccCCCCCcCcceeeeec
Confidence 98 9999999999988763 54443 23467888999984222 222234455689999999
Q ss_pred CCCceeccccCCCCCCCccc
Q 019326 318 STKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ 337 (343)
..+.|++....++.+..++.
T Consensus 531 ~~~~yLai~Fr~~plEiwd~ 550 (1062)
T KOG1912|consen 531 SSGRYLAILFRREPLEIWDL 550 (1062)
T ss_pred ccCceEEEEecccchHHHhh
Confidence 99999999988887766554
No 273
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.31 E-value=7.7e-11 Score=94.51 Aligned_cols=158 Identities=16% Similarity=0.123 Sum_probs=122.1
Q ss_pred EEEEEEecCCCEEEEEeCCCeEEEEEccCCce----eEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEE---EEccccee
Q 019326 133 VNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR----SFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGI---HQAEDAKL 204 (343)
Q Consensus 133 v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~---~d~~~~~~ 204 (343)
...+..++.+++++++..+....+++++.... ......+.....+.+..+......+ ..|.++- |....+..
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~ 144 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRC 144 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCc
Confidence 44556678888999888888887888766543 2334445566667777776666666 5555544 44444777
Q ss_pred EEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC
Q 019326 205 LCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD 283 (343)
Q Consensus 205 ~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d 283 (343)
...+.|-..++.++++ ++++++++..|..|++-.......+..+..||..-|..++..++. .|+|+|.|
T Consensus 145 ~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~----------~LlS~sGD 214 (390)
T KOG3914|consen 145 EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY----------LLLSGSGD 214 (390)
T ss_pred chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc----------eeeecCCC
Confidence 7777799999999999 568999999999999998887777888877899999999998876 68999999
Q ss_pred CcEEEEeccCccccCCC
Q 019326 284 GVICVWDVRMAIKEKPL 300 (343)
Q Consensus 284 g~i~vwd~~~~~~~~~~ 300 (343)
++|++||+.+++.....
T Consensus 215 ~tlr~Wd~~sgk~L~t~ 231 (390)
T KOG3914|consen 215 KTLRLWDITSGKLLDTC 231 (390)
T ss_pred CcEEEEecccCCccccc
Confidence 99999999998654433
No 274
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.29 E-value=5e-09 Score=90.59 Aligned_cols=215 Identities=11% Similarity=0.005 Sum_probs=127.1
Q ss_pred CCCCeEEEEec--Cce---EEEeeCCC--eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee-CCC--
Q 019326 41 HLSPITTVAVS--GTA---AASGGTDD--TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS-ADG-- 110 (343)
Q Consensus 41 h~~~v~~l~~~--~~~---l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~-~dg-- 110 (343)
....+.+-+|+ |+. +++...+| .|.+.++.+++...... . .+.....+|+|++ +.|+..+ .+|
T Consensus 183 ~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~-~-~g~~~~p~wSPDG-----~~Laf~s~~~g~~ 255 (428)
T PRK01029 183 EHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILA-L-QGNQLMPTFSPRK-----KLLAFISDRYGNP 255 (428)
T ss_pred CCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeec-C-CCCccceEECCCC-----CEEEEEECCCCCc
Confidence 44556667888 443 23444443 57777888775443332 2 3445678999999 5666443 223
Q ss_pred --eEEEEECCCc---ceeeeeeeccccEEEEEEecCCCEEEEEe-CCCeEEEE--EccC-CceeEEE-EcCCcceEEEEe
Q 019326 111 --FVSIFDADPF---VLLTSVKVHKKGVNDLAVHHSGKLALTVG-RDDCLAMV--NLVR-GRRSFYH-KIGKEASLIKFD 180 (343)
Q Consensus 111 --~i~iwd~~~~---~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-~d~~i~~w--d~~~-~~~~~~~-~~~~~~~~~~~~ 180 (343)
.+..|++..+ +.......+.......+|+|||+.|+..+ .+|...+| ++.. +...... .....+....|+
T Consensus 256 di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wS 335 (428)
T PRK01029 256 DLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWS 335 (428)
T ss_pred ceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeEC
Confidence 3444776542 33333322233446789999999877665 45654555 4432 2222222 223456778999
Q ss_pred CCCCEEEEE-e---CCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEE-EEeC--CCcEEEEECCCCceeEEecccc
Q 019326 181 GSGEKFFMV-T---EEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLF-TGGE--DRSITAWDTNSGKVAYCIEDAH 252 (343)
Q Consensus 181 ~~~~~~~~~-~---~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-~~~~--dg~i~i~d~~~~~~~~~~~~~h 252 (343)
|+|+.++.. . ...|.+||+.+++..........+....|++ ++.|+ ++.. ...|+++|+..++...... .
T Consensus 336 PDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~--~ 413 (428)
T PRK01029 336 PDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVI--G 413 (428)
T ss_pred CCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec--C
Confidence 999988876 2 2468999998887654433444566778884 55554 3333 3568888988776443332 3
Q ss_pred cccEEEEEEEec
Q 019326 253 SARVKGIVVLTK 264 (343)
Q Consensus 253 ~~~v~~~~~~~~ 264 (343)
...+...+|+|.
T Consensus 414 ~g~~~~p~Ws~~ 425 (428)
T PRK01029 414 SGEKRFPSWGAF 425 (428)
T ss_pred CCcccCceecCC
Confidence 444556677654
No 275
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=99.29 E-value=2.2e-09 Score=81.91 Aligned_cols=210 Identities=13% Similarity=0.063 Sum_probs=142.8
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEe-ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecc
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAI-HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHK 130 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 130 (343)
-.+||.|+..|...+|...+.+-...+ ..+ ...|+-+.=.-+.+ -.+..++.|.++++.+++.+..........
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd~s-nn~v~~~~r~cd~~----~~~~i~sndht~k~~~~~~~s~~~~~h~~~ 158 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTNDGHLYQCDVS-NNDVTLVKRYCDLK----FPLNIASNDHTGKTMVVSGDSNKFAVHNQN 158 (344)
T ss_pred ccEEEeccccceeeeecccCcccceeeeccc-ccchhhhhhhcccc----cceeeccCCcceeEEEEecCcccceeeccc
Confidence 457999999999999999876543333 333 33333221111111 357778889999998886544332222111
Q ss_pred ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCcee----EEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeE
Q 019326 131 KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRS----FYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLL 205 (343)
Q Consensus 131 ~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~ 205 (343)
-.+.+++++++++++++.+....|..|.+...... ........--+..|+.....++++ .||.+.|||++.....
T Consensus 159 ~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tp 238 (344)
T KOG4532|consen 159 LTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATP 238 (344)
T ss_pred cceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccc
Confidence 23889999999999999999999999988654321 222334556778999999999999 9999999999975543
Q ss_pred EEe------cCCcceEEeeecCC---CeEEEEeCCCcEEEEECCCCceeEEec------cccc-ccEEEEEEEecCC
Q 019326 206 CEL------DGKKRILCAAPGEN---GVLFTGGEDRSITAWDTNSGKVAYCIE------DAHS-ARVKGIVVLTKND 266 (343)
Q Consensus 206 ~~~------~~~~~i~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~------~~h~-~~v~~~~~~~~~~ 266 (343)
... .|.+.+..+.|+.+ .+|+..-.-+.+.+.|++++...+.+. ..|. ..|.+-.|+.++.
T Consensus 239 m~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~ 315 (344)
T KOG4532|consen 239 MAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENE 315 (344)
T ss_pred hhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCc
Confidence 322 17788999999843 466666667889999999987655443 0122 2366666666655
No 276
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.28 E-value=1e-10 Score=100.59 Aligned_cols=224 Identities=11% Similarity=0.127 Sum_probs=164.9
Q ss_pred CCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe---------------eeeEeccCCCCCeEEEEEeCCCCCCCCceEE
Q 019326 42 LSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS---------------SLGAIHHHESSSVTSLAFYTPQNLSVPRNLF 104 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~---------------~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~ 104 (343)
.....|++|+ .+++|+|+.||.+++..+.+.. .-+.+.+| +..|..+.|+.+. +.|-
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH-~~sV~vvTWNe~~-----QKLT 87 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGH-NASVMVVTWNENN-----QKLT 87 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccC-cceEEEEEecccc-----cccc
Confidence 4568899999 8899999999999999886531 22456788 9999999999887 7899
Q ss_pred EeeCCCeEEEEECCCcceeeeee--eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC-CcceEEEEeC
Q 019326 105 STSADGFVSIFDADPFVLLTSVK--VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG-KEASLIKFDG 181 (343)
Q Consensus 105 s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~ 181 (343)
+...+|.|.+|-+-.+.-...+- ..++.|.+++|+.+|..+.....||.|.+=.+..+ .+.-..+. .....+.|++
T Consensus 88 tSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGN-RIwgKeLkg~~l~hv~ws~ 166 (1189)
T KOG2041|consen 88 TSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGN-RIWGKELKGQLLAHVLWSE 166 (1189)
T ss_pred ccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccc-eecchhcchheccceeecc
Confidence 99999999999987665433332 24568999999999999999999999987766543 33333333 3455789999
Q ss_pred CCCEEEEE-eCCcEEEEEccccee-----EEEec-------CCcceEEeeec---------CCCeEEEEeCCCcEEEEEC
Q 019326 182 SGEKFFMV-TEEKVGIHQAEDAKL-----LCELD-------GKKRILCAAPG---------ENGVLFTGGEDRSITAWDT 239 (343)
Q Consensus 182 ~~~~~~~~-~~~~i~~~d~~~~~~-----~~~~~-------~~~~i~~~~~~---------~~~~l~~~~~dg~i~i~d~ 239 (343)
+.+.++.+ .+|.+.+||.+..-. ..... .+..+..+.|. +...|+.+-..|.+.+..-
T Consensus 167 D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~ 246 (1189)
T KOG2041|consen 167 DLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRS 246 (1189)
T ss_pred cHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhh
Confidence 99998888 899999999764211 01011 12235555553 2237889999999998866
Q ss_pred CCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC
Q 019326 240 NSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD 283 (343)
Q Consensus 240 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d 283 (343)
.+......+. ..-.+.+..|++++. .|+.++.|
T Consensus 247 eND~~Pvv~d--tgm~~vgakWnh~G~---------vLAvcG~~ 279 (1189)
T KOG2041|consen 247 ENDPEPVVVD--TGMKIVGAKWNHNGA---------VLAVCGND 279 (1189)
T ss_pred cCCCCCeEEe--cccEeecceecCCCc---------EEEEccCc
Confidence 5554444444 347788999999987 88888865
No 277
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.26 E-value=5.2e-08 Score=77.79 Aligned_cols=254 Identities=13% Similarity=0.117 Sum_probs=165.1
Q ss_pred CCeEEEEEcCCCe-eee--EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC---CeEEEEECCC--ccee--eeeeecc
Q 019326 61 DDTIHLYDLSTSS-SLG--AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD---GFVSIFDADP--FVLL--TSVKVHK 130 (343)
Q Consensus 61 dg~i~iwd~~~~~-~~~--~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~--~~~~--~~~~~~~ 130 (343)
+.-|.+|++++.. .+. .+-.. ....+-|+|+|+. +.|.++..+ |.|..|.++. |++. .......
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~-~~nptyl~~~~~~-----~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g 88 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAE-LGNPTYLAVNPDQ-----RHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPG 88 (346)
T ss_pred CCceEEEEEeCcccccchhhhccc-cCCCceEEECCCC-----CEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCC
Confidence 4569999998432 111 12233 5778899999998 788887664 6787777764 4322 2222223
Q ss_pred ccEEEEEEecCCCEEEEEeC-CCeEEEEEccC-Cce---eEEEEcCCc----------ceEEEEeCCCCEEEEE--eCCc
Q 019326 131 KGVNDLAVHHSGKLALTVGR-DDCLAMVNLVR-GRR---SFYHKIGKE----------ASLIKFDGSGEKFFMV--TEEK 193 (343)
Q Consensus 131 ~~v~~i~~~~~~~~l~~~~~-d~~i~~wd~~~-~~~---~~~~~~~~~----------~~~~~~~~~~~~~~~~--~~~~ 193 (343)
.+-..+++++++++++++.. .|.|.++-++. |.. +....+... +....+.|+++++++. ....
T Consensus 89 ~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dr 168 (346)
T COG2706 89 SPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDR 168 (346)
T ss_pred CCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCce
Confidence 34488999999999888875 58899999866 332 122233222 6778999999999998 7888
Q ss_pred EEEEEcccceeEEEe----cCCcceEEeeecCC-CeEEEE-eCCCcEEEEECCCC-ceeEEec------cc--ccccEEE
Q 019326 194 VGIHQAEDAKLLCEL----DGKKRILCAAPGEN-GVLFTG-GEDRSITAWDTNSG-KVAYCIE------DA--HSARVKG 258 (343)
Q Consensus 194 i~~~d~~~~~~~~~~----~~~~~i~~~~~~~~-~~l~~~-~~dg~i~i~d~~~~-~~~~~~~------~~--h~~~v~~ 258 (343)
|.+|++..+++...- +.......+.|+++ ++.+.. --+++|.+|..... ..+..++ .. -.....+
T Consensus 169 i~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aa 248 (346)
T COG2706 169 IFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAA 248 (346)
T ss_pred EEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeE
Confidence 999999977654432 35566788999964 555444 45899999998763 2333333 11 1235567
Q ss_pred EEEEecCCCCCCCCCCeEEEEEcC-CCcEEEEeccCccccCCCcccccccccc-eeEEEcCCCCceeccccCCC
Q 019326 259 IVVLTKNDGGSTAENPYLVASASS-DGVICVWDVRMAIKEKPLPLAEAKTNSR-LTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~-i~~~~~s~~~~~~~~~~~~~ 330 (343)
|.++++++ +|.++.. ...|-+|.+...... ...+......+. ...+.+++.++++++...+.
T Consensus 249 Ihis~dGr---------FLYasNRg~dsI~~f~V~~~~g~-L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~s 312 (346)
T COG2706 249 IHISPDGR---------FLYASNRGHDSIAVFSVDPDGGK-LELVGITPTEGQFPRDFNINPSGRFLIAANQKS 312 (346)
T ss_pred EEECCCCC---------EEEEecCCCCeEEEEEEcCCCCE-EEEEEEeccCCcCCccceeCCCCCEEEEEccCC
Confidence 77777776 7777642 347888888754211 111112222333 67788999999888776655
No 278
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.24 E-value=1.4e-08 Score=87.84 Aligned_cols=215 Identities=10% Similarity=0.042 Sum_probs=128.4
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCce--E-EEeeCCC--eEEEEECCCcceeeeeeeccccEEEE
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRN--L-FSTSADG--FVSIFDADPFVLLTSVKVHKKGVNDL 136 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~--l-~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~i 136 (343)
..|.+.|.+.+... .+... ......=+|+|++ +. + ++...+| .|.+.++.+++... +....+.....
T Consensus 165 ~~l~~~d~dG~~~~-~lt~~-~~~~~sP~wSPDG-----~~~~~~y~S~~~g~~~I~~~~l~~g~~~~-lt~~~g~~~~p 236 (428)
T PRK01029 165 GELWSVDYDGQNLR-PLTQE-HSLSITPTWMHIG-----SGFPYLYVSYKLGVPKIFLGSLENPAGKK-ILALQGNQLMP 236 (428)
T ss_pred ceEEEEcCCCCCce-EcccC-CCCcccceEccCC-----CceEEEEEEccCCCceEEEEECCCCCceE-eecCCCCccce
Confidence 35777777655443 34334 4566777999998 43 2 2444443 58888888765433 23244455678
Q ss_pred EEecCCCEEEEEeC-----CCeEEEEEccCC---ceeEEEEcC-CcceEEEEeCCCCEEEEE--eCCcEEEE--Eccc-c
Q 019326 137 AVHHSGKLALTVGR-----DDCLAMVNLVRG---RRSFYHKIG-KEASLIKFDGSGEKFFMV--TEEKVGIH--QAED-A 202 (343)
Q Consensus 137 ~~~~~~~~l~~~~~-----d~~i~~wd~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~i~~~--d~~~-~ 202 (343)
+|+|||+.|+..+. +-.+..|++..+ +........ ......+|+|+|+.++.. .++...+| ++.. +
T Consensus 237 ~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g 316 (428)
T PRK01029 237 TFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEG 316 (428)
T ss_pred EECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccc
Confidence 99999988876653 223444676653 222222222 234568999999988776 35544455 4432 2
Q ss_pred eeEEEec-CCcceEEeeecC-CCeEEEEeC-C--CcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEE
Q 019326 203 KLLCELD-GKKRILCAAPGE-NGVLFTGGE-D--RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLV 277 (343)
Q Consensus 203 ~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~-d--g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l 277 (343)
.....+. ....+....|++ ++.|+..+. + ..|.+||+.+++.. .+. .....+....|+|++. .|
T Consensus 317 ~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~-~Lt-~~~~~~~~p~wSpDG~---------~L 385 (428)
T PRK01029 317 QSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY-QLT-TSPENKESPSWAIDSL---------HL 385 (428)
T ss_pred cceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE-Ecc-CCCCCccceEECCCCC---------EE
Confidence 2233333 334566778884 566655443 2 46999999988754 343 2334567788888876 66
Q ss_pred EE-EcC--CCcEEEEeccCcc
Q 019326 278 AS-ASS--DGVICVWDVRMAI 295 (343)
Q Consensus 278 ~s-~~~--dg~i~vwd~~~~~ 295 (343)
+. +.. ...|.+||+..+.
T Consensus 386 ~f~~~~~g~~~L~~vdl~~g~ 406 (428)
T PRK01029 386 VYSAGNSNESELYLISLITKK 406 (428)
T ss_pred EEEECCCCCceEEEEECCCCC
Confidence 54 333 3568888887653
No 279
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.24 E-value=4.2e-07 Score=73.00 Aligned_cols=203 Identities=15% Similarity=0.136 Sum_probs=136.4
Q ss_pred EEEec---CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEe-CCCCCCCCceEEEeeCCCeEEEEECCCcce
Q 019326 47 TVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFY-TPQNLSVPRNLFSTSADGFVSIFDADPFVL 122 (343)
Q Consensus 47 ~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 122 (343)
+.+|. +.++++--..+.|..|+..+++.. .+... . ...+++. +++ .|+.+...+ +.++|..+++.
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~-~~~~~--~-~~G~~~~~~~g------~l~v~~~~~-~~~~d~~~g~~ 72 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVE-VIDLP--G-PNGMAFDRPDG------RLYVADSGG-IAVVDPDTGKV 72 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEE-EEESS--S-EEEEEEECTTS------EEEEEETTC-EEEEETTTTEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEE-EEecC--C-CceEEEEccCC------EEEEEEcCc-eEEEecCCCcE
Confidence 35565 556666667899999999877543 33333 2 6777777 555 556666554 45559888754
Q ss_pred eeeeee-----ccccEEEEEEecCCCEEEEEeCC--------CeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE
Q 019326 123 LTSVKV-----HKKGVNDLAVHHSGKLALTVGRD--------DCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV 189 (343)
Q Consensus 123 ~~~~~~-----~~~~v~~i~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (343)
...... .....+.+++.|+|++.++.... |.|..++.. ++.......-...+.++|+|+++.++++
T Consensus 73 ~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ 151 (246)
T PF08450_consen 73 TVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVA 151 (246)
T ss_dssp EEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEE
T ss_pred EEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeec
Confidence 444332 23578999999999977776643 567777776 5544444445677899999999988877
Q ss_pred --eCCcEEEEEcccce-------eEEEecCC-cceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEE
Q 019326 190 --TEEKVGIHQAEDAK-------LLCELDGK-KRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKG 258 (343)
Q Consensus 190 --~~~~i~~~d~~~~~-------~~~~~~~~-~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~ 258 (343)
..+.|..|++.... ....+... ...-.+++. ++++.++....+.|.++|.. |+.+..+. .....+++
T Consensus 152 ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~-~p~~~~t~ 229 (246)
T PF08450_consen 152 DSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIE-LPVPRPTN 229 (246)
T ss_dssp ETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE--SSSSEEE
T ss_pred ccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEc-CCCCCEEE
Confidence 67788888886322 12222222 247778887 45666666678999999988 99888888 44558999
Q ss_pred EEEEe
Q 019326 259 IVVLT 263 (343)
Q Consensus 259 ~~~~~ 263 (343)
++|..
T Consensus 230 ~~fgg 234 (246)
T PF08450_consen 230 CAFGG 234 (246)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 99953
No 280
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.23 E-value=5.9e-08 Score=90.93 Aligned_cols=302 Identities=13% Similarity=0.070 Sum_probs=186.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcC---------
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLS--------- 70 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~--------- 70 (343)
.|+.+..+|.|.+...... ......+.+..+ ...|.+++|+ ++.|+..+.++++.+-+-+
T Consensus 89 ~l~~~~~~Gdi~~~~~~~~------~~~~~~E~VG~v---d~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l 159 (928)
T PF04762_consen 89 SLCIALASGDIILVREDPD------PDEDEIEIVGSV---DSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPL 159 (928)
T ss_pred cEEEEECCceEEEEEccCC------CCCceeEEEEEE---cCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeec
Confidence 4788889999988833220 111223444433 5689999999 7788888888888775432
Q ss_pred ------C--------CeeeeEecc------------------------CCCCCeEEEEEeCCCCCCCCceEEEeeC---C
Q 019326 71 ------T--------SSSLGAIHH------------------------HESSSVTSLAFYTPQNLSVPRNLFSTSA---D 109 (343)
Q Consensus 71 ------~--------~~~~~~~~~------------------------~~~~~v~~l~~~~~~~~~~~~~l~s~~~---d 109 (343)
. |+....|++ . ...-..++|..|| .++++.+. .
T Consensus 160 ~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~-dd~~~~ISWRGDG-----~yFAVss~~~~~ 233 (928)
T PF04762_consen 160 DSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSW-DDGRVRISWRGDG-----EYFAVSSVEPET 233 (928)
T ss_pred CccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCcccc-CCCceEEEECCCC-----cEEEEEEEEcCC
Confidence 0 111111111 1 2344578899998 78888775 2
Q ss_pred ---CeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC---CCeEEEEEccCCceeEEEEc-----CCcceEEE
Q 019326 110 ---GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR---DDCLAMVNLVRGRRSFYHKI-----GKEASLIK 178 (343)
Q Consensus 110 ---g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~-----~~~~~~~~ 178 (343)
..++||+-+ |++..+-+.-.+--.+++|.|.|+++++.-. ...|.+|. ++|-.-..+.. ...+..+.
T Consensus 234 ~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~ 311 (928)
T PF04762_consen 234 GSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELA 311 (928)
T ss_pred CceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEE
Confidence 479999976 4544444433344457899999999988765 34566776 34444444433 35688899
Q ss_pred EeCCCCEEEEEeCCcEEEEEccccee--EEEec--CCcceEEeeecC--CCeEEEEeCCCcEEEEECC----CCc-----
Q 019326 179 FDGSGEKFFMVTEEKVGIHQAEDAKL--LCELD--GKKRILCAAPGE--NGVLFTGGEDRSITAWDTN----SGK----- 243 (343)
Q Consensus 179 ~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~--~~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~----~~~----- 243 (343)
|++++..|++.....|.+|-..+..- .+.+. ....+..+.|++ ...|...+.+|.+..+++. .+.
T Consensus 312 Wn~ds~iLAv~~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~ 391 (928)
T PF04762_consen 312 WNSDSEILAVWLEDRVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPN 391 (928)
T ss_pred ECCCCCEEEEEecCCceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCcc
Confidence 99999999999666699999887652 22222 334455688884 3456666666666555432 110
Q ss_pred ---eeEEec----------------------ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcccc-
Q 019326 244 ---VAYCIE----------------------DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKE- 297 (343)
Q Consensus 244 ---~~~~~~----------------------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~- 297 (343)
.+..+. -....+|.+++|++.+. .+++-..||.|.+|........
T Consensus 392 D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~---------~~avl~~d~~l~~~~~~~~~~~~ 462 (928)
T PF04762_consen 392 DNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNS---------RFAVLTSDGSLSIYEWDLKNMWS 462 (928)
T ss_pred CceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCC---------eEEEEECCCCEEEEEecCCCccc
Confidence 011111 11356899999999876 6999999999999986543211
Q ss_pred --CCCccccc-----------ccccceeEEEcCCCCceeccccCC
Q 019326 298 --KPLPLAEA-----------KTNSRLTCLAGSSTKSFKRPQIGD 329 (343)
Q Consensus 298 --~~~~~~~~-----------~~~~~i~~~~~s~~~~~~~~~~~~ 329 (343)
.+.....+ .....+..++|..+..+.+.....
T Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (928)
T PF04762_consen 463 VKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSD 507 (928)
T ss_pred ccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecC
Confidence 11111111 123456777877777665554443
No 281
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.22 E-value=1.4e-08 Score=85.21 Aligned_cols=230 Identities=15% Similarity=0.154 Sum_probs=151.6
Q ss_pred EEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEE-----eeCCCeEEEEECCC
Q 019326 46 TTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFS-----TSADGFVSIFDADP 119 (343)
Q Consensus 46 ~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s-----~~~dg~i~iwd~~~ 119 (343)
.+..|+ .+.++.--..+.+++|++.+.+.+. -.-| ...|+.+.++|... +..+++ .+.-+.|+||....
T Consensus 129 W~~qfs~dEsl~arlv~nev~f~~~~~f~~~~-~kl~-~~~i~~f~lSpgp~---~~~vAvyvPe~kGaPa~vri~~~~~ 203 (566)
T KOG2315|consen 129 WVPQFSIDESLAARLVSNEVQFYDLGSFKTIQ-HKLS-VSGITMLSLSPGPE---PPFVAVYVPEKKGAPASVRIYKYPE 203 (566)
T ss_pred cccccccchhhhhhhhcceEEEEecCCcccee-eeee-ccceeeEEecCCCC---CceEEEEccCCCCCCcEEEEecccc
Confidence 366777 5555555556789999988743222 1224 67899999998842 133332 34456899998752
Q ss_pred cceeeee---eeccccEEEEEEecCCCE-EEEEe--C---------CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCC
Q 019326 120 FVLLTSV---KVHKKGVNDLAVHHSGKL-ALTVG--R---------DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGE 184 (343)
Q Consensus 120 ~~~~~~~---~~~~~~v~~i~~~~~~~~-l~~~~--~---------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (343)
...-..+ .-....=..+.|++-|.- |+.++ - +.++++.++....+.....-.++|.++.|+|+++
T Consensus 204 ~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~ 283 (566)
T KOG2315|consen 204 EGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGR 283 (566)
T ss_pred ccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCC
Confidence 2111111 011122234778876642 22222 2 3468888887555555666679999999999999
Q ss_pred EEEEE---eCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEeC---CCcEEEEECCCCceeEEecccccccEE
Q 019326 185 KFFMV---TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGGE---DRSITAWDTNSGKVAYCIEDAHSARVK 257 (343)
Q Consensus 185 ~~~~~---~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~h~~~v~ 257 (343)
.|+++ .-..+.+||++- .++..+ ..++-+++.|++ +++++.++- .|.|.+||+.+.+.+..+. +. .-+
T Consensus 284 EF~VvyGfMPAkvtifnlr~-~~v~df-~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~-a~--~tt 358 (566)
T KOG2315|consen 284 EFAVVYGFMPAKVTIFNLRG-KPVFDF-PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFK-AA--NTT 358 (566)
T ss_pred EEEEEEecccceEEEEcCCC-CEeEeC-CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccc-cC--Cce
Confidence 98888 567899999753 444443 456677888884 676666654 4889999999988888887 33 234
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEcC------CCcEEEEeccCc
Q 019326 258 GIVVLTKNDGGSTAENPYLVASASS------DGVICVWDVRMA 294 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~ 294 (343)
-..|+|+++ +++|+.. |+.++||++...
T Consensus 359 ~~eW~PdGe---------~flTATTaPRlrvdNg~KiwhytG~ 392 (566)
T KOG2315|consen 359 VFEWSPDGE---------YFLTATTAPRLRVDNGIKIWHYTGS 392 (566)
T ss_pred EEEEcCCCc---------EEEEEeccccEEecCCeEEEEecCc
Confidence 568888887 8888864 688999999754
No 282
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=99.21 E-value=8.9e-11 Score=92.41 Aligned_cols=164 Identities=14% Similarity=0.163 Sum_probs=124.8
Q ss_pred EEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc-----eeEEEecCCcceEEeee
Q 019326 146 LTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA-----KLLCELDGKKRILCAAP 219 (343)
Q Consensus 146 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~-----~~~~~~~~~~~i~~~~~ 219 (343)
++.+.+..+.+-|++++-..... ....|-++.|...++.++.+ .+|.|..+|++.. .+...+-|...|+++..
T Consensus 228 fs~G~sqqv~L~nvetg~~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~ 306 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQI 306 (425)
T ss_pred ecccccceeEEEEeecccccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhh
Confidence 56667788999999988654443 66788889999989999988 9999999999864 45667779999999886
Q ss_pred c--CCCeEEEEeCCCcEEEEECCCCce---eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 220 G--ENGVLFTGGEDRSITAWDTNSGKV---AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 220 ~--~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
- .+.+|++.+.+|+|.+||.+--+. +.+++ +|...-.-+-++-+..++ .+++++.|-..|||.++.+
T Consensus 307 Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYe-GHvN~~a~l~~~v~~eeg-------~I~s~GdDcytRiWsl~~g 378 (425)
T KOG2695|consen 307 LQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYE-GHVNLSAYLPAHVKEEEG-------SIFSVGDDCYTRIWSLDSG 378 (425)
T ss_pred hccccceEeeccCcCceeEeeehhhhcccceeeee-cccccccccccccccccc-------eEEEccCeeEEEEEecccC
Confidence 5 567899999999999999987666 88888 886655444444443333 8899999999999999988
Q ss_pred cccCCCcccccccccceeEEEcCC
Q 019326 295 IKEKPLPLAEAKTNSRLTCLAGSS 318 (343)
Q Consensus 295 ~~~~~~~~~~~~~~~~i~~~~~s~ 318 (343)
......|.........+.++++..
T Consensus 379 hLl~tipf~~s~~e~d~~sv~~~s 402 (425)
T KOG2695|consen 379 HLLCTIPFPYSASEVDIPSVAFDS 402 (425)
T ss_pred ceeeccCCCCccccccccceehhc
Confidence 655555544444343466666643
No 283
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.20 E-value=6.2e-08 Score=80.01 Aligned_cols=143 Identities=9% Similarity=0.068 Sum_probs=113.8
Q ss_pred CCCCCeEEEEec--CceEEEeeCCC-eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEE
Q 019326 40 AHLSPITTVAVS--GTAAASGGTDD-TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFD 116 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 116 (343)
+|.+.|.-..+. ++-++.|..|| .+-|+|..+++...... . -+.|.++..++++ ++++.+.....+.+.|
T Consensus 357 ~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~-~-lg~I~av~vs~dG-----K~~vvaNdr~el~vid 429 (668)
T COG4946 357 GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEK-D-LGNIEAVKVSPDG-----KKVVVANDRFELWVID 429 (668)
T ss_pred CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeC-C-ccceEEEEEcCCC-----cEEEEEcCceEEEEEE
Confidence 577788887777 77899999999 89999999876554444 4 5899999999999 7899998889999999
Q ss_pred CCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCC----eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE
Q 019326 117 ADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD----CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV 189 (343)
Q Consensus 117 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (343)
++++.....-+...+-|+.++|+|++++++-+--+| .|+++|+..++..........-.+-+|.|+++++...
T Consensus 430 idngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfL 506 (668)
T COG4946 430 IDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFL 506 (668)
T ss_pred ecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEEEE
Confidence 999876655566677899999999999999876654 5899999888765444443444556788888877655
No 284
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.19 E-value=1.6e-07 Score=88.17 Aligned_cols=271 Identities=14% Similarity=0.089 Sum_probs=167.5
Q ss_pred CCCeEEEEec--CceEEEeeCCCeEEEE----EcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEE
Q 019326 42 LSPITTVAVS--GTAAASGGTDDTIHLY----DLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIF 115 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~dg~i~iw----d~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 115 (343)
.+.|.++.|- .+.++.+..+|.|.+. +..+.. .+.-+.-...|.+++|+|+. ..|+..+.++++.+.
T Consensus 75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~--~E~VG~vd~GI~a~~WSPD~-----Ella~vT~~~~l~~m 147 (928)
T PF04762_consen 75 NDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE--IEIVGSVDSGILAASWSPDE-----ELLALVTGEGNLLLM 147 (928)
T ss_pred CCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce--eEEEEEEcCcEEEEEECCCc-----CEEEEEeCCCEEEEE
Confidence 4678888887 6678888889999998 444332 12222226789999999999 899999999988876
Q ss_pred ECC---------------C--------cceeeeeee------------------------ccccEEEEEEecCCCEEEEE
Q 019326 116 DAD---------------P--------FVLLTSVKV------------------------HKKGVNDLAVHHSGKLALTV 148 (343)
Q Consensus 116 d~~---------------~--------~~~~~~~~~------------------------~~~~v~~i~~~~~~~~l~~~ 148 (343)
... . |+.-.+|.| +...-..|+|-.||.++++.
T Consensus 148 t~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVs 227 (928)
T PF04762_consen 148 TRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVS 227 (928)
T ss_pred eccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEE
Confidence 421 0 011111110 22244568899999999988
Q ss_pred eC---C---CeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-e---CCcEEEEEcccceeEEEec-----CCc
Q 019326 149 GR---D---DCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-T---EEKVGIHQAEDAKLLCELD-----GKK 212 (343)
Q Consensus 149 ~~---d---~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~---~~~i~~~d~~~~~~~~~~~-----~~~ 212 (343)
+. . ..+++|+-+ |....... ..+--..++|.|.|+.+++. . ...|.+|. ++|-.-..+. ...
T Consensus 228 s~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~ 305 (928)
T PF04762_consen 228 SVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEE 305 (928)
T ss_pred EEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCc
Confidence 75 2 578999854 54332222 22334569999999999999 2 23344454 3444333333 356
Q ss_pred ceEEeeec-CCCeEEEEeCCCcEEEEECCCCc--eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 213 RILCAAPG-ENGVLFTGGEDRSITAWDTNSGK--VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 213 ~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
.+..+.|+ ++..|+..-.| .|.+|-..+.. ..+++.......+..+.|+|.... .|...+.+|.+..+
T Consensus 306 ~v~~l~Wn~ds~iLAv~~~~-~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~--------~L~v~t~~g~~~~~ 376 (928)
T PF04762_consen 306 KVIELAWNSDSEILAVWLED-RVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPL--------RLHVLTSNGQYEIY 376 (928)
T ss_pred eeeEEEECCCCCEEEEEecC-CceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCC--------EEEEEecCCcEEEE
Confidence 79999998 45677765544 49999887654 233333223344555788876542 34444444444332
Q ss_pred e-------------------------------ccCccccCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 290 D-------------------------------VRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 290 d-------------------------------~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
+ ++......|+.........+|.+++|++++.-++.-..++
T Consensus 377 ~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~ 448 (928)
T PF04762_consen 377 DFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDG 448 (928)
T ss_pred EEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCC
Confidence 2 2222233334445566678899999998886555555555
No 285
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.18 E-value=8.8e-08 Score=79.70 Aligned_cols=256 Identities=11% Similarity=0.110 Sum_probs=162.1
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCC--eE-EEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCC
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSP--IT-TVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHES 83 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--v~-~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 83 (343)
++.+.+||+.+ ...+..+.+...+ .. -+.|+ ..++|-. ....+.|+++...-....+..-..
T Consensus 107 ~n~~~vwd~~s------------g~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~t~n~~~~p~~~lr~ 173 (561)
T COG5354 107 KNNVFVWDIAS------------GMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEITDNIEEHPFKNLRP 173 (561)
T ss_pred cCceeEEeccC------------ceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEecCCccccCchhhccc
Confidence 44688999887 3445555554444 33 45565 4444433 345699999722222222222213
Q ss_pred CCeEEEEEeCCCCCCCCceEEE-----eeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC--------
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFS-----TSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-------- 150 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s-----~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-------- 150 (343)
..|....|+|.++. ..|+. .+..+++++|.+..+..+.+-......=..+.|++.|++|++--.
T Consensus 174 ~gi~dFsisP~~n~---~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKs 250 (561)
T COG5354 174 VGILDFSISPEGNH---DELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKS 250 (561)
T ss_pred cceeeEEecCCCCC---ceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccc
Confidence 67888899998532 33332 355789999999766655554433333356888888877654321
Q ss_pred ---CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE---eCCcEEEEEcccceeEEEecCCcceEEeeecC-CC
Q 019326 151 ---DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV---TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NG 223 (343)
Q Consensus 151 ---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~ 223 (343)
...+++++++...........++|...+|.|.++.+++. ....+.++|++.. +...-.+..-+.+.|++ .+
T Consensus 251 yfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l~~~~Pe~~rNT~~fsp~~r 328 (561)
T COG5354 251 YFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN--LRFYFPEQKRNTIFFSPHER 328 (561)
T ss_pred eeccceEEEEeecccccceeccccccceeeeecccCCceeEEecccccceeecccccc--eEEecCCcccccccccCccc
Confidence 356888888755544444667999999999999988877 4778889998876 33333444445566664 56
Q ss_pred eEEEEeC---CCcEEEEECCCCceeE-EecccccccEEEEEEEecCCCCCCCCCCeEEEEEc------CCCcEEEEeccC
Q 019326 224 VLFTGGE---DRSITAWDTNSGKVAY-CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS------SDGVICVWDVRM 293 (343)
Q Consensus 224 ~l~~~~~---dg~i~i~d~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~------~dg~i~vwd~~~ 293 (343)
+++.++- .|.|-+||......+. .+. +. ..+-+.|+|+++ ++.+.. .|..|.|||+..
T Consensus 329 ~il~agF~nl~gni~i~~~~~rf~~~~~~~-~~--n~s~~~wspd~q---------F~~~~~ts~k~~~Dn~i~l~~v~g 396 (561)
T COG5354 329 YILFAGFDNLQGNIEIFDPAGRFKVAGAFN-GL--NTSYCDWSPDGQ---------FYDTDTTSEKLRVDNSIKLWDVYG 396 (561)
T ss_pred EEEEecCCccccceEEeccCCceEEEEEee-cC--CceEeeccCCce---------EEEecCCCcccccCcceEEEEecC
Confidence 7776554 4789999987655444 444 22 233456777776 666653 478899999986
Q ss_pred c
Q 019326 294 A 294 (343)
Q Consensus 294 ~ 294 (343)
.
T Consensus 397 ~ 397 (561)
T COG5354 397 A 397 (561)
T ss_pred c
Confidence 5
No 286
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.17 E-value=1.8e-07 Score=89.41 Aligned_cols=195 Identities=9% Similarity=0.064 Sum_probs=129.4
Q ss_pred CeEEEEec--CceEEEee-CCCeEEEEEcCCCeeeeEeccC----------------CCCCeEEEEEeCCCCCCCCceEE
Q 019326 44 PITTVAVS--GTAAASGG-TDDTIHLYDLSTSSSLGAIHHH----------------ESSSVTSLAFYTPQNLSVPRNLF 104 (343)
Q Consensus 44 ~v~~l~~~--~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~----------------~~~~v~~l~~~~~~~~~~~~~l~ 104 (343)
....++++ ++.|+.+. ..+.|+++|..++. +..+.+. .-..-..++++|++. ..++
T Consensus 625 ~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g----~LyV 699 (1057)
T PLN02919 625 RPQGLAYNAKKNLLYVADTENHALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNE----KVYI 699 (1057)
T ss_pred CCcEEEEeCCCCEEEEEeCCCceEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCC----eEEE
Confidence 35778887 56565554 45779999987764 3333110 001345789999541 5677
Q ss_pred EeeCCCeEEEEECCCcceeeeeeec---------------cccEEEEEEecCCC-EEEEEeCCCeEEEEEccCCceeEEE
Q 019326 105 STSADGFVSIFDADPFVLLTSVKVH---------------KKGVNDLAVHHSGK-LALTVGRDDCLAMVNLVRGRRSFYH 168 (343)
Q Consensus 105 s~~~dg~i~iwd~~~~~~~~~~~~~---------------~~~v~~i~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~ 168 (343)
+...++.|++||..++... .+.+. -.....|+++|+++ ++++-+.++.|++||+.++......
T Consensus 700 ad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~ 778 (1057)
T PLN02919 700 AMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLA 778 (1057)
T ss_pred EECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEE
Confidence 7778899999998775432 22111 12456799999987 4455566799999999876532111
Q ss_pred E-----------c-----------CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecC--------------C
Q 019326 169 K-----------I-----------GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG--------------K 211 (343)
Q Consensus 169 ~-----------~-----------~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~--------------~ 211 (343)
. . -..+..++++++|..+++- .++.|++||..++........ -
T Consensus 779 gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l 858 (1057)
T PLN02919 779 GGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQL 858 (1057)
T ss_pred ecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCccccccc
Confidence 0 0 1134678999999877666 889999999988766543321 1
Q ss_pred cceEEeeec-CCCeEEEEeCCCcEEEEECCCCce
Q 019326 212 KRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKV 244 (343)
Q Consensus 212 ~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~ 244 (343)
.....++++ +++++++.+.++.|++||+.+++.
T Consensus 859 ~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 859 SEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 235667776 456777778899999999998764
No 287
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=99.17 E-value=1.7e-07 Score=82.76 Aligned_cols=266 Identities=12% Similarity=0.116 Sum_probs=161.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEe-cCCCCCe--EEEEecC-ceEEEeeCCCeEEEEEcCCCeeeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSY-PAHLSPI--TTVAVSG-TAAASGGTDDTIHLYDLSTSSSLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v--~~l~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~ 77 (343)
++++++.++.|+.+|..+. +..-....... ..+...+ ..++..+ ..++.++.+|.|..+|.++|+.+..
T Consensus 63 ~vy~~~~~g~l~AlD~~tG-------~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~ 135 (488)
T cd00216 63 DMYFTTSHSALFALDAATG-------KVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWK 135 (488)
T ss_pred EEEEeCCCCcEEEEECCCC-------hhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeee
Confidence 4677888899999998762 22111111000 0000111 1123334 7888999999999999999999988
Q ss_pred eccCCCCC-----e-EEEEEeCCCCCCCCceEEEee---------CCCeEEEEECCCcceeeeeeeccc-----------
Q 019326 78 IHHHESSS-----V-TSLAFYTPQNLSVPRNLFSTS---------ADGFVSIFDADPFVLLTSVKVHKK----------- 131 (343)
Q Consensus 78 ~~~~~~~~-----v-~~l~~~~~~~~~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~----------- 131 (343)
+... ... + .+..+.. + .++.++ .+|.+..+|..+++.+..++....
T Consensus 136 ~~~~-~~~~~~~~i~ssP~v~~-~------~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~ 207 (488)
T cd00216 136 FGNN-DQVPPGYTMTGAPTIVK-K------LVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPD 207 (488)
T ss_pred ecCC-CCcCcceEecCCCEEEC-C------EEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCC
Confidence 8654 221 1 1112221 2 455553 368899999999998887764211
Q ss_pred ---------cE-EEEEEecCCCEEEEEeCCC------------------eEEEEEccCCceeEEEEcCCc-c------eE
Q 019326 132 ---------GV-NDLAVHHSGKLALTVGRDD------------------CLAMVNLVRGRRSFYHKIGKE-A------SL 176 (343)
Q Consensus 132 ---------~v-~~i~~~~~~~~l~~~~~d~------------------~i~~wd~~~~~~~~~~~~~~~-~------~~ 176 (343)
.+ ...++.+.+..++.++.++ .|.-+|..+++.......... . ..
T Consensus 208 ~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~ 287 (488)
T cd00216 208 RQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQ 287 (488)
T ss_pred cceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCC
Confidence 01 1234455566777777665 799999999998877654321 1 11
Q ss_pred EEEe----CCCC---EEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEE------------------eC
Q 019326 177 IKFD----GSGE---KFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTG------------------GE 230 (343)
Q Consensus 177 ~~~~----~~~~---~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~------------------~~ 230 (343)
..+. -++. .++++ .++.+..+|.++++.+....... ..+..++ +.++.+ ..
T Consensus 288 p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~--~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~ 364 (488)
T cd00216 288 PSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE--QPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPG 364 (488)
T ss_pred CeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec--cccccCC-ceEEEccccccccCcccccCCCCCCC
Confidence 1111 1233 45555 78999999999999988765221 1122223 333332 24
Q ss_pred CCcEEEEECCCCceeEEeccc-cc------ccE--EEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc
Q 019326 231 DRSITAWDTNSGKVAYCIEDA-HS------ARV--KGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK 296 (343)
Q Consensus 231 dg~i~i~d~~~~~~~~~~~~~-h~------~~v--~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 296 (343)
+|.+.-.|..+|+.+.+...+ +. .+. ..+.. .+. .|+.++.||.|+.+|.++++.
T Consensus 365 ~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~---------~v~~g~~dG~l~ald~~tG~~ 428 (488)
T cd00216 365 KGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGN---------LVFAGAADGYFRAFDATTGKE 428 (488)
T ss_pred ceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEe--cCC---------eEEEECCCCeEEEEECCCCce
Confidence 688999999999998887622 00 111 11222 222 888999999999999999863
No 288
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.16 E-value=2.2e-08 Score=84.04 Aligned_cols=263 Identities=13% Similarity=0.042 Sum_probs=171.9
Q ss_pred eEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC-----------Ce
Q 019326 45 ITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD-----------GF 111 (343)
Q Consensus 45 v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d-----------g~ 111 (343)
=+-+.|+ |.+|+|--..| |.+|--.+-..++.|. | ..|.-+.|+|+. ++|++=+.. ..
T Consensus 213 etyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-H--p~Vq~idfSP~E-----kYLVT~s~~p~~~~~~d~e~~~ 283 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-H--PGVQFIDFSPNE-----KYLVTYSPEPIIVEEDDNEGQQ 283 (698)
T ss_pred eeeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-C--CCceeeecCCcc-----ceEEEecCCccccCcccCCCce
Confidence 3457888 89999988877 8899766655565554 4 578999999999 899987642 47
Q ss_pred EEEEECCCcceeeeeeeccc--cE-EEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC-CcceEEEEeCCCCEEE
Q 019326 112 VSIFDADPFVLLTSVKVHKK--GV-NDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG-KEASLIKFDGSGEKFF 187 (343)
Q Consensus 112 i~iwd~~~~~~~~~~~~~~~--~v-~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 187 (343)
+.|||+.+|...+.+....+ .+ .-..|+.|+++++.-.. ..|.+|+..+...+-..... ..|....|+|.++.|+
T Consensus 284 l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llA 362 (698)
T KOG2314|consen 284 LIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLA 362 (698)
T ss_pred EEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEE
Confidence 99999999999888876332 22 33679999999987766 57999987664433322332 5577789999988887
Q ss_pred EE--e----CCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEE----------eCCCcEEEEECCCCceeEEec
Q 019326 188 MV--T----EEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTG----------GEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 188 ~~--~----~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~----------~~dg~i~i~d~~~~~~~~~~~ 249 (343)
-- . -..+.+..+.+.+.++... ++-.=..+.|- .+.+|+.- +.-..+.|+.++........-
T Consensus 363 Ywtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~v 442 (698)
T KOG2314|consen 363 YWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVV 442 (698)
T ss_pred EEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceee
Confidence 66 2 1246677777776666544 21111122232 34444321 222246677777655333222
Q ss_pred ccccccEEEEEEEecCCCCCCCCCCeEEEEEc-C--CCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccc
Q 019326 250 DAHSARVKGIVVLTKNDGGSTAENPYLVASAS-S--DGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQ 326 (343)
Q Consensus 250 ~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~-~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~ 326 (343)
.-...|...+|-|.++ .+++-+ . ..++.+|.+++. ...+..+..+.. ...+.+-|+|.|++++.+
T Consensus 443 -elke~vi~FaWEP~gd---------kF~vi~g~~~k~tvsfY~~e~~-~~~~~lVk~~dk-~~~N~vfwsPkG~fvvva 510 (698)
T KOG2314|consen 443 -ELKESVIAFAWEPHGD---------KFAVISGNTVKNTVSFYAVETN-IKKPSLVKELDK-KFANTVFWSPKGRFVVVA 510 (698)
T ss_pred -ecchheeeeeeccCCC---------eEEEEEccccccceeEEEeecC-CCchhhhhhhcc-cccceEEEcCCCcEEEEE
Confidence 3778899999999887 444332 2 357999999842 112223333333 347789999999998876
Q ss_pred cCC
Q 019326 327 IGD 329 (343)
Q Consensus 327 ~~~ 329 (343)
.--
T Consensus 511 ~l~ 513 (698)
T KOG2314|consen 511 ALV 513 (698)
T ss_pred Eec
Confidence 543
No 289
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.16 E-value=1.3e-07 Score=78.69 Aligned_cols=266 Identities=14% Similarity=0.158 Sum_probs=174.0
Q ss_pred CCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC--------
Q 019326 41 HLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG-------- 110 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg-------- 110 (343)
..-++..+.++ |.+|++....| |.+|.-.....+..+. | ..|..+.|+|++ ++|.+=+..+
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~~-~--~~V~~~~fSP~~-----kYL~tw~~~pi~~pe~e~ 101 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAKLVRFR-H--PDVKYLDFSPNE-----KYLVTWSREPIIEPEIEI 101 (561)
T ss_pred cCcchhheeecCcchheehhhccc-eEEccccchhheeeee-c--CCceecccCccc-----ceeeeeccCCccChhhcc
Confidence 56678889999 88888877665 9999988776555554 3 679999999999 7888776544
Q ss_pred -------eEEEEECCCcceeeeeeecc---------------------------------------------ccEEEEEE
Q 019326 111 -------FVSIFDADPFVLLTSVKVHK---------------------------------------------KGVNDLAV 138 (343)
Q Consensus 111 -------~i~iwd~~~~~~~~~~~~~~---------------------------------------------~~v~~i~~ 138 (343)
.+.+||+.++..+..+.... ..|....|
T Consensus 102 sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~t~n~~~~p~~~lr~~gi~dFsi 181 (561)
T COG5354 102 SPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEITDNIEEHPFKNLRPVGILDFSI 181 (561)
T ss_pred CCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccCeEEEEecCCccccCchhhccccceeeEEe
Confidence 48999998776554443211 23445555
Q ss_pred ecCC--CEEEE-----EeCCCeEEEEEccCCceeEEEEcC-CcceEEEEeCCCCEEEEE--e----------CCcEEEEE
Q 019326 139 HHSG--KLALT-----VGRDDCLAMVNLVRGRRSFYHKIG-KEASLIKFDGSGEKFFMV--T----------EEKVGIHQ 198 (343)
Q Consensus 139 ~~~~--~~l~~-----~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~----------~~~i~~~d 198 (343)
+|.+ ..|+. .+..+++++|.+..+..+....+- -.-..+.|.+.|+++++- . ...+++++
T Consensus 182 sP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~ 261 (561)
T COG5354 182 SPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLR 261 (561)
T ss_pred cCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEe
Confidence 5543 22222 233556666666655544443332 334458888999887765 1 24577888
Q ss_pred cccceeEEEecCCcceEEeeecC-CC--eEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCe
Q 019326 199 AEDAKLLCELDGKKRILCAAPGE-NG--VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPY 275 (343)
Q Consensus 199 ~~~~~~~~~~~~~~~i~~~~~~~-~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 275 (343)
++.....-.....++|..++|.+ ++ -+++|-.+-.+.++|++.. ....+ ....=+.+.|+|...
T Consensus 262 ~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~---Pe~~rNT~~fsp~~r--------- 328 (561)
T COG5354 262 ITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYF---PEQKRNTIFFSPHER--------- 328 (561)
T ss_pred ecccccceeccccccceeeeecccCCceeEEecccccceeecccccc-eEEec---CCcccccccccCccc---------
Confidence 77444433335678999999973 33 3444567889999999854 43333 344556678888877
Q ss_pred EEEEEcCC---CcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCC
Q 019326 276 LVASASSD---GVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPK 333 (343)
Q Consensus 276 ~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~ 333 (343)
+++.++-| |.|-+||..... ..+..+. ...-.-..|+||+.|.......++.+
T Consensus 329 ~il~agF~nl~gni~i~~~~~rf----~~~~~~~-~~n~s~~~wspd~qF~~~~~ts~k~~ 384 (561)
T COG5354 329 YILFAGFDNLQGNIEIFDPAGRF----KVAGAFN-GLNTSYCDWSPDGQFYDTDTTSEKLR 384 (561)
T ss_pred EEEEecCCccccceEEeccCCce----EEEEEee-cCCceEeeccCCceEEEecCCCcccc
Confidence 88888766 789999998642 1111121 22344567999999988777766644
No 290
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.14 E-value=4.1e-10 Score=97.27 Aligned_cols=241 Identities=13% Similarity=0.159 Sum_probs=159.7
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCe-eeeEeccCCCC
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSS-SLGAIHHHESS 84 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~ 84 (343)
...-.+|++... -.....+.+.||..+|+.+.|+ ...+++++.|-.+..||+.+.. .+..+..- ..
T Consensus 90 ~qkaiiwnlA~s---------s~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w-~s 159 (1081)
T KOG0309|consen 90 NQKAIIWNLAKS---------SSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSW-RS 159 (1081)
T ss_pred cchhhhhhhhcC---------CccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecc-cc
Confidence 334457777651 1123345667999999999998 6889999999999999998763 44555544 56
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC-cceeeeeeeccccEEEEEEecC-CCEEEEEeCCCeEEEEEccCC
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP-FVLLTSVKVHKKGVNDLAVHHS-GKLALTVGRDDCLAMVNLVRG 162 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~~~d~~i~~wd~~~~ 162 (343)
.-..+.|+-.. ..+.+.+..+.|++||.+. ..++..+++|...|+.++|+.- ...+.+.+.|++|+.||....
T Consensus 160 ~asqVkwnyk~-----p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kS 234 (1081)
T KOG0309|consen 160 AASQVKWNYKD-----PNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKS 234 (1081)
T ss_pred cCceeeecccC-----cchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccc
Confidence 77789998776 4555666777899999965 4678889999999999999764 357889999999999998765
Q ss_pred cee--EEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEeCCCcEEEEEC
Q 019326 163 RRS--FYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGGEDRSITAWDT 239 (343)
Q Consensus 163 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~ 239 (343)
..- .......++..-.+.|-|+-.+ +-+.. ++.+..-..+.....|+.
T Consensus 235 t~e~~~~vtt~~piw~~r~~Pfg~g~~-----------------------------~mp~~G~n~v~~~~c~n~d~e~n~ 285 (1081)
T KOG0309|consen 235 TTESKRTVTTNFPIWRGRYLPFGEGYC-----------------------------IMPMVGGNMVPQLRCENSDLEWNV 285 (1081)
T ss_pred ccccceeccccCcceeccccccCceeE-----------------------------eccccCCeeeeeccccchhhhhcc
Confidence 422 2222233444444444332111 11111 111111112233344554
Q ss_pred CC-CceeEEecccccccEEEEEEEecCC-CCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 240 NS-GKVAYCIEDAHSARVKGIVVLTKND-GGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 240 ~~-~~~~~~~~~~h~~~v~~~~~~~~~~-~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.+ .+++..+. +|...|....|...+. ..........|+|-|.|..+++|-+.+.
T Consensus 286 ~~~~~pVh~F~-GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~~ 341 (1081)
T KOG0309|consen 286 FDLNTPVHTFV-GHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDSQ 341 (1081)
T ss_pred ccCCcceeeec-CcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccHH
Confidence 43 36788898 9999998887765443 1111223348999999999999999865
No 291
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.13 E-value=1.6e-07 Score=77.65 Aligned_cols=149 Identities=11% Similarity=0.077 Sum_probs=117.0
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC-eEEEEECCCcceeeeeeecc
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG-FVSIFDADPFVLLTSVKVHK 130 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~ 130 (343)
|++++..+. |+..+.+...+-.++. ++ ...|.-..+..+. +-++.|..|| .+-|+|.++++ +..+...-
T Consensus 332 Gd~ia~VSR-GkaFi~~~~~~~~iqv--~~-~~~VrY~r~~~~~-----e~~vigt~dgD~l~iyd~~~~e-~kr~e~~l 401 (668)
T COG4946 332 GDYIALVSR-GKAFIMRPWDGYSIQV--GK-KGGVRYRRIQVDP-----EGDVIGTNDGDKLGIYDKDGGE-VKRIEKDL 401 (668)
T ss_pred CcEEEEEec-CcEEEECCCCCeeEEc--CC-CCceEEEEEccCC-----cceEEeccCCceEEEEecCCce-EEEeeCCc
Confidence 888888886 6677777655543322 33 5678888888776 6899999999 99999999876 44555577
Q ss_pred ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-CCcceEEEEeCCCCEEEEE-e----CCcEEEEEccccee
Q 019326 131 KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-GKEASLIKFDGSGEKFFMV-T----EEKVGIHQAEDAKL 204 (343)
Q Consensus 131 ~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~----~~~i~~~d~~~~~~ 204 (343)
+.|.++..+++|+.++++.....+-+.|+.++.....-.. ..-+..+.|+|++++++-+ - ...|++||+.+++.
T Consensus 402 g~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Ki 481 (668)
T COG4946 402 GNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKI 481 (668)
T ss_pred cceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeE
Confidence 8999999999999999999999999999999986544433 3668889999999999988 4 34689999999887
Q ss_pred EEEecC
Q 019326 205 LCELDG 210 (343)
Q Consensus 205 ~~~~~~ 210 (343)
...-..
T Consensus 482 y~vTT~ 487 (668)
T COG4946 482 YDVTTP 487 (668)
T ss_pred EEecCC
Confidence 665543
No 292
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.13 E-value=1.4e-09 Score=87.37 Aligned_cols=154 Identities=14% Similarity=0.143 Sum_probs=109.3
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
|+++..++...++++.... +..++.....+..-...++.+..+ ....-..+....+.+|....+.+ ..+-+
T Consensus 77 lAv~~~~K~~~~f~~~~~~------~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~-~~~lG 149 (390)
T KOG3914|consen 77 VAVATSSKQRAVFDYRENP------KGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRC-EPILG 149 (390)
T ss_pred EEEEeCCCceEEEEEecCC------CcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCc-chhhh
Confidence 5667777777788877621 112333333333344455555555 22333345566677777766443 34557
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeee-eccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK-VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
| -+.++.++|+|++ ++++++..|..|++-....--.+..+- +|+.-|..++..++. .|++++.|+++++||+
T Consensus 150 h-vSml~dVavS~D~-----~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tlr~Wd~ 222 (390)
T KOG3914|consen 150 H-VSMLLDVAVSPDD-----QFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTLRLWDI 222 (390)
T ss_pred h-hhhhheeeecCCC-----CEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcEEEEec
Confidence 7 8999999999999 899999999999998886655555554 699999999998764 5899999999999999
Q ss_pred cCCceeEEEEc
Q 019326 160 VRGRRSFYHKI 170 (343)
Q Consensus 160 ~~~~~~~~~~~ 170 (343)
++++.+.....
T Consensus 223 ~sgk~L~t~dl 233 (390)
T KOG3914|consen 223 TSGKLLDTCDL 233 (390)
T ss_pred ccCCcccccch
Confidence 99997755443
No 293
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.13 E-value=4.1e-07 Score=69.67 Aligned_cols=266 Identities=12% Similarity=0.046 Sum_probs=140.6
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccC
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHH 81 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 81 (343)
++.|+..+.+..-|..+ ++. ..+.+ -...|.+-+.- |++++.|...|.+.+.+.++|...+.+...
T Consensus 26 v~igSHs~~~~avd~~s-------G~~-~We~i-----lg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~ 92 (354)
T KOG4649|consen 26 VVIGSHSGIVIAVDPQS-------GNL-IWEAI-----LGVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVIL 92 (354)
T ss_pred EEEecCCceEEEecCCC-------CcE-Eeehh-----hCceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeeh
Confidence 56667777776666665 211 11111 12344444444 889999999999999999999988888765
Q ss_pred CCCCeEE-EEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecC-------------------
Q 019326 82 ESSSVTS-LAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHS------------------- 141 (343)
Q Consensus 82 ~~~~v~~-l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~------------------- 141 (343)
..|.+ -...+++ ..+..|+.|+..+..|.++..++...+...+.-.+-+..|.
T Consensus 93 --~~vk~~a~~d~~~-----glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~ 165 (354)
T KOG4649|consen 93 --ETVKVRAQCDFDG-----GLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKN 165 (354)
T ss_pred --hhhccceEEcCCC-----ceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccC
Confidence 23322 2234555 68999999999999999887776665422111111111111
Q ss_pred -----------------------CCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceE-EEE-eCCCCEEEEEeC-----
Q 019326 142 -----------------------GKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASL-IKF-DGSGEKFFMVTE----- 191 (343)
Q Consensus 142 -----------------------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~----- 191 (343)
+..+..+.-||.+.-+| ..|+++......+++.. -+. .|..+.+....+
T Consensus 166 ~~~~~~~w~~~~~~PiF~splcv~~sv~i~~VdG~l~~f~-~sG~qvwr~~t~GpIf~~Pc~s~Ps~q~i~~~~~~Cf~~ 244 (354)
T KOG4649|consen 166 PYSSTEFWAATRFGPIFASPLCVGSSVIITTVDGVLTSFD-ESGRQVWRPATKGPIFMEPCESRPSCQQISLENENCFCA 244 (354)
T ss_pred CCCcceehhhhcCCccccCceeccceEEEEEeccEEEEEc-CCCcEEEeecCCCceecccccCCCcceEEEEecCCeEEE
Confidence 11222333455555555 44455444443333221 111 133233333321
Q ss_pred ----CcEEEEEcccceeEEEecCCcceEEeeec-----CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEE
Q 019326 192 ----EKVGIHQAEDAKLLCELDGKKRILCAAPG-----ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVL 262 (343)
Q Consensus 192 ----~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~ 262 (343)
..-.+|..+++......-.+. ....++ ...++..++.||.+.+.-.+ +.+.++. .|.+.+..+.--
T Consensus 245 ~~p~~ghL~w~~~~g~t~~vy~~p~--l~F~~h~~~~S~~~ll~~~s~dgkv~il~~~--~sl~~~~-s~~g~lq~~~~~ 319 (354)
T KOG4649|consen 245 PLPIAGHLLWATQSGTTLHVYLSPK--LRFDLHSPGISYPKLLRRSSGDGKVMILMTS--KSLAEIS-SNGGELQNLEAI 319 (354)
T ss_pred eccccceEEEEecCCcEEEEEeCcc--cceeccCCCCcchhhhhhhcCCCcEEEEEec--ccccccc-cCCCccceEEEe
Confidence 123344444443322221110 012222 24577788899998887544 2344444 455444443322
Q ss_pred ecCCCCCCCC--CCeEEEEEcCCCcEEEEeccCc
Q 019326 263 TKNDGGSTAE--NPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 263 ~~~~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
+-..+...+| -+.+|+.|+.|..++-||+.+.
T Consensus 320 el~~eIFsSPvii~grl~igcRDdYv~cldl~~~ 353 (354)
T KOG4649|consen 320 ELSNEIFSSPVIIDGRLLIGCRDDYVRCLDLDTW 353 (354)
T ss_pred ecCcccccCCeEEccEEEEEEccCeEEEEecccc
Confidence 2111100011 0116888999999999999864
No 294
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.10 E-value=1.3e-08 Score=89.14 Aligned_cols=181 Identities=18% Similarity=0.109 Sum_probs=137.4
Q ss_pred CCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc
Q 019326 42 LSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV 121 (343)
Q Consensus 42 ~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 121 (343)
...++|+++++.+|+-|..+|.|++++.+.. . .....| ... ...| .++++|+.||+|.|-.+.+.+
T Consensus 39 ~D~is~~av~~~~~~~GtH~g~v~~~~~~~~-~-~~~~~~-s~~------~~~G-----ey~asCS~DGkv~I~sl~~~~ 104 (846)
T KOG2066|consen 39 NDAISCCAVHDKFFALGTHRGAVYLTTCQGN-P-KTNFDH-SSS------ILEG-----EYVASCSDDGKVVIGSLFTDD 104 (846)
T ss_pred hhHHHHHHhhcceeeeccccceEEEEecCCc-c-cccccc-ccc------ccCC-----ceEEEecCCCcEEEeeccCCc
Confidence 5678888999999999999999999998743 3 344445 332 4455 899999999999999998877
Q ss_pred eeeeeeeccccEEEEEEecC-----CCEEEEEeCCCeEEEEEcc---CCceeEEEEcCCcceEEEEeCCCCEEEEEeCCc
Q 019326 122 LLTSVKVHKKGVNDLAVHHS-----GKLALTVGRDDCLAMVNLV---RGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEK 193 (343)
Q Consensus 122 ~~~~~~~~~~~v~~i~~~~~-----~~~l~~~~~d~~i~~wd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (343)
...++. ...++.+++++|+ .+.+++|+.-| +.++.-+ ....+......++|.++.| .|++++-+.|-.
T Consensus 105 ~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W--~g~lIAWand~G 180 (846)
T KOG2066|consen 105 EITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKW--RGNLIAWANDDG 180 (846)
T ss_pred cceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEe--cCcEEEEecCCC
Confidence 777766 5678999999997 47899999888 7766532 1222334455678888888 578888889999
Q ss_pred EEEEEcccceeEEEecCC-------cceEEeeecCCCeEEEEeCCCcEEEEECCC
Q 019326 194 VGIHQAEDAKLLCELDGK-------KRILCAAPGENGVLFTGGEDRSITAWDTNS 241 (343)
Q Consensus 194 i~~~d~~~~~~~~~~~~~-------~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~ 241 (343)
+++||..+.+.+..++.+ .-...+.|.+...|+.|-.| +|+|..++.
T Consensus 181 v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVIGW~d-~v~i~~I~~ 234 (846)
T KOG2066|consen 181 VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVIGWGD-SVKICSIKK 234 (846)
T ss_pred cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEEecCC-eEEEEEEec
Confidence 999999999888877622 12345677778888888665 688888873
No 295
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.09 E-value=1e-08 Score=80.04 Aligned_cols=239 Identities=16% Similarity=0.208 Sum_probs=154.8
Q ss_pred CCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC-----eeeeEeccCC-----------CCCeEEEEEeCCCCCCCCce
Q 019326 41 HLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS-----SSLGAIHHHE-----------SSSVTSLAFYTPQNLSVPRN 102 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~-----------~~~v~~l~~~~~~~~~~~~~ 102 (343)
....|+++.|. |.+|++|...|.|.+|.-... +...+|++|+ ...|..+.|..+++. ..
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r---~h 101 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGR---NH 101 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCc---ce
Confidence 35679999998 899999999999999976543 2334455552 245888888877632 56
Q ss_pred EEEeeCCCeEEEEECCCcc------------------------------------------eeeee-eeccccEEEEEEe
Q 019326 103 LFSTSADGFVSIFDADPFV------------------------------------------LLTSV-KVHKKGVNDLAVH 139 (343)
Q Consensus 103 l~s~~~dg~i~iwd~~~~~------------------------------------------~~~~~-~~~~~~v~~i~~~ 139 (343)
++..+.|.+|++|.+.... +.+.. ..|.--+.++.|+
T Consensus 102 FLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~N 181 (460)
T COG5170 102 FLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFN 181 (460)
T ss_pred EEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeec
Confidence 7777899999999874210 00111 2466678899999
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCceeEEE-Ec--------CCcceEEEEeCCCC-EEEEE-eCCcEEEEEcccceeE---
Q 019326 140 HSGKLALTVGRDDCLAMVNLVRGRRSFYH-KI--------GKEASLIKFDGSGE-KFFMV-TEEKVGIHQAEDAKLL--- 205 (343)
Q Consensus 140 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~--------~~~~~~~~~~~~~~-~~~~~-~~~~i~~~d~~~~~~~--- 205 (343)
.+...++++ .|-.|.+|++......... .. ..-+++..|+|... .+.-. +.|.|++-|++...+.
T Consensus 182 sD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~ 260 (460)
T COG5170 182 SDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNS 260 (460)
T ss_pred Cchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCc
Confidence 888777765 5678999998754422211 11 13467788888644 33333 8999999999853221
Q ss_pred ---EEe--c---------CCcceEEeeecCCCeEEEEeCCCcEEEEECCCC-ceeEEeccccc------------ccE--
Q 019326 206 ---CEL--D---------GKKRILCAAPGENGVLFTGGEDRSITAWDTNSG-KVAYCIEDAHS------------ARV-- 256 (343)
Q Consensus 206 ---~~~--~---------~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~h~------------~~v-- 256 (343)
... . --..|..+.|++++.++.+-.--++++||.+.. .++.+++ -|. ..|
T Consensus 261 ~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k~pikTi~-~h~~l~~~l~d~YEnDaifd 339 (460)
T COG5170 261 KKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAKNPIKTIP-MHCDLMDELNDVYENDAIFD 339 (460)
T ss_pred hhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccccCCceeec-hHHHHHHHHHhhhhccceee
Confidence 111 1 124577888987654444445578999999754 4666665 342 222
Q ss_pred -EEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 257 -KGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
..+.|+.+.. .+.+|+.....-++-+.+
T Consensus 340 kFeisfSgd~~---------~v~sgsy~NNfgiyp~~s 368 (460)
T COG5170 340 KFEISFSGDDK---------HVLSGSYSNNFGIYPTDS 368 (460)
T ss_pred eEEEEecCCcc---------cccccccccceeeecccc
Confidence 2445555554 788888877777776443
No 296
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=99.06 E-value=1.1e-07 Score=72.81 Aligned_cols=191 Identities=12% Similarity=0.010 Sum_probs=129.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEE---ecCceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVA---VSGTAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
-|+.|+..|...+|...+. .. .......|...|+-+. -....+..++.|.++++.+++.+......
T Consensus 86 ~la~gG~~g~fd~~~~~tn-------~~----h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~ 154 (344)
T KOG4532|consen 86 TLADGGASGQFDLFACNTN-------DG----HLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAV 154 (344)
T ss_pred EEEeccccceeeeecccCc-------cc----ceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCccccee
Confidence 3788889999999998761 11 1112223444333222 12345666788888888888755433333
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC-cceeee-e-eeccccEEEEEEecCCCEEEEEeCCCeEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP-FVLLTS-V-KVHKKGVNDLAVHHSGKLALTVGRDDCLA 155 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~-~-~~~~~~v~~i~~~~~~~~l~~~~~d~~i~ 155 (343)
... .-.+.++++++++ +++++.+....|..|.++. ++.+.. . ....+.-.+..|+.....+|++..||++.
T Consensus 155 h~~-~~~~ns~~~snd~-----~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~ 228 (344)
T KOG4532|consen 155 HNQ-NLTQNSLHYSNDP-----SWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCA 228 (344)
T ss_pred ecc-ccceeeeEEcCCC-----ceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEE
Confidence 222 2348899999998 8999999999999999854 333222 2 22333456788999999999999999999
Q ss_pred EEEccCCceeEE------EEcCCcceEEEEeCCCC--EEEEE-eCCcEEEEEcccceeEEEec
Q 019326 156 MVNLVRGRRSFY------HKIGKEASLIKFDGSGE--KFFMV-TEEKVGIHQAEDAKLLCELD 209 (343)
Q Consensus 156 ~wd~~~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~-~~~~i~~~d~~~~~~~~~~~ 209 (343)
+||++....... ..+.+.+..+.|++.|. +|+.. .-+.+.+.|+++.+..+.+.
T Consensus 229 I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~ 291 (344)
T KOG4532|consen 229 IYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIV 291 (344)
T ss_pred EEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEe
Confidence 999997653322 22457788899998665 44445 67889999999987665543
No 297
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=99.05 E-value=4.3e-07 Score=80.24 Aligned_cols=229 Identities=13% Similarity=0.170 Sum_probs=140.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC---CCeE-EEEecCceEEEee---------CCCeEEEEE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL---SPIT-TVAVSGTAAASGG---------TDDTIHLYD 68 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~-~l~~~~~~l~s~~---------~dg~i~iwd 68 (343)
++++++.++.|+.+|.++ ++..-.. ....+. ..+. +..+.+..++.++ .+|.+..+|
T Consensus 112 ~V~v~~~~g~v~AlD~~T-------G~~~W~~---~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD 181 (488)
T cd00216 112 KVFFGTFDGRLVALDAET-------GKQVWKF---GNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYD 181 (488)
T ss_pred eEEEecCCCeEEEEECCC-------CCEeeee---cCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEE
Confidence 467788899999999887 2222111 111110 0011 1122245555554 468899999
Q ss_pred cCCCeeeeEeccCCCCC-------------------e-EEEEEeCCCCCCCCceEEEeeCCC------------------
Q 019326 69 LSTSSSLGAIHHHESSS-------------------V-TSLAFYTPQNLSVPRNLFSTSADG------------------ 110 (343)
Q Consensus 69 ~~~~~~~~~~~~~~~~~-------------------v-~~l~~~~~~~~~~~~~l~s~~~dg------------------ 110 (343)
..+|+.+..+....... + ...++.+.+ ..++.++.++
T Consensus 182 ~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~-----g~V~vg~~~g~~~~~~~~~~~~~~~~~~ 256 (488)
T cd00216 182 VETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKT-----NLVYVGTGNGSPWNWGGRRTPGDNLYTD 256 (488)
T ss_pred CCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCC-----CEEEEECCCCCCCccCCccCCCCCCcee
Confidence 99999988876431110 1 012333333 4677777655
Q ss_pred eEEEEECCCcceeeeeeeccccEE------EEEEe----cCCC---EEEEEeCCCeEEEEEccCCceeEEEEcCCcceEE
Q 019326 111 FVSIFDADPFVLLTSVKVHKKGVN------DLAVH----HSGK---LALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLI 177 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~~~~~v~------~i~~~----~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 177 (343)
.|..+|.++++.+..++.-..... ...+. -++. .++.++.+|.+...|.++|+.+....... ..+
T Consensus 257 ~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~--~~~ 334 (488)
T cd00216 257 SIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE--QPM 334 (488)
T ss_pred eEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec--ccc
Confidence 799999999999888753211111 01111 1232 67788889999999999999887665431 112
Q ss_pred EEeCCCCEEEE-----------------E-eCCcEEEEEcccceeEEEecCC---------cce--EEeeecCCCeEEEE
Q 019326 178 KFDGSGEKFFM-----------------V-TEEKVGIHQAEDAKLLCELDGK---------KRI--LCAAPGENGVLFTG 228 (343)
Q Consensus 178 ~~~~~~~~~~~-----------------~-~~~~i~~~d~~~~~~~~~~~~~---------~~i--~~~~~~~~~~l~~~ 228 (343)
..+| +..++. . .++.+.-+|..+++.+.+.... .+. ..+.. .++.++++
T Consensus 335 ~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~-~g~~v~~g 412 (488)
T cd00216 335 AYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT-AGNLVFAG 412 (488)
T ss_pred ccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEe-cCCeEEEE
Confidence 3333 222221 1 3577888999999988877633 111 11222 56788999
Q ss_pred eCCCcEEEEECCCCceeEEec
Q 019326 229 GEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 229 ~~dg~i~i~d~~~~~~~~~~~ 249 (343)
+.||.|+.+|..+|+.+.+.+
T Consensus 413 ~~dG~l~ald~~tG~~lW~~~ 433 (488)
T cd00216 413 AADGYFRAFDATTGKELWKFR 433 (488)
T ss_pred CCCCeEEEEECCCCceeeEEE
Confidence 999999999999999999887
No 298
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=99.05 E-value=8.1e-09 Score=91.51 Aligned_cols=189 Identities=17% Similarity=0.222 Sum_probs=134.1
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccc
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKK 131 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 131 (343)
+..++-|+-...+..+|+.+.+..+...-. ...|.-++.+ + +.+++|...|+|.+-|.++.+.++++..|.+
T Consensus 147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~-a~~v~imR~N--n-----r~lf~G~t~G~V~LrD~~s~~~iht~~aHs~ 218 (1118)
T KOG1275|consen 147 PSTLIMGGLQEKLIHIDLNTEKETRTTNVS-ASGVTIMRYN--N-----RNLFCGDTRGTVFLRDPNSFETIHTFDAHSG 218 (1118)
T ss_pred Ccceeecchhhheeeeecccceeeeeeecc-CCceEEEEec--C-----cEEEeecccceEEeecCCcCceeeeeecccc
Confidence 456777777778888999988887776655 5556666654 3 6899999999999999999999999999999
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCC
Q 019326 132 GVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGK 211 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 211 (343)
.|.++.. .|+.|+++|..+..... ..|..++|||++..+.+..+...
T Consensus 219 siSDfDv--~GNlLitCG~S~R~~~l-------------------------------~~D~FvkVYDLRmmral~PI~~~ 265 (1118)
T KOG1275|consen 219 SISDFDV--QGNLLITCGYSMRRYNL-------------------------------AMDPFVKVYDLRMMRALSPIQFP 265 (1118)
T ss_pred ceeeeec--cCCeEEEeecccccccc-------------------------------cccchhhhhhhhhhhccCCcccc
Confidence 9987655 57899999874321100 12445666666665555544422
Q ss_pred cceEEeeecC--CCeEEEEeCCCcEEEEEC---CCCc-eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCc
Q 019326 212 KRILCAAPGE--NGVLFTGGEDRSITAWDT---NSGK-VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGV 285 (343)
Q Consensus 212 ~~i~~~~~~~--~~~l~~~~~dg~i~i~d~---~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~ 285 (343)
....-+.|.| ...+++++..|...+-|. .+.. .+..+. .....+.++.++++++ .++.|..+|.
T Consensus 266 ~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~-p~~s~i~~fDiSsn~~---------alafgd~~g~ 335 (1118)
T KOG1275|consen 266 YGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVN-PNGSGISAFDISSNGD---------ALAFGDHEGH 335 (1118)
T ss_pred cCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEc-cCCCcceeEEecCCCc---------eEEEecccCc
Confidence 2223333333 357788888899999883 3321 122222 4556699999999988 9999999999
Q ss_pred EEEEec
Q 019326 286 ICVWDV 291 (343)
Q Consensus 286 i~vwd~ 291 (343)
|.+|.-
T Consensus 336 v~~wa~ 341 (1118)
T KOG1275|consen 336 VNLWAD 341 (1118)
T ss_pred EeeecC
Confidence 999973
No 299
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=99.05 E-value=1.6e-09 Score=82.29 Aligned_cols=206 Identities=13% Similarity=0.135 Sum_probs=125.9
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceee------------eeeeccccEEEEEEecC
Q 019326 74 SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLT------------SVKVHKKGVNDLAVHHS 141 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~------------~~~~~~~~v~~i~~~~~ 141 (343)
.+.++..|..-.++.+.++.+. .|+++..++.+......++.+.. .+.-|.++-.+-+.+-.
T Consensus 27 ~vD~i~~~~d~~~~~~~~v~~~------~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~ 100 (319)
T KOG4714|consen 27 LVDEIMQHADVKLSKVSLSAEY------ILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMT 100 (319)
T ss_pred chhhcccccceEEEEeechhhh------eeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCccccccc
Confidence 3334444423346667776654 77888888777666554433322 22223332222233334
Q ss_pred CCEEEEEeCCCeEEEEEccCCceeEEEEc--CCcceEEEEeCCCCEEEEEe------CCcEEEEEcccceeEEE-ecCCc
Q 019326 142 GKLALTVGRDDCLAMVNLVRGRRSFYHKI--GKEASLIKFDGSGEKFFMVT------EEKVGIHQAEDAKLLCE-LDGKK 212 (343)
Q Consensus 142 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------~~~i~~~d~~~~~~~~~-~~~~~ 212 (343)
++.++++..||.+.+++.+.-..+..... .......++...++.+.+.. -+..+.|+++..+.+.. .....
T Consensus 101 ~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~ 180 (319)
T KOG4714|consen 101 DNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALD 180 (319)
T ss_pred CCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccccc
Confidence 57899999999999999876221111100 01111122233344444332 33444555543322211 11233
Q ss_pred ceEEeeecC--CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 213 RILCAAPGE--NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 213 ~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
.+.+++-++ .+.+++|+.||.+-+||.++...+..+..+|..+|+.+-|+|..++ .|+++++||.+--||
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~--------~Lft~sedGslw~wd 252 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPE--------HLFTCSEDGSLWHWD 252 (319)
T ss_pred cchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCch--------heeEecCCCcEEEEc
Confidence 478887774 5688999999999999999887665555599999999999998764 799999999999999
Q ss_pred ccC
Q 019326 291 VRM 293 (343)
Q Consensus 291 ~~~ 293 (343)
..+
T Consensus 253 as~ 255 (319)
T KOG4714|consen 253 AST 255 (319)
T ss_pred CCC
Confidence 985
No 300
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=3.5e-08 Score=79.67 Aligned_cols=244 Identities=15% Similarity=0.158 Sum_probs=151.2
Q ss_pred eEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC
Q 019326 32 LTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA 108 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~ 108 (343)
++...-+.+|...|..++|+ ..++..++.+..|+|.|+++...+..+..+ ..+++++|.-+.. .++.+|..
T Consensus 183 fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~--~~~wSC~wDlde~----h~IYaGl~ 256 (463)
T KOG1645|consen 183 FKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY--NQIWSCCWDLDER----HVIYAGLQ 256 (463)
T ss_pred cchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc--CCceeeeeccCCc----ceeEEecc
Confidence 34445667888999999999 347888999999999999999998888888 8899999998873 78999999
Q ss_pred CCeEEEEECCCcc-eeeeeee--ccccEEEEEEec------CCCEEEEEeCCCeEEEEEccCCc--ee--EEEEcCCcce
Q 019326 109 DGFVSIFDADPFV-LLTSVKV--HKKGVNDLAVHH------SGKLALTVGRDDCLAMVNLVRGR--RS--FYHKIGKEAS 175 (343)
Q Consensus 109 dg~i~iwd~~~~~-~~~~~~~--~~~~v~~i~~~~------~~~~l~~~~~d~~i~~wd~~~~~--~~--~~~~~~~~~~ 175 (343)
+|.|.+||++..+ .+..+.+ ...+|..++.-+ .+..++....+ +..|++.... .. .....++...
T Consensus 257 nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~pG~ci 334 (463)
T KOG1645|consen 257 NGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPPGICI 334 (463)
T ss_pred CceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCCccee
Confidence 9999999997543 2222221 223454444332 23444444332 4556554322 22 2222234444
Q ss_pred EEEEeCCCCEEEEE--eCCc------EE-EEEcccceeEEEec--C-CcceE------E-eeecCCC-eEEEEeCCCcEE
Q 019326 176 LIKFDGSGEKFFMV--TEEK------VG-IHQAEDAKLLCELD--G-KKRIL------C-AAPGENG-VLFTGGEDRSIT 235 (343)
Q Consensus 176 ~~~~~~~~~~~~~~--~~~~------i~-~~d~~~~~~~~~~~--~-~~~i~------~-~~~~~~~-~l~~~~~dg~i~ 235 (343)
.+...+..+.++.. .+.+ +. -.|..++..+...+ + ..+-+ . ++.-+++ .+..|+..+.+.
T Consensus 335 smqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~li 414 (463)
T KOG1645|consen 335 SMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELI 414 (463)
T ss_pred eeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcceeE
Confidence 55566655655555 2111 11 12223333332222 1 11000 1 1111234 344566778899
Q ss_pred EEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 236 i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
+||..+.+.++++. -..+|.+++....+.+. +|+.-. |..++|+..+.
T Consensus 415 l~D~~s~evvQ~l~--~~epv~Dicp~~~n~~s-------yLa~LT-d~~v~Iyk~es 462 (463)
T KOG1645|consen 415 LQDPHSFEVVQTLA--LSEPVLDICPNDTNGSS-------YLALLT-DDRVHIYKNES 462 (463)
T ss_pred Eeccchhheeeecc--cCcceeecceeecCCcc-------hhhhee-cceEEEEecCC
Confidence 99999999999998 66899999887765433 666665 56788887654
No 301
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.99 E-value=7.3e-08 Score=84.54 Aligned_cols=173 Identities=11% Similarity=0.114 Sum_probs=125.0
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCC
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHE 82 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 82 (343)
|+-|+.+|.|++++... .+ .+...|... ...|.+++||+.||+|.|-.+.+.+....+.-+
T Consensus 52 ~~~GtH~g~v~~~~~~~-------------~~-~~~~~~s~~----~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~- 112 (846)
T KOG2066|consen 52 FALGTHRGAVYLTTCQG-------------NP-KTNFDHSSS----ILEGEYVASCSDDGKVVIGSLFTDDEITQYDFK- 112 (846)
T ss_pred eeeccccceEEEEecCC-------------cc-ccccccccc----ccCCceEEEecCCCcEEEeeccCCccceeEecC-
Confidence 67888999999998875 11 122234433 223999999999999999999999888888766
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceee--eeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLT--SVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
.++.+++++|+-..+..+.+++|+.-| +.++.-.-..... .+..-.++|.++.|. |++++-++.+| |++||+.
T Consensus 113 -rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~ 187 (846)
T KOG2066|consen 113 -RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTP 187 (846)
T ss_pred -CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCC-cEEEecc
Confidence 899999999993333447899999999 7777643211111 344456799999997 56888887766 9999999
Q ss_pred CCceeEEEEcCCc-------ceEEEEeCCCCEEEEEeCCcEEEEEcc
Q 019326 161 RGRRSFYHKIGKE-------ASLIKFDGSGEKFFMVTEEKVGIHQAE 200 (343)
Q Consensus 161 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~d~~ 200 (343)
+.+.+.....+.. ...+.|.+ ...++.|...+|++..++
T Consensus 188 ~~~~l~~i~~p~~~~R~e~fpphl~W~~-~~~LVIGW~d~v~i~~I~ 233 (846)
T KOG2066|consen 188 TRQRLTNIPPPSQSVRPELFPPHLHWQD-EDRLVIGWGDSVKICSIK 233 (846)
T ss_pred ccceeeccCCCCCCCCcccCCCceEecC-CCeEEEecCCeEEEEEEe
Confidence 9887766554421 33466665 456777777788888777
No 302
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.98 E-value=1.6e-08 Score=76.94 Aligned_cols=197 Identities=17% Similarity=0.185 Sum_probs=116.0
Q ss_pred eEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccC-CCCCeEEEEEeCCCC-----CCCCceEEEeeCCCeEEEEEC
Q 019326 45 ITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHH-ESSSVTSLAFYTPQN-----LSVPRNLFSTSADGFVSIFDA 117 (343)
Q Consensus 45 v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~l~~~~~~~-----~~~~~~l~s~~~dg~i~iwd~ 117 (343)
|+.+.+. ...|+++..++.+......++.+....+.. ..++..+++.+..-. .-..+.++++..||.+.+++.
T Consensus 39 ~~~~~~v~~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~ 118 (319)
T KOG4714|consen 39 LSKVSLSAEYILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFST 118 (319)
T ss_pred EEEeechhhheeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecCCCceEEEEec
Confidence 5566666 667888888887777666555443322110 012222232211000 001157999999999999998
Q ss_pred CCcc-eeeeeeeccccEEEEEEecCCCEEEEEe-----CCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-
Q 019326 118 DPFV-LLTSVKVHKKGVNDLAVHHSGKLALTVG-----RDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV- 189 (343)
Q Consensus 118 ~~~~-~~~~~~~~~~~v~~i~~~~~~~~l~~~~-----~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 189 (343)
+.-. ....+..-...-.+.+....++.+.++. .-+..+.|+++..+...... ....+.+++-+|..+.++++
T Consensus 119 ~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cg 198 (319)
T KOG4714|consen 119 DKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCG 198 (319)
T ss_pred hHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccccccchhhhCCcccccEEEEe
Confidence 6411 1111111111111222223333443332 12446677776544332222 22448889999987776666
Q ss_pred -eCCcEEEEEcccceeEEEec--CCcceEEeeecC--CCeEEEEeCCCcEEEEECCC
Q 019326 190 -TEEKVGIHQAEDAKLLCELD--GKKRILCAAPGE--NGVLFTGGEDRSITAWDTNS 241 (343)
Q Consensus 190 -~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~ 241 (343)
.+|.+.+||.++......+- |..++..+-|++ +..|+++++||.+-.||..+
T Consensus 199 t~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 199 TDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred cCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 89999999999875433322 889999999984 56899999999999999874
No 303
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.98 E-value=3.1e-07 Score=77.39 Aligned_cols=236 Identities=11% Similarity=0.081 Sum_probs=158.7
Q ss_pred EEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCC
Q 019326 64 IHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGK 143 (343)
Q Consensus 64 i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~ 143 (343)
...|+.........-... +-.-+-+.|+|.| .+|++-..-| |.+|--.....++.+. |. .|.-+.|+|..+
T Consensus 192 svfwN~~~n~p~~ie~Re-nWTetyv~wSP~G-----TYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp-~Vq~idfSP~Ek 262 (698)
T KOG2314|consen 192 SVFWNSKFNEPSLIEERE-NWTETYVRWSPKG-----TYLVTFHKQG-IALWGGESFDRIQRFY-HP-GVQFIDFSPNEK 262 (698)
T ss_pred EEEccccCCchhhhhhhh-cceeeeEEecCCc-----eEEEEEeccc-eeeecCccHHHHHhcc-CC-CceeeecCCccc
Confidence 455665543222111111 3445678999999 8999888776 7899888877777776 54 578899999999
Q ss_pred EEEEEeC-----------CCeEEEEEccCCceeEEEEcC----CcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEe
Q 019326 144 LALTVGR-----------DDCLAMVNLVRGRRSFYHKIG----KEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCEL 208 (343)
Q Consensus 144 ~l~~~~~-----------d~~i~~wd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 208 (343)
+|++-+. ...+.|||+++|.....+... ..-..+.||.++++++....+.|.||+..+..++..-
T Consensus 263 YLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~K 342 (698)
T KOG2314|consen 263 YLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKK 342 (698)
T ss_pred eEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccceEEEEecCceeeeccc
Confidence 9999774 257999999999877666552 2234589999999999998899999998886554433
Q ss_pred c-CCcceEEeeecCCC-eEEEEe-----CCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEE-
Q 019326 209 D-GKKRILCAAPGENG-VLFTGG-----EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASA- 280 (343)
Q Consensus 209 ~-~~~~i~~~~~~~~~-~l~~~~-----~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~- 280 (343)
. ....|....|+|.. +||-=. .--.+.+..+.+++.+++-. -|.-.=..|-|-.+++ +|+.-
T Consensus 343 slki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~n-lfnVsDckLhWQk~gd---------yLcvkv 412 (698)
T KOG2314|consen 343 SLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKN-LFNVSDCKLHWQKSGD---------YLCVKV 412 (698)
T ss_pred ccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeecc-ceeeeccEEEeccCCc---------EEEEEE
Confidence 3 44668888888754 333211 12346666777666666554 3433333444444444 55532
Q ss_pred ---------cCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCce
Q 019326 281 ---------SSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSF 322 (343)
Q Consensus 281 ---------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 322 (343)
+.=..+.|+.++. +.+|+........|...+|-|.|.-
T Consensus 413 dR~tK~~~~g~f~n~eIfrire----KdIpve~velke~vi~FaWEP~gdk 459 (698)
T KOG2314|consen 413 DRHTKSKVKGQFSNLEIFRIRE----KDIPVEVVELKESVIAFAWEPHGDK 459 (698)
T ss_pred EeeccccccceEeeEEEEEeec----cCCCceeeecchheeeeeeccCCCe
Confidence 2223567777765 4567777788888999999998653
No 304
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.97 E-value=2.1e-08 Score=78.34 Aligned_cols=198 Identities=13% Similarity=0.196 Sum_probs=136.6
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc-----eeeeeeecc------------ccEEEEEEecCC--C
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV-----LLTSVKVHK------------KGVNDLAVHHSG--K 143 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~------------~~v~~i~~~~~~--~ 143 (343)
...|+++.|...| .++++|...|.|.+|.-.... ....+++|. ..|..|.|..++ .
T Consensus 26 ad~ItaVefd~tg-----~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~ 100 (460)
T COG5170 26 ADKITAVEFDETG-----LYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRN 100 (460)
T ss_pred cceeeEEEecccc-----ceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcc
Confidence 5789999999998 799999999999999864322 233455553 357788887654 5
Q ss_pred EEEEEeCCCeEEEEEccCCce-------------------------e-------------------EEEEcCCcceEEEE
Q 019326 144 LALTVGRDDCLAMVNLVRGRR-------------------------S-------------------FYHKIGKEASLIKF 179 (343)
Q Consensus 144 ~l~~~~~d~~i~~wd~~~~~~-------------------------~-------------------~~~~~~~~~~~~~~ 179 (343)
.++..+.|.+|++|.+..... + ..-.++-.+.++.+
T Consensus 101 hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~ 180 (460)
T COG5170 101 HFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISF 180 (460)
T ss_pred eEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeee
Confidence 777888999999998764310 0 00011233567888
Q ss_pred eCCCCEEEEEeCCcEEEEEcccceeEEE---ec-CC-----cceEEeeecC--CCeEEEEeCCCcEEEEECCCCce----
Q 019326 180 DGSGEKFFMVTEEKVGIHQAEDAKLLCE---LD-GK-----KRILCAAPGE--NGVLFTGGEDRSITAWDTNSGKV---- 244 (343)
Q Consensus 180 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~---~~-~~-----~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~---- 244 (343)
..+.+.++++.+-.|.+|++........ ++ |. .-|++..|++ .+.+.-.+..|.|++-|++....
T Consensus 181 NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~ 260 (460)
T COG5170 181 NSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNS 260 (460)
T ss_pred cCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCc
Confidence 8899999999999999999875432221 22 22 3477888885 35677778899999999984321
Q ss_pred --eEEe--c-------ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 245 --AYCI--E-------DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 245 --~~~~--~-------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+... . .+-...|..+.|+++++ ++++-+. -++++||++..+
T Consensus 261 ~klfe~~~D~v~~~ff~eivsSISD~kFs~ngr---------yIlsRdy-ltvkiwDvnm~k 312 (460)
T COG5170 261 KKLFELTIDGVDVDFFEEIVSSISDFKFSDNGR---------YILSRDY-LTVKIWDVNMAK 312 (460)
T ss_pred hhhhhhccCcccchhHHHHhhhhcceEEcCCCc---------EEEEecc-ceEEEEeccccc
Confidence 1111 0 12345788899998886 7777765 589999998763
No 305
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.96 E-value=1.7e-06 Score=75.77 Aligned_cols=226 Identities=12% Similarity=0.116 Sum_probs=139.2
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC--------CCeE-----------------EEEe-----cC
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL--------SPIT-----------------TVAV-----SG 52 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~--------~~v~-----------------~l~~-----~~ 52 (343)
+.+|+..|.|+|+-+.+ .+.+...++++...-. ..|. .+++ +|
T Consensus 69 f~SgG~sG~~~v~G~PS-------mr~l~~ipvf~~~~~~G~G~~~esk~~l~~~~~~~~~~~gD~HHp~~s~t~g~ydG 141 (635)
T PRK02888 69 FWSGGHSGEVRILGLPS-------MRELMRIPVFNRDSATGWGITNESKKVLGEGARGGKYLNGDTHHPHMSFTDGTYDG 141 (635)
T ss_pred EeeCCccceEEEEecCC-------cceEEEeeeecCCCCcccCCchhHHHHhhccccCCcccCCCcCCCcccccCCccce
Confidence 67899999999999987 3444444443321100 0111 1111 15
Q ss_pred ceEEEeeC-CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEe--CCCCCCCCceEEEee------------------CCCe
Q 019326 53 TAAASGGT-DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFY--TPQNLSVPRNLFSTS------------------ADGF 111 (343)
Q Consensus 53 ~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~--~~~~~~~~~~l~s~~------------------~dg~ 111 (343)
++|+.-.. ...|-.-+++..++-+.+.-.....+..++|- |+. .+++.++ ..+.
T Consensus 142 r~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t-----~yv~~~~e~~~PlpnDGk~l~~~~ey~~~ 216 (635)
T PRK02888 142 RYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRT-----GYVFCNGEFRIPLPNDGKDLDDPKKYRSL 216 (635)
T ss_pred eEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCc-----cEEEeCcccccccCCCCCEeecccceeEE
Confidence 55655443 44455555555444333322213444445443 333 3333333 2356
Q ss_pred EEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEe----------------------------------------CC
Q 019326 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVG----------------------------------------RD 151 (343)
Q Consensus 112 i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~----------------------------------------~d 151 (343)
+.+.|.++++...++.-.. ....++++|+++++++.+ .+
T Consensus 217 vSvID~etmeV~~qV~Vdg-npd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~g 295 (635)
T PRK02888 217 FTAVDAETMEVAWQVMVDG-NLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGG 295 (635)
T ss_pred EEEEECccceEEEEEEeCC-CcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECC
Confidence 7777887777766665432 345677778887776665 23
Q ss_pred CeEEEEEccC-----CceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEccccee------------EEEecCCc
Q 019326 152 DCLAMVNLVR-----GRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKL------------LCELDGKK 212 (343)
Q Consensus 152 ~~i~~wd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~------------~~~~~~~~ 212 (343)
+.|.+.|.++ .+.......+..+..+.++|+|++++++ .+..+.++|+.+.+. ..+..-..
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGl 375 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGL 375 (635)
T ss_pred CEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCC
Confidence 5688888887 4566777888999999999999999998 789999999988653 33443333
Q ss_pred ceEEeeec-CCCeEEEEeCCCcEEEEECCC
Q 019326 213 RILCAAPG-ENGVLFTGGEDRSITAWDTNS 241 (343)
Q Consensus 213 ~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~ 241 (343)
.....+|. +++...+-.-|..|..||+.+
T Consensus 376 GPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 376 GPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 33445565 345666677899999999876
No 306
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.95 E-value=7.1e-07 Score=76.88 Aligned_cols=199 Identities=11% Similarity=-0.066 Sum_probs=121.0
Q ss_pred CeEEEEECCCcceeeeeeeccccEEEEEEecCCCE-EEEEeC---CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCE
Q 019326 110 GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKL-ALTVGR---DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEK 185 (343)
Q Consensus 110 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
..|.+-|.+... .+.+... +......|+|+|+. ++..+. +..|.++|+.+++.......+.......|+|+|+.
T Consensus 169 ~~l~~~d~dg~~-~~~~~~~-~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~ 246 (419)
T PRK04043 169 SNIVLADYTLTY-QKVIVKG-GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSK 246 (419)
T ss_pred ceEEEECCCCCc-eeEEccC-CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCE
Confidence 356666665543 3333323 37788999999974 554333 35699999998887666555666667889999998
Q ss_pred EEEE----eCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEE-EEeCCC--cEEEEECCCCceeEEecccccccEE
Q 019326 186 FFMV----TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLF-TGGEDR--SITAWDTNSGKVAYCIEDAHSARVK 257 (343)
Q Consensus 186 ~~~~----~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-~~~~dg--~i~i~d~~~~~~~~~~~~~h~~~v~ 257 (343)
++.. .+..|.++++.+++..+...+........|++ ++.|+ +....+ .|++.|+.+++..+... ....
T Consensus 247 la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~--~g~~-- 322 (419)
T PRK04043 247 LLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVF--HGKN-- 322 (419)
T ss_pred EEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCcc--CCCc--
Confidence 8766 23568888887776443323333333456774 54444 443333 58888888776533322 1111
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEcCC---------CcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccC
Q 019326 258 GIVVLTKNDGGSTAENPYLVASASSD---------GVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIG 328 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~s~~~d---------g~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~ 328 (343)
...|+|++. .|+..+.. ..|.+.|+.++.. ..+... .......|+|||+.++....
T Consensus 323 ~~~~SPDG~---------~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~---~~LT~~---~~~~~p~~SPDG~~I~f~~~ 387 (419)
T PRK04043 323 NSSVSTYKN---------YIVYSSRETNNEFGKNTFNLYLISTNSDYI---RRLTAN---GVNQFPRFSSDGGSIMFIKY 387 (419)
T ss_pred CceECCCCC---------EEEEEEcCCCcccCCCCcEEEEEECCCCCe---EECCCC---CCcCCeEECCCCCEEEEEEc
Confidence 236777776 66655543 2677778877632 222221 12335789999997766554
Q ss_pred C
Q 019326 329 D 329 (343)
Q Consensus 329 ~ 329 (343)
.
T Consensus 388 ~ 388 (419)
T PRK04043 388 L 388 (419)
T ss_pred c
Confidence 3
No 307
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.95 E-value=2.1e-06 Score=74.08 Aligned_cols=209 Identities=8% Similarity=-0.026 Sum_probs=125.2
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCce-EEEeeC---CCeEEEEECCCcceeeeeeeccccEEEEE
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRN-LFSTSA---DGFVSIFDADPFVLLTSVKVHKKGVNDLA 137 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~-l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~v~~i~ 137 (343)
..|.+-|.+... .+.+... .....-.|+|++ +. ++..+. +..|+++|+.+++...... ..+......
T Consensus 169 ~~l~~~d~dg~~-~~~~~~~--~~~~~p~wSpDG-----~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~ 239 (419)
T PRK04043 169 SNIVLADYTLTY-QKVIVKG--GLNIFPKWANKE-----QTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSD 239 (419)
T ss_pred ceEEEECCCCCc-eeEEccC--CCeEeEEECCCC-----CcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeE
Confidence 345555554333 3334444 377889999999 53 554433 3569999998876544433 455566788
Q ss_pred EecCCCEEEEE-eC--CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCC----cEEEEEcccceeEEEecC
Q 019326 138 VHHSGKLALTV-GR--DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEE----KVGIHQAEDAKLLCELDG 210 (343)
Q Consensus 138 ~~~~~~~l~~~-~~--d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~d~~~~~~~~~~~~ 210 (343)
|+|||+.++.. +. +..|.++|+.+++...............|+|+|+.++...+. .|.++|+.+++..+....
T Consensus 240 ~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~ 319 (419)
T PRK04043 240 VSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH 319 (419)
T ss_pred ECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC
Confidence 99999766544 33 356888898877654433333333456899999988877433 688888887766443322
Q ss_pred CcceEEeeec-CCCeEEEEeCC---------CcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEE
Q 019326 211 KKRILCAAPG-ENGVLFTGGED---------RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASA 280 (343)
Q Consensus 211 ~~~i~~~~~~-~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 280 (343)
... ...|+ +++.++..... ..|.+.|+.+++. ..+. .. .......|+|++. +|+..
T Consensus 320 g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT-~~-~~~~~p~~SPDG~---------~I~f~ 385 (419)
T PRK04043 320 GKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLT-AN-GVNQFPRFSSDGG---------SIMFI 385 (419)
T ss_pred CCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECC-CC-CCcCCeEECCCCC---------EEEEE
Confidence 111 23676 45655544432 3688889887754 4454 22 2223466777766 66555
Q ss_pred cCC-Cc--EEEEeccC
Q 019326 281 SSD-GV--ICVWDVRM 293 (343)
Q Consensus 281 ~~d-g~--i~vwd~~~ 293 (343)
+.+ +. +.+.++..
T Consensus 386 ~~~~~~~~L~~~~l~g 401 (419)
T PRK04043 386 KYLGNQSALGIIRLNY 401 (419)
T ss_pred EccCCcEEEEEEecCC
Confidence 433 33 44555543
No 308
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.94 E-value=4.8e-09 Score=57.50 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=37.0
Q ss_pred cceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 120 FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 120 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
++++.++++|.+.|.+++|+|++.+|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 467889999999999999999999999999999999997
No 309
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.93 E-value=1.2e-05 Score=64.55 Aligned_cols=167 Identities=15% Similarity=0.064 Sum_probs=112.4
Q ss_pred eEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc----CCCCCeEEEEEeCCCCCCCCceEEEeeCC--------C
Q 019326 45 ITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH----HESSSVTSLAFYTPQNLSVPRNLFSTSAD--------G 110 (343)
Q Consensus 45 v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~v~~l~~~~~~~~~~~~~l~s~~~d--------g 110 (343)
...+++. +..|+.+...+ +.++|..+++....... +.....+.+++.+++ ++.++.... |
T Consensus 42 ~~G~~~~~~~g~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G-----~ly~t~~~~~~~~~~~~g 115 (246)
T PF08450_consen 42 PNGMAFDRPDGRLYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDG-----NLYVTDSGGGGASGIDPG 115 (246)
T ss_dssp EEEEEEECTTSEEEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS------EEEEEECCBCTTCGGSE
T ss_pred CceEEEEccCCEEEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCC-----CEEEEecCCCcccccccc
Confidence 5566665 56666666655 56669988855443332 125678899999999 555555443 5
Q ss_pred eEEEEECCCcceeeeeeeccccEEEEEEecCCCEEE-EEeCCCeEEEEEccCCce-e----EEEEcCC---cceEEEEeC
Q 019326 111 FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLAL-TVGRDDCLAMVNLVRGRR-S----FYHKIGK---EASLIKFDG 181 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~~d~~i~~wd~~~~~~-~----~~~~~~~---~~~~~~~~~ 181 (343)
.|..++.. ++... +...-...+.|+|+|+++.|+ +-+..+.|..+++..... + ....... .+-.++++.
T Consensus 116 ~v~~~~~~-~~~~~-~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~ 193 (246)
T PF08450_consen 116 SVYRIDPD-GKVTV-VADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDS 193 (246)
T ss_dssp EEEEEETT-SEEEE-EEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBT
T ss_pred ceEEECCC-CeEEE-EecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcC
Confidence 57777777 44333 333445678999999998765 566788999999864332 1 1122222 367799999
Q ss_pred CCCEEEEE-eCCcEEEEEcccceeEEEecCC-cceEEeeec
Q 019326 182 SGEKFFMV-TEEKVGIHQAEDAKLLCELDGK-KRILCAAPG 220 (343)
Q Consensus 182 ~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~-~~i~~~~~~ 220 (343)
+|+..++. ..+.|.+++.. ++.+..+..+ ..+++++|.
T Consensus 194 ~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fg 233 (246)
T PF08450_consen 194 DGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFG 233 (246)
T ss_dssp TS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEE
T ss_pred CCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEE
Confidence 99988877 89999999988 8888877744 688999995
No 310
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.92 E-value=6.5e-09 Score=82.17 Aligned_cols=127 Identities=17% Similarity=0.159 Sum_probs=98.4
Q ss_pred CCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC-----eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEE
Q 019326 41 HLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS-----SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVS 113 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 113 (343)
..+.|.++.|. ++++..|...|.|..+|++.. .+...+ -| .+.|+++...... .++|++.+.+|+|+
T Consensus 251 sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh-~Ssvtslq~Lq~s----~q~LmaS~M~gkik 324 (425)
T KOG2695|consen 251 SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YH-DSSVTSLQILQFS----QQKLMASDMTGKIK 324 (425)
T ss_pred cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-Ec-Ccchhhhhhhccc----cceEeeccCcCcee
Confidence 45678888887 899999999999999999864 233333 35 7899999877633 27899999999999
Q ss_pred EEECCCcce---eeeeeeccccEEE--EEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCc
Q 019326 114 IFDADPFVL---LTSVKVHKKGVND--LAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKE 173 (343)
Q Consensus 114 iwd~~~~~~---~~~~~~~~~~v~~--i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 173 (343)
+||.+.-++ +.++.+|-..-.- +..++....+++++.|-..++|.++.+..+...+.+..
T Consensus 325 LyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s 389 (425)
T KOG2695|consen 325 LYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYS 389 (425)
T ss_pred EeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCCCc
Confidence 999977666 8888888653222 33455667889999999999999999988777666543
No 311
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.92 E-value=5.1e-06 Score=64.73 Aligned_cols=191 Identities=15% Similarity=0.148 Sum_probs=116.8
Q ss_pred EEEeCCCCCCCCceEEEeeCCCeEEEEECCCc--ceeeeeee---ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc
Q 019326 89 LAFYTPQNLSVPRNLFSTSADGFVSIFDADPF--VLLTSVKV---HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR 163 (343)
Q Consensus 89 l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~---~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~ 163 (343)
++.+++| .+++.-.|..|.|-..+.. ..+...+. ....-.-++|+||+..|+.+...|+|+++|+....
T Consensus 3 ~~~~~~G------k~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~ 76 (282)
T PF15492_consen 3 LALSSDG------KLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE 76 (282)
T ss_pred eeecCCC------cEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce
Confidence 4555666 4455556667766655331 12222222 22356789999999999999999999999997543
Q ss_pred eeEEEE--------cCCcceEEEEeCCC-------CEEEEEeCCcEEEEEccc-----ceeEEEec----CCcceEEeee
Q 019326 164 RSFYHK--------IGKEASLIKFDGSG-------EKFFMVTEEKVGIHQAED-----AKLLCELD----GKKRILCAAP 219 (343)
Q Consensus 164 ~~~~~~--------~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~d~~~-----~~~~~~~~----~~~~i~~~~~ 219 (343)
. .... ....+..+.|.+.. +.++....|.++-|-+.. .+....+. .+..|.++.+
T Consensus 77 l-f~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy 155 (282)
T PF15492_consen 77 L-FVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVY 155 (282)
T ss_pred e-EEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEE
Confidence 2 2221 12345556664432 345555888888776532 23333333 4678999999
Q ss_pred cCC-CeEEEEeC-CC----------cEEEEECCCCceeEEec----------------------------ccccccEEEE
Q 019326 220 GEN-GVLFTGGE-DR----------SITAWDTNSGKVAYCIE----------------------------DAHSARVKGI 259 (343)
Q Consensus 220 ~~~-~~l~~~~~-dg----------~i~i~d~~~~~~~~~~~----------------------------~~h~~~v~~~ 259 (343)
+++ ++|++|+. .. -+..|.+-++.+..... ......|..|
T Consensus 156 ~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~km 235 (282)
T PF15492_consen 156 HPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKM 235 (282)
T ss_pred cCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEE
Confidence 876 56665552 11 25667654433222110 0123455666
Q ss_pred EEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 260 VVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
..+|++. .||+...+|.|.+|++.+..
T Consensus 236 SlSPdg~---------~La~ih~sG~lsLW~iPsL~ 262 (282)
T PF15492_consen 236 SLSPDGS---------LLACIHFSGSLSLWEIPSLR 262 (282)
T ss_pred EECCCCC---------EEEEEEcCCeEEEEecCcch
Confidence 6666665 99999999999999998864
No 312
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.91 E-value=7.4e-10 Score=97.73 Aligned_cols=200 Identities=14% Similarity=0.117 Sum_probs=142.7
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
++...+++.|...-+|++|+ .+.|+.|+..|.|+++++.+|.......+| .++|+.+.-+.+++ ..|.+++..
T Consensus 1091 Fr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH-~SavT~vePs~dgs----~~Ltsss~S 1165 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCH-QSAVTLVEPSVDGS----TQLTSSSSS 1165 (1516)
T ss_pred cccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCcccccccccc-ccccccccccCCcc----eeeeecccc
Confidence 45667788899999999999 689999999999999999999999999999 99999999998883 334444444
Q ss_pred C-eEEEEECC-CcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-----cCCcceEEEEeCC
Q 019326 110 G-FVSIFDAD-PFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-----IGKEASLIKFDGS 182 (343)
Q Consensus 110 g-~i~iwd~~-~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-----~~~~~~~~~~~~~ 182 (343)
. -..+|++. .+...+++.. -.++.|+.....-+.|..-....+||++++......- ....-++..|+|.
T Consensus 1166 ~PlsaLW~~~s~~~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~ 1241 (1516)
T KOG1832|consen 1166 SPLSALWDASSTGGPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPC 1241 (1516)
T ss_pred CchHHHhccccccCccccccc----cceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCC
Confidence 3 57789984 4555666553 3567787665444555555678999999987654321 2234477889998
Q ss_pred CCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 183 GEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 183 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
...++ .|| .+||.+..+.++.+..-.--..-.|++ +..++..+. |||+++.+.+...+
T Consensus 1242 D~LIl--ndG--vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINSE-----IwD~RTF~lLh~VP 1300 (1516)
T KOG1832|consen 1242 DTLIL--NDG--VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINSE-----IWDMRTFKLLHSVP 1300 (1516)
T ss_pred cceEe--eCc--eeeeeccHHHHhhhhhheecccccccCCCceEEeech-----hhhhHHHHHHhcCc
Confidence 87765 233 579998887777766332222334554 455655543 89999988776655
No 313
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.90 E-value=1.4e-06 Score=77.33 Aligned_cols=205 Identities=17% Similarity=0.212 Sum_probs=144.4
Q ss_pred CeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCC-eEEEEEeCCCCCCCCceEEEeeCCC-----eEEEEEC
Q 019326 44 PITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSS-VTSLAFYTPQNLSVPRNLFSTSADG-----FVSIFDA 117 (343)
Q Consensus 44 ~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-v~~l~~~~~~~~~~~~~l~s~~~dg-----~i~iwd~ 117 (343)
.|+|+.-++..++.|+.+|.|.+.+-. -+.+..++.+ ... |..+...... .+|++.+.|+ .+++|++
T Consensus 27 ~isc~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~-~~siv~~L~~~~~~-----~~L~sv~Ed~~~np~llkiw~l 99 (933)
T KOG2114|consen 27 AISCCSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAY-EQSIVQFLYILNKQ-----NFLFSVGEDEQGNPVLLKIWDL 99 (933)
T ss_pred ceeEEcCCCceEEEeeccccEEEeccc-ceeeehheec-chhhhhHhhcccCc-----eEEEEEeecCCCCceEEEEecc
Confidence 788777778999999999998887743 4555788887 555 5555444443 6888888875 4899998
Q ss_pred CCc------ceee--eeee-----ccccEEEEEEecCCCEEEEEeCCCeEEEEEccC-----CceeEEEEcCCcceEEEE
Q 019326 118 DPF------VLLT--SVKV-----HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR-----GRRSFYHKIGKEASLIKF 179 (343)
Q Consensus 118 ~~~------~~~~--~~~~-----~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~-----~~~~~~~~~~~~~~~~~~ 179 (343)
+.. +++. .+.. ...++.+++.+.+-+.+++|-.+|.|..+.-.- .+.........+|+.+++
T Consensus 100 ek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~ 179 (933)
T KOG2114|consen 100 EKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLAL 179 (933)
T ss_pred cccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEE
Confidence 432 3331 1222 245789999999999999999999999884321 123334455688999999
Q ss_pred eCCCCE-EEEEeCCcEEEEEccccee-EEEec-CCcceEEeeecCCCe-EEEEeCCCcEEEEECCCCceeEEeccccccc
Q 019326 180 DGSGEK-FFMVTEEKVGIHQAEDAKL-LCELD-GKKRILCAAPGENGV-LFTGGEDRSITAWDTNSGKVAYCIEDAHSAR 255 (343)
Q Consensus 180 ~~~~~~-~~~~~~~~i~~~d~~~~~~-~~~~~-~~~~i~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~ 255 (343)
..++.. ++++....|.+|.+....+ ...+. +..++.|..++++.. +++++ +..+.+||.....+...+..+|...
T Consensus 180 ~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~~cfaf~~g~kk~ 258 (933)
T KOG2114|consen 180 RSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRGPCFAFEVGEKKE 258 (933)
T ss_pred ecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcceeeeecCCCeEE
Confidence 998888 4555888999999985442 33344 667889999987655 55444 4579999998777777776566544
Q ss_pred E
Q 019326 256 V 256 (343)
Q Consensus 256 v 256 (343)
.
T Consensus 259 ~ 259 (933)
T KOG2114|consen 259 M 259 (933)
T ss_pred E
Confidence 3
No 314
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.90 E-value=8.3e-08 Score=78.70 Aligned_cols=203 Identities=17% Similarity=0.163 Sum_probs=142.9
Q ss_pred CCCCCeEEEEec-CceEEEeeCCCeEEEEEcCC---CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-CCeEEE
Q 019326 40 AHLSPITTVAVS-GTAAASGGTDDTIHLYDLST---SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-DGFVSI 114 (343)
Q Consensus 40 ~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-dg~i~i 114 (343)
-|.+.|+.+... .+++++++.||.++.|--.. -+.+..+..| ...|.+++.+-++ .++.+++. |..+++
T Consensus 7 mhrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraH-L~~I~sl~~S~dg-----~L~~Sv~d~Dhs~Kv 80 (558)
T KOG0882|consen 7 MHRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAH-LGVILSLAVSYDG-----WLFRSVEDPDHSVKV 80 (558)
T ss_pred cccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHH-HHHHHhhhccccc-----eeEeeccCcccceeE
Confidence 388889988888 89999999999999997543 1345556677 8889999999888 67888777 999999
Q ss_pred EECCCcceeeeeee--ccccEEEEEEecCC---CEEEEEeCCCeEEEEEccCCcee---EEEEcCCcceEEEEeCCCCEE
Q 019326 115 FDADPFVLLTSVKV--HKKGVNDLAVHHSG---KLALTVGRDDCLAMVNLVRGRRS---FYHKIGKEASLIKFDGSGEKF 186 (343)
Q Consensus 115 wd~~~~~~~~~~~~--~~~~v~~i~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 186 (343)
+|+.+...+.-++. ..+.+..+ .++.. ..-++.-.++.+.++|-....+. ....+-.++.++.+.+.+..+
T Consensus 81 fDvEn~DminmiKL~~lPg~a~wv-~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~ 159 (558)
T KOG0882|consen 81 FDVENFDMINMIKLVDLPGFAEWV-TSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSA 159 (558)
T ss_pred EEeeccchhhhcccccCCCceEEe-cCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccce
Confidence 99977655433332 12222211 12211 22233345788999997765422 222345789999999999999
Q ss_pred EEE-eCCcEEEEEccc------ceeEEEec----------CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEe
Q 019326 187 FMV-TEEKVGIHQAED------AKLLCELD----------GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCI 248 (343)
Q Consensus 187 ~~~-~~~~i~~~d~~~------~~~~~~~~----------~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 248 (343)
++. ..|.|..|.... .+....++ ......++.++ .+..+.+-+.|..|++++.++++.++.+
T Consensus 160 vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqei 239 (558)
T KOG0882|consen 160 VSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEI 239 (558)
T ss_pred eeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhh
Confidence 888 789999998873 22222222 23557788888 4677888889999999999998766554
Q ss_pred c
Q 019326 249 E 249 (343)
Q Consensus 249 ~ 249 (343)
.
T Consensus 240 D 240 (558)
T KOG0882|consen 240 D 240 (558)
T ss_pred h
Confidence 3
No 315
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.88 E-value=9.1e-07 Score=78.49 Aligned_cols=190 Identities=15% Similarity=0.164 Sum_probs=130.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCC-eEEEEec--CceEEEeeCCCe-----EEEEEcCCC-
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSP-ITTVAVS--GTAAASGGTDDT-----IHLYDLSTS- 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~~--~~~l~s~~~dg~-----i~iwd~~~~- 72 (343)
.+|.|+.+|.|.+++-. ++.++.++++... |..+... .++|++.+.|+. +++|+++.-
T Consensus 37 ~vvigt~~G~V~~Ln~s-------------~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~ 103 (933)
T KOG2114|consen 37 SVVIGTADGRVVILNSS-------------FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVD 103 (933)
T ss_pred eEEEeeccccEEEeccc-------------ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccC
Confidence 57889999998887754 3555667777777 5555444 368888777654 899998743
Q ss_pred -----eee---eEec---cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC----cceeeeeeeccccEEEEE
Q 019326 73 -----SSL---GAIH---HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP----FVLLTSVKVHKKGVNDLA 137 (343)
Q Consensus 73 -----~~~---~~~~---~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~i~ 137 (343)
.++ +.+. +.+..++.+++.+.+- +.++.|-.+|.|..+.-+- +....-......+|+.++
T Consensus 104 ~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l-----~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~ 178 (933)
T KOG2114|consen 104 KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDL-----KTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLA 178 (933)
T ss_pred CCCCcceeeeeeeeccCCCCCCCcceEEEEEccc-----cEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeE
Confidence 223 1121 1125788999999887 7999999999999986421 111111122356999999
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCce-eE-EEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec
Q 019326 138 VHHSGKLALTVGRDDCLAMVNLVRGRR-SF-YHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD 209 (343)
Q Consensus 138 ~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 209 (343)
+..++..++-+..-..|.+|.+....+ .. ....+....|..+++....++++....+.+|+....++...+.
T Consensus 179 ~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 179 LRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFYDSDGRGPCFAFE 252 (933)
T ss_pred EecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecCceEEEEcCCCcceeeeec
Confidence 999887634444456799999874331 12 2344567888888888888999999999999987666555554
No 316
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=98.85 E-value=6.3e-08 Score=84.19 Aligned_cols=221 Identities=13% Similarity=0.184 Sum_probs=148.1
Q ss_pred CCCeEEEEec--CceEEEeeCCCeEEEEEcCCC-eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC
Q 019326 42 LSPITTVAVS--GTAAASGGTDDTIHLYDLSTS-SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD 118 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 118 (343)
.+++..+..+ |.-++.++.-| +.+-|++.. ...+-+..-..-.|-...|+|.. ..+..+++.+ ...-.+|++.
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~--a~~~wiVsts-~qkaiiwnlA 99 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHP--AKPYWIVSTS-NQKAIIWNLA 99 (1081)
T ss_pred cCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCC--CCceeEEecC-cchhhhhhhh
Confidence 4566667776 78888888877 556676643 22222221113356677788765 2223444444 4455679883
Q ss_pred C---cceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEEE--cCCcceEEEEeCCCCEEEEE-eC
Q 019326 119 P---FVLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHK--IGKEASLIKFDGSGEKFFMV-TE 191 (343)
Q Consensus 119 ~---~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~ 191 (343)
. ...-..+.+|...|+.+.|+|+. ..+++++.|-.+..||+++........ -......++|+.....+.+. ..
T Consensus 100 ~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg 179 (1081)
T KOG0309|consen 100 KSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHG 179 (1081)
T ss_pred cCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccC
Confidence 2 23444566889999999999875 688999999999999999876543322 24567779998866655555 88
Q ss_pred CcEEEEEcccce-eEEEec-CCcceEEeeec--CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCC
Q 019326 192 EKVGIHQAEDAK-LLCELD-GKKRILCAAPG--ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 192 ~~i~~~d~~~~~-~~~~~~-~~~~i~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
+.+.+||.+.+. ++..++ |-..+..+.|. ....+.+++.||+|+.||..+.............+|..-.+.|-++
T Consensus 180 ~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~ 258 (1081)
T KOG0309|consen 180 NDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGE 258 (1081)
T ss_pred CceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCc
Confidence 899999999754 555555 56667777776 3457889999999999998765433222213556677777777665
No 317
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=98.85 E-value=3.3e-05 Score=68.74 Aligned_cols=190 Identities=13% Similarity=0.118 Sum_probs=112.2
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCe-------EEEEecCceEEEeeCCCeEEEEEcCCCee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPI-------TTVAVSGTAAASGGTDDTIHLYDLSTSSS 74 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-------~~l~~~~~~l~s~~~dg~i~iwd~~~~~~ 74 (343)
.|++++.++.|+-+|..+ ++..-..... ......++ ..+++.+..++.++.|+.+.-.|..+|+.
T Consensus 71 ~vyv~s~~g~v~AlDa~T-------Gk~lW~~~~~-~~~~~~~~~~~~~~~rg~av~~~~v~v~t~dg~l~ALDa~TGk~ 142 (527)
T TIGR03075 71 VMYVTTSYSRVYALDAKT-------GKELWKYDPK-LPDDVIPVMCCDVVNRGVALYDGKVFFGTLDARLVALDAKTGKV 142 (527)
T ss_pred EEEEECCCCcEEEEECCC-------CceeeEecCC-CCcccccccccccccccceEECCEEEEEcCCCEEEEEECCCCCE
Confidence 467778888888888877 2221111100 00000010 12344567788889999999999999999
Q ss_pred eeEeccCCCC---CeEEEEEeCCCCCCCCceEEEeeC------CCeEEEEECCCcceeeeeeeccc--------------
Q 019326 75 LGAIHHHESS---SVTSLAFYTPQNLSVPRNLFSTSA------DGFVSIFDADPFVLLTSVKVHKK-------------- 131 (343)
Q Consensus 75 ~~~~~~~~~~---~v~~l~~~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~-------------- 131 (343)
+......... .+.+--..-++ .++.+.. +|.|..+|.++++.+..+..-..
T Consensus 143 ~W~~~~~~~~~~~~~tssP~v~~g------~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~ 216 (527)
T TIGR03075 143 VWSKKNGDYKAGYTITAAPLVVKG------KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGG 216 (527)
T ss_pred EeecccccccccccccCCcEEECC------EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCccccccccccccc
Confidence 8876532011 12111111123 4555432 68999999999988766542110
Q ss_pred -----------------cEE-EEEEecCCCEEEEEeCC-----C-----------eEEEEEccCCceeEEEEc-C-----
Q 019326 132 -----------------GVN-DLAVHHSGKLALTVGRD-----D-----------CLAMVNLVRGRRSFYHKI-G----- 171 (343)
Q Consensus 132 -----------------~v~-~i~~~~~~~~l~~~~~d-----~-----------~i~~wd~~~~~~~~~~~~-~----- 171 (343)
.+. .+++.|...+++.+..+ + .|.-.|+++|+....+.. +
T Consensus 217 ~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD 296 (527)
T TIGR03075 217 EPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWD 296 (527)
T ss_pred ccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCcc
Confidence 111 24666666666655521 2 678889999997765543 1
Q ss_pred ----CcceEEEEeCCCC---EEEEE-eCCcEEEEEcccceeE
Q 019326 172 ----KEASLIKFDGSGE---KFFMV-TEEKVGIHQAEDAKLL 205 (343)
Q Consensus 172 ----~~~~~~~~~~~~~---~~~~~-~~~~i~~~d~~~~~~~ 205 (343)
.....+.+..+++ .++.+ .+|.+.++|..+++.+
T Consensus 297 ~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 297 YDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred ccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 2233344445666 45555 8999999999999876
No 318
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.84 E-value=1e-08 Score=56.22 Aligned_cols=39 Identities=38% Similarity=0.635 Sum_probs=35.9
Q ss_pred CceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 242 GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 242 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
++++.++. +|...|++|+|+|++. +|++++.|+.|++||
T Consensus 1 g~~~~~~~-~h~~~i~~i~~~~~~~---------~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFR-GHSSSINSIAWSPDGN---------FLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEE-SSSSSEEEEEEETTSS---------EEEEEETTSEEEEEE
T ss_pred CeEEEEEc-CCCCcEEEEEEecccc---------cceeeCCCCEEEEEC
Confidence 35778888 9999999999999987 999999999999997
No 319
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.84 E-value=1.3e-07 Score=84.06 Aligned_cols=176 Identities=16% Similarity=0.198 Sum_probs=133.2
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCC
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHE 82 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 82 (343)
++.|+....+..+|+++ .+..+...-..+.|+-|+.++..+.+|...|+|.+-|..+.+.++++..|
T Consensus 150 ~i~Gg~Q~~li~~Dl~~------------~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aH- 216 (1118)
T KOG1275|consen 150 LIMGGLQEKLIHIDLNT------------EKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAH- 216 (1118)
T ss_pred eeecchhhheeeeeccc------------ceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCceeeeeecc-
Confidence 45666666677778776 22222222233458888888999999999999999999999999999999
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeC---------CCeEEEEECCCcceeeeeeeccccEEEEEEecCC-CEEEEEeCCC
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSA---------DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDD 152 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~ 152 (343)
.+.|..+... | ++|++++. |.-|+|||++..+.+..+.-+.++ .-+.|+|.- ..+++++..|
T Consensus 217 s~siSDfDv~--G-----NlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sG 288 (1118)
T KOG1275|consen 217 SGSISDFDVQ--G-----NLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSG 288 (1118)
T ss_pred ccceeeeecc--C-----CeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEeccc
Confidence 9999888765 3 57888876 445899999998887777766655 457788864 6788899999
Q ss_pred eEEEEEccC---Cc--eeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEc
Q 019326 153 CLAMVNLVR---GR--RSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQA 199 (343)
Q Consensus 153 ~i~~wd~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~ 199 (343)
...+.|..+ .. ..........+..++++++++.++.+ .+|.|.+|.-
T Consensus 289 q~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 289 QFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD 341 (1118)
T ss_pred ceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence 999999432 21 11222233558889999999999999 9999999973
No 320
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.83 E-value=3.9e-08 Score=80.57 Aligned_cols=198 Identities=9% Similarity=0.051 Sum_probs=145.5
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC---cceeeeeeeccccEEEEEEecCCCEEEEEeC-CCeEEEEE
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP---FVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-DDCLAMVN 158 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-d~~i~~wd 158 (343)
...|+.+..... +++++++.||.++.|--.. -+.+..+..|...|.+++.+.++..+.+.+. |..++++|
T Consensus 9 rd~i~hv~~tka------~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfD 82 (558)
T KOG0882|consen 9 RDVITHVFPTKA------KFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFD 82 (558)
T ss_pred cceeeeEeeehh------heEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEE
Confidence 667777766554 5999999999999998643 2445566778899999999999999999887 99999999
Q ss_pred ccCCceeEEEEcCCcceEEEEeCCCC----EEEEE--eCCcEEEEEcccce-eEEEec--CCcceEEeeecC-CCeEEEE
Q 019326 159 LVRGRRSFYHKIGKEASLIKFDGSGE----KFFMV--TEEKVGIHQAEDAK-LLCELD--GKKRILCAAPGE-NGVLFTG 228 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~i~~~d~~~~~-~~~~~~--~~~~i~~~~~~~-~~~l~~~ 228 (343)
++.-..+....+...+..+.|..... .+++. .++.+.++|-.... ....+. |..+|.++.+.+ +..+++.
T Consensus 83 vEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSi 162 (558)
T KOG0882|consen 83 VENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSI 162 (558)
T ss_pred eeccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeec
Confidence 98877665555554444444433222 44444 78899999977544 222222 889999999874 5678888
Q ss_pred eCCCcEEEEECCC------CceeEEec--------ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 229 GEDRSITAWDTNS------GKVAYCIE--------DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 229 ~~dg~i~i~d~~~------~~~~~~~~--------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
...|.|.-|.... .+....+. .-......++.|+|++. .+.+-+.|..|++++++++
T Consensus 163 D~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~---------qistl~~DrkVR~F~~KtG 233 (558)
T KOG0882|consen 163 DISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGA---------QISTLNPDRKVRGFVFKTG 233 (558)
T ss_pred cccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccC---------cccccCcccEEEEEEeccc
Confidence 8899999998772 11111221 02345678899999987 8999999999999999998
Q ss_pred c
Q 019326 295 I 295 (343)
Q Consensus 295 ~ 295 (343)
+
T Consensus 234 k 234 (558)
T KOG0882|consen 234 K 234 (558)
T ss_pred h
Confidence 4
No 321
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=98.79 E-value=2.3e-05 Score=64.20 Aligned_cols=217 Identities=21% Similarity=0.186 Sum_probs=135.4
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee-----
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV----- 126 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----- 126 (343)
++.|+.|..+| +.+++.........+... ..|..+...+.- +.|++-+ |+.++++++.........
T Consensus 7 ~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~--~~I~ql~vl~~~-----~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~ 77 (275)
T PF00780_consen 7 GDRLLVGTEDG-LYVYDLSDPSKPTRILKL--SSITQLSVLPEL-----NLLLVLS-DGQLYVYDLDSLEPVSTSAPLAF 77 (275)
T ss_pred CCEEEEEECCC-EEEEEecCCccceeEeec--ceEEEEEEeccc-----CEEEEEc-CCccEEEEchhhccccccccccc
Confidence 78899999998 899998433333333322 449999999887 4555443 599999998654433311
Q ss_pred ---------eeccccEEEEE--EecCCCEEEEEeCCCeEEEEEccCC-----ceeEEEEcCCcceEEEEeCCCCEEEEEe
Q 019326 127 ---------KVHKKGVNDLA--VHHSGKLALTVGRDDCLAMVNLVRG-----RRSFYHKIGKEASLIKFDGSGEKFFMVT 190 (343)
Q Consensus 127 ---------~~~~~~v~~i~--~~~~~~~l~~~~~d~~i~~wd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (343)
......+...+ -.+.+...++......|.+|..... +.......+..+..++|. ++.++.+.
T Consensus 78 ~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v~~ 155 (275)
T PF00780_consen 78 PKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICVGT 155 (275)
T ss_pred cccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEEEe
Confidence 11223444444 1223344444555568988888653 456677788999999998 67788887
Q ss_pred CCcEEEEEcccceeEEEecC-------------CcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeE--Eeccccccc
Q 019326 191 EEKVGIHQAEDAKLLCELDG-------------KKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAY--CIEDAHSAR 255 (343)
Q Consensus 191 ~~~i~~~d~~~~~~~~~~~~-------------~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~h~~~ 255 (343)
.+...+.|+.++.....+.. ..++..+...++.+|++- +..-.+.|. .|++.+ .+. =...
T Consensus 156 ~~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~~--~~~g~fv~~-~G~~~r~~~i~--W~~~ 230 (275)
T PF00780_consen 156 SKGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLCY--DNIGVFVNK-NGEPSRKSTIQ--WSSA 230 (275)
T ss_pred CCceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEEe--cceEEEEcC-CCCcCcccEEE--cCCc
Confidence 88899999997765544321 123445555445555543 333333343 454443 222 2345
Q ss_pred EEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc
Q 019326 256 VKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK 296 (343)
Q Consensus 256 v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 296 (343)
+.++++... +|+..+.+ .|.||++.++..
T Consensus 231 p~~~~~~~p-----------yli~~~~~-~iEV~~~~~~~l 259 (275)
T PF00780_consen 231 PQSVAYSSP-----------YLIAFSSN-SIEVRSLETGEL 259 (275)
T ss_pred hhEEEEECC-----------EEEEECCC-EEEEEECcCCcE
Confidence 667777544 77777765 499999999853
No 322
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.79 E-value=4.2e-05 Score=61.45 Aligned_cols=212 Identities=16% Similarity=0.206 Sum_probs=139.7
Q ss_pred ceEEEeeCCCe-EEEEEcCCCeeeeEeccCCCCCe--EEEEEeCCCCCCCCceEEEeeC-----CCeEEEEECC-Cccee
Q 019326 53 TAAASGGTDDT-IHLYDLSTSSSLGAIHHHESSSV--TSLAFYTPQNLSVPRNLFSTSA-----DGFVSIFDAD-PFVLL 123 (343)
Q Consensus 53 ~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~v--~~l~~~~~~~~~~~~~l~s~~~-----dg~i~iwd~~-~~~~~ 123 (343)
..++.+-.-|. ..+||..+++....+... .+.- -.-.|++++ ++|++.-. .|.|-|||.. +.+.+
T Consensus 18 ~avafaRRPG~~~~v~D~~~g~~~~~~~a~-~gRHFyGHg~fs~dG-----~~LytTEnd~~~g~G~IgVyd~~~~~~ri 91 (305)
T PF07433_consen 18 EAVAFARRPGTFALVFDCRTGQLLQRLWAP-PGRHFYGHGVFSPDG-----RLLYTTENDYETGRGVIGVYDAARGYRRI 91 (305)
T ss_pred eEEEEEeCCCcEEEEEEcCCCceeeEEcCC-CCCEEecCEEEcCCC-----CEEEEeccccCCCcEEEEEEECcCCcEEE
Confidence 34444444443 567888888777666443 2211 136799999 77777644 4789999998 77888
Q ss_pred eeeeeccccEEEEEEecCCCEEEEEeC------------------CCeEEEEEccCCceeEEEEcC-----CcceEEEEe
Q 019326 124 TSVKVHKKGVNDLAVHHSGKLALTVGR------------------DDCLAMVNLVRGRRSFYHKIG-----KEASLIKFD 180 (343)
Q Consensus 124 ~~~~~~~~~v~~i~~~~~~~~l~~~~~------------------d~~i~~wd~~~~~~~~~~~~~-----~~~~~~~~~ 180 (343)
.++..|.-.-..+.+.|+++.|+++-- +-.+.+.|..+|+.+....++ -.+..+++.
T Consensus 92 ~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~ 171 (305)
T PF07433_consen 92 GEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVD 171 (305)
T ss_pred eEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEec
Confidence 888888777788899999977776632 334566777888877665553 357789999
Q ss_pred CCCCEEEEE-eCCc-----EEEEEcccceeEEEec--------CCcceEEeeecC-CCeE-EEEeCCCcEEEEECCCCce
Q 019326 181 GSGEKFFMV-TEEK-----VGIHQAEDAKLLCELD--------GKKRILCAAPGE-NGVL-FTGGEDRSITAWDTNSGKV 244 (343)
Q Consensus 181 ~~~~~~~~~-~~~~-----i~~~d~~~~~~~~~~~--------~~~~i~~~~~~~-~~~l-~~~~~dg~i~i~d~~~~~~ 244 (343)
++|..++.. ..+. -.+.-.+.++.+..+. ....+-+++++. +..+ +++=..+.+.+||..+++.
T Consensus 172 ~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~ 251 (305)
T PF07433_consen 172 GDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRL 251 (305)
T ss_pred CCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCE
Confidence 999888877 3332 2222233333333333 346788999984 4444 5555688999999999998
Q ss_pred eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC
Q 019326 245 AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD 283 (343)
Q Consensus 245 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d 283 (343)
+.... -..+..++..+.+ +++|.+.-
T Consensus 252 ~~~~~---l~D~cGva~~~~~----------f~~ssG~G 277 (305)
T PF07433_consen 252 LGSVP---LPDACGVAPTDDG----------FLVSSGQG 277 (305)
T ss_pred eeccc---cCceeeeeecCCc----------eEEeCCCc
Confidence 77655 2345556555543 56666543
No 323
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.77 E-value=5.8e-06 Score=63.52 Aligned_cols=187 Identities=10% Similarity=0.016 Sum_probs=120.5
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccc
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKK 131 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 131 (343)
..+++.|+..+.+.--|.++|+.+++-... ..|.+-+..- + ++++.|+..|.+++.+.+++...+.+.....
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~ilg--~RiE~sa~vv-g-----dfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~ 94 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILG--VRIECSAIVV-G-----DFVVLGCYSGGLYFLCVKTGSQIWNFVILET 94 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhhC--ceeeeeeEEE-C-----CEEEEEEccCcEEEEEecchhheeeeeehhh
Confidence 578888999999999999999888766544 4555544442 3 5899999999999999999988888775433
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcce-EEEEeC-CCCEEEEEeCCcEEEEEcccc--eeEEE
Q 019326 132 GVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEAS-LIKFDG-SGEKFFMVTEEKVGIHQAEDA--KLLCE 207 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~i~~~d~~~~--~~~~~ 207 (343)
-=......+++..+..++.|++.+..|.++..++...+.++.+. .-++.| ++..+++...|.+.--..... ..+..
T Consensus 95 vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~~~~w~ 174 (354)
T KOG4649|consen 95 VKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSSTEFWA 174 (354)
T ss_pred hccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCCCCcceehh
Confidence 22234457788999999999999999999999888877665443 245555 444444445665555444443 22333
Q ss_pred ecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEE
Q 019326 208 LDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYC 247 (343)
Q Consensus 208 ~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 247 (343)
....+++.+--..-+..+..+.-||.+.-+| ..|+.+.+
T Consensus 175 ~~~~~PiF~splcv~~sv~i~~VdG~l~~f~-~sG~qvwr 213 (354)
T KOG4649|consen 175 ATRFGPIFASPLCVGSSVIITTVDGVLTSFD-ESGRQVWR 213 (354)
T ss_pred hhcCCccccCceeccceEEEEEeccEEEEEc-CCCcEEEe
Confidence 3333333321111123444445556555555 34444443
No 324
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.77 E-value=4.3e-09 Score=93.10 Aligned_cols=195 Identities=17% Similarity=0.130 Sum_probs=139.9
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCC
Q 019326 73 SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD 152 (343)
Q Consensus 73 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~ 152 (343)
+....|..+ +...+|++|+-.. +.|+.|+..|.|++|++.+|........|...|+.+.-+.+|..+++.+.-.
T Consensus 1092 r~w~~frd~-~~~fTc~afs~~~-----~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S 1165 (1516)
T KOG1832|consen 1092 RSWRSFRDE-TALFTCIAFSGGT-----NHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSS 1165 (1516)
T ss_pred ccchhhhcc-ccceeeEEeecCC-----ceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeecccc
Confidence 445667778 8899999999888 8999999999999999999999999999999999999999998777665533
Q ss_pred --eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEe-c----CCcceEEeeecCCCe
Q 019326 153 --CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCEL-D----GKKRILCAAPGENGV 224 (343)
Q Consensus 153 --~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~-~----~~~~i~~~~~~~~~~ 224 (343)
-..+|++..-- .....-..-.++.|+...+.-+.+ ......+||++++..+.++ . ....-++..|++...
T Consensus 1166 ~PlsaLW~~~s~~--~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~ 1243 (1516)
T KOG1832|consen 1166 SPLSALWDASSTG--GPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDT 1243 (1516)
T ss_pred CchHHHhcccccc--CccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcc
Confidence 36789876411 111111345667887766555555 6678899999998877663 2 223346777876554
Q ss_pred EEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 225 LFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 225 l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
|+. .||. +||.+..+.+..+. -....+.+ .|+|.+. .++.-+ -|||+++-.
T Consensus 1244 LIl--ndGv--LWDvR~~~aIh~FD-~ft~~~~G-~FHP~g~---------eVIINS-----EIwD~RTF~ 1294 (1516)
T KOG1832|consen 1244 LIL--NDGV--LWDVRIPEAIHRFD-QFTDYGGG-GFHPSGN---------EVIINS-----EIWDMRTFK 1294 (1516)
T ss_pred eEe--eCce--eeeeccHHHHhhhh-hheecccc-cccCCCc---------eEEeec-----hhhhhHHHH
Confidence 443 3553 69999888777776 33322222 4777776 666655 489998764
No 325
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=98.75 E-value=3e-05 Score=69.00 Aligned_cols=233 Identities=11% Similarity=0.106 Sum_probs=140.5
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC--CCeEE-EEecCceEEEeeC------CCeEEEEEcCCC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL--SPITT-VAVSGTAAASGGT------DDTIHLYDLSTS 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~-l~~~~~~l~s~~~------dg~i~iwd~~~~ 72 (343)
+++.++.|+.|..+|..+ ++..-..... .+. ..+++ -...++.++.+.. +|.|..+|.++|
T Consensus 122 ~v~v~t~dg~l~ALDa~T-------Gk~~W~~~~~---~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG 191 (527)
T TIGR03075 122 KVFFGTLDARLVALDAKT-------GKVVWSKKNG---DYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTG 191 (527)
T ss_pred EEEEEcCCCEEEEEECCC-------CCEEeecccc---cccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCC
Confidence 467788899999999877 3332221111 111 11221 1122455666543 689999999999
Q ss_pred eeeeEeccCCCC------------------------------CeE-EEEEeCCCCCCCCceEEEeeC-----CC------
Q 019326 73 SSLGAIHHHESS------------------------------SVT-SLAFYTPQNLSVPRNLFSTSA-----DG------ 110 (343)
Q Consensus 73 ~~~~~~~~~~~~------------------------------~v~-~l~~~~~~~~~~~~~l~s~~~-----dg------ 110 (343)
+.+..+..-... .+. .+++.+.. .+++.+.. ++
T Consensus 192 ~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~-----~lvy~~tGnp~p~~~~~r~gd 266 (527)
T TIGR03075 192 KLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPET-----NLIYFGTGNPSPWNSHLRPGD 266 (527)
T ss_pred ceeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCC-----CeEEEeCCCCCCCCCCCCCCC
Confidence 988876532111 011 22444443 34444441 12
Q ss_pred -----eEEEEECCCcceeeeeeeccccEE---------EEEEecCCC---EEEEEeCCCeEEEEEccCCceeEEEEc---
Q 019326 111 -----FVSIFDADPFVLLTSVKVHKKGVN---------DLAVHHSGK---LALTVGRDDCLAMVNLVRGRRSFYHKI--- 170 (343)
Q Consensus 111 -----~i~iwd~~~~~~~~~~~~~~~~v~---------~i~~~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~--- 170 (343)
.|.-.|+++++....++.....+. -+....+|+ .++.+..+|.+++.|-++++.+.....
T Consensus 267 nl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~ 346 (527)
T TIGR03075 267 NLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDT 346 (527)
T ss_pred CccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCC
Confidence 677788999999888875322111 122334565 788999999999999999987521100
Q ss_pred -------C----Ccc----------------------------eEEEEeCCCCEEEEE-eC-------------------
Q 019326 171 -------G----KEA----------------------------SLIKFDGSGEKFFMV-TE------------------- 191 (343)
Q Consensus 171 -------~----~~~----------------------------~~~~~~~~~~~~~~~-~~------------------- 191 (343)
. .++ ..++++|+..++++. .+
T Consensus 347 ~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~ 426 (527)
T TIGR03075 347 VNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYL 426 (527)
T ss_pred cccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCcee
Confidence 0 000 115566665555444 22
Q ss_pred --------------CcEEEEEcccceeEEEecCCcceE-EeeecCCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 192 --------------EKVGIHQAEDAKLLCELDGKKRIL-CAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 192 --------------~~i~~~d~~~~~~~~~~~~~~~i~-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
+.+.-+|+.+++...+.+...+.. ......+.+++.++.+|.++.+|.++|+.+.+.+
T Consensus 427 ~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~ 499 (527)
T TIGR03075 427 GAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKFK 499 (527)
T ss_pred ccccccCCCCCCCceeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEEe
Confidence 347778888888888776443321 1111255678888889999999999999999887
No 326
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.73 E-value=1.3e-06 Score=77.62 Aligned_cols=101 Identities=14% Similarity=0.157 Sum_probs=78.9
Q ss_pred CceEEEee----CCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeee
Q 019326 52 GTAAASGG----TDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK 127 (343)
Q Consensus 52 ~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 127 (343)
..+|++++ ..|.|.||- ++|++.+...-. -.+++++|+|.. -.|+.|-.-|.+.+|...+.+......
T Consensus 27 ePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P--~hatSLCWHpe~-----~vLa~gwe~g~~~v~~~~~~e~htv~~ 98 (1416)
T KOG3617|consen 27 EPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYP--VHATSLCWHPEE-----FVLAQGWEMGVSDVQKTNTTETHTVVE 98 (1416)
T ss_pred CceeEEEEecCCCCceEEEEe-cCCCCCcccccc--eehhhhccChHH-----HHHhhccccceeEEEecCCceeeeecc
Confidence 34455443 458888884 567655433322 346679999987 678888889999999998877666667
Q ss_pred eccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 128 VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 128 ~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
.|..+|..+.|+++|..++++..-|.+.+|...
T Consensus 99 th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 99 THPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred CCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 899999999999999999999999999999875
No 327
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.69 E-value=9e-05 Score=59.61 Aligned_cols=199 Identities=15% Similarity=0.146 Sum_probs=133.0
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCC-eEEEEECCCcceeeeeeeccccE--EEEEEecCCCEEEEEeC-----CCeEEE
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADG-FVSIFDADPFVLLTSVKVHKKGV--NDLAVHHSGKLALTVGR-----DDCLAM 156 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~v--~~i~~~~~~~~l~~~~~-----d~~i~~ 156 (343)
....++.+|.. +..++.+-.-| ...+||..+++....+....+.- -.-.|+++|++|++.-. .|.|-+
T Consensus 6 RgH~~a~~p~~----~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgV 81 (305)
T PF07433_consen 6 RGHGVAAHPTR----PEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGV 81 (305)
T ss_pred cccceeeCCCC----CeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEE
Confidence 44567788855 25677777766 47789999998887776443322 24679999999998654 588999
Q ss_pred EEcc-CCceeEEEEc-CCcceEEEEeCCCCEEEEEeCC-------------------cEEEEEcccceeEEEec-----C
Q 019326 157 VNLV-RGRRSFYHKI-GKEASLIKFDGSGEKFFMVTEE-------------------KVGIHQAEDAKLLCELD-----G 210 (343)
Q Consensus 157 wd~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------------------~i~~~d~~~~~~~~~~~-----~ 210 (343)
||.. +.+.+..+.. .-....+.+.|+++.|+++..| .+.+.|..+++++.+.. |
T Consensus 82 yd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~ 161 (305)
T PF07433_consen 82 YDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLH 161 (305)
T ss_pred EECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcccc
Confidence 9998 4444444443 3456678899999888888322 26667888888887743 5
Q ss_pred CcceEEeeecCCCeEEEEe-CCCc-------EEEEECCCCceeEEec------ccccccEEEEEEEecCCCCCCCCCCeE
Q 019326 211 KKRILCAAPGENGVLFTGG-EDRS-------ITAWDTNSGKVAYCIE------DAHSARVKGIVVLTKNDGGSTAENPYL 276 (343)
Q Consensus 211 ~~~i~~~~~~~~~~l~~~~-~dg~-------i~i~d~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~~~~~~~~~~ 276 (343)
...+..+++.....++.|. ..|. |.+++. ++.+..+. ..-...+-+|+++.++. +
T Consensus 162 ~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~---------~ 230 (305)
T PF07433_consen 162 QLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADRDGR---------L 230 (305)
T ss_pred ccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeCCCC---------E
Confidence 5678888887555555443 2221 334433 23232222 13457899999999886 6
Q ss_pred EEEE-cCCCcEEEEeccCccccC
Q 019326 277 VASA-SSDGVICVWDVRMAIKEK 298 (343)
Q Consensus 277 l~s~-~~dg~i~vwd~~~~~~~~ 298 (343)
++.. =.-+.+.+||..++....
T Consensus 231 ia~tsPrGg~~~~~d~~tg~~~~ 253 (305)
T PF07433_consen 231 IAVTSPRGGRVAVWDAATGRLLG 253 (305)
T ss_pred EEEECCCCCEEEEEECCCCCEee
Confidence 6544 456789999999985443
No 328
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.67 E-value=8.7e-05 Score=58.06 Aligned_cols=189 Identities=16% Similarity=0.170 Sum_probs=115.2
Q ss_pred CCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccC------CCCCeEEEEEeCCCCCCC-CceEEEeeCCCeEE
Q 019326 43 SPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHH------ESSSVTSLAFYTPQNLSV-PRNLFSTSADGFVS 113 (343)
Q Consensus 43 ~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~~~v~~l~~~~~~~~~~-~~~l~s~~~dg~i~ 113 (343)
..=.-++|+ +..||.+...|+|+++|+.. ..+..+... ...+|..|.|.+...... ...|++-...|.++
T Consensus 44 PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~ 122 (282)
T PF15492_consen 44 PQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLR 122 (282)
T ss_pred chheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceee
Confidence 345678998 78899999999999999985 333333322 146777787775541110 13677778888888
Q ss_pred EEECC-----Ccceeeeeee---ccccEEEEEEecCCCEEEEEeCCCe-----------EEEEEccCCceeEEEEcCCcc
Q 019326 114 IFDAD-----PFVLLTSVKV---HKKGVNDLAVHHSGKLALTVGRDDC-----------LAMVNLVRGRRSFYHKIGKEA 174 (343)
Q Consensus 114 iwd~~-----~~~~~~~~~~---~~~~v~~i~~~~~~~~l~~~~~d~~-----------i~~wd~~~~~~~~~~~~~~~~ 174 (343)
-|-+. ..+...++.. +...|.++.++|..++|++|+.... +..|.+-.+.+
T Consensus 123 Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~P---------- 192 (282)
T PF15492_consen 123 SYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSP---------- 192 (282)
T ss_pred eEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCC----------
Confidence 77653 2333444432 3568999999999988888875322 23333322221
Q ss_pred eEEEEeCCCCEEEEEeCCc------EEEEEcccceeEEE-ecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeE
Q 019326 175 SLIKFDGSGEKFFMVTEEK------VGIHQAEDAKLLCE-LDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAY 246 (343)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~------i~~~d~~~~~~~~~-~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~ 246 (343)
..+.+....++. ..++.+.+.+.... -.....|..|..+ ++..|++...+|.|.+|++.+-+...
T Consensus 193 -------yyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~ 265 (282)
T PF15492_consen 193 -------YYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQR 265 (282)
T ss_pred -------cEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhc
Confidence 111111111111 12222222222211 1245678888888 56799999999999999999877766
Q ss_pred Eec
Q 019326 247 CIE 249 (343)
Q Consensus 247 ~~~ 249 (343)
.+.
T Consensus 266 ~W~ 268 (282)
T PF15492_consen 266 SWK 268 (282)
T ss_pred ccc
Confidence 665
No 329
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.66 E-value=8.3e-05 Score=64.23 Aligned_cols=249 Identities=13% Similarity=0.107 Sum_probs=123.9
Q ss_pred CeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeE
Q 019326 10 KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVT 87 (343)
Q Consensus 10 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 87 (343)
..|+.+|+..... ..++.... .....+....-....+.++ ++++++ +.||.-.++.....+.... +.-.
T Consensus 2 ~~i~~~~~~~~~~-~~dg~~~~-l~~k~lg~~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~~------G~g~ 72 (443)
T PF04053_consen 2 NEIRTANLKNISE-IKDGERLP-LSVKELGSCEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKAF------GSGL 72 (443)
T ss_dssp TEEEEEE--S------TTS-B-----EEEEE-SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEEE------EE-S
T ss_pred CceEEEECcCCCc-cCCCceee-EEeccCCCCCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCccccc------Ccee
Confidence 4577777765321 11122222 2223333355567888888 666666 5578888888544443322 2334
Q ss_pred EEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEE
Q 019326 88 SLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFY 167 (343)
Q Consensus 88 ~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 167 (343)
...|.+.+ .+++-...++|.++.--..+....++.. ..+..|-. |..|...+.+ .|.+||..+++.+..
T Consensus 73 ~~vw~~~n------~yAv~~~~~~I~I~kn~~~~~~k~i~~~-~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~ 141 (443)
T PF04053_consen 73 SFVWSSRN------RYAVLESSSTIKIYKNFKNEVVKSIKLP-FSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRR 141 (443)
T ss_dssp EEEE-TSS------EEEEE-TTS-EEEEETTEE-TT-----S-S-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEE
T ss_pred EEEEecCc------cEEEEECCCeEEEEEcCccccceEEcCC-cccceEEc---CcEEEEECCC-CEEEEEhhHcceeeE
Confidence 67888855 6777777889999743232333344322 22343433 7777766554 899999999998887
Q ss_pred EEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccc-----------eeEEEec-CCcceEEeeecCCCeEEEEeCCCcEE
Q 019326 168 HKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDA-----------KLLCELD-GKKRILCAAPGENGVLFTGGEDRSIT 235 (343)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-----------~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~ 235 (343)
..... +..+.|++++++++...+..+.+++.... ..+..+. -...|.+.+|..+ .++-.+.. .|+
T Consensus 142 i~v~~-vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~fiYtT~~-~lk 218 (443)
T PF04053_consen 142 IDVSA-VKYVIWSDDGELVALVTKDSIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED-CFIYTTSN-HLK 218 (443)
T ss_dssp ESS-E--EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT-EEEEE-TT-EEE
T ss_pred EecCC-CcEEEEECCCCEEEEEeCCeEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC-EEEEEcCC-eEE
Confidence 77664 89999999999999998888888775543 0122222 2566777777544 33333333 565
Q ss_pred EEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 236 i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
. +..|+ ...+. .-..++.=+.+.+... .+.....|+.|..+.++..
T Consensus 219 Y--l~~Ge-~~~i~-~ld~~~yllgy~~~~~---------~ly~~Dr~~~v~~~~ld~~ 264 (443)
T PF04053_consen 219 Y--LVNGE-TGIIA-HLDKPLYLLGYLPKEN---------RLYLIDRDGNVISYELDLS 264 (443)
T ss_dssp E--EETTE-EEEEE-E-SS--EEEEEETTTT---------EEEEE-TT--EEEEE--HH
T ss_pred E--EEcCC-cceEE-EcCCceEEEEEEccCC---------EEEEEECCCCEEEEEECHH
Confidence 5 33333 22222 1234556666666444 7888888988888887653
No 330
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.65 E-value=4.5e-05 Score=67.18 Aligned_cols=229 Identities=14% Similarity=0.088 Sum_probs=143.6
Q ss_pred eEEEeeCCCeEEEEEcCCCeeeeEeccCC------------CCCeE---------------EEEEeCCCCCCCCceEEEe
Q 019326 54 AAASGGTDDTIHLYDLSTSSSLGAIHHHE------------SSSVT---------------SLAFYTPQNLSVPRNLFST 106 (343)
Q Consensus 54 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------~~~v~---------------~l~~~~~~~~~~~~~l~s~ 106 (343)
.|.||+..|.++|+-+.+++.+..+.-.. +..|. .-.+|....-.++++|+.-
T Consensus 68 ~f~SgG~sG~~~v~G~PSmr~l~~ipvf~~~~~~G~G~~~esk~~l~~~~~~~~~~~gD~HHp~~s~t~g~ydGr~~fin 147 (635)
T PRK02888 68 GFWSGGHSGEVRILGLPSMRELMRIPVFNRDSATGWGITNESKKVLGEGARGGKYLNGDTHHPHMSFTDGTYDGRYLFIN 147 (635)
T ss_pred EEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHhhccccCCcccCCCcCCCcccccCCccceeEEEEe
Confidence 38899999999999999887766552110 11111 1111111111334677776
Q ss_pred eC-CCeEEEEECCCcceeeeeeec-cccEEEEE-------------------EecCCCEEEEEe-CCCeEEEEEccCCce
Q 019326 107 SA-DGFVSIFDADPFVLLTSVKVH-KKGVNDLA-------------------VHHSGKLALTVG-RDDCLAMVNLVRGRR 164 (343)
Q Consensus 107 ~~-dg~i~iwd~~~~~~~~~~~~~-~~~v~~i~-------------------~~~~~~~l~~~~-~d~~i~~wd~~~~~~ 164 (343)
.. +..|...+++.+++-+.+.-. ...+..++ +.|+|+.+...+ ..+.+.+.|..+.+.
T Consensus 148 dk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSvID~etmeV 227 (635)
T PRK02888 148 DKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTAVDAETMEV 227 (635)
T ss_pred cCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEEEECccceE
Confidence 64 556777777666654444311 11222222 344554443222 246677888888877
Q ss_pred eEEEEcCCcceEEEEeCCCCEEEEEe-----------------------------------------CCcEEEEEccc--
Q 019326 165 SFYHKIGKEASLIKFDGSGEKFFMVT-----------------------------------------EEKVGIHQAED-- 201 (343)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~i~~~d~~~-- 201 (343)
......+.....+.+++++.++++.. ++.|.+.|.++
T Consensus 228 ~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~gn~V~VID~~t~~ 307 (635)
T PRK02888 228 AWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGGSKVPVVDGRKAA 307 (635)
T ss_pred EEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECCCEEEEEECCccc
Confidence 77777777777788888888877662 13477777776
Q ss_pred ---ceeEEEecCCcceEEeeecC-CCeEE-EEeCCCcEEEEECCCCce------------eEEecccccccEEEEEEEec
Q 019326 202 ---AKLLCELDGKKRILCAAPGE-NGVLF-TGGEDRSITAWDTNSGKV------------AYCIEDAHSARVKGIVVLTK 264 (343)
Q Consensus 202 ---~~~~~~~~~~~~i~~~~~~~-~~~l~-~~~~dg~i~i~d~~~~~~------------~~~~~~~h~~~v~~~~~~~~ 264 (343)
.+.+..+.-......+.+++ +++++ ++..+.+|.++|+.+.+. ..+.+ -.......+|.++
T Consensus 308 ~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaeve--vGlGPLHTaFDg~ 385 (635)
T PRK02888 308 NAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPE--LGLGPLHTAFDGR 385 (635)
T ss_pred cCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeec--cCCCcceEEECCC
Confidence 45666666666677788874 55554 555689999999987553 34444 2334455677666
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 265 NDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 265 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
+. ...|--.|..|-.||+..
T Consensus 386 G~---------aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 386 GN---------AYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CC---------EEEeEeecceeEEEehHH
Confidence 54 788888999999999987
No 331
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.65 E-value=6.9e-06 Score=71.58 Aligned_cols=149 Identities=16% Similarity=0.137 Sum_probs=99.4
Q ss_pred eEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEec-cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCccee
Q 019326 45 ITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIH-HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL 123 (343)
Q Consensus 45 v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 123 (343)
.+|++-++.+++.|+.-|.+.+|+-..++....-. +. .+.+..+..+++. .++++|+..|.|.++.+....+.
T Consensus 38 lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~-~~~~~~~~vs~~e-----~lvAagt~~g~V~v~ql~~~~p~ 111 (726)
T KOG3621|consen 38 LTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGA-TGITCVRSVSSVE-----YLVAAGTASGRVSVFQLNKELPR 111 (726)
T ss_pred EEEeecCCceEEEecccceEEEEecCchhhhcccccCc-cceEEEEEecchh-----HhhhhhcCCceEEeehhhccCCC
Confidence 44555559999999999999999987765443322 23 4666777788877 68888899999999987543221
Q ss_pred ---e--ee-eeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc-----eeEEEEcCCcceEEEEeCCCCEEEEEeCC
Q 019326 124 ---T--SV-KVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR-----RSFYHKIGKEASLIKFDGSGEKFFMVTEE 192 (343)
Q Consensus 124 ---~--~~-~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (343)
. .. +.|...|++++|++++..+++|...|+|..-.+.... .......+.. .+.++--..+++++.-.
T Consensus 112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~--IVQlD~~q~~LLVStl~ 189 (726)
T KOG3621|consen 112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSE--IVQLDYLQSYLLVSTLT 189 (726)
T ss_pred cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcc--eEEeecccceehHhhhh
Confidence 1 11 2367899999999999999999999999998887721 1111122233 34444444555555434
Q ss_pred cEEEEEccc
Q 019326 193 KVGIHQAED 201 (343)
Q Consensus 193 ~i~~~d~~~ 201 (343)
...+++.+.
T Consensus 190 r~~Lc~tE~ 198 (726)
T KOG3621|consen 190 RCILCQTEA 198 (726)
T ss_pred hhheeecch
Confidence 444455443
No 332
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=98.60 E-value=9e-05 Score=62.11 Aligned_cols=224 Identities=15% Similarity=0.137 Sum_probs=130.1
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCC--CCCceEEEeeC----------CCeEEEEECCCc----ceeee
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNL--SVPRNLFSTSA----------DGFVSIFDADPF----VLLTS 125 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~--~~~~~l~s~~~----------dg~i~iwd~~~~----~~~~~ 125 (343)
..|++.|..+.+.+..+.-.....+.+++...-... ....+|+.|+. .|.|.++++... ..+..
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 468899988888777665443456666554331100 01267887765 288999999873 12222
Q ss_pred e--eeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc-eeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEccc
Q 019326 126 V--KVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR-RSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAED 201 (343)
Q Consensus 126 ~--~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~ 201 (343)
+ ....++|.+++-- ++. |+++. ++.|.+|++...+ ..............+....+++++++ ....+.++..+.
T Consensus 82 i~~~~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~ 158 (321)
T PF03178_consen 82 IHSTEVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDE 158 (321)
T ss_dssp EEEEEESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEET
T ss_pred EEEEeecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEc
Confidence 1 2346789998877 344 44433 4799999999888 55555555555666666667788888 677777765443
Q ss_pred -ceeEEEec---CCcceEEeeec-CCCeEEEEeCCCcEEEEECCC-------Cc-eeEE-ecccccccEEEE---EEEec
Q 019326 202 -AKLLCELD---GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNS-------GK-VAYC-IEDAHSARVKGI---VVLTK 264 (343)
Q Consensus 202 -~~~~~~~~---~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~-------~~-~~~~-~~~~h~~~v~~~---~~~~~ 264 (343)
...+..+. ....++++.+- +++.+++++.+|.+.++.... +. .+.. ........|+++ .+.+.
T Consensus 159 ~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~ 238 (321)
T PF03178_consen 159 ENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPR 238 (321)
T ss_dssp TTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--
T ss_pred cCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeec
Confidence 22232222 45667888776 556999999999999998763 22 2221 221245677877 33332
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 265 NDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 265 ~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
......+....++-++.+|.|.+.
T Consensus 239 -~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 239 -SGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp -SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred -CCCCcccccceEEEEecCCEEEEE
Confidence 000001112358888899998844
No 333
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=98.60 E-value=5.2e-05 Score=63.55 Aligned_cols=193 Identities=12% Similarity=0.149 Sum_probs=125.4
Q ss_pred CeEEEEECCCcceeeeeeeccc-cEEEEE---EecC----CCEEEEEeC---------C-CeEEEEEccCC-----c--e
Q 019326 110 GFVSIFDADPFVLLTSVKVHKK-GVNDLA---VHHS----GKLALTVGR---------D-DCLAMVNLVRG-----R--R 164 (343)
Q Consensus 110 g~i~iwd~~~~~~~~~~~~~~~-~v~~i~---~~~~----~~~l~~~~~---------d-~~i~~wd~~~~-----~--~ 164 (343)
+.|++.|..+.+.+.++.-... .+.+++ +..+ ..++++|.. . |.|.++++... + .
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 3688889888887777664332 444444 3322 457776654 2 88999999884 2 2
Q ss_pred eEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccce-eEEEec--CCcceEEeeecCCCeEEEEeCCCcEEEEECCC
Q 019326 165 SFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAK-LLCELD--GKKRILCAAPGENGVLFTGGEDRSITAWDTNS 241 (343)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~ 241 (343)
+.....++++.+++-- +..++++.++.+.+|++...+ ....-. .+..+.++.. -+++++.|+.-..+.++..+.
T Consensus 82 i~~~~~~g~V~ai~~~--~~~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~-~~~~I~vgD~~~sv~~~~~~~ 158 (321)
T PF03178_consen 82 IHSTEVKGPVTAICSF--NGRLVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV-FKNYILVGDAMKSVSLLRYDE 158 (321)
T ss_dssp EEEEEESS-EEEEEEE--TTEEEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE-ETTEEEEEESSSSEEEEEEET
T ss_pred EEEEeecCcceEhhhh--CCEEEEeecCEEEEEEccCcccchhhheecceEEEEEEec-cccEEEEEEcccCEEEEEEEc
Confidence 3445567778777766 455888889999999999887 444333 4446677766 356899999888888875543
Q ss_pred -CceeEEec-ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc---c---CCCcccccccccceeE
Q 019326 242 -GKVAYCIE-DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK---E---KPLPLAEAKTNSRLTC 313 (343)
Q Consensus 242 -~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~---~---~~~~~~~~~~~~~i~~ 313 (343)
...+..+. +.....++++.+.++++ .++.+..+|.+.++....... . .......++.+..|++
T Consensus 159 ~~~~l~~va~d~~~~~v~~~~~l~d~~---------~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~ 229 (321)
T PF03178_consen 159 ENNKLILVARDYQPRWVTAAEFLVDED---------TIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNS 229 (321)
T ss_dssp TTE-EEEEEEESS-BEEEEEEEE-SSS---------EEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEE
T ss_pred cCCEEEEEEecCCCccEEEEEEecCCc---------EEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccce
Confidence 22233322 23456788888886655 899999999999998874311 1 2234567788888988
Q ss_pred E
Q 019326 314 L 314 (343)
Q Consensus 314 ~ 314 (343)
+
T Consensus 230 ~ 230 (321)
T PF03178_consen 230 F 230 (321)
T ss_dssp E
T ss_pred E
Confidence 8
No 334
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.55 E-value=0.00027 Score=57.66 Aligned_cols=189 Identities=15% Similarity=0.190 Sum_probs=118.6
Q ss_pred CceEEEe--eCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC-Ccceeeeee-
Q 019326 52 GTAAASG--GTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD-PFVLLTSVK- 127 (343)
Q Consensus 52 ~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~- 127 (343)
+++++.. +-...|.|-|+...+.+.++... + ...+ .|.+ +.-|.+-+.||.+.-..++ .++......
T Consensus 106 gk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P--G-C~~i--yP~~----~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~ 176 (342)
T PF06433_consen 106 GKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP--G-CWLI--YPSG----NRGFSMLCGDGSLLTVTLDADGKEAQKSTK 176 (342)
T ss_dssp SSEEEEEEESSSEEEEEEETTTTEEEEEEEGT--S-EEEE--EEEE----TTEEEEEETTSCEEEEEETSTSSEEEEEEE
T ss_pred CcEEEEEccCCCCeEEEEECCCCceeeeecCC--C-EEEE--EecC----CCceEEEecCCceEEEEECCCCCEeEeecc
Confidence 4444443 22345777777777877777644 2 2222 2333 1468899999999999886 455442221
Q ss_pred ---eccccE-EEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-------------CCcceEEEEeCCCCEEEEE-
Q 019326 128 ---VHKKGV-NDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-------------GKEASLIKFDGSGEKFFMV- 189 (343)
Q Consensus 128 ---~~~~~v-~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~- 189 (343)
....++ ..-++...+..++-.+.+|.|+--|+........... ++.-..+++++..+++++.
T Consensus 177 ~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLM 256 (342)
T PF06433_consen 177 VFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLM 256 (342)
T ss_dssp ESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEE
T ss_pred ccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEe
Confidence 111222 2233444555666678899999999877664333222 1223458888877766666
Q ss_pred eCC----------cEEEEEcccceeEEEecCCcceEEeeecC-C-CeEEEE-eCCCcEEEEECCCCceeEEec
Q 019326 190 TEE----------KVGIHQAEDAKLLCELDGKKRILCAAPGE-N-GVLFTG-GEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 190 ~~~----------~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~~~-~~dg~i~i~d~~~~~~~~~~~ 249 (343)
..+ .|.++|+.+++.+..+....++.++..+. . -+|++. ..++.+.+||..+|+.+.++.
T Consensus 257 h~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 257 HQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp EE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred cCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence 321 38889999999999999777888888873 3 366554 468999999999999998887
No 335
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.54 E-value=7.1e-05 Score=69.48 Aligned_cols=193 Identities=10% Similarity=0.064 Sum_probs=125.4
Q ss_pred CCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC-
Q 019326 42 LSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD- 118 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~- 118 (343)
.+.|.++.|. ++.++.+..+|.|.+-|..+.... +-+.....|.+++|+|+. +.++..+..+++.+-.-.
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e--ivg~vd~GI~aaswS~De-----e~l~liT~~~tll~mT~~f 140 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELE--IVGNVDNGISAASWSPDE-----ELLALITGRQTLLFMTKDF 140 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEccccccee--eeeeccCceEEEeecCCC-----cEEEEEeCCcEEEEEeccc
Confidence 3679999988 778888888999999988765432 222226889999999999 788888888887765420
Q ss_pred ---C-------------------cceeeeeeecc---------------------ccEEEEEEecCCCEEEEEe-----C
Q 019326 119 ---P-------------------FVLLTSVKVHK---------------------KGVNDLAVHHSGKLALTVG-----R 150 (343)
Q Consensus 119 ---~-------------------~~~~~~~~~~~---------------------~~v~~i~~~~~~~~l~~~~-----~ 150 (343)
. |+.-..+++.. +.=.+|.|--||.++++.. .
T Consensus 141 ~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~ 220 (1265)
T KOG1920|consen 141 EPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETG 220 (1265)
T ss_pred cchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCC
Confidence 0 11111222111 1123588999999988832 2
Q ss_pred CCeEEEEEccCCceeE-EEEcCCcceEEEEeCCCCEEEEE----eCCcEEEEEccc---ceeEEEec-CCcceEEeeec-
Q 019326 151 DDCLAMVNLVRGRRSF-YHKIGKEASLIKFDGSGEKFFMV----TEEKVGIHQAED---AKLLCELD-GKKRILCAAPG- 220 (343)
Q Consensus 151 d~~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~d~~~---~~~~~~~~-~~~~i~~~~~~- 220 (343)
...|++||-+ |..-. ..+....-.+++|-|.|..+++. +++.|.+|.-+. +.....++ ...++..++|+
T Consensus 221 ~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns 299 (1265)
T KOG1920|consen 221 TRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNS 299 (1265)
T ss_pred ceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecC
Confidence 3789999976 43211 12223445679999999999887 456688887443 22222223 33448999998
Q ss_pred CCCeEEE---EeCCCcEEEEECCCC
Q 019326 221 ENGVLFT---GGEDRSITAWDTNSG 242 (343)
Q Consensus 221 ~~~~l~~---~~~dg~i~i~d~~~~ 242 (343)
++..|++ ......|++|-+.+-
T Consensus 300 ~sdiLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 300 NSDILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred CCCceeeeecccccceEEEEEecCe
Confidence 4556665 344445999988764
No 336
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.53 E-value=6.1e-05 Score=64.15 Aligned_cols=230 Identities=15% Similarity=0.090 Sum_probs=124.7
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc-------------------------------------------
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV------------------------------------------- 121 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------------------------------------------- 121 (343)
.|+.+.|.+.. ..|++|...|.|.+|.....+
T Consensus 3 ~v~~vs~a~~t-----~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~ 77 (395)
T PF08596_consen 3 SVTHVSFAPET-----LELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFL 77 (395)
T ss_dssp -EEEEEEETTT-----TEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEE
T ss_pred eEEEEEecCCC-----ceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccC
Confidence 57889999887 689999999999988652110
Q ss_pred eeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCC---------cceEEEEe-----CCC---C
Q 019326 122 LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGK---------EASLIKFD-----GSG---E 184 (343)
Q Consensus 122 ~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~---------~~~~~~~~-----~~~---~ 184 (343)
+..-+....++|++++.+.- .+++.|..+|.+.+.|+|....+....... .+.++.|. .++ -
T Consensus 78 P~~l~~~~~g~vtal~~S~i-GFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi 156 (395)
T PF08596_consen 78 PLTLLDAKQGPVTALKNSDI-GFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSI 156 (395)
T ss_dssp EEEEE---S-SEEEEEE-BT-SEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEE
T ss_pred chhheeccCCcEeEEecCCC-cEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccce
Confidence 11112224578999998754 489999999999999998877776654433 35566664 233 3
Q ss_pred EEEEE-eCCcEEEEEccc---ceeE----EEe-cCCcceEEeeec-------------------CC---CeEEEEeCCCc
Q 019326 185 KFFMV-TEEKVGIHQAED---AKLL----CEL-DGKKRILCAAPG-------------------EN---GVLFTGGEDRS 233 (343)
Q Consensus 185 ~~~~~-~~~~i~~~d~~~---~~~~----~~~-~~~~~i~~~~~~-------------------~~---~~l~~~~~dg~ 233 (343)
.++++ ..|.+.+|.+.- +... ... .+..++..+..- .+ .-++....+..
T Consensus 157 ~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~ 236 (395)
T PF08596_consen 157 CLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESD 236 (395)
T ss_dssp EEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSE
T ss_pred EEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccc
Confidence 56666 789999997641 2111 111 244454443321 00 12334445678
Q ss_pred EEEEECCCCceeEEecccccccEEEEEEEe-----cCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccc
Q 019326 234 ITAWDTNSGKVAYCIEDAHSARVKGIVVLT-----KNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTN 308 (343)
Q Consensus 234 i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~-----~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 308 (343)
++++...+.+...... ........+.+.+ .+. .|++-..+|.|+++.+...+......+......
T Consensus 237 irv~~~~~~k~~~K~~-~~~~~~~~~~vv~~~~~~~~~---------~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~ 306 (395)
T PF08596_consen 237 IRVFKPPKSKGAHKSF-DDPFLCSSASVVPTISRNGGY---------CLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDS 306 (395)
T ss_dssp EEEE-TT---EEEEE--SS-EEEEEEEEEEEE-EEEEE---------EEEEEETTSEEEEEETTT--EEEEEE-SS---H
T ss_pred eEEEeCCCCcccceee-ccccccceEEEEeecccCCce---------EEEEEECCCcEEEEECCCchHhhcccCCCcccc
Confidence 9999998877665554 3333344444432 222 788889999999999987643332222221122
Q ss_pred cceeEEEcCCCCceeccccCCC
Q 019326 309 SRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 309 ~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
..+....++++|.++.+....+
T Consensus 307 ~~~~~ssis~~Gdi~~~~gpsE 328 (395)
T PF08596_consen 307 RRLSSSSISRNGDIFYWTGPSE 328 (395)
T ss_dssp HHHTT-EE-TTS-EEEE-SSSE
T ss_pred ccccccEECCCCCEEEEeCccc
Confidence 2344566677777766654433
No 337
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.51 E-value=1.5e-05 Score=64.89 Aligned_cols=221 Identities=13% Similarity=0.110 Sum_probs=127.6
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCe-eeeEe
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSS-SLGAI 78 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~-~~~~~ 78 (343)
|..++.++.|+|.|+++ ...+..+..| .++.+++|+ .++++.|...|.|.+||+...+ .+..+
T Consensus 209 l~~asl~nkiki~dlet------------~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~ 275 (463)
T KOG1645|consen 209 LGLASLGNKIKIMDLET------------SCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMEL 275 (463)
T ss_pred eeeeccCceEEEEeccc------------ceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCCchHhhh
Confidence 56788899999999987 4556666666 889999998 6789999999999999998653 22223
Q ss_pred cc-CCCCCeEEEEEeCCCCC-CCCceEEEeeCCCeEEEEECC----CcceeeeeeeccccEEEEEEecCCCEEEEEeCC-
Q 019326 79 HH-HESSSVTSLAFYTPQNL-SVPRNLFSTSADGFVSIFDAD----PFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD- 151 (343)
Q Consensus 79 ~~-~~~~~v~~l~~~~~~~~-~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d- 151 (343)
.. -...+|..++..+.... ..+.+|+....+ +..|++. ...++..+. ..+...++..++..+.++.....
T Consensus 276 ~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele-~pG~cismqy~~~snh~l~tyRs~ 352 (463)
T KOG1645|consen 276 VANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELE-PPGICISMQYHGVSNHLLLTYRSN 352 (463)
T ss_pred hhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccC-CCcceeeeeecCccceEEEEecCC
Confidence 22 11345555544333210 001244443332 4456552 222222222 24556666666655544444332
Q ss_pred C------eEEE-EEccCCceeEEEEc---CC------cceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEecCCcc
Q 019326 152 D------CLAM-VNLVRGRRSFYHKI---GK------EASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELDGKKR 213 (343)
Q Consensus 152 ~------~i~~-wd~~~~~~~~~~~~---~~------~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~ 213 (343)
. .+.. -|-..|..+..... +. .-..+.-.++.++++.. ..+.+.+||..+.+.++++....+
T Consensus 353 pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~~ep 432 (463)
T KOG1645|consen 353 PNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQTLALSEP 432 (463)
T ss_pred CCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEeccchhheeeecccCcc
Confidence 1 0111 12222322221111 10 01112223445555555 667899999999999999998899
Q ss_pred eEEeeec--CC-CeEEEEeCCCcEEEEECC
Q 019326 214 ILCAAPG--EN-GVLFTGGEDRSITAWDTN 240 (343)
Q Consensus 214 i~~~~~~--~~-~~l~~~~~dg~i~i~d~~ 240 (343)
+..++.. ++ .+|++- .|..++||..+
T Consensus 433 v~Dicp~~~n~~syLa~L-Td~~v~Iyk~e 461 (463)
T KOG1645|consen 433 VLDICPNDTNGSSYLALL-TDDRVHIYKNE 461 (463)
T ss_pred eeecceeecCCcchhhhe-ecceEEEEecC
Confidence 9998876 33 355544 46678888654
No 338
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.50 E-value=0.00037 Score=56.91 Aligned_cols=216 Identities=14% Similarity=0.143 Sum_probs=121.0
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC----------CCeEEEEECCCcceeeeeeeccc
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA----------DGFVSIFDADPFVLLTSVKVHKK 131 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~ 131 (343)
+.+.++|.++++.+..+... -.-.+..+|++ +.+++++. .-.|.+||..+.+....+.-...
T Consensus 17 ~rv~viD~d~~k~lGmi~~g---~~~~~~~spdg-----k~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k 88 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTG---FLGNVALSPDG-----KTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPK 88 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEE---SSEEEEE-TTS-----SEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS
T ss_pred ceEEEEECCCCcEEEEeecc---cCCceeECCCC-----CEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCc
Confidence 46888998888888777643 33346678888 56665432 34688999988777766553322
Q ss_pred -------cEEEEEEecCCCEEEEEeC--CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcc-c
Q 019326 132 -------GVNDLAVHHSGKLALTVGR--DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAE-D 201 (343)
Q Consensus 132 -------~v~~i~~~~~~~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-~ 201 (343)
....++++.++++++.... -..|.+.|+..++.+.....++.....-..+. .+...|.||.+..+.+. .
T Consensus 89 ~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~-~F~~lC~DGsl~~v~Ld~~ 167 (342)
T PF06433_consen 89 PRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSGNR-GFSMLCGDGSLLTVTLDAD 167 (342)
T ss_dssp -B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEETT-EEEEEETTSCEEEEEETST
T ss_pred chheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecCCC-ceEEEecCCceEEEEECCC
Confidence 1223566777777666543 35677788877777666665554433332222 23333355555544443 2
Q ss_pred ceeEEEec---------------------------CCcceE---------------------------------Eeeec-
Q 019326 202 AKLLCELD---------------------------GKKRIL---------------------------------CAAPG- 220 (343)
Q Consensus 202 ~~~~~~~~---------------------------~~~~i~---------------------------------~~~~~- 220 (343)
|+...+.. ..+.|. -++++
T Consensus 168 Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~ 247 (342)
T PF06433_consen 168 GKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHA 247 (342)
T ss_dssp SSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEET
T ss_pred CCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeecc
Confidence 22211110 001111 12222
Q ss_pred CCCeEEEEe---CCC-------cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEE-EcCCCcEEEE
Q 019326 221 ENGVLFTGG---EDR-------SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVAS-ASSDGVICVW 289 (343)
Q Consensus 221 ~~~~l~~~~---~dg-------~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s-~~~dg~i~vw 289 (343)
..+.|++-- .+| .|-++|+.+++.+.++. -..++.+|.++.+... +|++ ...++.|.+|
T Consensus 248 ~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~--l~~~~~Si~Vsqd~~P--------~L~~~~~~~~~l~v~ 317 (342)
T PF06433_consen 248 ASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIP--LEHPIDSIAVSQDDKP--------LLYALSAGDGTLDVY 317 (342)
T ss_dssp TTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEE--EEEEESEEEEESSSS---------EEEEEETTTTEEEEE
T ss_pred ccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEe--CCCccceEEEccCCCc--------EEEEEcCCCCeEEEE
Confidence 122222211 111 36677888888888887 3457889999887652 5554 4568999999
Q ss_pred eccCccc
Q 019326 290 DVRMAIK 296 (343)
Q Consensus 290 d~~~~~~ 296 (343)
|..+++.
T Consensus 318 D~~tGk~ 324 (342)
T PF06433_consen 318 DAATGKL 324 (342)
T ss_dssp ETTT--E
T ss_pred eCcCCcE
Confidence 9999853
No 339
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.49 E-value=4.6e-05 Score=66.64 Aligned_cols=121 Identities=16% Similarity=0.194 Sum_probs=81.8
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeee-----
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSL----- 75 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~----- 75 (343)
|+.|++-|.+++|+-... . .......+-.+.+..+..+ ..++|.|+..|.|.++-++.....
T Consensus 48 l~~GsS~G~lyl~~R~~~-------~----~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~ 116 (726)
T KOG3621|consen 48 LAMGSSAGSVYLYNRHTG-------E----MRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYV 116 (726)
T ss_pred EEEecccceEEEEecCch-------h----hhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceee
Confidence 788999999999997752 1 1122222333444445555 677888889999999988764321
Q ss_pred eEec-cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc----ceeeeeeeccccEEEEEEec
Q 019326 76 GAIH-HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF----VLLTSVKVHKKGVNDLAVHH 140 (343)
Q Consensus 76 ~~~~-~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~i~~~~ 140 (343)
.... .| ...|++++|++++ ..+++|...|+|.+-.++.. -..+.+-...+.|..+....
T Consensus 117 t~~d~~~-~~rVTal~Ws~~~-----~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q 180 (726)
T KOG3621|consen 117 TPCDKSH-KCRVTALEWSKNG-----MKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQ 180 (726)
T ss_pred ccccccC-CceEEEEEecccc-----cEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeeccc
Confidence 1122 24 7899999999999 89999999999999888762 12233333456676676653
No 340
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.48 E-value=2e-05 Score=67.65 Aligned_cols=111 Identities=15% Similarity=0.094 Sum_probs=79.6
Q ss_pred eEEEEec---CceEEEe----eCCCe----EEEEEcCCCeee--eEec-cCCCCCeEEEEEeCCCCCCCCceEEEeeCCC
Q 019326 45 ITTVAVS---GTAAASG----GTDDT----IHLYDLSTSSSL--GAIH-HHESSSVTSLAFYTPQNLSVPRNLFSTSADG 110 (343)
Q Consensus 45 v~~l~~~---~~~l~s~----~~dg~----i~iwd~~~~~~~--~~~~-~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg 110 (343)
..++.|+ +..+.|. +.+|. -++|++..++.. .... .. .+.|.+++++|+. +.|+.|+.||
T Consensus 208 Pl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL-~s~v~~ca~sp~E-----~kLvlGC~Dg 281 (545)
T PF11768_consen 208 PLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPL-PSQVICCARSPSE-----DKLVLGCEDG 281 (545)
T ss_pred cEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEec-CCcceEEecCccc-----ceEEEEecCC
Confidence 4566776 4555543 23343 345666554322 2222 23 6889999999999 8999999999
Q ss_pred eEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc
Q 019326 111 FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR 163 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~ 163 (343)
+|.+||...+. ..+....-.++.++|+|+|..+++|+..|.+.+||+.-+.
T Consensus 282 SiiLyD~~~~~--t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 282 SIILYDTTRGV--TLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP 332 (545)
T ss_pred eEEEEEcCCCe--eeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence 99999987642 2233344567899999999999999999999999986544
No 341
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.45 E-value=1.3e-07 Score=81.14 Aligned_cols=194 Identities=18% Similarity=0.149 Sum_probs=132.7
Q ss_pred CCCeEEEEec----CceEEEeeCCCeEEEEEcCCCeee-eE-eccCCCCCeEEEEEeCCCCCCCCceEEEeeC----CCe
Q 019326 42 LSPITTVAVS----GTAAASGGTDDTIHLYDLSTSSSL-GA-IHHHESSSVTSLAFYTPQNLSVPRNLFSTSA----DGF 111 (343)
Q Consensus 42 ~~~v~~l~~~----~~~l~s~~~dg~i~iwd~~~~~~~-~~-~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~----dg~ 111 (343)
...+.|+++. ...++.|..+|.|-+-.+.....- ++ ..++ ....++++|++-. .+.|++|-. |..
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~-ar~Ct~lAwneLD----tn~LAagldkhrnds~ 130 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGY-ARPCTSLAWNELD----TNHLAAGLDKHRNDSS 130 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccc-ccccccccccccc----HHHHHhhhhhhcccCC
Confidence 4567888876 257899999999999887654222 33 3445 7889999999875 256776643 568
Q ss_pred EEEEECCCc--ceee--eeee-ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeC-CCCE
Q 019326 112 VSIFDADPF--VLLT--SVKV-HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDG-SGEK 185 (343)
Q Consensus 112 i~iwd~~~~--~~~~--~~~~-~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 185 (343)
+.|||+.++ .+.. .+.+ -.....+++|..+.+.+++|.....+.++|++.............+..+.++| ...+
T Consensus 131 ~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY 210 (783)
T KOG1008|consen 131 LKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNY 210 (783)
T ss_pred ccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCc
Confidence 999999765 2222 2222 23456689999888999999999999999998543222222234566788888 7778
Q ss_pred EEEEeCCcEEEEE-cccce-eEEEecC-----CcceEEeeecC--CCeEEEEeC-CCcEEEEECC
Q 019326 186 FFMVTEEKVGIHQ-AEDAK-LLCELDG-----KKRILCAAPGE--NGVLFTGGE-DRSITAWDTN 240 (343)
Q Consensus 186 ~~~~~~~~i~~~d-~~~~~-~~~~~~~-----~~~i~~~~~~~--~~~l~~~~~-dg~i~i~d~~ 240 (343)
++...++.+.+|| .++.+ ++..+.+ ...+..++|.+ .+.+++... .++|+++|+.
T Consensus 211 ~cs~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 211 FCSNSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred eeccccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 7777999999999 44332 2222222 23488888884 346666655 5789999985
No 342
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.45 E-value=0.00048 Score=59.49 Aligned_cols=88 Identities=20% Similarity=0.292 Sum_probs=68.6
Q ss_pred EEEEccccee----EEEecCCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCC
Q 019326 195 GIHQAEDAKL----LCELDGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGS 269 (343)
Q Consensus 195 ~~~d~~~~~~----~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 269 (343)
.+|+....+. +..++.+..+.|+++++ +..++.|+.||.|.+||...+..... . +.-.++.++|+|++.
T Consensus 239 ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-k--a~~~P~~iaWHp~ga--- 312 (545)
T PF11768_consen 239 CIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-K--AEFIPTLIAWHPDGA--- 312 (545)
T ss_pred EEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-e--ecccceEEEEcCCCc---
Confidence 4566654432 33455888999999984 57999999999999999986643322 3 456788999999998
Q ss_pred CCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 270 TAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 270 ~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
+++.|+..|.+.+||+.-.
T Consensus 313 ------i~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 313 ------IFVVGSEQGELQCFDMALS 331 (545)
T ss_pred ------EEEEEcCCceEEEEEeecC
Confidence 9999999999999999754
No 343
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.41 E-value=0.00018 Score=66.97 Aligned_cols=195 Identities=14% Similarity=0.197 Sum_probs=127.4
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc---
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL--- 159 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~--- 159 (343)
...|.++.|..+. ..++.+..+|.|.+-|..+... ...-.-...|.+++|+||+..++..+..+++.+-+-
T Consensus 68 d~~i~s~~fl~d~-----~~i~v~~~~G~iilvd~et~~~-eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~ 141 (1265)
T KOG1920|consen 68 DDEIVSVQFLADT-----NSICVITALGDIILVDPETLEL-EIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFE 141 (1265)
T ss_pred CcceEEEEEeccc-----ceEEEEecCCcEEEEcccccce-eeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEecccc
Confidence 4689999999888 7888999999999998877442 222234568999999999999999988888766542
Q ss_pred -cCCcee-------------------EEEE----------------------cCCcceEEEEeCCCCEEEEE-----eC-
Q 019326 160 -VRGRRS-------------------FYHK----------------------IGKEASLIKFDGSGEKFFMV-----TE- 191 (343)
Q Consensus 160 -~~~~~~-------------------~~~~----------------------~~~~~~~~~~~~~~~~~~~~-----~~- 191 (343)
-..+.+ ..+. ....-..+.|.-+|+++++. .+
T Consensus 142 ~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~ 221 (1265)
T KOG1920|consen 142 PIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGT 221 (1265)
T ss_pred chhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCc
Confidence 111111 0000 01122348999999999984 34
Q ss_pred CcEEEEEcccceeEEE-ecCCcceEEeeecC-CCeEEEE---eCCCcEEEEECCC---CceeEEecccccccEEEEEEEe
Q 019326 192 EKVGIHQAEDAKLLCE-LDGKKRILCAAPGE-NGVLFTG---GEDRSITAWDTNS---GKVAYCIEDAHSARVKGIVVLT 263 (343)
Q Consensus 192 ~~i~~~d~~~~~~~~~-~~~~~~i~~~~~~~-~~~l~~~---~~dg~i~i~d~~~---~~~~~~~~~~h~~~v~~~~~~~ 263 (343)
..+++||.+ +.+-.. .+..+--.+++|-| |..+++- ..|+.|.+|..+- ++....++ .....|..++|+.
T Consensus 222 RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p-~de~~ve~L~Wns 299 (1265)
T KOG1920|consen 222 RKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFP-LDEKEVEELAWNS 299 (1265)
T ss_pred eeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCc-ccccchheeeecC
Confidence 789999987 332211 11233345677765 4455543 3466798887542 22222233 3344599999999
Q ss_pred cCCCCCCCCCCeEEEE---EcCCCcEEEEeccCc
Q 019326 264 KNDGGSTAENPYLVAS---ASSDGVICVWDVRMA 294 (343)
Q Consensus 264 ~~~~~~~~~~~~~l~s---~~~dg~i~vwd~~~~ 294 (343)
++. .|+. ......|++|-+.+-
T Consensus 300 ~sd---------iLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 300 NSD---------ILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred CCC---------ceeeeecccccceEEEEEecCe
Confidence 987 7776 445556999998764
No 344
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=98.38 E-value=0.0008 Score=55.09 Aligned_cols=219 Identities=15% Similarity=0.158 Sum_probs=122.5
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEe-
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAI- 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~- 78 (343)
+|+.|+.+| |++++.... .. ...+. +..+|..+... -+.|++- .|+.+.++++.........
T Consensus 9 ~L~vGt~~G-l~~~~~~~~------~~---~~~i~----~~~~I~ql~vl~~~~~llvL-sd~~l~~~~L~~l~~~~~~~ 73 (275)
T PF00780_consen 9 RLLVGTEDG-LYVYDLSDP------SK---PTRIL----KLSSITQLSVLPELNLLLVL-SDGQLYVYDLDSLEPVSTSA 73 (275)
T ss_pred EEEEEECCC-EEEEEecCC------cc---ceeEe----ecceEEEEEEecccCEEEEE-cCCccEEEEchhhccccccc
Confidence 588999988 899998321 01 11111 22338888877 2444443 3599999998865433311
Q ss_pred ------------ccCCCCCeEEEE--EeCCCCCCCCceEEEeeCCCeEEEEECCCc-----ceeeeeeeccccEEEEEEe
Q 019326 79 ------------HHHESSSVTSLA--FYTPQNLSVPRNLFSTSADGFVSIFDADPF-----VLLTSVKVHKKGVNDLAVH 139 (343)
Q Consensus 79 ------------~~~~~~~v~~l~--~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~v~~i~~~ 139 (343)
.......+...+ -...+ ...+.......|.+|..... +..+++. -...+.+++|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~-----~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~ 147 (275)
T PF00780_consen 74 PLAFPKSRSLPTKLPETKGVSFFAVNGGHEG-----SRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL 147 (275)
T ss_pred cccccccccccccccccCCeeEEeecccccc-----ceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe
Confidence 111123444444 11222 33344444558888887542 3445555 34678899998
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCceeEEEEcCC-------------cceEEEEeCCCCEEEEEeCCcEEEEEcccceeEE
Q 019326 140 HSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGK-------------EASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLC 206 (343)
Q Consensus 140 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 206 (343)
++.++.+..+ ...+.|+.++.......... ++..+.. +++.+++ +.+..-...|. .|+..+
T Consensus 148 --~~~i~v~~~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll-~~~~~g~fv~~-~G~~~r 221 (275)
T PF00780_consen 148 --GNKICVGTSK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLL-CYDNIGVFVNK-NGEPSR 221 (275)
T ss_pred --CCEEEEEeCC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEE-EecceEEEEcC-CCCcCc
Confidence 4467777654 48889998776544432221 1222222 3344444 43433333343 343333
Q ss_pred --EecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 207 --ELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 207 --~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
.+.=...+..+.+ ...++++-.. +.|.||++.+++.++.+.
T Consensus 222 ~~~i~W~~~p~~~~~-~~pyli~~~~-~~iEV~~~~~~~lvQ~i~ 264 (275)
T PF00780_consen 222 KSTIQWSSAPQSVAY-SSPYLIAFSS-NSIEVRSLETGELVQTIP 264 (275)
T ss_pred ccEEEcCCchhEEEE-ECCEEEEECC-CEEEEEECcCCcEEEEEE
Confidence 3333345556666 3446666555 559999999999988887
No 345
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=98.37 E-value=8e-05 Score=49.98 Aligned_cols=98 Identities=19% Similarity=0.222 Sum_probs=72.3
Q ss_pred eEEEEec------CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC
Q 019326 45 ITTVAVS------GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD 118 (343)
Q Consensus 45 v~~l~~~------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 118 (343)
|++|++. .+.|++|+.|..||+|+-+ +.+.++... ..|++|.-...+ .++.+..+|+|-+|+-.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~--~~v~~L~~~~~~------~F~Y~l~NGTVGvY~~~ 71 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITET--DKVTSLCSLGGG------RFAYALANGTVGVYDRS 71 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecc--cceEEEEEcCCC------EEEEEecCCEEEEEeCc
Confidence 5666664 3789999999999999854 677777765 788889887765 79999999999999863
Q ss_pred CcceeeeeeeccccEEEEEEec-C--C-CEEEEEeCCCeEE
Q 019326 119 PFVLLTSVKVHKKGVNDLAVHH-S--G-KLALTVGRDDCLA 155 (343)
Q Consensus 119 ~~~~~~~~~~~~~~v~~i~~~~-~--~-~~l~~~~~d~~i~ 155 (343)
+.+...+. +..+.++++.. + | ..|++|-.+|.|-
T Consensus 72 --~RlWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 72 --QRLWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred --ceeeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 34455553 33456665543 2 2 5788998888764
No 346
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.34 E-value=0.00078 Score=53.40 Aligned_cols=196 Identities=13% Similarity=0.171 Sum_probs=117.5
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecc-ccEEEEEEecCCCEEEEEeCCCeEE
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHK-KGVNDLAVHHSGKLALTVGRDDCLA 155 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~~~~~d~~i~ 155 (343)
.+.+- ...++.|+|.|+.+ .++++....+.|..++.+ ++.++.+.... +..-.|++..++.++++--.++.+.
T Consensus 16 ~l~g~-~~e~SGLTy~pd~~----tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~ 89 (248)
T PF06977_consen 16 PLPGI-LDELSGLTYNPDTG----TLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLY 89 (248)
T ss_dssp E-TT---S-EEEEEEETTTT----EEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEE
T ss_pred ECCCc-cCCccccEEcCCCC----eEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEE
Confidence 44455 56699999999862 567777778899888874 67887776443 4678899988887777766789999
Q ss_pred EEEccCCc----e--eEEEEc------CCcceEEEEeCCCCEEEEE-eCCcEEEEEccc---ceeEEEec---------C
Q 019326 156 MVNLVRGR----R--SFYHKI------GKEASLIKFDGSGEKFFMV-TEEKVGIHQAED---AKLLCELD---------G 210 (343)
Q Consensus 156 ~wd~~~~~----~--~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~---~~~~~~~~---------~ 210 (343)
++++.... . ...... ......++|++.++.++++ ......+|.++. ...+.... .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (248)
T PF06977_consen 90 IFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLF 169 (248)
T ss_dssp EEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--
T ss_pred EEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccce
Confidence 99984322 1 112222 1346889999998888888 777777777764 22221111 2
Q ss_pred CcceEEeeecC--CCeEEEEeCCCcEEEEECCCCceeEEec--cc-cc-----ccEEEEEEEecCCCCCCCCCCeEEEEE
Q 019326 211 KKRILCAAPGE--NGVLFTGGEDRSITAWDTNSGKVAYCIE--DA-HS-----ARVKGIVVLTKNDGGSTAENPYLVASA 280 (343)
Q Consensus 211 ~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~-h~-----~~v~~~~~~~~~~~~~~~~~~~~l~s~ 280 (343)
-..+..+.+++ +.+++....+..|..+| .+|+++..+. .+ |. ...-+|++.+++. |+..
T Consensus 170 ~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~----------LYIv 238 (248)
T PF06977_consen 170 VRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGN----------LYIV 238 (248)
T ss_dssp SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT------------EEEE
T ss_pred eccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCC----------EEEE
Confidence 23467777774 46788888899999999 5688766554 11 11 3578899998874 5555
Q ss_pred cCCCcEEEE
Q 019326 281 SSDGVICVW 289 (343)
Q Consensus 281 ~~dg~i~vw 289 (343)
++-+..++|
T Consensus 239 sEpNlfy~f 247 (248)
T PF06977_consen 239 SEPNLFYRF 247 (248)
T ss_dssp ETTTEEEEE
T ss_pred cCCceEEEe
Confidence 566655554
No 347
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.34 E-value=0.0011 Score=56.70 Aligned_cols=215 Identities=13% Similarity=0.057 Sum_probs=123.0
Q ss_pred CeEEEEec--CceEEEeeCCCeEEEEEcCCCe-------------------------------------------eeeEe
Q 019326 44 PITTVAVS--GTAAASGGTDDTIHLYDLSTSS-------------------------------------------SLGAI 78 (343)
Q Consensus 44 ~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~-------------------------------------------~~~~~ 78 (343)
.|+.+.|. ...|++|...|.|.+|.....+ +...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 46777777 5678888888988888654221 11112
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeee--e------ccccEEEEEEec-----CC---
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK--V------HKKGVNDLAVHH-----SG--- 142 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~------~~~~v~~i~~~~-----~~--- 142 (343)
+.. .++|++++.+.-| +++.|..+|.+.|.|++....+..-. . ....|+++.|.- |+
T Consensus 83 ~~~-~g~vtal~~S~iG------Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySS 155 (395)
T PF08596_consen 83 DAK-QGPVTALKNSDIG------FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSS 155 (395)
T ss_dssp ----S-SEEEEEE-BTS------EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEE
T ss_pred ecc-CCcEeEEecCCCc------EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccc
Confidence 334 6899999999777 99999999999999998877665522 1 223677888862 22
Q ss_pred CEEEEEeCCCeEEEEEccC-C-c--ee---EEE-EcCCcceEEE-EeCC---------------------CCEEEEEeCC
Q 019326 143 KLALTVGRDDCLAMVNLVR-G-R--RS---FYH-KIGKEASLIK-FDGS---------------------GEKFFMVTEE 192 (343)
Q Consensus 143 ~~l~~~~~d~~i~~wd~~~-~-~--~~---~~~-~~~~~~~~~~-~~~~---------------------~~~~~~~~~~ 192 (343)
-.+++|...|.+.+|.+.- . . .+ ... ....++..+. ++.+ ..+++++.+.
T Consensus 156 i~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~ 235 (395)
T PF08596_consen 156 ICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSES 235 (395)
T ss_dssp EEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SS
T ss_pred eEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEccc
Confidence 5788999999999998752 1 1 11 111 1223333222 3211 1255566899
Q ss_pred cEEEEEcccceeEEEecCC-cceEEeeec------CCCeEEEEeCCCcEEEEECCCCceeEEecccc----cccEEEEEE
Q 019326 193 KVGIHQAEDAKLLCELDGK-KRILCAAPG------ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAH----SARVKGIVV 261 (343)
Q Consensus 193 ~i~~~d~~~~~~~~~~~~~-~~i~~~~~~------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h----~~~v~~~~~ 261 (343)
.++++...+.+...+.... .....+.+- .+..|++-..+|.|++|.+..-+.+..+. .+ ...+....+
T Consensus 236 ~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~-l~~~~d~~~~~~ssi 314 (395)
T PF08596_consen 236 DIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVS-LPPPLDSRRLSSSSI 314 (395)
T ss_dssp EEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE--SS---HHHHTT-EE
T ss_pred ceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhccc-CCCccccccccccEE
Confidence 9999999988776655422 222222231 34577778899999999999988887776 32 234455566
Q ss_pred EecCC
Q 019326 262 LTKND 266 (343)
Q Consensus 262 ~~~~~ 266 (343)
+++++
T Consensus 315 s~~Gd 319 (395)
T PF08596_consen 315 SRNGD 319 (395)
T ss_dssp -TTS-
T ss_pred CCCCC
Confidence 76665
No 348
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=98.33 E-value=0.00081 Score=53.07 Aligned_cols=191 Identities=14% Similarity=0.084 Sum_probs=126.3
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC--eEEEEECCCcceeeeeeeccc-cEEEEEEecCCCEEEEEeC
Q 019326 74 SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG--FVSIFDADPFVLLTSVKVHKK-GVNDLAVHHSGKLALTVGR 150 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~-~v~~i~~~~~~~~l~~~~~ 150 (343)
.+.++......-...+.|..++ .++-+.+.-| .|+.+|+.+++.......... ---.++...+ +.....=.
T Consensus 35 vv~~ypHd~~aFTQGL~~~~~g-----~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d-~l~qLTWk 108 (264)
T PF05096_consen 35 VVETYPHDPTAFTQGLEFLDDG-----TLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGD-KLYQLTWK 108 (264)
T ss_dssp EEEEEE--TT-EEEEEEEEETT-----EEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETT-EEEEEESS
T ss_pred EEEECCCCCcccCccEEecCCC-----EEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECC-EEEEEEec
Confidence 4445543324456678886676 5777777766 799999999987766553322 2233444433 34444556
Q ss_pred CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec---CC---cceEEeeecCCC
Q 019326 151 DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD---GK---KRILCAAPGENG 223 (343)
Q Consensus 151 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~---~~---~~i~~~~~~~~~ 223 (343)
++...+||..+.+.+..+..+..-..++ .++..++.+ ....+..+|..+.+..+.+. .. ..++-+.+.++.
T Consensus 109 ~~~~f~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~ 186 (264)
T PF05096_consen 109 EGTGFVYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGK 186 (264)
T ss_dssp SSEEEEEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTE
T ss_pred CCeEEEEccccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCE
Confidence 8999999999999988888888777777 467777777 88999999999988877776 22 345667776666
Q ss_pred eEEEEeCCCcEEEEECCCCceeEEecc-----------c---ccccEEEEEEEecCCCCCCCCCCeEEEEE
Q 019326 224 VLFTGGEDRSITAWDTNSGKVAYCIED-----------A---HSARVKGIVVLTKNDGGSTAENPYLVASA 280 (343)
Q Consensus 224 ~l~~~~~dg~i~i~d~~~~~~~~~~~~-----------~---h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 280 (343)
..+=.-....|...|..+|+....+.. . ...-.++|++.+..+ .+++||
T Consensus 187 IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~--------~l~vTG 249 (264)
T PF05096_consen 187 IYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETD--------RLFVTG 249 (264)
T ss_dssp EEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTT--------EEEEEE
T ss_pred EEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCC--------EEEEEe
Confidence 666666778899999999998876640 0 134689999998876 266676
No 349
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=98.29 E-value=0.0018 Score=55.36 Aligned_cols=271 Identities=17% Similarity=0.182 Sum_probs=157.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec------C-ceEEEeeCCCeEEEEEcCCC--
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS------G-TAAASGGTDDTIHLYDLSTS-- 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~------~-~~l~s~~~dg~i~iwd~~~~-- 72 (343)
+|++|+..|.++||+....+. +........ .-..||..++.. . ..||. -.-..+.+|.+...
T Consensus 39 ~IivGS~~G~LrIy~P~~~~~-----~~~~lllE~---~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g 109 (418)
T PF14727_consen 39 KIIVGSYSGILRIYDPSGNEF-----QPEDLLLET---QLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDG 109 (418)
T ss_pred EEEEeccccEEEEEccCCCCC-----CCccEEEEE---ecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCC
Confidence 689999999999999854211 111111111 235788888763 2 33444 45677888887321
Q ss_pred e-------eeeEeccC-CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCE
Q 019326 73 S-------SLGAIHHH-ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKL 144 (343)
Q Consensus 73 ~-------~~~~~~~~-~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 144 (343)
. .+..+..| -......+++-|-+......++..=+.||.+.+|+-+.......+.. ---...+.+.+....
T Consensus 110 ~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDs 188 (418)
T PF14727_consen 110 TVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDS 188 (418)
T ss_pred CcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCE
Confidence 1 12222222 12344455555544332236888999999999999876443333332 112234678888889
Q ss_pred EEEEeCCCeEEEEEccC--------------------Cc---eeEEEEcCCcceEEE---EeCCCCEEEEEeCCcEEEEE
Q 019326 145 ALTVGRDDCLAMVNLVR--------------------GR---RSFYHKIGKEASLIK---FDGSGEKFFMVTEEKVGIHQ 198 (343)
Q Consensus 145 l~~~~~d~~i~~wd~~~--------------------~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~d 198 (343)
|++++.+..+.-|.... ++ ....+..+..+..+. ++.....+++-....+.+.+
T Consensus 189 fvt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvLger~Lf~l~ 268 (418)
T PF14727_consen 189 FVTASSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVLGERSLFCLK 268 (418)
T ss_pred EEEecCceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCCceEEEEecceEEEEc
Confidence 99999988888886521 11 112334445544433 33344455555777787777
Q ss_pred cccceeEEEecCCcceEEeeec-------CC--CeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCC-CC
Q 019326 199 AEDAKLLCELDGKKRILCAAPG-------EN--GVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKND-GG 268 (343)
Q Consensus 199 ~~~~~~~~~~~~~~~i~~~~~~-------~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~ 268 (343)
. +|......+......|++.. ++ ..++.++.++++.||.- .+.++.-. ....+| ++....-.. .+
T Consensus 269 ~-~G~l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d--~~L~WsA~-l~~~PV-al~v~~~~~~~G 343 (418)
T PF14727_consen 269 D-NGSLRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYED--TTLVWSAQ-LPHVPV-ALSVANFNGLKG 343 (418)
T ss_pred C-CCeEEEEEecCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEeC--CeEEEecC-CCCCCE-EEEecccCCCCc
Confidence 6 45665555555554444421 12 24888999999999963 34455444 222333 343332111 11
Q ss_pred CCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 269 STAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 269 ~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.|++-+.+|.+.+-=+.+.
T Consensus 344 -------~IV~Ls~~G~L~v~YLGTd 362 (418)
T PF14727_consen 344 -------LIVSLSDEGQLSVSYLGTD 362 (418)
T ss_pred -------eEEEEcCCCcEEEEEeCCC
Confidence 8999999999999877765
No 350
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=98.27 E-value=3.5e-05 Score=70.26 Aligned_cols=139 Identities=17% Similarity=0.230 Sum_probs=102.1
Q ss_pred CEEEEE-eCCCeEEEEEccCCceeEEEEcCCcceEEEEeCC-------CCEEEEE-eCCcEEEEEcccce--eEE----E
Q 019326 143 KLALTV-GRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGS-------GEKFFMV-TEEKVGIHQAEDAK--LLC----E 207 (343)
Q Consensus 143 ~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~i~~~d~~~~~--~~~----~ 207 (343)
++|+.- .....|+-.|++.|+.+........+....+.|+ ....++| .++.+..||.+-.. ++. .
T Consensus 494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~ 573 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQ 573 (794)
T ss_pred ceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccc
Confidence 444443 3457899999999999999998877666666663 3344555 99999999998643 332 2
Q ss_pred ecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEE
Q 019326 208 LDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVIC 287 (343)
Q Consensus 208 ~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~ 287 (343)
+.......|++-+..++||+|+.+|.||+||-- +...++.-.+-+.+|.+|.++.+|. +|++.+ +..|.
T Consensus 574 Y~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~-g~~AKT~lp~lG~pI~~iDvt~DGk---------wilaTc-~tyLl 642 (794)
T PF08553_consen 574 YSSKNNFSCFATTEDGYIAVGSNKGDIRLYDRL-GKRAKTALPGLGDPIIGIDVTADGK---------WILATC-KTYLL 642 (794)
T ss_pred cccCCCceEEEecCCceEEEEeCCCcEEeeccc-chhhhhcCCCCCCCeeEEEecCCCc---------EEEEee-cceEE
Confidence 235566888888888999999999999999954 4444433337789999999999987 655554 56788
Q ss_pred EEecc
Q 019326 288 VWDVR 292 (343)
Q Consensus 288 vwd~~ 292 (343)
+++..
T Consensus 643 Li~t~ 647 (794)
T PF08553_consen 643 LIDTL 647 (794)
T ss_pred EEEEe
Confidence 88763
No 351
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=98.23 E-value=8e-06 Score=70.33 Aligned_cols=92 Identities=14% Similarity=0.208 Sum_probs=79.5
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEE-EEEEecCCCEEEEEeCCCeEEEEEccC
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVN-DLAVHHSGKLALTVGRDDCLAMVNLVR 161 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~i~~~~~~~~l~~~~~d~~i~~wd~~~ 161 (343)
...|.-+.|+|.- .++|.+..+|.|.+..+. .+.+.++..|...++ +++|.|||+.|++|-.||+|++.|.++
T Consensus 20 ~~~i~~~ewnP~~-----dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~ 93 (665)
T KOG4640|consen 20 PINIKRIEWNPKM-----DLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEK 93 (665)
T ss_pred ccceEEEEEcCcc-----chhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccC
Confidence 3567889999998 799999999999999998 788999987887777 999999999999999999999999999
Q ss_pred CceeEE--EEcCCcceEEEEe
Q 019326 162 GRRSFY--HKIGKEASLIKFD 180 (343)
Q Consensus 162 ~~~~~~--~~~~~~~~~~~~~ 180 (343)
+..+.. ......+.++-|+
T Consensus 94 ~~~l~~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 94 GGRLVSFLFSVETDISKGIWD 114 (665)
T ss_pred CCceeccccccccchheeecc
Confidence 987665 4445667777775
No 352
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=98.22 E-value=0.0018 Score=56.03 Aligned_cols=183 Identities=10% Similarity=0.070 Sum_probs=99.9
Q ss_pred CCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEe-------ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 43 SPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAI-------HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 43 ~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~-------~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
+.|.++.|+ ...|+....||.+++||+. |+....+ .-. ...+....+..+| ++.-..++.+.+
T Consensus 81 ~~iv~~~wt~~e~LvvV~~dG~v~vy~~~-G~~~fsl~~~i~~~~v~-e~~i~~~~~~~~G-------ivvLt~~~~~~~ 151 (410)
T PF04841_consen 81 GRIVGMGWTDDEELVVVQSDGTVRVYDLF-GEFQFSLGEEIEEEKVL-ECRIFAIWFYKNG-------IVVLTGNNRFYV 151 (410)
T ss_pred CCEEEEEECCCCeEEEEEcCCEEEEEeCC-CceeechhhhccccCcc-cccccccccCCCC-------EEEECCCCeEEE
Confidence 789999998 7788889999999999987 3331111 111 2223333444455 333344455544
Q ss_pred EECCCcc-eeeee---ee-----ccc-cEEE-EEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCC
Q 019326 115 FDADPFV-LLTSV---KV-----HKK-GVND-LAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSG 183 (343)
Q Consensus 115 wd~~~~~-~~~~~---~~-----~~~-~v~~-i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
.+--... ..+.+ .. +.. .... ..++.+....+....++.+.+.+-...+. ....+++..+++||++
T Consensus 152 v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i~~~~~i~~iavSpng 228 (410)
T PF04841_consen 152 VNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---IDSDGPIIKIAVSPNG 228 (410)
T ss_pred EeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---ccCCCCeEEEEECCCC
Confidence 4322111 11111 10 000 1111 23444445555555556666444322211 2234678999999999
Q ss_pred CEEEEE-eCCcEEEEEcccceeEEEecCC--cceEEeeecCCCeEEEEeCCCcEEEEE
Q 019326 184 EKFFMV-TEEKVGIHQAEDAKLLCELDGK--KRILCAAPGENGVLFTGGEDRSITAWD 238 (343)
Q Consensus 184 ~~~~~~-~~~~i~~~d~~~~~~~~~~~~~--~~i~~~~~~~~~~l~~~~~dg~i~i~d 238 (343)
++++.. .+|.+.+....-.+....+... .....+.|..+..++..- ...+.+..
T Consensus 229 ~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~~-~~~l~lvg 285 (410)
T PF04841_consen 229 KFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLSW-EDELLLVG 285 (410)
T ss_pred CEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEEe-CCEEEEEC
Confidence 999988 7789988877666666666533 556677775443333322 33444444
No 353
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.20 E-value=0.00063 Score=58.90 Aligned_cols=164 Identities=13% Similarity=0.022 Sum_probs=91.4
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG 162 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~ 162 (343)
......+.++|++ +.++. +.||.-.++.....+... .+.-...+|.+.+ .+++-..++.|.++.--+.
T Consensus 32 ~~~p~~ls~npng-----r~v~V-~g~geY~iyt~~~~r~k~-----~G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~ 99 (443)
T PF04053_consen 32 EIYPQSLSHNPNG-----RFVLV-CGDGEYEIYTALAWRNKA-----FGSGLSFVWSSRN-RYAVLESSSTIKIYKNFKN 99 (443)
T ss_dssp SS--SEEEE-TTS-----SEEEE-EETTEEEEEETTTTEEEE-----EEE-SEEEE-TSS-EEEEE-TTS-EEEEETTEE
T ss_pred CcCCeeEEECCCC-----CEEEE-EcCCEEEEEEccCCcccc-----cCceeEEEEecCc-cEEEEECCCeEEEEEcCcc
Confidence 4567899999998 55555 778888888854433322 2334568898854 5666676888999743333
Q ss_pred ceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeecCC-CeEEEEeCCCcEEEEECCC
Q 019326 163 RRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGEN-GVLFTGGEDRSITAWDTNS 241 (343)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~i~d~~~ 241 (343)
+.......+..+..+-. |..+....++.|.+||+.+++.++.+.... |..+.|++. ++++..+. ..+.+++...
T Consensus 100 ~~~k~i~~~~~~~~If~---G~LL~~~~~~~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~-~~i~il~~~~ 174 (443)
T PF04053_consen 100 EVVKSIKLPFSVEKIFG---GNLLGVKSSDFICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTK-DSIYILKYNL 174 (443)
T ss_dssp -TT-----SS-EEEEE----SSSEEEEETTEEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S--SEEEEEE-H
T ss_pred ccceEEcCCcccceEEc---CcEEEEECCCCEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeC-CeEEEEEecc
Confidence 33233344433443333 888888888899999999999999998664 899999954 66666654 4688877553
Q ss_pred C-----------ceeEEecccccccEEEEEEEec
Q 019326 242 G-----------KVAYCIEDAHSARVKGIVVLTK 264 (343)
Q Consensus 242 ~-----------~~~~~~~~~h~~~v~~~~~~~~ 264 (343)
. ..+..+. .-...|.+.+|..+
T Consensus 175 ~~~~~~~~~g~e~~f~~~~-E~~~~IkSg~W~~d 207 (443)
T PF04053_consen 175 EAVAAIPEEGVEDAFELIH-EISERIKSGCWVED 207 (443)
T ss_dssp HHHHHBTTTB-GGGEEEEE-EE-S--SEEEEETT
T ss_pred hhcccccccCchhceEEEE-EecceeEEEEEEcC
Confidence 3 0233332 22567777777765
No 354
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.16 E-value=0.0021 Score=51.02 Aligned_cols=196 Identities=14% Similarity=0.146 Sum_probs=116.3
Q ss_pred eEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCe
Q 019326 35 LFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF 111 (343)
Q Consensus 35 ~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 111 (343)
...+.+-...+..|+|+ +.++++....+.|..++.+ |+.++.+.....+..-.|++..++ .++++--.++.
T Consensus 14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~-----~~vl~~Er~~~ 87 (248)
T PF06977_consen 14 AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNG-----RYVLSEERDQR 87 (248)
T ss_dssp EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STT-----EEEEEETTTTE
T ss_pred eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCC-----EEEEEEcCCCc
Confidence 34556666679999998 4577778888999888874 788887765434778899998877 56666556899
Q ss_pred EEEEECCCcc------eeeeee-----eccccEEEEEEecCCCEEEEEeCCCeEEEEEccC---CceeEEEE--------
Q 019326 112 VSIFDADPFV------LLTSVK-----VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR---GRRSFYHK-------- 169 (343)
Q Consensus 112 i~iwd~~~~~------~~~~~~-----~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~---~~~~~~~~-------- 169 (343)
+.++++.... ....+. .++..+-.++|+|.++.|+.+-...-..+|.+.. ........
T Consensus 88 L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~ 167 (248)
T PF06977_consen 88 LYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDK 167 (248)
T ss_dssp EEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT
T ss_pred EEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeecccccccccc
Confidence 9999883321 112222 2345689999999988888887776677777654 22211111
Q ss_pred -cCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEecCC----------cceEEeeecCCCeEEEEeCCCcEEE
Q 019326 170 -IGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELDGK----------KRILCAAPGENGVLFTGGEDRSITA 236 (343)
Q Consensus 170 -~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~----------~~i~~~~~~~~~~l~~~~~dg~i~i 236 (343)
.-..++.+.++|....+++- ....+..+| ..++.+..+.-. ...-.+++.+++.|+..++-+..++
T Consensus 168 ~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlfy~ 246 (248)
T PF06977_consen 168 LFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLFYR 246 (248)
T ss_dssp --SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEEEE
T ss_pred ceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceEEE
Confidence 12457889999976655554 667788888 677776666521 2467788876667777777776665
Q ss_pred E
Q 019326 237 W 237 (343)
Q Consensus 237 ~ 237 (343)
|
T Consensus 247 f 247 (248)
T PF06977_consen 247 F 247 (248)
T ss_dssp E
T ss_pred e
Confidence 5
No 355
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=98.15 E-value=0.0005 Score=46.24 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=72.5
Q ss_pred EEEEEEec---CC-CEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEe
Q 019326 133 VNDLAVHH---SG-KLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCEL 208 (343)
Q Consensus 133 v~~i~~~~---~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 208 (343)
|+++++.. +| +.|++|+.|..|++|+- ...+........+..++-...+++.+...+|+|-+|+- ...+...
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~--~~RlWRi 77 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEITETDKVTSLCSLGGGRFAYALANGTVGVYDR--SQRLWRI 77 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEecccceEEEEEcCCCEEEEEecCCEEEEEeC--cceeeee
Confidence 56666654 33 78999999999999974 46677777788888888877755444449999999975 3445555
Q ss_pred cCCcceEEeeecCC-----CeEEEEeCCCcEEE
Q 019326 209 DGKKRILCAAPGEN-----GVLFTGGEDRSITA 236 (343)
Q Consensus 209 ~~~~~i~~~~~~~~-----~~l~~~~~dg~i~i 236 (343)
+....++++.+.+- ..|++|-.+|.|-+
T Consensus 78 KSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 78 KSKNQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred ccCCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 55566777776532 27899999998753
No 356
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=98.10 E-value=0.0047 Score=57.36 Aligned_cols=197 Identities=13% Similarity=0.149 Sum_probs=125.2
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCC-------eEEEEEeCC--CC---------CCCCceEEEeeCCCeEE
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSS-------VTSLAFYTP--QN---------LSVPRNLFSTSADGFVS 113 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------v~~l~~~~~--~~---------~~~~~~l~s~~~dg~i~ 113 (343)
++.|+.++.++.|.-.|..+|+.+..+....... ...+.+... .. ......++.++.|+.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 7788888999999999999999999886541110 122333211 00 00124788899999999
Q ss_pred EEECCCcceeeeeeeccccEE-------------EEEEec--CCCEEEEEeC----------CCeEEEEEccCCceeEEE
Q 019326 114 IFDADPFVLLTSVKVHKKGVN-------------DLAVHH--SGKLALTVGR----------DDCLAMVNLVRGRRSFYH 168 (343)
Q Consensus 114 iwd~~~~~~~~~~~~~~~~v~-------------~i~~~~--~~~~l~~~~~----------d~~i~~wd~~~~~~~~~~ 168 (343)
-.|.++++.+..+.. .+.|. .+.-.| .+..+++++. +|.|+-+|.++|+.+...
T Consensus 274 ALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~ 352 (764)
T TIGR03074 274 ALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW 352 (764)
T ss_pred EEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence 999999998877642 22111 011112 1345666643 688999999999988766
Q ss_pred EcCCc------------------c-eEEEEeCCCCEEEEE-------------------eCCcEEEEEcccceeEEEecC
Q 019326 169 KIGKE------------------A-SLIKFDGSGEKFFMV-------------------TEEKVGIHQAEDAKLLCELDG 210 (343)
Q Consensus 169 ~~~~~------------------~-~~~~~~~~~~~~~~~-------------------~~~~i~~~d~~~~~~~~~~~~ 210 (343)
....+ + ..+++++....++.. ..+.+.-.|.++++....++.
T Consensus 353 ~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~ 432 (764)
T TIGR03074 353 DPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQT 432 (764)
T ss_pred ecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEecc
Confidence 53210 0 234555555544443 124466778889998887762
Q ss_pred --C--------c-c-eEEeeecCC---CeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 211 --K--------K-R-ILCAAPGEN---GVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 211 --~--------~-~-i~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
+ . + +..+...++ ..++.++.+|.++++|.++|+++...+
T Consensus 433 ~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~ 486 (764)
T TIGR03074 433 VHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVE 486 (764)
T ss_pred cCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeece
Confidence 1 1 1 122222133 288999999999999999999887654
No 357
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.10 E-value=1.1e-06 Score=75.68 Aligned_cols=181 Identities=15% Similarity=0.142 Sum_probs=118.0
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEee----CCCeEEEEEcCCC---
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGG----TDDTIHLYDLSTS--- 72 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~----~dg~i~iwd~~~~--- 72 (343)
+++|.++|.|.+-..+... .......++|..+.++++|+ .+.||.|- .|..+.|||+.++
T Consensus 73 lavG~atG~I~l~s~r~~h----------dSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltv 142 (783)
T KOG1008|consen 73 LAVGSATGNISLLSVRHPH----------DSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTV 142 (783)
T ss_pred hhhccccCceEEeecCCcc----------cccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCC
Confidence 6789999999998876521 11122335788899999998 46777763 3567999999876
Q ss_pred -eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEec-CCCEEEEEeC
Q 019326 73 -SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH-SGKLALTVGR 150 (343)
Q Consensus 73 -~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~ 150 (343)
+.-..|.........+++|..+. +++.+|.....+.++|++.. +...-.-.+..+..+...| .++++++-.
T Consensus 143 Pke~~~fs~~~l~gqns~cwlrd~-----klvlaGm~sr~~~ifdlRqs-~~~~~svnTk~vqG~tVdp~~~nY~cs~~- 215 (783)
T KOG1008|consen 143 PKESPLFSSSTLDGQNSVCWLRDT-----KLVLAGMTSRSVHIFDLRQS-LDSVSSVNTKYVQGITVDPFSPNYFCSNS- 215 (783)
T ss_pred CccccccccccccCccccccccCc-----chhhcccccchhhhhhhhhh-hhhhhhhhhhhcccceecCCCCCceeccc-
Confidence 22223333114556688888666 78889999999999999742 1111111234566677777 666777655
Q ss_pred CCeEEEEE-ccCCceeEE------EEcCCcceEEEEeCCCCEE--EEE-eCCcEEEEEcc
Q 019326 151 DDCLAMVN-LVRGRRSFY------HKIGKEASLIKFDGSGEKF--FMV-TEEKVGIHQAE 200 (343)
Q Consensus 151 d~~i~~wd-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~--~~~-~~~~i~~~d~~ 200 (343)
||.|.+|| .+.-+.... -+.+.....++|.|...-+ +.. ..+.|++|++.
T Consensus 216 dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 216 DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 99999999 433322111 1123457889999865433 333 67889999875
No 358
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.02 E-value=1.9e-05 Score=70.47 Aligned_cols=137 Identities=15% Similarity=0.167 Sum_probs=102.2
Q ss_pred CcceEEEEeCCCCEEEEE-----eCCcEEEEEcccceeEEEecCCcceEEeeecCCC-eEEEEeCCCcEEEEECCCCcee
Q 019326 172 KEASLIKFDGSGEKFFMV-----TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENG-VLFTGGEDRSITAWDTNSGKVA 245 (343)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~ 245 (343)
...+...|+|...+++++ ..|.+.||- .+|++.+....+..+++++|++.. .|+.|-.-|.+.+|...+.+.-
T Consensus 16 avsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~h 94 (1416)
T KOG3617|consen 16 AVSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETH 94 (1416)
T ss_pred ccccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccccceehhhhccChHHHHHhhccccceeEEEecCCceee
Confidence 344567899999998887 367787773 567777777777778899999876 6677778899999998876654
Q ss_pred EEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccc--eeEEEcCCC
Q 019326 246 YCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSR--LTCLAGSST 319 (343)
Q Consensus 246 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~--i~~~~~s~~ 319 (343)
.... .|..+|..+.|++++. .++|+..=|.+.+|.+.-....+..++.....+.. ..|...+++
T Consensus 95 tv~~-th~a~i~~l~wS~~G~---------~l~t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~ 160 (1416)
T KOG3617|consen 95 TVVE-THPAPIQGLDWSHDGT---------VLMTLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYD 160 (1416)
T ss_pred eecc-CCCCCceeEEecCCCC---------eEEEcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCC
Confidence 4444 8999999999999998 99999999999999887543334444444444443 455566666
No 359
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.01 E-value=0.0073 Score=51.87 Aligned_cols=210 Identities=16% Similarity=0.211 Sum_probs=144.4
Q ss_pred EEEec--Cc-eEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC---CCeEEEEECCCc
Q 019326 47 TVAVS--GT-AAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA---DGFVSIFDADPF 120 (343)
Q Consensus 47 ~l~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~ 120 (343)
.++.+ +. ..++...++.|.+.|..+.+........ .....+++.+++ +.+..+.. ++++.+.|..+.
T Consensus 78 ~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG--~~P~~~~~~~~~-----~~vYV~n~~~~~~~vsvid~~t~ 150 (381)
T COG3391 78 GVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVG--LGPVGLAVDPDG-----KYVYVANAGNGNNTVSVIDAATN 150 (381)
T ss_pred ceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeec--cCCceEEECCCC-----CEEEEEecccCCceEEEEeCCCC
Confidence 44554 44 4555555688999998888777776655 366789999998 55555554 689999999998
Q ss_pred ceeeeeeeccccEEEEEEecCCCEEEEEe-CCCeEEEEEccCCceeE-----EEEcCCcceEEEEeCCCCEEEEE-e-C-
Q 019326 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVG-RDDCLAMVNLVRGRRSF-----YHKIGKEASLIKFDGSGEKFFMV-T-E- 191 (343)
Q Consensus 121 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~-~- 191 (343)
+.......-..+ ..+++.|++..++... .++.|.+.|........ ..........+.++|++..+.+. . +
T Consensus 151 ~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~ 229 (381)
T COG3391 151 KVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSG 229 (381)
T ss_pred eEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCC
Confidence 888875543344 8899999998666555 78999999977665543 13334556779999999988877 3 2
Q ss_pred -CcEEEEEcccceeEEE-ecCCc-ceEEeeec-CCCeEEEE-eCCCcEEEEECCCCceeEEeccccc---ccEEEEEEEe
Q 019326 192 -EKVGIHQAEDAKLLCE-LDGKK-RILCAAPG-ENGVLFTG-GEDRSITAWDTNSGKVAYCIEDAHS---ARVKGIVVLT 263 (343)
Q Consensus 192 -~~i~~~d~~~~~~~~~-~~~~~-~i~~~~~~-~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~h~---~~v~~~~~~~ 263 (343)
+.+...|..++..... ..... ....+... .+..+.+. ...+.+.+.|..+........ ... ..+..+++.+
T Consensus 230 ~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~-~~~~~~~~~~~~~~~~ 308 (381)
T COG3391 230 SNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGP-TGNEALGEPVSIAISP 308 (381)
T ss_pred CceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeec-ccccccccceecccee
Confidence 4888899888877765 22222 34444555 45555555 345889999999888777665 222 2355565555
Q ss_pred cC
Q 019326 264 KN 265 (343)
Q Consensus 264 ~~ 265 (343)
..
T Consensus 309 ~~ 310 (381)
T COG3391 309 LY 310 (381)
T ss_pred ec
Confidence 43
No 360
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=98.01 E-value=0.0079 Score=52.08 Aligned_cols=191 Identities=13% Similarity=0.134 Sum_probs=109.6
Q ss_pred eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc------eeeeeeeccccEEEE
Q 019326 63 TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV------LLTSVKVHKKGVNDL 136 (343)
Q Consensus 63 ~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~v~~i 136 (343)
.|++|+.. |+.+..+.-. .+.|.++.|..+. .|+....||.+++||+.... .+.........+...
T Consensus 62 ~I~iys~s-G~ll~~i~w~-~~~iv~~~wt~~e------~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~ 133 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWD-SGRIVGMGWTDDE------ELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAI 133 (410)
T ss_pred EEEEECCC-CCEeEEEEEC-CCCEEEEEECCCC------eEEEEEcCCEEEEEeCCCceeechhhhccccCccccccccc
Confidence 59999976 7777777766 5899999999865 78888999999999986432 111111111222233
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCc-eeEE-EEcCCcce----------EEEEeCCCCEEEEE-eCCcEEEEEcccce
Q 019326 137 AVHHSGKLALTVGRDDCLAMVNLVRGR-RSFY-HKIGKEAS----------LIKFDGSGEKFFMV-TEEKVGIHQAEDAK 203 (343)
Q Consensus 137 ~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~-~~~~~~~~----------~~~~~~~~~~~~~~-~~~~i~~~d~~~~~ 203 (343)
.+..+|-.++ ..++.+.+..-.... .... ...+.... ...++.+....+.. .++.+.+.+....+
T Consensus 134 ~~~~~GivvL--t~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~ 211 (410)
T PF04841_consen 134 WFYKNGIVVL--TGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFK 211 (410)
T ss_pred ccCCCCEEEE--CCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEccccc
Confidence 3333553333 334455444322211 1111 01111000 12233444444433 44455544433221
Q ss_pred eEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCC
Q 019326 204 LLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 204 ~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
.+...+++..++.+ ++++++.-..+|.+.+.+..-.+.+.++...-......|.|..+..
T Consensus 212 ---~i~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da 272 (410)
T PF04841_consen 212 ---QIDSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA 272 (410)
T ss_pred ---cccCCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence 13345789999999 5678888888999999987766777777633345667888887653
No 361
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.99 E-value=0.00041 Score=63.58 Aligned_cols=142 Identities=13% Similarity=0.114 Sum_probs=99.7
Q ss_pred EeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc--ceeee-ee--eccc
Q 019326 57 SGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF--VLLTS-VK--VHKK 131 (343)
Q Consensus 57 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~-~~--~~~~ 131 (343)
.......|+-.|+++|+.+..+..+...+|..++-........+..-+.|-.++.+..||.+-. +++.. .. ....
T Consensus 499 ~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~ 578 (794)
T PF08553_consen 499 DPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKN 578 (794)
T ss_pred cCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCC
Confidence 3345678999999999999999988444455554332211112345677888889999998643 22211 11 1234
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCcee--EEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcc
Q 019326 132 GVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRS--FYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAE 200 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 200 (343)
...|++-+.+| +||+|+.+|.|++||- .++.. ....++.+|..+..+.+|+++++..+..+.+++..
T Consensus 579 ~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t~ 647 (794)
T PF08553_consen 579 NFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDTL 647 (794)
T ss_pred CceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEEe
Confidence 56777777666 7999999999999994 44322 23355789999999999999999999999998863
No 362
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=97.94 E-value=1.6e-05 Score=60.14 Aligned_cols=143 Identities=16% Similarity=0.190 Sum_probs=89.2
Q ss_pred EEEEEeCCCeEEEEEccCCceeEEEEcCCcceE-EEEeCCCCEEEEE-eCCcEEEEEcccce-eEEEec-CCcceEEeee
Q 019326 144 LALTVGRDDCLAMVNLVRGRRSFYHKIGKEASL-IKFDGSGEKFFMV-TEEKVGIHQAEDAK-LLCELD-GKKRILCAAP 219 (343)
Q Consensus 144 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~i~~~d~~~~~-~~~~~~-~~~~i~~~~~ 219 (343)
.+...+.+|.|.-++++..+....... .+.+ .....-+.-++++ .++.+.+|...... ....+. ....+.++..
T Consensus 32 ~l~~~sa~~~v~~~~~~k~k~s~rse~--~~~e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip 109 (238)
T KOG2444|consen 32 LLRATSADGLVRERKVRKHKESCRSER--FIDEGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIP 109 (238)
T ss_pred hhccccCCcccccchhhhhhhhhhhhh--hhhcceeecccCceEEeecccceEEEecCCccchHHHhhhcccccceeccc
Confidence 344556778888777765432211111 0111 1222234455555 89999999876211 111111 3344555544
Q ss_pred c--CCCeEEEEeCCCcEEEEECCCCceeEEeccccc-ccEEEEEEEecCCCCCCCCCCeEEEEE--cCCCcEEEEeccCc
Q 019326 220 G--ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHS-ARVKGIVVLTKNDGGSTAENPYLVASA--SSDGVICVWDVRMA 294 (343)
Q Consensus 220 ~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~~~l~s~--~~dg~i~vwd~~~~ 294 (343)
. .+.+..++..+|.|+.|++...+.+.... .|. .++..+.....+. +++.+ |.|..++.|++...
T Consensus 110 ~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g-~h~~~~~e~~ivv~sd~---------~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 110 NGRDSSLGCVGAQDGRIRACNIKPNKVLGYVG-QHNFESGEELIVVGSDE---------FLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred cccccceeEEeccCCceeeeccccCceeeeec-cccCCCcceeEEecCCc---------eEEeeccccchhhhhcchhhh
Confidence 4 34588899999999999999888777666 677 6777776666665 78888 88999999999875
Q ss_pred cccC
Q 019326 295 IKEK 298 (343)
Q Consensus 295 ~~~~ 298 (343)
....
T Consensus 180 ~d~~ 183 (238)
T KOG2444|consen 180 KDES 183 (238)
T ss_pred hccC
Confidence 4333
No 363
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=97.89 E-value=0.0076 Score=54.46 Aligned_cols=226 Identities=15% Similarity=0.151 Sum_probs=122.7
Q ss_pred CceEEEeeCCC------eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC------CeEEEEECCC
Q 019326 52 GTAAASGGTDD------TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD------GFVSIFDADP 119 (343)
Q Consensus 52 ~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~ 119 (343)
+..++.||.++ .+..||..+++......-.....-.+++...+ ...++|+.| .++..||..+
T Consensus 285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~------~lYv~GG~~~~~~~l~~ve~YD~~~ 358 (571)
T KOG4441|consen 285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNG------KLYVVGGYDSGSDRLSSVERYDPRT 358 (571)
T ss_pred CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECC------EEEEEccccCCCcccceEEEecCCC
Confidence 56677777773 58889988774333222111233445555544 488899998 3577888765
Q ss_pred cc--eeeeeeeccccEEEEEEecCCCEEEEEeCCCe-----EEEEEccCCceeEEEEcCCcceEEEEeC-CCCEEEEE-e
Q 019326 120 FV--LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDC-----LAMVNLVRGRRSFYHKIGKEASLIKFDG-SGEKFFMV-T 190 (343)
Q Consensus 120 ~~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~-----i~~wd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~ 190 (343)
.+ .+..+.......... .-+|...++||.||. +-.||..+.+-................. ++...+++ .
T Consensus 359 ~~W~~~a~M~~~R~~~~v~--~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~ 436 (571)
T KOG4441|consen 359 NQWTPVAPMNTKRSDFGVA--VLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGG 436 (571)
T ss_pred CceeccCCccCccccceeE--EECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCc
Confidence 44 222222222211111 125778888988864 7778887766443333333333322222 45555555 2
Q ss_pred C------CcEEEEEcccceeEEEec--CCcceEEeeecCCCeEEEEeCCCc-----EEEEECCCCceeEEecccccccEE
Q 019326 191 E------EKVGIHQAEDAKLLCELD--GKKRILCAAPGENGVLFTGGEDRS-----ITAWDTNSGKVAYCIEDAHSARVK 257 (343)
Q Consensus 191 ~------~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~~~h~~~v~ 257 (343)
+ ..+..||..+.+-...-+ ....-..++..++.+.+.|+.|+. |..||..+.+-...-...+...-.
T Consensus 437 ~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~ 516 (571)
T KOG4441|consen 437 DGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAV 516 (571)
T ss_pred CCCccccceEEEEcCCCCceeecCCcccccccceEEEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccc
Confidence 2 346778887765433322 222222344447778888887763 777888766533221101222222
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEcCCC-----cEEEEeccCcc
Q 019326 258 GIVVLTKNDGGSTAENPYLVASASSDG-----VICVWDVRMAI 295 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~ 295 (343)
+++.... ...+.|+.|| +|..||..+.+
T Consensus 517 g~~~~~~----------~ly~vGG~~~~~~l~~ve~ydp~~d~ 549 (571)
T KOG4441|consen 517 GVVVLGG----------KLYAVGGFDGNNNLNTVECYDPETDT 549 (571)
T ss_pred cEEEECC----------EEEEEecccCccccceeEEcCCCCCc
Confidence 2222222 2788888886 57778777654
No 364
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.89 E-value=0.00027 Score=60.09 Aligned_cols=138 Identities=15% Similarity=0.197 Sum_probs=101.9
Q ss_pred EEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCC--------EEEEEeCCcEEEEEccccee--E-----EEe
Q 019326 144 LALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGE--------KFFMVTEEKVGIHQAEDAKL--L-----CEL 208 (343)
Q Consensus 144 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~~~d~~~~~~--~-----~~~ 208 (343)
+|.++.....++-.|++.|+.+........|+.+.+.|+.+ .|+...++.|.-||.+-... + +.+
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy 427 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQY 427 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecccc
Confidence 34455556779999999999999999998898888888643 33333899999999884322 1 122
Q ss_pred cCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEE
Q 019326 209 DGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICV 288 (343)
Q Consensus 209 ~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~v 288 (343)
.......|.+-..++++++|+.+|.|++||- .+...++.-.+.+.+|..+..+.++. +|+..+ +..+.+
T Consensus 428 ~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGK---------wil~Tc-~tyLlL 496 (644)
T KOG2395|consen 428 STKNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGK---------WILATC-KTYLLL 496 (644)
T ss_pred ccccccceeeecCCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCc---------EEEEec-ccEEEE
Confidence 2445677777777889999999999999998 55555444338899999999999987 555544 567777
Q ss_pred Eecc
Q 019326 289 WDVR 292 (343)
Q Consensus 289 wd~~ 292 (343)
-++.
T Consensus 497 i~t~ 500 (644)
T KOG2395|consen 497 IDTL 500 (644)
T ss_pred EEEe
Confidence 7664
No 365
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.87 E-value=0.0046 Score=55.84 Aligned_cols=203 Identities=16% Similarity=0.135 Sum_probs=111.3
Q ss_pred CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee------CCC--eEEEEECCCcceeeeeeecccc
Q 019326 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS------ADG--FVSIFDADPFVLLTSVKVHKKG 132 (343)
Q Consensus 61 dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~------~dg--~i~iwd~~~~~~~~~~~~~~~~ 132 (343)
+|.+.-.+-.....+....+. ...+...+++|++ +.++... .|. .|.+++... .. ..+. ....
T Consensus 328 ~G~l~~~~~~~~~pv~g~~g~-~~~vsspaiSpdG-----~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~~-~~lt-~g~~ 398 (591)
T PRK13616 328 DGSLVSVDGQGVTPVPGAFGQ-MGNITSAALSRSG-----RQVAAVVTLGRGAPDPASSLWVGPLGG-VA-VQVL-EGHS 398 (591)
T ss_pred CCeEEEecCCCeeeCCCcccc-ccCcccceECCCC-----CEEEEEEeecCCCCCcceEEEEEeCCC-cc-eeee-cCCC
Confidence 555544432222223222233 3467889999999 5555444 243 455555422 22 2222 1223
Q ss_pred EEEEEEecCCCEEEEEeCC------------CeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEE---E
Q 019326 133 VNDLAVHHSGKLALTVGRD------------DCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGI---H 197 (343)
Q Consensus 133 v~~i~~~~~~~~l~~~~~d------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~ 197 (343)
...-.|+|+|..+++.... +.+.+.++..+.... ..+..+..+.|+|+|.+++...++.+.+ -
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~~g~v~Va~Vv 476 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMIIGGKVYLAVVE 476 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEECCEEEEEEEE
Confidence 7778999998877776532 233333444333222 4456799999999999999987788777 4
Q ss_pred Eccccee-E---EEec--CCcceEEeeecCCCeEEEEeCCCcEEEEECCC-CceeEEeccc--ccccEEEEEEEecCCCC
Q 019326 198 QAEDAKL-L---CELD--GKKRILCAAPGENGVLFTGGEDRSITAWDTNS-GKVAYCIEDA--HSARVKGIVVLTKNDGG 268 (343)
Q Consensus 198 d~~~~~~-~---~~~~--~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~--h~~~v~~~~~~~~~~~~ 268 (343)
....+.. + ..+. ....+..+.|.++..|+++..++.-.+|.+.- |.....+. + ...++.+++-.+.
T Consensus 477 r~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~V~~~~~~~~v~~v~vDG~~~~~~~-~~n~~~~v~~vaa~~~---- 551 (591)
T PRK13616 477 QTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLVVGRSDPEHPVWYVNLDGSNSDALP-SRNLSAPVVAVAASPS---- 551 (591)
T ss_pred eCCCCceeecccEEeecccCCccccceEecCCEEEEEecCCCCceEEEecCCccccccC-CCCccCceEEEecCCc----
Confidence 4344431 1 1121 22335778898666566666655544554332 22222223 2 2566777766653
Q ss_pred CCCCCCeEEEEEcCCCcE
Q 019326 269 STAENPYLVASASSDGVI 286 (343)
Q Consensus 269 ~~~~~~~~l~s~~~dg~i 286 (343)
.++....+|.+
T Consensus 552 -------~iyv~~~~g~~ 562 (591)
T PRK13616 552 -------TVYVTDARAVL 562 (591)
T ss_pred -------eEEEEcCCceE
Confidence 35555666633
No 366
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.84 E-value=6.7e-05 Score=40.06 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=33.9
Q ss_pred ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 121 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
++...+..|...|.++.|.+++..+++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 45667778889999999999999999999999999996
No 367
>PHA02713 hypothetical protein; Provisional
Probab=97.84 E-value=0.0034 Score=56.72 Aligned_cols=184 Identities=7% Similarity=0.048 Sum_probs=95.9
Q ss_pred ecCceEEEeeCC------CeEEEEEcCCCeee--eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC-----eEEEEE
Q 019326 50 VSGTAAASGGTD------DTIHLYDLSTSSSL--GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG-----FVSIFD 116 (343)
Q Consensus 50 ~~~~~l~s~~~d------g~i~iwd~~~~~~~--~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg-----~i~iwd 116 (343)
..+...+.||.+ ..+..||..++.-. ..+... .... +++.. ++ +..+.|+.++ ++..||
T Consensus 302 l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~-R~~~-~~~~~-~g-----~IYviGG~~~~~~~~sve~Yd 373 (557)
T PHA02713 302 VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKN-RCRF-SLAVI-DD-----TIYAIGGQNGTNVERTIECYT 373 (557)
T ss_pred ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcch-hhce-eEEEE-CC-----EEEEECCcCCCCCCceEEEEE
Confidence 346677777753 34778888776432 122111 1122 22322 34 5777787754 478899
Q ss_pred CCCc--ceeeeeeeccccEEEEEEecCCCEEEEEeCC-----------------------CeEEEEEccCCceeEEEEcC
Q 019326 117 ADPF--VLLTSVKVHKKGVNDLAVHHSGKLALTVGRD-----------------------DCLAMVNLVRGRRSFYHKIG 171 (343)
Q Consensus 117 ~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d-----------------------~~i~~wd~~~~~~~~~~~~~ 171 (343)
..+. ..+..+.........+. -+++..+.||.+ ..+..||.++.+-.......
T Consensus 374 p~~~~W~~~~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~ 451 (557)
T PHA02713 374 MGDDKWKMLPDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFW 451 (557)
T ss_pred CCCCeEEECCCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCC
Confidence 8653 22222221111111222 256777777754 24777888877644333332
Q ss_pred Cc-ceEEEEeCCCCEEEEE-eC------CcEEEEEccc-ceeE--EEecCCcceEEeeecCCCeEEEEeCCC--cEEEEE
Q 019326 172 KE-ASLIKFDGSGEKFFMV-TE------EKVGIHQAED-AKLL--CELDGKKRILCAAPGENGVLFTGGEDR--SITAWD 238 (343)
Q Consensus 172 ~~-~~~~~~~~~~~~~~~~-~~------~~i~~~d~~~-~~~~--~~~~~~~~i~~~~~~~~~~l~~~~~dg--~i~i~d 238 (343)
.. .......-+++..+++ .+ ..+..||..+ .+-. ..++.+.....++..++.+.++|+.+| .+..||
T Consensus 452 ~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd 531 (557)
T PHA02713 452 TGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILHDNTIMMLHCYESYMLQDTFN 531 (557)
T ss_pred cccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEECCEEEEEeeecceeehhhcC
Confidence 11 1111222345555555 22 2356788887 3322 233322223334444788888998888 677888
Q ss_pred CCCCc
Q 019326 239 TNSGK 243 (343)
Q Consensus 239 ~~~~~ 243 (343)
..+.+
T Consensus 532 ~~~~~ 536 (557)
T PHA02713 532 VYTYE 536 (557)
T ss_pred ccccc
Confidence 87665
No 368
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.83 E-value=0.012 Score=50.14 Aligned_cols=246 Identities=11% Similarity=0.081 Sum_probs=127.4
Q ss_pred CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee-eec----------
Q 019326 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV-KVH---------- 129 (343)
Q Consensus 61 dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~---------- 129 (343)
.+.+.+||+.+++....... ...+....|+|++ +.++... ++.|.+++..+++..+.- .+.
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~--~~~~~~~~~sP~g-----~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dw 93 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP--PPKLQDAKWSPDG-----KYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDW 93 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E--ETTBSEEEE-SSS-----TEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--H
T ss_pred ceeEEEEecCCCceEECcCC--ccccccceeecCC-----CeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccce
Confidence 35689999998765544433 4778899999999 5666654 578999998766433221 110
Q ss_pred ------cccEEEEEEecCCCEEEEEeCC-CeE-----------------------------------EEEEccCCceeEE
Q 019326 130 ------KKGVNDLAVHHSGKLALTVGRD-DCL-----------------------------------AMVNLVRGRRSFY 167 (343)
Q Consensus 130 ------~~~v~~i~~~~~~~~l~~~~~d-~~i-----------------------------------~~wd~~~~~~~~~ 167 (343)
-+.-..+-|+|++++|+....| ..+ .++|+.+++....
T Consensus 94 vyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~ 173 (353)
T PF00930_consen 94 VYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTEL 173 (353)
T ss_dssp HHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE
T ss_pred eccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEe
Confidence 0122457899999888776543 112 2333433332111
Q ss_pred E-E-----cCCcceEEEEeCCCCEEEEE-e---CC--cEEEEEcccceeEEEec--CCcce---EEeee--c-CCCeEEE
Q 019326 168 H-K-----IGKEASLIKFDGSGEKFFMV-T---EE--KVGIHQAEDAKLLCELD--GKKRI---LCAAP--G-ENGVLFT 227 (343)
Q Consensus 168 ~-~-----~~~~~~~~~~~~~~~~~~~~-~---~~--~i~~~d~~~~~~~~~~~--~~~~i---~~~~~--~-~~~~l~~ 227 (343)
. . ...-+..+.|.+++..++.. . .+ .+.++|..+++....+. ....+ ....+ . .+.++..
T Consensus 174 ~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~ 253 (353)
T PF00930_consen 174 DPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWI 253 (353)
T ss_dssp ---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEE
T ss_pred eeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEE
Confidence 1 0 11224568888888844444 2 22 25556776654433222 22111 12222 2 3346666
Q ss_pred EeCCCc--EEEEECCCCceeEEecccccccEEE-EEEEecCCCCCCCCCCeEEEEEcCC--CcEEEEeccCccccCCCcc
Q 019326 228 GGEDRS--ITAWDTNSGKVAYCIEDAHSARVKG-IVVLTKNDGGSTAENPYLVASASSD--GVICVWDVRMAIKEKPLPL 302 (343)
Q Consensus 228 ~~~dg~--i~i~d~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~~~~~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~ 302 (343)
...+|. |.+++...+. ...+. ...-.|.. +.+.+.+. .+.+++..+ +.-.+|.+.-.....+..+
T Consensus 254 s~~~G~~hly~~~~~~~~-~~~lT-~G~~~V~~i~~~d~~~~--------~iyf~a~~~~p~~r~lY~v~~~~~~~~~~L 323 (353)
T PF00930_consen 254 SERDGYRHLYLYDLDGGK-PRQLT-SGDWEVTSILGWDEDNN--------RIYFTANGDNPGERHLYRVSLDSGGEPKCL 323 (353)
T ss_dssp EETTSSEEEEEEETTSSE-EEESS--SSS-EEEEEEEECTSS--------EEEEEESSGGTTSBEEEEEETTETTEEEES
T ss_pred EEcCCCcEEEEEcccccc-eeccc-cCceeecccceEcCCCC--------EEEEEecCCCCCceEEEEEEeCCCCCeEec
Confidence 667776 4455655444 44555 44556655 45555544 245566553 3455554443201111122
Q ss_pred cccccccce-eEEEcCCCCceecccc
Q 019326 303 AEAKTNSRL-TCLAGSSTKSFKRPQI 327 (343)
Q Consensus 303 ~~~~~~~~i-~~~~~s~~~~~~~~~~ 327 (343)
. ..... ..+.+||++++.+...
T Consensus 324 T---~~~~~~~~~~~Spdg~y~v~~~ 346 (353)
T PF00930_consen 324 T---CEDGDHYSASFSPDGKYYVDTY 346 (353)
T ss_dssp S---TTSSTTEEEEE-TTSSEEEEEE
T ss_pred c---CCCCCceEEEECCCCCEEEEEE
Confidence 1 11112 5899999999887543
No 369
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.82 E-value=0.0018 Score=55.96 Aligned_cols=141 Identities=15% Similarity=0.114 Sum_probs=89.5
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCe--EEEEECCCcceeeeeeeccccEEEEEEe
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF--VSIFDADPFVLLTSVKVHKKGVNDLAVH 139 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~v~~i~~~ 139 (343)
..+.++++++++....... ...-..-+|+|++. +++++...||. |+++|+.+.+ ...+....+.-..=.|+
T Consensus 218 ~~i~~~~l~~g~~~~i~~~--~g~~~~P~fspDG~----~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~s 290 (425)
T COG0823 218 PRIYYLDLNTGKRPVILNF--NGNNGAPAFSPDGS----KLAFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSWS 290 (425)
T ss_pred ceEEEEeccCCccceeecc--CCccCCccCCCCCC----EEEEEECCCCCccEEEEcCCCCc-ceecccCCccccCccCC
Confidence 4688999998876555542 24445678999993 56667777775 5666776655 33344333333356799
Q ss_pred cCCCEEEEEeC-CCe--EEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEe--CCc--EEEEEcccceeEEEec
Q 019326 140 HSGKLALTVGR-DDC--LAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT--EEK--VGIHQAEDAKLLCELD 209 (343)
Q Consensus 140 ~~~~~l~~~~~-d~~--i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--i~~~d~~~~~~~~~~~ 209 (343)
|+|+.++-.+. .|. |.+++.+.+...........-..-.++|+|++++... ++. |.++|+.++...+.+.
T Consensus 291 pdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt 367 (425)
T COG0823 291 PDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT 367 (425)
T ss_pred CCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc
Confidence 99988776654 343 6666776665533333333334788999999999883 455 5666666555444444
No 370
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.014 Score=48.10 Aligned_cols=159 Identities=16% Similarity=0.098 Sum_probs=101.2
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEec----cCCCCCeEEEEEeCCCCCCCCceEEEeeCC------------CeEEEE
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIH----HHESSSVTSLAFYTPQNLSVPRNLFSTSAD------------GFVSIF 115 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d------------g~i~iw 115 (343)
+..|+++. .| +.+++.+++..+..+. .......+.+...|++ .++.++.. |.|+.+
T Consensus 77 ~g~Lv~~~-~g-~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG------~~wfgt~~~~~~~~~~~~~~G~lyr~ 148 (307)
T COG3386 77 GGRLIACE-HG-VRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDG------RIWFGDMGYFDLGKSEERPTGSLYRV 148 (307)
T ss_pred CCeEEEEc-cc-cEEEeccCCceeEEeccccCCCCcCCCCceeEcCCC------CEEEeCCCccccCccccCCcceEEEE
Confidence 44555544 33 6677776665533332 2213556778888888 34444443 334444
Q ss_pred ECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC-CCeEEEEEccC--Cc---ee--EEE-EcCCcceEEEEeCCCCEE
Q 019326 116 DADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-DDCLAMVNLVR--GR---RS--FYH-KIGKEASLIKFDGSGEKF 186 (343)
Q Consensus 116 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-d~~i~~wd~~~--~~---~~--~~~-~~~~~~~~~~~~~~~~~~ 186 (343)
|. .+..++.+..+-..-+.|+|+|+++.|+.+.. .+.|.-|++.. +. .. ... ..+...-.++...+|.+.
T Consensus 149 ~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw 227 (307)
T COG3386 149 DP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLW 227 (307)
T ss_pred cC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEE
Confidence 43 45555555555666788999999977776655 47788887752 11 11 111 123556668889999998
Q ss_pred EEE-eC-CcEEEEEcccceeEEEecCC-cceEEeeec
Q 019326 187 FMV-TE-EKVGIHQAEDAKLLCELDGK-KRILCAAPG 220 (343)
Q Consensus 187 ~~~-~~-~~i~~~d~~~~~~~~~~~~~-~~i~~~~~~ 220 (343)
+++ .+ +.|..|+.. ++.+..+..+ ..+++++|-
T Consensus 228 ~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~Fg 263 (307)
T COG3386 228 VAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFG 263 (307)
T ss_pred EecccCCceEEEECCC-CcEEEEEECCCCCCccceEe
Confidence 766 44 389999988 8988888855 788888886
No 371
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.78 E-value=0.00031 Score=64.73 Aligned_cols=96 Identities=19% Similarity=0.339 Sum_probs=69.6
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
+++|++.|.+...|.... ..+...-..-.++|++++|+ |..++.|-.+|.|.+||..+++.++.+..
T Consensus 102 ivi~Ts~ghvl~~d~~~n-----------L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e 170 (1206)
T KOG2079|consen 102 IVIGTSHGHVLLSDMTGN-----------LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITE 170 (1206)
T ss_pred EEEEcCchhhhhhhhhcc-----------cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeee
Confidence 677888888888887651 23233323346899999999 88999999999999999999998888876
Q ss_pred CCCCCeEEE---EEeCCCCCCCCceEEEeeCCCeEEEEEC
Q 019326 81 HESSSVTSL---AFYTPQNLSVPRNLFSTSADGFVSIFDA 117 (343)
Q Consensus 81 ~~~~~v~~l---~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 117 (343)
+ ..+.+.+ .+...+ ..++++...|. +|.+
T Consensus 171 ~-~ap~t~vi~v~~t~~n-----S~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 171 H-GAPVTGVIFVGRTSQN-----SKLLTSDTGGS--FWKL 202 (1206)
T ss_pred c-CCccceEEEEEEeCCC-----cEEEEccCCCc--eEEE
Confidence 5 4444443 334444 47888888886 5554
No 372
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.76 E-value=0.0045 Score=53.56 Aligned_cols=173 Identities=10% Similarity=0.012 Sum_probs=99.1
Q ss_pred EEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEe-e--CC-CeEEEEECCCcceeeeeeeccccEEEEEEe
Q 019326 64 IHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFST-S--AD-GFVSIFDADPFVLLTSVKVHKKGVNDLAVH 139 (343)
Q Consensus 64 i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~-~--~d-g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~ 139 (343)
+.+=|.+ +.....+... ...+..-+|+|++ ..++-. - .. ..+.++++.+++...... ..+.-..-+|+
T Consensus 175 l~~~D~d-g~~~~~l~~~-~~~~~~p~ws~~~-----~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fs 246 (425)
T COG0823 175 LALGDYD-GYNQQKLTDS-GSLILTPAWSPDG-----KKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFS 246 (425)
T ss_pred EEEEccC-CcceeEeccc-CcceeccccCcCC-----CceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCC
Confidence 4444443 4444444444 5677777899988 343322 1 22 359999998876554444 33334557899
Q ss_pred cCCCEEEEE-eCCCe--EEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEe--CC--cEEEEEcccceeEEEecCCc
Q 019326 140 HSGKLALTV-GRDDC--LAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT--EE--KVGIHQAEDAKLLCELDGKK 212 (343)
Q Consensus 140 ~~~~~l~~~-~~d~~--i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~i~~~d~~~~~~~~~~~~~~ 212 (343)
|+|+.|+.+ ..||. |++.|+..+...........-..-.|+|+|+.++..+ .| .|.+++.+.....+......
T Consensus 247 pDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~ 326 (425)
T COG0823 247 PDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGG 326 (425)
T ss_pred CCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCC
Confidence 999766654 44555 6666777766444233333344678999999998883 33 36666776665533222222
Q ss_pred ceEEeeec-CCCeEEEEeC-CCc--EEEEECCCCce
Q 019326 213 RILCAAPG-ENGVLFTGGE-DRS--ITAWDTNSGKV 244 (343)
Q Consensus 213 ~i~~~~~~-~~~~l~~~~~-dg~--i~i~d~~~~~~ 244 (343)
.-..-.++ ++++++..+. +|. |.+.|+.++..
T Consensus 327 ~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~ 362 (425)
T COG0823 327 GNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGK 362 (425)
T ss_pred CCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCc
Confidence 11144444 4555555443 344 66666665553
No 373
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.76 E-value=8.9e-05 Score=39.55 Aligned_cols=39 Identities=31% Similarity=0.588 Sum_probs=33.2
Q ss_pred CceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 242 GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 242 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
+++...+. .|...|.++.+.+... ++++++.|+.+++|+
T Consensus 2 ~~~~~~~~-~~~~~i~~~~~~~~~~---------~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLK-GHTGPVTSVAFSPDGK---------YLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEE-ecCCceeEEEECCCCC---------EEEEecCCCeEEEcC
Confidence 34566666 8889999999998876 999999999999996
No 374
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.72 E-value=0.015 Score=46.32 Aligned_cols=164 Identities=14% Similarity=0.194 Sum_probs=112.2
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeec-cccEEEEEEecCCCEEEEEeCCCeEEEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVH-KKGVNDLAVHHSGKLALTVGRDDCLAMV 157 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~~~~~d~~i~~w 157 (343)
.+. ...++++.|+|+. +.|++......-.++=...|+.+.++... -.....|.+..++++.++--.++.+.++
T Consensus 82 ~g~-~~nvS~LTynp~~-----rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~ 155 (316)
T COG3204 82 LGE-TANVSSLTYNPDT-----RTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLF 155 (316)
T ss_pred ccc-cccccceeeCCCc-----ceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEE
Confidence 344 4569999999999 78888888888888877888988887632 1234567788888888887788999988
Q ss_pred EccCCceeE-----EEEcC------CcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec----C-------Ccce
Q 019326 158 NLVRGRRSF-----YHKIG------KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD----G-------KKRI 214 (343)
Q Consensus 158 d~~~~~~~~-----~~~~~------~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~----~-------~~~i 214 (343)
.+..+.... ...++ .....++|+|.+..++.+ ..+-+.+|........-... + -..+
T Consensus 156 ~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~Dv 235 (316)
T COG3204 156 TVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDV 235 (316)
T ss_pred EEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeecc
Confidence 887664222 12221 234569999999999999 78888888776433111111 1 1235
Q ss_pred EEeeec--CCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 215 LCAAPG--ENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 215 ~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
..+.+. .+.+++-+.+++.+.-.|.. |+++..+.
T Consensus 236 Sgl~~~~~~~~LLVLS~ESr~l~Evd~~-G~~~~~ls 271 (316)
T COG3204 236 SGLEFNAITNSLLVLSDESRRLLEVDLS-GEVIELLS 271 (316)
T ss_pred ccceecCCCCcEEEEecCCceEEEEecC-CCeeeeEE
Confidence 566666 45678888888888888876 55544443
No 375
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.71 E-value=0.019 Score=47.29 Aligned_cols=199 Identities=14% Similarity=0.082 Sum_probs=115.9
Q ss_pred ceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeee----
Q 019326 53 TAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKV---- 128 (343)
Q Consensus 53 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---- 128 (343)
.++++--..+.|.-|+..+++.. .+... ..+.++.....+ ..|+++.. -+.+++.+++..+..+..
T Consensus 38 ~L~w~DI~~~~i~r~~~~~g~~~-~~~~p--~~~~~~~~~d~~-----g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~~ 107 (307)
T COG3386 38 ALLWVDILGGRIHRLDPETGKKR-VFPSP--GGFSSGALIDAG-----GRLIACEH--GVRLLDPDTGGKITLLAEPEDG 107 (307)
T ss_pred EEEEEeCCCCeEEEecCCcCceE-EEECC--CCcccceeecCC-----CeEEEEcc--ccEEEeccCCceeEEeccccCC
Confidence 35666667788888988766432 33322 334454444443 35555444 355667655544333221
Q ss_pred -ccccEEEEEEecCCCEEEEEeC-----------CCeEEEEEccCCceeEEEEc-CCcceEEEEeCCCCEEEEE--eCCc
Q 019326 129 -HKKGVNDLAVHHSGKLALTVGR-----------DDCLAMVNLVRGRRSFYHKI-GKEASLIKFDGSGEKFFMV--TEEK 193 (343)
Q Consensus 129 -~~~~v~~i~~~~~~~~l~~~~~-----------d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~ 193 (343)
.....+.....|+|.+.++... -|.++.+|. .+........ -...+.++|+|+++.++.+ ..+.
T Consensus 108 ~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~ 186 (307)
T COG3386 108 LPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANR 186 (307)
T ss_pred CCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCe
Confidence 1135667888898876665444 133444443 3444333333 3456779999999999999 3477
Q ss_pred EEEEEccc--cee-----EEEec-CCcceEEeeecCCCeEE-EEeCCC-cEEEEECCCCceeEEecccccccEEEEEEEe
Q 019326 194 VGIHQAED--AKL-----LCELD-GKKRILCAAPGENGVLF-TGGEDR-SITAWDTNSGKVAYCIEDAHSARVKGIVVLT 263 (343)
Q Consensus 194 i~~~d~~~--~~~-----~~~~~-~~~~i~~~~~~~~~~l~-~~~~dg-~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~ 263 (343)
+.-|++.. +.. ...+. ..+..-.++...+..+. ++-.+| .|.+|+.. ++.+..+. -....+++++|-.
T Consensus 187 i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~-lP~~~~t~~~FgG 264 (307)
T COG3386 187 IHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIK-LPVKRPTNPAFGG 264 (307)
T ss_pred EEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEE-CCCCCCccceEeC
Confidence 77777652 111 11111 23444555555344444 444443 89999999 99999888 5557788888876
Q ss_pred c
Q 019326 264 K 264 (343)
Q Consensus 264 ~ 264 (343)
.
T Consensus 265 ~ 265 (307)
T COG3386 265 P 265 (307)
T ss_pred C
Confidence 4
No 376
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.67 E-value=0.018 Score=45.71 Aligned_cols=221 Identities=17% Similarity=0.239 Sum_probs=130.7
Q ss_pred CceEEEeeCCCe-EEEEEcCCCeeeeEeccCCC-CCeEEEEEeCCCCCCCCceEEEeeCC-----CeEEEEECCC-ccee
Q 019326 52 GTAAASGGTDDT-IHLYDLSTSSSLGAIHHHES-SSVTSLAFYTPQNLSVPRNLFSTSAD-----GFVSIFDADP-FVLL 123 (343)
Q Consensus 52 ~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~-~~~~ 123 (343)
+.-++.+-.-|+ ..++|.++.+....+...+. .---.=.|+|++ .+|.+.-.| |.|-|||.+. .+.+
T Consensus 80 ~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG-----~~LYATEndfd~~rGViGvYd~r~~fqrv 154 (366)
T COG3490 80 PRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDG-----RLLYATENDFDPNRGVIGVYDAREGFQRV 154 (366)
T ss_pred cceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCC-----cEEEeecCCCCCCCceEEEEeccccccee
Confidence 344555555444 45778877766655533211 111223689999 677665443 6899999864 4567
Q ss_pred eeeeeccccEEEEEEecCCCEEEEEeC------------------CCeEEEEEccCCceeEEEEcC-----CcceEEEEe
Q 019326 124 TSVKVHKKGVNDLAVHHSGKLALTVGR------------------DDCLAMVNLVRGRRSFYHKIG-----KEASLIKFD 180 (343)
Q Consensus 124 ~~~~~~~~~v~~i~~~~~~~~l~~~~~------------------d~~i~~wd~~~~~~~~~~~~~-----~~~~~~~~~ 180 (343)
.++..|.-....+.+.+||+.++.+.. .-++.+.|..+++.+....++ -.+..++..
T Consensus 155 gE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g 234 (366)
T COG3490 155 GEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIG 234 (366)
T ss_pred cccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeC
Confidence 788888878888999999998887642 112334444455544444333 345667888
Q ss_pred CCCCEEEEE-eCCc-----EEEEEcccceeEEEecC--------CcceEEeeec-CCCeE-EEEeCCCcEEEEECCCCce
Q 019326 181 GSGEKFFMV-TEEK-----VGIHQAEDAKLLCELDG--------KKRILCAAPG-ENGVL-FTGGEDRSITAWDTNSGKV 244 (343)
Q Consensus 181 ~~~~~~~~~-~~~~-----i~~~d~~~~~~~~~~~~--------~~~i~~~~~~-~~~~l-~~~~~dg~i~i~d~~~~~~ 244 (343)
+++..++.+ ..|. -.+=-...++.+.-+.. ...|-+++.+ ...++ +++-..+...+||..+|..
T Consensus 235 ~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~v 314 (366)
T COG3490 235 RDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAV 314 (366)
T ss_pred CCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcE
Confidence 888877777 3221 22223334455544442 2456677776 23444 4444566788999999987
Q ss_pred eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 245 AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 245 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
+..-. -.....++....+ ++..+.+|.+.++.-
T Consensus 315 v~~a~---l~daaGva~~~~g-----------f~vssg~G~~~~~s~ 347 (366)
T COG3490 315 VSEAA---LPDAAGVAAAKGG-----------FAVSSGQGRIIFYSR 347 (366)
T ss_pred Eeccc---ccccccceeccCc-----------eEEecCCceEEeccc
Confidence 65533 2223344443332 555566888888743
No 377
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.67 E-value=0.017 Score=45.77 Aligned_cols=191 Identities=12% Similarity=0.062 Sum_probs=112.9
Q ss_pred eeeeeeeccc--cEEEEEEecCCCEEEEEeCCC--eEEEEEccCCceeEEEEcCCcc--eEEEEeCCCCEEEEE-eCCcE
Q 019326 122 LLTSVKVHKK--GVNDLAVHHSGKLALTVGRDD--CLAMVNLVRGRRSFYHKIGKEA--SLIKFDGSGEKFFMV-TEEKV 194 (343)
Q Consensus 122 ~~~~~~~~~~--~v~~i~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~i 194 (343)
.+.++. |.. -...+.|..++.++-+.+.-| .|+.+|+.+++......++... ..++...+ +..... .++..
T Consensus 35 vv~~yp-Hd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d-~l~qLTWk~~~~ 112 (264)
T PF05096_consen 35 VVETYP-HDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGD-KLYQLTWKEGTG 112 (264)
T ss_dssp EEEEEE---TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETT-EEEEEESSSSEE
T ss_pred EEEECC-CCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECC-EEEEEEecCCeE
Confidence 344444 433 456678877888888888876 6999999999988887777543 34555543 333334 89999
Q ss_pred EEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEeccc-cc---ccEEEEEEEecCCCCCC
Q 019326 195 GIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDA-HS---ARVKGIVVLTKNDGGST 270 (343)
Q Consensus 195 ~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-h~---~~v~~~~~~~~~~~~~~ 270 (343)
.+||..+.+.+.++.....=..++. ++..|+.......|+.+|..+.+....+.-. .. ..++.|.+.. +.
T Consensus 113 f~yd~~tl~~~~~~~y~~EGWGLt~-dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~-G~---- 186 (264)
T PF05096_consen 113 FVYDPNTLKKIGTFPYPGEGWGLTS-DGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYIN-GK---- 186 (264)
T ss_dssp EEEETTTTEEEEEEE-SSS--EEEE-CSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEET-TE----
T ss_pred EEEccccceEEEEEecCCcceEEEc-CCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEEc-CE----
Confidence 9999999999999987777777775 6677777777888999999888777666511 12 2345555542 21
Q ss_pred CCCCeEEEEEcCCCcEEEEeccCccccCCCccc-----------ccccccceeEEEcCCCC-ceecc
Q 019326 271 AENPYLVASASSDGVICVWDVRMAIKEKPLPLA-----------EAKTNSRLTCLAGSSTK-SFKRP 325 (343)
Q Consensus 271 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-----------~~~~~~~i~~~~~s~~~-~~~~~ 325 (343)
..|-.=....|..-|..++.......+. ......-.+.+|+.+.. ++.+.
T Consensus 187 -----IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vT 248 (264)
T PF05096_consen 187 -----IYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVT 248 (264)
T ss_dssp -----EEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEE
T ss_pred -----EEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEE
Confidence 4444444445555566655322111111 11123457889996654 44443
No 378
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.63 E-value=0.033 Score=47.88 Aligned_cols=197 Identities=16% Similarity=0.239 Sum_probs=136.1
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC---CCeEEEEEccC
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR---DDCLAMVNLVR 161 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~---d~~i~~wd~~~ 161 (343)
.-..++.++.+. +.++....++.|.+.|..+.+.......-. ....++++|+++.+.++.. ++++.+.|..+
T Consensus 75 ~p~~i~v~~~~~----~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t 149 (381)
T COG3391 75 YPAGVAVNPAGN----KVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAAT 149 (381)
T ss_pred cccceeeCCCCC----eEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCC
Confidence 345677777772 456666667899999988777666665333 5678999999977776665 68999999998
Q ss_pred CceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEE-E----ecCCcceEEeeec-CCCeEEEEeC-C-
Q 019326 162 GRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLC-E----LDGKKRILCAAPG-ENGVLFTGGE-D- 231 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~-~----~~~~~~i~~~~~~-~~~~l~~~~~-d- 231 (343)
++.............++++|+++.++.+ .++.+.++|.......+ . ..-......+.+. ++.+++.... +
T Consensus 150 ~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~ 229 (381)
T COG3391 150 NKVTATIPVGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSG 229 (381)
T ss_pred CeEEEEEecCCCcceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCC
Confidence 8887776665555889999999988888 58999999977766664 1 2212222334444 4454443333 2
Q ss_pred -CcEEEEECCCCceeEE-ecccccccEEEEEEEecCCCCCCCCCCeEEEEE-cCCCcEEEEeccCccc
Q 019326 232 -RSITAWDTNSGKVAYC-IEDAHSARVKGIVVLTKNDGGSTAENPYLVASA-SSDGVICVWDVRMAIK 296 (343)
Q Consensus 232 -g~i~i~d~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~ 296 (343)
+.+...|..++..... ...+.. ....+.+.|.+. .+... +..+.+.+-|..+...
T Consensus 230 ~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~---------~~yv~~~~~~~V~vid~~~~~v 287 (381)
T COG3391 230 SNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGK---------AAYVANSQGGTVSVIDGATDRV 287 (381)
T ss_pred CceEEEEeCCCceEEEeccccccC-CCCceeECCCCC---------EEEEEecCCCeEEEEeCCCCce
Confidence 6899999988876665 221222 556778888877 66666 4458888888887643
No 379
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.63 E-value=0.00037 Score=60.47 Aligned_cols=89 Identities=12% Similarity=0.108 Sum_probs=75.4
Q ss_pred ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcce-EEEEeCCCCEEEEE-eCCcEEEEEcccceeEEE
Q 019326 131 KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEAS-LIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCE 207 (343)
Q Consensus 131 ~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~ 207 (343)
..+.-+.|+|.-..+|.+..+|.+.++.+. .+++..++ .+..+. +++|.|+|+.++++ .||+|++.|..++..+..
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~ 99 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS 99 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence 467789999999999999999999999988 66677666 445565 89999999999999 999999999999988887
Q ss_pred --ecCCcceEEeeec
Q 019326 208 --LDGKKRILCAAPG 220 (343)
Q Consensus 208 --~~~~~~i~~~~~~ 220 (343)
+.....|.++.|+
T Consensus 100 ~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 100 FLFSVETDISKGIWD 114 (665)
T ss_pred cccccccchheeecc
Confidence 4466778888774
No 380
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.57 E-value=0.0036 Score=53.64 Aligned_cols=143 Identities=12% Similarity=0.150 Sum_probs=102.4
Q ss_pred eEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCC--CCCceEEEeeCCCeEEEEECCCc-c-eeeeeeec
Q 019326 54 AAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNL--SVPRNLFSTSADGFVSIFDADPF-V-LLTSVKVH 129 (343)
Q Consensus 54 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~-~-~~~~~~~~ 129 (343)
+|.++.....++-.|++.|+.+.++..+ ..|+-+.+.|+... ..+..-+.|-.|..|.-||.+-. . .+..-++|
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~--~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~k 425 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFE--DDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSK 425 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeecc--CCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecc
Confidence 4556777777999999999999999988 34888888887643 11233455667888999998532 1 22222222
Q ss_pred c----ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCce--eEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcc
Q 019326 130 K----KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR--SFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAE 200 (343)
Q Consensus 130 ~----~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 200 (343)
. ....|++-..+| ++++|+.+|.|++||- .+.. .....++.+|..+..+.+|+++++..+..+.+.++.
T Consensus 426 qy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~tyLlLi~t~ 500 (644)
T KOG2395|consen 426 QYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCKTYLLLIDTL 500 (644)
T ss_pred ccccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEecccEEEEEEEe
Confidence 2 244555555554 8999999999999996 4443 334556789999999999999999999888888764
No 381
>PHA02713 hypothetical protein; Provisional
Probab=97.54 E-value=0.011 Score=53.56 Aligned_cols=211 Identities=9% Similarity=0.031 Sum_probs=106.5
Q ss_pred eEEEEEcCCCeeee--EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC------CeEEEEECCCcc--eeeeeeecccc
Q 019326 63 TIHLYDLSTSSSLG--AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD------GFVSIFDADPFV--LLTSVKVHKKG 132 (343)
Q Consensus 63 ~i~iwd~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~--~~~~~~~~~~~ 132 (343)
.+..||..+++... .+... .. -.+++.. ++ ..++.|+.+ ..+..||..+.+ .+..+......
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~-r~-~~~~a~l-~~-----~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~ 344 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNH-II-NYASAIV-DN-----EIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCR 344 (557)
T ss_pred CEEEEeCCCCeEEECCCCCcc-cc-ceEEEEE-CC-----EEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhc
Confidence 56778887764322 22211 11 1223333 33 577777753 357788876543 22222211111
Q ss_pred EEEEEEecCCCEEEEEeCCC-----eEEEEEccCCceeEEEEcCCcceEE-EEeCCCCEEEEE-eC--------------
Q 019326 133 VNDLAVHHSGKLALTVGRDD-----CLAMVNLVRGRRSFYHKIGKEASLI-KFDGSGEKFFMV-TE-------------- 191 (343)
Q Consensus 133 v~~i~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~-------------- 191 (343)
. +++ .-+++..+.||.++ .+..||..+++-......+.+.... ...-++...+.+ .+
T Consensus 345 ~-~~~-~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~ 422 (557)
T PHA02713 345 F-SLA-VIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSI 422 (557)
T ss_pred e-eEE-EECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEECCEEEEEeCCCcccccccccccccc
Confidence 1 122 22567777887653 4788998877644333333222211 112255655555 22
Q ss_pred ---------CcEEEEEcccceeEEEec--CCcceEEeeecCCCeEEEEeCC------CcEEEEECCC-Cc--eeEEeccc
Q 019326 192 ---------EKVGIHQAEDAKLLCELD--GKKRILCAAPGENGVLFTGGED------RSITAWDTNS-GK--VAYCIEDA 251 (343)
Q Consensus 192 ---------~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d------g~i~i~d~~~-~~--~~~~~~~~ 251 (343)
..+..||..+.+-...-. ....-.+++..++.+.+.|+.+ ..+..||..+ .+ .+..++ .
T Consensus 423 ~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~-~ 501 (557)
T PHA02713 423 DMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTE-S 501 (557)
T ss_pred cccccccccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccC-c
Confidence 246678877654332211 1111122333366666677654 2467899886 33 333443 2
Q ss_pred ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCC--cEEEEeccCcc
Q 019326 252 HSARVKGIVVLTKNDGGSTAENPYLVASASSDG--VICVWDVRMAI 295 (343)
Q Consensus 252 h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~ 295 (343)
.... .+++.. ++. +.+.|+.|| .+..||..+.+
T Consensus 502 ~r~~-~~~~~~-~~~---------iyv~Gg~~~~~~~e~yd~~~~~ 536 (557)
T PHA02713 502 RLSA-LHTILH-DNT---------IMMLHCYESYMLQDTFNVYTYE 536 (557)
T ss_pred cccc-ceeEEE-CCE---------EEEEeeecceeehhhcCccccc
Confidence 2222 233332 222 888999888 67778887753
No 382
>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Probab=97.49 E-value=0.023 Score=49.44 Aligned_cols=264 Identities=13% Similarity=0.047 Sum_probs=138.1
Q ss_pred CCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc
Q 019326 43 SPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV 121 (343)
Q Consensus 43 ~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 121 (343)
.+|..+..+ ...|..|+.+| |.+.+.+..+.......-....|..+.-...+ .+..|+..|..+.--.+.+-
T Consensus 206 k~I~al~~d~qg~LWVGTdqG-v~~~e~~G~~~sn~~~~lp~~~I~ll~qD~qG------~lWiGTenGl~r~~l~rq~L 278 (671)
T COG3292 206 KAINALIADVQGRLWVGTDQG-VYLQEAEGWRASNWGPMLPSGNILLLVQDAQG------ELWIGTENGLWRTRLPRQGL 278 (671)
T ss_pred hhHHHHHHHhcCcEEEEeccc-eEEEchhhccccccCCCCcchheeeeecccCC------CEEEeecccceeEecCCCCc
Confidence 567777666 77889999888 77877776433332222224566666555555 78888888765433333322
Q ss_pred eeeeeeecc--ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC-CcceEEEEeC--CCCEEEEE-eCCcEE
Q 019326 122 LLTSVKVHK--KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG-KEASLIKFDG--SGEKFFMV-TEEKVG 195 (343)
Q Consensus 122 ~~~~~~~~~--~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~-~~~~i~ 195 (343)
.+...+.|. ..|.++..+.+|. +.+++.++.+++-+-.-.........+ ..+..++..| .+..+... +-+.+.
T Consensus 279 q~~~~~~~l~~S~vnsL~~D~dGs-LWv~t~~giv~~~~a~w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~ 357 (671)
T COG3292 279 QIPLSKMHLGVSTVNSLWLDTDGS-LWVGTYGGIVRYLTADWKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELM 357 (671)
T ss_pred cccccccCCccccccceeeccCCC-EeeeccCceEEEecchhhheeeeecCCCchhhhhccCchhcccceeeccccceEE
Confidence 222222222 3566666666664 566666665554332211111111111 1111122222 11111111 233344
Q ss_pred EEEcccceeEEEec--CCcceEEeeecCCCeEEEEeCCCcEEEEECCC-CceeEEecccccccEEEEEEEecCCCCCCCC
Q 019326 196 IHQAEDAKLLCELD--GKKRILCAAPGENGVLFTGGEDRSITAWDTNS-GKVAYCIEDAHSARVKGIVVLTKNDGGSTAE 272 (343)
Q Consensus 196 ~~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 272 (343)
+-+-.++..++... ....|+..++..+..+..|+...-+..|+..+ +-.+.........+|..+.-.|++.
T Consensus 358 van~stG~~v~sv~q~Rg~nit~~~~d~~g~lWlgs~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dns------ 431 (671)
T COG3292 358 VANGSTGELVRSVHQLRGMNITTTLEDSRGRLWLGSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNS------ 431 (671)
T ss_pred EecCCCCcEEEEeeeccccccchhhhccCCcEEEEecccchhhhccCCcccccccccCCcccceeeeeecCCCC------
Confidence 44555555554432 23456666665567788888875677787776 4444444434567788777766663
Q ss_pred CCeEEEEEcCCCcEEEEeccCccc-cCCCcccccccccceeEEEcCCCCceecc
Q 019326 273 NPYLVASASSDGVICVWDVRMAIK-EKPLPLAEAKTNSRLTCLAGSSTKSFKRP 325 (343)
Q Consensus 273 ~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~~~~ 325 (343)
|..|+.+|.++. +.+.+.- ....+-......+.+..+...+++++-+.
T Consensus 432 ----LWIGTs~Glvk~-~pe~~~v~n~ln~~~~~l~~s~~~~lg~~~~g~Lw~a 480 (671)
T COG3292 432 ----LWIGTSGGLVKR-DPESGRVLNLLNPGSHGLDGSRVEQLGLGPDGRLWLA 480 (671)
T ss_pred ----EEEeccCCeEec-CccccchhcccccccCcCCcchhhhhccCCCCceEEE
Confidence 888888885543 2222211 11111122333455777888888777543
No 383
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.47 E-value=0.0048 Score=57.31 Aligned_cols=109 Identities=19% Similarity=0.228 Sum_probs=78.7
Q ss_pred eEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceee
Q 019326 45 ITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLT 124 (343)
Q Consensus 45 v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 124 (343)
+.+.+.-+..++.|+..|.+-..|....-.......+..++|++++|+.++ ..++.|-.+|.|.+||...++..+
T Consensus 92 v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg-----~~l~~G~~~G~V~v~D~~~~k~l~ 166 (1206)
T KOG2079|consen 92 VISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDG-----SLLLAGLGDGHVTVWDMHRAKILK 166 (1206)
T ss_pred eeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCC-----ceeccccCCCcEEEEEccCCccee
Confidence 444444477888999999999988775422111122336899999999999 899999999999999999999998
Q ss_pred eeeeccccEEEEE---EecCCCEEEEEeCCCeEEEEEcc
Q 019326 125 SVKVHKKGVNDLA---VHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 125 ~~~~~~~~v~~i~---~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
.+..|..+...+- +..++..++++...|. +|.+.
T Consensus 167 ~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv 203 (1206)
T KOG2079|consen 167 VITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKLV 203 (1206)
T ss_pred eeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence 8887776555443 3445556777776665 55543
No 384
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=97.45 E-value=0.037 Score=50.11 Aligned_cols=219 Identities=16% Similarity=0.203 Sum_probs=115.2
Q ss_pred eEEeccC------CeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCC------CeEEEEEc
Q 019326 3 LIAGSYE------KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTD------DTIHLYDL 69 (343)
Q Consensus 3 l~~g~~d------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~d------g~i~iwd~ 69 (343)
+++|+.+ ..+..||..+. .......+..... -.+++.. +...++||.| .++..||.
T Consensus 288 ~~vGG~~~~~~~~~~ve~yd~~~~----------~w~~~a~m~~~r~-~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~ 356 (571)
T KOG4441|consen 288 VAVGGYNRQGQSLRSVECYDPKTN----------EWSSLAPMPSPRC-RVGVAVLNGKLYVVGGYDSGSDRLSSVERYDP 356 (571)
T ss_pred EEECCCCCCCcccceeEEecCCcC----------cEeecCCCCcccc-cccEEEECCEEEEEccccCCCcccceEEEecC
Confidence 3555555 35667776651 1223333332222 3344444 7788889988 34777888
Q ss_pred CCCeeee--EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC-----eEEEEECCCcc--eeeeeeeccccEEEEEEec
Q 019326 70 STSSSLG--AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG-----FVSIFDADPFV--LLTSVKVHKKGVNDLAVHH 140 (343)
Q Consensus 70 ~~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~ 140 (343)
.+++-.. .+... .... .++.. ++ ...++|+.|| ++-.||..+.+ .+..+.......... .-
T Consensus 357 ~~~~W~~~a~M~~~-R~~~-~v~~l-~g-----~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~--~~ 426 (571)
T KOG4441|consen 357 RTNQWTPVAPMNTK-RSDF-GVAVL-DG-----KLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVA--VL 426 (571)
T ss_pred CCCceeccCCccCc-cccc-eeEEE-CC-----EEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEE--EE
Confidence 7765332 22222 1112 22222 33 5888899886 47778875532 333222111112222 22
Q ss_pred CCCEEEEEeCC------CeEEEEEccCCceeEEEEcCCcceE--EEEeCCCCEEEEE-eCC-----cEEEEEcccceeEE
Q 019326 141 SGKLALTVGRD------DCLAMVNLVRGRRSFYHKIGKEASL--IKFDGSGEKFFMV-TEE-----KVGIHQAEDAKLLC 206 (343)
Q Consensus 141 ~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~-----~i~~~d~~~~~~~~ 206 (343)
+|...++||.+ .++..||..+++..........-.. ++. -++...+++ .++ .+..||..+.+...
T Consensus 427 ~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~-~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~ 505 (571)
T KOG4441|consen 427 GGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAV-LNGKIYVVGGFDGTSALSSVERYDPETNQWTM 505 (571)
T ss_pred CCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEE-ECCEEEEECCccCCCccceEEEEcCCCCceeE
Confidence 56777888754 4577888888875554444322222 222 244455555 343 26778887765444
Q ss_pred Ee--cCCcceEEeeecCCCeEEEEeCCCc-----EEEEECCCCc
Q 019326 207 EL--DGKKRILCAAPGENGVLFTGGEDRS-----ITAWDTNSGK 243 (343)
Q Consensus 207 ~~--~~~~~i~~~~~~~~~~l~~~~~dg~-----i~i~d~~~~~ 243 (343)
.- .....-..++..++...++|+.||. |..||..+.+
T Consensus 506 v~~m~~~rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d~ 549 (571)
T KOG4441|consen 506 VAPMTSPRSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETDT 549 (571)
T ss_pred cccCccccccccEEEECCEEEEEecccCccccceeEEcCCCCCc
Confidence 32 2222222333336777788887754 6667766543
No 385
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=97.38 E-value=0.00052 Score=52.14 Aligned_cols=104 Identities=14% Similarity=0.135 Sum_probs=62.4
Q ss_pred CceEEEeeCCCeEEEEEcCCCeee-eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecc
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSL-GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHK 130 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 130 (343)
+..++.|+.+|.|.+|+....... ..+... ...|.++--.-.. ..+..+++.||.|+.|++...+.+...-.|.
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~-~e~i~~~Ip~~~~----~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~ 144 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSG-EESIDLGIPNGRD----SSLGCVGAQDGRIRACNIKPNKVLGYVGQHN 144 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcc-cccceeccccccc----cceeEEeccCCceeeeccccCceeeeecccc
Confidence 678999999999999988732211 112222 2333333222111 2588899999999999999888777766666
Q ss_pred -ccEEEEEEecCCCEEEEE--eCCCeEEEEEcc
Q 019326 131 -KGVNDLAVHHSGKLALTV--GRDDCLAMVNLV 160 (343)
Q Consensus 131 -~~v~~i~~~~~~~~l~~~--~~d~~i~~wd~~ 160 (343)
.++........++.+..+ +.|..++.|++.
T Consensus 145 ~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 145 FESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred CCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 344433334344444444 444555555544
No 386
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.36 E-value=0.087 Score=46.06 Aligned_cols=233 Identities=13% Similarity=0.140 Sum_probs=122.4
Q ss_pred EEEec--CceEEEe-eCCC----eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC----------
Q 019326 47 TVAVS--GTAAASG-GTDD----TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD---------- 109 (343)
Q Consensus 47 ~l~~~--~~~l~s~-~~dg----~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d---------- 109 (343)
..+++ ++++|.+ +..| .++++|+++++.+...-.. ..-..+.|.+++ +.|+....+
T Consensus 128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~--~~~~~~~W~~d~-----~~~~y~~~~~~~~~~~~~~ 200 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN--PKFSSVSWSDDG-----KGFFYTRFDEDQRTSDSGY 200 (414)
T ss_dssp EEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE--EESEEEEECTTS-----SEEEEEECSTTTSS-CCGC
T ss_pred eeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc--cccceEEEeCCC-----CEEEEEEeCcccccccCCC
Confidence 34555 7766643 3333 4999999999876543222 222349999997 455444332
Q ss_pred -CeEEEEECCCccee--eeeeecccc--EEEEEEecCCCEEEEEeC---C-CeEEEEEccCC-----ceeEEEEcCCcce
Q 019326 110 -GFVSIFDADPFVLL--TSVKVHKKG--VNDLAVHHSGKLALTVGR---D-DCLAMVNLVRG-----RRSFYHKIGKEAS 175 (343)
Q Consensus 110 -g~i~iwd~~~~~~~--~~~~~~~~~--v~~i~~~~~~~~l~~~~~---d-~~i~~wd~~~~-----~~~~~~~~~~~~~ 175 (343)
..|+.|.+.+...- ..+...... ...+..++++++++.... + ..+.+.|+..+ ...........+.
T Consensus 201 ~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~ 280 (414)
T PF02897_consen 201 PRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVE 280 (414)
T ss_dssp CEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-E
T ss_pred CcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceE
Confidence 23788888665432 333333332 567889999998775443 2 35788888775 2222222222333
Q ss_pred E-EEEeCCCCEEEEE----eCCcEEEEEccccee---E-EEecCCc--ceEEeeecCCCeEEEEeCCC--cEEEEECCCC
Q 019326 176 L-IKFDGSGEKFFMV----TEEKVGIHQAEDAKL---L-CELDGKK--RILCAAPGENGVLFTGGEDR--SITAWDTNSG 242 (343)
Q Consensus 176 ~-~~~~~~~~~~~~~----~~~~i~~~d~~~~~~---~-~~~~~~~--~i~~~~~~~~~~l~~~~~dg--~i~i~d~~~~ 242 (343)
. +... .+.+++.. ..+.|...++.+... . ..+.+.. .+..+....+.+++.-..++ .|+++++..+
T Consensus 281 ~~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~ 359 (414)
T PF02897_consen 281 YYVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDG 359 (414)
T ss_dssp EEEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-T
T ss_pred EEEEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCC
Confidence 2 3333 44444444 245566677776542 2 2223333 46666664555666665555 4888998844
Q ss_pred ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEE-EcCC--CcEEEEeccCcc
Q 019326 243 KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVAS-ASSD--GVICVWDVRMAI 295 (343)
Q Consensus 243 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s-~~~d--g~i~vwd~~~~~ 295 (343)
.....+...-.+.|..+...+..+ .+.++ .|.- +++.-||+.+++
T Consensus 360 ~~~~~~~~p~~g~v~~~~~~~~~~--------~~~~~~ss~~~P~~~y~~d~~t~~ 407 (414)
T PF02897_consen 360 KESREIPLPEAGSVSGVSGDFDSD--------ELRFSYSSFTTPPTVYRYDLATGE 407 (414)
T ss_dssp EEEEEEESSSSSEEEEEES-TT-S--------EEEEEEEETTEEEEEEEEETTTTC
T ss_pred cEEeeecCCcceEEeccCCCCCCC--------EEEEEEeCCCCCCEEEEEECCCCC
Confidence 445444423334455544333322 13333 3322 567777777763
No 387
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=97.34 E-value=0.13 Score=47.89 Aligned_cols=316 Identities=12% Similarity=0.096 Sum_probs=162.6
Q ss_pred CeeEEeccCCeEEEEEeecCCCCCCCCcceee-EEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeee---
Q 019326 1 MSLIAGSYEKFIWGYKLKPSNHYSSDQKTLTL-TQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSL--- 75 (343)
Q Consensus 1 ~~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~--- 75 (343)
++.+.|..+|.+...-+... ++.... .....+-+...-..|+.+- ...|++|+.-|.=++-.+.+....
T Consensus 270 ~~yLl~d~~G~Lf~l~l~~~------~e~~s~~~lkve~lge~siassi~~L~ng~lFvGS~~gdSqLi~L~~e~d~gsy 343 (1096)
T KOG1897|consen 270 SRYLLGDEDGMLFKLLLSHT------GETVSGLDLKVEYLGETSIASSINYLDNGVLFVGSRFGDSQLIKLNTEPDVGSY 343 (1096)
T ss_pred cEEEEecCCCcEEEEEeecc------cccccceEEEEEecCCcchhhhhhcccCceEEEeccCCceeeEEccccCCCCch
Confidence 35677888888877666521 111111 1112222455556666665 788999998887677666554322
Q ss_pred ----eEeccCCCCCeEEEEEeCCCCCCCCceEEEee---CCCeEEEEECCCc-ceeee--eeeccccEEEEE--EecCC-
Q 019326 76 ----GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS---ADGFVSIFDADPF-VLLTS--VKVHKKGVNDLA--VHHSG- 142 (343)
Q Consensus 76 ----~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~-~~~~~--~~~~~~~v~~i~--~~~~~- 142 (343)
.++.. -++|..++........ ...+++++ .||++++..-.-+ ..+.. +.+ -..++.+. ++++-
T Consensus 344 ~~ilet~~N--LgPI~Dm~Vvd~d~q~-q~qivtCsGa~kdgSLRiiRngi~I~e~A~i~l~G-ikg~w~lk~~v~~~~d 419 (1096)
T KOG1897|consen 344 VVILETFVN--LGPIVDMCVVDLDRQG-QGQIVTCSGAFKDGSLRIIRNGIGIDELASIDLPG-IKGMWSLKSMVDENYD 419 (1096)
T ss_pred hhhhhhccc--ccceeeEEEEeccccC-CceEEEEeCCCCCCcEEEEecccccceeeEeecCC-ccceeEeeccccccCC
Confidence 33333 3788888876544212 24555554 3899999864221 12222 222 23455665 43321
Q ss_pred CEEEEEeCCCeEEEEEccCC-ceeEEEEcCCcceEEEE-eCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeec
Q 019326 143 KLALTVGRDDCLAMVNLVRG-RRSFYHKIGKEASLIKF-DGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPG 220 (343)
Q Consensus 143 ~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~ 220 (343)
.+++.+-.+. -++..+... +......+......+.. .-.++.++=.....|++++-. .....+..+..++....+
T Consensus 420 ~ylvlsf~~e-Trvl~i~~e~ee~~~~gf~~~~~Tif~S~i~g~~lvQvTs~~iRl~ss~--~~~~~W~~p~~~ti~~~~ 496 (1096)
T KOG1897|consen 420 NYLVLSFISE-TRVLNISEEVEETEDPGFSTDEQTIFCSTINGNQLVQVTSNSIRLVSSA--GLRSEWRPPGKITIGVVS 496 (1096)
T ss_pred cEEEEEeccc-eEEEEEccceEEeccccccccCceEEEEccCCceEEEEecccEEEEcch--hhhhcccCCCceEEEEEe
Confidence 3555444333 333343222 11111111222222222 234555555567778888755 233344444444443333
Q ss_pred -CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC-ccccC
Q 019326 221 -ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM-AIKEK 298 (343)
Q Consensus 221 -~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~ 298 (343)
+...++.++.++.+...++..+.....-.......|.|+.++|.++.+ ...++++.|.++..+.+--... .....
T Consensus 497 ~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~---~~s~~~aVG~Ws~~~~~l~~~pd~~~~~ 573 (1096)
T KOG1897|consen 497 ANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAP---NKSRLLAVGLWSDISMILTFLPDLILIT 573 (1096)
T ss_pred ecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCC---CcceEEEEEeecceEEEEEECCCcceee
Confidence 455667777777787777776652222222345789999999886532 1234888888877665543322 21111
Q ss_pred CCcccccccccceeEEEcCCCCceeccccCCCCC
Q 019326 299 PLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAP 332 (343)
Q Consensus 299 ~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~ 332 (343)
...+.....+..|.-..+-.|..|+..+.++|..
T Consensus 574 ~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l 607 (1096)
T KOG1897|consen 574 HEQLSGEIIPRSILLTTFEGDIHYLLVALGDGAL 607 (1096)
T ss_pred eeccCCCccchheeeEEeeccceEEEEEcCCceE
Confidence 1111111122235555555667777777777743
No 388
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=97.30 E-value=0.092 Score=45.10 Aligned_cols=191 Identities=16% Similarity=0.097 Sum_probs=118.9
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCC-CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecc
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHE-SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHK 130 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 130 (343)
+..++.+..+|.|.-.|.++++.+....... ...+..-.+..++ .++.++.++.++.+|.++++.+.......
T Consensus 68 dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G------~i~~g~~~g~~y~ld~~~G~~~W~~~~~~ 141 (370)
T COG1520 68 DGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDG------KIYVGSWDGKLYALDASTGTLVWSRNVGG 141 (370)
T ss_pred CCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCC------eEEEecccceEEEEECCCCcEEEEEecCC
Confidence 6667777889999999999998766443320 1233333333356 68899999999999998999988887655
Q ss_pred -ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCc----ceEEEEeCCCCEEEEEe--CCcEEEEEcccce
Q 019326 131 -KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKE----ASLIKFDGSGEKFFMVT--EEKVGIHQAEDAK 203 (343)
Q Consensus 131 -~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~i~~~d~~~~~ 203 (343)
..+..-..-.++ .+..++.++.+...|..++........... +..-....++..++... ++.+.-+|..++.
T Consensus 142 ~~~~~~~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~ 220 (370)
T COG1520 142 SPYYASPPVVGDG-TVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASGTVYVGSDGYDGILYALNAEDGT 220 (370)
T ss_pred CeEEecCcEEcCc-EEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecceEEEecCCCcceEEEEEccCCc
Confidence 111222222233 444444789999999998888766555432 11111122333333334 5567778888888
Q ss_pred eEEEecCCcceEE-----e-eec-----CCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 204 LLCELDGKKRILC-----A-APG-----ENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 204 ~~~~~~~~~~i~~-----~-~~~-----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
.....+....+.. . ... -+.-++.++.++.+...|..+++.+.++.
T Consensus 221 ~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~ 277 (370)
T COG1520 221 LKWSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELIWSFP 277 (370)
T ss_pred EeeeeeeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceEEEEe
Confidence 7777431111110 1 111 13344677778889999999999999988
No 389
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.30 E-value=0.075 Score=48.29 Aligned_cols=196 Identities=13% Similarity=0.093 Sum_probs=104.6
Q ss_pred CCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEe------CCC--eEEEEEccCCceeEEEEcCCcceEEEEe
Q 019326 109 DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVG------RDD--CLAMVNLVRGRRSFYHKIGKEASLIKFD 180 (343)
Q Consensus 109 dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~------~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
+|.+.-.+-.....+.-..+....+.+.+++|+|+.++... .|. .|.+++. +..............-.|+
T Consensus 328 ~G~l~~~~~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~--gg~~~~lt~g~~~t~PsWs 405 (591)
T PRK13616 328 DGSLVSVDGQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL--GGVAVQVLEGHSLTRPSWS 405 (591)
T ss_pred CCeEEEecCCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC--CCcceeeecCCCCCCceEC
Confidence 56655444332223322223334678899999998877665 243 4555554 2222333334457788999
Q ss_pred CCCCEEEEEeCC-c-EEEE-----------EcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEE---EECCCCc
Q 019326 181 GSGEKFFMVTEE-K-VGIH-----------QAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITA---WDTNSGK 243 (343)
Q Consensus 181 ~~~~~~~~~~~~-~-i~~~-----------d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i---~d~~~~~ 243 (343)
|+|..+++..++ . .++. ++..+.... .....|..+.|+ ++..++... +|.|++ -....|+
T Consensus 406 pDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~ 482 (591)
T PRK13616 406 LDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ 482 (591)
T ss_pred CCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc
Confidence 998877777333 2 2222 222222211 224579999999 455555443 477777 4444454
Q ss_pred -ee---EEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCC
Q 019326 244 -VA---YCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSST 319 (343)
Q Consensus 244 -~~---~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 319 (343)
.+ ..+...-...+.++.|..++. |+.+..++.-.+|.+.-...... .+.......++..++.+++
T Consensus 483 ~~l~~~~~l~~~l~~~~~~l~W~~~~~----------L~V~~~~~~~~v~~v~vDG~~~~-~~~~~n~~~~v~~vaa~~~ 551 (591)
T PRK13616 483 YALTNPREVGPGLGDTAVSLDWRTGDS----------LVVGRSDPEHPVWYVNLDGSNSD-ALPSRNLSAPVVAVAASPS 551 (591)
T ss_pred eeecccEEeecccCCccccceEecCCE----------EEEEecCCCCceEEEecCCcccc-ccCCCCccCceEEEecCCc
Confidence 11 112212334467888988874 44555556556666543321111 1122223456778888775
Q ss_pred C
Q 019326 320 K 320 (343)
Q Consensus 320 ~ 320 (343)
.
T Consensus 552 ~ 552 (591)
T PRK13616 552 T 552 (591)
T ss_pred e
Confidence 3
No 390
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.25 E-value=0.084 Score=46.44 Aligned_cols=150 Identities=12% Similarity=0.114 Sum_probs=89.6
Q ss_pred CCCeEEEEec-CceEEEee---CCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC
Q 019326 42 LSPITTVAVS-GTAAASGG---TDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA 117 (343)
Q Consensus 42 ~~~v~~l~~~-~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 117 (343)
-.+|..++|. |+.++-.. .+|.+++=|. +.+ +. -..|..+.|.|-+....+.+| +.-....|.||.+
T Consensus 19 iHPvhGlaWTDGkqVvLT~L~l~~gE~kfGds---~vi----Gq-FEhV~GlsW~P~~~~~~paLL-AVQHkkhVtVWqL 89 (671)
T PF15390_consen 19 IHPVHGLAWTDGKQVVLTDLQLHNGEPKFGDS---KVI----GQ-FEHVHGLSWAPPCTADTPALL-AVQHKKHVTVWQL 89 (671)
T ss_pred hccccceEecCCCEEEEEeeeeeCCccccCCc---cEe----ec-cceeeeeeecCcccCCCCceE-EEeccceEEEEEe
Confidence 4589999998 65544322 2233322211 122 22 356889999998643334444 4556678999998
Q ss_pred C-----Ccceeeeeee-ccc----cEEEEEEecCCCEEEEEeCCCeEEEEEccCCce--eEEEEcCCcceEEEEeCCCCE
Q 019326 118 D-----PFVLLTSVKV-HKK----GVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR--SFYHKIGKEASLIKFDGSGEK 185 (343)
Q Consensus 118 ~-----~~~~~~~~~~-~~~----~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 185 (343)
. ..+.+..-.. ... --..+.|+|....|++-.....-.+++++.... .......+.|.|.+|.+||++
T Consensus 90 ~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~R 169 (671)
T PF15390_consen 90 CPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQR 169 (671)
T ss_pred ccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCE
Confidence 4 2222211111 111 123567999888887776665555666654432 233455688999999999999
Q ss_pred EEEEeC--CcEEEEEcc
Q 019326 186 FFMVTE--EKVGIHQAE 200 (343)
Q Consensus 186 ~~~~~~--~~i~~~d~~ 200 (343)
++++-+ =.-++||-.
T Consensus 170 LVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 170 LVVAVGSSLHSYIWDSA 186 (671)
T ss_pred EEEEeCCeEEEEEecCc
Confidence 999933 345677754
No 391
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=97.24 E-value=0.1 Score=44.49 Aligned_cols=146 Identities=10% Similarity=0.026 Sum_probs=73.7
Q ss_pred CceEEEee------CCCeEEEEEcCCCeeeeEeccC--CCCCeEEEEEeCCCCCCCCceEEEeeC---------------
Q 019326 52 GTAAASGG------TDDTIHLYDLSTSSSLGAIHHH--ESSSVTSLAFYTPQNLSVPRNLFSTSA--------------- 108 (343)
Q Consensus 52 ~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~~~~~~l~s~~~--------------- 108 (343)
|+.++++- .-|-+.+.|-++.+........ ...--..+-|.|.. +.++|...
T Consensus 141 G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~-----nvMiSSeWg~P~~~~~Gf~~~d~ 215 (461)
T PF05694_consen 141 GRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRH-----NVMISSEWGAPSMFEKGFNPEDL 215 (461)
T ss_dssp --EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTT-----TEEEE-B---HHHHTT---TTTH
T ss_pred ccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCC-----CEEEEeccCChhhcccCCChhHh
Confidence 66777642 2345788888877766666542 12344567777776 56666543
Q ss_pred -----CCeEEEEECCCcceeeeeeeccc--cEEEEEEecC--CCE-EEEEeCCCeEEEEEc-cCCce----eEEEE----
Q 019326 109 -----DGFVSIFDADPFVLLTSVKVHKK--GVNDLAVHHS--GKL-ALTVGRDDCLAMVNL-VRGRR----SFYHK---- 169 (343)
Q Consensus 109 -----dg~i~iwd~~~~~~~~~~~~~~~--~v~~i~~~~~--~~~-l~~~~~d~~i~~wd~-~~~~~----~~~~~---- 169 (343)
..++.+||+.+.+.++++..-.. ....+.|..+ ..+ ++.+....+|..|-- ..++- +....
T Consensus 216 ~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v 295 (461)
T PF05694_consen 216 EAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKV 295 (461)
T ss_dssp HHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE-
T ss_pred hcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCccc
Confidence 36899999999999999875432 4556777554 333 333334445544433 33331 11111
Q ss_pred -------c-------CCcceEEEEeCCCCEEEEE--eCCcEEEEEcccc
Q 019326 170 -------I-------GKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDA 202 (343)
Q Consensus 170 -------~-------~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~ 202 (343)
. +.-++.+.+|.|.++|.++ ..|.++.||+...
T Consensus 296 ~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP 344 (461)
T PF05694_consen 296 EGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDP 344 (461)
T ss_dssp -SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SST
T ss_pred CcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCC
Confidence 0 2335778999999999888 8999999999864
No 392
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.23 E-value=0.06 Score=41.52 Aligned_cols=206 Identities=13% Similarity=0.117 Sum_probs=113.5
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeE-eccCCCCCeEEEEEeCCCCCCCCceEEE-eeCCCeEEEEECC--Ccceeeeee
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGA-IHHHESSSVTSLAFYTPQNLSVPRNLFS-TSADGFVSIFDAD--PFVLLTSVK 127 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~~~l~s-~~~dg~i~iwd~~--~~~~~~~~~ 127 (343)
+.++.+--..|.|.-||..+.+..+. +.+. +..++.+--.+. ++.+++ ++..-.|.-||.. .....+++.
T Consensus 27 ~sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p---~~ag~ilpv~~~---~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ 100 (310)
T KOG4499|consen 27 QSLLYVDIEAGEVHRYDIEQNKVYRAKIEGP---PSAGFILPVEGG---PQEFAVGCGSKFVIVNWDGVSESAKVYRTLF 100 (310)
T ss_pred ceEEEEEeccCceehhhhhhhheEEEEEecC---cceeEEEEecCC---CceEEEeecceEEEEEcccccceeeeeeecc
Confidence 55666666667788899887654332 3222 123333322221 233333 3333344456632 222222221
Q ss_pred e-----ccccEEEEEEecCCCEEEEEeCC---------CeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eC
Q 019326 128 V-----HKKGVNDLAVHHSGKLALTVGRD---------DCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TE 191 (343)
Q Consensus 128 ~-----~~~~v~~i~~~~~~~~l~~~~~d---------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 191 (343)
. .+...+.-..+|+|++++-.-.| |.++.|-.. ++.......-.-.+.++|+.+.+.+... .+
T Consensus 101 ev~~d~kknR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~-h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln 179 (310)
T KOG4499|consen 101 EVQPDRKKNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAG-HQVELIWNCVGISNGLAWDSDAKKFYYIDSLN 179 (310)
T ss_pred ccCchHHhcccccCccCCCCceeeeeeccccccccccccEEEEeccC-CCceeeehhccCCccccccccCcEEEEEccCc
Confidence 1 13355666678999884432222 334444321 1111112222334568899888888777 45
Q ss_pred CcEEEEE--cccce-----eEEEecCCcc-----eEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEE
Q 019326 192 EKVGIHQ--AEDAK-----LLCELDGKKR-----ILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKG 258 (343)
Q Consensus 192 ~~i~~~d--~~~~~-----~~~~~~~~~~-----i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~ 258 (343)
-.|.-|| ..++. .+..++...+ .-.++.. .+++.++.-..++|..+|..+|+.+.++. -....|++
T Consensus 180 ~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eik-lPt~qits 258 (310)
T KOG4499|consen 180 YEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIK-LPTPQITS 258 (310)
T ss_pred eEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEE-cCCCceEE
Confidence 5665676 55543 3333332111 1223333 56677788888999999999999999999 67889999
Q ss_pred EEEEecC
Q 019326 259 IVVLTKN 265 (343)
Q Consensus 259 ~~~~~~~ 265 (343)
++|-..+
T Consensus 259 ccFgGkn 265 (310)
T KOG4499|consen 259 CCFGGKN 265 (310)
T ss_pred EEecCCC
Confidence 9997664
No 393
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=97.15 E-value=0.043 Score=38.39 Aligned_cols=113 Identities=11% Similarity=0.071 Sum_probs=80.1
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEccCC--------ceeEEEEcCCcceEEEEeC-----CCCEEEEEeCCcEEEEEcccc
Q 019326 136 LAVHHSGKLALTVGRDDCLAMVNLVRG--------RRSFYHKIGKEASLIKFDG-----SGEKFFMVTEEKVGIHQAEDA 202 (343)
Q Consensus 136 i~~~~~~~~l~~~~~d~~i~~wd~~~~--------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~d~~~~ 202 (343)
-.|......|++++.-|.|.+++.... ..+........+.+++-.+ ....|+.++...+..||+.+.
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N 83 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENN 83 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccC
Confidence 345555668888889999999987633 3556777788888876644 456788889999999999988
Q ss_pred eeEEEecCCcceEEeeec---C-CCeEEEEeCCCcEEEEECCCCceeEEe
Q 019326 203 KLLCELDGKKRILCAAPG---E-NGVLFTGGEDRSITAWDTNSGKVAYCI 248 (343)
Q Consensus 203 ~~~~~~~~~~~i~~~~~~---~-~~~l~~~~~dg~i~i~d~~~~~~~~~~ 248 (343)
..+..-.-+..+.++.+. . ..-++..+.+..|.-||..-.+..++.
T Consensus 84 ~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtV 133 (136)
T PF14781_consen 84 SDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTV 133 (136)
T ss_pred chhhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEe
Confidence 777666666777777764 1 233444445677888887755555544
No 394
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.15 E-value=0.088 Score=41.93 Aligned_cols=206 Identities=14% Similarity=0.172 Sum_probs=120.0
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeCCCe-EEEEECCCcceeeeeeecccc--EEEEEEecCCCEEEEEeCC-----CeEE
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSADGF-VSIFDADPFVLLTSVKVHKKG--VNDLAVHHSGKLALTVGRD-----DCLA 155 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~--v~~i~~~~~~~~l~~~~~d-----~~i~ 155 (343)
..-..++|+|.. +.-++.+-.-|+ ..++|..+.+...++...++. --.=.|+|+|.+|...-.| |.|-
T Consensus 68 aR~Hgi~~~p~~----~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViG 143 (366)
T COG3490 68 ARGHGIAFHPAL----PRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIG 143 (366)
T ss_pred cccCCeecCCCC----cceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEE
Confidence 344568888877 356666666665 567898887766665433321 1223689999998876543 7799
Q ss_pred EEEccCCce-eEEE-EcCCcceEEEEeCCCCEEEEEeCC-------------------cEEEEEcccceeEEEec-----
Q 019326 156 MVNLVRGRR-SFYH-KIGKEASLIKFDGSGEKFFMVTEE-------------------KVGIHQAEDAKLLCELD----- 209 (343)
Q Consensus 156 ~wd~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------------------~i~~~d~~~~~~~~~~~----- 209 (343)
+||.+.+-. +-.+ .+.-....+.+.+||+.++.+..| .+.+.|..++.++.+..
T Consensus 144 vYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l 223 (366)
T COG3490 144 VYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASL 223 (366)
T ss_pred EEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhh
Confidence 999885421 2222 233456778999999999988432 24555666666665544
Q ss_pred CCcceEEeeecCCCeEEEEeC-CCc-----EEEEECCCCceeEEecc------cccccEEEEEEEecCCCCCCCCCCeEE
Q 019326 210 GKKRILCAAPGENGVLFTGGE-DRS-----ITAWDTNSGKVAYCIED------AHSARVKGIVVLTKNDGGSTAENPYLV 277 (343)
Q Consensus 210 ~~~~i~~~~~~~~~~l~~~~~-dg~-----i~i~d~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~~~~~~~~l 277 (343)
+.-.+..++..+++.++.|+. .|- -.+=-...++++.-+.. .....|-+++.+.... ++
T Consensus 224 ~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~g---------lV 294 (366)
T COG3490 224 RQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDG---------LV 294 (366)
T ss_pred hhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCC---------eE
Confidence 234566666654444444432 111 11111123444443331 2335677888776554 45
Q ss_pred EEEc-CCCcEEEEeccCccccCCCcc
Q 019326 278 ASAS-SDGVICVWDVRMAIKEKPLPL 302 (343)
Q Consensus 278 ~s~~-~dg~i~vwd~~~~~~~~~~~~ 302 (343)
+..+ .-+...+||..++......++
T Consensus 295 ~lTSP~GN~~vi~da~tG~vv~~a~l 320 (366)
T COG3490 295 ALTSPRGNRAVIWDAATGAVVSEAAL 320 (366)
T ss_pred EEecCCCCeEEEEEcCCCcEEecccc
Confidence 4444 445678899999864443333
No 395
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.10 E-value=0.17 Score=44.27 Aligned_cols=190 Identities=13% Similarity=0.115 Sum_probs=106.5
Q ss_pred eEEEEEeCCCCCCCCceEE-EeeCCC----eEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCC--------
Q 019326 86 VTSLAFYTPQNLSVPRNLF-STSADG----FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD-------- 152 (343)
Q Consensus 86 v~~l~~~~~~~~~~~~~l~-s~~~dg----~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~-------- 152 (343)
+....++|++ ++++ +.+..| .++++|+++++.+...-.. ..-..+.|.++++.|+....+.
T Consensus 126 ~~~~~~Spdg-----~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~-~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~ 199 (414)
T PF02897_consen 126 LGGFSVSPDG-----KRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN-PKFSSVSWSDDGKGFFYTRFDEDQRTSDSG 199 (414)
T ss_dssp EEEEEETTTS-----SEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE-EESEEEEECTTSSEEEEEECSTTTSS-CCG
T ss_pred eeeeeECCCC-----CEEEEEecCCCCceEEEEEEECCCCcCcCCcccc-cccceEEEeCCCCEEEEEEeCcccccccCC
Confidence 3357889998 5555 434545 5999999998766533111 1223499999988776665433
Q ss_pred ---eEEEEEccCCcee--EEEEcC--Cc-ceEEEEeCCCCEEEEE--e--C-CcEEEEEcccc-----eeEEEecCCcce
Q 019326 153 ---CLAMVNLVRGRRS--FYHKIG--KE-ASLIKFDGSGEKFFMV--T--E-EKVGIHQAEDA-----KLLCELDGKKRI 214 (343)
Q Consensus 153 ---~i~~wd~~~~~~~--~~~~~~--~~-~~~~~~~~~~~~~~~~--~--~-~~i~~~d~~~~-----~~~~~~~~~~~i 214 (343)
.|+.|.+.+.... ..+... .. ...+..++++++++.. . + ..+.+.++... ...........+
T Consensus 200 ~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~ 279 (414)
T PF02897_consen 200 YPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGV 279 (414)
T ss_dssp CCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-
T ss_pred CCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCce
Confidence 3778887766432 233222 22 4568889999998876 2 3 45777787764 233333333333
Q ss_pred E-EeeecCCCeEEEEe---CCCcEEEEECCCCce---eEEecccccc--cEEEEEEEecCCCCCCCCCCeEEEEEcCCC-
Q 019326 215 L-CAAPGENGVLFTGG---EDRSITAWDTNSGKV---AYCIEDAHSA--RVKGIVVLTKNDGGSTAENPYLVASASSDG- 284 (343)
Q Consensus 215 ~-~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~---~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg- 284 (343)
. .+....+.+++... ..+.|...++.+... ...+. .|.. .+..+....+. +++....++
T Consensus 280 ~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~-~~~~~~~l~~~~~~~~~----------Lvl~~~~~~~ 348 (414)
T PF02897_consen 280 EYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLI-PEDEDVSLEDVSLFKDY----------LVLSYRENGS 348 (414)
T ss_dssp EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE---SSSEEEEEEEEETTE----------EEEEEEETTE
T ss_pred EEEEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEc-CCCCceeEEEEEEECCE----------EEEEEEECCc
Confidence 3 33333333333332 246677778877652 22343 4555 45566554332 555555555
Q ss_pred -cEEEEecc
Q 019326 285 -VICVWDVR 292 (343)
Q Consensus 285 -~i~vwd~~ 292 (343)
.|+++++.
T Consensus 349 ~~l~v~~~~ 357 (414)
T PF02897_consen 349 SRLRVYDLD 357 (414)
T ss_dssp EEEEEEETT
T ss_pred cEEEEEECC
Confidence 57888988
No 396
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.09 E-value=0.15 Score=43.50 Aligned_cols=239 Identities=15% Similarity=0.115 Sum_probs=123.3
Q ss_pred cCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCC---
Q 019326 8 YEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHE--- 82 (343)
Q Consensus 8 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--- 82 (343)
..+.+.+||+++. +..++.. ....+....|+ |+.++... ++.|.+++..+++..+......
T Consensus 21 ~~~~y~i~d~~~~----------~~~~l~~---~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i 86 (353)
T PF00930_consen 21 FKGDYYIYDIETG----------EITPLTP---PPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGI 86 (353)
T ss_dssp EEEEEEEEETTTT----------EEEESS----EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTE
T ss_pred cceeEEEEecCCC----------ceEECcC---CccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeE
Confidence 3456788888761 1222222 14567778888 77777665 5789999987775443221110
Q ss_pred -------------CCCeEEEEEeCCCCCCCCceEEEeeCC-CeE-----------------------------------E
Q 019326 83 -------------SSSVTSLAFYTPQNLSVPRNLFSTSAD-GFV-----------------------------------S 113 (343)
Q Consensus 83 -------------~~~v~~l~~~~~~~~~~~~~l~s~~~d-g~i-----------------------------------~ 113 (343)
-+.-..+.|+|++ ++|+....| ..| .
T Consensus 87 ~nG~~dwvyeEEv~~~~~~~~WSpd~-----~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~ 161 (353)
T PF00930_consen 87 YNGVPDWVYEEEVFDRRSAVWWSPDS-----KYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLF 161 (353)
T ss_dssp EESB--HHHHHHTSSSSBSEEE-TTS-----SEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEE
T ss_pred EcCccceeccccccccccceEECCCC-----CEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEE
Confidence 1233568899998 555544332 222 2
Q ss_pred EEECCCcceeee--e---eeccccEEEEEEecCCCEEEEEe--CC---CeEEEEEccCCceeEEEE--cCCcc---eEEE
Q 019326 114 IFDADPFVLLTS--V---KVHKKGVNDLAVHHSGKLALTVG--RD---DCLAMVNLVRGRRSFYHK--IGKEA---SLIK 178 (343)
Q Consensus 114 iwd~~~~~~~~~--~---~~~~~~v~~i~~~~~~~~l~~~~--~d---~~i~~wd~~~~~~~~~~~--~~~~~---~~~~ 178 (343)
++|+.+++.... . ......+..+.|.+++..|+..- .+ -.+.++|..++....... ....+ ....
T Consensus 162 v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~ 241 (353)
T PF00930_consen 162 VVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPH 241 (353)
T ss_dssp EEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEE
T ss_pred EEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccc
Confidence 334433332110 0 01223577888988887343332 22 236677887765433322 22222 3455
Q ss_pred Ee-CCCCEEEEE--eCCc--EEEEEcccceeEEEecCCcceEE-eeec-C-CCeEEEEeCC----CcEEEEECCCCceeE
Q 019326 179 FD-GSGEKFFMV--TEEK--VGIHQAEDAKLLCELDGKKRILC-AAPG-E-NGVLFTGGED----RSITAWDTNSGKVAY 246 (343)
Q Consensus 179 ~~-~~~~~~~~~--~~~~--i~~~d~~~~~~~~~~~~~~~i~~-~~~~-~-~~~l~~~~~d----g~i~i~d~~~~~~~~ 246 (343)
+. +++..++.. .+|. |.+++...+.....-.+.-.|.. +.++ . +.+.+++..+ ..|+.-++..+..+.
T Consensus 242 ~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~ 321 (353)
T PF00930_consen 242 FLGPDGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPK 321 (353)
T ss_dssp E-TTTSSEEEEEEETTSSEEEEEEETTSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEE
T ss_pred cccCCCCEEEEEEEcCCCcEEEEEcccccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeE
Confidence 54 666655555 4454 55566666664433235566655 3344 2 3355566653 356666666344566
Q ss_pred EecccccccEEEEEEEecCC
Q 019326 247 CIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 247 ~~~~~h~~~v~~~~~~~~~~ 266 (343)
.+. .....-..+.|+|++.
T Consensus 322 ~LT-~~~~~~~~~~~Spdg~ 340 (353)
T PF00930_consen 322 CLT-CEDGDHYSASFSPDGK 340 (353)
T ss_dssp ESS-TTSSTTEEEEE-TTSS
T ss_pred ecc-CCCCCceEEEECCCCC
Confidence 666 2222225888998876
No 397
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.06 E-value=0.055 Score=40.96 Aligned_cols=170 Identities=12% Similarity=0.033 Sum_probs=105.8
Q ss_pred ceEEEeeCC--CeEEEEECCCcceeeeeeeccccEEEEEEecCCCEE-EEEeCCCeEEEEEccCCceeEEEEcCCcceEE
Q 019326 101 RNLFSTSAD--GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLA-LTVGRDDCLAMVNLVRGRRSFYHKIGKEASLI 177 (343)
Q Consensus 101 ~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 177 (343)
.++.+.+.- ..|++||+.+++.+.+-......+..=-...-+..+ ...-.+|.-..+|.++-+.+..+..++.-..+
T Consensus 57 ~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~GeGWgL 136 (262)
T COG3823 57 HILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGEGWGL 136 (262)
T ss_pred EEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCcceee
Confidence 466666654 479999999988776654321111111111112222 23345788889999988888777777766666
Q ss_pred EEeCCCCEEEEE-eCCcEEEEEcccceeEEEec---CC---cceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEec-
Q 019326 178 KFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD---GK---KRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE- 249 (343)
Q Consensus 178 ~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~---~~---~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~- 249 (343)
+. ++..++.+ ....++.-|..+.....++. .. ..++.+.|-++.+.+-.-.+..|...|..+|+.+..+.
T Consensus 137 t~--d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~VdG~lyANVw~t~~I~rI~p~sGrV~~widl 214 (262)
T COG3823 137 TS--DDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWVDGELYANVWQTTRIARIDPDSGRVVAWIDL 214 (262)
T ss_pred ec--CCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeeeccEEEEeeeeecceEEEcCCCCcEEEEEEc
Confidence 54 45556666 66677777887766555544 22 33455666666666666666677777888887766544
Q ss_pred ----------ccccccEEEEEEEecCCCCCCCCCCeEEEEE
Q 019326 250 ----------DAHSARVKGIVVLTKNDGGSTAENPYLVASA 280 (343)
Q Consensus 250 ----------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 280 (343)
..|....+++++.+..+ ++++||
T Consensus 215 S~L~~~~~~~~~~~nvlNGIA~~~~~~--------r~~iTG 247 (262)
T COG3823 215 SGLLKELNLDKSNDNVLNGIAHDPQQD--------RFLITG 247 (262)
T ss_pred cCCchhcCccccccccccceeecCcCC--------eEEEec
Confidence 23445678888887764 266666
No 398
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=97.06 E-value=0.16 Score=43.33 Aligned_cols=186 Identities=10% Similarity=0.052 Sum_probs=93.6
Q ss_pred ceEEEee-CCCeEEEEECCC----cceeeeeee---cc----ccEEEEEEecCCCEEEEEeC------CCeEEEEEccCC
Q 019326 101 RNLFSTS-ADGFVSIFDADP----FVLLTSVKV---HK----KGVNDLAVHHSGKLALTVGR------DDCLAMVNLVRG 162 (343)
Q Consensus 101 ~~l~s~~-~dg~i~iwd~~~----~~~~~~~~~---~~----~~v~~i~~~~~~~~l~~~~~------d~~i~~wd~~~~ 162 (343)
++|+..+ ..+.|+|.|+.+ .+..+.++. +. .....+...|+|+.++++-. -|.+.+.|-++.
T Consensus 88 r~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf 167 (461)
T PF05694_consen 88 RYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGETF 167 (461)
T ss_dssp -EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT-
T ss_pred CcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCccc
Confidence 4566555 678999999863 344444442 11 23345666788888877533 256888888877
Q ss_pred ceeEEEEcCCc----ceEEEEeCCCCEEEEEe---------------------CCcEEEEEcccceeEEEecCC---cce
Q 019326 163 RRSFYHKIGKE----ASLIKFDGSGEKFFMVT---------------------EEKVGIHQAEDAKLLCELDGK---KRI 214 (343)
Q Consensus 163 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---------------------~~~i~~~d~~~~~~~~~~~~~---~~i 214 (343)
+.......... ...+-+.|..+.++++. ...+.+||+.+.+.++++... ...
T Consensus 168 ~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~p 247 (461)
T PF05694_consen 168 EVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMP 247 (461)
T ss_dssp -EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEE
T ss_pred cccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCce
Confidence 76666555322 34477788888888773 346999999999999999833 335
Q ss_pred EEeeec--CC-C-eEEEEeCCCcEEEEEC-CCCc----eeEEeccc----------------ccccEEEEEEEecCCCCC
Q 019326 215 LCAAPG--EN-G-VLFTGGEDRSITAWDT-NSGK----VAYCIEDA----------------HSARVKGIVVLTKNDGGS 269 (343)
Q Consensus 215 ~~~~~~--~~-~-~l~~~~~dg~i~i~d~-~~~~----~~~~~~~~----------------h~~~v~~~~~~~~~~~~~ 269 (343)
..+.|. +. . -++.+....+|..|-- ..++ .+.++... -..-|+.|.++.+.+
T Consensus 248 LEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDr--- 324 (461)
T PF05694_consen 248 LEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDR--- 324 (461)
T ss_dssp EEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS----
T ss_pred EEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCC---
Confidence 566665 22 2 2333334555555533 3332 23333200 024578888888876
Q ss_pred CCCCCeEEE-EEcCCCcEEEEeccCcc
Q 019326 270 TAENPYLVA-SASSDGVICVWDVRMAI 295 (343)
Q Consensus 270 ~~~~~~~l~-s~~~dg~i~vwd~~~~~ 295 (343)
+|. +.=.+|.|+.||+..+.
T Consensus 325 ------fLYvs~W~~GdvrqYDISDP~ 345 (461)
T PF05694_consen 325 ------FLYVSNWLHGDVRQYDISDPF 345 (461)
T ss_dssp ------EEEEEETTTTEEEEEE-SSTT
T ss_pred ------EEEEEcccCCcEEEEecCCCC
Confidence 555 45568999999999864
No 399
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=97.05 E-value=0.28 Score=46.04 Aligned_cols=152 Identities=9% Similarity=0.091 Sum_probs=93.1
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeE-------------EEEEeCCCCCCCCceEEEeeC----------
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVT-------------SLAFYTPQNLSVPRNLFSTSA---------- 108 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~-------------~l~~~~~~~~~~~~~l~s~~~---------- 108 (343)
+..++.++.|+.+.-.|.++|+....+... +.|. .+.-.|- .....++.|+.
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~--G~vdl~~~~g~~~~g~~~~ts~P~---V~~g~VIvG~~v~d~~~~~~~ 334 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTGKLCEDFGNN--GTVDLTAGMGTTPPGYYYPTSPPL---VAGTTVVIGGRVADNYSTDEP 334 (764)
T ss_pred CCEEEEecCCCeEEEEECCCCCEEEEecCC--CceeeecccCcCCCcccccccCCE---EECCEEEEEecccccccccCC
Confidence 458888999999999999999998877432 2221 0000110 00135666643
Q ss_pred CCeEEEEECCCcceeeeeeec---------cc--------cE-EEEEEecCCCEEEEEe------------------CCC
Q 019326 109 DGFVSIFDADPFVLLTSVKVH---------KK--------GV-NDLAVHHSGKLALTVG------------------RDD 152 (343)
Q Consensus 109 dg~i~iwd~~~~~~~~~~~~~---------~~--------~v-~~i~~~~~~~~l~~~~------------------~d~ 152 (343)
+|.|+-+|.++++.+..+..- .+ .+ ..+++++....++... ..+
T Consensus 335 ~G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~ 414 (764)
T TIGR03074 335 SGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSS 414 (764)
T ss_pred CcEEEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccc
Confidence 688999999999988877521 00 11 2234444433333321 235
Q ss_pred eEEEEEccCCceeEEEEc-CC---------cceEEEEeC-CCC---EEEEE-eCCcEEEEEcccceeEEEe
Q 019326 153 CLAMVNLVRGRRSFYHKI-GK---------EASLIKFDG-SGE---KFFMV-TEEKVGIHQAEDAKLLCEL 208 (343)
Q Consensus 153 ~i~~wd~~~~~~~~~~~~-~~---------~~~~~~~~~-~~~---~~~~~-~~~~i~~~d~~~~~~~~~~ 208 (343)
.|.-.|.++|+....+.. ++ +...+.+.. +++ .++.+ .+|.+.++|.++++.+...
T Consensus 415 slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 415 SLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred eEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence 677888889987765544 22 233334433 553 55555 8999999999999877654
No 400
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.05 E-value=0.093 Score=40.55 Aligned_cols=130 Identities=15% Similarity=0.084 Sum_probs=80.8
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeCC----------CeEEEEECCCcceeeeeeeccccEEEEEEecCCCEE-EEEeCCC
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSAD----------GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLA-LTVGRDD 152 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~~~~~d~ 152 (343)
...+.-..+|++ ++ +.|... |.++.|-... .+..+...-..-+.++|+.+.+.+ ++-+.+-
T Consensus 109 nR~NDgkvdP~G-----ry-y~GtMad~~~~le~~~g~Ly~~~~~h--~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~ 180 (310)
T KOG4499|consen 109 NRLNDGKVDPDG-----RY-YGGTMADFGDDLEPIGGELYSWLAGH--QVELIWNCVGISNGLAWDSDAKKFYYIDSLNY 180 (310)
T ss_pred cccccCccCCCC-----ce-eeeeeccccccccccccEEEEeccCC--CceeeehhccCCccccccccCcEEEEEccCce
Confidence 445556677888 55 444432 3344443321 122222222334668888776544 4556677
Q ss_pred eEEEEE--ccCCcee-----EEEEc-----CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEee
Q 019326 153 CLAMVN--LVRGRRS-----FYHKI-----GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAA 218 (343)
Q Consensus 153 ~i~~wd--~~~~~~~-----~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~ 218 (343)
.|..|| ..+|... ..... ....-.+++..+|++.+++ ..+++...|..+++.+.++. ....++|++
T Consensus 181 ~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitscc 260 (310)
T KOG4499|consen 181 EVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCC 260 (310)
T ss_pred EEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEE
Confidence 787787 5555422 11111 1223446777889988888 99999999999999999998 557799999
Q ss_pred ecC
Q 019326 219 PGE 221 (343)
Q Consensus 219 ~~~ 221 (343)
|..
T Consensus 261 FgG 263 (310)
T KOG4499|consen 261 FGG 263 (310)
T ss_pred ecC
Confidence 963
No 401
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.93 E-value=0.0039 Score=35.02 Aligned_cols=34 Identities=15% Similarity=0.232 Sum_probs=29.8
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcce
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL 122 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 122 (343)
...|.+++|+|.. .+|+.++.+|.|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P~m-----dLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTM-----DLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCC-----CEEEEEECCCeEEEEEC-CCcC
Confidence 4679999999999 79999999999999998 4443
No 402
>PHA03098 kelch-like protein; Provisional
Probab=96.89 E-value=0.13 Score=46.62 Aligned_cols=183 Identities=10% Similarity=0.058 Sum_probs=88.5
Q ss_pred ecCceEEEeeCCC------eEEEEEcCCCeeeeE--eccCCCCCeEEEEEeCCCCCCCCceEEEeeCC-----CeEEEEE
Q 019326 50 VSGTAAASGGTDD------TIHLYDLSTSSSLGA--IHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD-----GFVSIFD 116 (343)
Q Consensus 50 ~~~~~l~s~~~dg------~i~iwd~~~~~~~~~--~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d-----g~i~iwd 116 (343)
..+..++.||.++ .+..||..+.+.... +... .... +++.. ++ ..++.|+.+ ..+..||
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~-R~~~-~~~~~-~~-----~lyv~GG~~~~~~~~~v~~yd 364 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYP-RKNP-GVTVF-NN-----RIYVIGGIYNSISLNTVESWK 364 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcc-cccc-eEEEE-CC-----EEEEEeCCCCCEecceEEEEc
Confidence 3366667776543 477888877654321 1111 1222 22222 34 577777765 3577788
Q ss_pred CCCcc--eeeeeeeccccEEEEEEecCCCEEEEEeCC------CeEEEEEccCCceeEEEEcCCc--ceEEEEeCCCCEE
Q 019326 117 ADPFV--LLTSVKVHKKGVNDLAVHHSGKLALTVGRD------DCLAMVNLVRGRRSFYHKIGKE--ASLIKFDGSGEKF 186 (343)
Q Consensus 117 ~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 186 (343)
..+.+ ....+....... +++ .-+++..+.||.+ +.+..||..+++-......+.+ ..++ ...++..+
T Consensus 365 ~~~~~W~~~~~lp~~r~~~-~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~-~~~~~~iy 441 (534)
T PHA03098 365 PGESKWREEPPLIFPRYNP-CVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCA-IYHDGKIY 441 (534)
T ss_pred CCCCceeeCCCcCcCCccc-eEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceE-EEECCEEE
Confidence 76543 222221111111 112 2356667777632 4578899887654332222211 1122 22344555
Q ss_pred EEE-eC--------CcEEEEEcccceeEEEe--cCCcceEEeeecCCCeEEEEeCC-----CcEEEEECCCCc
Q 019326 187 FMV-TE--------EKVGIHQAEDAKLLCEL--DGKKRILCAAPGENGVLFTGGED-----RSITAWDTNSGK 243 (343)
Q Consensus 187 ~~~-~~--------~~i~~~d~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 243 (343)
+.+ .. ..+.+||..+.+-...- ..+..-.+++..++.+++.|+.+ ..+.+||..+.+
T Consensus 442 v~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 442 VIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTNT 514 (534)
T ss_pred EECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEECCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence 554 21 13778888776533221 11111112222256666667654 467888877553
No 403
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=96.86 E-value=0.41 Score=44.91 Aligned_cols=174 Identities=11% Similarity=0.105 Sum_probs=111.8
Q ss_pred eEEEEECCCcceeeeeeecc----ccEEEEEEecC-CCEEEEEeC----------CCeEEEEEccCCcee-EEEEcCCcc
Q 019326 111 FVSIFDADPFVLLTSVKVHK----KGVNDLAVHHS-GKLALTVGR----------DDCLAMVNLVRGRRS-FYHKIGKEA 174 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~~~----~~v~~i~~~~~-~~~l~~~~~----------d~~i~~wd~~~~~~~-~~~~~~~~~ 174 (343)
.++++|-.+.+.+...+... -.+.+..|..| +.++++|.. .|.|.++.....+.+ ......-..
T Consensus 751 ~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~G 830 (1096)
T KOG1897|consen 751 FLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKG 830 (1096)
T ss_pred EEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeecc
Confidence 36677776665544333111 14555568777 567777653 577888887773322 222222222
Q ss_pred eEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECC--CCceeEEecc
Q 019326 175 SLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTN--SGKVAYCIED 250 (343)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~ 250 (343)
...++..-+..++++-+..+++|++.+.+.++.-. +..++..+... .++.+++|..-+.+.+...+ .|.....-++
T Consensus 831 av~aL~~fngkllA~In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD 910 (1096)
T KOG1897|consen 831 AVYALVEFNGKLLAGINQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVARD 910 (1096)
T ss_pred ceeehhhhCCeEEEecCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEeehh
Confidence 23333344556667788899999999886555433 66777777766 67899999988887775554 4445555555
Q ss_pred cccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 251 AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 251 ~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.+....+++.+..+. .++-+-.+|.+.+-..++.
T Consensus 911 ~~p~Wmtaveil~~d----------~ylgae~~gNlf~v~~d~~ 944 (1096)
T KOG1897|consen 911 YNPNWMTAVEILDDD----------TYLGAENSGNLFTVRKDSD 944 (1096)
T ss_pred hCccceeeEEEecCc----------eEEeecccccEEEEEecCC
Confidence 688899999888776 5666777888888776654
No 404
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.85 E-value=0.2 Score=41.22 Aligned_cols=227 Identities=12% Similarity=0.120 Sum_probs=114.7
Q ss_pred CeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEecc--CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc
Q 019326 44 PITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHH--HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV 121 (343)
Q Consensus 44 ~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 121 (343)
...++.|.++....++..+. .+...+.|+.-..+.. .-......+....+. ....++..|.|+.= .+.++
T Consensus 63 ~l~~I~f~~~~g~ivG~~g~-ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~------~~~l~~~~G~iy~T-~DgG~ 134 (302)
T PF14870_consen 63 HLNSISFDGNEGWIVGEPGL-LLHTTDGGKTWERVPLSSKLPGSPFGITALGDG------SAELAGDRGAIYRT-TDGGK 134 (302)
T ss_dssp EEEEEEEETTEEEEEEETTE-EEEESSTTSS-EE----TT-SS-EEEEEEEETT------EEEEEETT--EEEE-SSTTS
T ss_pred eEEEEEecCCceEEEcCCce-EEEecCCCCCcEEeecCCCCCCCeeEEEEcCCC------cEEEEcCCCcEEEe-CCCCC
Confidence 36677887444444555563 3444454543333321 102334444444443 33334455554322 22232
Q ss_pred ee-eeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc-eeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEE-
Q 019326 122 LL-TSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR-RSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQ- 198 (343)
Q Consensus 122 ~~-~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d- 198 (343)
.= .....-.+.+..+.-+++|++++++.......-||.-... ..........+..+.|.|++...+++..+.++.=+
T Consensus 135 tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~ 214 (302)
T PF14870_consen 135 TWQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDD 214 (302)
T ss_dssp SEEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-
T ss_pred CeeEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEeCCcEEEEccC
Confidence 21 1223344678888899999988888777667788754332 33344456889999999999988888888888877
Q ss_pred cccceeEEE--ec---CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEeccc--ccccEEEEEEEecCCCCCCC
Q 019326 199 AEDAKLLCE--LD---GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDA--HSARVKGIVVLTKNDGGSTA 271 (343)
Q Consensus 199 ~~~~~~~~~--~~---~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~ 271 (343)
......... .+ ....+..+++.+.+.+.+++..|.+ +.....|+.-...+.. -..-+..+.|.+..
T Consensus 215 ~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~------ 287 (302)
T PF14870_consen 215 PDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPD------ 287 (302)
T ss_dssp TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETT------
T ss_pred CCCccccccccCCcccCceeeEEEEecCCCCEEEEeCCccE-EEeCCCCccceECccccCCCCceEEEEEcCCC------
Confidence 233333322 11 2334788899876666666667755 4566667665555422 23457888888765
Q ss_pred CCCeEEEEEcCCCcEEEE
Q 019326 272 ENPYLVASASSDGVICVW 289 (343)
Q Consensus 272 ~~~~~l~s~~~dg~i~vw 289 (343)
.-...+.+|.|.-|
T Consensus 288 ----~gf~lG~~G~ll~~ 301 (302)
T PF14870_consen 288 ----KGFVLGQDGVLLRY 301 (302)
T ss_dssp ----EEEEE-STTEEEEE
T ss_pred ----ceEEECCCcEEEEe
Confidence 46666678877655
No 405
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=96.80 E-value=0.095 Score=36.74 Aligned_cols=106 Identities=11% Similarity=0.113 Sum_probs=72.7
Q ss_pred ceEEEeeCCCeEEEEECCCc--------ceeeeeeeccccEEEEEEec-----CCCEEEEEeCCCeEEEEEccCCceeEE
Q 019326 101 RNLFSTSADGFVSIFDADPF--------VLLTSVKVHKKGVNDLAVHH-----SGKLALTVGRDDCLAMVNLVRGRRSFY 167 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~v~~i~~~~-----~~~~l~~~~~d~~i~~wd~~~~~~~~~ 167 (343)
..|+.++.-|.|.|++.... ..+..+. -...|++++-.+ +...|+.|+ ...+..||+..+..++.
T Consensus 11 pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~N~d~Fy 88 (136)
T PF14781_consen 11 PCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVENNSDLFY 88 (136)
T ss_pred eeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcccCchhhh
Confidence 57888888999999987532 2334443 456777776544 234566655 46799999999998888
Q ss_pred EEcCCcceEEEEeC----CCCEEEEEeCCcEEEEEcccceeEEEe
Q 019326 168 HKIGKEASLIKFDG----SGEKFFMVTEEKVGIHQAEDAKLLCEL 208 (343)
Q Consensus 168 ~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~d~~~~~~~~~~ 208 (343)
...+..+.++.+-. ..+.++++.+..|.-||....+...+.
T Consensus 89 ke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtV 133 (136)
T PF14781_consen 89 KEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTV 133 (136)
T ss_pred hhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEe
Confidence 88888888877733 344555557777777776665555443
No 406
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=96.78 E-value=0.38 Score=43.30 Aligned_cols=249 Identities=11% Similarity=0.116 Sum_probs=124.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-Cc--eEEEeeCCC--eEEEEEcCCCeeee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GT--AAASGGTDD--TIHLYDLSTSSSLG 76 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~--~l~s~~~dg--~i~iwd~~~~~~~~ 76 (343)
+++.+..+|.++...+... +.......+..+ ....+++++- .. +|+.|+.-| .+..|....-+.+.
T Consensus 224 ~~lL~~e~G~l~~l~l~~~------~~~i~i~~~g~~---~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~ 294 (504)
T PF10433_consen 224 RILLQDEDGDLYLLTLDND------GGSISITYLGTL---CSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLD 294 (504)
T ss_dssp EEEEEETTSEEEEEEEEEE------EEEEEEEEEEE-----S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEE
T ss_pred EEEEEeCCCeEEEEEEEEC------CCeEEEEEcCCc---CChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEE
Confidence 5778889999988888761 111223333221 4455666666 55 888887744 45555545556666
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCC-----ceEEEee---CCCeEEEEECCCcce--eeeeeec--cccEEEEEEec-CCC
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVP-----RNLFSTS---ADGFVSIFDADPFVL--LTSVKVH--KKGVNDLAVHH-SGK 143 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~-----~~l~s~~---~dg~i~iwd~~~~~~--~~~~~~~--~~~v~~i~~~~-~~~ 143 (343)
.+..- ++|..+++.+......+ ..|++++ .+|.+++..-.-+-. ....... -..++.+.... +..
T Consensus 295 ~~~N~--~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~~~ 372 (504)
T PF10433_consen 295 SLPNW--GPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPGVTGIWTLKLSSSDHS 372 (504)
T ss_dssp EE------SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSSBS
T ss_pred eccCc--CCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCCceEEEEeeecCCCce
Confidence 77665 89999999754221111 0455554 477888875421111 1111111 22444454433 245
Q ss_pred EEEEEeCCCeEEEEEcc---CCceeEEE---EcCCcceEEEEeC-CCCEEEEEeCCcEEEEEcccceeEEEec--CCcce
Q 019326 144 LALTVGRDDCLAMVNLV---RGRRSFYH---KIGKEASLIKFDG-SGEKFFMVTEEKVGIHQAEDAKLLCELD--GKKRI 214 (343)
Q Consensus 144 ~l~~~~~d~~i~~wd~~---~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~i 214 (343)
+|+....+ .-+++.+. ....+... .+......+.... .+..++=.....|++.+....+...... ....|
T Consensus 373 ~lv~S~~~-~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~~~~ivQVt~~~i~l~~~~~~~~~~~w~~~~~~~I 451 (504)
T PF10433_consen 373 YLVLSFPN-ETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVGDGRIVQVTPKGIRLIDLEDGKLTQEWKPPAGSII 451 (504)
T ss_dssp EEEEEESS-EEEEEEES----SSEEEEE---TS-SSS-EEEEEEETTTEEEEEESSEEEEEESSSTSEEEEEE-TTS---
T ss_pred EEEEEcCC-ceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcCCCeEEEEecCeEEEEECCCCeEEEEEeCCCCCeE
Confidence 66665554 44455553 23322111 1111111121111 2555555577889999888777766553 45556
Q ss_pred EEeeecCCCeEEEEeCCCcEEEEECCCCceeEEec-c---cccccEEEEEEEe
Q 019326 215 LCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE-D---AHSARVKGIVVLT 263 (343)
Q Consensus 215 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~---~h~~~v~~~~~~~ 263 (343)
.+.+. .+.+++.+..++.+..+.+.......... . .....|.++...|
T Consensus 452 ~~a~~-~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p 503 (504)
T PF10433_consen 452 VAASI-NDPQVLVALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP 503 (504)
T ss_dssp SEEEE-SSSEEEEEE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred EEEEE-CCCEEEEEEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence 66666 55667777778889999887665543322 1 1456788877665
No 407
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=96.75 E-value=0.32 Score=42.02 Aligned_cols=140 Identities=8% Similarity=0.051 Sum_probs=92.5
Q ss_pred CCEEEEEeCCCeEEEEEccCCc-----eeEEEEcCCcceEEEEeC-----CCCEEEEEeCCcEEEEEcccce--------
Q 019326 142 GKLALTVGRDDCLAMVNLVRGR-----RSFYHKIGKEASLIKFDG-----SGEKFFMVTEEKVGIHQAEDAK-------- 203 (343)
Q Consensus 142 ~~~l~~~~~d~~i~~wd~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~d~~~~~-------- 203 (343)
...+++|+..|.+++|+..... .+.......+|..+.... ....+++-.-..+.+|.+....
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~~ 116 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGNQ 116 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCcE
Confidence 3689999999999999986543 445566677877776543 3345566699999999884221
Q ss_pred --eEEEecCC--cceEEee---ec--C-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCC
Q 019326 204 --LLCELDGK--KRILCAA---PG--E-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAEN 273 (343)
Q Consensus 204 --~~~~~~~~--~~i~~~~---~~--~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 273 (343)
....+.|. .....++ |. . ..++.+-+.||.+.+|+-+.-.....++ ...-...+.+.+..+
T Consensus 117 ~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp--~~llPgPl~Y~~~tD------- 187 (418)
T PF14727_consen 117 YQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLP--DFLLPGPLCYCPRTD------- 187 (418)
T ss_pred EEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcC--CCCCCcCeEEeecCC-------
Confidence 11122232 2222233 22 2 3588889999999999977544333343 233345567888777
Q ss_pred CeEEEEEcCCCcEEEEecc
Q 019326 274 PYLVASASSDGVICVWDVR 292 (343)
Q Consensus 274 ~~~l~s~~~dg~i~vwd~~ 292 (343)
.+++++.+..|.-|...
T Consensus 188 --sfvt~sss~~l~~Yky~ 204 (418)
T PF14727_consen 188 --SFVTASSSWTLECYKYQ 204 (418)
T ss_pred --EEEEecCceeEEEecHH
Confidence 89999999888888774
No 408
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.73 E-value=0.32 Score=44.16 Aligned_cols=142 Identities=9% Similarity=0.147 Sum_probs=85.1
Q ss_pred CeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeE
Q 019326 10 KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVT 87 (343)
Q Consensus 10 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 87 (343)
|.|+.|...-... ..........++..-....+-+.-+ +...++-+....+.|||...+....+-.-...+.|.
T Consensus 1 g~~~~~~a~v~~~----~~~~~w~~t~~~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~ 76 (631)
T PF12234_consen 1 GRIRTWTARVDTE----SNKIEWLLTSTFETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIR 76 (631)
T ss_pred CeeEEEEEEEcCC----CCeEEEEEEEEEecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCcee
Confidence 5677776643111 2233333444444333444444443 444444444567999999988754433321258999
Q ss_pred EEEEeCCCCCCCCceEEEeeCCCeEEEEECC---------Ccceeeee--eecc-ccEEEEEEecCCCEEEEEeCCCeEE
Q 019326 88 SLAFYTPQNLSVPRNLFSTSADGFVSIFDAD---------PFVLLTSV--KVHK-KGVNDLAVHHSGKLALTVGRDDCLA 155 (343)
Q Consensus 88 ~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~---------~~~~~~~~--~~~~-~~v~~i~~~~~~~~l~~~~~d~~i~ 155 (343)
++.|..... ++.+++.+....|.+|--. ....++.+ ..|+ .+|.+..|.++|..++.+ ++.+.
T Consensus 77 dLDWtst~d---~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlf 151 (631)
T PF12234_consen 77 DLDWTSTPD---GQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLF 151 (631)
T ss_pred eceeeecCC---CCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEE
Confidence 999975442 3788888999999998541 22334443 2344 588999999998665544 35788
Q ss_pred EEEcc
Q 019326 156 MVNLV 160 (343)
Q Consensus 156 ~wd~~ 160 (343)
++|-.
T Consensus 152 v~dk~ 156 (631)
T PF12234_consen 152 VFDKW 156 (631)
T ss_pred EECCC
Confidence 88743
No 409
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.72 E-value=0.0076 Score=33.85 Aligned_cols=34 Identities=15% Similarity=0.036 Sum_probs=29.7
Q ss_pred cccEEEEEEecCCCEEEEEeCCCeEEEEEccCCce
Q 019326 130 KKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR 164 (343)
Q Consensus 130 ~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 164 (343)
...|..++|+|...+++.+..+|.|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 346899999999999999999999999998 4443
No 410
>PHA02790 Kelch-like protein; Provisional
Probab=96.71 E-value=0.25 Score=44.12 Aligned_cols=180 Identities=8% Similarity=-0.059 Sum_probs=88.2
Q ss_pred CceEEEeeCCC-----eEEEEEcCCCeeee--EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC--CeEEEEECCCc--
Q 019326 52 GTAAASGGTDD-----TIHLYDLSTSSSLG--AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD--GFVSIFDADPF-- 120 (343)
Q Consensus 52 ~~~l~s~~~dg-----~i~iwd~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~-- 120 (343)
+..++.||.++ .+..||..+++... .+... .... +++. -++ ...+.|+.+ ..+..||..+.
T Consensus 272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~-r~~~-~~v~-~~~-----~iYviGG~~~~~sve~ydp~~n~W 343 (480)
T PHA02790 272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSP-RLYA-SGVP-ANN-----KLYVVGGLPNPTSVERWFHGDAAW 343 (480)
T ss_pred CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCch-hhcc-eEEE-ECC-----EEEEECCcCCCCceEEEECCCCeE
Confidence 55567777543 46778887764322 22222 1122 2222 244 567777764 35778887543
Q ss_pred ceeeeeeeccccEEEEEEecCCCEEEEEeCCC---eEEEEEccCCceeEEEEcCCcceE-EEEeCCCCEEEEEeCCcEEE
Q 019326 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD---CLAMVNLVRGRRSFYHKIGKEASL-IKFDGSGEKFFMVTEEKVGI 196 (343)
Q Consensus 121 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~ 196 (343)
..+..+........ + ..-+++..+.||.++ .+..||.++++-......+.+... .+..-++...+.+ |...+
T Consensus 344 ~~~~~l~~~r~~~~-~-~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~G--G~~e~ 419 (480)
T PHA02790 344 VNMPSLLKPRCNPA-V-ASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG--RNAEF 419 (480)
T ss_pred EECCCCCCCCcccE-E-EEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEEC--CceEE
Confidence 22222221111111 1 223566777777653 467888877654333222222111 1222345544444 34677
Q ss_pred EEcccceeEEE--ecCCcceEEeeecCCCeEEEEeCC-----CcEEEEECCCCc
Q 019326 197 HQAEDAKLLCE--LDGKKRILCAAPGENGVLFTGGED-----RSITAWDTNSGK 243 (343)
Q Consensus 197 ~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 243 (343)
||..+.+-... +..+..-.+++..++...+.|+.+ ..+..||..+.+
T Consensus 420 ydp~~~~W~~~~~m~~~r~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~~~ 473 (480)
T PHA02790 420 YCESSNTWTLIDDPIYPRDNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTYS 473 (480)
T ss_pred ecCCCCcEeEcCCCCCCccccEEEEECCEEEEECCcCCCcccceEEEEECCCCe
Confidence 88876543322 222111223333367777777754 346677766543
No 411
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=96.65 E-value=0.072 Score=45.98 Aligned_cols=140 Identities=12% Similarity=0.175 Sum_probs=95.1
Q ss_pred CCCEEE-EEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCC--------CEEEEEeCCcEEEEEccc-ceeEEEec-
Q 019326 141 SGKLAL-TVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSG--------EKFFMVTEEKVGIHQAED-AKLLCELD- 209 (343)
Q Consensus 141 ~~~~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~~d~~~-~~~~~~~~- 209 (343)
+..+|+ .++....++--|++.|+.+-.......+ .+.+.|.. +.++..++..|.-.|.+- +..+....
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~es 556 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVES 556 (776)
T ss_pred CcceEEecCCCcccceeeecccceeeeEeecCCcc-eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeee
Confidence 344443 4555677888899999999998888888 77887743 334444777777777764 32222222
Q ss_pred ----CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCc
Q 019326 210 ----GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGV 285 (343)
Q Consensus 210 ----~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~ 285 (343)
......|......+++++++..|-|++||.-.-.....++ +.+..|..+..+.++. ++++.+. ..
T Consensus 557 KdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP-~lG~aIk~idvta~Gk---------~ilaTCk-~y 625 (776)
T COG5167 557 KDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALP-GLGDAIKHIDVTANGK---------HILATCK-NY 625 (776)
T ss_pred hhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCc-ccccceeeeEeecCCc---------EEEEeec-ce
Confidence 3334444444467899999999999999965333334455 8888999999998887 6665554 46
Q ss_pred EEEEecc
Q 019326 286 ICVWDVR 292 (343)
Q Consensus 286 i~vwd~~ 292 (343)
+.+-|++
T Consensus 626 llL~d~~ 632 (776)
T COG5167 626 LLLTDVP 632 (776)
T ss_pred EEEEecc
Confidence 7777765
No 412
>PHA03098 kelch-like protein; Provisional
Probab=96.54 E-value=0.31 Score=44.30 Aligned_cols=146 Identities=9% Similarity=0.068 Sum_probs=69.9
Q ss_pred EEEecCceEEEeeCC-----CeEEEEEcCCCeeee--EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC------CeEE
Q 019326 47 TVAVSGTAAASGGTD-----DTIHLYDLSTSSSLG--AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD------GFVS 113 (343)
Q Consensus 47 ~l~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d------g~i~ 113 (343)
.+...+..++.||.+ ..+..||..+++-.. .+... ... .+++.. ++ +.++.|+.+ ..+.
T Consensus 338 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~-r~~-~~~~~~-~~-----~iYv~GG~~~~~~~~~~v~ 409 (534)
T PHA03098 338 VTVFNNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFP-RYN-PCVVNV-NN-----LIYVIGGISKNDELLKTVE 409 (534)
T ss_pred EEEECCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcC-Ccc-ceEEEE-CC-----EEEEECCcCCCCcccceEE
Confidence 344457777777765 347778877654322 11111 111 122222 33 566777632 4588
Q ss_pred EEECCCcc--eeeeeeeccccEEEEEEecCCCEEEEEeCC--------CeEEEEEccCCceeEEEEcC--CcceEEEEeC
Q 019326 114 IFDADPFV--LLTSVKVHKKGVNDLAVHHSGKLALTVGRD--------DCLAMVNLVRGRRSFYHKIG--KEASLIKFDG 181 (343)
Q Consensus 114 iwd~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~ 181 (343)
.||+.+.+ .+..+....... ++ ...++..++.|+.+ ..+..||..+++-......+ .....++. .
T Consensus 410 ~yd~~t~~W~~~~~~p~~r~~~-~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~ 486 (534)
T PHA03098 410 CFSLNTNKWSKGSPLPISHYGG-CA-IYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI-F 486 (534)
T ss_pred EEeCCCCeeeecCCCCccccCc-eE-EEECCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE-E
Confidence 89986533 222221111111 12 22345666666643 23888898877643322221 11111222 2
Q ss_pred CCCEEEEEe------CCcEEEEEcccce
Q 019326 182 SGEKFFMVT------EEKVGIHQAEDAK 203 (343)
Q Consensus 182 ~~~~~~~~~------~~~i~~~d~~~~~ 203 (343)
++..++.++ .+.+.+||..+.+
T Consensus 487 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 487 NNKIYVVGGDKYEYYINEIEVYDDKTNT 514 (534)
T ss_pred CCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence 455555552 2356777766544
No 413
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=96.53 E-value=0.41 Score=40.50 Aligned_cols=261 Identities=11% Similarity=0.075 Sum_probs=119.0
Q ss_pred Cce-EEEeeCCC--eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeee
Q 019326 52 GTA-AASGGTDD--TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKV 128 (343)
Q Consensus 52 ~~~-l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 128 (343)
|+. |+++..|| .+.+.|+.+++..+...+. ........++++. +.++-......|+-.|+++.+....+..
T Consensus 47 G~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~-g~~~~g~~~s~~~-----~~~~Yv~~~~~l~~vdL~T~e~~~vy~~ 120 (386)
T PF14583_consen 47 GRKLLFASDFDGNRNLYLLDLATGEITQLTDGP-GDNTFGGFLSPDD-----RALYYVKNGRSLRRVDLDTLEERVVYEV 120 (386)
T ss_dssp S-EEEEEE-TTSS-EEEEEETTT-EEEE---SS--B-TTT-EE-TTS-----SEEEEEETTTEEEEEETTT--EEEEEE-
T ss_pred CCEEEEEeccCCCcceEEEEcccCEEEECccCC-CCCccceEEecCC-----CeEEEEECCCeEEEEECCcCcEEEEEEC
Confidence 544 45455455 4667788888766655443 2222245566776 5665555566889999999877666666
Q ss_pred ccccEEEEEEe--cCCCEEEEEeC----------------------CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCC
Q 019326 129 HKKGVNDLAVH--HSGKLALTVGR----------------------DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGE 184 (343)
Q Consensus 129 ~~~~v~~i~~~--~~~~~l~~~~~----------------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (343)
....+-...|. .++..++-.-. ...|...|+.+|+..........+..+.++|...
T Consensus 121 p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~dp 200 (386)
T PF14583_consen 121 PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTDP 200 (386)
T ss_dssp -TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTEE
T ss_pred CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCCC
Confidence 66655555554 34444432211 2345667888888777777778888999999765
Q ss_pred EEE-EEeCC-----cEEEEEccc-ceeEEEec---CCcceEEeeec-CCCeE-EEE----eCCCcEEEEECCCCceeEEe
Q 019326 185 KFF-MVTEE-----KVGIHQAED-AKLLCELD---GKKRILCAAPG-ENGVL-FTG----GEDRSITAWDTNSGKVAYCI 248 (343)
Q Consensus 185 ~~~-~~~~~-----~i~~~d~~~-~~~~~~~~---~~~~i~~~~~~-~~~~l-~~~----~~dg~i~i~d~~~~~~~~~~ 248 (343)
.++ .|.+| .-++|-+++ +...+.+. ....+..=.|. ++..+ +.+ +.+..|.-+|+.+++.....
T Consensus 201 ~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~ 280 (386)
T PF14583_consen 201 TLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLM 280 (386)
T ss_dssp EEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEE
T ss_pred CEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEE
Confidence 544 44322 135565443 33333332 12223333344 44422 222 22445777888887653322
Q ss_pred cccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC----------------CcEEEEeccCccccCCCc------ccccc
Q 019326 249 EDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD----------------GVICVWDVRMAIKEKPLP------LAEAK 306 (343)
Q Consensus 249 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d----------------g~i~vwd~~~~~~~~~~~------~~~~~ 306 (343)
. ..+...+..++++. +++-=+.| --|+++++..+....... +....
T Consensus 281 ~---~p~~~H~~ss~Dg~---------L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~ 348 (386)
T PF14583_consen 281 E---MPWCSHFMSSPDGK---------LFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGD 348 (386)
T ss_dssp E---E-SEEEEEE-TTSS---------EEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTB
T ss_pred e---CCceeeeEEcCCCC---------EEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCC
Confidence 2 22344455555554 44433333 246677776653211000 00000
Q ss_pred cccceeEEEcCCCCceeccccCCC
Q 019326 307 TNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 307 ~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
....=.-..||||++.++-.+..+
T Consensus 349 ~q~~hPhp~FSPDgk~VlF~Sd~~ 372 (386)
T PF14583_consen 349 RQVTHPHPSFSPDGKWVLFRSDME 372 (386)
T ss_dssp SSTT----EE-TTSSEEEEEE-TT
T ss_pred CccCCCCCccCCCCCEEEEECCCC
Confidence 000124577999999887665543
No 414
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.49 E-value=0.14 Score=46.33 Aligned_cols=169 Identities=12% Similarity=0.103 Sum_probs=93.0
Q ss_pred CCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEe----ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEE
Q 019326 42 LSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAI----HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFD 116 (343)
Q Consensus 42 ~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 116 (343)
...+..+.|+ ...|++...+|++++|++- |+.+... ... ...|..+.+..+| ++.-..+|.+.+-+
T Consensus 83 ~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~-ge~ie~~svg~e~~-~~~I~ec~~f~~G-------Vavlt~~g~v~~i~ 153 (829)
T KOG2280|consen 83 HGELIGMGWSDDEELICVQKDGTVHVYGLL-GEFIESNSVGFESQ-MSDIVECRFFHNG-------VAVLTVSGQVILIN 153 (829)
T ss_pred CCCeeeecccCCceEEEEeccceEEEeecc-hhhhcccccccccc-cCceeEEEEecCc-------eEEEecCCcEEEEc
Confidence 3478899999 8889999999999999986 4433331 222 3457777777777 55555566666554
Q ss_pred CCCcceeeeeee---ccccEEEEEEecCC---CEEEEEe-CCCeEEEEEccC--CceeEEEEcCCcceEEEEeCCCCEEE
Q 019326 117 ADPFVLLTSVKV---HKKGVNDLAVHHSG---KLALTVG-RDDCLAMVNLVR--GRRSFYHKIGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 117 ~~~~~~~~~~~~---~~~~v~~i~~~~~~---~~l~~~~-~d~~i~~wd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
-.......++.. ..-+-.+-...+++ ..++-.. ..+ ..++-... .+..........+..+..+|+.++++
T Consensus 154 ~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~la 232 (829)
T KOG2280|consen 154 GVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHALSWPNSSVVKISVSPNRRFLA 232 (829)
T ss_pred CCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccccccCCCCceEEEEEEcCCcceEE
Confidence 322222222221 11111222222221 1111111 000 01111111 11111111235677799999999999
Q ss_pred EE-eCCcEEEEEcccceeEEEec--CCcceEEeeec
Q 019326 188 MV-TEEKVGIHQAEDAKLLCELD--GKKRILCAAPG 220 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~ 220 (343)
.- ..|.+.+.+....+....+. ...+...++|.
T Consensus 233 Lyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~Wc 268 (829)
T KOG2280|consen 233 LYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAWC 268 (829)
T ss_pred EEecCCcEEEEecchhhhhhccCCCCCCchHhceee
Confidence 88 89999999888877777766 22333355554
No 415
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.23 E-value=0.29 Score=44.43 Aligned_cols=108 Identities=12% Similarity=0.104 Sum_probs=71.6
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc--CCcceEEEEe--CCCCEEEEE-eCCcEEEEEcc------
Q 019326 132 GVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI--GKEASLIKFD--GSGEKFFMV-TEEKVGIHQAE------ 200 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~-~~~~i~~~d~~------ 200 (343)
...-+.-+.-++..++-+....+.|||.+.+.......+ .+.|..+.|. |+++.+++. -.+.|.+|.-.
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~ 110 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN 110 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence 444455555555555555566799999998886666555 6778888874 577766665 88888887432
Q ss_pred ---cceeEEEec----CCcceEEeeecCCCeEEEEeCCCcEEEEECC
Q 019326 201 ---DAKLLCELD----GKKRILCAAPGENGVLFTGGEDRSITAWDTN 240 (343)
Q Consensus 201 ---~~~~~~~~~----~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~ 240 (343)
....++.+. .+.+|.+..|.+++.+++|+ ++.+.|+|-.
T Consensus 111 ~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s-GNqlfv~dk~ 156 (631)
T PF12234_consen 111 KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS-GNQLFVFDKW 156 (631)
T ss_pred CCcccceeEEEEeecCCCCCccceeEecCCeEEEEe-CCEEEEECCC
Confidence 123344443 34678888888777777776 4568888753
No 416
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=96.09 E-value=0.6 Score=37.92 Aligned_cols=202 Identities=11% Similarity=0.124 Sum_probs=119.1
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC-------Ccceeeeeee-----ccccEEEEEEecCC----------
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD-------PFVLLTSVKV-----HKKGVNDLAVHHSG---------- 142 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-------~~~~~~~~~~-----~~~~v~~i~~~~~~---------- 142 (343)
--+.|+++|.+ .+-++....+...+||.. ...++-++.. .....+.+.|+...
T Consensus 24 N~WGia~~p~~-----~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~ 98 (336)
T TIGR03118 24 NAWGLSYRPGG-----PFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGIT 98 (336)
T ss_pred ccceeEecCCC-----CEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcc
Confidence 34679999988 566666677899999986 1122333331 12356777776432
Q ss_pred --CEEEEEeCCCeEEEEEccCCce---eEEEEc----CCcc-eEEEEe--CCCCEEEEE--eCCcEEEEEcccceeEEE-
Q 019326 143 --KLALTVGRDDCLAMVNLVRGRR---SFYHKI----GKEA-SLIKFD--GSGEKFFMV--TEEKVGIHQAEDAKLLCE- 207 (343)
Q Consensus 143 --~~l~~~~~d~~i~~wd~~~~~~---~~~~~~----~~~~-~~~~~~--~~~~~~~~~--~~~~i~~~d~~~~~~~~~- 207 (343)
..++.+++||+|.-|...-+.. ...... ...+ ..+++. ..+.+|+.+ ..++|.+||-.-.+....
T Consensus 99 ~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g 178 (336)
T TIGR03118 99 GPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPG 178 (336)
T ss_pred cceeEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCC
Confidence 2367888999999998543322 111111 1222 224544 346777777 899999998654332211
Q ss_pred -ec------CCcc--eEE------eee---c-CCCeEEEEeCCCcEEEEECCCCceeEEec-ccccccEEEEEEEecCCC
Q 019326 208 -LD------GKKR--ILC------AAP---G-ENGVLFTGGEDRSITAWDTNSGKVAYCIE-DAHSARVKGIVVLTKNDG 267 (343)
Q Consensus 208 -~~------~~~~--i~~------~~~---~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~ 267 (343)
+. ...+ |.. +.+ . +...=+.|..-|.|-+||.. ++.++++. .+.-...+.|+..|..-.
T Consensus 179 ~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG 257 (336)
T TIGR03118 179 SFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFG 257 (336)
T ss_pred CccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhC
Confidence 11 0011 111 111 1 11223344456789999987 88888775 234456688888775421
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 268 GSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 268 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
...+.+|+--=.||+|..||..++.
T Consensus 258 ---~~sg~lLVGNFGDG~InaFD~~sG~ 282 (336)
T TIGR03118 258 ---SLSGALLVGNFGDGTINAYDPQSGA 282 (336)
T ss_pred ---CCCCCeEEeecCCceeEEecCCCCc
Confidence 2233467766679999999998774
No 417
>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Probab=96.05 E-value=0.82 Score=40.40 Aligned_cols=267 Identities=10% Similarity=0.062 Sum_probs=137.2
Q ss_pred CCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC
Q 019326 41 HLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP 119 (343)
Q Consensus 41 h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 119 (343)
...+|..+.++ .+.+..|+.|| +..||..+++.++.-......+|..+...-.+ .+..|+.+| |++.+.+.
T Consensus 163 ~d~~V~aLv~D~~g~lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg------~LWVGTdqG-v~~~e~~G 234 (671)
T COG3292 163 KDTPVVALVFDANGRLWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQG------RLWVGTDQG-VYLQEAEG 234 (671)
T ss_pred cCccceeeeeeccCcEEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcC------cEEEEeccc-eEEEchhh
Confidence 35678888888 77888899988 67788888887766555423677777766665 788888887 66677665
Q ss_pred cceeeeee-eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC---CcceEEEEeCCCCEEEEEeCCcEE
Q 019326 120 FVLLTSVK-VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG---KEASLIKFDGSGEKFFMVTEEKVG 195 (343)
Q Consensus 120 ~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~ 195 (343)
.+...-.. ...+.|..+.-..+| .+..|+.+|-.+.---+.+-.....+.. ..+..+..+.+|..-+...++.++
T Consensus 235 ~~~sn~~~~lp~~~I~ll~qD~qG-~lWiGTenGl~r~~l~rq~Lq~~~~~~~l~~S~vnsL~~D~dGsLWv~t~~giv~ 313 (671)
T COG3292 235 WRASNWGPMLPSGNILLLVQDAQG-ELWIGTENGLWRTRLPRQGLQIPLSKMHLGVSTVNSLWLDTDGSLWVGTYGGIVR 313 (671)
T ss_pred ccccccCCCCcchheeeeecccCC-CEEEeecccceeEecCCCCccccccccCCccccccceeeccCCCEeeeccCceEE
Confidence 32221111 123345444444444 5666776665433322222222222222 334556666666665555555555
Q ss_pred EEEcccceeEEEec-CCcceE---Eeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCC
Q 019326 196 IHQAEDAKLLCELD-GKKRIL---CAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGST 270 (343)
Q Consensus 196 ~~d~~~~~~~~~~~-~~~~i~---~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 270 (343)
+-+.. ......+. ..+.+. ..+.. .+..+--...-|.+.+-+-.++..+.........-|+.+++...+
T Consensus 314 ~~~a~-w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~Rg~nit~~~~d~~g----- 387 (671)
T COG3292 314 YLTAD-WKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLRGMNITTTLEDSRG----- 387 (671)
T ss_pred Eecch-hhheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeeccccccchhhhccCC-----
Confidence 44322 22211111 111111 11110 111122222223344445555555554432333455666665533
Q ss_pred CCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 271 AENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 271 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
.+..++...-+..|+.++. ..+.........++|..+--.++++ +-.++..+
T Consensus 388 -----~lWlgs~q~GLsrl~n~n~--~avlde~agl~ss~V~aived~dns-LWIGTs~G 439 (671)
T COG3292 388 -----RLWLGSMQNGLSRLDNKNE--WAVLDEDAGLPSSEVSAIVEDPDNS-LWIGTSGG 439 (671)
T ss_pred -----cEEEEecccchhhhccCCc--ccccccccCCcccceeeeeecCCCC-EEEeccCC
Confidence 4666666645666666651 1111222233455688888888888 44455554
No 418
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.93 E-value=0.69 Score=37.30 Aligned_cols=156 Identities=9% Similarity=0.097 Sum_probs=100.9
Q ss_pred CCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC
Q 019326 40 AHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA 117 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 117 (343)
|-...|.++.|+ .+.|++......-.|+=..+|+.++.+.-..-...-.+.+..++ ++.++--.++.+.++.+
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n-----~fvi~dER~~~l~~~~v 157 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGN-----QFVIVDERDRALYLFTV 157 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCC-----EEEEEehhcceEEEEEE
Confidence 445559999999 56677666666666777777998888754323555678888777 56666667888888877
Q ss_pred CCcceeeeee---------ec-cccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-----------CCcceE
Q 019326 118 DPFVLLTSVK---------VH-KKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-----------GKEASL 176 (343)
Q Consensus 118 ~~~~~~~~~~---------~~-~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-----------~~~~~~ 176 (343)
+....+..++ .+ +.....++|.|....|+.+-+-+-+.+|............. -..++.
T Consensus 158 d~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSg 237 (316)
T COG3204 158 DADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSG 237 (316)
T ss_pred cCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeecccc
Confidence 5432221111 12 45678899999999999988888888887764432111111 134667
Q ss_pred EEEeCCCCEEEEE--eCCcEEEEEcc
Q 019326 177 IKFDGSGEKFFMV--TEEKVGIHQAE 200 (343)
Q Consensus 177 ~~~~~~~~~~~~~--~~~~i~~~d~~ 200 (343)
+.|++....+++- .++.+.-.|..
T Consensus 238 l~~~~~~~~LLVLS~ESr~l~Evd~~ 263 (316)
T COG3204 238 LEFNAITNSLLVLSDESRRLLEVDLS 263 (316)
T ss_pred ceecCCCCcEEEEecCCceEEEEecC
Confidence 7887755544444 45555555543
No 419
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=95.91 E-value=0.8 Score=37.82 Aligned_cols=148 Identities=11% Similarity=0.096 Sum_probs=78.8
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG 162 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~ 162 (343)
...+..+..++++ ++++++..-....-||.-...-...-+.....|.+|.|.|++...+. ...|.|+.=+....
T Consensus 144 ~gs~~~~~r~~dG-----~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~-~~Gg~~~~s~~~~~ 217 (302)
T PF14870_consen 144 SGSINDITRSSDG-----RYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWML-ARGGQIQFSDDPDD 217 (302)
T ss_dssp ---EEEEEE-TTS------EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEE-ETTTEEEEEE-TTE
T ss_pred cceeEeEEECCCC-----cEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEE-eCCcEEEEccCCCC
Confidence 5788889889998 67766666555667775421111112224568999999999766554 48888888772211
Q ss_pred ceeEEE---E---cCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec----CCcceEEeeecCCCeEEEEeCCC
Q 019326 163 RRSFYH---K---IGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD----GKKRILCAAPGENGVLFTGGEDR 232 (343)
Q Consensus 163 ~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~----~~~~i~~~~~~~~~~l~~~~~dg 232 (343)
...... . ....+..+++.++++..+++..+. .+.....++..+..+ -+..+..+.|.+.+.-++-+.+|
T Consensus 218 ~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~-l~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG~~G 296 (302)
T PF14870_consen 218 GETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSGT-LLVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLGQDG 296 (302)
T ss_dssp EEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT--EEEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE-STT
T ss_pred ccccccccCCcccCceeeEEEEecCCCCEEEEeCCcc-EEEeCCCCccceECccccCCCCceEEEEEcCCCceEEECCCc
Confidence 111111 1 112357789999988888776664 345556666666554 34567888887555555566788
Q ss_pred cEEEE
Q 019326 233 SITAW 237 (343)
Q Consensus 233 ~i~i~ 237 (343)
.|--|
T Consensus 297 ~ll~~ 301 (302)
T PF14870_consen 297 VLLRY 301 (302)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77655
No 420
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.82 E-value=0.19 Score=47.81 Aligned_cols=137 Identities=11% Similarity=0.021 Sum_probs=85.5
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCccee-----eeeee------ccccEEEEEEecCC-CEEEEEeC
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL-----TSVKV------HKKGVNDLAVHHSG-KLALTVGR 150 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~------~~~~v~~i~~~~~~-~~l~~~~~ 150 (343)
.-++..+...++... ..++..+.+-.|..||+++...- .-+.. ......++.|+|.- ...+....
T Consensus 100 ~~pi~~~v~~~D~t~---s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~ 176 (1405)
T KOG3630|consen 100 EIPIVIFVCFHDATD---SVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLS 176 (1405)
T ss_pred cccceEEEeccCCce---EEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhcc
Confidence 456666666677511 23333344458899998653211 11111 12345677788854 34566778
Q ss_pred CCeEEEEEccCCceeE-EEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-----CCcceEEeeecCCC
Q 019326 151 DDCLAMVNLVRGRRSF-YHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-----GKKRILCAAPGENG 223 (343)
Q Consensus 151 d~~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-----~~~~i~~~~~~~~~ 223 (343)
|+.|++..+....... .........+++|+|.|+.++++ ..|.+.-|...- +....+. ....|.+++|-...
T Consensus 177 dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~l-eik~~ip~Pp~~e~yrvl~v~Wl~t~ 255 (1405)
T KOG3630|consen 177 DLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSL-EIKSEIPEPPVEENYRVLSVTWLSTQ 255 (1405)
T ss_pred ccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeeccc-ceeecccCCCcCCCcceeEEEEecce
Confidence 8888888775544322 33566778999999999999999 888888886543 3223322 34779999997443
No 421
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.81 E-value=0.088 Score=41.24 Aligned_cols=63 Identities=11% Similarity=0.163 Sum_probs=39.1
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCceeEEE---------------EcCCcceEEEEeCCCCEEEEEeCCcEEEEEcc
Q 019326 138 VHHSGKLALTVGRDDCLAMVNLVRGRRSFYH---------------KIGKEASLIKFDGSGEKFFMVTEEKVGIHQAE 200 (343)
Q Consensus 138 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 200 (343)
+..++.++++.+.+|.+++||+.+++.+... .....+..+.++.+|.-+++..++..+.|+..
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~ 95 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPD 95 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEeccc
Confidence 4456789999999999999999988754322 11233444555555555544444555555443
No 422
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=95.81 E-value=0.72 Score=42.46 Aligned_cols=112 Identities=13% Similarity=0.089 Sum_probs=74.3
Q ss_pred CCeEEEEec----CceEEEeeCCCeEEEEEcCCC-----------ee-------eeEeccCCCCCeEEEEEe--CCCCCC
Q 019326 43 SPITTVAVS----GTAAASGGTDDTIHLYDLSTS-----------SS-------LGAIHHHESSSVTSLAFY--TPQNLS 98 (343)
Q Consensus 43 ~~v~~l~~~----~~~l~s~~~dg~i~iwd~~~~-----------~~-------~~~~~~~~~~~v~~l~~~--~~~~~~ 98 (343)
..|+.|... .+.|+.+..||.|.+|.+++- +. ...+........+.++++ ...
T Consensus 101 HtIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~--- 177 (717)
T PF08728_consen 101 HTINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKS--- 177 (717)
T ss_pred ceeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcc---
Confidence 457777665 568999999999999976320 00 001222224789999998 555
Q ss_pred CCceEEEeeCCCeEEEEECCCc--c-eeeeeeeccccEEEEEEecCC---C---EEEEEeCCCeEEEEEc
Q 019326 99 VPRNLFSTSADGFVSIFDADPF--V-LLTSVKVHKKGVNDLAVHHSG---K---LALTVGRDDCLAMVNL 159 (343)
Q Consensus 99 ~~~~l~s~~~dg~i~iwd~~~~--~-~~~~~~~~~~~v~~i~~~~~~---~---~l~~~~~d~~i~~wd~ 159 (343)
++||+++....|.||-.... + ....-..+...|-+|+|.++. . .+++++-.|.+.+|++
T Consensus 178 --rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 178 --RLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred --eEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 68888888888888765331 1 111111255678899997753 2 7788889999999888
No 423
>PRK13684 Ycf48-like protein; Provisional
Probab=95.73 E-value=1.1 Score=37.95 Aligned_cols=150 Identities=13% Similarity=0.106 Sum_probs=87.7
Q ss_pred cccEEEEEEecCCCEEEEEeCCCeEEEEEccCC-cee--EEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEE
Q 019326 130 KKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG-RRS--FYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLC 206 (343)
Q Consensus 130 ~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 206 (343)
...+..+.+.|++.++++ +..|.+..- .+.+ +.- ........+..+.+.++++.++++..+.+.+-....+....
T Consensus 172 ~g~~~~i~~~~~g~~v~~-g~~G~i~~s-~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~ 249 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAV-SSRGNFYST-WEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWS 249 (334)
T ss_pred cceEEEEEECCCCeEEEE-eCCceEEEE-cCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCCCCCccc
Confidence 456888999998765544 455655432 1122 211 11223356788899999998888777766543344444444
Q ss_pred EecC-----CcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecc--cccccEEEEEEEecCCCCCCCCCCeEEEE
Q 019326 207 ELDG-----KKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIED--AHSARVKGIVVLTKNDGGSTAENPYLVAS 279 (343)
Q Consensus 207 ~~~~-----~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~l~s 279 (343)
.... ...+..+.+.+.+.+++++.+|.+. .....++.-..... .-......+.+..++ ..+.
T Consensus 250 ~~~~~~~~~~~~l~~v~~~~~~~~~~~G~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 318 (334)
T PRK13684 250 KPIIPEITNGYGYLDLAYRTPGEIWAGGGNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPE----------KGFV 318 (334)
T ss_pred cccCCccccccceeeEEEcCCCCEEEEcCCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCC----------ceEE
Confidence 3322 2346777777665566677778665 44555554444331 122357777777665 3555
Q ss_pred EcCCCcEEEEecc
Q 019326 280 ASSDGVICVWDVR 292 (343)
Q Consensus 280 ~~~dg~i~vwd~~ 292 (343)
.+..|.|.-|+-.
T Consensus 319 ~G~~G~il~~~~~ 331 (334)
T PRK13684 319 LGQRGVLLRYVGS 331 (334)
T ss_pred ECCCceEEEecCC
Confidence 6678888877643
No 424
>PHA02790 Kelch-like protein; Provisional
Probab=95.71 E-value=1.5 Score=39.31 Aligned_cols=107 Identities=7% Similarity=-0.067 Sum_probs=53.1
Q ss_pred EEecCceEEEeeCC--CeEEEEEcCCCeee--eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC---eEEEEECCCc
Q 019326 48 VAVSGTAAASGGTD--DTIHLYDLSTSSSL--GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG---FVSIFDADPF 120 (343)
Q Consensus 48 l~~~~~~l~s~~~d--g~i~iwd~~~~~~~--~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~ 120 (343)
+...+...+.||.+ ..+..||..+++-. ..+... .... +++.. ++ +..+.|+.++ .+..||.++.
T Consensus 315 v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~-r~~~-~~~~~-~g-----~IYviGG~~~~~~~ve~ydp~~~ 386 (480)
T PHA02790 315 VPANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKP-RCNP-AVASI-NN-----VIYVIGGHSETDTTTEYLLPNHD 386 (480)
T ss_pred EEECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCC-Cccc-EEEEE-CC-----EEEEecCcCCCCccEEEEeCCCC
Confidence 34446677777754 35778887665332 222211 1111 22222 34 5677777653 4677887653
Q ss_pred c--eeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEE
Q 019326 121 V--LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFY 167 (343)
Q Consensus 121 ~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 167 (343)
+ .+..+....... +++ .-+++..+.|+ .+..||.++++-...
T Consensus 387 ~W~~~~~m~~~r~~~-~~~-~~~~~IYv~GG---~~e~ydp~~~~W~~~ 430 (480)
T PHA02790 387 QWQFGPSTYYPHYKS-CAL-VFGRRLFLVGR---NAEFYCESSNTWTLI 430 (480)
T ss_pred EEEeCCCCCCccccc-eEE-EECCEEEEECC---ceEEecCCCCcEeEc
Confidence 2 222221111111 121 23455555553 577889887765433
No 425
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=95.71 E-value=0.87 Score=36.75 Aligned_cols=152 Identities=16% Similarity=0.137 Sum_probs=92.2
Q ss_pred CCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCCC-CCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc-
Q 019326 43 SPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHES-SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF- 120 (343)
Q Consensus 43 ~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~- 120 (343)
+-+..+.+++++...+..+.-++|.|+.+......+..-.. +--.++..+ + ++...+..|.-+.+.|+.+.
T Consensus 87 ~l~~Dv~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vs--G-----n~aYVadlddgfLivdvsdps 159 (370)
T COG5276 87 DLFADVRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVS--G-----NYAYVADLDDGFLIVDVSDPS 159 (370)
T ss_pred hhhheeEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEec--C-----CEEEEeeccCcEEEEECCCCC
Confidence 34555667788999988888899999987654443332212 334444444 4 57777786777778888543
Q ss_pred --ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE---EcCCcceEEEEeCCCCEEEEEeCCcEE
Q 019326 121 --VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH---KIGKEASLIKFDGSGEKFFMVTEEKVG 195 (343)
Q Consensus 121 --~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~ 195 (343)
++...+......-..++.+ |++-..+..|+-+.+.|+......... .....+..+..+++..+++. .+..+.
T Consensus 160 sP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vv-y~egvl 236 (370)
T COG5276 160 SPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVV-YDEGVL 236 (370)
T ss_pred CceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEE-cccceE
Confidence 2333444344444556665 667788889999999999766533332 22334555555554433333 444555
Q ss_pred EEEccccee
Q 019326 196 IHQAEDAKL 204 (343)
Q Consensus 196 ~~d~~~~~~ 204 (343)
+-|..+.+.
T Consensus 237 ivd~s~~ss 245 (370)
T COG5276 237 IVDVSGPSS 245 (370)
T ss_pred EEecCCCCC
Confidence 666655443
No 426
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.57 E-value=0.2 Score=47.63 Aligned_cols=142 Identities=13% Similarity=0.013 Sum_probs=92.5
Q ss_pred CcceEEEEeCCCCEEEEE-e--CCcEEEEEcccceeEEE-----ec-------CCcceEEeeecC--CCeEEEEeCCCcE
Q 019326 172 KEASLIKFDGSGEKFFMV-T--EEKVGIHQAEDAKLLCE-----LD-------GKKRILCAAPGE--NGVLFTGGEDRSI 234 (343)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~-~--~~~i~~~d~~~~~~~~~-----~~-------~~~~i~~~~~~~--~~~l~~~~~dg~i 234 (343)
..+..+...+++...++. . +-.|..||++....... +. ...-..++.|.+ ....+.+..|+.|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl 180 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL 180 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence 445566677777766666 3 33688899886443221 11 123345566653 3356677789999
Q ss_pred EEEECCCCc-eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeE
Q 019326 235 TAWDTNSGK-VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTC 313 (343)
Q Consensus 235 ~i~d~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~ 313 (343)
++..+.... .+..++ -....++++|++.+. .++.|-..|++.-|...-..+ ..++........+|.|
T Consensus 181 ~V~~~~~~~~~v~s~p--~t~~~Tav~WSprGK---------Ql~iG~nnGt~vQy~P~leik-~~ip~Pp~~e~yrvl~ 248 (1405)
T KOG3630|consen 181 RVKSTKQLAQNVTSFP--VTNSQTAVLWSPRGK---------QLFIGRNNGTEVQYEPSLEIK-SEIPEPPVEENYRVLS 248 (1405)
T ss_pred hhhhhhhhhhhhcccC--cccceeeEEeccccc---------eeeEecCCCeEEEeeccccee-ecccCCCcCCCcceeE
Confidence 998776433 233333 667889999999988 999999999999987764411 1122222333678999
Q ss_pred EEcCCCCceecc
Q 019326 314 LAGSSTKSFKRP 325 (343)
Q Consensus 314 ~~~s~~~~~~~~ 325 (343)
+.|-....|++.
T Consensus 249 v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 249 VTWLSTQEFLVV 260 (1405)
T ss_pred EEEecceeEEEE
Confidence 999888887653
No 427
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.34 E-value=0.22 Score=39.09 Aligned_cols=70 Identities=13% Similarity=0.212 Sum_probs=50.3
Q ss_pred CCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEe-------c-------cCCCCCeEEEEEeCCCCCCCCceEEEeeC
Q 019326 43 SPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAI-------H-------HHESSSVTSLAFYTPQNLSVPRNLFSTSA 108 (343)
Q Consensus 43 ~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------~-------~~~~~~v~~l~~~~~~~~~~~~~l~s~~~ 108 (343)
.++..+...+++|++-+.+|.+++||+.+++.+..- . .. ...|..+.++.+| .-+++ -.
T Consensus 13 s~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~-~~~i~~~~lt~~G-----~PiV~-ls 85 (219)
T PF07569_consen 13 SPVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSS-SPNITSCSLTSNG-----VPIVT-LS 85 (219)
T ss_pred CceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCC-CCcEEEEEEcCCC-----CEEEE-Ee
Confidence 366667777999999999999999999988654322 1 23 5678888888777 33443 44
Q ss_pred CCeEEEEECCC
Q 019326 109 DGFVSIFDADP 119 (343)
Q Consensus 109 dg~i~iwd~~~ 119 (343)
+|..+.|+.+-
T Consensus 86 ng~~y~y~~~L 96 (219)
T PF07569_consen 86 NGDSYSYSPDL 96 (219)
T ss_pred CCCEEEecccc
Confidence 57788888643
No 428
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=95.30 E-value=1.2 Score=35.91 Aligned_cols=188 Identities=9% Similarity=0.072 Sum_probs=110.0
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCccee---eeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL---TSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
...+..+.++. ++...+..+.-++|.|+.+.... ..+.. .+--.++ .-.|++..++..|.-+.+.|+
T Consensus 86 ~~l~~Dv~vse-------~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt-~gyaygv--~vsGn~aYVadlddgfLivdv 155 (370)
T COG5276 86 RDLFADVRVSE-------EYVYVADWSSGLRIVDISTPDSPTLIGFLNT-DGYAYGV--YVSGNYAYVADLDDGFLIVDV 155 (370)
T ss_pred hhhhheeEecc-------cEEEEEcCCCceEEEeccCCCCcceeccccC-CceEEEE--EecCCEEEEeeccCcEEEEEC
Confidence 36677778875 46777788888999999764432 22221 1223333 335788888887777889998
Q ss_pred cCCceeEEE---EcC-CcceEEEEeCCCCEEEEE-eCCcEEEEEccccee---EEEecCCcceEEeeecCCCeEEEEeCC
Q 019326 160 VRGRRSFYH---KIG-KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKL---LCELDGKKRILCAAPGENGVLFTGGED 231 (343)
Q Consensus 160 ~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~---~~~~~~~~~i~~~~~~~~~~l~~~~~d 231 (343)
.+.+..... ..+ .....++. .|++...+ .++.+.+.|+.+... +........+.++..+++.-.++-...
T Consensus 156 sdpssP~lagrya~~~~d~~~v~I--SGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~e 233 (370)
T COG5276 156 SDPSSPQLAGRYALPGGDTHDVAI--SGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYDE 233 (370)
T ss_pred CCCCCceeeeeeccCCCCceeEEE--ecCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEccc
Confidence 776543222 222 11233444 46666666 899999999886543 333334446777777766544444334
Q ss_pred CcEEEEECCCCceeEEeccccc---ccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 232 RSITAWDTNSGKVAYCIEDAHS---ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 232 g~i~i~d~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
| +.+-|....+....+..... ..++.+..+.. +...+..+.-+-+-|+.++
T Consensus 234 g-vlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~-----------~~Yvadga~gl~~idisnp 287 (370)
T COG5276 234 G-VLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGE-----------YAYVADGAKGLPIIDISNP 287 (370)
T ss_pred c-eEEEecCCCCCceEeeccccCCcccccceecccc-----------eeeeeccccCceeEeccCC
Confidence 3 66677766654433321112 22333344333 5666666666777777765
No 429
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=95.24 E-value=0.62 Score=40.54 Aligned_cols=143 Identities=10% Similarity=0.118 Sum_probs=91.0
Q ss_pred eEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCC--CCceEEEeeCCCeEEEEECCC-cceeeeeeecc
Q 019326 54 AAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLS--VPRNLFSTSADGFVSIFDADP-FVLLTSVKVHK 130 (343)
Q Consensus 54 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~ 130 (343)
.+..|+....+.--|++.|+.+..+..| ..+ -+.|.|...++ .+..-+.|-.+..|.-.|.+- +..+.... ..
T Consensus 482 i~~dg~~~~kLykmDIErGkvveeW~~~--ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~e-sK 557 (776)
T COG5167 482 IYLDGGERDKLYKMDIERGKVVEEWDLK--DDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVE-SK 557 (776)
T ss_pred EEecCCCcccceeeecccceeeeEeecC--Ccc-eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeee-eh
Confidence 3445666777888899999999999888 344 67788775321 112233444455555556532 22222211 12
Q ss_pred ccEEEEEEec----CCCEEEEEeCCCeEEEEEccCCc-eeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcc
Q 019326 131 KGVNDLAVHH----SGKLALTVGRDDCLAMVNLVRGR-RSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAE 200 (343)
Q Consensus 131 ~~v~~i~~~~----~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 200 (343)
..++--.|+. ...++++++..|-|++||--.-+ ......++..|..+..+.+|.++++.....+.+.|++
T Consensus 558 dY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~yllL~d~~ 632 (776)
T COG5167 558 DYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKNYLLLTDVP 632 (776)
T ss_pred hccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecceEEEEecc
Confidence 2222222222 33589999999999999953322 2334556788889999999999999888888888875
No 430
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.18 E-value=1 Score=34.38 Aligned_cols=102 Identities=13% Similarity=0.042 Sum_probs=68.5
Q ss_pred CCCEEEEEeCC--CeEEEEEccCCceeEEEEcC-CcceE--EEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceE
Q 019326 141 SGKLALTVGRD--DCLAMVNLVRGRRSFYHKIG-KEASL--IKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRIL 215 (343)
Q Consensus 141 ~~~~l~~~~~d--~~i~~wd~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~ 215 (343)
++.++.+.+.- ..|+.||+.+++........ ..+-. +.-..+.-+.++-.++....||..+.+.+..+..++.-.
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~GeGW 134 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGEGW 134 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCcce
Confidence 44666666653 46999999999988777766 22222 222222223333389999999999999999988777777
Q ss_pred EeeecCCCeEEEEeCCCcEEEEECCCCc
Q 019326 216 CAAPGENGVLFTGGEDRSITAWDTNSGK 243 (343)
Q Consensus 216 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 243 (343)
.++.. +..|+.++....++.-|.++..
T Consensus 135 gLt~d-~~~LimsdGsatL~frdP~tfa 161 (262)
T COG3823 135 GLTSD-DKNLIMSDGSATLQFRDPKTFA 161 (262)
T ss_pred eeecC-CcceEeeCCceEEEecCHHHhh
Confidence 77774 4446666556677777766543
No 431
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=95.12 E-value=1.8 Score=36.62 Aligned_cols=236 Identities=14% Similarity=0.104 Sum_probs=118.2
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc--eeeee----eeccccEEEEEEecC---CCEEEEEeCC----
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV--LLTSV----KVHKKGVNDLAVHHS---GKLALTVGRD---- 151 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~----~~~~~~v~~i~~~~~---~~~l~~~~~d---- 151 (343)
..+.|+|.|++ + ++++...|.|++++..... .+..+ .........++++|+ ..+|.+....
T Consensus 3 ~P~~~a~~pdG-----~-l~v~e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~ 76 (331)
T PF07995_consen 3 NPRSMAFLPDG-----R-LLVAERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADED 76 (331)
T ss_dssp SEEEEEEETTS-----C-EEEEETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TS
T ss_pred CceEEEEeCCC-----c-EEEEeCCceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCC
Confidence 35789999998 4 4556779999999933322 12222 123457899999994 2344433331
Q ss_pred -----CeEEEEEccCC-------ceeE-EEEc----CCcceEEEEeCCCCEEEEEeCCc--------------EEEEEcc
Q 019326 152 -----DCLAMVNLVRG-------RRSF-YHKI----GKEASLIKFDGSGEKFFMVTEEK--------------VGIHQAE 200 (343)
Q Consensus 152 -----~~i~~wd~~~~-------~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~--------------i~~~d~~ 200 (343)
..|.-|....+ +.+. .... .+....+.|.|++.+.++..+.. |.-.+..
T Consensus 77 ~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d 156 (331)
T PF07995_consen 77 GGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPD 156 (331)
T ss_dssp SSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETT
T ss_pred CCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEeccc
Confidence 24554555443 1111 1111 35567799999997666663222 2222211
Q ss_pred cceeE-------------EEec-CCcceEEeeecCC-CeEEEEeC--CCcEEEEECCCC---------------------
Q 019326 201 DAKLL-------------CELD-GKKRILCAAPGEN-GVLFTGGE--DRSITAWDTNSG--------------------- 242 (343)
Q Consensus 201 ~~~~~-------------~~~~-~~~~i~~~~~~~~-~~l~~~~~--dg~i~i~d~~~~--------------------- 242 (343)
++.. ..+. .-.....++|++. ..|+++.. ++.=.|--+..+
T Consensus 157 -G~~p~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~ 235 (331)
T PF07995_consen 157 -GSIPADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGD 235 (331)
T ss_dssp -SSB-TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECT
T ss_pred -CcCCCCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCcccc
Confidence 1100 0000 1122346677654 55555432 222122111111
Q ss_pred --------ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEE
Q 019326 243 --------KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCL 314 (343)
Q Consensus 243 --------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~ 314 (343)
.++..+. +...+..+.|.....- -...+.++++.-..+.|....++.................++..+
T Consensus 236 ~~~~~~~~~P~~~~~--~~~ap~G~~~y~g~~f--p~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v 311 (331)
T PF07995_consen 236 APSCPGFVPPVFAYP--PHSAPTGIIFYRGSAF--PEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDV 311 (331)
T ss_dssp GSS-TTS---SEEET--TT--EEEEEEE-SSSS--GGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEE
T ss_pred ccCCCCcCccceeec--CccccCceEEECCccC--ccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEE
Confidence 1333444 4467788888766541 133566788777778888888875432111111112344579999
Q ss_pred EcCCCCceeccccCCCC
Q 019326 315 AGSSTKSFKRPQIGDSA 331 (343)
Q Consensus 315 ~~s~~~~~~~~~~~~~~ 331 (343)
+..|||.+.+....+++
T Consensus 312 ~~~pDG~Lyv~~d~~G~ 328 (331)
T PF07995_consen 312 AQGPDGALYVSDDSDGK 328 (331)
T ss_dssp EEETTSEEEEEE-TTTT
T ss_pred EEcCCCeEEEEECCCCe
Confidence 99999999888776664
No 432
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.99 E-value=2.1 Score=36.80 Aligned_cols=139 Identities=19% Similarity=0.148 Sum_probs=71.5
Q ss_pred CCeEEEEec--CceEEEee-----------CCC-eEEEEEcCC--Ce--eeeEeccCCCCCeEEEEEeCCCCCCCCceEE
Q 019326 43 SPITTVAVS--GTAAASGG-----------TDD-TIHLYDLST--SS--SLGAIHHHESSSVTSLAFYTPQNLSVPRNLF 104 (343)
Q Consensus 43 ~~v~~l~~~--~~~l~s~~-----------~dg-~i~iwd~~~--~~--~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~ 104 (343)
.....|+|+ |+++++-. ..+ .|.+++-.+ ++ ....+... -.....+++.+++ |+
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~-l~~p~Gi~~~~~G-------ly 85 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEE-LSMVTGLAVAVGG-------VY 85 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecC-CCCccceeEecCC-------EE
Confidence 345678888 55544432 223 677776432 22 22344333 3456788888776 34
Q ss_pred EeeCCCeEEEEECCCc-----c--ee-eeeee----ccccEEEEEEecCCCEEEEEeCC-------------------Ce
Q 019326 105 STSADGFVSIFDADPF-----V--LL-TSVKV----HKKGVNDLAVHHSGKLALTVGRD-------------------DC 153 (343)
Q Consensus 105 s~~~dg~i~iwd~~~~-----~--~~-~~~~~----~~~~v~~i~~~~~~~~l~~~~~d-------------------~~ 153 (343)
++......++.|.... + .+ ..+.. +......++|.|+|.+.++.+.. |.
T Consensus 86 V~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~ 165 (367)
T TIGR02604 86 VATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGG 165 (367)
T ss_pred EeCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCce
Confidence 4444433334354211 1 11 11221 12347789999999877665521 34
Q ss_pred EEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE
Q 019326 154 LAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV 189 (343)
Q Consensus 154 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (343)
|.-++..+++......--.....++|+++++.+++-
T Consensus 166 i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~td 201 (367)
T TIGR02604 166 LFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCD 201 (367)
T ss_pred EEEEecCCCeEEEEecCcCCCccceECCCCCEEEEc
Confidence 444554443322111112334568888887776554
No 433
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=94.94 E-value=0.0044 Score=52.67 Aligned_cols=146 Identities=10% Similarity=0.079 Sum_probs=104.9
Q ss_pred EEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEE-EEEeCCCeEEEEEccCCcee
Q 019326 87 TSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLA-LTVGRDDCLAMVNLVRGRRS 165 (343)
Q Consensus 87 ~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~ 165 (343)
....|.+.+ .-++.++.+..+..||-.. +.+.... ..+....++|..++..+ +.+-..+.+.+||+.+....
T Consensus 38 i~~~w~~e~-----~nlavaca~tiv~~YD~ag-q~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytq 110 (615)
T KOG2247|consen 38 IIHRWRPEG-----HNLAVACANTIVIYYDKAG-QVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQ 110 (615)
T ss_pred ceeeEecCC-----CceehhhhhhHHHhhhhhc-ceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHH
Confidence 345677777 4588888888999998644 3333333 34456678888877544 44556789999999765422
Q ss_pred E-EEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEEC
Q 019326 166 F-YHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDT 239 (343)
Q Consensus 166 ~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~ 239 (343)
. .......-.-+.|++....++.+ ..+.+.+|+..+.+...... |..+++++++...++.+.++.|..+.+-..
T Consensus 111 qLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~dcd~~L~v~~q 187 (615)
T KOG2247|consen 111 QLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCDCDNTLSVTTQ 187 (615)
T ss_pred HHhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeecCcHHHHHHhhh
Confidence 1 22222334447889988888888 89999999998887777766 888999999988888888888877655443
No 434
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=94.80 E-value=0.071 Score=49.22 Aligned_cols=107 Identities=17% Similarity=0.093 Sum_probs=66.1
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEE-----------EeCCCCCCCCceEEEeeCCCeEEEEEC---
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLA-----------FYTPQNLSVPRNLFSTSADGFVSIFDA--- 117 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~-----------~~~~~~~~~~~~l~s~~~dg~i~iwd~--- 117 (343)
.-++..+-.++.|++.+.++... ..+.+| ...+..++ .+|+| +.++++..||.++.|.+
T Consensus 195 ~~~ic~~~~~~~i~lL~~~ra~~-~l~rsH-s~~~~d~a~~~~g~~~l~~lSpDG-----tv~a~a~~dG~v~f~Qiyi~ 267 (1283)
T KOG1916|consen 195 KVYICYGLKGGEIRLLNINRALR-SLFRSH-SQRVTDMAFFAEGVLKLASLSPDG-----TVFAWAISDGSVGFYQIYIT 267 (1283)
T ss_pred cceeeeccCCCceeEeeechHHH-HHHHhc-CCCcccHHHHhhchhhheeeCCCC-----cEEEEeecCCccceeeeeee
Confidence 55677778889999887765432 334445 44444433 56777 78999999998888875
Q ss_pred --CCcceeeeeeeccc-cEEEEEEecCC---------CEEEEEeC-CCeEEEEEccCCcee
Q 019326 118 --DPFVLLTSVKVHKK-GVNDLAVHHSG---------KLALTVGR-DDCLAMVNLVRGRRS 165 (343)
Q Consensus 118 --~~~~~~~~~~~~~~-~v~~i~~~~~~---------~~l~~~~~-d~~i~~wd~~~~~~~ 165 (343)
...++...++.|.+ +-.|..|+.+. .++++++. +..+++|.....++.
T Consensus 268 g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 268 GKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred ccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 33456777777773 33333354332 23344333 456888877666654
No 435
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=94.74 E-value=2.9 Score=37.34 Aligned_cols=146 Identities=14% Similarity=0.178 Sum_probs=90.5
Q ss_pred CCeEEEEEeCCCCCCCCceEEEee--CCCeEEEEECCCcceeeeeeeccccEEEEEEecCC----CEEEEEeCCCeEEEE
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTS--ADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG----KLALTVGRDDCLAMV 157 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~----~~l~~~~~d~~i~~w 157 (343)
.++..++|.... +.+++.- .+|.+++=|. +.+..| ..|..++|.|-+ ..+++.-....|.+|
T Consensus 20 HPvhGlaWTDGk-----qVvLT~L~l~~gE~kfGds---~viGqF----EhV~GlsW~P~~~~~~paLLAVQHkkhVtVW 87 (671)
T PF15390_consen 20 HPVHGLAWTDGK-----QVVLTDLQLHNGEPKFGDS---KVIGQF----EHVHGLSWAPPCTADTPALLAVQHKKHVTVW 87 (671)
T ss_pred ccccceEecCCC-----EEEEEeeeeeCCccccCCc---cEeecc----ceeeeeeecCcccCCCCceEEEeccceEEEE
Confidence 578889998544 4555533 2333333221 233333 358889998853 356666777899999
Q ss_pred EccC-----CceeE--EEEcCC----cceEEEEeCCCCEEEEEeCCcEE-EEEcc--cceeEEEecCCcceEEeeec-CC
Q 019326 158 NLVR-----GRRSF--YHKIGK----EASLIKFDGSGEKFFMVTEEKVG-IHQAE--DAKLLCELDGKKRILCAAPG-EN 222 (343)
Q Consensus 158 d~~~-----~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~-~~d~~--~~~~~~~~~~~~~i~~~~~~-~~ 222 (343)
.+.. ++.+. ...... -...+.|+|....+++-....+. +++++ +.+....++..+.|.|.+|. +|
T Consensus 88 qL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG 167 (671)
T PF15390_consen 88 QLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDG 167 (671)
T ss_pred EeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcC
Confidence 8852 22222 222222 34568999999998888555554 44444 45566677789999999998 55
Q ss_pred CeE-EEEeCCCcEEEEECCC
Q 019326 223 GVL-FTGGEDRSITAWDTNS 241 (343)
Q Consensus 223 ~~l-~~~~~dg~i~i~d~~~ 241 (343)
+.| ++.+..=.-++||-..
T Consensus 168 ~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 168 QRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred CEEEEEeCCeEEEEEecCch
Confidence 544 4444455677888653
No 436
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=94.59 E-value=1 Score=39.01 Aligned_cols=83 Identities=17% Similarity=0.146 Sum_probs=54.8
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecccc-EEEEEEecCC------------------C
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKG-VNDLAVHHSG------------------K 143 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-v~~i~~~~~~------------------~ 143 (343)
...+.++..+|.+ ++.++...-|.|.++|+.++..++.+++-.+. +.-+.....+ -
T Consensus 307 ~R~~~~i~~sP~~-----~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~ 381 (415)
T PF14655_consen 307 KREGESICLSPSG-----RLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALF 381 (415)
T ss_pred CceEEEEEECCCC-----CEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEE
Confidence 4568899999998 77888777899999999998888888875542 1111111110 1
Q ss_pred EEEEEeCCCeEEEEEccCCceeEEEEc
Q 019326 144 LALTVGRDDCLAMVNLVRGRRSFYHKI 170 (343)
Q Consensus 144 ~l~~~~~d~~i~~wd~~~~~~~~~~~~ 170 (343)
+++-+-.-|.|.+|.++.+.++..+..
T Consensus 382 LvIyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 382 LVIYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred EEEEeccCCeEEEEecCCCCEEEEEEe
Confidence 223344567777887777776554443
No 437
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=94.51 E-value=2.8 Score=36.07 Aligned_cols=152 Identities=13% Similarity=0.078 Sum_probs=92.5
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCC-CCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecc
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHES-SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHK 130 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 130 (343)
...++.++.+|.+..+|..+|+.+...... . ..+..-....++ .+..++.++.+...|..+++.........
T Consensus 111 ~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~-~~~~~~~~~v~~~~------~v~~~s~~g~~~al~~~tG~~~W~~~~~~ 183 (370)
T COG1520 111 DGKIYVGSWDGKLYALDASTGTLVWSRNVG-GSPYYASPPVVGDG------TVYVGTDDGHLYALNADTGTLKWTYETPA 183 (370)
T ss_pred CCeEEEecccceEEEEECCCCcEEEEEecC-CCeEEecCcEEcCc------EEEEecCCCeEEEEEccCCcEEEEEecCC
Confidence 455888899999999999899999988877 3 112222233333 55555578999999999888877755322
Q ss_pred c---cEEEEEEecCCCEEEEEeC--CCeEEEEEccCCceeEEEEcCCcceE-----------EEEeCCCCEEEEEeCCcE
Q 019326 131 K---GVNDLAVHHSGKLALTVGR--DDCLAMVNLVRGRRSFYHKIGKEASL-----------IKFDGSGEKFFMVTEEKV 194 (343)
Q Consensus 131 ~---~v~~i~~~~~~~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~i 194 (343)
. .+..-... ....++.+.. ++.+.-.|.++|...........+.. -...-++.......++.+
T Consensus 184 ~~~~~~~~~~~~-~~~~vy~~~~~~~~~~~a~~~~~G~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~ 262 (370)
T COG1520 184 PLSLSIYGSPAI-ASGTVYVGSDGYDGILYALNAEDGTLKWSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKL 262 (370)
T ss_pred ccccccccCcee-ecceEEEecCCCcceEEEEEccCCcEeeeeeeecccCcccccccccccCceEEECCcEEEEecCCeE
Confidence 1 11111111 2234455544 66788888888887666433222111 111113333333367778
Q ss_pred EEEEcccceeEEEecCC
Q 019326 195 GIHQAEDAKLLCELDGK 211 (343)
Q Consensus 195 ~~~d~~~~~~~~~~~~~ 211 (343)
...+..+++.+..+...
T Consensus 263 ~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 263 LCLDADTGELIWSFPAG 279 (370)
T ss_pred EEEEcCCCceEEEEecc
Confidence 88999999998888754
No 438
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=94.27 E-value=2.8 Score=38.86 Aligned_cols=95 Identities=17% Similarity=0.199 Sum_probs=59.0
Q ss_pred eEEeeec---CCCeEEEEeCCCcEEEEECCC-------C-------------ceeEEecccccccEEEEEEE--ecCCCC
Q 019326 214 ILCAAPG---ENGVLFTGGEDRSITAWDTNS-------G-------------KVAYCIEDAHSARVKGIVVL--TKNDGG 268 (343)
Q Consensus 214 i~~~~~~---~~~~l~~~~~dg~i~i~d~~~-------~-------------~~~~~~~~~h~~~v~~~~~~--~~~~~~ 268 (343)
|+.+... ....|+++.+||.|.+|.+++ . ++...+. -....++++++ ....
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~--v~~SaWGLdIh~~~~~r-- 178 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR--VGASAWGLDIHDYKKSR-- 178 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee--cCCceeEEEEEecCcce--
Confidence 4444443 456899999999999996521 0 1222222 45588999998 4444
Q ss_pred CCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCC
Q 019326 269 STAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTK 320 (343)
Q Consensus 269 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 320 (343)
+||.++....|.||-..... .+............|.+++|-++.
T Consensus 179 -------lIAVSsNs~~VTVFaf~l~~-~r~~~~~s~~~~hNIP~VSFl~~~ 222 (717)
T PF08728_consen 179 -------LIAVSSNSQEVTVFAFALVD-ERFYHVPSHQHSHNIPNVSFLDDD 222 (717)
T ss_pred -------EEEEecCCceEEEEEEeccc-cccccccccccccCCCeeEeecCC
Confidence 88888888888888665531 111111133455678888876543
No 439
>KOG1898 consensus Splicing factor 3b, subunit 3 [RNA processing and modification]
Probab=94.26 E-value=5.4 Score=38.33 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=100.9
Q ss_pred eEEEEECCCcceeeeeeeccc----cEEEEEEecCCC--EEEEEeC-----------CCeEEEEEccCCceeEEEEc--C
Q 019326 111 FVSIFDADPFVLLTSVKVHKK----GVNDLAVHHSGK--LALTVGR-----------DDCLAMVNLVRGRRSFYHKI--G 171 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~~~~----~v~~i~~~~~~~--~l~~~~~-----------d~~i~~wd~~~~~~~~~~~~--~ 171 (343)
.|++.|..+++.+..+....+ .+....|+.... +++++.. +|.++.|++-.......+-+ .
T Consensus 854 ~I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh~T~ 933 (1205)
T KOG1898|consen 854 SIRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLHKTE 933 (1205)
T ss_pred eEEEEcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeeeccC
Confidence 367777766665554442222 456666665432 3333332 34466666543322222222 2
Q ss_pred CcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec---CCcceEEeeecCCCeEEEEeCCCcEEEEE--CCCCceeE
Q 019326 172 KEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD---GKKRILCAAPGENGVLFTGGEDRSITAWD--TNSGKVAY 246 (343)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~dg~i~i~d--~~~~~~~~ 246 (343)
-+....++.|...+++++....+++||+...+++++.. -+..|+.+.+ ....++.|...-.+.++. ....+.+.
T Consensus 934 ~~~~v~Ai~~f~~~~LagvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt-~~~RI~VgD~qeSV~~~~y~~~~n~l~~ 1012 (1205)
T KOG1898|consen 934 IPGPVGAICPFQGRVLAGVGRFLRLYDLGKKKLLRKCELKFIPNRISSIQT-YGARIVVGDIQESVHFVRYRREDNQLIV 1012 (1205)
T ss_pred CCccceEEeccCCEEEEecccEEEEeeCChHHHHhhhhhccCceEEEEEee-cceEEEEeeccceEEEEEEecCCCeEEE
Confidence 23344677788889999999999999999888777655 2566777777 556777777665565544 43333333
Q ss_pred EecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 247 CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 247 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
-..+.-...|+++.+...+ .+|.+..=|.+.+-.+.
T Consensus 1013 fadD~~pR~Vt~~~~lD~~----------tvagaDrfGNi~~vR~P 1048 (1205)
T KOG1898|consen 1013 FADDPVPRHVTALELLDYD----------TVAGADRFGNIAVVRIP 1048 (1205)
T ss_pred EeCCCccceeeEEEEecCC----------ceeeccccCcEEEEECC
Confidence 3333344567777666555 57777666777666654
No 440
>PRK13684 Ycf48-like protein; Provisional
Probab=94.24 E-value=3 Score=35.30 Aligned_cols=145 Identities=7% Similarity=-0.059 Sum_probs=76.2
Q ss_pred CCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec--CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEe
Q 019326 171 GKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD--GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCI 248 (343)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 248 (343)
...+..+.+.|++.+++++..|.+..-....++....+. ....+.++.+.+++.++..+..|.+++=....+..-...
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~~~ 251 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSSRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWSKP 251 (334)
T ss_pred cceEEEEEECCCCeEEEEeCCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCCCCCccccc
Confidence 345677888999888777767765542112223333333 446678888875554444456676653234444433322
Q ss_pred ccc---ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceecc
Q 019326 249 EDA---HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRP 325 (343)
Q Consensus 249 ~~~---h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~ 325 (343)
..+ ....+.++.+.+++. ++.++.+|.|. ...+.++.-...+.. .........+.+-++++..+.
T Consensus 252 ~~~~~~~~~~l~~v~~~~~~~----------~~~~G~~G~v~-~S~d~G~tW~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 319 (334)
T PRK13684 252 IIPEITNGYGYLDLAYRTPGE----------IWAGGGNGTLL-VSKDGGKTWEKDPVG-EEVPSNFYKIVFLDPEKGFVL 319 (334)
T ss_pred cCCccccccceeeEEEcCCCC----------EEEEcCCCeEE-EeCCCCCCCeECCcC-CCCCcceEEEEEeCCCceEEE
Confidence 201 224577888887654 55566677655 344433221111110 111234666666666666555
Q ss_pred cc
Q 019326 326 QI 327 (343)
Q Consensus 326 ~~ 327 (343)
+.
T Consensus 320 G~ 321 (334)
T PRK13684 320 GQ 321 (334)
T ss_pred CC
Confidence 44
No 441
>PRK10115 protease 2; Provisional
Probab=94.23 E-value=4.9 Score=37.80 Aligned_cols=191 Identities=8% Similarity=-0.009 Sum_probs=100.6
Q ss_pred CCeEEEEEeCCCCCCCCceEEEee-CCC----eEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC------C
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTS-ADG----FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD------D 152 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~-~dg----~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d------~ 152 (343)
-.+..+.++|++ ++|+.+. .+| .|++.|+.+++.+...-.... ..++|.++++.|+....+ .
T Consensus 127 ~~l~~~~~Spdg-----~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~ 199 (686)
T PRK10115 127 YTLGGMAITPDN-----TIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPY 199 (686)
T ss_pred EEEeEEEECCCC-----CEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCC
Confidence 457778999998 5665443 333 688999988764322211111 458999998766655432 3
Q ss_pred eEEEEEccCC--ceeEEEEc-CCcce-EEEEeCCCCEEEEE----eCCcEEEEEcc--cceeEEEecCCcceEEeeecCC
Q 019326 153 CLAMVNLVRG--RRSFYHKI-GKEAS-LIKFDGSGEKFFMV----TEEKVGIHQAE--DAKLLCELDGKKRILCAAPGEN 222 (343)
Q Consensus 153 ~i~~wd~~~~--~~~~~~~~-~~~~~-~~~~~~~~~~~~~~----~~~~i~~~d~~--~~~~~~~~~~~~~i~~~~~~~~ 222 (343)
.|+.+++.++ +....... ..... ....+.++++++.. .++.+.+++.. .+.....+........-..+.+
T Consensus 200 ~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (686)
T PRK10115 200 QVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQ 279 (686)
T ss_pred EEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEEeCC
Confidence 6788888877 32223332 22222 22334477766655 34568888843 3433333332222221111223
Q ss_pred CeEEEEeC----CCcEEEEECCCCceeEEecccc-c-ccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 223 GVLFTGGE----DRSITAWDTNSGKVAYCIEDAH-S-ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 223 ~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~h-~-~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+.++.-+. ...|...++........+. .+ . ..|..+.+..+. ++++...+|.-+++-+.
T Consensus 280 ~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~-~~~~~~~i~~~~~~~~~----------l~~~~~~~g~~~l~~~~ 344 (686)
T PRK10115 280 HRFYLRSNRHGKNFGLYRTRVRDEQQWEELI-PPRENIMLEGFTLFTDW----------LVVEERQRGLTSLRQIN 344 (686)
T ss_pred CEEEEEEcCCCCCceEEEecCCCcccCeEEE-CCCCCCEEEEEEEECCE----------EEEEEEeCCEEEEEEEc
Confidence 33333222 2234444554212223333 34 2 367888887432 67777778876666554
No 442
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=94.00 E-value=0.31 Score=26.61 Aligned_cols=32 Identities=9% Similarity=-0.011 Sum_probs=25.8
Q ss_pred ccEEEEEEecCC---CEEEEEeCCCeEEEEEccCC
Q 019326 131 KGVNDLAVHHSG---KLALTVGRDDCLAMVNLVRG 162 (343)
Q Consensus 131 ~~v~~i~~~~~~---~~l~~~~~d~~i~~wd~~~~ 162 (343)
+.|.++.|+|+. .+|+.+-.-|.|.++|++++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 368899999854 47887777899999999853
No 443
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=93.85 E-value=0.45 Score=25.98 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=26.5
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP 119 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 119 (343)
++|.++.|+|... .+.+|+.+-.-|.|.++|+++
T Consensus 1 GAvR~~kFsP~~~--~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPG--GNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCC--cccEEEEEccCCeEEEEEccc
Confidence 4689999998661 115788888889999999984
No 444
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=93.82 E-value=3.1 Score=39.06 Aligned_cols=25 Identities=20% Similarity=0.436 Sum_probs=20.4
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEE
Q 019326 132 GVNDLAVHHSGKLALTVGRDDCLAM 156 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d~~i~~ 156 (343)
.|..|.++|+|.+++..|..|...+
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~v~V~ 110 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRGVVVL 110 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEE
Confidence 6888999999999999988665443
No 445
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.60 E-value=6 Score=36.56 Aligned_cols=193 Identities=13% Similarity=0.157 Sum_probs=96.7
Q ss_pred CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee----eeccccEEEE
Q 019326 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV----KVHKKGVNDL 136 (343)
Q Consensus 61 dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~~~v~~i 136 (343)
--.|+||+.. |+.+..+.-. ...+-.+.|+.+. .|+....+|++++|++-.. .+... ......|..+
T Consensus 63 ~~~I~If~~s-G~lL~~~~w~-~~~lI~mgWs~~e------eLI~v~k~g~v~Vy~~~ge-~ie~~svg~e~~~~~I~ec 133 (829)
T KOG2280|consen 63 RPYIRIFNIS-GQLLGRILWK-HGELIGMGWSDDE------ELICVQKDGTVHVYGLLGE-FIESNSVGFESQMSDIVEC 133 (829)
T ss_pred ceeEEEEecc-ccchHHHHhc-CCCeeeecccCCc------eEEEEeccceEEEeecchh-hhcccccccccccCceeEE
Confidence 3568888875 6666666555 4688899999876 7888999999999998542 22221 1122334445
Q ss_pred EEecCCCEEEEEeCCCeEEEEE-ccCCceeEEEEcC---CcceEEEEeCCCCE--EEEEeC-C-cEEEEEcccce-eEEE
Q 019326 137 AVHHSGKLALTVGRDDCLAMVN-LVRGRRSFYHKIG---KEASLIKFDGSGEK--FFMVTE-E-KVGIHQAEDAK-LLCE 207 (343)
Q Consensus 137 ~~~~~~~~l~~~~~d~~i~~wd-~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~-~-~i~~~d~~~~~-~~~~ 207 (343)
.+..+|-.+++ .+|.+.+-+ ......-.....+ -+..+-...+++.. +...-+ - ...++...... ....
T Consensus 134 ~~f~~GVavlt--~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~ 211 (829)
T KOG2280|consen 134 RFFHNGVAVLT--VSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHA 211 (829)
T ss_pred EEecCceEEEe--cCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccc
Confidence 55545533333 344444332 2221111111101 11122222222111 111111 0 00111111111 1111
Q ss_pred ec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEec
Q 019326 208 LD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTK 264 (343)
Q Consensus 208 ~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~ 264 (343)
+. ....+..+..+ +.++|+-=...|.|.+-+....+.+.++...-..+...++|..+
T Consensus 212 ~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~Wcgn 270 (829)
T KOG2280|consen 212 LSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAWCGN 270 (829)
T ss_pred cCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCchHhceeecC
Confidence 11 33667777777 45688888889999998888777666665222233334555444
No 446
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.46 E-value=2.6 Score=36.40 Aligned_cols=94 Identities=13% Similarity=0.047 Sum_probs=65.1
Q ss_pred CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-----CCcceEEeeecCCCeEEEEeCCCcEEEEECCCC-c
Q 019326 171 GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-----GKKRILCAAPGENGVLFTGGEDRSITAWDTNSG-K 243 (343)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-----~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~ 243 (343)
.+++.++.|++|.+.+++- .+..|.+++....+...... ....|...+|.+..-++.-+..| +.+|-.... +
T Consensus 66 ~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e~A~i~~~G-~e~y~v~pekr 144 (657)
T KOG2377|consen 66 KGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIAFITDQG-IEFYQVLPEKR 144 (657)
T ss_pred CCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCeeEEEEecCC-eEEEEEchhhh
Confidence 4689999999999999999 99999999875433332222 33458888998777666666555 666655432 3
Q ss_pred eeEEecccccccEEEEEEEecCC
Q 019326 244 VAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 244 ~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
.++..+ .|...|+-..|.++..
T Consensus 145 slRlVk-s~~~nvnWy~yc~et~ 166 (657)
T KOG2377|consen 145 SLRLVK-SHNLNVNWYMYCPETA 166 (657)
T ss_pred hhhhhh-hcccCccEEEEccccc
Confidence 344444 6777777777777765
No 447
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=93.33 E-value=4.6 Score=34.45 Aligned_cols=226 Identities=9% Similarity=0.027 Sum_probs=103.1
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-----------------------
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA----------------------- 108 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~----------------------- 108 (343)
.+.++-......|+-.|+++.+....+... ...+-...|..+.. ...++|..
T Consensus 92 ~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p-~~~~g~gt~v~n~d----~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p 166 (386)
T PF14583_consen 92 DRALYYVKNGRSLRRVDLDTLEERVVYEVP-DDWKGYGTWVANSD----CTKLVGIEISREDWKPLTKWKGFREFYEARP 166 (386)
T ss_dssp SSEEEEEETTTEEEEEETTT--EEEEEE---TTEEEEEEEEE-TT----SSEEEEEEEEGGG-----SHHHHHHHHHC--
T ss_pred CCeEEEEECCCeEEEEECCcCcEEEEEECC-cccccccceeeCCC----ccEEEEEEEeehhccCccccHHHHHHHhhCC
Confidence 555554555567888899998766666555 55555566643321 22333321
Q ss_pred CCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCC----e-EEEEEccCCc----eeEEEEcCCcceEEEE
Q 019326 109 DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD----C-LAMVNLVRGR----RSFYHKIGKEASLIKF 179 (343)
Q Consensus 109 dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~----~-i~~wd~~~~~----~~~~~~~~~~~~~~~~ 179 (343)
...|.-.|+.+++....+. ....+..+.|+|....+++-+..| . -+||-+++.. ++........+..=-|
T Consensus 167 ~~~i~~idl~tG~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw 245 (386)
T PF14583_consen 167 HCRIFTIDLKTGERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFW 245 (386)
T ss_dssp -EEEEEEETTT--EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE
T ss_pred CceEEEEECCCCceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccc
Confidence 1234555667766544444 455778889999765555544322 1 3677665432 1222222233444568
Q ss_pred eCCCCEEEEE--e----CCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEe-CC----------------CcEEE
Q 019326 180 DGSGEKFFMV--T----EEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGG-ED----------------RSITA 236 (343)
Q Consensus 180 ~~~~~~~~~~--~----~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~-~d----------------g~i~i 236 (343)
.|+|..+.-- . +..|.-+|+.+++.......+ ....+..+.++.|++|. .| -.|++
T Consensus 246 ~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~p-~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~ 324 (386)
T PF14583_consen 246 VPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEMP-WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYL 324 (386)
T ss_dssp -TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE--SEEEEEE-TTSSEEEEEE-------------------EEEE
T ss_pred cCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeCC-ceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEE
Confidence 8998877654 1 224566777776554322222 22222333444444443 22 14667
Q ss_pred EECCCCceeEEec--------ccccc-cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 237 WDTNSGKVAYCIE--------DAHSA-RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 237 ~d~~~~~~~~~~~--------~~h~~-~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+++..+....-.. .++.. .=....|+|+++ ..|.++...|...||=++
T Consensus 325 ~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk--------~VlF~Sd~~G~~~vY~v~ 381 (386)
T PF14583_consen 325 FDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGK--------WVLFRSDMEGPPAVYLVE 381 (386)
T ss_dssp EETTTTEEEEEEE-------BTTBSSTT----EE-TTSS--------EEEEEE-TTSS-EEEEEE
T ss_pred eccccCceeeeeeccCcceeecCCCccCCCCCccCCCCC--------EEEEECCCCCCccEEEEe
Confidence 8887665432111 01111 123456777765 256677778887777554
No 448
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=93.20 E-value=0.0095 Score=50.76 Aligned_cols=143 Identities=13% Similarity=0.111 Sum_probs=98.0
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEE-Ee
Q 019326 132 GVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLC-EL 208 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~-~~ 208 (343)
......|.|.+.-++.++.+..+..||- .++.......+.....++|+.++..+++. ..+.+.+||+.+....+ .+
T Consensus 36 ~pi~~~w~~e~~nlavaca~tiv~~YD~-agq~~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~ 114 (615)
T KOG2247|consen 36 GPIIHRWRPEGHNLAVACANTIVIYYDK-AGQVILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLES 114 (615)
T ss_pred ccceeeEecCCCceehhhhhhHHHhhhh-hcceecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhc
Confidence 3445678888777888888888999984 44544555556666778888888877666 78999999987633211 11
Q ss_pred cCCcceEEeeecCC-CeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcE
Q 019326 209 DGKKRILCAAPGEN-GVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVI 286 (343)
Q Consensus 209 ~~~~~i~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i 286 (343)
.....-.-+.|+++ ..++.|...|.+.+++..+.+.+...- .|..+++++++.+.+ +.+.++.|..+
T Consensus 115 gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~G-kh~RRgtq~av~lEd----------~vil~dcd~~L 182 (615)
T KOG2247|consen 115 GGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMG-KHQRRGTQIAVTLED----------YVILCDCDNTL 182 (615)
T ss_pred cCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhc-ccccceeEEEecccc----------eeeecCcHHHH
Confidence 11111112556543 467778889999999988776655554 489999999999887 56666665543
No 449
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=93.18 E-value=0.17 Score=46.84 Aligned_cols=98 Identities=9% Similarity=0.128 Sum_probs=55.1
Q ss_pred cCCCCCeEEEEec-C--ceEEEeeCCCeEEEEEcCC--CeeeeEe-----ccCCCCCeEEEEEeCCCCCCCCceEEEeeC
Q 019326 39 PAHLSPITTVAVS-G--TAAASGGTDDTIHLYDLST--SSSLGAI-----HHHESSSVTSLAFYTPQNLSVPRNLFSTSA 108 (343)
Q Consensus 39 ~~h~~~v~~l~~~-~--~~l~s~~~dg~i~iwd~~~--~~~~~~~-----~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~ 108 (343)
+|..+.|-.++|. . ..++ -.-|.+.||+++- |+....+ ... ...+.-+.|.|--- ..-++..+..
T Consensus 129 kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~-gs~~~~V~wcp~~~--~~~~ic~~~~ 203 (1283)
T KOG1916|consen 129 KGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPY-GSDPQLVSWCPIAV--NKVYICYGLK 203 (1283)
T ss_pred hcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcC-CCCcceeeeccccc--ccceeeeccC
Confidence 4556667777775 1 1111 2336788898763 3322222 222 34445555554320 1146777777
Q ss_pred CCeEEEEECCCcceeeeeeeccccEEEEEEecCC
Q 019326 109 DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG 142 (343)
Q Consensus 109 dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~ 142 (343)
++++++.+..+.. ...+++|...+..++|-..|
T Consensus 204 ~~~i~lL~~~ra~-~~l~rsHs~~~~d~a~~~~g 236 (1283)
T KOG1916|consen 204 GGEIRLLNINRAL-RSLFRSHSQRVTDMAFFAEG 236 (1283)
T ss_pred CCceeEeeechHH-HHHHHhcCCCcccHHHHhhc
Confidence 8898888776533 25556688888877776554
No 450
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.01 E-value=1.4 Score=42.95 Aligned_cols=161 Identities=11% Similarity=0.090 Sum_probs=81.5
Q ss_pred eeCCCeEEEEECCCcceeeeeeeccccEEEEEE--------ecCCCEEEEEeCCCeEEEEEccCCc----ee-----EEE
Q 019326 106 TSADGFVSIFDADPFVLLTSVKVHKKGVNDLAV--------HHSGKLALTVGRDDCLAMVNLVRGR----RS-----FYH 168 (343)
Q Consensus 106 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~--------~~~~~~l~~~~~d~~i~~wd~~~~~----~~-----~~~ 168 (343)
.+.|+.+.+|+.+++.....+.+....|..+.. -|.=++++..+.--.|.++-+.-.+ .. ...
T Consensus 95 iTiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i 174 (1311)
T KOG1900|consen 95 ITIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKI 174 (1311)
T ss_pred EEeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceee
Confidence 356789999999987777777766665655543 2222455555555556665443221 10 111
Q ss_pred -EcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEE
Q 019326 169 -KIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYC 247 (343)
Q Consensus 169 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 247 (343)
..+..+.++....+|+.|++|.|+.+ |.+.-...-.-+. .....++. +.+.-..+. +. +..
T Consensus 175 ~~dg~~V~~I~~t~nGRIF~~G~dg~l--yEl~Yq~~~gWf~--~rc~Kicl-------t~s~ls~lv------Ps-~~~ 236 (1311)
T KOG1900|consen 175 SVDGVSVNCITYTENGRIFFAGRDGNL--YELVYQAEDGWFG--SRCRKICL-------TKSVLSSLV------PS-LLS 236 (1311)
T ss_pred ecCCceEEEEEeccCCcEEEeecCCCE--EEEEEeccCchhh--cccccccC-------chhHHHHhh------hh-hhc
Confidence 11344566666666777766655533 3221000000000 00000000 000000000 00 111
Q ss_pred ecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 248 IEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 248 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
+...+..+|..+.+..... .+.+-+..|+|.+|++..
T Consensus 237 ~~~~~~dpI~qi~ID~SR~---------IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 237 VPGSSKDPIRQITIDNSRN---------ILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCCCCCCcceeeEeccccc---------eeeeeccCceEEEEEccC
Confidence 1125677888888887776 888888888999998876
No 451
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=92.92 E-value=8.4 Score=36.32 Aligned_cols=76 Identities=11% Similarity=0.041 Sum_probs=51.7
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC---------ccee---eeee--------eccccEEEEEEecC-
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP---------FVLL---TSVK--------VHKKGVNDLAVHHS- 141 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---------~~~~---~~~~--------~~~~~v~~i~~~~~- 141 (343)
.-.|..+.++|++ .+++..|..|.+.+.=.+. ++.. +++. .+...|..+.|+|.
T Consensus 84 ~f~v~~i~~n~~g-----~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s 158 (717)
T PF10168_consen 84 LFEVHQISLNPTG-----SLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWS 158 (717)
T ss_pred ceeEEEEEECCCC-----CEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCC
Confidence 3568889999999 6788777766444332221 1111 1111 23347899999996
Q ss_pred --CCEEEEEeCCCeEEEEEccCCc
Q 019326 142 --GKLALTVGRDDCLAMVNLVRGR 163 (343)
Q Consensus 142 --~~~l~~~~~d~~i~~wd~~~~~ 163 (343)
+.+|++-..|+++++||+...+
T Consensus 159 ~~~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 159 ESDSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred CCCCeEEEEecCCEEEEEecCCCC
Confidence 4899999999999999997544
No 452
>KOG1896 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit) [RNA processing and modification]
Probab=92.84 E-value=5.1 Score=39.12 Aligned_cols=141 Identities=11% Similarity=0.054 Sum_probs=79.6
Q ss_pred CCeEEEEEeecCCCCCCCCcce---eeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCC-eeeeEeccCCCC
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTL---TLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTS-SSLGAIHHHESS 84 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~---~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~ 84 (343)
.|.+.|||+-..-+.+ +++. +.+.+.. +..+++|..++=-..+|+++.. ..|.+|+++.. ..+..-. - .-
T Consensus 1064 RGr~hi~diIeVVPep--gkP~t~~KlKel~~-eE~KGtVsavceV~G~l~~~~G-qKI~v~~l~r~~~ligVaF-i-D~ 1137 (1366)
T KOG1896|consen 1064 RGRIHIFDIIEVVPEP--GKPFTKNKLKELYI-EEQKGTVSAVCEVRGHLLSSQG-QKIIVRKLDRDSELIGVAF-I-DL 1137 (1366)
T ss_pred cccEEEEEEEEecCCC--CCCcccceeeeeeh-hhcccceEEEEEeccEEEEccC-cEEEEEEeccCCcceeeEE-e-cc
Confidence 6899999986532222 3333 3333332 3467889888776555665543 56999999543 3222111 1 12
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc-ceeeeee-e-ccccEEEEEEecCCC--EEEEEeCCCeEEEEEc
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF-VLLTSVK-V-HKKGVNDLAVHHSGK--LALTVGRDDCLAMVNL 159 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~-~-~~~~v~~i~~~~~~~--~l~~~~~d~~i~~wd~ 159 (343)
++......--. ++|+.|..-..|.+...+.. ..+..+. . ..-.+.++.|.-+|. .++++..++.|.++-.
T Consensus 1138 ~~yv~s~~~vk-----nlIl~gDV~ksisfl~fqeep~rlsL~srd~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y 1212 (1366)
T KOG1896|consen 1138 PLYVHSMKVVK-----NLILAGDVMKSISFLGFQEEPYRLSLLSRDFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMY 1212 (1366)
T ss_pred ceeEEehhhhh-----hheehhhhhhceEEEEEccCceEEEEeecCCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEe
Confidence 22222222222 57777777777776665431 1222221 1 123688888887774 5778888999888865
Q ss_pred c
Q 019326 160 V 160 (343)
Q Consensus 160 ~ 160 (343)
.
T Consensus 1213 ~ 1213 (1366)
T KOG1896|consen 1213 A 1213 (1366)
T ss_pred C
Confidence 4
No 453
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=92.84 E-value=1.5 Score=28.61 Aligned_cols=44 Identities=2% Similarity=-0.157 Sum_probs=31.4
Q ss_pred eCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCC
Q 019326 149 GRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEE 192 (343)
Q Consensus 149 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (343)
..+|.+.-||..+++.......-...+.+++++++..++++.-.
T Consensus 34 ~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et~ 77 (89)
T PF03088_consen 34 RPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAETG 77 (89)
T ss_dssp ---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEEGG
T ss_pred CCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEecc
Confidence 34678888999888765555555678899999999999988433
No 454
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=92.71 E-value=0.88 Score=24.49 Aligned_cols=40 Identities=5% Similarity=0.060 Sum_probs=26.9
Q ss_pred cCCCEEEEEe-CCCeEEEEEccCCceeEEEEcCCcceEEEE
Q 019326 140 HSGKLALTVG-RDDCLAMVNLVRGRRSFYHKIGKEASLIKF 179 (343)
Q Consensus 140 ~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 179 (343)
|+++.|+++. .++.|.++|..+++.............+.+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence 4566555544 578899999988877776666555555544
No 455
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=92.67 E-value=7.5 Score=35.14 Aligned_cols=245 Identities=15% Similarity=0.145 Sum_probs=125.2
Q ss_pred CceEEEeeCCCeEEEEEcCCCe---eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC--eEEEEECCCcceeeee
Q 019326 52 GTAAASGGTDDTIHLYDLSTSS---SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG--FVSIFDADPFVLLTSV 126 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~ 126 (343)
+..++.+..+|.+....+.... .+..+..- ....+++.+..++ +.+|+.|+.-| .+.-|.....+.+..+
T Consensus 222 ~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~-~~~~s~l~~l~~g----~d~lf~gs~~gds~l~~~~~~~l~~~~~~ 296 (504)
T PF10433_consen 222 GDRILLQDEDGDLYLLTLDNDGGSISITYLGTL-CSIASSLTYLKNG----GDYLFVGSEFGDSQLLQISLSNLEVLDSL 296 (504)
T ss_dssp SSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE---S-ESEEEEESTT------EEEEEESSS-EEEEEEESESEEEEEEE
T ss_pred CCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCc-CChhheEEEEcCC----CEEEEEEEecCCcEEEEEeCCCcEEEEec
Confidence 6778889999999888776543 23333321 2455677776654 24788888754 5555554444555555
Q ss_pred eeccccEEEEEEecC---C-C------EEEEEe---CCCeEEEEEccCCce-----eEEEEcCCcceEEEEeC----CCC
Q 019326 127 KVHKKGVNDLAVHHS---G-K------LALTVG---RDDCLAMVNLVRGRR-----SFYHKIGKEASLIKFDG----SGE 184 (343)
Q Consensus 127 ~~~~~~v~~i~~~~~---~-~------~l~~~~---~d~~i~~wd~~~~~~-----~~~~~~~~~~~~~~~~~----~~~ 184 (343)
. .-++|.++++.+. + . .|++++ .+|.+++.. .|-. ......+. +..+-.-+ +..
T Consensus 297 ~-N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr--~Gi~~~~~~~~~~~l~~-v~~iW~l~~~~~~~~ 372 (504)
T PF10433_consen 297 P-NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILR--NGIGIEGLELASSELPG-VTGIWTLKLSSSDHS 372 (504)
T ss_dssp -----SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEE--ESBEEE--EEEEEEEST-EEEEEEE-SSSSSBS
T ss_pred c-CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEe--ccCCceeeeeeccCCCC-ceEEEEeeecCCCce
Confidence 5 4568888888532 1 2 555554 367888764 3322 22223333 33322222 256
Q ss_pred EEEEEeCCcEEEEEcc---cceeEEEe-----cC-CcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEeccccccc
Q 019326 185 KFFMVTEEKVGIHQAE---DAKLLCEL-----DG-KKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSAR 255 (343)
Q Consensus 185 ~~~~~~~~~i~~~d~~---~~~~~~~~-----~~-~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~ 255 (343)
+++.+....-+++.+. ....+..+ .. ...+.+-.+ .++.++=... ..|++.+...++....+.......
T Consensus 373 ~lv~S~~~~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~-~~~~ivQVt~-~~i~l~~~~~~~~~~~w~~~~~~~ 450 (504)
T PF10433_consen 373 YLVLSFPNETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNV-GDGRIVQVTP-KGIRLIDLEDGKLTQEWKPPAGSI 450 (504)
T ss_dssp EEEEEESSEEEEEEES----SSEEEEE---TS-SSS-EEEEEEE-TTTEEEEEES-SEEEEEESSSTSEEEEEE-TTS--
T ss_pred EEEEEcCCceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEc-CCCeEEEEec-CeEEEEECCCCeEEEEEeCCCCCe
Confidence 7777755566666663 23333222 11 122333333 3455554444 348899988888777765334555
Q ss_pred EEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCc-ccccccccceeEEEcCC
Q 019326 256 VKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLP-LAEAKTNSRLTCLAGSS 318 (343)
Q Consensus 256 v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~i~~~~~s~ 318 (343)
|.+.+.... +++.+-.++.+..+.++......... .........|.|+..+|
T Consensus 451 I~~a~~~~~-----------~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p 503 (504)
T PF10433_consen 451 IVAASINDP-----------QVLVALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP 503 (504)
T ss_dssp -SEEEESSS-----------EEEEEE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred EEEEEECCC-----------EEEEEEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence 655555433 67777778899999987653211100 11112456789988876
No 456
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=92.48 E-value=4 Score=31.56 Aligned_cols=102 Identities=12% Similarity=0.130 Sum_probs=67.4
Q ss_pred eEEEeeCCCeEEEEECC--CcceeeeeeeccccEEEEEEecCCCEEEEEeCCC------eEEEE---Ecc--CCce----
Q 019326 102 NLFSTSADGFVSIFDAD--PFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD------CLAMV---NLV--RGRR---- 164 (343)
Q Consensus 102 ~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~------~i~~w---d~~--~~~~---- 164 (343)
.|+.+...+.|.+|++. ..+.+.++.. -+.|..+.++..|+++++--.+. .+++| +.. ..++
T Consensus 30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vR 108 (215)
T PF14761_consen 30 ALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVR 108 (215)
T ss_pred eEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEE
Confidence 45555677789999987 3445566653 37899999999999999875432 45554 221 0111
Q ss_pred -------------------eEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEccccee
Q 019326 165 -------------------SFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKL 204 (343)
Q Consensus 165 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 204 (343)
+...+...++.+++..|-.-.++++.++.+.+|.+.....
T Consensus 109 iaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~~~l~lf~l~~~~~ 167 (215)
T PF14761_consen 109 IAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCGNKLVLFTLKYQTI 167 (215)
T ss_pred EcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcCCEEEEEEEEEEEE
Confidence 1122233566778888877778888888899998765443
No 457
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=92.22 E-value=5.3 Score=35.11 Aligned_cols=31 Identities=29% Similarity=0.500 Sum_probs=24.0
Q ss_pred ccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 254 ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 254 ~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
..|.+++..+... .+++.+.+|.|.+|++..
T Consensus 190 ~~I~~v~~d~~r~---------~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPSRR---------LLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp --EEEEEEETTTT---------EEEEEESSE-EEEEEE-S
T ss_pred hceeeEEecCCcC---------EEEEEeCCCcEEEEEEeC
Confidence 3488888887776 999999999999999975
No 458
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=92.19 E-value=4.1 Score=35.42 Aligned_cols=98 Identities=12% Similarity=0.112 Sum_probs=63.4
Q ss_pred eeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCC-----------
Q 019326 31 TLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNL----------- 97 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~----------- 97 (343)
+......+......+.+++.+ +.+.|+...-|.|.++|+.++..++.+++..+..+.=+........
T Consensus 296 ~l~~r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~ 375 (415)
T PF14655_consen 296 PLPMRFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSS 375 (415)
T ss_pred ccceEEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCC
Confidence 344555666666778888888 7777777778999999999998888887763333322222222100
Q ss_pred C--CCceEEEeeCCCeEEEEECCCcceeeeeee
Q 019326 98 S--VPRNLFSTSADGFVSIFDADPFVLLTSVKV 128 (343)
Q Consensus 98 ~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 128 (343)
. .--+++-+-.-|.|-||.++.+..+..+..
T Consensus 376 ~~~~l~LvIyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 376 SRFALFLVIYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred CcceEEEEEEeccCCeEEEEecCCCCEEEEEEe
Confidence 0 001334456678899999988877766653
No 459
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=92.08 E-value=0.87 Score=24.51 Aligned_cols=29 Identities=14% Similarity=0.388 Sum_probs=19.0
Q ss_pred CCCCEEEEE--eCCcEEEEEcccceeEEEec
Q 019326 181 GSGEKFFMV--TEEKVGIHQAEDAKLLCELD 209 (343)
Q Consensus 181 ~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~ 209 (343)
|++++++++ .++.|.++|..+++.+..+.
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~ 31 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIP 31 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEE
Confidence 455655555 56777777777776666655
No 460
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=91.75 E-value=7.3 Score=32.94 Aligned_cols=230 Identities=15% Similarity=0.103 Sum_probs=112.6
Q ss_pred eEEEEec-CceEEEeeCCCeEEEEEcCCCee---eeEe---ccCCCCCeEEEEEeCCCCCCCCceEEEeeC-C-------
Q 019326 45 ITTVAVS-GTAAASGGTDDTIHLYDLSTSSS---LGAI---HHHESSSVTSLAFYTPQNLSVPRNLFSTSA-D------- 109 (343)
Q Consensus 45 v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~---~~~~---~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-d------- 109 (343)
.++|+|. ...++++...|.|++++ ..+.. +..+ ..........++++|+- ....+|..... .
T Consensus 4 P~~~a~~pdG~l~v~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f--~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVAERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDF--ASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp EEEEEEETTSCEEEEETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTC--CCC-EEEEEEEEE-TSSSSE
T ss_pred ceEEEEeCCCcEEEEeCCceEEEEe-CCCcCcceecccccccccccCCcccceecccc--CCCCEEEEEEEcccCCCCCc
Confidence 5678887 34555567799999999 33433 2222 11225678999999951 00123333332 1
Q ss_pred -CeEEEEECCCc-------cee-eeeee---ccccEEEEEEecCCCEEEEEeCCCe-------------EEEEEccCCce
Q 019326 110 -GFVSIFDADPF-------VLL-TSVKV---HKKGVNDLAVHHSGKLALTVGRDDC-------------LAMVNLVRGRR 164 (343)
Q Consensus 110 -g~i~iwd~~~~-------~~~-~~~~~---~~~~v~~i~~~~~~~~l~~~~~d~~-------------i~~wd~~~~~~ 164 (343)
..|.-|..... +.+ ..+.. ....-..|+|.|+|.+.++.+..+. |.-.+.. ++.
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d-G~~ 159 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPD-GSI 159 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETT-SSB
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEeccc-CcC
Confidence 23444444322 111 11121 1234567999999977777665332 2222221 110
Q ss_pred -------------eEEEEcC-CcceEEEEeCC-CCEEEEE--eCCcEEEEEcccc-------------------------
Q 019326 165 -------------SFYHKIG-KEASLIKFDGS-GEKFFMV--TEEKVGIHQAEDA------------------------- 202 (343)
Q Consensus 165 -------------~~~~~~~-~~~~~~~~~~~-~~~~~~~--~~~~i~~~d~~~~------------------------- 202 (343)
....... .....++|+|. +.++++- .+..=.+.-+..+
T Consensus 160 p~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~~~ 239 (331)
T PF07995_consen 160 PADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAPSC 239 (331)
T ss_dssp -TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGSS-
T ss_pred CCCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCccccccCC
Confidence 0011111 22456899998 5444433 2222223222221
Q ss_pred ----eeEEEecCCcceEEeeec--------CCCeEEEEeCCCcEEEEECCCCceeE---EecccccccEEEEEEEecCCC
Q 019326 203 ----KLLCELDGKKRILCAAPG--------ENGVLFTGGEDRSITAWDTNSGKVAY---CIEDAHSARVKGIVVLTKNDG 267 (343)
Q Consensus 203 ----~~~~~~~~~~~i~~~~~~--------~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~ 267 (343)
.+...+.+...+..+.+. .+.++++.-..+.|....+..+..+. .+.......+..+++.|++.
T Consensus 240 ~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~- 318 (331)
T PF07995_consen 240 PGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGA- 318 (331)
T ss_dssp TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSE-
T ss_pred CCcCccceeecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCe-
Confidence 122233344556666654 23456655556788888876553332 22223455789999998876
Q ss_pred CCCCCCCeEEEEEcCCCcEE
Q 019326 268 GSTAENPYLVASASSDGVIC 287 (343)
Q Consensus 268 ~~~~~~~~~l~s~~~dg~i~ 287 (343)
++++-+.+|.|.
T Consensus 319 --------Lyv~~d~~G~iy 330 (331)
T PF07995_consen 319 --------LYVSDDSDGKIY 330 (331)
T ss_dssp --------EEEEE-TTTTEE
T ss_pred --------EEEEECCCCeEe
Confidence 777777788764
No 461
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=91.65 E-value=8.4 Score=33.46 Aligned_cols=145 Identities=10% Similarity=0.077 Sum_probs=84.4
Q ss_pred EEEEEEecCCCEEEEEeCCCeEEEEEccCCc-eeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccce-----eEE
Q 019326 133 VNDLAVHHSGKLALTVGRDDCLAMVNLVRGR-RSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAK-----LLC 206 (343)
Q Consensus 133 v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-----~~~ 206 (343)
...+...+++.+++.+..-..++-||--... ..........+..+.+.+++..++++..|.+.. ....++ ...
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G~l~~-S~d~G~~~~~~~f~ 319 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLTRGGGLYV-SKGTGLTEEDFDFE 319 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEeCCceEEE-ecCCCCccccccee
Confidence 3445667777766665544333344432111 222333345678889999999988886666544 333332 223
Q ss_pred EecC---CcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEec--ccccccEEEEEEEecCCCCCCCCCCeEEEEEc
Q 019326 207 ELDG---KKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE--DAHSARVKGIVVLTKNDGGSTAENPYLVASAS 281 (343)
Q Consensus 207 ~~~~---~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 281 (343)
.... ...+..+.+.+++.+++++..|.+..-. ..|+.-.... ..-......+.|.+++. ....+
T Consensus 320 ~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~----------g~~~G 388 (398)
T PLN00033 320 EADIKSRGFGILDVGYRSKKEAWAAGGSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKK----------GFVLG 388 (398)
T ss_pred ecccCCCCcceEEEEEcCCCcEEEEECCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCc----------eEEEe
Confidence 3332 2358888888777777777888776653 4454433332 12345678888877653 55666
Q ss_pred CCCcEEEE
Q 019326 282 SDGVICVW 289 (343)
Q Consensus 282 ~dg~i~vw 289 (343)
.+|.|.-|
T Consensus 389 ~~G~il~~ 396 (398)
T PLN00033 389 NDGVLLRY 396 (398)
T ss_pred CCcEEEEe
Confidence 78877654
No 462
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=91.52 E-value=11 Score=34.71 Aligned_cols=160 Identities=15% Similarity=0.168 Sum_probs=89.2
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc--eeeeeee-ccc------cEEEEEEecCCCEEEEEeC-C-
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV--LLTSVKV-HKK------GVNDLAVHHSGKLALTVGR-D- 151 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~-~~~------~v~~i~~~~~~~~l~~~~~-d- 151 (343)
...|-.+.|.+++ +.+++.-.+|.|.+||..... .+..+.. +.. -|..........++++.+. +
T Consensus 129 ~~kvv~Ik~~~~~-----~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~~ 203 (670)
T PF10395_consen 129 DDKVVGIKFSSDG-----KIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLSN 203 (670)
T ss_pred ccceEEEEEecCC-----CEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcCC
Confidence 4789999999887 799999999999999993222 1112221 111 1221111112244544444 2
Q ss_pred --CeEEEEEc--cCCceeEEE---EcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEecCC-------cceEEe
Q 019326 152 --DCLAMVNL--VRGRRSFYH---KIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGK-------KRILCA 217 (343)
Q Consensus 152 --~~i~~wd~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~i~~~ 217 (343)
-..+++.+ ......... ..........|.-....+..-.++.+.+|++.+.+..+++.-+ ..+.++
T Consensus 204 ~k~~ykL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~LY~l~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vSl 283 (670)
T PF10395_consen 204 SKLSYKLISLSNESSSIFELSSTILENFGLEDSKFCYQFGKLYQLSKKTISSYSIPNFQIQKTISLPSIIDKESDDLVSL 283 (670)
T ss_pred CcEEEEEEEeccCCcceEEeehheeccCCcccceEEEeCCEEEEEeCCEEEEEEcCCceEEEEEEechhhccccccceEe
Confidence 23567776 222211111 1112222233333333344448889999999998887777622 234455
Q ss_pred eec-CCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 218 APG-ENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 218 ~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
... +++.|++ .++.|++.|+.-...+.++.
T Consensus 284 ~~~s~nRvLLs--~~nkIyLld~~~~siLse~~ 314 (670)
T PF10395_consen 284 KPPSPNRVLLS--VNNKIYLLDLKFESILSEFE 314 (670)
T ss_pred ecCCCCeEEEE--cCCEEEEEeehhhhhhhhhh
Confidence 443 4555554 36789999997666555554
No 463
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=91.41 E-value=8.1 Score=38.00 Aligned_cols=70 Identities=17% Similarity=0.098 Sum_probs=40.8
Q ss_pred CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 210 GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 210 ~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
+..++.+..+....-++.+...+.+.+|+.........+. +.......++. .++++-.||.+.+|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~---------~~v~~h~Dgs~~fW 261 (993)
T KOG1983|consen 197 IEYESLQVLYYSPTKILIGFNRGLVVIKDRASKYVQSAYL------PNGQLESRDGS---------HFVSYHTDGSYAFW 261 (993)
T ss_pred cccccceeeeecCCCcceeeeeeeeeehhcccccchhhcc------cccccCccCCc---------eEEEEEecCCEEee
Confidence 3444555555433444455556666677655443333332 11111144444 99999999999999
Q ss_pred eccCc
Q 019326 290 DVRMA 294 (343)
Q Consensus 290 d~~~~ 294 (343)
|...+
T Consensus 262 d~s~g 266 (993)
T KOG1983|consen 262 DVSSG 266 (993)
T ss_pred ecCCC
Confidence 99986
No 464
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.36 E-value=7.4 Score=38.41 Aligned_cols=137 Identities=14% Similarity=0.177 Sum_probs=82.9
Q ss_pred EEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec----C------ceEEEeeCCCeEEEEEcCCCe
Q 019326 4 IAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS----G------TAAASGGTDDTIHLYDLSTSS 73 (343)
Q Consensus 4 ~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~------~~l~s~~~dg~i~iwd~~~~~ 73 (343)
+-.+.|+.+.+|+.+.. .....+.+-...|..+..- | ++++.-+.--.|.++-+.-.+
T Consensus 93 aWiTiDn~L~lWny~~~------------~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~ 160 (1311)
T KOG1900|consen 93 AWITIDNNLFLWNYESD------------NELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDE 160 (1311)
T ss_pred eEEEeCCeEEEEEcCCC------------CccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEecc
Confidence 44577999999999872 2233344445566666543 1 233333333446565432211
Q ss_pred e-------e--eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC----CCc---c-e--------------
Q 019326 74 S-------L--GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA----DPF---V-L-------------- 122 (343)
Q Consensus 74 ~-------~--~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~----~~~---~-~-------------- 122 (343)
. . ..+... ...|+|+....+| .++-++.||. +|.+ ..+ + +
T Consensus 161 ~~~~~~~f~~~~~i~~d-g~~V~~I~~t~nG------RIF~~G~dg~--lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lv 231 (1311)
T KOG1900|consen 161 FTGELSIFNTSFKISVD-GVSVNCITYTENG------RIFFAGRDGN--LYELVYQAEDGWFGSRCRKICLTKSVLSSLV 231 (1311)
T ss_pred ccCcccccccceeeecC-CceEEEEEeccCC------cEEEeecCCC--EEEEEEeccCchhhcccccccCchhHHHHhh
Confidence 1 1 122233 4678899977777 5666667774 4443 110 0 0
Q ss_pred --eeeee-eccccEEEEEEecCCCEEEEEeCCCeEEEEEccC
Q 019326 123 --LTSVK-VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR 161 (343)
Q Consensus 123 --~~~~~-~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~ 161 (343)
+..+. .+..+|..|+.......+.+-+..++|.+||+..
T Consensus 232 Ps~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 232 PSLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred hhhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 11222 4567999999998889999999999999999976
No 465
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=91.05 E-value=9.2 Score=32.77 Aligned_cols=186 Identities=20% Similarity=0.256 Sum_probs=108.1
Q ss_pred ceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEec----CCCE--EEEEe-CC---CeEEEEEccCCc-eeEEEE
Q 019326 101 RNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH----SGKL--ALTVG-RD---DCLAMVNLVRGR-RSFYHK 169 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~----~~~~--l~~~~-~d---~~i~~wd~~~~~-~~~~~~ 169 (343)
.+++....++-+.+||++. +.++.+. .+.++.+..-. +++. |+.++ .+ .+|++|.+.... .+....
T Consensus 69 SlIigTdK~~GL~VYdL~G-k~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v~ 145 (381)
T PF02333_consen 69 SLIIGTDKKGGLYVYDLDG-KELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDVT 145 (381)
T ss_dssp -EEEEEETTTEEEEEETTS--EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-C
T ss_pred ceEEEEeCCCCEEEEcCCC-cEEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceEcC
Confidence 5788888889999999976 4555553 23444444322 3322 33333 32 579999776321 222211
Q ss_pred --------cCCcceEEEE--eC-CCCEEEEE--eCCcEEEEEcc---c----ceeEEEecCCcceEEeeecC-CCeEEEE
Q 019326 170 --------IGKEASLIKF--DG-SGEKFFMV--TEEKVGIHQAE---D----AKLLCELDGKKRILCAAPGE-NGVLFTG 228 (343)
Q Consensus 170 --------~~~~~~~~~~--~~-~~~~~~~~--~~~~i~~~d~~---~----~~~~~~~~~~~~i~~~~~~~-~~~l~~~ 228 (343)
.-..+..+|+ ++ ++.+.+.. .+|.+..|.+. . ++.++++.....+..+...+ ...|+.|
T Consensus 146 ~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~LYvg 225 (381)
T PF02333_consen 146 DPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRLYVG 225 (381)
T ss_dssp BTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEEEEE
T ss_pred CCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCEEEe
Confidence 1123556665 33 45544444 67888888775 2 25678888778888888874 4699999
Q ss_pred eCCCcEEEEECCCC-----ceeEEecc-cccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 229 GEDRSITAWDTNSG-----KVAYCIED-AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 229 ~~dg~i~i~d~~~~-----~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
-++.-|.-|+.... +.+..... .....|..|++..... ..|++|+|.=.+++..||+.+..
T Consensus 226 EE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~-----g~gYLivSsQG~~sf~Vy~r~~~ 292 (381)
T PF02333_consen 226 EEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSD-----GKGYLIVSSQGDNSFAVYDREGP 292 (381)
T ss_dssp ETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CC-----C-EEEEEEEGGGTEEEEEESSTT
T ss_pred cCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCC-----CCeEEEEEcCCCCeEEEEecCCC
Confidence 99988888887522 22323321 2456889999886542 23456777777889999998864
No 466
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=90.95 E-value=6.2 Score=30.59 Aligned_cols=108 Identities=16% Similarity=0.161 Sum_probs=66.0
Q ss_pred EEEecC-ceEEEeeCCCeEEEEEcC--CCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC------eEEEE--
Q 019326 47 TVAVSG-TAAASGGTDDTIHLYDLS--TSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG------FVSIF-- 115 (343)
Q Consensus 47 ~l~~~~-~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg------~i~iw-- 115 (343)
.++-.| +.|+.+...+.|.+|++. ..+....|..- +.|..+.++..| ++|++--.+. .+++|
T Consensus 22 ~~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv--~~V~~l~y~~~G-----DYlvTlE~k~~~~~~~fvR~Y~N 94 (215)
T PF14761_consen 22 AVCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFSTV--GRVLQLVYSEAG-----DYLVTLEEKNKRSPVDFVRAYFN 94 (215)
T ss_pred eeeccCCceEEEEcCCCEEEEEEcccCCCceeEEEcch--hheeEEEecccc-----ceEEEEEeecCCccceEEEEEEE
Confidence 334444 666665667889999988 34566677665 889999999999 7898875532 45665
Q ss_pred -ECC--Ccceee-eeeec---------------------cccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 019326 116 -DAD--PFVLLT-SVKVH---------------------KKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG 162 (343)
Q Consensus 116 -d~~--~~~~~~-~~~~~---------------------~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~ 162 (343)
+.. ..+++. .+-+| ..++.+++..|-..-|+.|+ ++.+.+|.+...
T Consensus 95 Wr~~~~~~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~ 165 (215)
T PF14761_consen 95 WRSQKEENSPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQ 165 (215)
T ss_pred hhhhcccCCcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEE
Confidence 211 111111 11121 23566777777543444444 457888887644
No 467
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=90.89 E-value=8.8 Score=32.29 Aligned_cols=110 Identities=13% Similarity=0.081 Sum_probs=54.4
Q ss_pred EEEecCceEEEeeCC-----CeEEEEEcCCCeee---eEeccCCCCCe--EEEEEeCCCCCCCCceEEEeeC-----CCe
Q 019326 47 TVAVSGTAAASGGTD-----DTIHLYDLSTSSSL---GAIHHHESSSV--TSLAFYTPQNLSVPRNLFSTSA-----DGF 111 (343)
Q Consensus 47 ~l~~~~~~l~s~~~d-----g~i~iwd~~~~~~~---~~~~~~~~~~v--~~l~~~~~~~~~~~~~l~s~~~-----dg~ 111 (343)
+++..+.+++.|+.+ ..+..+|+.+.+.. ..+..- ..+. .+++.. ++ +..+.|+. ...
T Consensus 68 ~~~~~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~l-p~~~~~~~~~~~-~~-----~iYv~GG~~~~~~~~~ 140 (323)
T TIGR03548 68 SVSVENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNL-PFTFENGSACYK-DG-----TLYVGGGNRNGKPSNK 140 (323)
T ss_pred EEEECCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCC-CcCccCceEEEE-CC-----EEEEEeCcCCCccCce
Confidence 344446666777754 34667777665431 122111 1111 122333 33 46666664 246
Q ss_pred EEEEECCCcc--eeeeeeeccccEEEEEEecCCCEEEEEeCCC----eEEEEEccCCce
Q 019326 112 VSIFDADPFV--LLTSVKVHKKGVNDLAVHHSGKLALTVGRDD----CLAMVNLVRGRR 164 (343)
Q Consensus 112 i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~----~i~~wd~~~~~~ 164 (343)
+..||+.+.+ .+..+... ......+...++++.+.|+.++ .+..||.++.+-
T Consensus 141 v~~yd~~~~~W~~~~~~p~~-~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W 198 (323)
T TIGR03548 141 SYLFNLETQEWFELPDFPGE-PRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQW 198 (323)
T ss_pred EEEEcCCCCCeeECCCCCCC-CCCcceEEEECCEEEEEcCCCCccccceEEEecCCCee
Confidence 8888876533 22222211 1112222334566777777653 256788887654
No 468
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=90.89 E-value=0.75 Score=23.22 Aligned_cols=27 Identities=22% Similarity=0.625 Sum_probs=21.4
Q ss_pred CCeEEEEeCCCcEEEEECCCCceeEEe
Q 019326 222 NGVLFTGGEDRSITAWDTNSGKVAYCI 248 (343)
Q Consensus 222 ~~~l~~~~~dg~i~i~d~~~~~~~~~~ 248 (343)
++.+++++.+|.+..+|..+|+.+.++
T Consensus 6 ~~~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 6 DGTVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred CCEEEEEcCCCEEEEEEcccCcEEEEc
Confidence 446778888899999999888877654
No 469
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=90.83 E-value=8.2 Score=34.19 Aligned_cols=27 Identities=15% Similarity=0.197 Sum_probs=21.8
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 132 GVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
.|..+..++.|..++..+.+|.+.++=
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeL 131 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMEL 131 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEc
Confidence 567788899999999999999776654
No 470
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.58 E-value=11 Score=32.84 Aligned_cols=151 Identities=6% Similarity=-0.004 Sum_probs=87.0
Q ss_pred eEEEEec-CceEEEeeCCCeEEEEEcCCC--eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc
Q 019326 45 ITTVAVS-GTAAASGGTDDTIHLYDLSTS--SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV 121 (343)
Q Consensus 45 v~~l~~~-~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 121 (343)
-+.+-|+ .+..+-+-..|.+.=|-+... ...-.+.-...++|.++.|+++. +.++.--.+++|.+++....+
T Consensus 25 sngvFfDDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDn-----kilAVQR~~~~v~f~nf~~d~ 99 (657)
T KOG2377|consen 25 SNGVFFDDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDN-----KILAVQRTSKTVDFCNFIPDN 99 (657)
T ss_pred ccceeeccCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCc-----ceEEEEecCceEEEEecCCCc
Confidence 3445566 333333344455666655432 22334433336899999999998 789998999999999984333
Q ss_pred ee----eeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc--eeEEEEcCCcceEEEEeCCCCEEEEE---eCC
Q 019326 122 LL----TSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR--RSFYHKIGKEASLIKFDGSGEKFFMV---TEE 192 (343)
Q Consensus 122 ~~----~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 192 (343)
.. .+.+..+..|....|..+ ..++.....| +-+|.....+ ......+...+.-..|.++.+.++.+ ..+
T Consensus 100 ~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n 177 (657)
T KOG2377|consen 100 SQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLEN 177 (657)
T ss_pred hhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeecccccc
Confidence 22 223333456888999876 4455555444 4555443222 22222334556667777877766555 234
Q ss_pred cEEEEEcccc
Q 019326 193 KVGIHQAEDA 202 (343)
Q Consensus 193 ~i~~~d~~~~ 202 (343)
.+.-+.++++
T Consensus 178 ~lnpf~~~~~ 187 (657)
T KOG2377|consen 178 VLNPFHFRAG 187 (657)
T ss_pred ccccEEEeec
Confidence 4444444443
No 471
>PRK10115 protease 2; Provisional
Probab=90.55 E-value=16 Score=34.59 Aligned_cols=187 Identities=6% Similarity=-0.053 Sum_probs=93.8
Q ss_pred eEEEEec--CceEEEeeC-----CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-C-----Ce
Q 019326 45 ITTVAVS--GTAAASGGT-----DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-D-----GF 111 (343)
Q Consensus 45 v~~l~~~--~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-d-----g~ 111 (343)
+..+.++ +++|+.+.. .-.|++.|+.+++.+...... .. ..++|.+++ +.|+.... + ..
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~--~~-~~~~w~~D~-----~~~~y~~~~~~~~~~~~ 200 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN--VE-PSFVWANDS-----WTFYYVRKHPVTLLPYQ 200 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC--cc-eEEEEeeCC-----CEEEEEEecCCCCCCCE
Confidence 4455666 666665422 235888899888644322222 12 469999988 44444333 2 36
Q ss_pred EEEEECCCc--ceeeeeeeccccEE-EEEEecCCCEEEEEeC---CCeEEEEEcc--CCceeEEEEcCCcceEEEEeCCC
Q 019326 112 VSIFDADPF--VLLTSVKVHKKGVN-DLAVHHSGKLALTVGR---DDCLAMVNLV--RGRRSFYHKIGKEASLIKFDGSG 183 (343)
Q Consensus 112 i~iwd~~~~--~~~~~~~~~~~~v~-~i~~~~~~~~l~~~~~---d~~i~~wd~~--~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
|+.+++.++ +-...+........ .+..+.++++++..+. ++.+.+++.. .+..............-..+..+
T Consensus 201 v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (686)
T PRK10115 201 VWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQH 280 (686)
T ss_pred EEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEEeCCC
Confidence 788888776 33333443233233 2333447776655444 3568888843 33322233333332222223333
Q ss_pred CEEEEEe--CCc--EEEEEccc-ceeEEEecC--CcceEEeeecCCCeEEEEeCCCcEEEEEC
Q 019326 184 EKFFMVT--EEK--VGIHQAED-AKLLCELDG--KKRILCAAPGENGVLFTGGEDRSITAWDT 239 (343)
Q Consensus 184 ~~~~~~~--~~~--i~~~d~~~-~~~~~~~~~--~~~i~~~~~~~~~~l~~~~~dg~i~i~d~ 239 (343)
.+++... ... +...++.+ ++....+.+ ...+..+.+..+.++++...+|.-+++-+
T Consensus 281 ~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~ 343 (686)
T PRK10115 281 RFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQI 343 (686)
T ss_pred EEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEE
Confidence 3333332 123 33334432 222223333 23677777766667777777777555543
No 472
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=90.30 E-value=3.6 Score=37.57 Aligned_cols=72 Identities=21% Similarity=0.155 Sum_probs=44.1
Q ss_pred cCceEEEeeCCCeEEEEEcCC----CeeeeEe-----------cc----------CCCCCeEEEEEeC----CCCCCCCc
Q 019326 51 SGTAAASGGTDDTIHLYDLST----SSSLGAI-----------HH----------HESSSVTSLAFYT----PQNLSVPR 101 (343)
Q Consensus 51 ~~~~l~s~~~dg~i~iwd~~~----~~~~~~~-----------~~----------~~~~~v~~l~~~~----~~~~~~~~ 101 (343)
+...++.+..||.+....... +...... .+ ........++++. +. .
T Consensus 157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 231 (547)
T PF11715_consen 157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDD-----T 231 (547)
T ss_dssp SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETT-----T
T ss_pred CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCC-----C
Confidence 567788888899888877664 1111111 00 0023455566655 33 6
Q ss_pred eEEEeeCCCeEEEEECCCcceeeeee
Q 019326 102 NLFSTSADGFVSIFDADPFVLLTSVK 127 (343)
Q Consensus 102 ~l~s~~~dg~i~iwd~~~~~~~~~~~ 127 (343)
++++.+.|+++++||+.+++++.+..
T Consensus 232 ~l~tl~~D~~LRiW~l~t~~~~~~~~ 257 (547)
T PF11715_consen 232 FLFTLSRDHTLRIWSLETGQCLATID 257 (547)
T ss_dssp EEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCeEEEEec
Confidence 99999999999999999999866553
No 473
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=90.18 E-value=3.3 Score=37.83 Aligned_cols=70 Identities=19% Similarity=0.158 Sum_probs=43.5
Q ss_pred ceEEEeeCCCeEEEEECCC----cceeeee-e---------------------eccccEEEEEEec----CCCEEEEEeC
Q 019326 101 RNLFSTSADGFVSIFDADP----FVLLTSV-K---------------------VHKKGVNDLAVHH----SGKLALTVGR 150 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~----~~~~~~~-~---------------------~~~~~v~~i~~~~----~~~~l~~~~~ 150 (343)
..++.+..||.+....... +...... . .....+..++.+. +..++++.+.
T Consensus 159 ~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl~~ 238 (547)
T PF11715_consen 159 ANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTLSR 238 (547)
T ss_dssp SBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEEET
T ss_pred CEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEEeC
Confidence 5788888999888877643 1111110 0 0123455666666 6689999999
Q ss_pred CCeEEEEEccCCceeEEEEc
Q 019326 151 DDCLAMVNLVRGRRSFYHKI 170 (343)
Q Consensus 151 d~~i~~wd~~~~~~~~~~~~ 170 (343)
|+++++||+.+++++.....
T Consensus 239 D~~LRiW~l~t~~~~~~~~~ 258 (547)
T PF11715_consen 239 DHTLRIWSLETGQCLATIDL 258 (547)
T ss_dssp TSEEEEEETTTTCEEEEEET
T ss_pred CCeEEEEECCCCeEEEEecc
Confidence 99999999999998665433
No 474
>PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others. It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas [].
Probab=90.11 E-value=23 Score=36.39 Aligned_cols=166 Identities=10% Similarity=0.024 Sum_probs=96.9
Q ss_pred EeCCCeEEEEEccCCceeE-----------------EEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcc----cceeEE
Q 019326 148 VGRDDCLAMVNLVRGRRSF-----------------YHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAE----DAKLLC 206 (343)
Q Consensus 148 ~~~d~~i~~wd~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~----~~~~~~ 206 (343)
+-.||.|..||-.+..... ..-..+.+..+.+++....++-+.+..+.+=-.+ -+..+.
T Consensus 619 ~L~~G~i~~wD~ttq~W~~~~~kd~~~L~RG~D~~AYVLk~G~vk~l~i~~~~~~~~~g~~~~~a~~~~r~~~e~G~~l~ 698 (1774)
T PF11725_consen 619 GLQDGKIQYWDSTTQCWKDAGVKDIDQLKRGLDGNAYVLKDGKVKRLSINQEHPSIAHGDNNVFALPQRRNKVELGDALE 698 (1774)
T ss_pred eeccceEeeecCcchhhhhccCcCHHHHhccccCCceEecCCceeeeecccCCCccccCCCcccccccccCCCCCCcccc
Confidence 4457999999976543110 1112345666666666555555444433321111 123333
Q ss_pred EecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcE
Q 019326 207 ELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVI 286 (343)
Q Consensus 207 ~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i 286 (343)
-+. ...|+.++.-+++.+++-+..|.+..+. ..+.++.--..+-.+.|..|++.... -|.+...+|.+
T Consensus 699 Gl~-~~~i~a~Avv~~~~fvald~qg~lt~h~-k~g~p~~l~~~gl~G~ik~l~lD~~~----------nL~Alt~~G~L 766 (1774)
T PF11725_consen 699 GLE-DRVITAFAVVNDNKFVALDDQGDLTAHQ-KPGRPVPLSRPGLSGEIKDLALDEKQ----------NLYALTSTGEL 766 (1774)
T ss_pred CCC-cCcceeEEEEcCCceEEeccCCcccccc-CCCCCccCCCCCCCcchhheeecccc----------ceeEecCCCce
Confidence 333 5668888888888899999999999998 66664433222556899999998876 47777788887
Q ss_pred EEEeccCccccCCC-------cccccccccceeEEEcCCCCceecc
Q 019326 287 CVWDVRMAIKEKPL-------PLAEAKTNSRLTCLAGSSTKSFKRP 325 (343)
Q Consensus 287 ~vwd~~~~~~~~~~-------~~~~~~~~~~i~~~~~s~~~~~~~~ 325 (343)
+--+-+........ .-.......+|.++....+..+.+.
T Consensus 767 f~~~k~~WQ~~~~~~~~~~~W~~v~lP~~~~v~~l~~~~~~~l~~~ 812 (1774)
T PF11725_consen 767 FRLPKEAWQGNAEGDQMAAKWQKVALPDEQPVKSLRTNDDNHLSAQ 812 (1774)
T ss_pred eecCHHHhhCcccCCccccCceeccCCCCCchhhhhcCCCCceEEE
Confidence 76443332111111 1112234456777766666665543
No 475
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=89.94 E-value=1.2 Score=23.62 Aligned_cols=26 Identities=27% Similarity=0.487 Sum_probs=23.0
Q ss_pred eEEEEeCCCcEEEEECCCCceeEEec
Q 019326 224 VLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 224 ~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
.++.++.+|.|+-+|.++|+.+..+.
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~ 27 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQ 27 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeee
Confidence 46677999999999999999998887
No 476
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=89.89 E-value=3.2 Score=35.87 Aligned_cols=104 Identities=15% Similarity=0.162 Sum_probs=72.9
Q ss_pred ceEEEeeCCCeEEEE-ECCC-cc----eeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcc
Q 019326 101 RNLFSTSADGFVSIF-DADP-FV----LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEA 174 (343)
Q Consensus 101 ~~l~s~~~dg~i~iw-d~~~-~~----~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 174 (343)
.-++.++.||.|.-| |.+. +. .++.++....++..+.-..+.+-+++-+..|++..+.....+.+.....-..+
T Consensus 281 ~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~ 360 (733)
T COG4590 281 FSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAP 360 (733)
T ss_pred eeEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCc
Confidence 568888999998877 4322 22 22222322334444444444567888888999998887666666555556678
Q ss_pred eEEEEeCCCCEEEEEeCCcEEEEEccccee
Q 019326 175 SLIKFDGSGEKFFMVTEEKVGIHQAEDAKL 204 (343)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 204 (343)
..++++|.+.+++.-..++++++.+++..+
T Consensus 361 ~~~~~Sp~~~~Ll~e~~gki~~~~l~Nr~P 390 (733)
T COG4590 361 QLVAMSPNQAYLLSEDQGKIRLAQLENRNP 390 (733)
T ss_pred ceeeeCcccchheeecCCceEEEEecCCCC
Confidence 889999999999999999999998877543
No 477
>KOG3522 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=89.33 E-value=5 Score=37.49 Aligned_cols=146 Identities=15% Similarity=0.148 Sum_probs=92.7
Q ss_pred eEEEeeCCCeEEEEEcCCC---eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC-----cceeee
Q 019326 54 AAASGGTDDTIHLYDLSTS---SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP-----FVLLTS 125 (343)
Q Consensus 54 ~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----~~~~~~ 125 (343)
.+..|+.++.|-++.-..+ +....+...+...+.++.+++.. +..|.-||++-.|-... +++-..
T Consensus 549 Tic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss~S-------lgagl~dgt~a~y~rap~gSwd~ep~~~ 621 (925)
T KOG3522|consen 549 TICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSSGS-------LGAGLIDGTLAVYGRAPSGSWDGEPNIS 621 (925)
T ss_pred cccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhccccc-------cccCccCCccccccCCCCCCCCCCCccc
Confidence 4677888888888876522 12222222225778888887654 67777788776654321 112222
Q ss_pred eeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEE----EEcCCcceEEEEeCCCCEEEEEeCCcEEEEEccc
Q 019326 126 VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFY----HKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAED 201 (343)
Q Consensus 126 ~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 201 (343)
+.....+|.+.++..+ ++.++.+|.+.++...+...... ......|+.+....++-+++.+....+++++..+
T Consensus 622 ~~~g~lPvrsla~~ed---~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~~~rlfhtet 698 (925)
T KOG3522|consen 622 IPTGSLPVRSLAFQED---FVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGDEERLFHTET 698 (925)
T ss_pred cccCCccccchhhhhc---eeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCCEEEEecccc
Confidence 2333457888887765 56778899999998877554332 2344678888888777777777777777777666
Q ss_pred ceeEEEec
Q 019326 202 AKLLCELD 209 (343)
Q Consensus 202 ~~~~~~~~ 209 (343)
....+.+.
T Consensus 699 l~hlqd~n 706 (925)
T KOG3522|consen 699 LWHLQDSN 706 (925)
T ss_pred cCCccccc
Confidence 55444443
No 478
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=89.29 E-value=1.2 Score=23.86 Aligned_cols=21 Identities=24% Similarity=0.482 Sum_probs=16.5
Q ss_pred CCCeEEEEeCCCcEEEEECCC
Q 019326 221 ENGVLFTGGEDRSITAWDTNS 241 (343)
Q Consensus 221 ~~~~l~~~~~dg~i~i~d~~~ 241 (343)
.++.++.++.||.++.+|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 567899999999999999764
No 479
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=89.21 E-value=1.2 Score=21.55 Aligned_cols=26 Identities=12% Similarity=0.262 Sum_probs=22.3
Q ss_pred CCeEEEEecCceEEEeeCCCeEEEEE
Q 019326 43 SPITTVAVSGTAAASGGTDDTIHLYD 68 (343)
Q Consensus 43 ~~v~~l~~~~~~l~s~~~dg~i~iwd 68 (343)
..|.+++....+++.+...+.+|+|.
T Consensus 2 E~i~aia~g~~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 2 EEIEAIAAGDSWVAVATSAGYLRIFS 27 (27)
T ss_pred ceEEEEEccCCEEEEEeCCCeEEecC
Confidence 35788898889999999999999984
No 480
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=89.08 E-value=4 Score=37.69 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=44.3
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
...++++.-+|.+ +.++.++.||.|++|+....+...... ...+-..+.|...| |++...|..+.-|.
T Consensus 14 ~e~~~aiqshp~~-----~s~v~~~~d~si~lfn~~~r~qski~~-~~~p~~nlv~tnhg--l~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 14 DEFTTAIQSHPGG-----QSFVLAHQDGSIILFNFIPRRQSKICE-EAKPKENLVFTNHG--LVTATSDRRALAWK 81 (1636)
T ss_pred cceeeeeeecCCC-----ceEEEEecCCcEEEEeecccchhhhhh-hcCCccceeeeccc--eEEEeccchhheee
Confidence 3567788888988 789999999999999986544322211 12233345555443 56666677676665
No 481
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=88.62 E-value=11 Score=30.12 Aligned_cols=139 Identities=12% Similarity=0.040 Sum_probs=73.6
Q ss_pred EEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-C--CeEEEEECCCcceeeeee------eccccEE
Q 019326 64 IHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-D--GFVSIFDADPFVLLTSVK------VHKKGVN 134 (343)
Q Consensus 64 i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-d--g~i~iwd~~~~~~~~~~~------~~~~~v~ 134 (343)
-.+||+.+++... +....+.-..+-.+.++| ++|.+|+. + ..+++++.........+. .....--
T Consensus 48 s~~yD~~tn~~rp-l~v~td~FCSgg~~L~dG-----~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYp 121 (243)
T PF07250_consen 48 SVEYDPNTNTFRP-LTVQTDTFCSGGAFLPDG-----RLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYP 121 (243)
T ss_pred EEEEecCCCcEEe-ccCCCCCcccCcCCCCCC-----CEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccc
Confidence 4588988875433 222213334444677888 78888876 2 357788764311011111 1122233
Q ss_pred EEEEecCCCEEEEEeCCCe-EEEEEccCC-ceeEEEEcC---------CcceEEEEeCCCCEEEEEeCCcEEEEEcccce
Q 019326 135 DLAVHHSGKLALTVGRDDC-LAMVNLVRG-RRSFYHKIG---------KEASLIKFDGSGEKFFMVTEEKVGIHQAEDAK 203 (343)
Q Consensus 135 ~i~~~~~~~~l~~~~~d~~-i~~wd~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 203 (343)
+....|||+.|+.|+.... ..+|.-+.. ........- .--..+.+.|+|+.|+.+.. .-.+||..+.+
T Consensus 122 T~~~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~-~s~i~d~~~n~ 200 (243)
T PF07250_consen 122 TATTLPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANR-GSIIYDYKTNT 200 (243)
T ss_pred cceECCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcC-CcEEEeCCCCe
Confidence 4455679999999988743 344443211 111111110 11123666788888877743 34566877777
Q ss_pred eEEEec
Q 019326 204 LLCELD 209 (343)
Q Consensus 204 ~~~~~~ 209 (343)
.++.++
T Consensus 201 v~~~lP 206 (243)
T PF07250_consen 201 VVRTLP 206 (243)
T ss_pred EEeeCC
Confidence 666655
No 482
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=88.34 E-value=1.6 Score=21.97 Aligned_cols=27 Identities=26% Similarity=0.218 Sum_probs=22.4
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
+..++.++.+|.+..+|.++|+.+..+
T Consensus 6 ~~~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 6 DGTVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred CCEEEEEcCCCEEEEEEcccCcEEEEc
Confidence 446888899999999999999887654
No 483
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=88.10 E-value=16 Score=31.42 Aligned_cols=99 Identities=13% Similarity=0.091 Sum_probs=53.0
Q ss_pred CCeEEEEEeCCCCCCCCceEEEee-----------CCC-eEEEEECCC--cc--eeeeeeeccccEEEEEEecCCCEEEE
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTS-----------ADG-FVSIFDADP--FV--LLTSVKVHKKGVNDLAVHHSGKLALT 147 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~-----------~dg-~i~iwd~~~--~~--~~~~~~~~~~~v~~i~~~~~~~~l~~ 147 (343)
.....|+|.+++ +++++-. ..+ .|.+++-.. ++ ....+.........+++.+++ +++
T Consensus 14 ~~P~~ia~d~~G-----~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV- 86 (367)
T TIGR02604 14 RNPIAVCFDERG-----RLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV- 86 (367)
T ss_pred CCCceeeECCCC-----CEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-
Confidence 445678898888 4444432 223 677776432 22 223333333456889999888 444
Q ss_pred EeCCCeEEEEEccCC-----c-eeEEEEc-------CCcceEEEEeCCCCEEEEE
Q 019326 148 VGRDDCLAMVNLVRG-----R-RSFYHKI-------GKEASLIKFDGSGEKFFMV 189 (343)
Q Consensus 148 ~~~d~~i~~wd~~~~-----~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 189 (343)
+......++.|.... + .+..... .+....+.+.|+|.+.++.
T Consensus 87 ~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~ 141 (367)
T TIGR02604 87 ATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNH 141 (367)
T ss_pred eCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEec
Confidence 444443334344321 1 1111112 2336679999999866654
No 484
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=87.80 E-value=14 Score=30.34 Aligned_cols=111 Identities=14% Similarity=0.030 Sum_probs=0.0
Q ss_pred EEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee------CCCeEEEEECCCcceeeeeeecc-----cc
Q 019326 64 IHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS------ADGFVSIFDADPFVLLTSVKVHK-----KG 132 (343)
Q Consensus 64 i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~-----~~ 132 (343)
|++||..+.+-...-.+- .+.|++|.|..+. +++++|. ....+..||..+ +....+..-. ++
T Consensus 18 lC~yd~~~~qW~~~g~~i-~G~V~~l~~~~~~-----~Llv~G~ft~~~~~~~~la~yd~~~-~~w~~~~~~~s~~ipgp 90 (281)
T PF12768_consen 18 LCLYDTDNSQWSSPGNGI-SGTVTDLQWASNN-----QLLVGGNFTLNGTNSSNLATYDFKN-QTWSSLGGGSSNSIPGP 90 (281)
T ss_pred EEEEECCCCEeecCCCCc-eEEEEEEEEecCC-----EEEEEEeeEECCCCceeEEEEecCC-CeeeecCCcccccCCCc
Q ss_pred EEEEEEecCCCEEEE-----EeCCCeEEEEEccCCceeEE--EEcCCcceEEEEeC
Q 019326 133 VNDLAVHHSGKLALT-----VGRDDCLAMVNLVRGRRSFY--HKIGKEASLIKFDG 181 (343)
Q Consensus 133 v~~i~~~~~~~~l~~-----~~~d~~i~~wd~~~~~~~~~--~~~~~~~~~~~~~~ 181 (343)
|..+.+..+...=+. ...+..|..||-.+-..+.. ......+..+.+-|
T Consensus 91 v~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~~~ 146 (281)
T PF12768_consen 91 VTALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQVLP 146 (281)
T ss_pred EEEEEeeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEEEe
No 485
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=87.76 E-value=6 Score=29.76 Aligned_cols=31 Identities=19% Similarity=0.093 Sum_probs=25.8
Q ss_pred ccEEEEEEecCC------CEEEEEeCCCeEEEEEccC
Q 019326 131 KGVNDLAVHHSG------KLALTVGRDDCLAMVNLVR 161 (343)
Q Consensus 131 ~~v~~i~~~~~~------~~l~~~~~d~~i~~wd~~~ 161 (343)
..+..++|+|.| .+|++...++.|.+|....
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 378999999954 5788889999999998653
No 486
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=87.59 E-value=21 Score=32.09 Aligned_cols=174 Identities=12% Similarity=-0.002 Sum_probs=0.0
Q ss_pred eEEEe---eCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecc
Q 019326 54 AAASG---GTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHK 130 (343)
Q Consensus 54 ~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 130 (343)
++++. ...+...+.|.+ |...+.+... ......+...+++ .+++... ..+..+|+.. +.+..+....
T Consensus 117 ~~~~~~~~~~~~~~~~iD~~-G~Vrw~~~~~-~~~~~~~~~l~nG-----~ll~~~~--~~~~e~D~~G-~v~~~~~l~~ 186 (477)
T PF05935_consen 117 YFVNGNDWDSSSYTYLIDNN-GDVRWYLPLD-SGSDNSFKQLPNG-----NLLIGSG--NRLYEIDLLG-KVIWEYDLPG 186 (477)
T ss_dssp EEEEETT--BEEEEEEEETT-S-EEEEE-GG-GT--SSEEE-TTS------EEEEEB--TEEEEE-TT---EEEEEE--T
T ss_pred EEEeCCCCCCCceEEEECCC-ccEEEEEccC-ccccceeeEcCCC-----CEEEecC--CceEEEcCCC-CEEEeeecCC
Q ss_pred cc---EEEEEEecCCCEEEEEeC-------------CCeEEEEEccCCceeEEEEcCCcc--------------------
Q 019326 131 KG---VNDLAVHHSGKLALTVGR-------------DDCLAMVNLVRGRRSFYHKIGKEA-------------------- 174 (343)
Q Consensus 131 ~~---v~~i~~~~~~~~l~~~~~-------------d~~i~~wd~~~~~~~~~~~~~~~~-------------------- 174 (343)
.. -..+...|+|++|+.+.. ...|..+| .+|+.+.........
T Consensus 187 ~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~ 265 (477)
T PF05935_consen 187 GYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSG 265 (477)
T ss_dssp TEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SS
T ss_pred cccccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCC
Q ss_pred --------eEEEEeC-CCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEE-----------------------eeecC
Q 019326 175 --------SLIKFDG-SGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILC-----------------------AAPGE 221 (343)
Q Consensus 175 --------~~~~~~~-~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~-----------------------~~~~~ 221 (343)
+++.+.+ ++.+++++ ....|...|.++++....+..+..... ..+..
T Consensus 266 ~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~~w~~~~~~~ll~~vd~~G~~~~~~~~~~~~~~ 345 (477)
T PF05935_consen 266 GGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPPGGWNGTYQDYLLTPVDSNGNPIDCGDGDFDWFW 345 (477)
T ss_dssp TTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-STT--TTTGGGB-EEB-TTS-B-EBSSSS----S
T ss_pred CCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCCCCCCcccchheeeeeccCCceeeccCCCCcccc
Q ss_pred CCeEEEEeCCC---cEEEEE
Q 019326 222 NGVLFTGGEDR---SITAWD 238 (343)
Q Consensus 222 ~~~l~~~~~dg---~i~i~d 238 (343)
+++-+.--.+| .|.+||
T Consensus 346 gQH~~~~~~~g~~~~l~vFD 365 (477)
T PF05935_consen 346 GQHTAHLIPDGPQGNLLVFD 365 (477)
T ss_dssp S-EEEEE-TTS---SEEEEE
T ss_pred cccceEEcCCCCeEEEEEEE
No 487
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=87.30 E-value=2 Score=22.73 Aligned_cols=28 Identities=18% Similarity=0.120 Sum_probs=23.8
Q ss_pred eEEEeeCCCeEEEEEcCCCeeeeEeccC
Q 019326 54 AAASGGTDDTIHLYDLSTSSSLGAIHHH 81 (343)
Q Consensus 54 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 81 (343)
.++.++.+|.|.-.|.++|+.+..++..
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~ 29 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQTG 29 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEESS
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeCC
Confidence 4566799999999999999999988654
No 488
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=87.30 E-value=14 Score=29.84 Aligned_cols=135 Identities=12% Similarity=0.017 Sum_probs=80.3
Q ss_pred CCeEEEEEeCCCCCCCCceEEEee---CCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE-c
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTS---ADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN-L 159 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd-~ 159 (343)
..+.+.++++++ +.++... ....++++... ....... ....+..-.|++++...+....+...+++. .
T Consensus 24 ~~~~s~AvS~dg-----~~~A~v~~~~~~~~L~~~~~~--~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~ 95 (253)
T PF10647_consen 24 YDVTSPAVSPDG-----SRVAAVSEGDGGRSLYVGPAG--GPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDS 95 (253)
T ss_pred ccccceEECCCC-----CeEEEEEEcCCCCEEEEEcCC--Ccceeec-cCCccccccccCCCCEEEEEcCCCceEEEEec
Confidence 378899999999 5555544 33355555443 2222222 233677788999987766666666666663 3
Q ss_pred cCCcee-EEEEcC---CcceEEEEeCCCCEEEEEe----CCcEEEEEcc---cc--e----eEEEec-CCcceEEeeecC
Q 019326 160 VRGRRS-FYHKIG---KEASLIKFDGSGEKFFMVT----EEKVGIHQAE---DA--K----LLCELD-GKKRILCAAPGE 221 (343)
Q Consensus 160 ~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~i~~~d~~---~~--~----~~~~~~-~~~~i~~~~~~~ 221 (343)
..+... ...... ..|..+.++|+|.+++... ++.+.+--+. .+ . ...... ....+..+.|.+
T Consensus 96 ~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~ 175 (253)
T PF10647_consen 96 ASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSD 175 (253)
T ss_pred CCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecC
Confidence 333321 111111 2799999999999998884 6677766543 22 0 111111 246788999986
Q ss_pred CCeEE
Q 019326 222 NGVLF 226 (343)
Q Consensus 222 ~~~l~ 226 (343)
+..|+
T Consensus 176 ~~~L~ 180 (253)
T PF10647_consen 176 DSTLV 180 (253)
T ss_pred CCEEE
Confidence 55333
No 489
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=87.27 E-value=11 Score=30.36 Aligned_cols=75 Identities=16% Similarity=0.173 Sum_probs=51.2
Q ss_pred CCCeEEEEEeCCCCCC--CCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEE---EecCCCEEEEEeCCCeEEEE
Q 019326 83 SSSVTSLAFYTPQNLS--VPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLA---VHHSGKLALTVGRDDCLAMV 157 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~---~~~~~~~l~~~~~d~~i~~w 157 (343)
...|+|++--...... ....|+.|.++|.|.|.|......+..++...-++.-.+ |..-...++++++||.|++.
T Consensus 176 ~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devdyRI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 176 QTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVDYRIVVACRDGKIYTI 255 (257)
T ss_pred CceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccceEEEEEeCCCEEEEE
Confidence 4678888765443221 346899999999999999998888887775555443222 22123467888889988764
No 490
>KOG2063 consensus Vacuolar assembly/sorting proteins VPS39/VAM6/VPS3 [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.27 E-value=29 Score=33.47 Aligned_cols=244 Identities=11% Similarity=0.037 Sum_probs=0.0
Q ss_pred CCCeE-EEEecCceEEEeeCCCeEEEEEcCCCeeeeEecc-----------CCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 42 LSPIT-TVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHH-----------HESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 42 ~~~v~-~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----------~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
...|. |++-.++.++.|+.+|.+.+|.+........... + ..+|..+...+.- .++-.-.|
T Consensus 15 ~~~vd~~va~~~~~l~vGt~~G~L~lY~i~~~~~~~~~~~~~~~~~~~~~~~-kk~i~~l~~~~~~------~~ll~l~d 87 (877)
T KOG2063|consen 15 PLEVDLCVAAYGNHLYVGTRDGDLYLYSIYERGNPESVELVTETVKFEKEFS-KKPINKLLVCASL------ELLLILSD 87 (877)
T ss_pred CCccchHHHHhCCEEEEEcCCCcEEEEeccccccccchhhhcchhHHhhhhc-cchhHHHhhcchh------cchheecC
Q ss_pred CeEEEEECCCcceeeeeeeccccEEEEEEecC---C--CEEEEEe-CCCeEEEEEccCCceeEEEEcCCcceEEEEeCCC
Q 019326 110 GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHS---G--KLALTVG-RDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSG 183 (343)
Q Consensus 110 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~---~--~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
+.|.++++.+.+.......-.+.......... + .+.++.+ ....+.+.-.............-+....+..-.+
T Consensus 88 sqi~~~~l~~~~~~~~~~~~Kg~~~f~~~~~~~s~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 167 (877)
T KOG2063|consen 88 SQIAVHKLPELEPVPSGTRLKGASLFTIDLRPISTGPSVYEICLSVRKRLIRFFWNGRDGIVLVKELGFPDVPKARAWCG 167 (877)
T ss_pred CcceeeecCcccccccccccccceeeccccccccCCcceEEEEeeccceEEEEEecCCCceEEEEecccccchhhhcccc
Q ss_pred CEEEEE-eCCcEEEEEcccceeEEEec----CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCc-eeEEecccccccEE
Q 019326 184 EKFFMV-TEEKVGIHQAEDAKLLCELD----GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGK-VAYCIEDAHSARVK 257 (343)
Q Consensus 184 ~~~~~~-~~~~i~~~d~~~~~~~~~~~----~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~h~~~v~ 257 (343)
..+.++ .+....++...++.....+. ....-..+....++..+..+.|+...+-|..... .-.++. -.....
T Consensus 168 ~~~c~~~~~~~~ii~~~~~~~~~~~~~s~~~~~s~~P~I~~l~~~~~ll~~kd~~gv~vd~~G~~~~~~~l~--ws~~P~ 245 (877)
T KOG2063|consen 168 HIVCLGLKKSYYIINNTSKGVGPNLFPSSMDNESRKPLIKSLSDQSELLLGKDNIGVVVDLNGIIAQRGTLV--WSEVPL 245 (877)
T ss_pred eeEEEeecceeEEEecCCCccccceeeeccccccCCCeEEEecCCceEEEccCceEEEEecCCcccCCCceE--ecccch
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCC-cccccc
Q 019326 258 GIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPL-PLAEAK 306 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~ 306 (343)
++.+.+. ++++-+.. .|.||+..++...+.+ ++....
T Consensus 246 ~v~~~~P-----------YlIa~~~~-~veI~s~~~~qlvQSI~~~~~~~ 283 (877)
T KOG2063|consen 246 SVVVESP-----------YLIALLDR-SVEIRSKLDGQLVQSITPLSNGR 283 (877)
T ss_pred hhcccCc-----------eEEEEccc-cEEEEeccCHHHhhccccccccc
No 491
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=86.88 E-value=15 Score=29.69 Aligned_cols=139 Identities=14% Similarity=0.109 Sum_probs=79.5
Q ss_pred CeEEEEec--CceEEEee-CCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEE-CCC
Q 019326 44 PITTVAVS--GTAAASGG-TDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFD-ADP 119 (343)
Q Consensus 44 ~v~~l~~~--~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd-~~~ 119 (343)
.+.+.+.+ ++.++... .++.-.+|-...+........ ...+..-.|.+++ ...+....+...+++. ...
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~--g~~l~~PS~d~~g-----~~W~v~~~~~~~~~~~~~~~ 97 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLT--GGSLTRPSWDPDG-----WVWTVDDGSGGVRVVRDSAS 97 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeecc--CCccccccccCCC-----CEEEEEcCCCceEEEEecCC
Confidence 57777777 66555544 223333333333333333322 3477788899987 4455545555666663 223
Q ss_pred ccee-eeeeec--cccEEEEEEecCCCEEEEEe---CCCeEEEEEccCCcee---------EEE-EcCCcceEEEEeCCC
Q 019326 120 FVLL-TSVKVH--KKGVNDLAVHHSGKLALTVG---RDDCLAMVNLVRGRRS---------FYH-KIGKEASLIKFDGSG 183 (343)
Q Consensus 120 ~~~~-~~~~~~--~~~v~~i~~~~~~~~l~~~~---~d~~i~~wd~~~~~~~---------~~~-~~~~~~~~~~~~~~~ 183 (343)
++.. ...... ...|..+.++|||..++... .++.|.+--+.....- ... .....+..+.|.+++
T Consensus 98 g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~ 177 (253)
T PF10647_consen 98 GTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDS 177 (253)
T ss_pred CcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCC
Confidence 2221 112211 12899999999998877666 3577777655422110 011 123567889999999
Q ss_pred CEEEEE
Q 019326 184 EKFFMV 189 (343)
Q Consensus 184 ~~~~~~ 189 (343)
.+++..
T Consensus 178 ~L~V~~ 183 (253)
T PF10647_consen 178 TLVVLG 183 (253)
T ss_pred EEEEEe
Confidence 988888
No 492
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=86.87 E-value=19 Score=30.93 Aligned_cols=190 Identities=17% Similarity=0.173 Sum_probs=109.4
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeC----CCCCCCCceEEEee-CC---CeEEEEECCCc-ce
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYT----PQNLSVPRNLFSTS-AD---GFVSIFDADPF-VL 122 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~----~~~~~~~~~l~s~~-~d---g~i~iwd~~~~-~~ 122 (343)
..+++....++-+.+||++ |+.+..+.. +.++.+.... .+. .--|+.++ .+ .+|++|.+... ..
T Consensus 68 kSlIigTdK~~GL~VYdL~-Gk~lq~~~~---Gr~NNVDvrygf~l~g~---~vDlavas~R~~g~n~l~~f~id~~~g~ 140 (381)
T PF02333_consen 68 KSLIIGTDKKGGLYVYDLD-GKELQSLPV---GRPNNVDVRYGFPLNGK---TVDLAVASDRSDGRNSLRLFRIDPDTGE 140 (381)
T ss_dssp G-EEEEEETTTEEEEEETT-S-EEEEE-S---S-EEEEEEEEEEEETTE---EEEEEEEEE-CCCT-EEEEEEEETTTTE
T ss_pred cceEEEEeCCCCEEEEcCC-CcEEEeecC---CCcceeeeecceecCCc---eEEEEEEecCcCCCCeEEEEEecCCCCc
Confidence 4577777888889999998 666666642 3444444321 220 01244444 32 47999977531 12
Q ss_pred eeeeee-------ccccEEEEEEe--c-CC-CEEEEEeCCCeEEEEEccC---C----ceeEEEEcCCcceEEEEeCCCC
Q 019326 123 LTSVKV-------HKKGVNDLAVH--H-SG-KLALTVGRDDCLAMVNLVR---G----RRSFYHKIGKEASLIKFDGSGE 184 (343)
Q Consensus 123 ~~~~~~-------~~~~v~~i~~~--~-~~-~~l~~~~~d~~i~~wd~~~---~----~~~~~~~~~~~~~~~~~~~~~~ 184 (343)
+..+.. ....+..+|+- + ++ -+.+....+|.+..|.+.. + +.++.+....++..|.......
T Consensus 141 L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g 220 (381)
T PF02333_consen 141 LTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETG 220 (381)
T ss_dssp EEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTT
T ss_pred ceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccC
Confidence 222221 12346777763 3 34 3677778899998888752 2 2467778888999999999999
Q ss_pred EEEEE-eCCcEEEEEccc-----ceeEEEec---CCcceEEeeec---CC-CeEEE-EeCCCcEEEEECCCC-ceeEEe
Q 019326 185 KFFMV-TEEKVGIHQAED-----AKLLCELD---GKKRILCAAPG---EN-GVLFT-GGEDRSITAWDTNSG-KVAYCI 248 (343)
Q Consensus 185 ~~~~~-~~~~i~~~d~~~-----~~~~~~~~---~~~~i~~~~~~---~~-~~l~~-~~~dg~i~i~d~~~~-~~~~~~ 248 (343)
.++.+ .+.-|.-|+.+. ++.+.... ....+..+++. ++ .||++ .-.+++..+|+.... ..+..+
T Consensus 221 ~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~~~~~g~f 299 (381)
T PF02333_consen 221 RLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGPNAYVGSF 299 (381)
T ss_dssp EEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT--EEEEE
T ss_pred CEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCCCcccceE
Confidence 99999 777788887762 22222222 12445566653 22 35554 445778999998753 334444
No 493
>PLN02153 epithiospecifier protein
Probab=86.68 E-value=19 Score=30.62 Aligned_cols=109 Identities=12% Similarity=0.083 Sum_probs=52.0
Q ss_pred ecCceEEEeeCC-------CeEEEEEcCCCeeeeEec--cCCCC-Ce-EEEEEeCCCCCCCCceEEEeeCC-----CeEE
Q 019326 50 VSGTAAASGGTD-------DTIHLYDLSTSSSLGAIH--HHESS-SV-TSLAFYTPQNLSVPRNLFSTSAD-----GFVS 113 (343)
Q Consensus 50 ~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~--~~~~~-~v-~~l~~~~~~~~~~~~~l~s~~~d-----g~i~ 113 (343)
..+.+++.|+.+ ..+.+||+.+.+-...-. ..... .. .+++.. ++ ++++.|+.+ ..+.
T Consensus 31 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~-~~-----~iyv~GG~~~~~~~~~v~ 104 (341)
T PLN02153 31 VGDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAV-GT-----KLYIFGGRDEKREFSDFY 104 (341)
T ss_pred ECCEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEE-CC-----EEEEECCCCCCCccCcEE
Confidence 346666666653 257788887764332111 01011 00 112222 23 567777753 3577
Q ss_pred EEECCCcc--eeeeeee---ccccEEEEEEecCCCEEEEEeCC-----------CeEEEEEccCCce
Q 019326 114 IFDADPFV--LLTSVKV---HKKGVNDLAVHHSGKLALTVGRD-----------DCLAMVNLVRGRR 164 (343)
Q Consensus 114 iwd~~~~~--~~~~~~~---~~~~v~~i~~~~~~~~l~~~~~d-----------~~i~~wd~~~~~~ 164 (343)
+||+.+.+ .+..+.. ........+..-++++++.|+.+ ..+.+||..+.+-
T Consensus 105 ~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W 171 (341)
T PLN02153 105 SYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKW 171 (341)
T ss_pred EEECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeE
Confidence 88886533 2222210 11111112222345667777753 2477888877653
No 494
>KOG3522 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=86.48 E-value=9.3 Score=35.86 Aligned_cols=140 Identities=15% Similarity=0.104 Sum_probs=84.0
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEE--------EEcCCCee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHL--------YDLSTSSS 74 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~i--------wd~~~~~~ 74 (343)
+..|+.++.|.++.-.. +...+. ...........+.++.++...+..|.-||++-. ||.+ +
T Consensus 550 ic~gtq~ssisissss~-------~s~ke~-~~~~~spe~~~v~~l~~ss~Slgagl~dgt~a~y~rap~gSwd~e---p 618 (925)
T KOG3522|consen 550 ICLGTQTSSISISSSSL-------DSIKEV-TSEPPSPEHESVKLLLFSSGSLGAGLIDGTLAVYGRAPSGSWDGE---P 618 (925)
T ss_pred ccccCccceeEEeeccC-------Ccccce-eccCCCCchhhhhhhhccccccccCccCCccccccCCCCCCCCCC---C
Confidence 56788889999987652 111111 111122234667788887555555666666544 4433 2
Q ss_pred eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeee---ccccEEEEEEecCCCEEEEEeCC
Q 019326 75 LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKV---HKKGVNDLAVHHSGKLALTVGRD 151 (343)
Q Consensus 75 ~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~i~~~~~~~~l~~~~~d 151 (343)
...+... ..+|.++++.. -++.++.+|.|.++...+......+.. |...|+++....++-+++..+.
T Consensus 619 ~~~~~~g-~lPvrsla~~e--------d~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG- 688 (925)
T KOG3522|consen 619 NISIPTG-SLPVRSLAFQE--------DFVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASG- 688 (925)
T ss_pred ccccccC-Cccccchhhhh--------ceeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCC-
Confidence 2333333 57788888764 367788999999999977665555544 4457888888876644444333
Q ss_pred CeEEEEEccCCc
Q 019326 152 DCLAMVNLVRGR 163 (343)
Q Consensus 152 ~~i~~wd~~~~~ 163 (343)
..+++++.++..
T Consensus 689 ~~~rlfhtetl~ 700 (925)
T KOG3522|consen 689 DEERLFHTETLW 700 (925)
T ss_pred CEEEEecccccC
Confidence 355655555443
No 495
>KOG1896 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit) [RNA processing and modification]
Probab=86.47 E-value=36 Score=33.76 Aligned_cols=175 Identities=14% Similarity=0.112 Sum_probs=88.0
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeC---C-CCCCCCceEEEeeC---------CCeEEEEEC-----CCccee
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYT---P-QNLSVPRNLFSTSA---------DGFVSIFDA-----DPFVLL 123 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~---~-~~~~~~~~l~s~~~---------dg~i~iwd~-----~~~~~~ 123 (343)
..|.+-+..+++.+..+.-.....|.+++... . .......+|++|.. -|.+.++|+ +.+++.
T Consensus 1004 f~i~LisP~sw~vi~~iefq~~E~v~~~k~v~L~~~~t~~~~k~ylavGT~~~~gEDv~~RGr~hi~diIeVVPepgkP~ 1083 (1366)
T KOG1896|consen 1004 FSIQLISPESWEVIDKIEFQENEHVLHMKYVILDDEETTKGKKPYLAVGTAFIQGEDVPARGRIHIFDIIEVVPEPGKPF 1083 (1366)
T ss_pred ceeEEecCCccccccccccCccceeeEEEEEEEEecccccCCcceEEEEEeecccccccCcccEEEEEEEEecCCCCCCc
Confidence 34555555566555544433234455554431 1 11122357887764 378999997 233322
Q ss_pred eee-------eeccccEEEEEEecCCCEEEEEeCCCeEEEEEc-cCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcE
Q 019326 124 TSV-------KVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL-VRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKV 194 (343)
Q Consensus 124 ~~~-------~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i 194 (343)
... +..++.|..++= -+|. |+++ ....|.+|++ +....+...-..-++.......-.++++.+ --..+
T Consensus 1084 t~~KlKel~~eE~KGtVsavce-V~G~-l~~~-~GqKI~v~~l~r~~~ligVaFiD~~~yv~s~~~vknlIl~gDV~ksi 1160 (1366)
T KOG1896|consen 1084 TKNKLKELYIEEQKGTVSAVCE-VRGH-LLSS-QGQKIIVRKLDRDSELIGVAFIDLPLYVHSMKVVKNLILAGDVMKSI 1160 (1366)
T ss_pred ccceeeeeehhhcccceEEEEE-eccE-EEEc-cCcEEEEEEeccCCcceeeEEeccceeEEehhhhhhheehhhhhhce
Confidence 211 124566666553 3454 4443 3457999999 444433332233333333443444555555 33444
Q ss_pred EEEEccc-ceeEEEec---CCcceEEeeec-CCC--eEEEEeCCCcEEEEEC
Q 019326 195 GIHQAED-AKLLCELD---GKKRILCAAPG-ENG--VLFTGGEDRSITAWDT 239 (343)
Q Consensus 195 ~~~d~~~-~~~~~~~~---~~~~i~~~~~~-~~~--~l~~~~~dg~i~i~d~ 239 (343)
.+..... ...+.-+. ..-.+.+..|- ++. .++++..++.|++|-.
T Consensus 1161 sfl~fqeep~rlsL~srd~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y 1212 (1366)
T KOG1896|consen 1161 SFLGFQEEPYRLSLLSRDFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMY 1212 (1366)
T ss_pred EEEEEccCceEEEEeecCCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEe
Confidence 4433322 12222222 22335555554 433 7888899999988754
No 496
>KOG1898 consensus Splicing factor 3b, subunit 3 [RNA processing and modification]
Probab=86.02 E-value=36 Score=33.25 Aligned_cols=172 Identities=14% Similarity=0.100 Sum_probs=92.8
Q ss_pred eEEEEEcCCCeeeeEeccCC---CCCeEEEEEeCCCCCCCCceEEEeeC-----------CCeEEEEEC-CCcceeeeee
Q 019326 63 TIHLYDLSTSSSLGAIHHHE---SSSVTSLAFYTPQNLSVPRNLFSTSA-----------DGFVSIFDA-DPFVLLTSVK 127 (343)
Q Consensus 63 ~i~iwd~~~~~~~~~~~~~~---~~~v~~l~~~~~~~~~~~~~l~s~~~-----------dg~i~iwd~-~~~~~~~~~~ 127 (343)
.|++.|..+++.+..+.... .-.+.++.|+.... ..++++|.. +|.++.|++ +.++.+.-+.
T Consensus 854 ~I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~---~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh 930 (1205)
T KOG1898|consen 854 SIRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEY---QPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLH 930 (1205)
T ss_pred eEEEEcCCCCceEEEEeecCCcchhheeeeeeccCCC---ceEEEEEeeccccccccccCCCceEEEEEEecCceeeeee
Confidence 48888888777666554320 23456666665542 123333332 244666665 3333222221
Q ss_pred e--ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCC-cceEEEEeCCCCEEEEE-eCCcEE--EEEccc
Q 019326 128 V--HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGK-EASLIKFDGSGEKFFMV-TEEKVG--IHQAED 201 (343)
Q Consensus 128 ~--~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~--~~d~~~ 201 (343)
. -.+.| .+..|-..++++ +....+++||+-..+.++...... +.........+.+++++ ....+. .|+...
T Consensus 931 ~T~~~~~v--~Ai~~f~~~~La-gvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~~~RI~VgD~qeSV~~~~y~~~~ 1007 (1205)
T KOG1898|consen 931 KTEIPGPV--GAICPFQGRVLA-GVGRFLRLYDLGKKKLLRKCELKFIPNRISSIQTYGARIVVGDIQESVHFVRYRRED 1007 (1205)
T ss_pred ccCCCccc--eEEeccCCEEEE-ecccEEEEeeCChHHHHhhhhhccCceEEEEEeecceEEEEeeccceEEEEEEecCC
Confidence 1 12234 344555555554 445689999998776655544443 22222333356777777 333333 344333
Q ss_pred ceeEEEec--CCcceEEeeecCCCeEEEEeCCCcEEEEECC
Q 019326 202 AKLLCELD--GKKRILCAAPGENGVLFTGGEDRSITAWDTN 240 (343)
Q Consensus 202 ~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~ 240 (343)
.+...-.. -+..++++.+-+.+.++.+..=|.+.+..+.
T Consensus 1008 n~l~~fadD~~pR~Vt~~~~lD~~tvagaDrfGNi~~vR~P 1048 (1205)
T KOG1898|consen 1008 NQLIVFADDPVPRHVTALELLDYDTVAGADRFGNIAVVRIP 1048 (1205)
T ss_pred CeEEEEeCCCccceeeEEEEecCCceeeccccCcEEEEECC
Confidence 33333332 3445777777677888888888888777654
No 497
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=85.81 E-value=32 Score=32.50 Aligned_cols=92 Identities=9% Similarity=0.117 Sum_probs=47.6
Q ss_pred eEEEEeCCCCEEEEE-eCCc-----EEEEEcc---cceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCcee
Q 019326 175 SLIKFDGSGEKFFMV-TEEK-----VGIHQAE---DAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVA 245 (343)
Q Consensus 175 ~~~~~~~~~~~~~~~-~~~~-----i~~~d~~---~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 245 (343)
..+.|-|+|..+++- .|+. +..+..+ .|+.-............+|.-...+.+....+.|.+|-..+-.-.
T Consensus 250 ~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~~~n~~~lwttkNyhWY 329 (1243)
T COG5290 250 HQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVAEGNLLKLWTTKNYHWY 329 (1243)
T ss_pred hccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHHHhhcceEEEEEccceEEE
Confidence 348999999999887 4432 3333321 122212222334455556643333334455678999977654322
Q ss_pred EEecccccccEEEEEEEecCCC
Q 019326 246 YCIEDAHSARVKGIVVLTKNDG 267 (343)
Q Consensus 246 ~~~~~~h~~~v~~~~~~~~~~~ 267 (343)
.... -.-..+.-+.|+|...+
T Consensus 330 LK~e-~~ip~~s~vkwhpe~~n 350 (1243)
T COG5290 330 LKVE-RQIPGISYVKWHPEEKN 350 (1243)
T ss_pred EEEe-ecCCCcceeeeccccCc
Confidence 2222 22334555667766553
No 498
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=84.59 E-value=22 Score=29.62 Aligned_cols=227 Identities=12% Similarity=-0.025 Sum_probs=108.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--Cc-eEEEeeCCCeEEEEEcCCCee----
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GT-AAASGGTDDTIHLYDLSTSSS---- 74 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~~~dg~i~iwd~~~~~~---- 74 (343)
.|+.|+.+|...+ +... .......+ .+..+|+++... -+ .++.++....++.+++..-..
T Consensus 15 ~lL~GTe~Gly~~-~~~~--------~~~~~~kl----~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~~~~~~ 81 (302)
T smart00036 15 WLLVGTEEGLYVL-NISD--------QPGTLEKL----IGRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKEA 81 (302)
T ss_pred EEEEEeCCceEEE-Eccc--------CCCCeEEe----cCcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhhhhhhc
Confidence 5788888886544 4442 11112222 356789999887 33 344455555699999843221
Q ss_pred -----------eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc----ceeeee---e-eccccEEE
Q 019326 75 -----------LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF----VLLTSV---K-VHKKGVND 135 (343)
Q Consensus 75 -----------~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~---~-~~~~~v~~ 135 (343)
....-.+ .............. ..++.+....+|.++..... .....+ . ....++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~-tkGc~~~~v~~~~~----~~~l~~A~~~~i~l~~~~~~~~~f~~~k~~~~~~~~~~~~~~~ 156 (302)
T smart00036 82 LGSARLVIRKNVLTKIPD-TKGCHLCAVVNGKR----SLFLCVALQSSVVLLQWYNPLKKFKLFKSKFLFPLISPVPVFV 156 (302)
T ss_pred cCCccccccccceEeCCc-CCceEEEEEEcCCC----cEEEEEEcCCeEEEEEccChhhhhhhhcccccccCCCCccceE
Confidence 0111123 23233333332221 23445555567777644221 112211 0 01123333
Q ss_pred EEEecC--CCEEEEEeCCCeEEEEEccC--Ccee----E--EEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEccccee-
Q 019326 136 LAVHHS--GKLALTVGRDDCLAMVNLVR--GRRS----F--YHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKL- 204 (343)
Q Consensus 136 i~~~~~--~~~l~~~~~d~~i~~wd~~~--~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~- 204 (343)
+..+++ ...+..|+..+...++++.. .... . .......+.++..-+++ .++.+.+......|....+.
T Consensus 157 ~~~~~~~~~~~lcvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~~~~~p~~i~~l~~~-e~Llc~~~~~v~Vn~~G~~~~ 235 (302)
T smart00036 157 ELVSSSFERPGICIGSDKGGGDVVQFHESLVSKEDLSLPFLSEETSLKPISVVQVPRD-EFLLCYDEFGVFVNLYGKRRS 235 (302)
T ss_pred eeecccccceEEEEEEcCCCCeEEEEeecccccccccccccccccccCceEEEEECCC-eEEEEECcEEEEEeCCCCccc
Confidence 333332 34666666643344444432 1100 0 00001023333333333 45555555555555543121
Q ss_pred -EEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 205 -LCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 205 -~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
...+.-.....++++.. .++++-. +..|.++++.+++.++++.
T Consensus 236 r~~~l~w~~~p~~~~~~~-pyll~~~-~~~ievr~l~~~~l~q~i~ 279 (302)
T smart00036 236 RNPILHWEFMPESFAYHS-PYLLAFH-DNGIEIRSIKTGELLQELA 279 (302)
T ss_pred cceEEEcCCcccEEEEEC-CEEEEEc-CCcEEEEECCCCceEEEEe
Confidence 12333445566777753 5555554 4559999999999888887
No 499
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=83.91 E-value=12 Score=28.16 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=29.1
Q ss_pred cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 253 SARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 253 ~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
...+.+++|+|.+-. ...+-+|+....+|.|.||.-..
T Consensus 85 ~~~vv~~aWSP~Gl~---~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 85 SSQVVSAAWSPSGLG---PNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cccEEEEEECCCCCC---CCCceEEEEEcCCCeEEEEecCC
Confidence 348899999997742 12244889999999999998764
No 500
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=83.37 E-value=22 Score=28.52 Aligned_cols=135 Identities=9% Similarity=0.076 Sum_probs=71.0
Q ss_pred EEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC---CeEEEEEccCC--ceeE-----EEEcCCcceEEEEeC
Q 019326 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD---DCLAMVNLVRG--RRSF-----YHKIGKEASLIKFDG 181 (343)
Q Consensus 112 i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d---~~i~~wd~~~~--~~~~-----~~~~~~~~~~~~~~~ 181 (343)
-.+||+.+++....-......+.+-.+.++|+++.+|+.. ..+++++.... .+.. ....+..-......+
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~ 127 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLP 127 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECC
Confidence 4578887755322211222344455678999999998862 34777776440 1111 112223344566678
Q ss_pred CCCEEEEE-eC-CcEEEEEccc-ceeEEE---ec--------CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEE
Q 019326 182 SGEKFFMV-TE-EKVGIHQAED-AKLLCE---LD--------GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYC 247 (343)
Q Consensus 182 ~~~~~~~~-~~-~~i~~~d~~~-~~~~~~---~~--------~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 247 (343)
+|+.++++ .. .....|.... ...... +. .-.+...+.. ++++++.+..+ -.|||..+.+.++.
T Consensus 128 DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llP-dG~lFi~an~~--s~i~d~~~n~v~~~ 204 (243)
T PF07250_consen 128 DGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLP-DGNLFIFANRG--SIIYDYKTNTVVRT 204 (243)
T ss_pred CCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcC-CCCEEEEEcCC--cEEEeCCCCeEEee
Confidence 99999888 33 3344444321 111111 11 1112222222 56666666554 44679888877777
Q ss_pred ec
Q 019326 248 IE 249 (343)
Q Consensus 248 ~~ 249 (343)
++
T Consensus 205 lP 206 (243)
T PF07250_consen 205 LP 206 (243)
T ss_pred CC
Confidence 66
Done!