Query 019326
Match_columns 343
No_of_seqs 650 out of 1868
Neff 11.6
Searched_HMMs 29240
Date Mon Mar 25 14:22:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019326.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019326hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 9.1E-47 3.1E-51 314.6 39.5 265 2-292 50-320 (321)
2 1vyh_C Platelet-activating fac 100.0 2.5E-47 8.4E-52 328.8 34.5 282 35-336 101-408 (410)
3 2ynn_A Coatomer subunit beta'; 100.0 1.8E-46 6E-51 310.8 36.7 279 32-330 3-294 (304)
4 1vyh_C Platelet-activating fac 100.0 7.4E-47 2.5E-51 325.8 35.5 263 2-292 122-410 (410)
5 3ow8_A WD repeat-containing pr 100.0 3.7E-46 1.3E-50 310.9 36.3 286 32-337 22-319 (321)
6 1nr0_A Actin interacting prote 100.0 7E-46 2.4E-50 335.4 37.5 307 2-337 162-609 (611)
7 1got_B GT-beta; complex (GTP-b 100.0 6E-45 2.1E-49 306.4 38.4 260 2-290 69-340 (340)
8 1got_B GT-beta; complex (GTP-b 100.0 2E-44 6.8E-49 303.2 37.2 285 31-335 44-339 (340)
9 1nr0_A Actin interacting prote 100.0 3.9E-44 1.3E-48 324.0 40.8 285 36-339 141-567 (611)
10 3frx_A Guanine nucleotide-bind 100.0 7.7E-44 2.6E-48 296.9 38.3 290 31-338 6-316 (319)
11 4gqb_B Methylosome protein 50; 100.0 6.1E-45 2.1E-49 305.8 31.4 276 3-295 44-333 (344)
12 3frx_A Guanine nucleotide-bind 100.0 1.7E-43 5.8E-48 294.8 38.8 270 2-294 32-318 (319)
13 2ynn_A Coatomer subunit beta'; 100.0 1.5E-43 5E-48 293.3 37.0 265 2-293 27-302 (304)
14 2pbi_B Guanine nucleotide-bind 100.0 3.8E-43 1.3E-47 296.8 38.0 286 31-335 53-353 (354)
15 2pbi_B Guanine nucleotide-bind 100.0 4.5E-43 1.5E-47 296.3 37.4 261 2-290 78-354 (354)
16 4ery_A WD repeat-containing pr 100.0 5E-43 1.7E-47 291.3 36.6 263 2-292 37-311 (312)
17 3iz6_a 40S ribosomal protein R 100.0 1E-44 3.4E-49 309.6 26.8 292 32-339 56-375 (380)
18 2xzm_R RACK1; ribosome, transl 100.0 3.7E-43 1.3E-47 295.9 35.7 291 30-339 9-340 (343)
19 2hes_X YDR267CP; beta-propelle 100.0 2E-43 7E-48 295.7 33.4 291 32-338 4-327 (330)
20 2hes_X YDR267CP; beta-propelle 100.0 8.1E-43 2.8E-47 292.1 36.8 267 2-293 26-328 (330)
21 4gqb_B Methylosome protein 50; 100.0 8E-44 2.7E-48 299.0 30.1 277 40-338 28-330 (344)
22 4g56_B MGC81050 protein; prote 100.0 2.9E-44 9.9E-49 303.9 27.7 280 39-339 39-343 (357)
23 4ery_A WD repeat-containing pr 100.0 1E-42 3.4E-47 289.6 36.1 286 32-337 13-310 (312)
24 2xzm_R RACK1; ribosome, transl 100.0 1E-42 3.5E-47 293.2 36.5 272 2-294 41-341 (343)
25 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.8E-42 9.7E-47 290.6 38.8 273 2-297 30-339 (345)
26 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-42 4.7E-47 292.5 36.1 293 32-339 5-335 (345)
27 2ymu_A WD-40 repeat protein; u 100.0 1.9E-42 6.5E-47 311.5 39.1 296 2-335 276-576 (577)
28 1erj_A Transcriptional repress 100.0 2.4E-42 8.2E-47 296.2 37.6 282 40-341 62-391 (393)
29 4g56_B MGC81050 protein; prote 100.0 1.7E-43 5.9E-48 299.1 29.4 268 2-294 56-344 (357)
30 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.2E-42 2.1E-46 298.6 38.7 293 2-331 131-430 (445)
31 3vl1_A 26S proteasome regulato 100.0 7.4E-43 2.5E-47 302.2 32.2 305 2-335 70-415 (420)
32 3iz6_a 40S ribosomal protein R 100.0 7.2E-43 2.5E-47 298.1 30.0 267 2-294 80-376 (380)
33 1erj_A Transcriptional repress 100.0 2.6E-41 8.8E-46 289.8 38.8 268 3-294 79-390 (393)
34 2pm9_A Protein WEB1, protein t 100.0 7.9E-43 2.7E-47 301.5 29.6 307 7-339 42-414 (416)
35 1r5m_A SIR4-interacting protei 100.0 1.8E-41 6.3E-46 293.5 34.2 311 2-337 60-423 (425)
36 4aow_A Guanine nucleotide-bind 100.0 1.2E-40 4.2E-45 280.1 38.2 272 2-295 53-339 (340)
37 1gxr_A ESG1, transducin-like e 100.0 4.1E-41 1.4E-45 282.5 34.2 276 38-336 47-334 (337)
38 1gxr_A ESG1, transducin-like e 100.0 2.6E-40 9E-45 277.6 39.1 266 2-292 65-336 (337)
39 3v7d_B Cell division control p 100.0 2.2E-40 7.6E-45 290.4 39.6 292 2-330 134-454 (464)
40 4aow_A Guanine nucleotide-bind 100.0 2.8E-40 9.4E-45 277.9 36.9 290 31-338 27-336 (340)
41 2ymu_A WD-40 repeat protein; u 100.0 2.4E-40 8E-45 297.9 38.9 297 2-337 235-537 (577)
42 3dm0_A Maltose-binding peripla 100.0 1.2E-40 4E-45 305.9 37.3 268 2-292 397-692 (694)
43 3k26_A Polycomb protein EED; W 100.0 1.3E-41 4.6E-46 288.7 27.3 296 30-337 5-364 (366)
44 1sq9_A Antiviral protein SKI8; 100.0 4E-40 1.4E-44 282.9 33.8 281 2-294 28-396 (397)
45 1sq9_A Antiviral protein SKI8; 100.0 1.9E-40 6.5E-45 284.9 31.7 293 32-338 6-394 (397)
46 3dm0_A Maltose-binding peripla 100.0 2.1E-40 7.2E-45 304.2 33.3 288 33-338 373-692 (694)
47 3sfz_A APAF-1, apoptotic pepti 100.0 6.6E-40 2.3E-44 319.1 37.9 311 2-338 629-991 (1249)
48 4aez_A CDC20, WD repeat-contai 100.0 1.3E-39 4.3E-44 280.2 35.3 266 2-296 105-383 (401)
49 2pm7_B Protein transport prote 100.0 2E-39 6.7E-44 267.6 34.4 243 36-293 3-285 (297)
50 3zwl_B Eukaryotic translation 100.0 2.9E-39 9.8E-44 274.6 36.4 286 31-338 21-345 (369)
51 4gga_A P55CDC, cell division c 100.0 4.7E-39 1.6E-43 278.3 37.5 264 3-294 118-396 (420)
52 3k26_A Polycomb protein EED; W 100.0 3.1E-40 1E-44 280.3 29.1 266 3-293 37-366 (366)
53 3zwl_B Eukaryotic translation 100.0 7.1E-39 2.4E-43 272.1 37.2 265 2-295 46-348 (369)
54 1p22_A F-BOX/WD-repeat protein 100.0 9.8E-40 3.3E-44 283.9 32.2 257 2-295 145-416 (435)
55 3v7d_B Cell division control p 100.0 4E-39 1.4E-43 282.4 35.5 279 34-337 113-419 (464)
56 3ei3_B DNA damage-binding prot 100.0 3.9E-39 1.3E-43 275.5 33.6 263 2-293 88-382 (383)
57 3odt_A Protein DOA1; ubiquitin 100.0 1E-38 3.6E-43 265.1 34.4 258 2-295 31-298 (313)
58 1k8k_C P40, ARP2/3 complex 41 100.0 8.2E-39 2.8E-43 272.3 33.6 273 2-295 22-363 (372)
59 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-38 5.1E-43 264.2 34.4 279 32-338 8-295 (313)
60 3ei3_B DNA damage-binding prot 100.0 5.3E-39 1.8E-43 274.7 32.4 285 32-338 63-381 (383)
61 1k8k_C P40, ARP2/3 complex 41 100.0 3.7E-39 1.3E-43 274.4 31.1 284 39-339 5-361 (372)
62 3i2n_A WD repeat-containing pr 100.0 5.7E-39 2E-43 271.6 31.0 265 3-294 34-354 (357)
63 4ggc_A P55CDC, cell division c 100.0 8E-38 2.7E-42 260.5 37.1 264 3-294 38-316 (318)
64 2j04_B YDR362CP, TAU91; beta p 100.0 2.8E-39 9.7E-44 284.4 29.0 269 3-293 176-517 (524)
65 3vl1_A 26S proteasome regulato 100.0 6.7E-39 2.3E-43 277.4 30.0 267 2-293 111-419 (420)
66 1r5m_A SIR4-interacting protei 100.0 2E-38 6.9E-43 274.4 31.8 260 2-292 122-424 (425)
67 3i2n_A WD repeat-containing pr 100.0 3.1E-39 1.1E-43 273.3 26.1 290 36-340 12-354 (357)
68 2oaj_A Protein SNI1; WD40 repe 100.0 7.6E-39 2.6E-43 299.6 30.9 314 2-338 31-518 (902)
69 3sfz_A APAF-1, apoptotic pepti 100.0 1.4E-38 4.6E-43 309.9 33.8 306 2-339 715-1158(1249)
70 3gre_A Serine/threonine-protei 100.0 4.3E-39 1.5E-43 280.1 27.2 268 2-290 78-437 (437)
71 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.9E-37 6.6E-42 270.3 36.6 259 2-294 171-443 (445)
72 4e54_B DNA damage-binding prot 100.0 3.8E-39 1.3E-43 280.1 25.6 268 2-295 134-432 (435)
73 1pgu_A Actin interacting prote 100.0 1.1E-37 3.8E-42 282.4 36.2 247 2-261 80-347 (615)
74 3dwl_C Actin-related protein 2 100.0 2E-39 6.8E-44 276.7 23.2 268 2-291 25-377 (377)
75 3mmy_A MRNA export factor; mRN 100.0 1.6E-37 5.3E-42 263.8 34.5 283 32-337 29-344 (368)
76 3mkq_A Coatomer beta'-subunit; 100.0 9.2E-38 3.2E-42 291.9 36.1 266 2-294 27-303 (814)
77 3bg1_A Protein SEC13 homolog; 100.0 4.6E-39 1.6E-43 267.7 24.2 241 37-293 8-293 (316)
78 4h5i_A Guanine nucleotide-exch 100.0 3.7E-37 1.3E-41 261.0 35.8 273 3-294 29-344 (365)
79 2oaj_A Protein SNI1; WD40 repe 100.0 2.5E-38 8.5E-43 296.2 31.1 306 2-337 71-659 (902)
80 3mkq_A Coatomer beta'-subunit; 100.0 8.9E-38 3E-42 292.0 34.7 277 32-328 3-292 (814)
81 3gre_A Serine/threonine-protei 100.0 5.1E-38 1.7E-42 273.3 30.7 286 32-335 52-436 (437)
82 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-37 4.3E-42 262.2 30.6 243 37-295 6-339 (351)
83 4aez_A CDC20, WD repeat-contai 100.0 3.3E-37 1.1E-41 265.2 33.6 283 37-339 86-380 (401)
84 4a11_B DNA excision repair pro 100.0 3.8E-37 1.3E-41 265.1 33.4 276 2-295 58-367 (408)
85 3dwl_C Actin-related protein 2 100.0 4.2E-39 1.4E-43 274.8 20.7 237 39-292 8-280 (377)
86 1p22_A F-BOX/WD-repeat protein 100.0 2.8E-37 9.5E-42 268.4 32.5 276 36-338 127-413 (435)
87 1yfq_A Cell cycle arrest prote 100.0 1.1E-37 3.7E-42 262.4 28.0 274 38-336 7-321 (342)
88 1pgu_A Actin interacting prote 100.0 1.1E-36 3.9E-41 275.8 35.7 295 3-333 33-360 (615)
89 2pm9_A Protein WEB1, protein t 100.0 1.1E-38 3.8E-43 275.6 21.1 271 2-294 81-415 (416)
90 3dw8_B Serine/threonine-protei 100.0 3E-37 1E-41 269.1 29.3 274 41-330 27-438 (447)
91 3jrp_A Fusion protein of prote 100.0 9.5E-37 3.3E-41 260.0 31.3 245 34-293 3-287 (379)
92 2aq5_A Coronin-1A; WD40 repeat 100.0 2E-37 7E-42 266.6 27.1 268 3-295 50-344 (402)
93 4e54_B DNA damage-binding prot 100.0 1E-37 3.6E-42 271.0 25.3 285 36-339 113-430 (435)
94 2pm7_B Protein transport prote 100.0 8.9E-37 3.1E-41 251.7 29.1 250 76-338 3-284 (297)
95 3dw8_B Serine/threonine-protei 100.0 2.6E-36 9E-41 263.2 29.8 273 2-292 42-445 (447)
96 4gga_A P55CDC, cell division c 100.0 3.4E-35 1.2E-39 254.1 36.0 272 44-339 107-395 (420)
97 1yfq_A Cell cycle arrest prote 100.0 1.4E-35 4.9E-40 249.4 32.3 258 2-291 25-322 (342)
98 4h5i_A Guanine nucleotide-exch 100.0 1.8E-36 6.2E-41 256.8 26.3 277 42-339 14-343 (365)
99 3jro_A Fusion protein of prote 100.0 4.2E-36 1.4E-40 277.3 28.0 242 36-293 3-285 (753)
100 2aq5_A Coronin-1A; WD40 repeat 100.0 1.4E-35 4.7E-40 255.2 28.8 269 44-328 36-333 (402)
101 3bg1_A Protein SEC13 homolog; 100.0 2.7E-36 9.4E-41 250.9 22.7 248 78-337 9-291 (316)
102 4ggc_A P55CDC, cell division c 100.0 2.3E-34 7.8E-39 239.5 34.4 274 44-341 27-317 (318)
103 2j04_B YDR362CP, TAU91; beta p 100.0 2.7E-36 9.3E-41 265.5 23.6 271 41-323 132-458 (524)
104 4a11_B DNA excision repair pro 100.0 9.4E-36 3.2E-40 256.4 25.4 299 9-340 22-366 (408)
105 1l0q_A Surface layer protein; 100.0 1.9E-33 6.5E-38 240.9 39.4 262 2-295 4-277 (391)
106 2xyi_A Probable histone-bindin 100.0 2.9E-34 9.8E-39 248.9 32.8 244 37-295 123-412 (430)
107 3vu4_A KMHSV2; beta-propeller 100.0 1.8E-34 6.2E-39 243.8 29.9 279 33-337 10-334 (355)
108 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.1E-34 1.7E-38 248.9 32.7 270 42-328 4-374 (450)
109 3bws_A Protein LP49; two-domai 100.0 4E-34 1.4E-38 248.4 31.9 302 5-337 94-430 (433)
110 3mmy_A MRNA export factor; mRN 100.0 5.6E-34 1.9E-38 241.8 30.9 263 2-294 56-347 (368)
111 3jrp_A Fusion protein of prote 100.0 9.5E-35 3.3E-39 247.6 25.6 251 72-338 1-286 (379)
112 3bws_A Protein LP49; two-domai 100.0 4.6E-33 1.6E-37 241.7 34.9 266 3-293 137-432 (433)
113 4gq1_A NUP37; propeller, trans 100.0 3.5E-33 1.2E-37 239.1 32.1 271 2-292 32-388 (393)
114 3lrv_A PRE-mRNA-splicing facto 100.0 6.6E-34 2.2E-38 239.5 26.1 257 2-293 50-333 (343)
115 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.6E-32 5.4E-37 239.5 35.6 237 39-294 99-392 (450)
116 2j04_A TAU60, YPL007P, hypothe 100.0 9.4E-34 3.2E-38 244.3 26.2 281 2-330 29-352 (588)
117 3f3f_A Nucleoporin SEH1; struc 100.0 2.9E-32 9.9E-37 229.4 32.2 234 2-249 25-345 (351)
118 1l0q_A Surface layer protein; 100.0 1.1E-31 3.8E-36 229.9 34.8 261 53-337 3-273 (391)
119 2w18_A PALB2, fancn, partner a 100.0 3.8E-32 1.3E-36 220.6 28.6 261 2-292 56-356 (356)
120 3jro_A Fusion protein of prote 100.0 1.7E-32 5.9E-37 253.3 27.4 247 76-338 3-284 (753)
121 3lrv_A PRE-mRNA-splicing facto 100.0 7.9E-33 2.7E-37 232.9 22.1 250 52-330 48-324 (343)
122 2j04_A TAU60, YPL007P, hypothe 100.0 1.7E-32 5.8E-37 236.5 20.7 253 40-331 13-290 (588)
123 3vu4_A KMHSV2; beta-propeller 100.0 8.9E-30 3E-34 215.1 34.0 254 3-295 34-338 (355)
124 2xyi_A Probable histone-bindin 100.0 2.9E-31 1E-35 230.0 25.2 247 77-337 123-408 (430)
125 1nir_A Nitrite reductase; hemo 100.0 5.1E-30 1.8E-34 227.3 32.5 295 2-326 151-496 (543)
126 4gq1_A NUP37; propeller, trans 100.0 1.4E-30 4.7E-35 223.1 24.2 225 2-239 103-387 (393)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.2E-29 7.6E-34 216.8 29.4 285 3-322 78-411 (415)
128 2w18_A PALB2, fancn, partner a 100.0 1.3E-26 4.6E-31 188.2 29.1 283 31-336 24-354 (356)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 7.5E-26 2.6E-30 194.8 29.9 240 2-265 145-409 (415)
130 1ri6_A Putative isomerase YBHE 100.0 1.5E-25 5E-30 188.2 29.3 285 3-319 8-333 (343)
131 3u4y_A Uncharacterized protein 100.0 3.7E-25 1.3E-29 185.1 30.2 263 3-295 13-306 (331)
132 3vgz_A Uncharacterized protein 99.9 2E-24 6.8E-29 182.2 33.6 267 42-332 40-337 (353)
133 3u4y_A Uncharacterized protein 99.9 2.8E-24 9.7E-29 179.7 30.8 267 52-336 10-301 (331)
134 1nir_A Nitrite reductase; hemo 99.9 6.8E-25 2.3E-29 194.5 28.1 259 52-327 149-439 (543)
135 1pby_B Quinohemoprotein amine 99.9 3.1E-25 1.1E-29 185.7 24.4 261 2-296 3-313 (337)
136 2ecf_A Dipeptidyl peptidase IV 99.9 5.3E-25 1.8E-29 203.7 26.9 292 2-327 50-443 (741)
137 2ojh_A Uncharacterized protein 99.9 5.8E-25 2E-29 180.5 23.5 252 57-330 17-293 (297)
138 1pby_B Quinohemoprotein amine 99.9 1.1E-24 3.7E-29 182.5 24.5 262 53-337 2-308 (337)
139 2ojh_A Uncharacterized protein 99.9 9E-25 3.1E-29 179.4 23.2 248 6-284 18-293 (297)
140 1xfd_A DIP, dipeptidyl aminope 99.9 1.7E-24 6E-29 199.7 26.3 294 3-326 30-427 (723)
141 2z3z_A Dipeptidyl aminopeptida 99.9 4.3E-24 1.5E-28 196.6 26.4 261 43-328 82-420 (706)
142 2ecf_A Dipeptidyl peptidase IV 99.9 1.1E-23 3.6E-28 195.0 26.4 264 42-328 36-399 (741)
143 3vgz_A Uncharacterized protein 99.9 1.6E-22 5.3E-27 170.5 31.4 246 9-284 68-335 (353)
144 1ri6_A Putative isomerase YBHE 99.9 5.1E-23 1.7E-27 172.7 27.8 264 54-335 7-304 (343)
145 3hfq_A Uncharacterized protein 99.9 3.8E-22 1.3E-26 167.9 32.0 265 2-292 4-316 (347)
146 1jmx_B Amine dehydrogenase; ox 99.9 8.5E-23 2.9E-27 171.8 25.3 228 48-295 5-327 (349)
147 1k32_A Tricorn protease; prote 99.9 4.2E-23 1.5E-27 197.4 26.3 269 38-332 199-495 (1045)
148 3scy_A Hypothetical bacterial 99.9 7.1E-21 2.4E-25 161.1 36.3 284 2-317 15-360 (361)
149 2z3z_A Dipeptidyl aminopeptida 99.9 1E-21 3.4E-26 180.8 27.3 257 7-295 98-437 (706)
150 1xfd_A DIP, dipeptidyl aminope 99.9 1.5E-22 5E-27 186.9 21.5 267 43-329 17-380 (723)
151 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.5E-20 5.1E-25 159.2 31.3 269 2-294 4-342 (365)
152 2oit_A Nucleoporin 214KDA; NH2 99.9 3.8E-21 1.3E-25 166.1 27.7 192 3-202 51-279 (434)
153 3o4h_A Acylamino-acid-releasin 99.9 9.6E-22 3.3E-26 176.9 22.7 258 41-330 20-303 (582)
154 1jmx_B Amine dehydrogenase; ox 99.9 8.5E-21 2.9E-25 159.6 27.1 226 2-249 13-333 (349)
155 1k32_A Tricorn protease; prote 99.9 6.4E-21 2.2E-25 182.4 27.5 279 3-321 217-523 (1045)
156 3hfq_A Uncharacterized protein 99.9 8.8E-20 3E-24 153.4 29.5 255 60-333 14-311 (347)
157 2oit_A Nucleoporin 214KDA; NH2 99.9 4.7E-21 1.6E-25 165.5 21.1 193 42-242 36-279 (434)
158 3o4h_A Acylamino-acid-releasin 99.9 2.7E-20 9.1E-25 167.5 25.0 253 2-293 35-315 (582)
159 1z68_A Fibroblast activation p 99.9 5.6E-21 1.9E-25 176.2 19.9 291 3-325 29-426 (719)
160 3scy_A Hypothetical bacterial 99.9 3.1E-18 1.1E-22 144.8 34.2 247 3-262 64-360 (361)
161 3pe7_A Oligogalacturonate lyas 99.9 6.4E-19 2.2E-23 150.4 27.0 276 34-328 22-370 (388)
162 3fvz_A Peptidyl-glycine alpha- 99.8 1.2E-17 4.2E-22 139.2 32.3 238 41-293 22-322 (329)
163 2oiz_A Aromatic amine dehydrog 99.8 6.1E-19 2.1E-23 148.8 24.1 275 8-321 29-360 (361)
164 1q7f_A NHL, brain tumor CG1071 99.8 6.4E-17 2.2E-21 132.1 31.2 233 40-294 27-281 (286)
165 3dsm_A Uncharacterized protein 99.8 2.6E-17 8.9E-22 137.1 28.6 263 7-295 14-303 (328)
166 2dg1_A DRP35, lactonase; beta 99.8 2.4E-16 8.1E-21 131.7 33.5 225 34-266 36-292 (333)
167 1z68_A Fibroblast activation p 99.8 1.8E-19 6.1E-24 166.2 14.3 230 47-294 20-347 (719)
168 3no2_A Uncharacterized protein 99.8 1.1E-16 3.7E-21 129.6 28.9 203 52-266 5-225 (276)
169 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.9E-17 9.8E-22 139.0 25.2 261 54-333 4-335 (365)
170 4a5s_A Dipeptidyl peptidase 4 99.8 2.6E-18 8.9E-23 158.7 19.9 257 43-324 17-334 (740)
171 3pe7_A Oligogalacturonate lyas 99.8 3E-17 1E-21 140.0 22.8 261 3-293 50-382 (388)
172 3c5m_A Oligogalacturonate lyas 99.8 1.7E-17 5.7E-22 141.9 20.9 262 45-328 38-370 (396)
173 1qks_A Cytochrome CD1 nitrite 99.8 4.1E-15 1.4E-19 131.7 36.6 293 3-326 170-520 (567)
174 4a5s_A Dipeptidyl peptidase 4 99.8 7.1E-17 2.4E-21 149.1 26.3 290 9-329 35-436 (740)
175 2dg1_A DRP35, lactonase; beta 99.8 1.3E-16 4.3E-21 133.4 25.3 267 43-329 6-300 (333)
176 3dsm_A Uncharacterized protein 99.8 2.5E-16 8.5E-21 131.1 26.8 245 60-326 15-285 (328)
177 3azo_A Aminopeptidase; POP fam 99.8 5.5E-17 1.9E-21 148.2 23.0 238 37-292 18-322 (662)
178 1q7f_A NHL, brain tumor CG1071 99.8 1.6E-15 5.3E-20 123.9 29.1 219 3-243 44-282 (286)
179 2gop_A Trilobed protease; beta 99.8 6.9E-16 2.4E-20 129.6 26.5 236 9-292 42-330 (347)
180 3e5z_A Putative gluconolactona 99.8 1.8E-15 6E-20 124.2 27.7 233 38-293 23-286 (296)
181 2gop_A Trilobed protease; beta 99.8 2.5E-15 8.4E-20 126.2 28.7 250 44-332 16-323 (347)
182 3no2_A Uncharacterized protein 99.8 1.6E-15 5.4E-20 122.7 25.6 226 2-249 7-260 (276)
183 3fvz_A Peptidyl-glycine alpha- 99.7 5.9E-16 2E-20 129.0 23.2 245 83-337 23-320 (329)
184 2xdw_A Prolyl endopeptidase; a 99.7 1.7E-15 5.7E-20 139.4 27.7 239 40-295 122-416 (710)
185 3azo_A Aminopeptidase; POP fam 99.7 5.4E-16 1.8E-20 141.6 24.1 258 7-294 44-370 (662)
186 2oiz_A Aromatic amine dehydrog 99.7 4.1E-15 1.4E-19 125.4 26.3 236 8-266 79-360 (361)
187 1rwi_B Serine/threonine-protei 99.7 5.5E-15 1.9E-19 119.5 25.8 234 44-295 25-266 (270)
188 3e5z_A Putative gluconolactona 99.7 9.7E-15 3.3E-19 119.8 26.5 231 73-330 18-278 (296)
189 2z2n_A Virginiamycin B lyase; 99.7 4.2E-13 1.4E-17 109.9 35.9 266 38-329 10-286 (299)
190 2bkl_A Prolyl endopeptidase; m 99.7 8.6E-16 2.9E-20 140.9 21.5 239 40-295 118-399 (695)
191 1qks_A Cytochrome CD1 nitrite 99.7 1.5E-13 5.2E-18 121.7 33.3 258 52-327 167-458 (567)
192 3c5m_A Oligogalacturonate lyas 99.7 1.6E-15 5.6E-20 129.5 20.1 226 47-292 85-381 (396)
193 3sjl_D Methylamine dehydrogena 99.7 2.3E-14 8E-19 119.5 24.6 274 9-319 58-384 (386)
194 2z2n_A Virginiamycin B lyase; 99.7 2E-12 6.9E-17 105.8 35.5 232 40-294 54-296 (299)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 3.2E-13 1.1E-17 111.6 30.7 236 40-294 15-300 (314)
196 3q7m_A Lipoprotein YFGL, BAMB; 99.7 1E-13 3.4E-18 117.8 28.1 261 2-295 55-339 (376)
197 1rwi_B Serine/threonine-protei 99.7 3.3E-14 1.1E-18 114.9 21.1 236 85-340 25-265 (270)
198 2xdw_A Prolyl endopeptidase; a 99.6 2.2E-13 7.5E-18 125.3 28.8 221 84-324 125-395 (710)
199 2qc5_A Streptogramin B lactona 99.6 1.4E-11 4.8E-16 100.9 36.3 264 38-327 15-290 (300)
200 2bkl_A Prolyl endopeptidase; m 99.6 8.7E-14 3E-18 127.6 24.1 254 51-324 78-378 (695)
201 2mad_H Methylamine dehydrogena 99.6 3.1E-12 1.1E-16 107.9 30.7 258 52-337 32-348 (373)
202 3q7m_A Lipoprotein YFGL, BAMB; 99.6 6.4E-13 2.2E-17 112.8 26.2 254 2-290 105-375 (376)
203 1yiq_A Quinohemoprotein alcoho 99.6 7.6E-13 2.6E-17 120.6 27.8 266 2-296 72-508 (689)
204 1kb0_A Quinohemoprotein alcoho 99.6 3.9E-13 1.3E-17 122.2 25.3 267 2-297 79-511 (677)
205 1kb0_A Quinohemoprotein alcoho 99.6 9.9E-13 3.4E-17 119.6 27.9 248 2-266 130-532 (677)
206 2mad_H Methylamine dehydrogena 99.6 3.2E-11 1.1E-15 101.8 34.6 253 11-298 48-355 (373)
207 1yr2_A Prolyl oligopeptidase; 99.6 2.4E-13 8.1E-18 125.6 23.5 238 41-295 161-443 (741)
208 1yiq_A Quinohemoprotein alcoho 99.6 1.7E-12 5.8E-17 118.3 28.5 253 2-266 123-530 (689)
209 3g4e_A Regucalcin; six bladed 99.6 2.4E-11 8.3E-16 99.5 32.7 215 41-266 11-254 (297)
210 2qc5_A Streptogramin B lactona 99.6 4.8E-11 1.7E-15 97.6 33.2 249 8-292 39-299 (300)
211 3hrp_A Uncharacterized protein 99.6 8.8E-12 3E-16 106.6 29.4 230 43-292 131-409 (409)
212 3sjl_D Methylamine dehydrogena 99.6 1.6E-12 5.5E-17 108.5 22.1 257 52-332 44-356 (386)
213 3hxj_A Pyrrolo-quinoline quino 99.5 1.8E-13 6.1E-18 114.0 16.3 283 2-333 32-318 (330)
214 1xip_A Nucleoporin NUP159; bet 99.5 9.1E-13 3.1E-17 110.4 19.3 167 44-227 39-230 (388)
215 1yr2_A Prolyl oligopeptidase; 99.5 7.9E-12 2.7E-16 115.5 27.5 221 84-324 163-422 (741)
216 2ghs_A AGR_C_1268P; regucalcin 99.5 1.5E-10 5.2E-15 96.0 32.6 209 44-266 50-284 (326)
217 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.7E-11 5.7E-16 101.2 26.6 223 83-328 17-288 (314)
218 3hxj_A Pyrrolo-quinoline quino 99.5 1.1E-12 3.9E-17 109.1 19.5 218 51-294 106-325 (330)
219 3dr2_A Exported gluconolactona 99.5 3.4E-11 1.2E-15 99.0 26.5 223 38-284 40-298 (305)
220 1xip_A Nucleoporin NUP159; bet 99.5 1E-12 3.6E-17 110.1 17.0 173 132-325 39-230 (388)
221 2hz6_A Endoplasmic reticulum t 99.5 1.1E-16 3.8E-21 135.2 -8.0 254 2-293 11-279 (369)
222 3hrp_A Uncharacterized protein 99.5 2E-11 6.8E-16 104.5 24.3 231 84-333 131-404 (409)
223 3c75_H MADH, methylamine dehyd 99.5 3.4E-12 1.2E-16 108.4 18.7 260 52-336 84-399 (426)
224 2hz6_A Endoplasmic reticulum t 99.5 1.5E-14 5.3E-19 122.1 4.0 194 50-258 7-207 (369)
225 3g4e_A Regucalcin; six bladed 99.5 3.6E-10 1.2E-14 92.5 29.9 223 83-328 12-261 (297)
226 3c75_H MADH, methylamine dehyd 99.5 3.4E-11 1.1E-15 102.3 23.6 254 10-296 99-405 (426)
227 1npe_A Nidogen, entactin; glyc 99.5 1.2E-09 4.1E-14 87.9 31.8 219 43-266 36-263 (267)
228 1kv9_A Type II quinohemoprotei 99.4 6.5E-11 2.2E-15 107.6 25.6 265 2-296 68-491 (668)
229 1mda_H Methylamine dehydrogena 99.4 2.5E-11 8.7E-16 101.4 19.1 229 63-318 47-366 (368)
230 1fwx_A Nitrous oxide reductase 99.4 1.1E-09 3.9E-14 95.3 29.9 238 46-294 90-432 (595)
231 2ghs_A AGR_C_1268P; regucalcin 99.4 1E-09 3.5E-14 91.0 28.4 216 85-326 50-289 (326)
232 2qe8_A Uncharacterized protein 99.4 2.3E-10 7.8E-15 95.7 24.5 240 32-290 9-318 (343)
233 2ad6_A Methanol dehydrogenase 99.4 3.2E-10 1.1E-14 101.0 26.7 232 2-250 117-503 (571)
234 3iuj_A Prolyl endopeptidase; h 99.4 1.4E-10 4.8E-15 106.3 24.1 236 40-294 126-406 (693)
235 2ad6_A Methanol dehydrogenase 99.4 3.2E-10 1.1E-14 101.0 25.3 270 2-297 64-498 (571)
236 2iwa_A Glutamine cyclotransfer 99.4 1.6E-09 5.4E-14 85.8 26.0 207 73-294 10-238 (266)
237 1w6s_A Methanol dehydrogenase 99.4 1.6E-09 5.5E-14 96.5 29.0 233 2-249 123-511 (599)
238 3dr2_A Exported gluconolactona 99.4 4.1E-10 1.4E-14 92.5 22.8 229 74-329 36-297 (305)
239 1flg_A Protein (quinoprotein e 99.3 1.8E-09 6.1E-14 96.3 27.3 233 49-295 114-518 (582)
240 1kv9_A Type II quinohemoprotei 99.3 3.2E-09 1.1E-13 96.6 28.3 235 2-249 119-496 (668)
241 1mda_H Methylamine dehydrogena 99.3 6E-10 2.1E-14 93.1 20.3 227 11-262 47-365 (368)
242 1flg_A Protein (quinoprotein e 99.3 3.7E-09 1.3E-13 94.3 25.7 248 2-266 119-541 (582)
243 2qe8_A Uncharacterized protein 99.3 7.8E-10 2.7E-14 92.5 20.2 228 84-330 17-312 (343)
244 1fwx_A Nitrous oxide reductase 99.3 7.6E-10 2.6E-14 96.4 20.3 259 55-329 18-408 (595)
245 2ece_A 462AA long hypothetical 99.3 8.9E-09 3E-13 86.8 25.8 214 101-327 97-399 (462)
246 1w6s_A Methanol dehydrogenase 99.3 5.7E-09 1.9E-13 93.0 26.2 269 2-296 64-506 (599)
247 4a2l_A BT_4663, two-component 99.3 6.5E-08 2.2E-12 90.2 34.4 263 45-325 175-468 (795)
248 3iuj_A Prolyl endopeptidase; h 99.3 9.8E-10 3.3E-14 100.7 21.8 193 83-294 128-360 (693)
249 2iwa_A Glutamine cyclotransfer 99.3 1.7E-08 6E-13 79.8 25.9 204 29-242 6-238 (266)
250 3nok_A Glutaminyl cyclase; bet 99.3 5.8E-09 2E-13 81.6 22.7 184 73-266 44-247 (268)
251 2ece_A 462AA long hypothetical 99.2 1.3E-08 4.4E-13 85.8 26.0 214 3-229 99-399 (462)
252 3nol_A Glutamine cyclotransfer 99.2 4E-09 1.4E-13 82.5 20.9 191 121-324 32-240 (262)
253 1npe_A Nidogen, entactin; glyc 99.2 8.3E-08 2.8E-12 77.1 29.6 246 53-320 2-262 (267)
254 3nol_A Glutamine cyclotransfer 99.2 1E-08 3.5E-13 80.2 22.8 184 73-266 32-237 (262)
255 3mbr_X Glutamine cyclotransfer 99.2 5.5E-08 1.9E-12 75.4 26.3 185 73-266 10-216 (243)
256 4a2l_A BT_4663, two-component 99.2 1.8E-07 6E-12 87.3 34.4 263 42-326 309-603 (795)
257 3mbr_X Glutamine cyclotransfer 99.2 4.5E-08 1.6E-12 75.9 23.2 190 121-323 10-218 (243)
258 2fp8_A Strictosidine synthase; 99.2 3.2E-07 1.1E-11 75.8 30.2 231 43-293 19-313 (322)
259 3nok_A Glutaminyl cyclase; bet 99.1 1.5E-08 5E-13 79.3 19.9 189 121-323 44-249 (268)
260 3v9f_A Two-component system se 99.1 6.7E-07 2.3E-11 83.2 32.3 262 42-325 257-555 (781)
261 3v9f_A Two-component system se 99.1 1.5E-06 5.2E-11 80.8 34.6 269 42-330 210-516 (781)
262 3p5b_L Low density lipoprotein 99.1 3.7E-06 1.3E-10 71.5 33.1 217 41-263 110-341 (400)
263 3v65_B Low-density lipoprotein 99.0 1.1E-06 3.7E-11 74.5 28.9 215 42-262 115-338 (386)
264 1ijq_A LDL receptor, low-densi 99.0 4.4E-06 1.5E-10 68.7 32.3 228 3-249 4-246 (316)
265 3v64_C Agrin; beta propeller, 99.0 2.6E-06 8.8E-11 71.1 29.8 214 43-262 73-295 (349)
266 3sov_A LRP-6, low-density lipo 98.9 9.7E-06 3.3E-10 66.6 30.3 237 9-262 12-258 (318)
267 3v65_B Low-density lipoprotein 98.8 2E-05 6.7E-10 66.8 29.6 231 46-294 80-319 (386)
268 2fp8_A Strictosidine synthase; 98.8 1.1E-05 3.8E-10 66.5 27.4 189 44-241 81-313 (322)
269 3m0c_C LDL receptor, low-densi 98.8 2.5E-05 8.7E-10 71.9 31.9 215 42-262 423-652 (791)
270 2p4o_A Hypothetical protein; p 98.8 1.4E-05 4.6E-10 65.5 26.6 232 72-328 22-277 (306)
271 3v64_C Agrin; beta propeller, 98.8 4.5E-05 1.5E-09 63.6 30.9 235 42-294 33-276 (349)
272 4a0p_A LRP6, LRP-6, low-densit 98.8 9.9E-05 3.4E-09 66.5 32.8 227 7-249 12-245 (628)
273 2p4o_A Hypothetical protein; p 98.8 4.6E-05 1.6E-09 62.3 28.5 222 32-266 22-270 (306)
274 3tc9_A Hypothetical hydrolase; 98.6 0.00013 4.4E-09 62.7 28.4 149 44-201 138-301 (430)
275 1k3i_A Galactose oxidase precu 98.6 2.3E-06 8E-11 77.8 18.1 262 51-328 197-530 (656)
276 3amr_A 3-phytase; beta-propell 98.6 6.7E-05 2.3E-09 61.4 24.5 192 53-249 41-272 (355)
277 2xbg_A YCF48-like protein; pho 98.6 0.00015 5.1E-09 59.8 32.3 229 42-291 79-320 (327)
278 4hw6_A Hypothetical protein, I 98.6 5.4E-05 1.9E-09 65.0 25.1 228 44-292 140-432 (433)
279 1ijq_A LDL receptor, low-densi 98.6 0.00017 5.8E-09 59.2 31.3 215 62-294 10-239 (316)
280 2xbg_A YCF48-like protein; pho 98.6 0.0002 6.7E-09 59.1 26.9 262 42-326 35-310 (327)
281 3p5b_L Low density lipoprotein 98.6 0.00026 9E-09 60.1 30.5 224 54-294 85-321 (400)
282 3amr_A 3-phytase; beta-propell 98.5 0.00016 5.4E-09 59.2 23.7 183 101-292 41-262 (355)
283 1n7d_A LDL receptor, low-densi 98.5 4.2E-07 1.4E-11 83.0 9.5 216 43-264 406-636 (699)
284 3qqz_A Putative uncharacterize 98.5 0.00024 8E-09 55.9 26.8 197 77-290 21-250 (255)
285 3sov_A LRP-6, low-density lipo 98.5 0.00039 1.3E-08 57.0 26.9 218 61-295 12-240 (318)
286 3qqz_A Putative uncharacterize 98.4 0.00032 1.1E-08 55.1 28.7 198 36-240 20-252 (255)
287 1k3i_A Galactose oxidase precu 98.4 2.3E-05 8E-10 71.3 19.3 221 47-282 247-530 (656)
288 3s94_A LRP-6, low-density lipo 98.4 0.00055 1.9E-08 61.6 27.0 203 42-249 39-251 (619)
289 3ei3_A DNA damage-binding prot 98.4 0.0019 6.3E-08 62.4 31.9 280 2-294 288-592 (1158)
290 3m0c_C LDL receptor, low-densi 98.4 0.0016 5.5E-08 60.1 31.4 218 61-294 403-633 (791)
291 2xe4_A Oligopeptidase B; hydro 98.4 3.2E-05 1.1E-09 71.5 18.6 187 85-290 175-395 (751)
292 3kya_A Putative phosphatase; s 98.2 0.002 6.7E-08 55.8 27.4 232 45-294 141-476 (496)
293 2xe4_A Oligopeptidase B; hydro 98.2 0.00032 1.1E-08 64.9 22.2 187 44-239 175-398 (751)
294 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0027 9.3E-08 57.2 30.5 219 60-294 13-238 (628)
295 2p9w_A MAL S 1 allergenic prot 98.2 0.0013 4.4E-08 53.4 24.2 200 38-242 8-266 (334)
296 3tc9_A Hypothetical hydrolase; 98.2 0.0021 7.3E-08 55.1 26.1 113 41-161 177-301 (430)
297 4hw6_A Hypothetical protein, I 98.1 0.0011 3.7E-08 56.9 22.0 156 41-205 180-377 (433)
298 3ei3_A DNA damage-binding prot 98.1 0.0076 2.6E-07 58.2 31.9 192 111-315 808-1026(1158)
299 3ott_A Two-component system se 98.1 0.0058 2E-07 56.6 30.2 228 42-294 21-261 (758)
300 3ott_A Two-component system se 98.1 0.0067 2.3E-07 56.2 33.4 256 43-324 103-388 (758)
301 2vpj_A Kelch-like protein 12; 98.1 0.0016 5.3E-08 52.9 21.3 185 47-243 58-280 (301)
302 1n7d_A LDL receptor, low-densi 98.0 3.1E-05 1E-09 70.8 11.3 217 61-295 385-616 (699)
303 3ii7_A Kelch-like protein 7; p 98.0 0.0033 1.1E-07 51.1 21.9 219 3-243 15-274 (306)
304 2ism_A Putative oxidoreductase 98.0 0.0049 1.7E-07 51.3 24.3 222 84-328 31-334 (352)
305 2be1_A Serine/threonine-protei 98.0 0.00042 1.4E-08 56.8 15.7 190 52-246 10-236 (339)
306 2p9w_A MAL S 1 allergenic prot 97.9 0.0057 1.9E-07 49.7 23.1 155 83-242 12-216 (334)
307 2vpj_A Kelch-like protein 12; 97.9 0.0046 1.6E-07 50.1 21.0 221 52-294 15-279 (301)
308 2xn4_A Kelch-like protein 2; s 97.8 0.0075 2.6E-07 48.9 22.0 185 48-243 58-278 (302)
309 3ii7_A Kelch-like protein 7; p 97.8 0.0075 2.6E-07 49.0 21.1 218 54-294 14-273 (306)
310 2ism_A Putative oxidoreductase 97.7 0.014 4.8E-07 48.5 25.0 216 42-266 30-327 (352)
311 3s94_A LRP-6, low-density lipo 97.7 0.025 8.4E-07 50.9 31.2 195 43-243 349-553 (619)
312 2xn4_A Kelch-like protein 2; s 97.7 0.013 4.6E-07 47.3 22.7 221 53-295 17-278 (302)
313 3sre_A PON1, serum paraoxonase 97.6 0.021 7.2E-07 47.3 20.5 175 8-199 81-296 (355)
314 3a9g_A Putative uncharacterize 97.6 0.022 7.5E-07 47.4 24.5 233 83-327 28-330 (354)
315 2xzh_A Clathrin heavy chain 1; 97.6 0.019 6.6E-07 46.4 30.3 212 61-294 86-333 (365)
316 2be1_A Serine/threonine-protei 97.5 0.0012 4E-08 54.2 11.0 142 101-243 11-185 (339)
317 1zgk_A Kelch-like ECH-associat 97.4 0.017 5.7E-07 47.0 17.6 221 52-294 25-288 (308)
318 3kya_A Putative phosphatase; s 97.4 0.05 1.7E-06 47.1 23.2 152 85-240 140-340 (496)
319 1zgk_A Kelch-like ECH-associat 97.4 0.017 5.9E-07 46.9 17.6 184 49-243 68-289 (308)
320 4asc_A Kelch repeat and BTB do 97.4 0.024 8.3E-07 46.2 18.4 217 3-243 8-279 (315)
321 4asc_A Kelch repeat and BTB do 97.4 0.037 1.3E-06 45.1 20.1 178 55-243 8-223 (315)
322 3qhy_B Beta-lactamase inhibito 97.3 0.05 1.7E-06 43.5 20.9 251 44-332 25-277 (282)
323 2uvk_A YJHT; unknown function, 97.2 0.072 2.5E-06 44.2 20.3 223 51-296 19-345 (357)
324 2woz_A Kelch repeat and BTB do 97.2 0.067 2.3E-06 43.6 18.5 181 52-243 57-289 (318)
325 1bpo_A Protein (clathrin); cla 97.2 0.09 3.1E-06 44.4 31.9 212 61-294 85-332 (494)
326 2xzh_A Clathrin heavy chain 1; 97.1 0.08 2.7E-06 42.8 29.0 213 61-295 48-292 (365)
327 2g8s_A Glucose/sorbosone dehyd 97.1 0.1 3.4E-06 43.4 22.4 232 84-325 18-339 (353)
328 3a9g_A Putative uncharacterize 97.0 0.12 4E-06 43.0 28.8 219 42-266 28-324 (354)
329 3sbq_A Nitrous-oxide reductase 97.0 0.17 5.7E-06 44.2 26.5 226 3-241 73-408 (638)
330 2uvk_A YJHT; unknown function, 96.9 0.13 4.5E-06 42.6 20.3 56 193-249 286-350 (357)
331 2woz_A Kelch repeat and BTB do 96.9 0.14 4.7E-06 41.7 21.2 179 54-243 18-233 (318)
332 3pbp_A Nucleoporin NUP82; beta 96.8 0.17 5.9E-06 42.6 19.7 139 140-289 30-208 (452)
333 3pbp_A Nucleoporin NUP82; beta 96.8 0.091 3.1E-06 44.2 15.9 141 178-325 27-196 (452)
334 1tl2_A L10, protein (tachylect 96.7 0.1 3.5E-06 39.6 13.7 134 101-239 5-161 (236)
335 1bpo_A Protein (clathrin); cla 96.5 0.33 1.1E-05 41.1 27.2 215 9-243 85-333 (494)
336 1tl2_A L10, protein (tachylect 96.4 0.036 1.2E-06 42.0 10.0 132 142-287 4-157 (236)
337 1xi4_A Clathrin heavy chain; a 96.4 0.6 2E-05 45.8 19.8 216 60-294 84-332 (1630)
338 2g8s_A Glucose/sorbosone dehyd 96.1 0.51 1.7E-05 39.1 26.7 218 43-266 18-335 (353)
339 3sre_A PON1, serum paraoxonase 95.7 0.72 2.5E-05 38.1 24.5 183 60-249 81-308 (355)
340 3das_A Putative oxidoreductase 95.6 0.79 2.7E-05 37.7 28.1 227 83-327 31-326 (347)
341 2zwa_A Leucine carboxyl methyl 95.4 1.6 5.5E-05 39.9 21.2 154 45-205 443-639 (695)
342 2zwa_A Leucine carboxyl methyl 95.2 1.9 6.3E-05 39.5 20.4 188 50-243 396-637 (695)
343 1xi4_A Clathrin heavy chain; a 95.1 1.8 6.1E-05 42.7 17.6 193 43-242 106-332 (1630)
344 3das_A Putative oxidoreductase 95.0 1.3 4.4E-05 36.5 30.5 223 37-266 26-320 (347)
345 3qhy_B Beta-lactamase inhibito 94.9 1.2 4E-05 35.5 16.7 204 9-242 41-247 (282)
346 3sbq_A Nitrous-oxide reductase 93.3 3.9 0.00013 35.9 24.3 230 54-294 72-409 (638)
347 1cru_A Protein (soluble quinop 91.7 5.8 0.0002 34.0 20.5 59 131-189 27-97 (454)
348 4gq2_M Nucleoporin NUP120; bet 89.4 12 0.00042 35.6 15.1 39 132-170 237-275 (950)
349 1cru_A Protein (soluble quinop 87.7 12 0.00043 32.0 21.3 103 42-150 26-163 (454)
350 4d9s_A UVB-resistance protein 86.1 14 0.00049 31.0 33.1 266 5-293 30-357 (406)
351 3s25_A Hypothetical 7-bladed b 85.3 13 0.00044 29.8 20.4 160 109-293 36-216 (302)
352 3kci_A Probable E3 ubiquitin-p 85.1 15 0.00053 30.5 31.1 270 3-293 13-345 (389)
353 4gq2_M Nucleoporin NUP120; bet 85.1 13 0.00045 35.4 12.6 39 84-127 236-274 (950)
354 3uc1_A DNA gyrase subunit A; D 83.6 16 0.00056 29.6 22.1 112 42-161 94-228 (327)
355 1zi0_A DNA gyrase subunit A; b 83.6 16 0.00054 29.4 18.2 179 141-330 2-217 (307)
356 3f7f_A Nucleoporin NUP120; nuc 79.3 3.5 0.00012 37.4 6.1 38 43-80 222-259 (729)
357 3uc1_A DNA gyrase subunit A; D 77.0 28 0.00096 28.2 24.6 226 53-293 4-279 (327)
358 3no0_A DNA gyrase subunit A; D 76.7 26 0.00088 27.6 20.9 194 83-293 23-246 (276)
359 3kci_A Probable E3 ubiquitin-p 76.3 32 0.0011 28.6 28.6 229 5-241 67-345 (389)
360 4d9s_A UVB-resistance protein 76.1 34 0.0012 28.7 31.9 232 42-293 15-305 (406)
361 4fhn_B Nucleoporin NUP120; pro 74.4 22 0.00075 34.7 10.6 38 85-127 239-276 (1139)
362 4fhn_B Nucleoporin NUP120; pro 74.1 14 0.00046 36.1 9.0 40 132-171 239-278 (1139)
363 3mvd_K Regulator of chromosome 73.6 40 0.0014 28.4 25.6 262 45-330 26-375 (423)
364 3b7f_A Glycosyl hydrolase, BNR 66.6 54 0.0019 27.1 25.4 210 2-229 24-297 (394)
365 3s25_A Hypothetical 7-bladed b 64.2 54 0.0018 26.2 27.6 181 46-249 58-262 (302)
366 3f7f_A Nucleoporin NUP120; nuc 63.5 13 0.00045 33.8 6.0 36 213-249 223-258 (729)
367 4a9v_A PHOX; hydrolase, beta-p 63.0 50 0.0017 29.2 9.3 61 84-149 476-549 (592)
368 3zwu_A Alkaline phosphatase PH 62.8 36 0.0012 30.3 8.6 58 86-148 478-548 (592)
369 2wg3_C Hedgehog-interacting pr 62.2 75 0.0026 27.2 27.0 103 84-191 14-158 (463)
370 4a9v_A PHOX; hydrolase, beta-p 55.0 85 0.0029 27.8 9.3 58 132-189 477-548 (592)
371 3zwu_A Alkaline phosphatase PH 53.6 69 0.0024 28.5 8.8 58 132-189 477-548 (592)
372 3q6k_A 43.2 kDa salivary prote 51.7 1E+02 0.0035 25.6 22.1 131 111-241 124-306 (381)
373 3mvd_K Regulator of chromosome 50.8 1.1E+02 0.0038 25.6 36.2 296 7-328 40-419 (423)
374 1suu_A DNA gyrase subunit A; t 50.6 96 0.0033 24.9 28.4 183 52-240 8-230 (312)
375 1zi0_A DNA gyrase subunit A; b 45.3 1.2E+02 0.004 24.3 28.4 223 53-293 4-277 (307)
376 3no0_A DNA gyrase subunit A; D 40.9 1.3E+02 0.0044 23.6 21.1 189 43-240 24-245 (276)
377 2wg3_C Hedgehog-interacting pr 36.9 2E+02 0.0068 24.6 28.2 105 43-152 14-160 (463)
378 1a12_A RCC1, regulator of chro 30.3 2.4E+02 0.0081 23.5 33.1 257 7-293 24-365 (413)
379 1suu_A DNA gyrase subunit A; t 28.7 2.2E+02 0.0076 22.7 25.7 191 3-201 11-231 (312)
380 1q47_A Semaphorin 3A; beta pro 26.8 2.1E+02 0.0072 24.8 7.4 56 224-288 423-487 (495)
381 2zux_A YESW protein; beta-prop 26.6 3.4E+02 0.012 24.1 22.9 205 63-295 293-534 (591)
382 1q47_A Semaphorin 3A; beta pro 25.8 2.3E+02 0.008 24.5 7.5 56 101-156 422-487 (495)
383 1zvt_A Topoisomerase IV subuni 25.0 2.4E+02 0.0081 21.7 15.8 139 144-293 4-163 (256)
384 1sqj_A OXG-RCBH, oligoxylogluc 24.5 4.3E+02 0.015 24.5 21.6 147 83-234 14-194 (789)
385 3mez_B Mannose-specific lectin 24.1 1.5E+02 0.0052 19.2 10.6 61 52-119 24-84 (113)
386 2zux_A YESW protein; beta-prop 23.7 3.9E+02 0.013 23.7 20.0 171 111-295 152-402 (591)
387 3b7f_A Glycosyl hydrolase, BNR 23.6 3E+02 0.01 22.5 25.3 204 52-265 22-289 (394)
388 3al9_A Plexin-A2; beta-propell 23.4 2.5E+02 0.0086 24.6 7.3 69 85-156 401-476 (539)
389 4gz8_A Semaphorin-3A; multi-do 21.8 3.3E+02 0.011 24.7 7.8 56 101-156 430-495 (667)
390 3l6v_A GYRA, DNA gyrase subuni 21.5 3.4E+02 0.012 22.3 28.1 226 52-293 7-316 (370)
391 3q6k_A 43.2 kDa salivary prote 21.2 3.6E+02 0.012 22.4 22.7 138 63-201 124-306 (381)
392 3of7_A Regulator of chromosome 21.1 3.9E+02 0.013 22.7 25.3 186 42-237 147-401 (473)
393 4hvt_A Ritya.17583.B, post-pro 21.0 4.8E+02 0.016 23.9 23.5 228 45-292 134-429 (711)
394 3s9j_A Member of DUF4221 famil 21.0 3.5E+02 0.012 22.3 7.4 59 190-249 48-117 (369)
395 3al9_A Plexin-A2; beta-propell 20.7 3.3E+02 0.011 23.9 7.5 67 43-114 400-476 (539)
396 4gz8_A Semaphorin-3A; multi-do 20.4 4.9E+02 0.017 23.7 9.3 66 43-114 412-495 (667)
397 1a12_A RCC1, regulator of chro 20.2 3.7E+02 0.013 22.2 27.7 187 43-241 111-365 (413)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.1e-47 Score=314.56 Aligned_cols=265 Identities=19% Similarity=0.256 Sum_probs=244.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.|+.|++|++... .......+.+|...|.+++|+ +.++++++.|+.|++||+.+++.+..+.
T Consensus 50 ~l~tgs~D~~v~vW~~~~~----------~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~ 119 (321)
T 3ow8_A 50 TVVTGSLDDLVKVWKWRDE----------RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSID 119 (321)
T ss_dssp EEEEEETTSCEEEEEEETT----------EEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEEcCCCCEEEEECCCC----------CeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEe
Confidence 4899999999999999761 234556788999999999999 7899999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
.+ ...+.+++|+|++ ++|++|+.||.|++||+++++....+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 120 ~~-~~~~~~~~~spdg-----~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~ 193 (321)
T 3ow8_A 120 AG-PVDAWTLAFSPDS-----QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 193 (321)
T ss_dssp CC-TTCCCCEEECTTS-----SEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CC-CccEEEEEECCCC-----CEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 88 8899999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEE
Q 019326 160 VRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSIT 235 (343)
Q Consensus 160 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~ 235 (343)
++++.+.... +...+.+++|+|++++++++ .|+.|++||+++++....+. |...|.+++|++ +.+|++++.|+.|+
T Consensus 194 ~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~ 273 (321)
T 3ow8_A 194 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVK 273 (321)
T ss_dssp TTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 9998776654 45789999999999999999 89999999999999888887 788899999994 67999999999999
Q ss_pred EEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 236 i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+||+++++++..+. +|...|.+++|++++. +|++++.||.|++||..
T Consensus 274 iwd~~~~~~~~~~~-~h~~~v~~v~~s~~g~---------~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 274 VWDVGTRTCVHTFF-DHQDQVWGVKYNGNGS---------KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEETTTTEEEEEEC-CCSSCEEEEEECTTSS---------EEEEEETTCCEEEEECC
T ss_pred EEeCCCCEEEEEEc-CCCCcEEEEEECCCCC---------EEEEEeCCCeEEEEeCC
Confidence 99999999999998 9999999999999887 99999999999999964
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.5e-47 Score=328.77 Aligned_cols=282 Identities=20% Similarity=0.299 Sum_probs=255.9
Q ss_pred eEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeE
Q 019326 35 LFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFV 112 (343)
Q Consensus 35 ~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 112 (343)
...+.+|.++|++++|+ +.+|++|+.||.|++||+.+++....+.+| ...|.+++|+|++ ++|++|+.|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h-~~~V~~v~~~~~~-----~~l~sgs~D~~i 174 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGH-TDSVQDISFDHSG-----KLLASCSADMTI 174 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCC-SSCEEEEEECTTS-----SEEEEEETTSCC
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEecc-CCcEEEEEEcCCC-----CEEEEEeCCCeE
Confidence 45677999999999999 789999999999999999999999999999 9999999999998 899999999999
Q ss_pred EEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-e
Q 019326 113 SIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-T 190 (343)
Q Consensus 113 ~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~ 190 (343)
++||+.+++++..+.+|...|.+++|+|++++|++++.|++|++||++++..+..+. +...+..+.++|++.+++++ .
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~ 254 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcC
Confidence 999999999999999999999999999999999999999999999999998776554 45678999999999999999 8
Q ss_pred CCcEEEEEcccceeEEEec-CCcceEEeeecC---------------------CCeEEEEeCCCcEEEEECCCCceeEEe
Q 019326 191 EEKVGIHQAEDAKLLCELD-GKKRILCAAPGE---------------------NGVLFTGGEDRSITAWDTNSGKVAYCI 248 (343)
Q Consensus 191 ~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~---------------------~~~l~~~~~dg~i~i~d~~~~~~~~~~ 248 (343)
|+.|++||+.+++....+. |...|.+++|++ +.+|++|+.|+.|++||+++++++..+
T Consensus 255 D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~ 334 (410)
T 1vyh_C 255 DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 (410)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 9999999999999888886 788999999985 458999999999999999999999999
Q ss_pred cccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccC
Q 019326 249 EDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIG 328 (343)
Q Consensus 249 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~ 328 (343)
. +|...|++++|+|++. +|++++.||.|++||++++.... .. ..+...|.+++|+|++.+++.+..
T Consensus 335 ~-~h~~~v~~v~~~~~g~---------~l~s~s~D~~i~vwd~~~~~~~~---~~-~~h~~~v~~l~~~~~~~~l~sgs~ 400 (410)
T 1vyh_C 335 V-GHDNWVRGVLFHSGGK---------FILSCADDKTLRVWDYKNKRCMK---TL-NAHEHFVTSLDFHKTAPYVVTGSV 400 (410)
T ss_dssp E-CCSSCEEEEEECSSSS---------CEEEEETTTEEEEECCTTSCCCE---EE-ECCSSCEEEEEECSSSSCEEEEET
T ss_pred E-CCCCcEEEEEEcCCCC---------EEEEEeCCCeEEEEECCCCceEE---EE-cCCCCcEEEEEEcCCCCEEEEEeC
Confidence 8 9999999999999887 99999999999999998764221 11 234567999999999999999999
Q ss_pred CCCCCCcc
Q 019326 329 DSAPKGEE 336 (343)
Q Consensus 329 ~~~~~~~~ 336 (343)
|+.++.++
T Consensus 401 D~~i~vW~ 408 (410)
T 1vyh_C 401 DQTVKVWE 408 (410)
T ss_dssp TSEEEEEC
T ss_pred CCcEEEEe
Confidence 99877665
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.8e-46 Score=310.80 Aligned_cols=279 Identities=15% Similarity=0.177 Sum_probs=242.8
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
+....++.+|.+.|++++|+ +.+|++|+.||.|++||+.+++.+..+..| ..+|.+++|+|++ ++|++|+.|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~-~~~v~~~~~~~~~-----~~l~s~s~d 76 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVT-ETPVRAGKFIARK-----NWIIVGSDD 76 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEEEGGG-----TEEEEEETT
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeecc-CCcEEEEEEeCCC-----CEEEEECCC
Confidence 34556778999999999999 889999999999999999999999999999 8999999999998 899999999
Q ss_pred CeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEE--EEcCCcceEEEEeC-CCCEE
Q 019326 110 GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFY--HKIGKEASLIKFDG-SGEKF 186 (343)
Q Consensus 110 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~ 186 (343)
++|++||+.+++++..+.+|...|.+++|+|++++|++++.|++|++||++++..... ..+...+.+++|+| ++..+
T Consensus 77 ~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEE
T ss_pred CEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEE
Confidence 9999999999999999999999999999999999999999999999999998754432 23567899999999 57888
Q ss_pred EEE-eCCcEEEEEcccceeEEEec--CCcceEEeeec---CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEE
Q 019326 187 FMV-TEEKVGIHQAEDAKLLCELD--GKKRILCAAPG---ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIV 260 (343)
Q Consensus 187 ~~~-~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~ 260 (343)
+++ .|+.|++||+++......+. +...+..+.+. ++.+|++|+.|+.|++||+++++++..+. +|...|.+++
T Consensus 157 ~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~h~~~v~~~~ 235 (304)
T 2ynn_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE-GHMSNVSFAV 235 (304)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEE
T ss_pred EEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC-CCCCCEEEEE
Confidence 888 89999999998877665554 55778888886 34699999999999999999999999999 9999999999
Q ss_pred EEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCc--eeccccCCC
Q 019326 261 VLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKS--FKRPQIGDS 330 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~~~~~~~~~ 330 (343)
|+|++. +|++++.||+|++||+++++...... .+...+.+++++|++. +++.+..++
T Consensus 236 ~~p~~~---------~l~s~s~Dg~i~iWd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~asg~~~g 294 (304)
T 2ynn_A 236 FHPTLP---------IIISGSEDGTLKIWNSSTYKVEKTLN----VGLERSWCIATHPTGRKNYIASGFDNG 294 (304)
T ss_dssp ECSSSS---------EEEEEETTSCEEEEETTTCCEEEEEC----CSSSSEEEEEECTTCGGGCEEEEETTE
T ss_pred ECCCCC---------EEEEEcCCCeEEEEECCCCceeeecc----CCCccEEEEEECCCCCceEEEEecCCc
Confidence 999987 99999999999999999875332221 2345799999888765 567766655
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.4e-47 Score=325.79 Aligned_cols=263 Identities=15% Similarity=0.231 Sum_probs=241.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.||.|++||+.+ ......+.+|.++|++++|+ +++|++|+.|++|++||+.+++++..+.
T Consensus 122 ~l~s~s~Dg~i~vwd~~~------------~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~ 189 (410)
T 1vyh_C 122 VMVSASEDATIKVWDYET------------GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH 189 (410)
T ss_dssp EEEEEESSSCEEEEETTT------------CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC
T ss_pred EEEEEeCCCeEEEEECCC------------CcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc
Confidence 489999999999999987 23456778999999999998 8899999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
+| ...|.+++|+|++ ++|++|+.|++|++||+++++++..+.+|...|.+++|+|++.+|++++.|+.|++||+
T Consensus 190 ~h-~~~V~~v~~~p~~-----~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 190 GH-DHNVSSVSIMPNG-----DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263 (410)
T ss_dssp CC-SSCEEEEEECSSS-----SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CC-CCCEEEEEEeCCC-----CEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 99 8999999999998 79999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeEEE-EcCCcceEEEEeCC--------------------CCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEE
Q 019326 160 VRGRRSFYH-KIGKEASLIKFDGS--------------------GEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILC 216 (343)
Q Consensus 160 ~~~~~~~~~-~~~~~~~~~~~~~~--------------------~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~ 216 (343)
++++..... .+...+.+++|+|+ +.+++++ .|+.|++||+++++.+..+. |...|.+
T Consensus 264 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~ 343 (410)
T 1vyh_C 264 ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343 (410)
T ss_dssp TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEE
Confidence 998876554 45578999999996 6688888 89999999999999988887 7888999
Q ss_pred eeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 217 AAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 217 ~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
++|++ +.+|++|+.||.|++||+.+++.+..+. +|...|++++|+|++. +|++|+.||+|++|+++
T Consensus 344 v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~---------~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHFVTSLDFHKTAP---------YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE-CCSSCEEEEEECSSSS---------CEEEEETTSEEEEEC--
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc-CCCCcEEEEEEcCCCC---------EEEEEeCCCcEEEEeCC
Confidence 99984 6799999999999999999999999998 9999999999999987 99999999999999974
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.7e-46 Score=310.92 Aligned_cols=286 Identities=17% Similarity=0.154 Sum_probs=254.5
Q ss_pred eEEeEEecCCCCCeEEEEec------CceEEEeeCCCeEEEEEcCCCee--eeEeccCCCCCeEEEEEeCCCCCCCCceE
Q 019326 32 LTQLFSYPAHLSPITTVAVS------GTAAASGGTDDTIHLYDLSTSSS--LGAIHHHESSSVTSLAFYTPQNLSVPRNL 103 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~------~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~l~~~~~~~~~~~~~l 103 (343)
......+++|.++|.+++|+ +.+|++|+.|++|++|++.+++. ...+.+| ...|.+++|++++ .++
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh-~~~v~~~~~~~~~-----~~l 95 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGH-QLGVVSVDISHTL-----PIA 95 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECSSS-----SEE
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccC-CCCEEEEEECCCC-----CEE
Confidence 34456677999999999996 45899999999999999987754 4567888 9999999999998 799
Q ss_pred EEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-CCcceEEEEeCC
Q 019326 104 FSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-GKEASLIKFDGS 182 (343)
Q Consensus 104 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~ 182 (343)
++++.|++|++||+.+++.+..+..|...+.+++|+|++++|++++.|+.|++||+++++....... ...+.+++|+|+
T Consensus 96 ~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spd 175 (321)
T 3ow8_A 96 ASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPD 175 (321)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTT
T ss_pred EEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999999999999987765554 467899999999
Q ss_pred CCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEE
Q 019326 183 GEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGI 259 (343)
Q Consensus 183 ~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~ 259 (343)
+++++++ .|+.|++||+++++.+..+. |..+|.+++|++ +.+|++|+.|+.|++||+++++....+. +|...|.++
T Consensus 176 g~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~ 254 (321)
T 3ow8_A 176 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS-GHASWVLNV 254 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC-CCSSCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc-CCCCceEEE
Confidence 9999999 89999999999999998887 788999999995 5799999999999999999999999998 999999999
Q ss_pred EEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 260 VVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
+|+|++. +|++++.|++|++||++++..... ...+...|.+++|++++.+++.+..|+.++.++.
T Consensus 255 ~~sp~~~---------~l~s~s~D~~v~iwd~~~~~~~~~----~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 255 AFCPDDT---------HFVSSSSDKSVKVWDVGTRTCVHT----FFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EECTTSS---------EEEEEETTSCEEEEETTTTEEEEE----ECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EECCCCC---------EEEEEeCCCcEEEEeCCCCEEEEE----EcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 9999887 999999999999999998753221 1235567999999999999999999998887764
No 6
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7e-46 Score=335.42 Aligned_cols=307 Identities=18% Similarity=0.207 Sum_probs=254.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.|+.|++||..+ .+....+.+|...|++++|+ +++|++|+.|++|++||+.+++.+..+.
T Consensus 162 ~l~s~s~D~~v~lwd~~~------------~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~ 229 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPP------------FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFE 229 (611)
T ss_dssp EEEEEETTSCEEEEETTT------------BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECB
T ss_pred EEEEEeCCCeEEEEECCC------------CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeec
Confidence 589999999999999765 45567788999999999999 8899999999999999999999888874
Q ss_pred -------cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceee----------------------------
Q 019326 80 -------HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLT---------------------------- 124 (343)
Q Consensus 80 -------~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~---------------------------- 124 (343)
+| ...|.+++|+|++ ++|++++.|++|++||+.+++++.
T Consensus 230 ~~~~~~~~h-~~~V~~v~~spdg-----~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 230 DDSLKNVAH-SGSVFGLTWSPDG-----TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp CTTSSSCSS-SSCEEEEEECTTS-----SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred ccccccccc-CCCEEEEEECCCC-----CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 67 8999999999999 899999999999999998766543
Q ss_pred ---------------eeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE---------------------
Q 019326 125 ---------------SVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH--------------------- 168 (343)
Q Consensus 125 ---------------~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~--------------------- 168 (343)
.+.+|...|.+++|+|++++|++++.|++|++||+.+++.....
T Consensus 304 ~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s 383 (611)
T 1nr0_A 304 GFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT 383 (611)
T ss_dssp CCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEE
T ss_pred CcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEE
Confidence 33468889999999999999999999999999998765432110
Q ss_pred --------------------------------------------------------------EcCCcceEEEEeCCCCEE
Q 019326 169 --------------------------------------------------------------KIGKEASLIKFDGSGEKF 186 (343)
Q Consensus 169 --------------------------------------------------------------~~~~~~~~~~~~~~~~~~ 186 (343)
.+...+.+++|+|+++++
T Consensus 384 ~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~l 463 (611)
T 1nr0_A 384 VSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFV 463 (611)
T ss_dssp EETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEE
T ss_pred EEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEE
Confidence 012335679999999999
Q ss_pred EEE-eCCcEEEEEccccee--EEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCC-CceeEE-ecccccccEEEEE
Q 019326 187 FMV-TEEKVGIHQAEDAKL--LCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNS-GKVAYC-IEDAHSARVKGIV 260 (343)
Q Consensus 187 ~~~-~~~~i~~~d~~~~~~--~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~-~~~~~~-~~~~h~~~v~~~~ 260 (343)
+++ .|+.|++||+.++.. .....|...|.+++|+ ++++|++++.|+.|++||+.+ ++.... ...+|...|.+++
T Consensus 464 asgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~ 543 (611)
T 1nr0_A 464 AVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVS 543 (611)
T ss_dssp EEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEE
T ss_pred EEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEE
Confidence 999 899999999987653 3445589999999999 467999999999999999987 555443 2325999999999
Q ss_pred EEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 261 VLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
|+|++. +|++++.|++|++||+.++.... ......+....|.+++|+|++. ++.+..|+.++.++.
T Consensus 544 fspdg~---------~lasgs~D~~v~lW~~~~~~~~~-~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 544 WSPDNV---------RLATGSLDNSVIVWNMNKPSDHP-IIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp ECTTSS---------EEEEEETTSCEEEEETTCTTSCC-EEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred ECCCCC---------EEEEEECCCcEEEEECCCccccc-chhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 999988 99999999999999998753211 0122222256799999999999 888999998887654
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6e-45 Score=306.38 Aligned_cols=260 Identities=18% Similarity=0.245 Sum_probs=236.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC----eee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS----SSL 75 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~----~~~ 75 (343)
.|++|+.||.|++||+.. ...+..+..|...|.+++|+ +++|++|+.|+.|++|++.+. +..
T Consensus 69 ~l~s~s~Dg~v~iWd~~~------------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~ 136 (340)
T 1got_B 69 LLLSASQDGKLIIWDSYT------------TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVS 136 (340)
T ss_dssp EEEEEETTTEEEEEETTT------------CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEE
T ss_pred EEEEEeCCCcEEEEECCC------------CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeE
Confidence 489999999999999876 34556677899999999999 899999999999999999875 355
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEE
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLA 155 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~ 155 (343)
..+.+| ...|.++.|++++ .+++++.|++|++||+.+++++..+.+|.+.|.+++|+|+++++++++.|+.|+
T Consensus 137 ~~~~~h-~~~v~~~~~~~~~------~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~ 209 (340)
T 1got_B 137 RELAGH-TGYLSCCRFLDDN------QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209 (340)
T ss_dssp EEEECC-SSCEEEEEEEETT------EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEecCC-CccEEEEEECCCC------cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 677888 8999999999887 699999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCC---cceEEeeecC-CCeEEEEe
Q 019326 156 MVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGK---KRILCAAPGE-NGVLFTGG 229 (343)
Q Consensus 156 ~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~---~~i~~~~~~~-~~~l~~~~ 229 (343)
+||+++++...... +...+.+++|+|++++++++ .|+.|++||+++++.+..+.+. ..+.+++|++ +.+|++|+
T Consensus 210 ~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 289 (340)
T 1got_B 210 LWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY 289 (340)
T ss_dssp EEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEEC
Confidence 99999998776554 56789999999999999999 8999999999999888887754 4799999994 67999999
Q ss_pred CCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 230 EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 230 ~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
.||.|++||+.+++.+..+. +|..+|.+++|+|++. +|++|+.||.|+|||
T Consensus 290 ~d~~i~vwd~~~~~~~~~~~-~h~~~v~~~~~s~dg~---------~l~s~s~D~~i~iWd 340 (340)
T 1got_B 290 DDFNCNVWDALKADRAGVLA-GHDNRVSCLGVTDDGM---------AVATGSWDSFLKIWN 340 (340)
T ss_dssp TTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSS---------CEEEEETTSCEEEEC
T ss_pred CCCeEEEEEcccCcEeeEee-cCCCcEEEEEEcCCCC---------EEEEEcCCccEEecC
Confidence 99999999999999999998 9999999999999887 999999999999997
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2e-44 Score=303.20 Aligned_cols=285 Identities=14% Similarity=0.121 Sum_probs=249.5
Q ss_pred eeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC
Q 019326 31 TLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA 108 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~ 108 (343)
.......+.+|.++|++++|+ +++|++|+.||.|++||+.+++.+..+..| ...|.+++|+|++ ++|++|+.
T Consensus 44 ~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~-~~~v~~~~~s~~~-----~~l~s~~~ 117 (340)
T 1got_B 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLR-SSWVMTCAYAPSG-----NYVACGGL 117 (340)
T ss_dssp CCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECS-SSCEEEEEECTTS-----SEEEEEET
T ss_pred cchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecC-CccEEEEEECCCC-----CEEEEEeC
Confidence 355677889999999999998 889999999999999999999999999998 8999999999999 89999999
Q ss_pred CCeEEEEECCCc----ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCC
Q 019326 109 DGFVSIFDADPF----VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSG 183 (343)
Q Consensus 109 dg~i~iwd~~~~----~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~ 183 (343)
|+.|++|++.+. +....+.+|.+.|.++.|++++. +++++.|++|++||+++++...... +...+.+++|+|++
T Consensus 118 d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~ 196 (340)
T 1got_B 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT 196 (340)
T ss_dssp TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred CCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCC
Confidence 999999999764 35567788999999999998874 8999999999999999998776654 55789999999999
Q ss_pred CEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecc-cccccEEEE
Q 019326 184 EKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIED-AHSARVKGI 259 (343)
Q Consensus 184 ~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~h~~~v~~~ 259 (343)
++++++ .|+.|++||+++++....+. |...|.+++|++ +++|++|+.||.|++||+++++.+..+.. .+...|.++
T Consensus 197 ~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 276 (340)
T 1got_B 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276 (340)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEE
Confidence 999999 89999999999999988887 788999999994 67999999999999999999988877751 233579999
Q ss_pred EEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCc
Q 019326 260 VVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~ 335 (343)
+|+|++. +|++|+.||.|++||+.++..... ...+...|.+++|+|++.+++.+..|+.++.+
T Consensus 277 ~~s~~g~---------~l~~g~~d~~i~vwd~~~~~~~~~----~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 277 SFSKSGR---------LLLAGYDDFNCNVWDALKADRAGV----LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp EECTTSS---------EEEEEETTSEEEEEETTTCCEEEE----EECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred EECCCCC---------EEEEECCCCeEEEEEcccCcEeeE----eecCCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 9999887 999999999999999987642211 12355689999999999999999999887654
No 9
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.9e-44 Score=324.03 Aligned_cols=285 Identities=12% Similarity=0.132 Sum_probs=237.6
Q ss_pred EEecCCCCCeEEEEec--Cc-eEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeE
Q 019326 36 FSYPAHLSPITTVAVS--GT-AAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFV 112 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 112 (343)
..+.+|...|++++|+ +. .|++|+.|++|++||..++++...+.+| ...|.+++|+|++ ++|++|+.|++|
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H-~~~V~~v~fspdg-----~~las~s~D~~i 214 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH-TKFVHSVRYNPDG-----SLFASTGGDGTI 214 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC-SSCEEEEEECTTS-----SEEEEEETTSCE
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccc-cCceEEEEECCCC-----CEEEEEECCCcE
Confidence 3467899999999999 33 6999999999999999999999999999 9999999999999 899999999999
Q ss_pred EEEECCCcceeeeee-------eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE-----------------
Q 019326 113 SIFDADPFVLLTSVK-------VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH----------------- 168 (343)
Q Consensus 113 ~iwd~~~~~~~~~~~-------~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~----------------- 168 (343)
++||+.+++++..+. +|.+.|.+++|+|++++|++++.|++|++||+++++.....
T Consensus 215 ~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (611)
T 1nr0_A 215 VLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTK 294 (611)
T ss_dssp EEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECS
T ss_pred EEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcC
Confidence 999999988888874 79999999999999999999999999999999887654332
Q ss_pred ---------------------------EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEe------------
Q 019326 169 ---------------------------KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCEL------------ 208 (343)
Q Consensus 169 ---------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~------------ 208 (343)
.+...+.+++|+|++++++++ .|+.|++||+.+++....+
T Consensus 295 ~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~ 374 (611)
T 1nr0_A 295 QALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 374 (611)
T ss_dssp SCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEE
T ss_pred CEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEE
Confidence 234568899999999999999 8999999998765443221
Q ss_pred -----------------------------------------------------------------------cCCcceEEe
Q 019326 209 -----------------------------------------------------------------------DGKKRILCA 217 (343)
Q Consensus 209 -----------------------------------------------------------------------~~~~~i~~~ 217 (343)
.+...+.++
T Consensus 375 ~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~v 454 (611)
T 1nr0_A 375 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCV 454 (611)
T ss_dssp ECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEE
T ss_pred ECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEE
Confidence 112345678
Q ss_pred eec-CCCeEEEEeCCCcEEEEECCCCce--eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC-
Q 019326 218 APG-ENGVLFTGGEDRSITAWDTNSGKV--AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM- 293 (343)
Q Consensus 218 ~~~-~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~- 293 (343)
+|+ ++++|++|+.|+.|++||+.++.. +.. . +|...|++++|+|++. +|++++.|++|++|++.+
T Consensus 455 a~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~-~h~~~v~~v~fspdg~---------~las~s~d~~v~~w~~~~~ 523 (611)
T 1nr0_A 455 ALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-I-VHPAEITSVAFSNNGA---------FLVATDQSRKVIPYSVANN 523 (611)
T ss_dssp EECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-E-ECSSCEEEEEECTTSS---------EEEEEETTSCEEEEEGGGT
T ss_pred EEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-c-CCCCceEEEEECCCCC---------EEEEEcCCCCEEEEEcCCC
Confidence 887 467999999999999999987653 233 4 7999999999999988 999999999999999987
Q ss_pred ccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 294 AIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 294 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
+..... .. ...+...|.+++|+|++++++.+..|+.++.++...
T Consensus 524 ~~~~~~-~~-~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 524 FELAHT-NS-WTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp TEESCC-CC-CCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred Cceeee-ee-eeecccceeEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 322111 01 112566799999999999999999999888776543
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.7e-44 Score=296.89 Aligned_cols=290 Identities=13% Similarity=0.116 Sum_probs=246.7
Q ss_pred eeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCC-----CeeeeEeccCCCCCeEEEEEeCCCCCCCCce
Q 019326 31 TLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLST-----SSSLGAIHHHESSSVTSLAFYTPQNLSVPRN 102 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~ 102 (343)
.+....++.+|.++|++++|+ +++|++|+.|++|++|++.. +.++..+.+| ...|.+++|+|++ ++
T Consensus 6 ~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h-~~~v~~~~~s~dg-----~~ 79 (319)
T 3frx_A 6 VLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGH-SHIVQDCTLTADG-----AY 79 (319)
T ss_dssp EEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECC-SSCEEEEEECTTS-----SE
T ss_pred EEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCC-cccEEEEEECCCC-----CE
Confidence 356677889999999999998 47999999999999999864 3456788899 9999999999999 89
Q ss_pred EEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCC
Q 019326 103 LFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGS 182 (343)
Q Consensus 103 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||++.........+...+..+.+.|.
T Consensus 80 l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC
T ss_pred EEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccC
Confidence 99999999999999999999999999999999999999999999999999999999976555445556678999999985
Q ss_pred C------CEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEeccccc
Q 019326 183 G------EKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHS 253 (343)
Q Consensus 183 ~------~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~ 253 (343)
. ..++++ .|+.|++||+++.+....+. |...|.++++++ +.+|++|+.||.|++||+.+++.+..+. +.
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~ 237 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS--AQ 237 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--CC
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec--CC
Confidence 4 478888 89999999999998888776 889999999995 6799999999999999999999998887 45
Q ss_pred ccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCC----CcccccccccceeEEEcCCCCceeccccCC
Q 019326 254 ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKP----LPLAEAKTNSRLTCLAGSSTKSFKRPQIGD 329 (343)
Q Consensus 254 ~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~----~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~ 329 (343)
..|.+++|+|++. +|++++.+ .+++|+++....... ...........+.+++|+|++++++.+..|
T Consensus 238 ~~v~~~~~sp~~~---------~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~D 307 (319)
T 3frx_A 238 DEVFSLAFSPNRY---------WLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTD 307 (319)
T ss_dssp SCEEEEEECSSSS---------EEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEEcCCCC---------EEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecC
Confidence 7899999999987 88877754 599999987532111 111112334568999999999999999999
Q ss_pred CCCCCcccc
Q 019326 330 SAPKGEEKA 338 (343)
Q Consensus 330 ~~~~~~~~~ 338 (343)
+.++.++..
T Consensus 308 g~i~vWd~~ 316 (319)
T 3frx_A 308 NVIRVWQVM 316 (319)
T ss_dssp SCEEEEEEE
T ss_pred ceEEEEEEe
Confidence 988877653
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.1e-45 Score=305.77 Aligned_cols=276 Identities=13% Similarity=0.082 Sum_probs=221.4
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEe---
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAI--- 78 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~--- 78 (343)
+++++.|+++++||................ .......|...|++++|+ .+.|++|+.||.|++||+.+++.+..+
T Consensus 44 ~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~ 122 (344)
T 4gqb_B 44 LLLGASSLSGRCWAGSLWLFKDPCAAPNEG-FCSAGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFC 122 (344)
T ss_dssp EEEEEECCSSSCCCEEEEEESSGGGTTCGG-GCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEE
T ss_pred EEEEEeCCceEEeeceeeeeccccccCCcc-eeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeecc
Confidence 455566888888875321000000000000 111122467889999999 778999999999999999998765443
Q ss_pred -ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEE
Q 019326 79 -HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAM 156 (343)
Q Consensus 79 -~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~ 156 (343)
.+| ...|++++|+|++ ++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++ .+|++++.|++|++
T Consensus 123 ~~~H-~~~V~~v~~spdg-----~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~i 196 (344)
T 4gqb_B 123 KYEH-DDIVSTVSVLSSG-----TQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILL 196 (344)
T ss_dssp EECC-SSCEEEEEECTTS-----SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred ccCC-CCCEEEEEECCCC-----CEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccc
Confidence 467 8999999999999 899999999999999999999999999999999999999988 57899999999999
Q ss_pred EEccCCceeEEEE---cCCcceEEEEeCC-CCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-C-CeEEEE
Q 019326 157 VNLVRGRRSFYHK---IGKEASLIKFDGS-GEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-N-GVLFTG 228 (343)
Q Consensus 157 wd~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~-~~l~~~ 228 (343)
||+++++...... ....+.+++|+|+ +++++++ .|+.|++||+++++.+..+. |...|.+++|++ + .+|++|
T Consensus 197 wd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasg 276 (344)
T 4gqb_B 197 WDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASL 276 (344)
T ss_dssp EETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred ccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEE
Confidence 9999998766543 2356889999995 4567777 89999999999999998887 888999999985 3 579999
Q ss_pred eCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 229 GEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 229 ~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+.|++|++||+++++.+ .+. +|...|++++|+|++.. +|+++|.||+|++|++.+..
T Consensus 277 s~D~~i~vwd~~~~~~~-~~~-~H~~~V~~v~~sp~~~~--------llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 277 SEDCSLAVLDSSLSELF-RSQ-AHRDFVRDATWSPLNHS--------LLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ETTSCEEEECTTCCEEE-EEC-CCSSCEEEEEECSSSTT--------EEEEEETTSCEEEEECCC--
T ss_pred eCCCeEEEEECCCCcEE-EEc-CCCCCEEEEEEeCCCCe--------EEEEEcCCCeEEEEECCCCC
Confidence 99999999999988755 566 89999999999998752 68899999999999998753
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.7e-43 Score=294.84 Aligned_cols=270 Identities=16% Similarity=0.205 Sum_probs=235.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.|+.|++|++.. .......++..+.+|...|.+++|+ +.+|++|+.|++|++||+.+++.+..+.
T Consensus 32 ~l~s~s~D~~v~~W~~~~-------~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~ 104 (319)
T 3frx_A 32 LLLSASRDKTLISWKLTG-------DDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV 104 (319)
T ss_dssp EEEEEETTSEEEEEEEEE-------ETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEecCCccEEEecCCC-------CCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc
Confidence 489999999999999976 2333345678889999999999998 8899999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecC------CCEEEEEeCCCe
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHS------GKLALTVGRDDC 153 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~------~~~l~~~~~d~~ 153 (343)
+| ...|.+++|+|++ .+|++|+.|++|++||++. +++..+.+|...|.+++|.|. +..+++++.|+.
T Consensus 105 ~h-~~~v~~~~~~~~~-----~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~ 177 (319)
T 3frx_A 105 GH-KSDVMSVDIDKKA-----SMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM 177 (319)
T ss_dssp CC-SSCEEEEEECTTS-----CEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSC
T ss_pred cC-CCcEEEEEEcCCC-----CEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCE
Confidence 99 9999999999998 8999999999999999975 678888899999999999985 448999999999
Q ss_pred EEEEEccCCceeEEE-EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCC
Q 019326 154 LAMVNLVRGRRSFYH-KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGED 231 (343)
Q Consensus 154 i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d 231 (343)
|++||+++.+..... .+...+.+++|+|++++++++ .|+.|++||+.+++.+..+.+..++.+++|++++.+++++.+
T Consensus 178 i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 178 VKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp EEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEET
T ss_pred EEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC
Confidence 999999988765544 456789999999999999999 899999999999999999998899999999965544444445
Q ss_pred CcEEEEECCCCceeEEec-------ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 232 RSITAWDTNSGKVAYCIE-------DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 232 g~i~i~d~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
+.+++|++..+..+..+. ..|...+.+++|+|+++ +|++|+.||.|++||+.+.
T Consensus 258 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~---------~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 258 TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ---------TLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS---------EEEEEETTSCEEEEEEEEC
T ss_pred CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC---------EEEEeecCceEEEEEEeec
Confidence 669999999877766654 13567899999999988 9999999999999999763
No 13
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-43 Score=293.28 Aligned_cols=265 Identities=13% Similarity=0.147 Sum_probs=232.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.||.|++||+.+ ...+..+.+|..+|.+++|+ +++|++|+.|+.|++||+.+++.+..+.
T Consensus 27 ~l~s~~~dg~v~lWd~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~ 94 (304)
T 2ynn_A 27 WVLTTLYSGRVELWNYET------------QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (304)
T ss_dssp EEEEEETTSEEEEEETTT------------TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEcCCCcEEEEECCC------------CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 489999999999999987 34567778999999999998 8899999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc-ceeeeeeeccccEEEEEEec-CCCEEEEEeCCCeEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF-VLLTSVKVHKKGVNDLAVHH-SGKLALTVGRDDCLAMV 157 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~d~~i~~w 157 (343)
+| ...|.+++|+|++ ++|++|+.|++|++||++++ .....+.+|...|.+++|+| ++.+|++++.|++|++|
T Consensus 95 ~h-~~~v~~~~~~~~~-----~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iw 168 (304)
T 2ynn_A 95 AH-PDYIRSIAVHPTK-----PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (304)
T ss_dssp CC-SSCEEEEEECSSS-----SEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEE
T ss_pred CC-CCcEEEEEEcCCC-----CEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 99 9999999999998 79999999999999999876 45677889999999999999 57899999999999999
Q ss_pred EccCCceeEEEEc--CCcceEEEEeC--CCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeC
Q 019326 158 NLVRGRRSFYHKI--GKEASLIKFDG--SGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGE 230 (343)
Q Consensus 158 d~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~ 230 (343)
|++++........ ...+..+.+.| ++.+++++ .|+.|++||+++++++..+. |...|.+++|++ +.+|++|+.
T Consensus 169 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~ 248 (304)
T 2ynn_A 169 SLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE 248 (304)
T ss_dssp ETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET
T ss_pred ECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcC
Confidence 9988776554443 35678888876 67789988 89999999999999998887 888999999995 579999999
Q ss_pred CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 231 DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 231 dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
||.|++||..+++.+..+. .|...+.+++++|++... ++++|+.| .+.+|++.+
T Consensus 249 Dg~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 249 DGTLKIWNSSTYKVEKTLN-VGLERSWCIATHPTGRKN-------YIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp TSCEEEEETTTCCEEEEEC-CSSSSEEEEEECTTCGGG-------CEEEEETT-EEEEEECC-
T ss_pred CCeEEEEECCCCceeeecc-CCCccEEEEEECCCCCce-------EEEEecCC-ceEEEEecc
Confidence 9999999999999999999 899999999999876421 47777655 578888765
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.8e-43 Score=296.79 Aligned_cols=286 Identities=13% Similarity=0.109 Sum_probs=248.2
Q ss_pred eeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC
Q 019326 31 TLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA 108 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~ 108 (343)
.......+.+|.++|++++|+ +.+|++|+.||+|++||..+++....+..| ...|.+++|+|++ .+|++|+.
T Consensus 53 ~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~-~~~v~~~~~sp~g-----~~lasg~~ 126 (354)
T 2pbi_B 53 VMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMP-CTWVMACAYAPSG-----CAIACGGL 126 (354)
T ss_dssp CCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS-SSCCCEEEECTTS-----SEEEEEST
T ss_pred ccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecC-CCCEEEEEECCCC-----CEEEEeeC
Confidence 345677889999999999999 889999999999999999999998888888 8899999999999 89999999
Q ss_pred CCeEEEEECCCc------ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeC
Q 019326 109 DGFVSIFDADPF------VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDG 181 (343)
Q Consensus 109 dg~i~iwd~~~~------~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~ 181 (343)
|+.+++|++... .....+..|...|.+++|+|++..|++++.|++|++||+++++.+..+. +...+.+++++|
T Consensus 127 d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 206 (354)
T 2pbi_B 127 DNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP 206 (354)
T ss_dssp TSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECC
T ss_pred CCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEe
Confidence 999999998543 3456778899999999999999999999999999999999998876655 457788999987
Q ss_pred --CCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecc-ccccc
Q 019326 182 --SGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIED-AHSAR 255 (343)
Q Consensus 182 --~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~h~~~ 255 (343)
+++.++++ .|+.+++||+++++.+..+. |...|.+++|++ +++|++|+.|++|++||+++++.+..+.. .+...
T Consensus 207 ~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~ 286 (354)
T 2pbi_B 207 SETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFG 286 (354)
T ss_dssp CSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccc
Confidence 46789988 89999999999999988887 788999999984 67999999999999999999887776651 23457
Q ss_pred EEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCc
Q 019326 256 VKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 256 v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~ 335 (343)
+.+++|+|++. +|++++.|+.|++||+.++.... ....+...|.+++|+|++.+++.+..|+.++.+
T Consensus 287 ~~~~~~s~~g~---------~l~~g~~d~~i~vwd~~~~~~~~----~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 287 ASSVDFSLSGR---------LLFAGYNDYTINVWDVLKGSRVS----ILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp EEEEEECTTSS---------EEEEEETTSCEEEEETTTCSEEE----EECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred eeEEEEeCCCC---------EEEEEECCCcEEEEECCCCceEE----EEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 89999999887 99999999999999998764221 112456689999999999999999999876543
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.5e-43 Score=296.32 Aligned_cols=261 Identities=18% Similarity=0.252 Sum_probs=233.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC------e
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS------S 73 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~------~ 73 (343)
.|++|+.||.|++||..+ ......+..|...|.+++|+ +..|++|+.|+.+++|++... .
T Consensus 78 ~l~s~s~Dg~v~vWd~~~------------~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~ 145 (354)
T 2pbi_B 78 RIVSSSQDGKVIVWDSFT------------TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAA 145 (354)
T ss_dssp EEEEEETTSEEEEEETTT------------CCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGG
T ss_pred EEEEEeCCCeEEEEECCC------------CCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccc
Confidence 589999999999999876 23445666789999999999 899999999999999998643 3
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEec--CCCEEEEEeCC
Q 019326 74 SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH--SGKLALTVGRD 151 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~~~~~d 151 (343)
....+..| ...|.+++|+|++ ..|++++.|++|++||+++++++..+.+|...|.+++|+| ++++|++++.|
T Consensus 146 ~~~~~~~h-~~~v~~~~~~~~~-----~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 146 KKKSVAMH-TNYLSACSFTNSD-----MQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp GCEEEEEC-SSCEEEEEECSSS-----SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT
T ss_pred cceeeecc-CCcEEEEEEeCCC-----CEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC
Confidence 45566778 8999999999998 7999999999999999999999999999999999999987 46899999999
Q ss_pred CeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecC---CcceEEeeec-CCCeE
Q 019326 152 DCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG---KKRILCAAPG-ENGVL 225 (343)
Q Consensus 152 ~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~---~~~i~~~~~~-~~~~l 225 (343)
|.|++||+++++.+.... +...+.+++|+|++..++++ .|+.+++||++..+.+..+.. ...+.+++|+ ++.+|
T Consensus 220 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l 299 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLL 299 (354)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred CeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEE
Confidence 999999999998776654 45789999999999999999 899999999999888777663 3468899998 56799
Q ss_pred EEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 226 FTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 226 ~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
++|+.|+.|++||+.+++.+..+. +|...|++++|+|++. +|++|+.||+|++|+
T Consensus 300 ~~g~~d~~i~vwd~~~~~~~~~l~-~h~~~v~~l~~spdg~---------~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 300 FAGYNDYTINVWDVLKGSRVSILF-GHENRVSTLRVSPDGT---------AFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEETTSCEEEEETTTCSEEEEEC-CCSSCEEEEEECTTSS---------CEEEEETTSEEEEEC
T ss_pred EEEECCCcEEEEECCCCceEEEEE-CCCCcEEEEEECCCCC---------EEEEEcCCCCEEecC
Confidence 999999999999999999999998 9999999999999987 999999999999996
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5e-43 Score=291.35 Aligned_cols=263 Identities=20% Similarity=0.262 Sum_probs=234.2
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.||.|++|+... ......+.+|...|.+++|+ +++|++|+.|+.|++||+.+++.+..+.
T Consensus 37 ~l~s~~~dg~i~iw~~~~------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 104 (312)
T 4ery_A 37 WLASSSADKLIKIWGAYD------------GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK 104 (312)
T ss_dssp EEEEEETTSCEEEEETTT------------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeeCCCeEEEEeCCC------------cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEc
Confidence 489999999999999876 23455677999999999999 8899999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
.| ...|.+++|+|++ ++|++|+.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 105 ~~-~~~v~~~~~~~~~-----~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 105 GH-SNYVFCCNFNPQS-----NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 178 (312)
T ss_dssp CC-SSCEEEEEECSSS-----SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CC-CCCEEEEEEcCCC-----CEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 99 8999999999998 89999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeEEEEc--CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEE--eee--cCCCeEEEEeCC
Q 019326 160 VRGRRSFYHKI--GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILC--AAP--GENGVLFTGGED 231 (343)
Q Consensus 160 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~--~~~--~~~~~l~~~~~d 231 (343)
++++.+..... ...+..++|+|++++++++ .++.|++||+++++.+..+. |.....+ ..+ .++.++++|+.|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 258 (312)
T 4ery_A 179 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 258 (312)
T ss_dssp TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT
T ss_pred CCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC
Confidence 99887665533 3568889999999999999 89999999999999888886 3332221 222 356799999999
Q ss_pred CcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc--CCCcEEEEecc
Q 019326 232 RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS--SDGVICVWDVR 292 (343)
Q Consensus 232 g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~--~dg~i~vwd~~ 292 (343)
|.|++||+.+++.+..+. +|...|.+++|+|++. ++++++ .|+.|++|+.+
T Consensus 259 g~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~---------~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 259 NLVYIWNLQTKEIVQKLQ-GHTDVVISTACHPTEN---------IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SCEEEEETTTCCEEEEEC-CCSSCEEEEEECSSSS---------EEEEEECTTTCCEEEEECC
T ss_pred CEEEEEECCCchhhhhhh-ccCCcEEEEeecCcCC---------ceEEEEccCCccEEEecCC
Confidence 999999999999999999 9999999999999987 899886 69999999975
No 17
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1e-44 Score=309.58 Aligned_cols=292 Identities=16% Similarity=0.137 Sum_probs=249.1
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
......+.+|.++|++++|+ +++|++|+.||+|++||+.+++....+..| ...|.+++|+|++ ++|++|+.|
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h-~~~v~~~~~s~~g-----~~las~~~d 129 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLH-CPWVMECAFAPNG-----QSVACGGLD 129 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECC-CTTCCCCEECTTS-----SEEEECCSS
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecC-CCCEEEEEECCCC-----CEEEEeeCC
Confidence 56678899999999999999 889999999999999999999999999999 8999999999999 899999999
Q ss_pred CeEEEEECCCc-------ceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEEE------cCCcce
Q 019326 110 GFVSIFDADPF-------VLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHK------IGKEAS 175 (343)
Q Consensus 110 g~i~iwd~~~~-------~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~------~~~~~~ 175 (343)
+.+++||+.+. .....+.+|.+.|.++.|.|++ ..|++++.|++|++||+++++.+.... +...+.
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence 99999998642 2456678899999999999974 679999999999999999998776552 346688
Q ss_pred EEEEeC-CCCEEEEE-eCCcEEEEEcc-cceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecc
Q 019326 176 LIKFDG-SGEKFFMV-TEEKVGIHQAE-DAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIED 250 (343)
Q Consensus 176 ~~~~~~-~~~~~~~~-~~~~i~~~d~~-~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 250 (343)
++++++ ++..++++ .|+.|++||++ ..+.+..+. |...|.+++|++ +.+|++|+.||+|++||+++++.+..+.
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~- 288 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN- 288 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC-
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec-
Confidence 899977 78888888 89999999998 446666665 889999999995 5799999999999999999999888876
Q ss_pred ccc-------ccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCcee
Q 019326 251 AHS-------ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFK 323 (343)
Q Consensus 251 ~h~-------~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~ 323 (343)
.+. ..|++++|+|++. +|++|+.||.|++||+..+............+...|.+++|+|++.++
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g~---------~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 359 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISGR---------LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSAL 359 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSSS---------EEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEE
T ss_pred ccccccccccCceEEEEECCCCC---------EEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEE
Confidence 332 3489999999988 999999999999999987643322211123456789999999999999
Q ss_pred ccccCCCCCCCccccC
Q 019326 324 RPQIGDSAPKGEEKAS 339 (343)
Q Consensus 324 ~~~~~~~~~~~~~~~~ 339 (343)
+.+..|+.++.++...
T Consensus 360 ~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 360 CTGSWDKNLKIWAFSG 375 (380)
T ss_dssp EEECTTSCEEEEECCS
T ss_pred EEeeCCCCEEEEecCC
Confidence 9999999988776543
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.7e-43 Score=295.88 Aligned_cols=291 Identities=14% Similarity=0.156 Sum_probs=236.9
Q ss_pred eeeEEeEEecCCCCCeEEEEe-----c---CceEEEeeCCCeEEEEEcCCC-------eeeeEeccCCCCCeEEEEEeCC
Q 019326 30 LTLTQLFSYPAHLSPITTVAV-----S---GTAAASGGTDDTIHLYDLSTS-------SSLGAIHHHESSSVTSLAFYTP 94 (343)
Q Consensus 30 ~~~~~~~~~~~h~~~v~~l~~-----~---~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~l~~~~~ 94 (343)
........+++|.++|++++| + +.+|++|+.|++|++||+.+. .....+.+| ...|.+++|+|+
T Consensus 9 ~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h-~~~V~~~~~~~~ 87 (343)
T 2xzm_R 9 IQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGH-NHFVSDLALSQE 87 (343)
T ss_dssp EEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCC-SSCEEEEEECSS
T ss_pred eEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccC-CCceEEEEECCC
Confidence 345667788999999999999 3 779999999999999999753 456678888 899999999999
Q ss_pred CCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE---EcC
Q 019326 95 QNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH---KIG 171 (343)
Q Consensus 95 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~---~~~ 171 (343)
+ .++++|+.|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+......... .+.
T Consensus 88 ~-----~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 162 (343)
T 2xzm_R 88 N-----CFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHS 162 (343)
T ss_dssp T-----TEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCS
T ss_pred C-----CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCC
Confidence 8 79999999999999999999999999999999999999999999999999999999999744332222 244
Q ss_pred CcceEEEEeCCC----------CEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEE
Q 019326 172 KEASLIKFDGSG----------EKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWD 238 (343)
Q Consensus 172 ~~~~~~~~~~~~----------~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d 238 (343)
..+.+++|+|++ .+++++ .|+.|++||. ..+....+. |...|.+++|++ +++|++|+.||.|++||
T Consensus 163 ~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd 241 (343)
T 2xzm_R 163 DWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWD 241 (343)
T ss_dssp SCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred ceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEE
Confidence 678999999987 678888 8999999994 445555554 889999999994 67999999999999999
Q ss_pred CC-CCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccc---------ccccc
Q 019326 239 TN-SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLA---------EAKTN 308 (343)
Q Consensus 239 ~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---------~~~~~ 308 (343)
+. .......+. +...|.+++|+|++. +++ ++.|+.|++||+.+........+. ...+.
T Consensus 242 ~~~~~~~~~~~~--~~~~v~~v~~sp~~~---------~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (343)
T 2xzm_R 242 ILNLTYPQREFD--AGSTINQIAFNPKLQ---------WVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKN 309 (343)
T ss_dssp SSCCSSCSEEEE--CSSCEEEEEECSSSC---------EEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSC
T ss_pred CCCCcccceeec--CCCcEEEEEECCCCC---------EEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCC
Confidence 94 444555554 566799999999875 655 556889999999876422200000 01244
Q ss_pred cceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 309 SRLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 309 ~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
..|.+++|+|++.+++.+..|+.++.++.+.
T Consensus 310 ~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 310 PQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp CCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred CceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 5799999999999999999999888776544
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-43 Score=295.75 Aligned_cols=291 Identities=17% Similarity=0.168 Sum_probs=228.7
Q ss_pred eEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCC--eeeeEe-cc-CCCCCeEEEEEeCCCCCCCCceEEEee
Q 019326 32 LTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTS--SSLGAI-HH-HESSSVTSLAFYTPQNLSVPRNLFSTS 107 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~-~~-~~~~~v~~l~~~~~~~~~~~~~l~s~~ 107 (343)
.+.+..+.+|.++|.+++|++++|++|+.|+.|++||+.++ +....+ .. | ...|.+++|+|++ ++|++|+
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h-~~~v~~v~~sp~~-----~~las~s 77 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAH-KKAIRSVAWRPHT-----SLLAAGS 77 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCC-CSCEEEEEECTTS-----SEEEEEE
T ss_pred cccceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCc-cCCEEEEEECCCC-----CEEEEEe
Confidence 45667788999999999999779999999999999999875 445555 34 6 8999999999998 8999999
Q ss_pred CCCeEEEEECCC-------cceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCC----ceeEE-EEcCCcce
Q 019326 108 ADGFVSIFDADP-------FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG----RRSFY-HKIGKEAS 175 (343)
Q Consensus 108 ~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~----~~~~~-~~~~~~~~ 175 (343)
.|++|++||+.. .+++..+.+|...|.+++|+|++++|++++.|++|++||++.. +.+.. ..+...+.
T Consensus 78 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~ 157 (330)
T 2hes_X 78 FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVK 157 (330)
T ss_dssp TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEE
T ss_pred CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceE
Confidence 999999999842 3567778899999999999999999999999999999999543 22222 23557899
Q ss_pred EEEEeCCCCEEEEE-eCCcEEEEEcccc--eeEEEec-CCcceEEeeecCC---CeEEEEeCCCcEEEEECCCC------
Q 019326 176 LIKFDGSGEKFFMV-TEEKVGIHQAEDA--KLLCELD-GKKRILCAAPGEN---GVLFTGGEDRSITAWDTNSG------ 242 (343)
Q Consensus 176 ~~~~~~~~~~~~~~-~~~~i~~~d~~~~--~~~~~~~-~~~~i~~~~~~~~---~~l~~~~~dg~i~i~d~~~~------ 242 (343)
+++|+|++.+++++ .|+.|++||..++ +++..+. |...|.++.|++. .+|++|+.|++|++||+..+
T Consensus 158 ~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 158 HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 99999999999999 8999999999876 5666666 8889999999853 57999999999999998754
Q ss_pred --ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCC--
Q 019326 243 --KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSS-- 318 (343)
Q Consensus 243 --~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~-- 318 (343)
.....+...|...|.+++|++.+ +|++++.||.|++||..++...........+....|.+++|+|
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s~~~----------~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~ 307 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWGFNG----------LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELN 307 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEECTTS----------CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC---
T ss_pred eeEEeeecccccccceEEEEEcCCC----------EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCC
Confidence 34455553499999999998554 7999999999999999865211110111112222799999999
Q ss_pred CCceeccccCCCCCCCcccc
Q 019326 319 TKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~ 338 (343)
++.+++.+..|+.++.++..
T Consensus 308 ~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 308 GKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp --CCEEEEETTSEEEEEEC-
T ss_pred CceEEEEecCCCcEEEEEec
Confidence 78999999999988776643
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-43 Score=292.12 Aligned_cols=267 Identities=19% Similarity=0.224 Sum_probs=214.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEe-cC-CCCCeEEEEec--CceEEEeeCCCeEEEEEcCC------
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSY-PA-HLSPITTVAVS--GTAAASGGTDDTIHLYDLST------ 71 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~------ 71 (343)
.|++|+.|+.|++|++... . ......+ .+ |..+|.+++|+ +++|++|+.|+.|++||+..
T Consensus 26 ~las~~~D~~i~lw~~~~~-------~---~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~ 95 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYD-------D---FTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTF 95 (330)
T ss_dssp EEEEEESSSCEEEEECSSS-------C---CEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------C
T ss_pred EEEEEcCCCEEEEEEecCC-------C---eEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccc
Confidence 4899999999999999751 1 1233334 34 99999999998 88999999999999999853
Q ss_pred -CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC----cceeeeeeeccccEEEEEEecCCCEEE
Q 019326 72 -SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP----FVLLTSVKVHKKGVNDLAVHHSGKLAL 146 (343)
Q Consensus 72 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~i~~~~~~~~l~ 146 (343)
.+.+..+.+| ...|.+++|+|++ ++|++|+.|++|++||++. .+++..+.+|...|.+++|+|++.+|+
T Consensus 96 ~~~~~~~~~~h-~~~V~~v~~sp~g-----~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 169 (330)
T 2hes_X 96 EMDLLAIIEGH-ENEVKGVAWSNDG-----YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLA 169 (330)
T ss_dssp CCEEEEEEC-----CEEEEEECTTS-----CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred cceeEEEEcCC-CCcEEEEEECCCC-----CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEE
Confidence 3566778889 9999999999998 8999999999999999943 356778889999999999999999999
Q ss_pred EEeCCCeEEEEEccCCc--eeEEE-EcCCcceEEEEeCC--CCEEEEE-eCCcEEEEEcccc--------eeEEEec--C
Q 019326 147 TVGRDDCLAMVNLVRGR--RSFYH-KIGKEASLIKFDGS--GEKFFMV-TEEKVGIHQAEDA--------KLLCELD--G 210 (343)
Q Consensus 147 ~~~~d~~i~~wd~~~~~--~~~~~-~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~d~~~~--------~~~~~~~--~ 210 (343)
+++.|++|++||..++. .+... .+...+.+++|+|+ +..++++ .|+.|++||++.+ .....+. |
T Consensus 170 s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h 249 (330)
T 2hes_X 170 SSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVH 249 (330)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCC
T ss_pred EEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccccc
Confidence 99999999999998763 33333 35578999999998 6788888 8999999999865 3344443 7
Q ss_pred CcceEEeeecCCCeEEEEeCCCcEEEEECCCCc--eeEEecccccc-cEEEEEEEe--cCCCCCCCCCCeEEEEEcCCCc
Q 019326 211 KKRILCAAPGENGVLFTGGEDRSITAWDTNSGK--VAYCIEDAHSA-RVKGIVVLT--KNDGGSTAENPYLVASASSDGV 285 (343)
Q Consensus 211 ~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~h~~-~v~~~~~~~--~~~~~~~~~~~~~l~s~~~dg~ 285 (343)
...|.+++|+++.+|++++.||.|++||..+++ .......+|.. .|.+++|+| ++. +|++|+.||+
T Consensus 250 ~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~---------~las~s~Dg~ 320 (330)
T 2hes_X 250 KRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKT---------ILATGGDDGI 320 (330)
T ss_dssp SSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----C---------CEEEEETTSE
T ss_pred ccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCce---------EEEEecCCCc
Confidence 789999999988899999999999999998774 34343237887 899999998 444 8999999999
Q ss_pred EEEEeccC
Q 019326 286 ICVWDVRM 293 (343)
Q Consensus 286 i~vwd~~~ 293 (343)
|++||++.
T Consensus 321 v~~W~~~~ 328 (330)
T 2hes_X 321 VNFWSLEK 328 (330)
T ss_dssp EEEEEC--
T ss_pred EEEEEecc
Confidence 99999875
No 21
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8e-44 Score=298.99 Aligned_cols=277 Identities=15% Similarity=0.114 Sum_probs=225.5
Q ss_pred CCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC-----------eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEe
Q 019326 40 AHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS-----------SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFST 106 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~-----------~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~ 106 (343)
.|...|.+++|+ |.+|++++ |+++++||.... ........+ ...|.+++|+|++ .|++|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~d~------~l~~~ 99 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQT-EAGVADLTWVGER------GILVA 99 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEE-SSCEEEEEEETTT------EEEEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeecc-CCCEEEEEEeCCC------eEEEE
Confidence 577889999999 77887776 778888873211 111112234 5789999999987 78999
Q ss_pred eCCCeEEEEECCCcceeeee----eeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeC
Q 019326 107 SADGFVSIFDADPFVLLTSV----KVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDG 181 (343)
Q Consensus 107 ~~dg~i~iwd~~~~~~~~~~----~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~ 181 (343)
+.||+|++||+.+++.+..+ .+|.+.|.+++|+|++++|++++.|++|++||+++++.+..+. +...|.+++|+|
T Consensus 100 s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~ 179 (344)
T 4gqb_B 100 SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASP 179 (344)
T ss_dssp ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS
T ss_pred ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecC
Confidence 99999999999988765443 4799999999999999999999999999999999998877665 568899999999
Q ss_pred CCC-EEEEE-eCCcEEEEEcccceeEEEec---CCcceEEeeecC--CCeEEEEeCCCcEEEEECCCCceeEEecccccc
Q 019326 182 SGE-KFFMV-TEEKVGIHQAEDAKLLCELD---GKKRILCAAPGE--NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSA 254 (343)
Q Consensus 182 ~~~-~~~~~-~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~ 254 (343)
++. .++++ .|+.|++||+++++....+. +...+.+++|++ ++++++|+.||.|++||+++++++..+. +|..
T Consensus 180 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~-~h~~ 258 (344)
T 4gqb_B 180 HKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA-VHSQ 258 (344)
T ss_dssp SCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE-CCSS
T ss_pred CCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc-CCCC
Confidence 985 56777 89999999999999888775 455688999984 4688999999999999999999999999 9999
Q ss_pred cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCc-eeccccCCCCCC
Q 019326 255 RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKS-FKRPQIGDSAPK 333 (343)
Q Consensus 255 ~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~~~~~~~~~~~~ 333 (343)
.|++++|+|++.. +|++|+.|++|+|||+++++. +....+...|++++|+|++. +++.+..|+.++
T Consensus 259 ~v~~v~fsp~g~~--------~lasgs~D~~i~vwd~~~~~~-----~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 259 CVTGLVFSPHSVP--------FLASLSEDCSLAVLDSSLSEL-----FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp CEEEEEECSSSSC--------CEEEEETTSCEEEECTTCCEE-----EEECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred CEEEEEEccCCCe--------EEEEEeCCCeEEEEECCCCcE-----EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 9999999998641 799999999999999988642 22234567899999999986 566788899887
Q ss_pred Ccccc
Q 019326 334 GEEKA 338 (343)
Q Consensus 334 ~~~~~ 338 (343)
.++.+
T Consensus 326 ~w~v~ 330 (344)
T 4gqb_B 326 HHVVP 330 (344)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66543
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.9e-44 Score=303.88 Aligned_cols=280 Identities=15% Similarity=0.137 Sum_probs=228.9
Q ss_pred cCCCCCeEEEEec--CceEEEeeC------CCeEEEEEcCCCeeee----EeccCCCCCeEEEEEeCCCCCCCCceEEEe
Q 019326 39 PAHLSPITTVAVS--GTAAASGGT------DDTIHLYDLSTSSSLG----AIHHHESSSVTSLAFYTPQNLSVPRNLFST 106 (343)
Q Consensus 39 ~~h~~~v~~l~~~--~~~l~s~~~------dg~i~iwd~~~~~~~~----~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~ 106 (343)
.+|...|++++|+ |.+|++|+. |+.|++|+..++.... ....| ...|.+++|+|++ .++++
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~s~d~------~~l~~ 111 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQT-EAGVTDVAWVSEK------GILVA 111 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEEC-SSCEEEEEEETTT------EEEEE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCC-CCCEEEEEEcCCC------CEEEE
Confidence 4799999999999 899999997 7889999988765433 33456 7889999999987 67788
Q ss_pred eCCCeEEEEECCCcceee----eeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeC
Q 019326 107 SADGFVSIFDADPFVLLT----SVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDG 181 (343)
Q Consensus 107 ~~dg~i~iwd~~~~~~~~----~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~ 181 (343)
+.||+|++||+.+++... ...+|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +...+.+++|+|
T Consensus 112 s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~ 191 (357)
T 4g56_B 112 SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACP 191 (357)
T ss_dssp ETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence 899999999998776543 234789999999999999999999999999999999998776655 457899999999
Q ss_pred CCC-EEEEE-eCCcEEEEEcccceeEEEec---CCcceEEeeecC--CCeEEEEeCCCcEEEEECCCCceeEEecccccc
Q 019326 182 SGE-KFFMV-TEEKVGIHQAEDAKLLCELD---GKKRILCAAPGE--NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSA 254 (343)
Q Consensus 182 ~~~-~~~~~-~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~ 254 (343)
++. .++++ .|+.|++||+++++....+. +...+.+++|++ +.+|++|+.|+.|++||+++++.+..+. +|..
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~-~~~~ 270 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA-VHSQ 270 (357)
T ss_dssp TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC-CCSS
T ss_pred CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe-ccce
Confidence 875 56666 89999999999988776654 567799999984 4588999999999999999999999999 9999
Q ss_pred cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCC-CCceeccccCCCCCC
Q 019326 255 RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSS-TKSFKRPQIGDSAPK 333 (343)
Q Consensus 255 ~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~~~~~~~~~~~~ 333 (343)
.|++++|+|++. ++|++++.||+|+|||+++++. +....+...|++++|+| ++.+++.+..|+.++
T Consensus 271 ~v~~l~~sp~~~--------~~lasgs~D~~i~iwd~~~~~~-----~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 271 NITGLAYSYHSS--------PFLASISEDCTVAVLDADFSEV-----FRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp CEEEEEECSSSS--------CCEEEEETTSCEEEECTTSCEE-----EEECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred eEEEEEEcCCCC--------CEEEEEeCCCEEEEEECCCCcE-----eEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 999999998864 1799999999999999998752 23345677899999998 789999999999888
Q ss_pred CccccC
Q 019326 334 GEEKAS 339 (343)
Q Consensus 334 ~~~~~~ 339 (343)
.++.+.
T Consensus 338 iW~~~~ 343 (357)
T 4g56_B 338 HHHLPS 343 (357)
T ss_dssp EEECC-
T ss_pred EEECCC
Confidence 776543
No 23
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1e-42 Score=289.55 Aligned_cols=286 Identities=17% Similarity=0.201 Sum_probs=246.8
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
......+.+|..+|++++|+ +++|++|+.||.|++|++.+++....+..| ...|.+++|+|++ ++|++++.|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h-~~~v~~~~~~~~~-----~~l~s~~~d 86 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH-KLGISDVAWSSDS-----NLLVSASDD 86 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTS-----SEEEEEETT
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccC-CCceEEEEEcCCC-----CEEEEECCC
Confidence 45667888999999999999 889999999999999999999999999999 8999999999998 899999999
Q ss_pred CeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEE
Q 019326 110 GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFM 188 (343)
Q Consensus 110 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 188 (343)
+.|++||+++++++..+.+|...|.+++|+|++++|++++.|+.|++||+++++...... +...+.+++|+|+++++++
T Consensus 87 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 166 (312)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999988776654 4578999999999999999
Q ss_pred E-eCCcEEEEEcccceeEEEec--CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEE--EEE
Q 019326 189 V-TEEKVGIHQAEDAKLLCELD--GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGI--VVL 262 (343)
Q Consensus 189 ~-~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~--~~~ 262 (343)
+ .|+.|++||+++++.+..+. +..++.+++|++ +++|++++.||.|++||+++++.+..+. +|...+..+ .++
T Consensus 167 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 167 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFS 245 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEC-SSCCSSSCCCEEEE
T ss_pred EeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEE-ecCCceEEEEEEEE
Confidence 9 89999999999998887764 556799999984 6799999999999999999999999888 776654333 333
Q ss_pred -ecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceecccc--CCCCCCCccc
Q 019326 263 -TKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQI--GDSAPKGEEK 337 (343)
Q Consensus 263 -~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~--~~~~~~~~~~ 337 (343)
+++. +|++|+.||.|++||++++...... ..+...|.+++++|++.+++.+. .|+.++.++.
T Consensus 246 ~~~~~---------~l~sg~~dg~i~vwd~~~~~~~~~~----~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 246 VTGGK---------WIVSGSEDNLVYIWNLQTKEIVQKL----QGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp CSSSC---------EEEECCTTSCEEEEETTTCCEEEEE----CCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred eCCCc---------EEEEECCCCEEEEEECCCchhhhhh----hccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 3333 9999999999999999876422111 13456799999999999998875 5777665543
No 24
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1e-42 Score=293.20 Aligned_cols=272 Identities=19% Similarity=0.161 Sum_probs=225.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.|+.|++||+...+. ......+...+.+|..+|++++|+ +.++++|+.|++|++||+.+++.+..+.
T Consensus 41 ~l~sgs~D~~v~iWd~~~~~~-----~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~ 115 (343)
T 2xzm_R 41 VLISGSRDKTVMIWKLYEEEQ-----NGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFV 115 (343)
T ss_dssp EEEEEETTSCEEEEEECSSCC-----SSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEE
T ss_pred EEEEEcCCCEEEEEECCcCCc-----ccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 489999999999999975211 112235567788999999999998 7899999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeee---eccccEEEEEEecCC----------CEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK---VHKKGVNDLAVHHSG----------KLAL 146 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~i~~~~~~----------~~l~ 146 (343)
+| ...|.+++|+|++ ++|++++.|++|++||+... ...... .|...|.+++|+|++ .+|+
T Consensus 116 ~h-~~~v~~v~~sp~~-----~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~ 188 (343)
T 2xzm_R 116 GH-QSEVYSVAFSPDN-----RQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFA 188 (343)
T ss_dssp CC-CSCEEEEEECSST-----TEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEE
T ss_pred CC-CCcEEEEEECCCC-----CEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEE
Confidence 99 9999999999999 89999999999999999743 333332 688899999999986 7899
Q ss_pred EEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcc-cceeEEEecCCcceEEeeecCCCe
Q 019326 147 TVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAE-DAKLLCELDGKKRILCAAPGENGV 224 (343)
Q Consensus 147 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~-~~~~~~~~~~~~~i~~~~~~~~~~ 224 (343)
+++.|+.|++||...........+...+.+++|+|++++|+++ .|+.|++||+. .......+.+...|.+++|+++..
T Consensus 189 s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~ 268 (343)
T 2xzm_R 189 SVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQ 268 (343)
T ss_dssp EEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSC
T ss_pred EEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCC
Confidence 9999999999995433233334566789999999999999999 89999999994 445556666777899999997666
Q ss_pred EEEEeCCCcEEEEECCCCceeE--Eec----------ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 225 LFTGGEDRSITAWDTNSGKVAY--CIE----------DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 225 l~~~~~dg~i~i~d~~~~~~~~--~~~----------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+++++.|+.|++||+.+++... .+. .+|...|.+++|+|++. +|++|+.||.|++|+++
T Consensus 269 ~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~---------~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 269 WVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK---------KLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp EEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC---------CEEEEETTSEEEEEEEE
T ss_pred EEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC---------eEEEecCCceEEEEEEE
Confidence 6667778899999998776433 332 15778899999999987 99999999999999998
Q ss_pred Cc
Q 019326 293 MA 294 (343)
Q Consensus 293 ~~ 294 (343)
++
T Consensus 340 ~g 341 (343)
T 2xzm_R 340 TS 341 (343)
T ss_dssp EE
T ss_pred cc
Confidence 75
No 25
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=290.60 Aligned_cols=273 Identities=21% Similarity=0.246 Sum_probs=223.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC--eeeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS--SSLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~--~~~~~ 77 (343)
.|++|+.|+.|++||+.. +.. ........+|...|++++|+ +++|++|+.|+.|++|++.++ +.+..
T Consensus 30 ~las~~~D~~i~iw~~~~-------~~~--~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~ 100 (345)
T 3fm0_A 30 LLASCGGDRRIRIWGTEG-------DSW--ICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT 100 (345)
T ss_dssp CEEEEETTSCEEEEEEET-------TEE--EEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEE
T ss_pred EEEEEcCCCeEEEEEcCC-------Ccc--eeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEE
Confidence 489999999999999986 211 11222336899999999998 889999999999999999876 45778
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc---ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeE
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF---VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCL 154 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i 154 (343)
+.+| ...|.+++|+|++ ++|++|+.|++|++||+++. +++..+.+|...|.+++|+|++++|++++.|+.|
T Consensus 101 ~~~h-~~~v~~v~~sp~~-----~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i 174 (345)
T 3fm0_A 101 LEGH-ENEVKSVAWAPSG-----NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTV 174 (345)
T ss_dssp ECCC-SSCEEEEEECTTS-----SEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCE
T ss_pred ccCC-CCCceEEEEeCCC-----CEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcE
Confidence 8889 9999999999998 89999999999999999765 3466778899999999999999999999999999
Q ss_pred EEEEccCCceeE---EEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc---------------eeEEEec--CCcc
Q 019326 155 AMVNLVRGRRSF---YHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA---------------KLLCELD--GKKR 213 (343)
Q Consensus 155 ~~wd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~---------------~~~~~~~--~~~~ 213 (343)
++||.++++... ...+...+.+++|+|++++|+++ .|+.|++|+.... +++..+. |...
T Consensus 175 ~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 254 (345)
T 3fm0_A 175 KLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRT 254 (345)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSC
T ss_pred EEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCc
Confidence 999998876432 22345789999999999999999 8999999997432 2233333 6788
Q ss_pred eEEeeec-CCCeEEEEeCCCcEEEEECCCCc--------eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCC
Q 019326 214 ILCAAPG-ENGVLFTGGEDRSITAWDTNSGK--------VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG 284 (343)
Q Consensus 214 i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg 284 (343)
|.+++|+ .+..|++++.|+.|++|+...+. .......+|...|++++|+|++.. +|++++.||
T Consensus 255 v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~--------~laS~s~Dg 326 (345)
T 3fm0_A 255 IYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPG--------LLASCSDDG 326 (345)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTT--------EEEEEETTS
T ss_pred EEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCce--------EEEEcCCCC
Confidence 9999998 46799999999999999987542 112222389999999999998631 899999999
Q ss_pred cEEEEeccCcccc
Q 019326 285 VICVWDVRMAIKE 297 (343)
Q Consensus 285 ~i~vwd~~~~~~~ 297 (343)
+|++|++.+.++.
T Consensus 327 ~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 327 EVAFWKYQRPEGL 339 (345)
T ss_dssp CEEEEEECC----
T ss_pred cEEEEEecCCCCc
Confidence 9999999987543
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=292.54 Aligned_cols=293 Identities=18% Similarity=0.195 Sum_probs=241.3
Q ss_pred eEEeEEecCCCC-CeEEEEec--CceEEEeeCCCeEEEEEcCCCeeee--Ee-ccCCCCCeEEEEEeCCCCCCCCceEEE
Q 019326 32 LTQLFSYPAHLS-PITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLG--AI-HHHESSSVTSLAFYTPQNLSVPRNLFS 105 (343)
Q Consensus 32 ~~~~~~~~~h~~-~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~--~~-~~~~~~~v~~l~~~~~~~~~~~~~l~s 105 (343)
+..+..+++|.. .|.+++|+ +++|++|+.|+.|++||+.+++... .+ .+| ...|.+++|+|++ ++|++
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~g-----~~l~s 78 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGH-QRTVRKVAWSPCG-----NYLAS 78 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSC-SSCEEEEEECTTS-----SEEEE
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeecccc-CCcEEEEEECCCC-----CEEEE
Confidence 567788889988 99999999 8999999999999999999876432 22 567 8999999999998 89999
Q ss_pred eeCCCeEEEEECCCc--ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeE----EEEcCCcceEEEE
Q 019326 106 TSADGFVSIFDADPF--VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF----YHKIGKEASLIKF 179 (343)
Q Consensus 106 ~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~----~~~~~~~~~~~~~ 179 (343)
|+.|++|++||+... +++..+.+|...|.+++|+|++++|++++.|++|++||++++.... ...+...+.+++|
T Consensus 79 ~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 79 ASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp EETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred EECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 999999999998765 4678889999999999999999999999999999999998765322 2234577999999
Q ss_pred eCCCCEEEEE-eCCcEEEEEccccee--EEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCC------------
Q 019326 180 DGSGEKFFMV-TEEKVGIHQAEDAKL--LCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSG------------ 242 (343)
Q Consensus 180 ~~~~~~~~~~-~~~~i~~~d~~~~~~--~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~------------ 242 (343)
+|++++++++ .|+.|++||.+.++. ...+. |...|.+++|++ +++|++|+.|++|++||....
T Consensus 159 ~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~ 238 (345)
T 3fm0_A 159 HPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSD 238 (345)
T ss_dssp CSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---
T ss_pred CCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccC
Confidence 9999999999 899999999988753 34554 888999999994 679999999999999996322
Q ss_pred ---ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcc----c-ccccccceeEE
Q 019326 243 ---KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPL----A-EAKTNSRLTCL 314 (343)
Q Consensus 243 ---~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~----~-~~~~~~~i~~~ 314 (343)
+.+..+...|...|.+++|++++. .|++++.|+.|++|+............ . ...+...|.++
T Consensus 239 ~~~~~~~~~~~~h~~~v~~v~~~~~~~---------~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v 309 (345)
T 3fm0_A 239 PSWKCICTLSGFHSRTIYDIAWCQLTG---------ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCV 309 (345)
T ss_dssp CEEEEEEEECSSCSSCEEEEEECTTTC---------CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEE
T ss_pred CccceeEEecCCCCCcEEEEEEecCCC---------EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEe
Confidence 234455534899999999999887 899999999999999986532211111 0 11345679999
Q ss_pred EcCCCC-ceeccccCCCCCCCccccC
Q 019326 315 AGSSTK-SFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 315 ~~s~~~-~~~~~~~~~~~~~~~~~~~ 339 (343)
+|+|++ .+++.+..|+.++.++...
T Consensus 310 ~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 310 AWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp EECSSSTTEEEEEETTSCEEEEEECC
T ss_pred EEeCCCceEEEEcCCCCcEEEEEecC
Confidence 999998 4899999999888776654
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.9e-42 Score=311.54 Aligned_cols=296 Identities=20% Similarity=0.249 Sum_probs=252.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++++.|+.|++|+... .....+.+|..+|.+++|+ +..|++++.|+.|++||.. ++.+..+.
T Consensus 276 ~l~~~~~d~~i~~w~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~ 341 (577)
T 2ymu_A 276 TIASASDDKTVKLWNRNG-------------QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLT 341 (577)
T ss_dssp EEEEEETTSCEEEEETTS-------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEEC
T ss_pred EEEEEeCCCEEEEEeCCC-------------cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEe
Confidence 478999999999999653 3455678999999999998 7899999999999999986 45566788
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
.| ...|.+++|+|++ ++|++++.|+.|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||.
T Consensus 342 ~~-~~~v~~~~~s~~g-----~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~ 414 (577)
T 2ymu_A 342 GH-SSSVWGVAFSPDG-----QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 414 (577)
T ss_dssp CC-SSCEEEEEECTTS-----SEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred CC-CCCEEEEEECCCC-----CEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 88 8999999999999 89999999999999996 55788899999999999999999999999999999999996
Q ss_pred cCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEE
Q 019326 160 VRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITA 236 (343)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i 236 (343)
..........+...+.+++|+|++++++++ .|+.+++||.. ++.+..+. |...+.+++|+ ++.+|++++.|+.|++
T Consensus 415 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~i 493 (577)
T 2ymu_A 415 NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL 493 (577)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEE
Confidence 443333344566889999999999999999 89999999975 45555554 88999999999 4679999999999999
Q ss_pred EECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEc
Q 019326 237 WDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAG 316 (343)
Q Consensus 237 ~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~ 316 (343)
||. +++.+..+. +|...|++++|+|++. +|++++.||.|++||... .. .. ....+...|.+++|
T Consensus 494 w~~-~~~~~~~~~-~h~~~v~~l~~s~dg~---------~l~s~~~dg~v~lwd~~~-~~---~~-~~~~h~~~v~~~~f 557 (577)
T 2ymu_A 494 WNR-NGQLLQTLT-GHSSSVRGVAFSPDGQ---------TIASASDDKTVKLWNRNG-QL---LQ-TLTGHSSSVWGVAF 557 (577)
T ss_dssp EET-TSCEEEEEE-CCSSCEEEEEECTTSS---------CEEEEETTSEEEEECTTS-CE---EE-EEECCSSCEEEEEE
T ss_pred EcC-CCCEEEEEe-CCCCCEEEEEEcCCCC---------EEEEEECcCEEEEEeCCC-CE---EE-EEcCCCCCEEEEEE
Confidence 995 588899998 9999999999999887 999999999999999643 21 11 11235678999999
Q ss_pred CCCCceeccccCCCCCCCc
Q 019326 317 SSTKSFKRPQIGDSAPKGE 335 (343)
Q Consensus 317 s~~~~~~~~~~~~~~~~~~ 335 (343)
+||+++++.+..|+.++.+
T Consensus 558 s~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 558 SPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp CTTSSCEEEEETTSCEEEE
T ss_pred cCCCCEEEEEeCCCEEEEe
Confidence 9999999999999877654
No 28
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-42 Score=296.17 Aligned_cols=282 Identities=17% Similarity=0.243 Sum_probs=242.2
Q ss_pred CCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCC-----------------CCCeEEEEEeCCCCCCCC
Q 019326 40 AHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHE-----------------SSSVTSLAFYTPQNLSVP 100 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------------~~~v~~l~~~~~~~~~~~ 100 (343)
+|...|++++|+ +++|++|+ ++.+++|++.+++.+..+..+. ...|.+++|+|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg----- 135 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG----- 135 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS-----
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCC-----
Confidence 699999999999 88899876 6889999999998888776541 1249999999999
Q ss_pred ceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEe
Q 019326 101 RNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFD 180 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+++++..........+..++++
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~ 215 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS 215 (393)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEC
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999988888888899999999
Q ss_pred C-CCCEEEEE-eCCcEEEEEcccceeEEEe--------cCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCC-------
Q 019326 181 G-SGEKFFMV-TEEKVGIHQAEDAKLLCEL--------DGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSG------- 242 (343)
Q Consensus 181 ~-~~~~~~~~-~~~~i~~~d~~~~~~~~~~--------~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~------- 242 (343)
| ++.+++++ .|+.|++||+++++.+..+ .|...|.+++|+ ++.+|++|+.||.|++||+++.
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 9 88999999 8999999999998887766 267889999998 4679999999999999999763
Q ss_pred -----ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcC
Q 019326 243 -----KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGS 317 (343)
Q Consensus 243 -----~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s 317 (343)
.....+. +|...|.++++++++. +|++++.||.|++||++++.... .. ..+...|.+++++
T Consensus 296 ~~~~~~~~~~~~-~h~~~v~~~~~~~~~~---------~l~sgs~D~~v~iwd~~~~~~~~---~l-~~h~~~v~~v~~~ 361 (393)
T 1erj_A 296 TPNSGTCEVTYI-GHKDFVLSVATTQNDE---------YILSGSKDRGVLFWDKKSGNPLL---ML-QGHRNSVISVAVA 361 (393)
T ss_dssp -----CEEEEEE-CCSSCEEEEEECGGGC---------EEEEEETTSEEEEEETTTCCEEE---EE-ECCSSCEEEEEEC
T ss_pred CCCCCcceEEEe-cccCcEEEEEECCCCC---------EEEEEeCCCeEEEEECCCCeEEE---EE-CCCCCCEEEEEec
Confidence 3445666 8999999999999987 99999999999999999864221 11 1345679999987
Q ss_pred C------CCceeccccCCCCCCCccccCcc
Q 019326 318 S------TKSFKRPQIGDSAPKGEEKASME 341 (343)
Q Consensus 318 ~------~~~~~~~~~~~~~~~~~~~~~~~ 341 (343)
+ ++.+++.+..|+.++.++....+
T Consensus 362 ~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 362 NGSSLGPEYNVFATGSGDCKARIWKYKKIA 391 (393)
T ss_dssp SSCTTCTTCEEEEEEETTSEEEEEEEEEC-
T ss_pred CCcCcCCCCCEEEEECCCCcEEECcccccC
Confidence 6 68899999999998887765543
No 29
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.7e-43 Score=299.14 Aligned_cols=268 Identities=16% Similarity=0.147 Sum_probs=218.1
Q ss_pred eeEEecc------CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCee
Q 019326 2 SLIAGSY------EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSS 74 (343)
Q Consensus 2 ~l~~g~~------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~ 74 (343)
.|++|+. |+.|++|+..... +. ........+|...|++++|+ .+.+++++.||.|++||+.+++.
T Consensus 56 ~las~s~d~~~~wd~~v~~~~~~~~~-------~~-~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~ 127 (357)
T 4g56_B 56 LLLAASSLSSRTWGGSIWVFKDPEGA-------PN-ESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKES 127 (357)
T ss_dssp EEEEEECSSSSSCCEEEEEESSCC----------C-GGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC-------
T ss_pred EEEEEcCCCCccccCeEEEEECCCCC-------cc-eeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccce
Confidence 4778876 6788999876521 11 11223334689999999999 66788899999999999998765
Q ss_pred ee----EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCC-CEEEEEe
Q 019326 75 LG----AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG-KLALTVG 149 (343)
Q Consensus 75 ~~----~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~ 149 (343)
.. ...+| ...|++++|+|++ ++|++|+.|++|++||+++++++..+.+|...|.+++|+|++ .++++++
T Consensus 128 ~~~~~~~~~~h-~~~V~~v~~spdg-----~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~ 201 (357)
T 4g56_B 128 LLVNKFAKYEH-DDIVKTLSVFSDG-----TQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCG 201 (357)
T ss_dssp -CCCCEEECCC-SSCEEEEEECSSS-----SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEE
T ss_pred eEEEeeccCCC-CCCEEEEEECCCC-----CEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeec
Confidence 43 23467 8999999999999 899999999999999999999999999999999999999987 4789999
Q ss_pred CCCeEEEEEccCCceeEEEEc---CCcceEEEEeCCC-CEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-C
Q 019326 150 RDDCLAMVNLVRGRRSFYHKI---GKEASLIKFDGSG-EKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-N 222 (343)
Q Consensus 150 ~d~~i~~wd~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~ 222 (343)
.|+.|++||+++++....... ...+.+++|+|++ .+++++ .++.|++||+++++.+..+. |...|.+++|++ +
T Consensus 202 ~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~ 281 (357)
T 4g56_B 202 EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHS 281 (357)
T ss_dssp TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSS
T ss_pred cCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCC
Confidence 999999999999886654432 3568899999975 567777 89999999999999988887 788999999984 3
Q ss_pred -CeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEe-cCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 223 -GVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLT-KNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 223 -~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.+|++|+.|++|+|||+++++.+..+ +|...|++++|+| ++. +|+|++.||+|++|++.+.
T Consensus 282 ~~~lasgs~D~~i~iwd~~~~~~~~~~--~H~~~V~~vafsP~d~~---------~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 282 SPFLASISEDCTVAVLDADFSEVFRDL--SHRDFVTGVAWSPLDHS---------KFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SCCEEEEETTSCEEEECTTSCEEEEEC--CCSSCEEEEEECSSSTT---------EEEEEETTSCEEEEECC--
T ss_pred CCEEEEEeCCCEEEEEECCCCcEeEEC--CCCCCEEEEEEeCCCCC---------EEEEEcCCCeEEEEECCCC
Confidence 58999999999999999999877665 5999999999998 455 9999999999999999764
No 30
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.2e-42 Score=298.62 Aligned_cols=293 Identities=15% Similarity=0.231 Sum_probs=258.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHH 81 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 81 (343)
.|++|+.||.|++||+.+ .+.+..+.+|..+|.+++|+++.+++|+.||.|++||+.+++.+..+..|
T Consensus 131 ~l~sg~~dg~i~vwd~~~------------~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h 198 (445)
T 2ovr_B 131 RIVSGSDDNTLKVWSAVT------------GKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 198 (445)
T ss_dssp EEEEEETTSCEEEEETTT------------CCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEEEEECCCcEEEEECCC------------CcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCC
Confidence 489999999999999987 34567788999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccC
Q 019326 82 ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR 161 (343)
Q Consensus 82 ~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~ 161 (343)
...|.++.|++ +.+++|+.||+|++||+.+++.+..+.+|...|.+++| +++++++++.||.|++||+++
T Consensus 199 -~~~v~~~~~~~-------~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 199 -TSTVRCMHLHE-------KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 268 (445)
T ss_dssp -SSCEEEEEEET-------TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGG
T ss_pred -CCcEEEEEecC-------CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCC
Confidence 99999999963 47999999999999999999999999999999999999 678999999999999999999
Q ss_pred CceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEE
Q 019326 162 GRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWD 238 (343)
Q Consensus 162 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d 238 (343)
++.+.... +...+.++.+ ++.+++++ .|+.|++||+++++.+..+. |...+.++.+ +++++++|+.||.|++||
T Consensus 269 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd 345 (445)
T 2ovr_B 269 ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDNILVSGNADSTVKIWD 345 (445)
T ss_dssp TEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE-ETTEEEEEETTSCEEEEE
T ss_pred CcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE-eCCEEEEEeCCCeEEEEE
Confidence 98776655 4567888888 78888888 89999999999999998887 7778888888 567999999999999999
Q ss_pred CCCCceeEEeccc---ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCc-ccccccccceeEE
Q 019326 239 TNSGKVAYCIEDA---HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLP-LAEAKTNSRLTCL 314 (343)
Q Consensus 239 ~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~i~~~ 314 (343)
+++++.+..+. . |...|.++++++ . +|++++.||.|++||+++++...... .....+.+.|.++
T Consensus 346 ~~~~~~~~~~~-~~~~~~~~v~~~~~~~--~---------~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 413 (445)
T 2ovr_B 346 IKTGQCLQTLQ-GPNKHQSAVTCLQFNK--N---------FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 413 (445)
T ss_dssp TTTCCEEEEEC-STTSCSSCEEEEEECS--S---------EEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEE
T ss_pred CCCCcEEEEEc-cCCCCCCCEEEEEECC--C---------EEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEE
Confidence 99999999887 5 889999999964 3 99999999999999999875332221 1123556789999
Q ss_pred EcCCCCceeccccCCCC
Q 019326 315 AGSSTKSFKRPQIGDSA 331 (343)
Q Consensus 315 ~~s~~~~~~~~~~~~~~ 331 (343)
+++|++.+++.+..++.
T Consensus 414 ~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 414 RASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EECSSEEEEEEECSSSS
T ss_pred EecCCEEEEEEcccCCC
Confidence 99999999999999986
No 31
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.4e-43 Score=302.20 Aligned_cols=305 Identities=13% Similarity=0.082 Sum_probs=247.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.||.|++||+.. ......+..| ..+....|+ +++|++|+.||.|++||+.+++....+.
T Consensus 70 ~l~~~~~d~~v~i~d~~~------------~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 70 HLYKARLDGHDFLFNTII------------RDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp TEEEEEETTEEEEEECCS------------EETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred eEEEEEcCCcEEEEEecc------------cceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 488999999999999876 2223333444 333333555 8899999999999999999999988888
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
.| ...|.+++|+|++ ++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 137 ~h-~~~v~~~~~~~~~-----~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 137 AH-VSEITKLKFFPSG-----EALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp SS-SSCEEEEEECTTS-----SEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred cc-cCccEEEEECCCC-----CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 88 9999999999998 79999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeEEEEc----C---------------------CcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec--CC
Q 019326 160 VRGRRSFYHKI----G---------------------KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD--GK 211 (343)
Q Consensus 160 ~~~~~~~~~~~----~---------------------~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~--~~ 211 (343)
++++....... . ..+..++|+|++++++++ .++.|++||+++++....+. |.
T Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 290 (420)
T 3vl1_A 211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT 290 (420)
T ss_dssp TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS
T ss_pred CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC
Confidence 99987766653 1 334445567899999999 89999999999998887775 67
Q ss_pred cceEEeeecC-CC-eEEEEeCCCcEEEEECCCCce-eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEE
Q 019326 212 KRILCAAPGE-NG-VLFTGGEDRSITAWDTNSGKV-AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICV 288 (343)
Q Consensus 212 ~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~v 288 (343)
..+.+++|++ +. +|++|+.||.|++||+++++. +..+...|...|.++.+ +++. +|++++.||.|++
T Consensus 291 ~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~---------~l~s~~~d~~v~i 360 (420)
T 3vl1_A 291 CSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGA---------LFVSSGFDTSIKL 360 (420)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTE---------EEEEETTTEEEEE
T ss_pred CCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCC---------EEEEecCCccEEE
Confidence 8899999995 44 899999999999999998754 77777347888888855 4554 9999999999999
Q ss_pred EeccCccccC-----CCcccccccccceeEEEcCCCCc---eeccccCCCCCCCc
Q 019326 289 WDVRMAIKEK-----PLPLAEAKTNSRLTCLAGSSTKS---FKRPQIGDSAPKGE 335 (343)
Q Consensus 289 wd~~~~~~~~-----~~~~~~~~~~~~i~~~~~s~~~~---~~~~~~~~~~~~~~ 335 (343)
|++..+.... ..+.....+...|.+++|+|++. .+++...++....+
T Consensus 361 w~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~ 415 (420)
T 3vl1_A 361 DIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALY 415 (420)
T ss_dssp EEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEE
T ss_pred EeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEE
Confidence 9998753221 11222334566799999999999 55555555544433
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.2e-43 Score=298.09 Aligned_cols=267 Identities=15% Similarity=0.231 Sum_probs=231.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe------
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS------ 73 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~------ 73 (343)
.|++|+.||.|++||+.+ ......+.+|...|.+++|+ +++|++|+.|+.+++||+.+..
T Consensus 80 ~l~s~s~D~~v~iWd~~~------------~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~ 147 (380)
T 3iz6_a 80 WIVSASQDGRLIVWNALT------------SQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNM 147 (380)
T ss_dssp CEEEEETTSEEEEEETTT------------TEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSS
T ss_pred EEEEEeCCCeEEEEECCC------------CccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCc
Confidence 489999999999999876 35567778999999999999 8999999999999999987532
Q ss_pred -eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee-----eeccccEEEEEEec-CCCEEE
Q 019326 74 -SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV-----KVHKKGVNDLAVHH-SGKLAL 146 (343)
Q Consensus 74 -~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~i~~~~-~~~~l~ 146 (343)
....+.+| ...|.++.|.|++ +..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++++|+
T Consensus 148 ~~~~~~~gh-~~~v~~~~~~~~~----~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 222 (380)
T 3iz6_a 148 PVSRVLTGH-KGYASSCQYVPDQ----ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFI 222 (380)
T ss_dssp TTCCBCCCC-SSCCCCCBCCSSS----SSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEE
T ss_pred cceeeccCC-CcceEEEEEecCC----CCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEE
Confidence 34456788 8999999999976 267999999999999999999888777 57889999999987 789999
Q ss_pred EEeCCCeEEEEEccCC-ceeEE-EEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCC--------cceE
Q 019326 147 TVGRDDCLAMVNLVRG-RRSFY-HKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGK--------KRIL 215 (343)
Q Consensus 147 ~~~~d~~i~~wd~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~--------~~i~ 215 (343)
+|+.|++|++||++.. +.+.. ..+...|.+++|+|++++++++ .|+.|++||+++++.+..+... ..+.
T Consensus 223 sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~ 302 (380)
T 3iz6_a 223 SGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVT 302 (380)
T ss_dssp EEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCS
T ss_pred EEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceE
Confidence 9999999999999844 44433 3456789999999999999999 9999999999999988877521 2388
Q ss_pred Eeeec-CCCeEEEEeCCCcEEEEECCCCceeEEec---ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 216 CAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIE---DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 216 ~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
+++|+ ++.++++|+.||.|++||..+++.+..+. .+|...|++++|+|++. +|++|+.||+|++|++
T Consensus 303 ~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~---------~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 303 SVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGS---------ALCTGSWDKNLKIWAF 373 (380)
T ss_dssp EEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSS---------EEEEECTTSCEEEEEC
T ss_pred EEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCC---------EEEEeeCCCCEEEEec
Confidence 99998 56899999999999999999998887772 37999999999999988 9999999999999999
Q ss_pred cCc
Q 019326 292 RMA 294 (343)
Q Consensus 292 ~~~ 294 (343)
...
T Consensus 374 ~~~ 376 (380)
T 3iz6_a 374 SGH 376 (380)
T ss_dssp CSS
T ss_pred CCC
Confidence 864
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.6e-41 Score=289.78 Aligned_cols=268 Identities=19% Similarity=0.271 Sum_probs=225.9
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecC------------------CCCCeEEEEec--CceEEEeeCCC
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPA------------------HLSPITTVAVS--GTAAASGGTDD 62 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~------------------h~~~v~~l~~~--~~~l~s~~~dg 62 (343)
|++|+ ++.+++|++... . .+..+.. +...|++++|+ +++|++|+.|+
T Consensus 79 la~g~-~~~v~i~~~~~g-------~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~ 145 (393)
T 1erj_A 79 LATGC-NKTTQVYRVSDG-------S-----LVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDR 145 (393)
T ss_dssp EEEEC-BSCEEEEETTTC-------C-----EEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTS
T ss_pred EEEEc-CCcEEEEEecCC-------C-----EEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCC
Confidence 55655 789999998762 1 1222222 33459999998 88999999999
Q ss_pred eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEec-C
Q 019326 63 TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH-S 141 (343)
Q Consensus 63 ~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~-~ 141 (343)
.|++||+.+++.+..+.+| ...|.+++|+|++ ++|++++.|++|++||++++++...+. +...+.+++|+| +
T Consensus 146 ~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~p~~-----~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQGH-EQDIYSLDYFPSG-----DKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGD 218 (393)
T ss_dssp CEEEEETTTTEEEEEECCC-SSCEEEEEECTTS-----SEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTT
T ss_pred eEEEEECCCCcEEEEEccC-CCCEEEEEEcCCC-----CEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCC
Confidence 9999999999999999999 8999999999998 799999999999999999988887776 667899999999 8
Q ss_pred CCEEEEEeCCCeEEEEEccCCceeEEE--------EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccce---------
Q 019326 142 GKLALTVGRDDCLAMVNLVRGRRSFYH--------KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAK--------- 203 (343)
Q Consensus 142 ~~~l~~~~~d~~i~~wd~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~--------- 203 (343)
+++|++++.|+.|++||+++++.+... .+...+.+++|+|++++++++ .|+.|++||+++..
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 298 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 298 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCC
Confidence 899999999999999999998866544 245679999999999999999 89999999997643
Q ss_pred ---eEEEe-cCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEE
Q 019326 204 ---LLCEL-DGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVA 278 (343)
Q Consensus 204 ---~~~~~-~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~ 278 (343)
....+ .|...|.+++++ ++.+|++|+.|+.|++||..+++++..+. +|...|.++++++... +.+++.+|+
T Consensus 299 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~-~h~~~v~~v~~~~~~~---~~p~~~~l~ 374 (393)
T 1erj_A 299 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ-GHRNSVISVAVANGSS---LGPEYNVFA 374 (393)
T ss_dssp --CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSCT---TCTTCEEEE
T ss_pred CCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC-CCCCCEEEEEecCCcC---cCCCCCEEE
Confidence 22333 377889999998 46799999999999999999999999998 9999999999987542 345667999
Q ss_pred EEcCCCcEEEEeccCc
Q 019326 279 SASSDGVICVWDVRMA 294 (343)
Q Consensus 279 s~~~dg~i~vwd~~~~ 294 (343)
+|+.||+|++|+++..
T Consensus 375 sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 375 TGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEETTSEEEEEEEEEC
T ss_pred EECCCCcEEECccccc
Confidence 9999999999999753
No 34
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-43 Score=301.55 Aligned_cols=307 Identities=16% Similarity=0.130 Sum_probs=256.8
Q ss_pred ccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCC----CeeeeEecc
Q 019326 7 SYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLST----SSSLGAIHH 80 (343)
Q Consensus 7 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~ 80 (343)
+.|+.|++||+... ... .+...+ .|...|++++|+ +.+|++|+.||.|++||+.+ .+.+..+..
T Consensus 42 ~~d~~v~iw~~~~~-------~~~--~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~ 111 (416)
T 2pm9_A 42 STDSSLELWSLLAA-------DSE--KPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSN 111 (416)
T ss_dssp CCCCCCEEEESSSG-------GGC--SCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCC
T ss_pred CCCCeEEEEEccCC-------CCC--cEEEEE-ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccC
Confidence 88999999999862 111 122333 589999999998 88999999999999999987 457788888
Q ss_pred CCCCCeEEEEEeCC-CCCCCCceEEEeeCCCeEEEEECCCcc------eee---eeeeccccEEEEEEecC-CCEEEEEe
Q 019326 81 HESSSVTSLAFYTP-QNLSVPRNLFSTSADGFVSIFDADPFV------LLT---SVKVHKKGVNDLAVHHS-GKLALTVG 149 (343)
Q Consensus 81 ~~~~~v~~l~~~~~-~~~~~~~~l~s~~~dg~i~iwd~~~~~------~~~---~~~~~~~~v~~i~~~~~-~~~l~~~~ 149 (343)
| ...|.+++|+|+ + ++|++++.|+.|++||+.+++ ... .+..|...|.+++|+|+ +.+|++++
T Consensus 112 h-~~~v~~~~~~~~~~-----~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 185 (416)
T 2pm9_A 112 H-SSSVKTVKFNAKQD-----NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG 185 (416)
T ss_dssp S-SSCCCEEEECSSST-----TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES
T ss_pred C-ccceEEEEEcCCCC-----CEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc
Confidence 8 899999999998 5 799999999999999998876 332 33678899999999999 78999999
Q ss_pred CCCeEEEEEccCCceeEEEEc-------CCcceEEEEeCCC-CEEEEE-eCC---cEEEEEcccc-eeEEEec--CCcce
Q 019326 150 RDDCLAMVNLVRGRRSFYHKI-------GKEASLIKFDGSG-EKFFMV-TEE---KVGIHQAEDA-KLLCELD--GKKRI 214 (343)
Q Consensus 150 ~d~~i~~wd~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~-~~~---~i~~~d~~~~-~~~~~~~--~~~~i 214 (343)
.|+.|++||+++++....... ...+.+++|+|++ .+++++ .++ .|++||++++ .....+. |...+
T Consensus 186 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v 265 (416)
T 2pm9_A 186 SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGI 265 (416)
T ss_dssp SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCE
T ss_pred CCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCce
Confidence 999999999999988776665 5679999999997 577777 676 9999999986 5666665 78899
Q ss_pred EEeeecC--CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecC-CCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 215 LCAAPGE--NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKN-DGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 215 ~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
.+++|++ +.+|++++.||.|++||+++++.+..+. +|...|.+++|+|++ . +|++++.||.|++||+
T Consensus 266 ~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~---------~l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 266 LSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP-ARGNWCFKTKFAPEAPD---------LFACASFDNKIEVQTL 335 (416)
T ss_dssp EEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE-CSSSCCCCEEECTTCTT---------EEEECCSSSEEEEEES
T ss_pred eEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec-CCCCceEEEEECCCCCC---------EEEEEecCCcEEEEEc
Confidence 9999985 6799999999999999999999999999 999999999999987 5 9999999999999999
Q ss_pred cCccccCCCcc------------c-------------------ccccccceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 292 RMAIKEKPLPL------------A-------------------EAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 292 ~~~~~~~~~~~------------~-------------------~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
.+......... . ...+..++.+++|++++++++.+..++.++.++...
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 336 QNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp CCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred cCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 87643221100 0 000345678999999999999999999999887654
No 35
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-41 Score=293.50 Aligned_cols=311 Identities=11% Similarity=0.123 Sum_probs=258.7
Q ss_pred eeEEeccCCeEEEEEe----ecCCCCCCCCcc-eeeEEeEEecC----------CCCCeEEEEec--CceEEEeeCCCeE
Q 019326 2 SLIAGSYEKFIWGYKL----KPSNHYSSDQKT-LTLTQLFSYPA----------HLSPITTVAVS--GTAAASGGTDDTI 64 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~----~~~~~~~~~~~~-~~~~~~~~~~~----------h~~~v~~l~~~--~~~l~s~~~dg~i 64 (343)
.|++|+.||.|++|++ .. +.. ........+.. |.+.|++++|+ +++|++|+.||.|
T Consensus 60 ~l~~~~~dg~i~iw~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 132 (425)
T 1r5m_A 60 ILAYGEKNSVARLARIVETDQE-------GKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGEL 132 (425)
T ss_dssp EEEEEETBTEEEEEEEEEC-------------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEecCCceEEEEEEecccCC-------ccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeE
Confidence 5899999999999999 55 221 11112222222 68899999999 8899999999999
Q ss_pred EEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecccc------------
Q 019326 65 HLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKG------------ 132 (343)
Q Consensus 65 ~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------------ 132 (343)
++|| .+++.+..+..| ...|.+++|+|++ ++|++++.|+.|++||+.+++.+..+..+...
T Consensus 133 ~i~~-~~~~~~~~~~~~-~~~v~~~~~~~~~-----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (425)
T 1r5m_A 133 RLWN-KTGALLNVLNFH-RAPIVSVKWNKDG-----THIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGD 205 (425)
T ss_dssp EEEE-TTSCEEEEECCC-CSCEEEEEECTTS-----SEEEEEETTCCEEEEETTTTEEEEEECCC---------------
T ss_pred EEEe-CCCCeeeeccCC-CccEEEEEECCCC-----CEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCC
Confidence 9999 678888899988 8999999999998 79999999999999999999999888877776
Q ss_pred ---EEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE-EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEE
Q 019326 133 ---VNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH-KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCE 207 (343)
Q Consensus 133 ---v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~ 207 (343)
+.+++|+|++ .+++++.++.|++||+++++..... .+...+.+++|+|++++++++ .++.+++||+++++....
T Consensus 206 ~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 284 (425)
T 1r5m_A 206 GSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNC 284 (425)
T ss_dssp CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEE
T ss_pred cceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceE
Confidence 9999999985 6889999999999999998776555 356789999999999999999 799999999999988888
Q ss_pred ec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcE
Q 019326 208 LD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVI 286 (343)
Q Consensus 208 ~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i 286 (343)
+. |...+.+++|++++++++++.||.|++||+++++.+..+. .|...|.+++|+|++. +|++++.||.|
T Consensus 285 ~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~s~~~~---------~l~~~~~dg~i 354 (425)
T 1r5m_A 285 FYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSI-VDGVPIFAGRISQDGQ---------KYAVAFMDGQV 354 (425)
T ss_dssp ECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEE-CTTCCEEEEEECTTSS---------EEEEEETTSCE
T ss_pred ecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecc-cCCccEEEEEEcCCCC---------EEEEEECCCeE
Confidence 87 8889999999966699999999999999999999999998 8999999999999887 99999999999
Q ss_pred EEEeccCccccC---------------CCccccccc--cc-ceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 287 CVWDVRMAIKEK---------------PLPLAEAKT--NS-RLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 287 ~vwd~~~~~~~~---------------~~~~~~~~~--~~-~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
++||+++..... ...+..+.. .. .|.+++|++++.+++.+..++.+..++.
T Consensus 355 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 355 NVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp EEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred EEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEee
Confidence 999998764100 001222222 23 8999999999999999999998876654
No 36
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.2e-40 Score=280.12 Aligned_cols=272 Identities=19% Similarity=0.250 Sum_probs=238.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.|+.|++||+.. .+.....+...+.+|..+|++++|+ +++|++++.|+.|++|+...........
T Consensus 53 ~l~S~s~D~~i~vWd~~~-------~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~ 125 (340)
T 4aow_A 53 MILSASRDKTIIMWKLTR-------DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV 125 (340)
T ss_dssp EEEEEETTSCEEEEEECC-------SSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEEcCCCeEEEEECCC-------CCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeec
Confidence 478999999999999987 3344456778889999999999998 8999999999999999999998888888
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc-eeeeeeeccccEEEEEEecCC--CEEEEEeCCCeEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV-LLTSVKVHKKGVNDLAVHHSG--KLALTVGRDDCLAM 156 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~i~~~~~~--~~l~~~~~d~~i~~ 156 (343)
.+ ...+..+.+++.+ .+|++++.|+.+++||..... ......+|...+..++|++++ .++++++.|+.|++
T Consensus 126 ~~-~~~~~~~~~~~~~-----~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i 199 (340)
T 4aow_A 126 GH-TKDVLSVAFSSDN-----RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 199 (340)
T ss_dssp CC-SSCEEEEEECTTS-----SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred CC-CCceeEEEEeecC-----ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEE
Confidence 88 8899999999998 799999999999999997644 334456788999999998865 57889999999999
Q ss_pred EEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcE
Q 019326 157 VNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSI 234 (343)
Q Consensus 157 wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i 234 (343)
||+++++...... +...+.+++|+|++++++++ .|+.|++||+++.+.+..+.+...+.++.+++++.+++++.|+.|
T Consensus 200 ~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i 279 (340)
T 4aow_A 200 WNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSI 279 (340)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEE
T ss_pred EECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEE
Confidence 9999988766554 45789999999999999999 899999999999999999999999999999988888899999999
Q ss_pred EEEECCCCceeEEec--------ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 235 TAWDTNSGKVAYCIE--------DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 235 ~i~d~~~~~~~~~~~--------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
++||++++..+..+. .+|...|++++|+|++. +|++|+.||.|+|||+++|.
T Consensus 280 ~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~---------~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 280 KIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ---------TLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS---------EEEEEETTSCEEEEEEEC--
T ss_pred EEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC---------EEEEEeCCCEEEEEeCCCcC
Confidence 999999887766554 26889999999999887 99999999999999999874
No 37
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.1e-41 Score=282.53 Aligned_cols=276 Identities=15% Similarity=0.183 Sum_probs=241.6
Q ss_pred ecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeee---Eec--cCCCCCeEEEEEeCCCCCCCCceEEEeeCCC
Q 019326 38 YPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLG---AIH--HHESSSVTSLAFYTPQNLSVPRNLFSTSADG 110 (343)
Q Consensus 38 ~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~---~~~--~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg 110 (343)
..+|..+|++++|+ +++|++++ ||.|++||+.+++... .+. .| ...|.+++|+|++ ++|++++.||
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~-----~~l~~~~~d~ 119 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNR-DNYIRSCKLLPDG-----CTLIVGGEAS 119 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCT-TSBEEEEEECTTS-----SEEEEEESSS
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCC-CCcEEEEEEcCCC-----CEEEEEcCCC
Confidence 34799999999999 78899988 9999999998775333 332 56 8999999999998 7999999999
Q ss_pred eEEEEECCCcc--eeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEE
Q 019326 111 FVSIFDADPFV--LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 111 ~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 187 (343)
.|++||+.+++ ....+..|...|.+++|+|+++++++++.||.|++||+++++...... +...+.+++|+|+++.++
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 199 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLW 199 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred cEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEE
Confidence 99999998876 667778899999999999999999999999999999999988776655 467899999999999999
Q ss_pred EE-eCCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecC
Q 019326 188 MV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKN 265 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~ 265 (343)
++ .++.+++||+++++....+.+...+.+++++ +++++++++.++.|++||+++++.. .+. .|...|.+++|+|++
T Consensus 200 ~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~-~~~~~v~~~~~~~~~ 277 (337)
T 1gxr_A 200 TGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLH-LHESCVLSLKFAYCG 277 (337)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EEC-CCSSCEEEEEECTTS
T ss_pred EEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEc-CCccceeEEEECCCC
Confidence 99 8999999999999999999999999999998 4679999999999999999988754 555 799999999999988
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCcc
Q 019326 266 DGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEE 336 (343)
Q Consensus 266 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~ 336 (343)
. +|++++.||.|++||+.++.. +....+...+.++++++++.+++.+..++.++.++
T Consensus 278 ~---------~l~~~~~dg~i~~~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 278 K---------WFVSTGKDNLLNAWRTPYGAS-----IFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp S---------EEEEEETTSEEEEEETTTCCE-----EEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred C---------EEEEecCCCcEEEEECCCCeE-----EEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 7 999999999999999998642 23345567899999999999999999998776554
No 38
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.6e-40 Score=277.57 Aligned_cols=266 Identities=16% Similarity=0.236 Sum_probs=235.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe--eeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS--SLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~ 77 (343)
.|++++ ||.|++|++... ............+|..+|++++|+ +++|++++.||.|++||+.+++ ....
T Consensus 65 ~l~~~~-dg~i~iw~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 136 (337)
T 1gxr_A 65 HVYTGG-KGCVKVWDISHP-------GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAE 136 (337)
T ss_dssp EEEEEC-BSEEEEEETTST-------TCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEE
T ss_pred EEEEcC-CCeEEEEECCCC-------CceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeee
Confidence 356666 999999999862 222222222334799999999999 7899999999999999999887 5667
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEE
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMV 157 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~w 157 (343)
+..| ...|.+++|+|++ +++++++.||.|++||+++++.+..+..|...|.+++|+|++++|++++.|+.|++|
T Consensus 137 ~~~~-~~~i~~~~~~~~~-----~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~ 210 (337)
T 1gxr_A 137 LTSS-APACYALAISPDS-----KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSW 210 (337)
T ss_dssp EECS-SSCEEEEEECTTS-----SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cccC-CCceEEEEECCCC-----CEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEE
Confidence 7778 8899999999998 799999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEeCCCcEE
Q 019326 158 NLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGGEDRSIT 235 (343)
Q Consensus 158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~ 235 (343)
|+++++..........+.+++|+|+++.++++ .++.+++||+++.+......|...+.+++|++ +++|++++.||.|+
T Consensus 211 d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 290 (337)
T 1gxr_A 211 DLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLN 290 (337)
T ss_dssp ETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEE
Confidence 99999988888888999999999999999999 89999999999988876666899999999994 67999999999999
Q ss_pred EEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 236 i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+||+.+++.+.... |...|.+++|+|++. +|++++.||.|++|++.
T Consensus 291 ~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~---------~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 291 AWRTPYGASIFQSK--ESSSVLSCDISVDDK---------YIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEETTTCCEEEEEE--CSSCEEEEEECTTSC---------EEEEEETTSCEEEEEEE
T ss_pred EEECCCCeEEEEec--CCCcEEEEEECCCCC---------EEEEecCCCeEEEEEEe
Confidence 99999998886654 899999999999887 99999999999999974
No 39
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.2e-40 Score=290.37 Aligned_cols=292 Identities=15% Similarity=0.220 Sum_probs=249.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
.|++|+.||.|++||+.+ .+.+..+.+|.++|++++|+ +..|++|+.||.|++||+.+++.+..+.+
T Consensus 134 ~l~sgs~dg~i~vwd~~~------------~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 201 (464)
T 3v7d_B 134 YVITGADDKMIRVYDSIN------------KKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEG 201 (464)
T ss_dssp EEEEEETTSCEEEEETTT------------TEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEEcCCCcEEEEECCC------------CcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECC
Confidence 489999999999999887 45677788999999999999 56999999999999999999999999999
Q ss_pred CCCCCeEEEEEeC--CCCCCCCceEEEeeCCCeEEEEECCCcce-----------------------eeeeeeccccEEE
Q 019326 81 HESSSVTSLAFYT--PQNLSVPRNLFSTSADGFVSIFDADPFVL-----------------------LTSVKVHKKGVND 135 (343)
Q Consensus 81 ~~~~~v~~l~~~~--~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----------------------~~~~~~~~~~v~~ 135 (343)
| ...|.+++|++ ++ .++++|+.||+|++||+.+.+. +..+.+|...|.+
T Consensus 202 h-~~~v~~l~~~~~~~~-----~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 275 (464)
T 3v7d_B 202 H-NSTVRCLDIVEYKNI-----KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT 275 (464)
T ss_dssp C-SSCEEEEEEEESSSC-----EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEE
T ss_pred C-CCccEEEEEecCCCC-----CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEE
Confidence 9 99999999994 55 7999999999999999977542 4566778888887
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCc
Q 019326 136 LAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKK 212 (343)
Q Consensus 136 i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~ 212 (343)
+ +++++++++++.|+.|++||+++++.+.... +...+.+++|+|+++.++++ .|+.|++||+++++.+..+. |..
T Consensus 276 ~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~ 353 (464)
T 3v7d_B 276 V--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTA 353 (464)
T ss_dssp E--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred E--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCC
Confidence 7 5678899999999999999999988776654 46789999999999999999 89999999999999999887 888
Q ss_pred ceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 213 RILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 213 ~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
.+.++.++ ++++++++.||.|++||+++++...... |...+..+++++++. ++++++ ||.|++||++
T Consensus 354 ~v~~~~~~-~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~---------~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 354 LVGLLRLS-DKFLVSAAADGSIRGWDANDYSRKFSYH--HTNLSAITTFYVSDN---------ILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp CEEEEEEC-SSEEEEEETTSEEEEEETTTCCEEEEEE--CTTCCCEEEEEECSS---------EEEEEE-TTEEEEEETT
T ss_pred cEEEEEEc-CCEEEEEeCCCcEEEEECCCCceeeeec--CCCCccEEEEEeCCC---------EEEEec-CCeEEEEECC
Confidence 99999995 6899999999999999999988777665 777888899999887 899888 9999999999
Q ss_pred CccccCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 293 MAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
+++..... ...+...|.+++++ ++.+++.+..++
T Consensus 421 ~g~~~~~~---~~~~~~~v~~v~~~-~~~l~~~~~~~g 454 (464)
T 3v7d_B 421 SGKLVHAN---ILKDADQIWSVNFK-GKTLVAAVEKDG 454 (464)
T ss_dssp TCCEEESC---TTTTCSEEEEEEEE-TTEEEEEEEETT
T ss_pred CCcEEehh---hccCCCcEEEEEec-CCEEEEEEEeCC
Confidence 87543221 22346779999997 444555544444
No 40
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.8e-40 Score=277.95 Aligned_cols=290 Identities=17% Similarity=0.183 Sum_probs=243.8
Q ss_pred eeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCe-----eeeEeccCCCCCeEEEEEeCCCCCCCCce
Q 019326 31 TLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSS-----SLGAIHHHESSSVTSLAFYTPQNLSVPRN 102 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~v~~l~~~~~~~~~~~~~ 102 (343)
+.....+|+||.++|++|+|+ +++|+||+.||+|++||+.+.+ +...+.+| ...|.+++|+|++ ++
T Consensus 27 ~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h-~~~V~~~~~s~dg-----~~ 100 (340)
T 4aow_A 27 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGH-SHFVSDVVISSDG-----QF 100 (340)
T ss_dssp EEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCC-SSCEEEEEECTTS-----SE
T ss_pred ceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCC-CCCEEEEEECCCC-----CE
Confidence 355667899999999999998 5799999999999999997653 45677888 9999999999999 89
Q ss_pred EEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE--cCCcceEEEEe
Q 019326 103 LFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK--IGKEASLIKFD 180 (343)
Q Consensus 103 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~~~~~~~~ 180 (343)
|++++.|+.|++|+............+...+..+.+++++.+|++++.|+.+++||+.......... +...+..++|+
T Consensus 101 l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~ 180 (340)
T 4aow_A 101 ALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFS 180 (340)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEEC
T ss_pred EEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEc
Confidence 9999999999999999988888888888999999999999999999999999999998765543322 34678889998
Q ss_pred CCC--CEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEeccccccc
Q 019326 181 GSG--EKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSAR 255 (343)
Q Consensus 181 ~~~--~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~ 255 (343)
+++ ..++++ .|+.|++||+++++....+. |..+|.+++|++ +++|++|+.||.|++||+++.+.+..+. +...
T Consensus 181 ~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~--~~~~ 258 (340)
T 4aow_A 181 PNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDI 258 (340)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--CSSC
T ss_pred cCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec--CCce
Confidence 765 456666 89999999999999988887 788999999984 6799999999999999999999998887 5678
Q ss_pred EEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCC-----CcccccccccceeEEEcCCCCceeccccCCC
Q 019326 256 VKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKP-----LPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 256 v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-----~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
|.++.++|++ .+++++.|+.|++||+++...... .......+...|++++|+|++++++.+..|+
T Consensus 259 v~~~~~~~~~----------~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg 328 (340)
T 4aow_A 259 INALCFSPNR----------YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 328 (340)
T ss_dssp EEEEEECSSS----------SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS
T ss_pred EEeeecCCCC----------ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 9999999886 467777899999999987632211 1112224456799999999999999999999
Q ss_pred CCCCcccc
Q 019326 331 APKGEEKA 338 (343)
Q Consensus 331 ~~~~~~~~ 338 (343)
.++.++..
T Consensus 329 ~v~iW~~~ 336 (340)
T 4aow_A 329 LVRVWQVT 336 (340)
T ss_dssp CEEEEEEE
T ss_pred EEEEEeCC
Confidence 98877654
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.4e-40 Score=297.94 Aligned_cols=297 Identities=20% Similarity=0.267 Sum_probs=253.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++++.|+.|++|+... +.+..+.+|..+|++++|+ +..|++++.|+.|++||.. ++.+..+.
T Consensus 235 ~l~~~~~d~~i~~w~~~~-------------~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~ 300 (577)
T 2ymu_A 235 TIASASDDKTVKLWNRNG-------------QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLT 300 (577)
T ss_dssp CEEEEETTSCEEEECTTS-------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEEC
T ss_pred EEEEEeCCCEEEEEeCCC-------------CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEe
Confidence 478999999999999643 3456678999999999998 7899999999999999964 67788888
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
+| ...|.+++|+|++ +.|++++.|++|++||... +.+..+.+|...|.+++|+|++++|++++.|+.|++||.
T Consensus 301 ~h-~~~v~~~~~~~~~-----~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~ 373 (577)
T 2ymu_A 301 GH-SSSVWGVAFSPDG-----QTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 373 (577)
T ss_dssp CC-SSCEEEEEECTTS-----SEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cC-CCCeEEEEECCCC-----CEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC
Confidence 89 8999999999998 7999999999999999865 556778889999999999999999999999999999996
Q ss_pred cCCceeE-EEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEE
Q 019326 160 VRGRRSF-YHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSIT 235 (343)
Q Consensus 160 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~ 235 (343)
. ++.+. ...+...+.+++|+|++++++++ .|+.|++||. +++.+..+. |...|.+++|++ +++|++++.|+.|+
T Consensus 374 ~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~ 451 (577)
T 2ymu_A 374 N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVK 451 (577)
T ss_dssp T-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred C-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEE
Confidence 4 44443 34456889999999999999999 8999999996 455555555 889999999994 67999999999999
Q ss_pred EEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEE
Q 019326 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLA 315 (343)
Q Consensus 236 i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~ 315 (343)
+||. +++.+..+. +|...|++++|+|++. +|++++.|+.|++||.... .. .. ...+...|++++
T Consensus 452 ~w~~-~~~~~~~~~-~~~~~v~~~~~spd~~---------~las~~~d~~i~iw~~~~~-~~---~~-~~~h~~~v~~l~ 515 (577)
T 2ymu_A 452 LWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQ---------TIASASDDKTVKLWNRNGQ-LL---QT-LTGHSSSVRGVA 515 (577)
T ss_dssp EEET-TSCEEEEEE-CCSSCEEEEEECTTSC---------EEEEEETTSEEEEEETTSC-EE---EE-EECCSSCEEEEE
T ss_pred EEEC-CCCEEEEEc-CCCCCEEEEEEcCCCC---------EEEEEeCCCEEEEEcCCCC-EE---EE-EeCCCCCEEEEE
Confidence 9996 477888888 9999999999999887 9999999999999996432 11 11 123456799999
Q ss_pred cCCCCceeccccCCCCCCCccc
Q 019326 316 GSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 316 ~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
|+|++++++.+..|+.++.++.
T Consensus 516 ~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 516 FSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECT
T ss_pred EcCCCCEEEEEECcCEEEEEeC
Confidence 9999999999999998877663
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-40 Score=305.88 Aligned_cols=268 Identities=19% Similarity=0.205 Sum_probs=230.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.|+.|++|++.. ...........+.+|...|++++|+ +++|++|+.||.|++||+.+++.+..+.
T Consensus 397 ~l~s~s~D~~i~~W~~~~-------~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~ 469 (694)
T 3dm0_A 397 IIVSASRDKSIILWKLTK-------DDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV 469 (694)
T ss_dssp EEEEEETTSEEEEEECCC-------STTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCcEEEEEccC-------CCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe
Confidence 488999999999999976 2222234556778999999999999 8899999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee---eeccccEEEEEEecCC--CEEEEEeCCCeE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV---KVHKKGVNDLAVHHSG--KLALTVGRDDCL 154 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~i~~~~~~--~~l~~~~~d~~i 154 (343)
+| ...|.+++|+|++ ++|++|+.|++|++||.......... .+|...|.+++|+|++ ..+++++.|++|
T Consensus 470 ~h-~~~v~~~~~s~~~-----~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 543 (694)
T 3dm0_A 470 GH-TKDVLSVAFSLDN-----RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 543 (694)
T ss_dssp CC-SSCEEEEEECTTS-----SCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCE
T ss_pred CC-CCCEEEEEEeCCC-----CEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeE
Confidence 99 9999999999998 79999999999999998654332222 4688899999999986 689999999999
Q ss_pred EEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCC
Q 019326 155 AMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDR 232 (343)
Q Consensus 155 ~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg 232 (343)
++||+++++...... +...+.+++|+|++++++++ .|+.|++||+++++.+..+.+...+.+++|++++.+++++.++
T Consensus 544 ~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~ 623 (694)
T 3dm0_A 544 KVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEH 623 (694)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETT
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCC
Confidence 999999988765544 56789999999999999999 8999999999999999998888899999999777666667778
Q ss_pred cEEEEECCCCceeEEecccc-------------------cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 233 SITAWDTNSGKVAYCIEDAH-------------------SARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 233 ~i~i~d~~~~~~~~~~~~~h-------------------~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
.|++||+++++.+..+. .+ ...+++++|+|++. +|++|+.||.|+||++.
T Consensus 624 ~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~---------~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 624 GIKIWDLESKSIVEDLK-VDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGS---------TLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEEETTTTEEEEEEC-CCCC----------------CCCCEEEEEECTTSS---------EEEEEETTSEEEEEEC-
T ss_pred CEEEEECCCCCChhhhc-cccccccccccccccccCCceeEEeeeEEEcCCCC---------EEEEEcCCCeEEEEecc
Confidence 89999999998887765 22 12378899999887 99999999999999986
No 43
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.3e-41 Score=288.71 Aligned_cols=296 Identities=14% Similarity=0.191 Sum_probs=244.2
Q ss_pred eeeEEeEEe-cCCCCCeEEEEec------CceEEEeeCCCeEEEEEcCCCeeeeEeccC----CCCCeEEEEEeCCCCCC
Q 019326 30 LTLTQLFSY-PAHLSPITTVAVS------GTAAASGGTDDTIHLYDLSTSSSLGAIHHH----ESSSVTSLAFYTPQNLS 98 (343)
Q Consensus 30 ~~~~~~~~~-~~h~~~v~~l~~~------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~v~~l~~~~~~~~~ 98 (343)
++++....+ .+|..+|++++|+ ...+++++.++.|++||+.+++.+..+..+ +...|.+++|+|+.. .
T Consensus 5 ~~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 83 (366)
T 3k26_A 5 YSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSN-T 83 (366)
T ss_dssp CCCEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTT-T
T ss_pred eEEEEEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCC-C
Confidence 334443333 4899999999998 245777777789999999988777766543 157899999999931 0
Q ss_pred CCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEec-CCCEEEEEeCCCeEEEEEccCCceeEEE----EcCCc
Q 019326 99 VPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH-SGKLALTVGRDDCLAMVNLVRGRRSFYH----KIGKE 173 (343)
Q Consensus 99 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~----~~~~~ 173 (343)
.+.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++..... .+...
T Consensus 84 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 163 (366)
T 3k26_A 84 SHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE 163 (366)
T ss_dssp CCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC
T ss_pred CCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc
Confidence 016899999999999999999999999999999999999999 8999999999999999999999887775 46688
Q ss_pred ceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-----------------------------CCcceEEeeecCCC
Q 019326 174 ASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-----------------------------GKKRILCAAPGENG 223 (343)
Q Consensus 174 ~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-----------------------------~~~~i~~~~~~~~~ 223 (343)
+.+++|+|++.+++++ .|+.|++||+++++....+. |...|.+++|+ ++
T Consensus 164 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~ 242 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GD 242 (366)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TT
T ss_pred eeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CC
Confidence 9999999999999999 89999999999876544332 78889999997 78
Q ss_pred eEEEEeCCCcEEEEECCCCce--------------eEEecccccccEEEEEEEec--CCCCCCCCCCeEEEEEcCCCcEE
Q 019326 224 VLFTGGEDRSITAWDTNSGKV--------------AYCIEDAHSARVKGIVVLTK--NDGGSTAENPYLVASASSDGVIC 287 (343)
Q Consensus 224 ~l~~~~~dg~i~i~d~~~~~~--------------~~~~~~~h~~~v~~~~~~~~--~~~~~~~~~~~~l~s~~~dg~i~ 287 (343)
++++++.||.|++||+++++. +..+. .|...|++++|+++ +. +|++++.||.|+
T Consensus 243 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~---------~l~~~~~dg~i~ 312 (366)
T 3k26_A 243 LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD-YSQCDIWYMRFSMDFWQK---------MLALGNQVGKLY 312 (366)
T ss_dssp EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE-CSSCCSSCCCCEECTTSS---------EEEEECTTSCEE
T ss_pred EEEEEecCCEEEEEeCCCccccccccccCCcchheecccc-ccCCcEEEEEEcCCCCCc---------EEEEEecCCcEE
Confidence 999999999999999987754 67777 89999999999998 66 999999999999
Q ss_pred EEeccCccccCCCc--ccccccccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 288 VWDVRMAIKEKPLP--LAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 288 vwd~~~~~~~~~~~--~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
+||++++....... +....+...|.+++|++++.+++.+..|+.++.++.
T Consensus 313 vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 313 VWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp EEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred EEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 99999874332111 111122578999999999999999999998776553
No 44
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4e-40 Score=282.90 Aligned_cols=281 Identities=14% Similarity=0.140 Sum_probs=235.2
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-C--------ceEEEeeCCCeEEEEEcCCC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-G--------TAAASGGTDDTIHLYDLSTS 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~--------~~l~s~~~dg~i~iwd~~~~ 72 (343)
.|++|+.||.|++|++..... .........+.+|..+|++++|+ . .+|++++.||.|++||+.++
T Consensus 28 ~l~s~~~dg~i~iw~~~~~~~------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~ 101 (397)
T 1sq9_A 28 FTVSCSGDGYLKVWDNKLLDN------ENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITRE 101 (397)
T ss_dssp EEEEEETTSEEEEEESBCCTT------CCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEEC
T ss_pred eEEEEcCCCEEEEEECCCccc------ccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCC
Confidence 589999999999999987321 11123456667999999999998 4 69999999999999999988
Q ss_pred ee-----eeEeccCC----CCCeEEEEEe----CCCCCCCCce-EEEeeCCCeEEEEECCC------cceee-----eee
Q 019326 73 SS-----LGAIHHHE----SSSVTSLAFY----TPQNLSVPRN-LFSTSADGFVSIFDADP------FVLLT-----SVK 127 (343)
Q Consensus 73 ~~-----~~~~~~~~----~~~v~~l~~~----~~~~~~~~~~-l~s~~~dg~i~iwd~~~------~~~~~-----~~~ 127 (343)
+. +..+..|. ...|.+++|+ |++ ++ |++++.||.|++||+.+ ++.+. .+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 176 (397)
T 1sq9_A 102 DETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-----SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQ 176 (397)
T ss_dssp TTTCCEEEEEECCSCTTGGGSCEEEEEEECCC---------CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEE
T ss_pred cccccccceeecccccccCCCcEEEEEEeeccCCCC-----ceEEEEEeCCCcEEEEeCCccccccccceeeccCcceee
Confidence 87 78888772 3899999999 888 78 99999999999999988 77776 774
Q ss_pred e-------ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-------CCcceEEEEeCCCCEEEEE-eC-
Q 019326 128 V-------HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-------GKEASLIKFDGSGEKFFMV-TE- 191 (343)
Q Consensus 128 ~-------~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~- 191 (343)
+ |...|.+++|+|++ ++++++.|+.|++||+++++.+..... ...+.+++|+|++++++++ .+
T Consensus 177 ~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~ 255 (397)
T 1sq9_A 177 GTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN 255 (397)
T ss_dssp EEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET
T ss_pred eeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC
Confidence 4 88899999999999 999999999999999999988877775 7889999999999999999 78
Q ss_pred --CcEEEEEcccceeEEEec--------------CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecc----
Q 019326 192 --EKVGIHQAEDAKLLCELD--------------GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIED---- 250 (343)
Q Consensus 192 --~~i~~~d~~~~~~~~~~~--------------~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---- 250 (343)
+.|++||+++++.+..+. |...|.+++|+ ++++|++++.||.|++||+++++.+..+..
T Consensus 256 ~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 335 (397)
T 1sq9_A 256 SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDD 335 (397)
T ss_dssp TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGG
T ss_pred CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCc
Confidence 899999999999888876 67889999998 467999999999999999999998888761
Q ss_pred -cc---------------cccEEEEEEEecCCCCC-CCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 251 -AH---------------SARVKGIVVLTKNDGGS-TAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 251 -~h---------------~~~v~~~~~~~~~~~~~-~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
+| ...|++++|+|++.... -..++.+|++++.||.|++|+++++
T Consensus 336 ~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 336 IEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 35 89999999999971000 0001129999999999999999875
No 45
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.9e-40 Score=284.93 Aligned_cols=293 Identities=13% Similarity=0.071 Sum_probs=248.4
Q ss_pred eEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCe------eeeEeccCCCCCeEEEEEeCC----CCCCCCc
Q 019326 32 LTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSS------SLGAIHHHESSSVTSLAFYTP----QNLSVPR 101 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~v~~l~~~~~----~~~~~~~ 101 (343)
......+.+|.++|++++|++++|++|+.||.|++||+.+++ .+..+..| ...|.+++|+|+ + ...+
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~g--~~~~ 82 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVH-KSGLHHVDVLQAIERDA--FELC 82 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECC-TTCEEEEEEEEEEETTT--EEEE
T ss_pred hhhhhhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecC-CCcEEEEEEecccccCC--cccc
Confidence 455667789999999999999999999999999999999987 78888888 899999999998 3 0003
Q ss_pred eEEEeeCCCeEEEEECCCcce-----eeeeeec-----cccEEEEEEe----cCCCE-EEEEeCCCeEEEEEccC-----
Q 019326 102 NLFSTSADGFVSIFDADPFVL-----LTSVKVH-----KKGVNDLAVH----HSGKL-ALTVGRDDCLAMVNLVR----- 161 (343)
Q Consensus 102 ~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~-----~~~v~~i~~~----~~~~~-l~~~~~d~~i~~wd~~~----- 161 (343)
+|++++.||.|++||+.+++. ...+..| ...|.+++|+ |++++ |++++.||.|++||+++
T Consensus 83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 162 (397)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccc
Confidence 899999999999999988877 8888888 5899999999 99999 99999999999999998
Q ss_pred -CceeE-----EEE--------cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecC-------CcceEEeee
Q 019326 162 -GRRSF-----YHK--------IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG-------KKRILCAAP 219 (343)
Q Consensus 162 -~~~~~-----~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~-------~~~i~~~~~ 219 (343)
++.+. ... +...+.+++|+|++ .++++ .++.|++||+++++.+..+.. ...+.+++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEE
Confidence 55443 333 46789999999999 88888 899999999999999888875 889999999
Q ss_pred c-CCCeEEEEeCC---CcEEEEECCCCceeEEeccc-------------ccccEEEEEEEecCCCCCCCCCCeEEEEEcC
Q 019326 220 G-ENGVLFTGGED---RSITAWDTNSGKVAYCIEDA-------------HSARVKGIVVLTKNDGGSTAENPYLVASASS 282 (343)
Q Consensus 220 ~-~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 282 (343)
+ ++.+|++++.| |.|++||+++++.+..+. + |...|.+++|+|++. +|++++.
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------~l~~~~~ 311 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS-VPTHSSQASLGEFAHSSWVMSLSFNDSGE---------TLCSAGW 311 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC-BC--------CCBSBSSCEEEEEECSSSS---------EEEEEET
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCcccceec-cCcccccccccccccCCcEEEEEECCCCC---------EEEEEeC
Confidence 8 46799999999 999999999999999998 7 999999999999887 9999999
Q ss_pred CCcEEEEeccCccccCCCccc--cccc---------------ccceeEEEcCCCC----------ceeccccCCCCCCCc
Q 019326 283 DGVICVWDVRMAIKEKPLPLA--EAKT---------------NSRLTCLAGSSTK----------SFKRPQIGDSAPKGE 335 (343)
Q Consensus 283 dg~i~vwd~~~~~~~~~~~~~--~~~~---------------~~~i~~~~~s~~~----------~~~~~~~~~~~~~~~ 335 (343)
||.|++||++++......... ...+ ...|.+++|++++ .+++.+..++.++.+
T Consensus 312 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw 391 (397)
T 1sq9_A 312 DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 391 (397)
T ss_dssp TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEE
Confidence 999999999987533222200 0022 6789999999998 799999999888776
Q ss_pred ccc
Q 019326 336 EKA 338 (343)
Q Consensus 336 ~~~ 338 (343)
+..
T Consensus 392 ~~~ 394 (397)
T 1sq9_A 392 REA 394 (397)
T ss_dssp EEE
T ss_pred EcC
Confidence 654
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.1e-40 Score=304.18 Aligned_cols=288 Identities=18% Similarity=0.196 Sum_probs=239.5
Q ss_pred EEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCC-----eeeeEeccCCCCCeEEEEEeCCCCCCCCceEE
Q 019326 33 TQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTS-----SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLF 104 (343)
Q Consensus 33 ~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~ 104 (343)
.....+++|.+.|++++|+ +++|+||+.|++|++|++.+. .....+.+| ...|.+++|+|++ ++|+
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h-~~~v~~v~~s~~g-----~~l~ 446 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH-SHFVEDVVLSSDG-----QFAL 446 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECC-SSCEEEEEECTTS-----SEEE
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCC-CCcEEEEEECCCC-----CEEE
Confidence 3445678999999999998 478999999999999999763 345678888 9999999999999 8999
Q ss_pred EeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE----EcCCcceEEEEe
Q 019326 105 STSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH----KIGKEASLIKFD 180 (343)
Q Consensus 105 s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~----~~~~~~~~~~~~ 180 (343)
+|+.||+|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+......... .+...+.+++|+
T Consensus 447 sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 447 SGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEEC
T ss_pred EEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999998665433322 234568999999
Q ss_pred CCC--CEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEeccccccc
Q 019326 181 GSG--EKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSAR 255 (343)
Q Consensus 181 ~~~--~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~ 255 (343)
|++ ..++++ .|+.|++||+++++....+. |...|.++++++ +++|++|+.||.|++||+++++.+..+. +...
T Consensus 527 ~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~--~~~~ 604 (694)
T 3dm0_A 527 PNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE--ANSV 604 (694)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB--CSSC
T ss_pred CCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec--CCCc
Confidence 987 567777 89999999999999888887 888999999994 6799999999999999999999888877 5678
Q ss_pred EEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccc---------------ccccccceeEEEcCCCC
Q 019326 256 VKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLA---------------EAKTNSRLTCLAGSSTK 320 (343)
Q Consensus 256 v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---------------~~~~~~~i~~~~~s~~~ 320 (343)
|.+++|+|++. +|+++ .|+.|++||++++......... .......+++++|+|++
T Consensus 605 v~~~~~sp~~~---------~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg 674 (694)
T 3dm0_A 605 IHALCFSPNRY---------WLCAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADG 674 (694)
T ss_dssp EEEEEECSSSS---------EEEEE-ETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTS
T ss_pred EEEEEEcCCCc---------EEEEE-cCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCC
Confidence 99999999875 66555 5677999999987432211100 00011136889999999
Q ss_pred ceeccccCCCCCCCcccc
Q 019326 321 SFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~ 338 (343)
++++.+..|+.++.++..
T Consensus 675 ~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 675 STLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp SEEEEEETTSEEEEEEC-
T ss_pred CEEEEEcCCCeEEEEecc
Confidence 999999999988877654
No 47
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.6e-40 Score=319.10 Aligned_cols=311 Identities=17% Similarity=0.208 Sum_probs=270.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.||.|++||+.+ ...+..+.+|...|++++|+ +++|++++.||.|++||+.+++.+..+.
T Consensus 629 ~l~s~~~d~~i~vw~~~~------------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 696 (1249)
T 3sfz_A 629 RIASCGADKTLQVFKAET------------GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD 696 (1249)
T ss_dssp EEEEEETTSCEEEEETTT------------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCC------------CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 478999999999999987 35667788999999999998 8899999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
.| ...|.+++|+|+++ ..++++|+.|+.|++||+.+++++..+.+|...|.+++|+|+++++++++.||.|++||+
T Consensus 697 ~~-~~~v~~~~~~~~~~---~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~ 772 (1249)
T 3sfz_A 697 EH-SEQVNCCHFTNKSN---HLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDV 772 (1249)
T ss_dssp CC-SSCEEEEEECSSSS---CCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEG
T ss_pred CC-CCcEEEEEEecCCC---ceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeC
Confidence 99 99999999999542 268999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeEEEEcC--------------CcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec--CCcceEEeeec-CC
Q 019326 160 VRGRRSFYHKIG--------------KEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD--GKKRILCAAPG-EN 222 (343)
Q Consensus 160 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~-~~ 222 (343)
++++........ ..+.+++|+|++..++++.++.+.+||+.++.....+. |...+.+++|+ ++
T Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~ 852 (1249)
T 3sfz_A 773 RSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD 852 (1249)
T ss_dssp GGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST
T ss_pred CCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC
Confidence 998766555432 26778999999999999999999999999998887775 78899999999 46
Q ss_pred CeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCc-
Q 019326 223 GVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLP- 301 (343)
Q Consensus 223 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~- 301 (343)
.++++++.||.|++||+.++..+..+. +|...|.+++|+|++. +|++++.||.|++|++.+........
T Consensus 853 ~~l~~~~~dg~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~---------~l~s~s~dg~v~vw~~~~~~~~~~~~~ 922 (1249)
T 3sfz_A 853 HLAVIALSQYCVELWNIDSRLKVADCR-GHLSWVHGVMFSPDGS---------SFLTASDDQTIRVWETKKVCKNSAIVL 922 (1249)
T ss_dssp TEEEEECSSSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSS---------EEEEEETTSCEEEEEHHHHHSCCSSSE
T ss_pred CEEEEEeCCCeEEEEEcCCCceeeecC-CCccceEEEEECCCCC---------EEEEEeCCCeEEEEEccccceeeeecc
Confidence 799999999999999999999999999 9999999999999887 99999999999999987532111100
Q ss_pred --------------------------------ccccccccceeEEEcCCCCceeccccCCCCCCCcccc
Q 019326 302 --------------------------------LAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 302 --------------------------------~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
.........+.+++++|++.+++.+..++.+..++..
T Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~ 991 (1249)
T 3sfz_A 923 KQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELP 991 (1249)
T ss_dssp EEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETT
T ss_pred cceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcC
Confidence 0011224569999999999999999999877665543
No 48
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-39 Score=280.22 Aligned_cols=266 Identities=16% Similarity=0.232 Sum_probs=228.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.+++++.|+.|++|++.. +. ...... ..|...|++++|+ +++|++|+.||.|++||+.+++.+..+.
T Consensus 105 ~l~~~~~d~~v~lw~~~~-------~~---~~~~~~-~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 173 (401)
T 4aez_A 105 NVVAVALERNVYVWNADS-------GS---VSALAE-TDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA 173 (401)
T ss_dssp SEEEEEETTEEEEEETTT-------CC---EEEEEE-CCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CEEEEECCCeEEEeeCCC-------Cc---EeEeee-cCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec
Confidence 478999999999999987 22 112222 2389999999998 8899999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC-CcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD-PFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
.| ...|.+++|++ +.|++|+.||.|++||++ ....+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 174 ~~-~~~v~~~~~~~-------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 245 (401)
T 4aez_A 174 GH-QARVGCLSWNR-------HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWD 245 (401)
T ss_dssp CC-SSCEEEEEEET-------TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CC-CCceEEEEECC-------CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEcc
Confidence 99 99999999953 589999999999999998 5667888899999999999999999999999999999999
Q ss_pred ccCCceeEEE-EcCCcceEEEEeCCCCEEEE-Ee---CCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEE--EeC
Q 019326 159 LVRGRRSFYH-KIGKEASLIKFDGSGEKFFM-VT---EEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFT--GGE 230 (343)
Q Consensus 159 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~---~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~--~~~ 230 (343)
+++++..... .+...+.+++|+|++..+++ +. ++.+++||+.+++.+..+.+...+.+++|++ +.++++ |+.
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 246 ARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp TTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTT
T ss_pred CCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecC
Confidence 9998877655 45678999999997765544 44 9999999999999999999999999999994 567777 558
Q ss_pred CCcEEEEECCCCceeE--EecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc
Q 019326 231 DRSITAWDTNSGKVAY--CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK 296 (343)
Q Consensus 231 dg~i~i~d~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 296 (343)
||.|++||+.+++... .+. +|...|.+++|+|++. +|++++.||.|++|++.++..
T Consensus 326 dg~i~v~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~---------~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 326 DNNLSIWSYSSSGLTKQVDIP-AHDTRVLYSALSPDGR---------ILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp TCEEEEEEEETTEEEEEEEEE-CCSSCCCEEEECTTSS---------EEEEECTTSEEEEEECCC---
T ss_pred CCcEEEEecCCccceeEEEec-CCCCCEEEEEECCCCC---------EEEEEeCCCcEEEEECCCCcc
Confidence 9999999999865444 456 8999999999999887 999999999999999998753
No 49
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2e-39 Score=267.60 Aligned_cols=243 Identities=16% Similarity=0.224 Sum_probs=206.4
Q ss_pred EEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCC--CeeeeEeccCCCCCeEEEEEeCC--CCCCCCceEEEeeCC
Q 019326 36 FSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLST--SSSLGAIHHHESSSVTSLAFYTP--QNLSVPRNLFSTSAD 109 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~v~~l~~~~~--~~~~~~~~l~s~~~d 109 (343)
..+.+|.+.|++++|+ +++|++|+.|++|++||+.+ .+.+..+.+| ..+|.+++|+++ + ++|++|+.|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH-~~~V~~v~~s~~~~g-----~~l~s~s~D 76 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFG-----TILASCSYD 76 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCC-SSCEEEEEECCGGGC-----SEEEEEETT
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccc-cCCeEEEEecCCCcC-----CEEEEEcCC
Confidence 3567899999999999 89999999999999999974 4678889999 999999999864 5 699999999
Q ss_pred CeEEEEECCCcc--eeeeeeeccccEEEEEEecC--CCEEEEEeCCCeEEEEEccCCce---eEEEEcCCcceEEEEeCC
Q 019326 110 GFVSIFDADPFV--LLTSVKVHKKGVNDLAVHHS--GKLALTVGRDDCLAMVNLVRGRR---SFYHKIGKEASLIKFDGS 182 (343)
Q Consensus 110 g~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~--~~~l~~~~~d~~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~~ 182 (343)
++|++||+++++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++.. .....+...+.+++|+|+
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 999999998764 56677889999999999997 88999999999999999987642 233445678999999997
Q ss_pred -------------CCEEEEE-eCCcEEEEEcccce----eEEEec-CCcceEEeeecCC----CeEEEEeCCCcEEEEEC
Q 019326 183 -------------GEKFFMV-TEEKVGIHQAEDAK----LLCELD-GKKRILCAAPGEN----GVLFTGGEDRSITAWDT 239 (343)
Q Consensus 183 -------------~~~~~~~-~~~~i~~~d~~~~~----~~~~~~-~~~~i~~~~~~~~----~~l~~~~~dg~i~i~d~ 239 (343)
+++++++ .|+.|++||+++++ ....+. |...|.+++|++. .+|++++.|++|++||+
T Consensus 157 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp C------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 4688888 89999999998765 455565 8889999999964 68999999999999999
Q ss_pred CCCc---eeEEec-ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 240 NSGK---VAYCIE-DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 240 ~~~~---~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
++.. ....+. ..|...|.+++|+|++. +|++++.||.|++|+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---------~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 237 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGN---------VLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECSSSC---------CEEEEETTSCEEEEEECT
T ss_pred CCCCCccceeeeecccCCCcEEEEEECCCCC---------EEEEEcCCCcEEEEEECC
Confidence 8753 122331 26888999999999987 999999999999999874
No 50
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-39 Score=274.57 Aligned_cols=286 Identities=13% Similarity=0.106 Sum_probs=249.7
Q ss_pred eeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC
Q 019326 31 TLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA 108 (343)
Q Consensus 31 ~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~ 108 (343)
.......+.+|.++|++++|+ +++|++++.||.|++||+.+++.+..+..| ...|.+++|+|++ ++|++++.
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~-----~~l~s~~~ 94 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGH-TGTIWSIDVDCFT-----KYCVTGSA 94 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTS-----SEEEEEET
T ss_pred cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhc-CCcEEEEEEcCCC-----CEEEEEeC
Confidence 345567788999999999998 889999999999999999999999999999 9999999999998 89999999
Q ss_pred CCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC-----CeEEEEEccCCceeE------------EEEcC
Q 019326 109 DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD-----DCLAMVNLVRGRRSF------------YHKIG 171 (343)
Q Consensus 109 dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~------------~~~~~ 171 (343)
||.|++||+.+++.+..+. +...|.+++|+|+++++++++.+ +.|++||+....... ...+.
T Consensus 95 dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (369)
T 3zwl_B 95 DYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE 173 (369)
T ss_dssp TTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT
T ss_pred CCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc
Confidence 9999999999999998888 88899999999999999999999 999999998764221 11122
Q ss_pred C--cceEEEEeCCCCEEEEE-eCCcEEEEEccc-ceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCcee
Q 019326 172 K--EASLIKFDGSGEKFFMV-TEEKVGIHQAED-AKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVA 245 (343)
Q Consensus 172 ~--~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~-~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~ 245 (343)
. .+.+++|+|+++.++++ .++.|.+||+++ .+....+. |...+.+++|+ ++.+|++++.||.|++||+++++.+
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 174 GLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVL 253 (369)
T ss_dssp TCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCcee
Confidence 2 78999999999999999 899999999998 67777776 78899999998 4679999999999999999999999
Q ss_pred EEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCC--------------cEEEEeccCccccCCCcccccccccce
Q 019326 246 YCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG--------------VICVWDVRMAIKEKPLPLAEAKTNSRL 311 (343)
Q Consensus 246 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg--------------~i~vwd~~~~~~~~~~~~~~~~~~~~i 311 (343)
..+. +...+..++|+|++. ++++++.++ .+++||+.++..... ...+...|
T Consensus 254 ~~~~--~~~~~~~~~~~~~~~---------~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~----~~~~~~~v 318 (369)
T 3zwl_B 254 KKYE--TDCPLNTAVITPLKE---------FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR----VQGHFGPL 318 (369)
T ss_dssp EEEE--CSSCEEEEEECSSSS---------EEEEEECCC-------------CEEEEEETTTCCEEEE----EECCSSCE
T ss_pred eeec--CCCCceeEEecCCCc---------eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh----eecccCcE
Confidence 8887 888999999999988 999999988 899999988642221 12345679
Q ss_pred eEEEcCCCCceeccccCCCCCCCcccc
Q 019326 312 TCLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 312 ~~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
.+++|+|++.+++.+..|+.++.++..
T Consensus 319 ~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 319 NTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 999999999999999999987766543
No 51
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.7e-39 Score=278.29 Aligned_cols=264 Identities=17% Similarity=0.226 Sum_probs=227.7
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
+++.+.|++|+|||..+ + +......+.+|...|++|+|+ +++|++|+.||.|++||+.+++.+..+.+
T Consensus 118 ~lAvgld~tV~lWd~~t-------g---~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~ 187 (420)
T 4gga_A 118 VLAVALDNSVYLWSASS-------G---DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS 187 (420)
T ss_dssp EEEEEETTEEEEEETTT-------C---CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEEeCCEEEEEECCC-------C---CEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC
Confidence 34445699999999987 2 234455667889999999999 89999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC-cceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP-FVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
| ...+.++.+++ ..|++|+.|+.+++||... ...+..+.+|...+..+.++|+++++++++.|+.+++|+.
T Consensus 188 h-~~~v~~~s~~~-------~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 188 H-SARVGSLSWNS-------YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 259 (420)
T ss_dssp C-SSCEEEEEEET-------TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred C-CCceEEEeeCC-------CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEee
Confidence 9 89999998864 5899999999999999875 4466788899999999999999999999999999999999
Q ss_pred cCCcee-----EEEEcCCcceEEEEeCCCCEE-EEE---eCCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEe
Q 019326 160 VRGRRS-----FYHKIGKEASLIKFDGSGEKF-FMV---TEEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGG 229 (343)
Q Consensus 160 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~ 229 (343)
.+++.. ....+...+..++|+|.+..+ +++ .|+.|++||+.+++....+.+...+.++.++ +++.+++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 260 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH 339 (420)
T ss_dssp SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEE
Confidence 877532 233455789999999976644 443 5899999999999999999988899999988 456666544
Q ss_pred --CCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 230 --EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 230 --~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.|+.|++||+.+++++.++. +|...|++++|+|++. +|+||+.|++|+|||+...
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~-gH~~~V~~l~~spdg~---------~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELK-GHTSRVLSLTMSPDGA---------TVASAAADETLRLWRCFEL 396 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSS---------CEEEEETTTEEEEECCSCS
T ss_pred ecCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCC---------EEEEEecCCeEEEEECCCC
Confidence 79999999999999999999 9999999999999887 9999999999999999865
No 52
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.1e-40 Score=280.34 Aligned_cols=266 Identities=16% Similarity=0.187 Sum_probs=223.9
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec------CceEEEeeCCCeEEEEEcCCCeeee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS------GTAAASGGTDDTIHLYDLSTSSSLG 76 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~------~~~l~s~~~dg~i~iwd~~~~~~~~ 76 (343)
+++++.++.|++|++.. +.............|...|++++|+ +.+|++|+.||.|++||+.+++.+.
T Consensus 37 ~~~~~~~~~v~vw~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~ 109 (366)
T 3k26_A 37 VFATVGSNRVTLYECHS-------QGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIK 109 (366)
T ss_dssp EEEEEETTEEEEEEECG-------GGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEE
T ss_pred EEEECCCCEEEEEEcCC-------CcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEee
Confidence 77888888999999986 3333222223333478899999998 2489999999999999999999999
Q ss_pred EeccCCCCCeEEEEEeC-CCCCCCCceEEEeeCCCeEEEEECCCcceeeee---eeccccEEEEEEecCCCEEEEEeCCC
Q 019326 77 AIHHHESSSVTSLAFYT-PQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV---KVHKKGVNDLAVHHSGKLALTVGRDD 152 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~i~~~~~~~~l~~~~~d~ 152 (343)
.+..| ...|.+++|+| ++ ++|++++.||.|++||+++++.+..+ ..|...|.+++|+|++++|++++.||
T Consensus 110 ~~~~~-~~~i~~~~~~~~~~-----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 183 (366)
T 3k26_A 110 HYVGH-GNAINELKFHPRDP-----NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH 183 (366)
T ss_dssp EEESC-CSCEEEEEECSSCT-----TEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eecCC-CCcEEEEEECCCCC-----CEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCC
Confidence 99989 99999999999 66 79999999999999999999988888 67999999999999999999999999
Q ss_pred eEEEEEccCCceeEEEE-----------------------------cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc
Q 019326 153 CLAMVNLVRGRRSFYHK-----------------------------IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA 202 (343)
Q Consensus 153 ~i~~wd~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~ 202 (343)
.|++||+++++...... +...+.+++|+ +++++++ .++.|++||+.+.
T Consensus 184 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~ 261 (366)
T 3k26_A 184 SLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKM 261 (366)
T ss_dssp CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESST
T ss_pred CEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCc
Confidence 99999998765432111 56778999998 6788888 8999999999876
Q ss_pred ee--------------EEEec-CCcceEEeeec-C--CCeEEEEeCCCcEEEEECCCCce----eEEecccc--cccEEE
Q 019326 203 KL--------------LCELD-GKKRILCAAPG-E--NGVLFTGGEDRSITAWDTNSGKV----AYCIEDAH--SARVKG 258 (343)
Q Consensus 203 ~~--------------~~~~~-~~~~i~~~~~~-~--~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~h--~~~v~~ 258 (343)
.. +..+. |...+.+++|+ + +++|++|+.||.|++||+.+++. ...+. +| ...|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~ 340 (366)
T 3k26_A 262 EDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLT-HHKCGAAIRQ 340 (366)
T ss_dssp TCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEEC-CTTCCSCEEE
T ss_pred cccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEc-ccccCCceEE
Confidence 43 44444 67788889888 4 68999999999999999998763 34666 66 799999
Q ss_pred EEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 259 IVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
++|+|++. +|++++.||.|++||+.+
T Consensus 341 ~~~s~~~~---------~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 341 TSFSRDSS---------ILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEECTTSS---------EEEEEETTSEEEEEEC--
T ss_pred EEeCCCCC---------eEEEEeCCCEEEEEEecC
Confidence 99999887 999999999999999863
No 53
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-39 Score=272.13 Aligned_cols=265 Identities=13% Similarity=0.136 Sum_probs=237.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.||.|++||+.. .+.+..+.+|...|++++|+ +++|++++.||.|++||+.+++.+..+.
T Consensus 46 ~l~~~~~dg~i~vwd~~~------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 113 (369)
T 3zwl_B 46 LLFSCSKDSSASVWYSLN------------GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK 113 (369)
T ss_dssp EEEEEESSSCEEEEETTT------------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred EEEEEeCCCEEEEEeCCC------------chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 488999999999999876 35567788999999999999 8899999999999999999999998888
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCC-----CeEEEEECCCcc-----------eeeeeeeccc--cEEEEEEecC
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSAD-----GFVSIFDADPFV-----------LLTSVKVHKK--GVNDLAVHHS 141 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~-----------~~~~~~~~~~--~v~~i~~~~~ 141 (343)
+ ...|.+++|+|++ +++++++.+ +.|++||+.... ....+..|.. .+.+++|+|+
T Consensus 114 -~-~~~v~~~~~~~~~-----~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (369)
T 3zwl_B 114 -S-PVPVKRVEFSPCG-----NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK 186 (369)
T ss_dssp -C-SSCEEEEEECTTS-----SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG
T ss_pred -c-CCCeEEEEEccCC-----CEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC
Confidence 5 6899999999999 899999998 999999986543 3444555666 8999999999
Q ss_pred CCEEEEEeCCCeEEEEEccC-CceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEee
Q 019326 142 GKLALTVGRDDCLAMVNLVR-GRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAA 218 (343)
Q Consensus 142 ~~~l~~~~~d~~i~~wd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~ 218 (343)
+++|++++.||.|++||+++ .+...... +...+.+++|+|++++++++ .++.|++||+++++....+.+...+.+++
T Consensus 187 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 266 (369)
T 3zwl_B 187 GKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAV 266 (369)
T ss_dssp GCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEE
Confidence 99999999999999999998 55555444 46789999999999999999 89999999999999999999999999999
Q ss_pred ec-CCCeEEEEeCCC--------------cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC
Q 019326 219 PG-ENGVLFTGGEDR--------------SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD 283 (343)
Q Consensus 219 ~~-~~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d 283 (343)
++ ++.++++++.++ .+++||..+++.+..+. +|...|++++|+|++. +|++++.|
T Consensus 267 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~---------~l~s~~~d 336 (369)
T 3zwl_B 267 ITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ-GHFGPLNTVAISPQGT---------SYASGGED 336 (369)
T ss_dssp ECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSS---------EEEEEETT
T ss_pred ecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee-cccCcEEEEEECCCCC---------EEEEEcCC
Confidence 98 467888988888 89999999999999998 9999999999999887 99999999
Q ss_pred CcEEEEeccCcc
Q 019326 284 GVICVWDVRMAI 295 (343)
Q Consensus 284 g~i~vwd~~~~~ 295 (343)
|.|++|+++.+.
T Consensus 337 g~v~iw~~~~~~ 348 (369)
T 3zwl_B 337 GFIRLHHFEKSY 348 (369)
T ss_dssp SEEEEEEECHHH
T ss_pred CeEEEEECcccc
Confidence 999999999764
No 54
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=9.8e-40 Score=283.86 Aligned_cols=257 Identities=17% Similarity=0.255 Sum_probs=225.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHH 81 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 81 (343)
.|++|+.||.|++||+.+ .+....+.+|.++|++++|++++|++|+.||.|++||+.+++.+..+..|
T Consensus 145 ~l~~g~~dg~i~iwd~~~------------~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 212 (435)
T 1p22_A 145 KIVSGLRDNTIKIWDKNT------------LECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHH 212 (435)
T ss_dssp EEEEEESSSCEEEEESSS------------CCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCC
T ss_pred EEEEEeCCCeEEEEeCCC------------CeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCC
Confidence 478999999999999886 34567788999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCccee---eeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 82 ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL---TSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 82 ~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
...|.+++|++ ..+++|+.||.|++||+.+++.. ..+.+|...|.+++| +++++++++.||.|++||
T Consensus 213 -~~~v~~l~~~~-------~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd 282 (435)
T 1p22_A 213 -CEAVLHLRFNN-------GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWN 282 (435)
T ss_dssp -CSCEEEEECCT-------TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred -CCcEEEEEEcC-------CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEE
Confidence 99999999973 48999999999999999887665 667789999999999 577999999999999999
Q ss_pred ccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEE
Q 019326 159 LVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSIT 235 (343)
Q Consensus 159 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~ 235 (343)
+++++.+.... +...+.++.+ ++..++++ .|+.|++||+++++.+..+. |...+.++.+ +++++++|+.||.|+
T Consensus 283 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~sg~~dg~i~ 359 (435)
T 1p22_A 283 TSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIK 359 (435)
T ss_dssp TTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEE
T ss_pred CCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe-cCCEEEEEeCCCcEE
Confidence 99998877665 4567888888 46788888 89999999999999998888 8889999999 788999999999999
Q ss_pred EEECCCCc---------eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 236 AWDTNSGK---------VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 236 i~d~~~~~---------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+||+.+++ .+..+. +|...|.+++| ++. +|++++.||.|++||+.+..
T Consensus 360 vwd~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~--~~~---------~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 360 VWDLVAALDPRAPAGTLCLRTLV-EHSGRVFRLQF--DEF---------QIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp EEEHHHHTSTTSCTTTTEEEEEC-CCSSCCCCEEE--CSS---------CEEECCSSSEEEEEC-----
T ss_pred EEECCCCCCccccccchheeecc-CCCCCeEEEEe--CCC---------EEEEEeCCCEEEEEECCCCC
Confidence 99997665 788888 99999999999 444 89999999999999998764
No 55
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4e-39 Score=282.37 Aligned_cols=279 Identities=19% Similarity=0.201 Sum_probs=239.6
Q ss_pred EeEEecCCCCC-eEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeE
Q 019326 34 QLFSYPAHLSP-ITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFV 112 (343)
Q Consensus 34 ~~~~~~~h~~~-v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 112 (343)
....+.+|... +.++.+++++|++|+.||.|++||+.+++.+..+.+| ...|.+++|+|++ .|++|+.||+|
T Consensus 113 ~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h-~~~V~~l~~~~~~------~l~s~s~dg~i 185 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGH-DGGVWALKYAHGG------ILVSGSTDRTV 185 (464)
T ss_dssp EEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECSTT------EEEEEETTSCE
T ss_pred ceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCC-CcCEEEEEEcCCC------EEEEEeCCCCE
Confidence 44577899888 4788888999999999999999999999999999999 9999999999876 89999999999
Q ss_pred EEEECCCcceeeeeeeccccEEEEEEe--cCCCEEEEEeCCCeEEEEEccCCceeEE----------------------E
Q 019326 113 SIFDADPFVLLTSVKVHKKGVNDLAVH--HSGKLALTVGRDDCLAMVNLVRGRRSFY----------------------H 168 (343)
Q Consensus 113 ~iwd~~~~~~~~~~~~~~~~v~~i~~~--~~~~~l~~~~~d~~i~~wd~~~~~~~~~----------------------~ 168 (343)
++||+++++.+..+.+|...|.+++|+ +++.++++++.|+.|++||++++..... .
T Consensus 186 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 186 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred EEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 999999999999999999999999998 5778999999999999999988764321 1
Q ss_pred EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCcee
Q 019326 169 KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVA 245 (343)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~ 245 (343)
...+.....++++++++++++ .|+.|++||+++++.+..+. |...+.++++++ ++++++|+.||.|++||+++++.+
T Consensus 266 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 266 LRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred ccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 122333445567889999999 89999999999999998887 788999999984 679999999999999999999999
Q ss_pred EEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceecc
Q 019326 246 YCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRP 325 (343)
Q Consensus 246 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~ 325 (343)
..+. +|...|.++.+++ . +|++++.||.|++||++++. ..........+..+++++++.+++.
T Consensus 346 ~~~~-~h~~~v~~~~~~~--~---------~l~s~s~dg~v~vwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~ 408 (464)
T 3v7d_B 346 YTLQ-GHTALVGLLRLSD--K---------FLVSAAADGSIRGWDANDYS-----RKFSYHHTNLSAITTFYVSDNILVS 408 (464)
T ss_dssp EEEC-CCSSCEEEEEECS--S---------EEEEEETTSEEEEEETTTCC-----EEEEEECTTCCCEEEEEECSSEEEE
T ss_pred EEEe-CCCCcEEEEEEcC--C---------EEEEEeCCCcEEEEECCCCc-----eeeeecCCCCccEEEEEeCCCEEEE
Confidence 9999 9999999999974 3 99999999999999999753 2333445566888899999998888
Q ss_pred ccCCCCCCCccc
Q 019326 326 QIGDSAPKGEEK 337 (343)
Q Consensus 326 ~~~~~~~~~~~~ 337 (343)
+. ++.++.++.
T Consensus 409 ~~-dg~i~iwd~ 419 (464)
T 3v7d_B 409 GS-ENQFNIYNL 419 (464)
T ss_dssp EE-TTEEEEEET
T ss_pred ec-CCeEEEEEC
Confidence 87 666655544
No 56
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.9e-39 Score=275.55 Aligned_cols=263 Identities=14% Similarity=0.104 Sum_probs=221.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
.|++|+.||.|++||+... . ........+|...|.+++|+ +++|++++.|+.|++||+.+ +.+..+
T Consensus 88 ~l~s~~~dg~i~iwd~~~~-------~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~ 156 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQ-------N---KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVF 156 (383)
T ss_dssp EEEEEEBTSCEEEEETTST-------T---CEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEE
T ss_pred EEEEEcCCCeEEEEeCCCc-------c---cceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEE
Confidence 5899999999999999862 1 22333445799999999998 47999999999999999985 555555
Q ss_pred ccCC--CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCC-EEEEEeCCCeEE
Q 019326 79 HHHE--SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGK-LALTVGRDDCLA 155 (343)
Q Consensus 79 ~~~~--~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~~~d~~i~ 155 (343)
..+. ...|.+++|+|++ ++|++|+.|+.|++||+ +++.+..+..|...|.+++|+|+++ ++++++.|+.|+
T Consensus 157 ~~~~~~~~~v~~~~~~~~~-----~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 230 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSR-----QMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVK 230 (383)
T ss_dssp ECCCCSSCCEEEEEEETTT-----TEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred eccCCCCCCeEEEEECCCC-----CEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEE
Confidence 5441 4789999999998 89999999999999999 5678899999999999999999998 999999999999
Q ss_pred EEEccC----CceeEEEEcCCcceEEEEeC-CCCEEEEE-eCCcEEEEEcccceeEEEec-C-----------------C
Q 019326 156 MVNLVR----GRRSFYHKIGKEASLIKFDG-SGEKFFMV-TEEKVGIHQAEDAKLLCELD-G-----------------K 211 (343)
Q Consensus 156 ~wd~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~-----------------~ 211 (343)
+||+++ +.......+...+.+++|+| ++.+++++ .|+.|++||+++++....+. + .
T Consensus 231 iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 310 (383)
T 3ei3_B 231 LWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPM 310 (383)
T ss_dssp EEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSS
T ss_pred EEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCC
Confidence 999998 66666677889999999999 99999999 89999999999887655554 2 1
Q ss_pred cceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEeccc--ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 212 KRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDA--HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 212 ~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
..+..+++++++.+ +|+.||.|++||+.+++.+..+. + |...+..++|+|++. +|++++ ||.|++|
T Consensus 311 ~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~-~~~~~~~~~~~~~s~~g~---------~l~s~s-d~~i~iw 378 (383)
T 3ei3_B 311 YDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLR-DPNAAGIISLNKFSPTGD---------VLASGM-GFNILIW 378 (383)
T ss_dssp SSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEEC-BTTBCSCCCEEEECTTSS---------EEEEEE-TTEEEEE
T ss_pred CCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeec-CCCCCceEEEEEEecCcc---------EEEEec-CCcEEEE
Confidence 34445666644333 78899999999999999999998 5 567788889999887 999997 9999999
Q ss_pred eccC
Q 019326 290 DVRM 293 (343)
Q Consensus 290 d~~~ 293 (343)
|+++
T Consensus 379 ~~~~ 382 (383)
T 3ei3_B 379 NRED 382 (383)
T ss_dssp ECC-
T ss_pred ecCC
Confidence 9975
No 57
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-38 Score=265.15 Aligned_cols=258 Identities=16% Similarity=0.191 Sum_probs=226.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC---eeee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS---SSLG 76 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~---~~~~ 76 (343)
.|++|+.||.|++||+.. ......+..|...|.+++|+ +++|++++.||.|++|++... +.+.
T Consensus 31 ~l~s~~~dg~v~vw~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~ 98 (313)
T 3odt_A 31 KVASVSRDGTVRLWSKDD------------QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLY 98 (313)
T ss_dssp EEEEEETTSEEEEEEESS------------SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-C
T ss_pred EEEEEEcCCcEEEEECCC------------CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCccc
Confidence 589999999999999976 34556667899999999999 889999999999999998764 5677
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEec-CCCEEEEEeCCCeEE
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH-SGKLALTVGRDDCLA 155 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~d~~i~ 155 (343)
.+..| ...|.++.|. + +++++++.||.|++|| .++....+..|...+.+++|.| +++++++++.|+.|+
T Consensus 99 ~~~~~-~~~i~~~~~~--~-----~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~ 168 (313)
T 3odt_A 99 TLIGH-QGNVCSLSFQ--D-----GVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIK 168 (313)
T ss_dssp EECCC-SSCEEEEEEE--T-----TEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEE
T ss_pred chhhc-ccCEEEEEec--C-----CEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEE
Confidence 78888 8999999994 3 5899999999999999 6678888999999999999998 889999999999999
Q ss_pred EEEccCCceeEEEE--cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCC
Q 019326 156 MVNLVRGRRSFYHK--IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGED 231 (343)
Q Consensus 156 ~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d 231 (343)
+||.. +...... +...+.+++|+|++. ++++ .++.+++||+++++.+..+. |..++.+++|++++.+++++.|
T Consensus 169 i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d 245 (313)
T 3odt_A 169 LWQND--KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGED 245 (313)
T ss_dssp EEETT--EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETT
T ss_pred EEecC--ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecC
Confidence 99943 3333333 567899999999999 5555 99999999999999998887 8899999999977689999999
Q ss_pred CcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 232 RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 232 g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
|.|++||+++++.+..+. .|...|.+++|+|++. +++++.||.|++||++++.
T Consensus 246 g~v~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~----------~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVIT-LPAISIWSVDCMSNGD----------IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp SEEEEECTTTCCEEEEEE-CSSSCEEEEEECTTSC----------EEEEETTSCEEEEESCGGG
T ss_pred CEEEEEECCCCceeEEEe-ccCceEEEEEEccCCC----------EEEEeCCCcEEEEeCCCCc
Confidence 999999999999999998 8999999999999874 6679999999999999875
No 58
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.2e-39 Score=272.26 Aligned_cols=273 Identities=16% Similarity=0.153 Sum_probs=223.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEe-
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAI- 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~- 78 (343)
.|++|+.|+.|++||+.. + +......+.+|...|++++|+ +++|++++.||.|++||+.+++....+
T Consensus 22 ~l~~~~~d~~v~i~~~~~-------~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 91 (372)
T 1k8k_C 22 QIAICPNNHEVHIYEKSG-------N---KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLV 91 (372)
T ss_dssp EEEEECSSSEEEEEEEET-------T---EEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEEEEeCCCEEEEEeCCC-------C---cEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEE
Confidence 478899999999999987 1 234677788999999999999 889999999999999999988755444
Q ss_pred -ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcce---eee-eeeccccEEEEEEecCCCEEEEEeCCCe
Q 019326 79 -HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL---LTS-VKVHKKGVNDLAVHHSGKLALTVGRDDC 153 (343)
Q Consensus 79 -~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---~~~-~~~~~~~v~~i~~~~~~~~l~~~~~d~~ 153 (343)
..| ...|.+++|+|++ ++|++++.|+.|++||++..+. ... ...|...|.+++|+|++++|++++.||.
T Consensus 92 ~~~~-~~~v~~~~~~~~~-----~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 165 (372)
T 1k8k_C 92 ILRI-NRAARCVRWAPNE-----KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK 165 (372)
T ss_dssp CCCC-SSCEEEEEECTTS-----SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred eecC-CCceeEEEECCCC-----CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCC
Confidence 556 8899999999998 8999999999999999987653 223 3567889999999999999999999999
Q ss_pred EEEEEcc------------------CCceeEEE-EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCc
Q 019326 154 LAMVNLV------------------RGRRSFYH-KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKK 212 (343)
Q Consensus 154 i~~wd~~------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~ 212 (343)
|++||++ .++..... .+...+.+++|+|++++++++ .|+.|++||+++++.+..+. +..
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 245 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETL 245 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSC
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCC
Confidence 9999964 45555444 345779999999999999999 89999999999999988887 667
Q ss_pred ceEEeeecCCCeEEEEeCCCcEEEEECCC--Cc--------------------------------ee------EEecccc
Q 019326 213 RILCAAPGENGVLFTGGEDRSITAWDTNS--GK--------------------------------VA------YCIEDAH 252 (343)
Q Consensus 213 ~i~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~--------------------------------~~------~~~~~~h 252 (343)
++.+++|++++.+++++.|+.|++|++.+ ++ .. ..+..+|
T Consensus 246 ~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 325 (372)
T 1k8k_C 246 PLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLH 325 (372)
T ss_dssp CEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSS
T ss_pred CeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccc
Confidence 99999999554444444999999999987 42 00 2232389
Q ss_pred cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 253 SARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 253 ~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
..+|++++|++... .++.+|+|++.||.|++||++++.
T Consensus 326 ~~~v~~~~~~~~~g-----~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 326 KNSVSQISVLSGGK-----AKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp SSCEEEEEEEESTT-----TSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cCCcceeEEecCCC-----cceeeEEEecCCCceEEEEecChh
Confidence 99999999875531 000299999999999999998764
No 59
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-38 Score=264.23 Aligned_cols=279 Identities=14% Similarity=0.131 Sum_probs=236.1
Q ss_pred eEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC
Q 019326 32 LTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG 110 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg 110 (343)
.+....+.+|.++|++++|. +++|++|+.||.|++||+.+++....+..| ...|.+++|+|++ ++|++++.||
T Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~-----~~l~~~~~dg 81 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTG-QGFLNSVCYDSEK-----ELLLFGGKDT 81 (313)
T ss_dssp CEEEEEECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEEC-SSCEEEEEEETTT-----TEEEEEETTS
T ss_pred HHHHHHhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecC-CccEEEEEECCCC-----CEEEEecCCC
Confidence 56778889999999999998 889999999999999999999999999988 9999999999998 8999999999
Q ss_pred eEEEEECCCc---ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE-EcCCcceEEEEeC-CCCE
Q 019326 111 FVSIFDADPF---VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH-KIGKEASLIKFDG-SGEK 185 (343)
Q Consensus 111 ~i~iwd~~~~---~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~-~~~~ 185 (343)
.|++|++... +.+..+..|...|.+++| +++++++++.|+.|++|| .++..... .+...+..+.+.| ++..
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~ 157 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENK 157 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTE
T ss_pred eEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCE
Confidence 9999998543 567788899999999999 467999999999999999 44444433 4567888999988 8889
Q ss_pred EEEE-eCCcEEEEEcccceeEEEec--CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEE
Q 019326 186 FFMV-TEEKVGIHQAEDAKLLCELD--GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVL 262 (343)
Q Consensus 186 ~~~~-~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~ 262 (343)
++++ .++.+++||. .+....+. +...+.++++++++.+++++.||.|++||+++++.+..+. +|...|++++|+
T Consensus 158 l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~ 234 (313)
T 3odt_A 158 FLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYE-GHESFVYCIKLL 234 (313)
T ss_dssp EEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEEC
T ss_pred EEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhh-cCCceEEEEEEe
Confidence 9988 8999999994 44444444 8889999999976669999999999999999999999998 999999999999
Q ss_pred ecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCcccc
Q 019326 263 TKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 263 ~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
|++ .|++++.||.|++||++++...... ..+...|.++++++++.++ .+..++.++.++..
T Consensus 235 ~~~----------~l~~~~~dg~v~iwd~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~-~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 235 PNG----------DIVSCGEDRTVRIWSKENGSLKQVI----TLPAISIWSVDCMSNGDII-VGSSDNLVRIFSQE 295 (313)
T ss_dssp TTS----------CEEEEETTSEEEEECTTTCCEEEEE----ECSSSCEEEEEECTTSCEE-EEETTSCEEEEESC
T ss_pred cCC----------CEEEEecCCEEEEEECCCCceeEEE----eccCceEEEEEEccCCCEE-EEeCCCcEEEEeCC
Confidence 987 5889999999999999987422211 1234579999999999855 57778877666543
No 60
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.3e-39 Score=274.72 Aligned_cols=285 Identities=13% Similarity=0.077 Sum_probs=231.3
Q ss_pred eEEeEEecCCCCCeEEEEec--C-ceEEEeeCCCeEEEEEcCCCeeeeEec--cCCCCCeEEEEEeC-CCCCCCCceEEE
Q 019326 32 LTQLFSYPAHLSPITTVAVS--G-TAAASGGTDDTIHLYDLSTSSSLGAIH--HHESSSVTSLAFYT-PQNLSVPRNLFS 105 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~-~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~l~~~~-~~~~~~~~~l~s 105 (343)
......+.+|...|++++|+ + ++|++|+.||.|++||+.+++....+. +| ...|.+++|+| ++ ++|++
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~-----~~l~s 136 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGP-GDAITGMKFNQFNT-----NQLFV 136 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCST-TCBEEEEEEETTEE-----EEEEE
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCc-CCceeEEEeCCCCC-----CEEEE
Confidence 45566788999999999999 5 799999999999999999888777775 57 89999999999 55 79999
Q ss_pred eeCCCeEEEEECCCcceeeeeeecc---ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCC
Q 019326 106 TSADGFVSIFDADPFVLLTSVKVHK---KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGS 182 (343)
Q Consensus 106 ~~~dg~i~iwd~~~~~~~~~~~~~~---~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
++.|+.|++||+.+ +.+..+..+. ..|.+++|+|++++|++++.|+.|++||++.........+...+.+++|+|+
T Consensus 137 ~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 137 SSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp EETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSS
T ss_pred EeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCC
Confidence 99999999999986 5556665444 7899999999999999999999999999954333334446688999999999
Q ss_pred CC-EEEEE-eCCcEEEEEccc----ceeEEEecCCcceEEeeecC--CCeEEEEeCCCcEEEEECCCCceeEEeccccc-
Q 019326 183 GE-KFFMV-TEEKVGIHQAED----AKLLCELDGKKRILCAAPGE--NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHS- 253 (343)
Q Consensus 183 ~~-~~~~~-~~~~i~~~d~~~----~~~~~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~- 253 (343)
++ +++++ .|+.|++||+++ +..+..+.|...+.+++|++ +.+|++++.|+.|++||+++++.+..+. .|.
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~ 294 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII-IHPH 294 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE-ECCB
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc-cccc
Confidence 99 88888 899999999998 67788888999999999986 5799999999999999999988776665 442
Q ss_pred ------c----------cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcC
Q 019326 254 ------A----------RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGS 317 (343)
Q Consensus 254 ------~----------~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s 317 (343)
. .+..+++++++. + +++.||.|++||+.++..... +....+...+.+++|+
T Consensus 295 ~~~~~~~~~~~~~~p~~~~~~~~~s~dg~---------~--s~s~d~~i~iwd~~~~~~~~~--l~~~~~~~~~~~~~~s 361 (383)
T 3ei3_B 295 RQFQHLTPIKATWHPMYDLIVAGRYPDDQ---------L--LLNDKRTIDIYDANSGGLVHQ--LRDPNAAGIISLNKFS 361 (383)
T ss_dssp CCCTTSCCCCCEECSSSSEEEEECBCCTT---------T--CTTCCCCEEEEETTTCCEEEE--ECBTTBCSCCCEEEEC
T ss_pred cccccccceEEeccCCCCceEEEecCCcc---------c--ccCCCCeEEEEecCCCceeee--ecCCCCCceEEEEEEe
Confidence 2 333355555553 4 888999999999998753221 1112245668888999
Q ss_pred CCCceeccccCCCCCCCcccc
Q 019326 318 STKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~ 338 (343)
+++.+++.+. |+.++.++..
T Consensus 362 ~~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 362 PTGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp TTSSEEEEEE-TTEEEEEECC
T ss_pred cCccEEEEec-CCcEEEEecC
Confidence 9999999985 7777766543
No 61
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.7e-39 Score=274.40 Aligned_cols=284 Identities=11% Similarity=0.058 Sum_probs=239.0
Q ss_pred cCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe--eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 39 PAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS--SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 39 ~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
..|.++|++++|+ +++|++++.|+.|++||+.+++ .+..+..| ...|.+++|+|++ ++|++++.||.|++
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~-----~~l~~~~~dg~i~v 78 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEH-NGQVTGVDWAPDS-----NRIVTCGTDRNAYV 78 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECC-SSCEEEEEEETTT-----TEEEEEETTSCEEE
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCC-CCcccEEEEeCCC-----CEEEEEcCCCeEEE
Confidence 4589999999999 8899999999999999999987 88889888 8999999999998 89999999999999
Q ss_pred EECCCcceeeee--eeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCce---eEEE--EcCCcceEEEEeCCCCEEE
Q 019326 115 FDADPFVLLTSV--KVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR---SFYH--KIGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 115 wd~~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~ 187 (343)
||+.+++....+ ..|...|.+++|+|++++|++++.|+.|++||++.+.. .... .+...+.+++|+|++++++
T Consensus 79 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 158 (372)
T 1k8k_C 79 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA 158 (372)
T ss_dssp EEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred EECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEE
Confidence 999887654443 56889999999999999999999999999999998773 2222 2357799999999999999
Q ss_pred EE-eCCcEEEEEc------------------ccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeE
Q 019326 188 MV-TEEKVGIHQA------------------EDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAY 246 (343)
Q Consensus 188 ~~-~~~~i~~~d~------------------~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~ 246 (343)
++ .++.+++||+ ..++.+..+. |...+.+++|++ +++|++++.||.|++||+++++.+.
T Consensus 159 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 159 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred EEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 99 8999999995 4667777775 788999999984 5699999999999999999999999
Q ss_pred EecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC--ccc----------------------------
Q 019326 247 CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM--AIK---------------------------- 296 (343)
Q Consensus 247 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~--~~~---------------------------- 296 (343)
.+. .|..+|.+++|+|++. +|+++ .|+.|++|++++ +..
T Consensus 239 ~~~-~~~~~v~~~~~~~~~~---------~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (372)
T 1k8k_C 239 TLA-SETLPLLAVTFITESS---------LVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDK 307 (372)
T ss_dssp EEE-CSSCCEEEEEEEETTE---------EEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCC
T ss_pred EEc-cCCCCeEEEEEecCCC---------EEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccc
Confidence 999 9999999999999886 77766 899999999988 310
Q ss_pred -cCCC------cccccccccceeEEEcC-CCC---ceeccccCCCCCCCccccC
Q 019326 297 -EKPL------PLAEAKTNSRLTCLAGS-STK---SFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 297 -~~~~------~~~~~~~~~~i~~~~~s-~~~---~~~~~~~~~~~~~~~~~~~ 339 (343)
.... ......+...|+++++. +++ .+++.+..|+.++.++...
T Consensus 308 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 308 KASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp CC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred ccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 0000 11112456689999965 666 9999999999888776543
No 62
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=271.64 Aligned_cols=265 Identities=13% Similarity=0.163 Sum_probs=224.4
Q ss_pred eEEecc---CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-C----ceEEEeeCCCeEEEEEcCCCe-
Q 019326 3 LIAGSY---EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-G----TAAASGGTDDTIHLYDLSTSS- 73 (343)
Q Consensus 3 l~~g~~---d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~----~~l~s~~~dg~i~iwd~~~~~- 73 (343)
+++|+. ||.|++||+.. ++ ...... .+|..+|++++|+ . ++|++|+.||.|++||+.+++
T Consensus 34 ~~~~s~~~~d~~v~iw~~~~-------~~---~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 102 (357)
T 3i2n_A 34 VTMGNFARGTGVIQLYEIQH-------GD---LKLLRE-IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM 102 (357)
T ss_dssp EEEEC--CCCEEEEEEEECS-------SS---EEEEEE-EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS
T ss_pred EEecCccCCCcEEEEEeCCC-------Cc---ccceee-ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc
Confidence 456665 89999999987 22 222222 2689999999998 3 889999999999999999988
Q ss_pred eeeEeccCCCCCeEEEEE------eCCCCCCCCceEEEeeCCCeEEEEECCCcc-eeeeeeeccc----cEEEEE----E
Q 019326 74 SLGAIHHHESSSVTSLAF------YTPQNLSVPRNLFSTSADGFVSIFDADPFV-LLTSVKVHKK----GVNDLA----V 138 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~------~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~----~v~~i~----~ 138 (343)
.+..+..| ...|.++.| +|++ ++|++++.||.|++||+.+++ .+..+..|.+ .+.+++ |
T Consensus 103 ~~~~~~~~-~~~v~~~~~~~~~~~s~~~-----~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 103 PVYSVKGH-KEIINAIDGIGGLGIGEGA-----PEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp CSEEECCC-SSCEEEEEEESGGGCC-CC-----CEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred cEEEEEec-ccceEEEeeccccccCCCc-----cEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence 88889999 999999965 5666 799999999999999998876 6777776655 889998 7
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeC---CCCEEEEE-eCCcEEEEEcccceeEEEe------
Q 019326 139 HHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDG---SGEKFFMV-TEEKVGIHQAEDAKLLCEL------ 208 (343)
Q Consensus 139 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~i~~~d~~~~~~~~~~------ 208 (343)
+|+++++++++.||.|++||+++++......+...+.+++|+| ++..++++ .++.|++||+++++....+
T Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 256 (357)
T 3i2n_A 177 NQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEK 256 (357)
T ss_dssp C-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEE
T ss_pred CCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccC
Confidence 8899999999999999999999999888888889999999999 89999999 8999999999987765444
Q ss_pred cCCcceEEeeecCC-C-eEEEEeCCCcEEEEECCCC-------------------ceeEEecccccccEEEEEEEecCCC
Q 019326 209 DGKKRILCAAPGEN-G-VLFTGGEDRSITAWDTNSG-------------------KVAYCIEDAHSARVKGIVVLTKNDG 267 (343)
Q Consensus 209 ~~~~~i~~~~~~~~-~-~l~~~~~dg~i~i~d~~~~-------------------~~~~~~~~~h~~~v~~~~~~~~~~~ 267 (343)
.|...|.+++|++. . ++++++.||.|++||++++ +.+..+. +|...|++++|+|++.
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~- 334 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT-LSTQPISSLDWSPDKR- 334 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE-CCSSCEEEEEECSSST-
T ss_pred CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccc-cCCCCeeEEEEcCCCC-
Confidence 48889999999964 4 7999999999999999754 3566677 8999999999999987
Q ss_pred CCCCCCCeEEE-EEcCCCcEEEEeccCc
Q 019326 268 GSTAENPYLVA-SASSDGVICVWDVRMA 294 (343)
Q Consensus 268 ~~~~~~~~~l~-s~~~dg~i~vwd~~~~ 294 (343)
+|+ +++.||.|++||+.+.
T Consensus 335 --------~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 335 --------GLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp --------TEEEEEETTSEEEEEEECC-
T ss_pred --------eEEEEecCCCcEEEEECCCc
Confidence 777 8999999999999875
No 63
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=260.47 Aligned_cols=264 Identities=17% Similarity=0.228 Sum_probs=223.8
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
+++.+.|++|+|||+.+ ++ ......+.+|...|++++|+ +++|++|+.||.|++||+.+++.+..+.+
T Consensus 38 ~lAvg~D~tV~iWd~~t-------g~---~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~ 107 (318)
T 4ggc_A 38 VLAVALDNSVYLWSASS-------GD---ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS 107 (318)
T ss_dssp EEEEEETTEEEEEETTT-------CC---EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEeCCEEEEEECCC-------CC---EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecC
Confidence 34555699999999987 22 33444566889999999999 89999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc-ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF-VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL 159 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~ 159 (343)
| ...+.++.+.+ ..+++++.++.+++|+.... ..+..+.+|...+..+.+.++++++++++.|+.|++||+
T Consensus 108 h-~~~~~~~~~~~-------~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 108 H-SARVGSLSWNS-------YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp C-SSCEEEEEEET-------TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred c-cceEEEeecCC-------CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence 9 88888776653 57999999999999998764 466778899999999999999999999999999999999
Q ss_pred cCCcee-----EEEEcCCcceEEEEeCCCCEEEE---E-eCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEE--
Q 019326 160 VRGRRS-----FYHKIGKEASLIKFDGSGEKFFM---V-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFT-- 227 (343)
Q Consensus 160 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~-- 227 (343)
++++.. ........+..+.+.|.+..++. + .++.|++||.+.........+...+..+.+.+ ++.+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 259 (318)
T 4ggc_A 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH 259 (318)
T ss_dssp SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEE
Confidence 887532 23334567889999997765442 2 57889999999999988888889999999884 455554
Q ss_pred EeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 228 GGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 228 ~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
|+.|+.|++||+++++++.++. +|...|++++|+|++. +|+|||.||+|+|||+.+.
T Consensus 260 g~~d~~i~iwd~~~~~~~~~l~-gH~~~V~~l~~spdg~---------~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 260 GFAQNQLVIWKYPTMAKVAELK-GHTSRVLSLTMSPDGA---------TVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CTTTCCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSS---------CEEEEETTTEEEEECCSCC
T ss_pred EcCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCC---------EEEEEecCCeEEEEECCCC
Confidence 4479999999999999999999 9999999999999887 9999999999999999764
No 64
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-39 Score=284.44 Aligned_cols=269 Identities=13% Similarity=0.092 Sum_probs=209.7
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecC--------ceEEEeeCCCeEEEEEcCCCee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSG--------TAAASGGTDDTIHLYDLSTSSS 74 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--------~~l~s~~~dg~i~iwd~~~~~~ 74 (343)
|++++.|+.|+||++... + ........+.+|.+.|.+++|+. .+||+++.||+|++||+.+++.
T Consensus 176 laS~s~D~tI~iWd~~~~-------~-~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~ 247 (524)
T 2j04_B 176 FDKEKHSSCIQIFKMNTS-------T-LHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNAT 247 (524)
T ss_dssp ------CEEEEEEEEETT-------T-CCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSS
T ss_pred hccCCCCceEEEEEccCC-------C-CCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcc
Confidence 577889999999999862 2 11223345667889999999983 5899999999999999987642
Q ss_pred -----------eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc-eeeeeeeccccEEEE--EEec
Q 019326 75 -----------LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV-LLTSVKVHKKGVNDL--AVHH 140 (343)
Q Consensus 75 -----------~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~i--~~~~ 140 (343)
...+.+| ...|++++|++++ .|++|+.||+|++||+++++ +...+.+|...|.++ +|+|
T Consensus 248 ~~~~~~~~~~p~~~l~~h-~~~v~sv~~s~~~------~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~ 320 (524)
T 2j04_B 248 DVHVFKMCEKPSLTLSLA-DSLITTFDFLSPT------TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD 320 (524)
T ss_dssp SSSEEECCCSCSEEECCT-TTCEEEEEESSSS------EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT
T ss_pred ccccceeecCceEEEEcC-CCCEEEEEecCCC------eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC
Confidence 2366778 8999999999864 89999999999999998764 456688999999999 5788
Q ss_pred CC-CEEEEEeCCCeEEEEEccCCceeEEEE-c-C-CcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcce
Q 019326 141 SG-KLALTVGRDDCLAMVNLVRGRRSFYHK-I-G-KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRI 214 (343)
Q Consensus 141 ~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i 214 (343)
++ .+|++++.|++|++||+++++...... + . ..+.+++|+|+++.++++ .++.|++||++++..+..+. |...|
T Consensus 321 ~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V 400 (524)
T 2j04_B 321 FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTI 400 (524)
T ss_dssp TSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCE
T ss_pred CCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCce
Confidence 87 899999999999999999877554332 2 2 247889999999999988 88999999999988766655 88999
Q ss_pred EEeeecC-CCeEEEEeCCCcEEEEECCCC--------------------------------------------ceeEEec
Q 019326 215 LCAAPGE-NGVLFTGGEDRSITAWDTNSG--------------------------------------------KVAYCIE 249 (343)
Q Consensus 215 ~~~~~~~-~~~l~~~~~dg~i~i~d~~~~--------------------------------------------~~~~~~~ 249 (343)
.+++|++ +.+|++|+.||+|++||+..+ ..+..+.
T Consensus 401 ~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~ 480 (524)
T 2j04_B 401 TAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKID 480 (524)
T ss_dssp EEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC------------
T ss_pred EEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeec
Confidence 9999995 679999999999999985321 1112233
Q ss_pred ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 250 DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 250 ~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
+|...|.+++|+|++. .+..+++|+.||.|+||+++-
T Consensus 481 -gh~~~V~~Vafsp~~~------~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 481 -AHGINITCTKWNETSA------GGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp --CCCSCCCEEECCSTT------TTTEEEEECTTSEEEEEECSC
T ss_pred -CCCceEEEEECCCCCC------ccHHHHhhccCceEEEEEccc
Confidence 5778888899988853 123899999999999999874
No 65
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.7e-39 Score=277.38 Aligned_cols=267 Identities=16% Similarity=0.188 Sum_probs=225.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.||.|++||+.. ......+.+|...|++++|+ +++|++|+.|+.|++||+.+++.+..+.
T Consensus 111 ~l~~~~~dg~i~iwd~~~------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 178 (420)
T 3vl1_A 111 RFILGTTEGDIKVLDSNF------------NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI 178 (420)
T ss_dssp EEEEEETTSCEEEECTTS------------CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE
T ss_pred EEEEEECCCCEEEEeCCC------------cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc
Confidence 588999999999999876 34556667999999999998 7899999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeee---ccccEEEEE-------------------
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKV---HKKGVNDLA------------------- 137 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~i~------------------- 137 (343)
+| ...|.+++|+|++ ++|++++.|++|++||+++++.+..+.. |...|.+++
T Consensus 179 ~h-~~~v~~~~~~~~~-----~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~ 252 (420)
T 3vl1_A 179 GH-RATVTDIAIIDRG-----RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNN 252 (420)
T ss_dssp CC-SSCEEEEEEETTT-----TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCT
T ss_pred CC-CCcEEEEEEcCCC-----CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccc
Confidence 99 9999999999998 8999999999999999999998888875 334455544
Q ss_pred --EecCCCEEEEEeCCCeEEEEEccCCceeEEEEc--CCcceEEEEeCCCC-EEEEE-eCCcEEEEEccccee-EEEec-
Q 019326 138 --VHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI--GKEASLIKFDGSGE-KFFMV-TEEKVGIHQAEDAKL-LCELD- 209 (343)
Q Consensus 138 --~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~-~~~~i~~~d~~~~~~-~~~~~- 209 (343)
|+|++++|++++.||.|++||+++++....... ...+.+++|+|++. +++++ .++.|++||+++++. +..+.
T Consensus 253 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 253 LEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp TCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE
T ss_pred eEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc
Confidence 578899999999999999999999987766543 46799999999999 88888 899999999998753 55554
Q ss_pred -CCcceEEeeecCCCeEEEEeCCCcEEEEECCCC---------ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEE
Q 019326 210 -GKKRILCAAPGENGVLFTGGEDRSITAWDTNSG---------KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVAS 279 (343)
Q Consensus 210 -~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s 279 (343)
+...+.++.+.++++|++++.||.|++||+... .....+. .|...|.+++|+|++. .++ .+++
T Consensus 333 ~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~-----~~g-~l~a 405 (420)
T 3vl1_A 333 NEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLV-SNDDAVSQFCYVSDDE-----SNG-EVLE 405 (420)
T ss_dssp STTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEEC-CSSCCCCEEEEECCSS-----SSC-EEEE
T ss_pred cCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEc-cCCcceEEEEEccCCC-----Ccc-eEEE
Confidence 677899998888889999999999999998863 2223344 7889999999999874 122 4666
Q ss_pred EcCCCcEEEEeccC
Q 019326 280 ASSDGVICVWDVRM 293 (343)
Q Consensus 280 ~~~dg~i~vwd~~~ 293 (343)
.+.+|.+.+|++++
T Consensus 406 ~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 406 VGKNNFCALYNLSN 419 (420)
T ss_dssp EETTTEEEEEESCC
T ss_pred EcCCceEEEEeccC
Confidence 66789999999975
No 66
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-38 Score=274.42 Aligned_cols=260 Identities=12% Similarity=0.104 Sum_probs=233.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.||.|++||.. ......+.+|..+|.+++|+ +++|++++.||.|++||+.+++.+..+.
T Consensus 122 ~l~~~~~dg~i~i~~~~-------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 122 SIVTGVENGELRLWNKT-------------GALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp EEEEEETTSCEEEEETT-------------SCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred EEEEEeCCCeEEEEeCC-------------CCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee
Confidence 48999999999999933 24556677899999999998 8899999999999999999999999888
Q ss_pred cCCCCC---------------eEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCE
Q 019326 80 HHESSS---------------VTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKL 144 (343)
Q Consensus 80 ~~~~~~---------------v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 144 (343)
.+ ... +.+++|++++ .+++++.+|.|++||+.+++.+..+..|...|.+++|+|++++
T Consensus 189 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 261 (425)
T 1r5m_A 189 LK-ETGGSSINAENHSGDGSLGVDVEWVDDD------KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKL 261 (425)
T ss_dssp CC----------------CCCBSCCEEEETT------EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTE
T ss_pred cc-ccCccceeeccccCCcceeeEEEEcCCC------EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCE
Confidence 77 555 9999999987 7999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC
Q 019326 145 ALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE 221 (343)
Q Consensus 145 l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~ 221 (343)
|++++.|+.|++||+++++...... +...+.+++|+|++ .++++ .++.+++||+++++.+..+. +..++.+++|++
T Consensus 262 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~ 340 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQ 340 (425)
T ss_dssp EEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECT
T ss_pred EEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcC
Confidence 9999999999999999988766654 56789999999999 77777 89999999999999888887 688999999984
Q ss_pred -CCeEEEEeCCCcEEEEECCCCc--------------------eeEEecccccc--cEEEEEEEecCCCCCCCCCCeEEE
Q 019326 222 -NGVLFTGGEDRSITAWDTNSGK--------------------VAYCIEDAHSA--RVKGIVVLTKNDGGSTAENPYLVA 278 (343)
Q Consensus 222 -~~~l~~~~~dg~i~i~d~~~~~--------------------~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~~~l~ 278 (343)
+++|++++.||.|++||+++++ .+..+. .|.. .|++++|+|++. +|+
T Consensus 341 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~---------~l~ 410 (425)
T 1r5m_A 341 DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQ-SSQDNDYIFDLSWNCAGN---------KIS 410 (425)
T ss_dssp TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEEC-CTTCCCCEEEEEECTTSS---------EEE
T ss_pred CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhc-CcccCCceEEEEccCCCc---------eEE
Confidence 6799999999999999999888 888888 8866 999999999987 999
Q ss_pred EEcCCCcEEEEecc
Q 019326 279 SASSDGVICVWDVR 292 (343)
Q Consensus 279 s~~~dg~i~vwd~~ 292 (343)
+++.||.|++||++
T Consensus 411 ~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 411 VAYSLQEGSVVAIP 424 (425)
T ss_dssp EEESSSCCEEEECC
T ss_pred EEecCceEEEEeec
Confidence 99999999999986
No 67
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=273.30 Aligned_cols=290 Identities=13% Similarity=0.098 Sum_probs=235.2
Q ss_pred EEecCCCCCeEEEEec--C-ceEEEeeC---CCeEEEEEcCCCeeeeEec-cCCCCCeEEEEEeCC---CCCCCCceEEE
Q 019326 36 FSYPAHLSPITTVAVS--G-TAAASGGT---DDTIHLYDLSTSSSLGAIH-HHESSSVTSLAFYTP---QNLSVPRNLFS 105 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~--~-~~l~s~~~---dg~i~iwd~~~~~~~~~~~-~~~~~~v~~l~~~~~---~~~~~~~~l~s 105 (343)
..+.+|...|++++|+ + .++++|+. ||.|++||+.+++...... .| ...|.+++|+|+ + ++|++
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~-----~~l~~ 85 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEK-AKPIKCGTFGATSLQQ-----RYLAT 85 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEE-SSCEEEEECTTCCTTT-----CCEEE
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecc-cCcEEEEEEcCCCCCC-----ceEEE
Confidence 3456899999999999 4 45566766 9999999999987765543 56 899999999998 5 69999
Q ss_pred eeCCCeEEEEECCCcc-eeeeeeeccccEEEEEE------ecCCCEEEEEeCCCeEEEEEccCCc-eeEEEEc-----CC
Q 019326 106 TSADGFVSIFDADPFV-LLTSVKVHKKGVNDLAV------HHSGKLALTVGRDDCLAMVNLVRGR-RSFYHKI-----GK 172 (343)
Q Consensus 106 ~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~i~~------~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~-----~~ 172 (343)
|+.||.|++||+.+++ .+..+.+|...|.+++| +|++++|++++.|+.|++||+++++ ....... ..
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCC
T ss_pred ecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCC
Confidence 9999999999999887 88999999999999955 6789999999999999999999887 4444432 22
Q ss_pred cceEEE----EeCCCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecC----CCeEEEEeCCCcEEEEECCCCc
Q 019326 173 EASLIK----FDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE----NGVLFTGGEDRSITAWDTNSGK 243 (343)
Q Consensus 173 ~~~~~~----~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~----~~~l~~~~~dg~i~i~d~~~~~ 243 (343)
.+.+++ |+|++++++++ .++.|++||+++++......+...+.+++|++ ++++++++.||.|++||+++++
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 677777 67899999999 78999999999999988888999999999984 6799999999999999998765
Q ss_pred eeEE-----ecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCC--------------Cccc-
Q 019326 244 VAYC-----IEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKP--------------LPLA- 303 (343)
Q Consensus 244 ~~~~-----~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--------------~~~~- 303 (343)
.... +. +|...|++++|+|++. .+|++++.||.|++||++.+..... ..+.
T Consensus 246 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~--------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 316 (357)
T 3i2n_A 246 PTKGFASVSEK-AHKSTVWQVRHLPQNR--------ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQN 316 (357)
T ss_dssp TTTEEEEEEEE-CCSSCEEEEEEETTEE--------EEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEE
T ss_pred cccceeeeccC-CCcCCEEEEEECCCCC--------cEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeec
Confidence 4433 33 7999999999998764 1699999999999999987542210 0111
Q ss_pred ccccccceeEEEcCCCCceec-cccCCCCCCCccccCc
Q 019326 304 EAKTNSRLTCLAGSSTKSFKR-PQIGDSAPKGEEKASM 340 (343)
Q Consensus 304 ~~~~~~~i~~~~~s~~~~~~~-~~~~~~~~~~~~~~~~ 340 (343)
...+...|.+++|+|++.+++ .+..|+.++.++..+.
T Consensus 317 ~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 317 VTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred cccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 123456799999999999998 7889998887776554
No 68
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-39 Score=299.63 Aligned_cols=314 Identities=11% Similarity=0.021 Sum_probs=238.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
.||+|+.||.|++|+... ......+ .|..+|.+++|+ +++|++++.|+.|++||+.+++.+..+.
T Consensus 31 ~lAsgs~Dg~I~lw~~~~------------~~~~~~~-~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~- 96 (902)
T 2oaj_A 31 LLAIATVTGEVHIYGQQQ------------VEVVIKL-EDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVF- 96 (902)
T ss_dssp EEEEEETTSEEEEECSTT------------CEEEEEC-SSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEE-
T ss_pred EEEEEeCCCEEEEEeCCC------------cEEEEEc-CCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEc-
Confidence 589999999999999765 2233333 488999999999 7889999999999999999999988886
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCccee-----------eeeeeccccEEEEEEecC-CCEEEEE
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL-----------TSVKVHKKGVNDLAVHHS-GKLALTV 148 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----------~~~~~~~~~v~~i~~~~~-~~~l~~~ 148 (343)
| ...|++++|+|++ ++|++|+.||+|++||++++++. ..+.+|.+.|.+++|+|+ +..++++
T Consensus 97 ~-~~~V~~v~~sp~g-----~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 97 V-PGKITSIDTDASL-----DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp C-SSCEEEEECCTTC-----SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred C-CCCEEEEEECCCC-----CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence 5 5899999999999 89999999999999999887653 234668899999999996 4789999
Q ss_pred eCCCeEEEEEccCCceeEEEEcC-------------------CcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEE-
Q 019326 149 GRDDCLAMVNLVRGRRSFYHKIG-------------------KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCE- 207 (343)
Q Consensus 149 ~~d~~i~~wd~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~- 207 (343)
+.||.| +||+++++........ ..+.+++|+|++.+|+++ .|+.|++||+++++.+..
T Consensus 171 ~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r 249 (902)
T 2oaj_A 171 YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMAR 249 (902)
T ss_dssp CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEE
Confidence 999999 9999998877665433 569999999999999999 899999999998887653
Q ss_pred -ec-----------------CCcceEEeeec----CC--CeEEEEeCC-----CcEEEEE--------------------
Q 019326 208 -LD-----------------GKKRILCAAPG----EN--GVLFTGGED-----RSITAWD-------------------- 238 (343)
Q Consensus 208 -~~-----------------~~~~i~~~~~~----~~--~~l~~~~~d-----g~i~i~d-------------------- 238 (343)
+. +..+|.+++|+ ++ .++++|+.+ ..+.+|+
T Consensus 250 ~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~ 329 (902)
T 2oaj_A 250 TVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYA 329 (902)
T ss_dssp CSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHH
T ss_pred eecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhc
Confidence 21 13367888774 21 345555443 1444444
Q ss_pred ---------------------------------------------------CCCCceeEE-------ecccccccEEEEE
Q 019326 239 ---------------------------------------------------TNSGKVAYC-------IEDAHSARVKGIV 260 (343)
Q Consensus 239 ---------------------------------------------------~~~~~~~~~-------~~~~h~~~v~~~~ 260 (343)
+.++..... +. .|...|++++
T Consensus 330 ~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~-~~~~~v~~~~ 408 (902)
T 2oaj_A 330 NPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLS-WLRPLATTSM 408 (902)
T ss_dssp SCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGT-TBTTBEEEEE
T ss_pred CccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCccc-ccCCCeeEEE
Confidence 433322211 11 3446677777
Q ss_pred EEecC---------------------C----CCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccc--------ccc
Q 019326 261 VLTKN---------------------D----GGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAE--------AKT 307 (343)
Q Consensus 261 ~~~~~---------------------~----~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--------~~~ 307 (343)
+++.. . ...+++++++|+||+.|++|++||+.++..... .... ..+
T Consensus 409 ~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~-~~~~~~l~~~~~~~h 487 (902)
T 2oaj_A 409 AASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDN-ASFEVNLSRTLNKAK 487 (902)
T ss_dssp EEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTT-BCEEEEHHHHTTCSS
T ss_pred EEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCC-ceEEeechhhcCCCC
Confidence 75410 0 012357888999999999999999998742211 1111 134
Q ss_pred ccceeEEEcCCCCceeccccCCCCCCCcccc
Q 019326 308 NSRLTCLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 308 ~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
...|.+++|+|++++++.+..|+.++.++..
T Consensus 488 ~~~V~svafspdg~~LAsgs~DgtV~lwd~~ 518 (902)
T 2oaj_A 488 ELAVDKISFAAETLELAVSIETGDVVLFKYE 518 (902)
T ss_dssp SCCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred CCceeEEEecCCCCeEEEEecCcEEEEEEec
Confidence 5679999999999999999999988877654
No 69
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.4e-38 Score=309.90 Aligned_cols=306 Identities=15% Similarity=0.167 Sum_probs=263.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.+++|+.|+.|++||+.. ......+.+|.++|++++|+ +++|++++.||.|++||+.+++....+.
T Consensus 715 ~l~sg~~d~~v~vwd~~~------------~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 782 (1249)
T 3sfz_A 715 LLATGSNDFFLKLWDLNQ------------KECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSIN 782 (1249)
T ss_dssp EEEEEETTSCEEEEETTS------------SSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEE
T ss_pred EEEEEeCCCeEEEEECCC------------cchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceec
Confidence 478999999999999987 34566778999999999999 8899999999999999998765443321
Q ss_pred -------------------------------------------------------cCCCCCeEEEEEeCCCCCCCCceEE
Q 019326 80 -------------------------------------------------------HHESSSVTSLAFYTPQNLSVPRNLF 104 (343)
Q Consensus 80 -------------------------------------------------------~~~~~~v~~l~~~~~~~~~~~~~l~ 104 (343)
+| ...|.+++|+|++ .+++
T Consensus 783 ~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~v~~~~~sp~~-----~~l~ 856 (1249)
T 3sfz_A 783 VKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGH-HSTIQYCDFSPYD-----HLAV 856 (1249)
T ss_dssp CCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSS-SSCCCEEEECSST-----TEEE
T ss_pred ccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCC-CCceEEEEEcCCC-----CEEE
Confidence 45 6789999999998 8999
Q ss_pred EeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCC----------------------
Q 019326 105 STSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG---------------------- 162 (343)
Q Consensus 105 s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~---------------------- 162 (343)
+++.||.|++||+.+++.+..+.+|...|.+++|+|+++++++++.||.|++||+.+.
T Consensus 857 ~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1249)
T 3sfz_A 857 IALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETM 936 (1249)
T ss_dssp EECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEE
T ss_pred EEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcE
Confidence 9999999999999999999999999999999999999999999999999999996531
Q ss_pred ---------------------------------------------------------ceeEE-EEcCCcceEEEEeCCCC
Q 019326 163 ---------------------------------------------------------RRSFY-HKIGKEASLIKFDGSGE 184 (343)
Q Consensus 163 ---------------------------------------------------------~~~~~-~~~~~~~~~~~~~~~~~ 184 (343)
+.... ..+...+.+++|+|+++
T Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~ 1016 (1249)
T 3sfz_A 937 VLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGK 1016 (1249)
T ss_dssp EEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSS
T ss_pred EEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCC
Confidence 00000 01234577899999999
Q ss_pred EEEEE-eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEe
Q 019326 185 KFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLT 263 (343)
Q Consensus 185 ~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~ 263 (343)
+++++ .|+.+++||+.+++......|...+.++.++++..+++++.||.|++||+.+++....+. +|...|.+++|+|
T Consensus 1017 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~~v~~~~~s~ 1095 (1249)
T 3sfz_A 1017 TLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFT-CHQGTVLSCAISS 1095 (1249)
T ss_dssp CEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEE-CCSSCCCCEEECS
T ss_pred EEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEc-ccCCcEEEEEECC
Confidence 99999 899999999999998877779999999999988899999999999999999999999998 9999999999999
Q ss_pred cCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 264 KNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 264 ~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
++. ++++++.||.|++||+.++...... ..+...|.+++|+|++.+++.+..++.++.++...
T Consensus 1096 d~~---------~l~s~s~d~~v~iwd~~~~~~~~~l----~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~ 1158 (1249)
T 3sfz_A 1096 DAT---------KFSSTSADKTAKIWSFDLLSPLHEL----KGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSD 1158 (1249)
T ss_dssp SSS---------SCEEECCSSCCCEECSSSSSCSBCC----CCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSS
T ss_pred CCC---------EEEEEcCCCcEEEEECCCcceeeee----ccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 987 9999999999999999987532211 13456799999999999999999999888777543
No 70
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-39 Score=280.09 Aligned_cols=268 Identities=12% Similarity=0.117 Sum_probs=219.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcC---CCeeee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLS---TSSSLG 76 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~---~~~~~~ 76 (343)
.|++|+.||.|++||+...+. .........+ +|..+|++++|+ +++|++|+.||.|++||+. +++...
T Consensus 78 ~l~s~s~dg~v~vwd~~~~~~------~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~ 150 (437)
T 3gre_A 78 YLITGSDQGVIKIWNLKEIIV------GEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVK 150 (437)
T ss_dssp EEEEEETTSEEEEEEHHHHHT------TCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEE
T ss_pred EEEEecCCceEEEeECccccc------Ccccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceee
Confidence 589999999999999876110 0112223333 499999999998 7899999999999999995 444433
Q ss_pred Eec----------c--CCCCCeEEEE--EeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeee--ccccEEEEEEec
Q 019326 77 AIH----------H--HESSSVTSLA--FYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKV--HKKGVNDLAVHH 140 (343)
Q Consensus 77 ~~~----------~--~~~~~v~~l~--~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~i~~~~ 140 (343)
.+. . + ...+.++. +++++ .+|++|+.|+.|++||+++++++..+.. |...|.+++|+|
T Consensus 151 ~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~ 224 (437)
T 3gre_A 151 FLNCECIRKINLKNFGK-NEYAVRMRAFVNEEK-----SLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE 224 (437)
T ss_dssp EEEEEEEEEEEGGGGSS-CCCEEEEEEEECSSC-----EEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT
T ss_pred ccccceeEEEEccCccc-ccCceEEEEEEcCCC-----CEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC
Confidence 322 1 3 56777777 44666 7999999999999999999999999998 889999999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceeEEEEc--CCcceEEEEeC----CCCEEEEE-eCCcEEEEEcccceeEEEec----
Q 019326 141 SGKLALTVGRDDCLAMVNLVRGRRSFYHKI--GKEASLIKFDG----SGEKFFMV-TEEKVGIHQAEDAKLLCELD---- 209 (343)
Q Consensus 141 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~-~~~~i~~~d~~~~~~~~~~~---- 209 (343)
++++|++++.||.|++||+++++.+..... ...+.+++++| ++.+++++ .|+.|++||+++++.+..+.
T Consensus 225 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 304 (437)
T 3gre_A 225 ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDE 304 (437)
T ss_dssp TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSS
T ss_pred CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCC
Confidence 999999999999999999999888776643 45688896654 67789988 89999999999998877765
Q ss_pred -----------------------CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEeccc---------------
Q 019326 210 -----------------------GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDA--------------- 251 (343)
Q Consensus 210 -----------------------~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--------------- 251 (343)
|...|.+++++++++|++|+.||.|++||+.+++....+. +
T Consensus 305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 383 (437)
T 3gre_A 305 QPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVI-SPSRFSDVFIPTQVTA 383 (437)
T ss_dssp CCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEE-CC--CCCEEEEEEEET
T ss_pred CCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEe-cccccCceEEEEEeec
Confidence 4456888899877899999999999999999988777666 3
Q ss_pred ----------------------ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 252 ----------------------HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 252 ----------------------h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
|...|+++++++.... .+|++|+.||.|+||+
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~-------~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 384 NLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDET-------PLLVACDNSGLIGIFQ 437 (437)
T ss_dssp TEEEEEEECC-------------CCCEEEEEEEESSSS-------EEEEEEETTSCEEEEC
T ss_pred ceEEEEEecccccccccCcccccccceeeEeeeccCCc-------eEEEEEcCCceEEEeC
Confidence 8899999999998321 2999999999999995
No 71
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.9e-37 Score=270.27 Aligned_cols=259 Identities=17% Similarity=0.263 Sum_probs=231.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHH 81 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 81 (343)
.|++|+.||.|++||+.. .+....+.+|...|.+++|+++.+++|+.||.|++||+.+++.+..+..|
T Consensus 171 ~l~s~~~dg~i~vwd~~~------------~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~ 238 (445)
T 2ovr_B 171 IIISGSTDRTLKVWNAET------------GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGH 238 (445)
T ss_dssp EEEEEETTSCEEEEETTT------------TEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECC
T ss_pred EEEEEeCCCeEEEEECCc------------CcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 479999999999999987 35567788999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccC
Q 019326 82 ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR 161 (343)
Q Consensus 82 ~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~ 161 (343)
...|.+++| ++ +++++|+.||.|++||+++++++..+.+|...|.+++| ++.++++++.|+.|++||+++
T Consensus 239 -~~~v~~~~~--~~-----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~ 308 (445)
T 2ovr_B 239 -VAAVRCVQY--DG-----RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 308 (445)
T ss_dssp -SSCEEEEEE--CS-----SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTT
T ss_pred -cccEEEEEE--CC-----CEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCC
Confidence 999999999 44 68999999999999999999999999999999999999 778999999999999999999
Q ss_pred CceeEEEEc-CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec----CCcceEEeeecCCCeEEEEeCCCcEE
Q 019326 162 GRRSFYHKI-GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD----GKKRILCAAPGENGVLFTGGEDRSIT 235 (343)
Q Consensus 162 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~----~~~~i~~~~~~~~~~l~~~~~dg~i~ 235 (343)
++.+..... ...+.++.+ ++++++++ .|+.|++||+++++.+..+. |...|.++++ +++++++|+.||.|+
T Consensus 309 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~v~ 385 (445)
T 2ovr_B 309 GNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF-NKNFVITSSDDGTVK 385 (445)
T ss_dssp CCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE-CSSEEEEEETTSEEE
T ss_pred CCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE-CCCEEEEEeCCCeEE
Confidence 987765543 344555555 56788888 89999999999999998887 6788999999 578999999999999
Q ss_pred EEECCCCceeEEec----ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCc----EEEEeccCc
Q 019326 236 AWDTNSGKVAYCIE----DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGV----ICVWDVRMA 294 (343)
Q Consensus 236 i~d~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~----i~vwd~~~~ 294 (343)
+||+.+++.+..+. ..|...|++++|+|++. ++++|+.||+ |.+||++..
T Consensus 386 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---------~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 386 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL---------VCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEE---------EEEEECSSSSSCCEEEEEECCCC
T ss_pred EEECCCCceeeeeeccccCCCCceEEEEEecCCEE---------EEEEcccCCCCccEEEEEECCCC
Confidence 99999999998882 26889999999999887 9999999998 999999863
No 72
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.8e-39 Score=280.08 Aligned_cols=268 Identities=18% Similarity=0.157 Sum_probs=211.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
.||+|+.||.|+|||+... . ......+.+|.++|++|+|+ +++|++|+.||+|++||++++......
T Consensus 134 ~lasGs~dg~i~lWd~~~~-------~---~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 203 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIK-------D---KPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFA 203 (435)
T ss_dssp CEEEEETTSCEEEECSSCC-------S---CCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEE
T ss_pred EEEEEeCCCEEEEEECCCC-------C---ceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEe
Confidence 3789999999999999762 1 23345567899999999997 679999999999999999876544333
Q ss_pred ccC-CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCC-EEEEEeCCCeEEE
Q 019326 79 HHH-ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGK-LALTVGRDDCLAM 156 (343)
Q Consensus 79 ~~~-~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~~~d~~i~~ 156 (343)
..+ ....+.+++|+|++ ++|++|+.||.|++||++. +.+..+.+|...|.+++|+|++. ++++++.|+.|++
T Consensus 204 ~~~~~~~~~~~~~~~~~~-----~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~i 277 (435)
T 4e54_B 204 SSDTINIWFCSLDVSASS-----RMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKI 277 (435)
T ss_dssp CCSSCSCCCCCEEEETTT-----TEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCE
T ss_pred ccCCCCccEEEEEECCCC-----CEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeE
Confidence 322 14567899999998 8999999999999999975 66788899999999999999875 7889999999999
Q ss_pred EEccCCceeE----EEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCc------ceEEeeec-CCC
Q 019326 157 VNLVRGRRSF----YHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKK------RILCAAPG-ENG 223 (343)
Q Consensus 157 wd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~------~i~~~~~~-~~~ 223 (343)
||+++.+... ...+...|.+++|+|++.+|+++ .|+.|++||+.+++....+. |.. .+....++ .+.
T Consensus 278 wd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (435)
T 4e54_B 278 WDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYN 357 (435)
T ss_dssp EETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSS
T ss_pred EecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCC
Confidence 9998876432 23456789999999999999999 89999999999987766554 211 12223333 233
Q ss_pred eEEEEe------------CCCcEEEEECCCCceeEEecccccccEEEE-EEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 224 VLFTGG------------EDRSITAWDTNSGKVAYCIEDAHSARVKGI-VVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 224 ~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
+++++. .++.|++||..+++.+..+..+|...|.++ +|+|++. +|++|+ |+.|+||+
T Consensus 358 ~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~---------~lasg~-d~~i~iW~ 427 (435)
T 4e54_B 358 LIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGD---------TLASAM-GYHILIWS 427 (435)
T ss_dssp CEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSS---------CEEEEC-SSEEEECC
T ss_pred EEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCC---------EEEEEc-CCcEEEEE
Confidence 444432 446799999999999988876888999888 5888876 888876 88999999
Q ss_pred ccCcc
Q 019326 291 VRMAI 295 (343)
Q Consensus 291 ~~~~~ 295 (343)
+++++
T Consensus 428 ~~~gk 432 (435)
T 4e54_B 428 QQEAR 432 (435)
T ss_dssp CC---
T ss_pred CCcCe
Confidence 99874
No 73
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.1e-37 Score=282.42 Aligned_cols=247 Identities=16% Similarity=0.262 Sum_probs=214.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCC----CeEEEEEcCCCeee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTD----DTIHLYDLSTSSSL 75 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~d----g~i~iwd~~~~~~~ 75 (343)
.|++|+.||.|++||+..... ...........+.+|..+|.+++|+ +.+|++++.+ +.|++|| +++.+
T Consensus 80 ~l~s~~~dg~v~vw~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~ 153 (615)
T 1pgu_A 80 YLCSGDESGKVIVWGWTFDKE----SNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSL 153 (615)
T ss_dssp EEEEEETTSEEEEEEEEEEGG----GTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEE
T ss_pred EEEEecCCCEEEEEeCCCCcc----cccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcc
Confidence 488999999999999975100 1112346677788899999999999 8899999987 6888888 66788
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccc---cEEEEEEecC-CCEEEEEeCC
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKK---GVNDLAVHHS-GKLALTVGRD 151 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~v~~i~~~~~-~~~l~~~~~d 151 (343)
..+..| ...|.+++|+|++. ..+++++.|+.|++||+.+++.+..+..|.. .|.+++|+|+ +++|++++.|
T Consensus 154 ~~~~~~-~~~v~~~~~~~~~~----~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 228 (615)
T 1pgu_A 154 GEVSGH-SQRINACHLKQSRP----MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD 228 (615)
T ss_dssp EECCSC-SSCEEEEEECSSSS----CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT
T ss_pred eeeecC-CccEEEEEECCCCC----cEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC
Confidence 888888 99999999999981 3899999999999999999999999999999 9999999999 9999999999
Q ss_pred CeEEEEEccCCceeEEE-----EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCC-----cceEEeeec
Q 019326 152 DCLAMVNLVRGRRSFYH-----KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGK-----KRILCAAPG 220 (343)
Q Consensus 152 ~~i~~wd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~-----~~i~~~~~~ 220 (343)
+.|++||+++++.+... .+...+..++|+ ++.+++++ .++.+++||+++++.+..+... ..+.++.+.
T Consensus 229 g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (615)
T 1pgu_A 229 RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT 307 (615)
T ss_dssp CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE
T ss_pred CeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC
Confidence 99999999999988877 567889999999 99999999 7999999999999998888744 678888887
Q ss_pred CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEE
Q 019326 221 ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVV 261 (343)
Q Consensus 221 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~ 261 (343)
+++++++++.||.|++||+.+++.+..+. +|...|.+++|
T Consensus 308 ~~~~l~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~v~~~~~ 347 (615)
T 1pgu_A 308 GNGRIISLSLDGTLNFYELGHDEVLKTIS-GHNKGITALTV 347 (615)
T ss_dssp ETTEEEEEETTSCEEEEETTEEEEEEEEC-CCSSCEEEEET
T ss_pred CCCeEEEEECCCCEEEEECCCCcEEEEEe-CCCCCEEEEEe
Confidence 88899999999999999999988888887 77777766665
No 74
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-39 Score=276.74 Aligned_cols=268 Identities=12% Similarity=0.112 Sum_probs=207.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe---eee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS---SLG 76 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~---~~~ 76 (343)
.|++|+.|+.|++||+.. + .......+.+|..+|++++|+ +++|++++.|+.|++||+.+++ ...
T Consensus 25 ~l~~~~~d~~i~iw~~~~-------~---~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 25 EFVTTTATNQVELYEQDG-------N---GWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp EEECCCSSSCBCEEEEET-------T---EEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEE
T ss_pred EEEEecCCCEEEEEEccC-------C---ceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeee
Confidence 478899999999999986 1 125667788999999999999 7899999999999999999877 666
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc---eeeeeee-ccccEEEEEEecCCCEEEEEeCCC
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV---LLTSVKV-HKKGVNDLAVHHSGKLALTVGRDD 152 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~-~~~~v~~i~~~~~~~~l~~~~~d~ 152 (343)
.+..| ...|.+++|+|++ ++|++++.|+.|++||+++++ ....+.. |...|.+++|+|++++|++++.|+
T Consensus 95 ~~~~~-~~~v~~~~~~~~~-----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 95 VLLRL-NRAATFVRWSPNE-----DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp ECCCC-SSCEEEEECCTTS-----SCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred Eeccc-CCceEEEEECCCC-----CEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 77788 8999999999998 799999999999999998876 4677777 999999999999999999999999
Q ss_pred eEEEEEccC------------------CceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEccccee----EEEec
Q 019326 153 CLAMVNLVR------------------GRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKL----LCELD 209 (343)
Q Consensus 153 ~i~~wd~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~----~~~~~ 209 (343)
.|++||++. ++......+...+.+++|+|++++++++ .|+.|++||+++++. +..+.
T Consensus 169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 248 (377)
T 3dwl_C 169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVK 248 (377)
T ss_dssp CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEE
T ss_pred EEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeec
Confidence 999999953 2233333556779999999999999999 899999999999876 55555
Q ss_pred -CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCc---------------------------------------eeEE-
Q 019326 210 -GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGK---------------------------------------VAYC- 247 (343)
Q Consensus 210 -~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~---------------------------------------~~~~- 247 (343)
|..++.+++|++ +.+|++|+.++.+ +|+..... ....
T Consensus 249 ~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (377)
T 3dwl_C 249 LSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNM 327 (377)
T ss_dssp CSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC----------------
T ss_pred CCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccch
Confidence 778899999994 5677777655544 77664211 0000
Q ss_pred -----------ecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 248 -----------IEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 248 -----------~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
+...|...|+++++.+.... +...|+|++.||.|++||+
T Consensus 328 ~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~-----~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 328 DLKGSSQSISSLPTVHQNMIATLRPYAGTPG-----NITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ---------CCCSSSCSSCEEEEEEEEEETT-----EEEEEEEEETTSEEEEECC
T ss_pred hhccccccccccCccccceeEEEeccCCCCC-----ceEEEEeecCCCcEEEecC
Confidence 11139999999998776531 1125999999999999986
No 75
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=263.76 Aligned_cols=283 Identities=14% Similarity=0.142 Sum_probs=232.2
Q ss_pred eEEeEEecCCCCCeEEEEec-C----ceEEEeeCCCeEEEEEcCC-Ceee-eEeccCCCCCeEEEEEeCCCCCCCCceEE
Q 019326 32 LTQLFSYPAHLSPITTVAVS-G----TAAASGGTDDTIHLYDLST-SSSL-GAIHHHESSSVTSLAFYTPQNLSVPRNLF 104 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~-~----~~l~s~~~dg~i~iwd~~~-~~~~-~~~~~~~~~~v~~l~~~~~~~~~~~~~l~ 104 (343)
...+..+.+|.+.|++++|+ . ++|++|+.||.|++||+.+ ++.+ ..+..| ...|.+++|+|++ ++|+
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~-----~~l~ 102 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH-TGPVLDVCWSDDG-----SKVF 102 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC-SSCEEEEEECTTS-----SEEE
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc-cCCEEEEEECcCC-----CEEE
Confidence 45666788999999999999 3 7999999999999999997 5554 677888 9999999999998 8999
Q ss_pred EeeCCCeEEEEECCCcceeeeeeeccccEEEEEE--ecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCC
Q 019326 105 STSADGFVSIFDADPFVLLTSVKVHKKGVNDLAV--HHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGS 182 (343)
Q Consensus 105 s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~--~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
+++.||.|++||+.+++.+. +..|...|.+++| +|++++|++++.||.|++||+++++.+........+.++.+.+
T Consensus 103 s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~- 180 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY- 180 (368)
T ss_dssp EEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET-
T ss_pred EEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC-
Confidence 99999999999999987666 5669999999999 8899999999999999999999999888888777777777664
Q ss_pred CCEEEEE-eCCcEEEEEcccceeEEEec---CCcceEEeeec-CC----CeEEEEeCCCcEEEEECCCC---ceeEEecc
Q 019326 183 GEKFFMV-TEEKVGIHQAEDAKLLCELD---GKKRILCAAPG-EN----GVLFTGGEDRSITAWDTNSG---KVAYCIED 250 (343)
Q Consensus 183 ~~~~~~~-~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~-~~----~~l~~~~~dg~i~i~d~~~~---~~~~~~~~ 250 (343)
..++++ .++.+.+|+++......... ......++.+. .. ..+++++.||.|++||++.. ..+..+.
T Consensus 181 -~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~- 258 (368)
T 3mmy_A 181 -PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK- 258 (368)
T ss_dssp -TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE-
T ss_pred -CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee-
Confidence 456666 99999999998765443332 33444444443 22 23999999999999999987 5567777
Q ss_pred cccc------------cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCC
Q 019326 251 AHSA------------RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSS 318 (343)
Q Consensus 251 ~h~~------------~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 318 (343)
+|.. +|++++|+|++. +|++++.||.|++||++++...... ..+...|.+++|+|
T Consensus 259 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~~~v~~~~~s~ 325 (368)
T 3mmy_A 259 CHRSNGTNTSAPQDIYAVNGIAFHPVHG---------TLATVGSDGRFSFWDKDARTKLKTS----EQLDQPISACCFNH 325 (368)
T ss_dssp CSEEC----CCCEEECCEEEEEECTTTC---------CEEEEETTSCEEEEETTTTEEEEEC----CCCSSCEEEEEECT
T ss_pred eeecccccccccccccceEEEEEecCCC---------EEEEEccCCeEEEEECCCCcEEEEe----cCCCCCceEEEECC
Confidence 6766 799999999887 9999999999999999987533221 13456799999999
Q ss_pred CCceeccccCCCCCCCccc
Q 019326 319 TKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ 337 (343)
++.+++.+..++..+..+.
T Consensus 326 ~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 326 NGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp TSSCEEEEECCCSTTCGGG
T ss_pred CCCeEEEEecccccccccc
Confidence 9999999999886665553
No 76
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.2e-38 Score=291.89 Aligned_cols=266 Identities=13% Similarity=0.144 Sum_probs=237.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.||.|++||+.+ ...+..+.+|..+|++++|+ +++|++|+.||.|++||+.+++.+..+.
T Consensus 27 ~la~~~~~g~v~iwd~~~------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 94 (814)
T 3mkq_A 27 WVLTTLYSGRVEIWNYET------------QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (814)
T ss_dssp EEEEEETTSEEEEEETTT------------TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEeCCCEEEEEECCC------------CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 488999999999999876 35566777999999999999 8899999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc-ceeeeeeeccccEEEEEEec-CCCEEEEEeCCCeEEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF-VLLTSVKVHKKGVNDLAVHH-SGKLALTVGRDDCLAMV 157 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~d~~i~~w 157 (343)
.| ...|.+++|+|++ ++|++++.||.|++||+.++ .....+.+|...|.+++|+| ++..+++++.||.|++|
T Consensus 95 ~~-~~~v~~~~~s~~~-----~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vw 168 (814)
T 3mkq_A 95 AH-PDYIRSIAVHPTK-----PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (814)
T ss_dssp CC-SSCEEEEEECSSS-----SEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred cC-CCCEEEEEEeCCC-----CEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 99 8999999999999 79999999999999999876 67788889999999999999 88999999999999999
Q ss_pred EccCCceeEEEEcC--CcceEEEEeC--CCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeC
Q 019326 158 NLVRGRRSFYHKIG--KEASLIKFDG--SGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGE 230 (343)
Q Consensus 158 d~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~ 230 (343)
|+.++......... ..+..++|+| ++.+++++ .++.|++||+++++.+..+. |...+.+++|++ +.++++++.
T Consensus 169 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 169 SLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp ETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET
T ss_pred ECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 99888766555443 7789999999 99999999 89999999999999988887 788999999995 569999999
Q ss_pred CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 231 DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 231 dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
||.|++||+.+++.+..+. .|...+.+++|+|++.. .+++++.|+.+.+|++...
T Consensus 249 dg~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 249 DGTLKIWNSSTYKVEKTLN-VGLERSWCIATHPTGRK--------NYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp TSCEEEEETTTCSEEEEEC-CSSSSEEEEEECTTCGG--------GEEEEEETTEEEEEECSCC
T ss_pred CCeEEEEECCCCcEEEEee-cCCCcEEEEEEccCCCc--------eEEEEEeCCCEEEEEcCCC
Confidence 9999999999999999998 89999999999998752 3455555777889987653
No 77
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.6e-39 Score=267.69 Aligned_cols=241 Identities=14% Similarity=0.185 Sum_probs=197.6
Q ss_pred EecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe--eeeEeccCCCCCeEEEEEeCC--CCCCCCceEEEeeCCC
Q 019326 37 SYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS--SLGAIHHHESSSVTSLAFYTP--QNLSVPRNLFSTSADG 110 (343)
Q Consensus 37 ~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~l~~~~~--~~~~~~~~l~s~~~dg 110 (343)
.+.+|.++|++++|+ +++|++|+.|++|++||+.+++ .+..+.+| ...|.+++|+++ + ++|++|+.|+
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH-~~~V~~v~~~~~~~~-----~~l~s~s~D~ 81 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMYG-----NILASCSYDR 81 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECC-SSCEEEEEECCGGGS-----SCEEEEETTS
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCC-CccEEEEEeCCCCCC-----CEEEEEECCC
Confidence 346899999999998 8999999999999999998875 46778899 999999999863 5 6999999999
Q ss_pred eEEEEECCCc--ceeeeeeeccccEEEEEEecC--CCEEEEEeCCCeEEEEEccCCceeEE----EEcCCcceEEEEeCC
Q 019326 111 FVSIFDADPF--VLLTSVKVHKKGVNDLAVHHS--GKLALTVGRDDCLAMVNLVRGRRSFY----HKIGKEASLIKFDGS 182 (343)
Q Consensus 111 ~i~iwd~~~~--~~~~~~~~~~~~v~~i~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~----~~~~~~~~~~~~~~~ 182 (343)
+|++||++++ +....+.+|...|.+++|+|+ +.+|++++.|++|++||++.+..... ..+...+.+++|+|+
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 9999999876 356677889999999999998 78999999999999999987642211 123456788999987
Q ss_pred -----------------CCEEEEE-eCCcEEEEEcccc---eeEEEec-CCcceEEeeecCC-----CeEEEEeCCCcEE
Q 019326 183 -----------------GEKFFMV-TEEKVGIHQAEDA---KLLCELD-GKKRILCAAPGEN-----GVLFTGGEDRSIT 235 (343)
Q Consensus 183 -----------------~~~~~~~-~~~~i~~~d~~~~---~~~~~~~-~~~~i~~~~~~~~-----~~l~~~~~dg~i~ 235 (343)
+++++++ .|+.|++||++.. +....+. |...|.+++|++. .+|++|+.||+|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp CCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred cCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence 3678888 8999999999755 3455555 7889999999854 6899999999999
Q ss_pred EEECCCCc----eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 236 AWDTNSGK----VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 236 i~d~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
+||+.+.. ....+. .|...|.+++|+|++. +|++++.||.|++|+...
T Consensus 242 iw~~~~~~~~~~~~~~~~-~~~~~v~~v~~sp~g~---------~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 242 IWTCDDASSNTWSPKLLH-KFNDVVWHVSWSITAN---------ILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEECSSTTCCCCBCCEEE-ECSSCEEEEEECTTTC---------CEEEEESSSCEEEEEECT
T ss_pred EEEccCccccchhhhhhh-cCCCcEEEEEEcCCCC---------EEEEEcCCCeEEEEEECC
Confidence 99987631 223444 7899999999999987 999999999999999863
No 78
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.7e-37 Score=261.03 Aligned_cols=273 Identities=13% Similarity=0.148 Sum_probs=211.5
Q ss_pred eEEecc-------CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEe-----------eCCCeE
Q 019326 3 LIAGSY-------EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASG-----------GTDDTI 64 (343)
Q Consensus 3 l~~g~~-------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~-----------~~dg~i 64 (343)
|++|+. ++.|++|++...... ............+.+|...|++++++++.+++| +.|+.+
T Consensus 29 l~sGGg~~~~sGi~N~i~~w~~~~~~~~--~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~ 106 (365)
T 4h5i_A 29 LVAGGGGEGNNGIPNKLTVLRVDPTKDT--EKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNENSTKITQGKGNKHL 106 (365)
T ss_dssp EEEEECCSSSSSCCEEEEEEEECTTSSS--HHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCE
T ss_pred EEEECCCccccCCCCEEEEEEEcCCCcc--eeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCCccEEEEecCCCcE
Confidence 566654 335999999763210 011122333456778999999999997777765 457889
Q ss_pred EEEEcCCCeeee----Ee-----ccCCCCCeEEEEEeCCCCCCCCceEE--EeeCCCeEEEEECCCcceeeeeeeccccE
Q 019326 65 HLYDLSTSSSLG----AI-----HHHESSSVTSLAFYTPQNLSVPRNLF--STSADGFVSIFDADPFVLLTSVKVHKKGV 133 (343)
Q Consensus 65 ~iwd~~~~~~~~----~~-----~~~~~~~v~~l~~~~~~~~~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~~~~v 133 (343)
|+|++.+..... .. ..+ ...+.+++|+|++ ++++ +++.|++|++||+++++++..+. |...|
T Consensus 107 r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~fSpDg-----~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V 179 (365)
T 4h5i_A 107 RKFKYDKVNDQLEFLTSVDFDASTNA-DDYTKLVYISREG-----TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEV 179 (365)
T ss_dssp EEEEEETTTTEEEEEEEECSSCCCCT-TCCEEEEEECTTS-----SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCC
T ss_pred EEEEecCCCceEEEeeeeceeecCCc-ccCEEEEEEcCCC-----CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCce
Confidence 999987653221 11 122 4568999999999 6765 45579999999999999988886 78889
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE---cCCcceEEEEeCCCCEEEEE-eCC----cEEEEEcccceeE
Q 019326 134 NDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK---IGKEASLIKFDGSGEKFFMV-TEE----KVGIHQAEDAKLL 205 (343)
Q Consensus 134 ~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~----~i~~~d~~~~~~~ 205 (343)
.+++|+|+++++++++.+ .+.+|+..+++...... +...+..++|+|+++.++++ .++ .+++|++......
T Consensus 180 ~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~ 258 (365)
T 4h5i_A 180 KDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS 258 (365)
T ss_dssp CEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE
T ss_pred EEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceec
Confidence 999999999999998855 57777777777654433 34568899999999999998 555 5788888765432
Q ss_pred ----EEe-cCCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEE
Q 019326 206 ----CEL-DGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVAS 279 (343)
Q Consensus 206 ----~~~-~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s 279 (343)
..+ .|..+|++++|++ +++|++|+.|+.|+|||+++++++..+..+|..+|++++|+|++. +|+|
T Consensus 259 ~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~---------~laS 329 (365)
T 4h5i_A 259 VLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDST---------YVAS 329 (365)
T ss_dssp EEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC---------EEEE
T ss_pred ceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCC---------EEEE
Confidence 223 3778899999994 679999999999999999999999987559999999999999988 9999
Q ss_pred EcCCCcEEEEeccCc
Q 019326 280 ASSDGVICVWDVRMA 294 (343)
Q Consensus 280 ~~~dg~i~vwd~~~~ 294 (343)
+|.|++|+|||+...
T Consensus 330 ~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 330 VSAANTIHIIKLPLN 344 (365)
T ss_dssp EETTSEEEEEECCTT
T ss_pred EeCCCeEEEEEcCCC
Confidence 999999999999754
No 79
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-38 Score=296.17 Aligned_cols=306 Identities=13% Similarity=0.067 Sum_probs=232.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeee----
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSL---- 75 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~---- 75 (343)
.|++++.|+.|++||+.. + +.+..+. |...|++++|+ +++|++|+.||.|++||+.+++..
T Consensus 71 ~L~S~s~D~~v~lWd~~~-------~-----~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i 137 (902)
T 2oaj_A 71 YLVVINAKDTVYVLSLYS-------Q-----KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKL 137 (902)
T ss_dssp EEEEEETTCEEEEEETTT-------C-----SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEE
T ss_pred EEEEEECcCeEEEEECCC-------C-----cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccccee
Confidence 389999999999999986 2 2334443 67899999999 899999999999999999988754
Q ss_pred -------eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeec------------------c
Q 019326 76 -------GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVH------------------K 130 (343)
Q Consensus 76 -------~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------------------~ 130 (343)
..+.+| ...|.+++|+|++ ...+++|+.||.| +||+++++++..+..| .
T Consensus 138 ~~~~~~~~~~~~h-~~~V~sl~~sp~~----~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~ 211 (902)
T 2oaj_A 138 DNLQKSSFFPAAR-LSPIVSIQWNPRD----IGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRT 211 (902)
T ss_dssp CCHHHHHTCSSSC-CCCCCEEEEETTE----EEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBC
T ss_pred ccccccccccccC-CCCeEEEEEccCC----CCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccC
Confidence 233567 8999999999974 1689999999999 9999999888888765 4
Q ss_pred ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-------------------CCcceEEEE------------
Q 019326 131 KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-------------------GKEASLIKF------------ 179 (343)
Q Consensus 131 ~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------------------~~~~~~~~~------------ 179 (343)
..|.+++|+|++++|++++.||.|++||+++++.+..... ...|..++|
T Consensus 212 ~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll 291 (902)
T 2oaj_A 212 PKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLL 291 (902)
T ss_dssp CCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEE
T ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEE
Confidence 6799999999999999999999999999977654321000 011222222
Q ss_pred --------------------------------------------------------------------------------
Q 019326 180 -------------------------------------------------------------------------------- 179 (343)
Q Consensus 180 -------------------------------------------------------------------------------- 179 (343)
T Consensus 292 ~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s 371 (902)
T 2oaj_A 292 ISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLIL 371 (902)
T ss_dssp EEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEE
T ss_pred EeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEc
Confidence
Q ss_pred ------------------------------------------------------------------------eCCCCEEE
Q 019326 180 ------------------------------------------------------------------------DGSGEKFF 187 (343)
Q Consensus 180 ------------------------------------------------------------------------~~~~~~~~ 187 (343)
+|+++.++
T Consensus 372 ~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~la 451 (902)
T 2oaj_A 372 GNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFI 451 (902)
T ss_dssp TTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEE
T ss_pred CCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEE
Confidence 23344455
Q ss_pred EE-eCCcEEEEEcccceeE----EE--e------cCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCc----------
Q 019326 188 MV-TEEKVGIHQAEDAKLL----CE--L------DGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGK---------- 243 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~~~~~----~~--~------~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~---------- 243 (343)
++ .|+.|++||+.++... .. + .|...|.+++|+ ++++|++|+.||+|++||+.+++
T Consensus 452 Sgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~ 531 (902)
T 2oaj_A 452 TGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPES 531 (902)
T ss_dssp EEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------
T ss_pred EecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCC
Confidence 55 5666666665554311 00 0 345679999999 46799999999999999987652
Q ss_pred -----------------------------------eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEE
Q 019326 244 -----------------------------------VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICV 288 (343)
Q Consensus 244 -----------------------------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~v 288 (343)
++..+. +|...|++++|+|++ +||+|+.|++|+|
T Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~-~h~~~V~svafSpdG----------~lAsgs~D~tv~l 600 (902)
T 2oaj_A 532 GDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVH-ANKGKTSAINNSNIG----------FVGIAYAAGSLML 600 (902)
T ss_dssp ------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEEC-CCSCSEEEEEECBTS----------EEEEEETTSEEEE
T ss_pred cccceeeeeccccCCccccccccccCCCCCCCccceeEEEE-cCCCcEEEEEecCCc----------EEEEEeCCCcEEE
Confidence 356677 899999999998876 8999999999999
Q ss_pred EeccCccccCCCccccc--ccccceeEEEcC-----CCC---ceeccccCCCCCCCccc
Q 019326 289 WDVRMAIKEKPLPLAEA--KTNSRLTCLAGS-----STK---SFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 289 wd~~~~~~~~~~~~~~~--~~~~~i~~~~~s-----~~~---~~~~~~~~~~~~~~~~~ 337 (343)
||++++.......+... .+...|++++|+ ||+ ++++.+..|+.++.++.
T Consensus 601 wd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 601 IDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 99987642211111122 456679999999 885 89999999998887765
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.9e-38 Score=292.00 Aligned_cols=277 Identities=14% Similarity=0.174 Sum_probs=241.3
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
+.....+.+|.+.|++++|+ +.+|++++.||.|++||+.+++.+..+..| ...|.+++|+|++ ++|++++.|
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~~-----~~l~~~~~d 76 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVT-ETPVRAGKFIARK-----NWIIVGSDD 76 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEEEGGG-----TEEEEEETT
T ss_pred cccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecC-CCcEEEEEEeCCC-----CEEEEEeCC
Confidence 34556778999999999999 899999999999999999999999999999 9999999999999 899999999
Q ss_pred CeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCce-eEEE-EcCCcceEEEEeC-CCCEE
Q 019326 110 GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR-SFYH-KIGKEASLIKFDG-SGEKF 186 (343)
Q Consensus 110 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~-~~~~~~~~~~~~~-~~~~~ 186 (343)
|.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||++++.. .... .+...+.+++|+| ++..+
T Consensus 77 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 156 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (814)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEE
Confidence 9999999999999999999999999999999999999999999999999998743 3333 3567899999999 78888
Q ss_pred EEE-eCCcEEEEEcccceeEEEec--CCcceEEeeecC---CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEE
Q 019326 187 FMV-TEEKVGIHQAEDAKLLCELD--GKKRILCAAPGE---NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIV 260 (343)
Q Consensus 187 ~~~-~~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~ 260 (343)
+++ .++.|++||+.+++....+. +...+.+++|++ +.++++++.||.|++||+.+++.+..+. +|...|.+++
T Consensus 157 ~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~v~~~~ 235 (814)
T 3mkq_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE-GHMSNVSFAV 235 (814)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE-CCSSCEEEEE
T ss_pred EEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc-CCCCCEEEEE
Confidence 888 89999999999887776665 347899999984 5799999999999999999999999998 9999999999
Q ss_pred EEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCc--eeccccC
Q 019326 261 VLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKS--FKRPQIG 328 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~~~~~~~ 328 (343)
|+|++. +|++++.||.|++||+.++...... ......+.+++++|++. +++.+..
T Consensus 236 ~~~~~~---------~l~~~~~dg~v~vwd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~ 292 (814)
T 3mkq_A 236 FHPTLP---------IIISGSEDGTLKIWNSSTYKVEKTL----NVGLERSWCIATHPTGRKNYIASGFD 292 (814)
T ss_dssp ECSSSS---------EEEEEETTSCEEEEETTTCSEEEEE----CCSSSSEEEEEECTTCGGGEEEEEET
T ss_pred EcCCCC---------EEEEEeCCCeEEEEECCCCcEEEEe----ecCCCcEEEEEEccCCCceEEEEEeC
Confidence 999988 9999999999999999876422211 12345799999999987 3444443
No 81
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-38 Score=273.32 Aligned_cols=286 Identities=12% Similarity=0.113 Sum_probs=230.3
Q ss_pred eEEeEEe-cCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCC---Ce---eeeEeccCCCCCeEEEEEeCCCCCCCCc
Q 019326 32 LTQLFSY-PAHLSPITTVAVS---GTAAASGGTDDTIHLYDLST---SS---SLGAIHHHESSSVTSLAFYTPQNLSVPR 101 (343)
Q Consensus 32 ~~~~~~~-~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~---~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~~ 101 (343)
.+.+..+ .+|.++|++++|+ +++|++|+.||.|++||+.+ +. ....+ .| ...|.+++|+|++ +
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h-~~~v~~~~~~~~~-----~ 124 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DC-SSTVTQITMIPNF-----D 124 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-EC-SSCEEEEEECTTS-----S
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cC-CCCEEEEEEeCCC-----C
Confidence 3556677 8899999999998 57999999999999999987 43 22233 46 8999999999988 7
Q ss_pred eEEEeeCCCeEEEEECC---Ccceeeeeee------------ccccEEEEE--EecCCCEEEEEeCCCeEEEEEccCCce
Q 019326 102 NLFSTSADGFVSIFDAD---PFVLLTSVKV------------HKKGVNDLA--VHHSGKLALTVGRDDCLAMVNLVRGRR 164 (343)
Q Consensus 102 ~l~s~~~dg~i~iwd~~---~~~~~~~~~~------------~~~~v~~i~--~~~~~~~l~~~~~d~~i~~wd~~~~~~ 164 (343)
+|++|+.||+|++||+. +++....+.. +...+.++. +++++.+|++++.|+.|++||+++++.
T Consensus 125 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 204 (437)
T 3gre_A 125 AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER 204 (437)
T ss_dssp EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Confidence 99999999999999994 5555544443 334555555 557889999999999999999999998
Q ss_pred eEEEE---cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEe--cCCcceEEeeec----C-CCeEEEEeCCCc
Q 019326 165 SFYHK---IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCEL--DGKKRILCAAPG----E-NGVLFTGGEDRS 233 (343)
Q Consensus 165 ~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~--~~~~~i~~~~~~----~-~~~l~~~~~dg~ 233 (343)
+.... +...+.+++|+|++++++++ .|+.|++||+++++.+..+ .+..+|.+++++ + +.+|++|+.||.
T Consensus 205 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~ 284 (437)
T 3gre_A 205 LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF 284 (437)
T ss_dssp EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE
T ss_pred eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc
Confidence 77766 45889999999999999999 8999999999999998877 477899999665 2 458999999999
Q ss_pred EEEEECCCCceeEEeccc--------------------------ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEE
Q 019326 234 ITAWDTNSGKVAYCIEDA--------------------------HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVIC 287 (343)
Q Consensus 234 i~i~d~~~~~~~~~~~~~--------------------------h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~ 287 (343)
|++||+++++.+..+. + |...|++++|+ ++. +|++++.||.|+
T Consensus 285 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~---------~l~s~~~d~~i~ 353 (437)
T 3gre_A 285 LTIWNFVKGHCQYAFI-NSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK---------ILLTDEATSSIV 353 (437)
T ss_dssp EEEEETTTTEEEEEEE-SSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE---------EEEEEGGGTEEE
T ss_pred EEEEEcCCCcEEEEEE-cCCCCCccceecccccccccceecccccCCceEEEEEC-Cce---------EEEecCCCCeEE
Confidence 9999999999887776 3 56668888888 544 999999999999
Q ss_pred EEeccCccccCCCccc---------------------------------ccccccceeEEEcCCC--CceeccccCCCCC
Q 019326 288 VWDVRMAIKEKPLPLA---------------------------------EAKTNSRLTCLAGSST--KSFKRPQIGDSAP 332 (343)
Q Consensus 288 vwd~~~~~~~~~~~~~---------------------------------~~~~~~~i~~~~~s~~--~~~~~~~~~~~~~ 332 (343)
+||+.++.......-. ...+...|++++++++ +.+++.+..++.+
T Consensus 354 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I 433 (437)
T 3gre_A 354 MFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLI 433 (437)
T ss_dssp EEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCE
T ss_pred EEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceE
Confidence 9999987533211100 0115677999999988 8899999999987
Q ss_pred CCc
Q 019326 333 KGE 335 (343)
Q Consensus 333 ~~~ 335 (343)
+.+
T Consensus 434 ~iw 436 (437)
T 3gre_A 434 GIF 436 (437)
T ss_dssp EEE
T ss_pred EEe
Confidence 643
No 82
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.3e-37 Score=262.17 Aligned_cols=243 Identities=18% Similarity=0.225 Sum_probs=209.3
Q ss_pred EecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC----eeeeEeccCCCCCeEEEEEeC--CCCCCCCceEEEeeC
Q 019326 37 SYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS----SSLGAIHHHESSSVTSLAFYT--PQNLSVPRNLFSTSA 108 (343)
Q Consensus 37 ~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~l~~~~--~~~~~~~~~l~s~~~ 108 (343)
.+.+|.++|++++|+ +++|++|+.||.|++||+.++ +....+..| ...|.+++|+| ++ ++|++++.
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~d~-----~~l~s~~~ 79 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH-DSSIVAIDWASPEYG-----RIIASASY 79 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC-SSCEEEEEECCGGGC-----SEEEEEET
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccC-CCcEEEEEEcCCCCC-----CEEEEEcC
Confidence 446899999999998 889999999999999999976 466777888 99999999999 46 79999999
Q ss_pred CCeEEEEECCCc---------ceeeeeeeccccEEEEEEecC--CCEEEEEeCCCeEEEEEccCCceeEEE---------
Q 019326 109 DGFVSIFDADPF---------VLLTSVKVHKKGVNDLAVHHS--GKLALTVGRDDCLAMVNLVRGRRSFYH--------- 168 (343)
Q Consensus 109 dg~i~iwd~~~~---------~~~~~~~~~~~~v~~i~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~--------- 168 (343)
||.|++||++++ +.+..+..|...|.+++|+|+ +.+|++++.||.|++||+++++.+...
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 999999999876 557788889999999999999 999999999999999999987744322
Q ss_pred -----EcCCcceEEEEeCC---CCEEEEE-eCCcEEEEEccccee--EEEec-CCcceEEeeecCC-----CeEEEEeCC
Q 019326 169 -----KIGKEASLIKFDGS---GEKFFMV-TEEKVGIHQAEDAKL--LCELD-GKKRILCAAPGEN-----GVLFTGGED 231 (343)
Q Consensus 169 -----~~~~~~~~~~~~~~---~~~~~~~-~~~~i~~~d~~~~~~--~~~~~-~~~~i~~~~~~~~-----~~l~~~~~d 231 (343)
.....+.+++|+|+ +..++++ .++.+.+|+...++. ...+. |...|.+++|++. ++|++|+.|
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred ccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 23456889999997 8888888 788887777776664 44444 7889999999965 689999999
Q ss_pred CcEEEEECCCC----------------------------------------------ceeEEecccccccEEEEEEEecC
Q 019326 232 RSITAWDTNSG----------------------------------------------KVAYCIEDAHSARVKGIVVLTKN 265 (343)
Q Consensus 232 g~i~i~d~~~~----------------------------------------------~~~~~~~~~h~~~v~~~~~~~~~ 265 (343)
|.|++||++++ +.+..+. +|...|++++|+|++
T Consensus 240 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~ 318 (351)
T 3f3f_A 240 GRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD-DHNGEVWSVSWNLTG 318 (351)
T ss_dssp SCEEEEEEEECC---------------------------------------CCSEEEEEEEEEC-TTSSCEEEEEECSSS
T ss_pred CeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEe-cccccEEEEEEcCCC
Confidence 99999999865 5666677 899999999999988
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 266 DGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 266 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
. +|++++.||.|++||+.++.
T Consensus 319 ~---------~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 319 T---------ILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp C---------CEEEEETTSCEEEEEECTTS
T ss_pred C---------EEEEecCCCcEEEEecCcCc
Confidence 7 99999999999999999764
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.3e-37 Score=265.17 Aligned_cols=283 Identities=14% Similarity=0.168 Sum_probs=238.0
Q ss_pred EecCCCCC--eEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 37 SYPAHLSP--ITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 37 ~~~~h~~~--v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
...+|... +.+++|+++.+++++.|+.|++||+.+++....+...+...|.+++|+|++ ++|++|+.||.|++
T Consensus 86 ~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~-----~~l~~~~~dg~i~i 160 (401)
T 4aez_A 86 DAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDG-----SFLSVGLGNGLVDI 160 (401)
T ss_dssp ECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTS-----SEEEEEETTSCEEE
T ss_pred eCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCC-----CEEEEECCCCeEEE
Confidence 33455544 556788878889999999999999999998888876338999999999998 89999999999999
Q ss_pred EECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCC-ceeE-EEEcCCcceEEEEeCCCCEEEEE-eC
Q 019326 115 FDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG-RRSF-YHKIGKEASLIKFDGSGEKFFMV-TE 191 (343)
Q Consensus 115 wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~ 191 (343)
||+.+++.+..+.+|...|.+++|+ ++++++++.||.|++||++.. .... ...+...+.+++|+|++.+++++ .|
T Consensus 161 wd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 238 (401)
T 4aez_A 161 YDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND 238 (401)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC
Confidence 9999999999999999999999995 569999999999999999844 3333 33456889999999999999999 89
Q ss_pred CcEEEEEcccceeEEEec-CCcceEEeeecC-C-CeEEEEe--CCCcEEEEECCCCceeEEecccccccEEEEEEEecCC
Q 019326 192 EKVGIHQAEDAKLLCELD-GKKRILCAAPGE-N-GVLFTGG--EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 192 ~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~-~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
+.|++||+++++....+. |...+.+++|++ + .++++++ .|+.|++||+.+++.+..+. |...|.+++|++++.
T Consensus 239 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 239 NVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD--AGSQVTSLIWSPHSK 316 (401)
T ss_dssp SCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSS
T ss_pred CeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEEECCCCC
Confidence 999999999999888876 888999999985 3 4666655 79999999999999998887 778999999999987
Q ss_pred CCCCCCCCeEEEE--EcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 267 GGSTAENPYLVAS--ASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 267 ~~~~~~~~~~l~s--~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
++++ |+.||.|++||+.++....... ...+...|.+++|+|++.+++.+..|+.++.++...
T Consensus 317 ---------~l~~~~g~~dg~i~v~~~~~~~~~~~~~--~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 317 ---------EIMSTHGFPDNNLSIWSYSSSGLTKQVD--IPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp ---------EEEEEECTTTCEEEEEEEETTEEEEEEE--EECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred ---------eEEEEeecCCCcEEEEecCCccceeEEE--ecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 8888 5589999999999864222111 123456799999999999999999999777666543
No 84
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=265.05 Aligned_cols=276 Identities=14% Similarity=0.126 Sum_probs=224.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeE-----EecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLF-----SYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSS 73 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~ 73 (343)
.|++|+.||.|++||+...... ......... ...+|..+|++++|+ +.+|++++.||.|++||+.+++
T Consensus 58 ~l~~~~~dg~i~iw~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 133 (408)
T 4a11_B 58 YMLSGGSDGVIVLYDLENSSRQ----SYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ 133 (408)
T ss_dssp EEEEEETTSCEEEEECCCCSSS----SCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE
T ss_pred EEEEEcCCCeEEEEECCCCccc----ceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc
Confidence 4899999999999999873211 111111111 113699999999997 5689999999999999999999
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCC-EEEEEeCCC
Q 019326 74 SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGK-LALTVGRDD 152 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~~~d~ 152 (343)
....+. + ...+.++.+++.+ ....++++++.|+.|++||+++++.+..+..|...|.+++|+|++. ++++++.||
T Consensus 134 ~~~~~~-~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg 209 (408)
T 4a11_B 134 TADVFN-F-EETVYSHHMSPVS--TKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADS 209 (408)
T ss_dssp EEEEEE-C-SSCEEEEEECSSC--SSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTS
T ss_pred cceecc-C-CCceeeeEeecCC--CCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCC
Confidence 888887 4 5889999999865 1125899999999999999999999999999999999999999998 589999999
Q ss_pred eEEEEEccCCcee-EE----------------EEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecC----
Q 019326 153 CLAMVNLVRGRRS-FY----------------HKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG---- 210 (343)
Q Consensus 153 ~i~~wd~~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~---- 210 (343)
.|++||++++... .. ..+...+.+++|+|++++++++ .++.+++||+.+++....+..
T Consensus 210 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 289 (408)
T 4a11_B 210 RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCN 289 (408)
T ss_dssp CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCC
T ss_pred cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccc
Confidence 9999999877522 22 2345678999999999999999 899999999998876554431
Q ss_pred ---CcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEE
Q 019326 211 ---KKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVIC 287 (343)
Q Consensus 211 ---~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~ 287 (343)
..............+++++.++.|++||+.+++.+..+. +|...|++++|+|++. +|++++.||.|+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~---------~l~s~~~dg~i~ 359 (408)
T 4a11_B 290 NSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK-GHYKTVDCCVFQSNFQ---------ELYSGSRDCNIL 359 (408)
T ss_dssp CCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC-CCSSCEEEEEEETTTT---------EEEEEETTSCEE
T ss_pred cccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec-cCCCeEEEEEEcCCCC---------EEEEECCCCeEE
Confidence 111222223345678888889999999999999999999 9999999999999987 999999999999
Q ss_pred EEeccCcc
Q 019326 288 VWDVRMAI 295 (343)
Q Consensus 288 vwd~~~~~ 295 (343)
+||+++.+
T Consensus 360 iw~~~~~~ 367 (408)
T 4a11_B 360 AWVPSLYE 367 (408)
T ss_dssp EEEECC--
T ss_pred EEeCCCCC
Confidence 99999875
No 85
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.2e-39 Score=274.76 Aligned_cols=237 Identities=10% Similarity=0.071 Sum_probs=199.0
Q ss_pred cCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC--eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 39 PAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS--SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 39 ~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
..|.++|++++|+ +++|++|+.|+.|++||+.++ +.+..+.+| ...|.+++|+|++ ++|++++.|++|++
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~-----~~l~s~s~d~~v~v 81 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDH-DKIVTCVDWAPKS-----NRIVTCSQDRNAYV 81 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCC-SSCEEEEEECTTT-----CCEEEEETTSSEEE
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecC-CceEEEEEEeCCC-----CEEEEEeCCCeEEE
Confidence 3467899999999 889999999999999999988 788888889 9999999999998 79999999999999
Q ss_pred EECCCcc---eeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCce---eEEEE--cCCcceEEEEeCCCCEE
Q 019326 115 FDADPFV---LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR---SFYHK--IGKEASLIKFDGSGEKF 186 (343)
Q Consensus 115 wd~~~~~---~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~ 186 (343)
||+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+++++. ..... +...+.+++|+|+++++
T Consensus 82 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp C------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEE
T ss_pred EEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEE
Confidence 9998876 6677778999999999999999999999999999999998863 33333 56789999999999999
Q ss_pred EEE-eCCcEEEEEcc------------------cceeEEEecCCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCce--
Q 019326 187 FMV-TEEKVGIHQAE------------------DAKLLCELDGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKV-- 244 (343)
Q Consensus 187 ~~~-~~~~i~~~d~~------------------~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~-- 244 (343)
+++ .|+.+++||+. .++.+..+.|...|.+++|++ +++|++++.||.|++||+.+++.
T Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~ 241 (377)
T 3dwl_C 162 AAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP 241 (377)
T ss_dssp EEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCE
T ss_pred EEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 999 89999999985 355666667888999999994 67999999999999999999987
Q ss_pred --eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 245 --AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 245 --~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+..+. +|..+|.+++|+|++. +|++++.|+.+ +|+..
T Consensus 242 ~~~~~~~-~~~~~v~~~~~s~~~~---------~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 242 RALITVK-LSQLPLRSLLWANESA---------IVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EECCCEE-CSSSCEEEEEEEETTE---------EEEEESSSSEE-EECCC
T ss_pred eeeEeec-CCCCceEEEEEcCCCC---------EEEEEcCCcEE-EEEeC
Confidence 77777 8999999999999987 88888766655 77665
No 86
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.8e-37 Score=268.43 Aligned_cols=276 Identities=18% Similarity=0.275 Sum_probs=234.1
Q ss_pred EEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEE
Q 019326 36 FSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIF 115 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 115 (343)
....+|...|+++++++++|++|+.||.|++||+.+++.+..+.+| ...|.+++| ++ ++|++|+.||+|++|
T Consensus 127 ~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~--~~-----~~l~sg~~dg~i~vw 198 (435)
T 1p22_A 127 HCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGH-TGSVLCLQY--DE-----RVIITGSSDSTVRVW 198 (435)
T ss_dssp ECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCC-SSCEEEEEC--CS-----SEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCC-CCcEEEEEE--CC-----CEEEEEcCCCeEEEE
Confidence 3334677889999999999999999999999999999999999999 999999999 44 699999999999999
Q ss_pred ECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeE----EEEcCCcceEEEEeCCCCEEEEE-e
Q 019326 116 DADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF----YHKIGKEASLIKFDGSGEKFFMV-T 190 (343)
Q Consensus 116 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~ 190 (343)
|+.+++.+..+.+|...|.+++|++ ..+++++.||.|++||++++.... ...+...+.++++ ++++++++ .
T Consensus 199 d~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~ 274 (435)
T 1p22_A 199 DVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASG 274 (435)
T ss_dssp ESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEET
T ss_pred ECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeC
Confidence 9999999999999999999999975 499999999999999999877542 2234467777887 77888888 8
Q ss_pred CCcEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCC
Q 019326 191 EEKVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGS 269 (343)
Q Consensus 191 ~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 269 (343)
|+.|++||+++++.+..+. |...+.++.+ +++++++|+.||.|++||+++++.+..+. +|...|.++++ ++.
T Consensus 275 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~--~~~--- 347 (435)
T 1p22_A 275 DRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLE-GHEELVRCIRF--DNK--- 347 (435)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEE-ETTEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEC--CSS---
T ss_pred CCeEEEEECCcCcEEEEEcCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCCCCEEEEEe-CCcCcEEEEEe--cCC---
Confidence 9999999999999998887 7888999999 57899999999999999999999999999 99999999998 344
Q ss_pred CCCCCeEEEEEcCCCcEEEEeccCccccCCC----ccc-ccccccceeEEEcCCCCceeccccCCCCCCCcccc
Q 019326 270 TAENPYLVASASSDGVICVWDVRMAIKEKPL----PLA-EAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 270 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~----~~~-~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
+|++|+.||.|++||+.++...... .+. ...+...|.++++ ++.+++.+..|+.++.++..
T Consensus 348 ------~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 348 ------RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp ------EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--
T ss_pred ------EEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECC
Confidence 9999999999999999876421110 111 1245567999998 67788888888877666543
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.1e-37 Score=262.40 Aligned_cols=274 Identities=12% Similarity=0.109 Sum_probs=231.1
Q ss_pred ecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe---eeeEeccCCCCCeEEEEEeCCCCCCCCc-eEEEeeCCCe
Q 019326 38 YPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS---SLGAIHHHESSSVTSLAFYTPQNLSVPR-NLFSTSADGF 111 (343)
Q Consensus 38 ~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~l~s~~~dg~ 111 (343)
..+|.+.|++++|+ +++|++++.||.|++|++.+++ ....+..| ...|.+++|+|++ + +|++|+.||.
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~-----~~~l~~~~~dg~ 80 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY-KHPLLCCNFIDNT-----DLQIYVGTVQGE 80 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC-SSCEEEEEEEESS-----SEEEEEEETTSC
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeec-CCceEEEEECCCC-----CcEEEEEcCCCe
Confidence 35899999999998 7899999999999999999876 34455577 8999999999998 8 8999999999
Q ss_pred EEEEEC-CCcceeeeeee--ccccEEEEEEecCCCEEEEEeCCCeEEEEEccC---------CceeEEEEcCCcceEEEE
Q 019326 112 VSIFDA-DPFVLLTSVKV--HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR---------GRRSFYHKIGKEASLIKF 179 (343)
Q Consensus 112 i~iwd~-~~~~~~~~~~~--~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~---------~~~~~~~~~~~~~~~~~~ 179 (343)
|++||+ .+++. ..+.. |...|.+++|+| ++++++++.|+.|++||+++ ++.+....+...+.+++|
T Consensus 81 i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 158 (342)
T 1yfq_A 81 ILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158 (342)
T ss_dssp EEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred EEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEe
Confidence 999999 77654 77788 999999999999 99999999999999999988 666555567788999999
Q ss_pred eCCCCEEEEE-eCCcEEEEEccc-ceeE---EEecCCcceEEeeecC--CCeEEEEeCCCcEEEEECCCC------ceeE
Q 019326 180 DGSGEKFFMV-TEEKVGIHQAED-AKLL---CELDGKKRILCAAPGE--NGVLFTGGEDRSITAWDTNSG------KVAY 246 (343)
Q Consensus 180 ~~~~~~~~~~-~~~~i~~~d~~~-~~~~---~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~------~~~~ 246 (343)
+|++ ++++ .++.|++||+++ +... ....+...+.++++++ ++++++++.||.|++|+++.. +...
T Consensus 159 ~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 236 (342)
T 1yfq_A 159 NSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236 (342)
T ss_dssp CSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE
T ss_pred cCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccce
Confidence 9988 6666 899999999998 5432 3334788999999986 679999999999999999887 7777
Q ss_pred Eecccccc---------cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcC
Q 019326 247 CIEDAHSA---------RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGS 317 (343)
Q Consensus 247 ~~~~~h~~---------~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s 317 (343)
.+. .|.. .|.+++|+|++. +|++++.||.|++||+.++...... ..++...|.+++
T Consensus 237 ~~~-~~~~~~~~~~~~~~i~~~~~s~~~~---------~l~~~~~dg~i~vwd~~~~~~~~~~---~~~h~~~v~~~~-- 301 (342)
T 1yfq_A 237 AFR-CHRLNLKDTNLAYPVNSIEFSPRHK---------FLYTAGSDGIISCWNLQTRKKIKNF---AKFNEDSVVKIA-- 301 (342)
T ss_dssp EEE-CCCCCTTCCSSCCCEEEEEECTTTC---------CEEEEETTSCEEEEETTTTEEEEEC---CCCSSSEEEEEE--
T ss_pred eee-cccccccccccceeEEEEEEcCCCC---------EEEEecCCceEEEEcCccHhHhhhh---hcccCCCceEec--
Confidence 887 7755 999999999887 9999999999999999987532221 122256799999
Q ss_pred CCCceeccccCCCC-CCCcc
Q 019326 318 STKSFKRPQIGDSA-PKGEE 336 (343)
Q Consensus 318 ~~~~~~~~~~~~~~-~~~~~ 336 (343)
+++.+++.+..|+. .+..+
T Consensus 302 ~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 302 CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp ECSSEEEEEEECTHHHHCSS
T ss_pred CCCCeEEEEecCCccccccc
Confidence 99999999999987 44444
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.1e-36 Score=275.81 Aligned_cols=295 Identities=17% Similarity=0.191 Sum_probs=242.6
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCC-eEEEEecC----ceEEEeeCCCeEEEEEcCCC-----
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSP-ITTVAVSG----TAAASGGTDDTIHLYDLSTS----- 72 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~~~----~~l~s~~~dg~i~iwd~~~~----- 72 (343)
|++++ ++.|++|++.+.. ........+.+|... |++++|+. ++|++|+.||.|++||+.++
T Consensus 33 l~~~~-~~~v~v~~~~~~~--------~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~ 103 (615)
T 1pgu_A 33 IAYPC-GKSAFVRCLDDGD--------SKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNS 103 (615)
T ss_dssp EEEEE-TTEEEEEECCSSC--------CSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTE
T ss_pred EEEec-CCeEEEEECCCCC--------CccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccccc
Confidence 55555 8999999998620 011456677899999 99999974 79999999999999999754
Q ss_pred ---eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC----CeEEEEECCCcceeeeeeeccccEEEEEEecCCC-E
Q 019326 73 ---SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD----GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGK-L 144 (343)
Q Consensus 73 ---~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~-~ 144 (343)
+....+..| ...|.+++|+|++ ++|++++.+ +.|++|| .++.+..+.+|...|.+++|+|++. .
T Consensus 104 ~~~~~~~~~~~~-~~~v~~~~~s~~~-----~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (615)
T 1pgu_A 104 VEVNVKSEFQVL-AGPISDISWDFEG-----RRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMR 175 (615)
T ss_dssp EEEEEEEEEECC-SSCEEEEEECTTS-----SEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCE
T ss_pred ccccccchhhcc-cccEEEEEEeCCC-----CEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcE
Confidence 677788888 8999999999999 799999987 6888888 5678888999999999999999997 8
Q ss_pred EEEEeCCCeEEEEEccCCceeEEEE-cCC---cceEEEEeCC-CCEEEEE-eCCcEEEEEcccceeEEEe-----cCCcc
Q 019326 145 ALTVGRDDCLAMVNLVRGRRSFYHK-IGK---EASLIKFDGS-GEKFFMV-TEEKVGIHQAEDAKLLCEL-----DGKKR 213 (343)
Q Consensus 145 l~~~~~d~~i~~wd~~~~~~~~~~~-~~~---~~~~~~~~~~-~~~~~~~-~~~~i~~~d~~~~~~~~~~-----~~~~~ 213 (343)
+++++.|+.|++||+.+++...... +.. .+.+++|+|+ +++++++ .++.|++||+++++.+..+ .|...
T Consensus 176 l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 255 (615)
T 1pgu_A 176 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG 255 (615)
T ss_dssp EEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSC
T ss_pred EEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCc
Confidence 9999999999999999988776665 345 7999999999 9999998 8999999999999999998 78899
Q ss_pred eEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccc----cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 214 ILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAH----SARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 214 i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
|.+++|+++.++++++.||.|++||+++++.+..+. .+ ...+.++.+. ++. ++++++.||.|++|
T Consensus 256 v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~---------~l~~~~~~g~i~~~ 324 (615)
T 1pgu_A 256 IFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT-LDKQQLGNQQVGVVAT-GNG---------RIISLSLDGTLNFY 324 (615)
T ss_dssp EEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEE-CCTTCGGGCEEEEEEE-ETT---------EEEEEETTSCEEEE
T ss_pred eEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEc-CCCCcccCceeEEEeC-CCC---------eEEEEECCCCEEEE
Confidence 999999966799999999999999999999988887 54 4778888886 555 99999999999999
Q ss_pred eccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCC
Q 019326 290 DVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPK 333 (343)
Q Consensus 290 d~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~ 333 (343)
|+.++...... ..+...|.++++ |+ ++.+..++.++
T Consensus 325 d~~~~~~~~~~----~~~~~~v~~~~~-~~---l~~~~~dg~i~ 360 (615)
T 1pgu_A 325 ELGHDEVLKTI----SGHNKGITALTV-NP---LISGSYDGRIM 360 (615)
T ss_dssp ETTEEEEEEEE----CCCSSCEEEEET-TT---TEEEETTSCEE
T ss_pred ECCCCcEEEEE----eCCCCCEEEEEe-cC---cEEECCCCeEE
Confidence 99875422111 123345666666 55 44444444443
No 89
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-38 Score=275.57 Aligned_cols=271 Identities=13% Similarity=0.113 Sum_probs=226.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCe-----
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSS----- 73 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~----- 73 (343)
.|++|+.||.|++|++.... ........+.+|..+|++++|+ +++|++++.||.|++||+.+++
T Consensus 81 ~l~~~~~dg~v~vw~~~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 152 (416)
T 2pm9_A 81 IIAGALDNGSLELYSTNEAN--------NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN 152 (416)
T ss_dssp CEEEEESSSCEEEECCSSTT--------SCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT
T ss_pred eEEEEccCCeEEEeeccccc--------ccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc
Confidence 47899999999999997521 1123567778999999999998 6799999999999999999886
Q ss_pred -eeeE---eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeec------cccEEEEEEecCC-
Q 019326 74 -SLGA---IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVH------KKGVNDLAVHHSG- 142 (343)
Q Consensus 74 -~~~~---~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~~v~~i~~~~~~- 142 (343)
.... +..| ...|.+++|+|++ +.+|++++.||.|++||+++++.+..+..+ ...|.+++|+|++
T Consensus 153 ~~~~~~~~~~~~-~~~v~~~~~~~~~----~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 227 (416)
T 2pm9_A 153 YTPLTPGQSMSS-VDEVISLAWNQSL----AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNS 227 (416)
T ss_dssp CCCBCCCCSCCS-SCCCCEEEECSSC----TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCT
T ss_pred ccccccccccCC-CCCeeEEEeCCCC----CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCC
Confidence 3333 3567 8899999999994 179999999999999999999998888876 7899999999997
Q ss_pred CEEEEEeCCC---eEEEEEccCC-ceeEEEE--cCCcceEEEEeC-CCCEEEEE-eCCcEEEEEcccceeEEEec-CCcc
Q 019326 143 KLALTVGRDD---CLAMVNLVRG-RRSFYHK--IGKEASLIKFDG-SGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKR 213 (343)
Q Consensus 143 ~~l~~~~~d~---~i~~wd~~~~-~~~~~~~--~~~~~~~~~~~~-~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~ 213 (343)
.++++++.|+ .|++||++++ ....... +...+.+++|+| ++.+++++ .|+.|++||+++++.+..+. |...
T Consensus 228 ~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~ 307 (416)
T 2pm9_A 228 TRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW 307 (416)
T ss_dssp TEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC
T ss_pred CEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc
Confidence 6899999998 9999999986 4444443 667899999999 89999999 89999999999999988887 7888
Q ss_pred eEEeeecC-C-CeEEEEeCCCcEEEEECCCCceeEEec----------------------------------ccccccEE
Q 019326 214 ILCAAPGE-N-GVLFTGGEDRSITAWDTNSGKVAYCIE----------------------------------DAHSARVK 257 (343)
Q Consensus 214 i~~~~~~~-~-~~l~~~~~dg~i~i~d~~~~~~~~~~~----------------------------------~~h~~~v~ 257 (343)
+.+++|++ + .++++++.||.|++||+.++....... ..|..++.
T Consensus 308 v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (416)
T 2pm9_A 308 CFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSP 387 (416)
T ss_dssp CCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSC
T ss_pred eEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCcc
Confidence 99999995 4 699999999999999998765332211 01566777
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 258 GIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
+++|++++. +|++++.||.|+||++.+.
T Consensus 388 ~~~~s~dg~---------~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 388 AAHWAFGGK---------LVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CCEEETTTE---------EECBCTTSSCBCCBCCCCC
T ss_pred ceEEeeCCe---------EEEEeCCCCeEEEEEeccC
Confidence 888888876 9999999999999999863
No 90
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=269.15 Aligned_cols=274 Identities=11% Similarity=0.149 Sum_probs=219.8
Q ss_pred CCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe-----------eeeEeccCCC------------CCeEEEEEeCCC
Q 019326 41 HLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS-----------SLGAIHHHES------------SSVTSLAFYTPQ 95 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~~------------~~v~~l~~~~~~ 95 (343)
|.+.|++++|+ +++|++|+.||.|++||+.+++ ....+.+| . ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h-~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSH-EPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECC-CCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccc-cccccccccccccCceEEEEEcCCC
Confidence 67899999999 8999999999999999999876 57788888 7 889999999986
Q ss_pred CCCCCceEEEeeCCCeEEEEECCCccee---------------------------------------ee-eeeccccEEE
Q 019326 96 NLSVPRNLFSTSADGFVSIFDADPFVLL---------------------------------------TS-VKVHKKGVND 135 (343)
Q Consensus 96 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~ 135 (343)
+ ...|++++.|++|++||+.+++.. .. ..+|...|.+
T Consensus 106 ~---~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 106 N---AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp S---SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred C---cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 2 148999999999999998764432 12 3579999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEccCCc-eeEEE--------EcCCcceEEEEeCCC-CEEEEE-eCCcEEEEEccccee
Q 019326 136 LAVHHSGKLALTVGRDDCLAMVNLVRGR-RSFYH--------KIGKEASLIKFDGSG-EKFFMV-TEEKVGIHQAEDAKL 204 (343)
Q Consensus 136 i~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~--------~~~~~~~~~~~~~~~-~~~~~~-~~~~i~~~d~~~~~~ 204 (343)
++|+|++++|+++ .|+.|++||+++.. ..... .+...+.+++|+|++ ++++++ .|+.|++||+++++.
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 9999999999998 79999999998443 33322 345679999999998 899988 899999999999886
Q ss_pred ----EEEecC-Cc------------ceEEeeecC-CCeEEEEeCCCcEEEEECCC-CceeEEeccccccc----------
Q 019326 205 ----LCELDG-KK------------RILCAAPGE-NGVLFTGGEDRSITAWDTNS-GKVAYCIEDAHSAR---------- 255 (343)
Q Consensus 205 ----~~~~~~-~~------------~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~h~~~---------- 255 (343)
...+.. .. .|.+++|++ +.+|++++. +.|++||+++ ++++..+. +|...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~-~~~~~~~~l~~~~~~ 339 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ-VHEYLRSKLCSLYEN 339 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE-SCGGGTTTHHHHHHT
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee-ccccccccccccccc
Confidence 666663 33 899999995 578888888 9999999997 88888887 77542
Q ss_pred -----EEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCC----------------------------Ccc
Q 019326 256 -----VKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKP----------------------------LPL 302 (343)
Q Consensus 256 -----v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~----------------------------~~~ 302 (343)
+..++|+|++. +|++++.||.|++||+.++..... ...
T Consensus 340 ~~i~~~~~~~~s~~~~---------~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (447)
T 3dw8_B 340 DCIFDKFECCWNGSDS---------VVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISV 410 (447)
T ss_dssp SGGGCCCCEEECTTSS---------EEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEG
T ss_pred cccccceEEEECCCCC---------EEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccc
Confidence 23489999887 999999999999999987642110 001
Q ss_pred cccccccceeEEEcCCCCceeccccCCC
Q 019326 303 AEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 303 ~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
........|..++|+|++.+++.+..++
T Consensus 411 ~~~~~~~~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 411 DSLDFNKKILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp GGCCTTSCCCEEEECSSSSEEEEECSSC
T ss_pred cccccCCceeEEEECCCCCEEEEEecce
Confidence 1223345789999999999999887765
No 91
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-37 Score=260.03 Aligned_cols=245 Identities=17% Similarity=0.233 Sum_probs=209.8
Q ss_pred EeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcC--CCeeeeEeccCCCCCeEEEEEeCC--CCCCCCceEEEee
Q 019326 34 QLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLS--TSSSLGAIHHHESSSVTSLAFYTP--QNLSVPRNLFSTS 107 (343)
Q Consensus 34 ~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~v~~l~~~~~--~~~~~~~~l~s~~ 107 (343)
.+..+.+|.++|++++|+ +++|++|+.||.|++||+. +++.+..+..| ...|++++|+++ + ++|++++
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~-----~~l~s~~ 76 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFG-----TILASCS 76 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGC-----SEEEEEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCC-CCcEEEEEeCCCCCC-----CEEEEec
Confidence 345667999999999999 8899999999999999998 56777888889 999999999977 6 7999999
Q ss_pred CCCeEEEEECCCcc--eeeeeeeccccEEEEEEecC--CCEEEEEeCCCeEEEEEccCCcee---EEEEcCCcceEEEEe
Q 019326 108 ADGFVSIFDADPFV--LLTSVKVHKKGVNDLAVHHS--GKLALTVGRDDCLAMVNLVRGRRS---FYHKIGKEASLIKFD 180 (343)
Q Consensus 108 ~dg~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~~~~~ 180 (343)
.||.|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++... ....+...+.+++|+
T Consensus 77 ~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~ 156 (379)
T 3jrp_A 77 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 156 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEEC
T ss_pred cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEc
Confidence 99999999998876 77778889999999999999 999999999999999999987432 333456789999999
Q ss_pred C-------------CCCEEEEE-eCCcEEEEEcccce----eEEEec-CCcceEEeeecC----CCeEEEEeCCCcEEEE
Q 019326 181 G-------------SGEKFFMV-TEEKVGIHQAEDAK----LLCELD-GKKRILCAAPGE----NGVLFTGGEDRSITAW 237 (343)
Q Consensus 181 ~-------------~~~~~~~~-~~~~i~~~d~~~~~----~~~~~~-~~~~i~~~~~~~----~~~l~~~~~dg~i~i~ 237 (343)
| ++..++++ .++.|++||++++. ....+. |...|.+++|++ +++|++++.||.|++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iw 236 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 236 (379)
T ss_dssp CCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred CccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEE
Confidence 9 68999998 89999999998764 334444 788999999995 5799999999999999
Q ss_pred ECCCCc---eeEEec-ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 238 DTNSGK---VAYCIE-DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 238 d~~~~~---~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
|++++. ....+. ..|...|.+++|+|++. +|++++.||.|++|+++.
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---------~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 237 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN---------VLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSC---------CEEEEESSSSEEEEEEEE
T ss_pred eCCCCCccceeeeeccccCCCcEEEEEEcCCCC---------EEEEecCCCcEEEEeCCC
Confidence 999874 222222 14889999999999988 999999999999999984
No 92
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2e-37 Score=266.57 Aligned_cols=268 Identities=16% Similarity=0.203 Sum_probs=222.8
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCC-------
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTS------- 72 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~------- 72 (343)
+++|+.||.|++|++.... ........+.+|.++|++++|+ +++|++|+.||.|++||+.++
T Consensus 50 ~~~~~~~g~i~v~~~~~~~--------~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~ 121 (402)
T 2aq5_A 50 ICEASGGGAFLVLPLGKTG--------RVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLR 121 (402)
T ss_dssp EBCCSSSCCEEEEETTCCE--------ECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBC
T ss_pred EEEEcCCCEEEEEECccCC--------CCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccC
Confidence 3457889999999986511 1112344567999999999997 689999999999999999988
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee--eeccccEEEEEEecCCCEEEEEeC
Q 019326 73 SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV--KVHKKGVNDLAVHHSGKLALTVGR 150 (343)
Q Consensus 73 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~~~~~ 150 (343)
+.+..+.+| ...|.+++|+|++ ..+|++++.||.|++||+.+++.+..+ ..|...|.+++|+|++++|++++.
T Consensus 122 ~~~~~~~~h-~~~v~~~~~~p~~----~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 122 EPVITLEGH-TKRVGIVAWHPTA----QNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp SCSEEEECC-SSCEEEEEECSSB----TTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred CceEEecCC-CCeEEEEEECcCC----CCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 567888889 8999999999997 258999999999999999999999998 789999999999999999999999
Q ss_pred CCeEEEEEccCCceeEEEE--cCC-cceEEEEeCCCCEEEEE----eCCcEEEEEccccee---EEEecCCcceEEeeec
Q 019326 151 DDCLAMVNLVRGRRSFYHK--IGK-EASLIKFDGSGEKFFMV----TEEKVGIHQAEDAKL---LCELDGKKRILCAAPG 220 (343)
Q Consensus 151 d~~i~~wd~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~----~~~~i~~~d~~~~~~---~~~~~~~~~i~~~~~~ 220 (343)
|+.|++||+++++.+.... +.. .+..+.|+|++.+++++ .++.|++||+++.+. ...+.+...+.+++|+
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 276 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFD 276 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEE
T ss_pred CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEc
Confidence 9999999999998877662 223 37899999999999998 689999999998664 3344577889999998
Q ss_pred C-CCeEE-EEeCCCcEEEEECCCCce-eEEeccc--ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 221 E-NGVLF-TGGEDRSITAWDTNSGKV-AYCIEDA--HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 221 ~-~~~l~-~~~~dg~i~i~d~~~~~~-~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+ +++++ +|+.||.|++||+.++++ +..+. . |..+|.+++|+|++. ++++ .|+.+++|++.++.
T Consensus 277 ~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~-~~~~~~~v~~~~~sp~~~---------~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 277 PDTNIVYLCGKGDSSIRYFEITSEAPFLHYLS-MFSSKESQRGMGYMPKRG---------LEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp TTTTEEEEEETTCSCEEEEEECSSTTCEEEEE-EECCSSCCSEEEECCGGG---------SCGG--GTEEEEEEEEETTE
T ss_pred CCCCEEEEEEcCCCeEEEEEecCCCcceEeec-ccccCCcccceEEecccc---------ccee--cceeEEEEEcCCCc
Confidence 4 56665 566799999999998884 44444 3 568999999999986 5554 56799999998753
No 93
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1e-37 Score=270.99 Aligned_cols=285 Identities=12% Similarity=0.069 Sum_probs=216.2
Q ss_pred EEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeee--EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC
Q 019326 36 FSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLG--AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG 110 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg 110 (343)
....+|...|+||+|+ +++||+|+.||.|+|||+.+++... .+.+| ...|++|+|+|.+ +++|++|+.||
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH-~~~V~~l~f~p~~----~~~l~s~s~D~ 187 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGA-GGSITGLKFNPLN----TNQFYASSMEG 187 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSS-SCCCCEEEECSSC----TTEEEEECSSS
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCC-CCCEEEEEEeCCC----CCEEEEEeCCC
Confidence 3445789999999998 5789999999999999998775443 44578 8999999999853 27999999999
Q ss_pred eEEEEECCCcceeeeeee--ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCC-EEE
Q 019326 111 FVSIFDADPFVLLTSVKV--HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGE-KFF 187 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~--~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 187 (343)
+|++||+++......... +...+.+++|+|++++|++|+.||.|++||++.........+...|.+++|+|++. +++
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEE
Confidence 999999987544333322 23467899999999999999999999999997655444445668899999999987 566
Q ss_pred EE-eCCcEEEEEcccceeEEEe----cCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccc------c
Q 019326 188 MV-TEEKVGIHQAEDAKLLCEL----DGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSA------R 255 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~~~~~~~~----~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~------~ 255 (343)
++ .|+.|++||+++.+....+ .|...|.+++|+ ++.+|++++.||.|++||+.+++....+. .|.. .
T Consensus 268 s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~ 346 (435)
T 4e54_B 268 TASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLI-PHPHRHFQHLT 346 (435)
T ss_dssp EEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEEC-CCCCCCCSSSC
T ss_pred EecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEe-cccccccccce
Confidence 66 7999999999887654433 478899999998 46799999999999999999998877776 5542 2
Q ss_pred EEEEEEEecCCCCCCCCCCeEEEEEc------------CCCcEEEEeccCccccCCCcccccccccceeEE-EcCCCCce
Q 019326 256 VKGIVVLTKNDGGSTAENPYLVASAS------------SDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCL-AGSSTKSF 322 (343)
Q Consensus 256 v~~~~~~~~~~~~~~~~~~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~ 322 (343)
+....+++.+. ++++++ .++.|++||..++.... .....+...|.++ +|+|++.+
T Consensus 347 ~~~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~---~l~~~~~~~v~s~~~fspdg~~ 414 (435)
T 4e54_B 347 PIKAAWHPRYN---------LIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC---QLYDPESSGISSLNEFNPMGDT 414 (435)
T ss_dssp CCBCEECSSSS---------CEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE---EECCSSCCCCCCEEEECTTSSC
T ss_pred eEEEEEcCCCC---------EEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE---EEeCCCCCcEEEEEEECCCCCE
Confidence 23345555544 444432 44689999999874221 1122344567777 69999999
Q ss_pred eccccCCCCCCCccccC
Q 019326 323 KRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 323 ~~~~~~~~~~~~~~~~~ 339 (343)
++.+. ++.++.++..+
T Consensus 415 lasg~-d~~i~iW~~~~ 430 (435)
T 4e54_B 415 LASAM-GYHILIWSQQE 430 (435)
T ss_dssp EEEEC-SSEEEECCCC-
T ss_pred EEEEc-CCcEEEEECCc
Confidence 98876 56666666544
No 94
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8.9e-37 Score=251.70 Aligned_cols=250 Identities=16% Similarity=0.156 Sum_probs=202.7
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC--cceeeeeeeccccEEEEEEecC--CCEEEEEeCC
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP--FVLLTSVKVHKKGVNDLAVHHS--GKLALTVGRD 151 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~~~d 151 (343)
..+.+| ...|.+++|+|++ ++|++|+.|++|++||+.+ .+++.++.+|.+.|.+++|+|+ +++|++++.|
T Consensus 3 ~~~~~h-~~~V~~~~~s~~g-----~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D 76 (297)
T 2pm7_B 3 VIANAH-NEMIHDAVMDYYG-----KRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD 76 (297)
T ss_dssp EECCSC-SSCEEEEEECTTS-----SEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred eeccCC-cCceEEEEECCCC-----CEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC
Confidence 345678 8999999999999 8999999999999999964 4678899999999999999863 8899999999
Q ss_pred CeEEEEEccCCc--eeEE-EEcCCcceEEEEeCC--CCEEEEE-eCCcEEEEEccccee--EEEe-cCCcceEEeeecCC
Q 019326 152 DCLAMVNLVRGR--RSFY-HKIGKEASLIKFDGS--GEKFFMV-TEEKVGIHQAEDAKL--LCEL-DGKKRILCAAPGEN 222 (343)
Q Consensus 152 ~~i~~wd~~~~~--~~~~-~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~d~~~~~~--~~~~-~~~~~i~~~~~~~~ 222 (343)
++|++||+++++ .... ..+...+.+++|+|+ +.+++++ .|+.|++||+++... ...+ .|...+.+++|++.
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 999999998874 2222 235678999999997 7889888 899999999987632 2233 48889999999853
Q ss_pred --------------CeEEEEeCCCcEEEEECCCCc----eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCC
Q 019326 223 --------------GVLFTGGEDRSITAWDTNSGK----VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG 284 (343)
Q Consensus 223 --------------~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg 284 (343)
++|++|+.|+.|++||+++++ ....+. +|...|.+++|+|++. .+.+|++++.|+
T Consensus 157 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~~------~~~~las~s~D~ 229 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVL------LRSYMASVSQDR 229 (297)
T ss_dssp C------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCS------SSEEEEEEETTS
T ss_pred cccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCCC------CceEEEEEECCC
Confidence 589999999999999998776 556777 9999999999999841 112999999999
Q ss_pred cEEEEeccCccccCCC-cccccccccceeEEEcCCCCceeccccCCCCCCCcccc
Q 019326 285 VICVWDVRMAIKEKPL-PLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 285 ~i~vwd~~~~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
+|++||+++....... .+....+...|.+++|+|++.+++.+..|+.++.++..
T Consensus 230 ~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 230 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 9999999874211100 11112345679999999999999999999988776543
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.6e-36 Score=263.15 Aligned_cols=273 Identities=11% Similarity=0.129 Sum_probs=213.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC------------CCeEEEEec--C--ceEEEeeCCCeEE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL------------SPITTVAVS--G--TAAASGGTDDTIH 65 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~v~~l~~~--~--~~l~s~~~dg~i~ 65 (343)
.|++|+.||.|++|++....... ............+.+|. .+|++++|+ + ..|++++.|+.|+
T Consensus 42 ~la~g~~dg~v~iw~~~~~~~~~-~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~ 120 (447)
T 3dw8_B 42 LLATGDKGGRVVIFQQEQENKIQ-SHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIK 120 (447)
T ss_dssp EEEEEETTSEEEEEEECC------CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEE
T ss_pred EEEEEcCCCeEEEEEecCCCCCC-cccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEE
Confidence 58999999999999998632100 01112345677788998 889999999 4 6899999999999
Q ss_pred EEEcCCCeee---------------------------------------eE-eccCCCCCeEEEEEeCCCCCCCCceEEE
Q 019326 66 LYDLSTSSSL---------------------------------------GA-IHHHESSSVTSLAFYTPQNLSVPRNLFS 105 (343)
Q Consensus 66 iwd~~~~~~~---------------------------------------~~-~~~~~~~~v~~l~~~~~~~~~~~~~l~s 105 (343)
+||+.+++.. .. ..+| ...|.+++|+|++ ++|++
T Consensus 121 iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~-----~~l~s 194 (447)
T 3dw8_B 121 LWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAH-TYHINSISINSDY-----ETYLS 194 (447)
T ss_dssp EEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCC-SSCCCEEEECTTS-----SEEEE
T ss_pred EEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCC-CcceEEEEEcCCC-----CEEEE
Confidence 9999865432 12 2467 8999999999998 78999
Q ss_pred eeCCCeEEEEECCC-cceee-------eeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCce----eEEEEcCC
Q 019326 106 TSADGFVSIFDADP-FVLLT-------SVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRR----SFYHKIGK 172 (343)
Q Consensus 106 ~~~dg~i~iwd~~~-~~~~~-------~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~----~~~~~~~~ 172 (343)
| .|+.|++||+++ .+.+. .+.+|...|.+++|+|++ ++|++++.||.|++||+++++. ........
T Consensus 195 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 273 (447)
T 3dw8_B 195 A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPE 273 (447)
T ss_dssp E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-
T ss_pred e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCC
Confidence 8 799999999984 44444 355789999999999998 9999999999999999999875 44444332
Q ss_pred -------------cceEEEEeCCCCEEEEEeCCcEEEEEccc-ceeEEEecCCcc----------------eEEeeec-C
Q 019326 173 -------------EASLIKFDGSGEKFFMVTEEKVGIHQAED-AKLLCELDGKKR----------------ILCAAPG-E 221 (343)
Q Consensus 173 -------------~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~----------------i~~~~~~-~ 221 (343)
.+.+++|+|++++++++.++.|++||+++ ++.+..+..+.. +..++|+ +
T Consensus 274 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~ 353 (447)
T 3dw8_B 274 DPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGS 353 (447)
T ss_dssp ----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTT
T ss_pred CccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCC
Confidence 79999999999999999559999999997 787777764433 2337888 4
Q ss_pred CCeEEEEeCCCcEEEEECCCCceeEEec-------------------------------ccccccEEEEEEEecCCCCCC
Q 019326 222 NGVLFTGGEDRSITAWDTNSGKVAYCIE-------------------------------DAHSARVKGIVVLTKNDGGST 270 (343)
Q Consensus 222 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------------------------~~h~~~v~~~~~~~~~~~~~~ 270 (343)
+.+|++|+.||.|++||+.+++.+.... ..+...|..++|+|++.
T Consensus 354 ~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~---- 429 (447)
T 3dw8_B 354 DSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKEN---- 429 (447)
T ss_dssp SSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSS----
T ss_pred CCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCC----
Confidence 6789999999999999999887653111 02345788999999987
Q ss_pred CCCCeEEEEEcCCCcEEEEecc
Q 019326 271 AENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 271 ~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+|++++.++ +++|.-+
T Consensus 430 -----~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 430 -----IIAVATTNN-LYIFQDK 445 (447)
T ss_dssp -----EEEEECSSC-EEEEECC
T ss_pred -----EEEEEecce-eeeeccc
Confidence 999888775 7888654
No 96
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.4e-35 Score=254.11 Aligned_cols=272 Identities=16% Similarity=0.186 Sum_probs=224.9
Q ss_pred CeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEec--cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc
Q 019326 44 PITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIH--HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120 (343)
Q Consensus 44 ~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 120 (343)
.++.|+|+ ++.|++|. |++|+|||..+++....+. .| ...|++|+|+|++ ++|++|+.||+|++||+.++
T Consensus 107 y~~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~-~~~V~sv~fspdg-----~~lasgs~Dg~v~iWd~~~~ 179 (420)
T 4gga_A 107 YLNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEG-----NYLAVGTSSAEVQLWDVQQQ 179 (420)
T ss_dssp TCBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTS-----SEEEEEETTSCEEEEETTTT
T ss_pred cceeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCC-CCcEEEEEECCCC-----CEEEEEECCCeEEEEEcCCC
Confidence 46779999 77777765 8999999999998887665 45 6789999999999 89999999999999999999
Q ss_pred ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeE--EEEcCCcceEEEEeCCCCEEEEE-eCCcEEEE
Q 019326 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF--YHKIGKEASLIKFDGSGEKFFMV-TEEKVGIH 197 (343)
Q Consensus 121 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~ 197 (343)
+++..+.+|...+.+++++ +..|++++.|+.+++||........ ...+...+..+.++|++.+++++ .|+.+++|
T Consensus 180 ~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 180 KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 257 (420)
T ss_dssp EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEE
Confidence 9999999999999988876 5699999999999999998765432 33456788999999999999999 89999999
Q ss_pred Eccccee----EE-EecCCcceEEeeecC--CCeEEE--EeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCC
Q 019326 198 QAEDAKL----LC-ELDGKKRILCAAPGE--NGVLFT--GGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGG 268 (343)
Q Consensus 198 d~~~~~~----~~-~~~~~~~i~~~~~~~--~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 268 (343)
+..+++. +. ...+...|.+++|++ ..++++ |+.|++|++||+.+++....+. +...+.++.|++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--~~~~v~~~~~~~~~~-- 333 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYK-- 333 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE--CSSCEEEEEEETTTT--
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec--cccceeeeeecCCCC--
Confidence 9987653 22 333788999999984 345554 4579999999999999998887 556889999999887
Q ss_pred CCCCCCeEEEEEc--CCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 269 STAENPYLVASAS--SDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 269 ~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
.+++++ .|+.|+|||+.++...... ..+...|++++|+|++.+++.+..|+.++.++..+
T Consensus 334 -------~lv~~sg~~d~~I~iwd~~~~~~v~~l----~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 334 -------ELISGHGFAQNQLVIWKYPTMAKVAEL----KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp -------EEEEEECTTTCCEEEEETTTCCEEEEE----CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred -------eEEEEEecCCCEEEEEECCCCcEEEEE----cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 666554 7999999999987532211 13466899999999999999999999887766543
No 97
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.4e-35 Score=249.40 Aligned_cols=258 Identities=14% Similarity=0.159 Sum_probs=219.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--Cc-eEEEeeCCCeEEEEEc-CCCeeeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GT-AAASGGTDDTIHLYDL-STSSSLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~~~dg~i~iwd~-~~~~~~~~ 77 (343)
.|++|+.||.|++|++... .. ......+.+|...|++++|+ ++ +|++|+.||.|++||+ .+++. ..
T Consensus 25 ~l~~~~~d~~v~iw~~~~~-------~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~ 94 (342)
T 1yfq_A 25 LLLITSWDGSLTVYKFDIQ-------AK--NVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QA 94 (342)
T ss_dssp EEEEEETTSEEEEEEEETT-------TT--EEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EE
T ss_pred EEEEEcCCCeEEEEEeCCC-------Cc--cccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-Ee
Confidence 4889999999999999872 21 12233445899999999998 78 8999999999999999 77654 66
Q ss_pred ecc--CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC---------cceeeeeeeccccEEEEEEecCCCEEE
Q 019326 78 IHH--HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP---------FVLLTSVKVHKKGVNDLAVHHSGKLAL 146 (343)
Q Consensus 78 ~~~--~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---------~~~~~~~~~~~~~v~~i~~~~~~~~l~ 146 (343)
+.. | ...|.+++|+| + .+|++++.|+.|++||+++ ++++..+. |...|.+++|+|++ ++
T Consensus 95 ~~~~~~-~~~v~~l~~~~-~-----~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~ 164 (342)
T 1yfq_A 95 LTNNEA-NLGICRICKYG-D-----DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LI 164 (342)
T ss_dssp CBSCCC-CSCEEEEEEET-T-----TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EE
T ss_pred ccccCC-CCceEEEEeCC-C-----CEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EE
Confidence 777 8 89999999999 7 7999999999999999987 77777777 88999999999986 99
Q ss_pred EEeCCCeEEEEEccC-Ccee---EEEEcCCcceEEEEeC-CCCEEEEE-eCCcEEEEEcccc------eeEEEec-CCc-
Q 019326 147 TVGRDDCLAMVNLVR-GRRS---FYHKIGKEASLIKFDG-SGEKFFMV-TEEKVGIHQAEDA------KLLCELD-GKK- 212 (343)
Q Consensus 147 ~~~~d~~i~~wd~~~-~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~i~~~d~~~~------~~~~~~~-~~~- 212 (343)
+++.|+.|++||+++ +... ....+...+.+++|+| ++++++++ .++.+++|+++.. +....+. |..
T Consensus 165 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T 1yfq_A 165 VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244 (342)
T ss_dssp EEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCC
T ss_pred EEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccc
Confidence 999999999999998 5532 2334457899999999 99999999 8999999999876 6666665 433
Q ss_pred --------ceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccc-cccEEEEEEEecCCCCCCCCCCeEEEEEcC
Q 019326 213 --------RILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAH-SARVKGIVVLTKNDGGSTAENPYLVASASS 282 (343)
Q Consensus 213 --------~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 282 (343)
.|.+++|++ +++|++++.||.|++||+.+++.+..+. +| ..+|.+++ +++. +|++++.
T Consensus 245 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~h~~~v~~~~--~~~~---------~l~s~s~ 312 (342)
T 1yfq_A 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA-KFNEDSVVKIA--CSDN---------ILCLATS 312 (342)
T ss_dssp TTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC-CCSSSEEEEEE--ECSS---------EEEEEEE
T ss_pred ccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh-cccCCCceEec--CCCC---------eEEEEec
Confidence 899999994 6799999999999999999999999998 77 99999999 7776 9999999
Q ss_pred CCc-EEEEec
Q 019326 283 DGV-ICVWDV 291 (343)
Q Consensus 283 dg~-i~vwd~ 291 (343)
||. .+.|..
T Consensus 313 Dg~~~~~~~~ 322 (342)
T 1yfq_A 313 DDTFKTNAAI 322 (342)
T ss_dssp CTHHHHCSSS
T ss_pred CCcccccccc
Confidence 998 555554
No 98
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.8e-36 Score=256.79 Aligned_cols=277 Identities=11% Similarity=0.081 Sum_probs=216.9
Q ss_pred CCCeEEEEec--CceEEEeeCC-------CeEEEEEcCCCee----------eeEeccCCCCCeEEEEEeCCCCCCCCce
Q 019326 42 LSPITTVAVS--GTAAASGGTD-------DTIHLYDLSTSSS----------LGAIHHHESSSVTSLAFYTPQNLSVPRN 102 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~d-------g~i~iwd~~~~~~----------~~~~~~~~~~~v~~l~~~~~~~~~~~~~ 102 (343)
..||++++|+ +.+|++|+.+ +.|++|++..+.. ...+..| ...|.++++.++ .
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~-~~~v~s~~~~~~-------~ 85 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDN-DDSPTAIDASKG-------I 85 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTT-SCCCCEEEEETT-------E
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCC-CCceEEEEeCCC-------E
Confidence 4689999998 7889988754 3599999876532 1234566 778888887653 4
Q ss_pred EEEe-----------eCCCeEEEEECCCcceeee-e--------eeccccEEEEEEecCCCEEEEEe--CCCeEEEEEcc
Q 019326 103 LFST-----------SADGFVSIFDADPFVLLTS-V--------KVHKKGVNDLAVHHSGKLALTVG--RDDCLAMVNLV 160 (343)
Q Consensus 103 l~s~-----------~~dg~i~iwd~~~~~~~~~-~--------~~~~~~v~~i~~~~~~~~l~~~~--~d~~i~~wd~~ 160 (343)
+++| +.|+.+++|++.+...... . ..+...+.+++|+|||+++++++ .|++|++||++
T Consensus 86 ~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~ 165 (365)
T 4h5i_A 86 ILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPS 165 (365)
T ss_dssp EEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETT
T ss_pred EEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECC
Confidence 4444 5578899999865432211 1 12344689999999999887554 68999999999
Q ss_pred CCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec---CCcceEEeeec-CCCeEEEEeCCC----
Q 019326 161 RGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD---GKKRILCAAPG-ENGVLFTGGEDR---- 232 (343)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~-~~~~l~~~~~dg---- 232 (343)
+++.+....+...|..++|+|++++++++.++.+.+|+..+++...... |...+.+++|+ ++.++++++.|+
T Consensus 166 ~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 166 DLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGI 245 (365)
T ss_dssp TTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCE
T ss_pred CCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCccee
Confidence 9999988888899999999999999999988888999888877665433 67889999998 567888888877
Q ss_pred cEEEEECCCCce----eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccc
Q 019326 233 SITAWDTNSGKV----AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTN 308 (343)
Q Consensus 233 ~i~i~d~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 308 (343)
.+++|++..... ...+. +|...|++++|+|++. +||+|+.|++|+|||+++++.... ....+.
T Consensus 246 ~i~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~Spdg~---------~lasgs~D~~V~iwd~~~~~~~~~---~~~gH~ 312 (365)
T 4h5i_A 246 VLTKISIKSGNTSVLRSKQVT-NRFKGITSMDVDMKGE---------LAVLASNDNSIALVKLKDLSMSKI---FKQAHS 312 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEEE-SSCSCEEEEEECTTSC---------EEEEEETTSCEEEEETTTTEEEEE---ETTSSS
T ss_pred EEeecccccceecceeeeeec-CCCCCeEeEEECCCCC---------ceEEEcCCCEEEEEECCCCcEEEE---ecCccc
Confidence 688899876643 34555 8999999999999987 999999999999999998752221 112356
Q ss_pred cceeEEEcCCCCceeccccCCCCCCCccccC
Q 019326 309 SRLTCLAGSSTKSFKRPQIGDSAPKGEEKAS 339 (343)
Q Consensus 309 ~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
..|++++||||+++++.++.|+.++.++.++
T Consensus 313 ~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 313 FAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 6799999999999999999999998887643
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-36 Score=277.31 Aligned_cols=242 Identities=18% Similarity=0.221 Sum_probs=207.3
Q ss_pred EEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcC--CCeeeeEeccCCCCCeEEEEEeCC--CCCCCCceEEEeeCC
Q 019326 36 FSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLS--TSSSLGAIHHHESSSVTSLAFYTP--QNLSVPRNLFSTSAD 109 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~v~~l~~~~~--~~~~~~~~l~s~~~d 109 (343)
..+.+|.++|++++|+ +++|++|+.||.|++||+. +++.+..+.+| ...|.+++|+|+ + ++|++|+.|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~-----~~l~s~s~D 76 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFG-----TILASCSYD 76 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCC-SSCEEEEEECCTTSC-----SEEEEEETT
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCC-cCceEEEEecCCCCC-----CEEEEEeCC
Confidence 3567999999999998 8899999999999999998 55778888899 999999999987 6 799999999
Q ss_pred CeEEEEECCCcc--eeeeeeeccccEEEEEEecC--CCEEEEEeCCCeEEEEEccCCc---eeEEEEcCCcceEEEEeC-
Q 019326 110 GFVSIFDADPFV--LLTSVKVHKKGVNDLAVHHS--GKLALTVGRDDCLAMVNLVRGR---RSFYHKIGKEASLIKFDG- 181 (343)
Q Consensus 110 g~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~--~~~l~~~~~d~~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~- 181 (343)
|.|++||+.+++ .+..+..|...|.+++|+|+ ++.+++++.||.|++||++++. ......+...+.+++|+|
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCc
Confidence 999999998876 77788889999999999999 9999999999999999998873 233445567899999999
Q ss_pred ------------CCCEEEEE-eCCcEEEEEcccc----eeEEEec-CCcceEEeeecC----CCeEEEEeCCCcEEEEEC
Q 019326 182 ------------SGEKFFMV-TEEKVGIHQAEDA----KLLCELD-GKKRILCAAPGE----NGVLFTGGEDRSITAWDT 239 (343)
Q Consensus 182 ------------~~~~~~~~-~~~~i~~~d~~~~----~~~~~~~-~~~~i~~~~~~~----~~~l~~~~~dg~i~i~d~ 239 (343)
++..++++ .|+.|++||++++ .....+. |..+|.+++|++ +.++++|+.||.|++||+
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp C---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred ccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 48888888 8999999999887 4444554 789999999994 479999999999999999
Q ss_pred CCCc-----eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 240 NSGK-----VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 240 ~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
++++ ...... .|...|++++|+|++. +|++++.||.|++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~---------~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 237 DNEQGPWKKTLLKEE-KFPDVLWRASWSLSGN---------VLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSSSCCBCCBSSSS-CCSSCCCCEEECTTTC---------CEEEECSSSCEECCBCCS
T ss_pred CCCCCcceeEEeccC-CCCCceEEEEEcCCCC---------EEEEEcCCCEEEEEecCC
Confidence 8864 222333 5889999999999887 999999999999999985
No 100
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.4e-35 Score=255.16 Aligned_cols=269 Identities=14% Similarity=0.142 Sum_probs=219.0
Q ss_pred CeEEEEecCc---eEEEeeCCCeEEEEEcCCCe----eeeEeccCCCCCeEEEEEeC-CCCCCCCceEEEeeCCCeEEEE
Q 019326 44 PITTVAVSGT---AAASGGTDDTIHLYDLSTSS----SLGAIHHHESSSVTSLAFYT-PQNLSVPRNLFSTSADGFVSIF 115 (343)
Q Consensus 44 ~v~~l~~~~~---~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~v~~l~~~~-~~~~~~~~~l~s~~~dg~i~iw 115 (343)
....+++++. ++++++.||.|++|++.+.. .+..+.+| ...|++++|+| ++ ++|++|+.||+|++|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~p~~~-----~~l~s~s~dg~v~vw 109 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGH-TAPVLDIAWCPHND-----NVIASGSEDCTVMVW 109 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCC-SSCEEEEEECTTCT-----TEEEEEETTSEEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecC-CCCEEEEEeCCCCC-----CEEEEEeCCCeEEEE
Confidence 3445777743 34457899999999996642 34456778 99999999999 66 799999999999999
Q ss_pred ECCCc-------ceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEEE---cCCcceEEEEeCCCC
Q 019326 116 DADPF-------VLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHK---IGKEASLIKFDGSGE 184 (343)
Q Consensus 116 d~~~~-------~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~~~~~~~~~~~~ 184 (343)
|+.++ +++..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++...... +...+.+++|+|++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 189 (402)
T 2aq5_A 110 EIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGA 189 (402)
T ss_dssp ECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSS
T ss_pred EccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCC
Confidence 99887 6788899999999999999998 799999999999999999998877662 567899999999999
Q ss_pred EEEEE-eCCcEEEEEcccceeEEEe-c-CCcc-eEEeeecC-CCeEEEE---eCCCcEEEEECCCCce-eEEeccccccc
Q 019326 185 KFFMV-TEEKVGIHQAEDAKLLCEL-D-GKKR-ILCAAPGE-NGVLFTG---GEDRSITAWDTNSGKV-AYCIEDAHSAR 255 (343)
Q Consensus 185 ~~~~~-~~~~i~~~d~~~~~~~~~~-~-~~~~-i~~~~~~~-~~~l~~~---~~dg~i~i~d~~~~~~-~~~~~~~h~~~ 255 (343)
+++++ .|+.|++||+++++.+..+ . |... +.++.|++ +.++++| +.|+.|++||+++++. +......|...
T Consensus 190 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 269 (402)
T 2aq5_A 190 LICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSG 269 (402)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSS
T ss_pred EEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCc
Confidence 99999 8999999999999998887 3 5444 88899985 5577777 6899999999998764 33333357888
Q ss_pred EEEEEEEecCCCCCCCCCCeEEE-EEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccC
Q 019326 256 VKGIVVLTKNDGGSTAENPYLVA-SASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIG 328 (343)
Q Consensus 256 v~~~~~~~~~~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~ 328 (343)
+.+++|+|++. +|+ +++.||.|++||+.++.. ....+....+...|.+++|+|++.+++.+.+
T Consensus 270 v~~~~~s~~~~---------~l~~~g~~dg~i~i~d~~~~~~-~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 270 VLLPFFDPDTN---------IVYLCGKGDSSIRYFEITSEAP-FLHYLSMFSSKESQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp CEEEEEETTTT---------EEEEEETTCSCEEEEEECSSTT-CEEEEEEECCSSCCSEEEECCGGGSCGGGTE
T ss_pred eeEEEEcCCCC---------EEEEEEcCCCeEEEEEecCCCc-ceEeecccccCCcccceEEecccccceecce
Confidence 99999999987 775 666899999999997641 0112333345678999999999999876544
No 101
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.7e-36 Score=250.95 Aligned_cols=248 Identities=17% Similarity=0.126 Sum_probs=195.5
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc--eeeeeeeccccEEEEEEec--CCCEEEEEeCCCe
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV--LLTSVKVHKKGVNDLAVHH--SGKLALTVGRDDC 153 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~--~~~~l~~~~~d~~ 153 (343)
+.+| ...|++++|+|++ ++|++|+.|++|++||+.+++ .+..+.+|...|.+++|+| ++++|++++.|++
T Consensus 9 ~~~H-~~~V~~v~~s~~g-----~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 9 DTSH-EDMIHDAQMDYYG-----TRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp ------CCEEEEEECGGG-----CEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred cccc-cCeEEEeeEcCCC-----CEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 4567 9999999999998 899999999999999997764 5678899999999999986 4889999999999
Q ss_pred EEEEEccCCc--eeEE-EEcCCcceEEEEeCC--CCEEEEE-eCCcEEEEEcccceeE---EEec-CCcceEEeeecCC-
Q 019326 154 LAMVNLVRGR--RSFY-HKIGKEASLIKFDGS--GEKFFMV-TEEKVGIHQAEDAKLL---CELD-GKKRILCAAPGEN- 222 (343)
Q Consensus 154 i~~wd~~~~~--~~~~-~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~d~~~~~~~---~~~~-~~~~i~~~~~~~~- 222 (343)
|++||+++++ .... ..+...+.+++|+|+ +.+++++ .|+.|++||++..... ..+. |...+.++.|++.
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence 9999999874 2222 235678999999998 7889998 8999999999876422 2222 6778888888753
Q ss_pred -----------------CeEEEEeCCCcEEEEECCCC---ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcC
Q 019326 223 -----------------GVLFTGGEDRSITAWDTNSG---KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASS 282 (343)
Q Consensus 223 -----------------~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 282 (343)
.+|++|+.|+.|++||++.. +.+..+. +|...|.+++|+|++. .++.+|++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~~~V~~v~~sp~~~-----~~~~~las~s~ 236 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHSDWVRDVAWAPSIG-----LPTSTIASCSQ 236 (316)
T ss_dssp CC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCSSCEEEEECCCCSS-----CSCCEEEEEET
T ss_pred CCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCCCceEEEEecCCCC-----CCCceEEEEcC
Confidence 58999999999999999755 3566677 9999999999999851 01128999999
Q ss_pred CCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 283 DGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 283 dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
||+|++|++++.............+...|.+++|+|++.+++.+..|+.++.++.
T Consensus 237 D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 237 DGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp TCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred CCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 9999999998742111111111234568999999999999999999998876654
No 102
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=239.55 Aligned_cols=274 Identities=15% Similarity=0.170 Sum_probs=224.6
Q ss_pred CeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEec--cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc
Q 019326 44 PITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIH--HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120 (343)
Q Consensus 44 ~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 120 (343)
..++|+|+ ++.||+| .|++|+|||+.+++.+..+. .| ...|++++|+|++ ++|++|+.||+|++||++++
T Consensus 27 y~~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~-~~~V~~v~~~~~~-----~~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 27 YLNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEG-----NYLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp TCBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTS-----SEEEEEETTSEEEEEETTTT
T ss_pred cceEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCC-CCeEEEEEECCCC-----CEEEEEECCCcEEEeecCCc
Confidence 36789999 6677665 59999999999999888775 45 7789999999999 89999999999999999999
Q ss_pred ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeE--EEEcCCcceEEEEeCCCCEEEEE-eCCcEEEE
Q 019326 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF--YHKIGKEASLIKFDGSGEKFFMV-TEEKVGIH 197 (343)
Q Consensus 121 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~ 197 (343)
+++..+.+|...+.++.+. +..+++++.++.+++|+........ ...+...+..+.+.+++++++++ .|+.|++|
T Consensus 100 ~~~~~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iw 177 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 177 (318)
T ss_dssp EEEEEEECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeEEEecCccceEEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEE
Confidence 9999999999988876655 5699999999999999998765433 33456778999999999999999 89999999
Q ss_pred EcccceeE-----EEecCCcceEEeeecC--CCe--EEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCC
Q 019326 198 QAEDAKLL-----CELDGKKRILCAAPGE--NGV--LFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGG 268 (343)
Q Consensus 198 d~~~~~~~-----~~~~~~~~i~~~~~~~--~~~--l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 268 (343)
|+++++.. ....+...+.++.+.+ ... +++++.++.|++||........... +...+..+.+++.+.
T Consensus 178 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~--~~~~v~~~~~~~~~~-- 253 (318)
T 4ggc_A 178 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYK-- 253 (318)
T ss_dssp ESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEEETTTT--
T ss_pred ECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc--ceeeeeeeeeccccc--
Confidence 99886532 2223677899998874 233 3467788999999999888777665 788899999999887
Q ss_pred CCCCCCeEEEEE--cCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccccCcc
Q 019326 269 STAENPYLVASA--SSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKASME 341 (343)
Q Consensus 269 ~~~~~~~~l~s~--~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 341 (343)
.++++ +.|+.|++||++++...... ..+...|++++|+|++.+++.+..|+.++.++..+.+
T Consensus 254 -------~~~~~sg~~d~~i~iwd~~~~~~~~~l----~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 254 -------ELISGHGFAQNQLVIWKYPTMAKVAEL----KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp -------EEEEEECTTTCCEEEEETTTCCEEEEE----CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred -------ceEEEEEcCCCEEEEEECCCCcEEEEE----cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 55554 48999999999987532211 1246689999999999999999999999988876654
No 103
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-36 Score=265.51 Aligned_cols=271 Identities=11% Similarity=0.023 Sum_probs=205.1
Q ss_pred CCCCeEEEEec--C---------ceEEE-------------------eeCCCeEEEEEcCCCeee----eEeccCCCCCe
Q 019326 41 HLSPITTVAVS--G---------TAAAS-------------------GGTDDTIHLYDLSTSSSL----GAIHHHESSSV 86 (343)
Q Consensus 41 h~~~v~~l~~~--~---------~~l~s-------------------~~~dg~i~iwd~~~~~~~----~~~~~~~~~~v 86 (343)
+.++|.+|+|+ + ++||+ ++.|++|+|||+.+++.. ..+..| .+.|
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~-~~~V 210 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHS-FGEV 210 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEEC-CCSE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEec-CCcE
Confidence 56778888887 3 45555 557899999999887643 335556 7899
Q ss_pred EEEEEeCCCCC-CCCceEEEeeCCCeEEEEECCCcce-----------eeeeeeccccEEEEEEecCCCEEEEEeCCCeE
Q 019326 87 TSLAFYTPQNL-SVPRNLFSTSADGFVSIFDADPFVL-----------LTSVKVHKKGVNDLAVHHSGKLALTVGRDDCL 154 (343)
Q Consensus 87 ~~l~~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i 154 (343)
.+++|+|++.. ..+.+|++++.||+|++||+.+++. ...+.+|...|.+++|+++ ..|++|+.||+|
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV 289 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFV 289 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEE
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEE
Confidence 99999997210 0126999999999999999976532 2467789999999999986 489999999999
Q ss_pred EEEEccCCcee-E-EEEcCCcceEE--EEeCCC-CEEEEE-eCCcEEEEEcccceeEEEec-CC--cceEEeeecC-CCe
Q 019326 155 AMVNLVRGRRS-F-YHKIGKEASLI--KFDGSG-EKFFMV-TEEKVGIHQAEDAKLLCELD-GK--KRILCAAPGE-NGV 224 (343)
Q Consensus 155 ~~wd~~~~~~~-~-~~~~~~~~~~~--~~~~~~-~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~--~~i~~~~~~~-~~~ 224 (343)
++||++++... . ...+...|.++ .++|++ .+|+++ .|+.+++||+++++....+. |. ..+.+++|++ +..
T Consensus 290 ~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~ 369 (524)
T 2j04_B 290 AEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS 369 (524)
T ss_dssp EEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE
T ss_pred EEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCe
Confidence 99999977432 2 34466789988 567887 888888 89999999999987765554 22 3478899996 678
Q ss_pred EEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccc
Q 019326 225 LFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAE 304 (343)
Q Consensus 225 l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 304 (343)
+++++.|++|++||++++..+..+. +|...|++++|+|++. +|++|+.||+|++||+.............
T Consensus 370 l~s~~~d~tv~lwd~~~~~~~~~l~-gH~~~V~sva~Sp~g~---------~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~ 439 (524)
T 2j04_B 370 YIYSDGASSLRAVPSRAAFAVHPLV-SRETTITAIGVSRLHP---------MVLAGSADGSLIITNAARRLLHGIKNSSA 439 (524)
T ss_dssp EEEECSSSEEEEEETTCTTCCEEEE-ECSSCEEEEECCSSCC---------BCEEEETTTEEECCBSCSSTTTCC-----
T ss_pred EEEeCCCCcEEEEECcccccceeee-cCCCceEEEEeCCCCC---------eEEEEECCCEEEEEechHhhccccccCcc
Confidence 9999999999999999999888888 8999999999999887 99999999999999986531100000000
Q ss_pred cccccceeEEEcCCCCcee
Q 019326 305 AKTNSRLTCLAGSSTKSFK 323 (343)
Q Consensus 305 ~~~~~~i~~~~~s~~~~~~ 323 (343)
......+.+++++|++..+
T Consensus 440 ~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 440 TQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp -CCCCEEEECBCCSSSCEE
T ss_pred ceeeeEEEEeccCCCCCeE
Confidence 1122257899999998743
No 104
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=9.4e-36 Score=256.37 Aligned_cols=299 Identities=17% Similarity=0.130 Sum_probs=234.0
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEec------
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIH------ 79 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~------ 79 (343)
++.+++|++.. ......+.+|.++|++++|+ +++|++|+.||.|++||+.+++....+.
T Consensus 22 ~~~~~v~~~~~------------~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~ 89 (408)
T 4a11_B 22 ESTRRVLGLEL------------NKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCS 89 (408)
T ss_dssp HHHHHHHTEEE------------CTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEE
T ss_pred cCcceeecccc------------CcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccccc
Confidence 45567777765 23345567899999999997 6899999999999999999887665553
Q ss_pred -------cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCC---CEEEEEe
Q 019326 80 -------HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG---KLALTVG 149 (343)
Q Consensus 80 -------~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~---~~l~~~~ 149 (343)
.| ...|.+++|+|++ +.+|++++.||.|++||+.+++....+. +...+.++.+.|.+ .++++++
T Consensus 90 ~~~~~~~~~-~~~v~~~~~~~~~----~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 163 (408)
T 4a11_B 90 IGRDHPDVH-RYSVETVQWYPHD----TGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGT 163 (408)
T ss_dssp ECTTCTTCC-SSCEEEEEECTTC----TTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEE
T ss_pred ccccccccC-CCcEEEEEEccCC----CcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEc
Confidence 46 8999999999944 2799999999999999999988888877 77889999999854 5999999
Q ss_pred CCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCE-EEEE-eCCcEEEEEcccce-eEEEe----------------c
Q 019326 150 RDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEK-FFMV-TEEKVGIHQAEDAK-LLCEL----------------D 209 (343)
Q Consensus 150 ~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~-~~~~i~~~d~~~~~-~~~~~----------------~ 209 (343)
.|+.|++||+++++...... +...+.+++|+|++.. ++++ .++.|++||++++. ....+ .
T Consensus 164 ~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (408)
T 4a11_B 164 RGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTA 243 (408)
T ss_dssp SSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCS
T ss_pred CCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccc
Confidence 99999999999988766655 5678999999999984 7777 89999999998765 33332 3
Q ss_pred CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEeccccc-----ccEEEEEEEecCCCCCCCCCCeEEEEEcCC
Q 019326 210 GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHS-----ARVKGIVVLTKNDGGSTAENPYLVASASSD 283 (343)
Q Consensus 210 ~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d 283 (343)
|...|.+++|++ +++|++++.||.|++||+.+++....+. .+. ..+.......... .+++++.|
T Consensus 244 ~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 313 (408)
T 4a11_B 244 HNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNY-GKVCNNSKKGLKFTVSCGCSS---------EFVFVPYG 313 (408)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCC-CCCCCCCSSCCCCEECCSSSS---------CEEEEEET
T ss_pred ccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceecc-ccccccccccceeEEecCCCc---------eEEEEecC
Confidence 678899999994 5799999999999999999987665443 221 1111111111122 67777889
Q ss_pred CcEEEEeccCccccCCCccccc-ccccceeEEEcCCCCceeccccCCCCCCCccccCc
Q 019326 284 GVICVWDVRMAIKEKPLPLAEA-KTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKASM 340 (343)
Q Consensus 284 g~i~vwd~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 340 (343)
+.|++||+.++... ..+ .+...|.+++|+|++.+++.+..|+.++.++....
T Consensus 314 ~~i~v~d~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 314 STIAVYTVYSGEQI-----TMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp TEEEEEETTTCCEE-----EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred CEEEEEECcCCcce-----eeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 99999999986422 222 34567999999999999999999998776665443
No 105
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.9e-33 Score=240.92 Aligned_cols=262 Identities=16% Similarity=0.169 Sum_probs=222.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceE-EEeeCCCeEEEEEcCCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAA-ASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l-~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
.+++++.|+.|++||+.. .+....+..|. .+.+++|+ ++++ ++++.|+.|++||+.+++.+..+
T Consensus 4 l~vs~~~d~~v~v~d~~~------------~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~ 70 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTS------------NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV 70 (391)
T ss_dssp EEEEETTTTEEEEEETTT------------TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCEEEEEECCC------------CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE
Confidence 478899999999999986 24445556564 58999998 6665 67779999999999999999988
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceE-EEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEE-EEEeCCCeEEE
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNL-FSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLA-LTVGRDDCLAM 156 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~~~~~d~~i~~ 156 (343)
..+ ..+.+++|+|++ ++| ++++.++.|++||+.+++.+..+.. ...+.+++|+|+++.+ ++++.++.|++
T Consensus 71 ~~~--~~v~~~~~spdg-----~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~ 142 (391)
T 1l0q_A 71 PAG--SSPQGVAVSPDG-----KQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSV 142 (391)
T ss_dssp ECS--SSEEEEEECTTS-----SEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ECC--CCccceEECCCC-----CEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEE
Confidence 877 499999999998 556 4556779999999999988888774 4578999999999877 67888999999
Q ss_pred EEccCCceeEEEEcCCcceEEEEeCCCCEEE-EE-eCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEEe---C
Q 019326 157 VNLVRGRRSFYHKIGKEASLIKFDGSGEKFF-MV-TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTGG---E 230 (343)
Q Consensus 157 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~---~ 230 (343)
||+++++..........+..++|+|+++.++ ++ .++.|++||+++++....+.+...+.++++++ ++++++++ .
T Consensus 143 ~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 222 (391)
T 1l0q_A 143 INTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKY 222 (391)
T ss_dssp EETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSS
T ss_pred EECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcC
Confidence 9999999888888788889999999999885 44 78899999999999999988888999999984 56777777 6
Q ss_pred CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEE-EEEcCCCcEEEEeccCcc
Q 019326 231 DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLV-ASASSDGVICVWDVRMAI 295 (343)
Q Consensus 231 dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~ 295 (343)
++.|++||+.+++.+..+. .|. .+.+++|+|++. +| ++++.|+.|++||+.++.
T Consensus 223 ~~~v~~~d~~~~~~~~~~~-~~~-~~~~~~~s~dg~---------~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 223 FNTVSMIDTGTNKITARIP-VGP-DPAGIAVTPDGK---------KVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp CCEEEEEETTTTEEEEEEE-CCS-SEEEEEECTTSS---------EEEEEETTTTEEEEEETTTTE
T ss_pred CCcEEEEECCCCeEEEEEe-cCC-CccEEEEccCCC---------EEEEEcCCCCEEEEEECCCCc
Confidence 8999999999999988888 444 578999999886 66 677899999999999864
No 106
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.9e-34 Score=248.94 Aligned_cols=244 Identities=16% Similarity=0.229 Sum_probs=207.8
Q ss_pred EecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCC----------CeeeeEeccCCCCCeEEEEEeCCCCCCCCc-e
Q 019326 37 SYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLST----------SSSLGAIHHHESSSVTSLAFYTPQNLSVPR-N 102 (343)
Q Consensus 37 ~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~ 102 (343)
....|.+.|++++|+ +.+|++++.||.|++|++.+ .+.+..+..| ...|.+++|+|++ . +
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~-----~~~ 196 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH-QKEGYGLSWNPNL-----NGY 196 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC-SSCCCCEEECTTS-----TTE
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC-CCCeEEEEeCCCC-----CCe
Confidence 345799999999998 46899999999999999987 5777888888 8999999999998 5 9
Q ss_pred EEEeeCCCeEEEEECCCcce-------eeeeeeccccEEEEEEec-CCCEEEEEeCCCeEEEEEccCC---ceeEEE-Ec
Q 019326 103 LFSTSADGFVSIFDADPFVL-------LTSVKVHKKGVNDLAVHH-SGKLALTVGRDDCLAMVNLVRG---RRSFYH-KI 170 (343)
Q Consensus 103 l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~v~~i~~~~-~~~~l~~~~~d~~i~~wd~~~~---~~~~~~-~~ 170 (343)
|++|+.||.|++||+..+.. ...+..|...|.+++|+| ++.+|++++.||.|++||++++ +..... .+
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 276 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH 276 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC
Confidence 99999999999999987322 456678999999999999 6789999999999999999987 333333 55
Q ss_pred CCcceEEEEeCCCC-EEEEE-eCCcEEEEEccc-ceeEEEec-CCcceEEeeecCC--CeEEEEeCCCcEEEEECCC---
Q 019326 171 GKEASLIKFDGSGE-KFFMV-TEEKVGIHQAED-AKLLCELD-GKKRILCAAPGEN--GVLFTGGEDRSITAWDTNS--- 241 (343)
Q Consensus 171 ~~~~~~~~~~~~~~-~~~~~-~~~~i~~~d~~~-~~~~~~~~-~~~~i~~~~~~~~--~~l~~~~~dg~i~i~d~~~--- 241 (343)
...+.+++|+|++. .++++ .++.|++||+++ ...+..+. |...|.+++|++. .+|++++.||.|++||+..
T Consensus 277 ~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~ 356 (430)
T 2xyi_A 277 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 356 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTC
T ss_pred CCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcc
Confidence 68899999999987 56677 899999999998 45666666 8899999999953 4799999999999999986
Q ss_pred -----------CceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 242 -----------GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 242 -----------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
.+.+..+. +|...|++++|+|++.. +|++++.||.|+||++....
T Consensus 357 ~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~--------~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 357 EQSTEDAEDGPPELLFIHG-GHTAKISDFSWNPNEPW--------IICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp CCCHHHHHHCCTTEEEECC-CCSSCEEEEEECSSSTT--------EEEEEETTSEEEEEEECHHH
T ss_pred ccCccccccCCcceEEEcC-CCCCCceEEEECCCCCC--------EEEEEECCCCEEEeEccccc
Confidence 35666777 89999999999998752 79999999999999998753
No 107
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.8e-34 Score=243.76 Aligned_cols=279 Identities=12% Similarity=0.093 Sum_probs=209.2
Q ss_pred EEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceE-EEeeCC
Q 019326 33 TQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNL-FSTSAD 109 (343)
Q Consensus 33 ~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l-~s~~~d 109 (343)
.++..+..|..+|++++|+ +++|++|+.++ +++|++.+++....... ..+..+++.+.. +.+ ++++.|
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~---~~~~~~~~~~~~-----~~~~~~~~~d 80 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM---RHLSKVRMLHRT-----NYVAFVTGVK 80 (355)
T ss_dssp ---------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC---SCCCEEEECTTS-----SEEEEECSST
T ss_pred CCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec---CCeEEEEEcCCC-----CEEEEEECCc
Confidence 4455667899999999999 88899888775 78999998776655433 347778888877 455 678889
Q ss_pred CeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCC-ceeEEEEcCCcceEEEEeCCCCEEEE
Q 019326 110 GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG-RRSFYHKIGKEASLIKFDGSGEKFFM 188 (343)
Q Consensus 110 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (343)
++|++||..+++++..+. +...|.+++|+++. ++++ .++.|++||+.++ +.+..... +...+++++ ..+++
T Consensus 81 ~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~la~ 152 (355)
T 3vu4_A 81 EVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GLLVY 152 (355)
T ss_dssp TEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TEEEE
T ss_pred cEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEEc--cEEEE
Confidence 999999999999998887 67799999999873 4443 4789999999988 55444333 455677777 55555
Q ss_pred --E-eCCcEEEEEcccce---------------e-EEEec-CCcceEEeeecC-CCeEEEEeCCCc-EEEEECCCCceeE
Q 019326 189 --V-TEEKVGIHQAEDAK---------------L-LCELD-GKKRILCAAPGE-NGVLFTGGEDRS-ITAWDTNSGKVAY 246 (343)
Q Consensus 189 --~-~~~~i~~~d~~~~~---------------~-~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~-i~i~d~~~~~~~~ 246 (343)
+ .++.|++||+++++ + +..+. |..+|.+++|++ +.+|++|+.||+ |++||+++++.+.
T Consensus 153 ~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~ 232 (355)
T 3vu4_A 153 SNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVR 232 (355)
T ss_dssp EESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEE
T ss_pred eCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 4 78999999999865 1 44444 889999999994 679999999998 9999999999999
Q ss_pred Eeccc-ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccc-----------------c--c
Q 019326 247 CIEDA-HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAE-----------------A--K 306 (343)
Q Consensus 247 ~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-----------------~--~ 306 (343)
.+..+ |...|.+++|+|++. +|++++.|++|++||++.+...+...+.. . .
T Consensus 233 ~~~~g~h~~~v~~~~~s~~~~---------~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (355)
T 3vu4_A 233 EFRRGLDRADVVDMKWSTDGS---------KLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVD 303 (355)
T ss_dssp EEECTTCCSCEEEEEECTTSC---------EEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCC
T ss_pred EEEcCCCCCcEEEEEECCCCC---------EEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccC
Confidence 99744 999999999999887 99999999999999998763222111100 0 0
Q ss_pred cccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 307 TNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 307 ~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
...+...++|++++.+++.+..++..+.++.
T Consensus 304 ~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 304 KHVRGCKIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp TTCCCCEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred CCCCceEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 1123477999999999999998886655443
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-34 Score=248.92 Aligned_cols=270 Identities=13% Similarity=0.110 Sum_probs=217.6
Q ss_pred CCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe---eeeEeccCC----------------------------------
Q 019326 42 LSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS---SLGAIHHHE---------------------------------- 82 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~---------------------------------- 82 (343)
..++.+++|+ |++|++ +.++.|++||+.+++ .+..+..+.
T Consensus 4 ~~p~~~v~~s~dg~~l~~-~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFA-IIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEE-EETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEE-EeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999998 665554 467899999999998 555554320
Q ss_pred -------------------CCCeEEEEEeCCCCCCCCceE-EEeeCCCeEEEEECC--Ccceeeeee--eccccEEEEEE
Q 019326 83 -------------------SSSVTSLAFYTPQNLSVPRNL-FSTSADGFVSIFDAD--PFVLLTSVK--VHKKGVNDLAV 138 (343)
Q Consensus 83 -------------------~~~v~~l~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~--~~~~~~~~~--~~~~~v~~i~~ 138 (343)
...|.+++|+|++ ++| ++++.||.|++||+. +++.+..+. .|...|.+++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-----~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDE-----SRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISI 157 (450)
T ss_dssp -----------------CCCCCEEEEEECTTS-----SEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEE
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCC-----CEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEE
Confidence 2369999999999 675 899999999999998 888888886 56689999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCCcee-----EEEEcCCcceEEEEeCC---CCEEEEE-eCCcEEEEEcccceeEEEec
Q 019326 139 HHSGKLALTVGRDDCLAMVNLVRGRRS-----FYHKIGKEASLIKFDGS---GEKFFMV-TEEKVGIHQAEDAKLLCELD 209 (343)
Q Consensus 139 ~~~~~~l~~~~~d~~i~~wd~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~i~~~d~~~~~~~~~~~ 209 (343)
+|++++|++++.+|.+++|++.+++.. ....+...+.+++|+|+ +++++++ .|+.|++||+++++.+..+.
T Consensus 158 sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 158 AEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL 237 (450)
T ss_dssp CTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC
T ss_pred cCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee
Confidence 999999999999999999999887654 23445678999999999 8899999 89999999999998887743
Q ss_pred --CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEeccc------------------------ccccEEEEEEEe
Q 019326 210 --GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDA------------------------HSARVKGIVVLT 263 (343)
Q Consensus 210 --~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------------------h~~~v~~~~~~~ 263 (343)
|...|.+++|+++++|++++.|+.|++||+++++.+..+... +...|.+++++|
T Consensus 238 ~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 238 FGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred cCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 889999999996679999999999999999999988887611 235689999998
Q ss_pred cCCCCCCCCCCeEEEEEc-CCCcEEEEec--cCccccCCCcccccccccceeEEEcCCCCceeccccC
Q 019326 264 KNDGGSTAENPYLVASAS-SDGVICVWDV--RMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIG 328 (343)
Q Consensus 264 ~~~~~~~~~~~~~l~s~~-~dg~i~vwd~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~ 328 (343)
++. +|++++ .|+.|++|++ ..... ...+........|.+++|+|++.++..+..
T Consensus 318 ~~~---------~l~~~~~~d~~i~iw~~~~~~~~~--l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 318 NLP---------FVAFFVEATKCIIILEMSEKQKGD--LALKQIITFPYNVISLSAHNDEFQVTLDNK 374 (450)
T ss_dssp SSS---------EEEEEETTCSEEEEEEECSSSTTC--EEEEEEEECSSCEEEEEEETTEEEEEECCT
T ss_pred CCC---------EEEEEECCCCeEEEEEeccCCCCc--eeeccEeccCCceEEEEecCCcEEEEEecc
Confidence 877 888888 8999999999 43311 112223333477999999997655555443
No 109
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4e-34 Score=248.41 Aligned_cols=302 Identities=12% Similarity=0.058 Sum_probs=241.7
Q ss_pred EeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeee-----E
Q 019326 5 AGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLG-----A 77 (343)
Q Consensus 5 ~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~-----~ 77 (343)
.++.++.+.+|.+... .........+..+ ..+.+++|+ +.++++++.++.|++||+.+++... .
T Consensus 94 ~~~~~~~~~l~~~d~~--------~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~ 164 (433)
T 3bws_A 94 RKPEELNEKLIALDKE--------GITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEK 164 (433)
T ss_dssp SSGGGGTTCEEECCBT--------TCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHH
T ss_pred cccCCCceEEEEECCC--------CCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCccc
Confidence 3455564555555431 1123445555544 345689998 5677788889999999999998876 3
Q ss_pred eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEE-EeCCCeEEE
Q 019326 78 IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALT-VGRDDCLAM 156 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~~d~~i~~ 156 (343)
+..| ...|.+++|++++ .++++++.|+.|++||+++++.+..+..|...+.+++|+|+++.+++ ++.|+.|++
T Consensus 165 ~~~~-~~~v~~~~~~~~~-----~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~ 238 (433)
T 3bws_A 165 YKKK-LGFVETISIPEHN-----ELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISV 238 (433)
T ss_dssp HHTT-CCEEEEEEEGGGT-----EEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccc-CCceeEEEEcCCC-----EEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEE
Confidence 4466 7899999999988 79999999999999999999999999989999999999999988854 447999999
Q ss_pred EEccCCceeEEEEcCCcceEEEEeCCCCEEEEEe---------CCcEEEEEcccceeEEEecCCcceEEeeecC-CC-eE
Q 019326 157 VNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT---------EEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NG-VL 225 (343)
Q Consensus 157 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~-~l 225 (343)
||+++++..........+..++|+|+++.++++. ++.|++||+.+++....+.+...+.+++|++ ++ ++
T Consensus 239 ~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 318 (433)
T 3bws_A 239 IDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIY 318 (433)
T ss_dssp EETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEE
T ss_pred EECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEE
Confidence 9999998877777777899999999999988883 6799999999999888887778899999985 43 55
Q ss_pred EEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcC---------------CCcEEEEe
Q 019326 226 FTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASS---------------DGVICVWD 290 (343)
Q Consensus 226 ~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~---------------dg~i~vwd 290 (343)
++++.++.|++||+.+++.+..+. +...+.+++|+|++. +|++++. ||.|++||
T Consensus 319 ~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~---------~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d 387 (433)
T 3bws_A 319 VSDMCCSKIEVYDLKEKKVQKSIP--VFDKPNTIALSPDGK---------YLYVSCRGPNHPTEGYLKKGLVLGKVYVID 387 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSS---------EEEEEECCCCCTTTCTTSCCSSCCEEEEEE
T ss_pred EEecCCCEEEEEECCCCcEEEEec--CCCCCCeEEEcCCCC---------EEEEEecCCCccccccccccccceEEEEEE
Confidence 677899999999999998888876 778899999999887 7887776 57999999
Q ss_pred ccCccccCCCcccccccccceeEEEcCCCCceeccccC-CCCCCCccc
Q 019326 291 VRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIG-DSAPKGEEK 337 (343)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~-~~~~~~~~~ 337 (343)
+.+++.. ........+.+++++|++++++.... ++.+..++.
T Consensus 388 ~~~~~~~-----~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 388 TTTDTVK-----EFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp TTTTEEE-----EEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCCCcEE-----EEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 9886522 23333557999999999998876654 776655543
No 110
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.6e-34 Score=241.84 Aligned_cols=263 Identities=18% Similarity=0.202 Sum_probs=216.4
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++|+.||.|++||+... . ......+.+|..+|++++|+ +++|++++.||.|++||+.+++.+. +.
T Consensus 56 ~l~~~~~dg~i~iw~~~~~-------~---~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~ 124 (368)
T 3mmy_A 56 FLIAGSWANDVRCWEVQDS-------G---QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IA 124 (368)
T ss_dssp EEEEEETTSEEEEEEECTT-------S---CEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EE
T ss_pred EEEEECCCCcEEEEEcCCC-------C---ceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-ec
Confidence 4899999999999999851 1 23335667899999999998 7899999999999999999988776 45
Q ss_pred cCCCCCeEEEEE--eCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEE
Q 019326 80 HHESSSVTSLAF--YTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMV 157 (343)
Q Consensus 80 ~~~~~~v~~l~~--~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~w 157 (343)
.| ...|.+++| ++++ .+|++++.||.|++||+++++.+..+..+. .+.++.+.+ ..+++++.++.+.+|
T Consensus 125 ~~-~~~v~~~~~~~~~~~-----~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~~ 195 (368)
T 3mmy_A 125 QH-DAPVKTIHWIKAPNY-----SCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY--PMAVVATAERGLIVY 195 (368)
T ss_dssp EC-SSCEEEEEEEECSSC-----EEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEET--TEEEEEEGGGCEEEE
T ss_pred cc-cCceEEEEEEeCCCC-----CEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecC--CeeEEEeCCCcEEEE
Confidence 57 899999999 7887 789999999999999999999998888664 566666665 488899999999999
Q ss_pred EccCCceeEEEE---cCCcceEEEEeCCCCE----EEEE-eCCcEEEEEcccc---eeEEEec-CCc------------c
Q 019326 158 NLVRGRRSFYHK---IGKEASLIKFDGSGEK----FFMV-TEEKVGIHQAEDA---KLLCELD-GKK------------R 213 (343)
Q Consensus 158 d~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~~~-~~~~i~~~d~~~~---~~~~~~~-~~~------------~ 213 (343)
+++......... ......++.+.++... ++++ .++.+++|+++.. .....+. |.. +
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (368)
T 3mmy_A 196 QLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYA 275 (368)
T ss_dssp ECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECC
T ss_pred EeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccc
Confidence 998876543322 2355667777665554 7777 9999999999887 4455555 333 6
Q ss_pred eEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 214 ILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 214 i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
|.+++|++ +++|++|+.||.|++||+.+++.+..+. +|..+|++++|+|++. +|++++.|+..+.|++.
T Consensus 276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~g~---------~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 276 VNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE-QLDQPISACCFNHNGN---------IFAYASSYDWSKGHEFY 345 (368)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC-CCSSCEEEEEECTTSS---------CEEEEECCCSTTCGGGC
T ss_pred eEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec-CCCCCceEEEECCCCC---------eEEEEeccccccccccc
Confidence 99999995 5799999999999999999999999999 9999999999999988 99999999877666655
Q ss_pred Cc
Q 019326 293 MA 294 (343)
Q Consensus 293 ~~ 294 (343)
..
T Consensus 346 ~~ 347 (368)
T 3mmy_A 346 NP 347 (368)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 111
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-35 Score=247.65 Aligned_cols=251 Identities=17% Similarity=0.185 Sum_probs=207.3
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC--CcceeeeeeeccccEEEEEEecC--CCEEEE
Q 019326 72 SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD--PFVLLTSVKVHKKGVNDLAVHHS--GKLALT 147 (343)
Q Consensus 72 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~ 147 (343)
|+++..+.+| ...|++++|+|++ ++|++|+.||.|++||+. +.+.+..+.+|...|.+++|+++ +++|++
T Consensus 1 G~~~~~~~~h-~~~v~~~~~s~~~-----~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 74 (379)
T 3jrp_A 1 GSMVVIANAH-NELIHDAVLDYYG-----KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILAS 74 (379)
T ss_dssp ----CCEEEC-CCCEEEEEECSSS-----SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred CCccEEecCC-cccEEEEEEcCCC-----CEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEE
Confidence 3456778889 9999999999999 899999999999999997 66778889999999999999977 899999
Q ss_pred EeCCCeEEEEEccCCc--eeEEE-EcCCcceEEEEeCC--CCEEEEE-eCCcEEEEEcccceeE---EEecCCcceEEee
Q 019326 148 VGRDDCLAMVNLVRGR--RSFYH-KIGKEASLIKFDGS--GEKFFMV-TEEKVGIHQAEDAKLL---CELDGKKRILCAA 218 (343)
Q Consensus 148 ~~~d~~i~~wd~~~~~--~~~~~-~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~d~~~~~~~---~~~~~~~~i~~~~ 218 (343)
++.||.|++||+++++ ..... .+...+.+++|+|+ +.+++++ .++.|++||+++.... ....|...+.+++
T Consensus 75 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~ 154 (379)
T 3jrp_A 75 CSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS 154 (379)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEE
T ss_pred eccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEE
Confidence 9999999999999986 33333 34578999999999 8999999 8999999999987432 2234888999999
Q ss_pred ecC--------------CCeEEEEeCCCcEEEEECCCCc----eeEEecccccccEEEEEEEec---CCCCCCCCCCeEE
Q 019326 219 PGE--------------NGVLFTGGEDRSITAWDTNSGK----VAYCIEDAHSARVKGIVVLTK---NDGGSTAENPYLV 277 (343)
Q Consensus 219 ~~~--------------~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~h~~~v~~~~~~~~---~~~~~~~~~~~~l 277 (343)
|++ +.++++++.||.|++||++++. ....+. +|...|.+++|+|+ +. +|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~---------~l 224 (379)
T 3jrp_A 155 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRS---------YL 224 (379)
T ss_dssp ECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSE---------EE
T ss_pred EcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe-cccCcEeEEEECCCCCCCC---------eE
Confidence 986 6799999999999999998765 445666 89999999999998 55 99
Q ss_pred EEEcCCCcEEEEeccCccccCCCc-ccccccccceeEEEcCCCCceeccccCCCCCCCcccc
Q 019326 278 ASASSDGVICVWDVRMAIKEKPLP-LAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 278 ~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
++++.||.|++||++++....... .....+...|.+++|+|++.+++.+..++.++.++..
T Consensus 225 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 225 ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred EEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 999999999999999863221111 1222356679999999999999999999987766643
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4.6e-33 Score=241.75 Aligned_cols=266 Identities=13% Similarity=0.082 Sum_probs=224.5
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
+++++.++.|++||+.+ ++.........+.+|...|.+++|+ +.++++++.|+.|++||+++++.+..+..
T Consensus 137 ~~~~~~~~~i~~~d~~~-------g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~ 209 (433)
T 3bws_A 137 AIPLLEDEGMDVLDINS-------GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDL 209 (433)
T ss_dssp EEEBTTSSSEEEEETTT-------CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC
T ss_pred EEEeCCCCeEEEEECCC-------CeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcC
Confidence 56677788999999886 3333222222556899999999997 88999999999999999999999999988
Q ss_pred CCCCCeEEEEEeCCCCCCCCceE-EEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEe--------CC
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNL-FSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVG--------RD 151 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--------~d 151 (343)
| ...+.+++|+|++ +.+ ++++.|+.|++||+++++.+..+..+ ..+.+++|+|+++.+++++ .|
T Consensus 210 ~-~~~~~~~~~~~~~-----~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 210 T-GKWSKILLYDPIR-----DLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp S-SSSEEEEEEETTT-----TEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred C-CCCeeEEEEcCCC-----CEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 8 8899999999998 566 55568999999999998888877754 4589999999999999888 58
Q ss_pred CeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEEEE
Q 019326 152 DCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLFTG 228 (343)
Q Consensus 152 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~ 228 (343)
+.|++||+++++..........+..++|+|+++.++++ .++.+.+||+.+++....+.+...+.++++++ +++++++
T Consensus 283 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 362 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVS 362 (433)
T ss_dssp EEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEE
T ss_pred CeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEE
Confidence 89999999999887777777788899999999866544 89999999999999999998888999999985 5677777
Q ss_pred eC---------------CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc-CCCcEEEEecc
Q 019326 229 GE---------------DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS-SDGVICVWDVR 292 (343)
Q Consensus 229 ~~---------------dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~-~dg~i~vwd~~ 292 (343)
+. ||.|++||+.+++.+..+. +...+.+++|+|++. +|++++ .|+.|++|+++
T Consensus 363 ~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~---------~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 363 CRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE--AGNQPTGLDVSPDNR---------YLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp ECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSC---------EEEEEETTTTEEEEEEET
T ss_pred ecCCCccccccccccccceEEEEEECCCCcEEEEec--CCCCCceEEEcCCCC---------EEEEEECCCCeEEEEEec
Confidence 65 5799999999999988887 356889999999887 887776 49999999987
Q ss_pred C
Q 019326 293 M 293 (343)
Q Consensus 293 ~ 293 (343)
.
T Consensus 432 ~ 432 (433)
T 3bws_A 432 G 432 (433)
T ss_dssp T
T ss_pred C
Confidence 4
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.5e-33 Score=239.13 Aligned_cols=271 Identities=11% Similarity=0.027 Sum_probs=195.5
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec----------------------CceEEEee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS----------------------GTAAASGG 59 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----------------------~~~l~s~~ 59 (343)
.|++++.++.|.+|+........ ........+..+ .|..++..+.|+ +.+|++++
T Consensus 32 ~l~a~g~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~~ 108 (393)
T 4gq1_A 32 NLLAIGHDTGITIYCASEEQTPG--STGLTLQELFTI-QTGLPTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLFLACVC 108 (393)
T ss_dssp TEEEEEESSEEEEEEEEECCSSS--CCSEEEEEEEEE-ECSSCEEEEEECTTCEEECC----------CCEEEEEEEEEE
T ss_pred CEEEEECCCCEEEEECCCCCccc--ccccceeeeEEE-ecCCCeeeEeecCCccccccccCCCcceeecCCCCCEEEEEe
Confidence 36677788999999886532211 112223333332 234445554443 45799999
Q ss_pred CCCeEEEEEcCCCeeee-----EeccCCCCCeEEEEEeC--------CCCCCCCceEEEeeCCCeEEEEECCCcceeeee
Q 019326 60 TDDTIHLYDLSTSSSLG-----AIHHHESSSVTSLAFYT--------PQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV 126 (343)
Q Consensus 60 ~dg~i~iwd~~~~~~~~-----~~~~~~~~~v~~l~~~~--------~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 126 (343)
.|++|++||.++++... .+.+| ...|++++|+| ++ ++|++|+.|++|+|||+.++.++..+
T Consensus 109 ~d~~v~lw~~~~~~~~~~~~~~~~~gH-~~~v~~v~~~p~~~~~~~~d~-----~~las~s~D~tv~~Wd~~~~~~~~~~ 182 (393)
T 4gq1_A 109 QDNTVRLIITKNETIITQHVLGGKSGH-HNFVNDIDIADVYSADNRLAE-----QVIASVGDDCTLIIWRLTDEGPILAG 182 (393)
T ss_dssp TTSCEEEEEEETTEEEEEEEECTTTSC-SSCEEEEEEEEEECTTCSEEE-----EEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred CCCcEEEEECCCCccceeeeecccCCC-CCceEEEEEccccccccCCCC-----CEEEEEECCCeEEEEECCCCceeeee
Confidence 99999999999886543 35678 99999999998 55 79999999999999999888888888
Q ss_pred eeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEE--------------------------EcCCcceEEEE
Q 019326 127 KVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYH--------------------------KIGKEASLIKF 179 (343)
Q Consensus 127 ~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~--------------------------~~~~~~~~~~~ 179 (343)
..|...|.+++|+|++ .+|++++.|++|++||+++++..... .+...+..+.|
T Consensus 183 ~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~ 262 (393)
T 4gq1_A 183 YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRW 262 (393)
T ss_dssp EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEE
T ss_pred cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeee
Confidence 8899999999999987 58999999999999999987643221 12245667787
Q ss_pred e-CCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceE------------------Eeeec--CC-CeEEEEeCCCcEE
Q 019326 180 D-GSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRIL------------------CAAPG--EN-GVLFTGGEDRSIT 235 (343)
Q Consensus 180 ~-~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~------------------~~~~~--~~-~~l~~~~~dg~i~ 235 (343)
. ++++.++++ .|+.+++||+..++....+. +...+. ...+. .+ .++++|+.||.|+
T Consensus 263 ~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~ 342 (393)
T 4gq1_A 263 IGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQ 342 (393)
T ss_dssp ETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEE
T ss_pred ecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEE
Confidence 6 799999999 89999999998876555443 211111 12222 23 3667788999999
Q ss_pred EEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 236 i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+||+.+++....+. .|..+|.+++|+|++. +||+++.|| +.+|.+.
T Consensus 343 lwd~~~~~~~~~~~-~~~~~V~svafspdG~---------~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 343 LINTYEKDSNSIPI-QLGMPIVDFCWHQDGS---------HLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEETTCTTCCEEEE-ECSSCEEEEEECTTSS---------EEEEEESSE-EEEEEEG
T ss_pred EEECCCCcEEEEec-CCCCcEEEEEEcCCCC---------EEEEEeCCC-eEEEEEe
Confidence 99999999888887 8999999999999988 999998766 6666664
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-34 Score=239.47 Aligned_cols=257 Identities=11% Similarity=0.031 Sum_probs=200.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcC---------CC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLS---------TS 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~---------~~ 72 (343)
.|++|+.||.|++||+.. ++. +..+. ...|.++.|+.. +++++.|++|++|+.. ++
T Consensus 50 ~l~sg~~Dg~v~iwd~~~-------~~~-----~~~~~--~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLKD-------SKT-----ITTIT--TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp EEEEEEETTEEEEEEESS-------SSC-----EEEEE--EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred EEEEECCCCcEEEEECCC-------CcE-----EEEEe--cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCc
Confidence 489999999999999987 222 22222 456777778755 9999999999999765 44
Q ss_pred eeeeEec-cCCCCCeEEEEEeC--CCCCCCCceEEEeeCCCeEEEEECCCcceeeeeee-ccccEEEEEEecCCCEEEEE
Q 019326 73 SSLGAIH-HHESSSVTSLAFYT--PQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKV-HKKGVNDLAVHHSGKLALTV 148 (343)
Q Consensus 73 ~~~~~~~-~~~~~~v~~l~~~~--~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~~~ 148 (343)
+.+..+. .| ...|.+++|+| ++ +++++++.||+|++||+++++.+..... |...|.+++|+|++.+|++|
T Consensus 115 ~~~~~~~~~~-~~~v~~~~~~~~~~~-----~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 115 KVLREIEVDS-ANEIIYMYGHNEVNT-----EYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp CEEEEEECCC-SSCEEEEECCC---C-----CEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred ceeEEeecCC-CCCEEEEEcCCCCCC-----CEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 5455554 44 68899999999 88 7999999999999999999888766643 45589999999999999999
Q ss_pred eCCCeEEEEEccCCcee-EEEE--cCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec----CCcce--EEeee
Q 019326 149 GRDDCLAMVNLVRGRRS-FYHK--IGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD----GKKRI--LCAAP 219 (343)
Q Consensus 149 ~~d~~i~~wd~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~----~~~~i--~~~~~ 219 (343)
+.||.|++||+++++.. .... +...+.+++|+|++.+++++.++.|++||+++.+....+. +..++ .+++|
T Consensus 189 ~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI 268 (343)
T ss_dssp CTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEE
T ss_pred cCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEE
Confidence 99999999999999876 4443 4688999999999999999977799999999987665443 22233 36888
Q ss_pred c-CCCeEEEEeC-CCcEEEEECCCCceeEEecccccccEEEEEEEe---cCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 220 G-ENGVLFTGGE-DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLT---KNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 220 ~-~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
+ ++.+|++++. |+.|++|++.+....... .++..+.|.+ +.. .+++++.||.+.++-...
T Consensus 269 ~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---------~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 269 DDSGKNMIAYSNESNSLTIYKFDKKTKNWTK-----DEESALCLQSDTADFT---------DMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCSEEE-----EEEEECCC----CCCC---------EEEEEEETTEEEEEEECS
T ss_pred CCCCCEEEEecCCCCcEEEEEEcccccceEe-----cCceeEecCccccccc---------eeEEEecCCceEEEEecC
Confidence 8 4678999888 999999999766544333 4667777777 443 899999999999886543
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-32 Score=239.50 Aligned_cols=237 Identities=11% Similarity=0.067 Sum_probs=199.4
Q ss_pred cCCCCCeEEEEec--CceE-EEeeCCCeEEEEEcC--CCeeeeEec--cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCe
Q 019326 39 PAHLSPITTVAVS--GTAA-ASGGTDDTIHLYDLS--TSSSLGAIH--HHESSSVTSLAFYTPQNLSVPRNLFSTSADGF 111 (343)
Q Consensus 39 ~~h~~~v~~l~~~--~~~l-~s~~~dg~i~iwd~~--~~~~~~~~~--~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 111 (343)
++|.+.|++++|+ +++| ++|+.||.|++||+. +++.+..+. .+ ...|.+++|+|++ ++|++|+.+|.
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~~-----~~l~~~~~~g~ 172 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF-SKRPNAISIAEDD-----TTVIIADKFGD 172 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC-SSCEEEEEECTTS-----SEEEEEETTSE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccC-CCCceEEEEcCCC-----CEEEEEeCCCc
Confidence 3566789999999 7775 899999999999999 888888876 45 6889999999998 89999999999
Q ss_pred EEEEECCCcceee----eeeeccccEEEEEEecC---CCEEEEEeCCCeEEEEEccCCceeEEE--EcCCcceEEEEeCC
Q 019326 112 VSIFDADPFVLLT----SVKVHKKGVNDLAVHHS---GKLALTVGRDDCLAMVNLVRGRRSFYH--KIGKEASLIKFDGS 182 (343)
Q Consensus 112 i~iwd~~~~~~~~----~~~~~~~~v~~i~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~--~~~~~~~~~~~~~~ 182 (343)
|++|++.+++... .+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+... .+...+.+++|+ +
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d 251 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-K 251 (450)
T ss_dssp EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-S
T ss_pred EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-C
Confidence 9999998776554 78889999999999999 999999999999999999998876553 356789999999 9
Q ss_pred CCEEEEE-eCCcEEEEEcccceeEEEecC--------------------------CcceEEeeecC-CCeEEEEe-CCCc
Q 019326 183 GEKFFMV-TEEKVGIHQAEDAKLLCELDG--------------------------KKRILCAAPGE-NGVLFTGG-EDRS 233 (343)
Q Consensus 183 ~~~~~~~-~~~~i~~~d~~~~~~~~~~~~--------------------------~~~i~~~~~~~-~~~l~~~~-~dg~ 233 (343)
+.+++++ .|+.|++||+++++.+..+.. ...+.++.+++ ++++++++ .++.
T Consensus 252 ~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~ 331 (450)
T 2vdu_B 252 DYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKC 331 (450)
T ss_dssp TTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCe
Confidence 9999999 899999999999998887752 24578888884 57888888 8999
Q ss_pred EEEEEC--CCC---ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcC-------CCcEEEEeccCc
Q 019326 234 ITAWDT--NSG---KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASS-------DGVICVWDVRMA 294 (343)
Q Consensus 234 i~i~d~--~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~-------dg~i~vwd~~~~ 294 (343)
|++|++ .++ +.+..+. .| ..|.+++|+|++ ++++.+. +..|.+|.++..
T Consensus 332 i~iw~~~~~~~~~l~~~~~~~-~~-~~v~~~~~~~~~----------~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 332 IIILEMSEKQKGDLALKQIIT-FP-YNVISLSAHNDE----------FQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEEEECSSSTTCEEEEEEEE-CS-SCEEEEEEETTE----------EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEEEEeccCCCCceeeccEec-cC-CceEEEEecCCc----------EEEEEecccCCCCCCcceEEEEEEcC
Confidence 999999 555 6677777 66 889999999954 5555433 556899987643
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-34 Score=244.30 Aligned_cols=281 Identities=8% Similarity=-0.053 Sum_probs=212.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEec-c
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIH-H 80 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~ 80 (343)
.+|+++.|++|+ |... . ..+.+|...|.+++|++.- .++ .|++.+++....+. .
T Consensus 29 ~iASas~D~TV~--d~~~-------~--------~~l~gh~~~v~~V~FsPdg-----~~~---~~~~~~~~~~~~~~~~ 83 (588)
T 2j04_A 29 LYLTTFPDISIG--QPKY-------A--------KDINCNSKNLFHVKEFPLE-----FEN---KLDFELAQQNGLLNSQ 83 (588)
T ss_dssp EEEECSSSEEEE--EECC-------C--------SCCSSBGGGTEEEEEECCC-----CCC---TTTTSCCCSSCSSTTS
T ss_pred EEEEEcCCceee--cccc-------c--------ceecCCCccEEEEEECCCC-----Ccc---eEEEEeCCCceEeecC
Confidence 578999999999 6433 1 2236899999999998321 344 44444444333333 4
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccc-----cEEEEEEecCCCEEEEEeCCCeEE
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKK-----GVNDLAVHHSGKLALTVGRDDCLA 155 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~v~~i~~~~~~~~l~~~~~d~~i~ 155 (343)
| ...|.+++|+|++ ++|++++.||.|++||.++ ++..+. |.. .|.+++|+|+|++|++|+.||+|+
T Consensus 84 ~-~~~V~~vawSPdG-----~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 84 P-VCYPRVCKPSPID-----DWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp C-SCCEEEEEECSSS-----SCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred C-CCcEEEEEECCCC-----CEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 5 7899999999999 8999999999999999654 666666 665 599999999999999999999999
Q ss_pred EEEccCCce-------eEEEE-----cCCcceEEEEeCCCCEEEEEeCCcEEEEEccccee---EEEe--cCCcceEEee
Q 019326 156 MVNLVRGRR-------SFYHK-----IGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKL---LCEL--DGKKRILCAA 218 (343)
Q Consensus 156 ~wd~~~~~~-------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~~~--~~~~~i~~~~ 218 (343)
+||+.++.. +.... +...|.+++|+|++ .++++.|+.+++||+..++. ..++ .|...|.+++
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva 233 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLK 233 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEE
Confidence 999998752 23322 23589999999999 44444999999999988774 3455 3668899999
Q ss_pred ecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEE--EecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc-
Q 019326 219 PGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVV--LTKNDGGSTAENPYLVASASSDGVICVWDVRMAI- 295 (343)
Q Consensus 219 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~- 295 (343)
|+ ++.+++++ ++.|++||+.+++...... +|...|.++++ +|++. .|+++++||+ ++|..+.-.
T Consensus 234 Fs-g~~LASa~-~~tIkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~---------~La~a~edG~-klw~~d~~~~ 300 (588)
T 2j04_A 234 IV-DYKVVLTC-PGYVHKIDLKNYSISSLKT-GSLENFHIIPLNHEKEST---------ILLMSNKTSY-KVLLEDELHV 300 (588)
T ss_dssp EE-TTEEEEEC-SSEEEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCE---------EEEECSSCEE-EEEESSSEEE
T ss_pred EE-CCEEEEEe-CCeEEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCC---------EEEEEcCCCC-EEEeeccEEE
Confidence 98 78888887 6999999999877644444 79999999999 87776 9999999999 999974210
Q ss_pred -----------------ccCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 296 -----------------KEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 296 -----------------~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
.....++..+.....|.++++||||.+++.+..-+
T Consensus 301 spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~i~ 352 (588)
T 2j04_A 301 TADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYDME 352 (588)
T ss_dssp ECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEEEE
T ss_pred CCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEecc
Confidence 00001122333344699999999999888766554
No 117
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.9e-32 Score=229.39 Aligned_cols=234 Identities=19% Similarity=0.206 Sum_probs=197.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec----CceEEEeeCCCeEEEEEcCCC-----
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS----GTAAASGGTDDTIHLYDLSTS----- 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~l~s~~~dg~i~iwd~~~~----- 72 (343)
.|++|+.||.|++||+... .........+.+|..+|++++|+ +++|++|+.||.|++||+.++
T Consensus 25 ~l~~~~~dg~i~iw~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~ 96 (351)
T 3f3f_A 25 HVATCSSDQHIKVFKLDKD--------TSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECS 96 (351)
T ss_dssp EEEEEETTSEEEEEEECSS--------SCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTS
T ss_pred EEEEeeCCCeEEEEECCCC--------CCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccc
Confidence 4899999999999999862 12245667778999999999997 679999999999999999987
Q ss_pred ----eeeeEeccCCCCCeEEEEEeCC--CCCCCCceEEEeeCCCeEEEEECCCcceeeeee-------------eccccE
Q 019326 73 ----SSLGAIHHHESSSVTSLAFYTP--QNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK-------------VHKKGV 133 (343)
Q Consensus 73 ----~~~~~~~~~~~~~v~~l~~~~~--~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------~~~~~v 133 (343)
+.+..+..| ...|.+++|+|+ + .+|++++.||.|++||+++++.+..+. .|...+
T Consensus 97 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~-----~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (351)
T 3f3f_A 97 GRRWNKLCTLNDS-KGSLYSVKFAPAHLG-----LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSD 170 (351)
T ss_dssp SCSEEEEEEECCC-SSCEEEEEECCGGGC-----SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCC
T ss_pred ccCcceeeeeccc-CCceeEEEEcCCCCC-----cEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccce
Confidence 567788888 899999999998 7 799999999999999998877665544 477899
Q ss_pred EEEEEecC---CCEEEEEeCCCeEEEEEccCCceeEEEE---cCCcceEEEEeCCC----CEEEEE-eCCcEEEEEcccc
Q 019326 134 NDLAVHHS---GKLALTVGRDDCLAMVNLVRGRRSFYHK---IGKEASLIKFDGSG----EKFFMV-TEEKVGIHQAEDA 202 (343)
Q Consensus 134 ~~i~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~-~~~~i~~~d~~~~ 202 (343)
.+++|+|+ +.++++++.++.+.+|+...++...... +...+.+++|+|++ ++++++ .|+.|++||++.+
T Consensus 171 ~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 171 FCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred eEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 99999997 8999999999999888887776533333 45689999999998 788888 8999999999875
Q ss_pred ----------------------------------------------eeEEEec-CCcceEEeeec-CCCeEEEEeCCCcE
Q 019326 203 ----------------------------------------------KLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSI 234 (343)
Q Consensus 203 ----------------------------------------------~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i 234 (343)
+.+..+. |...|++++|+ ++++|++|+.||.|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v 330 (351)
T 3f3f_A 251 LSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKV 330 (351)
T ss_dssp C---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred cCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcE
Confidence 4455555 78899999998 46799999999999
Q ss_pred EEEECCCCceeEEec
Q 019326 235 TAWDTNSGKVAYCIE 249 (343)
Q Consensus 235 ~i~d~~~~~~~~~~~ 249 (343)
++||+.+++.+..+.
T Consensus 331 ~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 331 RLWKATYSNEFKCMS 345 (351)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEecCcCcchhhee
Confidence 999999887665544
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.1e-31 Score=229.93 Aligned_cols=261 Identities=13% Similarity=0.087 Sum_probs=218.6
Q ss_pred ceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceE-EEeeCCCeEEEEECCCcceeeeeeeccc
Q 019326 53 TAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNL-FSTSADGFVSIFDADPFVLLTSVKVHKK 131 (343)
Q Consensus 53 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 131 (343)
..+++++.|+.|++||+.+++.+..+..+ ..+.+++|+|++ +++ ++++.|+.|++||+.+++.+..+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg-----~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~- 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG--SNPMGAVISPDG-----TKVYVANAHSNDVSIIDTATNNVIATVPAGS- 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS--SSEEEEEECTTS-----SEEEEEEGGGTEEEEEETTTTEEEEEEECSS-
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC--CCcceEEECCCC-----CEEEEECCCCCeEEEEECCCCeEEEEEECCC-
Confidence 36788999999999999999999998877 569999999999 555 677799999999999999988887555
Q ss_pred cEEEEEEecCCCEEEEE-eCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEE-EEE-eCCcEEEEEcccceeEEEe
Q 019326 132 GVNDLAVHHSGKLALTV-GRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKF-FMV-TEEKVGIHQAEDAKLLCEL 208 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~i~~~d~~~~~~~~~~ 208 (343)
.+.+++|+|++++|+++ +.++.|++||+.+++..........+..++|+|+++.+ +++ .++.|++||+.+++....+
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 154 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV 154 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 89999999999987554 46799999999999988888888889999999999988 455 7999999999999999988
Q ss_pred cCCcceEEeeecC-CCeE-EEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc---CC
Q 019326 209 DGKKRILCAAPGE-NGVL-FTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS---SD 283 (343)
Q Consensus 209 ~~~~~i~~~~~~~-~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~---~d 283 (343)
.....+.++++++ ++.+ ++++.++.|++||+++++....+. +...+.+++|+|++. +|++++ .|
T Consensus 155 ~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~---------~l~~~~~~~~~ 223 (391)
T 1l0q_A 155 SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK--VEAAPSGIAVNPEGT---------KAYVTNVDKYF 223 (391)
T ss_dssp ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSEEEEEEECTTSS---------EEEEEEECSSC
T ss_pred ecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe--cCCCccceEECCCCC---------EEEEEecCcCC
Confidence 8777889999984 4555 677889999999999998888776 667899999999887 888877 68
Q ss_pred CcEEEEeccCccccCCCcccccccccceeEEEcCCCCcee-ccccCCCCCCCccc
Q 019326 284 GVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFK-RPQIGDSAPKGEEK 337 (343)
Q Consensus 284 g~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~-~~~~~~~~~~~~~~ 337 (343)
+.|++||++++.. +........+.+++++|+++++ +.+..++.++.++.
T Consensus 224 ~~v~~~d~~~~~~-----~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 224 NTVSMIDTGTNKI-----TARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp CEEEEEETTTTEE-----EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CcEEEEECCCCeE-----EEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 9999999998642 2233334568899999999877 55566776665544
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=3.8e-32 Score=220.56 Aligned_cols=261 Identities=12% Similarity=0.059 Sum_probs=190.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecC---ceEEEeeCCCeE-EEEEcC--CC---
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSG---TAAASGGTDDTI-HLYDLS--TS--- 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~~~dg~i-~iwd~~--~~--- 72 (343)
.+++++. ..|++|+... . .+.+.++++.+|..+|..+.+.+ +++.++-..=.+ .++.+. ..
T Consensus 56 ~~~~~~~-~~v~lw~~~~-------~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~ 125 (356)
T 2w18_A 56 CIITACE-DVVSLWKALD-------A--WQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDES 125 (356)
T ss_dssp EEEEEES-SEEEEEEESS-------S--SBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------
T ss_pred EEEEecc-ceEEEcccCC-------C--ccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccc
Confidence 3455555 7999999986 2 44678899999999999999982 333332211111 111111 01
Q ss_pred -eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee--CCCeEEEEEC-CCcceeeeeeeccccEEEEEEec---CCCEE
Q 019326 73 -SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS--ADGFVSIFDA-DPFVLLTSVKVHKKGVNDLAVHH---SGKLA 145 (343)
Q Consensus 73 -~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~--~dg~i~iwd~-~~~~~~~~~~~~~~~v~~i~~~~---~~~~l 145 (343)
.....-.+| ...|..+ +++ +++.+++ .|+.|++|++ .+++.+..+.+|...+..++|++ ++..|
T Consensus 126 ~~~~l~s~g~-~~~v~~l---~~g-----~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~L 196 (356)
T 2w18_A 126 EKQVLLKSGN-IKAVLGL---TKR-----RLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEAL 196 (356)
T ss_dssp CCEEEEEEEE-EEEEEEE---TTT-----EEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEE
T ss_pred cccEEEeCCC-eEEEEec---CCC-----cEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceE
Confidence 111111233 3344443 455 4555533 5999999999 55888899999999999999999 77999
Q ss_pred EEEeCCCeEEEEEccCCceeEEEEcC----CcceEEEEeCCCCEEEE------------E-eCCcEEEEEcccceeEEEe
Q 019326 146 LTVGRDDCLAMVNLVRGRRSFYHKIG----KEASLIKFDGSGEKFFM------------V-TEEKVGIHQAEDAKLLCEL 208 (343)
Q Consensus 146 ~~~~~d~~i~~wd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~------------~-~~~~i~~~d~~~~~~~~~~ 208 (343)
++++.|++|++||+++++.+..+... ..+.+++|+|++..+++ + .|+++++||..+++.+..+
T Consensus 197 aSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 197 LGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE
T ss_pred EEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence 99999999999999999988877632 35677899999998743 4 6889999999999887765
Q ss_pred c------CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEE-EEEEEecCCCCCCCCCCeEEEEEc
Q 019326 209 D------GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVK-GIVVLTKNDGGSTAENPYLVASAS 281 (343)
Q Consensus 209 ~------~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~~~~~~~~l~s~~ 281 (343)
. |...+.+..+ .+.++++|+.|++|+|||+.+++.+.++. +|...+. .++|+|++. +|++|+
T Consensus 277 ~~~~p~Gh~~~~lsg~~-sg~~lASgS~DgTIkIWDl~tGk~l~tL~-gH~~~vvs~vafSPDG~---------~LaSGS 345 (356)
T 2w18_A 277 LYCLPPGQAGRFLEGDV-KDHCAAAILTSGTIAIWDLLLGQCTALLP-PVSDQHWSFVKWSGTDS---------HLLAGQ 345 (356)
T ss_dssp EECCCTTCCCCEEEEEE-ETTEEEEEETTSCEEEEETTTCSEEEEEC-CC--CCCCEEEECSSSS---------EEEEEC
T ss_pred EeeccCCCcceeEcccc-CCCEEEEEcCCCcEEEEECCCCcEEEEec-CCCCCeEEEEEECCCCC---------EEEEEE
Confidence 2 3334444444 36789999999999999999999999998 8877655 689999988 999999
Q ss_pred CCCcEEEEecc
Q 019326 282 SDGVICVWDVR 292 (343)
Q Consensus 282 ~dg~i~vwd~~ 292 (343)
.|++|+|||+.
T Consensus 346 ~D~TIklWd~~ 356 (356)
T 2w18_A 346 KDGNIFVYHYS 356 (356)
T ss_dssp TTSCEEEEEEC
T ss_pred CCCcEEEecCC
Confidence 99999999963
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=253.25 Aligned_cols=247 Identities=17% Similarity=0.173 Sum_probs=205.0
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC--CcceeeeeeeccccEEEEEEecC--CCEEEEEeCC
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD--PFVLLTSVKVHKKGVNDLAVHHS--GKLALTVGRD 151 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~~~d 151 (343)
..+.+| .+.|++++|+|++ ++|++|+.||.|++||+. +++.+..+.+|.+.|.+++|+|+ +++|++++.|
T Consensus 3 ~~l~gH-~~~V~~l~~s~dg-----~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D 76 (753)
T 3jro_A 3 VIANAH-NELIHDAVLDYYG-----KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD 76 (753)
T ss_dssp -----C-CCCEEEECCCSSS-----CCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT
T ss_pred eecccC-cceeEEEEECCCC-----CeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC
Confidence 456788 9999999999998 799999999999999997 66788889999999999999988 8999999999
Q ss_pred CeEEEEEccCCce--eE-EEEcCCcceEEEEeCC--CCEEEEE-eCCcEEEEEccccee---EEEecCCcceEEeeecC-
Q 019326 152 DCLAMVNLVRGRR--SF-YHKIGKEASLIKFDGS--GEKFFMV-TEEKVGIHQAEDAKL---LCELDGKKRILCAAPGE- 221 (343)
Q Consensus 152 ~~i~~wd~~~~~~--~~-~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~d~~~~~~---~~~~~~~~~i~~~~~~~- 221 (343)
|.|++||+.+++. .. ...+...+.+++|+|+ +..++++ .++.|++||++++.. .....|...+.++.|++
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCc
Confidence 9999999999862 22 2335678999999999 9999999 899999999988732 22334888999999986
Q ss_pred -------------CCeEEEEeCCCcEEEEECCCC----ceeEEecccccccEEEEEEEec---CCCCCCCCCCeEEEEEc
Q 019326 222 -------------NGVLFTGGEDRSITAWDTNSG----KVAYCIEDAHSARVKGIVVLTK---NDGGSTAENPYLVASAS 281 (343)
Q Consensus 222 -------------~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~h~~~v~~~~~~~~---~~~~~~~~~~~~l~s~~ 281 (343)
+.++++|+.||.|++||++++ .....+. +|..+|++++|+|+ +. +|++++
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~~~~~~---------~l~s~s 226 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRS---------YLASVS 226 (753)
T ss_dssp C---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSE---------EEEEEE
T ss_pred ccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec-CCCCcEEEEEeccCCCCCC---------EEEEEe
Confidence 579999999999999999877 4556677 89999999999998 55 999999
Q ss_pred CCCcEEEEeccCccccCCCc-ccccccccceeEEEcCCCCceeccccCCCCCCCcccc
Q 019326 282 SDGVICVWDVRMAIKEKPLP-LAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEKA 338 (343)
Q Consensus 282 ~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~~ 338 (343)
.||.|++||++++....... .....+...|.+++|+|++.+++.+..++.++.++..
T Consensus 227 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred cCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 99999999999863221112 2223456679999999999999999999988777654
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-33 Score=232.85 Aligned_cols=250 Identities=8% Similarity=0.041 Sum_probs=190.7
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC---------Ccce
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD---------PFVL 122 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~---------~~~~ 122 (343)
+..|++|+.||.|++||+.+++.+..+. ...|.++.|+| . +++++.|++|++|+.. +++.
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~-------~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHP-------A-IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCC-------S-EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCC-------c-eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 7889999999999999999998888776 24566777765 2 8999999999999765 4444
Q ss_pred eeeee-eccccEEEEEEec--CCCEEEEEeCCCeEEEEEccCCceeEEEE--cCCcceEEEEeCCCCEEEEE-eCCcEEE
Q 019326 123 LTSVK-VHKKGVNDLAVHH--SGKLALTVGRDDCLAMVNLVRGRRSFYHK--IGKEASLIKFDGSGEKFFMV-TEEKVGI 196 (343)
Q Consensus 123 ~~~~~-~~~~~v~~i~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~i~~ 196 (343)
+..+. .|...|.+++|+| +++++++++.||+|++||+++++...... ....+.+++|+|++.+++++ .|+.|++
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 44444 5668899999999 99999999999999999999998865543 33569999999999999998 9999999
Q ss_pred EEcccceeE-EEec--CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecc--cccccEE--EEEEEecCCCC
Q 019326 197 HQAEDAKLL-CELD--GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIED--AHSARVK--GIVVLTKNDGG 268 (343)
Q Consensus 197 ~d~~~~~~~-~~~~--~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~h~~~v~--~~~~~~~~~~~ 268 (343)
||+++++.. ..+. |..+|.+++|++ +.+|++++ ++.|++||+++++.+..+.. .|...+. +++|+|++.
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-- 273 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK-- 273 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS--
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCC--
Confidence 999998877 5555 689999999995 56888888 55999999999877655441 2444444 699999887
Q ss_pred CCCCCCeEEEEEcC-CCcEEEEeccCccccCCCcccccccccceeEEEcCC---CCceeccccCCC
Q 019326 269 STAENPYLVASASS-DGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSS---TKSFKRPQIGDS 330 (343)
Q Consensus 269 ~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~~~~~~~~~ 330 (343)
+|++++. |+.|++|++....+.. .. .++.++++++ +...++....++
T Consensus 274 -------~l~~~s~~d~~i~v~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~l~~~~~d~ 324 (343)
T 3lrv_A 274 -------NMIAYSNESNSLTIYKFDKKTKNW-----TK---DEESALCLQSDTADFTDMDVVCGDG 324 (343)
T ss_dssp -------EEEEEETTTTEEEEEEECTTTCSE-----EE---EEEEECCC----CCCCEEEEEEETT
T ss_pred -------EEEEecCCCCcEEEEEEcccccce-----Ee---cCceeEecCccccccceeEEEecCC
Confidence 9999988 9999999997653111 11 3355555555 554554444444
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=236.50 Aligned_cols=253 Identities=7% Similarity=-0.024 Sum_probs=202.1
Q ss_pred CCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC
Q 019326 40 AHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA 117 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 117 (343)
.-...|.+++|+ |+++|+++.|++|+ |...++ .+.+| ...|.+++|+|++ .++.+.+|+.
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh-~~~v~~V~FsPdg------------~~~~~~~~~~ 74 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCN-SKNLFHVKEFPLE------------FENKLDFELA 74 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSB-GGGTEEEEEECCC------------CCCTTTTSCC
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccc---eecCC-CccEEEEEECCCC------------CcceEEEEeC
Confidence 345789999999 99999999999999 755554 44688 9999999999975 3555555554
Q ss_pred CCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCC-----cceEEEEeCCCCEEEEE-eC
Q 019326 118 DPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGK-----EASLIKFDGSGEKFFMV-TE 191 (343)
Q Consensus 118 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~ 191 (343)
+.. .+..+ .|...|.+++|+|+|..|++++.||.|++||... .+....+.. .+.+++|+|+|++++++ .|
T Consensus 75 ~~~-~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D 150 (588)
T 2j04_A 75 QQN-GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED 150 (588)
T ss_dssp CSS-CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT
T ss_pred CCc-eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC
Confidence 332 22233 3578999999999999999999999999999544 333334222 48999999999999999 89
Q ss_pred CcEEEEEccccee-------EEEec-----CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCce---eEEecccccccE
Q 019326 192 EKVGIHQAEDAKL-------LCELD-----GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKV---AYCIEDAHSARV 256 (343)
Q Consensus 192 ~~i~~~d~~~~~~-------~~~~~-----~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~h~~~v 256 (343)
|.|++||+.++.. +..+. |...|.+++|++++ +++++.|+.|++||+..++. ..++..+|...|
T Consensus 151 GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V 229 (588)
T 2j04_A 151 GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKI 229 (588)
T ss_dssp SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCC
T ss_pred CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcE
Confidence 9999999998753 55653 56799999999877 99999999999999988773 356633788999
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEc--CCCCceeccccCCCC
Q 019326 257 KGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAG--SSTKSFKRPQIGDSA 331 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~~~~~~~~~~ 331 (343)
.+++|+ +. .||+++ |++|++||+.++... .....+...|..+++ +|++..++.+.+++.
T Consensus 230 ~svaFs--g~---------~LASa~-~~tIkLWd~~~~~~~----~~~~gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 230 TDLKIV--DY---------KVVLTC-PGYVHKIDLKNYSIS----SLKTGSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp CCEEEE--TT---------EEEEEC-SSEEEEEETTTTEEE----EEECSCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred EEEEEE--CC---------EEEEEe-CCeEEEEECCCCeEE----EEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 999999 44 899997 699999999986421 223256678999999 999999999998887
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.9e-30 Score=215.06 Aligned_cols=254 Identities=11% Similarity=0.128 Sum_probs=191.8
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceE-EEeeCCCeEEEEEcCCCeeeeEec
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAA-ASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l-~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
|++|+.+ .+++|++.+ .........+ .+..+++. ++.+ ++++.|+.|++||..+++.+..+.
T Consensus 34 la~g~~~-~~~iw~~~~------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~ 98 (355)
T 3vu4_A 34 LILSTLK-SFEIYNVHP------------VAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK 98 (355)
T ss_dssp EEEECSS-EEEEEEETT------------EEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE
T ss_pred EEEEcCC-EEEEEecCC------------cceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE
Confidence 5666655 578999876 2223322222 35555555 5555 678888999999999999999887
Q ss_pred cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc-ceeeeeeeccccEEEEEEecCCCEEEE--EeCCCeEEE
Q 019326 80 HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF-VLLTSVKVHKKGVNDLAVHHSGKLALT--VGRDDCLAM 156 (343)
Q Consensus 80 ~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~~--~~~d~~i~~ 156 (343)
. ...|.+++++++. ++++ .|+.|++||+.++ +.+..+.. +...+++++ .+++. ++.||.|++
T Consensus 99 ~--~~~v~~v~~~~~~-------~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 99 V--DAPVKDLFLSREF-------IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHI 163 (355)
T ss_dssp C--SSCEEEEEECSSE-------EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEE
T ss_pred C--CCceEEEEEcCCE-------EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEE
Confidence 4 4799999998764 3433 4789999999987 77777765 444566676 46665 588999999
Q ss_pred EEccCCc-----------------eeEEEEcCCcceEEEEeCCCCEEEEE-eCCc-EEEEEcccceeEEEec---CCcce
Q 019326 157 VNLVRGR-----------------RSFYHKIGKEASLIKFDGSGEKFFMV-TEEK-VGIHQAEDAKLLCELD---GKKRI 214 (343)
Q Consensus 157 wd~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-i~~~d~~~~~~~~~~~---~~~~i 214 (343)
||+++++ ......+...+.+++|+|++++++++ .|+. |++||+++++.+..+. |...|
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v 243 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADV 243 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCE
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcE
Confidence 9999865 23344566889999999999999999 8998 9999999999999987 88999
Q ss_pred EEeeecC-CCeEEEEeCCCcEEEEECCCCce--eEEe--------------------cccccccEEEEEEEecCCCCCCC
Q 019326 215 LCAAPGE-NGVLFTGGEDRSITAWDTNSGKV--AYCI--------------------EDAHSARVKGIVVLTKNDGGSTA 271 (343)
Q Consensus 215 ~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~--~~~~--------------------~~~h~~~v~~~~~~~~~~~~~~~ 271 (343)
.+++|++ +++|++++.|+.|++||++.+.. ...+ ...+......++|++++.
T Consensus 244 ~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~----- 318 (355)
T 3vu4_A 244 VDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS----- 318 (355)
T ss_dssp EEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE-----
T ss_pred EEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC-----
Confidence 9999995 67999999999999999976531 1111 111122335677777766
Q ss_pred CCCeEEEEEcCCCcEEEEeccCcc
Q 019326 272 ENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 272 ~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+|++++.||.+++|++..+.
T Consensus 319 ----~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 319 ----LVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp ----EEEEETTTTEEEEEEEEEET
T ss_pred ----EEEEEeCCCeEEEEEEEcCC
Confidence 99999999999999998753
No 124
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.9e-31 Score=230.04 Aligned_cols=247 Identities=14% Similarity=0.184 Sum_probs=200.3
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC----------cceeeeeeeccccEEEEEEecCCC-EE
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP----------FVLLTSVKVHKKGVNDLAVHHSGK-LA 145 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v~~i~~~~~~~-~l 145 (343)
....| ...|++++|+|++ +.+|++++.||.|++||+.+ .+.+..+.+|...|.+++|+|++. +|
T Consensus 123 ~~~~h-~~~v~~l~~~p~~----~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 197 (430)
T 2xyi_A 123 IKINH-EGEVNRARYMPQN----ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYL 197 (430)
T ss_dssp EEEEE-SSCCSEEEEETTE----EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEE
T ss_pred EEEcC-CCcEEEEEECCCC----CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeE
Confidence 34567 8999999999973 17999999999999999976 577888899999999999999988 99
Q ss_pred EEEeCCCeEEEEEccCCce--------eEEEEcCCcceEEEEeC-CCCEEEEE-eCCcEEEEEcccc---eeEEEe-cCC
Q 019326 146 LTVGRDDCLAMVNLVRGRR--------SFYHKIGKEASLIKFDG-SGEKFFMV-TEEKVGIHQAEDA---KLLCEL-DGK 211 (343)
Q Consensus 146 ~~~~~d~~i~~wd~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~i~~~d~~~~---~~~~~~-~~~ 211 (343)
++++.||.|++||+.++.. .....+...+.+++|+| ++..++++ .++.|++||+++. +....+ .|.
T Consensus 198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp EEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred EEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence 9999999999999987432 11224557799999999 67788788 8999999999987 455555 488
Q ss_pred cceEEeeecC-CC-eEEEEeCCCcEEEEECCC-CceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEE
Q 019326 212 KRILCAAPGE-NG-VLFTGGEDRSITAWDTNS-GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICV 288 (343)
Q Consensus 212 ~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~v 288 (343)
..+++++|++ +. ++++|+.||.|++||+++ ..++..+. .|...|.+++|+|++.. +|++++.||.|++
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~--------~l~s~~~d~~i~i 348 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNET--------ILASSGTDRRLHV 348 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTT--------EEEEEETTSCCEE
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCC--------EEEEEeCCCcEEE
Confidence 9999999995 33 688999999999999998 56788888 89999999999998742 7999999999999
Q ss_pred EeccCccccC---------CCccccc-ccccceeEEEcCCCCc-eeccccCCCCCCCccc
Q 019326 289 WDVRMAIKEK---------PLPLAEA-KTNSRLTCLAGSSTKS-FKRPQIGDSAPKGEEK 337 (343)
Q Consensus 289 wd~~~~~~~~---------~~~~~~~-~~~~~i~~~~~s~~~~-~~~~~~~~~~~~~~~~ 337 (343)
||+....... +..+... .+...|.+++|+|++. +++.+..++.++.++.
T Consensus 349 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 349 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp EEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred EeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 9998742211 1222222 3455799999999999 8888888886554443
No 125
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=5.1e-30 Score=227.29 Aligned_cols=295 Identities=15% Similarity=0.069 Sum_probs=232.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEc--CCCeeeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDL--STSSSLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~--~~~~~~~~ 77 (343)
.+++++.|+.|.+||..+ .+.+.++..+.. +.+++|+ +++|++++.|+.|++||+ .+++.+..
T Consensus 151 ~~vs~~~d~~V~v~D~~t------------~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~ 217 (543)
T 1nir_A 151 FSVTLRDAGQIALVDGDS------------KKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE 217 (543)
T ss_dssp EEEEEGGGTEEEEEETTT------------CCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred EEEEEcCCCeEEEEECCC------------ceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE
Confidence 367888899999999877 234455553323 8899998 899999999999999999 88998888
Q ss_pred eccCCCCCeEEEEEeC----CCCCCCCceEEEeeC-CCeEEEEECCCcceeeeeeec----------cc-cEEEEEEecC
Q 019326 78 IHHHESSSVTSLAFYT----PQNLSVPRNLFSTSA-DGFVSIFDADPFVLLTSVKVH----------KK-GVNDLAVHHS 141 (343)
Q Consensus 78 ~~~~~~~~v~~l~~~~----~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~----------~~-~v~~i~~~~~ 141 (343)
+..+ ..+..++|+| ++ +++++++. +++|.+||..+++++..+..+ .. .+..+.++|+
T Consensus 218 i~~g--~~p~~va~sp~~~~dg-----~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~ 290 (543)
T 1nir_A 218 IKIG--IEARSVESSKFKGYED-----RYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE 290 (543)
T ss_dssp EECC--SEEEEEEECCSTTCTT-----TEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS
T ss_pred EecC--CCcceEEeCCCcCCCC-----CEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC
Confidence 8754 6789999999 88 78888875 899999999999998888652 23 7899999997
Q ss_pred CC-EEEEEeCCCeEEEEEccCCceeE--EEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEec-----CC
Q 019326 142 GK-LALTVGRDDCLAMVNLVRGRRSF--YHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELD-----GK 211 (343)
Q Consensus 142 ~~-~l~~~~~d~~i~~wd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~-----~~ 211 (343)
+. ++++...++.|.+||+.+.+.+. .......+..+.|+|++++++++ .++.|.+||..+++++..+. |.
T Consensus 291 ~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~ 370 (543)
T 1nir_A 291 HPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHP 370 (543)
T ss_dssp SSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCC
T ss_pred CCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCC
Confidence 65 55667778999999998876544 44455678889999999988766 68899999999999988876 33
Q ss_pred cceEEeeecC-CCeEEEEe-CCCcEEEEECCC-------CceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc-
Q 019326 212 KRILCAAPGE-NGVLFTGG-EDRSITAWDTNS-------GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS- 281 (343)
Q Consensus 212 ~~i~~~~~~~-~~~l~~~~-~dg~i~i~d~~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~- 281 (343)
.....+...+ +.+++++. .|++|.+||+.+ ++.++++. .|...+..++++|+++ +|++++
T Consensus 371 g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~-~~g~~~~~v~~~pdg~---------~l~v~~~ 440 (543)
T 1nir_A 371 GRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ-GQGGGSLFIKTHPKSS---------HLYVDTT 440 (543)
T ss_dssp TTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE-CSCSCCCCEECCTTCC---------EEEECCT
T ss_pred CCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE-cCCCCceEEEcCCCCC---------cEEEecC
Confidence 3333443323 44566665 589999999998 88999999 8988889999999987 899887
Q ss_pred ------CCCcEEEEeccCcccc-CCCcccc----cccccceeEEEcCCCCceeccc
Q 019326 282 ------SDGVICVWDVRMAIKE-KPLPLAE----AKTNSRLTCLAGSSTKSFKRPQ 326 (343)
Q Consensus 282 ------~dg~i~vwd~~~~~~~-~~~~~~~----~~~~~~i~~~~~s~~~~~~~~~ 326 (343)
.+++|.|||+.+.+.. ..+++.. .....++..++|+++++++...
T Consensus 441 ~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s 496 (543)
T 1nir_A 441 FNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFS 496 (543)
T ss_dssp TCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEE
T ss_pred CCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEE
Confidence 2789999999988643 2222221 1235679999999999988754
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=1.4e-30 Score=223.06 Aligned_cols=225 Identities=13% Similarity=-0.014 Sum_probs=168.9
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec----------CceEEEeeCCCeEEEEEcCC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS----------GTAAASGGTDDTIHLYDLST 71 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----------~~~l~s~~~dg~i~iwd~~~ 71 (343)
.|++|+.|++|++||+.. +.......+..+.+|.+.|++++|+ +++||+|+.|++|+|||+.+
T Consensus 103 ~las~~~d~~v~lw~~~~-------~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKN-------ETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp EEEEEETTSCEEEEEEET-------TEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred EEEEEeCCCcEEEEECCC-------CccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 488999999999999987 4444455667788999999999995 57999999999999999999
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee-------------------------
Q 019326 72 SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV------------------------- 126 (343)
Q Consensus 72 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------------------------- 126 (343)
+.++..+..| ...|.+++|+|++ +.+|++|+.|++|++||+.+++.....
T Consensus 176 ~~~~~~~~~~-~~~v~~v~~~p~~----~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 250 (393)
T 4gq1_A 176 EGPILAGYPL-SSPGISVQFRPSN----PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHS 250 (393)
T ss_dssp TEEEEEEEEC-SSCEEEEEEETTE----EEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-----
T ss_pred CceeeeecCC-CCCcEEEEECCCC----CceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeec
Confidence 8888888888 7999999999987 258999999999999999876543221
Q ss_pred eeccccEEEEEEe-cCCCEEEEEeCCCeEEEEEccCCceeEEEEc-------------------CCcceEEEEeC-CCCE
Q 019326 127 KVHKKGVNDLAVH-HSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-------------------GKEASLIKFDG-SGEK 185 (343)
Q Consensus 127 ~~~~~~v~~i~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------------------~~~~~~~~~~~-~~~~ 185 (343)
.+|...+.++.|. |+++.+++++.|+++++||+..++....... ........+.| .+..
T Consensus 251 ~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (393)
T 4gq1_A 251 SGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDY 330 (393)
T ss_dssp -CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTE
T ss_pred ccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCE
Confidence 3466788889987 7899999999999999999987654332211 01111223333 3444
Q ss_pred -EEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEEC
Q 019326 186 -FFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDT 239 (343)
Q Consensus 186 -~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~ 239 (343)
++++ .|+.|++||..+++....+. |..+|.+++|+ ++++|++++.+| +.+|.+
T Consensus 331 ~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 331 FATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 4555 79999999999987766544 88899999999 567888888766 556654
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=2.2e-29 Score=216.81 Aligned_cols=285 Identities=12% Similarity=0.036 Sum_probs=216.2
Q ss_pred eEEec----cCC----eEEEEEe--ecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec----------------CceEE
Q 019326 3 LIAGS----YEK----FIWGYKL--KPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS----------------GTAAA 56 (343)
Q Consensus 3 l~~g~----~d~----~i~vw~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----------------~~~l~ 56 (343)
+++|+ .+| .|++||+ .+ ++ ......+.+|...+..+++. +..++
T Consensus 78 ~~~g~~~~~~~G~~~~~i~lwd~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~ 147 (415)
T 2hqs_A 78 VVVGQVTPNPDGSYNVAYQLVDTGGAP-------GT---VLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIA 147 (415)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECSSST-------TC---EEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEE
T ss_pred EEEEEEEECCCCeEEEEEEEEeCCCCC-------CC---EEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEE
Confidence 34665 457 8999999 66 22 12224567888888777664 55676
Q ss_pred EeeCC------CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC---eEEEEECCCcceeeeee
Q 019326 57 SGGTD------DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG---FVSIFDADPFVLLTSVK 127 (343)
Q Consensus 57 s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~ 127 (343)
.++.+ +.|++||++ +.....+..| ...+.+++|+|++ +.|++++.++ .|++||+.+++.. .+.
T Consensus 148 ~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~-~~~v~~~~~Spdg-----~~la~~s~~~~~~~i~~~d~~tg~~~-~l~ 219 (415)
T 2hqs_A 148 YVVQTNGGQFPYELRVSDYD-GYNQFVVHRS-PQPLMSPAWSPDG-----SKLAYVTFESGRSALVIQTLANGAVR-QVA 219 (415)
T ss_dssp EEEECSSSSCCEEEEEEETT-SCSCEEEEEE-SSCEEEEEECTTS-----SEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred EEEecCCCCccceEEEEcCC-CCCCEEEeCC-CCcceeeEEcCCC-----CEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence 66654 799999997 4556777778 8899999999999 7899998875 9999999988765 566
Q ss_pred eccccEEEEEEecCCCEEE-EEeCCC--eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-e-CC--cEEEEEcc
Q 019326 128 VHKKGVNDLAVHHSGKLAL-TVGRDD--CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-T-EE--KVGIHQAE 200 (343)
Q Consensus 128 ~~~~~v~~i~~~~~~~~l~-~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~--~i~~~d~~ 200 (343)
.|...+.+++|+|+|+.|+ +++.++ .|++||+.+++......+...+..++|+|+++.++.+ . ++ .|.+||+.
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 6888999999999999887 666555 4999999988875555556778899999999988887 3 34 67888988
Q ss_pred cceeEEEecCCcceEEeeecC-CCeEEEEeCC---CcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeE
Q 019326 201 DAKLLCELDGKKRILCAAPGE-NGVLFTGGED---RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYL 276 (343)
Q Consensus 201 ~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 276 (343)
+++......+...+.+++|++ +++|++++.+ ..|++||+.+++. ..+. .|. .+.+++|+|++. +
T Consensus 300 ~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~-~~~-~~~~~~~spdg~---------~ 367 (415)
T 2hqs_A 300 GGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLS-STF-LDETPSLAPNGT---------M 367 (415)
T ss_dssp SSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECC-CSS-SCEEEEECTTSS---------E
T ss_pred CCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEec-CCC-CcCCeEEcCCCC---------E
Confidence 877544334667788999984 5677777654 5899999998876 4555 454 899999999887 8
Q ss_pred EEEEcCCC---cEEEEeccCccccCCCcccccccccceeEEEcCCCCce
Q 019326 277 VASASSDG---VICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSF 322 (343)
Q Consensus 277 l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 322 (343)
|++++.|+ .|++||+...... .+ ..+.+.|.+++|+|-..+
T Consensus 368 l~~~s~~~~~~~l~~~d~~g~~~~---~l--~~~~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 368 VIYSSSQGMGSVLNLVSTDGRFKA---RL--PATDGQVKFPAWSPYLHH 411 (415)
T ss_dssp EEEEEEETTEEEEEEEETTSCCEE---EC--CCSSSEEEEEEECCCCCC
T ss_pred EEEEEcCCCccEEEEEECCCCcEE---Ee--eCCCCCCcCCcccccccc
Confidence 98888877 7999999754211 11 234467999999987544
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.3e-26 Score=188.15 Aligned_cols=283 Identities=12% Similarity=0.093 Sum_probs=189.1
Q ss_pred eeEEeEEecCCCCC----eEEEEec--C--c-eEEEeeCCCeEEEEEcCCC---eeeeEeccCCCCCeEEEEEeCCCCCC
Q 019326 31 TLTQLFSYPAHLSP----ITTVAVS--G--T-AAASGGTDDTIHLYDLSTS---SSLGAIHHHESSSVTSLAFYTPQNLS 98 (343)
Q Consensus 31 ~~~~~~~~~~h~~~----v~~l~~~--~--~-~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~l~~~~~~~~~ 98 (343)
.++.+..++...+. +.++-|- + + .++++++ ..|++|+..++ +++.++..| ..+|..+.+.|+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~-- 99 (356)
T 2w18_A 24 NLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFA-EVPVLQIVPVPDVY-- 99 (356)
T ss_dssp CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECC-SSCEEEECCCTTCC--
T ss_pred eeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEecc-CceeEEEEEcCccc--
Confidence 45556666654433 4455554 2 2 4666665 67999999998 889999999 88999999999762
Q ss_pred CCceEEEeeCCCeE-EEEEC--CCc----ceeeeeeeccccEEEEEEecCCCEEEEEe--CCCeEEEEEccC-CceeE-E
Q 019326 99 VPRNLFSTSADGFV-SIFDA--DPF----VLLTSVKVHKKGVNDLAVHHSGKLALTVG--RDDCLAMVNLVR-GRRSF-Y 167 (343)
Q Consensus 99 ~~~~l~s~~~dg~i-~iwd~--~~~----~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--~d~~i~~wd~~~-~~~~~-~ 167 (343)
+++..+-.+=.+ .++-+ ... .....-.+|...|.++ ++++.+.+++ .|+.|++|++.. ++.+. .
T Consensus 100 --~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~ 174 (356)
T 2w18_A 100 --NLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQ 174 (356)
T ss_dssp --SCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEE
T ss_pred --ceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeee
Confidence 233322222111 11111 111 1122223455455554 5666666544 599999999954 65544 3
Q ss_pred EEcCCcceEEEEeC---CCCEEEEE-eCCcEEEEEcccceeEEEec-CC---cceEEeeecC-CCeE------------E
Q 019326 168 HKIGKEASLIKFDG---SGEKFFMV-TEEKVGIHQAEDAKLLCELD-GK---KRILCAAPGE-NGVL------------F 226 (343)
Q Consensus 168 ~~~~~~~~~~~~~~---~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~---~~i~~~~~~~-~~~l------------~ 226 (343)
..+...+..++|++ ++..++++ .|++|++||+.+++.++++. |. ..+.+++|++ +.++ +
T Consensus 175 ~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~la 254 (356)
T 2w18_A 175 FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESES 254 (356)
T ss_dssp EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---------
T ss_pred ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceee
Confidence 45567888999999 78999998 89999999999999999987 32 3566667774 3443 6
Q ss_pred EEeCCCcEEEEECCCCceeEEe----cccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcc
Q 019326 227 TGGEDRSITAWDTNSGKVAYCI----EDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPL 302 (343)
Q Consensus 227 ~~~~dg~i~i~d~~~~~~~~~~----~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 302 (343)
+|+.|++|++||..+++.+..+ +.+|...+.+..++ +. ++++++.|++|+|||+.+++.....
T Consensus 255 SGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~---------~lASgS~DgTIkIWDl~tGk~l~tL-- 321 (356)
T 2w18_A 255 LRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DH---------CAAAILTSGTIAIWDLLLGQCTALL-- 321 (356)
T ss_dssp ---CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TT---------EEEEEETTSCEEEEETTTCSEEEEE--
T ss_pred ccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CC---------EEEEEcCCCcEEEEECCCCcEEEEe--
Confidence 7889999999999999887665 23676665444333 44 8999999999999999987533211
Q ss_pred cccccccceeEEEcCCCCceeccccCCCCCCCcc
Q 019326 303 AEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEE 336 (343)
Q Consensus 303 ~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~ 336 (343)
..+....+.+++|+||+++++++..|+.++.++
T Consensus 322 -~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 322 -PPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp -CCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred -cCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 122333455799999999999999999888664
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=7.5e-26 Score=194.82 Aligned_cols=240 Identities=11% Similarity=0.049 Sum_probs=189.9
Q ss_pred eeEEeccC------CeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCC---eEEEEEcC
Q 019326 2 SLIAGSYE------KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDD---TIHLYDLS 70 (343)
Q Consensus 2 ~l~~g~~d------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg---~i~iwd~~ 70 (343)
+|+.++.+ +.|++||+.. .....+.+|...|.+++|+ ++.|++++.++ .|++||+.
T Consensus 145 ~l~~~s~~~~~~~~~~i~i~d~~g-------------~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~ 211 (415)
T 2hqs_A 145 RIAYVVQTNGGQFPYELRVSDYDG-------------YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA 211 (415)
T ss_dssp EEEEEEECSSSSCCEEEEEEETTS-------------CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred EEEEEEecCCCCccceEEEEcCCC-------------CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECC
Confidence 35555554 7999999864 1234455788999999999 88999999875 99999999
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEE-EeeCCCe--EEEEECCCcceeeeeeeccccEEEEEEecCCCEEEE
Q 019326 71 TSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLF-STSADGF--VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALT 147 (343)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~-s~~~dg~--i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 147 (343)
+++.. .+..+ ...+.+++|+|++ +.|+ +++.++. |++||+.+++. ..+..|...+.+++|+|+++.|++
T Consensus 212 tg~~~-~l~~~-~~~~~~~~~spdg-----~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~ 283 (415)
T 2hqs_A 212 NGAVR-QVASF-PRHNGAPAFSPDG-----SKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAF 283 (415)
T ss_dssp TCCEE-EEECC-SSCEEEEEECTTS-----SEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEE
T ss_pred CCcEE-EeecC-CCcccCEEEcCCC-----CEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEE
Confidence 98775 45566 6889999999999 6666 6666654 99999988765 566678889999999999999988
Q ss_pred EeCC-C--eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eC---CcEEEEEcccceeEEEecCCcceEEeeec
Q 019326 148 VGRD-D--CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TE---EKVGIHQAEDAKLLCELDGKKRILCAAPG 220 (343)
Q Consensus 148 ~~~d-~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~i~~~d~~~~~~~~~~~~~~~i~~~~~~ 220 (343)
++.+ + .|.+||+.+++..........+..++|+|++++++.+ .+ ..|.+||+.+++... +.....+.+++|+
T Consensus 284 ~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~~~~~~~~~s 362 (415)
T 2hqs_A 284 TSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSSTFLDETPSLA 362 (415)
T ss_dssp EECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCSSSCEEEEEC
T ss_pred EECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCCCCcCCeEEc
Confidence 8864 4 6888899887754433445678889999999999888 43 589999999887743 4433488999998
Q ss_pred C-CCeEEEEeCCC---cEEEEECCCCceeEEecccccccEEEEEEEecC
Q 019326 221 E-NGVLFTGGEDR---SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKN 265 (343)
Q Consensus 221 ~-~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~ 265 (343)
+ +++|++++.++ .|++||+. +.....+. .|...|.+++|+|..
T Consensus 363 pdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~-~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 363 PNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLP-ATDGQVKFPAWSPYL 409 (415)
T ss_dssp TTSSEEEEEEEETTEEEEEEEETT-SCCEEECC-CSSSEEEEEEECCCC
T ss_pred CCCCEEEEEEcCCCccEEEEEECC-CCcEEEee-CCCCCCcCCcccccc
Confidence 4 56787777766 79999987 55677888 899999999999875
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=1.5e-25 Score=188.25 Aligned_cols=285 Identities=13% Similarity=0.113 Sum_probs=198.0
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCC-CeEEEEEcC--CCe--ee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTD-DTIHLYDLS--TSS--SL 75 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~d-g~i~iwd~~--~~~--~~ 75 (343)
+++++.++.|++|++... + .......+ .|...+.+++|+ +++|++++.+ +.|++|+++ +++ .+
T Consensus 8 ~~~~~~~~~v~~~~~~~~------~---~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHE------G---ALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA 77 (343)
T ss_dssp EEEEGGGTEEEEEEECTT------S---CEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred EEeCCCCCeEEEEEECCC------C---cEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeec
Confidence 344478999999999631 1 12233333 467789999998 7888888876 999999998 554 34
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEee-CCCeEEEEEC---CCcceeeeeeeccccEEEEEEecCCCEEEEEe-C
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS-ADGFVSIFDA---DPFVLLTSVKVHKKGVNDLAVHHSGKLALTVG-R 150 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~-~dg~i~iwd~---~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-~ 150 (343)
..+..+ ..+..++|+|++ ++|++++ .++.|.+||+ ...+.+..+.. ...+.+++|+|+++++++++ .
T Consensus 78 ~~~~~~--~~~~~~~~s~dg-----~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~ 149 (343)
T 1ri6_A 78 AESALP--GSLTHISTDHQG-----QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALK 149 (343)
T ss_dssp EEEECS--SCCSEEEECTTS-----SEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGG
T ss_pred cccccC--CCCcEEEEcCCC-----CEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCC
Confidence 455555 478999999999 6666555 4889999999 44444555543 34588899999999888877 8
Q ss_pred CCeEEEEEccC-CceeEE----EE--cCCcceEEEEeCCCCEEEEE--eCCcEEEEEccc--cee--EEEec---C----
Q 019326 151 DDCLAMVNLVR-GRRSFY----HK--IGKEASLIKFDGSGEKFFMV--TEEKVGIHQAED--AKL--LCELD---G---- 210 (343)
Q Consensus 151 d~~i~~wd~~~-~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~--~~~--~~~~~---~---- 210 (343)
++.|.+||+.+ ++.... .. ....+..++|+|++++++++ .++.+.+|++.. ++. ...+. .
T Consensus 150 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (343)
T 1ri6_A 150 QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSD 229 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCS
T ss_pred CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccc
Confidence 99999999987 554321 12 23467789999999977655 688999999953 332 22222 1
Q ss_pred CcceEEeeecC-CCeEE-EEeCCCcEEEEECC--C--CceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc-CC
Q 019326 211 KKRILCAAPGE-NGVLF-TGGEDRSITAWDTN--S--GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS-SD 283 (343)
Q Consensus 211 ~~~i~~~~~~~-~~~l~-~~~~dg~i~i~d~~--~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~-~d 283 (343)
...+..++|++ +++++ ++..++.|.+||+. + .+.+..+. .+.. +.+++|+|++. +|++++ .|
T Consensus 230 ~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~-~~~~-~~~~~~s~dg~---------~l~~~~~~~ 298 (343)
T 1ri6_A 230 TRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP-TETQ-PRGFNVDHSGK---------YLIAAGQKS 298 (343)
T ss_dssp CCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE-CSSS-CCCEEECTTSS---------EEEEECTTT
T ss_pred cCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec-CCCc-cceEEECCCCC---------EEEEecCCC
Confidence 23566788985 45665 55579999999998 2 34455555 3433 88999999887 777777 68
Q ss_pred CcEEEEecc--CccccCCCcccccccccceeEEEcCCC
Q 019326 284 GVICVWDVR--MAIKEKPLPLAEAKTNSRLTCLAGSST 319 (343)
Q Consensus 284 g~i~vwd~~--~~~~~~~~~~~~~~~~~~i~~~~~s~~ 319 (343)
+.|.+|+++ ++.. ..+.....+....++++.++
T Consensus 299 ~~v~v~~~d~~~g~~---~~~~~~~~g~~p~~i~~~~~ 333 (343)
T 1ri6_A 299 HHISVYEIVGEQGLL---HEKGRYAVGQGPMWVVVNAH 333 (343)
T ss_dssp CEEEEEEEETTTTEE---EEEEEEECSSSCCEEEEEEE
T ss_pred CeEEEEEEcCCCcee---eEccccccCCCCeeEEEEcc
Confidence 999999665 3321 12333444455667777654
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=3.7e-25 Score=185.09 Aligned_cols=263 Identities=9% Similarity=0.080 Sum_probs=194.2
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeC-CCeEEEEEcCCCee-eeEe
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGT-DDTIHLYDLSTSSS-LGAI 78 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~-dg~i~iwd~~~~~~-~~~~ 78 (343)
+++.+.++.|++||..+ + +....+..+...+ +++|+ ++++++++. ++.|.+||..+++. ...+
T Consensus 13 ~v~~~~~~~v~~~d~~~-------~-----~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 79 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDT-------L-----EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI 79 (331)
T ss_dssp EEEEGGGTEEEEEETTT-------C-----CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred EEEecCCCeEEEEeCcc-------c-----ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence 67888899999999876 2 2222333445556 99998 666666555 89999999999987 6677
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC---eEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEE-eCCCe-
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSADG---FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTV-GRDDC- 153 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~~d~~- 153 (343)
..+ ..+..+++|+|++ ++++++..++ .|.+||+.+++.+..+.. .....+++|+|++++++++ ..++.
T Consensus 80 ~~~-~~~~~~~~~s~dg-----~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~ 152 (331)
T 3u4y_A 80 QEG-QSSMADVDITPDD-----QFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANT 152 (331)
T ss_dssp EEC-SSCCCCEEECTTS-----SEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTE
T ss_pred ccC-CCCccceEECCCC-----CEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCce
Confidence 666 5555559999999 7788555553 899999999888887764 4456899999999855554 55577
Q ss_pred EEEEEccCCcee-----EEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEccccee---EEEecCCcceEEeeecC-C
Q 019326 154 LAMVNLVRGRRS-----FYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKL---LCELDGKKRILCAAPGE-N 222 (343)
Q Consensus 154 i~~wd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~---~~~~~~~~~i~~~~~~~-~ 222 (343)
|.+|++.....+ ........+..++|+|++++++++ .++.+.+||+.+++. +..+.....+..+++++ +
T Consensus 153 i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 232 (331)
T 3u4y_A 153 VRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDG 232 (331)
T ss_dssp EEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTS
T ss_pred EEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCC
Confidence 999998764432 122334567889999999976666 688999999999888 77787777788899984 5
Q ss_pred CeEEEE-eCCCcEEEEECCCCce--eEEecccc----cc---cEEEEEEEecCCCCCCCCCCeEEE-EEcCCCcEEEEec
Q 019326 223 GVLFTG-GEDRSITAWDTNSGKV--AYCIEDAH----SA---RVKGIVVLTKNDGGSTAENPYLVA-SASSDGVICVWDV 291 (343)
Q Consensus 223 ~~l~~~-~~dg~i~i~d~~~~~~--~~~~~~~h----~~---~v~~~~~~~~~~~~~~~~~~~~l~-s~~~dg~i~vwd~ 291 (343)
++++++ ..++.|.+||..+++. +..+. .+ .. ....++|+|++. +|+ ++..++.|.+||+
T Consensus 233 ~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~spdg~---------~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 233 STVYVLTESTVDVFNFNQLSGTLSFVKSFG-HGLLIDPRPLFGANQMALNKTET---------KLFISANISRELKVFTI 302 (331)
T ss_dssp SEEEEECSSEEEEEEEETTTTEEEEEEEEE-CCCCCCCGGGTTCCCEEECTTSS---------EEEEEETTTTEEEEEET
T ss_pred CEEEEEEcCCCEEEEEECCCCceeeecccc-cccccCCCCcccccceEECCCCC---------EEEEecCCCCcEEEEEe
Confidence 655544 4578899999998876 44433 11 22 225588988876 665 4555679999999
Q ss_pred cCcc
Q 019326 292 RMAI 295 (343)
Q Consensus 292 ~~~~ 295 (343)
....
T Consensus 303 ~~~~ 306 (331)
T 3u4y_A 303 SGKV 306 (331)
T ss_dssp TSCE
T ss_pred cCCc
Confidence 8753
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=2e-24 Score=182.16 Aligned_cols=267 Identities=13% Similarity=0.108 Sum_probs=208.5
Q ss_pred CCCeEEEEec--CceEEEeeC-------CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCc-eEEEeeCCCe
Q 019326 42 LSPITTVAVS--GTAAASGGT-------DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPR-NLFSTSADGF 111 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~l~s~~~dg~ 111 (343)
...+..++|+ ++.+++++. ++.|.+||..+++.+..+... ..+..++|+|++ + .+++...++.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg-----~~l~v~~~~~~~ 112 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND--LKPFGATINNTT-----QTLWFGNTVNSA 112 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES--SCCCSEEEETTT-----TEEEEEETTTTE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC--CCcceEEECCCC-----CEEEEEecCCCE
Confidence 4567889998 677777764 568999999999988888755 457889999998 5 4555666899
Q ss_pred EEEEECCCcceeeeeeecccc---------EEEEEEecCCCEEEEEe--CCCeEEEEEccCCceeEEEE-cCCcceEEEE
Q 019326 112 VSIFDADPFVLLTSVKVHKKG---------VNDLAVHHSGKLALTVG--RDDCLAMVNLVRGRRSFYHK-IGKEASLIKF 179 (343)
Q Consensus 112 i~iwd~~~~~~~~~~~~~~~~---------v~~i~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~ 179 (343)
|.+||..+++.+..+..+... +.+++|+|+++++++++ .++.|.+||+.+++...... ....+..++|
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLAL 192 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEE
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEE
Confidence 999999999988888765432 78899999999877776 47899999999998877776 4556889999
Q ss_pred eCCCCEEEEE-eCCcEEEEEcccceeEEEecC-----CcceEEeeecC-CCeEEEEe-CCCcEEEEECCCCceeEEeccc
Q 019326 180 DGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG-----KKRILCAAPGE-NGVLFTGG-EDRSITAWDTNSGKVAYCIEDA 251 (343)
Q Consensus 180 ~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~-----~~~i~~~~~~~-~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~ 251 (343)
+|+++.++++ .++.+.+||..+++....+.. ...+..+++++ ++++++++ .++.|.+||..+++.+..+. .
T Consensus 193 s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~ 271 (353)
T 3vgz_A 193 DSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA-A 271 (353)
T ss_dssp ETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE-C
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE-c
Confidence 9999999988 889999999999998877763 34577788884 56555554 45999999999999888887 3
Q ss_pred ccccEEEEEEEecCCCCCCCCCCeEEE-EEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 252 HSARVKGIVVLTKNDGGSTAENPYLVA-SASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 252 h~~~v~~~~~~~~~~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
.. + ..++|++++. +++ +...++.|.+||+.+++.. ........+.+++++++++++......+
T Consensus 272 ~~-~-~~~~~s~dg~---------~l~v~~~~~~~v~~~d~~~~~~~-----~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 272 PE-S-LAVLFNPARN---------EAYVTHRQAGKVSVIDAKSYKVV-----KTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp SS-C-CCEEEETTTT---------EEEEEETTTTEEEEEETTTTEEE-----EEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred CC-C-ceEEECCCCC---------EEEEEECCCCeEEEEECCCCeEE-----EEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 22 2 5688998876 554 5557999999999887532 2334445689999999999776666554
Q ss_pred CC
Q 019326 331 AP 332 (343)
Q Consensus 331 ~~ 332 (343)
..
T Consensus 336 ~~ 337 (353)
T 3vgz_A 336 ST 337 (353)
T ss_dssp CB
T ss_pred cc
Confidence 33
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=2.8e-24 Score=179.68 Aligned_cols=267 Identities=12% Similarity=0.038 Sum_probs=196.8
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-CCeEEEEECCCcce-eeeeeec
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-DGFVSIFDADPFVL-LTSVKVH 129 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~-~~~~~~~ 129 (343)
+..+++.+.++.|++||..+++.+..+..+ ...+ .++|+|++ +++++++. ++.|.+||+.+++. ...+..+
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~-~~~~s~dg-----~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLG-YDFV-DTAITSDC-----SNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECC-CCEE-EEEECSSS-----CEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEcc-CCcc-eEEEcCCC-----CEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 445778888999999999999998888766 5666 99999999 65655555 89999999999887 7777766
Q ss_pred cccEEEEEEecCCCEEEEEeCCC---eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eCCc-EEEEEcccce
Q 019326 130 KKGVNDLAVHHSGKLALTVGRDD---CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEK-VGIHQAEDAK 203 (343)
Q Consensus 130 ~~~v~~i~~~~~~~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-i~~~d~~~~~ 203 (343)
..+..+++|+|++++++++..++ .|.+||+.+++..........+..++|+|++++++++ .++. +.+|++....
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g 162 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG 162 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCC
Confidence 66665599999999999555553 8999999999988888777888999999999876666 4577 9999987533
Q ss_pred eE-----EEecCCcceEEeeecC-CCeE-EEEeCCCcEEEEECCCCce---eEEecccccccEEEEEEEecCCCCCCCCC
Q 019326 204 LL-----CELDGKKRILCAAPGE-NGVL-FTGGEDRSITAWDTNSGKV---AYCIEDAHSARVKGIVVLTKNDGGSTAEN 273 (343)
Q Consensus 204 ~~-----~~~~~~~~i~~~~~~~-~~~l-~~~~~dg~i~i~d~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 273 (343)
.+ ..+........+++++ ++++ +++..++.|++||+.+++. +..+. +...+..++|+|++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~------- 233 (331)
T 3u4y_A 163 VLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGS------- 233 (331)
T ss_dssp CEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSS-------
T ss_pred cEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCC-------
Confidence 22 3334456678899985 4544 4555789999999999988 77776 446778999999887
Q ss_pred CeEEEEEc-CCCcEEEEeccCccccCCCcccc-----cccccceeEEEcCCCCceeccccC-CCCCCCcc
Q 019326 274 PYLVASAS-SDGVICVWDVRMAIKEKPLPLAE-----AKTNSRLTCLAGSSTKSFKRPQIG-DSAPKGEE 336 (343)
Q Consensus 274 ~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~-----~~~~~~i~~~~~s~~~~~~~~~~~-~~~~~~~~ 336 (343)
+++.++ .++.|.+||+.+++......+.. .........++++|++++++.... ++.+..++
T Consensus 234 --~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 234 --TVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFT 301 (331)
T ss_dssp --EEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred --EEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEE
Confidence 666554 57899999999875411100000 011112356899999997755444 33444333
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=6.8e-25 Score=194.50 Aligned_cols=259 Identities=11% Similarity=0.069 Sum_probs=199.5
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC--CCcceeeeeeec
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA--DPFVLLTSVKVH 129 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~~ 129 (343)
+..+++++.|++|.+||..+++.+..+..+ .. +..++|+|++ ++|++++.|++|++||+ .+++.+.++. +
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g-~~-~~~v~~spdg-----~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~ 220 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YA-VHISRMSASG-----RYLLVIGRDARIDMIDLWAKEPTKVAEIK-I 220 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEECS-TT-EEEEEECTTS-----CEEEEEETTSEEEEEETTSSSCEEEEEEE-C
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEecC-cc-cceEEECCCC-----CEEEEECCCCeEEEEECcCCCCcEEEEEe-c
Confidence 778888999999999999999999999855 23 8999999999 89999999999999999 8888888887 4
Q ss_pred cccEEEEEEec----CCCEEEEEeC-CCeEEEEEccCCceeEEEEcC------------CcceEEEEeCCCCEEEEE--e
Q 019326 130 KKGVNDLAVHH----SGKLALTVGR-DDCLAMVNLVRGRRSFYHKIG------------KEASLIKFDGSGEKFFMV--T 190 (343)
Q Consensus 130 ~~~v~~i~~~~----~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~--~ 190 (343)
...+..++|+| +++++++++. +++|.+||..+++.+...... ..+..+.++|++..+++. .
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 55679999999 9999998885 899999999999887766542 257789999988877666 7
Q ss_pred CCcEEEEEcccceeEE--EecCCcceEEeeecC-CCeEEE-EeCCCcEEEEECCCCceeEEeccc---ccccEEEEEEEe
Q 019326 191 EEKVGIHQAEDAKLLC--ELDGKKRILCAAPGE-NGVLFT-GGEDRSITAWDTNSGKVAYCIEDA---HSARVKGIVVLT 263 (343)
Q Consensus 191 ~~~i~~~d~~~~~~~~--~~~~~~~i~~~~~~~-~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~---h~~~v~~~~~~~ 263 (343)
++.|.+||..+.+.+. .+.+...+..+.|++ ++++++ +..+++|.+||..+++.+..+..+ |......+ ++|
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p 379 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHP 379 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EET
T ss_pred CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCC
Confidence 8999999998866544 555666677888984 565554 556899999999999988887722 54433333 345
Q ss_pred cCCCCCCCCCCeEEEEEc-CCCcEEEEeccCcccc-C-CCccccccc-ccceeEEEcCCCCceecccc
Q 019326 264 KNDGGSTAENPYLVASAS-SDGVICVWDVRMAIKE-K-PLPLAEAKT-NSRLTCLAGSSTKSFKRPQI 327 (343)
Q Consensus 264 ~~~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~-~-~~~~~~~~~-~~~i~~~~~s~~~~~~~~~~ 327 (343)
++. .+++++. .|++|.+||+.+.... . ...+..... ...+..++++|+++++....
T Consensus 380 ~~g--------~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 380 KYG--------PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp TTE--------EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred CCc--------cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 422 2677775 6899999999873110 0 112222222 24578899999999988876
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=3.1e-25 Score=185.75 Aligned_cols=261 Identities=13% Similarity=0.067 Sum_probs=198.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEec-CCCC-CeEEEEec--CceE-EEeeCCCeEEEEEcCCCeeee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYP-AHLS-PITTVAVS--GTAA-ASGGTDDTIHLYDLSTSSSLG 76 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~-~h~~-~v~~l~~~--~~~l-~s~~~dg~i~iwd~~~~~~~~ 76 (343)
.|++++.++.|++||..+ .+....+. ++.. .+.+++|+ ++.+ +++..++.|.+||+.+++.+.
T Consensus 3 ~~v~~~~~~~v~~~d~~~------------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 70 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEK------------MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLG 70 (337)
T ss_dssp EEEEEETTTEEEEEETTT------------TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEcCCCCeEEEEECCC------------CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEe
Confidence 378889999999999876 22233333 2222 47888998 5554 566668999999999998887
Q ss_pred EeccCC----CCCeEEEEEeCCCCCCCCceEEEee------------CCCeEEEEECCCcceeeeeeeccccEEEEEEec
Q 019326 77 AIHHHE----SSSVTSLAFYTPQNLSVPRNLFSTS------------ADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH 140 (343)
Q Consensus 77 ~~~~~~----~~~v~~l~~~~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~ 140 (343)
.+.... ...+..++|+|++ ++++++. .++.|.+||+.+++.+..+.. ...+.+++|+|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~s~dg-----~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~ 144 (337)
T 1pby_B 71 RIDLSTPEERVKSLFGAALSPDG-----KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWAR 144 (337)
T ss_dssp EEECCBTTEEEECTTCEEECTTS-----SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECT
T ss_pred eEEcCCcccccccccceEECCCC-----CEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECC
Confidence 776431 1267789999998 6788775 579999999999888777764 45678899999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eCC-----------------------cEE
Q 019326 141 SGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEE-----------------------KVG 195 (343)
Q Consensus 141 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------------------~i~ 195 (343)
++++++++ ++.|.+||+.+++.............+.|+|++..++.. .++ .+.
T Consensus 145 dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 222 (337)
T 1pby_B 145 DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLL 222 (337)
T ss_dssp TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEE
T ss_pred CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceE
Confidence 99988887 688999999998877665554422334788988876555 222 468
Q ss_pred EEEcccceeEEEec---CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCC
Q 019326 196 IHQAEDAKLLCELD---GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTA 271 (343)
Q Consensus 196 ~~d~~~~~~~~~~~---~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 271 (343)
+||+.+++.. .+. +...+.++++++ +++++++ ++.|.+||+.+++.+..+. ....+.+++|+|++.
T Consensus 223 ~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~----- 292 (337)
T 1pby_B 223 TMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP--LPHSYYSVNVSTDGS----- 292 (337)
T ss_dssp EEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSC-----
T ss_pred EEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec--CCCceeeEEECCCCC-----
Confidence 9999988765 322 556678899985 5677777 7999999999998888877 345678999999887
Q ss_pred CCCeEEEEEcCCCcEEEEeccCccc
Q 019326 272 ENPYLVASASSDGVICVWDVRMAIK 296 (343)
Q Consensus 272 ~~~~~l~s~~~dg~i~vwd~~~~~~ 296 (343)
+|++++.|+.|++||+.+++.
T Consensus 293 ----~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 293 ----TVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp ----EEEEESBSSEEEEEETTTCCE
T ss_pred ----EEEEEcCCCcEEEEECcCCcE
Confidence 888889999999999998753
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=5.3e-25 Score=203.68 Aligned_cols=292 Identities=10% Similarity=0.031 Sum_probs=210.9
Q ss_pred eeEEecc-CC-----eEEEEEeecCCCCCCCCcceeeEEeEEecCCC----------------------CCeEEEEec--
Q 019326 2 SLIAGSY-EK-----FIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL----------------------SPITTVAVS-- 51 (343)
Q Consensus 2 ~l~~g~~-d~-----~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~----------------------~~v~~l~~~-- 51 (343)
.|++++. |+ .|++||+.+ ++ ...+.....+. ..|.+++|+
T Consensus 50 ~la~~~~~d~~~~~~~i~~~d~~~-------g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpD 119 (741)
T 2ecf_A 50 RVTFLRGKDSDRNQLDLWSYDIGS-------GQ---TRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPD 119 (741)
T ss_dssp EEEEEECCSSCTTEEEEEEEETTT-------CC---EEEEECGGGTC--------------------CCEESCCCEECTT
T ss_pred EEEEEeccCCCCcccEEEEEECCC-------Cc---eeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCC
Confidence 4677777 87 899999876 21 12222222222 347889998
Q ss_pred CceEEEeeCCCeEEEEEcCCCe--eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeec
Q 019326 52 GTAAASGGTDDTIHLYDLSTSS--SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVH 129 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 129 (343)
|++|++++. +.|++||+.++. ....+..+ ...+..++|+|++ ++|+.++ ++.|++||+.+++.......+
T Consensus 120 g~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~-~~~~~~~~~SPDG-----~~la~~~-~~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 120 AQRLLFPLG-GELYLYDLKQEGKAAVRQLTHG-EGFATDAKLSPKG-----GFVSFIR-GRNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp SSEEEEEET-TEEEEEESSSCSTTSCCBCCCS-SSCEEEEEECTTS-----SEEEEEE-TTEEEEEETTTTEEEECCCCC
T ss_pred CCEEEEEeC-CcEEEEECCCCCcceEEEcccC-CcccccccCCCCC-----CEEEEEe-CCcEEEEecCCCCEEEeccCC
Confidence 888888886 999999999873 44556666 7889999999999 7888877 469999999987766554433
Q ss_pred ccc----------------EEEEEEecCCCEEEEEeCCC---------------------------------eEEEEEcc
Q 019326 130 KKG----------------VNDLAVHHSGKLALTVGRDD---------------------------------CLAMVNLV 160 (343)
Q Consensus 130 ~~~----------------v~~i~~~~~~~~l~~~~~d~---------------------------------~i~~wd~~ 160 (343)
... +.+++|+|||++|++++.|+ .|.+||+.
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 332 47799999999999988765 88999998
Q ss_pred C-CceeEEE---EcCCcceEEEEeCCCCEEEEE-e-----CCcEEEEEcccceeEEEecCCc-----ceEEeeec-CCCe
Q 019326 161 R-GRRSFYH---KIGKEASLIKFDGSGEKFFMV-T-----EEKVGIHQAEDAKLLCELDGKK-----RILCAAPG-ENGV 224 (343)
Q Consensus 161 ~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~-----~~~i~~~d~~~~~~~~~~~~~~-----~i~~~~~~-~~~~ 224 (343)
+ ++..... .....+..++| |+++.+++. . +..|.+||+.+++....+.... .+..+.|+ ++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~ 350 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSI 350 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCE
T ss_pred CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeE
Confidence 8 7754433 13356788999 999999877 3 4579999999988776665222 34578888 4568
Q ss_pred EEEEeCCCcEEEEECC-CCceeEEecccccccEEEE-EEEecCCCCCCCCCCeEEE-EEcCCC--cEEEEeccCccccCC
Q 019326 225 LFTGGEDRSITAWDTN-SGKVAYCIEDAHSARVKGI-VVLTKNDGGSTAENPYLVA-SASSDG--VICVWDVRMAIKEKP 299 (343)
Q Consensus 225 l~~~~~dg~i~i~d~~-~~~~~~~~~~~h~~~v~~~-~~~~~~~~~~~~~~~~~l~-s~~~dg--~i~vwd~~~~~~~~~ 299 (343)
+++++.+|.++||.+. ++. ...+. .|...+..+ .|++++. .|+ +++.|+ .++||++..... ..
T Consensus 351 ~~~~~~~g~~~l~~~~~~~~-~~~l~-~~~~~v~~~~~~s~dg~---------~l~~~~~~~~~~~~~l~~~~~~g~-~~ 418 (741)
T 2ecf_A 351 LWSSERTGFQHLYRIDSKGK-AAALT-HGNWSVDELLAVDEKAG---------LAYFRAGIESARESQIYAVPLQGG-QP 418 (741)
T ss_dssp EEEECTTSSCEEEEECSSSC-EEESC-CSSSCEEEEEEEETTTT---------EEEEEECSSCTTCBEEEEEETTCC-CC
T ss_pred EEEecCCCccEEEEEcCCCC-eeeee-ecceEEEeEeEEeCCCC---------EEEEEEeCCCCceEEEEEEEcCCC-Ce
Confidence 8888899988888765 345 67777 777888887 5999886 564 555565 899999875211 11
Q ss_pred CcccccccccceeEEEcCCCCceecccc
Q 019326 300 LPLAEAKTNSRLTCLAGSSTKSFKRPQI 327 (343)
Q Consensus 300 ~~~~~~~~~~~i~~~~~s~~~~~~~~~~ 327 (343)
..+ .....+..++||||+++++...
T Consensus 419 ~~l---~~~~~~~~~~~spdg~~l~~~~ 443 (741)
T 2ecf_A 419 QRL---SKAPGMHSASFARNASVYVDSW 443 (741)
T ss_dssp EEC---CCSCSEEEEEECTTSSEEEEEE
T ss_pred eec---ccCCCceEEEECCCCCEEEEEe
Confidence 122 2244578999999998776543
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=5.8e-25 Score=180.51 Aligned_cols=252 Identities=11% Similarity=0.005 Sum_probs=189.2
Q ss_pred EeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC-cceeeeeeecc-ccEE
Q 019326 57 SGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP-FVLLTSVKVHK-KGVN 134 (343)
Q Consensus 57 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~-~~v~ 134 (343)
.++.|+.|++||+.+++... +..| ...|.+++|+|++ ++|++++ ++.|++||+.+ ++.......+. ..+.
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~~-~~~v~~~~~spdg-----~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQT-PELFEAPNWSPDG-----KYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEEE-SSCCEEEEECTTS-----SEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred CCCcceeEEEEeCCCCceee-eccC-CcceEeeEECCCC-----CEEEEEc-CCeEEEEeCCCCCCceEecccccccccc
Confidence 35678999999999887664 4456 7899999999999 7888876 78999999998 87776666553 6788
Q ss_pred EEEEecCCCEEEEEeC--CCeEEEE--EccCCceeEEEEcCCcceEEEEeCCCCEEE-EE-eCCcEEEEEcc--cceeEE
Q 019326 135 DLAVHHSGKLALTVGR--DDCLAMV--NLVRGRRSFYHKIGKEASLIKFDGSGEKFF-MV-TEEKVGIHQAE--DAKLLC 206 (343)
Q Consensus 135 ~i~~~~~~~~l~~~~~--d~~i~~w--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~i~~~d~~--~~~~~~ 206 (343)
+++|+|++++|++++. ++...+| ++.+++ .........+..++|+|+++.++ ++ .++.+.+|++. +++...
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 9999999999999983 3445555 544444 33344445588899999999887 44 78888888864 444444
Q ss_pred EecCCcceEEeeecC-CCeEEEEe-CCCcEEEEECC-CCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC
Q 019326 207 ELDGKKRILCAAPGE-NGVLFTGG-EDRSITAWDTN-SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD 283 (343)
Q Consensus 207 ~~~~~~~i~~~~~~~-~~~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d 283 (343)
...+...+.++.|++ +++++.++ .++.+++|++. .+..+..+. .|...+..++|+|++. +|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~---------~l~~~~~~ 237 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT-DSAYGDWFPHPSPSGD---------KVVFVSYD 237 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC-CCSEEEEEEEECTTSS---------EEEEEEEE
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe-cCCcccCCeEECCCCC---------EEEEEEcC
Confidence 444777899999985 55566554 58999999886 556667777 7888999999999887 88888766
Q ss_pred -----------CcEEEEeccCccccCCCccccc-ccccceeEEEcCCCCceeccccCCC
Q 019326 284 -----------GVICVWDVRMAIKEKPLPLAEA-KTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 284 -----------g~i~vwd~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
+.|.+||+.++.. ..+... .+...+.+++|+|++++++....+.
T Consensus 238 ~~~~~~~~~~~~~l~~~d~~~~~~---~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 238 ADVFDHPRDLDVRVQLMDMDGGNV---ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTCCSCCSSEEEEEEEEETTSCSC---EEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCCcccccCceEEEEEecCCCCc---eeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999987632 122222 3345789999999999888776665
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=1.1e-24 Score=182.47 Aligned_cols=262 Identities=10% Similarity=0.016 Sum_probs=196.9
Q ss_pred ceEEEeeCCCeEEEEEcCCCeeeeEeccCCCC-CeEEEEEeCCCCCCCCceE-EEeeCCCeEEEEECCCcceeeeeeec-
Q 019326 53 TAAASGGTDDTIHLYDLSTSSSLGAIHHHESS-SVTSLAFYTPQNLSVPRNL-FSTSADGFVSIFDADPFVLLTSVKVH- 129 (343)
Q Consensus 53 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~l~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~- 129 (343)
++|++++.++.|++||+.+++.+..+...... .+..++|+|++ +.+ +++..++.|.+||+.+++.+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg-----~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGG-----RIAYATVNKSESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTS-----SEEEEEETTTTEEEEEETTTCCEEEEEECCB
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCC-----CEEEEEeCCCCeEEEEECCCCCeEeeEEcCC
Confidence 57899999999999999999988888654112 58899999998 554 56667899999999998887776632
Q ss_pred ----cccEEEEEEecCCCEEEEEe------------CCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCc
Q 019326 130 ----KKGVNDLAVHHSGKLALTVG------------RDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEK 193 (343)
Q Consensus 130 ----~~~v~~i~~~~~~~~l~~~~------------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (343)
...+..++|+|++++++++. .++.|.+||+.+++..........+..++|+|++++++++ ++.
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~ 155 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRD 155 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSS
T ss_pred cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCe
Confidence 22567899999999988886 5799999999998887777777778889999999988887 789
Q ss_pred EEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEe-CCC-----------------------cEEEEECCCCcee-EE
Q 019326 194 VGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGG-EDR-----------------------SITAWDTNSGKVA-YC 247 (343)
Q Consensus 194 i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~-~dg-----------------------~i~i~d~~~~~~~-~~ 247 (343)
+.+||+.+++....+........+.++ ++..++..+ .++ .|.+||+.+++.. ..
T Consensus 156 i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 235 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE 235 (337)
T ss_dssp EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEee
Confidence 999999999988777632211122444 233333332 222 4789999998865 22
Q ss_pred ecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceecccc
Q 019326 248 IEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQI 327 (343)
Q Consensus 248 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~ 327 (343)
+. .+...+.+++|+|++. +++++ ++.|.+||+.+++.. ........+.++++++++++++.+.
T Consensus 236 ~~-~~~~~~~~~~~s~dg~---------~l~~~--~~~v~~~d~~~~~~~-----~~~~~~~~~~~~~~s~dg~~l~~~~ 298 (337)
T 1pby_B 236 VR-IMDVFYFSTAVNPAKT---------RAFGA--YNVLESFDLEKNASI-----KRVPLPHSYYSVNVSTDGSTVWLGG 298 (337)
T ss_dssp EE-ECSSCEEEEEECTTSS---------EEEEE--ESEEEEEETTTTEEE-----EEEECSSCCCEEEECTTSCEEEEES
T ss_pred cC-CCCCceeeEEECCCCC---------EEEEe--CCeEEEEECCCCcCc-----ceecCCCceeeEEECCCCCEEEEEc
Confidence 33 5666788999999887 88877 799999999876422 2233345688999999999877776
Q ss_pred CCCCCCCccc
Q 019326 328 GDSAPKGEEK 337 (343)
Q Consensus 328 ~~~~~~~~~~ 337 (343)
.++.+...+.
T Consensus 299 ~~~~i~v~d~ 308 (337)
T 1pby_B 299 ALGDLAAYDA 308 (337)
T ss_dssp BSSEEEEEET
T ss_pred CCCcEEEEEC
Confidence 6665554443
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=9e-25 Score=179.37 Aligned_cols=248 Identities=10% Similarity=-0.001 Sum_probs=184.1
Q ss_pred eccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCC-CeeeeEeccCC
Q 019326 6 GSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLST-SSSLGAIHHHE 82 (343)
Q Consensus 6 g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~ 82 (343)
++.++.|++||+.. ++ ...+..|...|.+++|+ +++|++++ ++.|++||+.+ ++.......+.
T Consensus 18 ~~~~~~i~~~d~~~-------~~------~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~ 83 (297)
T 2ojh_A 18 GSMRSSIEIFNIRT-------RK------MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFA 83 (297)
T ss_dssp CCCCEEEEEEETTT-------TE------EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTC
T ss_pred CCcceeEEEEeCCC-------Cc------eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccc
Confidence 45788999999876 21 12334578899999999 78888876 78999999998 87776665553
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeC--CCeEEE--EECCCcceeeeeeeccccEEEEEEecCCCEEE-EEeCCCeEEEE
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSA--DGFVSI--FDADPFVLLTSVKVHKKGVNDLAVHHSGKLAL-TVGRDDCLAMV 157 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~~d~~i~~w 157 (343)
...+.+++|+|++ ++|++++. ++...+ |+..+++ ...+..+ ..+..++|+|+++.|+ ++..++.+.+|
T Consensus 84 ~~~~~~~~~spdg-----~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~ 156 (297)
T 2ojh_A 84 TICNNDHGISPDG-----ALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIY 156 (297)
T ss_dssp CCBCSCCEECTTS-----SEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred cccccceEECCCC-----CEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEE
Confidence 5788999999999 78888883 344444 5555544 3444433 3588999999999877 77789999999
Q ss_pred Ecc--CCceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcc-cceeEEEec-CCcceEEeeecC-CCeEEEEeC
Q 019326 158 NLV--RGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAE-DAKLLCELD-GKKRILCAAPGE-NGVLFTGGE 230 (343)
Q Consensus 158 d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~-~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~ 230 (343)
++. +++..........+..++|+|+++.++.+ .++.+.+|++. .+.....+. +...+.++.|++ +++|++++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 157 SMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp EEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEE
T ss_pred EEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEc
Confidence 864 44444444455678999999999988776 48889999886 444555554 667888999984 567777765
Q ss_pred C-----------CcEEEEECCCCce--eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCC
Q 019326 231 D-----------RSITAWDTNSGKV--AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG 284 (343)
Q Consensus 231 d-----------g~i~i~d~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg 284 (343)
+ +.|++||+.+++. +..+. +|...+..++|+|++. +|++++.|.
T Consensus 237 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~---------~l~~~~~~~ 293 (297)
T 2ojh_A 237 DADVFDHPRDLDVRVQLMDMDGGNVETLFDLF-GGQGTMNSPNWSPDGD---------EFAYVRYFP 293 (297)
T ss_dssp ETTCCSCCSSEEEEEEEEETTSCSCEEEEEEE-ESTTTSCSCCBCTTSS---------EEEEEEECC
T ss_pred CCCCCcccccCceEEEEEecCCCCceeeeccC-CCCcccccceECCCCC---------EEEEEEecc
Confidence 5 5699999988765 44444 6788899999998887 888777653
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=1.7e-24 Score=199.70 Aligned_cols=294 Identities=10% Similarity=-0.016 Sum_probs=202.9
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCC---CeEEEEec--CceEEEeeCC---------CeEEEEE
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLS---PITTVAVS--GTAAASGGTD---------DTIHLYD 68 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~~--~~~l~s~~~d---------g~i~iwd 68 (343)
++..+.||.|++||+.+ + +....+.+|.. .|.+++|+ |++|++++.+ +.|.+||
T Consensus 30 ~~~~~~dg~i~~~d~~~-------g-----~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 30 FIYREQKGTVRLWNVET-------N-----TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp BCCCCSSSCEEEBCGGG-------C-----CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred EEEEeCCCCEEEEECCC-------C-----cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 34457899999999987 2 22233445554 49999999 8889988764 7888999
Q ss_pred cCCCeeeeEec---cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccE------------
Q 019326 69 LSTSSSLGAIH---HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGV------------ 133 (343)
Q Consensus 69 ~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v------------ 133 (343)
+.+++. ..+. .+ ...+..++|+|++ +.|+.++. +.|++||+.+++.......+...+
T Consensus 98 ~~~~~~-~~l~~~~~~-~~~~~~~~~SPdG-----~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~e 169 (723)
T 1xfd_A 98 IPHGDP-QSLDPPEVS-NAKLQYAGWGPKG-----QQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEE 169 (723)
T ss_dssp SSSCCC-EECCCTTCC-SCCCSBCCBCSST-----TCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHH
T ss_pred CCCCce-EeccCCccc-cccccccEECCCC-----CEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEE
Confidence 998876 3333 23 4458899999999 78888876 799999999887766555444333
Q ss_pred ------EEEEEecCCCEEEEEeCCC----------------------------------eEEEEEccCCceeEEEEc---
Q 019326 134 ------NDLAVHHSGKLALTVGRDD----------------------------------CLAMVNLVRGRRSFYHKI--- 170 (343)
Q Consensus 134 ------~~i~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~~~~~~~~--- 170 (343)
.+++|+|||+.|++++.++ .|++||+.+++.......
T Consensus 170 e~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~ 249 (723)
T 1xfd_A 170 EILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDD 249 (723)
T ss_dssp TTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCC
T ss_pred EeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCcc
Confidence 7899999999999987553 799999988875333332
Q ss_pred ----CCcceEEEEeCCCCEEEEE-eC----CcEEEEEcccceeEEEec--CCcce----EEeeec-CCCeEEE--EeCCC
Q 019326 171 ----GKEASLIKFDGSGEKFFMV-TE----EKVGIHQAEDAKLLCELD--GKKRI----LCAAPG-ENGVLFT--GGEDR 232 (343)
Q Consensus 171 ----~~~~~~~~~~~~~~~~~~~-~~----~~i~~~d~~~~~~~~~~~--~~~~i----~~~~~~-~~~~l~~--~~~dg 232 (343)
...+..++|+|++++++.. .. ..|.+||+.+++....+. +...+ ..+.|+ +++.|+. +..++
T Consensus 250 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 329 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQG 329 (723)
T ss_dssp GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCS
T ss_pred CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccC
Confidence 3457789999999988766 32 468999999988766543 33333 367888 4555553 55667
Q ss_pred ------cEEEEE-CCCCce--eEEecccccccEEE-EEEEecCCCCCCCCCCeEEEEEcCC---CcEEEEeccCccccCC
Q 019326 233 ------SITAWD-TNSGKV--AYCIEDAHSARVKG-IVVLTKNDGGSTAENPYLVASASSD---GVICVWDVRMAIKEKP 299 (343)
Q Consensus 233 ------~i~i~d-~~~~~~--~~~~~~~h~~~v~~-~~~~~~~~~~~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~~ 299 (343)
.|.+|| ...++. ...+. .+...+.. ++|+|++. .|+..+.+ +.+++|++........
T Consensus 330 ~~~~~~~l~~~d~~~~~~~~~~~~l~-~~~~~~~~~~~~spdg~---------~l~~~~~~~~~~~~~l~~~~~~~~~~~ 399 (723)
T 1xfd_A 330 GRGKFYHITVSSSQPNSSNDNIQSIT-SGDWDVTKILAYDEKGN---------KIYFLSTEDLPRRRQLYSANTVGNFNR 399 (723)
T ss_dssp SSSCEEEEEEECSSCCSSSCCCCBSC-CSSSCEEEEEEEETTTT---------EEEEEESSSCTTCCEEEEECSSTTCCC
T ss_pred CCcceeEEEEEeccCCCCccceeEee-cCCeEEEeeeEEcCCCC---------EEEEEEcCCCCcceEEEEEeCCCCCCc
Confidence 577777 344431 45555 33344444 68999887 77655544 8899999975432122
Q ss_pred Ccccc-cccccceeEEEcCCCCceeccc
Q 019326 300 LPLAE-AKTNSRLTCLAGSSTKSFKRPQ 326 (343)
Q Consensus 300 ~~~~~-~~~~~~i~~~~~s~~~~~~~~~ 326 (343)
..+.. ..+...+..++|+|++++++..
T Consensus 400 ~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 400 QCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp BCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred ceecccccCCCCeEEEEECCCCCEEEEE
Confidence 22221 1134458899999999877654
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=4.3e-24 Score=196.58 Aligned_cols=261 Identities=10% Similarity=0.015 Sum_probs=189.2
Q ss_pred CCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC--
Q 019326 43 SPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP-- 119 (343)
Q Consensus 43 ~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-- 119 (343)
..|.+++|+ ...++.+ .++.|++||+.+++..... .+ ...+.+++|+|++ +.|+++ .++.|++||+.+
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~-~~-~~~~~~~~~SpdG-----~~la~~-~~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLF-DT-NEETASLDFSPVG-----DRVAYV-RNHNLYIARGGKLG 152 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEE-CC-TTCCTTCEECTTS-----SEEEEE-ETTEEEEEECBCTT
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEcc-CC-cccccCCcCCCCC-----CEEEEE-ECCeEEEEecCccc
Confidence 579999999 4444444 4699999999988765444 34 5778899999999 778874 789999999988
Q ss_pred ---cceeeeeeecccc--------------EEEEEEecCCCEEEEEe---------------------------------
Q 019326 120 ---FVLLTSVKVHKKG--------------VNDLAVHHSGKLALTVG--------------------------------- 149 (343)
Q Consensus 120 ---~~~~~~~~~~~~~--------------v~~i~~~~~~~~l~~~~--------------------------------- 149 (343)
++.......+... +.+++|+|||++|++++
T Consensus 153 ~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~ 232 (706)
T 2z3z_A 153 EGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPS 232 (706)
T ss_dssp SCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCC
T ss_pred ccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCC
Confidence 7766544444333 47899999999999987
Q ss_pred CCCeEEEEEccCCceeEEEE---cCCcceEEEEeCCCCEEEEE-eCC-----cEEEEEcccceeEEEec---CCc---ce
Q 019326 150 RDDCLAMVNLVRGRRSFYHK---IGKEASLIKFDGSGEKFFMV-TEE-----KVGIHQAEDAKLLCELD---GKK---RI 214 (343)
Q Consensus 150 ~d~~i~~wd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~-----~i~~~d~~~~~~~~~~~---~~~---~i 214 (343)
.+..|.+||+.+++...... ....+..++|+|+++.++++ .++ .+.+||+.+++....+. +.. .+
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 45789999999887544332 23557889999999988887 554 89999999983333322 222 23
Q ss_pred EEeeecC---CCeEEEEeCCCcEEEEECC-CCceeEEecccccccEEE-EEEEecCCCCCCCCCCeEEEE-EcCCC----
Q 019326 215 LCAAPGE---NGVLFTGGEDRSITAWDTN-SGKVAYCIEDAHSARVKG-IVVLTKNDGGSTAENPYLVAS-ASSDG---- 284 (343)
Q Consensus 215 ~~~~~~~---~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~h~~~v~~-~~~~~~~~~~~~~~~~~~l~s-~~~dg---- 284 (343)
..+.|++ ++++++++.+|.+++|++. ++..+..+. .|...+.. ++|+|++. .|+. ++.++
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~-~~~~~v~~~~~~spdg~---------~l~~~~~~~~~~~~ 382 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT-KGEWEVTNFAGFDPKGT---------RLYFESTEASPLER 382 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC-CSSSCEEEEEEECTTSS---------EEEEEESSSCTTCB
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC-CCCeEEEeeeEEcCCCC---------EEEEEecCCCCceE
Confidence 5677875 4578888889999999876 677777887 77777876 79998876 6654 44454
Q ss_pred cEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccC
Q 019326 285 VICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIG 328 (343)
Q Consensus 285 ~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~ 328 (343)
.|..||+.++. ... ......+.+++|||++++++....
T Consensus 383 ~l~~~d~~~~~---~~~---l~~~~~~~~~~~spdg~~l~~~~~ 420 (706)
T 2z3z_A 383 HFYCIDIKGGK---TKD---LTPESGMHRTQLSPDGSAIIDIFQ 420 (706)
T ss_dssp EEEEEETTCCC---CEE---SCCSSSEEEEEECTTSSEEEEEEE
T ss_pred EEEEEEcCCCC---cee---ccCCCceEEEEECCCCCEEEEEec
Confidence 56666666542 111 223455889999999998776533
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=1.1e-23 Score=194.98 Aligned_cols=264 Identities=12% Similarity=0.100 Sum_probs=198.5
Q ss_pred CCCeEEEEec--CceEEEeeC-CC-----eEEEEEcCCCeeeeEeccCCCC------------------------CeEEE
Q 019326 42 LSPITTVAVS--GTAAASGGT-DD-----TIHLYDLSTSSSLGAIHHHESS------------------------SVTSL 89 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~-dg-----~i~iwd~~~~~~~~~~~~~~~~------------------------~v~~l 89 (343)
...|.+++|+ |++|++++. |+ .|++||+.+++....+..+ .. .+.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSK-VVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGG-GTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchh-hcccccccccchhhhhhhhhhhccccCccee
Confidence 4579999999 889999998 88 8999999999877766544 22 37899
Q ss_pred EEeCCCCCCCCceEEEeeCCCeEEEEECCCcc--eeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEE
Q 019326 90 AFYTPQNLSVPRNLFSTSADGFVSIFDADPFV--LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFY 167 (343)
Q Consensus 90 ~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 167 (343)
+|+|++ ++|++++. +.|++||+.+++ ....+..|...+..++|+|+|++|+.++ ++.|++||+.+++....
T Consensus 115 ~~SpDg-----~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 115 QWSPDA-----QRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp EECTTS-----SEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred EECCCC-----CEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence 999999 78888876 999999998873 4556667888899999999999999887 46999999998775543
Q ss_pred EEcCCc-----------------ceEEEEeCCCCEEEEE-eCC---------------------------------cEEE
Q 019326 168 HKIGKE-----------------ASLIKFDGSGEKFFMV-TEE---------------------------------KVGI 196 (343)
Q Consensus 168 ~~~~~~-----------------~~~~~~~~~~~~~~~~-~~~---------------------------------~i~~ 196 (343)
...... +..+.|+|+|++|+.+ .++ .|.+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 332221 4679999999999888 544 7888
Q ss_pred EEccc-ceeEEEe---cCCcceEEeeecC-CCeEEEEeC-----CCcEEEEECCCCceeEEecccccc----cEEEEEEE
Q 019326 197 HQAED-AKLLCEL---DGKKRILCAAPGE-NGVLFTGGE-----DRSITAWDTNSGKVAYCIEDAHSA----RVKGIVVL 262 (343)
Q Consensus 197 ~d~~~-~~~~~~~---~~~~~i~~~~~~~-~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~h~~----~v~~~~~~ 262 (343)
||+.+ ++..... .+...+..++| + ++.|+.++. +..|++||+.+++....+. .+.. .+..++|+
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH-ETSPTWVPLHNSLRFL 345 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEE-EECSSCCCCCSCCEEC
T ss_pred EECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEE-cCCCCcCCcCCceEEC
Confidence 99988 7765443 25677888888 6 466765543 5679999999998777666 4433 45688898
Q ss_pred ecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEE-EcCCCCceeccccC
Q 019326 263 TKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCL-AGSSTKSFKRPQIG 328 (343)
Q Consensus 263 ~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~~~~~~~ 328 (343)
|++. ++++++.||.++||.++.... ...+. .....+..+ +|+++++.++....
T Consensus 346 pdg~---------~~~~~~~~g~~~l~~~~~~~~--~~~l~--~~~~~v~~~~~~s~dg~~l~~~~~ 399 (741)
T 2ecf_A 346 DDGS---------ILWSSERTGFQHLYRIDSKGK--AAALT--HGNWSVDELLAVDEKAGLAYFRAG 399 (741)
T ss_dssp TTSC---------EEEEECTTSSCEEEEECSSSC--EEESC--CSSSCEEEEEEEETTTTEEEEEEC
T ss_pred CCCe---------EEEEecCCCccEEEEEcCCCC--eeeee--ecceEEEeEeEEeCCCCEEEEEEe
Confidence 8876 899999999989988763211 11111 223456666 59999986654433
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=1.6e-22 Score=170.54 Aligned_cols=246 Identities=11% Similarity=0.127 Sum_probs=189.4
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceE-EEeeCCCeEEEEEcCCCeeeeEeccCCCC-
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAA-ASGGTDDTIHLYDLSTSSSLGAIHHHESS- 84 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~- 84 (343)
++.|.+||..+ + +....+.. ...+..++|+ ++++ ++...++.|.+||..+++.+..+..+...
T Consensus 68 ~~~v~~~d~~~-------~-----~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 134 (353)
T 3vgz_A 68 GGVVYRLDPVT-------L-----EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKR 134 (353)
T ss_dssp SEEEEEECTTT-------C-----CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCC
T ss_pred CccEEEEcCCC-------C-----eEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcc
Confidence 56899999876 2 22222222 2346778887 6644 55566899999999999988888765111
Q ss_pred -------CeEEEEEeCCCCCCCCceEEEee--CCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEE
Q 019326 85 -------SVTSLAFYTPQNLSVPRNLFSTS--ADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLA 155 (343)
Q Consensus 85 -------~v~~l~~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~ 155 (343)
.+.+++|+|++ +++++++ .++.|.+||..+++.+..+..+...+..++|+|+++++++++.++.|.
T Consensus 135 ~~~~~~~~~~~~~~s~dg-----~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~ 209 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDAT-----NTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELI 209 (353)
T ss_dssp CSSCCCCEEEEEEEETTT-----TEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEE
T ss_pred ccccCCCCCceEEECCCC-----CEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEE
Confidence 27899999998 6666665 478999999999998888875666688999999999999999999999
Q ss_pred EEEccCCceeEEEEc-----CCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEE-
Q 019326 156 MVNLVRGRRSFYHKI-----GKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLF- 226 (343)
Q Consensus 156 ~wd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~- 226 (343)
+||+.+++....... ...+..++|+|+++.++++ .++.+.+||..+++.+..+....+ ..+.++ ++++++
T Consensus 210 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v 288 (353)
T 3vgz_A 210 TIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYV 288 (353)
T ss_dssp EEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEE
T ss_pred EEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEE
Confidence 999999988776665 2346679999999988777 558999999999998888874443 457777 455454
Q ss_pred EEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCC
Q 019326 227 TGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG 284 (343)
Q Consensus 227 ~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg 284 (343)
+...++.|.+||..+++.+..+. ....+.+++|++++. +|+.+..++
T Consensus 289 ~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~---------~l~v~~~~~ 335 (353)
T 3vgz_A 289 THRQAGKVSVIDAKSYKVVKTFD--TPTHPNSLALSADGK---------TLYVSVKQK 335 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEEE--CCSEEEEEEECTTSC---------EEEEEEECC
T ss_pred EECCCCeEEEEECCCCeEEEEEe--cCCCCCeEEEcCCCC---------EEEEEEccc
Confidence 44578999999999999888887 345789999998887 676665553
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=5.1e-23 Score=172.70 Aligned_cols=264 Identities=8% Similarity=0.088 Sum_probs=181.8
Q ss_pred eEEEeeCCCeEEEEEcC-CC--eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC-CeEEEEECC--Ccc--eeee
Q 019326 54 AAASGGTDDTIHLYDLS-TS--SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD-GFVSIFDAD--PFV--LLTS 125 (343)
Q Consensus 54 ~l~s~~~dg~i~iwd~~-~~--~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d-g~i~iwd~~--~~~--~~~~ 125 (343)
.+++++.|+.|++|+++ ++ +.+..+ .+ ...+.+++|+|++ ++|++++.+ +.|.+|+++ +++ .+..
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~spdg-----~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DV-PGQVQPMVVSPDK-----RYLYVGVRPEFRVLAYRIAPDDGALTFAAE 79 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-EC-SSCCCCEEECTTS-----SEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ec-CCCCceEEECCCC-----CEEEEeecCCCeEEEEEecCCCCceeeccc
Confidence 34455789999999995 33 333333 34 5788999999999 778888776 999999997 444 3444
Q ss_pred eeeccccEEEEEEecCCCEEEEEeC-CCeEEEEEcc---CCceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEc
Q 019326 126 VKVHKKGVNDLAVHHSGKLALTVGR-DDCLAMVNLV---RGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQA 199 (343)
Q Consensus 126 ~~~~~~~v~~i~~~~~~~~l~~~~~-d~~i~~wd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~ 199 (343)
+..+. .+..++|+|+++++++++. ++.|.+||+. ..+..........+..++|+|++++++++ .++.+.+||+
T Consensus 80 ~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 80 SALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp EECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred cccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEe
Confidence 54433 7889999999998876665 8899999994 33444444555678889999999988777 6899999999
Q ss_pred cc-ceeEE----Ee--cCCcceEEeeecC-CCeEE-EEeCCCcEEEEECCC--Cce--eEEec---ccc--cccEEEEEE
Q 019326 200 ED-AKLLC----EL--DGKKRILCAAPGE-NGVLF-TGGEDRSITAWDTNS--GKV--AYCIE---DAH--SARVKGIVV 261 (343)
Q Consensus 200 ~~-~~~~~----~~--~~~~~i~~~~~~~-~~~l~-~~~~dg~i~i~d~~~--~~~--~~~~~---~~h--~~~v~~~~~ 261 (343)
.+ ++... .+ .....+..++|++ +++++ ++..++.|.+||+.. ++. ...+. .++ ...+..++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI 238 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred cCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE
Confidence 87 65432 12 2345778899985 45554 445889999999953 432 22222 111 235678999
Q ss_pred EecCCCCCCCCCCeEEE-EEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceecccc-CCCCCCCc
Q 019326 262 LTKNDGGSTAENPYLVA-SASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQI-GDSAPKGE 335 (343)
Q Consensus 262 ~~~~~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~-~~~~~~~~ 335 (343)
+|++. +|+ +...|+.|.+||+..... ....+........+.++++++++++++... .++.+..+
T Consensus 239 s~dg~---------~l~v~~~~~~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 239 TPDGR---------HLYACDRTASLITVFSVSEDGS-VLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVY 304 (343)
T ss_dssp CTTSS---------EEEEEETTTTEEEEEEECTTSC-CEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred CCCCC---------EEEEEecCCCEEEEEEEcCCCC-ceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEE
Confidence 98876 665 666899999999983110 111222333334588999999999776666 45544443
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=3.8e-22 Score=167.91 Aligned_cols=265 Identities=12% Similarity=0.117 Sum_probs=183.1
Q ss_pred eeEEec----cCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeC---CCeEEEEEcCCC
Q 019326 2 SLIAGS----YEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGT---DDTIHLYDLSTS 72 (343)
Q Consensus 2 ~l~~g~----~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~---dg~i~iwd~~~~ 72 (343)
+|++|+ .++.|++|++... ..+...+... .+...+..++|+ ++ |++++. ++.|++|++.++
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~--------tg~~~~~~~~-~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g 73 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTT--------AKTLTNDGLL-AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ 73 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETT--------TTEEEEEEEE-EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT
T ss_pred EEEEEeccCCCCCCEEEEEEcCC--------CCeEEEeeee-eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC
Confidence 355664 3567999988751 1122332222 345677889998 56 665554 689999999877
Q ss_pred e--eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee-CCCeEEEEECCC-c--ceeeeeeec---------cccEEEEE
Q 019326 73 S--SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS-ADGFVSIFDADP-F--VLLTSVKVH---------KKGVNDLA 137 (343)
Q Consensus 73 ~--~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~-~--~~~~~~~~~---------~~~v~~i~ 137 (343)
+ .+..+..+ ...+..++|+|++ ++|++++ .++.|.+|++.. + +.+..+... ...+.+++
T Consensus 74 ~~~~~~~~~~~-~~~p~~~a~spdg-----~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 147 (347)
T 3hfq_A 74 TAHKLNTVVAP-GTPPAYVAVDEAR-----QLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTD 147 (347)
T ss_dssp EEEEEEEEEEE-SCCCSEEEEETTT-----TEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEE
T ss_pred cEEEeeeeecC-CCCCEEEEECCCC-----CEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEE
Confidence 5 44444455 6788899999999 7777777 689999999952 2 233333211 12488899
Q ss_pred EecCCCEEEEEeCCCeEEEEEcc-CCceeEEE--Ec--CCcceEEEEeCCCCEEEEE--eCCcEEEEEccc--cee--EE
Q 019326 138 VHHSGKLALTVGRDDCLAMVNLV-RGRRSFYH--KI--GKEASLIKFDGSGEKFFMV--TEEKVGIHQAED--AKL--LC 206 (343)
Q Consensus 138 ~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~--~~~--~~ 206 (343)
|+|+++++++...++.|.+|++. +++..... .. ...+..++|+|++++++++ .++.+.+|++.. ++. ..
T Consensus 148 ~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 148 LTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred ECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEee
Confidence 99999966666678999999998 45433222 22 2357789999999977765 678999999874 443 22
Q ss_pred Eec-CC------cceEEeeecC-CCeE-EEEeCCCcEEEEECCC---CceeEEecccccccEEEEEEEecCCCCCCCCCC
Q 019326 207 ELD-GK------KRILCAAPGE-NGVL-FTGGEDRSITAWDTNS---GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENP 274 (343)
Q Consensus 207 ~~~-~~------~~i~~~~~~~-~~~l-~~~~~dg~i~i~d~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 274 (343)
.+. .. ..+..++|++ +++| +++..++.|.+|++.. .+.+..+. .+...+..++|+|++.
T Consensus 228 ~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~spdg~-------- 298 (347)
T 3hfq_A 228 IVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIS-TEGDFPRDFDLDPTEA-------- 298 (347)
T ss_dssp EEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEE-CSSSCCCEEEECTTSS--------
T ss_pred eeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEe-cCCCCcCeEEECCCCC--------
Confidence 222 11 4588899985 5556 5566689999999973 24555565 5666789999999887
Q ss_pred eEEEEEcC-CCcEEEEecc
Q 019326 275 YLVASASS-DGVICVWDVR 292 (343)
Q Consensus 275 ~~l~s~~~-dg~i~vwd~~ 292 (343)
+|++++. ++.|.+|+++
T Consensus 299 -~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 299 -FVVVVNQNTDNATLYARD 316 (347)
T ss_dssp -EEEEEETTTTEEEEEEEC
T ss_pred -EEEEEEcCCCcEEEEEEe
Confidence 7877765 4899999654
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.92 E-value=8.5e-23 Score=171.83 Aligned_cols=228 Identities=9% Similarity=0.081 Sum_probs=176.1
Q ss_pred EEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceE-EEeeCCCeEEEEECCCcceee
Q 019326 48 VAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNL-FSTSADGFVSIFDADPFVLLT 124 (343)
Q Consensus 48 l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~ 124 (343)
+++. +.++++++.++.|++||+.+++.+..+..+....+..++|+|++ +++ +++..++.|.+||+.+++.+.
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg-----~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDN-----RTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTS-----SEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCC-----CEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 3444 67888999999999999999998888876522368899999998 544 566678999999999988877
Q ss_pred eeeecc------ccEEEEEEecCCCEEEEEeCC------------CeEEEEEccCCc---eeEEEEcCCcceEEEEeCCC
Q 019326 125 SVKVHK------KGVNDLAVHHSGKLALTVGRD------------DCLAMVNLVRGR---RSFYHKIGKEASLIKFDGSG 183 (343)
Q Consensus 125 ~~~~~~------~~v~~i~~~~~~~~l~~~~~d------------~~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~ 183 (343)
.+..+. ..+..++|+|+++++++++.+ +.|.+||+.+++ .......+..+.+++|+|++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 776332 237889999999999998865 899999998844 33445556678889999999
Q ss_pred CEEEEEeCCcEEEEEcccceeEEEecCCc---------------------------------------------------
Q 019326 184 EKFFMVTEEKVGIHQAEDAKLLCELDGKK--------------------------------------------------- 212 (343)
Q Consensus 184 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--------------------------------------------------- 212 (343)
+ ++++ ++.+.+||..+++....+....
T Consensus 160 ~-l~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 160 S-LYVA-GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp C-EEEE-SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred c-EEEc-cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 9 5554 4459999999988777665221
Q ss_pred ------------------ceEEeeecC--CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCC
Q 019326 213 ------------------RILCAAPGE--NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAE 272 (343)
Q Consensus 213 ------------------~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 272 (343)
.+..+++++ +++++++ ++.|.+||+.+++.+..+. ....+.+++|++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~------ 307 (349)
T 1jmx_B 238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN--LDHTYYCVAFDKKGD------ 307 (349)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE--CSSCCCEEEECSSSS------
T ss_pred EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc--CCCCccceEECCCCC------
Confidence 123344444 4567666 8899999999999888877 344578999999876
Q ss_pred CCeEEEEEcCCCcEEEEeccCcc
Q 019326 273 NPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 273 ~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+|++++.++.|++||+++++
T Consensus 308 ---~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 308 ---KLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp ---CEEEESBSSEEEEEETTTTE
T ss_pred ---EEEEecCCCeEEEEeccccc
Confidence 78888889999999998865
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=4.2e-23 Score=197.38 Aligned_cols=269 Identities=11% Similarity=0.006 Sum_probs=208.0
Q ss_pred ecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCC-CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEE
Q 019326 38 YPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLST-SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIF 115 (343)
Q Consensus 38 ~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 115 (343)
+.+|...+.++.|+ ..++++++.|+.+++|.+.. +.....+..+ ..+...+|+|++ +.|+.+ .++.|++|
T Consensus 199 l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~--~~~~~~~~SpDG-----~~la~~-~~~~i~~~ 270 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSF--TDYYPRHLNTDG-----RRILFS-KGGSIYIF 270 (1045)
T ss_dssp EECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCC--CSSCEEEEEESS-----SCEEEE-ETTEEEEE
T ss_pred CcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCC--CCcceeeEcCCC-----CEEEEE-eCCEEEEe
Confidence 36899999999999 44556777889999998764 4455566656 356778999999 677776 58999999
Q ss_pred ECCCcceeeeeee-----------ccccEEEEEEe-cCCCEEEEEeCCCeEEEEEccCCceeEEEEcCC-cceEEEEeCC
Q 019326 116 DADPFVLLTSVKV-----------HKKGVNDLAVH-HSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGK-EASLIKFDGS 182 (343)
Q Consensus 116 d~~~~~~~~~~~~-----------~~~~v~~i~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~ 182 (343)
|+...+ +..+.. |...+.+++|+ |+|+.|++++ ++.+.+|++..++......... .+..++|+ +
T Consensus 271 d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-d 347 (1045)
T 1k32_A 271 NPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-T 347 (1045)
T ss_dssp CTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-S
T ss_pred cCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-C
Confidence 995433 334443 34578999999 9999998887 7899999998877554434445 67889999 9
Q ss_pred CCEEEEE-eCCcEE-EEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEE
Q 019326 183 GEKFFMV-TEEKVG-IHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGI 259 (343)
Q Consensus 183 ~~~~~~~-~~~~i~-~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~ 259 (343)
++.++.+ .+..+. +|++.+++......+...+..++|+ ++++|++++.++.|++||+.+++....+. .|...+.++
T Consensus 348 g~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~-~~~~~v~~~ 426 (1045)
T 1k32_A 348 KVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER-SREAMITDF 426 (1045)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSSCCCCE
T ss_pred CCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc-CCCCCccce
Confidence 9988888 566777 8898877655444466789999999 46789999999999999999998877776 788999999
Q ss_pred EEEecCCCCCCCCCCeEEEEEcCCC----------cEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCC
Q 019326 260 VVLTKNDGGSTAENPYLVASASSDG----------VICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGD 329 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~s~~~dg----------~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~ 329 (343)
+|+|++. +|++++.++ .|++||+.++... .+ ..+...+..++|+|++++++....+
T Consensus 427 ~~SpDG~---------~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~---~l--~~~~~~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 427 TISDNSR---------FIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF---AA--TTENSHDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp EECTTSC---------EEEEEEEECSSTTCSCCEEEEEEEETTTTEEE---EC--SCSSSBEEEEEECTTSCEEEEEESC
T ss_pred EECCCCC---------eEEEEecCccccccCCCCCeEEEEECCCCcEE---Ee--eCCCcccCCceEcCCCCEEEEEecc
Confidence 9999987 888887654 8999999876411 11 1234457889999999998887765
Q ss_pred CCC
Q 019326 330 SAP 332 (343)
Q Consensus 330 ~~~ 332 (343)
+..
T Consensus 493 ~~~ 495 (1045)
T 1k32_A 493 SLD 495 (1045)
T ss_dssp CCC
T ss_pred cCC
Confidence 543
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=7.1e-21 Score=161.05 Aligned_cols=284 Identities=12% Similarity=0.172 Sum_probs=188.7
Q ss_pred eeEEecc----CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCC----CeEEEEEcCC
Q 019326 2 SLIAGSY----EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTD----DTIHLYDLST 71 (343)
Q Consensus 2 ~l~~g~~----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~d----g~i~iwd~~~ 71 (343)
.+++|++ ++.|++|.+... ..+...+... +...+..++|+ +++|++++.+ +.|.+|+++.
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~--------~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~ 84 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEE--------TGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDK 84 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETT--------TCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEET
T ss_pred EEEEEeccCCCCCCEEEEEEeCC--------CCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeC
Confidence 4566654 568999998752 1223444443 66778889998 7888888876 7999999875
Q ss_pred --Ce--eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee-CCCeEEEEECCCcceeeeee---ec-----------ccc
Q 019326 72 --SS--SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS-ADGFVSIFDADPFVLLTSVK---VH-----------KKG 132 (343)
Q Consensus 72 --~~--~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~---~~-----------~~~ 132 (343)
++ .+.....+ ......+++ ++ ++|++++ .++.|.+|++.....+..+. .+ ...
T Consensus 85 ~~g~~~~~~~~~~~-~~~p~~~~~--dg-----~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~ 156 (361)
T 3scy_A 85 EKGTLHLLNTQKTM-GADPCYLTT--NG-----KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPH 156 (361)
T ss_dssp TTTEEEEEEEEECS-SSCEEEEEE--CS-----SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCC
T ss_pred CCCcEEEeeEeccC-CCCcEEEEE--CC-----CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCc
Confidence 43 33344434 456777887 55 4566555 68899999996543322211 11 224
Q ss_pred EEEEEEecCCCEEEEEe-CCCeEEEEEccCCce------e--------EEEEcCCcceEEEEeCCCCEEEEE--eCCcEE
Q 019326 133 VNDLAVHHSGKLALTVG-RDDCLAMVNLVRGRR------S--------FYHKIGKEASLIKFDGSGEKFFMV--TEEKVG 195 (343)
Q Consensus 133 v~~i~~~~~~~~l~~~~-~d~~i~~wd~~~~~~------~--------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~ 195 (343)
+.+++|+|+++++++++ .++.|.+|++..... + ........+..++|+|++++++++ .++.|.
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 236 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVI 236 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEE
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEE
Confidence 57899999999766655 489999999875442 1 122234557789999999988777 589999
Q ss_pred EEEccccee--EEEec----CCcceEEeeecC-CCeEEEEeC--CCcEEEEECC--CCc--eeEEecccccccEEEEEEE
Q 019326 196 IHQAEDAKL--LCELD----GKKRILCAAPGE-NGVLFTGGE--DRSITAWDTN--SGK--VAYCIEDAHSARVKGIVVL 262 (343)
Q Consensus 196 ~~d~~~~~~--~~~~~----~~~~i~~~~~~~-~~~l~~~~~--dg~i~i~d~~--~~~--~~~~~~~~h~~~v~~~~~~ 262 (343)
+|++.+++. +..+. +......++|++ +++|+++.. ++.|.+|++. +++ .+..+. . ...+.+++|+
T Consensus 237 v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~s 314 (361)
T 3scy_A 237 AFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-T-GIHPRNFIIT 314 (361)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-C-SSCCCEEEEC
T ss_pred EEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-C-CCCCceEEEC
Confidence 999987654 23332 224467899984 567766555 4899999985 444 444454 3 5678899999
Q ss_pred ecCCCCCCCCCCeEEEEEc-CCCcEEEEecc--CccccCCCcccccccccceeEEEcC
Q 019326 263 TKNDGGSTAENPYLVASAS-SDGVICVWDVR--MAIKEKPLPLAEAKTNSRLTCLAGS 317 (343)
Q Consensus 263 ~~~~~~~~~~~~~~l~s~~-~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~i~~~~~s 317 (343)
|++. +|++++ .++.|.+|+++ ++.... +........+.|+.|.
T Consensus 315 pdg~---------~l~~~~~~~~~v~v~~~d~~~g~~~~---~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 315 PNGK---------YLLVACRDTNVIQIFERDQATGLLTD---IKKDIKVDKPVCLKFV 360 (361)
T ss_dssp TTSC---------EEEEEETTTTEEEEEEECTTTCCEEE---CSCCEECSSEEEEEEE
T ss_pred CCCC---------EEEEEECCCCCEEEEEEECCCCcEee---cceeeeCCCCeEEEEc
Confidence 9887 787776 67999997665 442211 1111122358888875
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=1e-21 Score=180.81 Aligned_cols=257 Identities=9% Similarity=0.042 Sum_probs=187.4
Q ss_pred ccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCC-----CeeeeEec
Q 019326 7 SYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLST-----SSSLGAIH 79 (343)
Q Consensus 7 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~ 79 (343)
+.++.|++||+.+ ++ ...+..+...+.+++|+ |+.|+++ .++.|++||+.+ ++......
T Consensus 98 ~~~~~i~~~d~~~-------~~------~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~ 163 (706)
T 2z3z_A 98 FTQGGLVGFDMLA-------RK------VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTI 163 (706)
T ss_dssp EETTEEEEEETTT-------TE------EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCS
T ss_pred EECCEEEEEECCC-------Cc------eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEecc
Confidence 3569999999876 21 12233567778889999 7888885 689999999998 77665444
Q ss_pred cCCCCC--------------eEEEEEeCCCCCCCCceEEEee---------------------------------CCCeE
Q 019326 80 HHESSS--------------VTSLAFYTPQNLSVPRNLFSTS---------------------------------ADGFV 112 (343)
Q Consensus 80 ~~~~~~--------------v~~l~~~~~~~~~~~~~l~s~~---------------------------------~dg~i 112 (343)
.+ ... +.++.|+|++ ++|++++ .+..|
T Consensus 164 ~~-~~~~~~g~~~~~ee~~~~~~~~~SpDg-----~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 164 DG-TETLVYGQAVHQREFGIEKGTFWSPKG-----SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CC-BTTEEESSCCGGGCTTCCCSEEECTTS-----SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred CC-CCCeEcccchhhhhcCCCceEEECCCC-----CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 44 232 4899999999 7888887 44689
Q ss_pred EEEECCCcceeeeee--eccccEEEEEEecCCCEEEEEeCCC-----eEEEEEccCCc-eeEEEEc--CC---cceEEEE
Q 019326 113 SIFDADPFVLLTSVK--VHKKGVNDLAVHHSGKLALTVGRDD-----CLAMVNLVRGR-RSFYHKI--GK---EASLIKF 179 (343)
Q Consensus 113 ~iwd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~~~~~d~-----~i~~wd~~~~~-~~~~~~~--~~---~~~~~~~ 179 (343)
++||+.+++...... .|...+.+++|+|+++.|++++.++ .|.+||+.+++ ....... .. .+..+.|
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTF 317 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEE
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCcee
Confidence 999999877554432 4667899999999999999988775 89999999983 3222222 21 2356899
Q ss_pred eC--CCCEEEEE-eCCcEEEEEcc-cceeEEEec-CCcceEE-eeecC-CCeEE-EEeCCC----cEEEEECCCCceeEE
Q 019326 180 DG--SGEKFFMV-TEEKVGIHQAE-DAKLLCELD-GKKRILC-AAPGE-NGVLF-TGGEDR----SITAWDTNSGKVAYC 247 (343)
Q Consensus 180 ~~--~~~~~~~~-~~~~i~~~d~~-~~~~~~~~~-~~~~i~~-~~~~~-~~~l~-~~~~dg----~i~i~d~~~~~~~~~ 247 (343)
+| ++++++++ .++.+.+|.+. +++.+..+. +...+.. +.|++ ++.|+ +++.++ .|..||..+++ ...
T Consensus 318 sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~ 396 (706)
T 2z3z_A 318 LPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKD 396 (706)
T ss_dssp CTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEE
T ss_pred ecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-cee
Confidence 99 99988888 77888888876 566666665 5556765 78884 45554 455554 67777887765 455
Q ss_pred ecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC----CcEEEEeccCcc
Q 019326 248 IEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD----GVICVWDVRMAI 295 (343)
Q Consensus 248 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d----g~i~vwd~~~~~ 295 (343)
+. |...+.+++|+|++. +++..+.+ +.|++||+.++.
T Consensus 397 l~--~~~~~~~~~~spdg~---------~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 397 LT--PESGMHRTQLSPDGS---------AIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SC--CSSSEEEEEECTTSS---------EEEEEEECSSCSCEEEEEESSSCE
T ss_pred cc--CCCceEEEEECCCCC---------EEEEEecCCCCCcEEEEEECCCCe
Confidence 55 677899999999887 77765433 569999998763
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=1.5e-22 Score=186.86 Aligned_cols=267 Identities=11% Similarity=-0.013 Sum_probs=188.3
Q ss_pred CCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCC---CeEEEEEeCCCCCCCCceEEEeeCC--------
Q 019326 43 SPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESS---SVTSLAFYTPQNLSVPRNLFSTSAD-------- 109 (343)
Q Consensus 43 ~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~v~~l~~~~~~~~~~~~~l~s~~~d-------- 109 (343)
..+.+++|+ |+++++ +.||.|++||+.+++....+..+ .. .|.+++|+|++ ++|++++.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~-~~~~~~v~~~~~SpDg-----~~l~~~~~~~~~~~~~~ 89 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGK-KIESLRAIRYEISPDR-----EYALFSYNVEPIYQHSY 89 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTT-TTTTTTCSEEEECTTS-----SEEEEEESCCCCSSSCC
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccc-cccccccceEEECCCC-----CEEEEEecCccceeecc
Confidence 346778898 666655 78999999999999888777766 43 49999999999 788888764
Q ss_pred -CeEEEEECCCcceeeeee---eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-CCc-----------
Q 019326 110 -GFVSIFDADPFVLLTSVK---VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-GKE----------- 173 (343)
Q Consensus 110 -g~i~iwd~~~~~~~~~~~---~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~----------- 173 (343)
+.+++||+.+++. ..+. .|...+..++|+|+|+.|+.++. +.|++||+.+++....... ...
T Consensus 90 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~ 167 (723)
T 1xfd_A 90 TGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLY 167 (723)
T ss_dssp CSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHH
T ss_pred eeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeE
Confidence 7888999988775 3333 34445889999999999999886 7999999998876554433 222
Q ss_pred -------ceEEEEeCCCCEEEEE-eCC----------------------------------cEEEEEcccceeEEEecC-
Q 019326 174 -------ASLIKFDGSGEKFFMV-TEE----------------------------------KVGIHQAEDAKLLCELDG- 210 (343)
Q Consensus 174 -------~~~~~~~~~~~~~~~~-~~~----------------------------------~i~~~d~~~~~~~~~~~~- 210 (343)
+..++|+|+|+.|+.+ .++ .+.+||+.+++....+..
T Consensus 168 ~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~ 247 (723)
T 1xfd_A 168 EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP 247 (723)
T ss_dssp HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC
T ss_pred EEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC
Confidence 2789999999999888 332 789999998876555542
Q ss_pred ------CcceEEeeecCC-CeEEEEeC----CCcEEEEECCCCceeEEecccccccEE----EEEEEecCCCCCCCCCCe
Q 019326 211 ------KKRILCAAPGEN-GVLFTGGE----DRSITAWDTNSGKVAYCIEDAHSARVK----GIVVLTKNDGGSTAENPY 275 (343)
Q Consensus 211 ------~~~i~~~~~~~~-~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~h~~~v~----~~~~~~~~~~~~~~~~~~ 275 (343)
...+..+.|+++ +++++... +..|++||+.+++....+...+...+. .++|+|+++
T Consensus 248 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~--------- 318 (723)
T 1xfd_A 248 DDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGR--------- 318 (723)
T ss_dssp CCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSC---------
T ss_pred ccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCC---------
Confidence 567889999954 56655532 357999999999877665523444443 778888876
Q ss_pred EEEE--EcCCC------cEEEEec-cCccccCCCcccccccccceeE-EEcCCCCceeccccCC
Q 019326 276 LVAS--ASSDG------VICVWDV-RMAIKEKPLPLAEAKTNSRLTC-LAGSSTKSFKRPQIGD 329 (343)
Q Consensus 276 ~l~s--~~~dg------~i~vwd~-~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~~~~~~~~ 329 (343)
.|+. +..|+ .|.+||+ ..+.......+.. ....+.. ++|+|+++.++....+
T Consensus 319 ~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~--~~~~~~~~~~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 319 KFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS--GDWDVTKILAYDEKGNKIYFLSTE 380 (723)
T ss_dssp SEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC--SSSCEEEEEEEETTTTEEEEEESS
T ss_pred eEEEEEecccCCCcceeEEEEEeccCCCCccceeEeec--CCeEEEeeeEEcCCCCEEEEEEcC
Confidence 5553 55677 4666663 3322000122211 1223443 6899999988654443
No 151
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=1.5e-20 Score=159.22 Aligned_cols=269 Identities=10% Similarity=0.141 Sum_probs=184.2
Q ss_pred eeEEeccC--CeEEEEEeecCCCCCCCCcceeeEEeEEec-CCCCCeEEEEec--CceEEEeeCCCeEEEEEcC-CCeee
Q 019326 2 SLIAGSYE--KFIWGYKLKPSNHYSSDQKTLTLTQLFSYP-AHLSPITTVAVS--GTAAASGGTDDTIHLYDLS-TSSSL 75 (343)
Q Consensus 2 ~l~~g~~d--~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~-~~~~~ 75 (343)
.|++|++. +.|.+|++... ..+...+.... ++...+..++|+ +++|++++.+ .|.+|++. +++..
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~--------~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~ 74 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDE--------KLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIV 74 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETT--------TTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEE
T ss_pred EEEEEEccCCCcEEEEEEECC--------CCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEE
Confidence 57778774 57999887641 11223232221 234567889998 7889988888 99999997 77765
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCce--EEEee-------------CCCeEEEEECC-Ccceeeeeee----ccccEEE
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRN--LFSTS-------------ADGFVSIFDAD-PFVLLTSVKV----HKKGVND 135 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~--l~s~~-------------~dg~i~iwd~~-~~~~~~~~~~----~~~~v~~ 135 (343)
........+.+.+++|+|++ ++ ++++. .+|.+.+|++. .++....+.. +...+.+
T Consensus 75 ~~~~~~~~g~~~~~~~spdg-----~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 149 (365)
T 1jof_A 75 HEASHPIGGHPRANDADTNT-----RAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHG 149 (365)
T ss_dssp EEEEEECCSSGGGGCTTSCC-----EEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEE
T ss_pred EeeEeecCCCCccEEECCCC-----CEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceE
Confidence 43321101335668999998 63 44553 68999999997 4555444432 4567899
Q ss_pred EEEecCCCEEEEEeC-CCeEEEEEcc-CCceeEE--EEc---CCcceEEEEeCCCCEEEEE--eCCcEEEEEcc--ccee
Q 019326 136 LAVHHSGKLALTVGR-DDCLAMVNLV-RGRRSFY--HKI---GKEASLIKFDGSGEKFFMV--TEEKVGIHQAE--DAKL 204 (343)
Q Consensus 136 i~~~~~~~~l~~~~~-d~~i~~wd~~-~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~--~~~~ 204 (343)
++|+|+|++++++.. ++.|.+||+. +++.... ... ...+..++|+|++++++++ .++.+.+|++. +++.
T Consensus 150 ~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 150 MVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence 999999998887664 6899999998 6764322 221 3558889999999998877 46889999765 4554
Q ss_pred E---EEec---CC----c-------ceEEee-ecC-CCeEEEEeCC-C-----cEEEEECC-CCceeE---Eeccccccc
Q 019326 205 L---CELD---GK----K-------RILCAA-PGE-NGVLFTGGED-R-----SITAWDTN-SGKVAY---CIEDAHSAR 255 (343)
Q Consensus 205 ~---~~~~---~~----~-------~i~~~~-~~~-~~~l~~~~~d-g-----~i~i~d~~-~~~~~~---~~~~~h~~~ 255 (343)
. ..+. .. . .+..++ +++ +++|+++..+ + .|.+|++. +++... ... .+...
T Consensus 230 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~-~~~~~ 308 (365)
T 1jof_A 230 VYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSP-TPTSG 308 (365)
T ss_dssp EEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEE-CSSCC
T ss_pred EEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeee-cCCCC
Confidence 2 1222 11 1 478899 884 5677766543 2 89999996 565433 132 34556
Q ss_pred EEEEEEEe---cCCCCCCCCCCeEEEEEcCC-CcEEEEeccCc
Q 019326 256 VKGIVVLT---KNDGGSTAENPYLVASASSD-GVICVWDVRMA 294 (343)
Q Consensus 256 v~~~~~~~---~~~~~~~~~~~~~l~s~~~d-g~i~vwd~~~~ 294 (343)
+..++|+| ++. +|++++.+ +.|.+|+++..
T Consensus 309 ~~~~a~sp~~~dg~---------~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 309 GHSNAVSPCPWSDE---------WMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCCCEEECTTCTT---------EEEEECSSSCEEEEEEEETT
T ss_pred cccceecCCCcCCC---------EEEEEEcCCCeEEEEEEchh
Confidence 67889999 666 88888765 89999999764
No 152
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=3.8e-21 Score=166.11 Aligned_cols=192 Identities=13% Similarity=0.066 Sum_probs=142.1
Q ss_pred eEEeccCCeEEEEEeecCCCCCCC----CcceeeEEeEEecCCCCCeEEEEec--CceEE----EeeCCCeEEEEEcCCC
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSD----QKTLTLTQLFSYPAHLSPITTVAVS--GTAAA----SGGTDDTIHLYDLSTS 72 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~----~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~----s~~~dg~i~iwd~~~~ 72 (343)
|++|+.++ +++|+.......... ...........+ .|...|++++|+ +++|+ +|+.|+.|++||+.++
T Consensus 51 l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~ 128 (434)
T 2oit_A 51 VFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTF 128 (434)
T ss_dssp EEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHH
T ss_pred EEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEcccc
Confidence 56677676 889887542110000 011111122222 367889999999 88888 8899999999998765
Q ss_pred --------ee---eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecC
Q 019326 73 --------SS---LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHS 141 (343)
Q Consensus 73 --------~~---~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~ 141 (343)
+. +..+.+| ...|.+++|+|+. +.+|++++.||+|++||++++..+....+|...|.+++|+|+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~~p~~----~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspd 203 (434)
T 2oit_A 129 SNEAKQQKRPFAYHKLLKDA-GGMVIDMKWNPTV----PSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPK 203 (434)
T ss_dssp HCTTCSSCCCSEEEECCCSG-GGSEEEEEECSSC----TTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTT
T ss_pred ccCCcCCcceeeeeeccCCC-CCceEEEEECCCC----CCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCC
Confidence 22 3455667 8999999999983 179999999999999999988777777778999999999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCceeEEEEcC--------CcceEEEEeCCCCEEEEE--eCC------cEEEEEcccc
Q 019326 142 GKLALTVGRDDCLAMVNLVRGRRSFYHKIG--------KEASLIKFDGSGEKFFMV--TEE------KVGIHQAEDA 202 (343)
Q Consensus 142 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~--~~~------~i~~~d~~~~ 202 (343)
+++|++++.||.|++||++ ++........ ..+.+++|++++.++++. .++ .+++|++++.
T Consensus 204 g~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 204 GKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp SSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9999999999999999998 4443333221 267889999988877665 332 2889999864
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=9.6e-22 Score=176.90 Aligned_cols=258 Identities=12% Similarity=0.043 Sum_probs=187.2
Q ss_pred CCCCeEEEEec--CceEEEeeC-CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC---CCeEEE
Q 019326 41 HLSPITTVAVS--GTAAASGGT-DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA---DGFVSI 114 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~---dg~i~i 114 (343)
+..+|.+++|+ |+.||+++. ||+++||++++++... +..++...+..++|+|+. .+++++. +....+
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd~------~l~~~~~~~g~~~~~l 92 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVGR------VILVRDVSKGAEQHAL 92 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCSE------EEEEEECSTTSCCEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCCe------EEEEeccCCCCcceEE
Confidence 35689999998 889998887 9999999997766544 444414689999999873 6777665 455566
Q ss_pred EECCC---cceeeeeeeccccEEEEEEecCCCE-EEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-
Q 019326 115 FDADP---FVLLTSVKVHKKGVNDLAVHHSGKL-ALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV- 189 (343)
Q Consensus 115 wd~~~---~~~~~~~~~~~~~v~~i~~~~~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 189 (343)
|.++. +... .+.. ...+...+|+|+++. +++.+.++.+.+||+.+++......... ..++|+|+|+.++.+
T Consensus 93 ~~~~~~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~ 168 (582)
T 3o4h_A 93 FKVNTSRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLG 168 (582)
T ss_dssp EEEETTSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEE
T ss_pred EEEeccCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEE
Confidence 55432 2222 3322 223446688888753 3344444555699999987665554444 889999999999977
Q ss_pred eC----CcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCC--cEEEEECCCCceeEEecccccccEEEEE--
Q 019326 190 TE----EKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDR--SITAWDTNSGKVAYCIEDAHSARVKGIV-- 260 (343)
Q Consensus 190 ~~----~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~h~~~v~~~~-- 260 (343)
.+ ..|++||+.+++......+...+..++|+ +++.|+++..++ .|++||+.+++.. .+. .|...+..++
T Consensus 169 ~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~-~~~~~~~~~~~~ 246 (582)
T 3o4h_A 169 FFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE-LPSKDFSSYRPT 246 (582)
T ss_dssp EEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC-CSCSHHHHHCCS
T ss_pred EcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc-CCCcChhhhhhc
Confidence 55 67999999988876555577888999999 467888888888 8999999988877 665 7777776666
Q ss_pred ------EEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 261 ------VLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 261 ------~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
|+|++. ++++++.||++++|++ ++... .....+.+++++ ++++++....+.
T Consensus 247 ~~~~~~~spdg~---------~~~~~~~~g~~~l~~~--g~~~~-------~~~~~v~~~~~s-dg~~l~~~s~~~ 303 (582)
T 3o4h_A 247 AITWLGYLPDGR---------LAVVARREGRSAVFID--GERVE-------APQGNHGRVVLW-RGKLVTSHTSLS 303 (582)
T ss_dssp EEEEEEECTTSC---------EEEEEEETTEEEEEET--TEEEC-------CCSSEEEEEEEE-TTEEEEEEEETT
T ss_pred cccceeEcCCCc---------EEEEEEcCCcEEEEEE--CCeec-------cCCCceEEEEec-CCEEEEEEcCCC
Confidence 888875 9999999999999999 43222 112458889999 888877666554
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=8.5e-21 Score=159.57 Aligned_cols=226 Identities=12% Similarity=0.097 Sum_probs=171.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC-CCeEEEEec--CceE-EEeeCCCeEEEEEcCCCeeeeE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL-SPITTVAVS--GTAA-ASGGTDDTIHLYDLSTSSSLGA 77 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~--~~~l-~s~~~dg~i~iwd~~~~~~~~~ 77 (343)
.+++++.++.|++||..+ + +....+..+. ..+..++|+ ++.+ +++..++.|.+||+.+++.+..
T Consensus 13 ~~v~~~~~~~v~~~d~~~-------~-----~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVAS-------D-----TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp EEEEEETTTEEEEEETTT-------T-----EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCeEEEEECCC-------C-----cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence 367888999999999876 2 2333333332 257788888 6554 4556789999999999988877
Q ss_pred eccCC-----CCCeEEEEEeCCCCCCCCceEEEeeCC------------CeEEEEECCCccee---eeeeeccccEEEEE
Q 019326 78 IHHHE-----SSSVTSLAFYTPQNLSVPRNLFSTSAD------------GFVSIFDADPFVLL---TSVKVHKKGVNDLA 137 (343)
Q Consensus 78 ~~~~~-----~~~v~~l~~~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~---~~~~~~~~~v~~i~ 137 (343)
+...+ ...+..++|+|++ +++++++.+ +.|.+||+.+++.. ..+. +...+.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg-----~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~ 154 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDG-----KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMR 154 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTS-----SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEE
T ss_pred EEcccccccccccccceEECCCC-----CEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCccccee
Confidence 76441 1237889999999 788888865 89999999885433 3333 344688999
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCC---------------------------------------------
Q 019326 138 VHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGK--------------------------------------------- 172 (343)
Q Consensus 138 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~--------------------------------------------- 172 (343)
|+|+++ +++++. .|.+||+.+++.........
T Consensus 155 ~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 231 (349)
T 1jmx_B 155 AADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADL 231 (349)
T ss_dssp ECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEE
T ss_pred ECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccc
Confidence 999999 555544 49999998887655443321
Q ss_pred ------------------------cceEEEEeC-CCCEEEEEeCCcEEEEEcccceeEEEecCCcceEEeeecC-CCeEE
Q 019326 173 ------------------------EASLIKFDG-SGEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVLF 226 (343)
Q Consensus 173 ------------------------~~~~~~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~ 226 (343)
.+..++++| ++++++++ ++.|.+||+.+++.+..+.....+.++++++ +++|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 310 (349)
T 1jmx_B 232 LYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLY 310 (349)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEE
T ss_pred ceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEE
Confidence 234566779 99999888 8899999999999988887666778899984 56788
Q ss_pred EEeCCCcEEEEECCCCceeEEec
Q 019326 227 TGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 227 ~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
+++.++.|.+||..+++.+..+.
T Consensus 311 ~~~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 311 LGGTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp EESBSSEEEEEETTTTEEEEEEE
T ss_pred EecCCCeEEEEeccccceeeeee
Confidence 88889999999999999888876
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=6.4e-21 Score=182.41 Aligned_cols=279 Identities=10% Similarity=-0.002 Sum_probs=208.9
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
+++++.++.+.+|.+.... .....+..|. .+..++|+ |+.|+++ .++.|.+|++... .+..+..
T Consensus 217 ~~~~~~dg~~~l~~~~~~g-----------~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~-~l~~l~~ 282 (1045)
T 1k32_A 217 YFITDIDGFGQIYSTDLDG-----------KDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTE-KIEKIEI 282 (1045)
T ss_dssp EEEECTTSSCEEEEEETTS-----------CSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTC-CEEECCC
T ss_pred EEEEeccCceEEEEEeCCC-----------CcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCce-Eeeeecc
Confidence 3456678889999886411 1122333444 35566777 7878877 4899999999544 3334444
Q ss_pred C----------CCCCeEEEEEe-CCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccc-cEEEEEEecCCCEEEEE
Q 019326 81 H----------ESSSVTSLAFY-TPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKK-GVNDLAVHHSGKLALTV 148 (343)
Q Consensus 81 ~----------~~~~v~~l~~~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~i~~~~~~~~l~~~ 148 (343)
+ +...+.+++|+ |++ +.|++++ ++.|.+|+..+++.. .+..|.. .+..++|+ +++.|+.+
T Consensus 283 ~~~~~~~~~~~~~~~v~~~~~S~pdG-----~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~ 354 (1045)
T 1k32_A 283 GDLESPEDRIISIPSKFAEDFSPLDG-----DLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHG 354 (1045)
T ss_dssp CCCCBCCSEEEECGGGGEEEEEECGG-----GCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEE
T ss_pred CcccccccccccccccceeeecCCCC-----CEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEE
Confidence 2 03468999999 999 7788877 789999999876644 3556777 89999999 99999999
Q ss_pred eCCCeEE-EEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEe-cCCcceEEeeecC-CCe
Q 019326 149 GRDDCLA-MVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCEL-DGKKRILCAAPGE-NGV 224 (343)
Q Consensus 149 ~~d~~i~-~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~-~~~~~i~~~~~~~-~~~ 224 (343)
+.++.+. +||+.+++..........+..++|+|+++.++++ .++.+++||+.+++..... .+...+.+++|++ +++
T Consensus 355 s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~ 434 (1045)
T 1k32_A 355 TREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRF 434 (1045)
T ss_dssp ETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCE
T ss_pred ECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCe
Confidence 9888898 9999887654444444678899999999999988 7889999999999888777 4777889999994 567
Q ss_pred EEEEeCCC----------cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 225 LFTGGEDR----------SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 225 l~~~~~dg----------~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
|++++.++ .|++||+.+++ +..+. .|...+..++|+|++. +|++++.++...+|+....
T Consensus 435 la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~-~~~~~~~~~~~spdG~---------~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 435 IAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAAT-TENSHDYAPAFDADSK---------NLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp EEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECS-CSSSBEEEEEECTTSC---------EEEEEESCCCCCEECSSSS
T ss_pred EEEEecCccccccCCCCCeEEEEECCCCc-EEEee-CCCcccCCceEcCCCC---------EEEEEecccCCcCcchhcc
Confidence 77776544 89999999887 66676 7888899999999887 9999999999999987643
Q ss_pred cccCCCcccccccccceeEEEcCCCCc
Q 019326 295 IKEKPLPLAEAKTNSRLTCLAGSSTKS 321 (343)
Q Consensus 295 ~~~~~~~~~~~~~~~~i~~~~~s~~~~ 321 (343)
.. .+.....+..+.++++..
T Consensus 504 ~~-------~~~~~~~~~~~~~~~~~~ 523 (1045)
T 1k32_A 504 NF-------SFEVVSKPFVIPLIPGSP 523 (1045)
T ss_dssp CE-------ECCSCBEEEEEESSTTCC
T ss_pred cc-------ccccCceeEEEEeCCCCC
Confidence 21 112233455566655443
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=8.8e-20 Score=153.44 Aligned_cols=255 Identities=12% Similarity=0.083 Sum_probs=170.2
Q ss_pred CCCeEEEEEcC--CCeeee-EeccCCCCCeEEEEEeCCCCCCCCceEEEeeC---CCeEEEEECCCcc--eeeeeeeccc
Q 019326 60 TDDTIHLYDLS--TSSSLG-AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA---DGFVSIFDADPFV--LLTSVKVHKK 131 (343)
Q Consensus 60 ~dg~i~iwd~~--~~~~~~-~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~--~~~~~~~~~~ 131 (343)
.++.|.+|+++ +++... ....+ ...+..++|+|++ + |++++. ++.|.+|++.+++ .+..+..+..
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~-~~~p~~~a~spdg-----~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~ 86 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAA-TQNPTYLALSAKD-----C-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGT 86 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEE-CSCCCCEEECTTC-----E-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESC
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeec-cCCcceEEEccCC-----e-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCC
Confidence 35667777665 455433 22334 4677889999998 6 555554 6899999997655 4445555777
Q ss_pred cEEEEEEecCCCEEEEEe-CCCeEEEEEccC-Cce--eEEEEcC----------CcceEEEEeCCCCEEEEE-eCCcEEE
Q 019326 132 GVNDLAVHHSGKLALTVG-RDDCLAMVNLVR-GRR--SFYHKIG----------KEASLIKFDGSGEKFFMV-TEEKVGI 196 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~-~d~~i~~wd~~~-~~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~i~~ 196 (343)
.+..++|+|++++|++++ .++.+.+|++.. +.. +...... ..+..++|+|+++.+++. .++.+.+
T Consensus 87 ~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~ 166 (347)
T 3hfq_A 87 PPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYV 166 (347)
T ss_dssp CCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEE
Confidence 889999999999888887 689999999963 332 2222221 136789999999955555 6889999
Q ss_pred EEcc-cceeEE--Eec--CCcceEEeeecC-CCeEEE-EeCCCcEEEEECCC--Cce--eEEeccccc------ccEEEE
Q 019326 197 HQAE-DAKLLC--ELD--GKKRILCAAPGE-NGVLFT-GGEDRSITAWDTNS--GKV--AYCIEDAHS------ARVKGI 259 (343)
Q Consensus 197 ~d~~-~~~~~~--~~~--~~~~i~~~~~~~-~~~l~~-~~~dg~i~i~d~~~--~~~--~~~~~~~h~------~~v~~~ 259 (343)
|++. +++... .+. ....+..++|++ ++++++ +..++.|.+|++.. ++. +..+. ... ..+..+
T Consensus 167 ~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~i 245 (347)
T 3hfq_A 167 YNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK-TIPADYTAHNGAAAI 245 (347)
T ss_dssp EEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE-SSCTTCCSCCEEEEE
T ss_pred EEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee-ecCCCCCCCCcceeE
Confidence 9998 454332 222 334577889985 554554 56789999999874 442 22332 221 458899
Q ss_pred EEEecCCCCCCCCCCeEE-EEEcCCCcEEEEeccCccccCCCccccccc-ccceeEEEcCCCCceeccccCC-CCCC
Q 019326 260 VVLTKNDGGSTAENPYLV-ASASSDGVICVWDVRMAIKEKPLPLAEAKT-NSRLTCLAGSSTKSFKRPQIGD-SAPK 333 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~~~~~~~~-~~~~ 333 (343)
+|+|++. +| ++...++.|.+|++.... ....+..... ...+..++|+|++++++....+ +...
T Consensus 246 ~~spdG~---------~l~v~~~~~~~v~v~~~~~~g--~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 246 RLSHDGH---------FLYVSNRGYNTLAVFAVTADG--HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNAT 311 (347)
T ss_dssp EECTTSC---------EEEEEEETTTEEEEEEECGGG--CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEE
T ss_pred EECCCCC---------EEEEEeCCCCEEEEEEECCCC--cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEE
Confidence 9999887 66 566678999999997431 1112222222 3457899999999977665543 4333
No 157
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=4.7e-21 Score=165.53 Aligned_cols=193 Identities=12% Similarity=0.054 Sum_probs=145.6
Q ss_pred CCCeEEEEec--CceEEEeeCCCeEEEEEcCCCe----------eeeE-----eccCCCCCeEEEEEeCCCCCCCCceEE
Q 019326 42 LSPITTVAVS--GTAAASGGTDDTIHLYDLSTSS----------SLGA-----IHHHESSSVTSLAFYTPQNLSVPRNLF 104 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~----------~~~~-----~~~~~~~~v~~l~~~~~~~~~~~~~l~ 104 (343)
...++.++++ +.++++++.++ +++|+..... .+.. ...+ ...|.+++|+|++ ++|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~l~~spdg-----~~la 108 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPM-KFPIHHLALSCDN-----LTLS 108 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECC-SSCEEEEEECTTS-----CEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccC-CCcccEEEEcCCC-----CEEE
Confidence 3457788887 78899998888 8998764211 0110 1123 5679999999999 7888
Q ss_pred ----EeeCCCeEEEEECCCc--------ce---eeeeeeccccEEEEEEecC-CCEEEEEeCCCeEEEEEccCCceeEE-
Q 019326 105 ----STSADGFVSIFDADPF--------VL---LTSVKVHKKGVNDLAVHHS-GKLALTVGRDDCLAMVNLVRGRRSFY- 167 (343)
Q Consensus 105 ----s~~~dg~i~iwd~~~~--------~~---~~~~~~~~~~v~~i~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~- 167 (343)
+|+.|+.|++||+.+. +. +..+.+|...|.+++|+|+ +.+|++++.||+|++||++++.....
T Consensus 109 v~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~ 188 (434)
T 2oit_A 109 ACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT 188 (434)
T ss_dssp EEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE
T ss_pred EEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec
Confidence 7889999999998654 22 3455679999999999998 78999999999999999998865433
Q ss_pred EEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec--------CCcceEEeeecCCCeEEE--EeCCC----
Q 019326 168 HKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD--------GKKRILCAAPGENGVLFT--GGEDR---- 232 (343)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~--------~~~~i~~~~~~~~~~l~~--~~~dg---- 232 (343)
..+...+.+++|+|++++++++ .|+.|++||.+ ++....+. |...+.++.|+++..+++ +..+|
T Consensus 189 ~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 189 LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET 267 (434)
T ss_dssp ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence 2345789999999999999999 89999999998 55555443 123789999986554442 33343
Q ss_pred --cEEEEECCCC
Q 019326 233 --SITAWDTNSG 242 (343)
Q Consensus 233 --~i~i~d~~~~ 242 (343)
.+++|++++.
T Consensus 268 ~~~v~i~~l~~~ 279 (434)
T 2oit_A 268 SPDVVMALLPKK 279 (434)
T ss_dssp CCEEEEEECCCT
T ss_pred CCceEEEEeccC
Confidence 3899999865
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=2.7e-20 Score=167.51 Aligned_cols=253 Identities=12% Similarity=0.079 Sum_probs=178.5
Q ss_pred eeEEecc-CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC-CCeEEEEec-CceEEEeeC---CCeEEEEEcCC--Ce
Q 019326 2 SLIAGSY-EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL-SPITTVAVS-GTAAASGGT---DDTIHLYDLST--SS 73 (343)
Q Consensus 2 ~l~~g~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~-~~~l~s~~~---dg~i~iwd~~~--~~ 73 (343)
+|+.++. ||.++||++.. + . ...+..|. ..+.+++|+ .+.+++++. +...++|.+.. ..
T Consensus 35 ~la~~s~~~g~~~lw~~~~-------g-----~-~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g 101 (582)
T 3o4h_A 35 KLLVVGFSEGSVNAYLYDG-------G-----E-TVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPG 101 (582)
T ss_dssp EEEEEEEETTEEEEEEEET-------T-----E-EEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTT
T ss_pred eEEEEEccCCceeEEEEcC-------C-----C-cEeeecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCCC
Confidence 4666666 99999999865 1 1 22333454 689999999 555665554 45566665543 22
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC--
Q 019326 74 SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD-- 151 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d-- 151 (343)
....+... ..+...+|+|+++ ..+++.+.++.+.+||+.+++.......+ . .+++|+|||+.|++++.+
T Consensus 102 ~~~~l~~~--~~~~~~~~s~dg~----~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 102 EEQRLEAV--KPMRILSGVDTGE----AVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp CCEECTTS--CSBEEEEEEECSS----CEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEET
T ss_pred ccccccCC--CCceeeeeCCCCC----eEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCC
Confidence 22244333 3455678888872 34444444455569999888765554433 3 789999999999988877
Q ss_pred --CeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCC--cEEEEEcccceeEEEec-CCcceEEee-------
Q 019326 152 --DCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEE--KVGIHQAEDAKLLCELD-GKKRILCAA------- 218 (343)
Q Consensus 152 --~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~i~~~d~~~~~~~~~~~-~~~~i~~~~------- 218 (343)
+.|++||+.+++..........+..++|+|+|+.++++ .++ .|.+||+.+++.. .+. +...+..+.
T Consensus 173 ~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWL 251 (582)
T ss_dssp TEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEE
T ss_pred CCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccce
Confidence 78999999988876555566778899999999999977 667 8999999998877 444 445555556
Q ss_pred -ecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCC---cEEEEeccC
Q 019326 219 -PGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG---VICVWDVRM 293 (343)
Q Consensus 219 -~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg---~i~vwd~~~ 293 (343)
|++ +.++++++.++.+++|++ ++... .+...+.+++|+ ++. ++++++.+. .+.+||...
T Consensus 252 ~~spdg~~~~~~~~~g~~~l~~~--g~~~~----~~~~~v~~~~~s-dg~---------~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 252 GYLPDGRLAVVARREGRSAVFID--GERVE----APQGNHGRVVLW-RGK---------LVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EECTTSCEEEEEEETTEEEEEET--TEEEC----CCSSEEEEEEEE-TTE---------EEEEEEETTEEEEEEEETTCC
T ss_pred eEcCCCcEEEEEEcCCcEEEEEE--CCeec----cCCCceEEEEec-CCE---------EEEEEcCCCCCCeEEEEcCCC
Confidence 884 567888999999999999 65443 244678899998 665 888887774 467777654
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=5.6e-21 Score=176.18 Aligned_cols=291 Identities=9% Similarity=-0.017 Sum_probs=191.0
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCC---CeEEEEec--CceEEEeeC---------CCeEEEEE
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLS---PITTVAVS--GTAAASGGT---------DDTIHLYD 68 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~~--~~~l~s~~~---------dg~i~iwd 68 (343)
++..+.|+.|++||+.+ ++ ....+.+|.. .+.+++|+ |++|++++. ++.|++||
T Consensus 29 ~~~~~~d~~i~~~~~~~-------g~-----~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 29 YLHQSADNNIVLYNIET-------GQ-----SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp EEEECTTSCEEEEESSS-------CC-----EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred EEEEcCCCCEEEEEcCC-------Cc-----EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 55566799999999987 22 2222333333 48899999 888988876 78999999
Q ss_pred cCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee-eeccccE--------------
Q 019326 69 LSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV-KVHKKGV-------------- 133 (343)
Q Consensus 69 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~v-------------- 133 (343)
+.+++.+.... . ...+..++|+|++ +.|+.+. ++.|++||+.+++..... .++...|
T Consensus 97 ~~~g~~~~~~~-l-~~~~~~~~~SPDG-----~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~ 168 (719)
T 1z68_A 97 LSNGEFVRGNE-L-PRPIQYLCWSPVG-----SKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEML 168 (719)
T ss_dssp TTTTEECCSSC-C-CSSBCCEEECSST-----TCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTT
T ss_pred CCCCcccccee-c-CcccccceECCCC-----CEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecc
Confidence 99987632111 1 2568889999999 7888775 789999999887765432 2222222
Q ss_pred ---EEEEEecCCCEEEEEeCCC----------------------------------eEEEEEccCCcee--EEE------
Q 019326 134 ---NDLAVHHSGKLALTVGRDD----------------------------------CLAMVNLVRGRRS--FYH------ 168 (343)
Q Consensus 134 ---~~i~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~~~--~~~------ 168 (343)
.+++|+|||+.|++++.|. .|++||+.+++.. ...
T Consensus 169 ~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 248 (719)
T 1z68_A 169 ATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMI 248 (719)
T ss_dssp CSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHH
T ss_pred cCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccC
Confidence 4899999999999988652 7889999887642 111
Q ss_pred -EcCCcceEEEEeCCCCEEEEE-eCC----cEEEEE----cccceeEEEe-----cCCcceE-----EeeecC-CCeEE-
Q 019326 169 -KIGKEASLIKFDGSGEKFFMV-TEE----KVGIHQ----AEDAKLLCEL-----DGKKRIL-----CAAPGE-NGVLF- 226 (343)
Q Consensus 169 -~~~~~~~~~~~~~~~~~~~~~-~~~----~i~~~d----~~~~~~~~~~-----~~~~~i~-----~~~~~~-~~~l~- 226 (343)
.....+..++|+|+++.+++. ... .|.+|| ..+++....+ .+...+. .+.|++ ++.++
T Consensus 249 ~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 249 ASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp HTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred CCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEE
Confidence 123457889999998777665 322 488899 7777655444 2444454 677874 45443
Q ss_pred -EEeCCC--cEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcC-----CCcEEEEeccCccc-c
Q 019326 227 -TGGEDR--SITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASS-----DGVICVWDVRMAIK-E 297 (343)
Q Consensus 227 -~~~~dg--~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~-----dg~i~vwd~~~~~~-~ 297 (343)
++..+| .|.+||+.+++ ...+. .+...+..+.+. ++. .|+..+. ++..++|.+..... .
T Consensus 329 ~~~~~~g~~~l~~~~~~~~~-~~~lt-~~~~~v~~~~~~-d~~---------~i~~~~~~~~~~~~~~~l~~~~~~~g~~ 396 (719)
T 1z68_A 329 IFSDKDGYKHIHYIKDTVEN-AIQIT-SGKWEAINIFRV-TQD---------SLFYSSNEFEEYPGRRNIYRISIGSYPP 396 (719)
T ss_dssp EEECTTSCEEEEEESSCSTT-CEECS-CSSSCEEEEEEE-CSS---------EEEEEESCGGGCTTCBEEEEEECSSSSC
T ss_pred EEEccCCceEEEEEECCCCc-eEecc-cCceEEEEEEEE-eCC---------EEEEEEecCCCCCceEEEEEEeCCCCCC
Confidence 344555 57777887766 55666 566667777777 554 5555444 48899998875211 0
Q ss_pred CCCcccc-cc-cccceeEEEcCCCCceecc
Q 019326 298 KPLPLAE-AK-TNSRLTCLAGSSTKSFKRP 325 (343)
Q Consensus 298 ~~~~~~~-~~-~~~~i~~~~~s~~~~~~~~ 325 (343)
....+.. .. ....+..+.|++++++++.
T Consensus 397 ~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~ 426 (719)
T 1z68_A 397 SKKCVTCHLRKERCQYYTASFSDYAKYYAL 426 (719)
T ss_dssp CEEESSTTTTTTTBCBEEEEECGGGSSEEE
T ss_pred CceeccCccCCCCCceEEEEECCCCCEEEE
Confidence 1111111 11 2234677888888876654
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=3.1e-18 Score=144.78 Aligned_cols=247 Identities=10% Similarity=0.120 Sum_probs=166.6
Q ss_pred eEEeccC----CeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEee-CCCeEEEEEcCCCeeeeE
Q 019326 3 LIAGSYE----KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGG-TDDTIHLYDLSTSSSLGA 77 (343)
Q Consensus 3 l~~g~~d----~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~ 77 (343)
|++++.+ +.|.+|++... ....+.+.....+......+++++++|++++ .++.|.+|++.....+..
T Consensus 64 l~~~~~~~~~~~~v~~~~~~~~--------~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~ 135 (361)
T 3scy_A 64 VYSVNEFSKDQAAVSAFAFDKE--------KGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLP 135 (361)
T ss_dssp EEEEECCSSTTCEEEEEEEETT--------TTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCS
T ss_pred EEEEEccCCCCCcEEEEEEeCC--------CCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcc
Confidence 5666664 79999999751 1124455555556667788888877777666 588999999975433321
Q ss_pred e------ccC-------CCCCeEEEEEeCCCCCCCCceEEEee-CCCeEEEEECCCcce------e------eee-eecc
Q 019326 78 I------HHH-------ESSSVTSLAFYTPQNLSVPRNLFSTS-ADGFVSIFDADPFVL------L------TSV-KVHK 130 (343)
Q Consensus 78 ~------~~~-------~~~~v~~l~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~------~------~~~-~~~~ 130 (343)
+ .+. ....+.+++|+|++ +++++++ .++.|.+|++..... + ... ..+.
T Consensus 136 ~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg-----~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 210 (361)
T 3scy_A 136 ASDVIEFKGSGPDKERQTMPHLHCVRITPDG-----KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPG 210 (361)
T ss_dssp CSEEEECCCCCSCTTTCSSCCEEEEEECTTS-----SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTT
T ss_pred cceeEEccCCCCCccccCCCcceEEEECCCC-----CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCC
Confidence 1 110 02345889999999 6555544 588999999865331 1 111 2234
Q ss_pred ccEEEEEEecCCCEEEEEe-CCCeEEEEEccCCceeEEEEcC------CcceEEEEeCCCCEEEEE--e-CCcEEEEEcc
Q 019326 131 KGVNDLAVHHSGKLALTVG-RDDCLAMVNLVRGRRSFYHKIG------KEASLIKFDGSGEKFFMV--T-EEKVGIHQAE 200 (343)
Q Consensus 131 ~~v~~i~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~--~-~~~i~~~d~~ 200 (343)
..+..++|+|+++++++++ .++.|.+||+.+++........ ..+..++|+|++++++++ . ++.+.+|++.
T Consensus 211 ~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 211 SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 5678999999999887777 6899999999977543322221 235689999999998777 3 5789999986
Q ss_pred --cce--eEEEecCCcceEEeeecC-CCeEEEEe-CCCcEEEE--ECCCCceeEEecccccccEEEEEEE
Q 019326 201 --DAK--LLCELDGKKRILCAAPGE-NGVLFTGG-EDRSITAW--DTNSGKVAYCIEDAHSARVKGIVVL 262 (343)
Q Consensus 201 --~~~--~~~~~~~~~~i~~~~~~~-~~~l~~~~-~dg~i~i~--d~~~~~~~~~~~~~h~~~v~~~~~~ 262 (343)
+++ .+..+.....+..++|++ +++|++++ .++.|.+| |..+++........+...+.++.|.
T Consensus 291 ~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 291 ETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp TTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 344 344444445677899984 56677776 67899996 5556765544332455678888875
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.85 E-value=6.4e-19 Score=150.43 Aligned_cols=276 Identities=10% Similarity=0.008 Sum_probs=188.1
Q ss_pred EeEEecCCCCCeEE-----EEec--CceEEEeeC-CC--eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceE
Q 019326 34 QLFSYPAHLSPITT-----VAVS--GTAAASGGT-DD--TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNL 103 (343)
Q Consensus 34 ~~~~~~~h~~~v~~-----l~~~--~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l 103 (343)
....+..|...... .+|+ |++|+.++. +| .|.+||+.+++.......+ ...+..+.|+|++ +.|
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~-~~~~~~~~~spdg-----~~l 95 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGR-GDNTFGGFLSPDD-----DAL 95 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSS-CBCSSSCEECTTS-----SEE
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCC-CCCccceEEcCCC-----CEE
Confidence 34555666665555 7788 888888877 66 4888899998877766666 5555577899999 799
Q ss_pred EEeeCCCeEEEEECCCcceeeeeeeccccEEEEE--EecCCCEEEEE----------------------eCCCeEEEEEc
Q 019326 104 FSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLA--VHHSGKLALTV----------------------GRDDCLAMVNL 159 (343)
Q Consensus 104 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~--~~~~~~~l~~~----------------------~~d~~i~~wd~ 159 (343)
+.++.++.|++||+.+++....+..+...+.... ++|+++.++.. ..+..|.+||+
T Consensus 96 ~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 175 (388)
T 3pe7_A 96 FYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL 175 (388)
T ss_dssp EEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET
T ss_pred EEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEEC
Confidence 9999999999999999887776666666554444 48899888743 24578999999
Q ss_pred cCCceeEEEEcCCcceEEEEeC-CCCEEEEE-e------CCcEEEEEcccceeEEEecCC--cceEEeeecC-CCeEEE-
Q 019326 160 VRGRRSFYHKIGKEASLIKFDG-SGEKFFMV-T------EEKVGIHQAEDAKLLCELDGK--KRILCAAPGE-NGVLFT- 227 (343)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~------~~~i~~~d~~~~~~~~~~~~~--~~i~~~~~~~-~~~l~~- 227 (343)
.+++..........+..+.|+| +++.++.. . ...|.++|...++......+. ..+....|++ ++.|+.
T Consensus 176 ~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 176 KTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp TTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred CCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEE
Confidence 9998777767777788999999 99988877 3 236888887765544333333 3577888984 555544
Q ss_pred EeCCC----cEEEEECCCCcee--EEeccccccc---EEEEEEEecCCCCCCCCCCeEEEEE---------cCCCcEEEE
Q 019326 228 GGEDR----SITAWDTNSGKVA--YCIEDAHSAR---VKGIVVLTKNDGGSTAENPYLVASA---------SSDGVICVW 289 (343)
Q Consensus 228 ~~~dg----~i~i~d~~~~~~~--~~~~~~h~~~---v~~~~~~~~~~~~~~~~~~~~l~s~---------~~dg~i~vw 289 (343)
+..++ .|++||+.+++.. ..+. ++... ...+.|+|++. .|+.. ..+..|++|
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~~~~~~~spdg~---------~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPETLENRQLTSMP-ACSHLMSNYDGSLMVGDGS---------DAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp EEETTCCCEEEEEECTTTCCEEEEEEEC-CEEEEEECTTSSEEEEEEC---------CC------------CCCCEEEEE
T ss_pred ecCCCCCcceEEEEecCCCceEEEEcCC-CceeeeecCCCCeEccCCC---------cceeEeeeccccccCCCCEEEEE
Confidence 33322 3999999988743 3333 21111 12236788876 55543 556789999
Q ss_pred eccCccccCCCccccccc---------ccceeEEEcCCCCceeccccC
Q 019326 290 DVRMAIKEKPLPLAEAKT---------NSRLTCLAGSSTKSFKRPQIG 328 (343)
Q Consensus 290 d~~~~~~~~~~~~~~~~~---------~~~i~~~~~s~~~~~~~~~~~ 328 (343)
|+.++... .+..... ...+.+++|+||++.++....
T Consensus 326 d~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 326 NMKNGTQH---RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp ETTTTEEE---EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred eccCCceE---EeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 99886421 1111110 114678899999988776554
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=1.2e-17 Score=139.21 Aligned_cols=238 Identities=12% Similarity=0.059 Sum_probs=180.8
Q ss_pred CCCCeEEEEec--CceEEEeeCC------------------------CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCC
Q 019326 41 HLSPITTVAVS--GTAAASGGTD------------------------DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTP 94 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~d------------------------g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~ 94 (343)
-.+.+.+++++ |+++++...+ +.|.+||..+++.+..+....-.....++++++
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 35679999998 7777777666 479999999898877665332568899999999
Q ss_pred CCCCCCceEEEeeCCCeEEEEECCCcc-eeeeee---------eccccEEEEEEec-CCCEEEEEe-CCCeEEEEEccCC
Q 019326 95 QNLSVPRNLFSTSADGFVSIFDADPFV-LLTSVK---------VHKKGVNDLAVHH-SGKLALTVG-RDDCLAMVNLVRG 162 (343)
Q Consensus 95 ~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~---------~~~~~v~~i~~~~-~~~~l~~~~-~d~~i~~wd~~~~ 162 (343)
+ +++++...++.|++||..... .+..+. .+......++++| ++.++++.+ .++.|++|| .++
T Consensus 102 g-----~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g 175 (329)
T 3fvz_A 102 G-----NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG 175 (329)
T ss_dssp S-----CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS
T ss_pred C-----CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC
Confidence 8 788888889999999986542 444442 2334689999999 788888876 689999999 456
Q ss_pred ceeEEEEcC-----------CcceEEEEeCC-CCEEEEE-eCCcEEEEEcccceeEEEec---CCcceEEeeecCCCeEE
Q 019326 163 RRSFYHKIG-----------KEASLIKFDGS-GEKFFMV-TEEKVGIHQAEDAKLLCELD---GKKRILCAAPGENGVLF 226 (343)
Q Consensus 163 ~~~~~~~~~-----------~~~~~~~~~~~-~~~~~~~-~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~ 226 (343)
+.+...... ..+..++++|+ +..+++. .++.|++|+..+++.+..+. +...+..++++++..+.
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~ 255 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFA 255 (329)
T ss_dssp CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEE
T ss_pred CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEE
Confidence 655544321 23788999999 5555555 78899999999888888875 34567778877733333
Q ss_pred EE-------eCCCcEEEEECCCCceeEEec--ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 227 TG-------GEDRSITAWDTNSGKVAYCIE--DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 227 ~~-------~~dg~i~i~d~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
+. ..+..|++||..+++.+..+. .++...+.+|++++++. ++++...+++|++|++..
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~---------lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT---------VYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE---------EEEEESSSCCEEEEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC---------EEEEECCCCEEEEEeCCc
Confidence 32 234589999999999988873 25677899999988875 889999999999999875
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.85 E-value=6.1e-19 Score=148.76 Aligned_cols=275 Identities=13% Similarity=0.069 Sum_probs=189.6
Q ss_pred cCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEee----------CCCeEEEEEcCCCeee
Q 019326 8 YEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGG----------TDDTIHLYDLSTSSSL 75 (343)
Q Consensus 8 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~----------~dg~i~iwd~~~~~~~ 75 (343)
.|+.|++||..+ + +.+..+..+..+ .++|+ +++++++. .++.|.+||..+++.+
T Consensus 29 ~d~~v~v~D~~t-------~-----~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~ 94 (361)
T 2oiz_A 29 TESRVHVYDYTN-------G-----KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFE 94 (361)
T ss_dssp GGCEEEEEETTT-------C-----CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEE
T ss_pred ccCeEEEEECCC-------C-----eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEE
Confidence 478999999776 2 223445555555 88998 78888876 3678999999999888
Q ss_pred eEeccCC-----CCCeEEEEEeCCCCCCCCceEEEeeC--CCeEEEEECCCcceeee-eeeccccEEEEEEecCC-CEEE
Q 019326 76 GAIHHHE-----SSSVTSLAFYTPQNLSVPRNLFSTSA--DGFVSIFDADPFVLLTS-VKVHKKGVNDLAVHHSG-KLAL 146 (343)
Q Consensus 76 ~~~~~~~-----~~~v~~l~~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~~~~-~~l~ 146 (343)
..+.... ......++++|++ ++|+++.. +++|.+||+.+++.+.. +.. . ....+.+.|++ ..++
T Consensus 95 ~~i~~~~~~~~~g~~p~~i~~spdg-----~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 95 KEISLPPKRVQGLNYDGLFRQTTDG-----KFIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFM 167 (361)
T ss_dssp EEEEECTTBCCBCCCGGGEEECTTS-----SEEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEE
T ss_pred EEEEcCccccccCCCcceEEECCCC-----CEEEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEE
Confidence 8775320 2456789999999 78888764 58999999999888776 542 2 22335677765 6788
Q ss_pred EEeCCCeEEEEEccC-CceeEEEE------cCCcceEEEEeCCCCEEEEE-eCCcEEEEEccccee--EEEecC------
Q 019326 147 TVGRDDCLAMVNLVR-GRRSFYHK------IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKL--LCELDG------ 210 (343)
Q Consensus 147 ~~~~d~~i~~wd~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~--~~~~~~------ 210 (343)
+.+.||.+.+|++.. ++...... .......+.+++++..++.. .++.+.++|+..... ...+..
T Consensus 168 ~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 247 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK 247 (361)
T ss_dssp EEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH
T ss_pred EECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc
Confidence 889999999999875 44331211 11112223345666666655 778899999865432 222110
Q ss_pred -----CcceEEeeec-CCCeEEEEeC-----------CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCC
Q 019326 211 -----KKRILCAAPG-ENGVLFTGGE-----------DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAEN 273 (343)
Q Consensus 211 -----~~~i~~~~~~-~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 273 (343)
......++++ +++.++++.. .+.|.+||+.+++.+.++. .+. +.+++|+|+++
T Consensus 248 ~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~-~~~--p~~ia~spdg~------- 317 (361)
T 2oiz_A 248 AKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP-GRD--ALSMTIDQQRN------- 317 (361)
T ss_dssp HTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE-CTT--CCEEEEETTTT-------
T ss_pred ccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe-cCC--eeEEEECCCCC-------
Confidence 0111124566 4465555432 3589999999999999998 555 89999999987
Q ss_pred CeEEEEEcCCCcEEEEeccCc--cccCCCccccc-ccccceeEEEcCCCCc
Q 019326 274 PYLVASASSDGVICVWDVRMA--IKEKPLPLAEA-KTNSRLTCLAGSSTKS 321 (343)
Q Consensus 274 ~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~-~~~~~i~~~~~s~~~~ 321 (343)
+|++++. +.|.+||..++ + .+..+ ..+.....++++|+|.
T Consensus 318 --~l~v~n~-~~v~v~D~~t~~l~-----~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 318 --LMLTLDG-GNVNVYDISQPEPK-----LLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp --EEEEECS-SCEEEEECSSSSCE-----EEEEETTSCSSEEEEEECCCSC
T ss_pred --EEEEeCC-CeEEEEECCCCcce-----eeEEeccCCCCcEEEEecCCCC
Confidence 8888886 99999999987 4 33332 4455678899999875
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=6.4e-17 Score=132.15 Aligned_cols=233 Identities=10% Similarity=0.144 Sum_probs=170.7
Q ss_pred CCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEecc------CCCCCeEEEEEe-CCCCCCCCceEEEeeC-C
Q 019326 40 AHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHH------HESSSVTSLAFY-TPQNLSVPRNLFSTSA-D 109 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~l~~~-~~~~~~~~~~l~s~~~-d 109 (343)
+|...+.+++++ ++++++...++.|.+||.+ ++.+..+.. + ...+..+++. +++ .++++... +
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~-~~~p~~i~~~~~~g-----~l~v~~~~~~ 99 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQ-LLYPNRVAVVRNSG-----DIIVTERSPT 99 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTC-BSSEEEEEEETTTT-----EEEEEECGGG
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCccc-ccCceEEEEEcCCC-----eEEEEcCCCC
Confidence 456779999998 6777777888999999987 666666542 2 3578899995 565 45555433 8
Q ss_pred CeEEEEECCCcceeeeeee-ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc---CCcceEEEEeCCCCE
Q 019326 110 GFVSIFDADPFVLLTSVKV-HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI---GKEASLIKFDGSGEK 185 (343)
Q Consensus 110 g~i~iwd~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 185 (343)
+.|.+|| .+++.+..+.. +...+..++++|+++++++...++.|.+||.. ++....... ...+..++++++++.
T Consensus 100 ~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 100 HQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEI 177 (286)
T ss_dssp CEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEE
T ss_pred CEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCE
Confidence 8999999 55566666542 33578999999999988887888999999964 454444432 245788999999987
Q ss_pred EEEE-eCCcEEEEEcccceeEEEecCC---cceEEeeecC-CCeEEEEeCCC-cEEEEECCCCceeEEeccccc--ccEE
Q 019326 186 FFMV-TEEKVGIHQAEDAKLLCELDGK---KRILCAAPGE-NGVLFTGGEDR-SITAWDTNSGKVAYCIEDAHS--ARVK 257 (343)
Q Consensus 186 ~~~~-~~~~i~~~d~~~~~~~~~~~~~---~~i~~~~~~~-~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~h~--~~v~ 257 (343)
+++. .++.|.+|+. +++.+..+... ..+..+++++ ++++++...++ .|.+||. +++.+..+. .+. ..+.
T Consensus 178 ~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~-~~~~~~~~~ 254 (286)
T 1q7f_A 178 FISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALE-SKVKHAQCF 254 (286)
T ss_dssp EEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEE-ESSCCSCEE
T ss_pred EEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEc-ccCCCCcce
Confidence 7776 6899999997 45566666532 5678899974 55666666665 9999995 477777776 333 3478
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 258 GIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
++++++++. ++++ +.|++|++|++...
T Consensus 255 ~i~~~~~g~---------l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 255 DVALMDDGS---------VVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEETTTE---------EEEE-ETTTEEEEEECSCC
T ss_pred eEEECCCCc---------EEEE-CCCCeEEEEEcccc
Confidence 999998875 6666 57999999998653
No 165
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.82 E-value=2.6e-17 Score=137.08 Aligned_cols=263 Identities=9% Similarity=0.041 Sum_probs=187.0
Q ss_pred ccCCeEEEEEeecCCCCCCCCcceeeEEe-EEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCC
Q 019326 7 SYEKFIWGYKLKPSNHYSSDQKTLTLTQL-FSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESS 84 (343)
Q Consensus 7 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 84 (343)
+.++.|.+||..+ ++....... ..-.........+++. +..+++...++.|.+||..+++.+..+.. ..
T Consensus 14 ~~~~~l~~~d~~t-------~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~--~~ 84 (328)
T 3dsm_A 14 YSNATLSYYDPAT-------CEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG--FT 84 (328)
T ss_dssp SCCBEEEEEETTT-------TEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEEC--CS
T ss_pred CCCceEEEEECCC-------CEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCC--CC
Confidence 3478999999876 211100000 0000122346778888 45555556679999999999999888854 36
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecc-----ccEEEEEEecCCCEEEEEe-CCCeEEEEE
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHK-----KGVNDLAVHHSGKLALTVG-RDDCLAMVN 158 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~i~~~~~~~~l~~~~-~d~~i~~wd 158 (343)
....+++++++ +.+++...++.|.+||..+++....+.... .....+++ .+++.+++.. .++.|.++|
T Consensus 85 ~p~~i~~~~~g-----~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 85 SPRYIHFLSDE-----KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKID 158 (328)
T ss_dssp SEEEEEEEETT-----EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEE
T ss_pred CCcEEEEeCCC-----eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEE
Confidence 78999998887 455554489999999999988877776433 14456777 3444444433 489999999
Q ss_pred ccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eC----------CcEEEEEcccceeEEEecC--CcceEEeeecC-CCe
Q 019326 159 LVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TE----------EKVGIHQAEDAKLLCELDG--KKRILCAAPGE-NGV 224 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~i~~~d~~~~~~~~~~~~--~~~i~~~~~~~-~~~ 224 (343)
+.+++..........+..+.++|++++++++ .+ +.|.++|..+++....+.. ......+++++ ++.
T Consensus 159 ~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ 238 (328)
T 3dsm_A 159 TETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDT 238 (328)
T ss_dssp TTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCE
T ss_pred CCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCE
Confidence 9999888877777778889999999977777 44 7899999999988877763 34688999984 677
Q ss_pred EEEEeCCCcEEEEECCCCceeE-EecccccccEEEEEEEecCCCCCCCCCCeEEEEE----cCCCcEEEEeccCcc
Q 019326 225 LFTGGEDRSITAWDTNSGKVAY-CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASA----SSDGVICVWDVRMAI 295 (343)
Q Consensus 225 l~~~~~dg~i~i~d~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~----~~dg~i~vwd~~~~~ 295 (343)
++++.. .|.+||..+++... .+...+.....+++++|++. +++++. ..++.|.+||.. ++
T Consensus 239 lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g--------~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 239 LYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNG--------EVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp EEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTC--------CEEEEECTTSSSEEEEEEECTT-CC
T ss_pred EEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCC--------eEEEEcccccccCCEEEEECCC-CC
Confidence 777654 89999998887532 11102246788999998443 166666 678999999998 54
No 166
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=2.4e-16 Score=131.68 Aligned_cols=225 Identities=10% Similarity=0.019 Sum_probs=158.0
Q ss_pred EeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC--
Q 019326 34 QLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD-- 109 (343)
Q Consensus 34 ~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d-- 109 (343)
....+..+...+.+++|+ +++++++..++.|.+||.++++.......+ ...+.++++++++ +++++...+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg-----~l~v~~~~~~~ 109 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSH-KANPAAIKIHKDG-----RLFVCYLGDFK 109 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECS-SSSEEEEEECTTS-----CEEEEECTTSS
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCC-----cEEEEeCCCCC
Confidence 344555677788999998 666677888999999999988766544445 5789999999998 666666655
Q ss_pred --CeEEEEECCCcceeeeee--eccccEEEEEEecCCCEEEEEeC------CCeEEEEEccCCceeEEEEcCCcceEEEE
Q 019326 110 --GFVSIFDADPFVLLTSVK--VHKKGVNDLAVHHSGKLALTVGR------DDCLAMVNLVRGRRSFYHKIGKEASLIKF 179 (343)
Q Consensus 110 --g~i~iwd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 179 (343)
+.|.+||.++++....+. .+...+.+++++|+++++++... .+.|..+|..+++..........+..+++
T Consensus 110 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 189 (333)
T 2dg1_A 110 STGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIAL 189 (333)
T ss_dssp SCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEE
T ss_pred CCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEE
Confidence 689999998766543332 23457899999999987776654 35677777665554433333345788999
Q ss_pred eCCCCEEEEE--eCCcEEEEEccc-ceeEEE--------ecCCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEE
Q 019326 180 DGSGEKFFMV--TEEKVGIHQAED-AKLLCE--------LDGKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYC 247 (343)
Q Consensus 180 ~~~~~~~~~~--~~~~i~~~d~~~-~~~~~~--------~~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~ 247 (343)
+|+++.++++ .++.|.+|+..+ +..... +.....+..+++++ ++++++...++.|.+||. +++.+..
T Consensus 190 ~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~ 268 (333)
T 2dg1_A 190 STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQ 268 (333)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEE
T ss_pred CCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEE
Confidence 9999876655 578999999863 332211 11223577788874 455555556789999998 4777766
Q ss_pred ecccccc------cEEEEEEEecCC
Q 019326 248 IEDAHSA------RVKGIVVLTKND 266 (343)
Q Consensus 248 ~~~~h~~------~v~~~~~~~~~~ 266 (343)
+. .+.. .+.+++|++++.
T Consensus 269 ~~-~~~~~~g~~~~~~~~~~~~dg~ 292 (333)
T 2dg1_A 269 IL-IPGRDEGHMLRSTHPQFIPGTN 292 (333)
T ss_dssp EE-CTTGGGTCSCBCCEEEECTTSC
T ss_pred EE-cCCCccccccCcceEEECCCCC
Confidence 65 3332 688999987754
No 167
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=1.8e-19 Score=166.17 Aligned_cols=230 Identities=10% Similarity=0.028 Sum_probs=161.5
Q ss_pred EEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCC---CeEEEEEeCCCCCCCCceEEEeeC---------CCeE
Q 019326 47 TVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESS---SVTSLAFYTPQNLSVPRNLFSTSA---------DGFV 112 (343)
Q Consensus 47 ~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~v~~l~~~~~~~~~~~~~l~s~~~---------dg~i 112 (343)
+++|+ +. ++..+.|+.|++||+.+++....+..+ .. .+.+++|+|++ ++|++++. ++.|
T Consensus 20 ~~~~s~dg~-~~~~~~d~~i~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~SpDg-----~~la~~~~~~~~~~~s~~~~i 92 (719)
T 1z68_A 20 FPNWISGQE-YLHQSADNNIVLYNIETGQSYTILSNR-TMKSVNASNYGLSPDR-----QFVYLESDYSKLWRYSYTATY 92 (719)
T ss_dssp CCEESSSSE-EEEECTTSCEEEEESSSCCEEEEECHH-HHHTTTCSEEEECTTS-----SEEEEEEEEEECSSSCEEEEE
T ss_pred ccEECCCCe-EEEEcCCCCEEEEEcCCCcEEEEEccc-cccccceeeEEECCCC-----CeEEEEecCceeEEeecceEE
Confidence 66787 54 444556999999999999887777655 33 48999999999 78888876 7899
Q ss_pred EEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC--C-----------------c
Q 019326 113 SIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG--K-----------------E 173 (343)
Q Consensus 113 ~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--~-----------------~ 173 (343)
++||+.+++.+.... ....+..++|+|||+.|+.+. ++.|++||+.+++........ . .
T Consensus 93 ~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~ 170 (719)
T 1z68_A 93 YIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLAT 170 (719)
T ss_dssp EEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCS
T ss_pred EEEECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccC
Confidence 999999887631111 124688899999999999886 789999999887754322111 1 1
Q ss_pred ceEEEEeCCCCEEEEE-eCC----------------------------------cEEEEEcccceeE--EEe-------c
Q 019326 174 ASLIKFDGSGEKFFMV-TEE----------------------------------KVGIHQAEDAKLL--CEL-------D 209 (343)
Q Consensus 174 ~~~~~~~~~~~~~~~~-~~~----------------------------------~i~~~d~~~~~~~--~~~-------~ 209 (343)
...++|+|+|+.|+.+ .+. .+.+||+.+++.. ..+ .
T Consensus 171 ~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 250 (719)
T 1z68_A 171 KYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIAS 250 (719)
T ss_dssp SCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHT
T ss_pred cccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCC
Confidence 1479999999999988 432 6889999887642 121 2
Q ss_pred CCcceEEeeecCCC-eEEEEeCC----CcEEEEE----CCCCceeEEec---ccccccEE-----EEEEEecCCCCCCCC
Q 019326 210 GKKRILCAAPGENG-VLFTGGED----RSITAWD----TNSGKVAYCIE---DAHSARVK-----GIVVLTKNDGGSTAE 272 (343)
Q Consensus 210 ~~~~i~~~~~~~~~-~l~~~~~d----g~i~i~d----~~~~~~~~~~~---~~h~~~v~-----~~~~~~~~~~~~~~~ 272 (343)
+...+..++|++++ ++++.... ..|.+|| ..+++....+. ..|...+. .+.|+|++.
T Consensus 251 ~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~------ 324 (719)
T 1z68_A 251 SDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAI------ 324 (719)
T ss_dssp SCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSS------
T ss_pred CcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCC------
Confidence 56678999999655 44443322 2488899 77766543331 25666666 788988876
Q ss_pred CCeEEE--EEcCCC--cEEEEeccCc
Q 019326 273 NPYLVA--SASSDG--VICVWDVRMA 294 (343)
Q Consensus 273 ~~~~l~--s~~~dg--~i~vwd~~~~ 294 (343)
.|+ ++..+| .|.+||+.++
T Consensus 325 ---~l~~~~~~~~g~~~l~~~~~~~~ 347 (719)
T 1z68_A 325 ---SYYKIFSDKDGYKHIHYIKDTVE 347 (719)
T ss_dssp ---CEEEEEECTTSCEEEEEESSCST
T ss_pred ---eEEEEEEccCCceEEEEEECCCC
Confidence 443 455666 4666676654
No 168
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.81 E-value=1.1e-16 Score=129.57 Aligned_cols=203 Identities=12% Similarity=0.079 Sum_probs=163.8
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCC-CCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecc
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHES-SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHK 130 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 130 (343)
++.|++++.++.|.+||.++++.+..+..+ . ..+.++.+.|++ ++++ +.++.|..||. +++.+..+..+.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~-~~~~~~~~~~~pdG-----~ilv--s~~~~V~~~d~-~G~~~W~~~~~~ 75 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLE-KGWECNSVAATKAG-----EILF--SYSKGAKMITR-DGRELWNIAAPA 75 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECC-TTCCCCEEEECTTS-----CEEE--ECBSEEEEECT-TSCEEEEEECCT
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCC-ccCCCcCeEECCCC-----CEEE--eCCCCEEEECC-CCCEEEEEcCCC
Confidence 678999999999999999999999999877 4 578999999999 6777 45778999999 789999988753
Q ss_pred -ccEEEEEEecCCCEEEEEeC-CCeEEEEEccCCceeEEEEcCC-------cceEEEEeCCCCEEEEE-eCCcEEEEEcc
Q 019326 131 -KGVNDLAVHHSGKLALTVGR-DDCLAMVNLVRGRRSFYHKIGK-------EASLIKFDGSGEKFFMV-TEEKVGIHQAE 200 (343)
Q Consensus 131 -~~v~~i~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~i~~~d~~ 200 (343)
..+.++.+.++|+++++.+. ++.+..+|. +++.+....... ....++..++++++++. .++.|..||..
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 47889999999999999887 788888885 677666655432 23456789999999988 89999999998
Q ss_pred cceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEeccccc------ccEEEEEEEecCC
Q 019326 201 DAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHS------ARVKGIVVLTKND 266 (343)
Q Consensus 201 ~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~------~~v~~~~~~~~~~ 266 (343)
++.+.++.......++... ++++++++..++.|..+|..+|+.+.++. .+. ..+.+++..+++.
T Consensus 155 -G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~-~~~~~~~~l~~~~~~~~~~~G~ 225 (276)
T 3no2_A 155 -GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN-ANDIEGVQLFFVAQLFPLQNGG 225 (276)
T ss_dssp -SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE-GGGSBSCCCSEEEEEEECTTSC
T ss_pred -CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec-CCCCCCccccccccceEcCCCC
Confidence 9999998865555555555 56788888888899999999999999986 332 2367777777665
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.80 E-value=2.9e-17 Score=139.05 Aligned_cols=261 Identities=10% Similarity=0.037 Sum_probs=170.0
Q ss_pred eEEEeeCC--CeEEEEEc--CCCeeee--Eec-cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC-Ccceeee
Q 019326 54 AAASGGTD--DTIHLYDL--STSSSLG--AIH-HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD-PFVLLTS 125 (343)
Q Consensus 54 ~l~s~~~d--g~i~iwd~--~~~~~~~--~~~-~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~ 125 (343)
.+++|+.. +.|.+|++ .+++... ... .. ...+..++|+|++ ++|++++.+ .|.+|++. +++....
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~-~~~~~~~a~spdg-----~~l~~~~~~-~v~~~~~~~~g~~~~~ 76 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQ-DEPISWMTFDHER-----KNIYGAAMK-KWSSFAVKSPTEIVHE 76 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCT-TCCCSEEEECTTS-----SEEEEEEBT-EEEEEEEEETTEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCC-CCCCcEEEECCCC-----CEEEEEccc-eEEEEEECCCCCEEEe
Confidence 35555543 56887765 4555422 221 22 3568899999999 788888888 99999997 6665443
Q ss_pred eeec-cccEEEEEEecCCCE--EEEEe-------------CCCeEEEEEcc-CCceeEEEE-----cCCcceEEEEeCCC
Q 019326 126 VKVH-KKGVNDLAVHHSGKL--ALTVG-------------RDDCLAMVNLV-RGRRSFYHK-----IGKEASLIKFDGSG 183 (343)
Q Consensus 126 ~~~~-~~~v~~i~~~~~~~~--l~~~~-------------~d~~i~~wd~~-~~~~~~~~~-----~~~~~~~~~~~~~~ 183 (343)
.... .+.+..++|+|++++ ++++. .++.+.+|++. .++...... ....+..++|+|++
T Consensus 77 ~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG 156 (365)
T 1jof_A 77 ASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE 156 (365)
T ss_dssp EEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS
T ss_pred eEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC
Confidence 3211 123556899999984 44553 68999999997 455433222 34568899999999
Q ss_pred CEEEEE--eCCcEEEEEcc-cceeE--EEec---CCcceEEeeecC-CCeEEEEeC-CCcEEEEECC--CCcee---EEe
Q 019326 184 EKFFMV--TEEKVGIHQAE-DAKLL--CELD---GKKRILCAAPGE-NGVLFTGGE-DRSITAWDTN--SGKVA---YCI 248 (343)
Q Consensus 184 ~~~~~~--~~~~i~~~d~~-~~~~~--~~~~---~~~~i~~~~~~~-~~~l~~~~~-dg~i~i~d~~--~~~~~---~~~ 248 (343)
++++++ .++.|.+|++. +++.. ..+. +...+..++|++ ++++++++. ++.|.+|++. +++.. ..+
T Consensus 157 ~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~ 236 (365)
T 1jof_A 157 TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSF 236 (365)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceE
Confidence 988877 46799999998 66543 3333 256688999995 557776664 7899999765 46542 122
Q ss_pred c---c---cccc------cEEEEE-EEecCCCCCCCCCCeEEEEEcCC-C-----cEEEEecc-CccccCCCcccc-cc-
Q 019326 249 E---D---AHSA------RVKGIV-VLTKNDGGSTAENPYLVASASSD-G-----VICVWDVR-MAIKEKPLPLAE-AK- 306 (343)
Q Consensus 249 ~---~---~h~~------~v~~~~-~~~~~~~~~~~~~~~~l~s~~~d-g-----~i~vwd~~-~~~~~~~~~~~~-~~- 306 (343)
. . +|.. .+..++ |+|+++ +|++++.+ + .|.+|++. ++.. ..+.. ..
T Consensus 237 ~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~---------~l~v~~~~~~~~~~~~i~v~~~~~~g~~---~~~~~~~~~ 304 (365)
T 1jof_A 237 PLIPPGIPDRDPETGKGLYRADVCALTFSGK---------YMFASSRANKFELQGYIAGFKLRDCGSI---EKQLFLSPT 304 (365)
T ss_dssp ESSCTTCCCBCTTTSSBSEEEEEEEECTTSS---------EEEEEEEESSTTSCCEEEEEEECTTSCE---EEEEEEEEC
T ss_pred EcCCCCcCCcccccccccccccEEEECCCCC---------EEEEECCCCCCCCCCeEEEEEECCCCCE---EEeeeeeec
Confidence 2 0 1222 588999 998887 77766543 2 89999996 3321 11110 11
Q ss_pred cccceeEEEcCC---CCceeccccCC-CCCC
Q 019326 307 TNSRLTCLAGSS---TKSFKRPQIGD-SAPK 333 (343)
Q Consensus 307 ~~~~i~~~~~s~---~~~~~~~~~~~-~~~~ 333 (343)
....+..++++| ++++++....+ +.+.
T Consensus 305 ~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~ 335 (365)
T 1jof_A 305 PTSGGHSNAVSPCPWSDEWMAITDDQEGWLE 335 (365)
T ss_dssp SSCCTTCCCEEECTTCTTEEEEECSSSCEEE
T ss_pred CCCCcccceecCCCcCCCEEEEEEcCCCeEE
Confidence 223466788899 78887776554 4433
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.80 E-value=2.6e-18 Score=158.69 Aligned_cols=257 Identities=9% Similarity=-0.053 Sum_probs=172.4
Q ss_pred CCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCC-----CeEEEEEeCCCCCCCCceEEEeeCC------
Q 019326 43 SPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESS-----SVTSLAFYTPQNLSVPRNLFSTSAD------ 109 (343)
Q Consensus 43 ~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~v~~l~~~~~~~~~~~~~l~s~~~d------ 109 (343)
....+++|+ +.+++++ |+.|++||+.+++....+..| .. ....+.|+|++ ++|+.++.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Spdg-----~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENS-TFDEFGHSINDYSISPDG-----QFILLEYNYVKQWRH 88 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTT-TTTTCCSCCCEEEECTTS-----SEEEEEEEEEECSSS
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEech-hhhhhcccccceEECCCC-----CEEEEEECCeeeEEE
Confidence 346678998 6677775 899999999999988777766 32 22448899999 788888876
Q ss_pred ---CeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCC--------------
Q 019326 110 ---GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGK-------------- 172 (343)
Q Consensus 110 ---g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------------- 172 (343)
+.+.+||+.+++.. .+..|...+...+|+|||+.|+.+. ++.|++||+.+++.........
T Consensus 89 ~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE 166 (740)
T ss_dssp CEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHH
T ss_pred ccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCccccccc
Confidence 56779999998754 4566778899999999999998884 6899999998877443221111
Q ss_pred -----cceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCC---
Q 019326 173 -----EASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNS--- 241 (343)
Q Consensus 173 -----~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~--- 241 (343)
....+.|+|+|+.|+.. .+..+.+|++....... .+...+..+.+. .+.. .....|++||+.+
T Consensus 167 ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~--~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~ 240 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES--LQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSS 240 (740)
T ss_dssp HHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT--CSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCS
T ss_pred chhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC--CCCCcceeecCCCCcCc----CCeeEEEEEECCCCCC
Confidence 11348999999999888 55668888764321110 122334445443 2211 1223689999998
Q ss_pred Cc--eeEEecc-----cccccEEEEEEEecCCCCCCCCCCeEEEEEc----CCCcEEEEeccCcc----ccCCCcccccc
Q 019326 242 GK--VAYCIED-----AHSARVKGIVVLTKNDGGSTAENPYLVASAS----SDGVICVWDVRMAI----KEKPLPLAEAK 306 (343)
Q Consensus 242 ~~--~~~~~~~-----~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~----~dg~i~vwd~~~~~----~~~~~~~~~~~ 306 (343)
++ ....+.. +|...+..++|+|++. .++... .+..|++||+.++. +.....+....
T Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~---------~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~ 311 (740)
T 4a5s_A 241 VTNATSIQITAPASMLIGDHYLCDVTWATQER---------ISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMS 311 (740)
T ss_dssp SSCCCEEEECCCHHHHTSCEEEEEEEEEETTE---------EEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEEC
T ss_pred CCcceEEEecCCccCCCCCeEEEEEEEeCCCe---------EEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeecc
Confidence 73 2334441 2778899999999986 566543 33479999999875 22112221111
Q ss_pred cccc-----eeEEEcCCCCceec
Q 019326 307 TNSR-----LTCLAGSSTKSFKR 324 (343)
Q Consensus 307 ~~~~-----i~~~~~s~~~~~~~ 324 (343)
.... ....+|+||++.++
T Consensus 312 ~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 312 TTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp SSSCSSSSSCCCCEECTTSSEEE
T ss_pred CCceEccCcCCCceEcCCCCEEE
Confidence 2222 23678999998665
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=3e-17 Score=140.05 Aligned_cols=261 Identities=7% Similarity=-0.079 Sum_probs=170.7
Q ss_pred eEEecc-CC--eEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeE
Q 019326 3 LIAGSY-EK--FIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGA 77 (343)
Q Consensus 3 l~~g~~-d~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~ 77 (343)
|+.++. ++ .|++||+.. ........+|...+..++|+ ++.|+.++.++.|++||+.+++....
T Consensus 50 l~~~~~~~g~~~l~~~d~~~------------g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 50 LLFGGAFDGPWNYYLLDLNT------------QVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVV 117 (388)
T ss_dssp EEEEECTTSSCEEEEEETTT------------CEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred EEEEEcCCCCceEEEEeCCC------------CceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceee
Confidence 555555 56 377777765 12223334565555567788 88999999999999999999987776
Q ss_pred eccCCCCCeEEEE--EeCCCCCCCCceEEEe----------------------eCCCeEEEEECCCcceeeeeeeccccE
Q 019326 78 IHHHESSSVTSLA--FYTPQNLSVPRNLFST----------------------SADGFVSIFDADPFVLLTSVKVHKKGV 133 (343)
Q Consensus 78 ~~~~~~~~v~~l~--~~~~~~~~~~~~l~s~----------------------~~dg~i~iwd~~~~~~~~~~~~~~~~v 133 (343)
+..+ ...+.... +++++ ++++.. ..+..|.+||+.+++.. .+..+...+
T Consensus 118 ~~~~-~~~~~~~~~~~~~dg-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~ 190 (388)
T 3pe7_A 118 YQVP-AEWVGYGTWVANSDC-----TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWL 190 (388)
T ss_dssp EECC-TTEEEEEEEEECTTS-----SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCE
T ss_pred eech-hhcccccceeECCCC-----CeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccc
Confidence 6655 55554444 47887 566532 24578999999987644 444567788
Q ss_pred EEEEEec-CCCEEEEEeCC------CeEEEEEccCCceeEEEEcC--CcceEEEEeCCCCEEEEE--eCC----cEEEEE
Q 019326 134 NDLAVHH-SGKLALTVGRD------DCLAMVNLVRGRRSFYHKIG--KEASLIKFDGSGEKFFMV--TEE----KVGIHQ 198 (343)
Q Consensus 134 ~~i~~~~-~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~----~i~~~d 198 (343)
..++|+| +++.|+.+..+ ..|.++|+..+......... ..+....|+|+|+.++.. .++ .|.+||
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (388)
T 3pe7_A 191 GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSAD 270 (388)
T ss_dssp EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEEC
T ss_pred cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEe
Confidence 9999999 99988877753 37888887765543332222 246678999999977655 322 399999
Q ss_pred cccceeEEEecCCc--c----eEEeeec-CCCeEEEE---------eCCCcEEEEECCCCceeEEecccccc--------
Q 019326 199 AEDAKLLCELDGKK--R----ILCAAPG-ENGVLFTG---------GEDRSITAWDTNSGKVAYCIEDAHSA-------- 254 (343)
Q Consensus 199 ~~~~~~~~~~~~~~--~----i~~~~~~-~~~~l~~~---------~~dg~i~i~d~~~~~~~~~~~~~h~~-------- 254 (343)
+.+++......... . .....|+ +++.|+.. ..+..|++||+.+++. ..+. .|..
T Consensus 271 ~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~-~~~~~~~~~~~~ 348 (388)
T 3pe7_A 271 PETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVA-RHDTSWKVFEGD 348 (388)
T ss_dssp TTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEE-ECCCCCCCBTTB
T ss_pred cCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEec-cccCcccccccc
Confidence 99887533222111 1 1112355 34444432 4567899999998764 4454 4544
Q ss_pred ---cEEEEEEEecCCCCCCCCCCeEEEEE-cCCCcEEEEeccC
Q 019326 255 ---RVKGIVVLTKNDGGSTAENPYLVASA-SSDGVICVWDVRM 293 (343)
Q Consensus 255 ---~v~~~~~~~~~~~~~~~~~~~~l~s~-~~dg~i~vwd~~~ 293 (343)
.+..++|+|++. .|+.. ..+|...||.++-
T Consensus 349 ~~~~~~~~~~spDg~---------~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 349 RQVTHPHPSFTPDDK---------QILFTSDVHGKPALYLATL 382 (388)
T ss_dssp SSTTCCCCEECTTSS---------EEEEEECTTSSCEEEEEEC
T ss_pred cccCCCCccCCCCCC---------EEEEEecCCCceeEEEEEC
Confidence 577888988876 66654 4578778876653
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.79 E-value=1.7e-17 Score=141.93 Aligned_cols=262 Identities=8% Similarity=-0.039 Sum_probs=173.0
Q ss_pred eEEEEec--CceEEEeeCC---CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC
Q 019326 45 ITTVAVS--GTAAASGGTD---DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP 119 (343)
Q Consensus 45 v~~l~~~--~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 119 (343)
+.+++|+ |++|+..... ..|.+||+.+++.......+ ......+.|+|++ +.|+.++.++.|++||+.+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~-~~~~~~~~~spdg-----~~l~~~~~~~~l~~~d~~~ 111 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGK-GDNTFGGFISTDE-----RAFFYVKNELNLMKVDLET 111 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSS-CBCTTTCEECTTS-----SEEEEEETTTEEEEEETTT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCC-CCccccceECCCC-----CEEEEEEcCCcEEEEECCC
Confidence 6777888 7777766443 47888999988765444333 3223347899999 7899999999999999988
Q ss_pred cceeeeeeeccccEEE-------------------EEEecCCCEEEEE-----eCCCeEEEEEccCCceeEEEEcCCcce
Q 019326 120 FVLLTSVKVHKKGVND-------------------LAVHHSGKLALTV-----GRDDCLAMVNLVRGRRSFYHKIGKEAS 175 (343)
Q Consensus 120 ~~~~~~~~~~~~~v~~-------------------i~~~~~~~~l~~~-----~~d~~i~~wd~~~~~~~~~~~~~~~~~ 175 (343)
++.......+...... +.|+|+++.++.. ..+..|.+||+.+++..........+.
T Consensus 112 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~ 191 (396)
T 3c5m_A 112 LEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLG 191 (396)
T ss_dssp CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEE
T ss_pred CCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccc
Confidence 8766555544432222 3457777666544 356789999999988766666667788
Q ss_pred EEEEeC-CCCEEEEE-eC------CcEEEEEcccceeEEEecC--CcceEEeeecC-CCeEEEEeCC-----CcEEEEEC
Q 019326 176 LIKFDG-SGEKFFMV-TE------EKVGIHQAEDAKLLCELDG--KKRILCAAPGE-NGVLFTGGED-----RSITAWDT 239 (343)
Q Consensus 176 ~~~~~~-~~~~~~~~-~~------~~i~~~d~~~~~~~~~~~~--~~~i~~~~~~~-~~~l~~~~~d-----g~i~i~d~ 239 (343)
.+.|+| ++..++.. .+ ..|.+|++..++......+ ...+..+.|++ ++.|+.++.+ +.|++||+
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (396)
T 3c5m_A 192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANP 271 (396)
T ss_dssp EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECT
T ss_pred cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEEC
Confidence 999999 78877666 32 4688888876554333332 33577889984 5666655443 44999999
Q ss_pred CCCceeEEecccccccEEEEEEEe-cCCCCCCCCCCeEEEEEc----------------CCCcEEEEeccCccccCCCcc
Q 019326 240 NSGKVAYCIEDAHSARVKGIVVLT-KNDGGSTAENPYLVASAS----------------SDGVICVWDVRMAIKEKPLPL 302 (343)
Q Consensus 240 ~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~~~~l~s~~----------------~dg~i~vwd~~~~~~~~~~~~ 302 (343)
.+++...... .. ... +.|++ ++. ++++++ .++.|++||+.++.. ..+
T Consensus 272 ~~g~~~~l~~--~~-~~~-~~~s~~dg~---------~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~l 335 (396)
T 3c5m_A 272 ETLENEEVMV--MP-PCS-HLMSNFDGS---------LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA---QKL 335 (396)
T ss_dssp TTCCEEEEEE--CC-SEE-EEEECSSSS---------EEEEEECCC----------CCCCCCEEEEEETTTTBC---CEE
T ss_pred CCCCeEEeee--CC-CCC-CCccCCCCc---------eEEEecCCcceeeccccccccCCCCcEEEEecccCce---EEc
Confidence 8886543322 11 123 78888 776 777654 347899999987642 122
Q ss_pred ccccc---------ccceeEEEcCCCCceeccccC
Q 019326 303 AEAKT---------NSRLTCLAGSSTKSFKRPQIG 328 (343)
Q Consensus 303 ~~~~~---------~~~i~~~~~s~~~~~~~~~~~ 328 (343)
..... ...+...+|+++++.++....
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 336 CKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred cCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 11111 002456788999987765544
No 173
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.79 E-value=4.1e-15 Score=131.73 Aligned_cols=293 Identities=14% Similarity=0.061 Sum_probs=205.1
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcC--CCeeeeEe
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLS--TSSSLGAI 78 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~--~~~~~~~~ 78 (343)
+++...++.|.++|..+ .+.+..+.. ...+..++|+ ++++++++.|+.|.+||+. +++.+..+
T Consensus 170 ~V~~~~~~~V~viD~~t------------~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 170 SVTLRDAGQIALIDGST------------YEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp EEEETTTTEEEEEETTT------------CCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE
T ss_pred EEEeCCCCeEEEEECCC------------CeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE
Confidence 56667789999999887 233334432 2356688998 8899999999999999996 78888888
Q ss_pred ccCCCCCeEEEEEe----CCCCCCCCceEEEeeC-CCeEEEEECCCcceeeeeeec----------cc-cEEEEEEecCC
Q 019326 79 HHHESSSVTSLAFY----TPQNLSVPRNLFSTSA-DGFVSIFDADPFVLLTSVKVH----------KK-GVNDLAVHHSG 142 (343)
Q Consensus 79 ~~~~~~~v~~l~~~----~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~----------~~-~v~~i~~~~~~ 142 (343)
... .....++|+ |++ ++++++.. +++|.++|..+.+.+..+... .. .+..+..++++
T Consensus 237 ~~G--~~P~~ia~s~~~~pDG-----k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~ 309 (567)
T 1qks_A 237 KIG--SEARSIETSKMEGWED-----KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR 309 (567)
T ss_dssp ECC--SEEEEEEECCSTTCTT-----TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS
T ss_pred ecC--CCCceeEEccccCCCC-----CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC
Confidence 765 456799999 688 67766655 689999999999888876532 12 67888888876
Q ss_pred CE-EEEEeCCCeEEEEEccCCceeE--EEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEecC------C
Q 019326 143 KL-ALTVGRDDCLAMVNLVRGRRSF--YHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELDG------K 211 (343)
Q Consensus 143 ~~-l~~~~~d~~i~~wd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~------~ 211 (343)
.. ++....+|.|.++|....+... ..........+.|+|++++++++ .++.|.++|+.+++....+.- .
T Consensus 310 ~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 310 PEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp SEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCC
T ss_pred CEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCC
Confidence 54 4555567999999998765333 33344567788999999998877 689999999999988766643 2
Q ss_pred cceEEeeecC-CC-eEEEEe-CCCcEEEEECCC-------CceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc
Q 019326 212 KRILCAAPGE-NG-VLFTGG-EDRSITAWDTNS-------GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS 281 (343)
Q Consensus 212 ~~i~~~~~~~-~~-~l~~~~-~dg~i~i~d~~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 281 (343)
+.-..+ +++ ++ +.+++. .++.|.++|..+ .+.++++. .....-..+..+|++. ++....
T Consensus 390 g~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~-~~g~g~~~i~~~p~~~---------~l~v~~ 458 (567)
T 1qks_A 390 GRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFP-ALGGGSLFIKTHPNSQ---------YLYVDA 458 (567)
T ss_dssp TTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE-CSCSCCCCEECCTTCS---------EEEEEC
T ss_pred ccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEe-cCCCCCEEEEeCCCCC---------eEEEec
Confidence 212222 333 34 444443 468999999987 56777777 4333334466777766 777765
Q ss_pred C-------CCcEEEEeccCccc---cCC---Cccc---cc-ccccceeEEEcCCCCceeccc
Q 019326 282 S-------DGVICVWDVRMAIK---EKP---LPLA---EA-KTNSRLTCLAGSSTKSFKRPQ 326 (343)
Q Consensus 282 ~-------dg~i~vwd~~~~~~---~~~---~~~~---~~-~~~~~i~~~~~s~~~~~~~~~ 326 (343)
. .+.|.|+|+.+... ... .++. .. ....++..+.++++|+++...
T Consensus 459 ~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s 520 (567)
T 1qks_A 459 TLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFS 520 (567)
T ss_dssp TTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEE
T ss_pred CCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEE
Confidence 2 35999999997611 111 1111 01 124578999999999876554
No 174
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=7.1e-17 Score=149.11 Aligned_cols=290 Identities=10% Similarity=0.037 Sum_probs=179.3
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCC-----eEEEEec--CceEEEeeCC---------CeEEEEEcCCC
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSP-----ITTVAVS--GTAAASGGTD---------DTIHLYDLSTS 72 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~~--~~~l~s~~~d---------g~i~iwd~~~~ 72 (343)
|+.|++||+.+ ++ ....+.+|... ...++|+ |++|+.++.+ +.+.+||+.++
T Consensus 35 ~~~i~~~~~~~-------~~-----~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~ 102 (740)
T 4a5s_A 35 ENNILVFNAEY-------GN-----SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR 102 (740)
T ss_dssp TTEEEEEETTT-------CC-----EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred CCcEEEEECCC-------Cc-----eEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC
Confidence 89999999987 22 22334555433 2346777 8888888876 56779999998
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeee-eeccccE-----------------E
Q 019326 73 SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSV-KVHKKGV-----------------N 134 (343)
Q Consensus 73 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~v-----------------~ 134 (343)
+... +..+ ...+...+|+|++ +.|+.+ .++.|++|++.+++..+.. .++...+ .
T Consensus 103 ~~~~-l~~~-~~~~~~~~~SPdG-----~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 103 QLIT-EERI-PNNTQWVTWSPVG-----HKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp EECC-SSCC-CTTEEEEEECSST-----TCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred cEEE-cccC-CCcceeeEECCCC-----CEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCc
Confidence 7654 5556 6789999999999 778777 4689999999887654321 2222222 3
Q ss_pred EEEEecCCCEEEEEeCCC------------------------------------eEEEEEccC---Cc---eeEEEE---
Q 019326 135 DLAVHHSGKLALTVGRDD------------------------------------CLAMVNLVR---GR---RSFYHK--- 169 (343)
Q Consensus 135 ~i~~~~~~~~l~~~~~d~------------------------------------~i~~wd~~~---~~---~~~~~~--- 169 (343)
.+.|+|||+.|+.++.|. .|++||+.+ ++ ......
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 489999999998875321 588899988 73 222221
Q ss_pred ---cCCcceEEEEeCCCCEEEEE-eC----CcEEEEEcccce----eE--EE---ecCCcce-----EEeeecC-CCeEE
Q 019326 170 ---IGKEASLIKFDGSGEKFFMV-TE----EKVGIHQAEDAK----LL--CE---LDGKKRI-----LCAAPGE-NGVLF 226 (343)
Q Consensus 170 ---~~~~~~~~~~~~~~~~~~~~-~~----~~i~~~d~~~~~----~~--~~---~~~~~~i-----~~~~~~~-~~~l~ 226 (343)
....+..++|+|+++.++.. .. ..|.+||+.+++ +. .. -.+...+ ....|++ ++.++
T Consensus 255 ~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 255 MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEE
T ss_pred CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEE
Confidence 23447789999999976665 32 269999999876 21 11 1233333 2567874 55554
Q ss_pred -EEe-CC--CcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcC----CCcEEEEeccCccccC
Q 019326 227 -TGG-ED--RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASS----DGVICVWDVRMAIKEK 298 (343)
Q Consensus 227 -~~~-~d--g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~----dg~i~vwd~~~~~~~~ 298 (343)
..+ .+ ..|++||...++. ..+. .....+..+.. +++. .++++++. .+...||.++......
T Consensus 335 ~~~s~~~G~~~l~~~~~~~~~~-~~lT-~g~~~v~~~~~-~d~~--------~i~f~~~~~~~~~~~~~ly~v~~~g~~~ 403 (740)
T 4a5s_A 335 KIISNEEGYRHICYFQIDKKDC-TFIT-KGTWEVIGIEA-LTSD--------YLYYISNEYKGMPGGRNLYKIQLIDYTK 403 (740)
T ss_dssp EEEECTTSCEEEEEEETTCSSC-EESC-CSSSCEEEEEE-ECSS--------EEEEEESCGGGCTTCBEEEEEETTEEEE
T ss_pred EEEEcCCCceEEEEEECCCCce-Eecc-cCCEEEEEEEE-EeCC--------EEEEEEecCCCCCceeEEEEEECCCCCc
Confidence 444 34 4588889886654 4555 33455555542 3333 14555554 2445666554321111
Q ss_pred CCcccc--cccccceeEEEcCCCCceeccccCC
Q 019326 299 PLPLAE--AKTNSRLTCLAGSSTKSFKRPQIGD 329 (343)
Q Consensus 299 ~~~~~~--~~~~~~i~~~~~s~~~~~~~~~~~~ 329 (343)
...+.. ...........||+++++++.....
T Consensus 404 ~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~ 436 (740)
T 4a5s_A 404 VTCLSCELNPERCQYYSVSFSKEAKYYQLRCSG 436 (740)
T ss_dssp EEESSTTTSTTTBCBEEEEECTTSSEEEEEECS
T ss_pred ceeeccccCCCCCceEEEEECCCCCEEEEEeCC
Confidence 101111 0123457889999999876644433
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.78 E-value=1.3e-16 Score=133.35 Aligned_cols=267 Identities=12% Similarity=0.044 Sum_probs=180.4
Q ss_pred CCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc
Q 019326 43 SPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120 (343)
Q Consensus 43 ~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 120 (343)
..|.+++|+ +..++..+.++.++.| .++....+..+ ...+.+++|++++ ++++++..++.|.+||..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~g-----~l~~~~~~~~~i~~~d~~~~ 76 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKK-GLQLEGLNFDRQG-----QLFLLDVFEGNIFKINPETK 76 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESS-CCCEEEEEECTTS-----CEEEEETTTCEEEEECTTTC
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEecc-CccccCcEECCCC-----CEEEEECCCCEEEEEeCCCC
Confidence 456777887 4556666778889999 35566667666 6778999999988 67778888999999999887
Q ss_pred ceeeeeeeccccEEEEEEecCCCEEEEEeCC----CeEEEEEccCCceeEEEE---cCCcceEEEEeCCCCEEEEEe---
Q 019326 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRD----DCLAMVNLVRGRRSFYHK---IGKEASLIKFDGSGEKFFMVT--- 190 (343)
Q Consensus 121 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--- 190 (343)
+.......+...+.+++++|+++++++...+ +.|.+||..++....... ....+..++++|+++.+++..
T Consensus 77 ~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 156 (333)
T 2dg1_A 77 EIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGY 156 (333)
T ss_dssp CEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCB
T ss_pred cEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecccc
Confidence 7655444566789999999999888777666 689999998876543322 234578899999998887764
Q ss_pred ----CCcEEEEEcccceeEEEecCCcceEEeeecC-CCeE-EEEeCCCcEEEEECCC-CceeEEe------c-ccccccE
Q 019326 191 ----EEKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVL-FTGGEDRSITAWDTNS-GKVAYCI------E-DAHSARV 256 (343)
Q Consensus 191 ----~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l-~~~~~dg~i~i~d~~~-~~~~~~~------~-~~h~~~v 256 (343)
.+.|..++..+++..........+..+++++ ++.+ ++.+.++.|.+||..+ +..+..+ . .++ ..+
T Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~ 235 (333)
T 2dg1_A 157 STNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGP 235 (333)
T ss_dssp TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEE
T ss_pred ccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCC
Confidence 2456666665554443333334567888885 4545 4555678999999964 3333211 1 012 467
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccccc--ccccceeEEEcCCCCceeccccCC
Q 019326 257 KGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEA--KTNSRLTCLAGSSTKSFKRPQIGD 329 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~~~~~~~~ 329 (343)
..+++.+++. ++++...++.|.+||.+.. .......... .....+.++++++++..+......
T Consensus 236 ~~i~~d~~G~---------l~v~~~~~~~v~~~d~~g~-~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 236 DSCCIDSDDN---------LYVAMYGQGRVLVFNKRGY-PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEEBTTCC---------EEEEEETTTEEEEECTTSC-EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CceEECCCCC---------EEEEEcCCCEEEEECCCCC-EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 8888888776 7777777899999998532 1111111000 000147889999987655444433
No 176
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.78 E-value=2.5e-16 Score=131.13 Aligned_cols=245 Identities=11% Similarity=0.035 Sum_probs=177.1
Q ss_pred CCCeEEEEEcCCCeeeeEecc----C-CCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEE
Q 019326 60 TDDTIHLYDLSTSSSLGAIHH----H-ESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVN 134 (343)
Q Consensus 60 ~dg~i~iwd~~~~~~~~~~~~----~-~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 134 (343)
.++.|.++|.++++....+.. . .......+.+.. + +.+++...++.|.+||..+++.+.++. ......
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~-----~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~ 87 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-G-----IGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPR 87 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-T-----EEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-C-----EEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCc
Confidence 478999999999987665421 1 023467788754 3 466777778999999999999988885 446788
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCC------cceEEEEeCCCCEEEEE--e-CCcEEEEEcccceeE
Q 019326 135 DLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGK------EASLIKFDGSGEKFFMV--T-EEKVGIHQAEDAKLL 205 (343)
Q Consensus 135 ~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--~-~~~i~~~d~~~~~~~ 205 (343)
.++++++++.+++...++.|.+||..+++......... .+..+++ ++..++++ . ++.|.++|+.+++..
T Consensus 88 ~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 99999988555554478999999999998877777666 6777887 34444444 2 789999999999998
Q ss_pred EEecCCcceEEeeecC-CCeEEEEeCC----------CcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCC
Q 019326 206 CELDGKKRILCAAPGE-NGVLFTGGED----------RSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENP 274 (343)
Q Consensus 206 ~~~~~~~~i~~~~~~~-~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 274 (343)
..+........+.+++ +++++++..+ +.|.++|..+++....+..........++++|++.
T Consensus 166 ~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~-------- 237 (328)
T 3dsm_A 166 DELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD-------- 237 (328)
T ss_dssp EEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSC--------
T ss_pred EEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCC--------
Confidence 8887555567778875 4444444443 78999999999887777622234789999999876
Q ss_pred eEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCC-CCceeccc
Q 019326 275 YLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSS-TKSFKRPQ 326 (343)
Q Consensus 275 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~~~~~ 326 (343)
+|+.+.. .|.+||..+++... ...... .......++++| ++.+.++.
T Consensus 238 -~lyv~~~--~v~~~d~~t~~~~~-~~~~~~-~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 238 -TLYWINN--DIWRMPVEADRVPV-RPFLEF-RDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp -EEEEESS--SEEEEETTCSSCCS-SCSBCC-CSSCEEEEEECTTTCCEEEEE
T ss_pred -EEEEEcc--EEEEEECCCCceee-eeeecC-CCCceEEEEEcCCCCeEEEEc
Confidence 7777654 89999998765321 111111 135688999998 56665655
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=5.5e-17 Score=148.20 Aligned_cols=238 Identities=11% Similarity=0.031 Sum_probs=165.6
Q ss_pred EecCCCCCeEEEEecCceEE--Ee--eCCCeEEEEEcCCCeeeeEeccCCCCCeE---------EEEEe--CCCCCCCCc
Q 019326 37 SYPAHLSPITTVAVSGTAAA--SG--GTDDTIHLYDLSTSSSLGAIHHHESSSVT---------SLAFY--TPQNLSVPR 101 (343)
Q Consensus 37 ~~~~h~~~v~~l~~~~~~l~--s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~v~---------~l~~~--~~~~~~~~~ 101 (343)
.+.+|...+..++++++.++ +. +.++...||....+.....+..+ ...+. ...|+ |++ +
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~SPDg-----~ 91 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPA-PWNVRNRVFEYSGFPWAGVPRPAG-----G 91 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCT-TCCBCCCGGGTCCCCEEEECCSSS-----S
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCC-CccccccccccCCccceeeeecCC-----C
Confidence 45578999999999955433 33 44788999996555556666666 45555 56666 888 5
Q ss_pred e-EEEee-CCCeEEEEECC--C-cceeeeeee-----ccccEEEEEEecCCCEEEEEeCC----------CeEEEEEccC
Q 019326 102 N-LFSTS-ADGFVSIFDAD--P-FVLLTSVKV-----HKKGVNDLAVHHSGKLALTVGRD----------DCLAMVNLVR 161 (343)
Q Consensus 102 ~-l~s~~-~dg~i~iwd~~--~-~~~~~~~~~-----~~~~v~~i~~~~~~~~l~~~~~d----------~~i~~wd~~~ 161 (343)
. |+.++ .+..|.++++. + ++ ...+.. |...+..++|+|||+.|+.++.+ ..|++||+.+
T Consensus 92 ~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 92 PLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp CEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred eEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 6 55444 36677777776 2 33 444444 56788999999999999998876 5899999988
Q ss_pred ------CceeEEE-EcCCcceEEEEeCCCCEEEEE-eC--------CcEEEEEcc-cc---eeEEEec-CCcceEEeeec
Q 019326 162 ------GRRSFYH-KIGKEASLIKFDGSGEKFFMV-TE--------EKVGIHQAE-DA---KLLCELD-GKKRILCAAPG 220 (343)
Q Consensus 162 ------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~--------~~i~~~d~~-~~---~~~~~~~-~~~~i~~~~~~ 220 (343)
++..... .....+..++|+|+|++++.+ .+ ..|.+||+. ++ +...... +...+..+.|+
T Consensus 171 ~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 171 SAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp TTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred CccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence 5543333 334556778999999999877 44 379999998 56 3333333 46788999998
Q ss_pred -CCCeEEEEeCCC--cEEEEECCCCceeEEeccccccc--------EEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 221 -ENGVLFTGGEDR--SITAWDTNSGKVAYCIEDAHSAR--------VKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 221 -~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~h~~~--------v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
+++++++++.++ .|.+||..+++...... .+... +..+++++++. ++++++. +.++||
T Consensus 251 pdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~~~~p~w~~~~~~~~~~~~~~---------~~~~~~~-~~~~l~ 319 (662)
T 3azo_A 251 PDGSLIVATDRTGWWNLHRVDPATGAATQLCR-REEEFAGPLWTPGMRWFAPLANGL---------IAVVHGK-GAAVLG 319 (662)
T ss_dssp TTSCEEEEECTTSSCEEEEECTTTCCEEESSC-CSSBSSCCCCSTTCCSEEECTTSC---------EEEEEBS-SSCEEE
T ss_pred CCCeEEEEECCCCCeEEEEEECCCCceeeccc-ccccccCccccccCceEeEeCCCE---------EEEEEEc-CccEEE
Confidence 456777777788 67777776666443333 33222 45677776665 8999998 999999
Q ss_pred ecc
Q 019326 290 DVR 292 (343)
Q Consensus 290 d~~ 292 (343)
.++
T Consensus 320 ~~d 322 (662)
T 3azo_A 320 ILD 322 (662)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.77 E-value=1.6e-15 Score=123.87 Aligned_cols=219 Identities=15% Similarity=0.165 Sum_probs=154.8
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEe------cCCCCCeEEEEe-c--CceEEEeeC-CCeEEEEEcCCC
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSY------PAHLSPITTVAV-S--GTAAASGGT-DDTIHLYDLSTS 72 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~l~~-~--~~~l~s~~~-dg~i~iwd~~~~ 72 (343)
+++...++.|++||... + ....+ .+|...+.++++ . +.++++... ++.|++|| .++
T Consensus 44 ~v~~~~~~~i~~~d~~g--------~-----~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g 109 (286)
T 1q7f_A 44 IVADTNNHRIQIFDKEG--------R-----FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYG 109 (286)
T ss_dssp EEEEGGGTEEEEECTTS--------C-----EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTS
T ss_pred EEEECCCCEEEEECCCC--------c-----EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCC
Confidence 34556788899998653 1 11122 235567899999 3 444444433 78999999 567
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeee--eccccEEEEEEecCCCEEEEEeC
Q 019326 73 SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK--VHKKGVNDLAVHHSGKLALTVGR 150 (343)
Q Consensus 73 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~~~~~ 150 (343)
+.+..+.......+..+++.+++ +++++...++.|.+||.. ++.+..+. .+...+..++++++++++++...
T Consensus 110 ~~~~~~~~~~~~~~~~i~~~~~g-----~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 110 QFVRKFGATILQHPRGVTVDNKG-----RIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp CEEEEECTTTCSCEEEEEECTTS-----CEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred cEEEEecCccCCCceEEEEeCCC-----CEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 77776654324678999999998 677777778999999965 45555554 23456899999999998888788
Q ss_pred CCeEEEEEccCCceeEEEEcC---CcceEEEEeCCCCEEEEE-eCC-cEEEEEcccceeEEEec-C--CcceEEeeecCC
Q 019326 151 DDCLAMVNLVRGRRSFYHKIG---KEASLIKFDGSGEKFFMV-TEE-KVGIHQAEDAKLLCELD-G--KKRILCAAPGEN 222 (343)
Q Consensus 151 d~~i~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~-~i~~~d~~~~~~~~~~~-~--~~~i~~~~~~~~ 222 (343)
++.|++||.. ++.+...... ..+..++++++++++++. .++ .|.+|+. +++.+..+. + ...+..++++++
T Consensus 184 ~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 184 AHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp GTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETT
T ss_pred CCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCC
Confidence 9999999974 4444444332 467889999999888887 565 9999995 456666554 2 234678888755
Q ss_pred CeEEEEeCCCcEEEEECCCCc
Q 019326 223 GVLFTGGEDRSITAWDTNSGK 243 (343)
Q Consensus 223 ~~l~~~~~dg~i~i~d~~~~~ 243 (343)
..+++++.++.|++|+.....
T Consensus 262 g~l~vs~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 262 GSVVLASKDYRLYIYRYVQLA 282 (286)
T ss_dssp TEEEEEETTTEEEEEECSCCC
T ss_pred CcEEEECCCCeEEEEEccccc
Confidence 445555779999999986544
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.76 E-value=6.9e-16 Score=129.57 Aligned_cols=236 Identities=17% Similarity=0.157 Sum_probs=161.7
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCC---C--eEEEEEcCCCeeeeEeccC
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTD---D--TIHLYDLSTSSSLGAIHHH 81 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~d---g--~i~iwd~~~~~~~~~~~~~ 81 (343)
++.|++|++.. ++. .. + ..+..++|+ |+.|+.++.+ + .|.+|++.+++.......+
T Consensus 42 ~~~l~~~d~~~-------~~~---~~---l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~ 104 (347)
T 2gop_A 42 ENTIVIENLKN-------NAR---RF---I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK 104 (347)
T ss_dssp EEEEEEEETTT-------CCE---EE---E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES
T ss_pred cceEEEEeCCC-------Cce---EE---c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC
Confidence 56778888765 221 11 1 467889998 7888877654 3 4888888888766655544
Q ss_pred CCCCeEEEEEeCCCCCCCCceEEEeeCC---------------------------CeEEEEECCCcceeeeeeeccccEE
Q 019326 82 ESSSVTSLAFYTPQNLSVPRNLFSTSAD---------------------------GFVSIFDADPFVLLTSVKVHKKGVN 134 (343)
Q Consensus 82 ~~~~v~~l~~~~~~~~~~~~~l~s~~~d---------------------------g~i~iwd~~~~~~~~~~~~~~~~v~ 134 (343)
. +..++|+|++ +.|+.++.+ ..|++||+.+++.+..+.. . .+.
T Consensus 105 --~-~~~~~wspdg-----~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~ 174 (347)
T 2gop_A 105 --N-IRSLEWNEDS-----RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFS 174 (347)
T ss_dssp --E-EEEEEECTTS-----SEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTC
T ss_pred --C-ccceeECCCC-----CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-Ccc
Confidence 3 9999999999 677776532 5799999988876455554 3 788
Q ss_pred EEEEecCCCEEEEEeCCC-------eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eC--------CcEEEEE
Q 019326 135 DLAVHHSGKLALTVGRDD-------CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TE--------EKVGIHQ 198 (343)
Q Consensus 135 ~i~~~~~~~~l~~~~~d~-------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~i~~~d 198 (343)
.++|+|++ +++++..++ ...+|.+.+++....... ..+ ..++|+|+.++.. .+ ..|.+||
T Consensus 175 ~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~--~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 175 SGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSF--YAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESE--EEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred cccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cce--eeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 99999999 777776542 344444445543333332 233 3349999988776 33 3577777
Q ss_pred cccceeEEEec-CCcceEE-eeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeE
Q 019326 199 AEDAKLLCELD-GKKRILC-AAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYL 276 (343)
Q Consensus 199 ~~~~~~~~~~~-~~~~i~~-~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 276 (343)
+++...... +...+.. +.|+ ++++++++.++.+++| +.+++.. .+. .+...|.++++++ . +
T Consensus 251 --~~~~~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~~g~~~-~~~-~~~~~v~~~~~s~--~---------~ 313 (347)
T 2gop_A 251 --GKEVMGILDEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IWDGEIK-PIA-KGRHWIMGFDVDE--I---------V 313 (347)
T ss_dssp --SSCEEESSTTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EESSSEE-EEE-CSSSEEEEEEESS--S---------E
T ss_pred --CCceEeccccCCcccCCccEEc-CcEEEEEecCCcEEEE-EcCCceE-EEe-cCCCeEEeeeeeC--c---------E
Confidence 555433333 4566775 8888 4488889999999999 8766654 343 4577899999988 3 7
Q ss_pred EEEEcCCCcE-EEEecc
Q 019326 277 VASASSDGVI-CVWDVR 292 (343)
Q Consensus 277 l~s~~~dg~i-~vwd~~ 292 (343)
+++++.++.. .+|.++
T Consensus 314 ~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 314 VYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEECSSSCCEEEEES
T ss_pred EEEEcCCCChHHheEeC
Confidence 8888777765 788775
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.76 E-value=1.8e-15 Score=124.21 Aligned_cols=233 Identities=7% Similarity=-0.033 Sum_probs=163.6
Q ss_pred ecCCCCCeEEEEec--Cc-eEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 38 YPAHLSPITTVAVS--GT-AAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 38 ~~~h~~~v~~l~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
+..+.....+++|+ ++ +++++..++.|..|+..++ ...+..+ ...+.++++++++ +++++...++.|.+
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~-~~~~~~l~~~~dg-----~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHP-SHHQNGHCLNKQG-----HLIACSHGLRRLER 94 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESS-CSSEEEEEECTTC-----CEEEEETTTTEEEE
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECC-CCCcceeeECCCC-----cEEEEecCCCeEEE
Confidence 33556678899998 65 7888888999999999877 5566666 6789999999998 66666666789999
Q ss_pred EECCCcceeeeeeec----cccEEEEEEecCCCEEEEE----e-------------CCCeEEEEEccCCceeEEEEcCCc
Q 019326 115 FDADPFVLLTSVKVH----KKGVNDLAVHHSGKLALTV----G-------------RDDCLAMVNLVRGRRSFYHKIGKE 173 (343)
Q Consensus 115 wd~~~~~~~~~~~~~----~~~v~~i~~~~~~~~l~~~----~-------------~d~~i~~wd~~~~~~~~~~~~~~~ 173 (343)
||..+++........ ...+..++++|+|+++++. + ..+.|..++.. ++..........
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~ 173 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK 173 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC
Confidence 999777654333222 1246789999999988873 2 13456666655 444333334456
Q ss_pred ceEEEEeCCCCEEEEE-eCCcEEEEEcc-ccee---EEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEE
Q 019326 174 ASLIKFDGSGEKFFMV-TEEKVGIHQAE-DAKL---LCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYC 247 (343)
Q Consensus 174 ~~~~~~~~~~~~~~~~-~~~~i~~~d~~-~~~~---~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 247 (343)
+..++|+|+++.+++. .++.|.+|++. +++. ...+. +...+..+++++++.++++. ++.|.+||.. ++.+..
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~ 251 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGR 251 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEE
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEE
Confidence 7889999999998555 67899999986 4443 22322 33445678887555555555 8899999987 778887
Q ss_pred ecccccccEEEEEEE-ecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 248 IEDAHSARVKGIVVL-TKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 248 ~~~~h~~~v~~~~~~-~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
+. .+.. +++++|. +++. .|+.++.++ +.-++.++
T Consensus 252 ~~-~~~~-~~~~~f~~~d~~---------~L~v~t~~~-l~~~~~~~ 286 (296)
T 3e5z_A 252 VL-TPQT-TSNLCFGGPEGR---------TLYMTVSTE-FWSIETNV 286 (296)
T ss_dssp EE-CSSC-CCEEEEESTTSC---------EEEEEETTE-EEEEECSC
T ss_pred EE-CCCC-ceeEEEECCCCC---------EEEEEcCCe-EEEEEccc
Confidence 77 5666 8999995 4544 777777663 33344444
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.76 E-value=2.5e-15 Score=126.18 Aligned_cols=250 Identities=12% Similarity=0.040 Sum_probs=163.7
Q ss_pred CeEEEEecCceEEEe---------eCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC---C-
Q 019326 44 PITTVAVSGTAAASG---------GTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD---G- 110 (343)
Q Consensus 44 ~v~~l~~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d---g- 110 (343)
.+...+++|+.++.. ..++.|.+||+.+++... + ..+..++|+|++ +.|+.++.+ +
T Consensus 16 ~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l-----~~~~~~~~SpDg-----~~la~~~~~~~~~~ 84 (347)
T 2gop_A 16 YLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I-----ENATMPRISPDG-----KKIAFMRANEEKKV 84 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E-----ESCEEEEECTTS-----SEEEEEEEETTTTE
T ss_pred EcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c-----ccCCCeEECCCC-----CEEEEEEeccCCCc
Confidence 345555576666553 236779999999876533 3 357889999999 777776653 3
Q ss_pred -eEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC---------------------------CeEEEEEccCC
Q 019326 111 -FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD---------------------------DCLAMVNLVRG 162 (343)
Q Consensus 111 -~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d---------------------------~~i~~wd~~~~ 162 (343)
.|.+||+.+++....... .. +..++|+|+++.|+.++.+ ..|.+||+.++
T Consensus 85 ~~l~~~~~~~g~~~~l~~~-~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEA-KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE-SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred ceEEEEECCCCceEEEEcC-CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 488888888776555443 34 9999999999988887642 57999999888
Q ss_pred ceeEEEEcCCcceEEEEeCCCCEEEEE-eC------C-cEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCC---
Q 019326 163 RRSFYHKIGKEASLIKFDGSGEKFFMV-TE------E-KVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGED--- 231 (343)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~-~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d--- 231 (343)
+.......+ .+..+.|+|++ .++++ .+ . ...+|.+.+++......+ ..+..+ ..+++.|+.++.+
T Consensus 163 ~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~-spdg~~l~~~~~~~~~ 238 (347)
T 2gop_A 163 EVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV-DSDGERILLYGKPEKK 238 (347)
T ss_dssp EEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE-EECSSCEEEEECCSSS
T ss_pred eEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE-CCCCCEEEEEEccccC
Confidence 762322224 78899999999 66666 32 2 345554445544333334 455555 2256667666543
Q ss_pred -----CcEEEEECCCCceeEEecccccccEEE-EEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccccc
Q 019326 232 -----RSITAWDTNSGKVAYCIEDAHSARVKG-IVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEA 305 (343)
Q Consensus 232 -----g~i~i~d~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 305 (343)
..|.+|| +++.. .+...|...+.. +.|+ ++ ++++++.++.++|| +.++. ...+ .
T Consensus 239 ~~~~~~~l~~~d--~~~~~-~l~~~~~~~~~~~~~~s-dg----------~~~~~~~~~~~~l~-~~~g~---~~~~--~ 298 (347)
T 2gop_A 239 YMSEHNKLYIYD--GKEVM-GILDEVDRGVGQAKIKD-GK----------VYFTLFEEGSVNLY-IWDGE---IKPI--A 298 (347)
T ss_dssp CCCSSCEEEEEC--SSCEE-ESSTTCCSEEEEEEEET-TE----------EEEEEEETTEEEEE-EESSS---EEEE--E
T ss_pred CccccceEEEEC--CCceE-eccccCCcccCCccEEc-Cc----------EEEEEecCCcEEEE-EcCCc---eEEE--e
Confidence 4688888 55543 443266777876 7786 43 78899999999999 87432 1122 1
Q ss_pred ccccceeEEEcCCCCceeccccCCCCC
Q 019326 306 KTNSRLTCLAGSSTKSFKRPQIGDSAP 332 (343)
Q Consensus 306 ~~~~~i~~~~~s~~~~~~~~~~~~~~~ 332 (343)
.....|.++++++ .+.+....+..+
T Consensus 299 ~~~~~v~~~~~s~--~~~~~~~~~~~~ 323 (347)
T 2gop_A 299 KGRHWIMGFDVDE--IVVYLKETATRL 323 (347)
T ss_dssp CSSSEEEEEEESS--SEEEEEECSSSC
T ss_pred cCCCeEEeeeeeC--cEEEEEcCCCCh
Confidence 2245688899998 455555555443
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.75 E-value=1.6e-15 Score=122.74 Aligned_cols=226 Identities=11% Similarity=0.081 Sum_probs=170.5
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC-CCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL-SPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~ 78 (343)
.|++++.++.|++||.++ .+.+.++..+. ..+.++++. |++++ +.++.|..||. +++.+..+
T Consensus 7 ~lv~~~~~~~v~~~d~~t------------G~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDT------------KEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNI 71 (276)
T ss_dssp EEEECTTCSEEEEEETTT------------TEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEE
T ss_pred EEEeeCCCCEEEEEECCC------------CeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEE
Confidence 378899999999999866 24455555554 467888887 77777 45778999999 89999999
Q ss_pred ccCCCCCeEEEEEeCCCCCCCCceEEEeeC-CCeEEEEECCCcceeeeeee------ccccEEEEEEecCCCEEEEEeCC
Q 019326 79 HHHESSSVTSLAFYTPQNLSVPRNLFSTSA-DGFVSIFDADPFVLLTSVKV------HKKGVNDLAVHHSGKLALTVGRD 151 (343)
Q Consensus 79 ~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~------~~~~v~~i~~~~~~~~l~~~~~d 151 (343)
..+....+.++.+.+++ +.+++.+. ++.|..+|. +++.+..+.. +......+++.++|+++++...+
T Consensus 72 ~~~~~~~~~~~~~~~dG-----~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~ 145 (276)
T 3no2_A 72 AAPAGCEMQTARILPDG-----NALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT 145 (276)
T ss_dssp ECCTTCEEEEEEECTTS-----CEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT
T ss_pred cCCCCccccccEECCCC-----CEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC
Confidence 87523578899999999 78888777 788888886 5677766652 22244566788999999999999
Q ss_pred CeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCC-------cceEEeeecC-C
Q 019326 152 DCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGK-------KRILCAAPGE-N 222 (343)
Q Consensus 152 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~-------~~i~~~~~~~-~ 222 (343)
+.|..||.. ++.+........+..+...++++.+++. .++.+..+|..+++.+.++... ..+..+...+ +
T Consensus 146 ~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G 224 (276)
T 3no2_A 146 SEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNG 224 (276)
T ss_dssp TEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTS
T ss_pred CEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCC
Confidence 999999998 9988888887777888889999999888 6668999999999999988621 1255666654 4
Q ss_pred CeEEEEeCC--------CcEEEEEC-CCCceeEEec
Q 019326 223 GVLFTGGED--------RSITAWDT-NSGKVAYCIE 249 (343)
Q Consensus 223 ~~l~~~~~d--------g~i~i~d~-~~~~~~~~~~ 249 (343)
+++++.... +..+++.+ .+++.+.++.
T Consensus 225 ~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~ 260 (276)
T 3no2_A 225 GLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN 260 (276)
T ss_dssp CEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred CEEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence 555554211 13345555 5788888877
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.75 E-value=5.9e-16 Score=129.01 Aligned_cols=245 Identities=10% Similarity=-0.018 Sum_probs=172.2
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCC------------------------CeEEEEECCCcceeeeee-eccccEEEEE
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSAD------------------------GFVSIFDADPFVLLTSVK-VHKKGVNDLA 137 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~d------------------------g~i~iwd~~~~~~~~~~~-~~~~~v~~i~ 137 (343)
-..+.+++++|++ +++++...+ +.|.+||..+++.+..+. .+-.....++
T Consensus 23 l~~v~~va~d~~G-----~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia 97 (329)
T 3fvz_A 23 PGQVSGVALDSKN-----NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLS 97 (329)
T ss_dssp CSCEEEEEECTTC-----CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEE
T ss_pred cCCceEEEECCCC-----CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEE
Confidence 4679999999998 677777766 479999998888776554 3335789999
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCc-eeEEEEc----------CCcceEEEEeC-CCCEEEEE--eCCcEEEEEcccce
Q 019326 138 VHHSGKLALTVGRDDCLAMVNLVRGR-RSFYHKI----------GKEASLIKFDG-SGEKFFMV--TEEKVGIHQAEDAK 203 (343)
Q Consensus 138 ~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~----------~~~~~~~~~~~-~~~~~~~~--~~~~i~~~d~~~~~ 203 (343)
++|+++++++...++.|+.||..... .+..... -..+..++++| ++..+++. .++.|++|+ .+++
T Consensus 98 ~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~ 176 (329)
T 3fvz_A 98 IDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGK 176 (329)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSC
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCC
Confidence 99999988888889999999986542 3333321 12578899999 77777776 378999999 5677
Q ss_pred eEEEecCC-----------cceEEeeecC--CCeEEEEeCCCcEEEEECCCCceeEEecc-cccccEEEEEEEecCCCCC
Q 019326 204 LLCELDGK-----------KRILCAAPGE--NGVLFTGGEDRSITAWDTNSGKVAYCIED-AHSARVKGIVVLTKNDGGS 269 (343)
Q Consensus 204 ~~~~~~~~-----------~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~ 269 (343)
.+..+... .....+++++ +.++++...++.|++||..+++.+..+.. .+...+.+++++| +. .
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~--~ 253 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GF--L 253 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TE--E
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CE--E
Confidence 77666411 2377888874 45666667789999999998998888741 4667788999988 31 0
Q ss_pred CCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCCCCccc
Q 019326 270 TAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAPKGEEK 337 (343)
Q Consensus 270 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (343)
+..++..+++...+..|++|++.++........ .......+..+++++++.+.++...++.+..++.
T Consensus 254 ~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~-~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 254 FAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP-VRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EEEECCCCTTCSCCCCEEEEETTTCCEEEEECC-SSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred EEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC-CCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 000111223333456899999988743221110 0122345889999999998888888887665544
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.74 E-value=1.7e-15 Score=139.36 Aligned_cols=239 Identities=14% Similarity=0.065 Sum_probs=167.0
Q ss_pred CCCCCeEEEEec--CceEEEeeCCC-----eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCe-
Q 019326 40 AHLSPITTVAVS--GTAAASGGTDD-----TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF- 111 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~- 111 (343)
+|...+..++|+ |++||.+..++ .|++||+.+++.......+ ..+..++|+|++ +.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~--~~~~~~~wspDg-----~~l~~~~~~~~~ 194 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDG-----KGMFYNAYPQQD 194 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTS-----SEEEEEECCCCS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC--cccceEEEEeCC-----CEEEEEEECCcc
Confidence 344568889999 78888665533 8999999999877644333 336789999999 78888887765
Q ss_pred ---------------EEEEECCCccee--eeee--eccccEEEEEEecCCCEEEEEeC-----CCeEEEEEccC------
Q 019326 112 ---------------VSIFDADPFVLL--TSVK--VHKKGVNDLAVHHSGKLALTVGR-----DDCLAMVNLVR------ 161 (343)
Q Consensus 112 ---------------i~iwd~~~~~~~--~~~~--~~~~~v~~i~~~~~~~~l~~~~~-----d~~i~~wd~~~------ 161 (343)
|++|++.+++.. ..+. .|...+..+.|+|+|++|+..+. +..|.+||+.+
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 274 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGIT 274 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSC
T ss_pred ccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccC
Confidence 999999876532 2222 24456789999999999888765 57899999987
Q ss_pred Cc-eeEEEEcCCcceEEEEeCCCCEEEEE-e----CCcEEEEEccccee---EEEecCCc--ceEEeeec-CCCeEEEEe
Q 019326 162 GR-RSFYHKIGKEASLIKFDGSGEKFFMV-T----EEKVGIHQAEDAKL---LCELDGKK--RILCAAPG-ENGVLFTGG 229 (343)
Q Consensus 162 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~i~~~d~~~~~~---~~~~~~~~--~i~~~~~~-~~~~l~~~~ 229 (343)
+. ...............|+|++..++.. . ...|.+||+.++.. ...+.+.. .+..+.++ ++.++++..
T Consensus 275 ~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 275 GILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp SSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE
T ss_pred CccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEE
Confidence 42 22333322222233588899888776 3 23589999887642 22333433 57788887 455777777
Q ss_pred CCCc--EEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEE-EEc---CCCcEEEEeccCcc
Q 019326 230 EDRS--ITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVA-SAS---SDGVICVWDVRMAI 295 (343)
Q Consensus 230 ~dg~--i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~-s~~---~dg~i~vwd~~~~~ 295 (343)
.++. |.+||+.+++.+..+. .+...+..+.+++++. .++ +.+ ..++|++||+.++.
T Consensus 355 ~~g~~~l~~~~~~~g~~~~~l~-~~~~~v~~~~~s~d~~---------~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 355 HDVKNTLQLHDLATGALLKIFP-LEVGSVVGYSGQKKDT---------EIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ETTEEEEEEEETTTCCEEEEEC-CCSSEEEEEECCTTCS---------EEEEEEECSSCCCEEEEEETTSSS
T ss_pred ECCEEEEEEEECCCCCEEEecC-CCCceEEEEecCCCCC---------EEEEEEeCCCCCCEEEEEECCCCc
Confidence 7874 6677887788788887 6777888888887664 444 333 35789999998764
No 185
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=5.4e-16 Score=141.65 Aligned_cols=258 Identities=9% Similarity=0.007 Sum_probs=167.0
Q ss_pred ccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeE---------EEEec----Cce-EEEeeC-CCeEEEEEcC-
Q 019326 7 SYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPIT---------TVAVS----GTA-AASGGT-DDTIHLYDLS- 70 (343)
Q Consensus 7 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~---------~l~~~----~~~-l~s~~~-dg~i~iwd~~- 70 (343)
+.++...||.... + .....+..|...+. ...|+ ++. |+.++. +..|.++++.
T Consensus 44 ~~~~~~~l~~~~~-------~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~ 111 (662)
T 3azo_A 44 AEAGRATLVRRRA-------D-----GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDA 111 (662)
T ss_dssp TTTTEEEEEEECT-------T-----SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTS
T ss_pred ccCCcEEEEEECC-------C-----CCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCC
Confidence 4477888888633 1 11233444554544 44443 676 665443 5667777765
Q ss_pred -CCeeeeEecc-----CCCCCeEEEEEeCCCCCCCCceEEEeeCC----------CeEEEEECCC------cceeeeee-
Q 019326 71 -TSSSLGAIHH-----HESSSVTSLAFYTPQNLSVPRNLFSTSAD----------GFVSIFDADP------FVLLTSVK- 127 (343)
Q Consensus 71 -~~~~~~~~~~-----~~~~~v~~l~~~~~~~~~~~~~l~s~~~d----------g~i~iwd~~~------~~~~~~~~- 127 (343)
.......+.. + ...+..++|+|++ +.|++++.+ ..|++||+.+ ++. ..+.
T Consensus 112 ~g~~~~~~l~~~~~~~~-~~~~~~~~~spDg-----~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~ 184 (662)
T 3azo_A 112 PGGAVPRPLTPVSAVGG-GLRWADPVLLPER-----GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSD 184 (662)
T ss_dssp TTCCCCEECSCCCCSTT-CEEEEEEEEETTT-----TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSC
T ss_pred CCCCCCEeccCCccCCC-CccccCcEECCCC-----CEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEe
Confidence 2033444544 4 5678999999999 788888876 5899999987 554 3444
Q ss_pred eccccEEEEEEecCCCEEEEEeCC--------CeEEEEEcc-CC---ceeEEEEc-CCcceEEEEeCCCCEEEEE-eCC-
Q 019326 128 VHKKGVNDLAVHHSGKLALTVGRD--------DCLAMVNLV-RG---RRSFYHKI-GKEASLIKFDGSGEKFFMV-TEE- 192 (343)
Q Consensus 128 ~~~~~v~~i~~~~~~~~l~~~~~d--------~~i~~wd~~-~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~- 192 (343)
.+...+..++|+|||++|+.++.+ ..|.+||+. ++ +....... ...+..+.|+|+|++++++ .++
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~ 264 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGW 264 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSS
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCC
Confidence 455678889999999999887755 379999998 56 33333333 4678889999999977666 566
Q ss_pred -cEEEEEcccceeEEEecCCcc---------eEEeeec-CCCeEEEEeCCCcEEEE--ECCCCceeEEecccccccEEEE
Q 019326 193 -KVGIHQAEDAKLLCELDGKKR---------ILCAAPG-ENGVLFTGGEDRSITAW--DTNSGKVAYCIEDAHSARVKGI 259 (343)
Q Consensus 193 -~i~~~d~~~~~~~~~~~~~~~---------i~~~~~~-~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~h~~~v~~~ 259 (343)
.|.+||+.+++......+... +..++++ ++.++++++. +.++|| |..+++ +..+. .|...+..+
T Consensus 265 ~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~ 341 (662)
T 3azo_A 265 WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAA-GPWTEWAAT 341 (662)
T ss_dssp CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECC-SSCCEEEEE
T ss_pred eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEec-CCCCeEEEE
Confidence 566777666665444333222 4567776 4567788888 999999 655554 67777 677777766
Q ss_pred EEEecCCCCCCCCCCeEEEEEcCCCcEEE--EeccCc
Q 019326 260 VVLTKNDGGSTAENPYLVASASSDGVICV--WDVRMA 294 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~v--wd~~~~ 294 (343)
. ++++.. .++++++.+....+ ||+.++
T Consensus 342 ~-s~~~~~-------~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 342 L-TVSGTR-------AVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp E-EEETTE-------EEEEEEETTEEEEEEEEETTTC
T ss_pred E-ecCCCE-------EEEEEcCCCCCCEEEEEECCCC
Confidence 2 344331 14455566654444 455554
No 186
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.73 E-value=4.1e-15 Score=125.36 Aligned_cols=236 Identities=9% Similarity=0.082 Sum_probs=168.1
Q ss_pred cCCeEEEEEeecCCCCCCCCcceeeEEeEEecC------CCCCeEEEEec--CceEEEeeC--CCeEEEEEcCCCeeeeE
Q 019326 8 YEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPA------HLSPITTVAVS--GTAAASGGT--DDTIHLYDLSTSSSLGA 77 (343)
Q Consensus 8 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~~--~~~l~s~~~--dg~i~iwd~~~~~~~~~ 77 (343)
.++.|.+||..+ .+.+..+.. +......++++ |++|+++.. ++.|.+||+.+++.+..
T Consensus 79 ~~~~v~v~d~~t------------~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 79 RSDVVEVWDADK------------LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp EEEEEEEEETTT------------CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEECcC------------CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 367899999876 222222221 22456678887 888888764 58999999999988877
Q ss_pred -eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC-cceeee------eeeccccEEEEEEecCCCEEEEEe
Q 019326 78 -IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP-FVLLTS------VKVHKKGVNDLAVHHSGKLALTVG 149 (343)
Q Consensus 78 -~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~------~~~~~~~v~~i~~~~~~~~l~~~~ 149 (343)
+... ....+.+.|.+. ..+++.+.||.+.+|+... ++.... +.....++ .+.+.+++..++..+
T Consensus 147 ~i~~~---~~~~v~~~p~~~----~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 218 (361)
T 2oiz_A 147 VTAAA---GCWSVIPQPNRP----RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVS 218 (361)
T ss_dssp EGGGT---TEEEEEECTTSS----SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEB
T ss_pred EecCC---CcceeEEcCCCC----eeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEe
Confidence 5533 223356777762 5788899999999999864 444421 11122222 334467777777788
Q ss_pred CCCeEEEEEccCCceeEE--EEc-----------CCcceEEEEeCCCCEEEEE-e-----------CCcEEEEEccccee
Q 019326 150 RDDCLAMVNLVRGRRSFY--HKI-----------GKEASLIKFDGSGEKFFMV-T-----------EEKVGIHQAEDAKL 204 (343)
Q Consensus 150 ~d~~i~~wd~~~~~~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~-~-----------~~~i~~~d~~~~~~ 204 (343)
.++.+.++|+........ ... +.....++++|++..++++ . .+.+.+||+.+++.
T Consensus 219 ~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~ 298 (361)
T 2oiz_A 219 YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR 298 (361)
T ss_dssp TTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE
T ss_pred CCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE
Confidence 899999999976543221 111 1112237899999988877 4 24799999999999
Q ss_pred EEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCC--ceeEEecccccccEEEEEEEecCC
Q 019326 205 LCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSG--KVAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 205 ~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
+..+.... +..++++ ++++|++++. +.|.+||..++ +.+.++. .+......++++|++.
T Consensus 299 v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~-~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 299 VARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIE-GAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEET-TSCSSEEEEEECCCSC
T ss_pred EEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEec-cCCCCcEEEEecCCCC
Confidence 99998555 8999998 4678888776 99999999999 9998886 6788889999998864
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=5.5e-15 Score=119.49 Aligned_cols=234 Identities=12% Similarity=0.014 Sum_probs=162.4
Q ss_pred CeEEEEec--CceEE-EeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc
Q 019326 44 PITTVAVS--GTAAA-SGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120 (343)
Q Consensus 44 ~v~~l~~~--~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 120 (343)
...+++++ +++++ +...++.|.+|+..+.......... ...+.++++.+++ +++++.. ++.|.+||..+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g-----~l~v~~~-~~~i~~~d~~~~ 97 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNG-LYQPQGLAVDGAG-----TVYVTDF-NNRVVTLAAGSN 97 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCS-CCSCCCEEECTTC-----CEEEEET-TTEEEEECTTCS
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCC-cCCcceeEECCCC-----CEEEEcC-CCEEEEEeCCCc
Confidence 67889997 66555 4467889999998765433222223 3578899999988 5555544 889999998765
Q ss_pred ceeeeee-eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-CCcceEEEEeCCCCEEEEE-eCCcEEEE
Q 019326 121 VLLTSVK-VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-GKEASLIKFDGSGEKFFMV-TEEKVGIH 197 (343)
Q Consensus 121 ~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~i~~~ 197 (343)
.. ..+. .....+..++++++++++++...++.|.+|+..+......... ...+..++++++++.+++. .++.|.+|
T Consensus 98 ~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 98 NQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp CC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred eE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence 43 2232 2235789999999999887777789999997655543322111 2457789999999876666 67899999
Q ss_pred EcccceeEEEec-CCcceEEeeecCC-CeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCe
Q 019326 198 QAEDAKLLCELD-GKKRILCAAPGEN-GVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPY 275 (343)
Q Consensus 198 d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 275 (343)
+........... +...+..++++++ .++++...++.|.+||....... .....+...+.++++.+++.
T Consensus 177 ~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~--------- 246 (270)
T 1rwi_B 177 EAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST-VLPFTGLNTPLAVAVDSDRT--------- 246 (270)
T ss_dssp CTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE-ECCCCSCSCEEEEEECTTCC---------
T ss_pred ecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce-eeccCCCCCceeEEECCCCC---------
Confidence 988766543322 3366788898754 45555556889999998755433 33313446789999988876
Q ss_pred EEEEEcCCCcEEEEeccCcc
Q 019326 276 LVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 276 ~l~s~~~dg~i~vwd~~~~~ 295 (343)
++++...++.|+++++...+
T Consensus 247 l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 247 VYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEEEGGGTEEEEECCCGGG
T ss_pred EEEEECCCCEEEEEcCCCcc
Confidence 88899999999999998753
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=9.7e-15 Score=119.79 Aligned_cols=231 Identities=12% Similarity=0.030 Sum_probs=164.1
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCCCCCc-eEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC
Q 019326 73 SSLGAIHHHESSSVTSLAFYTPQNLSVPR-NLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD 151 (343)
Q Consensus 73 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d 151 (343)
..+..+..+ .....+++|+|++ + +++++..++.|..||..++ ...+..+...+.+++++|+++++++...+
T Consensus 18 ~~~~~l~~~-~~~~eg~~~d~~g-----~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~ 89 (296)
T 3e5z_A 18 AEARRLADG-FTWTEGPVYVPAR-----SAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGL 89 (296)
T ss_dssp CCCEEEECC-CSSEEEEEEEGGG-----TEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTT
T ss_pred CcEEEEecC-CccccCCeEeCCC-----CEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCC
Confidence 334445455 5678899999998 5 7888889999999999886 66666677789999999999988877777
Q ss_pred CeEEEEEccCCceeEEEEc-----CCcceEEEEeCCCCEEEEEe------------------CCcEEEEEcccceeEEEe
Q 019326 152 DCLAMVNLVRGRRSFYHKI-----GKEASLIKFDGSGEKFFMVT------------------EEKVGIHQAEDAKLLCEL 208 (343)
Q Consensus 152 ~~i~~wd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~------------------~~~i~~~d~~~~~~~~~~ 208 (343)
+.|.+||..+++....... ...+..++++|+|+++++.. .+.|..++.. ++.....
T Consensus 90 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (296)
T 3e5z_A 90 RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPI 168 (296)
T ss_dssp TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEE
T ss_pred CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEee
Confidence 9999999988875443221 13456799999999888631 2356666655 5544444
Q ss_pred cCCcceEEeeecC-CCeEEEEeCCCcEEEEECC-CCce---eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC
Q 019326 209 DGKKRILCAAPGE-NGVLFTGGEDRSITAWDTN-SGKV---AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD 283 (343)
Q Consensus 209 ~~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d 283 (343)
.+......+++++ ++.+++.+.++.|.+||+. +++. ...+. .+...+.++++.+++. ++++. +
T Consensus 169 ~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~p~~i~~d~~G~---------l~v~~--~ 236 (296)
T 3e5z_A 169 RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFT-VEPGKTDGLRVDAGGL---------IWASA--G 236 (296)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEEC-CSSSCCCSEEEBTTSC---------EEEEE--T
T ss_pred cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEee-CCCCCCCeEEECCCCC---------EEEEc--C
Confidence 4566678899984 5666777778999999987 5554 33342 4566677889988875 66555 8
Q ss_pred CcEEEEeccCccccCCCcccccccccceeEEEc-CCCCceeccccCCC
Q 019326 284 GVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAG-SSTKSFKRPQIGDS 330 (343)
Q Consensus 284 g~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~~~~~~~~~ 330 (343)
+.|.+||.+. . .+..+.....+.++++ +++++.+.....++
T Consensus 237 ~~v~~~~~~g-~-----~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 237 DGVHVLTPDG-D-----ELGRVLTPQTTSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp TEEEEECTTS-C-----EEEEEECSSCCCEEEEESTTSCEEEEEETTE
T ss_pred CeEEEECCCC-C-----EEEEEECCCCceeEEEECCCCCEEEEEcCCe
Confidence 8999999863 2 1222222222888888 68888777666654
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.72 E-value=4.2e-13 Score=109.91 Aligned_cols=266 Identities=12% Similarity=0.077 Sum_probs=181.5
Q ss_pred ecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEe-ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 38 YPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAI-HHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 38 ~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
+..+...+.+++++ ++.+++...++.|.+||.. ++..... ... ...+.++++.+++ .++++...++.|..
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~-~~~~~~i~~~~~g-----~l~v~~~~~~~i~~ 82 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTP-DAKVMCLTISSDG-----EVWFTENAANKIGR 82 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSST-TCCEEEEEECTTS-----CEEEEETTTTEEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcc-cCceeeEEECCCC-----CEEEeCCCCCeEEE
Confidence 34556789999998 5555555557899999988 5443322 223 5779999999988 56666666889999
Q ss_pred EECCCcceeeeee--eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE--cCCcceEEEEeCCCCEEEEE-
Q 019326 115 FDADPFVLLTSVK--VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK--IGKEASLIKFDGSGEKFFMV- 189 (343)
Q Consensus 115 wd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~- 189 (343)
||... + ...+. .....+..+++.++++++++...++.|..||. +++...... ....+..+++++++..+++.
T Consensus 83 ~~~~g-~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 83 ITKKG-I-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp ECTTS-C-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred ECCCC-c-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeC
Confidence 99863 3 22332 23457899999999988887777889999998 555432221 12557889999999887777
Q ss_pred eCCcEEEEEcccceeEEE-ec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCC
Q 019326 190 TEEKVGIHQAEDAKLLCE-LD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 190 ~~~~i~~~d~~~~~~~~~-~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
.++.+..||. +++.... .. ....+..+++++ +.+.++...++.|.+||. +++........+...+.++++.+++.
T Consensus 160 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~ 237 (299)
T 2z2n_A 160 QNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGID 237 (299)
T ss_dssp TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred CCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCC
Confidence 6789999998 6655432 22 345577888875 455455455789999999 66643321213556789999988875
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCC
Q 019326 267 GGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGD 329 (343)
Q Consensus 267 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~ 329 (343)
++++...++.|..||.. +.. . .+........+.++++ +++.+.+.....
T Consensus 238 ---------l~v~~~~~~~i~~~d~~-g~~-~--~~~~~~~~~~~~~i~~-~~g~l~v~~~~~ 286 (299)
T 2z2n_A 238 ---------LWFTEWGANKIGRLTSN-NII-E--EYPIQIKSAEPHGICF-DGETIWFAMECD 286 (299)
T ss_dssp ---------EEEEETTTTEEEEEETT-TEE-E--EEECSSSSCCEEEEEE-CSSCEEEEETTT
T ss_pred ---------EEEeccCCceEEEECCC-Cce-E--EEeCCCCCCccceEEe-cCCCEEEEecCC
Confidence 77776678899999984 321 1 1101112346888999 888877665433
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.72 E-value=8.6e-16 Score=140.90 Aligned_cols=239 Identities=8% Similarity=-0.018 Sum_probs=164.3
Q ss_pred CCCCCeEEEEec--CceEE-----EeeCCCeEEEEEcCCCeee-eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCe
Q 019326 40 AHLSPITTVAVS--GTAAA-----SGGTDDTIHLYDLSTSSSL-GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF 111 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~-----s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 111 (343)
+|...+.+++|+ |++|| .|+.+..|++||+.+++.+ .... . ......++|+|++ +.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~-~~~~~~~~wspDg-----~~l~~~~~d~~ 190 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI-E-GGKYATPKWTPDS-----KGFYYEWLPTD 190 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB-S-CCTTCCCEECTTS-----SEEEEEECCCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc-C-cccccceEEecCC-----CEEEEEEecCC
Confidence 466678899999 78888 5555678999999998865 2111 1 1222689999999 78888888776
Q ss_pred -------------EEEEECCCcc----eeeeeeeccccEEEEEEecCCCEEEEEeCCC----eEEEEEccCCceeEEEEc
Q 019326 112 -------------VSIFDADPFV----LLTSVKVHKKGVNDLAVHHSGKLALTVGRDD----CLAMVNLVRGRRSFYHKI 170 (343)
Q Consensus 112 -------------i~iwd~~~~~----~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~ 170 (343)
|++|++.+++ ++.....+...+..+.|+|+|++|+..+.++ .|.+|+..+++.......
T Consensus 191 ~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~ 270 (695)
T 2bkl_A 191 PSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKG 270 (695)
T ss_dssp TTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEEC
T ss_pred CCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecC
Confidence 9999998765 3333334556788999999999988887666 677777655554444444
Q ss_pred CCcceEEEEeCCCCEEEEEe----CCcEEEEEccccee---EEEecC--CcceEEeeecCCCeEEEEeCCCcEEEEECC-
Q 019326 171 GKEASLIKFDGSGEKFFMVT----EEKVGIHQAEDAKL---LCELDG--KKRILCAAPGENGVLFTGGEDRSITAWDTN- 240 (343)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~----~~~i~~~d~~~~~~---~~~~~~--~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~- 240 (343)
........+ +++..++... ++.|.+||+.++.. ...+.+ ...+..+.++++.++++...|+..++|.+.
T Consensus 271 ~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 271 VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATL 349 (695)
T ss_dssp SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEET
T ss_pred CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeC
Confidence 444555555 5555434333 47899999987653 333333 445778888777788888999988887654
Q ss_pred CCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEE-E---EcCCCcEEEEeccCcc
Q 019326 241 SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVA-S---ASSDGVICVWDVRMAI 295 (343)
Q Consensus 241 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~-s---~~~dg~i~vwd~~~~~ 295 (343)
+++....+...+...+..+.+++++. .++ + ....++|++||+.++.
T Consensus 350 ~g~~~~~l~~~~~~~v~~~~~s~d~~---------~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 350 KGKPVRTVQLPGVGAASNLMGLEDLD---------DAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp TCCEEEECCCSSSSEECCCBSCTTCS---------EEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCCeeEEecCCCCeEEEEeecCCCCC---------EEEEEEcCCCCCCEEEEEECCCCc
Confidence 46666666622366777777777654 455 2 2345789999998763
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.70 E-value=1.5e-13 Score=121.75 Aligned_cols=258 Identities=13% Similarity=0.076 Sum_probs=181.0
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC--Ccceeeeeeec
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD--PFVLLTSVKVH 129 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~ 129 (343)
+.++++...++.|.++|..+++.+..+... ..+..+.|+|++ +++++++.|+.|.+||+. +++.+.++...
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g--~~p~~v~~SpDG-----r~lyv~~~dg~V~viD~~~~t~~~v~~i~~G 239 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTG--YAVHISRLSASG-----RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG 239 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECS--SCEEEEEECTTS-----CEEEEEETTSEEEEEETTSSSCCEEEEEECC
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCC--CCccceEECCCC-----CEEEEEcCCCeEEEEECCCCCCcEeEEEecC
Confidence 446667778899999999999999888765 567899999999 899999999999999995 77888877753
Q ss_pred cccEEEEEEe----cCCCEEEEEeC-CCeEEEEEccCCceeEEEEcC------------CcceEEEEeCCCCEEEEE--e
Q 019326 130 KKGVNDLAVH----HSGKLALTVGR-DDCLAMVNLVRGRRSFYHKIG------------KEASLIKFDGSGEKFFMV--T 190 (343)
Q Consensus 130 ~~~v~~i~~~----~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~--~ 190 (343)
. ....++|+ |+|++++++.. ++++.++|..+.+.+...... ..+..+..++++..++.. .
T Consensus 240 ~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 240 S-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp S-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred C-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 3 46789999 69988887765 599999999999887765542 145678888887776666 6
Q ss_pred CCcEEEEEccccee--EEEecCCcceEEeeec-CCCeEEE-EeCCCcEEEEECCCCceeEEecc----cccccEEEEE-E
Q 019326 191 EEKVGIHQAEDAKL--LCELDGKKRILCAAPG-ENGVLFT-GGEDRSITAWDTNSGKVAYCIED----AHSARVKGIV-V 261 (343)
Q Consensus 191 ~~~i~~~d~~~~~~--~~~~~~~~~i~~~~~~-~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~----~h~~~v~~~~-~ 261 (343)
.+.|.++|..+.+. +..+........+.|+ +++++++ ...++.|.++|..+++.+..+.. .|.+. ... +
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~--g~~~~ 396 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGR--GANFV 396 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTT--CEEEE
T ss_pred CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcc--ceeeE
Confidence 79999999877543 3334444556677887 4566554 44678999999999988777762 23221 222 4
Q ss_pred EecCCCCCCCCCCeEEEEEc-CCCcEEEEeccCccccC--CCcccccccc-cceeEEEcCCCCceecccc
Q 019326 262 LTKNDGGSTAENPYLVASAS-SDGVICVWDVRMAIKEK--PLPLAEAKTN-SRLTCLAGSSTKSFKRPQI 327 (343)
Q Consensus 262 ~~~~~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~--~~~~~~~~~~-~~i~~~~~s~~~~~~~~~~ 327 (343)
+|++. ..++++. .++.|.++|..+..... ...+...... ..-..+..+|+++++....
T Consensus 397 ~p~~g--------~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 397 HPTFG--------PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp ETTTE--------EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred CCCCC--------cEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence 55432 1455553 56899999998732100 0111222221 2223467788887766544
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.70 E-value=1.6e-15 Score=129.52 Aligned_cols=226 Identities=10% Similarity=-0.072 Sum_probs=148.5
Q ss_pred EEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEE-------------------EEEeCCCCCCCCceEEE
Q 019326 47 TVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTS-------------------LAFYTPQNLSVPRNLFS 105 (343)
Q Consensus 47 ~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~-------------------l~~~~~~~~~~~~~l~s 105 (343)
.+.|+ ++.|+.++.++.|++||+.+++.......+ ...... +.|+|++ +.++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg-----~~~~~ 158 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVD-EEWKGYGTWVANSDCTKLVGIEILKRDWQPLT-----SWEKF 158 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC-TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC-----SHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecc-cccCCCCCEEEeccCCccccccccccccCCCC-----cceee
Confidence 36777 889999999999999999988766555544 332222 2456666 44443
Q ss_pred e-----eCCCeEEEEECCCcceeeeeeeccccEEEEEEec-CCCEEEEEeCC------CeEEEEEccCCceeEEEEc--C
Q 019326 106 T-----SADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH-SGKLALTVGRD------DCLAMVNLVRGRRSFYHKI--G 171 (343)
Q Consensus 106 ~-----~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~--~ 171 (343)
+ ..+..|++||+.+++..... .+...+..+.|+| +++.|+..+.+ ..|.+||+..++....... .
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~ 237 (396)
T 3c5m_A 159 AEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEG 237 (396)
T ss_dssp HHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTT
T ss_pred eeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCC
Confidence 3 35678999999887755444 4677889999999 78777766543 3688889876653322221 1
Q ss_pred CcceEEEEeCCCCEEEEE-eC-----CcEEEEEcccceeEEEecCCcceEEeeecC--CCeEEEEe--------------
Q 019326 172 KEASLIKFDGSGEKFFMV-TE-----EKVGIHQAEDAKLLCELDGKKRILCAAPGE--NGVLFTGG-------------- 229 (343)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~-~~-----~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~--~~~l~~~~-------------- 229 (343)
..+..+.|+|+++.++.. .+ +.|.+||+.+++......... .. ..|++ +++++.++
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~ 315 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYN 315 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------C
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccc
Confidence 246678999999987766 33 349999998876544333222 22 66664 45666543
Q ss_pred --CCCcEEEEECCCCceeEEecccccc-----------cEEEEEEEecCCCCCCCCCCeEEEEEc-CCCcEEEEecc
Q 019326 230 --EDRSITAWDTNSGKVAYCIEDAHSA-----------RVKGIVVLTKNDGGSTAENPYLVASAS-SDGVICVWDVR 292 (343)
Q Consensus 230 --~dg~i~i~d~~~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~~~~~~~~~~l~s~~-~dg~i~vwd~~ 292 (343)
.++.|++||+.+++.. .+. .+.. .+..+.|+|++. .|+.++ .++...+|.++
T Consensus 316 ~~~~~~i~~~d~~~~~~~-~l~-~~~~~~~~~~~~~~~~~~~~~~s~dg~---------~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 316 IENDPFLYVLNTKAKSAQ-KLC-KHSTSWDVLDGDRQITHPHPSFTPNDD---------GVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCCCCEEEEEETTTTBCC-EEE-ECCCCCCCBTTBSSTTCCCCEECTTSS---------EEEEEECTTSSCEEEEEE
T ss_pred cCCCCcEEEEecccCceE-Ecc-CCCCccccccccccCCCCCceEccCCC---------eEEEEecCCCCceEEEEE
Confidence 3478999999887643 344 3433 245677887776 666655 45666666554
No 193
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.69 E-value=2.3e-14 Score=119.50 Aligned_cols=274 Identities=12% Similarity=0.072 Sum_probs=182.1
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEee----------CCCeEEEEEcCCCeeee
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGG----------TDDTIHLYDLSTSSSLG 76 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~----------~dg~i~iwd~~~~~~~~ 76 (343)
++.|.++|..+ .+.+..+..-..+ . ++++ +++++++. .++.|.+||..+++.+.
T Consensus 58 ~~~V~ViD~~t------------~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~ 123 (386)
T 3sjl_D 58 VTQQFVIDGEA------------GRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTA 123 (386)
T ss_dssp SEEEEEEETTT------------TEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE
T ss_pred CCEEEEEECCC------------CeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEE
Confidence 57899999877 3334444433444 3 8888 77777765 36789999999999888
Q ss_pred EeccCC------CCCeEEEEEeCCCCCCCCceEEEeeC--CCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEE
Q 019326 77 AIHHHE------SSSVTSLAFYTPQNLSVPRNLFSTSA--DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTV 148 (343)
Q Consensus 77 ~~~~~~------~~~v~~l~~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~ 148 (343)
.+.... ......++|+|++ ++++++.. ++.|.++|+.+++.+.++.... . ...+....+.+++.
T Consensus 124 ~I~v~~g~r~~~g~~P~~~a~spDG-----k~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~ 195 (386)
T 3sjl_D 124 DIELPDAPRFLVGTYPWMTSLTPDG-----KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMH 195 (386)
T ss_dssp EEEETTCCCCCBSCCGGGEEECTTS-----SEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEE
T ss_pred EEECCCccccccCCCCceEEEcCCC-----CEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEE
Confidence 875320 1245679999999 77777764 6899999999999998886422 1 22233344677788
Q ss_pred eCCCeEEEEEccC-CceeEEEEcC-----Ccc-eEEEEe-CCCCEEEEEeCCcEEEEEcccce--eEEEec---------
Q 019326 149 GRDDCLAMVNLVR-GRRSFYHKIG-----KEA-SLIKFD-GSGEKFFMVTEEKVGIHQAEDAK--LLCELD--------- 209 (343)
Q Consensus 149 ~~d~~i~~wd~~~-~~~~~~~~~~-----~~~-~~~~~~-~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~--------- 209 (343)
+.||.+.+.++.+ ++........ .++ ....|. ++|++++...++.+.+.|..+.. ....+.
T Consensus 196 ~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~ 275 (386)
T 3sjl_D 196 CRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERAD 275 (386)
T ss_dssp ETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHT
T ss_pred CCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccc
Confidence 8899999999876 5542211110 111 113554 67777776688999999997654 333221
Q ss_pred --CCcceEEeeec-CCCeEEEEeC----------CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeE
Q 019326 210 --GKKRILCAAPG-ENGVLFTGGE----------DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYL 276 (343)
Q Consensus 210 --~~~~i~~~~~~-~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 276 (343)
.......+.++ +++.++.... .+.|.++|+.+++.+..+. -...+.+|++++++.. +
T Consensus 276 g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~--vg~~~~~lavs~D~~~--------~ 345 (386)
T 3sjl_D 276 GWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE--MGHEIDSINVSQDEKP--------L 345 (386)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE--EEEEECEEEECSSSSC--------E
T ss_pred cccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE--CCCCcceEEECCCCCe--------E
Confidence 01122234444 4555555432 2579999999999999998 3447889999998742 4
Q ss_pred EEE-EcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCC
Q 019326 277 VAS-ASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSST 319 (343)
Q Consensus 277 l~s-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 319 (343)
|++ ...++.|.++|..+++ .+......+..+.|.+++|
T Consensus 346 ly~tn~~~~~VsViD~~t~k-----~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 346 LYALSTGDKTLYIHDAESGE-----ELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEEEETTTTEEEEEETTTCC-----EEEEECCCCSSCCEEEECC
T ss_pred EEEEcCCCCeEEEEECCCCc-----EEEEecCCCCCceeEECCc
Confidence 554 5668999999999875 3334444455556666665
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.68 E-value=2e-12 Score=105.83 Aligned_cols=232 Identities=9% Similarity=0.013 Sum_probs=157.5
Q ss_pred CCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeee-eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEE
Q 019326 40 AHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSL-GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFD 116 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 116 (343)
.+...+.+++++ +..+++...++.|..||.. ++.. ..+... ...+..+++.+++ .++++...++.|..||
T Consensus 54 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~-~~~~~~i~~~~~g-----~l~v~~~~~~~i~~~d 126 (299)
T 2z2n_A 54 TPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNP-DSAPYGITEGPNG-----DIWFTEMNGNRIGRIT 126 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST-TCCEEEEEECTTS-----CEEEEETTTTEEEEEC
T ss_pred cccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCc-CCCceeeEECCCC-----CEEEEecCCceEEEEC
Confidence 345778999997 6666665667889999986 4322 122223 5678999999988 5666666788999999
Q ss_pred CCCcceeee-eeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE--cCCcceEEEEeCCCCEEEEE-eCC
Q 019326 117 ADPFVLLTS-VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK--IGKEASLIKFDGSGEKFFMV-TEE 192 (343)
Q Consensus 117 ~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~ 192 (343)
. +++.... ...+...+..+++.++++.+++...++.|..||. +++...... ....+..+++++++..+++. .++
T Consensus 127 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 204 (299)
T 2z2n_A 127 D-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGN 204 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTT
T ss_pred C-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCc
Confidence 8 4443322 2223457899999999988877777889999998 665443211 12457789999999877766 578
Q ss_pred cEEEEEcccceeEEE-ec-CCcceEEeeecCCCeEEEE-eCCCcEEEEECCCCceeEEec-ccccccEEEEEEEecCCCC
Q 019326 193 KVGIHQAEDAKLLCE-LD-GKKRILCAAPGENGVLFTG-GEDRSITAWDTNSGKVAYCIE-DAHSARVKGIVVLTKNDGG 268 (343)
Q Consensus 193 ~i~~~d~~~~~~~~~-~~-~~~~i~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~ 268 (343)
.+.+|+. +++.... .. ....+.++++++++.++.+ ..++.|..||. +++ +..+. ..+...+.++++ +++.
T Consensus 205 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~-- 278 (299)
T 2z2n_A 205 KIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGET-- 278 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSC--
T ss_pred eEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCC--
Confidence 9999999 6654332 22 3466888988754444444 46789999998 454 33332 145567899999 7665
Q ss_pred CCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 269 STAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 269 ~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
++++.+ .+.|..++.++.
T Consensus 279 -------l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 279 -------IWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp -------EEEEET-TTEEEEEEEC--
T ss_pred -------EEEEec-CCcEEEEEcCcc
Confidence 555544 567777787654
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.68 E-value=3.2e-13 Score=111.58 Aligned_cols=236 Identities=13% Similarity=0.086 Sum_probs=163.1
Q ss_pred CCCCCeEEEEec--CceEEE-------eeCCCeEEEEEcCCCeeeeEec----cCCCCCeEEEEEeCC-CCCCCCceEEE
Q 019326 40 AHLSPITTVAVS--GTAAAS-------GGTDDTIHLYDLSTSSSLGAIH----HHESSSVTSLAFYTP-QNLSVPRNLFS 105 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~----~~~~~~v~~l~~~~~-~~~~~~~~l~s 105 (343)
..-....+++|+ +.++++ +..++.|.+||..+++...... ++ ...+.++++.++ + .|+.
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~g------~l~v 87 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGY-GGIPAGCQCDRDAN------QLFV 87 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTE-ECCEEEEEECSSSS------EEEE
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCC-CCCCceEEEecCCC------cEEE
Confidence 344567889998 666666 5778999999988776543222 13 467899999998 6 4455
Q ss_pred eeCCCeEEEEECCCcceeee-eee----ccccEEEEEEecCCCEEEEEeCC---------------CeEEEEEccCCcee
Q 019326 106 TSADGFVSIFDADPFVLLTS-VKV----HKKGVNDLAVHHSGKLALTVGRD---------------DCLAMVNLVRGRRS 165 (343)
Q Consensus 106 ~~~dg~i~iwd~~~~~~~~~-~~~----~~~~v~~i~~~~~~~~l~~~~~d---------------~~i~~wd~~~~~~~ 165 (343)
++..+.|.+||.+ ++.... ... ....+.+++++++++++++...+ +.|..+|.. ++..
T Consensus 88 ~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (314)
T 1pjx_A 88 ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI 165 (314)
T ss_dssp EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE
T ss_pred EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE
Confidence 5545589999988 654332 221 12357899999999887776654 567777765 5544
Q ss_pred EEEEcCCcceEEEEe----CCCCEEEEE--eCCcEEEEEcc-ccee-----EEEecCC--cceEEeeecC-CCeEEEEeC
Q 019326 166 FYHKIGKEASLIKFD----GSGEKFFMV--TEEKVGIHQAE-DAKL-----LCELDGK--KRILCAAPGE-NGVLFTGGE 230 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~i~~~d~~-~~~~-----~~~~~~~--~~i~~~~~~~-~~~l~~~~~ 230 (343)
........+..++++ |+++.++++ .++.|.+|+.. +++. ...+... ..+..+++++ ++++++...
T Consensus 166 ~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 166 QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 333333556789999 999766665 57899999986 3432 2222222 5577888874 555555557
Q ss_pred CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEE-EEcCCCcEEEEeccCc
Q 019326 231 DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVA-SASSDGVICVWDVRMA 294 (343)
Q Consensus 231 dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~ 294 (343)
++.|.+||..+++.+..+. .+...+.++++++++. .|+ +...++.|..|++...
T Consensus 246 ~~~i~~~d~~~g~~~~~~~-~~~~~~~~i~~~~dg~---------~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIR-CPFEKPSNLHFKPQTK---------TIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TTEEEEECTTCBSCSEEEE-CSSSCEEEEEECTTSS---------EEEEEETTTTEEEEEECSSC
T ss_pred CCEEEEEcCCCCcEeEEEe-CCCCCceeEEECCCCC---------EEEEEeCCCCeEEEEeCCCC
Confidence 8899999998788777776 6667899999977765 454 5556789999998753
No 196
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.68 E-value=1e-13 Score=117.76 Aligned_cols=261 Identities=10% Similarity=0.098 Sum_probs=173.8
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCC-------CCCe-EEEEecCceEEEeeCCCeEEEEEcCCCe
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAH-------LSPI-TTVAVSGTAAASGGTDDTIHLYDLSTSS 73 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v-~~l~~~~~~l~s~~~dg~i~iwd~~~~~ 73 (343)
+|++++.++.|..||..+ ++..-.. .+... ...+ ..+...+..++.++.++.|..+|..+++
T Consensus 55 ~v~~~~~~g~v~a~d~~t-------G~~~W~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~ 124 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADD-------GKEIWSV---SLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGT 124 (376)
T ss_dssp EEEEECTTSEEEEEETTT-------CCEEEEE---ECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEcCCCeEEEEEccC-------Cceeeee---cCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCC
Confidence 467888889999999876 3222111 11110 2233 3344458888999999999999999999
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccE-----EEEEEecCCCEEEEE
Q 019326 74 SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGV-----NDLAVHHSGKLALTV 148 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v-----~~i~~~~~~~~l~~~ 148 (343)
.+...... .......... + ..++.++.++.|..+|..+++.+.......... ...... +..++.+
T Consensus 125 ~~W~~~~~-~~~~~~p~~~-~------~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g 194 (376)
T 3q7m_A 125 VAWQTKVA-GEALSRPVVS-D------GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVG 194 (376)
T ss_dssp EEEEEECS-SCCCSCCEEE-T------TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEEC
T ss_pred EEEEEeCC-CceEcCCEEE-C------CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEE
Confidence 98877654 2222222222 3 378888999999999999999888776432211 112222 3477888
Q ss_pred eCCCeEEEEEccCCceeEEEEcCCcceE--------EEEeC--CCCEEEEE-eCCcEEEEEcccceeEEEecCCcceEEe
Q 019326 149 GRDDCLAMVNLVRGRRSFYHKIGKEASL--------IKFDG--SGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRILCA 217 (343)
Q Consensus 149 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i~~~ 217 (343)
..++.+..+|..+++.........+... +...| .+..++++ .++.+..+|..+++.+....... ...+
T Consensus 195 ~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~ 273 (376)
T 3q7m_A 195 GDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDF 273 (376)
T ss_dssp CTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEE
T ss_pred cCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCc
Confidence 8899999999999998777665422100 00111 24555555 78999999999999887766433 3344
Q ss_pred eecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 218 APGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 218 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
.. .++.++.++.++.|..+|..+++.+..........+...... +. .|+.++.+|.|.++|..+++
T Consensus 274 ~~-~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~---------~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 274 IV-DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NG---------NLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EE-ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TT---------EEEEECTTSEEEEEETTTCC
T ss_pred eE-ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CC---------EEEEEeCCCeEEEEECCCCc
Confidence 44 466788888899999999999998877652222223333332 22 78999999999999999875
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.65 E-value=3.3e-14 Score=114.92 Aligned_cols=236 Identities=11% Similarity=-0.005 Sum_probs=160.1
Q ss_pred CeEEEEEeCCCCCCCCceEE-EeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc
Q 019326 85 SVTSLAFYTPQNLSVPRNLF-STSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR 163 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~ 163 (343)
...++++.+++ ++++ +...++.|.+||..+.........+...+.+++++++++++++.. ++.|..||.....
T Consensus 25 ~p~~i~~~~~g-----~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAG-----NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTC-----CEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCC-----CEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce
Confidence 78899999998 6666 446789999999866443222222334678899999998666655 8899999987654
Q ss_pred eeEEEEcC-CcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEEC
Q 019326 164 RSFYHKIG-KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDT 239 (343)
Q Consensus 164 ~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~ 239 (343)
........ ..+..++++++++.+++. .++.|.+|+..+........ ....+..+++++ ++++++...++.|.+||.
T Consensus 99 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 32221112 567889999999877776 67889999765544332221 234567788874 555555566789999998
Q ss_pred CCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCC
Q 019326 240 NSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSST 319 (343)
Q Consensus 240 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 319 (343)
.......... .+...+.++++.+++. ++++...++.|.+|+....... .........+.+++++++
T Consensus 179 ~~~~~~~~~~-~~~~~p~~i~~d~~g~---------l~v~~~~~~~v~~~~~~~~~~~----~~~~~~~~~p~~i~~~~~ 244 (270)
T 1rwi_B 179 ESNNQVVLPF-TDITAPWGIAVDEAGT---------VYVTEHNTNQVVKLLAGSTTST----VLPFTGLNTPLAVAVDSD 244 (270)
T ss_dssp TTCCEEECCC-SSCCSEEEEEECTTCC---------EEEEETTTSCEEEECTTCSCCE----ECCCCSCSCEEEEEECTT
T ss_pred CCCceEeecc-cCCCCceEEEECCCCC---------EEEEECCCCcEEEEcCCCCcce----eeccCCCCCceeEEECCC
Confidence 8765443333 3446788999988775 7888888899999998764211 111112245889999999
Q ss_pred CceeccccCCCCCCCccccCc
Q 019326 320 KSFKRPQIGDSAPKGEEKASM 340 (343)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~ 340 (343)
+.+.+....++.+...+..+.
T Consensus 245 g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 245 RTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CCEEEEEGGGTEEEEECCCGG
T ss_pred CCEEEEECCCCEEEEEcCCCc
Confidence 998888888887666555544
No 198
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.65 E-value=2.2e-13 Score=125.32 Aligned_cols=221 Identities=11% Similarity=0.029 Sum_probs=146.0
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeCCC-----eEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCe-----
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSADG-----FVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDC----- 153 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~----- 153 (343)
..+..++|+|++ ++|+.+..++ .|++||+.+++.+.....+ ..+..++|+|||+.|+.++.++.
T Consensus 125 ~~~~~~~~SPDg-----~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 125 VALRGYAFSEDG-----EYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp EEEEEEEECTTS-----SEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred EEEEEEEECCCC-----CEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccc
Confidence 468899999999 6777665533 8999999998876543322 23677999999999999888766
Q ss_pred -----------EEEEEccCCcee--EEEEc---CCcceEEEEeCCCCEEEEE-e-----CCcEEEEEccc------ce-e
Q 019326 154 -----------LAMVNLVRGRRS--FYHKI---GKEASLIKFDGSGEKFFMV-T-----EEKVGIHQAED------AK-L 204 (343)
Q Consensus 154 -----------i~~wd~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~-~-----~~~i~~~d~~~------~~-~ 204 (343)
|++|++.+++.. ..... ......+.|+|++++++.. . +..+.+||+.+ +. .
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 999999887632 22222 2335689999999998887 4 56899999987 42 2
Q ss_pred EEEec-CCcceEEeeecCCCeEEEEeC----CCcEEEEECCCCc--eeEEecccccc--cEEEEEEEecCCCCCCCCCCe
Q 019326 205 LCELD-GKKRILCAAPGENGVLFTGGE----DRSITAWDTNSGK--VAYCIEDAHSA--RVKGIVVLTKNDGGSTAENPY 275 (343)
Q Consensus 205 ~~~~~-~~~~i~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~--~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~~ 275 (343)
...+. +...+......+++.|+..+. .+.|.+||+.++. ....+. .|.. .+..+.+++.+.
T Consensus 279 ~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~--------- 348 (710)
T 2xdw_A 279 WVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV-PEHEKDVLEWVACVRSNF--------- 348 (710)
T ss_dssp CEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE-CCCSSCEEEEEEEETTTE---------
T ss_pred eEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc-CCCCCCeEEEEEEEcCCE---------
Confidence 33443 444444432235665554443 2369999998774 234554 4443 688888885544
Q ss_pred EEEEEcCCCc--EEEEeccCccccCCCcccccccccceeEEEcCCCCceec
Q 019326 276 LVASASSDGV--ICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKR 324 (343)
Q Consensus 276 ~l~s~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~ 324 (343)
++++...|+. |.+|++.++....... .. ...+..+++++++..++
T Consensus 349 lv~~~~~~g~~~l~~~~~~~g~~~~~l~---~~-~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 349 LVLCYLHDVKNTLQLHDLATGALLKIFP---LE-VGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEC---CC-SSEEEEEECCTTCSEEE
T ss_pred EEEEEEECCEEEEEEEECCCCCEEEecC---CC-CceEEEEecCCCCCEEE
Confidence 8888888885 5556665543211111 12 34577788888775443
No 199
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.64 E-value=1.4e-11 Score=100.86 Aligned_cols=264 Identities=13% Similarity=0.074 Sum_probs=179.2
Q ss_pred ecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeE-eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 38 YPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGA-IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 38 ~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
+......+.+++++ ++..++...++.|.+||.. ++.... +... ...+..+++.+++ .++++...++.|..
T Consensus 15 ~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~-~~~~~~i~~~~~g-----~l~v~~~~~~~v~~ 87 (300)
T 2qc5_A 15 LSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP-DAKVMCLIVSSLG-----DIWFTENGANKIGK 87 (300)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST-TCCEEEEEECTTS-----CEEEEETTTTEEEE
T ss_pred cCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC-CCcceeEEECCCC-----CEEEEecCCCeEEE
Confidence 34456788999998 6666665568999999988 554432 2223 4678999999888 56666666789999
Q ss_pred EECCCcceeeeee--eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE-E-cCCcceEEEEeCCCCEEEEE-
Q 019326 115 FDADPFVLLTSVK--VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH-K-IGKEASLIKFDGSGEKFFMV- 189 (343)
Q Consensus 115 wd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~- 189 (343)
||.. ++. ..+. .....+.++++.++++++++...++.|..+|.. ++..... . ....+..++++++++.+++.
T Consensus 88 ~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 88 LSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp ECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred ECCC-CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEec
Confidence 9987 444 2232 234578999999999888877778899999987 5543221 1 13567889999999966666
Q ss_pred eCCcEEEEEcccceeEEE-ec-CCcceEEeeecCC-CeEEEEeCCCcEEEEECCCCceeEE-ecccccccEEEEEEEecC
Q 019326 190 TEEKVGIHQAEDAKLLCE-LD-GKKRILCAAPGEN-GVLFTGGEDRSITAWDTNSGKVAYC-IEDAHSARVKGIVVLTKN 265 (343)
Q Consensus 190 ~~~~i~~~d~~~~~~~~~-~~-~~~~i~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~h~~~v~~~~~~~~~ 265 (343)
.++.|..++. +++.... .. ....+..++++++ ++.++....+.|.+||. +++.... +. .+...+.++++.+++
T Consensus 165 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~-~~~~~~~~i~~d~~g 241 (300)
T 2qc5_A 165 QNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIP-TPNARPHAITAGKNS 241 (300)
T ss_dssp TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECS-STTCCEEEEEECSTT
T ss_pred CCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECC-CCCCCceEEEECCCC
Confidence 5788999998 5554432 11 3345788888754 44444445678999998 4554433 33 355678899998887
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceecccc
Q 019326 266 DGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQI 327 (343)
Q Consensus 266 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~ 327 (343)
. ++++...++.|..||.. +... ..........+.+++.++++.+.+...
T Consensus 242 ~---------l~v~~~~~~~i~~~~~~-g~~~---~~~~~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 242 E---------IWFTEWGANQIGRITND-NTIQ---EYQLQTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp C---------EEEEETTTTEEEEECTT-SCEE---EEECCSTTCCCCCEEECTTSCEEEECS
T ss_pred C---------EEEeccCCCeEEEECCC-CcEE---EEECCccCCccceeEeCCCCCEEEEcc
Confidence 6 77777677999999984 3211 110111234578899999988766654
No 200
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.63 E-value=8.7e-14 Score=127.63 Aligned_cols=254 Identities=9% Similarity=-0.030 Sum_probs=159.3
Q ss_pred cCceEEEeeCCC-----eEEEEEcCCCeeeeEec------cCCCCCeEEEEEeCCCCCCCCceEE-----EeeCCCeEEE
Q 019326 51 SGTAAASGGTDD-----TIHLYDLSTSSSLGAIH------HHESSSVTSLAFYTPQNLSVPRNLF-----STSADGFVSI 114 (343)
Q Consensus 51 ~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~------~~~~~~v~~l~~~~~~~~~~~~~l~-----s~~~dg~i~i 114 (343)
.|++++....++ .|.+.+...++....+. +| ...+..++|+|++ ++|+ .|+.+..|++
T Consensus 78 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~-~~~~~~~~~SPDG-----~~la~~~~~~G~~~~~i~v 151 (695)
T 2bkl_A 78 RNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDG-TVSLGTWAVSWDG-----KKVAFAQKPNAADEAVLHV 151 (695)
T ss_dssp ETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSS-CEEEEEEEECTTS-----SEEEEEEEETTCSCCEEEE
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCC-CEEEEEEEECCCC-----CEEEEEECCCCCceEEEEE
Confidence 466666555433 24444444444333332 23 4468999999999 6777 4444578999
Q ss_pred EECCCccee-eeeeeccccEEEEEEecCCCEEEEEeCCCe-------------EEEEEccCCce--eEEEEc---CCcce
Q 019326 115 FDADPFVLL-TSVKVHKKGVNDLAVHHSGKLALTVGRDDC-------------LAMVNLVRGRR--SFYHKI---GKEAS 175 (343)
Q Consensus 115 wd~~~~~~~-~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~-------------i~~wd~~~~~~--~~~~~~---~~~~~ 175 (343)
||+.+++.+ .... .......++|+|||+.|+.++.|.. |++|++.+++. ...... ...+.
T Consensus 152 ~dl~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~ 230 (695)
T 2bkl_A 152 IDVDSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFL 230 (695)
T ss_dssp EETTTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEE
T ss_pred EECCCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEE
Confidence 999998765 2111 1111267899999999999988776 99999988762 222222 23577
Q ss_pred EEEEeCCCCEEEEE-eCC----cEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEe---CCCcEEEEECCCCce--e
Q 019326 176 LIKFDGSGEKFFMV-TEE----KVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGG---EDRSITAWDTNSGKV--A 245 (343)
Q Consensus 176 ~~~~~~~~~~~~~~-~~~----~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~--~ 245 (343)
.+.|+|+|++++.. .++ .+.+++..+++......+...+....++++++++... .++.|.+||+.+++. .
T Consensus 231 ~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 310 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASW 310 (695)
T ss_dssp EEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGC
T ss_pred EEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCC
Confidence 89999999998887 554 5667766555544444455455555555666444433 258899999987753 2
Q ss_pred EEecccc-cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC-ccccCCCcccccccccceeEEEcCCCCcee
Q 019326 246 YCIEDAH-SARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM-AIKEKPLPLAEAKTNSRLTCLAGSSTKSFK 323 (343)
Q Consensus 246 ~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~ 323 (343)
..+...+ ...+..++++ ++. ++++...|+..+||.+.. +...... .......+..+++++++..+
T Consensus 311 ~~l~~~~~~~~l~~~~~~-~~~---------lv~~~~~dg~~~l~~~~~~g~~~~~l---~~~~~~~v~~~~~s~d~~~l 377 (695)
T 2bkl_A 311 KEIVPEDSSASLLSVSIV-GGH---------LSLEYLKDATSEVRVATLKGKPVRTV---QLPGVGAASNLMGLEDLDDA 377 (695)
T ss_dssp EEEECCCSSCEEEEEEEE-TTE---------EEEEEEETTEEEEEEEETTCCEEEEC---CCSSSSEECCCBSCTTCSEE
T ss_pred eEEecCCCCCeEEEEEEE-CCE---------EEEEEEECCEEEEEEEeCCCCeeEEe---cCCCCeEEEEeecCCCCCEE
Confidence 3343133 4567888887 433 888999999999887652 2211111 11223346667777766544
Q ss_pred c
Q 019326 324 R 324 (343)
Q Consensus 324 ~ 324 (343)
+
T Consensus 378 ~ 378 (695)
T 2bkl_A 378 Y 378 (695)
T ss_dssp E
T ss_pred E
Confidence 4
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.62 E-value=3.1e-12 Score=107.93 Aligned_cols=258 Identities=9% Similarity=0.007 Sum_probs=166.9
Q ss_pred CceEEEeeC--CC---eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee----------CCCeEEEEE
Q 019326 52 GTAAASGGT--DD---TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS----------ADGFVSIFD 116 (343)
Q Consensus 52 ~~~l~s~~~--dg---~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~----------~dg~i~iwd 116 (343)
+.++++... .. .|.++|..+++.+..+... ..+ .++++|++ ++++.+. .++.|.+||
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g-~~p--~i~~spDg-----~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG-FLP--NPVAAHSG-----SEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC-CCC--CeEECCCC-----CEEEEEeccccccccCCCCCeEEEEE
Confidence 555555543 22 8899999999998888765 444 99999999 6777775 367899999
Q ss_pred CCCcceeeeeeec-------cccEEEEEEecCCCEEEEEeC--CCeEEEEEccCCceeEE-EEcCCcceEEEEeCCCCEE
Q 019326 117 ADPFVLLTSVKVH-------KKGVNDLAVHHSGKLALTVGR--DDCLAMVNLVRGRRSFY-HKIGKEASLIKFDGSGEKF 186 (343)
Q Consensus 117 ~~~~~~~~~~~~~-------~~~v~~i~~~~~~~~l~~~~~--d~~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 186 (343)
..+.+.+..+... ......++|+|+|++|+++.. ++.|.++| .+++.+.. ...+.. +.+.|.+...
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~ 179 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPST 179 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCce
Confidence 9988888776532 123457999999999998874 57899999 99887666 554433 4455655433
Q ss_pred -EEE-eCCcEEEEEcccceeEEEec------CCcce-EEeeec-CCCeEEEEeCCCcEEEEECCCCc--eeEEecccc--
Q 019326 187 -FMV-TEEKVGIHQAEDAKLLCELD------GKKRI-LCAAPG-ENGVLFTGGEDRSITAWDTNSGK--VAYCIEDAH-- 252 (343)
Q Consensus 187 -~~~-~~~~i~~~d~~~~~~~~~~~------~~~~i-~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~h-- 252 (343)
++. .++.+.+++. +++...... ...++ ....+. +++.++..+..+.+.+.|+.... .+..+. ..
T Consensus 180 ~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~-~~~~ 257 (373)
T 2mad_H 180 FYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPID-ALSG 257 (373)
T ss_pred EEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeee-ecCC
Confidence 333 8999999999 777663322 11221 112222 23333333367899999997553 222222 11
Q ss_pred --------cccEEEEEEEecCCCCCCCCCCeEEEEEcC----------CCcEEEEeccCccccCCCcccccccccceeEE
Q 019326 253 --------SARVKGIVVLTKNDGGSTAENPYLVASASS----------DGVICVWDVRMAIKEKPLPLAEAKTNSRLTCL 314 (343)
Q Consensus 253 --------~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~ 314 (343)
......+.+++++. .++.+.. ++.|.+.|+.+.+... .+.......++
T Consensus 258 ~~~~~~~~p~g~~~~~~s~d~~---------~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~-----~i~~g~~p~~i 323 (373)
T 2mad_H 258 GRKADTWRPGGWQQVAYLKSSD---------GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSS-----QISLGHDVDAI 323 (373)
T ss_pred cccccceecCceEeEEECCCCC---------EEEEEeccCCcccccCCCCeEEEEECCCCEEEE-----EEECCCCcCeE
Confidence 12233466666655 5555432 3579999998875333 33444568899
Q ss_pred EcCCCCc-eecccc-CCCCCCCccc
Q 019326 315 AGSSTKS-FKRPQI-GDSAPKGEEK 337 (343)
Q Consensus 315 ~~s~~~~-~~~~~~-~~~~~~~~~~ 337 (343)
++++|++ +++... .++.+...+.
T Consensus 324 ~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 324 SVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred EECCCCCeEEEEEcCCCCeEEEEEC
Confidence 9999998 555544 4555544443
No 202
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.61 E-value=6.4e-13 Score=112.76 Aligned_cols=254 Identities=10% Similarity=0.135 Sum_probs=167.5
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHH 81 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 81 (343)
++++++.++.|..+|..+ ++.. ................+..++.++.++.|..+|..+++.+..+...
T Consensus 105 ~v~v~~~~g~l~a~d~~t-------G~~~-----W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~ 172 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSD-------GTVA-----WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLD 172 (376)
T ss_dssp EEEEEETTSEEEEEETTT-------CCEE-----EEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEEcCCCEEEEEECCC-------CCEE-----EEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCC
Confidence 467888899999999876 3221 1222221111122334778888999999999999999988887654
Q ss_pred CCCCe-----EEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecccc-------EEEEEEec--CCCEEEE
Q 019326 82 ESSSV-----TSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKG-------VNDLAVHH--SGKLALT 147 (343)
Q Consensus 82 ~~~~v-----~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-------v~~i~~~~--~~~~l~~ 147 (343)
.... ...... + ..++.++.++.|..+|..+++.+......... +..+...| .+..++.
T Consensus 173 -~~~~~~~~~~~~~~~-~------~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~ 244 (376)
T 3q7m_A 173 -MPSLSLRGESAPTTA-F------GAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFA 244 (376)
T ss_dssp -C-----CCCCCCEEE-T------TEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEE
T ss_pred -CCceeecCCCCcEEE-C------CEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEE
Confidence 2111 122222 2 36888899999999999999888776532110 00011111 2457788
Q ss_pred EeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-C-CcceEEeeecCCCe
Q 019326 148 VGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-G-KKRILCAAPGENGV 224 (343)
Q Consensus 148 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~-~~~i~~~~~~~~~~ 224 (343)
++.++.+..+|.++++......... ...+.. ++..++++ .++.+..+|..+++.+.... . ...+..... .++.
T Consensus 245 ~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~-~~~~ 320 (376)
T 3q7m_A 245 LAYNGNLTALDLRSGQIMWKRELGS-VNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL-YNGN 320 (376)
T ss_dssp ECTTSCEEEEETTTCCEEEEECCCC-EEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE-ETTE
T ss_pred EecCcEEEEEECCCCcEEeeccCCC-CCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE-ECCE
Confidence 8889999999999999876655433 233333 35555555 78899999999999887765 2 222222233 3578
Q ss_pred EEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 225 LFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 225 l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
++.++.+|.|+++|..+++.+.... .....+.......++ .|+.++.||.|..|+
T Consensus 321 l~v~~~~g~l~~~d~~tG~~~~~~~-~~~~~~~~~~~~~~~----------~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 321 LVVGDSEGYLHWINVEDGRFVAQQK-VDSSGFQTEPVAADG----------KLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEE-CCTTCBCSCCEEETT----------EEEEEBTTSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEe-cCCCcceeCCEEECC----------EEEEEeCCCEEEEEe
Confidence 8889999999999999999988877 323333322222233 788999999999987
No 203
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.61 E-value=7.6e-13 Score=120.57 Aligned_cols=266 Identities=13% Similarity=0.135 Sum_probs=173.6
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCC----------Ce-EEEEecCceEEEeeCCCeEEEEEcC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLS----------PI-TTVAVSGTAAASGGTDDTIHLYDLS 70 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~----------~v-~~l~~~~~~l~s~~~dg~i~iwd~~ 70 (343)
.|++++.++.|+.+|..+ ++.. .++..+.. .+ ..+++.+..+++++.|+.|..+|..
T Consensus 72 ~vyv~~~~~~v~AlD~~t-------G~~~-----W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~ 139 (689)
T 1yiq_A 72 VMYTTGPFSVVYALDARD-------GRLI-----WKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAK 139 (689)
T ss_dssp EEEEECGGGCEEEEETTT-------CCEE-----EEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETT
T ss_pred EEEEEcCCCeEEEEECCC-------Ccee-----EEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECC
Confidence 467788889999999877 3222 22211110 11 1234457789999999999999999
Q ss_pred CCeeeeEeccC-CCCCeEEEEEeC---CCCCCCCceEEEee------CCCeEEEEECCCcceeeeeeecc----------
Q 019326 71 TSSSLGAIHHH-ESSSVTSLAFYT---PQNLSVPRNLFSTS------ADGFVSIFDADPFVLLTSVKVHK---------- 130 (343)
Q Consensus 71 ~~~~~~~~~~~-~~~~v~~l~~~~---~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~---------- 130 (343)
+|+.+..+... +......+...| ++ .++.++ .+|.|+.||.++++.+..+....
T Consensus 140 TG~~~W~~~~~~~~~~~~~~~~sP~v~~g------~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~ 213 (689)
T 1yiq_A 140 TGQRAWSVDTRADHKRSYTITGAPRVVNG------KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGK 213 (689)
T ss_dssp TCCEEEEEECCSCTTSCCBCCSCCEEETT------EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSH
T ss_pred CCCEeeeecCcCCCCCCccccCCcEEECC------EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccc
Confidence 99998887642 111111111111 33 455554 37899999999999988775210
Q ss_pred ---------------------ccEEEEEEecCCCEEEEEeCCCe-------------------EEEEEccCCceeEEEEc
Q 019326 131 ---------------------KGVNDLAVHHSGKLALTVGRDDC-------------------LAMVNLVRGRRSFYHKI 170 (343)
Q Consensus 131 ---------------------~~v~~i~~~~~~~~l~~~~~d~~-------------------i~~wd~~~~~~~~~~~~ 170 (343)
.....++++|+...++.+..++. |..+|.++|+.+.....
T Consensus 214 ~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~ 293 (689)
T 1yiq_A 214 GMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQT 293 (689)
T ss_dssp HHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEES
T ss_pred cccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeec
Confidence 01125788898889999888764 99999999998877664
Q ss_pred C-C---------cceEEEEeCCCC---EEEEE-eCCcEEEEEcccceeEEEecCCc--c---------------------
Q 019326 171 G-K---------EASLIKFDGSGE---KFFMV-TEEKVGIHQAEDAKLLCELDGKK--R--------------------- 213 (343)
Q Consensus 171 ~-~---------~~~~~~~~~~~~---~~~~~-~~~~i~~~d~~~~~~~~~~~~~~--~--------------------- 213 (343)
. + ++.......+++ .++.+ .+|.+.++|..+++.+...+... .
T Consensus 294 ~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~ 373 (689)
T 1yiq_A 294 TPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYW 373 (689)
T ss_dssp STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTT
T ss_pred CCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhcccc
Confidence 2 1 112222233554 56666 78999999999999875433110 0
Q ss_pred -----------------eEEeeecC-CCeEEEEeC---------------------------------------------
Q 019326 214 -----------------ILCAAPGE-NGVLFTGGE--------------------------------------------- 230 (343)
Q Consensus 214 -----------------i~~~~~~~-~~~l~~~~~--------------------------------------------- 230 (343)
...+++++ .+++++...
T Consensus 374 ~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~ 453 (689)
T 1yiq_A 374 KNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSW 453 (689)
T ss_dssp TSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTC
T ss_pred CCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCc
Confidence 00134443 345554421
Q ss_pred CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc
Q 019326 231 DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK 296 (343)
Q Consensus 231 dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 296 (343)
+|.|+.||+.+++.+.++. .+ .++..-.+...+. +++.++.||.|+.||.++++.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~-~~-~~~~~g~~~tagg---------lvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVP-YV-TIFNGGTLSTAGN---------LVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp EEEEEEEETTTTEEEEEEE-ES-SSCCCCEEEETTT---------EEEEECTTSEEEEEETTTCCE
T ss_pred ceeEEEEECCCCCeEeEcc-CC-CCccCccceECCC---------EEEEECCCCcEEEEECCCCcc
Confidence 3789999999999999887 33 3344334555555 899999999999999999863
No 204
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.61 E-value=3.9e-13 Score=122.24 Aligned_cols=267 Identities=11% Similarity=0.130 Sum_probs=180.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCC-----------CeEEEEecCceEEEeeCCCeEEEEEcC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLS-----------PITTVAVSGTAAASGGTDDTIHLYDLS 70 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~l~~~~~~l~s~~~dg~i~iwd~~ 70 (343)
.|++++.++.|+.+|..+ ++. +.++..... .-..+++.+..++.++.|+.|..+|..
T Consensus 79 ~vyv~~~~~~v~AlD~~t-------G~~-----~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~ 146 (677)
T 1kb0_A 79 IMYVSASWSVVHAIDTRT-------GNR-----IWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAA 146 (677)
T ss_dssp EEEEECGGGCEEEEETTT-------TEE-----EEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETT
T ss_pred EEEEECCCCeEEEEECCC-------CcE-----EEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECC
Confidence 466777888999999876 322 222221110 112344567889999999999999999
Q ss_pred CCeeeeEeccC-CC---CCeEEEEEeCCCCCCCCceEEEeeC------CCeEEEEECCCcceeeeeeecccc--------
Q 019326 71 TSSSLGAIHHH-ES---SSVTSLAFYTPQNLSVPRNLFSTSA------DGFVSIFDADPFVLLTSVKVHKKG-------- 132 (343)
Q Consensus 71 ~~~~~~~~~~~-~~---~~v~~l~~~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~-------- 132 (343)
+|+.+..+... .. ..+.+--...++ .++.++. ++.|+.+|..+++.+..+......
T Consensus 147 tG~~~W~~~~~~~~~~~~~~~~~p~v~~~------~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~ 220 (677)
T 1kb0_A 147 TGKEVWHQNTFEGQKGSLTITGAPRVFKG------KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDE 220 (677)
T ss_dssp TCCEEEEEETTTTCCSSCBCCSCCEEETT------EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSH
T ss_pred CCCEEeeecCCcCcCcCcccccCcEEECC------EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccc
Confidence 99999888643 10 112111111133 5555553 799999999999998877642211
Q ss_pred ------------------------EEEEEEecCCCEEEEEeCCC-------------------eEEEEEccCCceeEEEE
Q 019326 133 ------------------------VNDLAVHHSGKLALTVGRDD-------------------CLAMVNLVRGRRSFYHK 169 (343)
Q Consensus 133 ------------------------v~~i~~~~~~~~l~~~~~d~-------------------~i~~wd~~~~~~~~~~~ 169 (343)
...++++|++..++.+..++ .|..+|.++++......
T Consensus 221 ~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~ 300 (677)
T 1kb0_A 221 SMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQ 300 (677)
T ss_dssp HHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE
T ss_pred ccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEe
Confidence 13578889888888887664 59999999999887766
Q ss_pred cCC----------cceEEEEeCCC---CEEEEE-eCCcEEEEEcccceeEEEecCC--c----------ce---------
Q 019326 170 IGK----------EASLIKFDGSG---EKFFMV-TEEKVGIHQAEDAKLLCELDGK--K----------RI--------- 214 (343)
Q Consensus 170 ~~~----------~~~~~~~~~~~---~~~~~~-~~~~i~~~d~~~~~~~~~~~~~--~----------~i--------- 214 (343)
... .+..+....+| ..++.+ .++.+.++|..+++.+..+... . ++
T Consensus 301 ~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~ 380 (677)
T 1kb0_A 301 ETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGS 380 (677)
T ss_dssp SSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTT
T ss_pred cCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCC
Confidence 431 23334444466 556666 8999999999999988766521 0 01
Q ss_pred ---------------EEeeecC-CCeEEEEeC-------------------------------------------CCcEE
Q 019326 215 ---------------LCAAPGE-NGVLFTGGE-------------------------------------------DRSIT 235 (343)
Q Consensus 215 ---------------~~~~~~~-~~~l~~~~~-------------------------------------------dg~i~ 235 (343)
..+++++ .+++++... .|.|.
T Consensus 381 ~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~ 460 (677)
T 1kb0_A 381 KPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLL 460 (677)
T ss_dssp SCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEE
T ss_pred CccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEE
Confidence 0345553 456665432 27899
Q ss_pred EEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcccc
Q 019326 236 AWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKE 297 (343)
Q Consensus 236 i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 297 (343)
.||+.+++.+.++. +..++.+..+...+. +++.++.||.+++||.++++..
T Consensus 461 A~D~~tG~~~W~~~--~~~~~~~g~~~~~g~---------~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 461 AWDPVAQKAAWSVE--HVSPWNGGTLTTAGN---------VVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp EEETTTTEEEEEEE--ESSSCCCCEEEETTT---------EEEEECTTSEEEEEETTTCCEE
T ss_pred EEeCCCCcEEeecC--CCCCCcCcceEeCCC---------EEEEECCCCcEEEEECCCCcee
Confidence 99999999998887 445555555666665 8888999999999999998643
No 205
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.60 E-value=9.9e-13 Score=119.57 Aligned_cols=248 Identities=11% Similarity=0.113 Sum_probs=171.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCC-C----CCeEE-EEecCceEEEeeC------CCeEEEEEc
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAH-L----SPITT-VAVSGTAAASGGT------DDTIHLYDL 69 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h-~----~~v~~-l~~~~~~l~s~~~------dg~i~iwd~ 69 (343)
+|++++.|+.|..+|..+ ++.. ..+..+ . ..+.+ ....+..++.++. +|.|+.+|.
T Consensus 130 ~v~v~~~dg~l~alD~~t-------G~~~-----W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~ 197 (677)
T 1kb0_A 130 KVYVGAWDGRLIALDAAT-------GKEV-----WHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDA 197 (677)
T ss_dssp EEEEECTTSEEEEEETTT-------CCEE-----EEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEET
T ss_pred EEEEEcCCCEEEEEECCC-------CCEE-----eeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEEC
Confidence 578888999999999987 3322 222222 1 11211 1223566666654 799999999
Q ss_pred CCCeeeeEeccCCCC-------------------------------CeEEEEEeCCCCCCCCceEEEeeCCC--------
Q 019326 70 STSSSLGAIHHHESS-------------------------------SVTSLAFYTPQNLSVPRNLFSTSADG-------- 110 (343)
Q Consensus 70 ~~~~~~~~~~~~~~~-------------------------------~v~~l~~~~~~~~~~~~~l~s~~~dg-------- 110 (343)
.+|+.+..+...... ....+++.+++ ..++.+..++
T Consensus 198 ~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~-----~~vy~~~~~~~~w~~~~~ 272 (677)
T 1kb0_A 198 ETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL-----NTMYVGTGNGSPWSHKVR 272 (677)
T ss_dssp TTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT-----TEEEEECCCEESSCHHHH
T ss_pred CCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC-----CEEEEECCCCccccCCCC
Confidence 999999887643111 11356788877 6777777664
Q ss_pred -----------eEEEEECCCcceeeeeeecc---------ccEEEEEEecCC---CEEEEEeCCCeEEEEEccCCceeEE
Q 019326 111 -----------FVSIFDADPFVLLTSVKVHK---------KGVNDLAVHHSG---KLALTVGRDDCLAMVNLVRGRRSFY 167 (343)
Q Consensus 111 -----------~i~iwd~~~~~~~~~~~~~~---------~~v~~i~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~ 167 (343)
.|..+|.++++.+..++... .....+....+| ..++.++.+|.++++|.++++.+..
T Consensus 273 ~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~ 352 (677)
T 1kb0_A 273 SPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISA 352 (677)
T ss_dssp STTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred CccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecc
Confidence 59999999999988876421 122223444467 6899999999999999999998766
Q ss_pred EEcCCc------------c------------------------eEEEEeCCCCEEEEE-eC-------------------
Q 019326 168 HKIGKE------------A------------------------SLIKFDGSGEKFFMV-TE------------------- 191 (343)
Q Consensus 168 ~~~~~~------------~------------------------~~~~~~~~~~~~~~~-~~------------------- 191 (343)
...... + ..++++|+...+++. .+
T Consensus 353 ~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~ 432 (677)
T 1kb0_A 353 KNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPG 432 (677)
T ss_dssp EESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTT
T ss_pred ccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccc
Confidence 553210 0 146889988888775 31
Q ss_pred ------------------------CcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeE
Q 019326 192 ------------------------EKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAY 246 (343)
Q Consensus 192 ------------------------~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~ 246 (343)
+.|..||+.+++.+.++.+..++....+. .+++++.++.||.+++||.++++.+.
T Consensus 433 ~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 433 KPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp STTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceee
Confidence 67999999999999988865554443333 67788889999999999999999999
Q ss_pred EecccccccEEEEEEEecCC
Q 019326 247 CIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 247 ~~~~~h~~~v~~~~~~~~~~ 266 (343)
++..++...-.-+.+..++.
T Consensus 513 ~~~~~~~~~~~p~~y~~~G~ 532 (677)
T 1kb0_A 513 EAPTGTGVVAAPSTYMVDGR 532 (677)
T ss_dssp EEECSSCCCSCCEEEEETTE
T ss_pred eeeCCCCcccCCEEEEeCCE
Confidence 98844433334455556554
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.60 E-value=3.2e-11 Score=101.78 Aligned_cols=253 Identities=12% Similarity=0.029 Sum_probs=168.0
Q ss_pred eEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEee----------CCCeEEEEEcCCCeeeeEe
Q 019326 11 FIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGG----------TDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 11 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~----------~dg~i~iwd~~~~~~~~~~ 78 (343)
.|.+||..+ .+.+..++.-..+ .++++ +++++++. .++.|.+||..+.+.+..+
T Consensus 48 ~v~v~D~~t------------~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i 113 (373)
T 2mad_H 48 QQWVLDAGS------------GSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADI 113 (373)
T ss_pred EEEEEECCC------------CeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEE
Confidence 788999876 2233444433344 78888 78888875 3678999999998887766
Q ss_pred ccC-C-----CCCeEEEEEeCCCCCCCCceEEEeeC--CCeEEEEECCCcceeee-eeeccccEEEEEEecCC-CEEEEE
Q 019326 79 HHH-E-----SSSVTSLAFYTPQNLSVPRNLFSTSA--DGFVSIFDADPFVLLTS-VKVHKKGVNDLAVHHSG-KLALTV 148 (343)
Q Consensus 79 ~~~-~-----~~~v~~l~~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~~~~-~~l~~~ 148 (343)
... . ......+.|+|++ ++|+++.. ++.|.++| .+++.+.. +... . ++.+.|++ +.+++.
T Consensus 114 ~~~~~~~~~~g~~p~~~~~spDG-----~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~ 183 (373)
T 2mad_H 114 ELPDAPRFDVGPYSWMNANTPNN-----ADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLL 183 (373)
T ss_pred ECCCccccccCCCccceEECCCC-----CEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEE
Confidence 431 0 1234589999999 78887764 57899999 99988877 5432 2 24455554 566777
Q ss_pred eCCCeEEEEEccCCceeEEEE-----cC-Ccc-eEEEEeCCCCEEEE-EeCCcEEEEEcccce--eEEEecC--------
Q 019326 149 GRDDCLAMVNLVRGRRSFYHK-----IG-KEA-SLIKFDGSGEKFFM-VTEEKVGIHQAEDAK--LLCELDG-------- 210 (343)
Q Consensus 149 ~~d~~i~~wd~~~~~~~~~~~-----~~-~~~-~~~~~~~~~~~~~~-~~~~~i~~~d~~~~~--~~~~~~~-------- 210 (343)
+.||.+.++|. +++...... .. .++ ....+.+++..++. ...+.+.+.|+.... ....+..
T Consensus 184 ~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~ 262 (373)
T 2mad_H 184 CAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKAD 262 (373)
T ss_pred cCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccccc
Confidence 78999999999 777653322 11 111 22345565554444 477889999986542 2232221
Q ss_pred ---CcceEEeeec-CCCeEEEEeC----------CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeE
Q 019326 211 ---KKRILCAAPG-ENGVLFTGGE----------DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYL 276 (343)
Q Consensus 211 ---~~~i~~~~~~-~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 276 (343)
+.....+.++ +++.+++... ++.|.++|..+++.+.++. -.....+++|+++++. +
T Consensus 263 ~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~--~g~~p~~i~~s~Dg~~--------~ 332 (373)
T 2mad_H 263 TWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS--LGHDVDAISVAQDGGP--------D 332 (373)
T ss_pred ceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE--CCCCcCeEEECCCCCe--------E
Confidence 1223335566 4455555432 3579999999999999987 3446889999988751 4
Q ss_pred EEEEc-CCCcEEEEeccCccccC
Q 019326 277 VASAS-SDGVICVWDVRMAIKEK 298 (343)
Q Consensus 277 l~s~~-~dg~i~vwd~~~~~~~~ 298 (343)
++++. .++.|.++|+.+.+...
T Consensus 333 l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 333 LYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred EEEEcCCCCeEEEEECCCCCEEe
Confidence 66666 58999999999876443
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.60 E-value=2.4e-13 Score=125.64 Aligned_cols=238 Identities=13% Similarity=0.093 Sum_probs=156.1
Q ss_pred CCCCeEEEEec--CceEEEeeCC-----CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC---
Q 019326 41 HLSPITTVAVS--GTAAASGGTD-----DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG--- 110 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg--- 110 (343)
|...+..++|+ |++|+.+..+ ..|++||+.+++.+.... + ...+..++|+|+ . .|+.++.++
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~-~~~~~~~~wspD-~-----~l~~~~~~~~~~ 232 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-K-WVKFSGLAWLGN-D-----ALLYSRFAEPKE 232 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-E-EEESCCCEESTT-S-----EEEEEECCCC--
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-C-CceeccEEEECC-C-----EEEEEEecCccc
Confidence 44468889998 7888776543 469999999998765422 2 222457899998 4 555555544
Q ss_pred -----------eEEEEECCCcce--eeeeee--ccccEEEEEEecCCCEEEEEeCCC-----eEEEEEccCC--c-eeEE
Q 019326 111 -----------FVSIFDADPFVL--LTSVKV--HKKGVNDLAVHHSGKLALTVGRDD-----CLAMVNLVRG--R-RSFY 167 (343)
Q Consensus 111 -----------~i~iwd~~~~~~--~~~~~~--~~~~v~~i~~~~~~~~l~~~~~d~-----~i~~wd~~~~--~-~~~~ 167 (343)
.|++|++.+++. ...+.. +...+..+.|+|+|++|+..+.++ .|++||+.++ + ....
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l 312 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTAL 312 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEE
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEe
Confidence 389999977652 222222 233588999999999888877544 8999999877 4 3333
Q ss_pred EEcCCcceEEEEeCCCCEEEEE-e----CCcEEEEEcccc--eeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEEC
Q 019326 168 HKIGKEASLIKFDGSGEKFFMV-T----EEKVGIHQAEDA--KLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDT 239 (343)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~-~----~~~i~~~d~~~~--~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~ 239 (343)
.......... ++|++..++.. . +..|.+||+.++ .....+. +...+..+.+.++.++++...|+..+||.+
T Consensus 313 ~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 313 IPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEE
T ss_pred cCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEE
Confidence 2222333333 45888888777 3 345999998874 3333334 334466777776678888888988777755
Q ss_pred C-CCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEE---cCCCcEEEEeccCcc
Q 019326 240 N-SGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASA---SSDGVICVWDVRMAI 295 (343)
Q Consensus 240 ~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~---~~dg~i~vwd~~~~~ 295 (343)
. +++....+...+...+..+.+++++.. ++++. ...++|++||+.++.
T Consensus 392 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~--------l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGIGSASGLSGRPGDRH--------AYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp ETTSCEEEECBCSSSCEEEEEECCBTCSC--------EEEEEEETTEEEEEEEEETTTTE
T ss_pred eCCCCceeeccCCCCeEEEEeecCCCCCE--------EEEEEcCCCCCCEEEEEECCCCc
Confidence 4 466666666234677888888887651 33332 345789999998764
No 208
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.60 E-value=1.7e-12 Score=118.27 Aligned_cols=253 Identities=11% Similarity=0.090 Sum_probs=167.5
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEE-EEecCceEEEee------CCCeEEEEEcCCCee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITT-VAVSGTAAASGG------TDDTIHLYDLSTSSS 74 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~~~~~l~s~~------~dg~i~iwd~~~~~~ 74 (343)
+|++++.|+.|..+|..+ ++..-......-......+.+ -...+..++.+. .+|.|+.||..+|+.
T Consensus 123 ~v~v~~~dg~l~AlDa~T-------G~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 123 KVYVGVLDGRLEAIDAKT-------GQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp EEEEECTTSEEEEEETTT-------CCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred EEEEEccCCEEEEEECCC-------CCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 478888999999999987 333221111000000011111 112245555554 378999999999999
Q ss_pred eeEeccCC-C-----------------------------CCeEEEEEeCCCCCCCCceEEEeeCCCe-------------
Q 019326 75 LGAIHHHE-S-----------------------------SSVTSLAFYTPQNLSVPRNLFSTSADGF------------- 111 (343)
Q Consensus 75 ~~~~~~~~-~-----------------------------~~v~~l~~~~~~~~~~~~~l~s~~~dg~------------- 111 (343)
+..+.... . ..-..+++.|.. .+++.+..++.
T Consensus 196 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~-----~~vy~~~~~g~~w~~~~~~~~~gd 270 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL-----NLLYIGVGNGSLWDPKWRSQAKGD 270 (689)
T ss_dssp EEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT-----TEEEEECCCEESSCHHHHHTTCSC
T ss_pred EEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC-----CEEEEeCCCCCccccCCCCCCCCC
Confidence 88875310 0 011257788877 68888887764
Q ss_pred ------EEEEECCCcceeeeeee--cc-------ccEEEEEEecCCC---EEEEEeCCCeEEEEEccCCceeEEEEcCCc
Q 019326 112 ------VSIFDADPFVLLTSVKV--HK-------KGVNDLAVHHSGK---LALTVGRDDCLAMVNLVRGRRSFYHKIGKE 173 (343)
Q Consensus 112 ------i~iwd~~~~~~~~~~~~--~~-------~~v~~i~~~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 173 (343)
|..+|.++++.+..++. |. .++.......+|+ .++.++.+|.++++|.++++.+........
T Consensus 271 ~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~ 350 (689)
T 1yiq_A 271 NLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQ 350 (689)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCC
T ss_pred ceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccc
Confidence 99999999999988864 21 1222223333554 788999999999999999998754332210
Q ss_pred ----------------------------------------ceEEEEeCCCCEEEEE-e----------------------
Q 019326 174 ----------------------------------------ASLIKFDGSGEKFFMV-T---------------------- 190 (343)
Q Consensus 174 ----------------------------------------~~~~~~~~~~~~~~~~-~---------------------- 190 (343)
-..++++|+...+++. .
T Consensus 351 ~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (689)
T 1yiq_A 351 SWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMY 430 (689)
T ss_dssp SSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSC
T ss_pred ccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccccccccccccc
Confidence 1126888888877765 2
Q ss_pred -----------------------CCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeE
Q 019326 191 -----------------------EEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAY 246 (343)
Q Consensus 191 -----------------------~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~ 246 (343)
++.+..||+.+++.+.++++..+.....+. .+++++.|+.||.++.||.++|+.+.
T Consensus 431 ~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw 510 (689)
T 1yiq_A 431 QLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLW 510 (689)
T ss_dssp CCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccce
Confidence 267999999999999988855544332333 67899999999999999999999999
Q ss_pred EecccccccEEEEEEEecCC
Q 019326 247 CIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 247 ~~~~~h~~~v~~~~~~~~~~ 266 (343)
++..++...-.-+.+..++.
T Consensus 511 ~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 511 EQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp EEECSSCCCSCCEEEEETTE
T ss_pred eeeCCCCcccCceEEEECCE
Confidence 98844333334466666664
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.59 E-value=2.4e-11 Score=99.51 Aligned_cols=215 Identities=9% Similarity=0.036 Sum_probs=146.7
Q ss_pred CCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC
Q 019326 41 HLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA 117 (343)
Q Consensus 41 h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 117 (343)
+..-..+..|+ +.++++...++.|..||..+++. ..+. . ...+.++++++++ + |+.+. ++.|.+||.
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~-~~~~~~i~~~~dG-----~-l~v~~-~~~l~~~d~ 80 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-M-DAPVSSVALRQSG-----G-YVATI-GTKFCALNW 80 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-C-SSCEEEEEEBTTS-----S-EEEEE-TTEEEEEET
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-C-CCceEEEEECCCC-----C-EEEEE-CCeEEEEEC
Confidence 34455677887 45677777789999999987765 3333 3 4679999999998 5 44444 568999999
Q ss_pred CCcceeeeeee----ccccEEEEEEecCCCEEEEEeCC---------CeEEEEEccC-CceeEEEEcCCcceEEEEeCCC
Q 019326 118 DPFVLLTSVKV----HKKGVNDLAVHHSGKLALTVGRD---------DCLAMVNLVR-GRRSFYHKIGKEASLIKFDGSG 183 (343)
Q Consensus 118 ~~~~~~~~~~~----~~~~v~~i~~~~~~~~l~~~~~d---------~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
++++....... ....+..++++|+|+++++.... ..-.+|.+.. ++.............++|+|++
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg 160 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDH 160 (297)
T ss_dssp TTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTS
T ss_pred CCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCC
Confidence 87664332221 12358899999999876654321 2234554443 3333333334567889999999
Q ss_pred CEEEEE--eCCcEEEEEc--cccee-----EEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccc
Q 019326 184 EKFFMV--TEEKVGIHQA--EDAKL-----LCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAH 252 (343)
Q Consensus 184 ~~~~~~--~~~~i~~~d~--~~~~~-----~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h 252 (343)
+.++.+ ..+.|.+|++ .++.. ...+. .......+++++ +++.++....+.|..||..+++.+..+. .+
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~-~p 239 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK-LP 239 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE-CS
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE-CC
Confidence 988766 5788999987 44443 22222 234577888874 5555555667889999999999998888 66
Q ss_pred cccEEEEEEE-ecCC
Q 019326 253 SARVKGIVVL-TKND 266 (343)
Q Consensus 253 ~~~v~~~~~~-~~~~ 266 (343)
...+++++|. ++..
T Consensus 240 ~~~~t~~~f~g~d~~ 254 (297)
T 3g4e_A 240 VDKTTSCCFGGKNYS 254 (297)
T ss_dssp SSBEEEEEEESGGGC
T ss_pred CCCceEEEEeCCCCC
Confidence 6789999998 6654
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.58 E-value=4.8e-11 Score=97.62 Aligned_cols=249 Identities=12% Similarity=0.089 Sum_probs=163.1
Q ss_pred cCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeE-eccCCCC
Q 019326 8 YEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGA-IHHHESS 84 (343)
Q Consensus 8 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~ 84 (343)
.++.|.+|+... +... ..+..+...+.+++++ +++.++...++.|..||.. ++.... +... ..
T Consensus 39 ~~~~v~~~~~~~-----------~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~-~~ 104 (300)
T 2qc5_A 39 KANKISSLDQSG-----------RIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQP-DS 104 (300)
T ss_dssp TTTEEEEECTTS-----------CEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST-TC
T ss_pred CCCeEEEECCCC-----------ceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCC-CC
Confidence 456777776541 1111 2233445678899998 5555555557889999988 554322 2223 46
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeee-eeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTS-VKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR 163 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~ 163 (343)
.+.++++.+++ +++++...++.|..+|.. ++.... +......+..+++.++++..++...++.|..+|. +++
T Consensus 105 ~~~~i~~~~~g-----~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 177 (300)
T 2qc5_A 105 GPYGITEGLNG-----DIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGK 177 (300)
T ss_dssp CEEEEEECSTT-----CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CCccceECCCC-----CEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCc
Confidence 78999999888 566666668899999987 444322 2223457899999999997777666889999998 555
Q ss_pred eeEEEEc---CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEE-ec-CCcceEEeeecCC-CeEEEEeCCCcEEE
Q 019326 164 RSFYHKI---GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCE-LD-GKKRILCAAPGEN-GVLFTGGEDRSITA 236 (343)
Q Consensus 164 ~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~-~~-~~~~i~~~~~~~~-~~l~~~~~dg~i~i 236 (343)
... ... ...+..++++++++.+++. ..+.|.+|+. +++.... +. ....+.+++++++ ++.++...++.|..
T Consensus 178 ~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 255 (300)
T 2qc5_A 178 LEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGR 255 (300)
T ss_dssp EEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEE
T ss_pred EEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEE
Confidence 433 222 2457789999999877776 5678999998 4443332 22 3456788888754 44444445689999
Q ss_pred EECCCCceeE-EecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 237 WDTNSGKVAY-CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 237 ~d~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
||. +++... .+. .....+.++++.+++. ++++.. . .|..+|.+
T Consensus 256 ~~~-~g~~~~~~~~-~~~~~~~~i~~~~~g~---------l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 256 ITN-DNTIQEYQLQ-TENAEPHGITFGKDGS---------VWFALK-C-KIGKLNLN 299 (300)
T ss_dssp ECT-TSCEEEEECC-STTCCCCCEEECTTSC---------EEEECS-S-EEEEEEEC
T ss_pred ECC-CCcEEEEECC-ccCCccceeEeCCCCC---------EEEEcc-C-ceEEeCCC
Confidence 998 454332 222 3445678888887765 555544 4 67666653
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.57 E-value=8.8e-12 Score=106.63 Aligned_cols=230 Identities=10% Similarity=0.053 Sum_probs=157.1
Q ss_pred CCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC--eEEEEECC
Q 019326 43 SPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG--FVSIFDAD 118 (343)
Q Consensus 43 ~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~ 118 (343)
.....|+|+ ++++++...++.|++||.+++......... .... ++|++++ +.|+++..++ .|.+++..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~--~~~~-ia~~~~g-----~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF--KGGK-PAVTKDK-----QRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC--CBCB-CEECTTS-----SEEEEEBSSTTCEEEEEEGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC--CCCc-eeEecCC-----CcEEEEecCCCceEEEEEcC
Confidence 467889998 666666666789999999987766555443 3334 9999998 6888888766 79999887
Q ss_pred Ccceeeee----eeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE----cCC-c-ce-EEEEeCCCCEEE
Q 019326 119 PFVLLTSV----KVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK----IGK-E-AS-LIKFDGSGEKFF 187 (343)
Q Consensus 119 ~~~~~~~~----~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~----~~~-~-~~-~~~~~~~~~~~~ 187 (343)
.+.....+ ......+.+++++|++..|+.+..++.|+.||..++....... ... . +. .++++|++..++
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 65443333 1134567889999955556667778999999998776433311 111 1 23 899999655555
Q ss_pred EE--eCCcEEEEEcccceeEEEecC---------------CcceEEeeecC-CCeEEEEe-CCCcEEEEECCCCceeEEe
Q 019326 188 MV--TEEKVGIHQAEDAKLLCELDG---------------KKRILCAAPGE-NGVLFTGG-EDRSITAWDTNSGKVAYCI 248 (343)
Q Consensus 188 ~~--~~~~i~~~d~~~~~~~~~~~~---------------~~~i~~~~~~~-~~~l~~~~-~dg~i~i~d~~~~~~~~~~ 248 (343)
++ ..+.|+.|+.... ....... -.....+++++ ++++++-. .++.|+.|++.+++. ..+
T Consensus 283 v~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~ 360 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STV 360 (409)
T ss_dssp EEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEE
T ss_pred EEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEE
Confidence 55 6788999987643 2222111 13467888884 45666666 788999999877764 333
Q ss_pred cccc---------------cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 249 EDAH---------------SARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 249 ~~~h---------------~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
. ++ -....++++.+++. ++++-..+++|+.++++
T Consensus 361 ~-g~~~~~g~~~g~~~~~~~~~P~giavd~~g~---------lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 361 A-GQVDVASQIDGTPLEATFNYPYDICYDGEGG---------YWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp E-ECTTCBSCCCBSTTTCCBSSEEEEEECSSSE---------EEEEESTTCEEEEEEEC
T ss_pred e-CCCCCCCcCCCChhceEeCCceEEEEcCCCC---------EEEEECCCCeEEEEEeC
Confidence 3 33 24578999988765 77787888888887753
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.55 E-value=1.6e-12 Score=108.48 Aligned_cols=257 Identities=12% Similarity=0.078 Sum_probs=165.0
Q ss_pred CceEEEeeC-----CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee----------CCCeEEEEE
Q 019326 52 GTAAASGGT-----DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS----------ADGFVSIFD 116 (343)
Q Consensus 52 ~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~----------~dg~i~iwd 116 (343)
++.+++... ++.|.+.|..+++.+..+... ..+ . ++++|++ ++++++. .++.|.+||
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~P-~-va~spDG-----~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FLP-N-PVVADDG-----SFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SSC-E-EEECTTS-----SCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-CCC-c-EEECCCC-----CEEEEEcccccccccCCCCCEEEEEE
Confidence 556666554 679999999999999999866 455 4 9999999 6676665 367899999
Q ss_pred CCCcceeeeeeecc-------ccEEEEEEecCCCEEEEEeC--CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEE
Q 019326 117 ADPFVLLTSVKVHK-------KGVNDLAVHHSGKLALTVGR--DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 117 ~~~~~~~~~~~~~~-------~~v~~i~~~~~~~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
..+.+.+.++.... .....++|+|+|++++++.. ++.|.++|+.+++.+.....+.. ...+....+.++
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~ 193 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFF 193 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeE
Confidence 99999888886432 23556899999999988864 68999999999998887766542 122222333333
Q ss_pred EE-eCCcEEEEEccc-ceeEEEec-----CCcceE-Eeeec-CCCeEEEEeCCCcEEEEECCCCc--eeEEec-------
Q 019326 188 MV-TEEKVGIHQAED-AKLLCELD-----GKKRIL-CAAPG-ENGVLFTGGEDRSITAWDTNSGK--VAYCIE------- 249 (343)
Q Consensus 188 ~~-~~~~i~~~d~~~-~~~~~~~~-----~~~~i~-~~~~~-~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~------- 249 (343)
+. .||.+.+.++.+ ++...... ...++. ...|. .++.++..+.+|.|++.|..+.. .+..+.
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~ 273 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAER 273 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHH
T ss_pred EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccc
Confidence 33 677777777765 44322111 111221 12342 33334345568999999997654 222221
Q ss_pred --ccccccEEEEEEEecCCCCCCCCCCeEEEEEcC----------CCcEEEEeccCccccCCCcccccccccceeEEEcC
Q 019326 250 --DAHSARVKGIVVLTKNDGGSTAENPYLVASASS----------DGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGS 317 (343)
Q Consensus 250 --~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s 317 (343)
.-.......+++++++. .++.... .+.|.+.|+.+.+.. ..+..+.++..++++
T Consensus 274 ~~g~~p~g~q~~a~~~~~~---------~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~-----~~i~vg~~~~~lavs 339 (386)
T 3sjl_D 274 ADGWRPGGWQQVAYHRALD---------RIYLLVDQRDEWRHKTASRFVVVLDAKTGERL-----AKFEMGHEIDSINVS 339 (386)
T ss_dssp HTTEEECSSSCEEEETTTT---------EEEEEEEECCTTCTTSCEEEEEEEETTTCCEE-----EEEEEEEEECEEEEC
T ss_pred cccccCCCcceeeECCCCC---------eEEEEeccccccccCCCCCEEEEEECCCCeEE-----EEEECCCCcceEEEC
Confidence 00122333466677665 5555432 257899999987533 344445578899999
Q ss_pred CCCc-eecc-ccCCCCC
Q 019326 318 STKS-FKRP-QIGDSAP 332 (343)
Q Consensus 318 ~~~~-~~~~-~~~~~~~ 332 (343)
+|++ +++. ...++.+
T Consensus 340 ~D~~~~ly~tn~~~~~V 356 (386)
T 3sjl_D 340 QDEKPLLYALSTGDKTL 356 (386)
T ss_dssp SSSSCEEEEEETTTTEE
T ss_pred CCCCeEEEEEcCCCCeE
Confidence 9986 4444 3434433
No 213
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.55 E-value=1.8e-13 Score=113.95 Aligned_cols=283 Identities=13% Similarity=0.108 Sum_probs=182.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
.|.+|+.++.|..|| .. ++ ....+..+...+.++... ...++.++.+ |..+|. +++.+..+..
T Consensus 32 ~l~v~t~~~~l~~~d-~~-------g~-----~~~~~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~ 95 (330)
T 3hxj_A 32 TIYLGSSNKNLYAIN-TD-------GS-----VKWFFKSGEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDT 95 (330)
T ss_dssp CEECSSTTTTTEEEC-TT-------SC-----EEESSCGGGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC
T ss_pred eEEEEcCCCEEEEEC-CC-------Cc-----EEEEEecCCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEEC
Confidence 366778888899998 55 22 122222334455677776 6667777665 888886 6666655544
Q ss_pred CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 81 HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 81 ~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
. ........+. ++ .++.++.++.|..+|.. ++.......+...+.++...+++. ++.++.++.|..+|..
T Consensus 96 ~-~~~~~~~~~~-~~------~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 96 K-KAIVSDFTIF-ED------ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD 165 (330)
T ss_dssp ------CCEEEE-TT------EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT
T ss_pred C-CCcccCceEE-CC------EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC
Confidence 3 3333333343 43 78888889999999998 777776665555666677777765 6667788999999998
Q ss_pred CCceeEEEEcC-CcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEE
Q 019326 161 RGRRSFYHKIG-KEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWD 238 (343)
Q Consensus 161 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d 238 (343)
++........ ..+..+...+++..++.. +.+..+| .+++...... ....+.++...+++.++.++.++.|..+|
T Consensus 166 -g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 166 -GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAIN 241 (330)
T ss_dssp -SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEEC
T ss_pred -CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEEC
Confidence 7766555544 345567777777765554 8999999 7777766665 33556677776666888888888999998
Q ss_pred CCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccc-cccceeEEEcC
Q 019326 239 TNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAK-TNSRLTCLAGS 317 (343)
Q Consensus 239 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~i~~~~~s 317 (343)
. +++.+..+. .....+..+.+.+++ .|..++.+|.|..+|. ++... .... ....+.++...
T Consensus 242 ~-~g~~~~~~~-~~~~~~~~~~~~~~g----------~l~v~t~~ggl~~~d~-~g~~~-----~~~~~~~~~~~~~~~d 303 (330)
T 3hxj_A 242 P-DGTEKWRFK-TGKRIESSPVIGNTD----------TIYFGSYDGHLYAINP-DGTEK-----WNFETGSWIIATPVID 303 (330)
T ss_dssp T-TSCEEEEEE-CSSCCCSCCEECTTS----------CEEEECTTCEEEEECT-TSCEE-----EEEECSSCCCSCCEEC
T ss_pred C-CCCEeEEee-CCCCccccceEcCCC----------eEEEecCCCCEEEECC-CCcEE-----EEEEcCCccccceEEc
Confidence 4 567776666 333334445554344 5788888989999985 43211 1111 12346667776
Q ss_pred CCCceeccccCCCCCC
Q 019326 318 STKSFKRPQIGDSAPK 333 (343)
Q Consensus 318 ~~~~~~~~~~~~~~~~ 333 (343)
+++.+.+ +..++...
T Consensus 304 ~~g~l~~-gt~~G~~~ 318 (330)
T 3hxj_A 304 ENGTIYF-GTRNGKFY 318 (330)
T ss_dssp TTCCEEE-ECTTSCEE
T ss_pred CCCEEEE-EcCCCeEE
Confidence 6766544 55555433
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.53 E-value=9.1e-13 Score=110.41 Aligned_cols=167 Identities=9% Similarity=0.068 Sum_probs=127.8
Q ss_pred CeEEEEec--CceEEEeeCCCeEEEEEcCCCe---------eee-EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCe
Q 019326 44 PITTVAVS--GTAAASGGTDDTIHLYDLSTSS---------SLG-AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGF 111 (343)
Q Consensus 44 ~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~---------~~~-~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 111 (343)
+++.|+++ ..++++|+.++ +++|+++..+ ... ....+ .. |+.|+| ++ ++|+++ .++.
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~l-p~-V~~l~f--d~-----~~L~v~-~~~~ 107 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEI-PD-VIFVCF--HG-----DQVLVS-TRNA 107 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEEC-TT-EEEEEE--ET-----TEEEEE-ESSE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeC-CC-eeEEEE--CC-----CEEEEE-cCCc
Confidence 68888988 77888888875 6679876543 111 12234 45 999999 66 688888 8899
Q ss_pred EEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEeC
Q 019326 112 VSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVTE 191 (343)
Q Consensus 112 i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (343)
|++||+.+.........|...+.++.+.+. .++++..||.|.+||+.++.... ....+.+++|+|+| ..+...+
T Consensus 108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG-~~vg~~d 181 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ-LAVLLKD 181 (388)
T ss_dssp EEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE-EEEEETT
T ss_pred EEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc-eEEEEcC
Confidence 999999887766677778888988887765 38889999999999999877543 45689999999999 4444499
Q ss_pred CcEEEEEccccee--EEEe------c----CCcceEEeeecCCC-eEEE
Q 019326 192 EKVGIHQAEDAKL--LCEL------D----GKKRILCAAPGENG-VLFT 227 (343)
Q Consensus 192 ~~i~~~d~~~~~~--~~~~------~----~~~~i~~~~~~~~~-~l~~ 227 (343)
+.+++|+...... ...+ . +...|.++.|..+. ++++
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9999999888775 5556 2 56789999998554 4443
No 215
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.53 E-value=7.9e-12 Score=115.50 Aligned_cols=221 Identities=13% Similarity=0.036 Sum_probs=143.4
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeCC-----CeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCe-----
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSAD-----GFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDC----- 153 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~----- 153 (343)
..+..++|+|++ ++|+.+..+ ..|++||+.+++.+.. ..+...+..++|+|| +.|+.++.++.
T Consensus 163 ~~~~~~~~SPDG-----~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 163 TALDAWAASDDG-----RLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp EEEEEEEECTTS-----SEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred EEEEeEEECCCC-----CEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccc
Confidence 368899999999 677766543 3699999999887543 212223357899999 98888887654
Q ss_pred ---------EEEEEccCCce--eEEEEcC---CcceEEEEeCCCCEEEEE-eCC-----cEEEEEcccc--eeEEEe-cC
Q 019326 154 ---------LAMVNLVRGRR--SFYHKIG---KEASLIKFDGSGEKFFMV-TEE-----KVGIHQAEDA--KLLCEL-DG 210 (343)
Q Consensus 154 ---------i~~wd~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~-----~i~~~d~~~~--~~~~~~-~~ 210 (343)
|++|++.++.. ....... ..+..+.|+|+|++++.. .++ .+.+||+.++ +....+ .+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC
Confidence 89999987762 2222222 236789999999988877 443 7999999876 413333 33
Q ss_pred CcceEEeeecCCCeEEEEeC----CCcEEEEECCCC-ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCc
Q 019326 211 KKRILCAAPGENGVLFTGGE----DRSITAWDTNSG-KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGV 285 (343)
Q Consensus 211 ~~~i~~~~~~~~~~l~~~~~----dg~i~i~d~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~ 285 (343)
........+.+++.|+..+. ++.|.+||+.++ .....+...+...+..+.+. .+. ++++...|+.
T Consensus 316 ~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~---------lv~~~~~dg~ 385 (741)
T 1yr2_A 316 LKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNR---------LFASYIHDAK 385 (741)
T ss_dssp SSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTE---------EEEEEEETTE
T ss_pred CCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCE---------EEEEEEECCE
Confidence 33344433446666666554 355999999875 23344432555567777776 333 7888899998
Q ss_pred EEEEeccC-ccccCCCcccccccccceeEEEcCCCCceec
Q 019326 286 ICVWDVRM-AIKEKPLPLAEAKTNSRLTCLAGSSTKSFKR 324 (343)
Q Consensus 286 i~vwd~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~ 324 (343)
.+||.++. +..... + .......+..+++++++..++
T Consensus 386 ~~l~~~~~~g~~~~~--l-~~~~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 386 SQVLAFDLDGKPAGA--V-SLPGIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp EEEEEEETTSCEEEE--C-BCSSSCEEEEEECCBTCSCEE
T ss_pred EEEEEEeCCCCceee--c-cCCCCeEEEEeecCCCCCEEE
Confidence 88886652 221111 1 122234577888888776444
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.53 E-value=1.5e-10 Score=96.05 Aligned_cols=209 Identities=14% Similarity=0.077 Sum_probs=140.0
Q ss_pred CeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc
Q 019326 44 PITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120 (343)
Q Consensus 44 ~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 120 (343)
...+.+|+ +..+++...++.|..||..+++.. .+. . ...+.++++.+++ ++++ ++.+ .|.+||..++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~-~~~v~~i~~~~dg-----~l~v-~~~~-gl~~~d~~~g 119 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-L-PFMGSALAKISDS-----KQLI-ASDD-GLFLRDTATG 119 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-C-SSCEEEEEEEETT-----EEEE-EETT-EEEEEETTTC
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-C-CCcceEEEEeCCC-----eEEE-EECC-CEEEEECCCC
Confidence 34677887 456667777899999999877543 333 2 3679999999998 5555 4444 5999999877
Q ss_pred ceeeeeee----ccccEEEEEEecCCCEEEEEeC------CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-
Q 019326 121 VLLTSVKV----HKKGVNDLAVHHSGKLALTVGR------DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV- 189 (343)
Q Consensus 121 ~~~~~~~~----~~~~v~~i~~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 189 (343)
+....... ....+.+++++|+|+++++... .+.|..++ +++.............++|+|+++.++.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~ 197 (326)
T 2ghs_A 120 VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVD 197 (326)
T ss_dssp CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEE
T ss_pred cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEE
Confidence 64332221 1236889999999987665542 24566666 45433332333456789999999987666
Q ss_pred -eCCcEEEEEcc--cc-e-----eEEEec-CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEE
Q 019326 190 -TEEKVGIHQAE--DA-K-----LLCELD-GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKG 258 (343)
Q Consensus 190 -~~~~i~~~d~~--~~-~-----~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~ 258 (343)
.++.|.+|+.. ++ . ....+. .......++++. +++.++...++.|.+||. +++.+..+. .+...+++
T Consensus 198 ~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~-~~~~~~~~ 275 (326)
T 2ghs_A 198 TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE-VPGKQTTC 275 (326)
T ss_dssp TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE-CSCSBEEE
T ss_pred CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEE-CCCCCcEE
Confidence 46789999985 55 3 222222 234567788874 444444445688999998 577777777 66667999
Q ss_pred EEEE-ecCC
Q 019326 259 IVVL-TKND 266 (343)
Q Consensus 259 ~~~~-~~~~ 266 (343)
++|. +++.
T Consensus 276 ~af~g~d~~ 284 (326)
T 2ghs_A 276 PAFIGPDAS 284 (326)
T ss_dssp EEEESTTSC
T ss_pred EEEecCCCC
Confidence 9998 5554
No 217
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.53 E-value=1.7e-11 Score=101.20 Aligned_cols=223 Identities=10% Similarity=-0.011 Sum_probs=146.8
Q ss_pred CCCeEEEEEeCCCCCCCCceEEE-------eeCCCeEEEEECCCcceeeeeee-----ccccEEEEEEecC-CCEEEEEe
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFS-------TSADGFVSIFDADPFVLLTSVKV-----HKKGVNDLAVHHS-GKLALTVG 149 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~i~~~~~-~~~l~~~~ 149 (343)
-....+++|.+++ .++++ +..++.|.+||..+++... +.. +...+.+++++++ ++++++ +
T Consensus 17 ~~~~~~~~~~~~g-----~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~ 89 (314)
T 1pjx_A 17 IPGAEGPVFDKNG-----DFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPEVNGYGGIPAGCQCDRDANQLFVA-D 89 (314)
T ss_dssp CTTCEEEEECTTS-----CEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCEETTEECCEEEEEECSSSSEEEEE-E
T ss_pred CCCccCceECCCC-----CEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecccCCCCCCCceEEEecCCCcEEEE-E
Confidence 3567899999887 56666 5778999999987766532 322 4467899999999 654544 4
Q ss_pred CCCeEEEEEccCCceeEE-EEc-----CCcceEEEEeCCCCEEEEE-eC---------------CcEEEEEcccceeEEE
Q 019326 150 RDDCLAMVNLVRGRRSFY-HKI-----GKEASLIKFDGSGEKFFMV-TE---------------EKVGIHQAEDAKLLCE 207 (343)
Q Consensus 150 ~d~~i~~wd~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~-~~---------------~~i~~~d~~~~~~~~~ 207 (343)
..+.|..||.. ++.... ... ...+..++++++++.+++. .+ +.+..++.. ++....
T Consensus 90 ~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 90 MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 45579999988 664332 211 1347789999999888777 43 467777765 544433
Q ss_pred ecCCcceEEeeec----CCC-eEEEE-eCCCcEEEEECC-CCc-----eeEEeccccc-ccEEEEEEEecCCCCCCCCCC
Q 019326 208 LDGKKRILCAAPG----ENG-VLFTG-GEDRSITAWDTN-SGK-----VAYCIEDAHS-ARVKGIVVLTKNDGGSTAENP 274 (343)
Q Consensus 208 ~~~~~~i~~~~~~----~~~-~l~~~-~~dg~i~i~d~~-~~~-----~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~ 274 (343)
..+......++++ +++ .++.+ ..++.|.+||.. +++ ....+. .+. ..+..+++.+++.
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~i~~d~~G~-------- 238 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP-GTHEGGADGMDFDEDNN-------- 238 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC-CCSSCEEEEEEEBTTCC--------
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC-CCCCCCCCceEECCCCC--------
Confidence 3333445677776 543 55444 567899999986 443 222333 333 5678899988776
Q ss_pred eEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCcee-ccccC
Q 019326 275 YLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFK-RPQIG 328 (343)
Q Consensus 275 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~-~~~~~ 328 (343)
++++...++.|.+||.+++..... ... ....+.++++++++..+ +....
T Consensus 239 -l~v~~~~~~~i~~~d~~~g~~~~~---~~~-~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 239 -LLVANWGSSHIEVFGPDGGQPKMR---IRC-PFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp -EEEEEETTTEEEEECTTCBSCSEE---EEC-SSSCEEEEEECTTSSEEEEEETT
T ss_pred -EEEEEcCCCEEEEEcCCCCcEeEE---EeC-CCCCceeEEECCCCCEEEEEeCC
Confidence 777777789999999885532111 111 12568899999999844 44333
No 218
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.53 E-value=1.1e-12 Score=109.06 Aligned_cols=218 Identities=10% Similarity=0.075 Sum_probs=157.7
Q ss_pred cCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeecc
Q 019326 51 SGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHK 130 (343)
Q Consensus 51 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 130 (343)
.+..++.++.++.|..+|.. ++....+... ...+.++...+++ .++.++.++.|..+|.. ++....+....
T Consensus 106 ~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~-~~~~~~~~~~~~g------~l~vgt~~~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 106 FEDILYVTSMDGHLYAINTD-GTEKWRFKTK-KAIYATPIVSEDG------TIYVGSNDNYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp ETTEEEEECTTSEEEEECTT-SCEEEEEECS-SCCCSCCEECTTS------CEEEECTTSEEEEECTT-SCEEEEEECSS
T ss_pred ECCEEEEEecCCEEEEEcCC-CCEEEEEcCC-CceeeeeEEcCCC------EEEEEcCCCEEEEECCC-CCEeEEEecCC
Confidence 37778888889999999998 7777777655 5566777777666 57778888999999998 77777776656
Q ss_pred ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC-CcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec
Q 019326 131 KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG-KEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD 209 (343)
Q Consensus 131 ~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 209 (343)
..+.++...+++...+ ++ +.|..+| .+++........ ..+..+...+++...+...++.+..++. +++.+..+.
T Consensus 177 ~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~ 251 (330)
T 3hxj_A 177 AITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFK 251 (330)
T ss_dssp CCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEE
T ss_pred CceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEee
Confidence 6677777877776544 44 7899999 677766555443 4577788888887777667788888874 556655555
Q ss_pred CCc-ceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEE
Q 019326 210 GKK-RILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICV 288 (343)
Q Consensus 210 ~~~-~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~v 288 (343)
... .+..+....++.|+.++.+|.|..+|. +++.+..+. .....+.++...+++ .|..++.+|.+++
T Consensus 252 ~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~-~~~~~~~~~~~d~~g----------~l~~gt~~G~~~~ 319 (330)
T 3hxj_A 252 TGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFE-TGSWIIATPVIDENG----------TIYFGTRNGKFYA 319 (330)
T ss_dssp CSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEE-CSSCCCSCCEECTTC----------CEEEECTTSCEEE
T ss_pred CCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEE-cCCccccceEEcCCC----------EEEEEcCCCeEEE
Confidence 332 233445545678889999999999996 677777766 445556666665555 4778999999999
Q ss_pred EeccCc
Q 019326 289 WDVRMA 294 (343)
Q Consensus 289 wd~~~~ 294 (343)
...+..
T Consensus 320 ~~~~~~ 325 (330)
T 3hxj_A 320 LFNLEH 325 (330)
T ss_dssp EEC---
T ss_pred Eecccc
Confidence 887754
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.51 E-value=3.4e-11 Score=99.01 Aligned_cols=223 Identities=11% Similarity=0.008 Sum_probs=149.6
Q ss_pred ecCCCCCeEEEEec--Cc-eEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 38 YPAHLSPITTVAVS--GT-AAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 38 ~~~h~~~v~~l~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
+..........+|+ ++ ++++...++.|..|+. +++ ...+..+ ...+..+++.+++ +++++...++.|.+
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~-~~~~~gl~~d~dG-----~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDA-TAFTNGNAVDAQQ-----RLVHCEHGRRAITR 111 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEES-CSCEEEEEECTTS-----CEEEEETTTTEEEE
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCC-CCccceeeECCCC-----CEEEEECCCCEEEE
Confidence 33455667788887 55 6777778899999998 454 3445445 5778999999998 55555555688999
Q ss_pred EECCCcceeeeeeec-----cccEEEEEEecCCCEEEE----EeC-------------CCeEEEEEccCCceeEEEEcCC
Q 019326 115 FDADPFVLLTSVKVH-----KKGVNDLAVHHSGKLALT----VGR-------------DDCLAMVNLVRGRRSFYHKIGK 172 (343)
Q Consensus 115 wd~~~~~~~~~~~~~-----~~~v~~i~~~~~~~~l~~----~~~-------------d~~i~~wd~~~~~~~~~~~~~~ 172 (343)
|+.+ ++. ..+..+ ...+.+++++++|+++++ +.. .+.|..+|..+++..... ...
T Consensus 112 ~~~~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~ 188 (305)
T 3dr2_A 112 SDAD-GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLD 188 (305)
T ss_dssp ECTT-SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EES
T ss_pred ECCC-CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCC
Confidence 9986 443 222211 124678999999998876 332 256888887667654433 335
Q ss_pred cceEEEEeCCCCEEEEE-eC------CcEEEEEcccceeE--EEec--CCcceEEeeecCCCeEEEEeCCCcEEEEECCC
Q 019326 173 EASLIKFDGSGEKFFMV-TE------EKVGIHQAEDAKLL--CELD--GKKRILCAAPGENGVLFTGGEDRSITAWDTNS 241 (343)
Q Consensus 173 ~~~~~~~~~~~~~~~~~-~~------~~i~~~d~~~~~~~--~~~~--~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~ 241 (343)
....++|+|+++.++++ .. +.|.+|++...... ..+. .......++++....|++++.+| |.+|+. +
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~g-v~~~~~-~ 266 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTG-VCVFDS-D 266 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSSE-EEEECT-T
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCCc-EEEECC-C
Confidence 56789999999988777 43 68999998765411 1111 22334456776554566666554 999998 4
Q ss_pred CceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCC
Q 019326 242 GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDG 284 (343)
Q Consensus 242 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg 284 (343)
++.+..+. .+. .+..++|.+++. .|+.++.++
T Consensus 267 g~~~~~~~-~~~-~~~~~~f~~d~~---------~L~it~~~~ 298 (305)
T 3dr2_A 267 GQLLGHIP-TPG-TASNCTFDQAQQ---------RLFITGGPC 298 (305)
T ss_dssp SCEEEEEE-CSS-CCCEEEECTTSC---------EEEEEETTE
T ss_pred CCEEEEEE-CCC-ceeEEEEeCCCC---------EEEEEcCCe
Confidence 77777776 333 588899986655 676666654
No 220
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=1e-12 Score=110.06 Aligned_cols=173 Identities=14% Similarity=0.111 Sum_probs=131.5
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCc-----------eeEEEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcc
Q 019326 132 GVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR-----------RSFYHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAE 200 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 200 (343)
+++.+++++...++++|+.++ +.+|++...+ ......++. +..++| ++..++++.++.|.+||++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEEEEEch
Confidence 688999999999999999874 6669876443 223455667 999999 8999999988999999998
Q ss_pred cceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEE
Q 019326 201 DAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVAS 279 (343)
Q Consensus 201 ~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s 279 (343)
+........ +..++.++.+.+.+ +++++.||.|.+||+.++.... +...|++++|+|.+ ++.
T Consensus 115 sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG-----------~~v 177 (388)
T 1xip_A 115 ELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ-----------LAV 177 (388)
T ss_dssp STTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE-----------EEE
T ss_pred hhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc-----------eEE
Confidence 765444333 66678887776444 8888999999999999887642 55689999999985 567
Q ss_pred EcCCCcEEEEeccCccc--cCCCcc-cc----cccccceeEEEcCCCCceecc
Q 019326 280 ASSDGVICVWDVRMAIK--EKPLPL-AE----AKTNSRLTCLAGSSTKSFKRP 325 (343)
Q Consensus 280 ~~~dg~i~vwd~~~~~~--~~~~~~-~~----~~~~~~i~~~~~s~~~~~~~~ 325 (343)
|..||++++|+...... ...++. .. ..+...|.++.|.+++.|++.
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 88899999998887542 111111 01 124567999999999998875
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.49 E-value=1.1e-16 Score=135.23 Aligned_cols=254 Identities=8% Similarity=-0.019 Sum_probs=138.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH 79 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 79 (343)
.|++++.||.|+.||..+ ++ .+..+.. +++.+..+. +..+++++.||.|+.||..+++.+..+.
T Consensus 11 ~v~~gs~dg~v~a~d~~t-------G~-----~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~ 76 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRT-------GS-----IKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLP 76 (369)
T ss_dssp EEEEEETTSEEEEEETTT-------CC-----EEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECS
T ss_pred EEEEEcCCCEEEEEECCC-------CC-----EEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeee
Confidence 478999999999999887 32 2223332 334433333 5678888899999999999998877664
Q ss_pred cCCCCCeE-EEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 019326 80 HHESSSVT-SLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 80 ~~~~~~v~-~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd 158 (343)
.+....+. +..+. .+ ..+++++.++.|+.||.++++.+..+..+. ...++|++..+++++.|+.|+.||
T Consensus 77 ~~~~~~~~~sp~~~-~~-----~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d 146 (369)
T 2hz6_A 77 FTIPELVQASPCRS-SD-----GILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYD 146 (369)
T ss_dssp CCHHHHHTTCSCC-----------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCC
T ss_pred ccCccccccCceEe-cC-----CEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEE
Confidence 33011110 00111 22 467888999999999999999988877554 234566788899999999999999
Q ss_pred ccCCceeEEEEcCCcceEEEEeCC----CCEEEEEeCCcEEEEEcccceeEEEecCCcceEEe-eecCCCeEEEE---eC
Q 019326 159 LVRGRRSFYHKIGKEASLIKFDGS----GEKFFMVTEEKVGIHQAEDAKLLCELDGKKRILCA-APGENGVLFTG---GE 230 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~i~~~-~~~~~~~l~~~---~~ 230 (343)
.++++......... .....+.++ +..++...++.+..||..+++.+.......++..+ .++.+..+... ..
T Consensus 147 ~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~~~~~~ 225 (369)
T 2hz6_A 147 TKTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMHINVA 225 (369)
T ss_dssp SSSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEECCEEEE
T ss_pred CCCCCEEEeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEeccceeec
Confidence 99998765544321 112223332 44444448999999999999999888866666543 33333332110 01
Q ss_pred CCcEEEEECCCCc----eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 231 DRSITAWDTNSGK----VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 231 dg~i~i~d~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
++.++.+|..+|+ .+.++..++ .+.+... .+ . .|+.++.||.++.++...
T Consensus 226 ~~~l~~ld~~tG~~~~~~~W~~~~~~--~~~sp~~-~~-g---------~lyv~~~~G~l~al~~~~ 279 (369)
T 2hz6_A 226 VETLRYLTFMSGEVGRITKWKYPFPK--ETEAKSK-LT-P---------TLYVGKYSTSLYASPSMV 279 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCCCC--HHHHHHH-SE-E---------EECBEECSSCEECCEEEE
T ss_pred ccceeeeehhcCCcccceeeeeccCc--ccccccc-cc-c---------eEEEecccCCEEecCccc
Confidence 3456667766666 544443111 1110011 11 1 788888999999998874
No 222
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.49 E-value=2e-11 Score=104.45 Aligned_cols=231 Identities=11% Similarity=0.040 Sum_probs=155.5
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCC--eEEEEEccC
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD--CLAMVNLVR 161 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~--~i~~wd~~~ 161 (343)
.....|+|++++ +++++...++.|++||..+++....... ..... ++|+++++.|+++..++ .|..++...
T Consensus 131 ~~P~~la~d~~g-----~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVGNN-----TVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECSTT-----EEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeCCC-----CEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCC
Confidence 467899999988 6677777779999999988765544443 33334 99999999998888766 899999877
Q ss_pred CceeEEE----E-cCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEE----ecCCc---ceEEeeecC-CC-eEE
Q 019326 162 GRRSFYH----K-IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCE----LDGKK---RILCAAPGE-NG-VLF 226 (343)
Q Consensus 162 ~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~----~~~~~---~i~~~~~~~-~~-~l~ 226 (343)
+...... . ....+..++++|++..++++ .++.|..||..++..... ..... +...+++++ ++ +++
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 6653333 2 33567789999965555557 778899999987653322 11111 122788875 44 455
Q ss_pred EEeCCCcEEEEECCCCceeEEeccccc---------------ccEEEEEEEecCCCCCCCCCCeEEEEEc-CCCcEEEEe
Q 019326 227 TGGEDRSITAWDTNSGKVAYCIEDAHS---------------ARVKGIVVLTKNDGGSTAENPYLVASAS-SDGVICVWD 290 (343)
Q Consensus 227 ~~~~dg~i~i~d~~~~~~~~~~~~~h~---------------~~v~~~~~~~~~~~~~~~~~~~~l~s~~-~dg~i~vwd 290 (343)
+-..++.|+.|+.... +..+. ++. ....++++++++. ++++-+ .+++|+.|+
T Consensus 284 ~d~~~~~I~~~~~~g~--~~~~~-g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~---------lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGE--CEWFC-GSATQKTVQDGLREEALFAQPNGMTVDEDGN---------FYIVDGFKGYCLRKLD 351 (409)
T ss_dssp EETTTTEEEEECTTCC--EEEEE-ECTTCCSCBCEEGGGCBCSSEEEEEECTTCC---------EEEEETTTTCEEEEEE
T ss_pred EeCCCCEEEEEecCCC--EEEEE-eCCCCCCcCCCcccccEeCCCeEEEEeCCCC---------EEEEeCCCCCEEEEEE
Confidence 5566789999997643 33332 221 3478999988876 888888 899999999
Q ss_pred ccCccccCCCc---ccc-------cccccceeEEEcCCCCceeccccCCCCCC
Q 019326 291 VRMAIKEKPLP---LAE-------AKTNSRLTCLAGSSTKSFKRPQIGDSAPK 333 (343)
Q Consensus 291 ~~~~~~~~~~~---~~~-------~~~~~~i~~~~~s~~~~~~~~~~~~~~~~ 333 (343)
+.++......- ... ...-.....+++++++.+.++......++
T Consensus 352 ~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir 404 (409)
T 3hrp_A 352 ILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIR 404 (409)
T ss_dssp TTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEE
T ss_pred CCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEE
Confidence 76653110000 000 00113578999999998888887766544
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.48 E-value=3.4e-12 Score=108.45 Aligned_cols=260 Identities=12% Similarity=0.039 Sum_probs=168.0
Q ss_pred CceEEEeeC-C----CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee----------CCCeEEEEE
Q 019326 52 GTAAASGGT-D----DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS----------ADGFVSIFD 116 (343)
Q Consensus 52 ~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~----------~dg~i~iwd 116 (343)
+..+++... + +.|.++|..+++.+..+... ..+ .+.++|++ ++++++. .++.|.++|
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-~~P--gia~SpDg-----k~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-FLP--HPVAAEDG-----SFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-SSC--EEEECTTS-----SCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-CCC--ceEECCCC-----CEEEEEeccccccccCCCCCEEEEEE
Confidence 455555444 2 69999999999999999876 455 89999999 6676665 467999999
Q ss_pred CCCcceeeeeeec-------cccEEEEEEecCCCEEEEEeC--CCeEEEEEccCCceeEEEEcCCcceEEEEeCCC-CEE
Q 019326 117 ADPFVLLTSVKVH-------KKGVNDLAVHHSGKLALTVGR--DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSG-EKF 186 (343)
Q Consensus 117 ~~~~~~~~~~~~~-------~~~v~~i~~~~~~~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 186 (343)
..+++.+.++... ......++|+|++++++++.. ++.|.+.|+.+++.+.....+.. ....|++ ..+
T Consensus 156 ~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~ 232 (426)
T 3c75_H 156 PVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVF 232 (426)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEE
T ss_pred CCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEE
Confidence 9999988887642 123456899999999998874 58899999999998877776543 2333333 333
Q ss_pred EEE-eCCcEEEEEcccceeEEE----ec-CCcce-EEeeec-CCCeEEEEeCCCcEEEEECCCCcee--EEecc------
Q 019326 187 FMV-TEEKVGIHQAEDAKLLCE----LD-GKKRI-LCAAPG-ENGVLFTGGEDRSITAWDTNSGKVA--YCIED------ 250 (343)
Q Consensus 187 ~~~-~~~~i~~~d~~~~~~~~~----~~-~~~~i-~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~------ 250 (343)
++. .++.+.+.+..+++.... +. ...++ ..+.+. ++..++..+..+.|.+.|....... ..+..
T Consensus 233 v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 233 YMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAER 312 (426)
T ss_dssp EEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTG
T ss_pred EEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccc
Confidence 333 677777777755554422 11 11111 122334 3455555567889999998755421 11110
Q ss_pred c---ccccEEEEEEEecCCCCCCCCCCeEEEEEcC----------CCcEEEEeccCccccCCCcccccccccceeEEEcC
Q 019326 251 A---HSARVKGIVVLTKNDGGSTAENPYLVASASS----------DGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGS 317 (343)
Q Consensus 251 ~---h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s 317 (343)
. .......+++++++. .++.... ++.|.+.|+.+.+.. ..+..+.....++++
T Consensus 313 ~~g~~p~g~~~va~s~dg~---------rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv-----~~I~vg~~P~gia~s 378 (426)
T 3c75_H 313 ADDWRPGGWQQTAYHRQSD---------RIYLLVDQRDEWKHKAASRFVVVLNAETGERI-----NKIELGHEIDSINVS 378 (426)
T ss_dssp GGTEEECSSSCEEEEGGGT---------EEEEEEEECCTTCTTSCEEEEEEEETTTCCEE-----EEEEEEEEECEEEEC
T ss_pred ccccccCCceeeEEcCCCC---------EEEEEecccccccccCCCCEEEEEECCCCeEE-----EEEECCCCcCeEEEc
Confidence 0 011122367888876 5555431 357999999987533 334444568899999
Q ss_pred CCCc-eecccc-CCCCCCCcc
Q 019326 318 STKS-FKRPQI-GDSAPKGEE 336 (343)
Q Consensus 318 ~~~~-~~~~~~-~~~~~~~~~ 336 (343)
+|++ +++... .++.+-..+
T Consensus 379 pDg~~~lyv~n~~s~~VsVID 399 (426)
T 3c75_H 379 QDAEPLLYALSAGTQTLHIYD 399 (426)
T ss_dssp CSSSCEEEEEETTTTEEEEEE
T ss_pred cCCCEEEEEEcCCCCeEEEEE
Confidence 9998 665554 455444433
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.47 E-value=1.5e-14 Score=122.12 Aligned_cols=194 Identities=14% Similarity=0.122 Sum_probs=115.7
Q ss_pred ecCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeec
Q 019326 50 VSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVH 129 (343)
Q Consensus 50 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 129 (343)
..++.+++++.||.|+.||..+|+.+..+.. ..+.+..+..++ ..+++++.||.|+.||..+++.+..+..+
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g-----~~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEE-----PAFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC----------CCEEECTTTCCEEEC-----CCSEECSCC
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCC-----CEEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 3478899999999999999999999988865 334444445555 57888889999999999988887766543
Q ss_pred cc-cEE-EEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEE
Q 019326 130 KK-GVN-DLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLC 206 (343)
Q Consensus 130 ~~-~v~-~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~ 206 (343)
.. .+. +..+. .+..+++++.++.++.||.++|+.......... ..++|++..++++ .++.+..||.++++.+.
T Consensus 79 ~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 79 IPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp HHHHHTTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred CccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 21 110 01111 345678888899999999999988766554432 3455677777777 88999999999998877
Q ss_pred EecCCcceEEeeecC----CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEE
Q 019326 207 ELDGKKRILCAAPGE----NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKG 258 (343)
Q Consensus 207 ~~~~~~~i~~~~~~~----~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~ 258 (343)
.+.... .....+.+ ++.+++++.+|.|+.||..+++.+.+.. ...++..
T Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~--~~~pv~~ 207 (369)
T 2hz6_A 155 NATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN--YASPVVA 207 (369)
T ss_dssp EEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE--CSSCEEE
T ss_pred eEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec--CCCceEE
Confidence 665221 12222222 1578888999999999999999988877 4445543
No 225
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.47 E-value=3.6e-10 Score=92.46 Aligned_cols=223 Identities=14% Similarity=0.087 Sum_probs=148.6
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG 162 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~ 162 (343)
..-..+..|+++.+ .++++...++.|..||..+++. ..+. ....+.+++++++++++++ . ++.|.+||..++
T Consensus 12 ~~~~Egp~w~~~~~----~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g 83 (297)
T 3g4e_A 12 CRCGESPVWEEVSN----SLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQ 83 (297)
T ss_dssp CSBEEEEEEETTTT----EEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTT
T ss_pred CccccCCeEECCCC----EEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCC
Confidence 44566889998652 5777777889999999987654 3333 4568999999999995554 4 568999999887
Q ss_pred ceeEEEEcC-----CcceEEEEeCCCCEEEEE-eC---------CcEEEEEccc-ceeEEEecCCcceEEeeecC-CCeE
Q 019326 163 RRSFYHKIG-----KEASLIKFDGSGEKFFMV-TE---------EKVGIHQAED-AKLLCELDGKKRILCAAPGE-NGVL 225 (343)
Q Consensus 163 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~---------~~i~~~d~~~-~~~~~~~~~~~~i~~~~~~~-~~~l 225 (343)
+........ ..+..++++|+|+++++. .. ....+|.+.. ++.............+++++ ++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEE
T ss_pred cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEE
Confidence 754443322 236779999999977765 32 2345555542 33333333344567888884 4544
Q ss_pred -EEEeCCCcEEEEEC--CCCce-----eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcccc
Q 019326 226 -FTGGEDRSITAWDT--NSGKV-----AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKE 297 (343)
Q Consensus 226 -~~~~~dg~i~i~d~--~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 297 (343)
++.+.++.|.+||+ .++.. +..+. .+...+.++++.+++. +.++...++.|..||..+++..
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~-~~~~~p~g~~~d~~G~---------lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE-KEEQIPDGMCIDAEGK---------LWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECC-GGGCEEEEEEEBTTSC---------EEEEEETTTEEEEECTTTCCEE
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECC-CCCCCCCeeEECCCCC---------EEEEEcCCCEEEEEcCCCceEE
Confidence 55666889999987 45543 22333 3445778899988776 7777777889999999876422
Q ss_pred CCCcccccccc-cceeEEEcC-CCCceeccccC
Q 019326 298 KPLPLAEAKTN-SRLTCLAGS-STKSFKRPQIG 328 (343)
Q Consensus 298 ~~~~~~~~~~~-~~i~~~~~s-~~~~~~~~~~~ 328 (343)
. .+... ..+++++|. ++++.+.....
T Consensus 234 ~-----~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 234 Q-----TVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp E-----EEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred E-----EEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 2 22222 468999998 77665544443
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.46 E-value=3.4e-11 Score=102.34 Aligned_cols=254 Identities=13% Similarity=0.086 Sum_probs=169.5
Q ss_pred CeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEee----------CCCeEEEEEcCCCeeeeE
Q 019326 10 KFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGG----------TDDTIHLYDLSTSSSLGA 77 (343)
Q Consensus 10 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~----------~dg~i~iwd~~~~~~~~~ 77 (343)
+.|.++|..+ .+.+.++..-..+ .++++ +++|+++. .++.|.++|..+++.+..
T Consensus 99 ~~VsVID~~t------------~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~ 164 (426)
T 3c75_H 99 TQQFVIDGST------------GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIAD 164 (426)
T ss_dssp EEEEEEETTT------------TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEE
T ss_pred CeEEEEECCC------------CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEE
Confidence 6899999887 3334444433445 78888 77777775 467899999999998887
Q ss_pred eccC-C-----CCCeEEEEEeCCCCCCCCceEEEeeC--CCeEEEEECCCcceeeeeeeccccEEEEEEecCC-CEEEEE
Q 019326 78 IHHH-E-----SSSVTSLAFYTPQNLSVPRNLFSTSA--DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG-KLALTV 148 (343)
Q Consensus 78 ~~~~-~-----~~~v~~l~~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~ 148 (343)
+... . ......+.|+|++ ++++++.. ++.|.+.|+.+++.+.++..... ....|++ ..+++.
T Consensus 165 I~v~g~~r~~~g~~P~~~~~spDG-----k~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 165 IELPDAPRFLVGTYQWMNALTPDN-----KNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMN 235 (426)
T ss_dssp EEETTCCCCCBSCCGGGSEECTTS-----SEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEE
T ss_pred EECCCccccccCCCcceEEEcCCC-----CEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEE
Confidence 7521 0 1235678999999 78887764 57999999999998888874221 2333433 566777
Q ss_pred eCCCeEEEEEccCCceeEEE----EcCC-c-ceEEEEeCCCCEEEEE-eCCcEEEEEcccceeE--EEecC---------
Q 019326 149 GRDDCLAMVNLVRGRRSFYH----KIGK-E-ASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLL--CELDG--------- 210 (343)
Q Consensus 149 ~~d~~i~~wd~~~~~~~~~~----~~~~-~-~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~--~~~~~--------- 210 (343)
+.||.+.+.++.+++..... .... + ...+.+.+++..++.. ..+.+.+.|....... ..+..
T Consensus 236 ~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g 315 (426)
T 3c75_H 236 CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADD 315 (426)
T ss_dssp ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGT
T ss_pred cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccc
Confidence 78888888888655544221 1111 1 1235678888877777 7788999998654422 11110
Q ss_pred --CcceEEeeec-CCCeEEEEeC----------CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEE
Q 019326 211 --KKRILCAAPG-ENGVLFTGGE----------DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLV 277 (343)
Q Consensus 211 --~~~i~~~~~~-~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l 277 (343)
......+.++ +++.+++... ++.|.++|..+.+.+.++. -.....+++|+++++. ++
T Consensus 316 ~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~--vg~~P~gia~spDg~~--------~l 385 (426)
T 3c75_H 316 WRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE--LGHEIDSINVSQDAEP--------LL 385 (426)
T ss_dssp EEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE--EEEEECEEEECCSSSC--------EE
T ss_pred cccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE--CCCCcCeEEEccCCCE--------EE
Confidence 0111124555 4455554432 3579999999999999997 3346889999888641 56
Q ss_pred EEEc-CCCcEEEEeccCccc
Q 019326 278 ASAS-SDGVICVWDVRMAIK 296 (343)
Q Consensus 278 ~s~~-~dg~i~vwd~~~~~~ 296 (343)
++.. .++.|.++|+.+.+.
T Consensus 386 yv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 386 YALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp EEEETTTTEEEEEETTTCCE
T ss_pred EEEcCCCCeEEEEECCCCCE
Confidence 6665 699999999998753
No 227
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.46 E-value=1.2e-09 Score=87.91 Aligned_cols=219 Identities=11% Similarity=0.038 Sum_probs=143.2
Q ss_pred CCeEEEEec--CceE-EEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC
Q 019326 43 SPITTVAVS--GTAA-ASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP 119 (343)
Q Consensus 43 ~~v~~l~~~--~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 119 (343)
..+..++++ ++.| ++-...+.|..++.+.......+... ......+++.+.+. ..+++-...+.|.+++++.
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~-~~~p~~ia~d~~~~----~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD-LGSPEGIALDHLGR----TIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT-CCCEEEEEEETTTT----EEEEEETTTTEEEEEETTS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC-CCCccEEEEEecCC----eEEEEECCCCEEEEEEcCC
Confidence 356788887 4444 45555789999999865443333333 35788999998651 4555555678999999875
Q ss_pred cceeeeeeeccccEEEEEEecCCCEEEEEeC---CCeEEEEEccCCceeEEEEc-CCcceEEEEeCCCCEEEEE--eCCc
Q 019326 120 FVLLTSVKVHKKGVNDLAVHHSGKLALTVGR---DDCLAMVNLVRGRRSFYHKI-GKEASLIKFDGSGEKFFMV--TEEK 193 (343)
Q Consensus 120 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~ 193 (343)
................++++|++..|+.+.. .+.|..+++........... ...+..+++++++..++.+ ..+.
T Consensus 111 ~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 3322222222246789999997655555543 36888888764332222212 2457889999988877777 6688
Q ss_pred EEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCC
Q 019326 194 VGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 194 i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
|.+++.........+........++...+.++++....+.|..+|..+++.+..+..+......++++.|++.
T Consensus 191 I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 9999987655444444333445666654445555556789999999999988888733223577888887764
No 228
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.44 E-value=6.5e-11 Score=107.57 Aligned_cols=265 Identities=15% Similarity=0.185 Sum_probs=169.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC----------CCe-EEEEecCceEEEeeCCCeEEEEEcC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL----------SPI-TTVAVSGTAAASGGTDDTIHLYDLS 70 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~----------~~v-~~l~~~~~~l~s~~~dg~i~iwd~~ 70 (343)
.|++++.++.|+.+|..+ ++.. .++.... ..+ ..+++.+..++.++.|+.|..+|..
T Consensus 68 ~vyv~~~~~~v~AlD~~t-------G~~~-----W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~ 135 (668)
T 1kv9_A 68 VIYTSMSWSRVIAVDAAS-------GKEL-----WRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAK 135 (668)
T ss_dssp EEEEEEGGGEEEEEETTT-------CCEE-----EEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETT
T ss_pred EEEEECCCCeEEEEECCC-------Chhc-----eEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECC
Confidence 366777888898888876 3222 1111110 011 1234457788889999999999999
Q ss_pred CCeeeeEeccCCC---CCeEE-EEEeCCCCCCCCceEEEeeC------CCeEEEEECCCcceeeeeeecc----------
Q 019326 71 TSSSLGAIHHHES---SSVTS-LAFYTPQNLSVPRNLFSTSA------DGFVSIFDADPFVLLTSVKVHK---------- 130 (343)
Q Consensus 71 ~~~~~~~~~~~~~---~~v~~-l~~~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~---------- 130 (343)
+|+.+..+..... ..+.+ -... ++ .++.+.. +|.|+.+|.++++.+..+....
T Consensus 136 tG~~~W~~~~~~~~~~~~~~~~P~v~-~~------~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~ 208 (668)
T 1kv9_A 136 TGKAIWSQQTTDPAKPYSITGAPRVV-KG------KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHP 208 (668)
T ss_dssp TCCEEEEEECSCTTSSCBCCSCCEEE-TT------EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSH
T ss_pred CCCEeeeeccCCCCCcceecCCCEEE-CC------EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccccc
Confidence 9999988765311 11111 0111 33 5555543 5899999999999988875311
Q ss_pred ---------------------ccEEEEEEecCCCEEEEEeCCC-------------------eEEEEEccCCceeEEEEc
Q 019326 131 ---------------------KGVNDLAVHHSGKLALTVGRDD-------------------CLAMVNLVRGRRSFYHKI 170 (343)
Q Consensus 131 ---------------------~~v~~i~~~~~~~~l~~~~~d~-------------------~i~~wd~~~~~~~~~~~~ 170 (343)
.....++++|+...++.+..++ .|..+|.++++.......
T Consensus 209 ~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~ 288 (668)
T 1kv9_A 209 ELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQV 288 (668)
T ss_dssp HHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES
T ss_pred ccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeec
Confidence 0112468888888888888776 399999999998887765
Q ss_pred C----------CcceEEEEeCCCC---EEEEE-eCCcEEEEEcccceeEEEecCCc-------------ce---------
Q 019326 171 G----------KEASLIKFDGSGE---KFFMV-TEEKVGIHQAEDAKLLCELDGKK-------------RI--------- 214 (343)
Q Consensus 171 ~----------~~~~~~~~~~~~~---~~~~~-~~~~i~~~d~~~~~~~~~~~~~~-------------~i--------- 214 (343)
. .++....+..+++ .++.+ .++.+.++|..+++.+...+... ++
T Consensus 289 ~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~ 368 (668)
T 1kv9_A 289 TPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEK 368 (668)
T ss_dssp STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSS
T ss_pred CCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccC
Confidence 3 1222233334564 45555 89999999999999875433110 00
Q ss_pred ---------------EEeeecC-CCeEEE------------------------------------EeCCCcEEEEECCCC
Q 019326 215 ---------------LCAAPGE-NGVLFT------------------------------------GGEDRSITAWDTNSG 242 (343)
Q Consensus 215 ---------------~~~~~~~-~~~l~~------------------------------------~~~dg~i~i~d~~~~ 242 (343)
..+++++ .++++. ...+|.|..||+.++
T Consensus 369 ~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG 448 (668)
T 1kv9_A 369 EPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQ 448 (668)
T ss_dssp SCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTT
T ss_pred CeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCC
Confidence 0123332 223332 113488999999999
Q ss_pred ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc
Q 019326 243 KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK 296 (343)
Q Consensus 243 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 296 (343)
+.+.+.. +..+.....+...+. +++.++.||.|+.||.++++.
T Consensus 449 ~~~W~~~--~~~~~~~~~~~t~gg---------~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 449 KAAWKVP--YPTHWNGGTLSTAGN---------LVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp EEEEEEE--ESSSCCCCEEEETTT---------EEEEECTTSEEEEEETTTCCE
T ss_pred cEEEEcc--CCCCCcCceeEeCCC---------EEEEECCcccchhhhhhcChh
Confidence 9998887 333344334444554 899999999999999998853
No 229
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.41 E-value=2.5e-11 Score=101.41 Aligned_cols=229 Identities=10% Similarity=0.042 Sum_probs=146.7
Q ss_pred eEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee----------CCCeEEEEECCCcceeeeeeecc--
Q 019326 63 TIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS----------ADGFVSIFDADPFVLLTSVKVHK-- 130 (343)
Q Consensus 63 ~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~-- 130 (343)
.|.++|..+++.+..+... ..+ .+.++|++ ++++++. .++.|.+||+.+++.+.++....
T Consensus 47 ~vsvID~~t~~v~~~i~vG-~~P--~i~~spDg-----~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~ 118 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGA-FLS--LAVAGHSG-----SDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP 118 (368)
T ss_dssp EEEEEETTTTEEEEEEEEC-TTC--EEEECTTS-----SCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC
T ss_pred eEEEEECCCCeEEEEEeCC-CCC--ceEECCCC-----CEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc
Confidence 8889999999999999876 555 79999999 6777765 47899999999999999987541
Q ss_pred -----ccEEEEEEecCCCEEEEEeC--CCeEEE--EEccCCceeEEEEcCCc--------ceEEEEeCCCCE--------
Q 019326 131 -----KGVNDLAVHHSGKLALTVGR--DDCLAM--VNLVRGRRSFYHKIGKE--------ASLIKFDGSGEK-------- 185 (343)
Q Consensus 131 -----~~v~~i~~~~~~~~l~~~~~--d~~i~~--wd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-------- 185 (343)
.....++++|+|++++++.. +..+.+ +|+.+ +.....+.. -.-+.++++++.
T Consensus 119 ~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~ 195 (368)
T 1mda_H 119 RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAA 195 (368)
T ss_dssp SCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSS
T ss_pred ccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccc
Confidence 23567999999999998875 467888 88876 222222111 001122222222
Q ss_pred -----------------------------EEEE-eCCcEEEEEcccce--eEEEecCC-----------cceEEeeec-C
Q 019326 186 -----------------------------FFMV-TEEKVGIHQAEDAK--LLCELDGK-----------KRILCAAPG-E 221 (343)
Q Consensus 186 -----------------------------~~~~-~~~~i~~~d~~~~~--~~~~~~~~-----------~~i~~~~~~-~ 221 (343)
++.. . +.+.+.|..... .+..+... .....+.++ +
T Consensus 196 ~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~d 274 (368)
T 1mda_H 196 PAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKN 274 (368)
T ss_dssp CCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETT
T ss_pred cccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCC
Confidence 2222 3 445555554321 22211100 001114455 4
Q ss_pred CCeEEEEeC---------CCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc-CCCcEEEEec
Q 019326 222 NGVLFTGGE---------DRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS-SDGVICVWDV 291 (343)
Q Consensus 222 ~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~-~dg~i~vwd~ 291 (343)
++.++.+.. ++.+.++|+.+++.+..+. . .....+|++++++.. ++++.. .++.|.++|+
T Consensus 275 g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~-v-g~~p~gi~~s~Dg~~--------l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 275 TDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS-N-GHDSDAIIAAQDGAS--------DNYANSAGTEVLDIYDA 344 (368)
T ss_dssp TTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE-E-EEEECEEEECCSSSC--------EEEEEETTTTEEEEEES
T ss_pred CCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEE-C-CCCcceEEECCCCCE--------EEEEccCCCCeEEEEEC
Confidence 555665432 2356699999999999887 2 236899999998751 566666 5999999999
Q ss_pred cCccccCCCcccccccccceeEEEcCC
Q 019326 292 RMAIKEKPLPLAEAKTNSRLTCLAGSS 318 (343)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~i~~~~~s~ 318 (343)
.+.+... .+..+.....+++.+
T Consensus 345 ~t~kvv~-----~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 345 ASDQDQS-----SVELDKGPESLSVQN 366 (368)
T ss_dssp SSCEEEE-----ECCCCSCCCEEECCC
T ss_pred CCCcEEE-----EEECCCCCCEEEeec
Confidence 9986433 334444455565543
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.41 E-value=1.1e-09 Score=95.33 Aligned_cols=238 Identities=11% Similarity=0.112 Sum_probs=169.0
Q ss_pred EEEEe-----cCceEEEeeC-CCeEEEEEcCCCeeeeEeccCCCCCeEEEEE-e-CCCCCCCCceEEEee----------
Q 019326 46 TTVAV-----SGTAAASGGT-DDTIHLYDLSTSSSLGAIHHHESSSVTSLAF-Y-TPQNLSVPRNLFSTS---------- 107 (343)
Q Consensus 46 ~~l~~-----~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~-~-~~~~~~~~~~l~s~~---------- 107 (343)
..+++ +|++++.... ++.|.+.|+++.++...+.-........+++ . |++ +++++++
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~-----~~v~~~~~~~~p~~~dg 164 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRS-----NYVFCNGEDETPLVNDG 164 (595)
T ss_dssp EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBC-----SEEEEEECSCEESSCSS
T ss_pred cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCC-----cEEEEecccccccCCCC
Confidence 45556 3566666554 5679999999999888554321356888988 4 788 6787774
Q ss_pred --------CCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCC---------------------------
Q 019326 108 --------ADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD--------------------------- 152 (343)
Q Consensus 108 --------~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~--------------------------- 152 (343)
.++.+.+.|.++++...++.--. ....++++|+|+++++.+.+.
T Consensus 165 ~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~ 243 (595)
T 1fwx_A 165 TNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK 243 (595)
T ss_dssp SSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH
T ss_pred cccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeE
Confidence 35689999999999888887433 456788999999998888553
Q ss_pred -----------eEEEEEccC--Cce-eEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccce------------e
Q 019326 153 -----------CLAMVNLVR--GRR-SFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAK------------L 204 (343)
Q Consensus 153 -----------~i~~wd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~------------~ 204 (343)
.|.+.|.++ ++. +.....+..+.++.++|||++++++ .+..+.++|+.+.+ .
T Consensus 244 ~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 244 AIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp HHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred eccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccce
Confidence 377888877 555 5667777888999999999999988 78999999999763 4
Q ss_pred EEEecCCcceEEeeecCCCeE-EEEeCCCcEEEEECCC----------CceeEEecccccccEEEEEEEecCCCCCCCCC
Q 019326 205 LCELDGKKRILCAAPGENGVL-FTGGEDRSITAWDTNS----------GKVAYCIEDAHSARVKGIVVLTKNDGGSTAEN 273 (343)
Q Consensus 205 ~~~~~~~~~i~~~~~~~~~~l-~~~~~dg~i~i~d~~~----------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 273 (343)
...+.-......++|++++.+ ++...|+.|.+||+.+ .+.+.++. .|-.+-. ..++ . .....+|
T Consensus 324 ~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid-V~yqpGh-~~~~-~--g~t~~~D 398 (595)
T 1fwx_A 324 VAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD-VHYQPGH-LKTV-M--GETLDAT 398 (595)
T ss_dssp EECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE-CSSCEEE-EEET-T--TTSTTCC
T ss_pred EEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEee-ccccccc-ceec-c--ceEeCCC
Confidence 455555567888889854344 4566799999999976 55666666 4433221 1111 1 1234677
Q ss_pred CeEEEEEcC---CCcE----------EEEeccCc
Q 019326 274 PYLVASASS---DGVI----------CVWDVRMA 294 (343)
Q Consensus 274 ~~~l~s~~~---dg~i----------~vwd~~~~ 294 (343)
|++|+++.. |+.+ .++|+..+
T Consensus 399 Gk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 399 NDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp SSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred CCEEEEcCCCCccccccCCCCCCCcceEEEcCCC
Confidence 779988753 4331 88999544
No 231
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.40 E-value=1e-09 Score=91.03 Aligned_cols=216 Identities=10% Similarity=-0.010 Sum_probs=140.5
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCce
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR 164 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 164 (343)
......|+|++. .++++...++.|..||..+++. ..+. ....+.+++++++++++++. . ..|.+||..+++.
T Consensus 50 ~~egp~~~~~~~----~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 50 LGEGPTFDPASG----TAWWFNILERELHELHLASGRK-TVHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVL 121 (326)
T ss_dssp BEEEEEEETTTT----EEEEEEGGGTEEEEEETTTTEE-EEEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCE
T ss_pred CCcCCeEeCCCC----EEEEEECCCCEEEEEECCCCcE-EEEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcE
Confidence 456788999752 5777777889999999987653 3333 35679999999999877654 3 4599999988875
Q ss_pred eEEEEcC-----CcceEEEEeCCCCEEEEEe-C------CcEEEEEcccceeEEEecCCcceEEeeecC-CCeE-EEEeC
Q 019326 165 SFYHKIG-----KEASLIKFDGSGEKFFMVT-E------EKVGIHQAEDAKLLCELDGKKRILCAAPGE-NGVL-FTGGE 230 (343)
Q Consensus 165 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~------~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l-~~~~~ 230 (343)
....... ..+..++++|+|+++++.. + +.|..++ +++.............+++++ ++.+ ++.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETT
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECC
Confidence 4433321 2467899999999776653 2 3455555 454433323333466788884 4555 44456
Q ss_pred CCcEEEEECC--CC-c-----eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcc
Q 019326 231 DRSITAWDTN--SG-K-----VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPL 302 (343)
Q Consensus 231 dg~i~i~d~~--~~-~-----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 302 (343)
++.|.+||+. ++ + .+..+. .....+.++++.+++. ++++...++.|.+||.. +....
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~-~~~~~p~gi~~d~~G~---------lwva~~~~~~v~~~d~~-g~~~~---- 264 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDST-GIKGGMDGSVCDAEGH---------IWNARWGEGAVDRYDTD-GNHIA---- 264 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECT-TSSSEEEEEEECTTSC---------EEEEEETTTEEEEECTT-CCEEE----
T ss_pred CCEEEEEEcccccCCcccCceEEEECC-CCCCCCCeeEECCCCC---------EEEEEeCCCEEEEECCC-CCEEE----
Confidence 7899999986 55 3 122332 3345567888877775 67666667889999984 32111
Q ss_pred ccccc-ccceeEEEcC-CCCceeccc
Q 019326 303 AEAKT-NSRLTCLAGS-STKSFKRPQ 326 (343)
Q Consensus 303 ~~~~~-~~~i~~~~~s-~~~~~~~~~ 326 (343)
.+.. ...+.+++|+ +++..+...
T Consensus 265 -~i~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 265 -RYEVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp -EEECSCSBEEEEEEESTTSCEEEEE
T ss_pred -EEECCCCCcEEEEEecCCCCEEEEE
Confidence 1111 2358999998 776655433
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.40 E-value=2.3e-10 Score=95.70 Aligned_cols=240 Identities=10% Similarity=0.019 Sum_probs=149.9
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEee--CCCeEEEEEcCCCeeeeEec-------cCCCCCeEEEEEeCCCCCCCC
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGG--TDDTIHLYDLSTSSSLGAIH-------HHESSSVTSLAFYTPQNLSVP 100 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~--~dg~i~iwd~~~~~~~~~~~-------~~~~~~v~~l~~~~~~~~~~~ 100 (343)
++.+..+. ..+..++++ ++.+++.. .++.++||.+.+++.. .+. .+ ...+..+++.+++
T Consensus 9 ~~~v~~~~---~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~-~~~p~gv~~d~~g----- 78 (343)
T 2qe8_A 9 LEVVAELS---LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIIT-FDTVLGIKSDGNG----- 78 (343)
T ss_dssp CEEEEEES---SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCC-CSCEEEEEECSSS-----
T ss_pred eEEEEEcC---CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccc-eeEeeEEEEcCCC-----
Confidence 34444433 678999998 66777753 2343566666555433 221 23 4689999999988
Q ss_pred ceEEEeeC-----CCeEEEEECCCcceeeeeeec------cccEEEEEEecCCCE-EEEEe---CCCeEEEEEccCCcee
Q 019326 101 RNLFSTSA-----DGFVSIFDADPFVLLTSVKVH------KKGVNDLAVHHSGKL-ALTVG---RDDCLAMVNLVRGRRS 165 (343)
Q Consensus 101 ~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~------~~~v~~i~~~~~~~~-l~~~~---~d~~i~~wd~~~~~~~ 165 (343)
+++++-.. ++.|.+||+.+++.+..+... ...+..+++++++.. +++.. .++.|.+||+.+++..
T Consensus 79 ~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~ 158 (343)
T 2qe8_A 79 IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAA 158 (343)
T ss_dssp EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEE
T ss_pred cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEE
Confidence 55444333 578999999988877766532 235688999986544 45544 5789999999877654
Q ss_pred EEEEc------------------------------CCcceEEEEeCCCCEEEEE-e-CCcEEEEEcccc---e-------
Q 019326 166 FYHKI------------------------------GKEASLIKFDGSGEKFFMV-T-EEKVGIHQAEDA---K------- 203 (343)
Q Consensus 166 ~~~~~------------------------------~~~~~~~~~~~~~~~~~~~-~-~~~i~~~d~~~~---~------- 203 (343)
..... ...+..++++|+++.++.+ . ...+..++.... .
T Consensus 159 r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (343)
T 2qe8_A 159 RVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG 238 (343)
T ss_dssp EECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred EEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence 33211 0124679999999988887 3 335555553211 0
Q ss_pred -eEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc
Q 019326 204 -LLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS 281 (343)
Q Consensus 204 -~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 281 (343)
.+..+.+......++++ +++++++...++.|.+||..+++........+...+.++++.+++. ++++.+
T Consensus 239 ~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~---------l~v~~~ 309 (343)
T 2qe8_A 239 SKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGY---------LYFDCN 309 (343)
T ss_dssp TTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSC---------EEEEEC
T ss_pred cceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCc---------EEEEeC
Confidence 01111122234557776 4567777778899999998556643333312345688999987765 777776
Q ss_pred CCCcEEEEe
Q 019326 282 SDGVICVWD 290 (343)
Q Consensus 282 ~dg~i~vwd 290 (343)
..+.+.+|.
T Consensus 310 ~~~~~~~f~ 318 (343)
T 2qe8_A 310 QLHHSAPLN 318 (343)
T ss_dssp CGGGSGGGB
T ss_pred ccccccccc
Confidence 555544443
No 233
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.40 E-value=3.2e-10 Score=101.00 Aligned_cols=232 Identities=14% Similarity=0.077 Sum_probs=153.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC--CCeEE-EEecCceEEEeeC------CCeEEEEEcCCC
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL--SPITT-VAVSGTAAASGGT------DDTIHLYDLSTS 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~-l~~~~~~l~s~~~------dg~i~iwd~~~~ 72 (343)
+|++++.|+.|..+|..+ ++..-.... ..+. ..+.+ ....+..++.++. ++.|..+|..++
T Consensus 117 ~v~v~~~dg~l~alD~~t-------G~~~W~~~~---~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG 186 (571)
T 2ad6_A 117 QIVKKQANGHLLALDAKT-------GKINWEVEV---CDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTG 186 (571)
T ss_dssp EEEEECTTSEEEEEETTT-------CCEEEEEEC---CCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTC
T ss_pred EEEEEeCCCEEEEEECCC-------CCEEEEecC---CCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCC
Confidence 467888899999999877 333222111 1111 01211 1123556666655 799999999999
Q ss_pred eeeeEeccCCCCC-------------------------------------e-EEEEEeCCCCCCCCceEEEeeCC-----
Q 019326 73 SSLGAIHHHESSS-------------------------------------V-TSLAFYTPQNLSVPRNLFSTSAD----- 109 (343)
Q Consensus 73 ~~~~~~~~~~~~~-------------------------------------v-~~l~~~~~~~~~~~~~l~s~~~d----- 109 (343)
+.+..+... ... + ..+++.+.. ..++.+..+
T Consensus 187 ~~~W~~~~~-~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~-----g~vy~~~g~~~~~~ 260 (571)
T 2ad6_A 187 ELKWRAFAT-GSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKL-----NLFYYGSGNPAPWN 260 (571)
T ss_dssp CEEEEEESS-SCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTT-----TEEEEECCCCSCSC
T ss_pred cEEEEEccC-CCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCC-----CeEEEECCCCcccc
Confidence 998877643 111 0 124555554 455555432
Q ss_pred -----------CeEEEEECCCcceeeeeeecc----------ccEEEEEEecCCC---EEEEEeCCCeEEEEEccCCcee
Q 019326 110 -----------GFVSIFDADPFVLLTSVKVHK----------KGVNDLAVHHSGK---LALTVGRDDCLAMVNLVRGRRS 165 (343)
Q Consensus 110 -----------g~i~iwd~~~~~~~~~~~~~~----------~~v~~i~~~~~~~---~l~~~~~d~~i~~wd~~~~~~~ 165 (343)
+.|..+|.++++.+..++... .++. +....+|+ .++.++.+|.++++|..+++.+
T Consensus 261 ~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~ 339 (571)
T 2ad6_A 261 ETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLI 339 (571)
T ss_dssp GGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred CCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEE
Confidence 369999999999988876321 2221 22334673 5778889999999999999987
Q ss_pred EEEEcCCcc----------------------------------------eEEEEeCCCCEEEEE-e--------------
Q 019326 166 FYHKIGKEA----------------------------------------SLIKFDGSGEKFFMV-T-------------- 190 (343)
Q Consensus 166 ~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~-~-------------- 190 (343)
........+ ..++++|+...+++. .
T Consensus 340 w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~ 419 (571)
T 2ad6_A 340 VAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYR 419 (571)
T ss_dssp EEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCC
T ss_pred eeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccc
Confidence 766543210 235788887777665 2
Q ss_pred -----------------------CCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeE
Q 019326 191 -----------------------EEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAY 246 (343)
Q Consensus 191 -----------------------~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~ 246 (343)
++.+..+|..+++.+.++....++....+. .++.++.++.||.|+.||.++++.+.
T Consensus 420 ~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 420 AGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp TTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred cCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEE
Confidence 367899999999998887754443332222 56788889999999999999999999
Q ss_pred Eecc
Q 019326 247 CIED 250 (343)
Q Consensus 247 ~~~~ 250 (343)
++..
T Consensus 500 ~~~~ 503 (571)
T 2ad6_A 500 NFKM 503 (571)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8873
No 234
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.39 E-value=1.4e-10 Score=106.25 Aligned_cols=236 Identities=13% Similarity=0.155 Sum_probs=145.0
Q ss_pred CCCCCeEEEEec--CceEEE-----eeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC--
Q 019326 40 AHLSPITTVAVS--GTAAAS-----GGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG-- 110 (343)
Q Consensus 40 ~h~~~v~~l~~~--~~~l~s-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg-- 110 (343)
+|...+..++|+ |++||. |+....|++||+.+++.+.... . ......++|+ ++ +.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~-~~k~~~~~Ws-Dg-----~~l~y~~~~~~~ 197 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-K-DVKFSGISWL-GN-----EGFFYSSYDKPD 197 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-E-EEESCCCEEE-TT-----TEEEEEESSCCC
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-C-CceeccEEEe-CC-----CEEEEEEecCcc
Confidence 455678888998 777773 3334679999999998654321 1 1113567899 88 6788777764
Q ss_pred -----------eEEEEECCCcce----eeeeee-ccccEEEEEEecCCCEEEEEeC----CCeEEEEEccCCc-eeEEEE
Q 019326 111 -----------FVSIFDADPFVL----LTSVKV-HKKGVNDLAVHHSGKLALTVGR----DDCLAMVNLVRGR-RSFYHK 169 (343)
Q Consensus 111 -----------~i~iwd~~~~~~----~~~~~~-~~~~v~~i~~~~~~~~l~~~~~----d~~i~~wd~~~~~-~~~~~~ 169 (343)
.|++|++.+.+. +..... |.....++.|+|++++|+.... ++.|+++|+.++. ......
T Consensus 198 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~ 277 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ 277 (693)
T ss_dssp -------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE
T ss_pred cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe
Confidence 399999976542 222233 4445788999999998765443 3589999998764 222222
Q ss_pred cC-CcceEEEEeCCCCEEEEE-e----CCcEEEEEccccee---EEEecCCcceEEeeecCCCeEEE-EeCCC--cEEEE
Q 019326 170 IG-KEASLIKFDGSGEKFFMV-T----EEKVGIHQAEDAKL---LCELDGKKRILCAAPGENGVLFT-GGEDR--SITAW 237 (343)
Q Consensus 170 ~~-~~~~~~~~~~~~~~~~~~-~----~~~i~~~d~~~~~~---~~~~~~~~~i~~~~~~~~~~l~~-~~~dg--~i~i~ 237 (343)
.. ...... +++++..++.. . ...|..+++.++.. .....+...+..+.. .++.|+. ...++ .|++|
T Consensus 278 ~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~-~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 278 GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHS-GSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEE-ETTEEEEEEEETTEEEEEEE
T ss_pred CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEE-ECCEEEEEEEECCeeEEEEE
Confidence 22 223333 66777766555 2 25788899887654 223334444434333 4455544 44454 68899
Q ss_pred ECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcC---CCcEEEEeccCc
Q 019326 238 DTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASS---DGVICVWDVRMA 294 (343)
Q Consensus 238 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~---dg~i~vwd~~~~ 294 (343)
|+.. .....+.......+..+.+++++.. ++++.+. -+.|..||+.++
T Consensus 356 d~~g-~~~~~l~~p~~~~~~~~~~~~d~~~--------l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 356 DYEG-KRVREVALPGLGSVSGFNGKHDDPA--------LYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp CTTS-CEEEEECCSSSSEEEECCCCTTCSC--------EEEEEECSSSCCEEEEECTTTC
T ss_pred ECCC-CeeEEeecCCCceEEeeecCCCCCE--------EEEEecCCCCCCEEEEEECCCC
Confidence 9874 4455554234456666666655541 3333332 278999998765
No 235
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.38 E-value=3.2e-10 Score=101.03 Aligned_cols=270 Identities=14% Similarity=0.053 Sum_probs=166.9
Q ss_pred eeEEecc-CCeEEEEEe-ecCCCCCCCCcceeeEEeEE-ecCCC-----CCeEEEEecCceEEEeeCCCeEEEEEcCCCe
Q 019326 2 SLIAGSY-EKFIWGYKL-KPSNHYSSDQKTLTLTQLFS-YPAHL-----SPITTVAVSGTAAASGGTDDTIHLYDLSTSS 73 (343)
Q Consensus 2 ~l~~g~~-d~~i~vw~~-~~~~~~~~~~~~~~~~~~~~-~~~h~-----~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~ 73 (343)
+|++++. ++.|+.+|. .+ ++..-...... ...+. ..-..+++.+..++.++.|+.|..+|..+|+
T Consensus 64 ~vyv~~~~~~~v~AlD~~~t-------G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~ 136 (571)
T 2ad6_A 64 MMYVHSAFPNNTYALNLNDP-------GKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGK 136 (571)
T ss_dssp EEEEECSTTTCEEEEETTCT-------TSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCC
T ss_pred EEEEEeCCCCEEEEEeCCCC-------ccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCC
Confidence 3566676 788999998 66 33221111100 00000 0011234557788889999999999999999
Q ss_pred eeeEeccCCC----CCeEE-EEEeCCCCCCCCceEEEeeC------CCeEEEEECCCcceeeeeeecccc----------
Q 019326 74 SLGAIHHHES----SSVTS-LAFYTPQNLSVPRNLFSTSA------DGFVSIFDADPFVLLTSVKVHKKG---------- 132 (343)
Q Consensus 74 ~~~~~~~~~~----~~v~~-l~~~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~---------- 132 (343)
.+..+... . ..+.+ -... ++ .++.++. ++.|..+|.++++.+.++......
T Consensus 137 ~~W~~~~~-~~~~~~~~~~~P~v~-~g------~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~ 208 (571)
T 2ad6_A 137 INWEVEVC-DPKVGSTLTQAPFVA-KD------TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFN 208 (571)
T ss_dssp EEEEEECC-CGGGTCBCCSCCEEE-TT------EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTT
T ss_pred EEEEecCC-CCCccceeccCCEEE-CC------EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccc
Confidence 98877543 1 01211 1111 33 5555554 799999999999988877632111
Q ss_pred ----------------------------EEEEEEecCCCEEEEEeCC----------------CeEEEEEccCCceeEEE
Q 019326 133 ----------------------------VNDLAVHHSGKLALTVGRD----------------DCLAMVNLVRGRRSFYH 168 (343)
Q Consensus 133 ----------------------------v~~i~~~~~~~~l~~~~~d----------------~~i~~wd~~~~~~~~~~ 168 (343)
...+++.++...++.+..+ +.|..+|.++++.+...
T Consensus 209 ~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~ 288 (571)
T 2ad6_A 209 SANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGY 288 (571)
T ss_dssp TTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEE
T ss_pred cccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEe
Confidence 0135667766667666532 36999999999988776
Q ss_pred EcCC----------cceEEEEeCCCC---EEEEE-eCCcEEEEEcccceeEEEecCCc--------------ce------
Q 019326 169 KIGK----------EASLIKFDGSGE---KFFMV-TEEKVGIHQAEDAKLLCELDGKK--------------RI------ 214 (343)
Q Consensus 169 ~~~~----------~~~~~~~~~~~~---~~~~~-~~~~i~~~d~~~~~~~~~~~~~~--------------~i------ 214 (343)
.... ....+....+++ .++.+ .++.+.++|..+++.+...+... ++
T Consensus 289 ~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~ 368 (571)
T 2ad6_A 289 QKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFA 368 (571)
T ss_dssp ESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGC
T ss_pred cCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccC
Confidence 6431 122233334664 45555 78899999999999887765211 11
Q ss_pred --------------------EEeeecC-CCeEEEEe-------------------------------------CCCcEEE
Q 019326 215 --------------------LCAAPGE-NGVLFTGG-------------------------------------EDRSITA 236 (343)
Q Consensus 215 --------------------~~~~~~~-~~~l~~~~-------------------------------------~dg~i~i 236 (343)
..+++++ .+++++.. .+|.|..
T Consensus 369 ~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a 448 (571)
T 2ad6_A 369 TRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRA 448 (571)
T ss_dssp CCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEE
T ss_pred CCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEE
Confidence 1123332 24444432 3578999
Q ss_pred EECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcccc
Q 019326 237 WDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKE 297 (343)
Q Consensus 237 ~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 297 (343)
||..+++.+.++. +...+.+..+...+. .++.++.||.|+.||.++++..
T Consensus 449 ~D~~tG~~~W~~~--~~~~~~~~~~~t~gg---------~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 449 FDLTTGKAKWTKW--EKFAAWGGTLYTKGG---------LVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp ECTTTCCEEEEEE--ESSCCCSBCEEETTT---------EEEEECTTSEEEEEETTTCCEE
T ss_pred EECCCCCEEEEec--CCCCccceeEEECCC---------EEEEEcCCCeEEEEECCCCCEE
Confidence 9999999988887 333333333333333 7888999999999999998633
No 236
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.37 E-value=1.6e-09 Score=85.76 Aligned_cols=207 Identities=11% Similarity=-0.031 Sum_probs=148.1
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC--CCeEEEEECCCcceeeeeeeccc-cEEEEEEecCCCEEEEEe
Q 019326 73 SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA--DGFVSIFDADPFVLLTSVKVHKK-GVNDLAVHHSGKLALTVG 149 (343)
Q Consensus 73 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~-~v~~i~~~~~~~~l~~~~ 149 (343)
+.+.++..........+.|++++ .++++.+. ++.|.++|+.+++.+..+..... ....+++.. +...++.-
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg-----~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~ 83 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAEND-----TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVW 83 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTT-----EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEET
T ss_pred eEEEEEECCCCCCcccEEEeCCC-----eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEe
Confidence 44555543212346899999877 45555443 67999999999999888763222 233456653 23444445
Q ss_pred CCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCC---c---ceEEeeecCC
Q 019326 150 RDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGK---K---RILCAAPGEN 222 (343)
Q Consensus 150 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~---~---~i~~~~~~~~ 222 (343)
.++.+.++|..+.+.+..+..+ ......+++++..++++ .++.+.++|..+.+....+.-. . .++.+.+.++
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg 162 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYING 162 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT
T ss_pred cCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECC
Confidence 6899999999999988877766 22335566788888888 8889999999999988887722 2 3567777655
Q ss_pred CeEEEEeCCCcEEEEECCCCceeEEecccc------------cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 223 GVLFTGGEDRSITAWDTNSGKVAYCIEDAH------------SARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 223 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h------------~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
...+....++.|.+.|..+++.+..+..+. ....++|++++++. ++++++...+.|.+-+
T Consensus 163 ~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~--------~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 163 EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK--------RIFVTGKLWPKLFEIK 234 (266)
T ss_dssp EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT--------EEEEEETTCSEEEEEE
T ss_pred EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCC--------EEEEECCCCCeEEEEE
Confidence 444444467899999999999999887321 13568999999875 2778888889999999
Q ss_pred ccCc
Q 019326 291 VRMA 294 (343)
Q Consensus 291 ~~~~ 294 (343)
+...
T Consensus 235 l~~~ 238 (266)
T 2iwa_A 235 LHLV 238 (266)
T ss_dssp EEEC
T ss_pred Eecc
Confidence 9864
No 237
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.37 E-value=1.6e-09 Score=96.52 Aligned_cols=233 Identities=13% Similarity=0.082 Sum_probs=151.0
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEE-EEecCceEEEee------CCCeEEEEEcCCCee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITT-VAVSGTAAASGG------TDDTIHLYDLSTSSS 74 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~~~~~l~s~~------~dg~i~iwd~~~~~~ 74 (343)
+|++++.|+.|..+|..+ ++..-........ ....+++ -...+..+++++ .+|.|+.+|..+|+.
T Consensus 123 rV~v~t~dg~l~AlDa~T-------G~~~W~~~~~~~~-~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~ 194 (599)
T 1w6s_A 123 LILKTQLDGNVAALNAET-------GETVWKVENSDIK-VGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQ 194 (599)
T ss_dssp EEEEECTTSEEEEEETTT-------CCEEEEEECCCGG-GTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCE
T ss_pred EEEEEcCCCEEEEEECCC-------CCEEEeecCCCCC-ccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcE
Confidence 388899999999999877 3332221111100 0001111 112245666655 389999999999999
Q ss_pred eeEeccCCCCC-------------------------------------e-EEEEEeCCCCCCCCceEEEeeCC-------
Q 019326 75 LGAIHHHESSS-------------------------------------V-TSLAFYTPQNLSVPRNLFSTSAD------- 109 (343)
Q Consensus 75 ~~~~~~~~~~~-------------------------------------v-~~l~~~~~~~~~~~~~l~s~~~d------- 109 (343)
+..+... ... + ..+++.+.. .+++.+..+
T Consensus 195 ~W~~~~~-~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~-----g~vy~g~g~~~p~~~~ 268 (599)
T 1w6s_A 195 VWRAYAT-GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGT-----NLIYFGTGNPAPWNET 268 (599)
T ss_dssp EEEEESS-SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTT-----TEEEEECCCCSCSCGG
T ss_pred EEEEcCC-CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCC-----CEEEEeCCCCccccCc
Confidence 9887643 111 0 123455555 466666654
Q ss_pred ---------CeEEEEECCCcceeeeeeeccc----------cEEEEEEe-cCC---CEEEEEeCCCeEEEEEccCCceeE
Q 019326 110 ---------GFVSIFDADPFVLLTSVKVHKK----------GVNDLAVH-HSG---KLALTVGRDDCLAMVNLVRGRRSF 166 (343)
Q Consensus 110 ---------g~i~iwd~~~~~~~~~~~~~~~----------~v~~i~~~-~~~---~~l~~~~~d~~i~~wd~~~~~~~~ 166 (343)
+.|..+|.++++.+..++.... ++. +... .+| ..++.++.+|.++++|.++++.+.
T Consensus 269 ~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 269 MRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp GSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEee
Confidence 4899999999999888774321 222 2222 456 567778899999999999999877
Q ss_pred EEEcCCc----------------------------------------ceEEEEeCCCCEEEEE-----------------
Q 019326 167 YHKIGKE----------------------------------------ASLIKFDGSGEKFFMV----------------- 189 (343)
Q Consensus 167 ~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~----------------- 189 (343)
....... -..++++|+..++++.
T Consensus 348 ~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~ 427 (599)
T 1w6s_A 348 ANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKA 427 (599)
T ss_dssp EEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCT
T ss_pred cccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccC
Confidence 6553220 0235667766655442
Q ss_pred -----------------------eCCcEEEEEcccceeEEEecCCcceEEeee-cCCCeEEEEeCCCcEEEEECCCCcee
Q 019326 190 -----------------------TEEKVGIHQAEDAKLLCELDGKKRILCAAP-GENGVLFTGGEDRSITAWDTNSGKVA 245 (343)
Q Consensus 190 -----------------------~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~ 245 (343)
..+.+..||+.+++.+.+.+...+...-.+ ..+++++.++.||.++.||.++|+.+
T Consensus 428 g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 428 GQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp TSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 125788899999998888764333221111 25778888999999999999999999
Q ss_pred EEec
Q 019326 246 YCIE 249 (343)
Q Consensus 246 ~~~~ 249 (343)
.+++
T Consensus 508 W~~~ 511 (599)
T 1w6s_A 508 WKFK 511 (599)
T ss_dssp EEEE
T ss_pred EEee
Confidence 9887
No 238
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.35 E-value=4.1e-10 Score=92.53 Aligned_cols=229 Identities=14% Similarity=0.060 Sum_probs=147.8
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCe
Q 019326 74 SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDC 153 (343)
Q Consensus 74 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~ 153 (343)
.+..+... ........|+++++ .++++...++.|..|+.. ++ ...+..+...+..++++++|+++++...++.
T Consensus 36 ~~~~l~~~-~~~~egp~~~~~g~----~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 36 RLLTLYDQ-ATWSEGPAWWEAQR----TLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRA 108 (305)
T ss_dssp CCEEEECC-CSSEEEEEEEGGGT----EEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTE
T ss_pred ceEEEecC-CcCccCCeEeCCCC----EEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCE
Confidence 33444444 46678899999982 367788888999999984 44 4556666778899999999997776666789
Q ss_pred EEEEEccCCceeEEEEc-C----CcceEEEEeCCCCEEEE----Ee--------------CCcEEEEEcccceeEEEecC
Q 019326 154 LAMVNLVRGRRSFYHKI-G----KEASLIKFDGSGEKFFM----VT--------------EEKVGIHQAEDAKLLCELDG 210 (343)
Q Consensus 154 i~~wd~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~----~~--------------~~~i~~~d~~~~~~~~~~~~ 210 (343)
|..|+.. ++....... . ..+..++++++|+.+++ +. .+.|..+|..+++..... .
T Consensus 109 v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~ 186 (305)
T 3dr2_A 109 ITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D 186 (305)
T ss_dssp EEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E
T ss_pred EEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c
Confidence 9999986 543322211 1 23567999999998875 21 245777777666554433 3
Q ss_pred CcceEEeeecC-CCeEEEEeCC------CcEEEEECCCCceeE---EecccccccEEEEEEEecCCCCCCCCCCeEEEEE
Q 019326 211 KKRILCAAPGE-NGVLFTGGED------RSITAWDTNSGKVAY---CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASA 280 (343)
Q Consensus 211 ~~~i~~~~~~~-~~~l~~~~~d------g~i~i~d~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 280 (343)
......+++++ ++.|+.+... +.|.+|++..+. +. .+.......+..+++.+++. |..+
T Consensus 187 ~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~----------lwv~ 255 (305)
T 3dr2_A 187 LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGW----------LWSS 255 (305)
T ss_dssp ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSC----------EEEC
T ss_pred CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCC----------EEEe
Confidence 34567788884 5567666554 789999987554 21 11111233445677777664 4444
Q ss_pred cCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCC
Q 019326 281 SSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGD 329 (343)
Q Consensus 281 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~ 329 (343)
+.+| |.+|+.... .+..+.....+.+++|++++..+.....+
T Consensus 256 ~~~g-v~~~~~~g~------~~~~~~~~~~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 256 SGTG-VCVFDSDGQ------LLGHIPTPGTASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp CSSE-EEEECTTSC------EEEEEECSSCCCEEEECTTSCEEEEEETT
T ss_pred cCCc-EEEECCCCC------EEEEEECCCceeEEEEeCCCCEEEEEcCC
Confidence 4554 999998532 22223333358889999888766655544
No 239
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.34 E-value=1.8e-09 Score=96.35 Aligned_cols=233 Identities=15% Similarity=0.124 Sum_probs=147.0
Q ss_pred EecCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCC----CeE-EEEEeCCCCCCCCc-eEEEee------CCCeEEEEE
Q 019326 49 AVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESS----SVT-SLAFYTPQNLSVPR-NLFSTS------ADGFVSIFD 116 (343)
Q Consensus 49 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----~v~-~l~~~~~~~~~~~~-~l~s~~------~dg~i~iwd 116 (343)
++.+..++.++.|+.|..+|..+|+.+..+... .. .+. .-....+. ..++ .+++++ .++.|+.+|
T Consensus 114 a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~-~~~~~~~~~~sP~v~~~~--~~G~~~v~vg~~~~e~~~~g~v~alD 190 (582)
T 1flg_A 114 AIYGDKVFFGTLDASVVALNKNTGKVVWKKKFA-DHGAGYTMTGAPTIVKDG--KTGKVLLIHGSSGDEFGVVGRLFARD 190 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEEECS-CGGGTCBCCSCCEEEECT--TTCCEEEEECCBCGGGCCBCEEEEEC
T ss_pred EEECCEEEEEeCCCEEEEEECCCCCEEeeecCC-CCCcCcccccCCEEeCCC--cCCcEEEEEeccccccCCCCEEEEEE
Confidence 445778888999999999999999998887543 10 111 11111110 0002 566665 378999999
Q ss_pred CCCcceeeeeeeccccE-----------------------------------------EEEEEecCCCEEEEEeC-----
Q 019326 117 ADPFVLLTSVKVHKKGV-----------------------------------------NDLAVHHSGKLALTVGR----- 150 (343)
Q Consensus 117 ~~~~~~~~~~~~~~~~v-----------------------------------------~~i~~~~~~~~l~~~~~----- 150 (343)
..+++.+.........+ ..++++|....++.+..
T Consensus 191 ~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~ 270 (582)
T 1flg_A 191 PDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPW 270 (582)
T ss_dssp TTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSS
T ss_pred CCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcc
Confidence 99999887654211000 12456666667776653
Q ss_pred ---------------C----CeEEEEEccCCceeEEEEcCC----------cceEEEEe-CCCC---EEEEE-eCCcEEE
Q 019326 151 ---------------D----DCLAMVNLVRGRRSFYHKIGK----------EASLIKFD-GSGE---KFFMV-TEEKVGI 196 (343)
Q Consensus 151 ---------------d----~~i~~wd~~~~~~~~~~~~~~----------~~~~~~~~-~~~~---~~~~~-~~~~i~~ 196 (343)
| +.|..+|.++++......... ....+... .+++ .++.+ .++.+.+
T Consensus 271 ~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~ 350 (582)
T 1flg_A 271 NTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYV 350 (582)
T ss_dssp CGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEE
T ss_pred cCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEE
Confidence 2 689999999999888776531 11222222 4664 55666 8899999
Q ss_pred EEcccceeEEEecCCc--------------ce--------------------------------EEeeecC-CCeEEEEe
Q 019326 197 HQAEDAKLLCELDGKK--------------RI--------------------------------LCAAPGE-NGVLFTGG 229 (343)
Q Consensus 197 ~d~~~~~~~~~~~~~~--------------~i--------------------------------~~~~~~~-~~~l~~~~ 229 (343)
+|..+++.+..+.... ++ ..+++++ .+++++..
T Consensus 351 lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 351 VDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPA 430 (582)
T ss_dssp EETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEE
T ss_pred EECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEec
Confidence 9999999887665221 00 0122222 12343322
Q ss_pred ---------------------------------CCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeE
Q 019326 230 ---------------------------------EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYL 276 (343)
Q Consensus 230 ---------------------------------~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 276 (343)
.+|.|..||+.+++.+.+.. . ..++..-.....+. +
T Consensus 431 ~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~-~-~~~~~~g~~~tagg---------l 499 (582)
T 1flg_A 431 NHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHK-E-HLPLWAGVLATAGN---------L 499 (582)
T ss_dssp ECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEE-E-SSCCCSCCEEETTT---------E
T ss_pred hhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEec-C-CCCCcccceEeCCC---------E
Confidence 36889999999999988877 2 22322222222333 7
Q ss_pred EEEEcCCCcEEEEeccCcc
Q 019326 277 VASASSDGVICVWDVRMAI 295 (343)
Q Consensus 277 l~s~~~dg~i~vwd~~~~~ 295 (343)
++.++.||.++.||.++++
T Consensus 500 vf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 500 VFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp EEEECTTSEEEEEETTTCC
T ss_pred EEEECCCCcEEEEECCCCC
Confidence 8889999999999999986
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.32 E-value=3.2e-09 Score=96.56 Aligned_cols=235 Identities=14% Similarity=0.160 Sum_probs=155.7
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEE-EEecCceEEEeeC------CCeEEEEEcCCCee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITT-VAVSGTAAASGGT------DDTIHLYDLSTSSS 74 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~~~~~l~s~~~------dg~i~iwd~~~~~~ 74 (343)
+|++++.|+.|..+|..+ ++..-...... ......+.+ ....+..++.+.. +|.|..+|..+|+.
T Consensus 119 ~v~v~~~dg~l~alD~~t-------G~~~W~~~~~~-~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~ 190 (668)
T 1kv9_A 119 KVYVGTLDGRLIALDAKT-------GKAIWSQQTTD-PAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKL 190 (668)
T ss_dssp EEEEECTTSEEEEEETTT-------CCEEEEEECSC-TTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred EEEEEcCCCEEEEEECCC-------CCEeeeeccCC-CCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcE
Confidence 477888999999999887 33222111100 000011111 1122555666543 58999999999999
Q ss_pred eeEeccCC--CC----------------------------CeEEEEEeCCCCCCCCceEEEeeCCC--------------
Q 019326 75 LGAIHHHE--SS----------------------------SVTSLAFYTPQNLSVPRNLFSTSADG-------------- 110 (343)
Q Consensus 75 ~~~~~~~~--~~----------------------------~v~~l~~~~~~~~~~~~~l~s~~~dg-------------- 110 (343)
+..+.... .. ....+++.+.. .+++.++.++
T Consensus 191 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~-----~~vy~~~~~g~~w~~~~~~~~~gd 265 (668)
T 1kv9_A 191 AWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL-----DLLYVGTGNGSPWNREVRSPGGGD 265 (668)
T ss_dssp EEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT-----TEEEEECCCEESSCHHHHSTTCCC
T ss_pred EEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC-----CEEEEeCCCCCccccCCCCCCCCC
Confidence 98875310 00 11236777776 5777777766
Q ss_pred -----eEEEEECCCcceeeeeeec--c-------ccEEEEEEecCCC---EEEEEeCCCeEEEEEccCCceeEEEEcCCc
Q 019326 111 -----FVSIFDADPFVLLTSVKVH--K-------KGVNDLAVHHSGK---LALTVGRDDCLAMVNLVRGRRSFYHKIGKE 173 (343)
Q Consensus 111 -----~i~iwd~~~~~~~~~~~~~--~-------~~v~~i~~~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 173 (343)
.|..+|.++++.+..++.. . .+.....+..+++ .++.++.+|.++++|.++|+.+........
T Consensus 266 ~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~ 345 (668)
T 1kv9_A 266 NLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKV 345 (668)
T ss_dssp CTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCC
T ss_pred ceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccc
Confidence 4999999999999888742 1 2233333334664 688999999999999999998744332210
Q ss_pred -------------------------------------ceEEEEeCCCCEEEEE---------------------------
Q 019326 174 -------------------------------------ASLIKFDGSGEKFFMV--------------------------- 189 (343)
Q Consensus 174 -------------------------------------~~~~~~~~~~~~~~~~--------------------------- 189 (343)
-..++++|+...+++.
T Consensus 346 ~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 425 (668)
T 1kv9_A 346 TWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGF 425 (668)
T ss_dssp CSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCG
T ss_pred ccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccc
Confidence 0126778877766652
Q ss_pred ----------eCCcEEEEEcccceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 190 ----------TEEKVGIHQAEDAKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 190 ----------~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
.++.|..||+.+++.+.+.....+.....+. .+++++.++.||.++.||.++++.+..+.
T Consensus 426 ~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 426 ADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp GGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEec
Confidence 1267999999999998887754443322222 67889999999999999999999999887
No 241
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.29 E-value=6e-10 Score=93.12 Aligned_cols=227 Identities=8% Similarity=0.009 Sum_probs=146.1
Q ss_pred eEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEee----------CCCeEEEEEcCCCeeeeEe
Q 019326 11 FIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGG----------TDDTIHLYDLSTSSSLGAI 78 (343)
Q Consensus 11 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~----------~dg~i~iwd~~~~~~~~~~ 78 (343)
.|.++|..+ .+.+.++..-..+ .++++ +.+++++. .++.|.+||+.+++.+..+
T Consensus 47 ~vsvID~~t------------~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I 112 (368)
T 1mda_H 47 ENWVSCAGC------------GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI 112 (368)
T ss_dssp EEEEEETTT------------TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE
T ss_pred eEEEEECCC------------CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEE
Confidence 788888876 3444444443455 68888 77888775 3788999999999999988
Q ss_pred ccCC------CCCeEEEEEeCCCCCCCCceEEEeeC--CCeEEE--EECCCcceeeeeee---------c---------c
Q 019326 79 HHHE------SSSVTSLAFYTPQNLSVPRNLFSTSA--DGFVSI--FDADPFVLLTSVKV---------H---------K 130 (343)
Q Consensus 79 ~~~~------~~~v~~l~~~~~~~~~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~---------~---------~ 130 (343)
.... ......++++|++ ++++++.. +..|.+ +|..+ +.++.. + .
T Consensus 113 ~v~~~~~~~~g~~P~~ia~SpDG-----k~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~d 184 (368)
T 1mda_H 113 ELPDAPRFSVGPRVHIIGNCASS-----ACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCP 184 (368)
T ss_dssp EETTSCSCCBSCCTTSEEECTTS-----SCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCT
T ss_pred ECCCccccccCCCcceEEEcCCC-----CEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCC
Confidence 5320 0235679999999 78887764 467888 88865 222211 0 0
Q ss_pred ccEEEEEE--------------------------ecCCCEEEEEeCCCeEEEEEccCCceeE--EEEc-----------C
Q 019326 131 KGVNDLAV--------------------------HHSGKLALTVGRDDCLAMVNLVRGRRSF--YHKI-----------G 171 (343)
Q Consensus 131 ~~v~~i~~--------------------------~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~-----------~ 171 (343)
+.+..+.. .+++..++..+. +.+.+.|........ .... +
T Consensus 185 g~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p 263 (368)
T 1mda_H 185 ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRS 263 (368)
T ss_dssp TSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEE
T ss_pred CCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccccccc
Confidence 00000110 222233333333 566666665432111 1111 1
Q ss_pred CcceEEEEeCCCCEEEEE-e-C--------CcEEEEEcccceeEEEecCCcceEEeeecC-CC-eEEEEe-CCCcEEEEE
Q 019326 172 KEASLIKFDGSGEKFFMV-T-E--------EKVGIHQAEDAKLLCELDGKKRILCAAPGE-NG-VLFTGG-EDRSITAWD 238 (343)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~-~-~--------~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~-~dg~i~i~d 238 (343)
.....+.++|+++.++++ . . +.+.++|+.+.+.+..+........+.+++ ++ ++++.. .++.|.++|
T Consensus 264 ~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 264 AGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp CSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred CcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 112227899999998876 4 3 367799999999999888666788899984 44 566666 599999999
Q ss_pred CCCCceeEEecccccccEEEEEEE
Q 019326 239 TNSGKVAYCIEDAHSARVKGIVVL 262 (343)
Q Consensus 239 ~~~~~~~~~~~~~h~~~v~~~~~~ 262 (343)
+.+++.+.++. .. .....+++.
T Consensus 344 ~~t~kvv~~I~-vg-~~P~~i~~~ 365 (368)
T 1mda_H 344 AASDQDQSSVE-LD-KGPESLSVQ 365 (368)
T ss_dssp SSSCEEEEECC-CC-SCCCEEECC
T ss_pred CCCCcEEEEEE-CC-CCCCEEEee
Confidence 99999999987 33 334555554
No 242
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.27 E-value=3.7e-09 Score=94.28 Aligned_cols=248 Identities=12% Similarity=0.125 Sum_probs=154.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCC--CeE-EEEecCc------eEEEee------CCCeEEE
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLS--PIT-TVAVSGT------AAASGG------TDDTIHL 66 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~-~l~~~~~------~l~s~~------~dg~i~i 66 (343)
+|++++.|+.|..+|..+ ++..-.... ..+.. .+. .-...+. .+++++ .+|.|..
T Consensus 119 ~v~~~t~dg~l~AlD~~T-------G~~~W~~~~---~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~a 188 (582)
T 1flg_A 119 KVFFGTLDASVVALNKNT-------GKVVWKKKF---ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFA 188 (582)
T ss_dssp EEEEEETTTEEEEEESSS-------CCEEEEEEC---SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEE
T ss_pred EEEEEeCCCEEEEEECCC-------CCEEeeecC---CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEE
Confidence 467888899999999887 333221111 11110 111 0111222 666665 3789999
Q ss_pred EEcCCCeeeeEeccCCCCCe-----------------------------------------EEEEEeCCCCCCCCceEEE
Q 019326 67 YDLSTSSSLGAIHHHESSSV-----------------------------------------TSLAFYTPQNLSVPRNLFS 105 (343)
Q Consensus 67 wd~~~~~~~~~~~~~~~~~v-----------------------------------------~~l~~~~~~~~~~~~~l~s 105 (343)
+|..+|+.+...... ...+ ..+++.|.. .+++.
T Consensus 189 lD~~tG~~~W~~~~~-~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~-----g~vyv 262 (582)
T 1flg_A 189 RDPDTGEEIWMRPFV-EGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAET-----NTIIV 262 (582)
T ss_dssp ECTTTCCEEEEEESS-TTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTT-----TEEEE
T ss_pred EECCCCCEEeecCCC-ccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCC-----CEEEE
Confidence 999999988876432 1111 123445554 45555
Q ss_pred eeC--------------------C----CeEEEEECCCcceeeeeee--cc--------ccEEEEEEe-cCC---CEEEE
Q 019326 106 TSA--------------------D----GFVSIFDADPFVLLTSVKV--HK--------KGVNDLAVH-HSG---KLALT 147 (343)
Q Consensus 106 ~~~--------------------d----g~i~iwd~~~~~~~~~~~~--~~--------~~v~~i~~~-~~~---~~l~~ 147 (343)
+.. | +.|..+|.++++.+..++. |. .++. +... .+| ..++.
T Consensus 263 ~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~ 341 (582)
T 1flg_A 263 GAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAH 341 (582)
T ss_dssp EECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEE
T ss_pred eCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEE
Confidence 542 2 6899999999999988763 21 1222 2222 456 37888
Q ss_pred EeCCCeEEEEEccCCceeEEEEcCCcc----------------------------------------------eEEEEeC
Q 019326 148 VGRDDCLAMVNLVRGRRSFYHKIGKEA----------------------------------------------SLIKFDG 181 (343)
Q Consensus 148 ~~~d~~i~~wd~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~ 181 (343)
++.+|.++++|.++++.+........+ ..++++|
T Consensus 342 ~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp 421 (582)
T 1flg_A 342 ADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQ 421 (582)
T ss_dssp ECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECT
T ss_pred ECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECC
Confidence 999999999999999987665543210 1245666
Q ss_pred CCCEEEEE-e---------------------------------CCcEEEEEcccceeEEEecCCcceEEeee-cCCCeEE
Q 019326 182 SGEKFFMV-T---------------------------------EEKVGIHQAEDAKLLCELDGKKRILCAAP-GENGVLF 226 (343)
Q Consensus 182 ~~~~~~~~-~---------------------------------~~~i~~~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~ 226 (343)
+...+++. . .+.+..||+.+++.+.+.....+...-.. ..+++++
T Consensus 422 ~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf 501 (582)
T 1flg_A 422 DTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVF 501 (582)
T ss_dssp TTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEE
T ss_pred CCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEE
Confidence 65555543 2 46788999999999888774433322111 1577888
Q ss_pred EEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCC
Q 019326 227 TGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 227 ~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
.|+.||.++.||.++|+.+.++..+....-.-+.+..++.
T Consensus 502 ~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 502 TGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred EECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence 8999999999999999999998832221112245545543
No 243
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.27 E-value=7.8e-10 Score=92.46 Aligned_cols=228 Identities=9% Similarity=-0.045 Sum_probs=145.7
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeC--CCeEEEEECCCcceeeee-------eeccccEEEEEEecCCCEEEEEeC----
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSA--DGFVSIFDADPFVLLTSV-------KVHKKGVNDLAVHHSGKLALTVGR---- 150 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~-------~~~~~~v~~i~~~~~~~~l~~~~~---- 150 (343)
..+..+++++++ +.+++... ++.++||.+.+++.. .+ ..+...+..++++++++++++-..
T Consensus 17 ~~p~~va~~~~g-----~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~ 90 (343)
T 2qe8_A 17 LAPGNITLTPDG-----RLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSK 90 (343)
T ss_dssp SCEEEEEECTTS-----CEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHT
T ss_pred CCcceEEECCCC-----CEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcC
Confidence 578899999998 67777542 342455554444422 22 124467999999999876665433
Q ss_pred -CCeEEEEEccCCceeEEEEcC-------CcceEEEEeCCCCEEEEE-e----CCcEEEEEcccceeEEEecCC------
Q 019326 151 -DDCLAMVNLVRGRRSFYHKIG-------KEASLIKFDGSGEKFFMV-T----EEKVGIHQAEDAKLLCELDGK------ 211 (343)
Q Consensus 151 -d~~i~~wd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~----~~~i~~~d~~~~~~~~~~~~~------ 211 (343)
++.|.+||+.+++.+.....+ ..+..+++++++..++++ . ++.|.+||+.+++..+.+..+
T Consensus 91 ~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 91 SVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPE 170 (343)
T ss_dssp SCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred CCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccc
Confidence 578999999998866666553 235789999876666555 3 578999999888766654320
Q ss_pred ------------------------cceEEeeecC-CCeEEEEeCCC-cEEEEECC---CCc-----eeE--Eeccccccc
Q 019326 212 ------------------------KRILCAAPGE-NGVLFTGGEDR-SITAWDTN---SGK-----VAY--CIEDAHSAR 255 (343)
Q Consensus 212 ------------------------~~i~~~~~~~-~~~l~~~~~dg-~i~i~d~~---~~~-----~~~--~~~~~h~~~ 255 (343)
..+..+++++ ++.|+.+..++ .+..++.. .+. ... ... ++...
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~ 249 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-SEKPI 249 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCS
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCC
Confidence 1246788874 45677666555 55555432 111 000 111 23345
Q ss_pred EEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 256 VKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 256 v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
...+++.+++. ++++...++.|.+||..++.. ..+........+.++++.+++.+.+.....+
T Consensus 250 pdgia~d~~G~---------l~va~~~~~~V~~~d~~~G~~---~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 250 CDGISIDKDHN---------IYVGDLAHSAIGVITSADRAY---KLLVTDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp CSCEEECTTCC---------EEEEEGGGTEEEEEETTTTEE---EEEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred CceEEECCCCC---------EEEEccCCCeEEEEECCCCCE---EEEEECCceecCCeeEECCCCcEEEEeCccc
Confidence 56788877765 888888999999999844421 1122222234588999999988877766544
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.27 E-value=7.6e-10 Score=96.43 Aligned_cols=259 Identities=12% Similarity=0.070 Sum_probs=174.5
Q ss_pred EEEeeCCCeEEEEEcCCCeeeeEecc---------------------------------C-----CCCCeEEEEEeC---
Q 019326 55 AASGGTDDTIHLYDLSTSSSLGAIHH---------------------------------H-----ESSSVTSLAFYT--- 93 (343)
Q Consensus 55 l~s~~~dg~i~iwd~~~~~~~~~~~~---------------------------------~-----~~~~v~~l~~~~--- 93 (343)
|.||+..|.++|+-+.+++.+..+.- + ..+.......+.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 78899999999998887776654410 0 012222344444
Q ss_pred --CCCCCCCceEEEeeC-CCeEEEEECCCcceeeeeeec-cccEEEEEE-e-cCCCEEEEEeC-----------------
Q 019326 94 --PQNLSVPRNLFSTSA-DGFVSIFDADPFVLLTSVKVH-KKGVNDLAV-H-HSGKLALTVGR----------------- 150 (343)
Q Consensus 94 --~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~-~~~v~~i~~-~-~~~~~l~~~~~----------------- 150 (343)
++ ++++.... ++.|.+.|++++++...+... ......+++ . |+++++++++.
T Consensus 98 ~~DG-----~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~ 172 (595)
T 1fwx_A 98 KYDG-----RFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVAN 172 (595)
T ss_dssp EEEE-----EEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGG
T ss_pred CcCC-----CEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccc
Confidence 45 56665554 567999999999988866432 245778887 5 89999988852
Q ss_pred -CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEEe-CC------------------------------------
Q 019326 151 -DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMVT-EE------------------------------------ 192 (343)
Q Consensus 151 -d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------------------------------ 192 (343)
++.+.++|..+.+.......+.....++++|++++++++. +.
T Consensus 173 ~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 173 YVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred cCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 4679999999999888888877788899999999998883 21
Q ss_pred --cEEEEEccc--cee-EEEecCCcceEEeeecC-CCeEE-EEeCCCcEEEEECCCCc------------eeEEeccccc
Q 019326 193 --KVGIHQAED--AKL-LCELDGKKRILCAAPGE-NGVLF-TGGEDRSITAWDTNSGK------------VAYCIEDAHS 253 (343)
Q Consensus 193 --~i~~~d~~~--~~~-~~~~~~~~~i~~~~~~~-~~~l~-~~~~dg~i~i~d~~~~~------------~~~~~~~~h~ 253 (343)
.+.+.|.++ ++. +..++-.....++.+++ +++++ ++..+.+|.++|+.+.+ ...++. -.
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--vG 330 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--LG 330 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--CC
T ss_pred ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--CC
Confidence 256666665 333 44554444555677774 55554 45568999999998653 334444 45
Q ss_pred ccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc-----cCCCcccccccccce------eEEEcCCCCce
Q 019326 254 ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK-----EKPLPLAEAKTNSRL------TCLAGSSTKSF 322 (343)
Q Consensus 254 ~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-----~~~~~~~~~~~~~~i------~~~~~s~~~~~ 322 (343)
.....++|++++. ..++.-.|+.|.+||+.+... .....+.....+... ..+..++||++
T Consensus 331 ~gP~h~aF~~dG~---------aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~ 401 (595)
T 1fwx_A 331 LGPLHTAFDGRGN---------AYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDW 401 (595)
T ss_dssp SCEEEEEECTTSE---------EEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSE
T ss_pred CCcceEEECCCCe---------EEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCE
Confidence 6678999998874 777888999999999987310 001122222222222 23456899999
Q ss_pred eccccCC
Q 019326 323 KRPQIGD 329 (343)
Q Consensus 323 ~~~~~~~ 329 (343)
+++...-
T Consensus 402 l~~~Nk~ 408 (595)
T 1fwx_A 402 LVCLSKF 408 (595)
T ss_dssp EEEEESC
T ss_pred EEEcCCC
Confidence 8765543
No 245
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.26 E-value=8.9e-09 Score=86.78 Aligned_cols=214 Identities=13% Similarity=0.086 Sum_probs=143.1
Q ss_pred ceEEEeeCCCeEEEEECCCc----ceeeeee-------eccccEEEEEEecCCCEEEEEeCC------CeEEEEEccCCc
Q 019326 101 RNLFSTSADGFVSIFDADPF----VLLTSVK-------VHKKGVNDLAVHHSGKLALTVGRD------DCLAMVNLVRGR 163 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~~----~~~~~~~-------~~~~~v~~i~~~~~~~~l~~~~~d------~~i~~wd~~~~~ 163 (343)
.+++.+..++.|+++|+.+. +.+.+++ ........+.+.|+| .++++..+ |.|.++|.++.+
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~ 175 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE 175 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe
Confidence 45666777899999999654 5555552 011245667889999 77766655 789999999999
Q ss_pred eeEEEEcCCc----ceEEEEeCCCCEEEEEe--------------------CCcEEEEEcccceeEEEecCC---cceEE
Q 019326 164 RSFYHKIGKE----ASLIKFDGSGEKFFMVT--------------------EEKVGIHQAEDAKLLCELDGK---KRILC 216 (343)
Q Consensus 164 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~--------------------~~~i~~~d~~~~~~~~~~~~~---~~i~~ 216 (343)
.+.....+.. ...+.|+|+++.++++. .+.|.+||+.+++.+.++... .....
T Consensus 176 v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~ 255 (462)
T 2ece_A 176 PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALE 255 (462)
T ss_dssp EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEE
T ss_pred EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccce
Confidence 8877765422 33477899999888884 789999999999888888743 33445
Q ss_pred eee--cC-CCeEEEEe------CCCcEEEEECCCCc--eeEE--ecccc----------------cccEEEEEEEecCCC
Q 019326 217 AAP--GE-NGVLFTGG------EDRSITAWDTNSGK--VAYC--IEDAH----------------SARVKGIVVLTKNDG 267 (343)
Q Consensus 217 ~~~--~~-~~~l~~~~------~dg~i~i~d~~~~~--~~~~--~~~~h----------------~~~v~~~~~~~~~~~ 267 (343)
+.| ++ ++++++++ .+++|.+|....++ ..+. +. .. ......|.++++++
T Consensus 256 i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~-~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGr- 333 (462)
T 2ece_A 256 LRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIP-AEPLEGNLPEILKPFKAVPPLVTDIDISLDDK- 333 (462)
T ss_dssp EEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEEC-CEECCSSCCGGGGGGTEECCCCCCEEECTTSC-
T ss_pred eEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCC-CccccccccccccccccCCCceeEEEECCCCC-
Confidence 545 53 55665555 56788877665442 1111 11 10 13467788888776
Q ss_pred CCCCCCCeEEEEEc-CCCcEEEEeccCccccCCCccccccccc---------------ceeEEEcCCCCceecccc
Q 019326 268 GSTAENPYLVASAS-SDGVICVWDVRMAIKEKPLPLAEAKTNS---------------RLTCLAGSSTKSFKRPQI 327 (343)
Q Consensus 268 ~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~---------------~i~~~~~s~~~~~~~~~~ 327 (343)
+|..+. ..+.|.++|+.... .+..+.....++ ....+++++|++++.+..
T Consensus 334 --------fLYVSnrg~d~VavfdV~d~~--~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 334 --------FLYLSLWGIGEVRQYDISNPF--KPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp --------EEEEEETTTTEEEEEECSSTT--SCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred --------EEEEEeCCCCEEEEEEecCCC--CcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 666655 46899999997432 122222233221 257899999999887766
No 246
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.26 E-value=5.7e-09 Score=93.02 Aligned_cols=269 Identities=13% Similarity=0.062 Sum_probs=163.3
Q ss_pred eeEEecc-CCeEEEEEe-ecCCCCCCCCcceeeEEeE-EecCC-----CCCeEEEEe--cCce----EEEeeCCCeEEEE
Q 019326 2 SLIAGSY-EKFIWGYKL-KPSNHYSSDQKTLTLTQLF-SYPAH-----LSPITTVAV--SGTA----AASGGTDDTIHLY 67 (343)
Q Consensus 2 ~l~~g~~-d~~i~vw~~-~~~~~~~~~~~~~~~~~~~-~~~~h-----~~~v~~l~~--~~~~----l~s~~~dg~i~iw 67 (343)
+|++++. ++.|..+|. .+ ++..-..... ..... ......+++ .+.. ++.++.|+.|..+
T Consensus 64 ~vyv~~~~~~~v~AlD~~~t-------G~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~Al 136 (599)
T 1w6s_A 64 KMYIHTSFPNNTFALGLDDP-------GTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAAL 136 (599)
T ss_dssp EEEEECSTTTCEEEEETTCT-------TSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEE
T ss_pred EEEEEeCCCCEEEEEeCCCC-------CcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEE
Confidence 3566776 788989998 66 3222111110 00000 000122455 4444 8888899999999
Q ss_pred EcCCCeeeeEeccCCC----CCeEE-EEEeCCCCCCCCceEEEee------CCCeEEEEECCCcceeeeeeecccc----
Q 019326 68 DLSTSSSLGAIHHHES----SSVTS-LAFYTPQNLSVPRNLFSTS------ADGFVSIFDADPFVLLTSVKVHKKG---- 132 (343)
Q Consensus 68 d~~~~~~~~~~~~~~~----~~v~~-l~~~~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~---- 132 (343)
|..+|+.+...... . ..+.+ -.+. ++ .+++++ .+|.|+.+|.++++.+..+......
T Consensus 137 Da~TG~~~W~~~~~-~~~~~~~~~ssP~v~-~g------~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~ 208 (599)
T 1w6s_A 137 NAETGETVWKVENS-DIKVGSTLTIAPYVV-KD------KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLL 208 (599)
T ss_dssp ETTTCCEEEEEECC-CGGGTCBCCSCCEEE-TT------EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHT
T ss_pred ECCCCCEEEeecCC-CCCccceeecCCEEE-CC------EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccc
Confidence 99999998877543 1 01211 1111 33 555555 3899999999999998877642211
Q ss_pred ---------------------------------E-EEEEEecCCCEEEEEeCC----------------CeEEEEEccCC
Q 019326 133 ---------------------------------V-NDLAVHHSGKLALTVGRD----------------DCLAMVNLVRG 162 (343)
Q Consensus 133 ---------------------------------v-~~i~~~~~~~~l~~~~~d----------------~~i~~wd~~~~ 162 (343)
+ ..+++.+....++.+..+ +.|..+|.+++
T Consensus 209 ~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG 288 (599)
T 1w6s_A 209 LASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTG 288 (599)
T ss_dssp BCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTC
T ss_pred cccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCC
Confidence 0 134566777777777665 38999999999
Q ss_pred ceeEEEEcCCc----------ceEEEEe-CCC---CEEEEE-eCCcEEEEEcccceeEEEecCCc--------------c
Q 019326 163 RRSFYHKIGKE----------ASLIKFD-GSG---EKFFMV-TEEKVGIHQAEDAKLLCELDGKK--------------R 213 (343)
Q Consensus 163 ~~~~~~~~~~~----------~~~~~~~-~~~---~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~--------------~ 213 (343)
+.......... ...+... .++ ..++.+ .++.+.++|..+++.+....... +
T Consensus 289 ~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p 368 (599)
T 1w6s_A 289 EAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQP 368 (599)
T ss_dssp CEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCE
T ss_pred ceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCce
Confidence 98877665421 1223332 567 355556 88999999999999887654110 1
Q ss_pred e--------------------------EEeeecC-CCeEEEE---------------------------------e----
Q 019326 214 I--------------------------LCAAPGE-NGVLFTG---------------------------------G---- 229 (343)
Q Consensus 214 i--------------------------~~~~~~~-~~~l~~~---------------------------------~---- 229 (343)
+ ..+++++ .+++++. +
T Consensus 369 ~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~ 448 (599)
T 1w6s_A 369 VRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQN 448 (599)
T ss_dssp EECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTT
T ss_pred eeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCccc
Confidence 1 0112221 1122211 1
Q ss_pred --CCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc
Q 019326 230 --EDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK 296 (343)
Q Consensus 230 --~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 296 (343)
..|.|..||+.+++.+.+.. +..+..+-.+...+. +++.++.||.|+.||.++++.
T Consensus 449 ~~~~G~l~A~D~~tG~~~W~~~--~~~~~~~g~~~tagg---------~vf~gt~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 449 YEGLGQIKAYNAITGDYKWEKM--ERFAVWGGTMATAGD---------LVFYGTLDGYLKARDSDTGDL 506 (599)
T ss_dssp TBCCEEEEEECTTTCCEEEEEE--ESSCCCSBCEEETTT---------EEEEECTTSEEEEEETTTCCE
T ss_pred CCCcCeEEEEECCCCCEEeEec--CCCCccCcceEecCC---------EEEEECCCCeEEEEECCCCCE
Confidence 35789999999999988876 222222111222333 788899999999999999863
No 247
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.26 E-value=6.5e-08 Score=90.19 Aligned_cols=263 Identities=11% Similarity=0.121 Sum_probs=171.1
Q ss_pred eEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEec-cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcce
Q 019326 45 ITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIH-HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL 122 (343)
Q Consensus 45 v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 122 (343)
|.++... ...|..++.++-|..|+..+++...... .. ...|.++...+++ .|..|+.++-+..||..+++.
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~-~~~i~~i~~d~~g------~lwigt~~~Gl~~~~~~~~~~ 247 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILG-TKQIQAILQQSPT------RIWVATEGAGLFLINPKTKEI 247 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC-----CCCEEEEEEEETT------EEEEEEBSSCEEEEETTTTEE
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCC-CCeeEEEEEcCCC------CEEEEECCCCeEEEeCCCCeE
Confidence 8888887 5667777766558899987765443221 23 4678899888777 566777655588999877543
Q ss_pred eeeeee-------ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc--------CCcceEEEEeCCCCEEE
Q 019326 123 LTSVKV-------HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI--------GKEASLIKFDGSGEKFF 187 (343)
Q Consensus 123 ~~~~~~-------~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 187 (343)
...... ....|.++...++|.+.+ |+.+ .|.+||..+++....... ...|.++..+++|...+
T Consensus 248 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi 325 (795)
T 4a2l_A 248 KNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWL 325 (795)
T ss_dssp EEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEE
T ss_pred EEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEE
Confidence 322111 135799999998886544 4555 588999877654333211 24578888899888777
Q ss_pred EEeCCcEEEEEcccceeEEEec-------CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecc-------ccc
Q 019326 188 MVTEEKVGIHQAEDAKLLCELD-------GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIED-------AHS 253 (343)
Q Consensus 188 ~~~~~~i~~~d~~~~~~~~~~~-------~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~h~ 253 (343)
...++.+..++..+........ ....|.++....++.|..|+.++-|..||..+++...-... ...
T Consensus 326 gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~ 405 (795)
T 4a2l_A 326 GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGS 405 (795)
T ss_dssp EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSC
T ss_pred EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCC
Confidence 6677889999877654322111 23458888887677888899888899999887654322210 123
Q ss_pred ccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceecc
Q 019326 254 ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRP 325 (343)
Q Consensus 254 ~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~ 325 (343)
..|.++...+++. .|..|+.++-|..||..++................|.++...+++.+.+.
T Consensus 406 ~~v~~i~~d~~g~---------~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig 468 (795)
T 4a2l_A 406 NNIKAVYVDEKKS---------LVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG 468 (795)
T ss_dssp SCEEEEEEETTTT---------EEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE
T ss_pred ccEEEEEEcCCCC---------EEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE
Confidence 5688888776653 48888888889999988753211110000112346888888777765543
No 248
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.26 E-value=9.8e-10 Score=100.69 Aligned_cols=193 Identities=9% Similarity=0.047 Sum_probs=125.2
Q ss_pred CCCeEEEEEeCCCCCCCCceEEE-----eeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCC-----
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFS-----TSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD----- 152 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s-----~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~----- 152 (343)
...+..++|+|++ ++|+- |+....|++||+.+++.+... .+......++|+ |++.|+.++.+.
T Consensus 128 ~~~l~~~~~SpDg-----~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 128 TTALDQLSFSRDG-----RILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp CCEEEEEEECTTS-----SEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred cEEEEEEEECCCC-----CEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCccccc
Confidence 4578899999999 66663 233357999999998865431 111113568899 999998888774
Q ss_pred --------eEEEEEccCCce--eEEEEcC----CcceEEEEeCCCCEEEEE-e----CCcEEEEEcccce-eEEEec-CC
Q 019326 153 --------CLAMVNLVRGRR--SFYHKIG----KEASLIKFDGSGEKFFMV-T----EEKVGIHQAEDAK-LLCELD-GK 211 (343)
Q Consensus 153 --------~i~~wd~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~-~----~~~i~~~d~~~~~-~~~~~~-~~ 211 (343)
.|++|++.++.. ....... .....+.++|++++++.. . .+.+.++|+.++. ....+. +.
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC
Confidence 399999987653 2222222 235678999999988766 3 2478999987763 233333 43
Q ss_pred cceEEeeecCCC-eEEEEeCC---CcEEEEECCCCce--eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcC-CC
Q 019326 212 KRILCAAPGENG-VLFTGGED---RSITAWDTNSGKV--AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASS-DG 284 (343)
Q Consensus 212 ~~i~~~~~~~~~-~l~~~~~d---g~i~i~d~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~-dg 284 (343)
.........+++ +++....+ +.|..+|+.++.. ...+. .|...+. .|++++. .|+.... ++
T Consensus 281 ~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~--~~s~~g~---------~lv~~~~~~g 348 (693)
T 3iuj_A 281 DADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI-PERQQVL--TVHSGSG---------YLFAEYMVDA 348 (693)
T ss_dssp SSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE-CCCSSCE--EEEEETT---------EEEEEEEETT
T ss_pred CceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe-cCCCCEE--EEEEECC---------EEEEEEEECC
Confidence 333333223444 44444443 6799999987754 34555 4655554 7888876 6665544 44
Q ss_pred --cEEEEeccCc
Q 019326 285 --VICVWDVRMA 294 (343)
Q Consensus 285 --~i~vwd~~~~ 294 (343)
.|++|++..+
T Consensus 349 ~~~l~~~d~~g~ 360 (693)
T 3iuj_A 349 TARVEQFDYEGK 360 (693)
T ss_dssp EEEEEEECTTSC
T ss_pred eeEEEEEECCCC
Confidence 6889998754
No 249
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.26 E-value=1.7e-08 Score=79.83 Aligned_cols=204 Identities=12% Similarity=0.059 Sum_probs=144.9
Q ss_pred ceeeEEeEEecCCCC--CeEEEEecC-ceEEEeeC---CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCce
Q 019326 29 TLTLTQLFSYPAHLS--PITTVAVSG-TAAASGGT---DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRN 102 (343)
Q Consensus 29 ~~~~~~~~~~~~h~~--~v~~l~~~~-~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~ 102 (343)
....+.+.+++ |.. ....++|++ ..|+.++. ++.|+++|+.+++.+..+..........+++..+ ..
T Consensus 6 ~~~~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~------~l 78 (266)
T 2iwa_A 6 VYIVEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNE------KL 78 (266)
T ss_dssp EEEEEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETT------EE
T ss_pred ccCceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCC------EE
Confidence 34556666664 553 368999983 56665542 5899999999999998876431233345666532 35
Q ss_pred EEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCC------cceE
Q 019326 103 LFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGK------EASL 176 (343)
Q Consensus 103 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~------~~~~ 176 (343)
.++.-.++.+.++|..+++.+.++...... ...++++++.++++..++.|.++|..+.+......... .+..
T Consensus 79 yv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 79 YQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp EEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred EEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 556666899999999999999888643111 23355677777777778999999999988777666542 3567
Q ss_pred EEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecCC--------------cceEEeeecC-C-CeEEEEeCCCcEEEEEC
Q 019326 177 IKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDGK--------------KRILCAAPGE-N-GVLFTGGEDRSITAWDT 239 (343)
Q Consensus 177 ~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~--------------~~i~~~~~~~-~-~~l~~~~~dg~i~i~d~ 239 (343)
+.+. ++..++.. .++.|.+.|..+++.+..+... .....+++++ + .+++++...+.++..++
T Consensus 157 le~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 157 LEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp EEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 7887 66555555 6889999999999999888732 2457899984 3 46777778889998887
Q ss_pred CCC
Q 019326 240 NSG 242 (343)
Q Consensus 240 ~~~ 242 (343)
...
T Consensus 236 ~~~ 238 (266)
T 2iwa_A 236 HLV 238 (266)
T ss_dssp EEC
T ss_pred ecc
Confidence 654
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.26 E-value=5.8e-09 Score=81.56 Aligned_cols=184 Identities=13% Similarity=0.036 Sum_probs=133.1
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccc-cEEEEEEecCCCEEEEEeCC
Q 019326 73 SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKK-GVNDLAVHHSGKLALTVGRD 151 (343)
Q Consensus 73 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~i~~~~~~~~l~~~~~d 151 (343)
+.+.++......-...|.|+. + .++++.+.+|.|+++|+++++.+..+ .... .-..+++..+ +..+..-.+
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~-~-----~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~-~Ly~ltw~~ 115 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQ-G-----HFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGE-RLYQLTWTE 115 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEET-T-----EEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSS-CEEEEESSS
T ss_pred EEEEEEcCCCccccceEEEEC-C-----EEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCC-EEEEEEccC
Confidence 344555322134457889884 4 58888889999999999999988887 3332 1233555432 444455568
Q ss_pred CeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecC---Cc---ceEEeeecCCCe
Q 019326 152 DCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG---KK---RILCAAPGENGV 224 (343)
Q Consensus 152 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~---~~---~i~~~~~~~~~~ 224 (343)
+.+.+||..+.+.+..+........++ +++..++.+ .++.|.++|..+.+.+..+.- .. .++.+.+.++.+
T Consensus 116 ~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~l 193 (268)
T 3nok_A 116 GLLFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVI 193 (268)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEE
T ss_pred CEEEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEE
Confidence 999999999999988888765544444 567888888 789999999999999888762 22 356677766655
Q ss_pred EEEEeCCCcEEEEECCCCceeEEeccc------------ccccEEEEEEEecCC
Q 019326 225 LFTGGEDRSITAWDTNSGKVAYCIEDA------------HSARVKGIVVLTKND 266 (343)
Q Consensus 225 l~~~~~dg~i~i~d~~~~~~~~~~~~~------------h~~~v~~~~~~~~~~ 266 (343)
.+....+..|.+.|..+++.+..+... -....++|++.|..+
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~ 247 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSG 247 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTC
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCC
Confidence 555556889999999999999888722 113678999998765
No 251
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.25 E-value=1.3e-08 Score=85.82 Aligned_cols=214 Identities=11% Similarity=0.058 Sum_probs=138.5
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEec-------CCCCCeEEEEec-CceEEEeeCC------CeEEEEE
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYP-------AHLSPITTVAVS-GTAAASGGTD------DTIHLYD 68 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~l~~~-~~~l~s~~~d------g~i~iwd 68 (343)
++.|..++.|+++|+.+... +.+....+. .-...-..+... ...++++..+ |.|.+.|
T Consensus 99 ~v~~l~s~~I~viD~~t~p~--------~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 99 IVPGLRSSRIYIIDTKPNPR--------EPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp EEEBTTTCCEEEEECCSCTT--------SCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEEC
T ss_pred EEccCCCCeEEEEECCCCCC--------CceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEE
Confidence 56677889999999875211 112222221 001122333444 2255555444 7899999
Q ss_pred cCCCeeeeEeccC--CCCCeEEEEEeCCCCCCCCceEEEee-------------------CCCeEEEEECCCcceeeeee
Q 019326 69 LSTSSSLGAIHHH--ESSSVTSLAFYTPQNLSVPRNLFSTS-------------------ADGFVSIFDADPFVLLTSVK 127 (343)
Q Consensus 69 ~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~~~~~~l~s~~-------------------~dg~i~iwd~~~~~~~~~~~ 127 (343)
.++.+.+..+... ...--..+.|+|++ +.+++.. .+.+|.+||+.+++.+.++.
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~-----~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPN-----EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTT-----TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCC-----CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 9999999888633 01223458889998 6777774 36899999999988888877
Q ss_pred ec-c-ccEEEEEE--ecCCCEEEEEe------CCCeEEEEEccCCceeEEEE--c-------------------CCcceE
Q 019326 128 VH-K-KGVNDLAV--HHSGKLALTVG------RDDCLAMVNLVRGRRSFYHK--I-------------------GKEASL 176 (343)
Q Consensus 128 ~~-~-~~v~~i~~--~~~~~~l~~~~------~d~~i~~wd~~~~~~~~~~~--~-------------------~~~~~~ 176 (343)
.. . .....+.| +|+++++++++ .+++|.+|....++...... . ...+..
T Consensus 246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~ 325 (462)
T 2ece_A 246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTD 325 (462)
T ss_dssp SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCC
T ss_pred cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeE
Confidence 53 1 24455655 99998888776 46788877765543211110 0 234677
Q ss_pred EEEeCCCCEEEEE--eCCcEEEEEccc---ceeEEEecCCc---------------ceEEeeec-CCCeEEEEe
Q 019326 177 IKFDGSGEKFFMV--TEEKVGIHQAED---AKLLCELDGKK---------------RILCAAPG-ENGVLFTGG 229 (343)
Q Consensus 177 ~~~~~~~~~~~~~--~~~~i~~~d~~~---~~~~~~~~~~~---------------~i~~~~~~-~~~~l~~~~ 229 (343)
+.+++++++|+++ ..+.|.+||+.. .+.+..+...+ ....+.++ ++++|+++.
T Consensus 326 I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 326 IDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999999999 788999999863 35555554321 24667777 566777766
No 252
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.23 E-value=4e-09 Score=82.46 Aligned_cols=191 Identities=10% Similarity=0.042 Sum_probs=133.9
Q ss_pred ceeeeeeeccc--cEEEEEEecCCCEEEEEeCCC--eEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcE
Q 019326 121 VLLTSVKVHKK--GVNDLAVHHSGKLALTVGRDD--CLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKV 194 (343)
Q Consensus 121 ~~~~~~~~~~~--~v~~i~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i 194 (343)
+.+.++. |.. ....+.|+ ++.++.+.+.+| .|+.+|+++++.......+.......+.+.+..++.. .++.+
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEE
Confidence 3455553 544 35788898 677777777766 8999999999999888887766554444455666666 69999
Q ss_pred EEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEeccc-cc---ccEEEEEEEecCCCCCC
Q 019326 195 GIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDA-HS---ARVKGIVVLTKNDGGST 270 (343)
Q Consensus 195 ~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-h~---~~v~~~~~~~~~~~~~~ 270 (343)
.+||..+.+.+.+++....-..+++ +++.|+.+..++.|.++|..+.+.+.++.-. .. ..++.+.+. ++.
T Consensus 110 ~v~D~~t~~~~~ti~~~~eG~glt~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~---- 183 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGEGWGLTH-NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE---- 183 (262)
T ss_dssp EEEETTTCCEEEEEECSSCCCCEEE-CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE----
T ss_pred EEEECccCcEEEEEECCCCceEEec-CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE----
Confidence 9999999999999985544345555 5666766666888999999999988887722 12 334567765 443
Q ss_pred CCCCeEEEEEcCCCcEEEEeccCccccCCCccccc--------ccccceeEEEcCCCCceec
Q 019326 271 AENPYLVASASSDGVICVWDVRMAIKEKPLPLAEA--------KTNSRLTCLAGSSTKSFKR 324 (343)
Q Consensus 271 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--------~~~~~i~~~~~s~~~~~~~ 324 (343)
..+..-.++.|.+.|.++++....+.+... ......+.+|++|++..+.
T Consensus 184 -----lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lf 240 (262)
T 3nol_A 184 -----IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLF 240 (262)
T ss_dssp -----EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEE
T ss_pred -----EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEE
Confidence 555555688999999999864444433221 1223578999999765443
No 253
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.23 E-value=8.3e-08 Score=77.07 Aligned_cols=246 Identities=11% Similarity=0.062 Sum_probs=147.7
Q ss_pred ceEEEeeCCCeEEEEEcCCCeee-----eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeee
Q 019326 53 TAAASGGTDDTIHLYDLSTSSSL-----GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK 127 (343)
Q Consensus 53 ~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 127 (343)
.+|+.+.. +.|+.++++..... ..+... ...+..+++.+.+. .++++-..++.|..++.........+.
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~-~~~~~gi~~d~~~~----~ly~~d~~~~~I~~~~~~g~~~~~~~~ 75 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIP-AKVIIGLAFDCVDK----VVYWTDISEPSIGRASLHGGEPTTIIR 75 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEE-EEEEEEEEEETTTT----EEEEEETTTTEEEEEESSSCCCEEEEC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCC-CCcEEEEEEecCCC----EEEEEECCCCEEEEEecCCCCcEEEEE
Confidence 44555553 47888888765321 122222 24578999998651 455555567899999997654433332
Q ss_pred eccccEEEEEEecCCCEE-EEEeCCCeEEEEEccCCceeEEEEcC-CcceEEEEeCCCCEEEEE-e---CCcEEEEEccc
Q 019326 128 VHKKGVNDLAVHHSGKLA-LTVGRDDCLAMVNLVRGRRSFYHKIG-KEASLIKFDGSGEKFFMV-T---EEKVGIHQAED 201 (343)
Q Consensus 128 ~~~~~v~~i~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~---~~~i~~~d~~~ 201 (343)
........+++++++..| ++-...+.|.++++............ ..+..++++|++..++.+ . .+.|..+++..
T Consensus 76 ~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 76 QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 222467899999975544 45555789999998754432222222 467889999977766666 2 36788888754
Q ss_pred ceeEEEec--CCcceEEeeecC-CCeE-EEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEE
Q 019326 202 AKLLCELD--GKKRILCAAPGE-NGVL-FTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLV 277 (343)
Q Consensus 202 ~~~~~~~~--~~~~i~~~~~~~-~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l 277 (343)
.. ...+. .......+++++ ++.| ++-...+.|.++|.........+. . .....+++.. .+. ++
T Consensus 156 ~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~-~~~P~gi~~d-~~~---------ly 222 (267)
T 1npe_A 156 TN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE-G-LQYPFAVTSY-GKN---------LY 222 (267)
T ss_dssp CC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE-C-CCSEEEEEEE-TTE---------EE
T ss_pred CC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec-C-CCCceEEEEe-CCE---------EE
Confidence 32 22222 234567888874 4555 455567899999997544333333 2 2334566654 222 55
Q ss_pred EEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCC
Q 019326 278 ASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTK 320 (343)
Q Consensus 278 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 320 (343)
++....+.|.++|..+++.....+.. .......+++.|++
T Consensus 223 va~~~~~~v~~~d~~~g~~~~~i~~g---~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 223 YTDWKTNSVIAMDLAISKEMDTFHPH---KQTRLYGITIALSQ 262 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECCS---SCCCCCCEEEECSC
T ss_pred EEECCCCeEEEEeCCCCCceEEEccc---cccccceeeecCcc
Confidence 55556789999999877533322211 11135667777665
No 254
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.23 E-value=1e-08 Score=80.17 Aligned_cols=184 Identities=11% Similarity=0.033 Sum_probs=130.6
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC--eEEEEECCCcceeeeeeecccc-EEEEEEecCCCEEEE-E
Q 019326 73 SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG--FVSIFDADPFVLLTSVKVHKKG-VNDLAVHHSGKLALT-V 148 (343)
Q Consensus 73 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~-v~~i~~~~~~~~l~~-~ 148 (343)
+.+.++......-...|.|+ ++ .++.+.+.+| .|+++|+++++.+..+...... -..+++. ++.|.. .
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~-----~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~lt 103 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NG-----YFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLT 103 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TT-----EEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEE
T ss_pred EEEEEecCCCCcccceEEEE-CC-----EEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEE
Confidence 34455532213445788998 55 5777777776 8999999999998888754322 1234444 444444 4
Q ss_pred eCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecC---Ccc---eEEeeecC
Q 019326 149 GRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG---KKR---ILCAAPGE 221 (343)
Q Consensus 149 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~---~~~---i~~~~~~~ 221 (343)
-.++.+.+||..+.+.+..+..+.....++ +++..++.+ ..+.|.++|..+.+.+..+.- ..+ ++.+.+.+
T Consensus 104 w~~~~v~v~D~~t~~~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~ 181 (262)
T 3nol_A 104 WKNGLGFVWNIRNLRQVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVD 181 (262)
T ss_dssp SSSSEEEEEETTTCCEEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEET
T ss_pred eeCCEEEEEECccCcEEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEEC
Confidence 458999999999999988888765444444 567878777 678899999999998888762 223 45577766
Q ss_pred CCeEEEEeCCCcEEEEECCCCceeEEeccc-----------ccccEEEEEEEecCC
Q 019326 222 NGVLFTGGEDRSITAWDTNSGKVAYCIEDA-----------HSARVKGIVVLTKND 266 (343)
Q Consensus 222 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----------h~~~v~~~~~~~~~~ 266 (343)
+.+.+..-.++.|.+.|..+++.+..+... -....++|+++|+.+
T Consensus 182 G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~ 237 (262)
T 3nol_A 182 GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHH 237 (262)
T ss_dssp TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTT
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCC
Confidence 655555556889999999999999888721 013568999999876
No 255
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.22 E-value=5.5e-08 Score=75.41 Aligned_cols=185 Identities=14% Similarity=0.073 Sum_probs=132.9
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC--eEEEEECCCcceeeeeeecccc-EEEEEEecCCCEEEEEe
Q 019326 73 SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG--FVSIFDADPFVLLTSVKVHKKG-VNDLAVHHSGKLALTVG 149 (343)
Q Consensus 73 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~-v~~i~~~~~~~~l~~~~ 149 (343)
+.+.++......-...|.|++ + .++.+.+.+| .|+.+|+.+++.+..+...... -..+++.. ++.....-
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~-----~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw 82 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-G-----HLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTW 82 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-T-----EEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEES
T ss_pred EEEEEcCCCCccccccEEEEC-C-----EEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEe
Confidence 345555322245677899987 4 4677777754 8999999999998888644331 13344442 34444555
Q ss_pred CCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEecC---C---cceEEeeecCC
Q 019326 150 RDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELDG---K---KRILCAAPGEN 222 (343)
Q Consensus 150 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~---~---~~i~~~~~~~~ 222 (343)
.++.+.+||..+.+.+..+..+.....++ +++..++++ .++.|.++|..+.+.+..+.- . ..++.+.+.++
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G 160 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNG 160 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT
T ss_pred eCCEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCC
Confidence 68999999999999988888776555454 567888888 888999999999999888772 2 34566777666
Q ss_pred CeEEEEeCCCcEEEEECCCCceeEEeccc------------ccccEEEEEEEecCC
Q 019326 223 GVLFTGGEDRSITAWDTNSGKVAYCIEDA------------HSARVKGIVVLTKND 266 (343)
Q Consensus 223 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------h~~~v~~~~~~~~~~ 266 (343)
...+....+..|.+.|..+++.+..+..+ -....++|++.|...
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 216 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD 216 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT
T ss_pred EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCC
Confidence 65555556889999999999998887622 123668999999766
No 256
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.21 E-value=1.8e-07 Score=87.27 Aligned_cols=263 Identities=10% Similarity=0.100 Sum_probs=171.4
Q ss_pred CCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEec-----cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEE
Q 019326 42 LSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIH-----HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIF 115 (343)
Q Consensus 42 ~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 115 (343)
...|.++..+ ...|..|+.++-|..|+..+........ .-....|.++...+++ .|..|+.++-|..|
T Consensus 309 ~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g------~lWiGt~~~Gl~~~ 382 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDK------NLWIGTNDGGLNLY 382 (795)
T ss_dssp SSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTS------CEEEEESSSCEEEE
T ss_pred CCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCC------CEEEEECCCCeEEE
Confidence 4679999998 6678888887779999877554322111 1013569999988877 67888888889999
Q ss_pred ECCCcceeeeee--------eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE-----cCCcceEEEEeCC
Q 019326 116 DADPFVLLTSVK--------VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK-----IGKEASLIKFDGS 182 (343)
Q Consensus 116 d~~~~~~~~~~~--------~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-----~~~~~~~~~~~~~ 182 (343)
+..+++...... .....|.+++..++++.|..|+.++.|..+|..+++...... ....+.++...++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 462 (795)
T 4a2l_A 383 NPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGE 462 (795)
T ss_dssp CTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS
T ss_pred cCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC
Confidence 987754332211 123578999998888757778887889999998876443321 1245778888888
Q ss_pred CCEEEEEeCCcEEEEEcccceeEEEec-------CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEec------
Q 019326 183 GEKFFMVTEEKVGIHQAEDAKLLCELD-------GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE------ 249 (343)
Q Consensus 183 ~~~~~~~~~~~i~~~d~~~~~~~~~~~-------~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------ 249 (343)
+...+... +.+.+|+..+++...... ....|.++.....+.+..|+. +-|..||..+++. .+.
T Consensus 463 g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~ 538 (795)
T 4a2l_A 463 GNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPVS 538 (795)
T ss_dssp SCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCSC
T ss_pred CCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCCC
Confidence 87666655 678899988765433221 235688888876667777777 5688999877654 332
Q ss_pred ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccc
Q 019326 250 DAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQ 326 (343)
Q Consensus 250 ~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~ 326 (343)
......|.++...+++. +. .++.. -|..||..+..... ......-....|.++...+++.+-+..
T Consensus 539 ~l~~~~i~~i~~d~~g~---------lW-igT~~-Gl~~~d~~~~~~~~-~~~~~gl~~~~i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 539 NVTKLFTNCIYEASNGI---------IW-VGTRE-GFYCFNEKDKQIKR-YNTTNGLPNNVVYGILEDSFGRLWLST 603 (795)
T ss_dssp GGGGSCEEEEEECTTSC---------EE-EEESS-CEEEEETTTTEEEE-ECGGGTCSCSCEEEEEECTTSCEEEEE
T ss_pred CCCCCeeEEEEECCCCC---------EE-EEeCC-CceeECCCCCcEEE-eCCCCCCchhheEEEEECCCCCEEEEc
Confidence 12345788888777664 44 44444 57888877653211 111111123357788887777665443
No 257
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.16 E-value=4.5e-08 Score=75.89 Aligned_cols=190 Identities=12% Similarity=0.042 Sum_probs=132.0
Q ss_pred ceeeeeeeccc--cEEEEEEecCCCEEEEEeCC--CeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcE
Q 019326 121 VLLTSVKVHKK--GVNDLAVHHSGKLALTVGRD--DCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKV 194 (343)
Q Consensus 121 ~~~~~~~~~~~--~v~~i~~~~~~~~l~~~~~d--~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i 194 (343)
+.+.++ .|.. ....+.|++ +.++.+.+.+ ..|+.+|+.+++.......+.......+.+.+..++.. .++.+
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEE
Confidence 345555 3553 567889986 5666666665 48999999999999888887666544444445666555 79999
Q ss_pred EEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEeccc-cc---ccEEEEEEEecCCCCCC
Q 019326 195 GIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDA-HS---ARVKGIVVLTKNDGGST 270 (343)
Q Consensus 195 ~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-h~---~~v~~~~~~~~~~~~~~ 270 (343)
.+||..+.+.+.+++....-..++. +++.|+.+..++.|.++|..+.+.+.++.-. +. ..++.+.+. ++.
T Consensus 88 ~v~D~~tl~~~~ti~~~~~Gwglt~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~---- 161 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGEGWALTS-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE---- 161 (243)
T ss_dssp EEEETTTTEEEEEEECSSCCCEEEE-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE----
T ss_pred EEEECCcCcEEEEEeCCCCceEEee-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE----
Confidence 9999999999999986555456665 5566666667899999999999988887722 22 244566654 332
Q ss_pred CCCCeEEEEEcCCCcEEEEeccCccccCCCccccc---------ccccceeEEEcCCCCcee
Q 019326 271 AENPYLVASASSDGVICVWDVRMAIKEKPLPLAEA---------KTNSRLTCLAGSSTKSFK 323 (343)
Q Consensus 271 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~---------~~~~~i~~~~~s~~~~~~ 323 (343)
.++..-.+..|.+.|.++++......+... ......+.+|+++++..+
T Consensus 162 -----lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~l 218 (243)
T 3mbr_X 162 -----LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRL 218 (243)
T ss_dssp -----EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEE
T ss_pred -----EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEE
Confidence 555555678999999999864443333322 123457899999875543
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.16 E-value=3.2e-07 Score=75.84 Aligned_cols=231 Identities=10% Similarity=0.012 Sum_probs=146.0
Q ss_pred CCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccC-------------------CCCCeEEEEEeC-CCCCCCC
Q 019326 43 SPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHH-------------------ESSSVTSLAFYT-PQNLSVP 100 (343)
Q Consensus 43 ~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------------~~~~v~~l~~~~-~~~~~~~ 100 (343)
....+++++ +++++++..++.|..|+..+++.. .+... ....+..+++.+ ++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g----- 92 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN----- 92 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-----
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCC-----
Confidence 445677887 666888888999999998765432 22110 013578899997 55
Q ss_pred ceEEEeeCCCeEEEEECCCcceeeeeee-----ccccEEEEEEec-CCCEEEEEeC-----------------CCeEEEE
Q 019326 101 RNLFSTSADGFVSIFDADPFVLLTSVKV-----HKKGVNDLAVHH-SGKLALTVGR-----------------DDCLAMV 157 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~i~~~~-~~~~l~~~~~-----------------d~~i~~w 157 (343)
.|+.+...+.|..+|..+++. ..+.. .......+++.+ +|+..++-.. ++.|..+
T Consensus 93 -~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 93 -QLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp -EEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred -cEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 566665556688888776532 22221 113478899999 8877766432 3678889
Q ss_pred EccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccce--eEEEe-cCCcceEEeeecC-CCeEEEEeC-
Q 019326 158 NLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAK--LLCEL-DGKKRILCAAPGE-NGVLFTGGE- 230 (343)
Q Consensus 158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~--~~~~~-~~~~~i~~~~~~~-~~~l~~~~~- 230 (343)
|..+++.............++++|+++.++++ ..+.|.+|++.... ....+ .... ...+++.+ +++.++...
T Consensus 171 d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 171 DPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp ETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEE
T ss_pred eCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCc
Confidence 98777644333333556789999999977777 56889999987421 11111 1223 66777774 444444333
Q ss_pred ---------CCcEEEEECCCCceeEEecccc---cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 231 ---------DRSITAWDTNSGKVAYCIEDAH---SARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 231 ---------dg~i~i~d~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
.+.|..+|.. ++.+..+.... ...++++++ ..+. ++++....+.|..+++..
T Consensus 250 ~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~---------L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGL---------LYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTE---------EEEECSSCSEEEEEEC--
T ss_pred ccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCE---------EEEeecCCCceEEEeccc
Confidence 4678889874 77777765222 234666665 3332 666666788899998864
No 259
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.14 E-value=1.5e-08 Score=79.30 Aligned_cols=189 Identities=10% Similarity=0.038 Sum_probs=131.1
Q ss_pred ceeeeeeeccc--cEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEE
Q 019326 121 VLLTSVKVHKK--GVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGI 196 (343)
Q Consensus 121 ~~~~~~~~~~~--~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~ 196 (343)
+.+.++. |.. ....+.|+ ++.++++.+.+|.|+.+|+++++.+... .+.......+.+.+..++.. .++.+.+
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V 120 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFT 120 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEE
T ss_pred EEEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEE
Confidence 3445553 443 45788887 4677788888899999999999988877 76655443333344555555 7999999
Q ss_pred EEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEeccc-cc---ccEEEEEEEecCCCCCCCC
Q 019326 197 HQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDA-HS---ARVKGIVVLTKNDGGSTAE 272 (343)
Q Consensus 197 ~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-h~---~~v~~~~~~~~~~~~~~~~ 272 (343)
||..+.+.+.++.....-..+++ +++.|+.+..++.|.++|..+.+.+.++.-. +. ..++.+.+. ++.
T Consensus 121 ~D~~Tl~~~~ti~~~~eGwGLt~-Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~------ 192 (268)
T 3nok_A 121 WSGMPPQRERTTRYSGEGWGLCY-WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV------ 192 (268)
T ss_dssp EETTTTEEEEEEECSSCCCCEEE-ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE------
T ss_pred EECCcCcEEEEEeCCCceeEEec-CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE------
Confidence 99999999999985544455555 5666777777999999999999988887621 22 244667766 332
Q ss_pred CCeEEEEEcCCCcEEEEeccCccccCCCccccc---------ccccceeEEEcCCCCcee
Q 019326 273 NPYLVASASSDGVICVWDVRMAIKEKPLPLAEA---------KTNSRLTCLAGSSTKSFK 323 (343)
Q Consensus 273 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~---------~~~~~i~~~~~s~~~~~~ 323 (343)
.++..-.+..|.+-|.++++....+.+... ......+.||+++++..+
T Consensus 193 ---lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rl 249 (268)
T 3nok_A 193 ---IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRI 249 (268)
T ss_dssp ---EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCE
T ss_pred ---EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEE
Confidence 555555688999999999865444443321 123457899999875543
No 260
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.09 E-value=6.7e-07 Score=83.21 Aligned_cols=262 Identities=12% Similarity=0.050 Sum_probs=165.2
Q ss_pred CCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEec--------------cCCCCCeEEEEEeCCCCCCCCceEEEe
Q 019326 42 LSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIH--------------HHESSSVTSLAFYTPQNLSVPRNLFST 106 (343)
Q Consensus 42 ~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------~~~~~~v~~l~~~~~~~~~~~~~l~s~ 106 (343)
...|.++... ...|..|+..+-|.++|..+++...... .. ...|.++...+++ .|..|
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~-~~~v~~i~~D~~g------~lWig 329 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLS-NASARYIFQDSFN------NIWIG 329 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBS-SSCEEEEEECSSC------CEEEE
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCC-CCeEEEEEEeCCC------CEEEE
Confidence 4579999887 6677778875568889987765332111 12 4679999988877 68888
Q ss_pred eCCCeEEEEECCCcceeeeee----------eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE---E-cCC
Q 019326 107 SADGFVSIFDADPFVLLTSVK----------VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH---K-IGK 172 (343)
Q Consensus 107 ~~dg~i~iwd~~~~~~~~~~~----------~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~---~-~~~ 172 (343)
+.++-|..++..+.... .+. .....|.++...+++. |..|+.++-|..+|..++...... . ...
T Consensus 330 t~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~ 407 (781)
T 3v9f_A 330 TWGGGINFISNAPPTFH-TWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSN 407 (781)
T ss_dssp EBSSCEEEECSSCCSCE-EEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCS
T ss_pred ecCCeEEEeCCCCCcce-eeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCc
Confidence 88888999988654322 221 1234689999888775 556666667889997655432211 1 124
Q ss_pred cceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEec---CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 173 EASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCELD---GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
.|.++...+++...+...++.+..++..+++...... ....|.++.....+.|..|+. +-|..||..+++......
T Consensus 408 ~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~ 486 (781)
T 3v9f_A 408 SVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYD 486 (781)
T ss_dssp BEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEEC
T ss_pred ceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEeccc
Confidence 5777888888877665566778889887765433221 345688888876677888877 568999988765433222
Q ss_pred ccc-----cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceec
Q 019326 250 DAH-----SARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKR 324 (343)
Q Consensus 250 ~~h-----~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~ 324 (343)
.. ...|.++...+++. |..|+.++-|..||.++........ ........|.++...+++.+-+
T Consensus 487 -~~~~~~~~~~i~~i~~d~~g~----------lWigt~~~Gl~~~~~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~lWi 554 (781)
T 3v9f_A 487 -TSNSQLLENFVRSIAQDSEGR----------FWIGTFGGGVGIYTPDMQLVRKFNQ-YEGFCSNTINQIYRSSKGQMWL 554 (781)
T ss_dssp -TTTSSCSCSCEEEEEECTTCC----------EEEEESSSCEEEECTTCCEEEEECT-TTTCSCSCEEEEEECTTSCEEE
T ss_pred -CcccccccceeEEEEEcCCCC----------EEEEEcCCCEEEEeCCCCeEEEccC-CCCCCCCeeEEEEECCCCCEEE
Confidence 12 35788888776664 5555554447778876643211100 1111234578888877776544
Q ss_pred c
Q 019326 325 P 325 (343)
Q Consensus 325 ~ 325 (343)
.
T Consensus 555 ~ 555 (781)
T 3v9f_A 555 A 555 (781)
T ss_dssp E
T ss_pred E
Confidence 3
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.09 E-value=1.5e-06 Score=80.80 Aligned_cols=269 Identities=12% Similarity=0.075 Sum_probs=168.0
Q ss_pred CCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEecc------CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 42 LSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHH------HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 42 ~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
...|.++..+ ...|..|+.+ -+.+||..+++....... .....|.++...+++ .|..|+..+-|.+
T Consensus 210 ~~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g------~lWigt~~~Gl~~ 282 (781)
T 3v9f_A 210 GNDVRCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDN------KLWIATELNGIMI 282 (781)
T ss_dssp CSSEEEEEECTTCCEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTS------EEEEEESSSCEEE
T ss_pred CCceeEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCC------CEEEEeCCCCeEE
Confidence 3568898887 5556666666 588999877654332111 114679999988877 6777887567888
Q ss_pred EECCCcceeeeee--------------eccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE----------c
Q 019326 115 FDADPFVLLTSVK--------------VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK----------I 170 (343)
Q Consensus 115 wd~~~~~~~~~~~--------------~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~----------~ 170 (343)
+|..+.+...... .....|.++...++|. |..|+.++-|..++..+........ .
T Consensus 283 ~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~ 361 (781)
T 3v9f_A 283 LDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLS 361 (781)
T ss_dssp EETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCS
T ss_pred ECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCC
Confidence 9987654322111 1245799999988875 5667767778889887654322211 1
Q ss_pred CCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeEEEe----cCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeE
Q 019326 171 GKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLCEL----DGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAY 246 (343)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~----~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 246 (343)
...|.++...+++...+...++.+..|+..++...... .....|.++....++.|..|+.++-|..+|..+++. .
T Consensus 362 ~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-~ 440 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKF-Q 440 (781)
T ss_dssp SSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEE-E
T ss_pred CcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcE-E
Confidence 24577888888887766666777999998765433211 133568888887667788888877899999877653 3
Q ss_pred Eecc--cccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccc-ccccccceeEEEcCCCCcee
Q 019326 247 CIED--AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLA-EAKTNSRLTCLAGSSTKSFK 323 (343)
Q Consensus 247 ~~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~~ 323 (343)
.+.. .....|.++...+++ .|..|+. +-|..+|..++......... .......|.++...+++.+-
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g----------~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW 509 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNK----------KIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW 509 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTS----------EEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE
T ss_pred EeccCCCCCCeEEEEEECCCC----------CEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE
Confidence 3331 234678888776655 4555555 55888988765321100000 00113468888888887766
Q ss_pred ccccCCC
Q 019326 324 RPQIGDS 330 (343)
Q Consensus 324 ~~~~~~~ 330 (343)
+...+.+
T Consensus 510 igt~~~G 516 (781)
T 3v9f_A 510 IGTFGGG 516 (781)
T ss_dssp EEESSSC
T ss_pred EEEcCCC
Confidence 5544333
No 262
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.06 E-value=3.7e-06 Score=71.53 Aligned_cols=217 Identities=12% Similarity=0.029 Sum_probs=142.0
Q ss_pred CCCCeEEEEec--Cc-eEEEeeCCCeEEEEEcCCC----eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEE
Q 019326 41 HLSPITTVAVS--GT-AAASGGTDDTIHLYDLSTS----SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVS 113 (343)
Q Consensus 41 h~~~v~~l~~~--~~-~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 113 (343)
....+..|+|+ .+ ++++-...+.|+.+++... .....+... ......|++.+.+. +++++-...+.|.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~~p~glavD~~~~----~lY~~d~~~~~I~ 184 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWIHS----NIYWTDSVLGTVS 184 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS-CSCEEEEEEETTTT----EEEEEETTTTEEE
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC-CCCcccEEEEecCC----ceEEEECCCCeEE
Confidence 35568899998 34 4455556788999988752 223333333 46778899987441 5666666788999
Q ss_pred EEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC--CCeEEEEEccCCceeEEEEcC-CcceEEEEeCCCCEEEEE-
Q 019326 114 IFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR--DDCLAMVNLVRGRRSFYHKIG-KEASLIKFDGSGEKFFMV- 189 (343)
Q Consensus 114 iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~- 189 (343)
+.+++.......+.........|+++|.+..|+.... .+.|...++............ ..+..+++++++..|+.+
T Consensus 185 ~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 185 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVD 264 (400)
T ss_dssp EECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred EEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEE
Confidence 9998765444444434446789999997666655543 377888888654433333322 567889999988888888
Q ss_pred -eCCcEEEEEcccceeEEEec---CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEe
Q 019326 190 -TEEKVGIHQAEDAKLLCELD---GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLT 263 (343)
Q Consensus 190 -~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~ 263 (343)
..+.|..+|+.......... .-.....+++..+.++++-...+.|..+|..+++.+..+. .......++.+..
T Consensus 265 ~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~-~~~~~p~~i~v~~ 341 (400)
T 3p5b_L 265 SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA-ENLLSPEDMVLFH 341 (400)
T ss_dssp TTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEE-CSCSCEEEEEEES
T ss_pred CCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe-cCCCCCceEEEEe
Confidence 56789999986543332222 1234556666556677777778899999988888777776 4444556665544
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.04 E-value=1.1e-06 Score=74.48 Aligned_cols=215 Identities=13% Similarity=0.051 Sum_probs=138.0
Q ss_pred CCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC
Q 019326 42 LSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD 118 (343)
Q Consensus 42 ~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 118 (343)
...+..++|+ +.++++-...+.|..++++.......+... ......+++.+.+. .++++-...+.|.+.+++
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~-~~~p~glavd~~~g----~lY~~d~~~~~I~~~~~d 189 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG-LESPGGLAVDWVHD----KLYWTDSGTSRIEVANLD 189 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS-CSCCCCEEEETTTT----EEEEEETTTTEEEECBTT
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC-CCCccEEEEEeCCC----eEEEEcCCCCeEEEEeCC
Confidence 3457889987 445555556788999998866544434333 34566788887551 455666667889999887
Q ss_pred CcceeeeeeeccccEEEEEEecCCCEEEEEe-CC-CeEEEEEccCCceeEEEEc-CCcceEEEEeCCCCEEEEE--eCCc
Q 019326 119 PFVLLTSVKVHKKGVNDLAVHHSGKLALTVG-RD-DCLAMVNLVRGRRSFYHKI-GKEASLIKFDGSGEKFFMV--TEEK 193 (343)
Q Consensus 119 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-~d-~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~ 193 (343)
.......+.........++++|.+..|+... .. +.|..+++........... -..+..++++|++..|+.+ ..+.
T Consensus 190 g~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~ 269 (386)
T 3v65_B 190 GAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV 269 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE
T ss_pred CCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE
Confidence 5443333333335678999998766555544 34 6788888765443333222 2457889999988888777 5678
Q ss_pred EEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEE
Q 019326 194 VGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVL 262 (343)
Q Consensus 194 i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~ 262 (343)
|..+++........+. .......+++..+.++++....+.|..+|..+++....+. .......+|++.
T Consensus 270 I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~-~~~~~p~gi~v~ 338 (386)
T 3v65_B 270 IERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR-NKLHFPMDIHTL 338 (386)
T ss_dssp EEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE-CSCSCCCCEEEE
T ss_pred EEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc-cCCCCCceEEEE
Confidence 8889876543332232 2334566666556666677778889999977787776666 333344455544
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.03 E-value=4.4e-06 Score=68.73 Aligned_cols=228 Identities=14% Similarity=0.040 Sum_probs=140.4
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--Cc-eEEEeeCCCeEEEEEcCC----Ceee
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GT-AAASGGTDDTIHLYDLST----SSSL 75 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~~~dg~i~iwd~~~----~~~~ 75 (343)
|+.+.. +.|+..++... . ...+ +. ....+..++|+ ++ .+++-...+.|..+++.. ....
T Consensus 4 ll~~~~-~~I~~i~~~~~-------~---~~~~--~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~ 69 (316)
T 1ijq_A 4 LFFTNR-HEVRKMTLDRS-------E---YTSL--IP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD 69 (316)
T ss_dssp EEEECB-SSEEEEETTSC-------C---CEEE--EC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE
T ss_pred EEEECC-CeEEEEECCCc-------c---eEeh--hc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccE
Confidence 334443 56888888751 1 1111 12 34567889997 44 455555678999999876 2222
Q ss_pred eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC--Ce
Q 019326 76 GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD--DC 153 (343)
Q Consensus 76 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d--~~ 153 (343)
..+... -.....+++.+.+. +++++-...+.|.+.+++.......+.........++++|.+..|+.+... +.
T Consensus 70 ~~~~~~-~~~p~glavd~~~~----~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~ 144 (316)
T 1ijq_A 70 TVISRD-IQAPDGLAVDWIHS----NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK 144 (316)
T ss_dssp EEECSS-CSCCCEEEEETTTT----EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE
T ss_pred EEEeCC-CCCcCEEEEeecCC----eEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCe
Confidence 223322 34567899986541 455666678899999987644333333334567899999966655555443 68
Q ss_pred EEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEec---CCcceEEeeecCCCeEEE
Q 019326 154 LAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELD---GKKRILCAAPGENGVLFT 227 (343)
Q Consensus 154 i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~ 227 (343)
|...++.......... .-..+..+++++++..++.+ ..+.|..+|+.......... .......+++..+.++++
T Consensus 145 I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~ 224 (316)
T 1ijq_A 145 IKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWT 224 (316)
T ss_dssp EEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEE
T ss_pred EEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEE
Confidence 8888875443322222 22567889999988888777 56789999987433222222 123456677755566666
Q ss_pred EeCCCcEEEEECCCCceeEEec
Q 019326 228 GGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 228 ~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
-...+.|..++..+++.+..+.
T Consensus 225 d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 225 DIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp ETTTTEEEEEETTTCCCCEEEE
T ss_pred ECCCCeEEEEeCCCCcceEEEe
Confidence 6677889999988787666665
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.01 E-value=2.6e-06 Score=71.11 Aligned_cols=214 Identities=13% Similarity=0.036 Sum_probs=135.5
Q ss_pred CCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC
Q 019326 43 SPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP 119 (343)
Q Consensus 43 ~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 119 (343)
..+..++|+ +.++++-...+.|..++++.......+... ......+++.+.+. .++++-...+.|.+.+++.
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~-~~~p~glavd~~~g----~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG-LESPGGLAVDWVHD----KLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-CSCCCEEEEETTTT----EEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCC-CCCccEEEEecCCC----eEEEEcCCCCeEEEEcCCC
Confidence 447888987 344555556788999998866544433333 34567889987551 4566666678999999876
Q ss_pred cceeeeeeeccccEEEEEEecCCCEEEEE-eCC-CeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE--eCCcE
Q 019326 120 FVLLTSVKVHKKGVNDLAVHHSGKLALTV-GRD-DCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV--TEEKV 194 (343)
Q Consensus 120 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~~d-~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~i 194 (343)
......+...-.....++++|.+..|+.. ... +.|..+++.......... .-..+..++++|++..|+.+ ..+.|
T Consensus 148 ~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I 227 (349)
T 3v64_C 148 AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 227 (349)
T ss_dssp CSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEE
Confidence 44333333233467899999965555444 444 788888876543322222 12457889999988888777 56789
Q ss_pred EEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEE
Q 019326 195 GIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVL 262 (343)
Q Consensus 195 ~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~ 262 (343)
..+++........+. .......+++..+.++++-...+.|..++..+++....+. .......++++.
T Consensus 228 ~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~-~~~~~p~gi~v~ 295 (349)
T 3v64_C 228 ERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR-NKLHFPMDIHTL 295 (349)
T ss_dssp EEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE-CSCSCCCCEEEE
T ss_pred EEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEec-cCCCCCceEEEE
Confidence 999876543322222 2334566666555566666677889888877777666665 333344455443
No 266
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.95 E-value=9.7e-06 Score=66.59 Aligned_cols=237 Identities=10% Similarity=0.000 Sum_probs=146.7
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeee-eEeccCCCC
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSL-GAIHHHESS 84 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~ 84 (343)
...|+.+++... .......+..+ ..+..++|+ +.++++-...+.|..++.+..... ..+... -.
T Consensus 12 ~~~I~~i~l~~~-------~~~~~~~~~~~----~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~-l~ 79 (318)
T 3sov_A 12 RRDLRLVDATNG-------KENATIVVGGL----EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG-LL 79 (318)
T ss_dssp EEEEEEEETTCT-------TSCCEEEEEEE----EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEEC-CS
T ss_pred cCeEEEEECCCC-------ceEEEEEecCC----CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCC-CC
Confidence 467888887651 11111222221 246688887 455666666788999998866322 222222 34
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEe--CCCeEEEEEccCC
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVG--RDDCLAMVNLVRG 162 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--~d~~i~~wd~~~~ 162 (343)
....+++.+.+. .++++-...+.|.+++++.......+.........++++|.+..|+.+. ..+.|...++...
T Consensus 80 ~p~glavd~~~g----~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 155 (318)
T 3sov_A 80 SPDGLACDWLGE----KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS 155 (318)
T ss_dssp CCCEEEEETTTT----EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC
T ss_pred CccEEEEEcCCC----eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC
Confidence 567888887541 5566666778999999876433222223345678999998765555555 3578888887644
Q ss_pred ceeEEEEc-CCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEE
Q 019326 163 RRSFYHKI-GKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWD 238 (343)
Q Consensus 163 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d 238 (343)
........ -.....+++++++..++.+ ..+.|..+++.......... .......+++..+.++++-...+.|..++
T Consensus 156 ~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 156 SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACN 235 (318)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEE
Confidence 33222222 2457889999988888777 57789999886433222222 23445666665566677767788999999
Q ss_pred CCCCceeEEecccccccEEEEEEE
Q 019326 239 TNSGKVAYCIEDAHSARVKGIVVL 262 (343)
Q Consensus 239 ~~~~~~~~~~~~~h~~~v~~~~~~ 262 (343)
..+++....+. .....+.++++.
T Consensus 236 ~~~G~~~~~i~-~~~~~P~~i~v~ 258 (318)
T 3sov_A 236 KYTGEGLREIH-SDIFSPMDIHAF 258 (318)
T ss_dssp TTTCCSCEEEE-CCCSSCCCEEEE
T ss_pred CCCCCceEEEe-CCCCCCcEEEEe
Confidence 98888766665 332334445443
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.85 E-value=2e-05 Score=66.76 Aligned_cols=231 Identities=10% Similarity=-0.002 Sum_probs=144.0
Q ss_pred EEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceee
Q 019326 46 TTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLT 124 (343)
Q Consensus 46 ~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 124 (343)
+|.+.. ..+|+.+. ...|+..++........+... .....++|.+... .++++-...+.|..+++.......
T Consensus 80 ~C~~~~~~~~l~~~~-~~~I~~i~~~~~~~~~~~~~~--~~~~gl~~d~~~~----~ly~~D~~~~~I~r~~~~g~~~~~ 152 (386)
T 3v65_B 80 SCKALGPEPVLLFAN-RIDIRQVLPHRSEYTLLLNNL--ENAIALDFHHRRE----LVFWSDVTLDRILRANLNGSNVEE 152 (386)
T ss_dssp CEEECSSCCEEEEEC-BSCEEEECTTSCCCEEEECSC--SCEEEEEEETTTT----EEEEEETTTTEEEEEETTSCCEEE
T ss_pred eECCccccceeEeec-CccceeeccCCCcEEEEecCC--CccEEEEEecCCC----eEEEEeCCCCcEEEEecCCCCcEE
Confidence 344444 33444433 356888888866554444433 6688999997651 455565667899999988755333
Q ss_pred eeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEEEcC-CcceEEEEeCCCCEEEEE--eC-CcEEEEEc
Q 019326 125 SVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHKIG-KEASLIKFDGSGEKFFMV--TE-EKVGIHQA 199 (343)
Q Consensus 125 ~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~-~~i~~~d~ 199 (343)
.+.........+++.+.+ +++++-...+.|.+.++............ ..+..++++|.+..++.+ .. +.|..+++
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 333223345678898754 45555566788998888755433333222 567889999987777776 34 67888887
Q ss_pred ccceeEEEec-CCcceEEeeec-CCC-eEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeE
Q 019326 200 EDAKLLCELD-GKKRILCAAPG-ENG-VLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYL 276 (343)
Q Consensus 200 ~~~~~~~~~~-~~~~i~~~~~~-~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 276 (343)
.......... .-.....++++ .++ +.++-+..+.|..+|+........+. .......+|++. .+. +
T Consensus 233 dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~P~giav~-~~~---------l 301 (386)
T 3v65_B 233 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS-QGLPHPFAITVF-EDS---------L 301 (386)
T ss_dssp TSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC-SSCSSEEEEEEE-TTE---------E
T ss_pred CCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE-CCCCCceEEEEE-CCE---------E
Confidence 6543333332 33446788887 344 44555567889999987443333333 334456788883 332 6
Q ss_pred EEEEcCCCcEEEEeccCc
Q 019326 277 VASASSDGVICVWDVRMA 294 (343)
Q Consensus 277 l~s~~~dg~i~vwd~~~~ 294 (343)
+++-...+.|..++..++
T Consensus 302 y~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 302 YWTDWHTKSINSANKFTG 319 (386)
T ss_dssp EEEETTTTEEEEEETTTC
T ss_pred EEeeCCCCeEEEEECCCC
Confidence 677777788888885554
No 268
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.84 E-value=1.1e-05 Score=66.51 Aligned_cols=189 Identities=8% Similarity=-0.051 Sum_probs=119.8
Q ss_pred CeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEec----cCCCCCeEEEEEeC-CCCCCCCceEEEeeC--------
Q 019326 44 PITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIH----HHESSSVTSLAFYT-PQNLSVPRNLFSTSA-------- 108 (343)
Q Consensus 44 ~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~v~~l~~~~-~~~~~~~~~l~s~~~-------- 108 (343)
.+..++++ ...|+.+...+.|..+|..+++. ..+. +........+++.+ ++ ++.++-..
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G-----~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTG-----IVYFTDVSTLYDDRGV 154 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTC-----CEEEEESCSSCCTTCH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCC-----EEEEECCccccccccc
Confidence 57888887 45677776666688898776532 2221 11124578899999 87 45554322
Q ss_pred ---------CCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEE-eCCCeEEEEEccCC---ceeEEEEcCCcce
Q 019326 109 ---------DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTV-GRDDCLAMVNLVRG---RRSFYHKIGKEAS 175 (343)
Q Consensus 109 ---------dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~~d~~i~~wd~~~~---~~~~~~~~~~~~~ 175 (343)
++.|..||..+++...... .......++++|+++.|+.+ ...+.|..|++... .......... +.
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~ 232 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PG 232 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EE
T ss_pred ceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CC
Confidence 3678889987665432222 22345679999999866555 55689999998753 2211122334 77
Q ss_pred EEEEeCCCCEEEEE-e----------CCcEEEEEcccceeEEEecCC-----cceEEeeecCCCeEEEEeCCCcEEEEEC
Q 019326 176 LIKFDGSGEKFFMV-T----------EEKVGIHQAEDAKLLCELDGK-----KRILCAAPGENGVLFTGGEDRSITAWDT 239 (343)
Q Consensus 176 ~~~~~~~~~~~~~~-~----------~~~i~~~d~~~~~~~~~~~~~-----~~i~~~~~~~~~~l~~~~~dg~i~i~d~ 239 (343)
.++++++|+++++. . .+.|..+|. .++.+..+... ..+.++++.++.++++....+.|..+++
T Consensus 233 gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 233 NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC
T ss_pred CeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEec
Confidence 89999999877666 4 356888886 46666666522 3455666645555555556788999987
Q ss_pred CC
Q 019326 240 NS 241 (343)
Q Consensus 240 ~~ 241 (343)
..
T Consensus 312 ~~ 313 (322)
T 2fp8_A 312 DK 313 (322)
T ss_dssp --
T ss_pred cc
Confidence 63
No 269
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.83 E-value=2.5e-05 Score=71.90 Aligned_cols=215 Identities=13% Similarity=0.028 Sum_probs=137.1
Q ss_pred CCCeEEEEec---CceEEEeeCCCeEEEEEcCCC----eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEE
Q 019326 42 LSPITTVAVS---GTAAASGGTDDTIHLYDLSTS----SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSI 114 (343)
Q Consensus 42 ~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 114 (343)
...+..|+|+ +.++++-...+.|+.+++... .....+... ......|++.+.+. +++++-...+.|.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~-l~~P~GLAvD~~~~----~LY~tD~~~~~I~v 497 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWIHS----NIYWTDSVLGTVSV 497 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS-CSCCCEEEEETTTT----EEEEEETTTTEEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecC-CCCcceeeeeecCC----cEEEEecCCCeEEE
Confidence 4567788887 445555566788998988753 223333323 45677899987762 46666667889999
Q ss_pred EECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC--CCeEEEEEccCCceeEEEEcC-CcceEEEEeCCCCEEEEE--
Q 019326 115 FDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR--DDCLAMVNLVRGRRSFYHKIG-KEASLIKFDGSGEKFFMV-- 189 (343)
Q Consensus 115 wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-- 189 (343)
.+++.......+.........|+++|....|+.... .+.|...++............ ..+..|++++.+..|+.+
T Consensus 498 ~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 498 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp EETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeC
Confidence 999765433333334456889999997655655543 368888888755543333333 568889999888888877
Q ss_pred eCCcEEEEEcccceeEEEecC---CcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEE
Q 019326 190 TEEKVGIHQAEDAKLLCELDG---KKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVL 262 (343)
Q Consensus 190 ~~~~i~~~d~~~~~~~~~~~~---~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~ 262 (343)
..+.|..+++........+.. -.....+++..+.++++-...+.|...|..+++.+..+. .......+|++.
T Consensus 578 ~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~-~~l~~P~~i~v~ 652 (791)
T 3m0c_C 578 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA-ENLLSPEDMVLF 652 (791)
T ss_dssp TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE-CSCSCCCCEEEE
T ss_pred CCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEee-cCCCCceeEeee
Confidence 567788888865444333331 223456666555566666677889999988887666665 223333444443
No 270
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.81 E-value=1.4e-05 Score=65.47 Aligned_cols=232 Identities=9% Similarity=-0.041 Sum_probs=136.2
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC
Q 019326 72 SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD 151 (343)
Q Consensus 72 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d 151 (343)
.+.+..+... .....++|.+++ +++++-..++.|..||... +....+. ....+..+++.++++++++....
T Consensus 22 ~~~~~~~p~~--~~pegia~~~~g-----~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~ 92 (306)
T 2p4o_A 22 AKIITSFPVN--TFLENLASAPDG-----TIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNA 92 (306)
T ss_dssp EEEEEEECTT--CCEEEEEECTTS-----CEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECT
T ss_pred ceEeEeCCCC--CCcceEEECCCC-----CEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccC
Confidence 3445555433 567889999988 6666666789999999875 3333333 34568899999999866655433
Q ss_pred --CeEEEEEccCCceeEEEEcC--CcceEEEEeCCCCEEEEE-eCCcEEEEEcccce--eEEEe------c---CCcceE
Q 019326 152 --DCLAMVNLVRGRRSFYHKIG--KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAK--LLCEL------D---GKKRIL 215 (343)
Q Consensus 152 --~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~--~~~~~------~---~~~~i~ 215 (343)
..|..+|..+++........ .....++..+.+..+++- ..+.|..+|...++ ..... . .-....
T Consensus 93 ~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pn 172 (306)
T 2p4o_A 93 DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN 172 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCC
Confidence 24777787777754443332 223445555555444444 57888888876542 21100 0 112234
Q ss_pred EeeecCCC-eEEEEeCCCcEEEEECCC-Cce--eEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEec
Q 019326 216 CAAPGENG-VLFTGGEDRSITAWDTNS-GKV--AYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 216 ~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
.+.. +++ ++++-...+.|..|++.. ++. ...+. .......+++.+++. ++++....+.|.+++.
T Consensus 173 gis~-dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~--~~~~P~gi~vd~dG~---------l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 173 GLKR-FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV--EQTNIDDFAFDVEGN---------LYGATHIYNSVVRIAP 240 (306)
T ss_dssp EEEE-ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE--ESCCCSSEEEBTTCC---------EEEECBTTCCEEEECT
T ss_pred CcCc-CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe--ccCCCCCeEECCCCC---------EEEEeCCCCeEEEECC
Confidence 4433 444 445556678999999874 321 11221 113456677777765 7777777789999987
Q ss_pred cCccccCCCcccccccc-cceeEEEcC---CCCceeccccC
Q 019326 292 RMAIKEKPLPLAEAKTN-SRLTCLAGS---STKSFKRPQIG 328 (343)
Q Consensus 292 ~~~~~~~~~~~~~~~~~-~~i~~~~~s---~~~~~~~~~~~ 328 (343)
. +... .+...... ....++++. +++..+.....
T Consensus 241 ~-G~~~---~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 241 D-RSTT---IIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp T-CCEE---EEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred C-CCEE---EEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 5 3211 11112222 458899998 77655444433
No 271
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.78 E-value=4.5e-05 Score=63.57 Aligned_cols=235 Identities=10% Similarity=-0.017 Sum_probs=145.5
Q ss_pred CCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc
Q 019326 42 LSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120 (343)
Q Consensus 42 ~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 120 (343)
....+|.+.. ..+|+.+. ...|+..++........+... ..+..++|.+..+ .++++-...+.|..+++...
T Consensus 33 ~d~~~C~~~~~~~~ll~~~-~~~I~~i~~~g~~~~~~~~~~--~~~~~l~~d~~~~----~ly~~D~~~~~I~r~~~~g~ 105 (349)
T 3v64_C 33 PDRRSCKALGPEPVLLFAN-RIDIRQVLPHRSEYTLLLNNL--ENAIALDFHHRRE----LVFWSDVTLDRILRANLNGS 105 (349)
T ss_dssp TTSSCEEESSSCCEEEEEC-BSCEEEECTTSCCEEEEECSC--SCEEEEEEETTTT----EEEEEETTTTEEEEEETTSC
T ss_pred CCCCcccccccCceeEeec-ccceEEEeCCCCeeEEeecCC--CceEEEEEecccc----EEEEEeccCCceEEEecCCC
Confidence 3445566655 34444433 355888888765554444433 5688999997661 45555556789999998775
Q ss_pred ceeeeeeeccccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCceeEEEEc-CCcceEEEEeCCCCEEEEE--eC-CcEE
Q 019326 121 VLLTSVKVHKKGVNDLAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHKI-GKEASLIKFDGSGEKFFMV--TE-EKVG 195 (343)
Q Consensus 121 ~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~-~~i~ 195 (343)
.....+.........+++.+.+ +++++-...+.|.+.++........... -..+..++++|.+..++.+ .. +.|.
T Consensus 106 ~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~ 185 (349)
T 3v64_C 106 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 185 (349)
T ss_dssp SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEE
Confidence 5333333223455789999754 4555656678999999876543333322 2567889999977777666 34 6788
Q ss_pred EEEcccceeEEEec-CCcceEEeeec-CCCeE-EEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCC
Q 019326 196 IHQAEDAKLLCELD-GKKRILCAAPG-ENGVL-FTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAE 272 (343)
Q Consensus 196 ~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 272 (343)
.+++.......... .-.....++++ .++.| ++-...+.|..+|+........+. .......+|++. .+.
T Consensus 186 r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~-~~~~~P~giav~-~~~------ 257 (349)
T 3v64_C 186 ASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS-QGLPHPFAITVF-EDS------ 257 (349)
T ss_dssp EEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSSEEEEEEE-TTE------
T ss_pred EEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe-CCCCCceEEEEE-CCE------
Confidence 88776433222222 23456788887 35544 444556789999987443333333 334566788883 332
Q ss_pred CCeEEEEEcCCCcEEEEeccCc
Q 019326 273 NPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 273 ~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
++++-...+.|...+..++
T Consensus 258 ---ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 258 ---LYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp ---EEEEETTTTEEEEEETTTC
T ss_pred ---EEEecCCCCeEEEEEccCC
Confidence 6666667788888875444
No 272
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.76 E-value=9.9e-05 Score=66.46 Aligned_cols=227 Identities=10% Similarity=-0.008 Sum_probs=144.4
Q ss_pred ccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEeccCCC
Q 019326 7 SYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHHHES 83 (343)
Q Consensus 7 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 83 (343)
+..+.|+..++.. ... .....+. .-..+..|+|+ +..+++-..++.|..++++.......+... .
T Consensus 12 s~~~~I~~i~l~~-------~~~---~~~~~~~-~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g-~ 79 (628)
T 4a0p_A 12 SRRADIRRISLET-------NNN---NVAIPLT-GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFG-L 79 (628)
T ss_dssp EETTEEEEEESSC-------TTC---EEECCCC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-C
T ss_pred EeCCcEEEEECCC-------CCc---ceEEEcC-CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCC-C
Confidence 3557888888875 111 1111111 23457889998 445556666789999998755443334333 3
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEe--CCCeEEEEEccC
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVG--RDDCLAMVNLVR 161 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--~d~~i~~wd~~~ 161 (343)
.....|++.+.+. +++++-...+.|.+.+++.......+...-.....|+++|....|+... ..+.|...++..
T Consensus 80 ~~P~GlAvD~~~~----~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG 155 (628)
T 4a0p_A 80 DYPEGMAVDWLGK----NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG 155 (628)
T ss_dssp SCCCEEEEETTTT----EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCcceEEEEeCCC----EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCC
Confidence 5577888887651 4566666678999999876433222223334678999998655555554 256788888766
Q ss_pred CceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEEC
Q 019326 162 GRRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDT 239 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~ 239 (343)
.........-..+..+++++++..|+.+ ..+.|..+++.................+++..+.++++-...+.|...|.
T Consensus 156 ~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 156 SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANK 235 (628)
T ss_dssp CSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEEC
Confidence 5544444444678899999988888888 57788899986543321112333445677656556666666889999998
Q ss_pred CCCceeEEec
Q 019326 240 NSGKVAYCIE 249 (343)
Q Consensus 240 ~~~~~~~~~~ 249 (343)
.+++....+.
T Consensus 236 ~tg~~~~~l~ 245 (628)
T 4a0p_A 236 TSGQNRTIIQ 245 (628)
T ss_dssp TTCCSCEEEE
T ss_pred CCCCceEEEe
Confidence 7776555444
No 273
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.76 E-value=4.6e-05 Score=62.31 Aligned_cols=222 Identities=10% Similarity=0.006 Sum_probs=129.5
Q ss_pred eEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-
Q 019326 32 LTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA- 108 (343)
Q Consensus 32 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~- 108 (343)
.+.+..+... .....++|+ ++++++-..++.|..||.+.. ....+.. ......+++.+++ +++++...
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~--~~~p~gia~~~dG-----~l~vad~~~ 92 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV--EGKVSGLAFTSNG-----DLVATGWNA 92 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC--SSEEEEEEECTTS-----CEEEEEECT
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC--CCCceeEEEcCCC-----cEEEEeccC
Confidence 3444555432 567889997 665666557899999998753 3333333 3578899999998 55554433
Q ss_pred CC-eEEEEECCCcceeeeeee-ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCce-eEEEE-------c-C--Ccce
Q 019326 109 DG-FVSIFDADPFVLLTSVKV-HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRR-SFYHK-------I-G--KEAS 175 (343)
Q Consensus 109 dg-~i~iwd~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~-------~-~--~~~~ 175 (343)
++ .|..+|..+++....... .......++..+++..+++-..++.|..+|..+++. +.... . . ....
T Consensus 93 ~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pn 172 (306)
T 2p4o_A 93 DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN 172 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCC
Confidence 22 477777777664332221 112334555555555555555688999999875431 11110 0 1 1234
Q ss_pred EEEEeCCCCEEEEE--eCCcEEEEEccc-cee--EEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCCceeE--E
Q 019326 176 LIKFDGSGEKFFMV--TEEKVGIHQAED-AKL--LCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAY--C 247 (343)
Q Consensus 176 ~~~~~~~~~~~~~~--~~~~i~~~d~~~-~~~--~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~--~ 247 (343)
.+ ++++..++++ ..+.|..|++.. ++. ...+........++++ ++++.++....+.|.++|.. ++... .
T Consensus 173 gi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~ 249 (306)
T 2p4o_A 173 GL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQ 249 (306)
T ss_dssp EE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEEC
T ss_pred Cc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEee
Confidence 44 7888877777 578899999864 321 1111111233445665 45555555567889999975 65532 2
Q ss_pred ecccccccEEEEEEE---ecCC
Q 019326 248 IEDAHSARVKGIVVL---TKND 266 (343)
Q Consensus 248 ~~~~h~~~v~~~~~~---~~~~ 266 (343)
+. .....+++++|. +++.
T Consensus 250 ~~-~~~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 250 AE-QGVIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp GG-GTCTTEEEEEECCSTTTTT
T ss_pred cc-cccCCceEEEEecccCCCC
Confidence 33 233567889987 5544
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=0.00013 Score=62.68 Aligned_cols=149 Identities=12% Similarity=0.078 Sum_probs=97.6
Q ss_pred CeEEEEec---CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-CC----eEEEE
Q 019326 44 PITTVAVS---GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-DG----FVSIF 115 (343)
Q Consensus 44 ~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-dg----~i~iw 115 (343)
....|+++ +..|+.+...+.|+.+|++++....... . ......++|++++ +.|+.+.. ++ .+..+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~-~~~P~~ia~d~~G-----~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-G-LSKVRTICWTHEA-----DSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-C-CSCEEEEEECTTS-----SEEEEEECCSCTTSEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-C-CCCcceEEEeCCC-----CEEEEEeCCCCcccceEEEE
Confidence 34567776 2556666655889999988766544433 3 4678899999998 65555554 22 34444
Q ss_pred ECCCccee--eeeeeccccEEEEEEec-CCCEEEEEeCCCeEEEEEccCCceeEEEEcC--CcceEEEEeCCCCEEEEE-
Q 019326 116 DADPFVLL--TSVKVHKKGVNDLAVHH-SGKLALTVGRDDCLAMVNLVRGRRSFYHKIG--KEASLIKFDGSGEKFFMV- 189 (343)
Q Consensus 116 d~~~~~~~--~~~~~~~~~v~~i~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~- 189 (343)
+. .+... ..+.. ......++++| ++.++++-..++.|..++...+......... .....++++|++++++.+
T Consensus 211 ~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 211 TR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp EG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred eC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 43 22222 22322 23456788999 6777777667889999998876543333332 357889999999976666
Q ss_pred -eCCcEEEEEccc
Q 019326 190 -TEEKVGIHQAED 201 (343)
Q Consensus 190 -~~~~i~~~d~~~ 201 (343)
..+.|..++...
T Consensus 289 ~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 289 VNQHYILRSDYDW 301 (430)
T ss_dssp TTTTEEEEEEEET
T ss_pred CCCCEEEEEeCCc
Confidence 678888887653
No 275
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.62 E-value=2.3e-06 Score=77.83 Aligned_cols=262 Identities=9% Similarity=-0.020 Sum_probs=142.4
Q ss_pred cCceEEEeeCCC-----------eEEEEEcCCCeee--eEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-CCeEEEEE
Q 019326 51 SGTAAASGGTDD-----------TIHLYDLSTSSSL--GAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-DGFVSIFD 116 (343)
Q Consensus 51 ~~~~l~s~~~dg-----------~i~iwd~~~~~~~--~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-dg~i~iwd 116 (343)
.+..++.|+.+. .+.+||..+++.. ..+.........++++..++ ++++.|+. +..+.+||
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g-----~lyv~GG~~~~~v~~yd 271 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNG-----QIVVTGGNDAKKTSLYD 271 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTS-----CEEEECSSSTTCEEEEE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCC-----CEEEeCCCCCCceEEec
Confidence 367777776543 5889999887532 23322213334456777777 68888884 55899999
Q ss_pred CCCcceeeeeeeccc-cEEEEEEecCCCEEEEEe-CC-----CeEEEEEccCCceeEEE-----EcCCcceEEEEeCCCC
Q 019326 117 ADPFVLLTSVKVHKK-GVNDLAVHHSGKLALTVG-RD-----DCLAMVNLVRGRRSFYH-----KIGKEASLIKFDGSGE 184 (343)
Q Consensus 117 ~~~~~~~~~~~~~~~-~v~~i~~~~~~~~l~~~~-~d-----~~i~~wd~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 184 (343)
..+.+-...-..+.. .-.+++..+++++++.|+ .+ ..+.+||..+++-.... .....-....+..++.
T Consensus 272 ~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~ 351 (656)
T 1k3i_A 272 SSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNH 351 (656)
T ss_dssp GGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCS
T ss_pred CcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCc
Confidence 876432221111111 113455667889999998 34 56899999877643321 1111000011123333
Q ss_pred EEEEE-e---------CCcEEEEEcccceeEEEec-CC---------cceEEeee--cCCCeEEEEeCCC----------
Q 019326 185 KFFMV-T---------EEKVGIHQAEDAKLLCELD-GK---------KRILCAAP--GENGVLFTGGEDR---------- 232 (343)
Q Consensus 185 ~~~~~-~---------~~~i~~~d~~~~~~~~~~~-~~---------~~i~~~~~--~~~~~l~~~~~dg---------- 232 (343)
.++.+ . ...+..||..+........ .. ..-.++.+ .++.+++.|+.++
T Consensus 352 iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~ 431 (656)
T 1k3i_A 352 AWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNA 431 (656)
T ss_dssp CCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCE
T ss_pred eEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcc
Confidence 33333 2 3456788887765433322 11 12233333 2567777777532
Q ss_pred -cEEEEECCCCceeEEe-ccccccc-EEEEEEEecCCCCCCCCCCeEEEEEcCC-----------CcEEEEeccCccccC
Q 019326 233 -SITAWDTNSGKVAYCI-EDAHSAR-VKGIVVLTKNDGGSTAENPYLVASASSD-----------GVICVWDVRMAIKEK 298 (343)
Q Consensus 233 -~i~i~d~~~~~~~~~~-~~~h~~~-v~~~~~~~~~~~~~~~~~~~~l~s~~~d-----------g~i~vwd~~~~~~~~ 298 (343)
.|.+||..+.+-.... ...+... -.+++..+++. +++.|+.+ ..+.+||..+..-..
T Consensus 432 ~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~---------i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~ 502 (656)
T 1k3i_A 432 HIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGS---------TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK 502 (656)
T ss_dssp EEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSC---------EEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE
T ss_pred eEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCC---------EEEECCcccCcCcCCCCcccceEEEcCCCCceee
Confidence 6788888776543332 1122222 23444555665 88888854 468999998764221
Q ss_pred CCcccccccccceeEEEcCCCCceeccccC
Q 019326 299 PLPLAEAKTNSRLTCLAGSSTKSFKRPQIG 328 (343)
Q Consensus 299 ~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~ 328 (343)
..+.. .......+....+++++++.|..
T Consensus 503 ~~~~~--~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 503 QNPNS--IVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCCS--SCCCTTEEEEECTTSCEEEEECC
T ss_pred cCCCC--CccccccHhhcCCCcEEEecCCC
Confidence 11111 11111223445688888888875
No 276
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.62 E-value=6.7e-05 Score=61.37 Aligned_cols=192 Identities=15% Similarity=0.230 Sum_probs=127.2
Q ss_pred ceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCc--eEEEeeC---CCeEEEEECC--Ccceeee
Q 019326 53 TAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPR--NLFSTSA---DGFVSIFDAD--PFVLLTS 125 (343)
Q Consensus 53 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~--~l~s~~~---dg~i~iwd~~--~~~~~~~ 125 (343)
..++.....+-+.+||+ +|+.+..+.. +.++.+...|.-.+.... ++++... +++|.+|+++ ++ .+..
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~ 115 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQS 115 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEE
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceee
Confidence 45666667788999999 7888888753 467777776632000001 2333333 5799999773 33 2433
Q ss_pred eee------cc-ccEEEEEE--ecC-CC-EEEEEeCCCeEEEEEcc-------CCceeEEEEcCCcceEEEEeCCCCEEE
Q 019326 126 VKV------HK-KGVNDLAV--HHS-GK-LALTVGRDDCLAMVNLV-------RGRRSFYHKIGKEASLIKFDGSGEKFF 187 (343)
Q Consensus 126 ~~~------~~-~~v~~i~~--~~~-~~-~l~~~~~d~~i~~wd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
+.. .. ..+..+++ +|. +. ++++...+|.+..|++. +.+.+..+..+.++..|...+....++
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLY 195 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEE
Confidence 311 11 45666777 664 43 68888889999999983 335677888889999999999989999
Q ss_pred EE-eCCcEEEEEcc-----cceeEEEecCC---cceEEeeec---CC-CeEEEEe-CCCcEEEEECC-CCceeEEec
Q 019326 188 MV-TEEKVGIHQAE-----DAKLLCELDGK---KRILCAAPG---EN-GVLFTGG-EDRSITAWDTN-SGKVAYCIE 249 (343)
Q Consensus 188 ~~-~~~~i~~~d~~-----~~~~~~~~~~~---~~i~~~~~~---~~-~~l~~~~-~dg~i~i~d~~-~~~~~~~~~ 249 (343)
++ .+..|..|+.+ +.+.+..+... ..+..+++. ++ ++|++++ .+.+..+||.. +.+.+..+.
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 98 66667777754 34555555422 356777663 22 3565555 67799999997 667777764
No 277
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.60 E-value=0.00015 Score=59.83 Aligned_cols=229 Identities=11% Similarity=0.072 Sum_probs=130.4
Q ss_pred CCCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEec---cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC
Q 019326 42 LSPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIH---HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD 118 (343)
Q Consensus 42 ~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 118 (343)
...+.+|.|.++.++.++.++.|.. ..+.++.-.... .. ...+..+.+.+++ ..++ ++.+|.|.. ..+
T Consensus 79 ~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~-~~~~~~i~~~~~~-----~~~~-~~~~g~v~~-S~D 149 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKL-PGSPRLIKALGNG-----SAEM-ITNVGAIYR-TKD 149 (327)
T ss_dssp CCEEEEEEEETTEEEEEEETTEEEE-ESSTTSSCEECCCCTTC-SSCEEEEEEEETT-----EEEE-EETTCCEEE-ESS
T ss_pred CccEEEEEecCCeEEEEECCCeEEE-ECCCCCCceECccccCC-CCCeEEEEEECCC-----CEEE-EeCCccEEE-EcC
Confidence 4468888888544555566675543 333344333222 12 3457788887666 4444 445665432 122
Q ss_pred Ccceeeee-eeccccEEEEEEecCCCEEEEEeCCCeEEEEEc--cCCceeEEEEcCCcceEEEEeCCCCEEEEEeCCcEE
Q 019326 119 PFVLLTSV-KVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL--VRGRRSFYHKIGKEASLIKFDGSGEKFFMVTEEKVG 195 (343)
Q Consensus 119 ~~~~~~~~-~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 195 (343)
.++.-... ......+..+++.+++.+++.+...+..+-.|- .+-+.+ .......+..+.+.+++..++++.++.+.
T Consensus 150 gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~~~~~~G~~~ 228 (327)
T 2xbg_A 150 SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH-NRTTSRRLHNMGFTPDGRLWMIVNGGKIA 228 (327)
T ss_dssp TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE-ECCSSSCEEEEEECTTSCEEEEETTTEEE
T ss_pred CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC-CCCCCCccceeEECCCCCEEEEeCCceEE
Confidence 22221111 234457889999998877766644433333332 122222 12234567778889998887777777776
Q ss_pred EEEcccceeEEEec-----CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecc--cccccEEEEEEEecCCCC
Q 019326 196 IHQAEDAKLLCELD-----GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIED--AHSARVKGIVVLTKNDGG 268 (343)
Q Consensus 196 ~~d~~~~~~~~~~~-----~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~ 268 (343)
+.+...++....+. ....+..+.+.++..+++++.+|.| .+....++.-..+.. .+...+.++.+.+++
T Consensus 229 ~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~--- 304 (327)
T 2xbg_A 229 FSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD--- 304 (327)
T ss_dssp EEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT---
T ss_pred EecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC---
Confidence 65433344444333 2235788888755555555667777 455555655554441 123567888887544
Q ss_pred CCCCCCeEEEEEcCCCcEEEEec
Q 019326 269 STAENPYLVASASSDGVICVWDV 291 (343)
Q Consensus 269 ~~~~~~~~l~s~~~dg~i~vwd~ 291 (343)
.++.++.+|.|.-++-
T Consensus 305 -------~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 305 -------QGFILGQKGILLRYVT 320 (327)
T ss_dssp -------EEEEECSTTEEEEECC
T ss_pred -------ceEEEcCCceEEEEcC
Confidence 6778888998776654
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.60 E-value=5.4e-05 Score=65.01 Aligned_cols=228 Identities=11% Similarity=0.057 Sum_probs=134.1
Q ss_pred CeEEEEecC----ceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC-----eEEE
Q 019326 44 PITTVAVSG----TAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG-----FVSI 114 (343)
Q Consensus 44 ~v~~l~~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg-----~i~i 114 (343)
....|+++. ..|+.+...+.|+.+|..+++...... . ......+++.+++ + |+.+...+ .+..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~-~~~P~giavd~dG-----~-lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-N-IGQCADVNFTLNG-----D-MVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-C-CSCEEEEEECTTC-----C-EEEEECCSCTTSEEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-C-CCCccEEEECCCC-----C-EEEEcCCCCcccceEEE
Confidence 456788873 566666555889999998776554443 3 4678999999999 6 44444321 2333
Q ss_pred EECCCcce-eeeeeeccccEEEEEEec-CCCEEEEEeCCCeEEEEEccCCce-eEEEEcC--CcceEEEEeCCCCEEEEE
Q 019326 115 FDADPFVL-LTSVKVHKKGVNDLAVHH-SGKLALTVGRDDCLAMVNLVRGRR-SFYHKIG--KEASLIKFDGSGEKFFMV 189 (343)
Q Consensus 115 wd~~~~~~-~~~~~~~~~~v~~i~~~~-~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~ 189 (343)
.+...... ...+. .......++++| ++.++++-..++.|+.+|..++.. ....... .....++++|+++.++.+
T Consensus 212 ~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 212 FTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp ECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred EECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 33322111 01222 233456788999 666666666778899999887765 2222222 223469999999977776
Q ss_pred --eCCcEEEEEcc--cceeE--EEecC----------------CcceEEeee---------cCC-CeEEEEeCCCcEEEE
Q 019326 190 --TEEKVGIHQAE--DAKLL--CELDG----------------KKRILCAAP---------GEN-GVLFTGGEDRSITAW 237 (343)
Q Consensus 190 --~~~~i~~~d~~--~~~~~--~~~~~----------------~~~i~~~~~---------~~~-~~l~~~~~dg~i~i~ 237 (343)
..+.|..++.. ++... ..+.. -.....+++ ..+ ++.++-...+.|+.+
T Consensus 291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~ 370 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVL 370 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEE
T ss_pred eCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEE
Confidence 56788887765 22211 11110 122456777 444 344455556789998
Q ss_pred ECCCCceeEEecccc------------------cccEEEEEEE-ecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 238 DTNSGKVAYCIEDAH------------------SARVKGIVVL-TKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 238 d~~~~~~~~~~~~~h------------------~~~v~~~~~~-~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+. ++.. ..+- +. -....+|++. +++. ++++=...++|+.++++
T Consensus 371 ~~-~G~v-~t~~-G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~---------lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 371 TP-EGRV-TTYA-GRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKC---------FYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CT-TSEE-EEEE-CCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTE---------EEEEEGGGTEEEEEEEC
T ss_pred CC-CCCE-EEEE-eCCCCCccccCCCccccccEeCCCcEEEEECCCCE---------EEEEeCCCCEEEEEecC
Confidence 85 4543 3332 11 1236778887 4443 55555566777777664
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.58 E-value=0.00017 Score=59.20 Aligned_cols=215 Identities=13% Similarity=0.089 Sum_probs=134.5
Q ss_pred CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC---cceeee-eeeccccEEEEE
Q 019326 62 DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP---FVLLTS-VKVHKKGVNDLA 137 (343)
Q Consensus 62 g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---~~~~~~-~~~~~~~v~~i~ 137 (343)
..|+..|+.+.+....+.. ......++|.+.++ ..+++-..++.|..+++.+ +..... +...-.....++
T Consensus 10 ~~I~~i~~~~~~~~~~~~~--~~~p~g~~~d~~~~----~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 83 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASN----RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 83 (316)
T ss_dssp SSEEEEETTSCCCEEEECS--CSSEEEEEEETTTT----EEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred CeEEEEECCCcceEehhcC--CCceEEEEEEeCCC----EEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEE
Confidence 4589999988766555543 36788999998661 4555656678999999876 122222 222223557899
Q ss_pred EecCC-CEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE--eC-CcEEEEEcccceeEEEe-c-C
Q 019326 138 VHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV--TE-EKVGIHQAEDAKLLCEL-D-G 210 (343)
Q Consensus 138 ~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~-~~i~~~d~~~~~~~~~~-~-~ 210 (343)
+.+.+ +..++-...+.|.+.++.......... ....+..++++|.+..++.+ .. +.|..+++... ....+ . .
T Consensus 84 vd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~ 162 (316)
T 1ijq_A 84 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTEN 162 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSS
T ss_pred EeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECC
Confidence 98754 455555678899999987654433333 23567889999977766666 32 67888877543 33333 2 2
Q ss_pred CcceEEeeec-CCCeE-EEEeCCCcEEEEECCCCceeEEecc--cccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcE
Q 019326 211 KKRILCAAPG-ENGVL-FTGGEDRSITAWDTNSGKVAYCIED--AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVI 286 (343)
Q Consensus 211 ~~~i~~~~~~-~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i 286 (343)
-.....++++ +++.| ++-+..+.|..+|+.. .....+.. .......+|++.. +. ++++-...+.|
T Consensus 163 ~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~~-~~---------ly~~d~~~~~V 231 (316)
T 1ijq_A 163 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFE-DK---------VFWTDIINEAI 231 (316)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEET-TE---------EEEEETTTTEE
T ss_pred CCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEEC-CE---------EEEEECCCCeE
Confidence 3456788887 34555 4445667899999874 33333321 1234467788753 32 66677777889
Q ss_pred EEEeccCc
Q 019326 287 CVWDVRMA 294 (343)
Q Consensus 287 ~vwd~~~~ 294 (343)
..++..++
T Consensus 232 ~~~~~~~g 239 (316)
T 1ijq_A 232 FSANRLTG 239 (316)
T ss_dssp EEEETTTC
T ss_pred EEEeCCCC
Confidence 88887655
No 280
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.56 E-value=0.0002 Score=59.13 Aligned_cols=262 Identities=9% Similarity=-0.050 Sum_probs=134.9
Q ss_pred CCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEecc---CCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC
Q 019326 42 LSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHH---HESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA 117 (343)
Q Consensus 42 ~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 117 (343)
...+.+|.|. .+.++.++..|.| +...+.++.-..... .....+.++.+.+ + ..+ .++..+.|.. ..
T Consensus 35 ~~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-----~~~-~~g~~g~i~~-S~ 105 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-----EGW-IVGEPPIMLH-TT 105 (327)
T ss_dssp SSCEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-----EEE-EEEETTEEEE-ES
T ss_pred CCcEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-----eEE-EEECCCeEEE-EC
Confidence 4579999997 4433335667765 334444432222211 1145789999986 4 344 4556675544 22
Q ss_pred CCcc---eeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEE--EcCCcceEEEEeCCCCEEEEEeCC
Q 019326 118 DPFV---LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYH--KIGKEASLIKFDGSGEKFFMVTEE 192 (343)
Q Consensus 118 ~~~~---~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 192 (343)
+.++ .+.....+.+.+..+.+.+++..++++ .++.|.. ....++.-... .....+..+.+.+++.+++++..+
T Consensus 106 DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G 183 (327)
T 2xbg_A 106 DGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRG 183 (327)
T ss_dssp STTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTS
T ss_pred CCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCC
Confidence 3232 222111123456778887776655554 4554422 11223221111 223457788899998888877666
Q ss_pred cEEEEEcccceeEEEe--cCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEeccc---ccccEEEEEEEecCCC
Q 019326 193 KVGIHQAEDAKLLCEL--DGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDA---HSARVKGIVVLTKNDG 267 (343)
Q Consensus 193 ~i~~~d~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~ 267 (343)
.+..-+-..++....+ .....+..+.+.+++.++.++.+|.+++.+...++.-..+... +...+.++++.+++.
T Consensus 184 ~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~- 262 (327)
T 2xbg_A 184 SFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE- 262 (327)
T ss_dssp SEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC-
T ss_pred cEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE-
Confidence 5544321112222222 2455677888876556667777888877643323332222211 234578888876554
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccc
Q 019326 268 GSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQ 326 (343)
Q Consensus 268 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~ 326 (343)
+++.+ .+|.| ++..+.+..-..... .......+.++.+.+++.+.+.+
T Consensus 263 --------~~~~g-~~g~i-~~S~DgG~tW~~~~~-~~~~~~~~~~v~~~~~~~~~~~G 310 (327)
T 2xbg_A 263 --------VWLAG-GAGAL-LCSQDGGQTWQQDVD-VKKVPSNFYKILFFSPDQGFILG 310 (327)
T ss_dssp --------EEEEE-STTCE-EEESSTTSSCEECGG-GTTSSSCCCEEEEEETTEEEEEC
T ss_pred --------EEEEe-CCCeE-EEeCCCCcccEEcCc-cCCCCCCeEEEEEECCCceEEEc
Confidence 55544 47766 344443321111110 00112346777776666655444
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.56 E-value=0.00026 Score=60.11 Aligned_cols=224 Identities=14% Similarity=0.080 Sum_probs=140.0
Q ss_pred eEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc----ceeeeeeec
Q 019326 54 AAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF----VLLTSVKVH 129 (343)
Q Consensus 54 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~ 129 (343)
+|+.+. ...|+..++........+.. ...+..|+|.+..+ .++++-...+.|+.+++... .....+...
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~--~~~~~~l~~d~~~~----~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASN----RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECS--CSCEEEEEEETTTT----EEEEEETTTTEEEEEEC------CCCEEEECSS
T ss_pred eeEEec-cceeEEEccCCcceeEeccc--cCcceEEeeeeccC----ceEEEecCCCeEEEEEcccCCCCCcceEEEeCC
Confidence 444433 46799999887655444443 46788999998661 45555556788999998652 222222223
Q ss_pred cccEEEEEEecC-CCEEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE--e-CCcEEEEEccccee
Q 019326 130 KKGVNDLAVHHS-GKLALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV--T-EEKVGIHQAEDAKL 204 (343)
Q Consensus 130 ~~~v~~i~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~-~~~i~~~d~~~~~~ 204 (343)
......+++.+. +++.++-...+.|.+.++.......... ....+..++++|.+..++.+ . .+.|...++.....
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~ 237 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 237 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc
Confidence 346788999984 5555566667899999987665444443 23557889999977777666 2 36788888765443
Q ss_pred EEEec-CCcceEEeeec-CCCeEEEE-eCCCcEEEEECCCCceeEEecc-cccccEEEEEEEecCCCCCCCCCCeEEEEE
Q 019326 205 LCELD-GKKRILCAAPG-ENGVLFTG-GEDRSITAWDTNSGKVAYCIED-AHSARVKGIVVLTKNDGGSTAENPYLVASA 280 (343)
Q Consensus 205 ~~~~~-~~~~i~~~~~~-~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 280 (343)
...+. .-.....++++ .++.|+.+ ...+.|..+|+........+.. .......+|++..+ . ++++-
T Consensus 238 ~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~-~---------lywtd 307 (400)
T 3p5b_L 238 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-K---------VFWTD 307 (400)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETT-E---------EEEEE
T ss_pred EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCC-E---------EEEec
Confidence 33333 23567788887 44555444 5567899999874332222220 12344567777433 2 66677
Q ss_pred cCCCcEEEEeccCc
Q 019326 281 SSDGVICVWDVRMA 294 (343)
Q Consensus 281 ~~dg~i~vwd~~~~ 294 (343)
...+.|..+|..++
T Consensus 308 ~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 308 IINEAIFSANRLTG 321 (400)
T ss_dssp SSSCSEEEEESSSC
T ss_pred CCCCeEEEEEcCCC
Confidence 77788988886655
No 282
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.50 E-value=0.00016 Score=59.20 Aligned_cols=183 Identities=16% Similarity=0.248 Sum_probs=121.1
Q ss_pred ceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecC----CC---EEEEEe-C--CCeEEEEEcc--CCceeEEE
Q 019326 101 RNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHS----GK---LALTVG-R--DDCLAMVNLV--RGRRSFYH 168 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~----~~---~l~~~~-~--d~~i~~wd~~--~~~~~~~~ 168 (343)
.+++.....+-+.+||+ +++.++.+.. +.++.+..-|+ ++ ++++.. . +++|.+|++. ++. +...
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i 116 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSM 116 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeec
Confidence 46777777889999999 7788888753 56777777663 21 233333 3 5889999773 333 2222
Q ss_pred -----E--cC-CcceEEEE--eCC-CC-EEEEE-eCCcEEEEEc-------ccceeEEEecCCcceEEeeecC-CCeEEE
Q 019326 169 -----K--IG-KEASLIKF--DGS-GE-KFFMV-TEEKVGIHQA-------EDAKLLCELDGKKRILCAAPGE-NGVLFT 227 (343)
Q Consensus 169 -----~--~~-~~~~~~~~--~~~-~~-~~~~~-~~~~i~~~d~-------~~~~~~~~~~~~~~i~~~~~~~-~~~l~~ 227 (343)
. .. ..+..+++ +|. +. ++++. .++.+..|++ .+.+.++++.....+..+...+ ...|+.
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYI 196 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEE
Confidence 1 11 45666777 664 44 45555 7899999988 3457788888777888888874 579999
Q ss_pred EeCCCcEEEEECC-----CCceeEEeccccc-ccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 228 GGEDRSITAWDTN-----SGKVAYCIEDAHS-ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 228 ~~~dg~i~i~d~~-----~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
+-++.-|..++.+ +++.+..+..++- ..+..|++.+... ..+++|+|+=.++++.+||.+
T Consensus 197 ~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~-----g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 197 AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAAD-----GKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGG-----GCEEEEEEEGGGTEEEEEESS
T ss_pred ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCC-----CCEEEEEEcCCCCEEEEEECC
Confidence 9998777777754 3455555532332 4789999865431 012245555467899999997
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.49 E-value=4.2e-07 Score=82.96 Aligned_cols=216 Identities=13% Similarity=0.024 Sum_probs=127.8
Q ss_pred CCeEEEEec--CceEE-EeeCCCeEEEEEcCC----CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEE
Q 019326 43 SPITTVAVS--GTAAA-SGGTDDTIHLYDLST----SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIF 115 (343)
Q Consensus 43 ~~v~~l~~~--~~~l~-s~~~dg~i~iwd~~~----~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 115 (343)
..+..|+|+ ++.|+ +-...+.|+.+++.+ ......+... ......|++.+.+. +++++-...+.|.++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~-~~~P~glavD~~~g----~LY~tD~~~~~I~v~ 480 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWIHS----NIYWTDSVLGTVSVA 480 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSC-C--CCCEECCCSSS----BCEECCTTTSCEEEE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCC-CCCcceEEEEeeCC----cEEEEeccCCeEEEE
Confidence 345677887 44444 444567899999875 2222222222 23455678875441 455665667899999
Q ss_pred ECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC--CCeEEEEEccCCceeEEEEc-CCcceEEEEeCCCCEEEEE--e
Q 019326 116 DADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR--DDCLAMVNLVRGRRSFYHKI-GKEASLIKFDGSGEKFFMV--T 190 (343)
Q Consensus 116 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~--d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~ 190 (343)
++........+.........|+++|.+..|+.+.. .+.|..+++........... -..+..++++|++..|+.+ .
T Consensus 481 d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 481 DTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp BSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT
T ss_pred ecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC
Confidence 98764433333322345678899987655554443 26788777754332222111 2456789999987777777 5
Q ss_pred CCcEEEEEcccceeEEEecC---CcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEec
Q 019326 191 EEKVGIHQAEDAKLLCELDG---KKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTK 264 (343)
Q Consensus 191 ~~~i~~~d~~~~~~~~~~~~---~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~ 264 (343)
.+.|..+++........+.. ......+++..+.++++....+.|..+|..+++.+..+. .....+.+|++.+.
T Consensus 561 ~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~-~~~~~P~~i~v~~~ 636 (699)
T 1n7d_A 561 LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA-ENLLSPEDMVLFHQ 636 (699)
T ss_dssp TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC-TTCSSCCCCCBCSS
T ss_pred CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee-cCCCCCcEEEEeCc
Confidence 67899999865333222221 123345555455666677777899999998888777775 33334455554433
No 284
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.48 E-value=0.00024 Score=55.90 Aligned_cols=197 Identities=11% Similarity=0.148 Sum_probs=129.9
Q ss_pred EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeec-cccEEEEEEecCCCEEEEEeCCCeEE
Q 019326 77 AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVH-KKGVNDLAVHHSGKLALTVGRDDCLA 155 (343)
Q Consensus 77 ~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~~~~~d~~i~ 155 (343)
.+.+- ...+..+++.|+++ .++++...++.|...|.. ++.++.+... ......|++.+++.++++.-.++.+.
T Consensus 21 ~l~g~-~~~lSGla~~~~~~----~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 21 EIAGI-TNNISSLTWSAQSN----TLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIY 94 (255)
T ss_dssp ECTTC-CSCEEEEEEETTTT----EEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEE
T ss_pred ECCCc-ccCcceeEEeCCCC----EEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEE
Confidence 34455 56799999999862 455567778999999998 7777777532 24677889998887767766778899
Q ss_pred EEEccCCce---eEEEEcC-------CcceEEEEeCCCCEEEEE-eCCcEEEEEccc---ceeEEEec--------CCcc
Q 019326 156 MVNLVRGRR---SFYHKIG-------KEASLIKFDGSGEKFFMV-TEEKVGIHQAED---AKLLCELD--------GKKR 213 (343)
Q Consensus 156 ~wd~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~---~~~~~~~~--------~~~~ 213 (343)
++++..... +.....+ .....++++|.++.++++ ......+|.... ...+..+. ....
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSC
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCC
Confidence 998866542 2222221 234789999999888888 555556666541 11112121 2234
Q ss_pred eEEeeecC--CCeEEEEeCCCcEEEEECCCCceeEEecc--cc-c-----ccEEEEEEEecCCCCCCCCCCeEEEEEcCC
Q 019326 214 ILCAAPGE--NGVLFTGGEDRSITAWDTNSGKVAYCIED--AH-S-----ARVKGIVVLTKNDGGSTAENPYLVASASSD 283 (343)
Q Consensus 214 i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~h-~-----~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d 283 (343)
+..+++++ +.+++.......+..+|.. ++.+..+.- +. . ....+|++.+++. +.++ ++-
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~---------lyIv-sE~ 243 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN---------IYIV-SEP 243 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC---------EEEE-ETT
T ss_pred ceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC---------EEEE-cCC
Confidence 66777774 4577777888899999976 666655541 11 1 2668999998885 4444 666
Q ss_pred CcEEEEe
Q 019326 284 GVICVWD 290 (343)
Q Consensus 284 g~i~vwd 290 (343)
+.++.+.
T Consensus 244 n~~y~f~ 250 (255)
T 3qqz_A 244 NRFYRFT 250 (255)
T ss_dssp TEEEEEE
T ss_pred ceEEEEE
Confidence 6555554
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.45 E-value=0.00039 Score=57.05 Aligned_cols=218 Identities=10% Similarity=0.027 Sum_probs=135.7
Q ss_pred CCeEEEEEcCCCe--eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceee-eeeeccccEEEEE
Q 019326 61 DDTIHLYDLSTSS--SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLT-SVKVHKKGVNDLA 137 (343)
Q Consensus 61 dg~i~iwd~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~i~ 137 (343)
...|+..+++... ....+.. ......+.|.+..+ .++++-...+.|..+++....... .+...-.....++
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~--~~~~~~ld~d~~~~----~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gla 85 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGG--LEDAAAVDFVFSHG----LIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLA 85 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEE--EEEEEEEEEEGGGT----EEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEE
T ss_pred cCeEEEEECCCCceEEEEEecC--CCccEEEEEEeCCC----EEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEE
Confidence 4678899988763 2222222 24567899998651 455666667899999987653222 2222234567899
Q ss_pred EecC-CCEEEEEeCCCeEEEEEccCCceeEEE-EcCCcceEEEEeCCCCEEEEEe---CCcEEEEEcccceeEEEec-CC
Q 019326 138 VHHS-GKLALTVGRDDCLAMVNLVRGRRSFYH-KIGKEASLIKFDGSGEKFFMVT---EEKVGIHQAEDAKLLCELD-GK 211 (343)
Q Consensus 138 ~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~-~~ 211 (343)
+.+. ++++++-...+.|.++++......... .....+..++++|.+..++.+. .+.|..+++.......... .-
T Consensus 86 vd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l 165 (318)
T 3sov_A 86 CDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI 165 (318)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSC
T ss_pred EEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCC
Confidence 9874 455556566789999998765433332 2235678899999777666662 4677777775433222222 23
Q ss_pred cceEEeeecC-CCeEE-EEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEE
Q 019326 212 KRILCAAPGE-NGVLF-TGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVW 289 (343)
Q Consensus 212 ~~i~~~~~~~-~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw 289 (343)
.....+++++ ++.|+ +-+..+.|..+|+.... ...+.........++++..+. ++++-...+.|..+
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~P~glav~~~~----------lywtd~~~~~V~~~ 234 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHPFALTLFEDI----------LYWTDWSTHSILAC 234 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSCCSCEEEEEEETTE----------EEEEETTTTEEEEE
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEecCCCCCceEEEEeCCE----------EEEEecCCCeEEEE
Confidence 4567888873 55444 44567889999987433 333321344556778775332 66676777889988
Q ss_pred eccCcc
Q 019326 290 DVRMAI 295 (343)
Q Consensus 290 d~~~~~ 295 (343)
+..++.
T Consensus 235 ~~~~G~ 240 (318)
T 3sov_A 235 NKYTGE 240 (318)
T ss_dssp ETTTCC
T ss_pred ECCCCC
Confidence 886653
No 286
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.43 E-value=0.00032 Score=55.12 Aligned_cols=198 Identities=10% Similarity=0.095 Sum_probs=131.3
Q ss_pred EEecCCCCCeEEEEec--Cc-eEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeE
Q 019326 36 FSYPAHLSPITTVAVS--GT-AAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFV 112 (343)
Q Consensus 36 ~~~~~h~~~v~~l~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 112 (343)
+.+.+-...+..++|+ ++ ++++...++.|...|.. ++.++.+..........|++.+++ .++++.-.++.+
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g-----~~~vs~E~~~~l 93 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN-----QFVISDERDYAI 93 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT-----EEEEEETTTTEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC-----EEEEEECCCCcE
Confidence 4556666789999998 44 55557788999999998 888777743213678899999887 565665567889
Q ss_pred EEEECCCcce---eeeee------eccccEEEEEEecCCCEEEEEeCCCeEEEEEccC---CceeEEEE--------cCC
Q 019326 113 SIFDADPFVL---LTSVK------VHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR---GRRSFYHK--------IGK 172 (343)
Q Consensus 113 ~iwd~~~~~~---~~~~~------~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~---~~~~~~~~--------~~~ 172 (343)
.++++..... +.... ..+.....++|+|.++.|+++.......+|.+.. ...+.... .-.
T Consensus 94 ~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 94 YVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLD 173 (255)
T ss_dssp EEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSS
T ss_pred EEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccC
Confidence 9998754332 22221 1234568999999997777777655555555541 11112211 123
Q ss_pred cceEEEEeCCCCEEEEE--eCCcEEEEEcccceeEEEecCC----------cceEEeeecCCCeEEEEeCCCcEEEEECC
Q 019326 173 EASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKLLCELDGK----------KRILCAAPGENGVLFTGGEDRSITAWDTN 240 (343)
Q Consensus 173 ~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~----------~~i~~~~~~~~~~l~~~~~dg~i~i~d~~ 240 (343)
....++++|....+++. ....+..+|.. ++.+..+... .....+++.+.+.|+..++.+.++.|...
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~~ 252 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQ 252 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC-
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEec
Confidence 57889999977666655 66778888865 5566555522 25678889866567777888877777643
No 287
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.43 E-value=2.3e-05 Score=71.27 Aligned_cols=221 Identities=8% Similarity=0.015 Sum_probs=114.4
Q ss_pred EEEec--CceEEEeeC-CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee-CC-----CeEEEEEC
Q 019326 47 TVAVS--GTAAASGGT-DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS-AD-----GFVSIFDA 117 (343)
Q Consensus 47 ~l~~~--~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~-~d-----g~i~iwd~ 117 (343)
++++. +.+++.|+. +..+.+||..+++-...-..+....-.+++..+++ +.++.|+ .+ ..+.+||.
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg-----~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDG-----RVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTS-----CEEEECCCCCSSSCCCCEEEEET
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCC-----eEEEEeCcccCCcccccceEeCC
Confidence 34443 788888874 55799999987754332221201222345566677 6888888 34 57999999
Q ss_pred CCcceeee--e--eeccccEEEEEEecCCCEEEEEeCC---------CeEEEEEccCCceeEEEEcC----------Ccc
Q 019326 118 DPFVLLTS--V--KVHKKGVNDLAVHHSGKLALTVGRD---------DCLAMVNLVRGRRSFYHKIG----------KEA 174 (343)
Q Consensus 118 ~~~~~~~~--~--~~~~~~v~~i~~~~~~~~l~~~~~d---------~~i~~wd~~~~~~~~~~~~~----------~~~ 174 (343)
.+.+-... . ......-....+..++..++.++.+ ..+..||..+.......... ...
T Consensus 322 ~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~ 401 (656)
T 1k3i_A 322 SSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCG 401 (656)
T ss_dssp TTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTC
T ss_pred CCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCC
Confidence 76542211 0 0000000001122344444555443 45778888877643222111 122
Q ss_pred eEEEEeC-CCCEEEEE-eCC-----------cEEEEEcccceeEEEe--c--CC-cceEEeeecCCCeEEEEeCC-----
Q 019326 175 SLIKFDG-SGEKFFMV-TEE-----------KVGIHQAEDAKLLCEL--D--GK-KRILCAAPGENGVLFTGGED----- 231 (343)
Q Consensus 175 ~~~~~~~-~~~~~~~~-~~~-----------~i~~~d~~~~~~~~~~--~--~~-~~i~~~~~~~~~~l~~~~~d----- 231 (343)
.++.+.. +++.++++ .+. .+.+||..+..-.... . .. ....++...++.+++.|+.+
T Consensus 402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~ 481 (656)
T 1k3i_A 402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF 481 (656)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT
T ss_pred ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCc
Confidence 3444444 55566665 321 5778887776544432 1 11 12223333367788888754
Q ss_pred ------CcEEEEECCCCceeEEecc--cccccEEEEEEEecCCCCCCCCCCeEEEEEcC
Q 019326 232 ------RSITAWDTNSGKVAYCIED--AHSARVKGIVVLTKNDGGSTAENPYLVASASS 282 (343)
Q Consensus 232 ------g~i~i~d~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 282 (343)
..+.+||..+.+-. .+.. ..........+.+++. +++.|+.
T Consensus 482 ~~~~~~~~v~~ydp~t~~W~-~~~~~~~~R~~hs~a~ll~dg~---------v~v~GG~ 530 (656)
T 1k3i_A 482 EDSTPVFTPEIYVPEQDTFY-KQNPNSIVRVYHSISLLLPDGR---------VFNGGGG 530 (656)
T ss_dssp CCCSBCCCCEEEEGGGTEEE-ECCCCSSCCCTTEEEEECTTSC---------EEEEECC
T ss_pred CCCCcccceEEEcCCCCcee-ecCCCCCccccccHhhcCCCcE---------EEecCCC
Confidence 46899998765422 1210 1111122333445655 8888885
No 288
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.40 E-value=0.00055 Score=61.59 Aligned_cols=203 Identities=11% Similarity=0.011 Sum_probs=123.0
Q ss_pred CCCeEEEEec--CceEE-EeeCCCeEEEEEcCCCee-eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC
Q 019326 42 LSPITTVAVS--GTAAA-SGGTDDTIHLYDLSTSSS-LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA 117 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~-s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 117 (343)
...+..|+|+ ++.|+ +=...+.|..++++.... ...+... -.....|++.+.+. +++++-...+.|.+.++
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~-~~~P~GlAvD~~~~----~ly~~d~~~~~I~v~~~ 113 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG-LLSPDGLACDWLGE----KLYWTDSETNRIEVSNL 113 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSS-CSCEEEEEEETTTT----EEEEEETTTTEEEEEET
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCC-CCCcCeEEEEecCC----EEEEEeCCCCEEEEEEC
Confidence 3457788887 44444 444567899998875532 2233333 46788999998651 56666667889999999
Q ss_pred CCcceeeeeeeccccEEEEEEecCCCEEEEEeC--CCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE--eCC
Q 019326 118 DPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR--DDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV--TEE 192 (343)
Q Consensus 118 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~--d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~ 192 (343)
+.......+...-.....|+++|.+..|+.... .+.|...++.......... .-..+..+++++++..|+.+ ..+
T Consensus 114 dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~ 193 (619)
T 3s94_A 114 DGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLN 193 (619)
T ss_dssp TSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTC
T ss_pred CCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCC
Confidence 764332222233445678999997655555543 4677777765443322222 23567889999988888877 567
Q ss_pred cEEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 193 KVGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 193 ~i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
.|..+++.......... .......+++..+.++++-...+.|...|..+++....+.
T Consensus 194 ~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~ 251 (619)
T 3s94_A 194 FIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 251 (619)
T ss_dssp CEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECC
T ss_pred eEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEe
Confidence 78888886543322222 1122235555455555565667889999988876554443
No 289
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.39 E-value=0.0019 Score=62.35 Aligned_cols=280 Identities=11% Similarity=0.075 Sum_probs=153.1
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCC-cceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCC-------
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQ-KTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTS------- 72 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~------- 72 (343)
+++.+..+|.++...+....... + ...+...+..+ +....-.++++- +++|+.|+..|.=.+|.+...
T Consensus 288 ~~LL~~~~G~l~~l~l~~d~~~~--~~~~V~~l~i~~~-~~~~~~ssl~~l~~g~lFvgS~~Gds~l~~~~~~~~~~~~~ 364 (1158)
T 3ei3_A 288 RYLLGDMEGRLFMLLLEKEEQMD--GTVTLKDLRVELL-GETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSY 364 (1158)
T ss_dssp EEEEEETTCEEEEEEEEEEC-------CEEEEEEEEEE-EECSCCSEEEECSTTEEEEECSSSCEEEEEECSSCCTTSCC
T ss_pred EEEEEeCCCCEEEEEEEEcCCcc--CceeEEEEEEEEc-CCccCccEEEEECCCEEEEEEecCCcEEEEEecCCCCccce
Confidence 56777788888877775521000 0 01111112112 223344677776 779999999888777777643
Q ss_pred -eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee---CCCeEEEEECCC-cceeeeeee-ccccEEEEEEe---cCCC
Q 019326 73 -SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS---ADGFVSIFDADP-FVLLTSVKV-HKKGVNDLAVH---HSGK 143 (343)
Q Consensus 73 -~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~-~~~~~~~~~-~~~~v~~i~~~---~~~~ 143 (343)
+.+..+..- ++|.+++......... ..|++++ .+|.+++..-.- .+....+.. .-..++.+... ....
T Consensus 365 ~~~~~~~~N~--~PI~D~~v~d~~~~~~-~~i~~~sG~g~~gsL~~lr~Gi~~~~~~~~~l~gv~~iWtl~~~~~~~~~~ 441 (1158)
T 3ei3_A 365 VVAMETFTNL--GPIVDMCVVDLERQGQ-GQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDD 441 (1158)
T ss_dssp EEEEEEECCC--CSEEEEEEECTTSSSC-CEEEEEECCGGGCEEEEEEESBCEEEEEEECCCSCCEEEEECCCSSCSSCC
T ss_pred EEeEeeecCc--CCceeEEEEccCCCCC-CeEEEEECcCCCCeEEEEecCCCEEEEEeecCCCccEEEEEeecCCCCCCC
Confidence 334555544 8999998865321122 3445443 367888875421 111222211 12355555543 2246
Q ss_pred EEEEEeCCCeEEEEEccCCceeEEEEcC---CcceEEEEeC-CCCEEEEEeCCcEEEEEcccceeEEEecC--CcceEEe
Q 019326 144 LALTVGRDDCLAMVNLVRGRRSFYHKIG---KEASLIKFDG-SGEKFFMVTEEKVGIHQAEDAKLLCELDG--KKRILCA 217 (343)
Q Consensus 144 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~i~~~ 217 (343)
+|+....+.+ .++.+.. +.+...... .....+.... .+..++=.....|++++......+..+.. ...|...
T Consensus 442 yLvlS~~~~T-~Vl~i~~-e~veev~~~gf~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w~~p~~~~I~~A 519 (1158)
T 3ei3_A 442 TLVLSFVGQT-RVLMLNG-EEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVA 519 (1158)
T ss_dssp EEEEEETTEE-EEEEEET-TEEEEECCTTCCSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEECCTTCCCCCEE
T ss_pred EEEEECCCCe-EEEEEeC-CcccccccccccCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEEECCCCCEEEEE
Confidence 7777666665 4555432 222222211 1111122111 23344444777888888776666666653 3457777
Q ss_pred eecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcC-CCcEEEEeccCc
Q 019326 218 APGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASS-DGVICVWDVRMA 294 (343)
Q Consensus 218 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~ 294 (343)
+.. +..++.++ ++.+.++.+..++........-...|.++++.+...+ ...+.+++.|.. |++|+|+++.+.
T Consensus 520 s~n-~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~---~~~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 520 SCN-SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDS---NGLSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp EEC-SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSS---TTCCSEEEEEETTTTEEEEEETTTC
T ss_pred EeC-CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCC---cccccEEEEEECCCCEEEEEECCCC
Confidence 664 44555554 6788888887654222111123568999998764321 112348999997 999999999864
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.36 E-value=0.0016 Score=60.12 Aligned_cols=218 Identities=14% Similarity=0.093 Sum_probs=133.2
Q ss_pred CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc----ceeeeeeeccccEEEE
Q 019326 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF----VLLTSVKVHKKGVNDL 136 (343)
Q Consensus 61 dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~i 136 (343)
...|+..++........+.. ...+..|+|.+... .++++-...+.|+.+++... .....+.........|
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~--~~~~~gl~~d~~~~----~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GL 476 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASN----RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 476 (791)
T ss_dssp BSSEEEECTTSCCCEEEECS--CSSEEEEEEETTTT----EEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred ccceeEeeccCCcceeeecC--CCceEEEeecccCC----eeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCccee
Confidence 35688888876655444443 46788999998651 45556666788999998653 2222233233456789
Q ss_pred EEecCCC-EEEEEeCCCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE--eC-CcEEEEEcccceeEEEec-C
Q 019326 137 AVHHSGK-LALTVGRDDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV--TE-EKVGIHQAEDAKLLCELD-G 210 (343)
Q Consensus 137 ~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~-~~i~~~d~~~~~~~~~~~-~ 210 (343)
++.+.++ ++++-...+.|.+.++.......... ....+..++++|.+..|+.+ .. +.|...++........+. .
T Consensus 477 AvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~ 556 (791)
T 3m0c_C 477 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 556 (791)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS
T ss_pred eeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCC
Confidence 9998764 55555567899999987655443333 23568899999987777666 33 678888876544433333 2
Q ss_pred CcceEEeeec-CCCeEEEE-eCCCcEEEEECCCCceeEEecc-cccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEE
Q 019326 211 KKRILCAAPG-ENGVLFTG-GEDRSITAWDTNSGKVAYCIED-AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVIC 287 (343)
Q Consensus 211 ~~~i~~~~~~-~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~ 287 (343)
-.....|+++ .++.|+.+ ...+.|..+++........+.. ..-....+|++..+ . ++++-...+.|.
T Consensus 557 l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~---------lYwtD~~~~~I~ 626 (791)
T 3m0c_C 557 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-K---------VFWTDIINEAIF 626 (791)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-E---------EEEEETTTTEEE
T ss_pred CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-E---------EEEEECCCCEEE
Confidence 3567788887 34444444 4567899999864433332220 11223456666433 1 555556667777
Q ss_pred EEeccCc
Q 019326 288 VWDVRMA 294 (343)
Q Consensus 288 vwd~~~~ 294 (343)
..+..++
T Consensus 627 ~~dk~tG 633 (791)
T 3m0c_C 627 SANRLTG 633 (791)
T ss_dssp EEETTTC
T ss_pred EEeCCCC
Confidence 7776554
No 291
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.36 E-value=3.2e-05 Score=71.47 Aligned_cols=187 Identities=10% Similarity=0.025 Sum_probs=110.8
Q ss_pred CeEEEEEe-CCCCCCCCceEEEe-eCCC----eEEEEECCCc-ceee-eeeeccccEEEEEEecCCCEEEEEeCC-----
Q 019326 85 SVTSLAFY-TPQNLSVPRNLFST-SADG----FVSIFDADPF-VLLT-SVKVHKKGVNDLAVHHSGKLALTVGRD----- 151 (343)
Q Consensus 85 ~v~~l~~~-~~~~~~~~~~l~s~-~~dg----~i~iwd~~~~-~~~~-~~~~~~~~v~~i~~~~~~~~l~~~~~d----- 151 (343)
.+...+|+ |++ ++|+.+ +.+| +|+++|+.++ +.+. .+.. ....++|+||++.|+....+
T Consensus 175 ~~~~~~~S~PDG-----~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 175 DVMEVKPAPPEH-----DLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp EEEEEEECTTTT-----CEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCE
T ss_pred EEeeeEecCCCC-----CEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCC
Confidence 67889999 999 666643 3333 5999999988 6332 1221 23468899999888777654
Q ss_pred CeEEEEEccCCce--eEEEE--cCCcceEEEEeCCCCEEEEE-e---CCcEEEEEcccce-eE--EEec--CCcceEEee
Q 019326 152 DCLAMVNLVRGRR--SFYHK--IGKEASLIKFDGSGEKFFMV-T---EEKVGIHQAEDAK-LL--CELD--GKKRILCAA 218 (343)
Q Consensus 152 ~~i~~wd~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~-~---~~~i~~~d~~~~~-~~--~~~~--~~~~i~~~~ 218 (343)
..|+.+++.+++. ..... .......+.|+|++++|+.. . ...+.++|+.++. .. ..+. .........
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~ 326 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ 326 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe
Confidence 3688888877642 22222 22335568899999988877 2 3457788887652 12 3332 234455565
Q ss_pred ecCCCeEE-EEeCC----CcEEEEECCCCceeEE-ecccccc--cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEe
Q 019326 219 PGENGVLF-TGGED----RSITAWDTNSGKVAYC-IEDAHSA--RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWD 290 (343)
Q Consensus 219 ~~~~~~l~-~~~~d----g~i~i~d~~~~~~~~~-~~~~h~~--~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd 290 (343)
|+.++.|+ ....+ ..|..+|+.++..... +. .|.. .+..+.+. +. .++++...|+..++|-
T Consensus 327 ~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li-~~~~~~~l~~~~~~--~~--------~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 327 MHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLV-DHSEDVFMESIAVR--SN--------YLVVAGRRAGLTRIWT 395 (751)
T ss_dssp EETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEE-CCCSSEEEEEEEEC--SS--------EEEEEEEETTEEEEEE
T ss_pred eeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEE-CCCCCcEEEEEEEE--CC--------EEEEEEEeCCEEEEEE
Confidence 45555444 44333 3677778765322222 22 2333 44555554 22 2677777888655543
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.23 E-value=0.002 Score=55.78 Aligned_cols=232 Identities=13% Similarity=0.082 Sum_probs=134.7
Q ss_pred eEEEEecC---ceEEEee-CCCeEEEEEcCCCeeeeEeccC--CCCCeEEEEE-------eCCCCCCCCceEEEeeCCC-
Q 019326 45 ITTVAVSG---TAAASGG-TDDTIHLYDLSTSSSLGAIHHH--ESSSVTSLAF-------YTPQNLSVPRNLFSTSADG- 110 (343)
Q Consensus 45 v~~l~~~~---~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~l~~-------~~~~~~~~~~~l~s~~~dg- 110 (343)
...|+|++ ..|+.+. ..+.|++.|++++.....+... .......|+| ++++ +.|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G-----~~lyvad~~~~ 215 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEA-----EYMIVAIDYDG 215 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTT-----CEEEEEECCCT
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCC-----CEEEEEeCCCC
Confidence 45777772 3444444 3467889998877665544332 0235899999 9988 6566665543
Q ss_pred ------eEEEEECCC-ccee-----eeeeeccccEEEEEEecC-CCEEEEEeCCCeEEEEEcc-------CCce------
Q 019326 111 ------FVSIFDADP-FVLL-----TSVKVHKKGVNDLAVHHS-GKLALTVGRDDCLAMVNLV-------RGRR------ 164 (343)
Q Consensus 111 ------~i~iwd~~~-~~~~-----~~~~~~~~~v~~i~~~~~-~~~l~~~~~d~~i~~wd~~-------~~~~------ 164 (343)
.|.+++... +... ..+... .....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 266665433 2221 222222 23457888994 5556666778899999997 4543
Q ss_pred -----e-EEEEcC--CcceEEEEeCCCCEEEEE--eCCcEEEEEccc--ceeE--EEecC----C------------cce
Q 019326 165 -----S-FYHKIG--KEASLIKFDGSGEKFFMV--TEEKVGIHQAED--AKLL--CELDG----K------------KRI 214 (343)
Q Consensus 165 -----~-~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~--~~~~--~~~~~----~------------~~i 214 (343)
. .....+ .....++++|+++.++.+ ..+.|+.++... +... ..+.. . ...
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P 374 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNP 374 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSE
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCC
Confidence 1 112222 446789999999977666 677888866543 2210 11110 0 112
Q ss_pred E-Eeeec--------CCCeEEEEeCCCcEEEEECCCCceeEEecccc------------------------cccEEEEEE
Q 019326 215 L-CAAPG--------ENGVLFTGGEDRSITAWDTNSGKVAYCIEDAH------------------------SARVKGIVV 261 (343)
Q Consensus 215 ~-~~~~~--------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h------------------------~~~v~~~~~ 261 (343)
. .++.. .++++++-....+|+.++ .++. +.++- +. -....+|++
T Consensus 375 ~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~Tia-G~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav 451 (496)
T 3kya_A 375 CQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYA-GRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY 451 (496)
T ss_dssp EEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEE-ESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred eEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEe-cccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence 2 33332 234555555677899888 4453 33442 11 123567777
Q ss_pred Eec-CCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 262 LTK-NDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 262 ~~~-~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.++ +. ++++=....+|+.++++..
T Consensus 452 d~~~g~---------lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 452 DDVKEM---------FYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp ETTTTE---------EEEEETTTTEEEEEEECCC
T ss_pred ECCCCE---------EEEEeCCCCEEEEEECCCC
Confidence 775 43 5555566678888888754
No 293
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.23 E-value=0.00032 Score=64.87 Aligned_cols=187 Identities=10% Similarity=0.017 Sum_probs=106.8
Q ss_pred CeEEEEec---CceEEEee-CC----CeEEEEEcCCC-eeeeE-eccCCCCCeEEEEEeCCCCCCCCceEEEeeCC----
Q 019326 44 PITTVAVS---GTAAASGG-TD----DTIHLYDLSTS-SSLGA-IHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD---- 109 (343)
Q Consensus 44 ~v~~l~~~---~~~l~s~~-~d----g~i~iwd~~~~-~~~~~-~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d---- 109 (343)
.+...+|+ |++||.+. .+ ..|+++|+.++ +.+.. +. .....+.|+|++ +.|+....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~----~~~~~~~WspDg-----~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS----GTNGEIVWGPDH-----TSLFYVTKDETLR 245 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE----EECSCCEECSST-----TEEEEEEECTTCC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc----CceeeEEEecCC-----CEEEEEEECCCCC
Confidence 56677776 55666432 22 35999999988 63321 11 123468899998 566666654
Q ss_pred -CeEEEEECCCccee--eeee-eccccEEEEEEecCCCEEEEEeC---CCeEEEEEccCCc-ee--EEEE--cCCcceEE
Q 019326 110 -GFVSIFDADPFVLL--TSVK-VHKKGVNDLAVHHSGKLALTVGR---DDCLAMVNLVRGR-RS--FYHK--IGKEASLI 177 (343)
Q Consensus 110 -g~i~iwd~~~~~~~--~~~~-~~~~~v~~i~~~~~~~~l~~~~~---d~~i~~wd~~~~~-~~--~~~~--~~~~~~~~ 177 (343)
..|+++++.+++.. ..+. ........+.|+|++++|+..+. ...|.++|+.++. .. .... .......+
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~ 325 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV 325 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEE
Confidence 36888888775422 2222 22234667899999998887653 3468888988752 11 1111 12233334
Q ss_pred EEeCCCCEEEEE-eC--C--cEEEEEcccc-eeEE-EecCC--cceEEeeecCCCeEEEEeCCCc--EEEEEC
Q 019326 178 KFDGSGEKFFMV-TE--E--KVGIHQAEDA-KLLC-ELDGK--KRILCAAPGENGVLFTGGEDRS--ITAWDT 239 (343)
Q Consensus 178 ~~~~~~~~~~~~-~~--~--~i~~~d~~~~-~~~~-~~~~~--~~i~~~~~~~~~~l~~~~~dg~--i~i~d~ 239 (343)
.|+..+.+++.. .+ + .|..+++.+. .... .+.+. ..+..+.+..+.++++...++. |.++|+
T Consensus 326 ~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 326 QMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred eeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 444433344444 32 2 4666676542 2222 33333 2456667655556677777776 555665
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.23 E-value=0.0027 Score=57.17 Aligned_cols=219 Identities=14% Similarity=0.030 Sum_probs=138.5
Q ss_pred CCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEe
Q 019326 60 TDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVH 139 (343)
Q Consensus 60 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~ 139 (343)
....|+..++++......+....-..+..|+|.+... ..+++-..++.|..++++.......+.........+++.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~----~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD 88 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDN----RIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVD 88 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTT----EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEE
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCC----EEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEE
Confidence 4567999999876543333221135688999998762 455566668899999987654333333222456789998
Q ss_pred cCCC-EEEEEeCCCeEEEEEccCCceeEEE-EcCCcceEEEEeCCCCEEEEEe---CCcEEEEEcccceeEEEecCCcce
Q 019326 140 HSGK-LALTVGRDDCLAMVNLVRGRRSFYH-KIGKEASLIKFDGSGEKFFMVT---EEKVGIHQAEDAKLLCELDGKKRI 214 (343)
Q Consensus 140 ~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~i 214 (343)
+.+. +.++-...+.|.+.++......... ..-..+..++++|....++.+. .+.|...++...........-...
T Consensus 89 ~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P 168 (628)
T 4a0p_A 89 WLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRA 168 (628)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSE
T ss_pred eCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCc
Confidence 7654 4455556788999998765433322 2235678899999766666662 467777777655443334444567
Q ss_pred EEeeecC-CCeE-EEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 215 LCAAPGE-NGVL-FTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 215 ~~~~~~~-~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
..++++. ++.| ++-...+.|..+|+..... ..+. .......+|++..+ . ++++-...+.|...|..
T Consensus 169 ~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~-~~l~~P~glav~~~-~---------ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIA-DDLPHPFGLTQYQD-Y---------IYWTDWSRRSIERANKT 236 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEE-ECCSCEEEEEEETT-E---------EEEEETTTTEEEEEETT
T ss_pred ceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEee-ccCCCceEEEEECC-E---------EEEecCCCCEEEEEECC
Confidence 7888873 4544 4445678899999875433 3333 33345567877653 2 55565567888888866
Q ss_pred Cc
Q 019326 293 MA 294 (343)
Q Consensus 293 ~~ 294 (343)
++
T Consensus 237 tg 238 (628)
T 4a0p_A 237 SG 238 (628)
T ss_dssp TC
T ss_pred CC
Confidence 55
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.23 E-value=0.0013 Score=53.38 Aligned_cols=200 Identities=13% Similarity=0.019 Sum_probs=125.0
Q ss_pred ecCCCCCeEEEEec--CceEEEee-CCCeEEEEEcCCCeeeeE-ecc----C-CCCCeEEEEE---eCCCCCCCCceEEE
Q 019326 38 YPAHLSPITTVAVS--GTAAASGG-TDDTIHLYDLSTSSSLGA-IHH----H-ESSSVTSLAF---YTPQNLSVPRNLFS 105 (343)
Q Consensus 38 ~~~h~~~v~~l~~~--~~~l~s~~-~dg~i~iwd~~~~~~~~~-~~~----~-~~~~v~~l~~---~~~~~~~~~~~l~s 105 (343)
++.....-.+++|+ ...|+.++ ..+.|..|+...+..... +.. . ....+..|.| .|.+ +++++
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g-----rL~vv 82 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK-----RLFAV 82 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC-----EEEEE
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC-----cEEEE
Confidence 34445556678897 45555555 789999999986543322 222 1 0114678999 5776 56664
Q ss_pred eeC-------------CCeEEEEECC---Ccceeeeeeec-------------cccEEEEEEecCCCEEEEEeCC-CeEE
Q 019326 106 TSA-------------DGFVSIFDAD---PFVLLTSVKVH-------------KKGVNDLAVHHSGKLALTVGRD-DCLA 155 (343)
Q Consensus 106 ~~~-------------dg~i~iwd~~---~~~~~~~~~~~-------------~~~v~~i~~~~~~~~l~~~~~d-~~i~ 155 (343)
... +..|..||+. +++.+...... ......++..++|+..++++.. +.|.
T Consensus 83 ~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~ 162 (334)
T 2p9w_A 83 MKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIA 162 (334)
T ss_dssp EEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEE
T ss_pred EcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEE
Confidence 432 6789999998 77776655421 1258899999999999999888 8887
Q ss_pred EEEccCCceeEEEEcC------CcceEEEEeCCCCEEEEE-eCCcEEEEEccccee--EEEe--c---CCcceEEe-ee-
Q 019326 156 MVNLVRGRRSFYHKIG------KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKL--LCEL--D---GKKRILCA-AP- 219 (343)
Q Consensus 156 ~wd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~--~~~~--~---~~~~i~~~-~~- 219 (343)
..+............. ...+.++++|++..|++. ..+.+..+|+..... +..- . .-.....+ ..
T Consensus 163 rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~ 242 (334)
T 2p9w_A 163 RVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVP 242 (334)
T ss_dssp EECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEE
T ss_pred EEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccc
Confidence 7776544322111111 125689999999999999 889999999875332 2111 0 01112222 22
Q ss_pred cCCCe-EEEEeCCCcEEEEECCCC
Q 019326 220 GENGV-LFTGGEDRSITAWDTNSG 242 (343)
Q Consensus 220 ~~~~~-l~~~~~dg~i~i~d~~~~ 242 (343)
.+++. +++....+.+.+.+....
T Consensus 243 ~~G~vllV~~~~~~~~~l~S~DgW 266 (334)
T 2p9w_A 243 VGNESVLVGARAPYAISFRSWDNW 266 (334)
T ss_dssp ETTEEEEEEEETTEEEEEECSSTT
T ss_pred cCCEEEEEEcCCCCEEEEECCCCc
Confidence 25665 555555666666665443
No 296
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.0021 Score=55.10 Aligned_cols=113 Identities=11% Similarity=0.052 Sum_probs=69.4
Q ss_pred CCCCeEEEEec--CceEEEeeCC-C----eEEEEEcCCCeee--eEeccCCCCCeEEEEEeC-CCCCCCCceEEEeeCCC
Q 019326 41 HLSPITTVAVS--GTAAASGGTD-D----TIHLYDLSTSSSL--GAIHHHESSSVTSLAFYT-PQNLSVPRNLFSTSADG 110 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~d-g----~i~iwd~~~~~~~--~~~~~~~~~~v~~l~~~~-~~~~~~~~~l~s~~~dg 110 (343)
.......|+|+ ++.|+.+... + .+...+. .+... ..+.. ......+++.| ++ .++++-..++
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~--~~~p~giavdp~~g-----~lyv~d~~~~ 248 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK--GQNCNGAETHPING-----ELYFNSWNAG 248 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE--CSSCCCEEECTTTC-----CEEEEETTTT
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc--CCCceEEEEeCCCC-----EEEEEECCCC
Confidence 34567889998 6756665542 1 2333443 33222 22322 24456788999 55 4555655678
Q ss_pred eEEEEECCCcceeeeeee-ccccEEEEEEecCCCE-EEEEeCCCeEEEEEccC
Q 019326 111 FVSIFDADPFVLLTSVKV-HKKGVNDLAVHHSGKL-ALTVGRDDCLAMVNLVR 161 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~-~~~~v~~i~~~~~~~~-l~~~~~d~~i~~wd~~~ 161 (343)
.|..++..++........ .......++|+|++++ +++-...+.|..++...
T Consensus 249 ~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 249 QVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 999999987554222221 1234678999999995 45555678899988763
No 297
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.13 E-value=0.0011 Score=56.92 Aligned_cols=156 Identities=12% Similarity=0.156 Sum_probs=87.4
Q ss_pred CCCCeEEEEec--CceEEEeeCCC-----eEEEEEcCCCee-eeEeccCCCCCeEEEEEeC-CCCCCCCceEEEeeCCCe
Q 019326 41 HLSPITTVAVS--GTAAASGGTDD-----TIHLYDLSTSSS-LGAIHHHESSSVTSLAFYT-PQNLSVPRNLFSTSADGF 111 (343)
Q Consensus 41 h~~~v~~l~~~--~~~l~s~~~dg-----~i~iwd~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~~~~~~~l~s~~~dg~ 111 (343)
.......++++ ++ |+.+...+ .+...+...+.. ...+. . -.....+++.| ++ .++++-..++.
T Consensus 180 ~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~-~~~P~giavd~~~G-----~lyv~d~~~~~ 251 (433)
T 4hw6_A 180 NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-N-ARGAKTCAVHPQNG-----KIYYTRYHHAM 251 (433)
T ss_dssp CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-E-CSSBCCCEECTTTC-----CEEECBTTCSE
T ss_pred CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-c-cCCCCEEEEeCCCC-----eEEEEECCCCE
Confidence 44568889998 66 55444321 133333322211 01121 2 24456788888 55 45555556788
Q ss_pred EEEEECCCcceeeeeeec--cccEEEEEEecCCCEEE-EEeCCCeEEEEEccC--Cce---eEEEEc-------------
Q 019326 112 VSIFDADPFVLLTSVKVH--KKGVNDLAVHHSGKLAL-TVGRDDCLAMVNLVR--GRR---SFYHKI------------- 170 (343)
Q Consensus 112 i~iwd~~~~~~~~~~~~~--~~~v~~i~~~~~~~~l~-~~~~d~~i~~wd~~~--~~~---~~~~~~------------- 170 (343)
|+.+|..++.....+... ...-..++|+|+++.|+ +-...+.|..+++.. +.. ......
T Consensus 252 V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~ 331 (433)
T 4hw6_A 252 ISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTG 331 (433)
T ss_dssp EEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGG
T ss_pred EEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccc
Confidence 999999876653333211 12234699999998554 445578899988652 221 111111
Q ss_pred --CCcceEEEE---------eCCCCEEEEE-eCCcEEEEEcccceeE
Q 019326 171 --GKEASLIKF---------DGSGEKFFMV-TEEKVGIHQAEDAKLL 205 (343)
Q Consensus 171 --~~~~~~~~~---------~~~~~~~~~~-~~~~i~~~d~~~~~~~ 205 (343)
-..+..+++ .+++.++++- ..+.|+.++. ++...
T Consensus 332 a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~ 377 (433)
T 4hw6_A 332 ARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT 377 (433)
T ss_dssp SBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE
T ss_pred eEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE
Confidence 023556888 6666655555 6778888885 45433
No 298
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.12 E-value=0.0076 Score=58.18 Aligned_cols=192 Identities=11% Similarity=0.091 Sum_probs=121.7
Q ss_pred eEEEEECCCcceeeeeeecc-ccEEEEE---EecC-CCEEEEEe----------CCCeEEEEEccCCce--eEEEEcCCc
Q 019326 111 FVSIFDADPFVLLTSVKVHK-KGVNDLA---VHHS-GKLALTVG----------RDDCLAMVNLVRGRR--SFYHKIGKE 173 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~~~-~~v~~i~---~~~~-~~~l~~~~----------~d~~i~~wd~~~~~~--~~~~~~~~~ 173 (343)
.|++.|..+++.+..+.... ..+.+++ |..+ ..++++|. ..|.|.+|++..++. +.....++.
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 47778877777766665332 3445554 3322 36788776 358899999975432 334445677
Q ss_pred ceEEEEeCCCCEEEEEeCCcEEEEEcccceeEE-EecCCcceE--EeeecCCCeEEEEeCCCcEEEEE--CCCCceeEEe
Q 019326 174 ASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLLC-ELDGKKRIL--CAAPGENGVLFTGGEDRSITAWD--TNSGKVAYCI 248 (343)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~i~--~~~~~~~~~l~~~~~dg~i~i~d--~~~~~~~~~~ 248 (343)
+.+++--. .+++++....+++|++...+.++ .......+. .+.. .+++++.|+.-..|.++. ...++....-
T Consensus 888 v~al~~~~--g~Lla~ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~-~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a 964 (1158)
T 3ei3_A 888 VYSMVEFN--GKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKT-KGDFILVGDLMRSVLLLAYKPMEGNFEEIA 964 (1158)
T ss_dssp EEEEEEET--TEEEEEETTEEEEEEECTTSCEEEEEEECCCSCEEEEEE-ETTEEEEEESSBCEEEEEEETTTTEEEEEE
T ss_pred CEEEeeeC--CEEEEEcCCEEEEEECCCCceEEEEeeccccEEEEEEec-cCCEEEEEEhhheEEEEEEEcCCCeEEEEE
Confidence 77766442 37888888999999998765444 111111122 3333 467888888877777654 4444433333
Q ss_pred cccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc-----cCCCcccccccccceeEEE
Q 019326 249 EDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK-----EKPLPLAEAKTNSRLTCLA 315 (343)
Q Consensus 249 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-----~~~~~~~~~~~~~~i~~~~ 315 (343)
.+.+...++++.+..++ .++.+..+|+|.+........ .+......++.+..|+++.
T Consensus 965 ~D~~~~~vta~~~ld~~----------t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~ 1026 (1158)
T 3ei3_A 965 RDFNPNWMSAVEILDDD----------NFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFC 1026 (1158)
T ss_dssp ECCSCBCEEEEEEEETT----------EEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEE
T ss_pred eecccccEEEEEEEccC----------cEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEE
Confidence 33567788999888765 788899999999998765311 1222345677788888875
No 299
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.12 E-value=0.0058 Score=56.64 Aligned_cols=228 Identities=9% Similarity=0.076 Sum_probs=135.0
Q ss_pred CCCeEEEEec-CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc
Q 019326 42 LSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF 120 (343)
Q Consensus 42 ~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 120 (343)
...|++|.-+ ..+|..|..+| +..||-.+-+............|.++....++ .|..|+.+| +..||..+.
T Consensus 21 ~n~V~~I~qD~~G~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g------~lWigT~~G-l~~yd~~~~ 92 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT------YLYMGTDNG-ILVYNYRAD 92 (758)
T ss_dssp CCCEEEEEECTTSCEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT------EEEEEETTE-EEEEETTTT
T ss_pred cceEEEEEECCCCCEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC------cEEEEeCCC-eEEEeCCCC
Confidence 5679999988 67888888888 66677433221111111113568888877766 777887765 788998765
Q ss_pred ceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEE----c-CCcceEEEEeCCCCEEEEEeCCcEE
Q 019326 121 VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHK----I-GKEASLIKFDGSGEKFFMVTEEKVG 195 (343)
Q Consensus 121 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~i~ 195 (343)
+...........|.++.. .++ .|..++.+ .+..+|..+++...... . ...+.++....++...+.. .+.+.
T Consensus 93 ~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~Gl~ 168 (758)
T 3ott_A 93 RYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGT-YNGLC 168 (758)
T ss_dssp EECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEE-TTEEE
T ss_pred EEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEe-CCCHh
Confidence 432211112235776654 344 56666665 68889987665432211 1 2346677777777766644 45677
Q ss_pred EEEcccceeEEEe-cC-----CcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCC
Q 019326 196 IHQAEDAKLLCEL-DG-----KKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGG 268 (343)
Q Consensus 196 ~~d~~~~~~~~~~-~~-----~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 268 (343)
.++..+.+..... .. ...|.++.... ++.|..|+. +-+..+|..+++.. .+.......|.++....++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~-~~~~l~~~~i~~i~~d~~g~-- 244 (758)
T 3ott_A 169 RYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIK-QTEAFHNNSIKSLALDGNGD-- 244 (758)
T ss_dssp EEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEE-EEEEEEEEEEEEEEECTTCC--
T ss_pred hCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEE-eccCCCCCeEEEEEEcCCCC--
Confidence 8887765533211 11 12377777753 456666764 45888998766432 22212344677777665553
Q ss_pred CCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 269 STAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 269 ~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
|..|+.+ -+.+++..+.
T Consensus 245 --------lWigT~~-Gl~~~~~~~~ 261 (758)
T 3ott_A 245 --------LLAGTDN-GLYVYHNDTT 261 (758)
T ss_dssp --------EEEEETT-EEEEECCTTS
T ss_pred --------EEEEeCC-ceeEEecCCC
Confidence 4455544 4778887654
No 300
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.08 E-value=0.0067 Score=56.19 Aligned_cols=256 Identities=10% Similarity=0.082 Sum_probs=144.3
Q ss_pred CCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEec----cCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECC
Q 019326 43 SPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIH----HHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDAD 118 (343)
Q Consensus 43 ~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 118 (343)
..|.++......|..++.+ -+..+|..+++.. .+. ......|.++...+++ .|..|+.+ -+..++..
T Consensus 103 ~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g------~lWigt~~-Gl~~~~~~ 173 (758)
T 3ott_A 103 TDVRTMALQGDTLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDN------QIYVGTYN-GLCRYIPS 173 (758)
T ss_dssp SCEEEEEEETTEEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTC------CEEEEETT-EEEEEETT
T ss_pred ceEEEEEecCCcEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCC------CEEEEeCC-CHhhCccC
Confidence 3577776555567777766 5888898766543 221 1113568888887776 56666655 47788876
Q ss_pred Ccceeeeeeec------cccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc-CCcceEEEEeCCCCEEEEEeC
Q 019326 119 PFVLLTSVKVH------KKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI-GKEASLIKFDGSGEKFFMVTE 191 (343)
Q Consensus 119 ~~~~~~~~~~~------~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 191 (343)
+.+.. .+... ...|.++...+++..|..++. +.+..+|..+++....... ...+.++....++...+.. +
T Consensus 174 ~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~ 250 (758)
T 3ott_A 174 NGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT-D 250 (758)
T ss_dssp TTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE-T
T ss_pred CCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe-C
Confidence 65432 22111 224888888877776666664 5688899877654322222 2346777777777776655 5
Q ss_pred CcEEEEEcccceeEEEec--------CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEec------ccccccEE
Q 019326 192 EKVGIHQAEDAKLLCELD--------GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE------DAHSARVK 257 (343)
Q Consensus 192 ~~i~~~d~~~~~~~~~~~--------~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------~~h~~~v~ 257 (343)
+.+.+++..+.+...... ....|.++.....+.|..|+..| +.++.... ....+. ......|.
T Consensus 251 ~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~~~--~~~~~~~~~~~~~~~~~~v~ 327 (758)
T 3ott_A 251 NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLSRYNS--ALQFIPISQITGTGDGNQFY 327 (758)
T ss_dssp TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEEECCCC---CEEEEHHHHSCSCCCCBEE
T ss_pred CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-ccccccCC--ceeEEecccCCCCCCCceEE
Confidence 568888877654332211 12358888876666788888777 55553322 222221 01134577
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCccc-----ccccccceeEEEcCCCCceec
Q 019326 258 GIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLA-----EAKTNSRLTCLAGSSTKSFKR 324 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-----~~~~~~~i~~~~~s~~~~~~~ 324 (343)
++....++. |..|+.+| +..++..++......... .......|.++.-..++.+-+
T Consensus 328 ~i~~D~~g~----------lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi 388 (758)
T 3ott_A 328 SLFRDSKGF----------YWFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI 388 (758)
T ss_dssp EEEECTTCC----------EEEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE
T ss_pred EEEEcCCCC----------EEEeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEE
Confidence 776655553 55555555 556665542111100000 001123477777766665443
No 301
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.08 E-value=0.0016 Score=52.91 Aligned_cols=185 Identities=11% Similarity=0.109 Sum_probs=98.3
Q ss_pred EEEecCceEEEeeCC-----CeEEEEEcCCCe---e--eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC-----Ce
Q 019326 47 TVAVSGTAAASGGTD-----DTIHLYDLSTSS---S--LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD-----GF 111 (343)
Q Consensus 47 ~l~~~~~~l~s~~~d-----g~i~iwd~~~~~---~--~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d-----g~ 111 (343)
++...+..++.|+.+ ..+.+||..+.+ - +..+... ...- ++... ++ +.++.|+.+ ..
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~-r~~~-~~~~~-~~-----~lyv~GG~~~~~~~~~ 129 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR-RGLA-GATTL-GD-----MIYVSGGFDGSRRHTS 129 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC-CBSC-EEEEE-TT-----EEEEECCBCSSCBCCE
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC-ccce-eEEEE-CC-----EEEEEcccCCCcccce
Confidence 344457777777765 458899988765 2 2222222 1222 22222 44 577777654 36
Q ss_pred EEEEECCCcc--eeeeeeeccccEEEEEEecCCCEEEEEeCC-----CeEEEEEccCCceeEEEEcCCc--ceEEEEeCC
Q 019326 112 VSIFDADPFV--LLTSVKVHKKGVNDLAVHHSGKLALTVGRD-----DCLAMVNLVRGRRSFYHKIGKE--ASLIKFDGS 182 (343)
Q Consensus 112 i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~ 182 (343)
+.+||+.+.+ .+..+.........+. .+++.++.|+.+ ..+..||+.+.+-......+.+ -..+... +
T Consensus 130 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~ 206 (301)
T 2vpj_A 130 MERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-N 206 (301)
T ss_dssp EEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-T
T ss_pred EEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-C
Confidence 8889987644 2222221111112222 256677777654 4588999888765443333322 1222222 4
Q ss_pred CCEEEEE-e-----CCcEEEEEcccceeEEEec--CC-cceEEeeecCCCeEEEEeCC-----CcEEEEECCCCc
Q 019326 183 GEKFFMV-T-----EEKVGIHQAEDAKLLCELD--GK-KRILCAAPGENGVLFTGGED-----RSITAWDTNSGK 243 (343)
Q Consensus 183 ~~~~~~~-~-----~~~i~~~d~~~~~~~~~~~--~~-~~i~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 243 (343)
+..++.+ . ...+.+||+.+.+-...-. .. ....++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 207 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 207 DHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL-RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE-CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 5555555 3 2568899998765433222 11 12222223 66677777655 357888887654
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.05 E-value=3.1e-05 Score=70.78 Aligned_cols=217 Identities=12% Similarity=0.073 Sum_probs=126.5
Q ss_pred CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEe-eCCCeEEEEECCC----cceeeeeeeccccEEE
Q 019326 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFST-SADGFVSIFDADP----FVLLTSVKVHKKGVND 135 (343)
Q Consensus 61 dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~-~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~ 135 (343)
.+.|+..++.+.+....+... ..+..|+|.+.. ..|+.+ ...+.|+.+++.+ ......+.........
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~--~~p~gla~d~~~-----~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~g 457 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNL--RNVVALDTEVAS-----NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 457 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCC--TTCCCCEEETTT-----TEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCC
T ss_pred ccceEEEeCCCCcceeeeccC--cceEEEcccccc-----CeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcce
Confidence 356888888776554444333 456789999866 345444 4567899999875 2222222211223456
Q ss_pred EEEecCC-CEEEEEeCCCeEEEEEccCCceeEEEEc-CCcceEEEEeCCCCEEEEE--eC-CcEEEEEcccceeEEEec-
Q 019326 136 LAVHHSG-KLALTVGRDDCLAMVNLVRGRRSFYHKI-GKEASLIKFDGSGEKFFMV--TE-EKVGIHQAEDAKLLCELD- 209 (343)
Q Consensus 136 i~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~-~~i~~~d~~~~~~~~~~~- 209 (343)
|++.+.+ +++++-...+.|.++++........... ...+..++++|.+..|+.+ .. +.|..+++........+.
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~ 537 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 537 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC
Confidence 8888544 4555555678899999876554333322 2456788999976666655 22 677777765432221111
Q ss_pred CCcceEEeeec-CC-CeEEEEeCCCcEEEEECCCCceeEEecc--cccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCc
Q 019326 210 GKKRILCAAPG-EN-GVLFTGGEDRSITAWDTNSGKVAYCIED--AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGV 285 (343)
Q Consensus 210 ~~~~i~~~~~~-~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~ 285 (343)
.-.....++++ .+ .++++-+..+.|..+++.... ...+.. .......+|++..+. ++++....+.
T Consensus 538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~~~----------lywtd~~~~~ 606 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFEDK----------VFWTDIINEA 606 (699)
T ss_dssp SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEETTE----------EEEECSTTTC
T ss_pred CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEECCE----------EEEEeCCCCe
Confidence 22345567776 33 455555567889999986433 333321 112234455664432 6667777789
Q ss_pred EEEEeccCcc
Q 019326 286 ICVWDVRMAI 295 (343)
Q Consensus 286 i~vwd~~~~~ 295 (343)
|..++..++.
T Consensus 607 V~~~d~~~G~ 616 (699)
T 1n7d_A 607 IFSANRLTGS 616 (699)
T ss_dssp EEEEETTTEE
T ss_pred EEEEEccCCC
Confidence 9999987664
No 303
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.01 E-value=0.0033 Score=51.10 Aligned_cols=219 Identities=11% Similarity=0.045 Sum_probs=113.9
Q ss_pred eEEecc--CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCC----CeEEEEEcCCCeeee
Q 019326 3 LIAGSY--EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTD----DTIHLYDLSTSSSLG 76 (343)
Q Consensus 3 l~~g~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~d----g~i~iwd~~~~~~~~ 76 (343)
++.|+. ...+.+||.... +...+..+......-.++.+.+..++.|+.+ ..+.+||..+.+-..
T Consensus 15 ~~~GG~~~~~~~~~~d~~~~----------~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 15 IALFGGSQPQSCRYFNPKDY----------SWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp EEEECCSSTTSEEEEETTTT----------EEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEE
T ss_pred EEEeCCCCCceEEEecCCCC----------CEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEE
Confidence 445554 356778887651 1222222222223333444557777777755 678899998875433
Q ss_pred E--eccCCCCCeEEEEEeCCCCCCCCceEEEeeCC------CeEEEEECCCcce--eeeeeeccccEEEEEEecCCCEEE
Q 019326 77 A--IHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD------GFVSIFDADPFVL--LTSVKVHKKGVNDLAVHHSGKLAL 146 (343)
Q Consensus 77 ~--~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~--~~~~~~~~~~v~~i~~~~~~~~l~ 146 (343)
. +... ...- +++.. ++ +.++.|+.+ ..+.+||..+.+- +..+.........+. -+++.++
T Consensus 85 ~~~~p~~-r~~~-~~~~~-~~-----~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv 154 (306)
T 3ii7_A 85 KLGPPTP-RDSL-AACAA-EG-----KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYV 154 (306)
T ss_dssp EECCSSC-CBSC-EEEEE-TT-----EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEE
T ss_pred CCCCCcc-ccce-eEEEE-CC-----EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEE
Confidence 2 2211 1222 22222 44 577777765 4688999876532 222211111112222 2556666
Q ss_pred EEeC---------CCeEEEEEccCCceeEEEEcCCc--ceEEEEeCCCCEEEEE-e-----CCcEEEEEcccceeEEE--
Q 019326 147 TVGR---------DDCLAMVNLVRGRRSFYHKIGKE--ASLIKFDGSGEKFFMV-T-----EEKVGIHQAEDAKLLCE-- 207 (343)
Q Consensus 147 ~~~~---------d~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~-----~~~i~~~d~~~~~~~~~-- 207 (343)
.|+. -..+.+||+.+.+-......+.. -..+... +++.++.+ . -..+.+||+.+.+-...
T Consensus 155 ~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 233 (306)
T 3ii7_A 155 CGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSP 233 (306)
T ss_dssp ECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCC
T ss_pred ECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCC
Confidence 6653 34588999988764443333322 1223322 45555555 2 24688899887653322
Q ss_pred ecCC-cceEEeeecCCCeEEEEeCC-----CcEEEEECCCCc
Q 019326 208 LDGK-KRILCAAPGENGVLFTGGED-----RSITAWDTNSGK 243 (343)
Q Consensus 208 ~~~~-~~i~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 243 (343)
+... ....++.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 234 ~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 234 MPWKGVTVKCAAV-GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp CSCCBSCCEEEEE-TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCCccceeEEEE-CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 2211 12223333 66777777754 468889987654
No 304
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.99 E-value=0.0049 Score=51.29 Aligned_cols=222 Identities=13% Similarity=0.101 Sum_probs=119.7
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcce--eeeee---eccccEEEEEEecC---CCEEEEEeC-C---
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVL--LTSVK---VHKKGVNDLAVHHS---GKLALTVGR-D--- 151 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~---~~~~~v~~i~~~~~---~~~l~~~~~-d--- 151 (343)
.....++|.|++ + ++.+..+|.|++++ .++. +..+. ........|+++|+ +..|+++.. .
T Consensus 31 ~~P~~ia~~pdG-----~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~ 102 (352)
T 2ism_A 31 EVPWALAFLPDG-----G-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGG 102 (352)
T ss_dssp SCEEEEEECTTS-----C-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred CCceEEEEcCCC-----e-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCC
Confidence 457799999998 4 55566779999998 3332 22111 12346789999998 445544433 2
Q ss_pred --CeEEEEEccCCce----eEEEEcC------CcceEEEEeCCCCEEEEEeC--------------CcEEEEEcccc---
Q 019326 152 --DCLAMVNLVRGRR----SFYHKIG------KEASLIKFDGSGEKFFMVTE--------------EKVGIHQAEDA--- 202 (343)
Q Consensus 152 --~~i~~wd~~~~~~----~~~~~~~------~~~~~~~~~~~~~~~~~~~~--------------~~i~~~d~~~~--- 202 (343)
+.|..++...+.. ......+ +....++|.|+|.++++..+ +.|.-++....
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~ 182 (352)
T 2ism_A 103 LRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAP 182 (352)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCT
T ss_pred CccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCC
Confidence 6788888764421 1111122 34567999999976665432 34555544320
Q ss_pred -----------eeEEEecCCcceEEeeecC-CCeEEEEeCC-Cc--------EEEEECCC----------------Ccee
Q 019326 203 -----------KLLCELDGKKRILCAAPGE-NGVLFTGGED-RS--------ITAWDTNS----------------GKVA 245 (343)
Q Consensus 203 -----------~~~~~~~~~~~i~~~~~~~-~~~l~~~~~d-g~--------i~i~d~~~----------------~~~~ 245 (343)
..+... .......+++++ .+.|+++... .. |.+..... ..++
T Consensus 183 ~npf~~~~~~~~~i~a~-G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~ 261 (352)
T 2ism_A 183 GNPFLGRRGARPEVYSL-GHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPL 261 (352)
T ss_dssp TCTTTTCTTSCTTEEEE-CCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred CCcccCCCCCCccEEEE-cCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCe
Confidence 001111 112345567765 4444444322 22 33322111 0123
Q ss_pred EEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc----cCCCcccccccccceeEEEcCCCCc
Q 019326 246 YCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK----EKPLPLAEAKTNSRLTCLAGSSTKS 321 (343)
Q Consensus 246 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~~i~~~~~s~~~~ 321 (343)
..+. +......+++ ..+. ++++.-..+.|...+++.... .....+. ....++..+++.||+.
T Consensus 262 ~~~~--~~~ap~G~~~-~~G~---------l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~--~~~~rp~~v~~~pdG~ 327 (352)
T 2ism_A 262 YFWP--QGFPPGNLAF-FRGD---------LYVAGLRGQALLRLVLEGERGRWRVLRVETAL--SGFGRLREVQVGPDGA 327 (352)
T ss_dssp EECT--TCCCEEEEEE-ETTE---------EEEEETTTTEEEEEEEEEETTEEEEEEEEEEE--ESSCCEEEEEECTTSC
T ss_pred EecC--CCCCCcceEE-ECCE---------EEEEECCCCEEEEEEECCCCcceeecchheec--ccCCCeeEEEECCCCc
Confidence 3332 2334567777 3332 666666677788887765421 0011111 2235789999999998
Q ss_pred eeccccC
Q 019326 322 FKRPQIG 328 (343)
Q Consensus 322 ~~~~~~~ 328 (343)
+.+....
T Consensus 328 lyv~~~~ 334 (352)
T 2ism_A 328 LYVTTSN 334 (352)
T ss_dssp EEEEECS
T ss_pred EEEEEeC
Confidence 8776654
No 305
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.98 E-value=0.00042 Score=56.84 Aligned_cols=190 Identities=12% Similarity=0.105 Sum_probs=109.3
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEe-eCCCeEEEEECCCcceeeeeeec-
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFST-SADGFVSIFDADPFVLLTSVKVH- 129 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~- 129 (343)
++.++.++.||.|.-.|.++|+..+.+......++....- +.. ...+..++.. +.||.|..++..++.....+...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~-~~~-~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQE-PSR-LETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCC-SCT-TTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecC-Ccc-ccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 5688999999999999999999999987541123322110 110 0001233333 68999999999887655444321
Q ss_pred ---cccEEE---EEE-e----cCCCEEEEEeCCCeEEEEEccCCceeEEEEcCCcce--------EEEEe-----CCCCE
Q 019326 130 ---KKGVND---LAV-H----HSGKLALTVGRDDCLAMVNLVRGRRSFYHKIGKEAS--------LIKFD-----GSGEK 185 (343)
Q Consensus 130 ---~~~v~~---i~~-~----~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~--------~~~~~-----~~~~~ 185 (343)
..++.. ... . ..+..+++++.+|.+...|+++|+.+.......+.. |.... ..+..
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~ 167 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENM 167 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCe
Confidence 112221 000 0 135678999999999999999999998887654321 11110 12344
Q ss_pred EEEE-eCCcEEEEEcccceeEEEec-----CC---cceE-Eeeec-CCCeEEEEeCCCcEEEEECCCCceeE
Q 019326 186 FFMV-TEEKVGIHQAEDAKLLCELD-----GK---KRIL-CAAPG-ENGVLFTGGEDRSITAWDTNSGKVAY 246 (343)
Q Consensus 186 ~~~~-~~~~i~~~d~~~~~~~~~~~-----~~---~~i~-~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~ 246 (343)
++.+ .+..+.+.+ ++++ ...+. .. .++. ....+ ++.+ +.++.||.|..+|..+|+.+.
T Consensus 168 v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 168 IVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 5555 566666666 4443 22221 00 0000 00001 2344 567889999999999998876
No 306
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.92 E-value=0.0057 Score=49.66 Aligned_cols=155 Identities=10% Similarity=0.149 Sum_probs=103.2
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEee-CCCeEEEEECCCcceeee-eee----c--cccEEEEEE---ecCCCEEEEEe--
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTS-ADGFVSIFDADPFVLLTS-VKV----H--KKGVNDLAV---HHSGKLALTVG-- 149 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~-~~~----~--~~~v~~i~~---~~~~~~l~~~~-- 149 (343)
...-.+.+|.+.. ..|+.++ ..++|..||...+..... +.. . ...+..|.| .|+++++++..
T Consensus 12 ~~yPE~~~wd~~~-----g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~ 86 (334)
T 2p9w_A 12 NLTPEDTIYDRTR-----QVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNA 86 (334)
T ss_dssp TCCCSCEEEETTT-----TEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEET
T ss_pred ccCCcCccCcCCC-----CEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccc
Confidence 4445578898765 3555555 799999999975543322 221 0 114689999 68877776543
Q ss_pred -----------CCCeEEEEEcc---CCceeEEEEcC--------------CcceEEEEeCCCCEEEEE-eC-CcEEEEEc
Q 019326 150 -----------RDDCLAMVNLV---RGRRSFYHKIG--------------KEASLIKFDGSGEKFFMV-TE-EKVGIHQA 199 (343)
Q Consensus 150 -----------~d~~i~~wd~~---~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~-~~-~~i~~~d~ 199 (343)
.+..|..+|+. +++.+....+. .....++..++|+..++. .. +.|..++.
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 26789999999 88877766643 136779999999999877 66 77777776
Q ss_pred ccceeEEEe-cC-----CcceEEeeec-CCCeEEEEeCCCcEEEEECCCC
Q 019326 200 EDAKLLCEL-DG-----KKRILCAAPG-ENGVLFTGGEDRSITAWDTNSG 242 (343)
Q Consensus 200 ~~~~~~~~~-~~-----~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~ 242 (343)
.......-. .. ....+.+++. +++.|++....|.|..+|+.+.
T Consensus 167 dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 167 DGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp TSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 543222111 11 1225577887 4667777766999999998854
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.91 E-value=0.0046 Score=50.10 Aligned_cols=221 Identities=15% Similarity=0.121 Sum_probs=113.6
Q ss_pred CceEEEee-CC-----CeEEEEEcCCCeeeeE--eccCCCCCeEEEEEeCCCCCCCCceEEEeeCC-----CeEEEEECC
Q 019326 52 GTAAASGG-TD-----DTIHLYDLSTSSSLGA--IHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD-----GFVSIFDAD 118 (343)
Q Consensus 52 ~~~l~s~~-~d-----g~i~iwd~~~~~~~~~--~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~ 118 (343)
+..++.|+ .+ ..+.+||..+.+-... +... ... .++... ++ ..++.|+.+ ..+.+||+.
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~-~~~~~~-~~-----~l~v~GG~~~~~~~~~~~~~d~~ 86 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRK-RRY-VASVSL-HD-----RIYVIGGYDGRSRLSSVECLDYT 86 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSC-CBS-CEEEEE-TT-----EEEEECCBCSSCBCCCEEEEETT
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChh-hcc-ccEEEE-CC-----EEEEEcCCCCCccCceEEEEECC
Confidence 45556666 32 3688999887653321 2211 111 222222 34 577777765 468999987
Q ss_pred Ccc-----eeeeeeeccccEEEEEEecCCCEEEEEeCC-----CeEEEEEccCCceeEEEEcCCc--ceEEEEeCCCCEE
Q 019326 119 PFV-----LLTSVKVHKKGVNDLAVHHSGKLALTVGRD-----DCLAMVNLVRGRRSFYHKIGKE--ASLIKFDGSGEKF 186 (343)
Q Consensus 119 ~~~-----~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 186 (343)
+.+ .+..+.........+.+ +++.++.|+.+ ..+.+||+.+.+-......+.. -..++.. +++.+
T Consensus 87 ~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iy 163 (301)
T 2vpj_A 87 ADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-SGVIY 163 (301)
T ss_dssp CCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE-TTEEE
T ss_pred CCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE-CCEEE
Confidence 644 22222211112222222 56677777643 4688999888765444433322 1222222 55555
Q ss_pred EEE-e-----CCcEEEEEcccceeEEEec--CCcceEEeeecCCCeEEEEeCC-----CcEEEEECCCCceeEEeccc-c
Q 019326 187 FMV-T-----EEKVGIHQAEDAKLLCELD--GKKRILCAAPGENGVLFTGGED-----RSITAWDTNSGKVAYCIEDA-H 252 (343)
Q Consensus 187 ~~~-~-----~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~-h 252 (343)
+.+ . -..+.+||+.+.+-...-. ....-.++...++.+++.|+.+ ..+.+||+.+.+-. .+... .
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p~ 242 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWT-TVTSMTT 242 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEE-EECCCSS
T ss_pred EECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEE-ECCCCCC
Confidence 555 2 2568889988765433322 1111112223366777777764 46899999876422 22201 1
Q ss_pred cccEEEEEEEecCCCCCCCCCCeEEEEEcCC-----CcEEEEeccCc
Q 019326 253 SARVKGIVVLTKNDGGSTAENPYLVASASSD-----GVICVWDVRMA 294 (343)
Q Consensus 253 ~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~ 294 (343)
...-.+++.. ++. +++.|+.+ ..+.+||+++.
T Consensus 243 ~r~~~~~~~~-~~~---------i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 243 PRCYVGATVL-RGR---------LYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp CCBSCEEEEE-TTE---------EEEECCBCSSSBEEEEEEEETTTT
T ss_pred cccceeEEEE-CCE---------EEEEcCcCCCcccccEEEEcCCCC
Confidence 1111122222 333 67777765 35778888765
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.85 E-value=0.0075 Score=48.87 Aligned_cols=185 Identities=15% Similarity=0.154 Sum_probs=96.1
Q ss_pred EEecCceEEEeeCC-----CeEEEEEcCCCeeeeE--eccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC-----eEEEE
Q 019326 48 VAVSGTAAASGGTD-----DTIHLYDLSTSSSLGA--IHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG-----FVSIF 115 (343)
Q Consensus 48 l~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~--~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg-----~i~iw 115 (343)
+.+.+..++.|+.+ ..+.+||..+.+-... +... ... .+++.. ++ ..++.|+.++ .+.+|
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~-~~~~~~-~~-----~iyv~GG~~~~~~~~~~~~~ 129 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR-RST-LGAAVL-NG-----LLYAVGGFDGSTGLSSVEAY 129 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC-CBS-CEEEEE-TT-----EEEEEEEECSSCEEEEEEEE
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc-ccc-eEEEEE-CC-----EEEEEcCCCCCccCceEEEE
Confidence 34457777777754 3588899887653322 2211 112 222222 34 5777777653 57788
Q ss_pred ECCCcc--eeeeeeeccccEEEEEEecCCCEEEEEeCC-------CeEEEEEccCCceeEEEEcCCc--ceEEEEeCCCC
Q 019326 116 DADPFV--LLTSVKVHKKGVNDLAVHHSGKLALTVGRD-------DCLAMVNLVRGRRSFYHKIGKE--ASLIKFDGSGE 184 (343)
Q Consensus 116 d~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d-------~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~~~ 184 (343)
|+.+.+ .+..+.........+. -+++.++.|+.+ ..+..||+.+.+-......+.. -..+... ++.
T Consensus 130 d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~ 206 (302)
T 2xn4_A 130 NIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNL 206 (302)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE
T ss_pred eCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCE
Confidence 886643 2222221111112222 255666666542 4588999988764443333221 1222222 455
Q ss_pred EEEEE-e-----CCcEEEEEcccceeEEEec--CCcceEEeeecCCCeEEEEeCCC-----cEEEEECCCCc
Q 019326 185 KFFMV-T-----EEKVGIHQAEDAKLLCELD--GKKRILCAAPGENGVLFTGGEDR-----SITAWDTNSGK 243 (343)
Q Consensus 185 ~~~~~-~-----~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~ 243 (343)
.++.+ . ...+.+||+.+.+-...-. ....-.+++..++.+++.|+.++ .+.+||+.+.+
T Consensus 207 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 207 LYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 55555 3 2468899988765433222 11111122233667777777553 48889988654
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.84 E-value=0.0075 Score=48.96 Aligned_cols=218 Identities=7% Similarity=0.024 Sum_probs=111.9
Q ss_pred eEEEeeC--CCeEEEEEcCCCeeee--EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC----CeEEEEECCCcce--e
Q 019326 54 AAASGGT--DDTIHLYDLSTSSSLG--AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD----GFVSIFDADPFVL--L 123 (343)
Q Consensus 54 ~l~s~~~--dg~i~iwd~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~--~ 123 (343)
+++.|+. ...+.+||..+++-.. .+... ...- ++... ++ ..++.|+.+ ..+.+||..+.+- +
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~-~~~~~-~~-----~lyv~GG~~~~~~~~~~~~d~~~~~W~~~ 85 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEK-RRDA-ACVFW-DN-----VVYILGGSQLFPIKRMDCYNVVKDSWYSK 85 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCC-CBSC-EEEEE-TT-----EEEEECCBSSSBCCEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcc-ccee-EEEEE-CC-----EEEEEeCCCCCCcceEEEEeCCCCeEEEC
Confidence 3444543 3568899988875332 22221 1222 22222 34 577777755 6788999876542 2
Q ss_pred eeeeeccccEEEEEEecCCCEEEEEeCC------CeEEEEEccCCceeEEEEcCCc--ceEEEEeCCCCEEEEE-e----
Q 019326 124 TSVKVHKKGVNDLAVHHSGKLALTVGRD------DCLAMVNLVRGRRSFYHKIGKE--ASLIKFDGSGEKFFMV-T---- 190 (343)
Q Consensus 124 ~~~~~~~~~v~~i~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~---- 190 (343)
..+.........+. -+++.++.|+.+ ..+.+||..+.+-......+.+ -..++. .+++.++.+ .
T Consensus 86 ~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~ 162 (306)
T 3ii7_A 86 LGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNN 162 (306)
T ss_dssp ECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCT
T ss_pred CCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCC
Confidence 22221111112222 256677777755 4588999988764433333221 122222 255555555 2
Q ss_pred -----CCcEEEEEcccceeEEEec--CCcceEEeeecCCCeEEEEeCC-----CcEEEEECCCCce--eEEecccccccE
Q 019326 191 -----EEKVGIHQAEDAKLLCELD--GKKRILCAAPGENGVLFTGGED-----RSITAWDTNSGKV--AYCIEDAHSARV 256 (343)
Q Consensus 191 -----~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~h~~~v 256 (343)
-..+.+||+.+.+-...-. ....-.++...++.+++.|+.+ ..+.+||+.+.+- +..+. ......
T Consensus 163 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~ 241 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMP-WKGVTV 241 (306)
T ss_dssp TTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCS-CCBSCC
T ss_pred CcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCC-CCccce
Confidence 3458889988765433222 1111122222266677777653 4588999887642 21222 111111
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEcCC-----CcEEEEeccCc
Q 019326 257 KGIVVLTKNDGGSTAENPYLVASASSD-----GVICVWDVRMA 294 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~ 294 (343)
+++.. ++. +++.|+.+ ..+.+||+.+.
T Consensus 242 -~~~~~-~~~---------i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 242 -KCAAV-GSI---------VYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp -EEEEE-TTE---------EEEEECBCSSSBCCEEEEEETTTT
T ss_pred -eEEEE-CCE---------EEEEeCcCCCeeeeeEEEEcCCCC
Confidence 22222 332 77777754 46888898875
No 310
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.73 E-value=0.014 Score=48.52 Aligned_cols=216 Identities=11% Similarity=0.031 Sum_probs=111.5
Q ss_pred CCCeEEEEec-CceEEEeeCCCeEEEEEcCCCee--eeEec---cCCCCCeEEEEEeCC---CCCCCCceEEEeeC-C--
Q 019326 42 LSPITTVAVS-GTAAASGGTDDTIHLYDLSTSSS--LGAIH---HHESSSVTSLAFYTP---QNLSVPRNLFSTSA-D-- 109 (343)
Q Consensus 42 ~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~--~~~~~---~~~~~~v~~l~~~~~---~~~~~~~~l~s~~~-d-- 109 (343)
-.....|+|. ...|+.+..+|.|++++ +++. +..+. .. ......|+++|+ + ..|+.+.. .
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g-~~~p~gia~~pdf~~~-----g~lYv~~~~~~~ 101 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRG-ESGLLGLALHPRFPQE-----PYVYAYRTVAEG 101 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCST-TCSEEEEEECTTTTTS-----CEEEEEEEECTT
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecC-CCCceeEEECCCCCCC-----CEEEEEEecCCC
Confidence 3456789998 33466667779999998 3432 22121 12 457899999998 3 24444333 2
Q ss_pred ---CeEEEEECCCcc-----ee-eeeee---ccccEEEEEEecCCCEEEEEeC-------------CCeEEEEEccCC--
Q 019326 110 ---GFVSIFDADPFV-----LL-TSVKV---HKKGVNDLAVHHSGKLALTVGR-------------DDCLAMVNLVRG-- 162 (343)
Q Consensus 110 ---g~i~iwd~~~~~-----~~-~~~~~---~~~~v~~i~~~~~~~~l~~~~~-------------d~~i~~wd~~~~-- 162 (343)
+.|..++..... .+ ..+.. .......++|.|+|.+.++.+. .|.|.-++....
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p 181 (352)
T 2ism_A 102 GLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPA 181 (352)
T ss_dssp SSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBC
T ss_pred CCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCC
Confidence 678888876431 11 11221 0113368999999976666542 145665655420
Q ss_pred ----------ceeEEEEcC-CcceEEEEeC-CCCEEEEE-eCCcE------EEEEcccce------------------eE
Q 019326 163 ----------RRSFYHKIG-KEASLIKFDG-SGEKFFMV-TEEKV------GIHQAEDAK------------------LL 205 (343)
Q Consensus 163 ----------~~~~~~~~~-~~~~~~~~~~-~~~~~~~~-~~~~i------~~~d~~~~~------------------~~ 205 (343)
......... ..+..++|+| ++..+++- ..+.+ .+.-+..+. +.
T Consensus 182 ~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~ 261 (352)
T 2ism_A 182 PGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPL 261 (352)
T ss_dssp TTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred CCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCe
Confidence 011111222 3356689999 55544444 22321 122222221 12
Q ss_pred EEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCce------eEEecccccccEEEEEEEecCC
Q 019326 206 CELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKV------AYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 206 ~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
..+.+......+++..+.++++.-..+.|...++..... ...+. .-...+..+++.|++.
T Consensus 262 ~~~~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~v~~~pdG~ 327 (352)
T 2ism_A 262 YFWPQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL-SGFGRLREVQVGPDGA 327 (352)
T ss_dssp EECTTCCCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-ESSCCEEEEEECTTSC
T ss_pred EecCCCCCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheec-ccCCCeeEEEECCCCc
Confidence 222223345566665666666655667777777653321 11221 1224567777766654
No 311
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.72 E-value=0.025 Score=50.94 Aligned_cols=195 Identities=8% Similarity=-0.026 Sum_probs=117.2
Q ss_pred CCeEEEEec--CceE-EEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC
Q 019326 43 SPITTVAVS--GTAA-ASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP 119 (343)
Q Consensus 43 ~~v~~l~~~--~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 119 (343)
..+.+|+|+ ++.| ++-...+.|+.++.+.......+... -.....+++.+.+. +++++-+..+.|.+.+++.
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~-~~~p~GlAvD~~~~----~lY~tD~~~~~I~v~~~~G 423 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQ-IAHPDGIAVDWVAR----NLYWTDTGTDRIEVTRLNG 423 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-CSCCCEEEEETTTT----EEEEEETTTTEEEEEETTS
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECC-CCCcCceEEecccC----cEEEEeCCCCcEEEEeCCC
Confidence 457788887 4444 44445788999998754433333333 35677899986541 5666666778999999876
Q ss_pred cceeeeee-eccccEEEEEEecCCCEEEEEeC--CCeEEEEEccCCceeEEEE-cCCcceEEEEeCCCCEEEEE--eCCc
Q 019326 120 FVLLTSVK-VHKKGVNDLAVHHSGKLALTVGR--DDCLAMVNLVRGRRSFYHK-IGKEASLIKFDGSGEKFFMV--TEEK 193 (343)
Q Consensus 120 ~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~~--d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~ 193 (343)
.. ...+. ..-....+|+++|....|+.+.. ...|...++.......... .-..+..+++++.+..|+.+ ..+.
T Consensus 424 ~~-~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~ 502 (619)
T 3s94_A 424 TM-RKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDK 502 (619)
T ss_dssp CS-CEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred Ce-EEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCE
Confidence 43 33332 23346789999997444444432 3677777765433322222 23567889999988888887 5567
Q ss_pred EEEEEcccceeEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCc
Q 019326 194 VGIHQAEDAKLLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGK 243 (343)
Q Consensus 194 i~~~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 243 (343)
|..+++........+. .-.....++...+.++++-...+.|...|..++.
T Consensus 503 I~~~~~dG~~~~~~~~~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g~ 553 (619)
T 3s94_A 503 IEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAE 553 (619)
T ss_dssp EEEEESSSCCCEEEEECCCCSSCCEEEETTEEEEECTTSSCEEEEESSSCC
T ss_pred EEEEecCCCceEEEeccCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCCc
Confidence 8888875443222211 1112223444344444444456667777777663
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.70 E-value=0.013 Score=47.34 Aligned_cols=221 Identities=12% Similarity=0.136 Sum_probs=111.1
Q ss_pred ceEEEeeCC----CeEEEEEcCCCeeeeE--eccCCCCCeEEEEEeCCCCCCCCceEEEeeCC-----CeEEEEECCCcc
Q 019326 53 TAAASGGTD----DTIHLYDLSTSSSLGA--IHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD-----GFVSIFDADPFV 121 (343)
Q Consensus 53 ~~l~s~~~d----g~i~iwd~~~~~~~~~--~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~ 121 (343)
.+++.|+.+ ..+..||..+.+-... +... ... .+++.. ++ ..++.|+.+ ..+.+||..+.+
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~-~~~~~~-~~-----~lyv~GG~~~~~~~~~~~~~d~~~~~ 88 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSR-RCR-AGMVYM-AG-----LVFAVGGFNGSLRVRTVDSYDPVKDQ 88 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSC-CBS-CEEEEE-TT-----EEEEESCBCSSSBCCCEEEEETTTTE
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcc-ccc-ceEEEE-CC-----EEEEEeCcCCCccccceEEECCCCCc
Confidence 445555543 3588899887753322 1111 111 122222 44 577777755 358889987643
Q ss_pred --eeeeeeeccccEEEEEEecCCCEEEEEeCCC-----eEEEEEccCCceeEEEEcCCc--ceEEEEeCCCCEEEEE-e-
Q 019326 122 --LLTSVKVHKKGVNDLAVHHSGKLALTVGRDD-----CLAMVNLVRGRRSFYHKIGKE--ASLIKFDGSGEKFFMV-T- 190 (343)
Q Consensus 122 --~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~- 190 (343)
.+..+........... -++..++.|+.++ .+.+||+.+.+-......+.+ -..++.. +++.++.+ .
T Consensus 89 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~ 165 (302)
T 2xn4_A 89 WTSVANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GGLLYAVGGYD 165 (302)
T ss_dssp EEEECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEE
T ss_pred eeeCCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE-CCEEEEEeCCC
Confidence 2222221111112222 2566777777553 577888887764443333322 1222222 45555554 2
Q ss_pred ------CCcEEEEEcccceeEEE--ecCCcceEEeeecCCCeEEEEeCC-----CcEEEEECCCCceeEEeccc-ccccE
Q 019326 191 ------EEKVGIHQAEDAKLLCE--LDGKKRILCAAPGENGVLFTGGED-----RSITAWDTNSGKVAYCIEDA-HSARV 256 (343)
Q Consensus 191 ------~~~i~~~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~-h~~~v 256 (343)
-..+.+||+.+.+-... +.....-.+++..++.+++.|+.+ ..+.+||+.+.+-. .+... ....-
T Consensus 166 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~r~~ 244 (302)
T 2xn4_A 166 VASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWR-QVADMNMCRRN 244 (302)
T ss_dssp TTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEE-EECCCSSCCBS
T ss_pred CCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEe-eCCCCCCcccc
Confidence 23588899887654332 221111122233366777777654 46899999876422 22201 11111
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEcCCC-----cEEEEeccCcc
Q 019326 257 KGIVVLTKNDGGSTAENPYLVASASSDG-----VICVWDVRMAI 295 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~ 295 (343)
.+++.. ++. +++.|+.++ .+.+||+.+..
T Consensus 245 ~~~~~~-~~~---------i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 245 AGVCAV-NGL---------LYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CEEEEE-TTE---------EEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CeEEEE-CCE---------EEEECCcCCCcccccEEEEcCCCCe
Confidence 122222 332 777777653 48889988763
No 313
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.61 E-value=0.021 Score=47.27 Aligned_cols=175 Identities=13% Similarity=0.074 Sum_probs=100.4
Q ss_pred cCCeEEEEEeecCCCCCCCCcceeeEEeEEecC-----CCCCeEEEEec----Cc-eEEEe-eC--CCeEEEEEcCCC--
Q 019326 8 YEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPA-----HLSPITTVAVS----GT-AAASG-GT--DDTIHLYDLSTS-- 72 (343)
Q Consensus 8 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~----~~-~l~s~-~~--dg~i~iwd~~~~-- 72 (343)
.+|.|.++|..... .+ .+.+ .+.+ .......+.+. +. +|+.+ .. +.+|.+|+++..
T Consensus 81 ~~G~I~~~d~~~~~-----~~---~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~ 151 (355)
T 3sre_A 81 KSGKILLMDLNEKE-----PA---VSEL-EIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEK 151 (355)
T ss_dssp -CCEEEEEETTSSS-----CC---EEEC-EEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTT
T ss_pred CCCeEEEEecCCCC-----Cc---eEEE-EccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCC
Confidence 68999999986411 11 1111 1222 23355666652 32 34443 22 567888877653
Q ss_pred --eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee-----------------CCCeEEEEECCCcceeeeeeeccccE
Q 019326 73 --SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS-----------------ADGFVSIFDADPFVLLTSVKVHKKGV 133 (343)
Q Consensus 73 --~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~-----------------~dg~i~iwd~~~~~~~~~~~~~~~~v 133 (343)
..+..+.+..-...+.+.+.+++ .+.++.. ..|.|.-+|. ++ +..+...-...
T Consensus 152 ~~~~~~~~~g~~~~~pND~~v~~~G-----~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~p 223 (355)
T 3sre_A 152 SLLHLKTIRHKLLPSVNDIVAVGPE-----HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFA 223 (355)
T ss_dssp EEEEEEEECCTTCSSEEEEEEEETT-----EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSE
T ss_pred EEEEEeccccCCCCCCceEEEeCCC-----CEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCccc
Confidence 22334444434678899999998 5555543 1245555554 33 23333333467
Q ss_pred EEEEEecCCCEEEEEe-CCCeEEEEEccC-Ccee--EEEEcCCcceEEEEeC-CCCEEEEEe--CCcEEEEEc
Q 019326 134 NDLAVHHSGKLALTVG-RDDCLAMVNLVR-GRRS--FYHKIGKEASLIKFDG-SGEKFFMVT--EEKVGIHQA 199 (343)
Q Consensus 134 ~~i~~~~~~~~l~~~~-~d~~i~~wd~~~-~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~i~~~d~ 199 (343)
+.++|+|+++.|+.+. ..+.|..|++.. +... ..+..+..+-.+++++ +|++.+++. .+.+..|+.
T Consensus 224 NGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 224 NGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred CcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 8999999998776655 578999999864 3321 2234456677789998 588777662 234444443
No 314
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.61 E-value=0.022 Score=47.36 Aligned_cols=233 Identities=11% Similarity=0.053 Sum_probs=125.6
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc-eeeeee---eccccEEEEEEecC---CCEEEEEeC----C
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV-LLTSVK---VHKKGVNDLAVHHS---GKLALTVGR----D 151 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~---~~~~~v~~i~~~~~---~~~l~~~~~----d 151 (343)
-.....|+|.|++ + |+.+..+|.|++++. +++ .+..+. ........|+++|+ +..|+++.. +
T Consensus 28 l~~P~~ia~~pdG-----~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~ 100 (354)
T 3a9g_A 28 LEVPWSIAPLGGG-----R-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEG 100 (354)
T ss_dssp CSCEEEEEEEETT-----E-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGG
T ss_pred CCCCeEEEEcCCC-----e-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCC
Confidence 3567899999998 4 666677799999974 343 222211 12346889999997 445544433 3
Q ss_pred ----CeEEEEEccCC--c----eeEE--EEc--CCcceEEEEeCCCCEEEEEeC--------------CcEEEEEcccc-
Q 019326 152 ----DCLAMVNLVRG--R----RSFY--HKI--GKEASLIKFDGSGEKFFMVTE--------------EKVGIHQAEDA- 202 (343)
Q Consensus 152 ----~~i~~wd~~~~--~----~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~--------------~~i~~~d~~~~- 202 (343)
+.|..|+.... . .... ... .+....+.|.|+|.++++..+ +.|.-++....
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~ 180 (354)
T 3a9g_A 101 GHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRP 180 (354)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCC
T ss_pred CCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCC
Confidence 56777877654 1 1111 111 134567999999986666432 23444443321
Q ss_pred --------eeEEEecCCcceEEeeecC-CCeEEEEeCCC----cEEEEECCC----------------CceeEEeccccc
Q 019326 203 --------KLLCELDGKKRILCAAPGE-NGVLFTGGEDR----SITAWDTNS----------------GKVAYCIEDAHS 253 (343)
Q Consensus 203 --------~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg----~i~i~d~~~----------------~~~~~~~~~~h~ 253 (343)
..+....+ .....+++++ ...|+++.... .|.+..... ..++..+. ...
T Consensus 181 p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~ 258 (354)
T 3a9g_A 181 PADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTG-SET 258 (354)
T ss_dssp CTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-TCC
T ss_pred CCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecC-CCC
Confidence 01111112 2234567765 44455544321 233332110 01333432 123
Q ss_pred ccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCcccc-CCCcccccccccceeEEEcCCCCceecccc
Q 019326 254 ARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKE-KPLPLAEAKTNSRLTCLAGSSTKSFKRPQI 327 (343)
Q Consensus 254 ~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~ 327 (343)
.....+++..... .-..++.++++.-..+.|...++...... ....+.. ....++..+++.||+.+.+...
T Consensus 259 ~ap~G~~~y~g~~--fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~-~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 259 WAPSGASFVHGDM--FPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFK-NVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCEEEEEECCSSS--CGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECT-TTSCCEEEEEECTTSCEEEEEC
T ss_pred cCCcceEEECCCC--CcccCCcEEEEEcCCCEEEEEEECCCCcccceeeecc-CCCCCeeEEEECCCCcEEEEEe
Confidence 4577888864322 11134557777777788888888753211 0111111 1245789999999998776654
No 315
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.60 E-value=0.019 Score=46.36 Aligned_cols=212 Identities=13% Similarity=0.118 Sum_probs=136.3
Q ss_pred CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC-cceeeeeeecc----ccEEE
Q 019326 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP-FVLLTSVKVHK----KGVND 135 (343)
Q Consensus 61 dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~----~~v~~ 135 (343)
...+.++|+++.+.+..+.-. ..|.-=.|-... .|+-.+. ..|+-|++.. ..+.+.+..|. ..|..
T Consensus 86 g~~LQiFnletK~klks~~~~--e~VvfWkWis~~------~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIIn 156 (365)
T 2xzh_A 86 GKTLQIFNIEMKSKMKAHTMT--DDVTFWKWISLN------TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIIN 156 (365)
T ss_dssp TTEEEEEETTTTEEEEEEECS--SCEEEEEECSSS------EEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEE
T ss_pred CCeEEEechHHhhhhcceecC--CccEEEEecCCC------eEEEEcC-CcEEEEcccCCCCCceeeecchhcccceEEE
Confidence 678999999999988888766 578778887665 5555544 4899999964 35666666554 37777
Q ss_pred EEEecCCCEEEEEeC-------CCeEEEEEccCCceeEEEEcCCcceE-EEEeCCC-----CEEEEEe----CCcEEEEE
Q 019326 136 LAVHHSGKLALTVGR-------DDCLAMVNLVRGRRSFYHKIGKEASL-IKFDGSG-----EKFFMVT----EEKVGIHQ 198 (343)
Q Consensus 136 i~~~~~~~~l~~~~~-------d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~----~~~i~~~d 198 (343)
...+++.++++..+- .|.+.+|..+.+... ...+...+ ..+-.+| +.++.+. .+++.+.+
T Consensus 157 Y~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ---~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiE 233 (365)
T 2xzh_A 157 YRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ---PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 233 (365)
T ss_dssp EEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE---EECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEE
T ss_pred EEECCCCCEEEEEeEeccCCccceeEEEEeecccccc---eeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEE
Confidence 888888888776653 366788887665422 22222222 2222222 2334332 25788888
Q ss_pred cccc---e-----eEEEec-----CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEec
Q 019326 199 AEDA---K-----LLCELD-----GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTK 264 (343)
Q Consensus 199 ~~~~---~-----~~~~~~-----~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~ 264 (343)
+... . ....+. ...-..++..++ -+.++.-+.-|.|++||+.++.++..-+ -...+|-.-+....
T Consensus 234 i~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nr-IS~d~iF~ta~~~~ 312 (365)
T 2xzh_A 234 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR-ISGETIFVTAPHEA 312 (365)
T ss_dssp CSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEEEGG
T ss_pred cCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEec-cCCCceEEecccCC
Confidence 7432 1 111111 122345566653 4688888899999999999999998877 56666655555444
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 265 NDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 265 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.. =++.....|.|.--.++..
T Consensus 313 ~~---------Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 313 TA---------GIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp GT---------EEEEEETTCEEEEEEECTT
T ss_pred CC---------cEEEEcCCCEEEEEEECcc
Confidence 33 3666668888877777654
No 316
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.0012 Score=54.21 Aligned_cols=142 Identities=10% Similarity=0.091 Sum_probs=88.5
Q ss_pred ceEEEeeCCCeEEEEECCCcceeeeeeecc-ccEEEEEEe--c-CCCEEEEE-eCCCeEEEEEccCCceeEEEEcCCcce
Q 019326 101 RNLFSTSADGFVSIFDADPFVLLTSVKVHK-KGVNDLAVH--H-SGKLALTV-GRDDCLAMVNLVRGRRSFYHKIGKEAS 175 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~i~~~--~-~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~ 175 (343)
..++.++.||.|.-.|..+|+.+.+++... .++....-. + ++..++.. +.||.|..++..+|........+..+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 589999999999999999999999987541 222221100 1 22333333 589999999998886655554432221
Q ss_pred E--EEEe-----------CCCCEEEEE-eCCcEEEEEcccceeEEEecCCcce--------EEeee------cCCCeEEE
Q 019326 176 L--IKFD-----------GSGEKFFMV-TEEKVGIHQAEDAKLLCELDGKKRI--------LCAAP------GENGVLFT 227 (343)
Q Consensus 176 ~--~~~~-----------~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~i--------~~~~~------~~~~~l~~ 227 (343)
. +... ..+..++++ .++.+...|+++|+.+..+....+. .|... ..++.++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 1 2211 033444555 9999999999999999999843221 11111 12356777
Q ss_pred EeCCCcEEEEECCCCc
Q 019326 228 GGEDRSITAWDTNSGK 243 (343)
Q Consensus 228 ~~~dg~i~i~d~~~~~ 243 (343)
+..+..+.+.+ ++|+
T Consensus 171 g~~~y~v~~~~-~sG~ 185 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA 185 (339)
T ss_dssp EEEEEECEECC-TTSC
T ss_pred ecceEEEEEEC-CCCC
Confidence 77777777777 4454
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.43 E-value=0.017 Score=47.00 Aligned_cols=221 Identities=11% Similarity=0.065 Sum_probs=110.4
Q ss_pred CceEEEeeC----CCeEEEEEcCCCeeeeE--eccCCCCCeEEEEEeCCCCCCCCceEEEeeC----C-----CeEEEEE
Q 019326 52 GTAAASGGT----DDTIHLYDLSTSSSLGA--IHHHESSSVTSLAFYTPQNLSVPRNLFSTSA----D-----GFVSIFD 116 (343)
Q Consensus 52 ~~~l~s~~~----dg~i~iwd~~~~~~~~~--~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~----d-----g~i~iwd 116 (343)
+.+++.|+. -..+.+||..+.+-... +... ... .+++.. ++ ..++.|+. + ..+.+||
T Consensus 25 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~-~~~~~~-~~-----~lyv~GG~~~~~~~~~~~~~~~~~d 96 (308)
T 1zgk_A 25 RLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVP-RSG-LAGCVV-GG-----LLYAVGGRNNSPDGNTDSSALDCYN 96 (308)
T ss_dssp CCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSC-CBS-CEEEEE-TT-----EEEEECCEEEETTEEEECCCEEEEE
T ss_pred CEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcc-ccc-ceEEEE-CC-----EEEEECCCcCCCCCCeecceEEEEC
Confidence 566666663 24588999887753322 2211 111 122333 34 57777776 2 4688899
Q ss_pred CCCcc--eeeeeeeccccEEEEEEecCCCEEEEEeCC-----CeEEEEEccCCceeEEEEcCCc--ceEEEEeCCCCEEE
Q 019326 117 ADPFV--LLTSVKVHKKGVNDLAVHHSGKLALTVGRD-----DCLAMVNLVRGRRSFYHKIGKE--ASLIKFDGSGEKFF 187 (343)
Q Consensus 117 ~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 187 (343)
+.+.+ .+..+...........+ +++.++.|+.+ ..+.+||+.+.+-......+.. -..++.. ++..++
T Consensus 97 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv 173 (308)
T 1zgk_A 97 PMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYA 173 (308)
T ss_dssp TTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEE
T ss_pred CCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEE
Confidence 87643 22222211112222222 56677776643 4588899887764333222211 1222222 455555
Q ss_pred EE-e-----CCcEEEEEcccceeEEEe--cCCcceEEeeecCCCeEEEEeCC-----CcEEEEECCCCceeEEeccc-cc
Q 019326 188 MV-T-----EEKVGIHQAEDAKLLCEL--DGKKRILCAAPGENGVLFTGGED-----RSITAWDTNSGKVAYCIEDA-HS 253 (343)
Q Consensus 188 ~~-~-----~~~i~~~d~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~-h~ 253 (343)
.+ . ...+.+||+.+.+-...- .....-.+++..++.+++.|+.+ ..+.+||+.+.+-. .+... ..
T Consensus 174 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~ 252 (308)
T 1zgk_A 174 VGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWT-FVAPMKHR 252 (308)
T ss_dssp ECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEE-ECCCCSSC
T ss_pred EeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEE-ECCCCCCC
Confidence 55 2 245888998776533221 11111112222366777777654 56899999876422 22101 11
Q ss_pred ccEEEEEEEecCCCCCCCCCCeEEEEEcCC-----CcEEEEeccCc
Q 019326 254 ARVKGIVVLTKNDGGSTAENPYLVASASSD-----GVICVWDVRMA 294 (343)
Q Consensus 254 ~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~ 294 (343)
..-.+++.. ++. +++.|+.+ ..+.+||+.+.
T Consensus 253 r~~~~~~~~-~~~---------i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 253 RSALGITVH-QGR---------IYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CBSCEEEEE-TTE---------EEEECCBCSSCBCCEEEEEETTTT
T ss_pred ccceEEEEE-CCE---------EEEEcCcCCCcccceEEEEcCCCC
Confidence 111122222 332 77777654 35778888765
No 318
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.43 E-value=0.05 Score=47.14 Aligned_cols=152 Identities=9% Similarity=0.058 Sum_probs=92.3
Q ss_pred CeEEEEEeCC-CCCCCCceEEEeeCCCeEEEEECCCcceeeeeeec---cccEEEEEE-------ecCCCEEEEEeCCC-
Q 019326 85 SVTSLAFYTP-QNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVH---KKGVNDLAV-------HHSGKLALTVGRDD- 152 (343)
Q Consensus 85 ~v~~l~~~~~-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~~v~~i~~-------~~~~~~l~~~~~d~- 152 (343)
....|+|.|. .. +++++-...+.|++.|++++......... ......|+| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~----~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKD----HLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEE----EEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCCCC----EEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 4568999983 41 34444444567999998876554433321 125899999 99998666666543
Q ss_pred ------eEEEEEccC-Ccee-----EEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEcc-------ccee-------
Q 019326 153 ------CLAMVNLVR-GRRS-----FYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAE-------DAKL------- 204 (343)
Q Consensus 153 ------~i~~wd~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~-------~~~~------- 204 (343)
.|.+++... +... ........+..++++|++..|+.+ .++.|..+|+. ++..
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred CcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 266665433 1221 122223455678899965555554 78889999997 4443
Q ss_pred -------EEEecCCcceEEeeecC-CCeEEEE-eCCCcEEEEECC
Q 019326 205 -------LCELDGKKRILCAAPGE-NGVLFTG-GEDRSITAWDTN 240 (343)
Q Consensus 205 -------~~~~~~~~~i~~~~~~~-~~~l~~~-~~dg~i~i~d~~ 240 (343)
+...........+++++ ++.|+.+ +....|+.++..
T Consensus 296 ~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 296 NPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp CTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 11222334467888884 5544444 566788886653
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.43 E-value=0.017 Score=46.91 Aligned_cols=184 Identities=13% Similarity=0.135 Sum_probs=94.6
Q ss_pred EecCceEEEeeC----C-----CeEEEEEcCCCeeee--EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC-----CeE
Q 019326 49 AVSGTAAASGGT----D-----DTIHLYDLSTSSSLG--AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD-----GFV 112 (343)
Q Consensus 49 ~~~~~~l~s~~~----d-----g~i~iwd~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d-----g~i 112 (343)
.+.+.+++.|+. + ..+.+||..+.+-.. .+... ...-. ++.. ++ +.++.|+.+ ..+
T Consensus 68 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~-~~~~-~~-----~iyv~GG~~~~~~~~~~ 139 (308)
T 1zgk_A 68 VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP-RNRIG-VGVI-DG-----HIYAVGGSHGCIHHNSV 139 (308)
T ss_dssp EETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC-CBTCE-EEEE-TT-----EEEEECCEETTEECCCE
T ss_pred EECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC-ccccE-EEEE-CC-----EEEEEcCCCCCcccccE
Confidence 344667777765 2 458889988765322 22221 12222 2222 44 577777653 368
Q ss_pred EEEECCCcc--eeeeeeeccccEEEEEEecCCCEEEEEeCC-----CeEEEEEccCCceeEEEEcCC--cceEEEEeCCC
Q 019326 113 SIFDADPFV--LLTSVKVHKKGVNDLAVHHSGKLALTVGRD-----DCLAMVNLVRGRRSFYHKIGK--EASLIKFDGSG 183 (343)
Q Consensus 113 ~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~--~~~~~~~~~~~ 183 (343)
.+||+.+.+ .+..+.........+.+ +++.++.|+.+ ..+..||+.+.+-......+. ....+... ++
T Consensus 140 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~ 216 (308)
T 1zgk_A 140 ERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HN 216 (308)
T ss_dssp EEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TT
T ss_pred EEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CC
Confidence 889987643 22222211112122222 56677777654 458899988776433322221 11222222 45
Q ss_pred CEEEEE-eC-----CcEEEEEcccceeEEEec--CCcceEEeeecCCCeEEEEeCC-----CcEEEEECCCCc
Q 019326 184 EKFFMV-TE-----EKVGIHQAEDAKLLCELD--GKKRILCAAPGENGVLFTGGED-----RSITAWDTNSGK 243 (343)
Q Consensus 184 ~~~~~~-~~-----~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 243 (343)
..++.+ .+ ..+.+||+.+.+-...-. ....-.+++..++.+++.|+.+ ..+.+||+.+.+
T Consensus 217 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 217 CIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 555555 32 568899988765433212 1111112223366777777654 357788887654
No 320
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.42 E-value=0.024 Score=46.17 Aligned_cols=217 Identities=12% Similarity=0.060 Sum_probs=105.9
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCC--CCCeEEEEecCceEEEeeC----C-------CeEEEEEc
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAH--LSPITTVAVSGTAAASGGT----D-------DTIHLYDL 69 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~~~~~l~s~~~----d-------g~i~iwd~ 69 (343)
++.|+ ..+.+||..+ ..... ..+... ...-..+...+..++.|+. + ..+.+||.
T Consensus 8 ~~~GG--~~~~~yd~~~--------~~W~~---~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~ 74 (315)
T 4asc_A 8 FMISE--EGAVAYDPAA--------NECYC---ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDH 74 (315)
T ss_dssp EEEET--TEEEEEETTT--------TEEEE---EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEET
T ss_pred EEEcC--CceEEECCCC--------CeEec---CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecC
Confidence 44555 5788898876 12221 222221 1112222233677777773 1 12778888
Q ss_pred CCCeeee--EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC--------CeEEEEECCCcc--eeeeeeeccccEEEEE
Q 019326 70 STSSSLG--AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD--------GFVSIFDADPFV--LLTSVKVHKKGVNDLA 137 (343)
Q Consensus 70 ~~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~--~~~~~~~~~~~v~~i~ 137 (343)
.+.+-.. .+... ... .+++.. ++ ..++.|+.+ ..+.+||..+.+ .+..+.........+
T Consensus 75 ~~~~W~~~~~~p~~-r~~-~~~~~~-~~-----~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~- 145 (315)
T 4asc_A 75 LDSEWLGMPPLPSP-RCL-FGLGEA-LN-----SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVL- 145 (315)
T ss_dssp TTTEEEECCCBSSC-EES-CEEEEE-TT-----EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-
T ss_pred CCCeEEECCCCCcc-hhc-eeEEEE-CC-----EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEE-
Confidence 8765322 11111 111 122222 33 567777742 468899987643 222222111111222
Q ss_pred EecCCCEEEEEeC------CCeEEEEEccCCceeEEEEcCCc--ceEEEEeCCCCEEEEE-eCC-----cEEEEEcccce
Q 019326 138 VHHSGKLALTVGR------DDCLAMVNLVRGRRSFYHKIGKE--ASLIKFDGSGEKFFMV-TEE-----KVGIHQAEDAK 203 (343)
Q Consensus 138 ~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~-----~i~~~d~~~~~ 203 (343)
..+++.++.|+. -..+.+||+.+.+-......+.+ ...++.. +++.++.+ .++ .+.+||+.+.+
T Consensus 146 -~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 146 -SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp -EETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred -EECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 235667777775 24688999887764333222221 1222222 55555555 322 47788887764
Q ss_pred eEEEec--CCcceEEeeecCCCeEEEEeCCC--------------cEEEEECCCCc
Q 019326 204 LLCELD--GKKRILCAAPGENGVLFTGGEDR--------------SITAWDTNSGK 243 (343)
Q Consensus 204 ~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg--------------~i~i~d~~~~~ 243 (343)
-...-. ....-.+++..++.+++.|+.++ .+.+||+.+.+
T Consensus 224 W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 224 WAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 333222 11111122233666677776532 36677877654
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.41 E-value=0.037 Score=45.09 Aligned_cols=178 Identities=7% Similarity=0.039 Sum_probs=90.2
Q ss_pred EEEeeCCCeEEEEEcCCCeeee-EeccCCCCCeEEEEEeCCCCCCCCceEEEeeC----C-------CeEEEEECCCcce
Q 019326 55 AASGGTDDTIHLYDLSTSSSLG-AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA----D-------GFVSIFDADPFVL 122 (343)
Q Consensus 55 l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~----d-------g~i~iwd~~~~~~ 122 (343)
++.|+ ..+.+||..+++-.. .+... ......-....++ ..++.|+. + ..+.+||..+.+-
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p-~~r~~~~~~~~~~-----~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQ-VPKNHVSLVTKEN-----QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCC-SCSSEEEEECTTC-----CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCC-CCccceEEEEECC-----EEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 44455 569999999886432 12111 1222222333344 57777773 1 1277888876432
Q ss_pred --eeeeeeccccEEEEEEecCCCEEEEEeCC--------CeEEEEEccCCceeEEEEcCCc--ceEEEEeCCCCEEEEE-
Q 019326 123 --LTSVKVHKKGVNDLAVHHSGKLALTVGRD--------DCLAMVNLVRGRRSFYHKIGKE--ASLIKFDGSGEKFFMV- 189 (343)
Q Consensus 123 --~~~~~~~~~~v~~i~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~- 189 (343)
+..+.........+.+ ++..++.|+.+ ..+.+||..+.+-......+.+ -.+++. .+++.++.+
T Consensus 80 ~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG 156 (315)
T 4asc_A 80 LGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGG 156 (315)
T ss_dssp EECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECC
T ss_pred EECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeC
Confidence 2222111111111222 55667777632 4588999987754332222221 122222 345555555
Q ss_pred e-C-----CcEEEEEcccceeEEEec--CCcceEEeeecCCCeEEEEeCCC-----cEEEEECCCCc
Q 019326 190 T-E-----EKVGIHQAEDAKLLCELD--GKKRILCAAPGENGVLFTGGEDR-----SITAWDTNSGK 243 (343)
Q Consensus 190 ~-~-----~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~ 243 (343)
. + ..+.+||..+.+-...-. ....-.+++..++.+++.|+.++ .+.+||+.+.+
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 3 2 468889988765333222 11111222233667777777654 48889988764
No 322
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=97.26 E-value=0.05 Score=43.53 Aligned_cols=251 Identities=13% Similarity=0.050 Sum_probs=133.3
Q ss_pred CeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCccee
Q 019326 44 PITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL 123 (343)
Q Consensus 44 ~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 123 (343)
.|..++......+.-. ||.|..|-....-.+..-... ...|..++..... .++. . ||.|+.|-....-.+
T Consensus 25 ~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~-~~~i~~ia~G~~h------s~~l-~-~G~v~~wG~n~~Gql 94 (282)
T 3qhy_B 25 GVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAAT-QSGVDAIAAGNYH------SLAL-K-DGEVIAWGGNEDGQT 94 (282)
T ss_dssp SCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCGGG-GSCCCEEEECSSE------EEEE-E-TTEEEEEECCTTSTT
T ss_pred CCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCccC-CCCEEEEEeCCCE------EEEE-E-CCEEEEeeCCCCCCC
Confidence 5777777644433335 899999976543222211112 3467777776543 3444 4 999999986432211
Q ss_pred eeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeE-EEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccc
Q 019326 124 TSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF-YHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDA 202 (343)
Q Consensus 124 ~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 202 (343)
..-..-...|..++.... +.+... ||.|+.|-....-++. .......+..++.. ....+...++.+..|-....
T Consensus 95 g~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G--~~~~~~l~~G~v~~wG~n~~ 169 (282)
T 3qhy_B 95 TVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGG--VYTALAVKNGGVIAWGDNYF 169 (282)
T ss_dssp CCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEEC--SSEEEEEETTEEEEEECCTT
T ss_pred CCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcc--cCEEEEEECCEEEEecCCCC
Confidence 110111246777777655 334445 8999999765432211 11112334444432 22222224788888865432
Q ss_pred eeEE-EecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEc
Q 019326 203 KLLC-ELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASAS 281 (343)
Q Consensus 203 ~~~~-~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 281 (343)
..+. .......|..++......++. .||.|+.|-....-.+. ++......|..++..... .++..
T Consensus 170 gqlg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg-~p~~~~~~v~~i~~G~~h----------~~al~- 235 (282)
T 3qhy_B 170 GQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTT-VPTEALSGVSAIASGEWY----------SLALK- 235 (282)
T ss_dssp STTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTC-CCGGGGSSCCEEEECSSC----------EEEEE-
T ss_pred CCCCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCCC-CCcccCCCceEEEcCCCE----------EEEEE-
Confidence 2111 111234577777754445555 59999999765432221 111223456677654443 33333
Q ss_pred CCCcEEEEeccCccccCCCcccccccccceeEEEcCCCCceeccccCCCCC
Q 019326 282 SDGVICVWDVRMAIKEKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDSAP 332 (343)
Q Consensus 282 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~~ 332 (343)
||.|..|=..... +.. ....|..++......+.+....+...
T Consensus 236 -~g~v~~wG~n~~g---q~~-----v~~~v~~iaaG~~h~~al~~~~~~~~ 277 (282)
T 3qhy_B 236 -NGKVIAWGSSRTA---PSS-----VQSGVSSIEAGPNAAYALKGGSGSGH 277 (282)
T ss_dssp -TTEEEEESTTCCC---CGG-----GSSCEEEEEECSSCEEEEEC------
T ss_pred -CCEEEEecCCCCc---ccc-----CCCCcEEEEECcCeEEEEecCCCCCc
Confidence 9999999766532 111 13468888888887777766554433
No 323
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.20 E-value=0.072 Score=44.19 Aligned_cols=223 Identities=15% Similarity=0.082 Sum_probs=107.3
Q ss_pred cCceEEEeeC-CCeEEEEEcCC--C--eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC-C---------CeEEEE
Q 019326 51 SGTAAASGGT-DDTIHLYDLST--S--SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA-D---------GFVSIF 115 (343)
Q Consensus 51 ~~~~l~s~~~-dg~i~iwd~~~--~--~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~-d---------g~i~iw 115 (343)
.+.+++.|+. ...+.+||..+ . +.+..+....... .+++.. ++ .+++.|+. + ..+.+|
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~-~~~~~~-~~-----~lyv~GG~~~~~~~~~~~~~~v~~y 91 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQ-ATSAFI-DG-----NLYVFGGIGKNSEGLTQVFNDVHKY 91 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBS-CEEEEE-TT-----EEEEECCEEECTTSCEEECCCEEEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCcc-ceEEEE-CC-----EEEEEcCCCCCCCccceeeccEEEE
Confidence 4666666654 34688888864 2 2222222110111 223333 34 57777776 2 468899
Q ss_pred ECCCcc--eeeeee-eccccEEEEEEecCCCEEEEEeCC---------------------------------------Ce
Q 019326 116 DADPFV--LLTSVK-VHKKGVNDLAVHHSGKLALTVGRD---------------------------------------DC 153 (343)
Q Consensus 116 d~~~~~--~~~~~~-~~~~~v~~i~~~~~~~~l~~~~~d---------------------------------------~~ 153 (343)
|+.+.+ .+..+. ........+. .++++++.|+.+ ..
T Consensus 92 d~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (357)
T 2uvk_A 92 NPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKF 169 (357)
T ss_dssp ETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCE
T ss_pred eCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCccc
Confidence 987643 222222 1111222222 467777888764 57
Q ss_pred EEEEEccCCceeEEEEcCCc--c-eEEEEeCCCCEEEEE-e------CCcEEEEEc--ccceeEEEec---CCcc--eEE
Q 019326 154 LAMVNLVRGRRSFYHKIGKE--A-SLIKFDGSGEKFFMV-T------EEKVGIHQA--EDAKLLCELD---GKKR--ILC 216 (343)
Q Consensus 154 i~~wd~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~-~------~~~i~~~d~--~~~~~~~~~~---~~~~--i~~ 216 (343)
+.+||+.+.+-......+.. . ..++.. +++.++.+ . ...+..||+ .+.+ ...+. .... -.+
T Consensus 170 v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~-W~~~~~~~~~~~~~~~~ 247 (357)
T 2uvk_A 170 LLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLK-WNKLAPVSSPDGVAGGF 247 (357)
T ss_dssp EEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CE-EEECCCSSTTTCCBSCE
T ss_pred EEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCc-EEecCCCCCCcccccce
Confidence 89999988775544444322 2 233333 44555544 2 235667776 3332 22222 1111 112
Q ss_pred eeecCCCeEEEEeCC----------------------CcEEEEECCCCc--eeEEecccccccEEEEEEEecCCCCCCCC
Q 019326 217 AAPGENGVLFTGGED----------------------RSITAWDTNSGK--VAYCIEDAHSARVKGIVVLTKNDGGSTAE 272 (343)
Q Consensus 217 ~~~~~~~~l~~~~~d----------------------g~i~i~d~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 272 (343)
+...++.+++.|+.+ ..+.+||+.+.+ .+..+. .....-.+ +..++.
T Consensus 248 ~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~--~~~~~~------ 318 (357)
T 2uvk_A 248 AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELS-QGRAYGVS--LPWNNS------ 318 (357)
T ss_dssp EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECS-SCCBSSEE--EEETTE------
T ss_pred EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCC-CCccccee--EEeCCE------
Confidence 333366777777632 257789987653 333343 11111112 222333
Q ss_pred CCeEEEEEcCCC------cEEEEeccCccc
Q 019326 273 NPYLVASASSDG------VICVWDVRMAIK 296 (343)
Q Consensus 273 ~~~~l~s~~~dg------~i~vwd~~~~~~ 296 (343)
+++.|+.++ .|.++++++.+.
T Consensus 319 ---i~v~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 319 ---LLIIGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp ---EEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred ---EEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence 777787653 355557776643
No 324
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.17 E-value=0.067 Score=43.57 Aligned_cols=181 Identities=13% Similarity=0.142 Sum_probs=89.4
Q ss_pred CceEEEeeC----CC-------eEEEEEcCCCeeee--EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC-------Ce
Q 019326 52 GTAAASGGT----DD-------TIHLYDLSTSSSLG--AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD-------GF 111 (343)
Q Consensus 52 ~~~l~s~~~----dg-------~i~iwd~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d-------g~ 111 (343)
+..++.|+. ++ .+.+||..+.+-.. .+... ... .+++.. ++ ..++.|+.+ ..
T Consensus 57 ~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~-~~~~~~-~~-----~iyv~GG~~~~~~~~~~~ 128 (318)
T 2woz_A 57 NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA-RCL-FGLGEV-DD-----KIYVVAGKDLQTEASLDS 128 (318)
T ss_dssp SCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC-BCS-CEEEEE-TT-----EEEEEEEEBTTTCCEEEE
T ss_pred CEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc-ccc-cceEEE-CC-----EEEEEcCccCCCCcccce
Confidence 667777773 12 27788887765332 22211 111 222222 34 567777754 35
Q ss_pred EEEEECCCcce--eeeeeeccccEEEEEEecCCCEEEEEeC------CCeEEEEEccCCceeEEEEcCCc--ceEEEEeC
Q 019326 112 VSIFDADPFVL--LTSVKVHKKGVNDLAVHHSGKLALTVGR------DDCLAMVNLVRGRRSFYHKIGKE--ASLIKFDG 181 (343)
Q Consensus 112 i~iwd~~~~~~--~~~~~~~~~~v~~i~~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~ 181 (343)
+.+||..+.+- +..+......-. ++. .+++.++.|+. -..+.+||+.+.+-......+.+ ...++..
T Consensus 129 ~~~yd~~~~~W~~~~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 205 (318)
T 2woz_A 129 VLCYDPVAAKWSEVKNLPIKVYGHN-VIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH- 205 (318)
T ss_dssp EEEEETTTTEEEEECCCSSCEESCE-EEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred EEEEeCCCCCEeECCCCCCcccccE-EEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-
Confidence 78888876432 222211111111 112 35667677764 24588999988764433333221 1223332
Q ss_pred CCCEEEEE-e-C----CcEEEEEcccceeEEE--ecCCcceEEeeecCCCeEEEEeCC--------------CcEEEEEC
Q 019326 182 SGEKFFMV-T-E----EKVGIHQAEDAKLLCE--LDGKKRILCAAPGENGVLFTGGED--------------RSITAWDT 239 (343)
Q Consensus 182 ~~~~~~~~-~-~----~~i~~~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d--------------g~i~i~d~ 239 (343)
++..++.+ . + ..+.+||+.+.+-... ++....-.++...++.+++.|+.+ ..+.+||+
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~ 285 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYED 285 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEET
T ss_pred CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeC
Confidence 45555555 2 2 3466888877653322 111111112233366677777653 35778888
Q ss_pred CCCc
Q 019326 240 NSGK 243 (343)
Q Consensus 240 ~~~~ 243 (343)
.+.+
T Consensus 286 ~~~~ 289 (318)
T 2woz_A 286 DKKE 289 (318)
T ss_dssp TTTE
T ss_pred CCCE
Confidence 7654
No 325
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.15 E-value=0.09 Score=44.37 Aligned_cols=212 Identities=13% Similarity=0.117 Sum_probs=136.1
Q ss_pred CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC-cceeeeeeecc----ccEEE
Q 019326 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP-FVLLTSVKVHK----KGVND 135 (343)
Q Consensus 61 dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~----~~v~~ 135 (343)
..++.++|+++...+..+.-. ..|.-=.|-.+. .|+-.+ +..|+-|++.. ..++..+..|. ..|..
T Consensus 85 g~~lQiFnle~K~klks~~~~--e~VvfWkWis~~------~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIIn 155 (494)
T 1bpo_A 85 GKTLQIFNIEMKSKMKAHTMT--DDVTFWKWISLN------TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIIN 155 (494)
T ss_dssp TTEEEEEETTTTEEEEEEECS--SCCCEEEEEETT------EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEE
T ss_pred CCeEEEEchHHhhhhcceecC--CCceEEEecCCC------eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEE
Confidence 688999999999888888766 467677777665 555554 34899999964 35666666554 37778
Q ss_pred EEEecCCCEEEEEeC-------CCeEEEEEccCCceeEEEEcCCcceE-EEEeCCC-----CEEEEEe----CCcEEEEE
Q 019326 136 LAVHHSGKLALTVGR-------DDCLAMVNLVRGRRSFYHKIGKEASL-IKFDGSG-----EKFFMVT----EEKVGIHQ 198 (343)
Q Consensus 136 i~~~~~~~~l~~~~~-------d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~----~~~i~~~d 198 (343)
...+++.++++..+- .|.+.+|..+.+..... .+...+ ..+-.+| ..++.+. .+++.+.+
T Consensus 156 Y~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~i---eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~E 232 (494)
T 1bpo_A 156 YRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI---EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 232 (494)
T ss_dssp EEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEE---CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEE
T ss_pred EEECCCCCeEEEEeecccCCcccceEEEeeccccccchh---eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEE
Confidence 888888888776553 46778888776543222 222211 2222222 2333332 36788888
Q ss_pred cccc--------eeEEEec-----CCcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEec
Q 019326 199 AEDA--------KLLCELD-----GKKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTK 264 (343)
Q Consensus 199 ~~~~--------~~~~~~~-----~~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~ 264 (343)
+... +....+. ...-..++..++ -+.++.-+.-|.|++||+.++.++..-+ -...+|..-+....
T Consensus 233 i~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr-Is~~~iF~t~~~~~ 311 (494)
T 1bpo_A 233 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR-ISGETIFVTAPHEA 311 (494)
T ss_dssp CSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEEETT
T ss_pred cCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec-ccCCceEEecccCC
Confidence 7432 1111111 122345566653 4688888999999999999999998877 56666655544443
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 265 NDGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 265 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
.. =++.....|.|.--.++..
T Consensus 312 ~~---------Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 312 TA---------GIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp TT---------EEEEEETTCEEEEEEECTT
T ss_pred CC---------cEEEEccCceEEEEEEccc
Confidence 33 4666668888877777654
No 326
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.10 E-value=0.08 Score=42.84 Aligned_cols=213 Identities=8% Similarity=0.021 Sum_probs=128.1
Q ss_pred CCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEec
Q 019326 61 DDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHH 140 (343)
Q Consensus 61 dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~ 140 (343)
+.+|.|-|+.++.....-.-.-++ .-.+|.. +.++.-. ..++.++|+++.+.+..+.- ...|.-=.|-.
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~Ads----AIMnP~~-----~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis 116 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISADS----AIMNPAS-----KVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS 116 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCSE----EEECSSS-----SEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECS
T ss_pred CCEEEEEECCCCCCccccccccce----eeeCCCc-----cEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecC
Confidence 347888898876544322111022 3347776 4555443 77999999999888888774 45666666765
Q ss_pred CCCEEEEEeCCCeEEEEEccCC-ceeEEEEc-----CCcceEEEEeCCCCEEEEE----e----CCcEEEEEcccceeEE
Q 019326 141 SGKLALTVGRDDCLAMVNLVRG-RRSFYHKI-----GKEASLIKFDGSGEKFFMV----T----EEKVGIHQAEDAKLLC 206 (343)
Q Consensus 141 ~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~----~----~~~i~~~d~~~~~~~~ 206 (343)
+. .|+..+ +..|+-|++... .+...+.. ..++.....+++.++++.. . .|.+.+|..+......
T Consensus 117 ~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ 194 (365)
T 2xzh_A 117 LN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP 194 (365)
T ss_dssp SS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEE
T ss_pred CC-eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccce
Confidence 43 444443 458999999753 33333332 2456667778888877665 1 3567788876654333
Q ss_pred EecCCcceEEeeecC----CCeEEEEeC---CCcEEEEECCCC---c-----eeEEec---ccccccEEEEEEEecCCCC
Q 019326 207 ELDGKKRILCAAPGE----NGVLFTGGE---DRSITAWDTNSG---K-----VAYCIE---DAHSARVKGIVVLTKNDGG 268 (343)
Q Consensus 207 ~~~~~~~i~~~~~~~----~~~l~~~~~---dg~i~i~d~~~~---~-----~~~~~~---~~h~~~v~~~~~~~~~~~~ 268 (343)
--.|......+.... ..+++.+.. .+.+++.++... . ....+. .+..+-.-++.+++...
T Consensus 195 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg-- 272 (365)
T 2xzh_A 195 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-- 272 (365)
T ss_dssp ECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT--
T ss_pred eeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC--
Confidence 222434333333321 113333322 258999988432 1 112221 12245567788888777
Q ss_pred CCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 269 STAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 269 ~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
.++.-+.-|.|++||++++.
T Consensus 273 -------viyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 273 -------VVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp -------EEEEEETTSEEEEEETTTCC
T ss_pred -------EEEEEeCCcEEEEEEcccCc
Confidence 88888999999999999984
No 327
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.06 E-value=0.1 Score=43.35 Aligned_cols=232 Identities=13% Similarity=0.097 Sum_probs=124.8
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc--eeeee----eeccccEEEEEEecC---CCEEEEEe-C---
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV--LLTSV----KVHKKGVNDLAVHHS---GKLALTVG-R--- 150 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~----~~~~~~v~~i~~~~~---~~~l~~~~-~--- 150 (343)
.....|+|.|++ +.|+.+...|.|++++..... .+..+ .........|+++|+ +..|.... .
T Consensus 18 ~~P~~i~~~pdG-----~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 18 DHPWALAFLPDN-----HGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp SSEEEEEECSTT-----CCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred CCcEEEEEcCCC-----CEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 456899999998 536666778999999864321 11111 112346789999995 44444442 2
Q ss_pred ----CCeEEEEEccCCc--e----eEEEEcC------CcceEEEEeCCCCEEEEEeC--------------CcEEEEEcc
Q 019326 151 ----DDCLAMVNLVRGR--R----SFYHKIG------KEASLIKFDGSGEKFFMVTE--------------EKVGIHQAE 200 (343)
Q Consensus 151 ----d~~i~~wd~~~~~--~----~~~~~~~------~~~~~~~~~~~~~~~~~~~~--------------~~i~~~d~~ 200 (343)
...|..+++.... . ......+ +....+.|.|++.++++..+ +.|.-++..
T Consensus 93 ~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d 172 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ 172 (353)
T ss_dssp SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT
T ss_pred CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCC
Confidence 2356666665331 1 1111111 33567999999966665533 346556554
Q ss_pred cce------------eEEEec-CCcceEEeeecC-CCeEEEEeCCC--cEEEEECCCC----------------------
Q 019326 201 DAK------------LLCELD-GKKRILCAAPGE-NGVLFTGGEDR--SITAWDTNSG---------------------- 242 (343)
Q Consensus 201 ~~~------------~~~~~~-~~~~i~~~~~~~-~~~l~~~~~dg--~i~i~d~~~~---------------------- 242 (343)
..- ....+. .......++|++ .+.|+++.... .=.|.-+..+
T Consensus 173 G~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~ 252 (353)
T 2g8s_A 173 GEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEA 252 (353)
T ss_dssp SCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTC
T ss_pred CCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcc
Confidence 220 111111 223456777875 55666554321 1112111111
Q ss_pred ---------ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcccccccccceeE
Q 019326 243 ---------KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPLAEAKTNSRLTC 313 (343)
Q Consensus 243 ---------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~i~~ 313 (343)
.++..+. +...+..+++.....- -..++.++++.-..+.|...+++.+.......+.. ....++..
T Consensus 253 ~~~~~~~~~~P~~~~~--~~~ap~G~~~y~g~~f--p~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~ 327 (353)
T 2g8s_A 253 KGEIVAGTEQPVFYWK--DSPAVSGMAFYNSDKF--PQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILT-DRGQRIRD 327 (353)
T ss_dssp CBSSCTTSCCCSEEES--SCCCEEEEEEECCSSS--GGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESG-GGCCCEEE
T ss_pred cCCCCCCccCCeEEeC--CCcCcceeEEECCccC--cccCCcEEEEEccCCEEEEEEeCCCeEeeeEEccc-CCCCceeE
Confidence 1223333 3346778888754321 01345588887788888888887542111111111 22457999
Q ss_pred EEcCCCCceecc
Q 019326 314 LAGSSTKSFKRP 325 (343)
Q Consensus 314 ~~~s~~~~~~~~ 325 (343)
+++.||+.+.+.
T Consensus 328 v~~~pdG~lyv~ 339 (353)
T 2g8s_A 328 VRTGPDGYLYVL 339 (353)
T ss_dssp EEECTTSCEEEE
T ss_pred EEECCCCcEEEE
Confidence 999999987765
No 328
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.00 E-value=0.12 Score=42.99 Aligned_cols=219 Identities=12% Similarity=0.034 Sum_probs=115.2
Q ss_pred CCCeEEEEec-CceEEEeeCCCeEEEEEcCCCe-eeeEec--cCCCCCeEEEEEeCC---CCCCCCceEEEeeC----C-
Q 019326 42 LSPITTVAVS-GTAAASGGTDDTIHLYDLSTSS-SLGAIH--HHESSSVTSLAFYTP---QNLSVPRNLFSTSA----D- 109 (343)
Q Consensus 42 ~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~-~~~~~~--~~~~~~v~~l~~~~~---~~~~~~~~l~s~~~----d- 109 (343)
-.....|+|. ...|+.+..+|.|++++. +++ .+..+. .........|+++|+ + ..|+.+.. +
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~-----g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKK-----SWVYLYASYFAEGG 101 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTS-----CEEEEEEEEECGGG
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcC-----CEEEEEEeccCCCC
Confidence 4557789998 444666677799999973 454 222221 111356899999997 3 24444332 3
Q ss_pred ---CeEEEEECCCc-------cee-eeeee-ccccEEEEEEecCCCEEEEEeC-------------CCeEEEEEccCCc-
Q 019326 110 ---GFVSIFDADPF-------VLL-TSVKV-HKKGVNDLAVHHSGKLALTVGR-------------DDCLAMVNLVRGR- 163 (343)
Q Consensus 110 ---g~i~iwd~~~~-------~~~-~~~~~-~~~~v~~i~~~~~~~~l~~~~~-------------d~~i~~wd~~~~~- 163 (343)
..|..|+.... +.+ ..+.. .......|+|.|+|.++++.+. .|.|.-++....-
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred CcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 56777776543 111 11221 1113467999999987776543 2455555543210
Q ss_pred ------eeEEEEcC-CcceEEEEeC-CCCEEEEE-eCC---cEEEEEccc----------------ceeEEEe-cCCcce
Q 019326 164 ------RSFYHKIG-KEASLIKFDG-SGEKFFMV-TEE---KVGIHQAED----------------AKLLCEL-DGKKRI 214 (343)
Q Consensus 164 ------~~~~~~~~-~~~~~~~~~~-~~~~~~~~-~~~---~i~~~d~~~----------------~~~~~~~-~~~~~i 214 (343)
........ .....++|+| ++..+++- ..+ .|.+...-. ..++..+ ......
T Consensus 182 ~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap 261 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAP 261 (354)
T ss_dssp TTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCE
T ss_pred CCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCC
Confidence 01112222 3456799999 55554444 222 233322100 0122232 123345
Q ss_pred EEeeec--------CCCeEEEEeCCCcEEEEECCCC-cee--EEecccccccEEEEEEEecCC
Q 019326 215 LCAAPG--------ENGVLFTGGEDRSITAWDTNSG-KVA--YCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 215 ~~~~~~--------~~~~l~~~~~dg~i~i~d~~~~-~~~--~~~~~~h~~~v~~~~~~~~~~ 266 (343)
..+.+. .+.++++.-..+.|...++... +.. ..+.......+..+++.|++.
T Consensus 262 ~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~ 324 (354)
T 3a9g_A 262 SGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGG 324 (354)
T ss_dssp EEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSC
T ss_pred cceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCc
Confidence 666662 3456666566678888887743 222 222212235677787777664
No 329
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.96 E-value=0.17 Score=44.20 Aligned_cols=226 Identities=12% Similarity=0.133 Sum_probs=133.6
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCC--------------------CCe--EEEEec-----CceE
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHL--------------------SPI--TTVAVS-----GTAA 55 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~--------------------~~v--~~l~~~-----~~~l 55 (343)
+.+|+..|.|+|+-+.+ ++.+...++++...-. +.. ..+++. |++|
T Consensus 73 f~SgG~sG~v~v~G~PS-------mR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGryl 145 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPS-------MRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYL 145 (638)
T ss_dssp EEECGGGCCEEEEEETT-------TEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEE
T ss_pred EeecCcCceEEEEecCC-------cceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEE
Confidence 67899999999999987 3444444433211100 000 123332 5666
Q ss_pred EEee-CCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEe--CCCCCCCCceEEEeeCC-------CeE------------E
Q 019326 56 ASGG-TDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFY--TPQNLSVPRNLFSTSAD-------GFV------------S 113 (343)
Q Consensus 56 ~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~--~~~~~~~~~~l~s~~~d-------g~i------------~ 113 (343)
+.-. ....|-.-+++..++-..+.-.....+..++|- |+. .+++.++.. |.. .
T Consensus 146 fiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T-----~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 146 FINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHT-----KYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBC-----CEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred EEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCc-----cEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 6655 456787888888877666654446788999887 555 677777652 221 1
Q ss_pred EEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC---------------------------------------CC-e
Q 019326 114 IFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR---------------------------------------DD-C 153 (343)
Q Consensus 114 iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~---------------------------------------d~-~ 153 (343)
..|..+++...++.- .+........+++.+.++.+. +| .
T Consensus 221 ~iD~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 221 AIDAETMEMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp EEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred EEcCCccEEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 123333333332221 112223334555555555442 11 2
Q ss_pred EEEEEccC----C-ceeEEEEcCCcceEEEEeCCCCEEEEE--eCCcEEEEEccccee-------------EEEecCCcc
Q 019326 154 LAMVNLVR----G-RRSFYHKIGKEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAKL-------------LCELDGKKR 213 (343)
Q Consensus 154 i~~wd~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~-------------~~~~~~~~~ 213 (343)
+.+.|.+. + ........+..+..+.++|+|++++++ .+.++.++|.+.... ....+..-.
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 45555554 2 234455666777889999999999999 788999999985211 233334445
Q ss_pred eEEeeecCCCeE-EEEeCCCcEEEEECCC
Q 019326 214 ILCAAPGENGVL-FTGGEDRSITAWDTNS 241 (343)
Q Consensus 214 i~~~~~~~~~~l-~~~~~dg~i~i~d~~~ 241 (343)
....+|.+.... .+-.-|..|.-|++..
T Consensus 380 PlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 380 PLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred ccEEEECCCCceEeeeeecceEEEEeccH
Confidence 667778644444 4455799999999865
No 330
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.94 E-value=0.13 Score=42.60 Aligned_cols=56 Identities=21% Similarity=0.161 Sum_probs=28.7
Q ss_pred cEEEEEcccceeE--EEecC-CcceEEeeecCCCeEEEEeCCC------cEEEEECCCCceeEEec
Q 019326 193 KVGIHQAEDAKLL--CELDG-KKRILCAAPGENGVLFTGGEDR------SITAWDTNSGKVAYCIE 249 (343)
Q Consensus 193 ~i~~~d~~~~~~~--~~~~~-~~~i~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~ 249 (343)
.+.+||+.+.+-. ..+.. .....++.+ ++.+++.|+.++ .|.++++++++.+...+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPW-NNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEE-TTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEe-CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 4678888765432 22221 122223333 677777777543 36667888877665544
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.86 E-value=0.14 Score=41.67 Aligned_cols=179 Identities=13% Similarity=0.126 Sum_probs=88.8
Q ss_pred eEEEeeCCCeEEEEEcCCCeeee-EeccCCCCCeEEEEEeCCCCCCCCceEEEeeC----CC-------eEEEEECCCcc
Q 019326 54 AAASGGTDDTIHLYDLSTSSSLG-AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA----DG-------FVSIFDADPFV 121 (343)
Q Consensus 54 ~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~----dg-------~i~iwd~~~~~ 121 (343)
.++.|+. .+..||..+++-.. .+.......-.+++ ..++ ..++.|+. ++ .+.+||..+.+
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~-----~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 89 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIV-TQQN-----QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE 89 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEE-CSSS-----CEEEEESSCC-------CCCBEEEEEETTTTE
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEE-EECC-----EEEEECCcccCccccCCCccccEEEEeCCCCc
Confidence 3444443 37899998876443 12211012222333 3344 57777773 12 27788876543
Q ss_pred e--eeeeeeccccEEEEEEecCCCEEEEEeCC-------CeEEEEEccCCceeEEEEcCCcc--eEEEEeCCCCEEEEE-
Q 019326 122 L--LTSVKVHKKGVNDLAVHHSGKLALTVGRD-------DCLAMVNLVRGRRSFYHKIGKEA--SLIKFDGSGEKFFMV- 189 (343)
Q Consensus 122 ~--~~~~~~~~~~v~~i~~~~~~~~l~~~~~d-------~~i~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~- 189 (343)
- +..+...........+ +++.++.|+.+ ..+.+||+.+.+-......+.+. ..++. .++..++.+
T Consensus 90 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG 166 (318)
T 2woz_A 90 WVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGG 166 (318)
T ss_dssp EEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECC
T ss_pred EEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcC
Confidence 2 2222211111122222 56677777753 34788888877644333333221 12222 355555555
Q ss_pred e------CCcEEEEEcccceeEEEec--CCcceEEeeecCCCeEEEEeCC-----CcEEEEECCCCc
Q 019326 190 T------EEKVGIHQAEDAKLLCELD--GKKRILCAAPGENGVLFTGGED-----RSITAWDTNSGK 243 (343)
Q Consensus 190 ~------~~~i~~~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 243 (343)
. -..+.+||+.+.+-...-. ....-.+++..++.+++.|+.+ ..+.+||+.+.+
T Consensus 167 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 167 KTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 2 2358899988765433222 1111112233366777777643 347789988764
No 332
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.85 E-value=0.17 Score=42.58 Aligned_cols=139 Identities=12% Similarity=0.146 Sum_probs=91.6
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCceeEEEEcC-----CcceEEEEeCCCCEEEEEeCCcEEEEEcccce-----------
Q 019326 140 HSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG-----KEASLIKFDGSGEKFFMVTEEKVGIHQAEDAK----------- 203 (343)
Q Consensus 140 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~----------- 203 (343)
.++..++.+- ++.||.-++.....-.....+ ..+..+..+|+|.+++..++..|.|..+..+.
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccc
Confidence 3444444443 467777777644433334443 26788999999999999999999999888322
Q ss_pred -eEEEec-------CCcceEEeeecC----CCeEEEEeCCCcEEEEECCCCc--eeEEec--------ccccccEEEEEE
Q 019326 204 -LLCELD-------GKKRILCAAPGE----NGVLFTGGEDRSITAWDTNSGK--VAYCIE--------DAHSARVKGIVV 261 (343)
Q Consensus 204 -~~~~~~-------~~~~i~~~~~~~----~~~l~~~~~dg~i~i~d~~~~~--~~~~~~--------~~h~~~v~~~~~ 261 (343)
..+.+. ...+|..+.|++ +..|++-..|+.|++||+.... +. .+. ......|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 112222 246799999994 5588899999999999998532 22 332 022356788888
Q ss_pred EecCCCCCCCCCCeEEEE--EcCCCcEEEE
Q 019326 262 LTKNDGGSTAENPYLVAS--ASSDGVICVW 289 (343)
Q Consensus 262 ~~~~~~~~~~~~~~~l~s--~~~dg~i~vw 289 (343)
.+++- .|.. .+..|-|+-.
T Consensus 188 g~~~l---------TLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 188 SKDGL---------TLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CTTSS---------CEEEEECTTSCEEEEE
T ss_pred cCCCc---------EEEEEecCCCCCEEEE
Confidence 87554 4444 5577777543
No 333
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.83 E-value=0.091 Score=44.21 Aligned_cols=141 Identities=14% Similarity=0.112 Sum_probs=88.6
Q ss_pred EEeCCCCEEEEEeCCcEEEEEcccceeEEEecCC-----cceEEeeecCCCeEEEEeCCCcEEEEECCCCc---------
Q 019326 178 KFDGSGEKFFMVTEEKVGIHQAEDAKLLCELDGK-----KRILCAAPGENGVLFTGGEDRSITAWDTNSGK--------- 243 (343)
Q Consensus 178 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--------- 243 (343)
....++..++.+.++.||.-++......+.+..+ ..+..+..++.+.+++-..+..|.|..+..+.
T Consensus 27 ~~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 27 FSSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHH
T ss_pred EEEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccc
Confidence 3455677777777888888887754444444432 25777888865444444456689998887332
Q ss_pred ---eeEEeccc-----ccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccccCCCcc----cccc---cc
Q 019326 244 ---VAYCIEDA-----HSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIKEKPLPL----AEAK---TN 308 (343)
Q Consensus 244 ---~~~~~~~~-----h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~----~~~~---~~ 308 (343)
..+.+.-+ ...+|..+.|+|.+. ++..|++-..|+.||+||+.... ..|..+ ..+. ..
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~------~ds~LVVLtsD~~Ir~yDl~~s~-~~P~~L~k~~~~fg~d~~~ 179 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSY------RDSCIVVLKEDDTITMFDILNSQ-EKPIVLNKPNNSFGLDARV 179 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBG------GGCEEEEEETTSCEEEEETTCTT-SCCEEESCCCSEEESCSSC
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccC------CCCeEEEEecCCEEEEEEcccCC-CCCcchhccccccCCCccc
Confidence 12233311 256799999999864 33489999999999999998732 121111 0111 11
Q ss_pred cceeEEEcCCCCceecc
Q 019326 309 SRLTCLAGSSTKSFKRP 325 (343)
Q Consensus 309 ~~i~~~~~s~~~~~~~~ 325 (343)
..|.+++|++++..+..
T Consensus 180 ~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 180 NDITDLEFSKDGLTLYC 196 (452)
T ss_dssp CCEEEEEECTTSSCEEE
T ss_pred ceEEEEEEcCCCcEEEE
Confidence 45888999987665544
No 334
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.65 E-value=0.1 Score=39.63 Aligned_cols=134 Identities=12% Similarity=-0.028 Sum_probs=79.8
Q ss_pred ceEEEeeCCCeEEEEECCCcce-----eeeeeec--cccEEEEEEecCCCEEEEEeCCCeEEEEEccCCcee------EE
Q 019326 101 RNLFSTSADGFVSIFDADPFVL-----LTSVKVH--KKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRS------FY 167 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~--~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~------~~ 167 (343)
..|+....| +++.=....... ..+..+. =..+..++|+|++.+.++ .+|.++-.+..+.... ..
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~ 81 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKK 81 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccE
Confidence 467777777 666554433321 1111222 236779999998886655 7787766665442211 11
Q ss_pred EEc-C-CcceEEEEeCCCCEEEEEeCCcEEEEEcccceeE------EEec--CCcceEEeeecCCCeEEEEeCCCcEEEE
Q 019326 168 HKI-G-KEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLL------CELD--GKKRILCAAPGENGVLFTGGEDRSITAW 237 (343)
Q Consensus 168 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------~~~~--~~~~i~~~~~~~~~~l~~~~~dg~i~i~ 237 (343)
+.. . ..-..+.|.|++.+.++ .|+.|.-++..+.... ..+. .=..+..+.+.++..|.+.. |+.++-.
T Consensus 82 IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~ 159 (236)
T 1tl2_A 82 IGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKA 159 (236)
T ss_dssp EECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred ecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEec
Confidence 110 0 11477899999999888 7898887776432111 1111 12467888888888888887 8886544
Q ss_pred EC
Q 019326 238 DT 239 (343)
Q Consensus 238 d~ 239 (343)
..
T Consensus 160 ~~ 161 (236)
T 1tl2_A 160 LP 161 (236)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 335
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.48 E-value=0.33 Score=41.08 Aligned_cols=215 Identities=8% Similarity=0.092 Sum_probs=129.5
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCC-eeeeEeccCC---C
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTS-SSLGAIHHHE---S 83 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~---~ 83 (343)
...+.|||++. ...+..+.- ..+|.-=.|- .+.|+-.+. ..|.-|++... .+...|..|. .
T Consensus 85 g~~lQiFnle~------------K~klks~~~-~e~VvfWkWis~~~l~lVT~-taVyHWsi~~~s~P~kvFdR~~~L~~ 150 (494)
T 1bpo_A 85 GKTLQIFNIEM------------KSKMKAHTM-TDDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAG 150 (494)
T ss_dssp TTEEEEEETTT------------TEEEEEEEC-SSCCCEEEEEETTEEEEECS-SEEEEEESSSSCCCEEEEECCGGGTT
T ss_pred CCeEEEEchHH------------hhhhcceec-CCCceEEEecCCCeEEEEcC-CeeEEecccCCCCchhheecchhccc
Confidence 56788888876 233333332 3456666666 666666654 56999999743 4555554431 3
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeC-------CCeEEEEECCCcceeeeeeeccccEEEEEEecCC---CEEEEEeCC--
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSA-------DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSG---KLALTVGRD-- 151 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~---~~l~~~~~d-- 151 (343)
..|..-..+++. ++++..+- .|.+.+|..+. +.-+.+.+|...-..+....+. ..++.+...
T Consensus 151 ~QIInY~~d~~~-----kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 224 (494)
T 1bpo_A 151 CQIINYRTDAKQ-----KWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (494)
T ss_dssp CEEEEEEECTTS-----SEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTT
T ss_pred ceEEEEEECCCC-----CeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 566667777777 56553332 47788999876 4566777777655444433221 233434332
Q ss_pred -CeEEEEEccCC---c-----eeEEEEc-----CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceE
Q 019326 152 -DCLAMVNLVRG---R-----RSFYHKI-----GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRIL 215 (343)
Q Consensus 152 -~~i~~wd~~~~---~-----~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~ 215 (343)
+.+.+.++... . ....... .+.+-.+..++.-..++.. .-|.+.+||+.++.++..-+ ...+|.
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF 304 (494)
T 1bpo_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF 304 (494)
T ss_dssp CCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceE
Confidence 78889888543 1 1111111 2345678888887777777 89999999999999988766 444444
Q ss_pred Eeeec-CCCeEEEEeCCCcEEEEECCCCc
Q 019326 216 CAAPG-ENGVLFTGGEDRSITAWDTNSGK 243 (343)
Q Consensus 216 ~~~~~-~~~~l~~~~~dg~i~i~d~~~~~ 243 (343)
..+.. ..+=++.-...|.|.--.+....
T Consensus 305 ~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 305 VTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred EecccCCCCcEEEEccCceEEEEEEcccc
Confidence 44443 23334444466766665555443
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.41 E-value=0.036 Score=42.04 Aligned_cols=132 Identities=9% Similarity=0.035 Sum_probs=75.5
Q ss_pred CCEEEEEeCCCeEEEEEccCCc------eeEEEEcC--CcceEEEEeCCCCEEEEEeCCcEEEEEccccee------EEE
Q 019326 142 GKLALTVGRDDCLAMVNLVRGR------RSFYHKIG--KEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKL------LCE 207 (343)
Q Consensus 142 ~~~l~~~~~d~~i~~wd~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~------~~~ 207 (343)
..+|+....| +++.=....+. ........ ..+..++|+|++.+.++ .++.+.-.+..+... -..
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~ 81 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKK 81 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccE
Confidence 3456666666 55443333332 11222221 46778999999997777 888877777654211 122
Q ss_pred ec--CCcceEEeeecCCCeEEEEeCCCcEEEEECCCCcee------EEecccccccEEEEEEEecCCCCCCCCCCeEEEE
Q 019326 208 LD--GKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVA------YCIEDAHSARVKGIVVLTKNDGGSTAENPYLVAS 279 (343)
Q Consensus 208 ~~--~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~------~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s 279 (343)
+. .-....++.|.++..|+++ .||.|+-++..+...- ..+-..-=..+..|.+.|++. |.+
T Consensus 82 IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~----------Lya 150 (236)
T 1tl2_A 82 IGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY----------LYA 150 (236)
T ss_dssp EECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC----------EEE
T ss_pred ecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce----------EEE
Confidence 21 1112467778766777766 6699988876432211 111101114678999999984 666
Q ss_pred EcCCCcEE
Q 019326 280 ASSDGVIC 287 (343)
Q Consensus 280 ~~~dg~i~ 287 (343)
.. |+.++
T Consensus 151 v~-dg~ly 157 (236)
T 1tl2_A 151 VH-GQQFY 157 (236)
T ss_dssp EE-TTEEE
T ss_pred Ee-CCcEE
Confidence 66 88754
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.35 E-value=0.6 Score=45.81 Aligned_cols=216 Identities=12% Similarity=0.102 Sum_probs=126.3
Q ss_pred CCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC-cceeeeeeec----cccEE
Q 019326 60 TDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP-FVLLTSVKVH----KKGVN 134 (343)
Q Consensus 60 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~----~~~v~ 134 (343)
...++.|+|+++...+..+.-. .+|.-=.|-... .|+-.+ +..|+-|++.. ..++..+..| ...|.
T Consensus 84 ag~~lQiFnl~~k~klks~~~~--e~VvfWkWis~~------~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIi 154 (1630)
T 1xi4_A 84 AGKTLQIFNIEMKSKMKAHTMT--DDVTFWKWISLN------TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQII 154 (1630)
T ss_pred cCCeEEEeehHHhhhhcccccC--CCceEEEecCCC------eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeE
Confidence 3688999999988887777655 567777777655 455444 34799999963 3455555544 34777
Q ss_pred EEEEecCCCEEEEEeC-------CCeEEEEEccCCceeEEEEcCCcceEEEEe---CCCCEEEEEe----CCcEEEEEcc
Q 019326 135 DLAVHHSGKLALTVGR-------DDCLAMVNLVRGRRSFYHKIGKEASLIKFD---GSGEKFFMVT----EEKVGIHQAE 200 (343)
Q Consensus 135 ~i~~~~~~~~l~~~~~-------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~i~~~d~~ 200 (343)
.-..+++.++++..|- .|.+.+|..+.+.......+......+.+. +....++.+. .+++.+.++.
T Consensus 155 nY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~ 234 (1630)
T 1xi4_A 155 NYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVG 234 (1630)
T ss_pred EeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecC
Confidence 7788888888776553 477888887665432222111111111111 1122333332 3678888774
Q ss_pred cc---e-eEE----Ee--cC---CcceEEeeecC-CCeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCC
Q 019326 201 DA---K-LLC----EL--DG---KKRILCAAPGE-NGVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 201 ~~---~-~~~----~~--~~---~~~i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
.. . ... .+ +. ..-..++..++ .+.++.-+.-|.|++||+.++.++..-+ -...+|...+......
T Consensus 235 ~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r-is~~~iF~~~~~~~~~ 313 (1630)
T 1xi4_A 235 TPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR-ISGETIFVTAPHEATA 313 (1630)
T ss_pred CCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc-ccCCceEEeccCCCCC
Confidence 32 1 110 00 11 12233455553 4678888899999999999999887655 4445554444333222
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 267 GGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 267 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
=++.....|.|.--.++..
T Consensus 314 ---------g~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 314 ---------GIIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred ---------ceEEEcCCceEEEEEEccc
Confidence 2444456676666666543
No 338
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.06 E-value=0.51 Score=39.08 Aligned_cols=218 Identities=10% Similarity=0.048 Sum_probs=114.5
Q ss_pred CCeEEEEec--CceEEEeeCCCeEEEEEcCCCeeeeE---e----ccCCCCCeEEEEEeCC---CCCCCCceEEEeeC--
Q 019326 43 SPITTVAVS--GTAAASGGTDDTIHLYDLSTSSSLGA---I----HHHESSSVTSLAFYTP---QNLSVPRNLFSTSA-- 108 (343)
Q Consensus 43 ~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~---~----~~~~~~~v~~l~~~~~---~~~~~~~~l~s~~~-- 108 (343)
.....|+|. ++.|+.+...|.|++++.+ ++.... + ... ......|+++|+ +. .+.++-..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g-~~g~~gia~~pdf~~~g----~lYv~~~~~~ 91 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHG-QGGLLDVVLAPDFAQSR----RIWLSYSEVG 91 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCST-TCSEEEEEECTTHHHHC----EEEEEEEEEC
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCC-CCCceeEEECCCCCCCC----EEEEEEeCCC
Confidence 346788998 5526666778999999854 332211 1 112 356789999995 31 33333222
Q ss_pred -----CCeEEEEECCCc--c--eeee-eee------ccccEEEEEEecCCCEEEEEeC-------------CCeEEEEEc
Q 019326 109 -----DGFVSIFDADPF--V--LLTS-VKV------HKKGVNDLAVHHSGKLALTVGR-------------DDCLAMVNL 159 (343)
Q Consensus 109 -----dg~i~iwd~~~~--~--~~~~-~~~------~~~~v~~i~~~~~~~~l~~~~~-------------d~~i~~wd~ 159 (343)
...|..|++... + .... +.. .......|+|.|+|.+.++.+. .|.|.-++.
T Consensus 92 ~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~ 171 (353)
T 2g8s_A 92 DDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTD 171 (353)
T ss_dssp SSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEET
T ss_pred CCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECC
Confidence 235666666432 1 1111 111 0112357999999976666543 246766666
Q ss_pred cCCc------------eeEEEEcC-CcceEEEEeCCCCEEEEE-eC--CcEEEEEcccce--------------------
Q 019326 160 VRGR------------RSFYHKIG-KEASLIKFDGSGEKFFMV-TE--EKVGIHQAEDAK-------------------- 203 (343)
Q Consensus 160 ~~~~------------~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~--~~i~~~d~~~~~-------------------- 203 (343)
...- ........ .....++|+|....++++ .. +.=.+.-+..+.
T Consensus 172 dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~ 251 (353)
T 2g8s_A 172 QGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPE 251 (353)
T ss_dssp TSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTT
T ss_pred CCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCc
Confidence 4320 11122222 346779999944445554 22 111222111111
Q ss_pred -----------eEEEecCCcceEEeeec--------CCCeEEEEeCCCcEEEEECCCCceeEE--ecccccccEEEEEEE
Q 019326 204 -----------LLCELDGKKRILCAAPG--------ENGVLFTGGEDRSITAWDTNSGKVAYC--IEDAHSARVKGIVVL 262 (343)
Q Consensus 204 -----------~~~~~~~~~~i~~~~~~--------~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~h~~~v~~~~~~ 262 (343)
+...+.+......+.+. .+.++++.-..+.|...++..++.... +.......+..+++.
T Consensus 252 ~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~ 331 (353)
T 2g8s_A 252 AKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTG 331 (353)
T ss_dssp CCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEEC
T ss_pred ccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEEC
Confidence 11122233345566664 245666666778888888876544332 211223478889988
Q ss_pred ecCC
Q 019326 263 TKND 266 (343)
Q Consensus 263 ~~~~ 266 (343)
|++.
T Consensus 332 pdG~ 335 (353)
T 2g8s_A 332 PDGY 335 (353)
T ss_dssp TTSC
T ss_pred CCCc
Confidence 8875
No 339
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.72 E-value=0.72 Score=38.13 Aligned_cols=183 Identities=14% Similarity=0.095 Sum_probs=104.6
Q ss_pred CCCeEEEEEcCCC--eee-eEecc-----CCCCCeEEEEEeCC--CCCCCCceEEEe-eC--CCeEEEEECCCcc----e
Q 019326 60 TDDTIHLYDLSTS--SSL-GAIHH-----HESSSVTSLAFYTP--QNLSVPRNLFST-SA--DGFVSIFDADPFV----L 122 (343)
Q Consensus 60 ~dg~i~iwd~~~~--~~~-~~~~~-----~~~~~v~~l~~~~~--~~~~~~~~l~s~-~~--dg~i~iwd~~~~~----~ 122 (343)
.+|.|.++|.++. +.. -.+.+ . .-....+.+.++ +. .+|+.+ .. +.+|.+|+++... .
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~-~f~PhGi~~~~d~dg~----~~L~Vvnh~~~~s~ielf~~d~~~~~~~~ 155 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDIS-SFNPHGISTFIDDDNT----VYLLVVNHPGSSSTVEVFKFQEEEKSLLH 155 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGG-GCCEEEEEEEECTTCC----EEEEEEECSTTCCEEEEEEEETTTTEEEE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcC-ceeeeeeEEEECCCCc----EEEEEEECCCCCCeEEEEEEECCCCEEEE
Confidence 6899999998742 211 11221 1 246777887663 31 234444 33 4678888775432 2
Q ss_pred eeeeeec-cccEEEEEEecCCCEEEEEeC-----------------CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCC
Q 019326 123 LTSVKVH-KKGVNDLAVHHSGKLALTVGR-----------------DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGE 184 (343)
Q Consensus 123 ~~~~~~~-~~~v~~i~~~~~~~~l~~~~~-----------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (343)
+..+.+. -...+++.+.++|.+.++... .|.|..+|. ++.......-...+.++|+|+++
T Consensus 156 ~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~ 233 (355)
T 3sre_A 156 LKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGK 233 (355)
T ss_dssp EEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSS
T ss_pred EeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCC
Confidence 2333322 136789999999987776541 244555554 33322233335678899999999
Q ss_pred EEEEE--eCCcEEEEEccc-cee--EEEecCCcceEEeeecC--CCeEEEEeCC-CcEEEEECC--CCceeEEec
Q 019326 185 KFFMV--TEEKVGIHQAED-AKL--LCELDGKKRILCAAPGE--NGVLFTGGED-RSITAWDTN--SGKVAYCIE 249 (343)
Q Consensus 185 ~~~~~--~~~~i~~~d~~~-~~~--~~~~~~~~~i~~~~~~~--~~~l~~~~~d-g~i~i~d~~--~~~~~~~~~ 249 (343)
.++++ ..+.|..|++.. ++. .+.+......-.++... +++.+++..+ +.|..|+.. .+..+.++.
T Consensus 234 ~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 234 YVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred EEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEEE
Confidence 98888 578899999863 322 22333445566777764 4444444433 345555544 244444444
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.59 E-value=0.79 Score=37.74 Aligned_cols=227 Identities=13% Similarity=0.061 Sum_probs=120.3
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCccee--eee----eeccccEEEEEEecC---CCEEEEE---eC
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLL--TSV----KVHKKGVNDLAVHHS---GKLALTV---GR 150 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~----~~~~~~v~~i~~~~~---~~~l~~~---~~ 150 (343)
-.....|+|.|++ .++++--..|.|++++..+++.. ..+ .........|+++|+ +..|+.. ..
T Consensus 31 L~~P~~ia~~pdG-----~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 31 LNSPWGLAPLPGG-----DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp CSSEEEEEECTTS-----CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred CCCceEEEEcCCC-----cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 4677899999998 55555444899999987654432 111 122457889999995 3344432 24
Q ss_pred CCeEEEEEccCC---------ceeEEEEc----CCcceEEEEeCCCCEEEEEeC--------------CcEEEEEcccc-
Q 019326 151 DDCLAMVNLVRG---------RRSFYHKI----GKEASLIKFDGSGEKFFMVTE--------------EKVGIHQAEDA- 202 (343)
Q Consensus 151 d~~i~~wd~~~~---------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--------------~~i~~~d~~~~- 202 (343)
++.|.-|.+..+ ........ .+....+.|.|++.++++..+ +.|.-++....
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 556666766542 11111112 244566999999987776532 33444443321
Q ss_pred --------eeEEEecCCcceEEeeecCCCeEEEEeC--CCcEEEEECCCC------------------ceeEEecccccc
Q 019326 203 --------KLLCELDGKKRILCAAPGENGVLFTGGE--DRSITAWDTNSG------------------KVAYCIEDAHSA 254 (343)
Q Consensus 203 --------~~~~~~~~~~~i~~~~~~~~~~l~~~~~--dg~i~i~d~~~~------------------~~~~~~~~~h~~ 254 (343)
..+....+ .....++|++...|+++.. ++.=.|--+..+ .++..+. .+..
T Consensus 186 p~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~-~~~~ 263 (347)
T 3das_A 186 APGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWS-TDEA 263 (347)
T ss_dssp CTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEEC-TTTC
T ss_pred cCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecC-CCCC
Confidence 01111112 2234566664444444432 221122111111 1233333 2224
Q ss_pred cEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCccc-cCCCcccccccccceeEEEcCCCCceecccc
Q 019326 255 RVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMAIK-EKPLPLAEAKTNSRLTCLAGSSTKSFKRPQI 327 (343)
Q Consensus 255 ~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~ 327 (343)
....++|... . ++...-..+.|....+..... .....+.. ....++..++..||+.+.+...
T Consensus 264 ap~G~~~~~g-~---------~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~-~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 264 SPSGIAYAEG-S---------VWMAGLRGERLWRIPLKGTAAAADPQAFLE-GEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp CEEEEEEETT-E---------EEEEESTTCSEEEEEEETTEESSCCEEEST-TTSSCEEEEEEEETTEEEEEEC
T ss_pred CCcceEEEcC-c---------eeeccccCCEEEEEEecCCceecceEEeec-CCCCCccEEEECCCCcEEEEEc
Confidence 6677887642 2 566655566776667765431 11111111 1346899999999998877654
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.36 E-value=1.6 Score=39.87 Aligned_cols=154 Identities=12% Similarity=0.053 Sum_probs=82.1
Q ss_pred eEEEEe--cCceEEEeeCC------CeEEEEEcCCCeeee--EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC--eE
Q 019326 45 ITTVAV--SGTAAASGGTD------DTIHLYDLSTSSSLG--AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG--FV 112 (343)
Q Consensus 45 v~~l~~--~~~~l~s~~~d------g~i~iwd~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg--~i 112 (343)
-.++.+ .+..++.|+.+ ..+.+||..+.+-.. .+... ... .+.+...++ ..++.|+.++ .+
T Consensus 443 hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~-R~~-h~~~~~~~~-----~iyv~GG~~~~~~v 515 (695)
T 2zwa_A 443 HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT-RFR-HSACSLPDG-----NVLILGGVTEGPAM 515 (695)
T ss_dssp CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC-CBS-CEEEECTTS-----CEEEECCBCSSCSE
T ss_pred eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC-ccc-ceEEEEcCC-----EEEEECCCCCCCCE
Confidence 345556 56677777654 357889988754322 22211 111 223332355 6788888755 68
Q ss_pred EEEECCCcce--eee---eeeccccEEEEEEecC-CCEEEEEeC--C-----CeEEEEEccCCc------eeEEEEc---
Q 019326 113 SIFDADPFVL--LTS---VKVHKKGVNDLAVHHS-GKLALTVGR--D-----DCLAMVNLVRGR------RSFYHKI--- 170 (343)
Q Consensus 113 ~iwd~~~~~~--~~~---~~~~~~~v~~i~~~~~-~~~l~~~~~--d-----~~i~~wd~~~~~------~~~~~~~--- 170 (343)
.+||..+.+- +.. +........++.+..+ ++.++.|+. + +.+..||+.+.. -......
T Consensus 516 ~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~ 595 (695)
T 2zwa_A 516 LLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLF 595 (695)
T ss_dssp EEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGG
T ss_pred EEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCC
Confidence 9999876432 111 1111112233455555 567777765 2 468899998877 2222221
Q ss_pred CCcceEEEEeCCCCEEEEE-e--------CCcEEEEEcccceeE
Q 019326 171 GKEASLIKFDGSGEKFFMV-T--------EEKVGIHQAEDAKLL 205 (343)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~-~--------~~~i~~~d~~~~~~~ 205 (343)
+..-..+....++..++.+ . ...+.+||+.+.+-.
T Consensus 596 ~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 596 QRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp CCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred CcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 1122233333335555555 2 245888998876544
No 342
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.18 E-value=1.9 Score=39.49 Aligned_cols=188 Identities=12% Similarity=0.072 Sum_probs=102.1
Q ss_pred ecCceEEEeeCC----CeEEEEEcCCCeeeeEe-c-----cCCCCCeEEEEEeC-CCCCCCCceEEEeeCC------CeE
Q 019326 50 VSGTAAASGGTD----DTIHLYDLSTSSSLGAI-H-----HHESSSVTSLAFYT-PQNLSVPRNLFSTSAD------GFV 112 (343)
Q Consensus 50 ~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~-~-----~~~~~~v~~l~~~~-~~~~~~~~~l~s~~~d------g~i 112 (343)
..+..++.|+.+ ..+.+||..+++-...- . ......-.+++..+ ++ ..++.|+.+ ..+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-----~lyv~GG~~~~~~~~~dv 470 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNN-----QLLLIGGRKAPHQGLSDN 470 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTT-----EEEEECCBSSTTCBCCCC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCC-----EEEEEcCCCCCCCccccE
Confidence 446677777753 45888998877543322 1 11011123344443 55 577777754 357
Q ss_pred EEEECCCc--ceeeeeeeccccEEEEEEecCCCEEEEEeCCC--eEEEEEccCCceeEEEE---cC---CcceEEEEeCC
Q 019326 113 SIFDADPF--VLLTSVKVHKKGVNDLAVHHSGKLALTVGRDD--CLAMVNLVRGRRSFYHK---IG---KEASLIKFDGS 182 (343)
Q Consensus 113 ~iwd~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~---~~---~~~~~~~~~~~ 182 (343)
.+||..+. +.+..+......- +.+...+++.++.|+.++ .+.+||..+..-..... .+ .....+.+..+
T Consensus 471 ~~yd~~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~ 549 (695)
T 2zwa_A 471 WIFDMKTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPV 549 (695)
T ss_dssp EEEETTTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETT
T ss_pred EEEeCCCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCC
Confidence 88998763 3332222111121 222323778888887654 68999998876433322 11 11233555655
Q ss_pred -CCEEEEE-e--C-----CcEEEEEccccee-----EEEec-----CCcceEEeeecCCCeEEEEeC--------CCcEE
Q 019326 183 -GEKFFMV-T--E-----EKVGIHQAEDAKL-----LCELD-----GKKRILCAAPGENGVLFTGGE--------DRSIT 235 (343)
Q Consensus 183 -~~~~~~~-~--~-----~~i~~~d~~~~~~-----~~~~~-----~~~~i~~~~~~~~~~l~~~~~--------dg~i~ 235 (343)
+..++.+ . + +.+.+||+.+... ...+. ......++.+.++.+++.|+. ...+.
T Consensus 550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 550 SKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSII 629 (695)
T ss_dssp TTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEE
T ss_pred CCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEE
Confidence 5555555 2 2 3588999887761 22221 122223333423677777774 34589
Q ss_pred EEECCCCc
Q 019326 236 AWDTNSGK 243 (343)
Q Consensus 236 i~d~~~~~ 243 (343)
+||+.+.+
T Consensus 630 ~yd~~t~~ 637 (695)
T 2zwa_A 630 SLDPLSET 637 (695)
T ss_dssp EEETTTTE
T ss_pred EEECCCCe
Confidence 99998765
No 343
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.10 E-value=1.8 Score=42.70 Aligned_cols=193 Identities=9% Similarity=0.107 Sum_probs=105.0
Q ss_pred CCeEEEEec-CceEEEeeCCCeEEEEEcCCC-eeeeEeccCC---CCCeEEEEEeCCCCCCCCceEEEee-------CCC
Q 019326 43 SPITTVAVS-GTAAASGGTDDTIHLYDLSTS-SSLGAIHHHE---SSSVTSLAFYTPQNLSVPRNLFSTS-------ADG 110 (343)
Q Consensus 43 ~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~---~~~v~~l~~~~~~~~~~~~~l~s~~-------~dg 110 (343)
.+|.-=.|- .+.|+-.+. ..|.-|++... .+...|..|. ...|..-..+++. ++++..+ -.|
T Consensus 106 e~VvfWkWis~~~l~lVT~-~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~-----kW~~l~gi~~~~~~v~G 179 (1630)
T 1xi4_A 106 DDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQ-----KWLLLTGISAQQNRVVG 179 (1630)
T ss_pred CCceEEEecCCCeeEEEcC-CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCC-----CeEEEEeeccCCCcccc
Confidence 456655665 566665553 56999999742 3444443331 3456666667776 5555333 357
Q ss_pred eEEEEECCCcceeeeeeeccccEEEEEEe--cCC-CEEEEEeC---CCeEEEEEccCC---ceeEE-----EEc-----C
Q 019326 111 FVSIFDADPFVLLTSVKVHKKGVNDLAVH--HSG-KLALTVGR---DDCLAMVNLVRG---RRSFY-----HKI-----G 171 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~~~~~v~~i~~~--~~~-~~l~~~~~---d~~i~~wd~~~~---~~~~~-----~~~-----~ 171 (343)
.+.+|..+. +.-+.+.+|.+.-..+... +.. ..++.+.. .+.+.+.++... ..... ... .
T Consensus 180 ~mQLyS~er-~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~ 258 (1630)
T 1xi4_A 180 AMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQN 258 (1630)
T ss_pred eeeeeeccc-ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccccc
Confidence 889998866 3445566665543333332 111 22222222 267888887543 11110 111 2
Q ss_pred CcceEEEEeCCCCEEEEE-eCCcEEEEEcccceeEEEec-CCcceEEeeec-CCCeEEEEeCCCcEEEEECCCC
Q 019326 172 KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAKLLCELD-GKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSG 242 (343)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~ 242 (343)
..+..+..++.-..+... .-|.+.+||+.++.++..-+ ...+|...+.. +.+-++.....|.|.--.+...
T Consensus 259 Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred CcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccc
Confidence 334557777766666666 89999999999998876655 33334333333 2222333335555555444433
No 344
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.95 E-value=1.3 Score=36.48 Aligned_cols=223 Identities=12% Similarity=0.077 Sum_probs=120.8
Q ss_pred EecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCCee--eeEe----ccCCCCCeEEEEEeCC---CCCCCCceEEE
Q 019326 37 SYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTSSS--LGAI----HHHESSSVTSLAFYTP---QNLSVPRNLFS 105 (343)
Q Consensus 37 ~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~--~~~~----~~~~~~~v~~l~~~~~---~~~~~~~~l~s 105 (343)
.+...-.....|+|. |.++++--..|.|++++..+++. +..+ ... ......|+++|+ + ..|..
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g-~~GllGia~~Pdf~~~-----g~lYv 99 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSG-EGGLLGIALSPDYASD-----HMVYA 99 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBT-TBSEEEEEECTTHHHH-----CEEEE
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecC-CCCceeeEeccccccC-----CEEEE
Confidence 333445567899997 55555544489999998765543 2212 122 467899999985 2 24443
Q ss_pred e---eCCCeEEEEECCCc----------cee-eeeee-ccccEEEEEEecCCCEEEEEeC-------------CCeEEEE
Q 019326 106 T---SADGFVSIFDADPF----------VLL-TSVKV-HKKGVNDLAVHHSGKLALTVGR-------------DDCLAMV 157 (343)
Q Consensus 106 ~---~~dg~i~iwd~~~~----------~~~-~~~~~-~~~~v~~i~~~~~~~~l~~~~~-------------d~~i~~w 157 (343)
. ..++.|.-|.+... +.+ ..+.. ....-..|+|.|+|.+.++.+. .|.|.-.
T Consensus 100 ~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi 179 (347)
T 3das_A 100 YFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRM 179 (347)
T ss_dssp EEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEE
T ss_pred EEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEE
Confidence 2 23456666665441 111 11211 1113456999999987777653 2444444
Q ss_pred EccCCc-------eeEEEEcC-CcceEEEEeCCCCEEEEE--eCCcEEEEEcccce------------------eEEEec
Q 019326 158 NLVRGR-------RSFYHKIG-KEASLIKFDGSGEKFFMV--TEEKVGIHQAEDAK------------------LLCELD 209 (343)
Q Consensus 158 d~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~------------------~~~~~~ 209 (343)
+....- ........ .....++|+|++.++++- .++.-.+.-+..+. ++..+.
T Consensus 180 ~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~ 259 (347)
T 3das_A 180 TPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWS 259 (347)
T ss_dssp CTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEEC
T ss_pred eCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecC
Confidence 443210 01122222 345679999987766555 23222332222221 122222
Q ss_pred CC-cceEEeeecCCCeEEEEeCCCcEEEEECCCCce----eEEecccccccEEEEEEEecCC
Q 019326 210 GK-KRILCAAPGENGVLFTGGEDRSITAWDTNSGKV----AYCIEDAHSARVKGIVVLTKND 266 (343)
Q Consensus 210 ~~-~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~h~~~v~~~~~~~~~~ 266 (343)
+. .....++|..+.++...-..+.|....+..... ...+. +....+..|+..|++.
T Consensus 260 ~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~-~~~gR~~dv~~~pDG~ 320 (347)
T 3das_A 260 TDEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLE-GEYGRLRTVAPAGGDK 320 (347)
T ss_dssp TTTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEEST-TTSSCEEEEEEEETTE
T ss_pred CCCCCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeec-CCCCCccEEEECCCCc
Confidence 22 355667776666666666667777777654432 22233 4446788999888875
No 345
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.85 E-value=1.2 Score=35.53 Aligned_cols=204 Identities=15% Similarity=0.054 Sum_probs=107.5
Q ss_pred CCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecC-ceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeE
Q 019326 9 EKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSG-TAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVT 87 (343)
Q Consensus 9 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 87 (343)
||.|+.|-....... - .+. .....|..++... ..++. . ||.|..|-....-.+..-..- ...|.
T Consensus 41 ~G~v~~wG~n~~Gql-------g-~p~----~~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~-~~~v~ 105 (282)
T 3qhy_B 41 GGKVLGWGANLNGQL-------T-MPA----ATQSGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTVPAEA-RSGVD 105 (282)
T ss_dssp TTEEEEEECCSSSTT-------S-CCG----GGGSCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCCCGGG-SSSEE
T ss_pred CCEEEEEeCCCCCCC-------C-CCc----cCCCCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCCCccc-CCCeE
Confidence 889999876542111 0 011 1123677777773 34444 4 899999976543222211112 35788
Q ss_pred EEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeE-
Q 019326 88 SLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSF- 166 (343)
Q Consensus 88 ~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~- 166 (343)
.++..... .+.-. ||.|+.|-....-.+..-......|..++..... .+.-. ||.++.|-.....++.
T Consensus 106 ~ia~G~~h-------s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gqlg~ 174 (282)
T 3qhy_B 106 AIAAGAWA-------SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQTTV 174 (282)
T ss_dssp EEEEETTE-------EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTSTTSC
T ss_pred EEECcCCE-------EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCCCCC
Confidence 88876553 33344 9999999865422221111123457777665443 23333 7999999765432221
Q ss_pred EEEcCCcceEEEEeCCCCEEEEEeCCcEEEEEcccceeE-EEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCC
Q 019326 167 YHKIGKEASLIKFDGSGEKFFMVTEEKVGIHQAEDAKLL-CELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSG 242 (343)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 242 (343)
.......+..++...... ++. .++.+..|-......+ ...+....|..++......++.. ||.|+.|-....
T Consensus 175 p~~~~~~v~~i~~G~~hs-~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 175 PAEAQSGVDDVAGGIFHS-LAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp CGGGGSSEEEEEECSSEE-EEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE--TTEEEEESTTCC
T ss_pred ceecCCCeEEEEecCCEE-EEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE--CCEEEEecCCCC
Confidence 111123444454433222 333 7888888865432111 11112234666666444444444 999999976543
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.34 E-value=3.9 Score=35.95 Aligned_cols=230 Identities=11% Similarity=0.059 Sum_probs=135.3
Q ss_pred eEEEeeCCCeEEEEEcCCCeeeeEeccCC------------------------CCCeEEEEEeCCCCCCCCceEEEeeC-
Q 019326 54 AAASGGTDDTIHLYDLSTSSSLGAIHHHE------------------------SSSVTSLAFYTPQNLSVPRNLFSTSA- 108 (343)
Q Consensus 54 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------------------~~~v~~l~~~~~~~~~~~~~l~s~~~- 108 (343)
.|.||+..|.|+|+-+.+++.+..+.-.. .+....-.+|....-.++++|+.-..
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 38899999999999999998877663110 11111112221111123467777764
Q ss_pred CCeEEEEECCCcceeeeeeec-cccEEEEEEe--cCCCEEEEEeC-------CCeE------------EEEEccCCceeE
Q 019326 109 DGFVSIFDADPFVLLTSVKVH-KKGVNDLAVH--HSGKLALTVGR-------DDCL------------AMVNLVRGRRSF 166 (343)
Q Consensus 109 dg~i~iwd~~~~~~~~~~~~~-~~~v~~i~~~--~~~~~l~~~~~-------d~~i------------~~wd~~~~~~~~ 166 (343)
+..|...+++.+++-+.+... ...+..++|. |+..+++.++. ||.. ...|..+.+...
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 567888899888877766543 3467788886 67778887775 2221 112334444444
Q ss_pred EEEcCCcceEEEEeCCCCEEEEEeCC----------------cEEEEEccc-------ce-------eEEEec-------
Q 019326 167 YHKIGKEASLIKFDGSGEKFFMVTEE----------------KVGIHQAED-------AK-------LLCELD------- 209 (343)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~i~~~d~~~-------~~-------~~~~~~------- 209 (343)
+...+.....+...+++.+.++.+-+ .+.++++.. ++ -+..+.
T Consensus 232 Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~ 311 (638)
T 3sbq_A 232 QVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGK 311 (638)
T ss_dssp EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTB
T ss_pred EEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccccc
Confidence 44445555556667788877766211 155555431 11 011221
Q ss_pred ---------CCcceEEeeec-CCCeEE-EEeCCCcEEEEECCCC------ce-------eEEecccccccEEEEEEEecC
Q 019326 210 ---------GKKRILCAAPG-ENGVLF-TGGEDRSITAWDTNSG------KV-------AYCIEDAHSARVKGIVVLTKN 265 (343)
Q Consensus 210 ---------~~~~i~~~~~~-~~~~l~-~~~~dg~i~i~d~~~~------~~-------~~~~~~~h~~~v~~~~~~~~~ 265 (343)
-......+..+ ++++++ +|-.+.++.++|+++. +. ..+.+ -.......+|.+++
T Consensus 312 ~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~GlGPlHt~Fd~~G 389 (638)
T 3sbq_A 312 DSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--LGLGPLHTTFDGRG 389 (638)
T ss_dssp CCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--CCSCEEEEEECSSS
T ss_pred CCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--CCCcccEEEECCCC
Confidence 11122233444 455555 4556889999998742 11 22333 34566778888876
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEeccCc
Q 019326 266 DGGSTAENPYLVASASSDGVICVWDVRMA 294 (343)
Q Consensus 266 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 294 (343)
. ...|.-.|..|.-|++...
T Consensus 390 ~---------aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 390 N---------AYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp E---------EEEEETTTTEEEEEEHHHH
T ss_pred c---------eEeeeeecceEEEEeccHH
Confidence 4 6667778999999999864
No 347
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.74 E-value=5.8 Score=34.05 Aligned_cols=59 Identities=12% Similarity=0.058 Sum_probs=39.3
Q ss_pred ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC---------CcceEEEEeCC---CCEEEEE
Q 019326 131 KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG---------KEASLIKFDGS---GEKFFMV 189 (343)
Q Consensus 131 ~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---------~~~~~~~~~~~---~~~~~~~ 189 (343)
...+.|+|.|+|+++++-...+.|++++..+++........ .....++++|+ +..|+++
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 35679999999987776554457888876656543333322 23457999996 6666665
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.42 E-value=12 Score=35.59 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=34.1
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEc
Q 019326 132 GVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKI 170 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 170 (343)
.+.+++..++..++++.+.|+++++|++.+++++.....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 567788888888999999999999999999998877665
No 349
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=87.73 E-value=12 Score=31.98 Aligned_cols=103 Identities=11% Similarity=0.108 Sum_probs=57.2
Q ss_pred CCCeEEEEec--CceEEEeeCC-CeEEEEEcCCCeee--eEecc-----CCCCCeEEEEEeCC---CCCCCCceEEEee-
Q 019326 42 LSPITTVAVS--GTAAASGGTD-DTIHLYDLSTSSSL--GAIHH-----HESSSVTSLAFYTP---QNLSVPRNLFSTS- 107 (343)
Q Consensus 42 ~~~v~~l~~~--~~~l~s~~~d-g~i~iwd~~~~~~~--~~~~~-----~~~~~v~~l~~~~~---~~~~~~~~l~s~~- 107 (343)
-.....|+|. |+++++ ... +.|++++..+++.. ..+.. ........|+|+|+ + ..|....
T Consensus 26 l~~P~~~a~~pdG~l~V~-e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~-----g~lYv~~s 99 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLT-ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNN-----PYIYISGT 99 (454)
T ss_dssp CSSEEEEEECTTSCEEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTS-----CEEEEEEE
T ss_pred CCCceEEEEcCCCcEEEE-EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcC-----CEEEEEEe
Confidence 3456789998 555554 555 47888876555432 22221 01466789999995 3 2444333
Q ss_pred C------------CCeEEEEECCCc-------ceee-eeee-ccccEEEEEEecCCCEEEEEeC
Q 019326 108 A------------DGFVSIFDADPF-------VLLT-SVKV-HKKGVNDLAVHHSGKLALTVGR 150 (343)
Q Consensus 108 ~------------dg~i~iwd~~~~-------~~~~-~~~~-~~~~v~~i~~~~~~~~l~~~~~ 150 (343)
. ...|.-++.... +.+. .+.. .......|+|.|+|.+.++.+.
T Consensus 100 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 100 FKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 2 234555554321 1111 1211 1124688999999987777654
No 350
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=86.12 E-value=14 Score=31.01 Aligned_cols=266 Identities=9% Similarity=0.011 Sum_probs=130.8
Q ss_pred EeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCC-CeEEEEEcCCC-e---------
Q 019326 5 AGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTD-DTIHLYDLSTS-S--------- 73 (343)
Q Consensus 5 ~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~d-g~i~iwd~~~~-~--------- 73 (343)
+-..||.|+.|=.......-.........+..........|..++......+.-..+ +.|..|-.... +
T Consensus 30 al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~ 109 (406)
T 4d9s_A 30 ALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL 109 (406)
T ss_dssp EEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEEEECCGGGTTCSSSCCCE
T ss_pred EEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEEEcCCCCcCCCCCCCCcc
Confidence 344688888886543211000000011122111111234688888775554444455 59999954321 0
Q ss_pred -eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc-ce----------eeeeee-ccccEEEEEEec
Q 019326 74 -SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF-VL----------LTSVKV-HKKGVNDLAVHH 140 (343)
Q Consensus 74 -~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~----------~~~~~~-~~~~v~~i~~~~ 140 (343)
....+.......|..++.-. ...++-..+|.|+.|-.... ++ ...+.. ....|..++...
T Consensus 110 ~~p~~v~~l~~~~i~~ia~G~-------~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~ 182 (406)
T 4d9s_A 110 FTPLPIKALHGIRIKQIACGD-------SHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGA 182 (406)
T ss_dssp EEEEECGGGTTCCEEEEEECS-------SEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECS
T ss_pred ccceEecccCCCCEEEEEECh-------hheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecCC
Confidence 01111222134677777643 35666678999999975321 10 011111 112566666543
Q ss_pred CCCEEEEEeCCCeEEEEEccCCc---------eeEEEEcC----CcceEEEEeCCCCEEEEE-eCCcEEEEEcccc----
Q 019326 141 SGKLALTVGRDDCLAMVNLVRGR---------RSFYHKIG----KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA---- 202 (343)
Q Consensus 141 ~~~~l~~~~~d~~i~~wd~~~~~---------~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~---- 202 (343)
.+.+....+|.|+.|-..... ........ ..+..++ ....+.++. .++.+..|-....
T Consensus 183 --~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va--~G~~ht~~l~~~G~v~~wG~n~~GqlG 258 (406)
T 4d9s_A 183 --EHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVA--CGWRHTISVSYSGALYTYGWSKYGQLG 258 (406)
T ss_dssp --SEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEE--ECSSEEEEEETTCCEEEEECCTTSTTC
T ss_pred --CeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEE--ECCCcEEEEcCCCCEEEeeCCCCCCCC
Confidence 456666789999999643211 11111111 2232232 223333333 7788888754321
Q ss_pred -------eeEEEec--CCcceEEeeecCCCeEEEEeCCCcEEEEECCCC-c----------eeEEecccccccEEEEEEE
Q 019326 203 -------KLLCELD--GKKRILCAAPGENGVLFTGGEDRSITAWDTNSG-K----------VAYCIEDAHSARVKGIVVL 262 (343)
Q Consensus 203 -------~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~----------~~~~~~~~h~~~v~~~~~~ 262 (343)
.....+. ....|..++. .....++-..||.|+.|=.... + ....+.......|..++.-
T Consensus 259 ~g~~~~~~~p~~v~~~~~~~v~~i~~-G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G 337 (406)
T 4d9s_A 259 HGDLEDHLIPHKLEALSNSFISQISG-GWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCG 337 (406)
T ss_dssp SSSCCCEEEEEECGGGTTSCEEEEEE-CSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEEC
T ss_pred CCCCcCccccEEecccCCCCEEEEEe-cCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeC
Confidence 1111121 2234666665 3445555578999999965431 1 1112221233456666543
Q ss_pred ecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 263 TKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 263 ~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
.. +.+.-..||.|..|=...
T Consensus 338 ~~-----------hs~alt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 338 WR-----------HTLAVTERNNVFAWGRGT 357 (406)
T ss_dssp SS-----------EEEEEETTSCEEEEECCT
T ss_pred CC-----------eEEEEeCCCCEEEecCCC
Confidence 33 566667899999997654
No 351
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=85.29 E-value=13 Score=29.80 Aligned_cols=160 Identities=8% Similarity=0.068 Sum_probs=82.2
Q ss_pred CCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeCC--------------CeEEEEEccCCceeEEEEcCCcc
Q 019326 109 DGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGRD--------------DCLAMVNLVRGRRSFYHKIGKEA 174 (343)
Q Consensus 109 dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d--------------~~i~~wd~~~~~~~~~~~~~~~~ 174 (343)
++.|...+.+... ...+... . +--+++++.+|+-+... ..|+..++..++...... .
T Consensus 36 ~~~ly~~~~dg~~-~~~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~--~-- 106 (302)
T 3s25_A 36 NGRLYAMNIDGSN-IHKLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP--D-- 106 (302)
T ss_dssp TTEEEEEETTSCS-CEEEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC--S--
T ss_pred CceEEEEcCCCCC-CEEccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec--C--
Confidence 5566666665433 3333321 1 23457788777766543 357777777665333222 1
Q ss_pred eEEEEeCCCCEEEEEe---CCc--EEEEEcccceeEEEecCCcceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 175 SLIKFDGSGEKFFMVT---EEK--VGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 175 ~~~~~~~~~~~~~~~~---~~~--i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
....++++++.++-.. ++. |...++......+...+.. ..+.+..+.+.++......|...++..+.....+.
T Consensus 107 ~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~ 184 (302)
T 3s25_A 107 PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD 184 (302)
T ss_dssp CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC
T ss_pred CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC
Confidence 1236777888888764 444 4444554333322222322 23344334444555556789998887655433333
Q ss_pred ccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC--CcEEEEeccC
Q 019326 250 DAHSARVKGIVVLTKNDGGSTAENPYLVASASSD--GVICVWDVRM 293 (343)
Q Consensus 250 ~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d--g~i~vwd~~~ 293 (343)
+ ... ..+.|.+. +|+-...+ ..|..-++..
T Consensus 185 -~---~~~-~~~~P~g~---------~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 185 -C---NCY-KPVVLDDT---------NVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp -S---CEE-EEEEEETT---------EEEEEEGGGTTEEEEECSSS
T ss_pred -C---Ccc-ceeeecCC---------EEEEEEcCCCcEEEEEECCC
Confidence 2 112 23557766 66554433 2444445544
No 352
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=85.13 E-value=15 Score=30.55 Aligned_cols=270 Identities=11% Similarity=0.061 Sum_probs=132.6
Q ss_pred eEEeccCCeEEEEEeecCCCCCC-CCcc-eeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCC--------
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSS-DQKT-LTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTS-------- 72 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~-~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~-------- 72 (343)
++.-..||.|+.|=.......-. .... ....++..+. ...|..++......+.-..||.|..|-....
T Consensus 13 ~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~--~~~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~ 90 (389)
T 3kci_A 13 NLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT 90 (389)
T ss_dssp --------CEEEEEECTTSTTSSCSCSEEEEEEECHHHH--HTCEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSS
T ss_pred ceeECCCCeEEEeeCCCCccCCCCcCccccCCEeccccc--CCceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCc
Confidence 34556789999997654221100 0000 0111111111 2245566655666677778999999964321
Q ss_pred ---eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc-c----------eeeeeee-ccccEEEEE
Q 019326 73 ---SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF-V----------LLTSVKV-HKKGVNDLA 137 (343)
Q Consensus 73 ---~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~----------~~~~~~~-~~~~v~~i~ 137 (343)
.....+.......+..++++... ...++-..||.|+.|-.... + ....+.. ....|..++
T Consensus 91 ~~~~~p~~v~~~~~~~~~~v~i~~G~-----~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va 165 (389)
T 3kci_A 91 ESVSTPTLLESIQHVFIKKVAVNSGG-----KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 165 (389)
T ss_dssp CCEEEEEECGGGTTSCEEEEEECTTC-----SEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEE
T ss_pred CCccCCEEcccccCCceeEEEECcCC-----CeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEE
Confidence 11112222213345556665554 56777788999999965321 0 0011111 112566666
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCC-c--------eeEEEEc----CCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc-
Q 019326 138 VHHSGKLALTVGRDDCLAMVNLVRG-R--------RSFYHKI----GKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA- 202 (343)
Q Consensus 138 ~~~~~~~l~~~~~d~~i~~wd~~~~-~--------~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~- 202 (343)
.. ..+.+....+|.|+.|-.... + ....... ...+..++........++. .++.+..|-....
T Consensus 166 ~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~G 243 (389)
T 3kci_A 166 AG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYG 243 (389)
T ss_dssp EC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGG
T ss_pred eC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCC
Confidence 54 346666678999999965321 1 1111111 1234444443322444444 8899999864421
Q ss_pred e----------eEEEec--CCcceEEeeecCCCeEEEEeCCCcEEEEECCCC-----------ceeEEecccccccEEEE
Q 019326 203 K----------LLCELD--GKKRILCAAPGENGVLFTGGEDRSITAWDTNSG-----------KVAYCIEDAHSARVKGI 259 (343)
Q Consensus 203 ~----------~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~-----------~~~~~~~~~h~~~v~~~ 259 (343)
+ ....+. ....|..++. .....++-..+|.|+.|-.... .....+.......|..+
T Consensus 244 qLG~g~~~~~~~p~~v~~~~~~~v~~v~~-G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~i 322 (389)
T 3kci_A 244 KLGRGGSDGCKVPMKIDSLTGLGVVKVEC-GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAI 322 (389)
T ss_dssp TTSSSSCCCEEEEEECGGGTTSCEEEEEE-ETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEE
T ss_pred CCCCCCCCCccccEEecccCCCcEEEEeC-CCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEE
Confidence 1 111122 2234666665 3344445578999999965321 11222221122346666
Q ss_pred EEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 260 VVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
+.... +.+....||.|..|=...
T Consensus 323 a~G~~-----------h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 323 ATGSL-----------HCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EECSS-----------EEEEEETTCCEEEEECCT
T ss_pred EeccC-----------eEEEECCCCCEEEeeCCC
Confidence 54333 566667899999997654
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.10 E-value=13 Score=35.37 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=32.5
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeee
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK 127 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 127 (343)
..+.+++..++. .++++-+.|+++++|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~-----~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTY-----NVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTT-----TEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCC-----cEEEEEECCCEEEEEECCCCCeEeeec
Confidence 356777777776 799999999999999999999887754
No 354
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=83.62 E-value=16 Score=29.63 Aligned_cols=112 Identities=12% Similarity=0.099 Sum_probs=71.8
Q ss_pred CCCeEEEE-ec----CceEEEeeCCCeEEEEEcCCCe-------eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCC
Q 019326 42 LSPITTVA-VS----GTAAASGGTDDTIHLYDLSTSS-------SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSAD 109 (343)
Q Consensus 42 ~~~v~~l~-~~----~~~l~s~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~d 109 (343)
...|.++. .. ..+++..+.+|.++.-.+..-. ..-.+... ..+..+...... ..++..+..
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~--D~lv~~~~~~~~-----d~ill~T~~ 166 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN--DELVGAVLCSAG-----DDLLLVSAN 166 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT--CCEEEEEEECTT-----CEEEEEETT
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC--CEEEEEEEecCC-----CEEEEEECC
Confidence 34455543 32 5689999999999998875422 22233333 556555555444 578888999
Q ss_pred CeEEEEECC--Ccce---------eeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccC
Q 019326 110 GFVSIFDAD--PFVL---------LTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVR 161 (343)
Q Consensus 110 g~i~iwd~~--~~~~---------~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~ 161 (343)
|.+..+... .-.. .-.+. ....|.++...+++..++..+..|.++.-.+..
T Consensus 167 G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 167 GQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp SEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred CeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 998888776 3211 11122 234677776666667899999999999887653
No 355
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=83.60 E-value=16 Score=29.40 Aligned_cols=179 Identities=11% Similarity=0.088 Sum_probs=91.8
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceeE---------EEEcCCcceE-EEEeCCCCEEEEEeCCcEEEEEcc---c------
Q 019326 141 SGKLALTVGRDDCLAMVNLVRGRRSF---------YHKIGKEASL-IKFDGSGEKFFMVTEEKVGIHQAE---D------ 201 (343)
Q Consensus 141 ~~~~l~~~~~d~~i~~wd~~~~~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~d~~---~------ 201 (343)
+..++++.+.+|.|+--.+..-+... .......+.. +..+.....++....|.+.-+... .
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~ 81 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGAR 81 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCC
Confidence 45577888888888776664422111 1112233333 333444445555577776655442 2
Q ss_pred ceeEE---EecCCcceEEeee----cCCCeEEEEeCCCcEEEEECCC-------CceeEEecccccccEEEEEEEecCCC
Q 019326 202 AKLLC---ELDGKKRILCAAP----GENGVLFTGGEDRSITAWDTNS-------GKVAYCIEDAHSARVKGIVVLTKNDG 267 (343)
Q Consensus 202 ~~~~~---~~~~~~~i~~~~~----~~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~ 267 (343)
|.++. .+.....|..+.. .++.+++..+..|.++.-.+.. +.....+. .+ +.+-.+......+
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~-~~-d~lv~~~~~~~~~- 158 (307)
T 1zi0_A 82 GRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLV-DG-DELIGVDLTSGED- 158 (307)
T ss_dssp CEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCC-TT-CCEEEEEEECTTC-
T ss_pred CeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEEC-CC-CEEEEEEEeCCCC-
Confidence 22111 2334445665543 2456788999999999987642 22222333 23 5555555544443
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEeccCccc----cCCCcccccccccceeEEEcCCCCceeccccCCC
Q 019326 268 GSTAENPYLVASASSDGVICVWDVRMAIK----EKPLPLAEAKTNSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 268 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
.++..+.+|.+..++...-.. ...........+..|.++...++...++..+..+
T Consensus 159 --------~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G 217 (307)
T 1zi0_A 159 --------EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNG 217 (307)
T ss_dssp --------EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTS
T ss_pred --------EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCC
Confidence 688888899988888764311 1111222334455677766554444333334433
No 356
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=79.30 E-value=3.5 Score=37.37 Aligned_cols=38 Identities=11% Similarity=0.072 Sum_probs=32.4
Q ss_pred CCeEEEEecCceEEEeeCCCeEEEEEcCCCeeeeEecc
Q 019326 43 SPITTVAVSGTAAASGGTDDTIHLYDLSTSSSLGAIHH 80 (343)
Q Consensus 43 ~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 80 (343)
..|.++.+...++++-+.|.++|+|++.+++++....-
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 35777777788999999999999999999998877654
No 357
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=76.99 E-value=28 Score=28.25 Aligned_cols=226 Identities=8% Similarity=0.026 Sum_probs=120.5
Q ss_pred ceEEEeeCCCeEEEEEcCCC-------eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEE---CCC---
Q 019326 53 TAAASGGTDDTIHLYDLSTS-------SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFD---ADP--- 119 (343)
Q Consensus 53 ~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd---~~~--- 119 (343)
..+++.+.+|.|+--.+.+- +-+..+...+...+..+...... ..|+.-+..|.++-.. +..
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~-----d~ll~fT~~Gr~y~~~~~~lp~~~r 78 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTH-----DLILFFTTQGRVYRAKAYDLPEASR 78 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETT-----SEEEEEETTSEEEEEEGGGSCBCCS
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCC-----CEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 45677788888886654321 11111111112445555444444 4677677777766554 322
Q ss_pred ---cceeee---eeeccccEEEEEEec---CCCEEEEEeCCCeEEEEEccCCcee-------EEEEcCCcceEEEEeCCC
Q 019326 120 ---FVLLTS---VKVHKKGVNDLAVHH---SGKLALTVGRDDCLAMVNLVRGRRS-------FYHKIGKEASLIKFDGSG 183 (343)
Q Consensus 120 ---~~~~~~---~~~~~~~v~~i~~~~---~~~~l~~~~~d~~i~~wd~~~~~~~-------~~~~~~~~~~~~~~~~~~ 183 (343)
|.++.. +. ....|..+...+ +..+++..+.+|.++--.+..-... ....-...+..+......
T Consensus 79 ~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~ 157 (327)
T 3uc1_A 79 TARGQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAG 157 (327)
T ss_dssp SSCCEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTT
T ss_pred cCCCEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCC
Confidence 222111 22 234555554433 4679999999999999887653211 111223444444444444
Q ss_pred CEEEEE-eCCcEEEEEcc--c---------ceeEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCC-------c
Q 019326 184 EKFFMV-TEEKVGIHQAE--D---------AKLLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSG-------K 243 (343)
Q Consensus 184 ~~~~~~-~~~~i~~~d~~--~---------~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~-------~ 243 (343)
..++.. ..|.+..+... . |.....+.....|.++... ++..++..+..|.++.-.+..- +
T Consensus 158 d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~ 237 (327)
T 3uc1_A 158 DDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGK 237 (327)
T ss_dssp CEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred CEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCC
Confidence 444444 88888777665 2 1111223344556666554 4568889999999988775321 1
Q ss_pred eeEEecc-cccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 244 VAYCIED-AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 244 ~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
-+..+.. .-.+.+-.+....... .++..+.+|.+.-++...
T Consensus 238 G~~~~~l~~~~d~lv~~~~~~~~~---------~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 238 GVLTVMYDRRRGRLVGALIVDDDS---------ELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CEESSCCCTTTCSEEEEEEECTTC---------EEEEEEGGGCEEEEEGGG
T ss_pred cEEEEEecCCCCeEEEEEEeCCCc---------cEEEEcCCCeEEEEehhh
Confidence 1222220 1123444444433333 577777788888887764
No 358
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=76.68 E-value=26 Score=27.63 Aligned_cols=194 Identities=9% Similarity=0.021 Sum_probs=107.6
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC---CCcceeeeeeeccccEEEEEEec-CCCEEEEEeCCCeEEEEE
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA---DPFVLLTSVKVHKKGVNDLAVHH-SGKLALTVGRDDCLAMVN 158 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~---~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~d~~i~~wd 158 (343)
.+.+..+...... ..|+.-+..|.++--.. ........+. ....|..+.... +..+++..+.+|.++-..
T Consensus 23 gD~~~~~~~~~t~-----~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~ 96 (276)
T 3no0_A 23 KAPVVNILRVPFT-----EGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIP 96 (276)
T ss_dssp CCCEEEEEEEETT-----SCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEE
T ss_pred CCeEEEEEEECCC-----CEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEE
Confidence 3555555544444 46777777887665433 2111111122 344566654421 467899999999999998
Q ss_pred ccCCc------eeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccce---------eEEEecCCcceEEeeec-C
Q 019326 159 LVRGR------RSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAK---------LLCELDGKKRILCAAPG-E 221 (343)
Q Consensus 159 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~---------~~~~~~~~~~i~~~~~~-~ 221 (343)
+..-. ..........+..+........++.. ..|.+..+....-. ....+.....+..+... +
T Consensus 97 l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~ 176 (276)
T 3no0_A 97 LAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNG 176 (276)
T ss_dssp GGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESS
T ss_pred HHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCC
Confidence 76532 11112223444444444444445444 88888877654311 11223344556555443 5
Q ss_pred CCeEEEEeCCCcEEEEECCC-------CceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEE--Eecc
Q 019326 222 NGVLFTGGEDRSITAWDTNS-------GKVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICV--WDVR 292 (343)
Q Consensus 222 ~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~v--wd~~ 292 (343)
+..++..+..|.++...+.. ++-+..+. ..+.+..+......+ .++..+.+|.+.. +++.
T Consensus 177 ~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~--~~~~lv~~~~~~~~~---------~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 177 EPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG--TKDTLVDLIPIKEEV---------ELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp CSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC--SSSCEEEEEEESSEE---------EEEEEETTSCEEEEEEEGG
T ss_pred CCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc--CCCcEEEEEEeCCCC---------EEEEEcCCCeEEEeeeCHH
Confidence 56888889999998887642 22222232 233444443332222 5777778888888 8776
Q ss_pred C
Q 019326 293 M 293 (343)
Q Consensus 293 ~ 293 (343)
.
T Consensus 246 ~ 246 (276)
T 3no0_A 246 D 246 (276)
T ss_dssp G
T ss_pred H
Confidence 4
No 359
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=76.26 E-value=32 Score=28.58 Aligned_cols=229 Identities=14% Similarity=0.084 Sum_probs=113.4
Q ss_pred EeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec--CceEEEeeCCCeEEEEEcCCC----------
Q 019326 5 AGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS--GTAAASGGTDDTIHLYDLSTS---------- 72 (343)
Q Consensus 5 ~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~---------- 72 (343)
+-..||.|+.|=.......-.........+...-......+..++.. ....+.-..||.|..|-....
T Consensus 67 ~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~ 146 (389)
T 3kci_A 67 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP 146 (389)
T ss_dssp EEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCC
T ss_pred EEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCcc
Confidence 44568999999654321100000001111111111122345555554 566666788999999954321
Q ss_pred -eeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc-ce----------eeeeee-ccccEEEEEEe
Q 019326 73 -SSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF-VL----------LTSVKV-HKKGVNDLAVH 139 (343)
Q Consensus 73 -~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~----------~~~~~~-~~~~v~~i~~~ 139 (343)
.....+.......|..++... ...++...+|.|+.|-.... ++ ...+.. ....|..++..
T Consensus 147 ~~~p~~v~~l~~~~i~~va~G~-------~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 147 CDRPRVIESLRGIEVVDVAAGG-------AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp EEEEEECGGGTTSCEEEEEECS-------SEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CcCCeEecccCCCeEEEEEeCc-------CeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 111122222123677776553 35666678999999975321 10 011111 12356677665
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCc---------eeEEEEcC--CcceEEEEeCCCCEEEEE-eCCcEEEEEcccc-----
Q 019326 140 HSGKLALTVGRDDCLAMVNLVRGR---------RSFYHKIG--KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA----- 202 (343)
Q Consensus 140 ~~~~~l~~~~~d~~i~~wd~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~----- 202 (343)
....+.+....||.|+.|-....- ........ .......+.......++. .++.+..|-....
T Consensus 220 ~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~ 299 (389)
T 3kci_A 220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 299 (389)
T ss_dssp CSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCC
Confidence 433566677789999999653211 11111111 111122222223333333 7888888865321
Q ss_pred ------eeEEEec--CCcceEEeeecCCCeEEEEeCCCcEEEEECCC
Q 019326 203 ------KLLCELD--GKKRILCAAPGENGVLFTGGEDRSITAWDTNS 241 (343)
Q Consensus 203 ------~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~ 241 (343)
.....+. ....|..++. .....++-..||.|+.|-...
T Consensus 300 g~~~~~~~P~~v~~l~~~~v~~ia~-G~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 300 GSDDHVRRPRQVQGLQGKKVIAIAT-GSLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp SSCCCEEEEEECGGGTTCCEEEEEE-CSSEEEEEETTCCEEEEECCT
T ss_pred CCCccccCCeEeccCCCCCEEEEEe-ccCeEEEECCCCCEEEeeCCC
Confidence 0111111 2234666666 344555567899999997653
No 360
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=76.12 E-value=34 Score=28.69 Aligned_cols=232 Identities=9% Similarity=0.046 Sum_probs=119.6
Q ss_pred CCCeEEEEecCceEEEeeCCCeEEEEEcCCC-e----------eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC
Q 019326 42 LSPITTVAVSGTAAASGGTDDTIHLYDLSTS-S----------SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADG 110 (343)
Q Consensus 42 ~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~-~----------~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg 110 (343)
...|..++......+.-..||.|..|=.... + ....+.......|..++.-... .++....++
T Consensus 15 ~~~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~h------t~al~~~gg 88 (406)
T 4d9s_A 15 PRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADH------TVAYSQSGM 88 (406)
T ss_dssp CCCEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSE------EEEEETTTT
T ss_pred ccceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcce------EEEEECCCC
Confidence 4567777777666667778999999964331 1 1112222213467777765433 333333345
Q ss_pred eEEEEECCCc-c-----e---e--eeeee-ccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc---------eeEEEE
Q 019326 111 FVSIFDADPF-V-----L---L--TSVKV-HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR---------RSFYHK 169 (343)
Q Consensus 111 ~i~iwd~~~~-~-----~---~--~~~~~-~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~---------~~~~~~ 169 (343)
.|+.|-.... + . . ..+.. ....|..|+.. ..+.+....+|.|+.|-....- ......
T Consensus 89 ~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G--~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~ 166 (406)
T 4d9s_A 89 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG--DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQK 166 (406)
T ss_dssp EEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEE
T ss_pred EEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC--hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceE
Confidence 9999965321 1 0 0 01111 12256666654 3466666789999999754321 111111
Q ss_pred cC--CcceEEEEeCCCCEEEEE-eCCcEEEEEcccc----------e-eEEEec--CCcceEEeeecCCCeEEEEeCCCc
Q 019326 170 IG--KEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA----------K-LLCELD--GKKRILCAAPGENGVLFTGGEDRS 233 (343)
Q Consensus 170 ~~--~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~----------~-~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~ 233 (343)
.. .......+.....+.++. .++.+..|-.... . ....+. ....+..++. .....++-..+|.
T Consensus 167 v~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~-G~~ht~~l~~~G~ 245 (406)
T 4d9s_A 167 IQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVAC-GWRHTISVSYSGA 245 (406)
T ss_dssp CGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEE-CSSEEEEEETTCC
T ss_pred ecccCCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEE-CCCcEEEEcCCCC
Confidence 11 111223333333444444 7888888854321 0 111111 2245666665 3445555678999
Q ss_pred EEEEECCCCc-----------eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 234 ITAWDTNSGK-----------VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 234 i~i~d~~~~~-----------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
|+.|-....- ....+.......|..++.-.. +.+.-..||.|+.|=...
T Consensus 246 v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~-----------hs~alt~~G~v~~wG~n~ 305 (406)
T 4d9s_A 246 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWR-----------HTMALTSDGKLYGWGWNK 305 (406)
T ss_dssp EEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSS-----------EEEEEETTSCEEEEECCT
T ss_pred EEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEecCC-----------EEEEEcCCCeEEEeeCCC
Confidence 9999654321 112222112234666554332 566667899999996543
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.44 E-value=22 Score=34.69 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=30.1
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcceeeeee
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFVLLTSVK 127 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 127 (343)
.+.+++..++. .++++-+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~-----~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTY-----NVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTT-----TEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCc-----cEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34445555555 689999999999999999999887754
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.10 E-value=14 Score=36.14 Aligned_cols=40 Identities=8% Similarity=0.052 Sum_probs=32.8
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCceeEEEEcC
Q 019326 132 GVNDLAVHHSGKLALTVGRDDCLAMVNLVRGRRSFYHKIG 171 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 171 (343)
.+.+++..++..++++.+.|+++++|++.+++++....+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~ 278 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 278 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechh
Confidence 3455666777889999999999999999999988776653
No 363
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=73.61 E-value=40 Score=28.36 Aligned_cols=262 Identities=9% Similarity=-0.023 Sum_probs=127.0
Q ss_pred eEEEEecCceEEEeeCCCeEEEEEcCC-Ce-----------eeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeE
Q 019326 45 ITTVAVSGTAAASGGTDDTIHLYDLST-SS-----------SLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFV 112 (343)
Q Consensus 45 v~~l~~~~~~l~s~~~dg~i~iwd~~~-~~-----------~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 112 (343)
+..+++....-+.-..||.|..|=... ++ ....+.. -..|..++... ...+.-..||.|
T Consensus 26 ~~~ia~g~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~--l~~v~~va~G~-------~h~~~l~~~G~v 96 (423)
T 3mvd_K 26 RARIAFHLELPKRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAG--IPDAVDISAGG-------MHNLVLTKSGDI 96 (423)
T ss_dssp ---CCCCCCCCCCCCCCEEEEEEEECTTSTTCSCSSCCEEEEEEECCS--CSSEEEEEECS-------SEEEEEETTSCE
T ss_pred eeEEecCCccceeecCCCcEEEEeCCCCCCCCCCCCCccCcCCeEccC--CCCceEEeeCC-------CeEEEEeCCCeE
Confidence 333444444444556778888884332 10 1111122 24566666543 356677889999
Q ss_pred EEEECCC-cc-----------e-eeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEc--cC-Cc--------eeEEE
Q 019326 113 SIFDADP-FV-----------L-LTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNL--VR-GR--------RSFYH 168 (343)
Q Consensus 113 ~iwd~~~-~~-----------~-~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~--~~-~~--------~~~~~ 168 (343)
+.|-... ++ . ...+. ....|..|+... .+.+....||.|+.|-. .. ++ .....
T Consensus 97 ~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~G~--~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~ 173 (423)
T 3mvd_K 97 YSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISAGD--SHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPI 173 (423)
T ss_dssp EEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEECS--SEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEE
T ss_pred EEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEcCc--CeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceee
Confidence 9996532 11 0 01111 223566666543 45566678899999975 22 21 11111
Q ss_pred EcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccce----------------------eEEEe--cCCcceEEeeecCCC
Q 019326 169 KIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDAK----------------------LLCEL--DGKKRILCAAPGENG 223 (343)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~----------------------~~~~~--~~~~~i~~~~~~~~~ 223 (343)
..........+.....+.++. .++.++.|-....- ....+ .....|..++.....
T Consensus 174 ~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~ 253 (423)
T 3mvd_K 174 DLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYC 253 (423)
T ss_dssp ESSTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTE
T ss_pred EecCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECCcE
Confidence 122222223333333444444 78888888543210 00111 123345555554333
Q ss_pred eEEEEeCCCcEEEEECCCCc-----------eeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEecc
Q 019326 224 VLFTGGEDRSITAWDTNSGK-----------VAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVR 292 (343)
Q Consensus 224 ~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 292 (343)
.++.-..+|.|+.|-....- ...... .....|..|+.-.. +.+.-..||.|+.|=..
T Consensus 254 ~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~-~~~~~v~~ia~G~~-----------ht~alt~~G~v~~wG~n 321 (423)
T 3mvd_K 254 TFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIK-TELKDIRHIAGGQH-----------HTVILTTDLKCSVVGRP 321 (423)
T ss_dssp EEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEE-ECCCSEEEEEECSS-----------EEEEEETTCCEEEEECC
T ss_pred EEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEE-cCCCCeEEEEcccC-----------eEEEEeCCCcEEEEECC
Confidence 44444688999999654311 111111 11234555544333 56666789999999654
Q ss_pred Cccc----------cCCCccccccc------ccceeEEEcCCCCceeccccCCC
Q 019326 293 MAIK----------EKPLPLAEAKT------NSRLTCLAGSSTKSFKRPQIGDS 330 (343)
Q Consensus 293 ~~~~----------~~~~~~~~~~~------~~~i~~~~~s~~~~~~~~~~~~~ 330 (343)
.... ..+.++..... -+.-.+++...++.+..|+....
T Consensus 322 ~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~alt~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 322 EYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVN 375 (423)
T ss_dssp GGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEEEETTSCEEEEECCTT
T ss_pred CCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEEEcCCCCEEEECCCCC
Confidence 3210 01111111110 01123466678888888887663
No 364
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=66.57 E-value=54 Score=27.11 Aligned_cols=210 Identities=6% Similarity=-0.060 Sum_probs=99.3
Q ss_pred eeEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec---CceEEEeeCCC----eEEEEEcCCCee
Q 019326 2 SLIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS---GTAAASGGTDD----TIHLYDLSTSSS 74 (343)
Q Consensus 2 ~l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg----~i~iwd~~~~~~ 74 (343)
.|.+|+..| +.+++.... +..+. ..... .....|.+|+++ .+.|+.++..| .|... .+.++.
T Consensus 24 ~l~vgt~~G-l~~~~~~~~------g~~W~--~~~~~-~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~t 92 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPA------RRTWE--LRGPV-FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGN 92 (394)
T ss_dssp EEEEEETTE-EEEEEECTT------SCSEE--EEEEE-STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSC
T ss_pred EEEEEecCc-eEEEECCCC------CCCce--ECCcc-CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCC
Confidence 477777766 555544320 12222 22111 124569999997 45666666555 34333 233322
Q ss_pred eeEec------cC-------CCCCeEEEEEeCC--CCCCCCceEEEeeCCCeEEEEEC--CCcceeeeee----------
Q 019326 75 LGAIH------HH-------ESSSVTSLAFYTP--QNLSVPRNLFSTSADGFVSIFDA--DPFVLLTSVK---------- 127 (343)
Q Consensus 75 ~~~~~------~~-------~~~~v~~l~~~~~--~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~---------- 127 (343)
-..+. .. ....|.++++.|. . ..++++...+.|...+- .+.+.+....
T Consensus 93 W~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-----~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~ 167 (394)
T 3b7f_A 93 WTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEP-----GTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTG 167 (394)
T ss_dssp CEECSBCCCCCCCC----CCCCCEEEEEEECCTTST-----TCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHC
T ss_pred ceECCccccCCCcccccccccccceeEEEeCCCCCC-----CEEEEEecCCcEEEEcCCCCCeEECcCccCCcccccccc
Confidence 22221 11 0125778888863 3 46777766666655532 1222222110
Q ss_pred ------eccccEEEEEEecC-CCEEEEEeCCCeEEEEEccCCceeEEEEc--------------CCcceEEEEeCC-CCE
Q 019326 128 ------VHKKGVNDLAVHHS-GKLALTVGRDDCLAMVNLVRGRRSFYHKI--------------GKEASLIKFDGS-GEK 185 (343)
Q Consensus 128 ------~~~~~v~~i~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--------------~~~~~~~~~~~~-~~~ 185 (343)
.....+.+|.++|. ...++.+..++.|...+ ..++.-..... ...+..+.++|. ...
T Consensus 168 ~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~ 246 (394)
T 3b7f_A 168 GEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDI 246 (394)
T ss_dssp CC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTE
T ss_pred ccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCE
Confidence 01235788999884 34555555444443332 12221111110 123677888886 356
Q ss_pred EEEEeCCcEEEEEcccceeEEEec--CC----cceEEeeec--CCCeEEEEe
Q 019326 186 FFMVTEEKVGIHQAEDAKLLCELD--GK----KRILCAAPG--ENGVLFTGG 229 (343)
Q Consensus 186 ~~~~~~~~i~~~d~~~~~~~~~~~--~~----~~i~~~~~~--~~~~l~~~~ 229 (343)
++++..+.|...+- .++....+. .. ..+.++.++ +.+.++++.
T Consensus 247 l~vg~~~gl~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 247 LYQQNHCGIYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp EEEEETTEEEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred EEEEcCCeEEEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 66665555544432 233333332 11 234566665 344555553
No 365
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=64.16 E-value=54 Score=26.18 Aligned_cols=181 Identities=6% Similarity=0.015 Sum_probs=96.7
Q ss_pred EEEEecCceEEEeeCC--------------CeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEee----
Q 019326 46 TTVAVSGTAAASGGTD--------------DTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTS---- 107 (343)
Q Consensus 46 ~~l~~~~~~l~s~~~d--------------g~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~---- 107 (343)
..+...+++|+-.... ..|+..+++..+.. .+... .. ..|++.+ +.|+-..
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~~---~~--~~~s~~g-----~~Iy~~~~~~~ 126 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDPD---PC--IYASLIG-----NYIYYLHYDTQ 126 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEECS---CE--EEEEEET-----TEEEEEEESSS
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-EeecC---Cc--cEEEEeC-----CEEEEEeecCC
Confidence 3444447766665442 46777787766433 23222 22 2566666 5666554
Q ss_pred CCCeEEEEECCCcceeeeeeeccccEEEEEEecCCCEEEEEeC-CCeEEEEEccCCceeEEEEcCCcceEEEEeCCCCEE
Q 019326 108 ADGFVSIFDADPFVLLTSVKVHKKGVNDLAVHHSGKLALTVGR-DDCLAMVNLVRGRRSFYHKIGKEASLIKFDGSGEKF 186 (343)
Q Consensus 108 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (343)
.+..|...+++... ...+..+.. .+++++++.|+-.+. ...|...++..+....... .... ..+.|++.++
T Consensus 127 ~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~i 198 (302)
T 3s25_A 127 TATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNV 198 (302)
T ss_dssp SCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEE
T ss_pred CCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEE
Confidence 34456666666433 344443322 456778877776655 6778888887665443322 2222 3456888888
Q ss_pred EEE-eC--CcEEEEEcccceeEEEecCCcceEEeeecCCCeEEEE--eCCCcEEEEECCCCceeEEec
Q 019326 187 FMV-TE--EKVGIHQAEDAKLLCELDGKKRILCAAPGENGVLFTG--GEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 187 ~~~-~~--~~i~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~ 249 (343)
+-. .. ..|..-++.... ...+. ...+..+.+ .++.|+-+ ...+.|..-++. |.....+.
T Consensus 199 y~t~~~~~~~I~~~~ldG~~-~~~Lt-~~~~~~~~~-~g~~Iy~~~~~~~~~i~~~~~D-G~~r~~l~ 262 (302)
T 3s25_A 199 YYMDVNRDNAIVHVNINNPN-PVVLT-EANIEHYNV-YGSLIFYQRGGDNPALCVVKND-GTGFKELA 262 (302)
T ss_dssp EEEEGGGTTEEEEECSSSCC-CEECS-CSCEEEEEE-ETTEEEEEECSSSCEEEEEETT-SCCCEEEE
T ss_pred EEEEcCCCcEEEEEECCCCC-eEEEe-CCCcceEEE-CCCEEEEEECCCCcEEEEEECC-CCccEEee
Confidence 776 22 356566655444 23332 233445555 34444443 234567777765 33334443
No 366
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=63.50 E-value=13 Score=33.78 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=30.1
Q ss_pred ceEEeeecCCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 213 RILCAAPGENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 213 ~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
.|.++.+ +..++++-+.|.++|+|++++++++.+..
T Consensus 223 ~Is~~~~-~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF-HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE-TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc-CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3555555 67899999999999999999999888776
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=62.98 E-value=50 Score=29.25 Aligned_cols=61 Identities=13% Similarity=-0.016 Sum_probs=41.2
Q ss_pred CCeEEEEEeCCCCCCCCceEEEeeC------------CCeEEEEECCCcceeeeeeec-cccEEEEEEecCCCEEEEEe
Q 019326 84 SSVTSLAFYTPQNLSVPRNLFSTSA------------DGFVSIFDADPFVLLTSVKVH-KKGVNDLAVHHSGKLALTVG 149 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~~~~ 149 (343)
.....|.|.+++ .+.+.... ...|..++..+++....+... ...++.++|+||++.|++.-
T Consensus 476 nsPDnL~fd~~G-----~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAG-----RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTC-----CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCC-----CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 456689999988 44442221 125777777777766555543 35789999999998887764
No 368
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=62.82 E-value=36 Score=30.30 Aligned_cols=58 Identities=14% Similarity=-0.001 Sum_probs=40.0
Q ss_pred eEEEEEeCCCCCCCCceEEEeeCC------------CeEEEEECCCcceeeeeeecc-ccEEEEEEecCCCEEEEE
Q 019326 86 VTSLAFYTPQNLSVPRNLFSTSAD------------GFVSIFDADPFVLLTSVKVHK-KGVNDLAVHHSGKLALTV 148 (343)
Q Consensus 86 v~~l~~~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~~~ 148 (343)
.--|.|+|.+ .+++.-..+ ..+.+.+..+++..+.+..+. ..++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G-----~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAG-----RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTC-----CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCC-----CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4668999998 444433321 245666777777766666554 489999999999887765
No 369
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=62.24 E-value=75 Score=27.25 Aligned_cols=103 Identities=16% Similarity=0.214 Sum_probs=61.3
Q ss_pred CCeEEEEEeCCCCCCCCc-eEEEeeCCCeEEEEECCCcc---eeeeee-----e----ccccEEEEEEecC----CCEEE
Q 019326 84 SSVTSLAFYTPQNLSVPR-NLFSTSADGFVSIFDADPFV---LLTSVK-----V----HKKGVNDLAVHHS----GKLAL 146 (343)
Q Consensus 84 ~~v~~l~~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~---~~~~~~-----~----~~~~v~~i~~~~~----~~~l~ 146 (343)
.....|+|.|++ . .|+++...|.|++++..... .+..+. + .......|+|+|+ +.+.+
T Consensus 14 ~~P~~~a~~pdG-----~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv 88 (463)
T 2wg3_C 14 RQPVGALHSGDG-----SQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYV 88 (463)
T ss_dssp SSEEEEECCSSS-----SCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEE
T ss_pred CCceEEEECCCC-----CeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEE
Confidence 456789999998 4 47777889999999754321 122111 0 1356789999996 33333
Q ss_pred EEeC--C----------CeEEEEEccCC----------ceeEEEEc---CCcceEEEEeCCCCEEEEEeC
Q 019326 147 TVGR--D----------DCLAMVNLVRG----------RRSFYHKI---GKEASLIKFDGSGEKFFMVTE 191 (343)
Q Consensus 147 ~~~~--d----------~~i~~wd~~~~----------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 191 (343)
+-+. + ..|.-|.+..+ +.+..... .+....+.|.|++.++++..+
T Consensus 89 ~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 89 SYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp EEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred EEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 3322 1 14444655421 22222221 255678999999988777743
No 370
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=54.97 E-value=85 Score=27.85 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=39.9
Q ss_pred cEEEEEEecCCCEEEEEeC------------CCeEEEEEccCCceeEEEEcC--CcceEEEEeCCCCEEEEE
Q 019326 132 GVNDLAVHHSGKLALTVGR------------DDCLAMVNLVRGRRSFYHKIG--KEASLIKFDGSGEKFFMV 189 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~------------d~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 189 (343)
....|.|.++|.+.+.... ...+..++..+++.......+ ..++.++|+|+++.|+++
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 5678999999987773322 125666777677755544433 567889999999887776
No 371
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=53.56 E-value=69 Score=28.53 Aligned_cols=58 Identities=17% Similarity=0.257 Sum_probs=37.5
Q ss_pred cEEEEEEecCCCEEEEEeCC------------CeEEEEEccCCceeEEEEc--CCcceEEEEeCCCCEEEEE
Q 019326 132 GVNDLAVHHSGKLALTVGRD------------DCLAMVNLVRGRRSFYHKI--GKEASLIKFDGSGEKFFMV 189 (343)
Q Consensus 132 ~v~~i~~~~~~~~l~~~~~d------------~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 189 (343)
..-.|+|+|.|++++.-..+ ..+.+.+..+++....... ..+++.++|+|+++.+++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34678999999866654432 2355556666665444433 3667788899888776654
No 372
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=51.74 E-value=1e+02 Score=25.60 Aligned_cols=131 Identities=8% Similarity=0.083 Sum_probs=76.9
Q ss_pred eEEEEECCCc--ceeeeeeec------cccEEEEEEe---cC----CCEE-EEEeCCCeEEEEEccCCceeEEEE-----
Q 019326 111 FVSIFDADPF--VLLTSVKVH------KKGVNDLAVH---HS----GKLA-LTVGRDDCLAMVNLVRGRRSFYHK----- 169 (343)
Q Consensus 111 ~i~iwd~~~~--~~~~~~~~~------~~~v~~i~~~---~~----~~~l-~~~~~d~~i~~wd~~~~~~~~~~~----- 169 (343)
.|.+||+.+. +.++++... ...+..+.+. |. +.++ ++=+..+.|.++|+.+++.-+...
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5889999998 888887642 3467888887 22 2333 333457889999999887443331
Q ss_pred --------------cCCcceEEEEeCC----CCEEEEEeCCcEEEEEccc-----c---eeEEEecCC---cceEEeeec
Q 019326 170 --------------IGKEASLIKFDGS----GEKFFMVTEEKVGIHQAED-----A---KLLCELDGK---KRILCAAPG 220 (343)
Q Consensus 170 --------------~~~~~~~~~~~~~----~~~~~~~~~~~i~~~d~~~-----~---~~~~~~~~~---~~i~~~~~~ 220 (343)
....+..++++|+ ++.+....-..-++|.+.+ . ..++.+... ..-..+++.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEEC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEe
Confidence 1234566888887 6777666222223333322 1 122222211 233345553
Q ss_pred --CCCeEEEEeCCCcEEEEECCC
Q 019326 221 --ENGVLFTGGEDRSITAWDTNS 241 (343)
Q Consensus 221 --~~~~l~~~~~dg~i~i~d~~~ 241 (343)
.+.++++--....|..|+..+
T Consensus 284 ~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp TTTCEEEEEESSSSEEEEEETTS
T ss_pred CCCCeEEEEeccCCeEEEEeCCC
Confidence 344555666778899999875
No 373
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=50.78 E-value=1.1e+02 Score=25.61 Aligned_cols=296 Identities=9% Similarity=0.024 Sum_probs=146.5
Q ss_pred ccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCC-e-----------e
Q 019326 7 SYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTS-S-----------S 74 (343)
Q Consensus 7 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~-~-----------~ 74 (343)
..+|.|+.|=.......-.............+. ....|..|+......+.-..||.|..|=.... + .
T Consensus 40 ~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~-~l~~v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~ 118 (423)
T 3mvd_K 40 TVLGNVLVCGNGDVGQLGLGEDILERKRLSPVA-GIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSES 118 (423)
T ss_dssp CCCEEEEEEEECTTSTTCSCSSCCEEEEEEECC-SCSSEEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSS
T ss_pred cCCCcEEEEeCCCCCCCCCCCCCccCcCCeEcc-CCCCceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCcccc
Confidence 467889999654321110000001111111222 22457777777777777788999999965431 1 0
Q ss_pred -eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC--CC-cce--------eeeee-eccccEEEEEEecC
Q 019326 75 -LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA--DP-FVL--------LTSVK-VHKKGVNDLAVHHS 141 (343)
Q Consensus 75 -~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~--~~-~~~--------~~~~~-~~~~~v~~i~~~~~ 141 (343)
...+. . ...|..++... ...++-..||.|+.|-. .. +++ ..... .....|..|+...
T Consensus 119 ~P~~v~-~-~~~i~~va~G~-------~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~- 188 (423)
T 3mvd_K 119 KPDLID-L-PGKALCISAGD-------SHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGA- 188 (423)
T ss_dssp SCEECC-C-SSCEEEEEECS-------SEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEECS-
T ss_pred CCeEEc-C-CCCEEEEEcCc-------CeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCC-
Confidence 11111 1 24566666543 34566678999999975 22 211 00011 1223566666543
Q ss_pred CCEEEEEeCCCeEEEEEccCCce----------------------eEEEEcC--CcceEEEEeCCCCEEEEE-eCCcEEE
Q 019326 142 GKLALTVGRDDCLAMVNLVRGRR----------------------SFYHKIG--KEASLIKFDGSGEKFFMV-TEEKVGI 196 (343)
Q Consensus 142 ~~~l~~~~~d~~i~~wd~~~~~~----------------------~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~i~~ 196 (343)
.+.+....+|.|+.|-....-+ ....... ..+..++.... ..++.. .++.+..
T Consensus 189 -~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~-~~~~~~~~~g~v~~ 266 (423)
T 3mvd_K 189 -DHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNY-CTFMRESQTQVIWA 266 (423)
T ss_dssp -SEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETT-EEEEEETTTCCEEE
T ss_pred -CeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECCc-EEEEEECCCCeEEE
Confidence 4566667899999996432110 1111111 22333333221 122222 6777777
Q ss_pred EEcccce-----------eEEEec-CCcceEEeeecCCCeEEEEeCCCcEEEEECCCC------------ceeEEecccc
Q 019326 197 HQAEDAK-----------LLCELD-GKKRILCAAPGENGVLFTGGEDRSITAWDTNSG------------KVAYCIEDAH 252 (343)
Q Consensus 197 ~d~~~~~-----------~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~------------~~~~~~~~~h 252 (343)
|-..... ...... ....|..++. ...+.++-..+|.|+.|-.... .....+. .-
T Consensus 267 wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~-G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~-~l 344 (423)
T 3mvd_K 267 TGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAG-GQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVK-KL 344 (423)
T ss_dssp EEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEE-CSSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECT-TC
T ss_pred EeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEc-ccCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEec-cC
Confidence 7543210 011111 1345666665 3445556678999999965321 1122232 22
Q ss_pred cccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccCc-ccc--------CCCccccc-ccccceeEEEcCCCCce
Q 019326 253 SARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRMA-IKE--------KPLPLAEA-KTNSRLTCLAGSSTKSF 322 (343)
Q Consensus 253 ~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~--------~~~~~~~~-~~~~~i~~~~~s~~~~~ 322 (343)
...|..|+.... +.+.-..||.|+.|=.... +.. .|..+... .....|..++......+
T Consensus 345 ~~~v~~ia~G~~-----------hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~~~~~~~~v~~va~G~~ht~ 413 (423)
T 3mvd_K 345 TEKIVSVGCGEV-----------CSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAI 413 (423)
T ss_dssp CSCEEEEEEETT-----------EEEEEETTSCEEEEECCTTSCSSSSSSCCEEEEEECCSTTTTTCCEEEEEECSSEEE
T ss_pred CCCEEEEEcCCC-----------eEEEEcCCCCEEEECCCCCCCCCCCCCCCcccCeEEeCcccCCCEEEEEEECCCcEE
Confidence 235666665543 5555578999999966542 110 11111110 12234677777666666
Q ss_pred eccccC
Q 019326 323 KRPQIG 328 (343)
Q Consensus 323 ~~~~~~ 328 (343)
.+...+
T Consensus 414 ~l~~~~ 419 (423)
T 3mvd_K 414 FLVKAD 419 (423)
T ss_dssp EEEECC
T ss_pred EEEccc
Confidence 555444
No 374
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=50.61 E-value=96 Score=24.86 Aligned_cols=183 Identities=9% Similarity=0.011 Sum_probs=103.1
Q ss_pred CceEEEeeCCCeEEEEEcCCCee-------eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC-----
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSS-------LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP----- 119 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----- 119 (343)
...+++.+.+|.|+--.+..-+. +..+...+...+..+...... ..++..+..|.++-.....
T Consensus 8 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~-----~~ll~~T~~G~~~~~~~~~ip~~~ 82 (312)
T 1suu_A 8 ENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTH-----DYLFMISNEGKLYLINAYEIKDSS 82 (312)
T ss_dssp CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETT-----CEEEEEETTSEEEEEEGGGSCC--
T ss_pred CCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCC-----CEEEEEECCCeEEEEEHHHCCCCC
Confidence 45678888999998876653321 111111213455555444444 5788888899877766531
Q ss_pred ----cce---eeeeeeccccEEEEEEec---CCCEEEEEeCCCeEEEEEccCCce-------eEEEEcCCcceEEEEeCC
Q 019326 120 ----FVL---LTSVKVHKKGVNDLAVHH---SGKLALTVGRDDCLAMVNLVRGRR-------SFYHKIGKEASLIKFDGS 182 (343)
Q Consensus 120 ----~~~---~~~~~~~~~~v~~i~~~~---~~~~l~~~~~d~~i~~wd~~~~~~-------~~~~~~~~~~~~~~~~~~ 182 (343)
|.. .-.+. ....|..+...+ +..+++..+..|.++...+..-.. .........+..+.....
T Consensus 83 r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~ 161 (312)
T 1suu_A 83 RASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFK 161 (312)
T ss_dssp -----CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECT
T ss_pred ccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCC
Confidence 111 11122 223455554333 456788899999999988754321 111122344444444333
Q ss_pred CC-EEEEEeCCcEEEEEcccce---------eEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECC
Q 019326 183 GE-KFFMVTEEKVGIHQAEDAK---------LLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTN 240 (343)
Q Consensus 183 ~~-~~~~~~~~~i~~~d~~~~~---------~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~ 240 (343)
+. .++...+|.+..+....-. ....+.....+..+... ++..+++.+..|.....++.
T Consensus 162 ~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 162 DEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 44 4444488888888775421 12223334556665543 45678888899999888874
No 375
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=45.30 E-value=1.2e+02 Score=24.30 Aligned_cols=223 Identities=12% Similarity=0.113 Sum_probs=118.1
Q ss_pred ceEEEeeCCCeEEEEEcCCCeee-------e--EeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC---CC-
Q 019326 53 TAAASGGTDDTIHLYDLSTSSSL-------G--AIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA---DP- 119 (343)
Q Consensus 53 ~~l~s~~~dg~i~iwd~~~~~~~-------~--~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~---~~- 119 (343)
..+++.+.+|.|+--.+..-+.. . .++.. ..+..+...... ..|+..+..|.++-+.. ..
T Consensus 4 ~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~--D~l~~~~~~~~~-----~~ll~fT~~G~~~~~~~~elp~~ 76 (307)
T 1zi0_A 4 DVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE--DFIDRLLVANTH-----DHILCFSSRGRVYSMKVYQLPEA 76 (307)
T ss_dssp EEEEEEETTSEEEEEECC----------------------CCEEEEEEEETT-----CEEEEEETTSEEEEEEGGGSCCC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC--CEEEEEEEECCC-----CEEEEEECCCEEEEEEhhHCcCC
Confidence 45778888999887766532211 1 12233 445444444444 47777888888766654 21
Q ss_pred -----cceee---eeeeccccEEEEEEe---cCCCEEEEEeCCCeEEEEEccCCce-------eEEEEcCCcceEEEE-e
Q 019326 120 -----FVLLT---SVKVHKKGVNDLAVH---HSGKLALTVGRDDCLAMVNLVRGRR-------SFYHKIGKEASLIKF-D 180 (343)
Q Consensus 120 -----~~~~~---~~~~~~~~v~~i~~~---~~~~~l~~~~~d~~i~~wd~~~~~~-------~~~~~~~~~~~~~~~-~ 180 (343)
|.++. .+. ....|.++... +++.+++..+.+|.++-..+..-.. .......+.+..+.. .
T Consensus 77 ~~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~ 155 (307)
T 1zi0_A 77 TRGARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTS 155 (307)
T ss_dssp CSSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEEC
T ss_pred CCCCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeC
Confidence 22221 122 23456555442 3456789999999999988753211 111112234434333 3
Q ss_pred CCCCEEEEEeCCcEEEEEcccce---------eEEEecCCcceEEeeec-CCCeEEEEeCCCcEEEEECCCC--------
Q 019326 181 GSGEKFFMVTEEKVGIHQAEDAK---------LLCELDGKKRILCAAPG-ENGVLFTGGEDRSITAWDTNSG-------- 242 (343)
Q Consensus 181 ~~~~~~~~~~~~~i~~~d~~~~~---------~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~~-------- 242 (343)
.+...++...+|.+..+....-. ....+.....|.++... ++..+++.+..|.++-.++..-
T Consensus 156 ~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~k 235 (307)
T 1zi0_A 156 GEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATK 235 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSC
T ss_pred CCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCC
Confidence 33444444488888887765321 11223344556666544 4457888889999888876321
Q ss_pred -ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 243 -KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 243 -~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
.....+. .-.+.+-.+....+.. .++..+.+|.+.-+++..
T Consensus 236 G~~~~~~~-~~~~~lv~~~~v~~~~---------~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 236 GVISIKVT-ERNGLVVGAVQVDDCD---------QIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp CEESSCCC-TTTCSEEEEEEECTTC---------EEEEEESSCCEEEEEGGG
T ss_pred CEEeeEec-CCCCeEEEEEEeCCCc---------eEEEEcCCCcEEEEeccc
Confidence 1122222 1224444444333333 566777788877777765
No 376
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=40.89 E-value=1.3e+02 Score=23.58 Aligned_cols=189 Identities=10% Similarity=0.064 Sum_probs=103.9
Q ss_pred CCeEEEEec--CceEEEeeCCCeEEE---EEcCCCeeeeEeccCCCCCeEEEEEeC--CCCCCCCceEEEeeCCCeEEEE
Q 019326 43 SPITTVAVS--GTAAASGGTDDTIHL---YDLSTSSSLGAIHHHESSSVTSLAFYT--PQNLSVPRNLFSTSADGFVSIF 115 (343)
Q Consensus 43 ~~v~~l~~~--~~~l~s~~~dg~i~i---wd~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~~~~~~l~s~~~dg~i~iw 115 (343)
+.+..+... .+.|+.-+..|.++- |++..++....+. . ...|..+.. + +. .+++..+.+|.++-.
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~-~e~i~~v~~-~~~~~-----~~~v~~T~~G~iKr~ 95 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-R-EEKIVGAFI-REKFG-----NRLLLATKKGYVKKI 95 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-T-TCCEEEEEE-GGGSC-----SEEEEEETTSEEEEE
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-C-CCEEEEEEC-CcCCC-----CEEEEEeCCCEEEEE
Confidence 344444333 556666677787654 3333322111132 2 466766644 3 23 689999999999999
Q ss_pred ECCCcc------eeeeeeeccccEEEEEEecCCCEEEEEeCCCeEEEEEccCCc---------eeEEEEcCCcceEEEEe
Q 019326 116 DADPFV------LLTSVKVHKKGVNDLAVHHSGKLALTVGRDDCLAMVNLVRGR---------RSFYHKIGKEASLIKFD 180 (343)
Q Consensus 116 d~~~~~------~~~~~~~~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~~---------~~~~~~~~~~~~~~~~~ 180 (343)
.+.... ....++ ..+.+..+........++..+..|.+..+....-. ..........+..+...
T Consensus 96 ~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~ 174 (276)
T 3no0_A 96 PLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIW 174 (276)
T ss_dssp EGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEE
T ss_pred EHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEe
Confidence 875532 111222 23455555555556688888999999888764321 11111223445554444
Q ss_pred CCCCEEEEE-eCCcEEEEEcccce-------eEEEecCCcceEEeee-cCCCeEEEEeCCCcEEE--EECC
Q 019326 181 GSGEKFFMV-TEEKVGIHQAEDAK-------LLCELDGKKRILCAAP-GENGVLFTGGEDRSITA--WDTN 240 (343)
Q Consensus 181 ~~~~~~~~~-~~~~i~~~d~~~~~-------~~~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~i--~d~~ 240 (343)
+++..++.. ..|.++...+.... -+..+.....+..+.. .++..++..+.+|.+.. ++..
T Consensus 175 ~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 175 NGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred CCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 445555555 78888887765422 2222233334444433 23446666777777777 7654
No 377
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=36.94 E-value=2e+02 Score=24.62 Aligned_cols=105 Identities=15% Similarity=0.090 Sum_probs=58.3
Q ss_pred CCeEEEEec--Cc-eEEEeeCCCeEEEEEcCCCe---eeeEecc--------CCCCCeEEEEEeCC----CCCCCCceEE
Q 019326 43 SPITTVAVS--GT-AAASGGTDDTIHLYDLSTSS---SLGAIHH--------HESSSVTSLAFYTP----QNLSVPRNLF 104 (343)
Q Consensus 43 ~~v~~l~~~--~~-~l~s~~~dg~i~iwd~~~~~---~~~~~~~--------~~~~~v~~l~~~~~----~~~~~~~~l~ 104 (343)
..-..|+|. +. .|+++...|.|++++..... .+..+.. ........|+|+|+ + .+.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~-----~lYv 88 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG-----KLYV 88 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC-----EEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCC-----EEEE
Confidence 345678887 43 46667888999999754321 2222210 01356889999996 3 2333
Q ss_pred EeeC--C----------CeEEEEECCC----------cceeeeeee--ccccEEEEEEecCCCEEEEEeCCC
Q 019326 105 STSA--D----------GFVSIFDADP----------FVLLTSVKV--HKKGVNDLAVHHSGKLALTVGRDD 152 (343)
Q Consensus 105 s~~~--d----------g~i~iwd~~~----------~~~~~~~~~--~~~~v~~i~~~~~~~~l~~~~~d~ 152 (343)
+-+. + ..|.-|.+.. .+.+..+.. .......|+|.|||.+.++.+..+
T Consensus 89 ~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 89 SYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp EEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred EEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 3222 1 1344455532 122222221 122457899999998877776543
No 378
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=30.34 E-value=2.4e+02 Score=23.47 Aligned_cols=257 Identities=9% Similarity=0.035 Sum_probs=131.8
Q ss_pred ccCCeEEEEEeecCCCCC-CCCcceeeEEeEEecCCCCCeEEEEecCceEEEeeCCCeEEEEEcCCC-ee----------
Q 019326 7 SYEKFIWGYKLKPSNHYS-SDQKTLTLTQLFSYPAHLSPITTVAVSGTAAASGGTDDTIHLYDLSTS-SS---------- 74 (343)
Q Consensus 7 ~~d~~i~vw~~~~~~~~~-~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~-~~---------- 74 (343)
..+|.|+.|=.......- .........+.. +. -...|..++......+.-..||.|..|-.... ++
T Consensus 24 ~~~g~v~~wG~n~~GqLG~g~~~~~~~~P~~-v~-~~~~i~~va~G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~ 101 (413)
T 1a12_A 24 TEPGLVLTLGQGDVGQLGLGENVMERKKPAL-VS-IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE 101 (413)
T ss_dssp CCCBEEEEEEECTTSTTCSCTTCCEEEEEEE-EC-CSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGG
T ss_pred cCCCcEEEEECCCCCcCCCCCCccccccceE-cc-CCCCeEEEEeCCCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccc
Confidence 567889999765421110 000000112221 22 23678888877666677778999999965431 10
Q ss_pred --eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC--C-Ccce-----------eeeeeeccccEEEEEE
Q 019326 75 --LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA--D-PFVL-----------LTSVKVHKKGVNDLAV 138 (343)
Q Consensus 75 --~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~--~-~~~~-----------~~~~~~~~~~v~~i~~ 138 (343)
...+ .- ...|..++.-. ...++-..||.|+.|-. . .+++ ...+ .....|..|+.
T Consensus 102 ~~P~~v-~l-~~~i~~va~G~-------~hs~alt~~G~v~~wG~~~n~~GqlG~~~~~~~~~~P~~v-~~~~~i~~ia~ 171 (413)
T 1a12_A 102 MVPGKV-EL-QEKVVQVSAGD-------SHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV-QLDVPVVKVAS 171 (413)
T ss_dssp GSCEEC-CC-CSCEEEEEECS-------SEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE-CCSSCEEEEEE
T ss_pred cCCeEe-cC-CCcEEEEecCC-------CeEEEEcCCCcEEEeeCCcCCCCccCcCCccccccCCEEe-cCCCCEEEEEe
Confidence 0111 11 24566666543 34566678999999975 1 1111 0011 12335666665
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCCcee----------------------EEEEc-------CCcceEEEEeCCCCEEEE-
Q 019326 139 HHSGKLALTVGRDDCLAMVNLVRGRRS----------------------FYHKI-------GKEASLIKFDGSGEKFFM- 188 (343)
Q Consensus 139 ~~~~~~l~~~~~d~~i~~wd~~~~~~~----------------------~~~~~-------~~~~~~~~~~~~~~~~~~- 188 (343)
-. .+.+....||.|+.|-....-++ ..... ...+..++.. ..+.++
T Consensus 172 G~--~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G--~~hs~al 247 (413)
T 1a12_A 172 GN--DHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCG--AYFTFAI 247 (413)
T ss_dssp CS--SEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEE--TTEEEEE
T ss_pred cC--ceEEEEcCCCCEEEeeCCCCCccCCCccccccccccccccccccCceEeeccccccCCccEEEEEeC--CCEEEEE
Confidence 43 35666678899999965432110 00111 1223333332 223333
Q ss_pred EeCCcEEEEEcccce-----------eEEEec--CC--cceEEeeecCCCeEEEEeCCCcEEEEECCC------C-----
Q 019326 189 VTEEKVGIHQAEDAK-----------LLCELD--GK--KRILCAAPGENGVLFTGGEDRSITAWDTNS------G----- 242 (343)
Q Consensus 189 ~~~~~i~~~d~~~~~-----------~~~~~~--~~--~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~------~----- 242 (343)
..++.+..|-....- ....+. .. ..|..++. .....++-..+|.|+.|-... +
T Consensus 248 t~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~-G~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~ 326 (413)
T 1a12_A 248 SHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSG-GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEE 326 (413)
T ss_dssp ETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEE-CSSEEEEEETTSCEEEEECCGGGTTCSCTTCCC
T ss_pred eCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEec-ccceEEEEeCCCCEEEeeCCCCCccCCCCCCcc
Confidence 377888888654210 111111 11 33666665 334555556789999996532 1
Q ss_pred -ceeEEecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEEEeccC
Q 019326 243 -KVAYCIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICVWDVRM 293 (343)
Q Consensus 243 -~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 293 (343)
.....+. ....|..|+.-.. +.+.-..||.|+.|=...
T Consensus 327 ~~~P~~v~--~l~~v~~v~~G~~-----------hs~alt~~G~v~~wG~n~ 365 (413)
T 1a12_A 327 KSIPTLIS--RLPAVSSVACGAS-----------VGYAVTKDGRVFAWGMGT 365 (413)
T ss_dssp EEEEEECC--SSSSEEEEEECSS-----------EEEEEETTSCEEEEECCT
T ss_pred ccCCEEec--ccCceeEEEECcc-----------eEEEEeCCCCEEEecCCC
Confidence 0112222 1225666655333 566667899999996654
No 379
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=28.69 E-value=2.2e+02 Score=22.67 Aligned_cols=191 Identities=9% Similarity=0.033 Sum_probs=103.2
Q ss_pred eEEeccCCeEEEEEeecCCCCCCCCcceeeEEeEEecCCCCCeEEEEec-CceEEEeeCCCeEEEEEcCCC---------
Q 019326 3 LIAGSYEKFIWGYKLKPSNHYSSDQKTLTLTQLFSYPAHLSPITTVAVS-GTAAASGGTDDTIHLYDLSTS--------- 72 (343)
Q Consensus 3 l~~g~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~--------- 72 (343)
+++.+.+|.|+--.+..-......+ .......++....-+..+..+ .+.++..+..|.++-.....-
T Consensus 11 ~v~~T~~G~iKr~~~~~~~~~~~~~---~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G 87 (312)
T 1suu_A 11 VVMLTKKGFLKRLSQNEYKLQGTGG---KGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKG 87 (312)
T ss_dssp EEEEETTCBEEEEEGGGSCBCCSSC---CCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------
T ss_pred EEEEeCCCEEEEeEHHHhhccccCC---CCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCC
Confidence 5778889999887765421110000 011112233333333333333 567777888898777765421
Q ss_pred ee---eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCcc-------eeeeeeeccccEEEEEEecCC
Q 019326 73 SS---LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPFV-------LLTSVKVHKKGVNDLAVHHSG 142 (343)
Q Consensus 73 ~~---~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~i~~~~~~ 142 (343)
.. .-.+.. ...|.++...++. ....+++..+..|.++...+.... ....+.. .+.+..+......
T Consensus 88 ~~i~~~l~l~~--~e~i~~~~~~~~~--~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 88 QNISELINLGD--QEEILTIKNSKDL--TDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp CBGGGTSCCCT--TCCEEEEEEESCC--CTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTT
T ss_pred cChhhccCCCC--CCEEEEEEEeccC--CCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCC
Confidence 11 111222 3456555444310 001578889999999998874322 2222332 4456666555556
Q ss_pred CEEEEEeCCCeEEEEEccCCc-------eeEEEE--cCCcceEEEEeCCCCEEEEE-eCCcEEEEEccc
Q 019326 143 KLALTVGRDDCLAMVNLVRGR-------RSFYHK--IGKEASLIKFDGSGEKFFMV-TEEKVGIHQAED 201 (343)
Q Consensus 143 ~~l~~~~~d~~i~~wd~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~ 201 (343)
..++..+.+|.+..+....-. -+.... ....+..+..-.++..+++. ..|......+..
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 678889999999999875421 111112 23444555444445544444 778888877754
No 380
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=26.81 E-value=2.1e+02 Score=24.79 Aligned_cols=56 Identities=14% Similarity=0.158 Sum_probs=37.1
Q ss_pred eEEEEeCCCcEEEEECC-CC-------ceeEEecc-cccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEEE
Q 019326 224 VLFTGGEDRSITAWDTN-SG-------KVAYCIED-AHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVICV 288 (343)
Q Consensus 224 ~l~~~~~dg~i~i~d~~-~~-------~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~v 288 (343)
.++.|+.+|.|.-.-.. .+ ..+.++.- ....+|..|.+++... +|+.++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~---------~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQ---------QLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTT---------EEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCC---------EEEEEECCeEEEE
Confidence 67889999987544332 21 12334431 2457899999998876 8999998876665
No 381
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=26.57 E-value=3.4e+02 Score=24.09 Aligned_cols=205 Identities=9% Similarity=0.090 Sum_probs=103.8
Q ss_pred eEEEEEcCCCeeee--EeccCC----------CCCeEEEEEeCCCCCCCCceEEEeeC----CCeEEEEECCCcceeeee
Q 019326 63 TIHLYDLSTSSSLG--AIHHHE----------SSSVTSLAFYTPQNLSVPRNLFSTSA----DGFVSIFDADPFVLLTSV 126 (343)
Q Consensus 63 ~i~iwd~~~~~~~~--~~~~~~----------~~~v~~l~~~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~ 126 (343)
.|..||...+++.. .+.... ...+....+.-++. ..|+.|+. ||++ +|...
T Consensus 293 ~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~----dEIv~Gs~~iD~dG~~-L~st~-------- 359 (591)
T 2zux_A 293 MLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGK----DEIIFGSMAVDHDGKG-MYSTG-------- 359 (591)
T ss_dssp EEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSS----CEEEETTEEECTTSCE-EEECS--------
T ss_pred EEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCC----ceEEEeeeEECCCCCE-eeeCC--------
Confidence 57888888776533 333210 02333344444552 45555442 3332 34331
Q ss_pred eeccccEEEEEEecC--CCEEEEEeCCC----eEEEEEccCCceeEEEEcC---CcceEEEEeCCC--CEEEEEeCCcEE
Q 019326 127 KVHKKGVNDLAVHHS--GKLALTVGRDD----CLAMVNLVRGRRSFYHKIG---KEASLIKFDGSG--EKFFMVTEEKVG 195 (343)
Q Consensus 127 ~~~~~~v~~i~~~~~--~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~i~ 195 (343)
.+|...+....|.|+ |..++.+.+++ -..+.|.++++.+...... +......+.|+. ..+.+ +. .
T Consensus 360 ~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~~pG~E~w~--~~--~ 435 (591)
T 2zux_A 360 LGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDPRYPGQEVWA--NG--S 435 (591)
T ss_dssp CCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCTTSSSCEEEE--TT--E
T ss_pred CCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCCCCCceEEEe--cC--c
Confidence 268888888888887 45677766652 3556899999988766543 223333344442 22222 11 3
Q ss_pred EEEcccceeEEEecCCcceEEeeecC--CCeEEEEeCCCcEEEEECCCCc--eeEEecc------cccccEEEEEEEecC
Q 019326 196 IHQAEDAKLLCELDGKKRILCAAPGE--NGVLFTGGEDRSITAWDTNSGK--VAYCIED------AHSARVKGIVVLTKN 265 (343)
Q Consensus 196 ~~d~~~~~~~~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~------~h~~~v~~~~~~~~~ 265 (343)
+|+... +.+........-..+-|.. ...++- .+.|.-|+...++ .+.++.. ....+...-.+..+-
T Consensus 436 l~~~~G-~~i~~~~p~~~N~~i~WdGDl~relld---~~~i~k~~~~~~~~~~l~~~~g~~snngtk~~P~l~aDi~GDw 511 (591)
T 2zux_A 436 LYSAKG-VKIGSGVPSSTNFGIWWDGDLLREQLD---SNRIDKWDYQNGVSKNMLTASGAAANNGTKATPTLQADLLGDW 511 (591)
T ss_dssp EECTTS-CBCSSCCCSCCSEEECCSSSSSCEEEE---TTEEEEEETTTTEEEEEEECTTEECBSGGGCBCSEEECCSSSS
T ss_pred eECCCC-CEecCCCCCCcceeEEECCCCcHhhhC---CceEEecccCCCceeEEEeecccccCCCCCCCEeeEEeccccC
Confidence 455433 3332211111122455542 134443 2468889887775 4444431 022333334444444
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEeccCcc
Q 019326 266 DGGSTAENPYLVASASSDGVICVWDVRMAI 295 (343)
Q Consensus 266 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 295 (343)
+++ .|+-...+..|+||......
T Consensus 512 REE-------vI~~t~D~~~LrIYtt~~pt 534 (591)
T 2zux_A 512 REE-------VVWRTEDSSALRIYTTTIPT 534 (591)
T ss_dssp SCE-------EEEEETTSSEEEEECCCCCC
T ss_pred eeE-------EEEEeCCCCeEEEEeCCCCC
Confidence 332 55544555679999886553
No 382
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=25.84 E-value=2.3e+02 Score=24.51 Aligned_cols=56 Identities=13% Similarity=0.096 Sum_probs=37.1
Q ss_pred ceEEEeeCCCeEEEEECC-Cc-------ceeeeeee--ccccEEEEEEecCCCEEEEEeCCCeEEE
Q 019326 101 RNLFSTSADGFVSIFDAD-PF-------VLLTSVKV--HKKGVNDLAVHHSGKLALTVGRDDCLAM 156 (343)
Q Consensus 101 ~~l~s~~~dg~i~iwd~~-~~-------~~~~~~~~--~~~~v~~i~~~~~~~~l~~~~~d~~i~~ 156 (343)
..++.|+.+|.|.=.-+. .. ..+.++.. ...+|..|.++++..+|++++.++.+++
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 467888889976543332 11 12333332 3468899999999999999988876654
No 383
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=24.98 E-value=2.4e+02 Score=21.75 Aligned_cols=139 Identities=12% Similarity=0.094 Sum_probs=71.9
Q ss_pred EEEEEeCCCeEEEEEccCCce-eEEEEcCCcc-eEEEEeCCCCEEEEEeCCcEEEEEccc-------ceeE---EEecCC
Q 019326 144 LALTVGRDDCLAMVNLVRGRR-SFYHKIGKEA-SLIKFDGSGEKFFMVTEEKVGIHQAED-------AKLL---CELDGK 211 (343)
Q Consensus 144 ~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~d~~~-------~~~~---~~~~~~ 211 (343)
..++.+.+|.|+--....... .........+ ..+..+.....++....|.++-+.... +..+ ..+...
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~ 83 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPG 83 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCC
Confidence 345556666665444322110 0011112222 223334445555555777766554322 2211 113344
Q ss_pred cceEEeeec-CCCeEEEEeCCCcEEEEECCC-------CceeEEecccccccEEEEEEE-ecCCCCCCCCCCeEEEEEcC
Q 019326 212 KRILCAAPG-ENGVLFTGGEDRSITAWDTNS-------GKVAYCIEDAHSARVKGIVVL-TKNDGGSTAENPYLVASASS 282 (343)
Q Consensus 212 ~~i~~~~~~-~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~h~~~v~~~~~~-~~~~~~~~~~~~~~l~s~~~ 282 (343)
..|..+... ++.+++..+..|.++...+.. +.....+. -.+.+-.+... ...+ .++..+.
T Consensus 84 e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~--~~d~lv~~~~~~~~~~---------~i~l~T~ 152 (256)
T 1zvt_A 84 ATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLP--ENAHVMPPVVIEDASD---------MLLAITQ 152 (256)
T ss_dssp CCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCC--TTCCBCCCEECCCTTC---------EEEEEET
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEEC--CCCEEEEEEEecCCCC---------EEEEEcC
Confidence 566666543 556788899999999987632 22333333 12344443333 2222 7888889
Q ss_pred CCcEEEEeccC
Q 019326 283 DGVICVWDVRM 293 (343)
Q Consensus 283 dg~i~vwd~~~ 293 (343)
+|.+..+.+..
T Consensus 153 ~G~~lrf~~~e 163 (256)
T 1zvt_A 153 AGRMLMFPVSD 163 (256)
T ss_dssp TSEEEEEEGGG
T ss_pred CCeEEEEEHHH
Confidence 99999998864
No 384
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=24.47 E-value=4.3e+02 Score=24.50 Aligned_cols=147 Identities=12% Similarity=0.136 Sum_probs=73.3
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC--CCcceeeeeee----ccccEEEEEEecCC-CEEEEEeCCCe--
Q 019326 83 SSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA--DPFVLLTSVKV----HKKGVNDLAVHHSG-KLALTVGRDDC-- 153 (343)
Q Consensus 83 ~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~----~~~~v~~i~~~~~~-~~l~~~~~d~~-- 153 (343)
...|.+|+++|.. +..+++++..+.|...+= .+++.+..... ....+.+|+++|.. ..++.+..+..
T Consensus 14 ~g~i~~i~~~p~~----~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~ 89 (789)
T 1sqj_A 14 GGYITGIVAHPKT----KDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGD 89 (789)
T ss_dssp CSCEEEEEECSSS----TTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTS
T ss_pred CCcEEEEEECCCC----CCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCC
Confidence 4689999999975 367788887777765542 22233221111 12469999999853 44444432211
Q ss_pred --EEEEEcc-CCceeEEEEcC----------CcceEEEEeCCC-CEEEEEe-CCcEEEEEcccceeEEEecC-------C
Q 019326 154 --LAMVNLV-RGRRSFYHKIG----------KEASLIKFDGSG-EKFFMVT-EEKVGIHQAEDAKLLCELDG-------K 211 (343)
Q Consensus 154 --i~~wd~~-~~~~~~~~~~~----------~~~~~~~~~~~~-~~~~~~~-~~~i~~~d~~~~~~~~~~~~-------~ 211 (343)
-.+|... .++.=.....+ ..+..++++|.. ..++++. .+.| ......++....+.. .
T Consensus 90 ~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl-~~S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 90 EWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI-WKSSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp SCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE-EEESSTTSSCEEETTSCCCCSTT
T ss_pred cccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE-EEECCCCcccCCCccCccccCCC
Confidence 2333333 23221111111 124567888754 3444443 3332 222233343333321 2
Q ss_pred cceEEeeecC--CCeEEEEeCC-CcE
Q 019326 212 KRILCAAPGE--NGVLFTGGED-RSI 234 (343)
Q Consensus 212 ~~i~~~~~~~--~~~l~~~~~d-g~i 234 (343)
..+..+.+++ .+.++++..+ +.|
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~~~~v 194 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATAPQGM 194 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESSTTCE
T ss_pred CCeEEEEECCCCCCEEEEEEcCCCeE
Confidence 3467777763 3466666654 444
No 385
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=24.09 E-value=1.5e+02 Score=19.23 Aligned_cols=61 Identities=7% Similarity=-0.097 Sum_probs=29.9
Q ss_pred CceEEEeeCCCeEEEEEcCCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCC
Q 019326 52 GTAAASGGTDDTIHLYDLSTSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADP 119 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 119 (343)
+.+.+.-..||.+.+|+...+..+..-.......-..+.+..++ ++++. ..++.+ +|...+
T Consensus 24 g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dG-----NLVl~-d~~~~~-iW~S~t 84 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSG-----ELDIT-DDRLNT-VFVSNT 84 (113)
T ss_dssp TTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTS-----CEEEE-CTTSCE-EEECSC
T ss_pred CCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCC-----cEEEE-CCCCCE-EEECCC
Confidence 55555566777777777533444444322201122345566666 34443 233433 565543
No 386
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=23.65 E-value=3.9e+02 Score=23.74 Aligned_cols=171 Identities=16% Similarity=0.141 Sum_probs=91.6
Q ss_pred eEEEEECCCcceeeeeee--------ccccEEEEEEecCC-CEEEEEeCCCe----------------------------
Q 019326 111 FVSIFDADPFVLLTSVKV--------HKKGVNDLAVHHSG-KLALTVGRDDC---------------------------- 153 (343)
Q Consensus 111 ~i~iwd~~~~~~~~~~~~--------~~~~v~~i~~~~~~-~~l~~~~~d~~---------------------------- 153 (343)
.|.+|+++ ++.+..+.. |...+....|.-|| ..+++...+|+
T Consensus 152 ~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEy 230 (591)
T 2zux_A 152 LIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEY 230 (591)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCE
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcE
Confidence 46666665 444444432 33456667777777 46666666665
Q ss_pred EEEEEccCCceeEEEEcC---Ccc---------------eEEEE-eCCCCEEEEEe----CCcEEEEEcccceeEEEe--
Q 019326 154 LAMVNLVRGRRSFYHKIG---KEA---------------SLIKF-DGSGEKFFMVT----EEKVGIHQAEDAKLLCEL-- 208 (343)
Q Consensus 154 i~~wd~~~~~~~~~~~~~---~~~---------------~~~~~-~~~~~~~~~~~----~~~i~~~d~~~~~~~~~~-- 208 (343)
+.++|-.+|+.+...... ..+ ..+++ .-+...++++. ...+..||..++++....
T Consensus 231 L~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~ 310 (591)
T 2zux_A 231 LTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTL 310 (591)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEe
Confidence 789999899887666542 111 12222 22233444442 234888998887664433
Q ss_pred cCC------------cceEEeeec-CC-CeEEEEeCCCcEEEEECCCCceeEEecccccccEEEEEEEecCCCCCCCCCC
Q 019326 209 DGK------------KRILCAAPG-EN-GVLFTGGEDRSITAWDTNSGKVAYCIEDAHSARVKGIVVLTKNDGGSTAENP 274 (343)
Q Consensus 209 ~~~------------~~i~~~~~~-~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 274 (343)
... ..+....+. ++ .-++.|+. ++| ..|+.+.....+|...+.--.+.|+....
T Consensus 311 d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~-----~iD-~dG~~L~st~~gHGDa~hv~dldP~r~Gl------ 378 (591)
T 2zux_A 311 DSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSM-----AVD-HDGKGMYSTGLGHGDALHTGDLDPGRPGL------ 378 (591)
T ss_dssp ETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTE-----EEC-TTSCEEEECSCCCCSCEEEECCCTTSSSC------
T ss_pred cCCCCCcccccccCCCCCeeEeCCCCCCceEEEeee-----EEC-CCCCEeeeCCCCCCCeeEEeecCCCCCCc------
Confidence 211 122222232 22 24444432 334 34666666655788887777777765322
Q ss_pred eEEEEEcCCC----cEEEEeccCcc
Q 019326 275 YLVASASSDG----VICVWDVRMAI 295 (343)
Q Consensus 275 ~~l~s~~~dg----~i~vwd~~~~~ 295 (343)
.++.+.+++ -..+.|..+++
T Consensus 379 -Ev~~~~E~~~~~~G~~~~dA~tG~ 402 (591)
T 2zux_A 379 -EVFQVHEDKNAKYGLSFRDAATGK 402 (591)
T ss_dssp -EEEEECCCTTSSCSEEEEETTTCC
T ss_pred -EEEEEecCCCCCCccEEEECCCCc
Confidence 555555541 23345665553
No 387
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=23.64 E-value=3e+02 Score=22.48 Aligned_cols=204 Identities=13% Similarity=0.017 Sum_probs=97.3
Q ss_pred CceEEEeeCCCeEEEEEcCC-CeeeeEe--ccCCCCCeEEEEEeCCCCCCCCceEEEeeCCC----eEEEEEC--CCcce
Q 019326 52 GTAAASGGTDDTIHLYDLST-SSSLGAI--HHHESSSVTSLAFYTPQNLSVPRNLFSTSADG----FVSIFDA--DPFVL 122 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~-~~~~~~~--~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg----~i~iwd~--~~~~~ 122 (343)
...|+.|...| +.+++... ++.-..+ ... ...|.+|++.|.. +..+++++..| .|...+- .+.+.
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~-~~~v~~i~~dp~~----~~~l~~g~~~g~~g~gl~~s~D~G~tW~~ 95 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFL-GHTIHHIVQDPRE----PERMLMAARTGHLGPTVFRSDDGGGNWTE 95 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEEST-TSEEEEEEECSSS----TTCEEEEEEC--CCEEEEEESSTTSCCEE
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCC-CCceEEEEECCCC----CCeEEEEecCCCCCccEEEeCCCCCCceE
Confidence 45677787777 55555432 2222211 122 4679999999832 13566666655 4544321 12222
Q ss_pred eee---eee--------ccccEEEEEEecC--CCEEEEEeCCCeEEEEEccCCceeEEEE--------------------
Q 019326 123 LTS---VKV--------HKKGVNDLAVHHS--GKLALTVGRDDCLAMVNLVRGRRSFYHK-------------------- 169 (343)
Q Consensus 123 ~~~---~~~--------~~~~v~~i~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~-------------------- 169 (343)
+.. +.. ....|.++++.|. ...+.++...+.|...+- .++.-....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~ 174 (394)
T 3b7f_A 96 ATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTP 174 (394)
T ss_dssp CSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----C
T ss_pred CCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCC
Confidence 221 110 1125778999872 455666665665544321 122111111
Q ss_pred cCCcceEEEEeCC-CCEEEEE-eCCcEEEEEcccceeEEEecC--------------CcceEEeeecCC--CeEEEEeCC
Q 019326 170 IGKEASLIKFDGS-GEKFFMV-TEEKVGIHQAEDAKLLCELDG--------------KKRILCAAPGEN--GVLFTGGED 231 (343)
Q Consensus 170 ~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~d~~~~~~~~~~~~--------------~~~i~~~~~~~~--~~l~~~~~d 231 (343)
....+..+.++|. ...++++ ..+.+...+ ..++....+.. ...+.++.+.+. +.++++...
T Consensus 175 ~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~ 253 (394)
T 3b7f_A 175 DGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC 253 (394)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT
T ss_pred CCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC
Confidence 1124567888873 3444444 555443332 22333332221 124778888743 677777655
Q ss_pred CcEEEEECCCCceeEEecccc-c---ccEEEEEEEecC
Q 019326 232 RSITAWDTNSGKVAYCIEDAH-S---ARVKGIVVLTKN 265 (343)
Q Consensus 232 g~i~i~d~~~~~~~~~~~~~h-~---~~v~~~~~~~~~ 265 (343)
+ |...+ ..++....+.... . ..+..+++.|..
T Consensus 254 g-l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~ 289 (394)
T 3b7f_A 254 G-IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRD 289 (394)
T ss_dssp E-EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSC
T ss_pred e-EEEeC-CCCCcceECCCCCCCCCccceEEEEECCCC
Confidence 4 44443 2244333332111 1 235667776543
No 388
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=23.37 E-value=2.5e+02 Score=24.63 Aligned_cols=69 Identities=19% Similarity=0.165 Sum_probs=41.6
Q ss_pred CeEEEEEeCCCCCCCCceEEEeeCCCeEEEEECCCc----ceeeeeee--ccccEE-EEEEecCCCEEEEEeCCCeEEE
Q 019326 85 SVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDADPF----VLLTSVKV--HKKGVN-DLAVHHSGKLALTVGRDDCLAM 156 (343)
Q Consensus 85 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~--~~~~v~-~i~~~~~~~~l~~~~~d~~i~~ 156 (343)
..++|+....++ -..++.|+.+|.|.=..+... ..+..+.. ...+|. .|.++++..+|++++.++.+++
T Consensus 401 ~lT~vav~~~~~---~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNG---YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETT---EEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCC---eEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 355555544332 157888999998765544322 12333332 235775 8899998888988887654443
No 389
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=21.76 E-value=3.3e+02 Score=24.70 Aligned_cols=56 Identities=9% Similarity=0.102 Sum_probs=35.9
Q ss_pred ceEEEeeCCCeEE-EEECCCcc-------eeeeee--eccccEEEEEEecCCCEEEEEeCCCeEEE
Q 019326 101 RNLFSTSADGFVS-IFDADPFV-------LLTSVK--VHKKGVNDLAVHHSGKLALTVGRDDCLAM 156 (343)
Q Consensus 101 ~~l~s~~~dg~i~-iwd~~~~~-------~~~~~~--~~~~~v~~i~~~~~~~~l~~~~~d~~i~~ 156 (343)
..++.|+.+|.|. +....... .+..+. ....+|..|.++++...|++++.++.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4677888888774 33221111 222222 24557899999999999999998876554
No 390
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=21.47 E-value=3.4e+02 Score=22.33 Aligned_cols=226 Identities=9% Similarity=0.037 Sum_probs=119.0
Q ss_pred CceEEEeeCCCeEEEEEcCC-------CeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeCCCeEEEEEC---CC--
Q 019326 52 GTAAASGGTDDTIHLYDLST-------SSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSADGFVSIFDA---DP-- 119 (343)
Q Consensus 52 ~~~l~s~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~---~~-- 119 (343)
...+++.+.+|.|+--.+.. ++-+..+...+...+..+...... ..|+..+..|.++-+.. ..
T Consensus 7 e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~-----d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 7 EDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTH-----DTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTT-----CEEEEEETTSEEEEEEGGGSCBCC
T ss_pred CCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCC-----CEEEEEeCCCeEEEEEHHHCcCCC
Confidence 45788889999998765432 111222222224566666555555 57777788887766653 21
Q ss_pred ----cceeee---eeeccccEEEEEEec---CCCEEEEEeCCCeEEEEEccCCce-------eEEEEcCCcceEEEEeCC
Q 019326 120 ----FVLLTS---VKVHKKGVNDLAVHH---SGKLALTVGRDDCLAMVNLVRGRR-------SFYHKIGKEASLIKFDGS 182 (343)
Q Consensus 120 ----~~~~~~---~~~~~~~v~~i~~~~---~~~~l~~~~~d~~i~~wd~~~~~~-------~~~~~~~~~~~~~~~~~~ 182 (343)
|..+.. +. ....|.++...+ +..+|+.++..|.++-..+..-.. .....-...+..+.....
T Consensus 82 r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~ 160 (370)
T 3l6v_A 82 SNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDG 160 (370)
T ss_dssp TTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECS
T ss_pred cccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCC
Confidence 222221 22 234555554432 356899999999999988754221 111112233333333333
Q ss_pred CC-EEEEEeCCcEEEEEccccee---------EEEecCCcceEEeeec--------------------------------
Q 019326 183 GE-KFFMVTEEKVGIHQAEDAKL---------LCELDGKKRILCAAPG-------------------------------- 220 (343)
Q Consensus 183 ~~-~~~~~~~~~i~~~d~~~~~~---------~~~~~~~~~i~~~~~~-------------------------------- 220 (343)
.. .++....|.+..+....-.. ...+.....|.++...
T Consensus 161 ~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~ 240 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDV 240 (370)
T ss_dssp CCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------------------
T ss_pred CceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccccccccccccccc
Confidence 34 44444788877776543211 1122233444444332
Q ss_pred ----CCCeEEEEeCCCcEEEEECCCC-------ceeE--EecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCCCcEE
Q 019326 221 ----ENGVLFTGGEDRSITAWDTNSG-------KVAY--CIEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSDGVIC 287 (343)
Q Consensus 221 ----~~~~l~~~~~dg~i~i~d~~~~-------~~~~--~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~ 287 (343)
.+..+++.+..|..+...+..- +=+. .+. ...+.+-.+.+..... .++..+..|.+.
T Consensus 241 ~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~-~~~g~lv~~~~v~~~d---------~i~liT~~G~~i 310 (370)
T 3l6v_A 241 ADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTT-ERNGKLVRAVLLGSTD---------EVMLISDGGTLV 310 (370)
T ss_dssp ------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCC-TTTCSEEEEEEECTTC---------EEEEEETTCCEE
T ss_pred ccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEec-CCCCcEEEEEEeCCCc---------eEEEEcCCCeEE
Confidence 2347888889999888876421 1112 222 1223444443333333 566666777776
Q ss_pred EEeccC
Q 019326 288 VWDVRM 293 (343)
Q Consensus 288 vwd~~~ 293 (343)
-..+..
T Consensus 311 R~~v~~ 316 (370)
T 3l6v_A 311 RTRGSE 316 (370)
T ss_dssp EEEGGG
T ss_pred EeeHhh
Confidence 666654
No 391
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=21.22 E-value=3.6e+02 Score=22.40 Aligned_cols=138 Identities=15% Similarity=0.157 Sum_probs=80.4
Q ss_pred eEEEEEcCCC--eeeeEeccC-----CCCCeEEEEEe---CCCCCCCCceEEEee-CCCeEEEEECCCcceeeeee----
Q 019326 63 TIHLYDLSTS--SSLGAIHHH-----ESSSVTSLAFY---TPQNLSVPRNLFSTS-ADGFVSIFDADPFVLLTSVK---- 127 (343)
Q Consensus 63 ~i~iwd~~~~--~~~~~~~~~-----~~~~v~~l~~~---~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~---- 127 (343)
.|.+||+.++ +.++.+.-. ....+..+++. +.+.-. ..++..+. ..+.|.|+|+.+++.-+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~-~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCS-ETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSC-SEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCC-ccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 5889999999 888877432 13567888887 220000 13444443 46789999998766443331
Q ss_pred ----------e----ccccEEEEEEecC----CCEEEEEeCCC-eEEEEE---ccCC---ceeEEEEcC---CcceEEEE
Q 019326 128 ----------V----HKKGVNDLAVHHS----GKLALTVGRDD-CLAMVN---LVRG---RRSFYHKIG---KEASLIKF 179 (343)
Q Consensus 128 ----------~----~~~~v~~i~~~~~----~~~l~~~~~d~-~i~~wd---~~~~---~~~~~~~~~---~~~~~~~~ 179 (343)
+ -...+..|+++|+ ++.|.-....+ .++-.. ++.. ..+...... .....+++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 0 0236888899887 56666555443 333333 1111 112222222 23345667
Q ss_pred e-CCCCEEEEE-eCCcEEEEEccc
Q 019326 180 D-GSGEKFFMV-TEEKVGIHQAED 201 (343)
Q Consensus 180 ~-~~~~~~~~~-~~~~i~~~d~~~ 201 (343)
+ .+|..+++- ..+.|..|+..+
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTS
T ss_pred eCCCCeEEEEeccCCeEEEEeCCC
Confidence 5 566666666 889999999865
No 392
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=21.06 E-value=3.9e+02 Score=22.75 Aligned_cols=186 Identities=9% Similarity=0.082 Sum_probs=0.0
Q ss_pred CCCeEEEEecCceEEEeeCCCeEEEEEc---------------CCCeeeeEeccCCCCCeEEEEEeCCCCCCCCceEEEe
Q 019326 42 LSPITTVAVSGTAAASGGTDDTIHLYDL---------------STSSSLGAIHHHESSSVTSLAFYTPQNLSVPRNLFST 106 (343)
Q Consensus 42 ~~~v~~l~~~~~~l~s~~~dg~i~iwd~---------------~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~ 106 (343)
...|..++......+.-..+|.|..|-. ........+.......|..++..... .++-
T Consensus 147 ~~~i~~va~G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~h-------s~al 219 (473)
T 3of7_A 147 GHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDH-------ILFL 219 (473)
T ss_dssp TCCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSE-------EEEE
T ss_pred CCcEEEEEccCCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCe-------EEEE
Q ss_pred eCCCeEEEEECCCcceeeeeeecc-------------ccEEEEEEecCCCEEEEEeCCCeEEEEEccCC-----------
Q 019326 107 SADGFVSIFDADPFVLLTSVKVHK-------------KGVNDLAVHHSGKLALTVGRDDCLAMVNLVRG----------- 162 (343)
Q Consensus 107 ~~dg~i~iwd~~~~~~~~~~~~~~-------------~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~~~----------- 162 (343)
..+|.|+.|-....-.+..-.... ..|..|+.... +.+....+|.|+.|-....
T Consensus 220 t~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~p~~~~~~~v~~Ia~G~~--hs~alt~~G~v~~wG~n~~GqlG~~~~~~~ 297 (473)
T 3of7_A 220 DEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGEN--HCFALTKDNKLVSWGLNQFGQCGVSEDVED 297 (473)
T ss_dssp ETTSCEEEEECCTTSTTSSCCCGGGTTTTCSCEECSCCSEEEEEECSS--EEEEEETTSCEEEEEECTTSTTCCCSCCCT
T ss_pred eCCCeEEEEeCCCCCCCCCCccccccccccCceecCCcceEEEecCCC--eEEEEecCCCEEEeCCCCCCCcCCCCcccC
Q ss_pred ----ceeEEEEcCCcceEEEEeCCCCEEEEE-eCCcEEEEEcccc-------------------------eeEEEecCCc
Q 019326 163 ----RRSFYHKIGKEASLIKFDGSGEKFFMV-TEEKVGIHQAEDA-------------------------KLLCELDGKK 212 (343)
Q Consensus 163 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~-------------------------~~~~~~~~~~ 212 (343)
................+.......++. .++.+..|-.... .....+....
T Consensus 298 ~~~~~~P~~v~~~~~~~i~~ia~G~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~ 377 (473)
T 3of7_A 298 GALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVP 377 (473)
T ss_dssp TCEEEEEEECCCCTTCCEEEEEECSSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECCSSC
T ss_pred CceeeccccccccCCccEEEEEeCCCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccCCCC
Q ss_pred ceEEeeecCCCeEEEEeCCCcEEEE
Q 019326 213 RILCAAPGENGVLFTGGEDRSITAW 237 (343)
Q Consensus 213 ~i~~~~~~~~~~l~~~~~dg~i~i~ 237 (343)
.|..++. .....++-..+|.|+.|
T Consensus 378 ~v~~Ia~-G~~hs~al~~~G~vy~w 401 (473)
T 3of7_A 378 KFKSVAA-GSHHSVAVAQNGIAYSW 401 (473)
T ss_dssp CEEEEEE-CSSEEEEEETTSCEEEE
T ss_pred ceEEEEe-CCCeEEEEeCCCcEEEe
No 393
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=21.05 E-value=4.8e+02 Score=23.86 Aligned_cols=228 Identities=6% Similarity=0.042 Sum_probs=0.0
Q ss_pred eEEEEec-CceEEEeeCCCe----EEEEEcCCCeeeeEeccCCCCCeE-------------EE-EEeCCCCCCCCceEEE
Q 019326 45 ITTVAVS-GTAAASGGTDDT----IHLYDLSTSSSLGAIHHHESSSVT-------------SL-AFYTPQNLSVPRNLFS 105 (343)
Q Consensus 45 v~~l~~~-~~~l~s~~~dg~----i~iwd~~~~~~~~~~~~~~~~~v~-------------~l-~~~~~~~~~~~~~l~s 105 (343)
+.|+.-. ...+++-+..|. ++++|+.+++.+ ...+. ++ +|..++ ..+++
T Consensus 134 ~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~-------~~~~~~~~k~~~~~~~~~~~~~W~d~~-----~~~~~ 201 (711)
T 4hvt_A 134 VSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFV-------KNGFEPITNSGKLLEGKFTYPTWINKD-----TIIFN 201 (711)
T ss_dssp EEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEEC-------TTCSCCBCTTCCBCCEETCCEEEEETT-----EEEEC
T ss_pred eeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcC-------CCCcccccccccccccccceeeEECCC-----EEEEE
Q ss_pred e----------eCCCeEEEEECCCcceeeeeeeccc---cEEEEEEecCCC-----EEEEEe---CCCeEEEEEccCCce
Q 019326 106 T----------SADGFVSIFDADPFVLLTSVKVHKK---GVNDLAVHHSGK-----LALTVG---RDDCLAMVNLVRGRR 164 (343)
Q Consensus 106 ~----------~~dg~i~iwd~~~~~~~~~~~~~~~---~v~~i~~~~~~~-----~l~~~~---~d~~i~~wd~~~~~~ 164 (343)
. +....|+.|.+-+...-..+--... .-.+...+++++ .+++.+ ....+.+.|......
T Consensus 202 ~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 281 (711)
T 4hvt_A 202 LVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNL 281 (711)
T ss_dssp CCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSC
T ss_pred eCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCC
Q ss_pred eEEEEcCCcceEEEEeCCCCEEEEE-----------eCCcEEEEEcccc----------eeEEEecCCcceEEeeecCCC
Q 019326 165 SFYHKIGKEASLIKFDGSGEKFFMV-----------TEEKVGIHQAEDA----------KLLCELDGKKRILCAAPGENG 223 (343)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~i~~~d~~~~----------~~~~~~~~~~~i~~~~~~~~~ 223 (343)
....-....-..+.....+..++.. ..+.|...++.++ +.+........+..+.+..+.
T Consensus 282 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 361 (711)
T 4hvt_A 282 KLQKINMPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDR 361 (711)
T ss_dssp EEEECCSCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSC
T ss_pred cceEeecCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCE
Q ss_pred eEEEEeCCC--cEEEEECCCCc-eeEE-ecccccccEEEEEEEecCCCCCCCCCCeEEEEEcCC---CcEEEEecc
Q 019326 224 VLFTGGEDR--SITAWDTNSGK-VAYC-IEDAHSARVKGIVVLTKNDGGSTAENPYLVASASSD---GVICVWDVR 292 (343)
Q Consensus 224 ~l~~~~~dg--~i~i~d~~~~~-~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~d---g~i~vwd~~ 292 (343)
++++...++ .|.++|+.+++ .... +.......+......+++.. ++++.+.. +.+..+|+.
T Consensus 362 l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~--------~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 362 VFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEE--------ALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSC--------EEEEEECSSSCCEEEEECTT
T ss_pred EEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCE--------EEEEEecCCCCCEEEEEeCC
No 394
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=20.98 E-value=3.5e+02 Score=22.28 Aligned_cols=59 Identities=8% Similarity=0.189 Sum_probs=38.0
Q ss_pred eCC--cEEEEEcccceeEEEec----CCc---ce-EEeeec-CCCeEEEEeCCCcEEEEECCCCceeEEec
Q 019326 190 TEE--KVGIHQAEDAKLLCELD----GKK---RI-LCAAPG-ENGVLFTGGEDRSITAWDTNSGKVAYCIE 249 (343)
Q Consensus 190 ~~~--~i~~~d~~~~~~~~~~~----~~~---~i-~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 249 (343)
... .+.++|+.+.++...+. ++. .+ .++... .+..++++-....|.++|.. |+.+..+.
T Consensus 48 ~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~-G~~~~k~~ 117 (369)
T 3s9j_A 48 QKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQ-GEIIRNYN 117 (369)
T ss_dssp STTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTT-CCEEEEEE
T ss_pred CCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECCC-ceEEEEEe
Confidence 345 89999999999998876 222 23 234333 34555555566678888876 66666543
No 395
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=20.69 E-value=3.3e+02 Score=23.89 Aligned_cols=67 Identities=15% Similarity=0.167 Sum_probs=42.1
Q ss_pred CCeEEEEec----CceEEEeeCCCeEEEEEcCCC----eeeeEeccCC-CCCeE-EEEEeCCCCCCCCceEEEeeCCCeE
Q 019326 43 SPITTVAVS----GTAAASGGTDDTIHLYDLSTS----SSLGAIHHHE-SSSVT-SLAFYTPQNLSVPRNLFSTSADGFV 112 (343)
Q Consensus 43 ~~v~~l~~~----~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~-~~~v~-~l~~~~~~~~~~~~~l~s~~~dg~i 112 (343)
...++|+.. -..++.|..+|.|.-..+... ..+.++.-.. ..+|. .|.++++. ..|++++..+.+
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~-----~~Lyv~s~~~V~ 474 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQ-----LYLYVMSERQVT 474 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTS-----SEEEEECSSEEE
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCC-----CeEEEEeccccc
Confidence 356777665 245778899998766555432 1233332221 45775 88999877 688888877655
Q ss_pred EE
Q 019326 113 SI 114 (343)
Q Consensus 113 ~i 114 (343)
+|
T Consensus 475 kv 476 (539)
T 3al9_A 475 RV 476 (539)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 396
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.42 E-value=4.9e+02 Score=23.66 Aligned_cols=66 Identities=17% Similarity=0.323 Sum_probs=41.1
Q ss_pred CCeEEEEec------C--ceEEEeeCCCeEE-EEEcCCCe-------eeeEec--cCCCCCeEEEEEeCCCCCCCCceEE
Q 019326 43 SPITTVAVS------G--TAAASGGTDDTIH-LYDLSTSS-------SLGAIH--HHESSSVTSLAFYTPQNLSVPRNLF 104 (343)
Q Consensus 43 ~~v~~l~~~------~--~~l~s~~~dg~i~-iwd~~~~~-------~~~~~~--~~~~~~v~~l~~~~~~~~~~~~~l~ 104 (343)
...+.|+.+ + ..++.|..+|.|. +....... .+.+++ .. ..+|..|.++++. ..|+
T Consensus 412 ~~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~-~~pI~~L~ld~~~-----~~LY 485 (667)
T 4gz8_A 412 YQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFRE-PTTISAMELSTKQ-----QQLY 485 (667)
T ss_dssp CCEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSS-CCCCCEEEEETTT-----TEEE
T ss_pred cceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCC-CceeeeEEEcCCC-----CEEE
Confidence 345666664 2 3577888999875 33222111 122222 23 5789999999988 7899
Q ss_pred EeeCCCeEEE
Q 019326 105 STSADGFVSI 114 (343)
Q Consensus 105 s~~~dg~i~i 114 (343)
+++.++.++|
T Consensus 486 V~t~~~V~kV 495 (667)
T 4gz8_A 486 IGSTAGVAQL 495 (667)
T ss_dssp EEBSSCEEEE
T ss_pred EEECCEEEEE
Confidence 9988876654
No 397
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=20.23 E-value=3.7e+02 Score=22.24 Aligned_cols=187 Identities=13% Similarity=0.136 Sum_probs=100.1
Q ss_pred CCeEEEEecCceEEEeeCCCeEEEEEc--CC-Cee-----------eeEeccCCCCCeEEEEEeCCCCCCCCceEEEeeC
Q 019326 43 SPITTVAVSGTAAASGGTDDTIHLYDL--ST-SSS-----------LGAIHHHESSSVTSLAFYTPQNLSVPRNLFSTSA 108 (343)
Q Consensus 43 ~~v~~l~~~~~~l~s~~~dg~i~iwd~--~~-~~~-----------~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~s~~~ 108 (343)
..|..++......+.-..||.|..|-. .. +++ ...+ .. ...|..++.-. ...++-..
T Consensus 111 ~~i~~va~G~~hs~alt~~G~v~~wG~~~n~~GqlG~~~~~~~~~~P~~v-~~-~~~i~~ia~G~-------~hs~alt~ 181 (413)
T 1a12_A 111 EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV-QL-DVPVVKVASGN-------DHLVMLTA 181 (413)
T ss_dssp SCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE-CC-SSCEEEEEECS-------SEEEEEET
T ss_pred CcEEEEecCCCeEEEEcCCCcEEEeeCCcCCCCccCcCCccccccCCEEe-cC-CCCEEEEEecC-------ceEEEEcC
Confidence 468888777666677788999999975 21 111 1111 12 35676676543 34566678
Q ss_pred CCeEEEEECCCc-ce--------------------e-eeeee------ccccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 019326 109 DGFVSIFDADPF-VL--------------------L-TSVKV------HKKGVNDLAVHHSGKLALTVGRDDCLAMVNLV 160 (343)
Q Consensus 109 dg~i~iwd~~~~-~~--------------------~-~~~~~------~~~~v~~i~~~~~~~~l~~~~~d~~i~~wd~~ 160 (343)
||.|+.|-.... ++ . ..+.. ....|..++.... +.+....+|.|+.|-..
T Consensus 182 ~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~~--hs~alt~~G~v~~wG~n 259 (413)
T 1a12_A 182 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAY--FTFAISHEGHVYGFGLS 259 (413)
T ss_dssp TSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETT--EEEEEETTCCEEEEECC
T ss_pred CCCEEEeeCCCCCccCCCccccccccccccccccccCceEeeccccccCCccEEEEEeCCC--EEEEEeCCCCEEEEeCC
Confidence 999999975321 10 0 00110 1235666766544 44555688999999764
Q ss_pred CCc---------eeEEEEcC--Cc--ceEEEEeCCCCEEEEE-eCCcEEEEEcccc------------eeEEEecCCcce
Q 019326 161 RGR---------RSFYHKIG--KE--ASLIKFDGSGEKFFMV-TEEKVGIHQAEDA------------KLLCELDGKKRI 214 (343)
Q Consensus 161 ~~~---------~~~~~~~~--~~--~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~------------~~~~~~~~~~~i 214 (343)
..- ........ .. .....++....+.++. .++.+..|-.... .....+.....|
T Consensus 260 ~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~~v 339 (413)
T 1a12_A 260 NYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAV 339 (413)
T ss_dssp TTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSSSSE
T ss_pred CCcCCCCCCCCcccccEEchhccCCCceEEEEecccceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecccCce
Confidence 321 11111111 11 1123333333343333 7888888864321 111122222366
Q ss_pred EEeeecCCCeEEEEeCCCcEEEEECCC
Q 019326 215 LCAAPGENGVLFTGGEDRSITAWDTNS 241 (343)
Q Consensus 215 ~~~~~~~~~~l~~~~~dg~i~i~d~~~ 241 (343)
..++. .....++-..||.|+.|-...
T Consensus 340 ~~v~~-G~~hs~alt~~G~v~~wG~n~ 365 (413)
T 1a12_A 340 SSVAC-GASVGYAVTKDGRVFAWGMGT 365 (413)
T ss_dssp EEEEE-CSSEEEEEETTSCEEEEECCT
T ss_pred eEEEE-CcceEEEEeCCCCEEEecCCC
Confidence 66666 344555566899999997643
Done!