Query 019328
Match_columns 342
No_of_seqs 294 out of 2081
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 14:24:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019328.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019328hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2n_A D-isomer specific 2-hyd 100.0 9.4E-73 3.2E-77 541.7 37.5 307 12-341 25-332 (345)
2 3kb6_A D-lactate dehydrogenase 100.0 1.6E-71 5.4E-76 532.0 29.1 297 16-341 1-315 (334)
3 4e5n_A Thermostable phosphite 100.0 9.5E-70 3.3E-74 519.1 34.3 304 15-341 2-313 (330)
4 3k5p_A D-3-phosphoglycerate de 100.0 3.7E-69 1.3E-73 526.2 35.4 303 10-341 10-318 (416)
5 4dgs_A Dehydrogenase; structur 100.0 5.8E-70 2E-74 521.4 28.3 301 12-341 27-327 (340)
6 1sc6_A PGDH, D-3-phosphoglycer 100.0 1.9E-68 6.4E-73 522.4 34.3 301 12-341 1-307 (404)
7 2yq5_A D-isomer specific 2-hyd 100.0 1.4E-68 4.9E-73 512.3 28.4 301 15-341 1-319 (343)
8 3jtm_A Formate dehydrogenase, 100.0 1.5E-67 5.1E-72 507.0 29.4 292 29-341 32-326 (351)
9 3evt_A Phosphoglycerate dehydr 100.0 5.3E-68 1.8E-72 505.3 25.8 294 15-341 1-297 (324)
10 3gg9_A D-3-phosphoglycerate de 100.0 6.3E-67 2.1E-71 503.1 32.5 303 15-341 2-321 (352)
11 3hg7_A D-isomer specific 2-hyd 100.0 2.6E-67 9E-72 499.9 27.7 293 14-341 4-298 (324)
12 2pi1_A D-lactate dehydrogenase 100.0 7.2E-67 2.5E-71 499.8 26.4 298 16-341 1-315 (334)
13 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 1.1E-65 3.8E-70 491.5 34.4 302 12-341 23-324 (335)
14 4hy3_A Phosphoglycerate oxidor 100.0 1.2E-66 4.1E-71 502.2 27.3 306 8-341 20-335 (365)
15 1gdh_A D-glycerate dehydrogena 100.0 2.3E-64 8E-69 480.4 37.3 304 15-341 1-306 (320)
16 2cuk_A Glycerate dehydrogenase 100.0 1.4E-64 4.7E-69 480.1 35.0 297 16-341 1-298 (311)
17 1wwk_A Phosphoglycerate dehydr 100.0 1.1E-64 3.9E-69 480.0 33.7 300 14-341 2-302 (307)
18 1j4a_A D-LDH, D-lactate dehydr 100.0 7.8E-65 2.7E-69 486.2 31.2 300 16-341 2-318 (333)
19 1dxy_A D-2-hydroxyisocaproate 100.0 2.9E-65 1E-69 489.0 28.2 299 16-341 1-316 (333)
20 1xdw_A NAD+-dependent (R)-2-hy 100.0 9.7E-65 3.3E-69 485.1 31.6 301 16-341 1-318 (331)
21 2ekl_A D-3-phosphoglycerate de 100.0 4E-64 1.4E-68 477.4 34.0 297 15-341 5-304 (313)
22 2nac_A NAD-dependent formate d 100.0 1.3E-64 4.3E-69 492.5 29.6 292 29-341 59-353 (393)
23 2j6i_A Formate dehydrogenase; 100.0 1.6E-64 5.3E-69 489.1 25.7 306 14-341 16-332 (364)
24 3pp8_A Glyoxylate/hydroxypyruv 100.0 1.7E-63 5.7E-68 472.8 27.8 288 14-341 2-297 (315)
25 3ba1_A HPPR, hydroxyphenylpyru 100.0 1.6E-62 5.3E-67 469.6 32.9 299 13-341 21-320 (333)
26 2gcg_A Glyoxylate reductase/hy 100.0 2.3E-61 7.8E-66 461.8 36.3 309 12-341 5-316 (330)
27 1mx3_A CTBP1, C-terminal bindi 100.0 1E-61 3.6E-66 466.2 29.9 305 12-341 18-330 (347)
28 2dbq_A Glyoxylate reductase; D 100.0 1.1E-60 3.7E-65 457.8 33.3 304 15-341 2-309 (334)
29 2d0i_A Dehydrogenase; structur 100.0 8.1E-61 2.8E-65 458.3 31.3 299 15-341 2-305 (333)
30 3oet_A Erythronate-4-phosphate 100.0 2.5E-61 8.6E-66 466.1 27.1 273 14-341 2-278 (381)
31 2w2k_A D-mandelate dehydrogena 100.0 4.7E-61 1.6E-65 462.6 28.1 306 14-341 2-325 (348)
32 1qp8_A Formate dehydrogenase; 100.0 1.4E-60 4.9E-65 450.9 24.2 279 16-341 1-283 (303)
33 1ygy_A PGDH, D-3-phosphoglycer 100.0 1.3E-58 4.4E-63 468.1 33.1 299 14-341 3-301 (529)
34 3gvx_A Glycerate dehydrogenase 100.0 3.8E-59 1.3E-63 437.7 21.7 243 62-341 34-277 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 9.3E-58 3.2E-62 442.1 26.2 271 16-341 1-275 (380)
36 3d64_A Adenosylhomocysteinase; 100.0 1.1E-36 3.7E-41 302.8 5.2 213 87-341 214-433 (494)
37 1v8b_A Adenosylhomocysteinase; 100.0 2.3E-36 8E-41 299.3 6.9 215 87-341 194-416 (479)
38 3d4o_A Dipicolinate synthase s 100.0 6.1E-30 2.1E-34 240.2 16.1 215 14-276 4-248 (293)
39 2rir_A Dipicolinate synthase, 99.9 8.9E-27 3.1E-31 219.3 16.2 224 11-276 2-250 (300)
40 3ce6_A Adenosylhomocysteinase; 99.9 7.9E-26 2.7E-30 225.3 6.2 211 89-340 214-432 (494)
41 2vhw_A Alanine dehydrogenase; 99.9 2.1E-23 7.1E-28 202.4 20.3 255 29-328 22-308 (377)
42 1gtm_A Glutamate dehydrogenase 99.8 1.7E-22 5.8E-27 197.8 0.4 150 160-340 206-381 (419)
43 2eez_A Alanine dehydrogenase; 99.8 1.7E-18 5.7E-23 167.4 19.3 271 29-340 22-327 (369)
44 3h9u_A Adenosylhomocysteinase; 99.8 1E-18 3.5E-23 170.5 15.4 157 92-285 154-312 (436)
45 1x13_A NAD(P) transhydrogenase 99.8 2E-18 6.8E-23 168.6 14.1 237 29-279 29-301 (401)
46 3n58_A Adenosylhomocysteinase; 99.7 9.3E-18 3.2E-22 163.6 14.4 156 92-284 190-347 (464)
47 1l7d_A Nicotinamide nucleotide 99.7 4.4E-17 1.5E-21 158.2 16.3 239 29-277 22-301 (384)
48 3gvp_A Adenosylhomocysteinase 99.7 1.8E-16 6.2E-21 154.3 13.6 154 93-283 164-319 (435)
49 1gpj_A Glutamyl-tRNA reductase 99.7 4.4E-18 1.5E-22 166.4 1.6 197 88-330 83-298 (404)
50 3doj_A AT3G25530, dehydrogenas 99.4 8.8E-13 3E-17 124.1 8.4 119 159-292 15-135 (310)
51 3obb_A Probable 3-hydroxyisobu 99.4 9.8E-13 3.4E-17 123.5 8.0 112 166-292 4-117 (300)
52 1c1d_A L-phenylalanine dehydro 99.4 3.6E-12 1.2E-16 121.9 12.0 109 162-293 172-281 (355)
53 3qsg_A NAD-binding phosphogluc 99.3 6.5E-12 2.2E-16 118.3 11.8 131 142-289 2-134 (312)
54 3l6d_A Putative oxidoreductase 99.3 1.8E-12 6.1E-17 121.8 7.8 117 161-292 5-121 (306)
55 3p2y_A Alanine dehydrogenase/p 99.3 2.6E-10 8.9E-15 109.8 22.6 249 11-278 18-310 (381)
56 4gbj_A 6-phosphogluconate dehy 99.3 2.2E-12 7.5E-17 120.9 7.9 114 166-294 6-119 (297)
57 3ggo_A Prephenate dehydrogenas 99.3 2.1E-11 7.2E-16 115.1 13.7 156 162-335 30-192 (314)
58 4dll_A 2-hydroxy-3-oxopropiona 99.3 6.6E-12 2.3E-16 118.7 9.2 116 162-292 28-144 (320)
59 2g5c_A Prephenate dehydrogenas 99.3 4E-11 1.4E-15 110.7 13.4 150 166-333 2-158 (281)
60 4e12_A Diketoreductase; oxidor 99.3 7.7E-11 2.6E-15 109.4 14.9 157 166-335 5-173 (283)
61 4e21_A 6-phosphogluconate dehy 99.3 1.9E-11 6.5E-16 117.4 10.8 123 162-301 19-144 (358)
62 2d5c_A AROE, shikimate 5-dehyd 99.3 2.1E-11 7.1E-16 112.0 10.6 197 30-290 21-222 (263)
63 3pef_A 6-phosphogluconate dehy 99.2 1.1E-11 3.7E-16 115.2 7.5 112 166-292 2-115 (287)
64 3qha_A Putative oxidoreductase 99.2 8.8E-12 3E-16 116.5 6.9 111 165-292 15-125 (296)
65 3pdu_A 3-hydroxyisobutyrate de 99.2 1E-11 3.5E-16 115.3 5.4 112 166-292 2-115 (287)
66 3g0o_A 3-hydroxyisobutyrate de 99.2 1.3E-11 4.5E-16 115.6 6.1 112 165-291 7-121 (303)
67 3ond_A Adenosylhomocysteinase; 99.2 1.6E-10 5.5E-15 114.3 13.9 154 92-282 208-363 (488)
68 2h78_A Hibadh, 3-hydroxyisobut 99.2 4E-11 1.4E-15 111.9 8.0 111 166-291 4-116 (302)
69 4ezb_A Uncharacterized conserv 99.2 6.7E-11 2.3E-15 111.7 9.3 124 165-302 24-151 (317)
70 3dtt_A NADP oxidoreductase; st 99.2 3E-11 1E-15 109.8 6.4 109 149-273 3-125 (245)
71 4gwg_A 6-phosphogluconate dehy 99.1 1.1E-10 3.8E-15 116.1 10.8 125 165-300 4-131 (484)
72 4dio_A NAD(P) transhydrogenase 99.1 1.8E-10 6E-15 111.8 10.8 233 29-279 47-321 (405)
73 2pv7_A T-protein [includes: ch 99.1 1.3E-10 4.4E-15 108.7 9.4 120 164-321 20-142 (298)
74 2hk9_A Shikimate dehydrogenase 99.1 1.5E-10 5.1E-15 107.1 9.3 184 31-273 33-222 (275)
75 3b1f_A Putative prephenate deh 99.1 4.4E-10 1.5E-14 104.2 11.0 143 165-323 6-157 (290)
76 1np3_A Ketol-acid reductoisome 99.1 2.6E-11 8.8E-16 115.6 2.5 137 161-322 12-155 (338)
77 3ktd_A Prephenate dehydrogenas 99.0 1.8E-10 6E-15 109.9 6.1 138 166-322 9-154 (341)
78 1vpd_A Tartronate semialdehyde 99.0 3.9E-10 1.3E-14 104.8 7.7 110 166-290 6-117 (299)
79 3cky_A 2-hydroxymethyl glutara 99.0 4.2E-10 1.4E-14 104.7 7.7 109 166-289 5-115 (301)
80 2zyd_A 6-phosphogluconate dehy 99.0 8.1E-10 2.8E-14 110.0 9.8 118 162-291 12-132 (480)
81 2gf2_A Hibadh, 3-hydroxyisobut 99.0 5.5E-10 1.9E-14 103.6 7.0 108 166-288 1-110 (296)
82 1zej_A HBD-9, 3-hydroxyacyl-CO 99.0 1.1E-09 3.8E-14 102.2 9.1 149 162-334 9-158 (293)
83 3k6j_A Protein F01G10.3, confi 99.0 4.5E-09 1.6E-13 103.8 13.1 194 115-335 11-218 (460)
84 1leh_A Leucine dehydrogenase; 99.0 2.5E-09 8.5E-14 102.7 10.7 108 162-291 170-278 (364)
85 1yb4_A Tartronic semialdehyde 99.0 5E-10 1.7E-14 103.8 5.6 108 166-289 4-113 (295)
86 2f1k_A Prephenate dehydrogenas 98.9 6E-09 2E-13 95.8 12.1 149 166-334 1-153 (279)
87 2uyy_A N-PAC protein; long-cha 98.9 1.4E-09 4.8E-14 102.1 7.8 110 166-290 31-142 (316)
88 2p4q_A 6-phosphogluconate dehy 98.9 2.2E-09 7.6E-14 107.3 9.7 116 165-291 10-128 (497)
89 2cvz_A Dehydrogenase, 3-hydrox 98.9 9.1E-10 3.1E-14 101.6 6.3 106 166-289 2-107 (289)
90 2q3e_A UDP-glucose 6-dehydroge 98.9 5E-09 1.7E-13 103.9 11.2 147 166-317 6-181 (467)
91 2yjz_A Metalloreductase steap4 98.4 1.8E-10 6.2E-15 101.8 0.0 94 163-277 17-110 (201)
92 2iz1_A 6-phosphogluconate dehy 98.9 3.7E-09 1.3E-13 105.1 9.1 115 166-292 6-123 (474)
93 2dpo_A L-gulonate 3-dehydrogen 98.9 1.2E-08 4E-13 96.5 11.7 156 165-333 6-173 (319)
94 2pgd_A 6-phosphogluconate dehy 98.8 4.5E-09 1.5E-13 104.7 8.4 116 166-292 3-121 (482)
95 3oj0_A Glutr, glutamyl-tRNA re 98.8 1.7E-08 5.9E-13 83.7 10.3 93 165-275 21-113 (144)
96 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.8 1.1E-08 3.8E-13 101.8 10.5 119 166-292 2-123 (478)
97 1i36_A Conserved hypothetical 98.8 5.5E-09 1.9E-13 95.3 7.0 103 166-289 1-105 (264)
98 3fr7_A Putative ketol-acid red 98.8 4E-09 1.4E-13 103.9 5.9 102 161-275 49-157 (525)
99 3d1l_A Putative NADP oxidoredu 98.8 7.1E-09 2.4E-13 94.7 7.0 103 161-279 6-109 (266)
100 1pjc_A Protein (L-alanine dehy 98.7 5.5E-07 1.9E-11 86.3 17.6 225 29-273 22-268 (361)
101 2i99_A MU-crystallin homolog; 98.7 7.9E-08 2.7E-12 90.4 11.1 96 164-276 134-230 (312)
102 2ahr_A Putative pyrroline carb 98.7 1.8E-07 6.2E-12 84.9 12.9 102 166-289 4-105 (259)
103 2vns_A Metalloreductase steap3 98.7 3.2E-08 1.1E-12 87.9 7.3 95 164-278 27-121 (215)
104 3gt0_A Pyrroline-5-carboxylate 98.7 4.5E-08 1.5E-12 88.7 8.4 105 166-288 3-111 (247)
105 1f0y_A HCDH, L-3-hydroxyacyl-C 98.7 2E-07 7E-12 86.8 13.1 156 166-334 16-187 (302)
106 2raf_A Putative dinucleotide-b 98.7 2.1E-08 7.1E-13 88.8 5.7 80 161-276 15-94 (209)
107 3pid_A UDP-glucose 6-dehydroge 98.6 1.2E-07 4.1E-12 92.9 11.0 124 159-289 30-170 (432)
108 2izz_A Pyrroline-5-carboxylate 98.6 1.8E-07 6.2E-12 88.1 10.8 108 163-288 20-132 (322)
109 3c24_A Putative oxidoreductase 98.6 8.6E-08 2.9E-12 88.6 8.2 92 166-275 12-104 (286)
110 3tri_A Pyrroline-5-carboxylate 98.6 6.1E-07 2.1E-11 82.9 13.4 112 165-294 3-119 (280)
111 3mog_A Probable 3-hydroxybutyr 98.6 3.6E-07 1.2E-11 91.0 12.2 155 165-334 5-171 (483)
112 3p2o_A Bifunctional protein fo 98.6 1.9E-06 6.4E-11 79.6 16.0 171 32-276 57-236 (285)
113 3gg2_A Sugar dehydrogenase, UD 98.5 7.1E-07 2.4E-11 88.0 11.5 119 166-288 3-138 (450)
114 1mv8_A GMD, GDP-mannose 6-dehy 98.5 4.3E-07 1.5E-11 89.2 9.3 120 166-288 1-140 (436)
115 1yqg_A Pyrroline-5-carboxylate 98.4 2.2E-07 7.6E-12 84.4 6.7 101 166-289 1-103 (263)
116 4a7p_A UDP-glucose dehydrogena 98.4 1.1E-06 3.9E-11 86.5 11.9 120 166-289 9-146 (446)
117 3k96_A Glycerol-3-phosphate de 98.4 1.4E-06 4.7E-11 83.5 11.4 118 165-287 29-152 (356)
118 1jay_A Coenzyme F420H2:NADP+ o 98.4 1E-06 3.5E-11 77.4 9.2 124 166-304 1-137 (212)
119 1zcj_A Peroxisomal bifunctiona 98.4 2E-06 6.8E-11 85.2 12.2 130 165-299 37-174 (463)
120 2rcy_A Pyrroline carboxylate r 98.4 6.3E-07 2.2E-11 81.3 7.9 99 165-289 4-106 (262)
121 1bg6_A N-(1-D-carboxylethyl)-L 98.4 1.2E-06 4E-11 83.0 9.9 118 166-288 5-124 (359)
122 1b0a_A Protein (fold bifunctio 98.4 1.1E-06 3.7E-11 81.2 9.1 80 161-276 155-235 (288)
123 4a5o_A Bifunctional protein fo 98.4 1.8E-06 6.3E-11 79.6 10.3 171 31-276 58-237 (286)
124 1x0v_A GPD-C, GPDH-C, glycerol 98.3 1.1E-06 3.7E-11 83.4 9.0 108 165-277 8-129 (354)
125 3don_A Shikimate dehydrogenase 98.3 1.3E-06 4.5E-11 80.7 9.1 110 162-289 114-226 (277)
126 2o3j_A UDP-glucose 6-dehydroge 98.3 2.2E-06 7.5E-11 85.2 11.3 121 166-288 10-151 (481)
127 2c2x_A Methylenetetrahydrofola 98.3 1.8E-06 6.3E-11 79.4 9.8 171 32-277 56-237 (281)
128 2wtb_A MFP2, fatty acid multif 98.3 1.3E-06 4.4E-11 91.1 9.7 128 166-300 313-452 (725)
129 1dlj_A UDP-glucose dehydrogena 98.3 2.1E-06 7.1E-11 83.5 10.4 116 166-289 1-134 (402)
130 3l07_A Bifunctional protein fo 98.3 1.9E-06 6.4E-11 79.6 9.5 169 32-275 58-236 (285)
131 1a4i_A Methylenetetrahydrofola 98.3 2E-06 6.9E-11 79.9 9.7 81 161-277 161-242 (301)
132 3u62_A Shikimate dehydrogenase 98.3 3.5E-06 1.2E-10 76.8 11.1 105 163-289 107-214 (253)
133 1wdk_A Fatty oxidation complex 98.3 1.7E-06 5.7E-11 90.1 10.1 155 165-334 314-480 (715)
134 3ngx_A Bifunctional protein fo 98.3 1.8E-06 6.2E-11 79.3 9.1 77 163-275 148-225 (276)
135 1y81_A Conserved hypothetical 98.3 6.7E-07 2.3E-11 74.1 5.6 104 162-292 11-118 (138)
136 1edz_A 5,10-methylenetetrahydr 98.3 1.3E-06 4.3E-11 82.2 7.9 97 159-274 171-277 (320)
137 1evy_A Glycerol-3-phosphate de 98.3 7.4E-07 2.5E-11 85.1 6.4 117 167-287 17-140 (366)
138 3g79_A NDP-N-acetyl-D-galactos 98.3 1.7E-06 5.7E-11 85.9 9.1 116 166-285 19-160 (478)
139 4a26_A Putative C-1-tetrahydro 98.3 2E-06 6.9E-11 79.9 8.9 173 31-276 60-243 (300)
140 2y0c_A BCEC, UDP-glucose dehyd 98.3 3.4E-06 1.2E-10 83.8 10.8 120 165-288 8-144 (478)
141 3ojo_A CAP5O; rossmann fold, c 98.3 2.4E-06 8.3E-11 83.7 9.5 112 162-287 8-144 (431)
142 1txg_A Glycerol-3-phosphate de 98.3 2.1E-06 7.3E-11 80.5 8.6 116 166-288 1-124 (335)
143 1yj8_A Glycerol-3-phosphate de 98.2 1.6E-06 5.5E-11 83.2 7.5 105 166-275 22-144 (375)
144 3hdj_A Probable ornithine cycl 98.2 6.8E-06 2.3E-10 77.2 10.4 95 164-274 120-215 (313)
145 4huj_A Uncharacterized protein 98.2 1.7E-06 5.8E-11 76.9 5.8 93 165-275 23-116 (220)
146 2egg_A AROE, shikimate 5-dehyd 98.2 1.3E-05 4.3E-10 74.8 12.0 114 162-289 138-255 (297)
147 1x7d_A Ornithine cyclodeaminas 98.2 1.3E-05 4.4E-10 76.5 12.1 100 164-274 128-228 (350)
148 3dfu_A Uncharacterized protein 98.2 4.1E-06 1.4E-10 75.3 8.1 69 166-272 7-75 (232)
149 2dc1_A L-aspartate dehydrogena 98.1 3.9E-06 1.3E-10 75.3 7.6 96 167-290 2-102 (236)
150 1z82_A Glycerol-3-phosphate de 98.1 6.2E-06 2.1E-10 77.8 8.7 112 165-287 14-127 (335)
151 2duw_A Putative COA-binding pr 98.1 1.2E-06 4E-11 73.2 3.2 103 165-294 13-121 (145)
152 2ew2_A 2-dehydropantoate 2-red 98.1 3.9E-06 1.3E-10 77.7 7.0 120 166-292 4-127 (316)
153 1ks9_A KPA reductase;, 2-dehyd 98.1 3.8E-06 1.3E-10 76.9 6.5 97 166-275 1-100 (291)
154 2i76_A Hypothetical protein; N 98.0 1.2E-06 4.2E-11 80.5 1.3 90 166-277 3-94 (276)
155 3c85_A Putative glutathione-re 98.0 3.1E-06 1.1E-10 72.6 3.7 100 161-273 35-140 (183)
156 1omo_A Alanine dehydrogenase; 98.0 5.7E-05 2E-09 71.1 12.0 94 164-273 124-218 (322)
157 3ado_A Lambda-crystallin; L-gu 98.0 7.7E-05 2.6E-09 70.2 12.7 159 165-332 6-175 (319)
158 2g1u_A Hypothetical protein TM 98.0 3.6E-05 1.2E-09 64.2 9.4 103 160-275 14-121 (155)
159 2qyt_A 2-dehydropantoate 2-red 97.9 8.2E-06 2.8E-10 75.8 5.8 117 166-290 9-134 (317)
160 3phh_A Shikimate dehydrogenase 97.9 1.9E-05 6.5E-10 72.6 7.9 106 165-289 118-224 (269)
161 2z2v_A Hypothetical protein PH 97.9 7.8E-06 2.7E-10 78.4 5.1 114 162-291 13-126 (365)
162 1lss_A TRK system potassium up 97.9 3.8E-05 1.3E-09 62.0 8.5 95 165-271 4-102 (140)
163 2qrj_A Saccharopine dehydrogen 97.9 1.8E-05 6.1E-10 76.3 6.8 83 164-272 213-300 (394)
164 1vl6_A Malate oxidoreductase; 97.9 8.1E-05 2.8E-09 71.4 11.3 103 160-275 187-297 (388)
165 3ulk_A Ketol-acid reductoisome 97.8 5E-05 1.7E-09 73.8 8.9 99 162-275 34-134 (491)
166 3i83_A 2-dehydropantoate 2-red 97.8 6.9E-05 2.3E-09 70.2 9.5 120 166-293 3-125 (320)
167 3o8q_A Shikimate 5-dehydrogena 97.8 6.5E-05 2.2E-09 69.4 8.5 113 162-289 123-237 (281)
168 3ghy_A Ketopantoate reductase 97.7 3.2E-05 1.1E-09 73.0 6.4 123 165-294 3-144 (335)
169 1nyt_A Shikimate 5-dehydrogena 97.7 0.00029 9.9E-09 64.5 12.6 113 162-289 116-230 (271)
170 3hn2_A 2-dehydropantoate 2-red 97.7 0.00014 4.8E-09 67.8 10.5 121 166-295 3-125 (312)
171 3hwr_A 2-dehydropantoate 2-red 97.7 7.2E-05 2.5E-09 70.1 8.5 117 163-287 17-134 (318)
172 1p77_A Shikimate 5-dehydrogena 97.7 7.8E-05 2.7E-09 68.4 8.5 114 162-289 116-231 (272)
173 3fwz_A Inner membrane protein 97.7 5E-05 1.7E-09 62.3 6.4 94 165-271 7-104 (140)
174 3uuw_A Putative oxidoreductase 97.7 0.00011 3.9E-09 68.1 9.5 109 165-291 6-118 (308)
175 3ic5_A Putative saccharopine d 97.7 4.7E-05 1.6E-09 59.5 5.6 96 164-272 4-100 (118)
176 3c7a_A Octopine dehydrogenase; 97.7 0.00011 3.9E-09 70.8 8.8 103 166-271 3-115 (404)
177 3vtf_A UDP-glucose 6-dehydroge 97.6 0.00027 9.1E-09 69.3 11.1 149 164-317 20-194 (444)
178 4hkt_A Inositol 2-dehydrogenas 97.6 0.00026 8.8E-09 66.4 9.8 67 166-246 4-73 (331)
179 3jyo_A Quinate/shikimate dehyd 97.6 0.00047 1.6E-08 63.7 11.3 119 162-289 124-245 (283)
180 2hmt_A YUAA protein; RCK, KTN, 97.6 0.00016 5.6E-09 58.4 7.3 100 163-275 4-107 (144)
181 1iuk_A Hypothetical protein TT 97.5 0.00016 5.6E-09 59.6 7.1 104 164-292 12-119 (140)
182 3pwz_A Shikimate dehydrogenase 97.5 0.00061 2.1E-08 62.6 11.5 113 161-289 116-231 (272)
183 4b4u_A Bifunctional protein fo 97.5 0.00034 1.2E-08 64.8 9.4 78 161-274 175-253 (303)
184 3llv_A Exopolyphosphatase-rela 97.5 0.00014 4.9E-09 59.2 6.2 93 164-269 5-101 (141)
185 3tnl_A Shikimate dehydrogenase 97.5 0.0005 1.7E-08 64.5 10.1 120 161-289 150-279 (315)
186 1guz_A Malate dehydrogenase; o 97.4 0.0004 1.4E-08 64.8 9.0 124 166-295 1-143 (310)
187 3dfz_A SIRC, precorrin-2 dehyd 97.4 0.00036 1.2E-08 62.2 8.0 97 160-273 26-122 (223)
188 1tlt_A Putative oxidoreductase 97.4 0.00052 1.8E-08 63.9 9.5 110 166-293 6-119 (319)
189 2d59_A Hypothetical protein PH 97.4 0.00034 1.2E-08 58.0 7.3 102 165-293 22-127 (144)
190 1id1_A Putative potassium chan 97.4 0.00023 8E-09 58.9 6.3 102 165-274 3-107 (153)
191 3fbt_A Chorismate mutase and s 97.4 0.00039 1.3E-08 64.2 8.2 108 162-289 119-230 (282)
192 2ewd_A Lactate dehydrogenase,; 97.4 0.00027 9.1E-09 66.2 7.1 117 165-286 4-135 (317)
193 3euw_A MYO-inositol dehydrogen 97.4 0.001 3.5E-08 62.5 11.1 68 166-246 5-75 (344)
194 1nvt_A Shikimate 5'-dehydrogen 97.4 0.00043 1.5E-08 63.8 8.1 117 162-288 125-244 (287)
195 2a9f_A Putative malic enzyme ( 97.3 0.00034 1.2E-08 67.3 7.2 166 109-322 156-329 (398)
196 3e9m_A Oxidoreductase, GFO/IDH 97.3 0.00081 2.8E-08 63.1 9.5 70 166-247 6-78 (330)
197 3c1a_A Putative oxidoreductase 97.3 0.0003 1E-08 65.5 6.5 106 166-291 11-121 (315)
198 2dvm_A Malic enzyme, 439AA lon 97.3 0.00061 2.1E-08 66.7 8.7 118 160-290 181-312 (439)
199 2ho3_A Oxidoreductase, GFO/IDH 97.3 0.0014 4.8E-08 61.1 10.7 68 166-245 2-71 (325)
200 4fgw_A Glycerol-3-phosphate de 97.3 0.00059 2E-08 65.8 8.2 107 167-275 36-154 (391)
201 3q2i_A Dehydrogenase; rossmann 97.3 0.00069 2.4E-08 64.1 8.6 69 165-246 13-85 (354)
202 3cea_A MYO-inositol 2-dehydrog 97.2 0.00097 3.3E-08 62.6 9.4 110 166-292 9-125 (346)
203 1pzg_A LDH, lactate dehydrogen 97.2 0.0011 3.6E-08 62.6 9.6 105 166-273 10-133 (331)
204 1xea_A Oxidoreductase, GFO/IDH 97.2 0.00093 3.2E-08 62.3 9.2 110 166-292 3-116 (323)
205 1hyh_A L-hicdh, L-2-hydroxyiso 97.2 0.0013 4.4E-08 61.2 10.0 77 166-247 2-80 (309)
206 3zwc_A Peroxisomal bifunctiona 97.2 0.0028 9.6E-08 66.0 13.4 155 165-329 316-478 (742)
207 2glx_A 1,5-anhydro-D-fructose 97.2 0.00096 3.3E-08 62.3 8.9 66 167-245 2-71 (332)
208 1a5z_A L-lactate dehydrogenase 97.2 0.0013 4.5E-08 61.6 9.8 122 166-294 1-140 (319)
209 3t4e_A Quinate/shikimate dehyd 97.2 0.0012 4.2E-08 61.7 9.2 118 162-289 145-273 (312)
210 3e18_A Oxidoreductase; dehydro 97.2 0.00095 3.3E-08 63.4 8.5 66 166-246 6-75 (359)
211 3q2o_A Phosphoribosylaminoimid 97.2 0.00087 3E-08 64.2 8.2 39 161-200 10-48 (389)
212 3db2_A Putative NADPH-dependen 97.1 0.0013 4.4E-08 62.2 8.9 68 166-247 6-77 (354)
213 2v6b_A L-LDH, L-lactate dehydr 97.1 0.00086 2.9E-08 62.4 7.3 123 166-294 1-138 (304)
214 3ec7_A Putative dehydrogenase; 97.1 0.0015 5.3E-08 61.9 9.1 72 164-246 22-97 (357)
215 3evn_A Oxidoreductase, GFO/IDH 97.1 0.001 3.4E-08 62.3 7.6 68 166-246 6-77 (329)
216 3g17_A Similar to 2-dehydropan 97.1 0.00012 4.1E-09 67.7 1.2 99 166-278 3-102 (294)
217 3rc1_A Sugar 3-ketoreductase; 97.1 0.0018 6.1E-08 61.3 9.3 70 164-246 26-99 (350)
218 3ezy_A Dehydrogenase; structur 97.1 0.0014 4.7E-08 61.7 8.3 69 166-246 3-74 (344)
219 3ego_A Probable 2-dehydropanto 97.1 0.00069 2.4E-08 63.0 6.1 116 166-293 3-119 (307)
220 3mz0_A Inositol 2-dehydrogenas 97.0 0.0018 6.3E-08 60.8 8.9 70 166-246 3-76 (344)
221 2hjr_A Malate dehydrogenase; m 97.0 0.0019 6.5E-08 60.8 8.9 104 166-273 15-132 (328)
222 3l4b_C TRKA K+ channel protien 97.0 0.00088 3E-08 58.8 6.2 97 166-271 1-98 (218)
223 3e82_A Putative oxidoreductase 97.0 0.0023 7.9E-08 60.8 9.4 65 166-246 8-77 (364)
224 1ydw_A AX110P-like protein; st 97.0 0.004 1.4E-07 58.9 10.9 113 166-292 7-124 (362)
225 1f06_A MESO-diaminopimelate D- 97.0 0.0019 6.3E-08 60.5 8.3 103 166-290 4-110 (320)
226 2ef0_A Ornithine carbamoyltran 97.0 0.15 5.1E-06 47.2 20.9 106 162-280 151-272 (301)
227 3fef_A Putative glucosidase LP 97.0 0.0023 7.8E-08 62.9 9.0 77 164-246 4-85 (450)
228 3m2t_A Probable dehydrogenase; 96.9 0.0019 6.6E-08 61.2 7.9 68 166-245 6-77 (359)
229 3bio_A Oxidoreductase, GFO/IDH 96.9 0.0014 4.9E-08 60.9 6.8 104 166-290 10-117 (304)
230 1t2d_A LDH-P, L-lactate dehydr 96.9 0.0036 1.2E-07 58.7 9.6 104 166-273 5-127 (322)
231 1vlv_A Otcase, ornithine carba 96.9 0.29 9.9E-06 45.8 22.6 114 162-279 164-295 (325)
232 1jw9_B Molybdopterin biosynthe 96.9 0.00035 1.2E-08 63.2 2.4 102 161-271 27-152 (249)
233 1duv_G Octase-1, ornithine tra 96.9 0.08 2.7E-06 49.8 18.5 191 31-272 64-274 (333)
234 1ldn_A L-lactate dehydrogenase 96.9 0.0025 8.5E-08 59.6 8.1 104 165-273 6-124 (316)
235 3qy9_A DHPR, dihydrodipicolina 96.8 0.0014 4.9E-08 59.1 6.1 82 166-275 4-86 (243)
236 1pvv_A Otcase, ornithine carba 96.8 0.31 1.1E-05 45.3 22.0 114 162-279 152-281 (315)
237 1obb_A Maltase, alpha-glucosid 96.8 0.0024 8.1E-08 63.2 7.9 128 165-295 3-174 (480)
238 1j5p_A Aspartate dehydrogenase 96.8 0.0026 8.8E-08 57.7 7.2 99 163-290 10-112 (253)
239 3l9w_A Glutathione-regulated p 96.7 0.0012 4E-08 64.2 5.0 93 165-270 4-100 (413)
240 3ohs_X Trans-1,2-dihydrobenzen 96.7 0.0043 1.5E-07 58.0 8.7 68 166-246 3-76 (334)
241 1lld_A L-lactate dehydrogenase 96.7 0.009 3.1E-07 55.3 10.7 105 164-275 6-127 (319)
242 2axq_A Saccharopine dehydrogen 96.7 0.0027 9.2E-08 62.7 7.3 81 159-247 17-99 (467)
243 3r7f_A Aspartate carbamoyltran 96.7 0.058 2E-06 50.1 15.8 93 162-272 144-250 (304)
244 4had_A Probable oxidoreductase 96.7 0.0048 1.6E-07 57.9 8.7 68 166-245 24-95 (350)
245 3aog_A Glutamate dehydrogenase 96.7 0.017 5.9E-07 56.3 12.6 118 160-292 230-358 (440)
246 2nu8_A Succinyl-COA ligase [AD 96.7 0.0024 8.2E-08 59.0 6.3 105 165-291 7-116 (288)
247 1npy_A Hypothetical shikimate 96.6 0.0074 2.5E-07 55.2 9.3 106 164-289 118-229 (271)
248 2aef_A Calcium-gated potassium 96.6 0.0035 1.2E-07 55.5 6.9 92 165-271 9-105 (234)
249 2i6u_A Otcase, ornithine carba 96.6 0.064 2.2E-06 49.8 15.7 114 162-279 145-275 (307)
250 3gd5_A Otcase, ornithine carba 96.6 0.28 9.5E-06 45.8 20.0 114 162-279 154-283 (323)
251 3vku_A L-LDH, L-lactate dehydr 96.6 0.0073 2.5E-07 56.8 9.1 105 163-273 7-126 (326)
252 3orq_A N5-carboxyaminoimidazol 96.5 0.0015 5.2E-08 62.4 4.2 38 162-200 9-46 (377)
253 3abi_A Putative uncharacterize 96.5 0.0031 1.1E-07 60.0 6.3 73 164-246 15-87 (365)
254 1pg5_A Aspartate carbamoyltran 96.5 0.032 1.1E-06 51.7 12.8 100 162-272 146-260 (299)
255 4a7p_A UDP-glucose dehydrogena 96.5 0.011 3.6E-07 58.1 9.9 103 160-282 317-430 (446)
256 2vt3_A REX, redox-sensing tran 96.5 0.0024 8.1E-08 56.6 4.8 68 166-246 86-155 (215)
257 3kux_A Putative oxidoreductase 96.5 0.0072 2.5E-07 57.0 8.4 67 166-247 8-78 (352)
258 1oju_A MDH, malate dehydrogena 96.5 0.011 3.7E-07 54.7 9.4 126 166-297 1-147 (294)
259 4amu_A Ornithine carbamoyltran 96.4 0.035 1.2E-06 52.8 12.9 107 162-272 177-300 (365)
260 2p2s_A Putative oxidoreductase 96.4 0.0058 2E-07 57.1 7.5 68 166-246 5-76 (336)
261 4fb5_A Probable oxidoreductase 96.4 0.006 2E-07 57.7 7.6 70 164-246 24-104 (393)
262 2w37_A Ornithine carbamoyltran 96.4 0.13 4.6E-06 48.6 16.7 107 162-272 173-295 (359)
263 3f4l_A Putative oxidoreductase 96.4 0.0031 1E-07 59.4 5.4 69 166-247 3-76 (345)
264 2tmg_A Protein (glutamate dehy 96.4 0.042 1.5E-06 53.2 13.3 118 160-292 204-333 (415)
265 1dxh_A Ornithine carbamoyltran 96.4 0.032 1.1E-06 52.5 12.1 107 162-272 152-274 (335)
266 1yqd_A Sinapyl alcohol dehydro 96.4 0.0049 1.7E-07 58.5 6.6 94 164-273 187-283 (366)
267 3gdo_A Uncharacterized oxidore 96.3 0.0059 2E-07 57.8 7.0 66 166-247 6-76 (358)
268 3nep_X Malate dehydrogenase; h 96.3 0.015 5.3E-07 54.2 9.7 104 166-273 1-119 (314)
269 4a8p_A Putrescine carbamoyltra 96.3 0.48 1.6E-05 44.8 19.9 201 29-280 59-281 (355)
270 1pjq_A CYSG, siroheme synthase 96.3 0.0045 1.6E-07 60.8 6.0 42 160-202 7-48 (457)
271 4ep1_A Otcase, ornithine carba 96.3 0.086 2.9E-06 49.6 14.4 114 162-279 176-304 (340)
272 3d0o_A L-LDH 1, L-lactate dehy 96.3 0.022 7.4E-07 53.2 10.3 125 165-294 6-147 (317)
273 3pqe_A L-LDH, L-lactate dehydr 96.3 0.0093 3.2E-07 56.1 7.8 104 165-273 5-123 (326)
274 4ew6_A D-galactose-1-dehydroge 96.3 0.0063 2.2E-07 57.0 6.6 62 164-245 24-90 (330)
275 3moi_A Probable dehydrogenase; 96.3 0.0079 2.7E-07 57.5 7.4 68 166-246 3-74 (387)
276 3tum_A Shikimate dehydrogenase 96.3 0.018 6.1E-07 52.6 9.4 118 161-289 121-241 (269)
277 3ldh_A Lactate dehydrogenase; 96.2 0.005 1.7E-07 58.0 5.8 105 164-273 20-139 (330)
278 4gqa_A NAD binding oxidoreduct 96.2 0.0072 2.5E-07 58.2 7.1 69 166-246 27-106 (412)
279 2we8_A Xanthine dehydrogenase; 96.2 0.0088 3E-07 57.5 7.5 93 165-295 204-302 (386)
280 3tl2_A Malate dehydrogenase; c 96.2 0.018 6.2E-07 53.8 9.5 107 164-273 7-128 (315)
281 4f2g_A Otcase 1, ornithine car 96.2 0.073 2.5E-06 49.5 13.5 108 162-279 151-274 (309)
282 1y6j_A L-lactate dehydrogenase 96.2 0.0099 3.4E-07 55.6 7.7 122 165-297 7-152 (318)
283 1ur5_A Malate dehydrogenase; o 96.2 0.01 3.6E-07 55.1 7.7 103 166-273 3-120 (309)
284 1hdg_O Holo-D-glyceraldehyde-3 96.2 0.01 3.5E-07 55.9 7.6 32 166-197 1-34 (332)
285 3fhl_A Putative oxidoreductase 96.2 0.0059 2E-07 57.8 6.0 66 166-246 6-75 (362)
286 3ojo_A CAP5O; rossmann fold, c 96.2 0.02 7E-07 55.8 9.8 87 162-275 312-409 (431)
287 2czc_A Glyceraldehyde-3-phosph 96.1 0.011 3.8E-07 55.6 7.6 81 166-247 3-90 (334)
288 1h6d_A Precursor form of gluco 96.1 0.01 3.4E-07 57.8 7.6 73 166-246 84-160 (433)
289 1lu9_A Methylene tetrahydromet 96.1 0.032 1.1E-06 51.0 10.5 82 162-246 116-198 (287)
290 1ff9_A Saccharopine reductase; 96.1 0.0058 2E-07 60.0 5.7 76 164-247 2-79 (450)
291 3e8x_A Putative NAD-dependent 96.1 0.013 4.6E-07 51.3 7.6 77 161-247 17-95 (236)
292 1oth_A Protein (ornithine tran 96.1 0.073 2.5E-06 49.8 12.9 107 162-272 152-271 (321)
293 1oi7_A Succinyl-COA synthetase 96.1 0.012 4E-07 54.3 7.3 105 165-291 7-116 (288)
294 1u8f_O GAPDH, glyceraldehyde-3 96.1 0.015 5E-07 54.9 8.1 31 166-196 4-34 (335)
295 3gg2_A Sugar dehydrogenase, UD 96.1 0.026 8.9E-07 55.3 10.2 98 160-275 313-421 (450)
296 3dty_A Oxidoreductase, GFO/IDH 96.1 0.013 4.4E-07 56.2 7.9 73 165-247 12-96 (398)
297 3i23_A Oxidoreductase, GFO/IDH 96.1 0.0085 2.9E-07 56.4 6.4 68 166-246 3-75 (349)
298 3gvi_A Malate dehydrogenase; N 96.1 0.015 5E-07 54.6 8.0 105 163-273 5-125 (324)
299 2yfq_A Padgh, NAD-GDH, NAD-spe 96.0 0.023 7.9E-07 55.2 9.5 118 160-292 207-340 (421)
300 4fcc_A Glutamate dehydrogenase 96.0 0.017 5.8E-07 56.4 8.5 120 161-294 231-370 (450)
301 3rui_A Ubiquitin-like modifier 96.0 0.0083 2.8E-07 56.6 6.2 104 161-272 30-171 (340)
302 2dt5_A AT-rich DNA-binding pro 96.0 0.0058 2E-07 53.9 4.8 67 166-246 81-150 (211)
303 3ijr_A Oxidoreductase, short c 96.0 0.031 1.1E-06 51.0 9.8 40 161-201 43-83 (291)
304 1u8x_X Maltose-6'-phosphate gl 96.0 0.0087 3E-07 59.1 6.3 128 165-294 28-193 (472)
305 1zud_1 Adenylyltransferase THI 96.0 0.0068 2.3E-07 54.7 5.2 103 161-271 24-149 (251)
306 4f3y_A DHPR, dihydrodipicolina 96.0 0.014 4.6E-07 53.5 7.2 97 166-274 8-106 (272)
307 3p7m_A Malate dehydrogenase; p 96.0 0.037 1.3E-06 51.8 10.3 126 164-295 4-147 (321)
308 2i6t_A Ubiquitin-conjugating e 95.9 0.0067 2.3E-07 56.4 5.0 99 165-273 14-126 (303)
309 1ez4_A Lactate dehydrogenase; 95.9 0.022 7.5E-07 53.2 8.5 123 166-294 6-145 (318)
310 2zqz_A L-LDH, L-lactate dehydr 95.9 0.019 6.3E-07 53.9 7.9 124 165-294 9-149 (326)
311 1ml4_A Aspartate transcarbamoy 95.9 0.023 7.9E-07 52.9 8.5 103 162-272 152-268 (308)
312 3v5n_A Oxidoreductase; structu 95.9 0.021 7.3E-07 55.1 8.6 72 166-247 38-121 (417)
313 1zh8_A Oxidoreductase; TM0312, 95.9 0.021 7.3E-07 53.5 8.3 68 166-246 19-92 (340)
314 1zq6_A Otcase, ornithine carba 95.9 0.71 2.4E-05 43.7 18.7 112 163-279 188-325 (359)
315 4h3v_A Oxidoreductase domain p 95.9 0.01 3.5E-07 56.0 6.1 69 166-246 7-85 (390)
316 1s6y_A 6-phospho-beta-glucosid 95.9 0.023 7.9E-07 55.7 8.7 128 165-294 7-174 (450)
317 4e4t_A Phosphoribosylaminoimid 95.9 0.0078 2.7E-07 58.4 5.4 39 162-201 32-70 (419)
318 3two_A Mannitol dehydrogenase; 95.9 0.011 3.9E-07 55.4 6.4 92 164-274 176-267 (348)
319 3k92_A NAD-GDH, NAD-specific g 95.8 0.04 1.4E-06 53.4 10.1 118 160-293 216-344 (424)
320 3csu_A Protein (aspartate carb 95.8 0.047 1.6E-06 50.9 10.2 109 162-278 151-274 (310)
321 3cmc_O GAPDH, glyceraldehyde-3 95.8 0.015 5.2E-07 54.8 7.0 33 166-198 2-34 (334)
322 3o9z_A Lipopolysaccaride biosy 95.8 0.014 4.8E-07 54.2 6.7 67 166-246 4-82 (312)
323 3g79_A NDP-N-acetyl-D-galactos 95.8 0.017 5.7E-07 57.1 7.5 98 161-282 349-458 (478)
324 1b7g_O Protein (glyceraldehyde 95.8 0.024 8.1E-07 53.5 8.2 81 166-247 2-88 (340)
325 2cdc_A Glucose dehydrogenase g 95.8 0.0069 2.4E-07 57.4 4.6 95 162-273 178-279 (366)
326 3lk7_A UDP-N-acetylmuramoylala 95.8 0.017 5.8E-07 56.5 7.5 120 162-290 6-138 (451)
327 3on5_A BH1974 protein; structu 95.8 0.014 4.7E-07 55.6 6.5 93 165-296 199-293 (362)
328 1pqw_A Polyketide synthase; ro 95.8 0.011 3.9E-07 50.5 5.5 95 164-274 38-139 (198)
329 2d8a_A PH0655, probable L-thre 95.8 0.0084 2.9E-07 56.3 5.0 95 164-273 167-268 (348)
330 1rjw_A ADH-HT, alcohol dehydro 95.7 0.014 4.9E-07 54.5 6.5 96 164-274 164-263 (339)
331 1piw_A Hypothetical zinc-type 95.7 0.015 5E-07 54.9 6.6 97 164-274 179-278 (360)
332 1cdo_A Alcohol dehydrogenase; 95.7 0.041 1.4E-06 52.1 9.5 95 164-273 192-295 (374)
333 3qvo_A NMRA family protein; st 95.7 0.0041 1.4E-07 54.9 2.3 102 163-276 21-128 (236)
334 3fi9_A Malate dehydrogenase; s 95.7 0.023 7.8E-07 53.8 7.5 77 163-245 6-85 (343)
335 2fp4_A Succinyl-COA ligase [GD 95.6 0.018 6.2E-07 53.5 6.6 109 161-292 9-125 (305)
336 1xyg_A Putative N-acetyl-gamma 95.6 0.043 1.5E-06 52.1 9.4 98 164-273 15-113 (359)
337 1uuf_A YAHK, zinc-type alcohol 95.6 0.014 4.8E-07 55.4 6.0 94 164-274 194-290 (369)
338 3s2e_A Zinc-containing alcohol 95.6 0.016 5.6E-07 54.1 6.2 95 164-273 166-264 (340)
339 3oa2_A WBPB; oxidoreductase, s 95.6 0.021 7.1E-07 53.2 6.9 67 166-246 4-83 (318)
340 2ozp_A N-acetyl-gamma-glutamyl 95.6 0.032 1.1E-06 52.8 8.2 95 166-273 5-100 (345)
341 2jhf_A Alcohol dehydrogenase E 95.6 0.043 1.5E-06 51.9 9.1 95 164-273 191-294 (374)
342 1kyq_A Met8P, siroheme biosynt 95.6 0.0047 1.6E-07 56.7 2.3 40 160-200 8-47 (274)
343 3u3x_A Oxidoreductase; structu 95.5 0.027 9.4E-07 53.3 7.6 68 165-245 26-97 (361)
344 3r6d_A NAD-dependent epimerase 95.5 0.0095 3.3E-07 51.7 4.1 101 165-276 5-111 (221)
345 3cps_A Glyceraldehyde 3-phosph 95.5 0.052 1.8E-06 51.5 9.5 31 166-196 18-48 (354)
346 3e5r_O PP38, glyceraldehyde-3- 95.5 0.028 9.4E-07 53.0 7.5 31 166-196 4-34 (337)
347 1v9l_A Glutamate dehydrogenase 95.5 0.07 2.4E-06 51.7 10.5 122 160-293 205-340 (421)
348 4a8t_A Putrescine carbamoyltra 95.5 0.21 7.1E-06 47.0 13.4 113 162-279 172-302 (339)
349 2xxj_A L-LDH, L-lactate dehydr 95.5 0.043 1.5E-06 51.0 8.7 102 166-273 1-117 (310)
350 3keo_A Redox-sensing transcrip 95.5 0.014 4.7E-07 51.5 4.9 70 165-246 84-158 (212)
351 3ip1_A Alcohol dehydrogenase, 95.5 0.038 1.3E-06 53.0 8.6 101 163-273 212-319 (404)
352 3h9e_O Glyceraldehyde-3-phosph 95.5 0.018 6.1E-07 54.4 5.9 35 166-201 8-43 (346)
353 1e3j_A NADP(H)-dependent ketos 95.4 0.061 2.1E-06 50.4 9.7 96 164-274 168-273 (352)
354 3tpf_A Otcase, ornithine carba 95.4 0.29 1E-05 45.4 14.0 115 162-280 142-273 (307)
355 4h31_A Otcase, ornithine carba 95.4 0.37 1.3E-05 45.6 15.0 108 161-272 177-300 (358)
356 1e3i_A Alcohol dehydrogenase, 95.4 0.057 1.9E-06 51.1 9.5 95 164-273 195-298 (376)
357 1p0f_A NADP-dependent alcohol 95.4 0.05 1.7E-06 51.5 9.0 95 164-273 191-294 (373)
358 3do5_A HOM, homoserine dehydro 95.4 0.031 1.1E-06 52.5 7.4 116 166-291 3-135 (327)
359 2ixa_A Alpha-N-acetylgalactosa 95.4 0.046 1.6E-06 53.2 8.9 74 166-246 21-101 (444)
360 4gsl_A Ubiquitin-like modifier 95.4 0.015 5.1E-07 58.9 5.3 137 110-272 285-463 (615)
361 2dq4_A L-threonine 3-dehydroge 95.3 0.019 6.4E-07 53.8 5.7 94 164-273 164-263 (343)
362 1nvm_B Acetaldehyde dehydrogen 95.3 0.033 1.1E-06 51.9 7.3 69 166-245 5-80 (312)
363 4gmf_A Yersiniabactin biosynth 95.3 0.016 5.5E-07 55.4 5.2 68 165-247 7-77 (372)
364 2fzw_A Alcohol dehydrogenase c 95.3 0.045 1.5E-06 51.7 8.3 95 164-273 190-293 (373)
365 3eag_A UDP-N-acetylmuramate:L- 95.3 0.045 1.5E-06 51.1 8.2 115 165-290 4-134 (326)
366 3ff4_A Uncharacterized protein 95.3 0.018 6E-07 46.3 4.6 99 166-292 5-107 (122)
367 1ys4_A Aspartate-semialdehyde 95.3 0.0099 3.4E-07 56.4 3.6 102 166-273 9-115 (354)
368 1gad_O D-glyceraldehyde-3-phos 95.3 0.035 1.2E-06 52.2 7.3 33 166-198 2-34 (330)
369 3ew7_A LMO0794 protein; Q8Y8U8 95.3 0.067 2.3E-06 45.8 8.7 97 166-274 1-104 (221)
370 2nqt_A N-acetyl-gamma-glutamyl 95.3 0.083 2.8E-06 50.0 9.9 105 165-284 9-122 (352)
371 1hdo_A Biliverdin IX beta redu 95.3 0.087 3E-06 44.4 9.3 73 165-247 3-78 (206)
372 4aj2_A L-lactate dehydrogenase 95.3 0.074 2.5E-06 50.0 9.5 107 162-273 16-137 (331)
373 1iz0_A Quinone oxidoreductase; 95.2 0.019 6.4E-07 52.7 5.3 93 164-273 125-219 (302)
374 2hcy_A Alcohol dehydrogenase 1 95.2 0.029 1E-06 52.5 6.7 96 164-274 169-271 (347)
375 4ej6_A Putative zinc-binding d 95.2 0.026 8.7E-07 53.6 6.3 95 164-273 182-285 (370)
376 1pl8_A Human sorbitol dehydrog 95.2 0.038 1.3E-06 52.0 7.5 95 164-274 171-275 (356)
377 3ijp_A DHPR, dihydrodipicolina 95.2 0.041 1.4E-06 50.7 7.5 98 166-274 22-121 (288)
378 1lc0_A Biliverdin reductase A; 95.2 0.023 7.7E-07 52.3 5.7 101 166-290 8-116 (294)
379 2cf5_A Atccad5, CAD, cinnamyl 95.2 0.026 8.8E-07 53.2 6.2 94 164-273 180-276 (357)
380 2d4a_B Malate dehydrogenase; a 95.2 0.018 6.2E-07 53.5 5.1 102 167-273 1-117 (308)
381 3grf_A Ornithine carbamoyltran 95.2 0.15 5.3E-06 47.7 11.4 117 161-279 157-293 (328)
382 3r3s_A Oxidoreductase; structu 95.2 0.082 2.8E-06 48.3 9.4 38 161-199 45-83 (294)
383 2y0c_A BCEC, UDP-glucose dehyd 95.2 0.13 4.3E-06 50.8 11.3 109 160-280 323-445 (478)
384 4ekn_B Aspartate carbamoyltran 95.1 0.23 7.9E-06 46.0 12.3 75 162-244 148-226 (306)
385 2q3e_A UDP-glucose 6-dehydroge 95.1 0.11 3.9E-06 50.9 10.8 104 162-275 326-445 (467)
386 3h2s_A Putative NADH-flavin re 95.1 0.088 3E-06 45.3 9.0 98 166-274 1-106 (224)
387 1cf2_P Protein (glyceraldehyde 95.1 0.033 1.1E-06 52.5 6.6 82 166-247 2-89 (337)
388 3ip3_A Oxidoreductase, putativ 95.1 0.019 6.5E-07 53.7 4.9 71 166-245 3-76 (337)
389 3v2g_A 3-oxoacyl-[acyl-carrier 95.1 0.059 2E-06 48.7 8.0 40 161-201 27-67 (271)
390 2nvw_A Galactose/lactose metab 95.1 0.056 1.9E-06 53.3 8.4 70 165-245 39-117 (479)
391 1rm4_O Glyceraldehyde 3-phosph 95.0 0.041 1.4E-06 51.8 7.1 30 167-196 3-34 (337)
392 3upl_A Oxidoreductase; rossman 95.0 0.063 2.1E-06 52.5 8.4 121 166-291 24-159 (446)
393 3uko_A Alcohol dehydrogenase c 95.0 0.054 1.8E-06 51.4 7.8 95 164-273 193-296 (378)
394 1f8f_A Benzyl alcohol dehydrog 95.0 0.026 8.8E-07 53.4 5.5 95 164-273 190-290 (371)
395 4b7c_A Probable oxidoreductase 94.9 0.027 9.2E-07 52.4 5.5 97 164-275 149-251 (336)
396 3btv_A Galactose/lactose metab 94.9 0.04 1.4E-06 53.6 6.9 70 166-246 21-99 (438)
397 1v3u_A Leukotriene B4 12- hydr 94.9 0.046 1.6E-06 50.7 7.1 94 164-273 145-245 (333)
398 3aoe_E Glutamate dehydrogenase 94.9 0.27 9.2E-06 47.6 12.6 114 161-294 214-339 (419)
399 4dup_A Quinone oxidoreductase; 94.9 0.031 1.1E-06 52.6 5.8 94 164-273 167-266 (353)
400 3uog_A Alcohol dehydrogenase; 94.9 0.039 1.3E-06 52.1 6.5 94 164-273 189-288 (363)
401 1mld_A Malate dehydrogenase; o 94.9 0.13 4.4E-06 47.8 10.0 104 167-281 2-124 (314)
402 3fpc_A NADP-dependent alcohol 94.9 0.033 1.1E-06 52.3 5.9 94 164-272 166-266 (352)
403 4ina_A Saccharopine dehydrogen 94.9 0.04 1.4E-06 53.1 6.7 77 166-245 2-85 (405)
404 4eye_A Probable oxidoreductase 94.9 0.039 1.3E-06 51.6 6.4 93 164-273 159-258 (342)
405 3is3_A 17BETA-hydroxysteroid d 94.8 0.057 2E-06 48.6 7.1 40 161-201 14-54 (270)
406 3vh1_A Ubiquitin-like modifier 94.8 0.034 1.2E-06 56.2 6.0 104 161-272 323-464 (598)
407 2yv1_A Succinyl-COA ligase [AD 94.8 0.032 1.1E-06 51.5 5.4 104 166-291 14-122 (294)
408 3m6i_A L-arabinitol 4-dehydrog 94.7 0.12 4E-06 48.6 9.4 97 164-273 179-284 (363)
409 3oqb_A Oxidoreductase; structu 94.7 0.038 1.3E-06 52.5 5.9 69 166-246 7-93 (383)
410 3hhp_A Malate dehydrogenase; M 94.7 0.16 5.4E-06 47.3 10.0 109 166-283 1-127 (312)
411 3h8v_A Ubiquitin-like modifier 94.7 0.039 1.3E-06 51.0 5.8 38 161-199 32-70 (292)
412 3d6n_B Aspartate carbamoyltran 94.7 0.66 2.3E-05 42.6 14.0 69 162-246 143-214 (291)
413 2rir_A Dipicolinate synthase, 94.6 0.14 4.8E-06 47.0 9.4 110 162-294 4-123 (300)
414 2d2i_A Glyceraldehyde 3-phosph 94.6 0.05 1.7E-06 52.0 6.4 32 166-197 3-36 (380)
415 3pxx_A Carveol dehydrogenase; 94.6 0.15 5.2E-06 45.8 9.4 37 161-198 6-43 (287)
416 2yyy_A Glyceraldehyde-3-phosph 94.6 0.11 3.7E-06 49.1 8.6 30 166-195 3-32 (343)
417 2ejw_A HDH, homoserine dehydro 94.5 0.037 1.3E-06 52.1 5.3 102 166-289 4-116 (332)
418 2x5j_O E4PDH, D-erythrose-4-ph 94.5 0.077 2.6E-06 50.0 7.4 32 166-197 3-37 (339)
419 1lnq_A MTHK channels, potassiu 94.5 0.024 8.1E-07 52.9 3.8 89 165-267 115-206 (336)
420 3oig_A Enoyl-[acyl-carrier-pro 94.3 0.23 8E-06 44.1 10.0 38 162-200 4-44 (266)
421 2c0c_A Zinc binding alcohol de 94.3 0.047 1.6E-06 51.6 5.4 95 164-274 163-263 (362)
422 3jyn_A Quinone oxidoreductase; 94.2 0.051 1.8E-06 50.3 5.6 94 164-273 140-240 (325)
423 2yv2_A Succinyl-COA synthetase 94.2 0.067 2.3E-06 49.4 6.3 104 166-291 14-123 (297)
424 3qwb_A Probable quinone oxidor 94.2 0.053 1.8E-06 50.4 5.6 94 164-273 148-248 (334)
425 3i6i_A Putative leucoanthocyan 94.2 0.092 3.1E-06 48.7 7.3 79 163-246 8-93 (346)
426 1dih_A Dihydrodipicolinate red 94.2 0.025 8.5E-07 51.7 3.2 74 166-245 6-81 (273)
427 3b1j_A Glyceraldehyde 3-phosph 94.2 0.098 3.3E-06 49.3 7.3 31 166-196 3-35 (339)
428 1mv8_A GMD, GDP-mannose 6-dehy 94.2 0.15 5.1E-06 49.5 8.9 97 164-271 312-419 (436)
429 2o3j_A UDP-glucose 6-dehydroge 94.2 0.26 8.9E-06 48.5 10.7 112 162-283 332-456 (481)
430 2pd4_A Enoyl-[acyl-carrier-pro 94.1 0.053 1.8E-06 48.8 5.3 38 162-200 3-43 (275)
431 3nv9_A Malic enzyme; rossmann 94.1 1 3.5E-05 44.0 14.3 168 108-322 186-367 (487)
432 3gms_A Putative NADPH:quinone 94.1 0.042 1.4E-06 51.3 4.6 94 164-273 144-244 (340)
433 3dhn_A NAD-dependent epimerase 94.1 0.075 2.6E-06 45.9 5.9 73 166-247 5-78 (227)
434 2h6e_A ADH-4, D-arabinose 1-de 94.0 0.031 1.1E-06 52.3 3.7 95 164-273 170-270 (344)
435 3vtf_A UDP-glucose 6-dehydroge 94.0 0.14 4.7E-06 50.1 8.3 88 161-271 329-426 (444)
436 1js1_X Transcarbamylase; alpha 94.0 3.8 0.00013 38.1 17.9 101 162-279 166-285 (324)
437 1g0o_A Trihydroxynaphthalene r 94.0 0.12 4.3E-06 46.6 7.5 40 161-201 25-65 (283)
438 3sds_A Ornithine carbamoyltran 94.0 0.41 1.4E-05 45.2 11.2 110 161-272 184-308 (353)
439 1vj0_A Alcohol dehydrogenase, 94.0 0.06 2.1E-06 51.1 5.6 95 164-273 195-299 (380)
440 2eih_A Alcohol dehydrogenase; 94.0 0.077 2.6E-06 49.5 6.2 94 164-273 166-266 (343)
441 1qor_A Quinone oxidoreductase; 93.9 0.071 2.4E-06 49.3 5.9 94 164-273 140-240 (327)
442 2p91_A Enoyl-[acyl-carrier-pro 93.9 0.12 4E-06 46.8 7.3 38 162-200 18-58 (285)
443 2ep5_A 350AA long hypothetical 93.9 0.042 1.4E-06 52.0 4.3 31 166-196 5-36 (350)
444 3edm_A Short chain dehydrogena 93.9 0.1 3.5E-06 46.6 6.7 37 162-199 5-43 (259)
445 3gpi_A NAD-dependent epimerase 93.9 0.045 1.5E-06 49.3 4.3 70 164-245 2-72 (286)
446 3tqh_A Quinone oxidoreductase; 93.8 0.046 1.6E-06 50.6 4.2 93 164-273 152-246 (321)
447 3fbg_A Putative arginate lyase 93.8 0.099 3.4E-06 48.8 6.6 93 164-272 150-248 (346)
448 3h5n_A MCCB protein; ubiquitin 93.7 0.066 2.3E-06 50.7 5.3 37 161-198 114-151 (353)
449 1y8q_A Ubiquitin-like 1 activa 93.7 0.067 2.3E-06 50.5 5.3 93 161-260 32-148 (346)
450 3k5i_A Phosphoribosyl-aminoimi 93.7 0.045 1.5E-06 52.6 4.2 40 158-199 17-56 (403)
451 1xq6_A Unknown protein; struct 93.7 0.13 4.5E-06 44.7 6.9 73 163-246 2-79 (253)
452 2vn8_A Reticulon-4-interacting 93.6 0.31 1E-05 46.0 9.8 97 164-275 183-283 (375)
453 3mw9_A GDH 1, glutamate dehydr 93.6 0.51 1.7E-05 46.5 11.5 116 162-292 241-366 (501)
454 2j3h_A NADP-dependent oxidored 93.6 0.077 2.6E-06 49.4 5.5 95 164-273 155-256 (345)
455 2bka_A CC3, TAT-interacting pr 93.6 0.055 1.9E-06 47.3 4.3 77 163-247 16-95 (242)
456 1vkn_A N-acetyl-gamma-glutamyl 93.6 0.35 1.2E-05 45.7 10.0 101 164-278 12-113 (351)
457 3grk_A Enoyl-(acyl-carrier-pro 93.6 0.13 4.3E-06 47.0 6.8 39 161-200 27-68 (293)
458 3dr3_A N-acetyl-gamma-glutamyl 93.6 0.094 3.2E-06 49.4 6.0 99 166-275 5-109 (337)
459 1kol_A Formaldehyde dehydrogen 93.6 0.14 4.6E-06 48.8 7.2 100 164-273 185-301 (398)
460 3ius_A Uncharacterized conserv 93.5 0.15 5.3E-06 45.5 7.1 70 165-247 5-74 (286)
461 2b5w_A Glucose dehydrogenase; 93.4 0.071 2.4E-06 50.1 4.9 95 163-273 171-274 (357)
462 3r3j_A Glutamate dehydrogenase 93.4 0.2 6.7E-06 48.9 8.1 37 160-197 234-271 (456)
463 1smk_A Malate dehydrogenase, g 93.4 0.15 5.1E-06 47.6 7.1 103 165-279 8-130 (326)
464 3dqp_A Oxidoreductase YLBE; al 93.4 0.2 6.8E-06 43.0 7.5 70 167-248 2-75 (219)
465 3pi7_A NADH oxidoreductase; gr 93.2 0.23 8E-06 46.3 8.2 92 166-273 166-264 (349)
466 1wly_A CAAR, 2-haloacrylate re 93.1 0.13 4.5E-06 47.6 6.3 94 164-273 145-245 (333)
467 3mtj_A Homoserine dehydrogenas 93.1 0.2 6.7E-06 49.0 7.6 108 165-291 10-130 (444)
468 2x5o_A UDP-N-acetylmuramoylala 93.1 0.098 3.3E-06 50.8 5.4 115 162-289 2-129 (439)
469 1p9l_A Dihydrodipicolinate red 93.0 0.34 1.2E-05 43.4 8.6 31 167-197 2-34 (245)
470 2x0j_A Malate dehydrogenase; o 93.0 0.29 1E-05 45.1 8.3 105 166-273 1-119 (294)
471 1o6z_A MDH, malate dehydrogena 93.0 0.23 8E-06 45.7 7.7 124 166-295 1-144 (303)
472 2x9g_A PTR1, pteridine reducta 93.0 0.13 4.4E-06 46.6 5.8 39 160-199 18-57 (288)
473 2j8z_A Quinone oxidoreductase; 93.0 0.12 4.1E-06 48.5 5.8 94 164-273 162-262 (354)
474 3c8m_A Homoserine dehydrogenas 93.0 0.11 3.8E-06 48.6 5.5 116 166-290 7-140 (331)
475 4hv4_A UDP-N-acetylmuramate--L 93.0 0.19 6.4E-06 49.7 7.4 114 164-290 21-148 (494)
476 2zb4_A Prostaglandin reductase 92.9 0.14 4.7E-06 48.0 6.0 93 166-273 162-261 (357)
477 2dph_A Formaldehyde dismutase; 92.9 0.13 4.6E-06 49.0 6.0 99 164-273 185-300 (398)
478 2wm3_A NMRA-like family domain 92.9 0.19 6.5E-06 45.4 6.8 73 165-245 5-81 (299)
479 4id9_A Short-chain dehydrogena 92.8 0.086 3E-06 48.7 4.5 73 161-247 15-88 (347)
480 1xgk_A Nitrogen metabolite rep 92.8 0.083 2.8E-06 49.6 4.3 104 164-275 4-115 (352)
481 1jvb_A NAD(H)-dependent alcoho 92.7 0.24 8.4E-06 46.1 7.5 96 164-274 170-273 (347)
482 3jv7_A ADH-A; dehydrogenase, n 92.7 0.11 3.9E-06 48.3 5.1 93 164-272 171-270 (345)
483 1yb5_A Quinone oxidoreductase; 92.6 0.17 5.8E-06 47.4 6.3 94 164-273 170-270 (351)
484 2pzm_A Putative nucleotide sug 92.6 0.18 6.1E-06 46.4 6.3 79 161-247 16-99 (330)
485 1qyc_A Phenylcoumaran benzylic 92.6 0.23 7.7E-06 44.9 6.9 77 165-246 4-87 (308)
486 4dvj_A Putative zinc-dependent 92.5 0.37 1.3E-05 45.3 8.6 94 164-273 171-271 (363)
487 4da9_A Short-chain dehydrogena 92.5 0.29 9.9E-06 44.2 7.5 39 161-200 25-64 (280)
488 4dmm_A 3-oxoacyl-[acyl-carrier 92.5 0.15 5.3E-06 45.8 5.6 39 161-200 24-63 (269)
489 1ebf_A Homoserine dehydrogenas 92.4 0.18 6.1E-06 47.8 6.2 32 166-197 5-40 (358)
490 2gas_A Isoflavone reductase; N 92.4 0.38 1.3E-05 43.4 8.2 76 165-246 2-86 (307)
491 3o38_A Short chain dehydrogena 92.4 0.11 3.7E-06 46.4 4.4 40 161-201 18-59 (266)
492 3e48_A Putative nucleoside-dip 92.3 0.08 2.7E-06 47.6 3.4 71 167-247 2-76 (289)
493 4g65_A TRK system potassium up 92.3 0.14 4.8E-06 50.2 5.4 75 165-246 3-78 (461)
494 3afn_B Carbonyl reductase; alp 92.3 0.14 4.8E-06 45.0 4.9 36 162-198 4-40 (258)
495 3hn7_A UDP-N-acetylmuramate-L- 92.2 0.25 8.5E-06 49.2 7.2 117 163-290 17-148 (524)
496 4eez_A Alcohol dehydrogenase 1 92.2 0.24 8.4E-06 45.9 6.7 38 164-201 163-200 (348)
497 2yfk_A Aspartate/ornithine car 92.2 0.28 9.6E-06 47.4 7.2 106 163-272 186-331 (418)
498 1b8p_A Protein (malate dehydro 92.1 0.38 1.3E-05 44.8 8.0 102 166-273 6-134 (329)
499 2r00_A Aspartate-semialdehyde 92.1 0.11 3.7E-06 48.8 4.2 31 166-196 4-37 (336)
500 2r6j_A Eugenol synthase 1; phe 92.0 0.51 1.7E-05 42.9 8.6 75 165-245 11-88 (318)
No 1
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=9.4e-73 Score=541.67 Aligned_cols=307 Identities=28% Similarity=0.455 Sum_probs=274.3
Q ss_pred CCCCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHh-hccCCceE
Q 019328 12 PNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAAL-SRAGGKAF 90 (342)
Q Consensus 12 ~~~~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~l~~k~i 90 (342)
+++++|||++.++++. ..+.|++. +++++. ..+...+++++.+.+. ++|+++++..+++++++++++ |+| |+|
T Consensus 25 ~~~~~kvlv~~~~~~~-~~~~l~~~-~~v~~~-~~~~~~~~~~l~~~~~-~~d~li~~~~~~i~~~~l~~~~~~L--k~I 98 (345)
T 4g2n_A 25 THPIQKAFLCRRFTPA-IEAELRQR-FDLEVN-LEDTVLTPSGIASRAH-GAEVLFVTATEAITAEVIRKLQPGL--KTI 98 (345)
T ss_dssp --CCCEEEESSCCCHH-HHHHHHHH-SEEEEC-TTCCCCCHHHHHHHTT-TCSEEEECTTSCBCHHHHHHTTTTC--CEE
T ss_pred cCCCCEEEEeCCCCHH-HHHHHHcc-CCEEEe-cCCCCCCHHHHHHHhc-CCeEEEEeCCCCCCHHHHHhhcCCc--eEE
Confidence 4578999999999874 45677664 576643 2334578999998887 599999987788999999998 676 999
Q ss_pred EEcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEE
Q 019328 91 SNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV 170 (342)
Q Consensus 91 ~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGI 170 (342)
+++|+|+|+||+++|+++||.|+|+||+++++||||++++||++.|++..+++.+++|.|..|.+....|++|+||||||
T Consensus 99 ~~~~~G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGI 178 (345)
T 4g2n_A 99 ATLSVGYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGI 178 (345)
T ss_dssp EESSSCCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEE
T ss_pred EEcCCcccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999988865555689999999999
Q ss_pred EccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccc
Q 019328 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (342)
Q Consensus 171 iG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t 250 (342)
||+|+||+.+|+++ ++|||+|++|||++.+.... . +.....++++++++||+|++|+|+|++|
T Consensus 179 IGlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~~~------------~----g~~~~~~l~ell~~sDvV~l~~Plt~~T 241 (345)
T 4g2n_A 179 FGMGRIGRAIATRA-RGFGLAIHYHNRTRLSHALE------------E----GAIYHDTLDSLLGASDIFLIAAPGRPEL 241 (345)
T ss_dssp ESCSHHHHHHHHHH-HTTTCEEEEECSSCCCHHHH------------T----TCEECSSHHHHHHTCSEEEECSCCCGGG
T ss_pred EEeChhHHHHHHHH-HHCCCEEEEECCCCcchhhh------------c----CCeEeCCHHHHHhhCCEEEEecCCCHHH
Confidence 99999999999997 79999999999986432111 0 1223359999999999999999999999
Q ss_pred ccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCceEEcCCCCCCcHHHHH
Q 019328 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTRE 330 (342)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi~TPHia~~t~~~~~ 330 (342)
+++|+++.|+.||+|++|||+|||+++|++||++||++|+|+||+||||++||++++|||++|||++|||+||+|.++++
T Consensus 242 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~e~~~ 321 (345)
T 4g2n_A 242 KGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATHETRD 321 (345)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBHHHHH
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999777899999999999999999999999
Q ss_pred HHHHHHHhhhc
Q 019328 331 GMATLAALNVL 341 (342)
Q Consensus 331 ~~~~~~~~ni~ 341 (342)
+|...+++||.
T Consensus 322 ~~~~~~~~ni~ 332 (345)
T 4g2n_A 322 AMGWLLIQGIE 332 (345)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999984
No 2
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=1.6e-71 Score=532.04 Aligned_cols=297 Identities=29% Similarity=0.395 Sum_probs=255.1
Q ss_pred eEEEEeCCCCch-H-HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEc
Q 019328 16 YRVVSTKPMPGT-R-WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (342)
Q Consensus 16 ~kvl~~~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~ 93 (342)
||||++....+. . +.+.+++.+ +++...+....+++++. ++|+++++..+++++++++++|+| |+|+++
T Consensus 1 Mkil~~~~~~~~~p~~~e~l~~~~--~~~~~~~~~~~~~~~l~-----~ad~i~v~~~~~i~~~~l~~~p~L--k~I~~~ 71 (334)
T 3kb6_A 1 MNVLFTSVPQEDVPFYQEALKDLS--LKIYTTDVSKVPENELK-----KAELISVFVYDKLTEELLSKMPRL--KLIHTR 71 (334)
T ss_dssp -CEEECSCCTTHHHHHHHHTTTSC--EEECSSCGGGSCHHHHH-----HCSEEEECTTSCBCHHHHHTCTTC--CEEEES
T ss_pred CEEEEeCCCcccCHHHHHHHHhCC--cEEEeCCcccCCHHHhc-----CCCEEEEeCCCCCCHHHHhcCCCC--cEEEEC
Confidence 678887533321 1 334454444 44433332334455543 489999988889999999999997 999999
Q ss_pred ccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEcc
Q 019328 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (342)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~ 173 (342)
|+|+||||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..|. ...|++|+|||+||||+
T Consensus 72 ~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~--~~~~~~l~g~tvGIiG~ 149 (334)
T 3kb6_A 72 SVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDS--EILARELNRLTLGVIGT 149 (334)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCG--GGCBCCGGGSEEEEECC
T ss_pred CcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhcccccccccccccccccc--ccccceecCcEEEEECc
Confidence 9999999999999999999999999999999999999999999999999999999986554 34678999999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccc
Q 019328 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (342)
Q Consensus 174 G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~l 253 (342)
|+||+.+|+++ ++|||+|++|||+.+..... . .....++++++++||+|++|||+|++|+||
T Consensus 150 G~IG~~va~~~-~~fg~~v~~~d~~~~~~~~~----------------~-~~~~~~l~ell~~sDivslh~Plt~~T~~l 211 (334)
T 3kb6_A 150 GRIGSRVAMYG-LAFGMKVLCYDVVKREDLKE----------------K-GCVYTSLDELLKESDVISLHVPYTKETHHM 211 (334)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCHHHHH----------------T-TCEECCHHHHHHHCSEEEECCCCCTTTTTC
T ss_pred chHHHHHHHhh-cccCceeeecCCccchhhhh----------------c-CceecCHHHHHhhCCEEEEcCCCChhhccC
Confidence 99999999996 89999999999987543211 0 113469999999999999999999999999
Q ss_pred cCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCC-C---------------CccCCCceEE
Q 019328 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-P---------------GLSEMKNAIV 317 (342)
Q Consensus 254 i~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~-~---------------~L~~~~nvi~ 317 (342)
||++.|++||+|++|||+|||++|||+||++||++|+|+|||||||++||++. + |||++|||++
T Consensus 212 i~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvil 291 (334)
T 3kb6_A 212 INEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVII 291 (334)
T ss_dssp BCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEE
T ss_pred cCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEE
Confidence 99999999999999999999999999999999999999999999999999642 2 6899999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhc
Q 019328 318 VPHIASASKWTREGMATLAALNVL 341 (342)
Q Consensus 318 TPHia~~t~~~~~~~~~~~~~ni~ 341 (342)
|||+||+|.++++++...+++||.
T Consensus 292 TPHia~~T~ea~~~~~~~~~~ni~ 315 (334)
T 3kb6_A 292 TPHIAYYTDKSLERIREETVKVVK 315 (334)
T ss_dssp CCSCTTCBHHHHHHHHHHHHHHHH
T ss_pred CCchhhChHHHHHHHHHHHHHHHH
Confidence 999999999999999999999984
No 3
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=9.5e-70 Score=519.14 Aligned_cols=304 Identities=30% Similarity=0.446 Sum_probs=271.1
Q ss_pred CeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEcc
Q 019328 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (342)
Q Consensus 15 ~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g 94 (342)
++|||++.++++. ..+.|++.+ ++.+. ......+++++.+.+. ++|+++++..+++++++++++|+| |+|++.|
T Consensus 2 ~~kvlv~~~~~~~-~~~~l~~~~-~v~~~-~~~~~~~~~~~~~~~~-~~d~~i~~~~~~i~~~~l~~~~~L--k~I~~~~ 75 (330)
T 4e5n_A 2 LPKLVITHRVHEE-ILQLLAPHC-ELITN-QTDSTLTREEILRRCR-DAQAMMAFMPDRVDADFLQACPEL--RVIGCAL 75 (330)
T ss_dssp CCEEEECSCCCHH-HHHHHTTTC-EEECC-CSSSCCCHHHHHHHHT-TCSEEEECTTCCBCHHHHHHCTTC--CEEEESS
T ss_pred CCEEEEecCCCHH-HHHHHHhCC-eEEEe-cCCCCCCHHHHHHHhC-CCeEEEEeCCCCCCHHHHhhCCCC--cEEEECC
Confidence 6789999998874 467887665 66532 2334568899998887 599999977789999999999987 9999999
Q ss_pred cccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccC
Q 019328 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (342)
Q Consensus 95 ~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G 174 (342)
+|+||||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..|.+ ...|++|+|+||||||+|
T Consensus 76 ~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~-~~~~~~l~g~tvGIIG~G 154 (330)
T 4e5n_A 76 KGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQP-RFYGTGLDNATVGFLGMG 154 (330)
T ss_dssp SCCTTBCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCS-CCCCCCSTTCEEEEECCS
T ss_pred CcccccCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCc-cccCCccCCCEEEEEeeC
Confidence 9999999999999999999999999999999999999999999999999999999988876 346889999999999999
Q ss_pred hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccccccc
Q 019328 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (342)
Q Consensus 175 ~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li 254 (342)
+||+.+|+++ ++|||+|++|||++...... ..+ +. ...++++++++||+|++|+|+|++|+++|
T Consensus 155 ~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~--~~~------------g~-~~~~l~ell~~aDvV~l~~P~t~~t~~li 218 (330)
T 4e5n_A 155 AIGLAMADRL-QGWGATLQYHEAKALDTQTE--QRL------------GL-RQVACSELFASSDFILLALPLNADTLHLV 218 (330)
T ss_dssp HHHHHHHHHT-TTSCCEEEEECSSCCCHHHH--HHH------------TE-EECCHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred HHHHHHHHHH-HHCCCEEEEECCCCCcHhHH--Hhc------------Cc-eeCCHHHHHhhCCEEEEcCCCCHHHHHHh
Confidence 9999999996 89999999999987321111 001 11 23589999999999999999999999999
Q ss_pred CHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCC-------CCC-CCCccCCCceEEcCCCCCCcH
Q 019328 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE-------PYM-KPGLSEMKNAIVVPHIASASK 326 (342)
Q Consensus 255 ~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~E-------P~~-~~~L~~~~nvi~TPHia~~t~ 326 (342)
+++.|+.||+|++|||+|||+++|+++|++||++|+|+||+||||++| |++ ++|||++|||++|||+||+|.
T Consensus 219 ~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~ 298 (330)
T 4e5n_A 219 NAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVR 298 (330)
T ss_dssp CHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCH
T ss_pred CHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChH
Confidence 999999999999999999999999999999999999999999999999 964 579999999999999999999
Q ss_pred HHHHHHHHHHHhhhc
Q 019328 327 WTREGMATLAALNVL 341 (342)
Q Consensus 327 ~~~~~~~~~~~~ni~ 341 (342)
+++++|...+++||.
T Consensus 299 e~~~~~~~~~~~ni~ 313 (330)
T 4e5n_A 299 AVRLEIERCAAQNIL 313 (330)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999984
No 4
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=3.7e-69 Score=526.15 Aligned_cols=303 Identities=29% Similarity=0.386 Sum_probs=266.6
Q ss_pred eCCCCCeEEEEeCCCCchHHHHHHHhCCC-eEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCc
Q 019328 10 WNPNGKYRVVSTKPMPGTRWINLLIEQDC-RVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGK 88 (342)
Q Consensus 10 ~~~~~~~kvl~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k 88 (342)
+.|+.++||++++.+++. ..+.|++.++ +++... ...+++++.+.+. ++|+++++..+++++++++++|+| |
T Consensus 10 ~~~~~~~kIl~~~~i~~~-~~~~l~~~g~~~v~~~~---~~~~~~~l~~~~~-~~d~l~v~~~~~i~~~~l~~~p~L--k 82 (416)
T 3k5p_A 10 SLSRDRINVLLLEGISQT-AVEYFKSSGYTNVTHLP---KALDKADLIKAIS-SAHIIGIRSRTQLTEEIFAAANRL--I 82 (416)
T ss_dssp --CGGGSCEEECSCCCHH-HHHHHHHTTCCCEEECS---SCCCHHHHHHHHT-TCSEEEECSSCCBCHHHHHHCTTC--C
T ss_pred CCCCCCcEEEEECCCCHH-HHHHHHHCCCcEEEECC---CCCCHHHHHHHcc-CCEEEEEcCCCCCCHHHHHhCCCc--E
Confidence 467779999999998864 4678888887 776532 3468899999887 499998888889999999999997 9
Q ss_pred eEEEcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEE
Q 019328 89 AFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTV 168 (342)
Q Consensus 89 ~i~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktv 168 (342)
+|+++|+|+||||+++|+++||.|+|+||+|+++||||++++||+++|++..+++.+++|.|..+ ...+.+++|||+
T Consensus 83 ~I~~~~~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~---~~~~~el~gktv 159 (416)
T 3k5p_A 83 AVGCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKT---AIGSREVRGKTL 159 (416)
T ss_dssp EEEECSSCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC---CTTCCCSTTCEE
T ss_pred EEEECccccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhccccccc---CCCCccCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999988643 234689999999
Q ss_pred EEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCc
Q 019328 169 GVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK 248 (342)
Q Consensus 169 GIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~ 248 (342)
||||+|+||+.+|+++ ++|||+|++||++..... .......++++++++||+|++|+|+|+
T Consensus 160 GIIGlG~IG~~vA~~l-~~~G~~V~~yd~~~~~~~------------------~~~~~~~sl~ell~~aDvV~lhvPlt~ 220 (416)
T 3k5p_A 160 GIVGYGNIGSQVGNLA-ESLGMTVRYYDTSDKLQY------------------GNVKPAASLDELLKTSDVVSLHVPSSK 220 (416)
T ss_dssp EEECCSHHHHHHHHHH-HHTTCEEEEECTTCCCCB------------------TTBEECSSHHHHHHHCSEEEECCCC--
T ss_pred EEEeeCHHHHHHHHHH-HHCCCEEEEECCcchhcc------------------cCcEecCCHHHHHhhCCEEEEeCCCCH
Confidence 9999999999999996 799999999999753210 012235799999999999999999999
Q ss_pred ccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCC-----CCccCCCceEEcCCCCC
Q 019328 249 TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-----PGLSEMKNAIVVPHIAS 323 (342)
Q Consensus 249 ~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~-----~~L~~~~nvi~TPHia~ 323 (342)
+|+++|+++.|++||+|++|||+|||+++|++||++||++|+|+||+||||++||++. +|||++|||++|||+||
T Consensus 221 ~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~ 300 (416)
T 3k5p_A 221 STSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGG 300 (416)
T ss_dssp ---CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTT
T ss_pred HHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999753 58999999999999999
Q ss_pred CcHHHHHHHHHHHHhhhc
Q 019328 324 ASKWTREGMATLAALNVL 341 (342)
Q Consensus 324 ~t~~~~~~~~~~~~~ni~ 341 (342)
+|.|++++++..+++|+.
T Consensus 301 ~T~ea~~~~~~~~~~nl~ 318 (416)
T 3k5p_A 301 STEEAQERIGTEVTRKLV 318 (416)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999999984
No 5
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.8e-70 Score=521.38 Aligned_cols=301 Identities=29% Similarity=0.419 Sum_probs=237.8
Q ss_pred CCCCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEE
Q 019328 12 PNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (342)
Q Consensus 12 ~~~~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~ 91 (342)
+|+++|||++.++++. ..+.|++ ++++..... ..+++++.+.+. ++|+++++..+++++++++++|+| |+|+
T Consensus 27 ~~~~~~vl~~~~~~~~-~~~~L~~-~~~v~~~~~---~~~~~~~~~~~~-~~d~li~~~~~~i~~~~l~~~p~L--k~I~ 98 (340)
T 4dgs_A 27 RNVKPDLLLVEPMMPF-VMDELQR-NYSVHRLYQ---AADRPALEAALP-SIRAVATGGGAGLSNEWMEKLPSL--GIIA 98 (340)
T ss_dssp ------CEECSCCCHH-HHHTHHH-HSCCEETTC---GGGHHHHHHHGG-GCCEEEEETTTCBCHHHHHHCSSC--CEEE
T ss_pred CCCCCEEEEECCCCHH-HHHHHhc-CCcEEEeCC---CCCHHHHHHHhC-CcEEEEEcCCCCCCHHHHhhCCCC--EEEE
Confidence 4578899999999874 4567755 455553321 235778877775 699999987788999999999987 9999
Q ss_pred EcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEE
Q 019328 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (342)
Q Consensus 92 ~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIi 171 (342)
+.|+|+|+||+++|+++||.|+|+||+++++||||++++||+++|++..+++.+|+|.|..+. ....|++|+|||||||
T Consensus 99 ~~g~G~d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~-~~~~~~~l~gktiGII 177 (340)
T 4dgs_A 99 INGVGTDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGE-QLPLGHSPKGKRIGVL 177 (340)
T ss_dssp EESSCCTTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC-------CCCCCCTTCEEEEE
T ss_pred ECCCCccccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCccccc-CcCccccccCCEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999986531 1235789999999999
Q ss_pred ccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccc
Q 019328 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (342)
Q Consensus 172 G~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~ 251 (342)
|+|+||+.+|+++ ++|||+|++|||++... .......++++++++||+|++|+|+|++|+
T Consensus 178 GlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~-------------------~~~~~~~sl~ell~~aDvVil~vP~t~~t~ 237 (340)
T 4dgs_A 178 GLGQIGRALASRA-EAFGMSVRYWNRSTLSG-------------------VDWIAHQSPVDLARDSDVLAVCVAASAATQ 237 (340)
T ss_dssp CCSHHHHHHHHHH-HTTTCEEEEECSSCCTT-------------------SCCEECSSHHHHHHTCSEEEECC-------
T ss_pred CCCHHHHHHHHHH-HHCCCEEEEEcCCcccc-------------------cCceecCCHHHHHhcCCEEEEeCCCCHHHH
Confidence 9999999999997 79999999999986531 112235689999999999999999999999
Q ss_pred cccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCceEEcCCCCCCcHHHHHH
Q 019328 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREG 331 (342)
Q Consensus 252 ~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi~TPHia~~t~~~~~~ 331 (342)
++++++.|+.||+|++|||+|||+++|+++|++||++|+|+||+||||++||++++|||++|||++|||+||+|.+++++
T Consensus 238 ~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHia~~t~e~~~~ 317 (340)
T 4dgs_A 238 NIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMA 317 (340)
T ss_dssp ---CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSSCSSCCHHHHHH
T ss_pred HHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCcCCcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHhhhc
Q 019328 332 MATLAALNVL 341 (342)
Q Consensus 332 ~~~~~~~ni~ 341 (342)
|...+++||.
T Consensus 318 ~~~~~~~nl~ 327 (340)
T 4dgs_A 318 MGKLVLANLA 327 (340)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 6
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=1.9e-68 Score=522.35 Aligned_cols=301 Identities=25% Similarity=0.343 Sum_probs=260.7
Q ss_pred CCCCeEEEEeCCCCchHHHHHHHhCCC-eEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceE
Q 019328 12 PNGKYRVVSTKPMPGTRWINLLIEQDC-RVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAF 90 (342)
Q Consensus 12 ~~~~~kvl~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i 90 (342)
|+.||||++++++++. ..+.|++.++ ++++.. ...+++++.+.+. ++|++++++.+++++++++++|+| |+|
T Consensus 1 ~~~~~kil~~~~~~~~-~~~~l~~~~~~~v~~~~---~~~~~~~l~~~~~-~~d~l~~~~~~~~~~~~l~~~~~L--k~I 73 (404)
T 1sc6_A 1 EKDKIKFLLVEGVHQK-ALESLRAAGYTNIEFHK---GALDDEQLKESIR-DAHFIGLRSRTHLTEDVINAAEKL--VAI 73 (404)
T ss_dssp CCSSCCEEECSCCCHH-HHHHHHHTTCCCEEECS---SCCCHHHHHHHTT-SCSEEEECSSCCBCHHHHHHCSSC--CEE
T ss_pred CCCceEEEEeCCCCHH-HHHHHHhCCCcEEEEcC---CCCCHHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--cEE
Confidence 4567899999888764 4677877777 676532 2467899988887 599999888889999999999997 999
Q ss_pred EEcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEE
Q 019328 91 SNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV 170 (342)
Q Consensus 91 ~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGI 170 (342)
+++|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|++..+++.+++|.|..+ .+.|.+|+|||+||
T Consensus 74 ~~~~~G~d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~---~~~~~el~gktlGi 150 (404)
T 1sc6_A 74 GAFAIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKL---AAGSFEARGKKLGI 150 (404)
T ss_dssp EECSSCCTTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC--------CCCSTTCEEEE
T ss_pred EECCcccCccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCcccc---CCCccccCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999999999988532 23578999999999
Q ss_pred EccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccc
Q 019328 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (342)
Q Consensus 171 iG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t 250 (342)
||+|+||+.+|+++ ++|||+|++|||+.... .. +.....++++++++||+|++|+|+|++|
T Consensus 151 IGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~-----------------~~-~~~~~~~l~ell~~aDvV~l~~P~t~~t 211 (404)
T 1sc6_A 151 IGYGHIGTQLGILA-ESLGMYVYFYDIENKLP-----------------LG-NATQVQHLSDLLNMSDVVSLHVPENPST 211 (404)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCCC-----------------CT-TCEECSCHHHHHHHCSEEEECCCSSTTT
T ss_pred EeECHHHHHHHHHH-HHCCCEEEEEcCCchhc-----------------cC-CceecCCHHHHHhcCCEEEEccCCChHH
Confidence 99999999999997 79999999999975421 00 1223468999999999999999999999
Q ss_pred ccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCC-----CCCccCCCceEEcCCCCCCc
Q 019328 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-----KPGLSEMKNAIVVPHIASAS 325 (342)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-----~~~L~~~~nvi~TPHia~~t 325 (342)
+++|+++.|++||+|++|||+|||+++|+++|+++|++|+++||+||||++||++ ++|||++|||++|||+|++|
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T 291 (404)
T 1sc6_A 212 KNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGST 291 (404)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCS
T ss_pred HHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999975 35999999999999999999
Q ss_pred HHHHHHHHHHHHhhhc
Q 019328 326 KWTREGMATLAALNVL 341 (342)
Q Consensus 326 ~~~~~~~~~~~~~ni~ 341 (342)
.+++++++..+++|+.
T Consensus 292 ~ea~~~~~~~~~~nl~ 307 (404)
T 1sc6_A 292 QEAQENIGLEVAGKLI 307 (404)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999984
No 7
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=1.4e-68 Score=512.32 Aligned_cols=301 Identities=27% Similarity=0.409 Sum_probs=258.2
Q ss_pred CeEEEEeCCCCc-hHHHHH-HHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHH-HHHHhhccCCceEE
Q 019328 15 KYRVVSTKPMPG-TRWINL-LIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGET-LFAALSRAGGKAFS 91 (342)
Q Consensus 15 ~~kvl~~~~~~~-~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~-~~~~~~~l~~k~i~ 91 (342)
||||++....+. ..+.+. +++.++++..... ..+ +++.+.+. ++|+++++..++++++ +++++|+.++|+|+
T Consensus 1 Mmki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~-~~~~~~~~-~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~ 75 (343)
T 2yq5_A 1 MTKIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQ---ALT-SATVDLAE-GCSSVSLKPLGPVDEEVVYQKLSEYGVKCIG 75 (343)
T ss_dssp -CEEEEESCCGGGHHHHHHHHHHHTCEEEEESS---CCS-TTGGGGGT-TCSEEEECCSSCBCCHHHHHHHHHTTCCEEE
T ss_pred CceEEEEecCcccHHHHHHHHHhCCeEEEECCC---CCC-HHHHHHhc-CCcEEEEcCCCCcCHHHHHHhccccCceEEE
Confidence 478888764333 233443 3456777765432 223 45566666 5999999877899999 99999875669999
Q ss_pred EcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHH-cCCCCCCCCCcccccccCCCEEEE
Q 019328 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMR-AGLYDGWLPNLFVGNLLKGQTVGV 170 (342)
Q Consensus 92 ~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~-~g~w~~w~~~~~~g~~l~gktvGI 170 (342)
+.|+|+|+||+++|+++||.|+|+||+++++||||++++||++.|++..+++.++ +|.|. |.. ...|++|+||||||
T Consensus 76 ~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~-w~~-~~~~~~l~gktvgI 153 (343)
T 2yq5_A 76 LRIVGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFT-WPS-NLISNEIYNLTVGL 153 (343)
T ss_dssp ESSSCCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCC-CCG-GGCBCCGGGSEEEE
T ss_pred ECceeecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcc-ccc-CCCccccCCCeEEE
Confidence 9999999999999999999999999999999999999999999999999999999 99885 743 35678999999999
Q ss_pred EccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccc
Q 019328 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (342)
Q Consensus 171 iG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t 250 (342)
||+|.||+.+|+++ ++|||+|++|||++.+..+ . . ....++++++++||+|++|+|+|++|
T Consensus 154 iGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~-------------~----~-~~~~~l~ell~~aDvV~l~~Plt~~t 214 (343)
T 2yq5_A 154 IGVGHIGSAVAEIF-SAMGAKVIAYDVAYNPEFE-------------P----F-LTYTDFDTVLKEADIVSLHTPLFPST 214 (343)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCGGGT-------------T----T-CEECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EecCHHHHHHHHHH-hhCCCEEEEECCChhhhhh-------------c----c-ccccCHHHHHhcCCEEEEcCCCCHHH
Confidence 99999999999997 7999999999998754110 0 1 12359999999999999999999999
Q ss_pred ccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCC--CC------------CCccCCCceE
Q 019328 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY--MK------------PGLSEMKNAI 316 (342)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~--~~------------~~L~~~~nvi 316 (342)
+++|+++.|+.||+|++|||+|||+++|++||++||++|+|+||+||||++||+ +. +|||++|||+
T Consensus 215 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvi 294 (343)
T 2yq5_A 215 ENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVV 294 (343)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEE
T ss_pred HHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEE
Confidence 999999999999999999999999999999999999999999999999999993 33 2799999999
Q ss_pred EcCCCCCCcHHHHHHHHHHHHhhhc
Q 019328 317 VVPHIASASKWTREGMATLAALNVL 341 (342)
Q Consensus 317 ~TPHia~~t~~~~~~~~~~~~~ni~ 341 (342)
+|||+|++|.+++++|...+++||.
T Consensus 295 lTPHia~~t~ea~~~~~~~~~~ni~ 319 (343)
T 2yq5_A 295 ITPHSAFYTETSIRNMVQICLTDQL 319 (343)
T ss_dssp ECSSCTTCBHHHHHHHHHHHHHHHH
T ss_pred ECCccccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999984
No 8
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=1.5e-67 Score=506.95 Aligned_cols=292 Identities=22% Similarity=0.248 Sum_probs=256.4
Q ss_pred HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecC--CcCccHHHHHHhhccCCceEEEcccccCccChhHHH
Q 019328 29 WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (342)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~--~~~~~~~~~~~~~~l~~k~i~~~g~G~d~id~~~a~ 106 (342)
..+.|++.|+++.+..... .+.+++.+.+. ++|++|++. ..++++++++++|+| |+|++.|+|+||||+++|+
T Consensus 32 ~~~~L~~~g~ev~~~~~~~--~~~~~~~~~~~-~ad~li~~~~~~~~~~~~~l~~~p~L--k~i~~~g~G~d~id~~~a~ 106 (351)
T 3jtm_A 32 IRDWLESQGHQYIVTDDKE--GPDCELEKHIP-DLHVLISTPFHPAYVTAERIKKAKNL--KLLLTAGIGSDHIDLQAAA 106 (351)
T ss_dssp CHHHHHHTTCEEEEESCCS--STTSHHHHHTT-TCSEEEECTTSCCCBCHHHHHHCSSC--CEEEESSSCCTTBCHHHHH
T ss_pred HHHHHHHCCCEEEEeCCCC--CCHHHHHHHhC-CCEEEEEccCCCCCCCHHHHhhCCCC--eEEEEeCeeecccCHHHHH
Confidence 4677888899987654332 25568888887 599999864 356899999999987 9999999999999999999
Q ss_pred hCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccChHHHHHHHHHHh
Q 019328 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (342)
Q Consensus 107 ~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~IG~~vA~~l~~ 186 (342)
++||.|+|+||+|+.+||||++++||++.|++..+++.+++|.|... .....+++|+|+||||||+|+||+.+|+++ +
T Consensus 107 ~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~-~~~~~~~~l~gktvGIIG~G~IG~~vA~~l-~ 184 (351)
T 3jtm_A 107 AAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVA-GIAYRAYDLEGKTIGTVGAGRIGKLLLQRL-K 184 (351)
T ss_dssp HTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHH-HHHTTCCCSTTCEEEEECCSHHHHHHHHHH-G
T ss_pred hcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccc-cccCCcccccCCEEeEEEeCHHHHHHHHHH-H
Confidence 99999999999999999999999999999999999999999988521 111236799999999999999999999997 7
Q ss_pred cCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCc
Q 019328 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEA 266 (342)
Q Consensus 187 a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~ga 266 (342)
+|||+|++|||++.+.... .. .+.....++++++++||+|++|+|+|++|+++|+++.|+.||+|+
T Consensus 185 ~~G~~V~~~dr~~~~~~~~--~~------------~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~ga 250 (351)
T 3jtm_A 185 PFGCNLLYHDRLQMAPELE--KE------------TGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGV 250 (351)
T ss_dssp GGCCEEEEECSSCCCHHHH--HH------------HCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTE
T ss_pred HCCCEEEEeCCCccCHHHH--Hh------------CCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCC
Confidence 9999999999986332111 00 112234689999999999999999999999999999999999999
Q ss_pred EEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCC-CCccCCCceEEcCCCCCCcHHHHHHHHHHHHhhhc
Q 019328 267 ILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIASASKWTREGMATLAALNVL 341 (342)
Q Consensus 267 ilIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~-~~L~~~~nvi~TPHia~~t~~~~~~~~~~~~~ni~ 341 (342)
+|||+|||+++|++||++||++|+|+||+||||++||++. +|||++|||++|||+||.|.+++.++...+++|+.
T Consensus 251 ilIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~ 326 (351)
T 3jtm_A 251 LIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLE 326 (351)
T ss_dssp EEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHH
T ss_pred EEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999764 79999999999999999999999999999999974
No 9
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=5.3e-68 Score=505.26 Aligned_cols=294 Identities=20% Similarity=0.238 Sum_probs=254.8
Q ss_pred CeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHH-HHhhccCCceEEEc
Q 019328 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLF-AALSRAGGKAFSNM 93 (342)
Q Consensus 15 ~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~-~~~~~l~~k~i~~~ 93 (342)
|+|||++.++++ ++.+.|++.++++++....+ .+.++ +. ++|+++++.. ++ ++++ +++|+| |+|++.
T Consensus 1 m~kil~~~~~~~-~~~~~L~~~~~~~~~~~~~~--~~~~~----~~-~ad~l~~~~~-~~-~~~l~~~~~~L--k~I~~~ 68 (324)
T 3evt_A 1 MSLVLMAQATKP-EQLQQLQTTYPDWTFKDAAA--VTAAD----YD-QIEVMYGNHP-LL-KTILARPTNQL--KFVQVI 68 (324)
T ss_dssp -CEEEECSCCCH-HHHHHHHHHCTTCEEEETTS--CCTTT----GG-GEEEEESCCT-HH-HHHHHSTTCCC--CEEECS
T ss_pred CcEEEEecCCCH-HHHHHHHhhCCCeEEecCCc--cChHH----hC-CcEEEEECCc-Ch-HHHHHhhCCCc--eEEEEC
Confidence 478999999987 46788888776554432221 23333 23 5898887643 46 8888 678987 999999
Q ss_pred ccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHH-HHHHHcCCCCCCCCCcccccccCCCEEEEEc
Q 019328 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEA-DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (342)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~-~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG 172 (342)
|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+ ++.+++|.|.... .+++|+||||||||
T Consensus 69 ~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~----~~~~l~gktvGIiG 144 (324)
T 3evt_A 69 SAGVDYLPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPM----TTSTLTGQQLLIYG 144 (324)
T ss_dssp SSCCTTSCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSS----CCCCSTTCEEEEEC
T ss_pred CccccccCHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCC----CCccccCCeEEEEC
Confidence 999999999999999999999999999999999999999999999999 9999999875421 47899999999999
Q ss_pred cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccccc
Q 019328 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (342)
Q Consensus 173 ~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~ 252 (342)
+|.||+.+|+++ ++|||+|++|||++.... . .. ......++++++++||+|++|+|+|++|++
T Consensus 145 lG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~--------------~-~~-~~~~~~~l~ell~~aDvV~l~lPlt~~t~~ 207 (324)
T 3evt_A 145 TGQIGQSLAAKA-SALGMHVIGVNTTGHPAD--------------H-FH-ETVAFTATADALATANFIVNALPLTPTTHH 207 (324)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEEESSCCCCT--------------T-CS-EEEEGGGCHHHHHHCSEEEECCCCCGGGTT
T ss_pred cCHHHHHHHHHH-HhCCCEEEEECCCcchhH--------------h-Hh-hccccCCHHHHHhhCCEEEEcCCCchHHHH
Confidence 999999999997 799999999999865310 0 00 012246899999999999999999999999
Q ss_pred ccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCC-CCCccCCCceEEcCCCCCCcHHHHHH
Q 019328 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASKWTREG 331 (342)
Q Consensus 253 li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvi~TPHia~~t~~~~~~ 331 (342)
+|+++.|+.||+|++|||+|||+++|++||++||++|+|+||+||||++||++ ++|||++|||++|||+||.|.+++++
T Consensus 208 li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~ 287 (324)
T 3evt_A 208 LFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRAT 287 (324)
T ss_dssp CBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHH
T ss_pred hcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999976 47999999999999999999999999
Q ss_pred HHHHHHhhhc
Q 019328 332 MATLAALNVL 341 (342)
Q Consensus 332 ~~~~~~~ni~ 341 (342)
+...+++||.
T Consensus 288 ~~~~~~~nl~ 297 (324)
T 3evt_A 288 VFPIFAANFA 297 (324)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 10
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=6.3e-67 Score=503.08 Aligned_cols=303 Identities=27% Similarity=0.391 Sum_probs=263.0
Q ss_pred CeEEEEeCCCCchH----HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEe-cCCcCccHHHHHHhhccCCce
Q 019328 15 KYRVVSTKPMPGTR----WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIG-QLTEDWGETLFAALSRAGGKA 89 (342)
Q Consensus 15 ~~kvl~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~-~~~~~~~~~~~~~~~~l~~k~ 89 (342)
+|||++.+.+.... ..+.++ +++++++.. ...+++++.+.+. ++|++++ +...++++++++++|+| |+
T Consensus 2 smki~~~d~~~~~~~~~~~~~~l~--~~~v~~~~~--~~~~~~~l~~~~~-~ad~li~~~~~~~~~~~~l~~~~~L--k~ 74 (352)
T 3gg9_A 2 SLKIAVLDDYQDAVRKLDCFSLLQ--DHEVKVFNN--TVKGVGQLAARVA-DVEALVLIRERTRVTRQLLDRLPKL--KI 74 (352)
T ss_dssp CCEEEECCCTTCCGGGSGGGGGGT--TSEEEECCS--CCCSHHHHHHHTT-TCSEEEECTTSSCBCHHHHTTCTTC--CE
T ss_pred ceEEEEEcCccccchhhhhhhhhc--CceEEEecC--CCCCHHHHHHHhc-CCeEEEEeCCCCCCCHHHHhhCCCC--eE
Confidence 37899887765421 112332 467765432 2347888988887 5999998 56678999999999987 99
Q ss_pred EEEccccc----CccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCC-------CCCCcc
Q 019328 90 FSNMAVGY----NNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDG-------WLPNLF 158 (342)
Q Consensus 90 i~~~g~G~----d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~-------w~~~~~ 158 (342)
|++.|+|+ |+||+++|+++||.|+|+||+ +.+||||++++||++.|++..+++.+++|.|.. |.+...
T Consensus 75 I~~~g~G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~ 153 (352)
T 3gg9_A 75 ISQTGRVSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFG 153 (352)
T ss_dssp EEESSCCCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTT
T ss_pred EEEeCcccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccc
Confidence 99999999 999999999999999999999 999999999999999999999999999999964 433334
Q ss_pred cccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCC
Q 019328 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 159 ~g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sD 238 (342)
.|++|+||||||||+|.||+.+|+++ ++|||+|++|||+.+..... . .+.....++++++++||
T Consensus 154 ~~~~l~g~tvGIIGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~---~------------~g~~~~~~l~ell~~aD 217 (352)
T 3gg9_A 154 IGRVLKGQTLGIFGYGKIGQLVAGYG-RAFGMNVLVWGRENSKERAR---A------------DGFAVAESKDALFEQSD 217 (352)
T ss_dssp SBCCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSHHHHHHHH---H------------TTCEECSSHHHHHHHCS
T ss_pred cCccCCCCEEEEEeECHHHHHHHHHH-HhCCCEEEEECCCCCHHHHH---h------------cCceEeCCHHHHHhhCC
Confidence 57899999999999999999999997 79999999999986432110 0 11223459999999999
Q ss_pred EEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCC-CCCccCCCceEE
Q 019328 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIV 317 (342)
Q Consensus 239 iV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvi~ 317 (342)
+|++|+|+|++|+++|+++.|+.||+|++|||+|||+++|+++|++||++|+|+||+||||++||++ ++|||++|||++
T Consensus 218 iV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvil 297 (352)
T 3gg9_A 218 VLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCIC 297 (352)
T ss_dssp EEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEE
T ss_pred EEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999986 589999999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhc
Q 019328 318 VPHIASASKWTREGMATLAALNVL 341 (342)
Q Consensus 318 TPHia~~t~~~~~~~~~~~~~ni~ 341 (342)
|||+||.|.++++++...+++||.
T Consensus 298 TPHia~~t~e~~~~~~~~~~~ni~ 321 (352)
T 3gg9_A 298 TPHIGYVERESYEMYFGIAFQNIL 321 (352)
T ss_dssp CCSCTTCBHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999984
No 11
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=2.6e-67 Score=499.93 Aligned_cols=293 Identities=23% Similarity=0.259 Sum_probs=255.3
Q ss_pred CCeEEEEeCCCCchHHHHHH-HhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEE
Q 019328 14 GKYRVVSTKPMPGTRWINLL-IEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (342)
Q Consensus 14 ~~~kvl~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~ 92 (342)
.||||+++.+..+ .|.+.| ++..+++++... .+.+++.+.+. ++|++++.. ++++++++++|+| |+|++
T Consensus 4 ~~mkili~~~~~~-~~~~~L~~~~~p~~~~~~~----~~~~~~~~~~~-~ad~li~~~--~~~~~~l~~~~~L--k~I~~ 73 (324)
T 3hg7_A 4 SQRTLLLLSQDNA-HYERLLKAAHLPHLRILRA----DNQSDAEKLIG-EAHILMAEP--ARAKPLLAKANKL--SWFQS 73 (324)
T ss_dssp CCEEEEEESTTHH-HHHHHHHHSCCTTEEEEEC----SSHHHHHHHGG-GCSEEEECH--HHHGGGGGGCTTC--CEEEE
T ss_pred cccEEEEecCCCH-HHHHHHhhccCCCeEEEeC----CChhHHHHHhC-CCEEEEECC--CCCHHHHhhCCCc--eEEEE
Confidence 3589999998875 578888 666667765433 24677777777 599999853 4567788889987 99999
Q ss_pred cccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEc
Q 019328 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (342)
Q Consensus 93 ~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG 172 (342)
.|+|+|+||++++++ ||.|+|+||+++.+||||++++||++.|++..+++.+++|.|... .+++|+|+||||||
T Consensus 74 ~~~G~d~id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~-----~~~~l~g~tvGIIG 147 (324)
T 3hg7_A 74 TYAGVDVLLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSH-----PYQGLKGRTLLILG 147 (324)
T ss_dssp SSSCCGGGSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-----CCCCSTTCEEEEEC
T ss_pred CCCCCCccChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCC-----CCcccccceEEEEE
Confidence 999999999998865 999999999999999999999999999999999999999988532 35799999999999
Q ss_pred cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccccc
Q 019328 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (342)
Q Consensus 173 ~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~ 252 (342)
+|.||+.+|+++ ++|||+|++|||++.... . . .......++++++++||+|++|+|+|++|++
T Consensus 148 lG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~--------------~-~-~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~ 210 (324)
T 3hg7_A 148 TGSIGQHIAHTG-KHFGMKVLGVSRSGRERA--------------G-F-DQVYQLPALNKMLAQADVIVSVLPATRETHH 210 (324)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCCCT--------------T-C-SEEECGGGHHHHHHTCSEEEECCCCCSSSTT
T ss_pred ECHHHHHHHHHH-HhCCCEEEEEcCChHHhh--------------h-h-hcccccCCHHHHHhhCCEEEEeCCCCHHHHH
Confidence 999999999997 799999999999864310 0 0 0112346899999999999999999999999
Q ss_pred ccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCC-CCCccCCCceEEcCCCCCCcHHHHHH
Q 019328 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASKWTREG 331 (342)
Q Consensus 253 li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvi~TPHia~~t~~~~~~ 331 (342)
+|+++.|+.||+|++|||+|||+++|+++|++||++|+|+||+||||++||++ ++|||++|||++|||+||+|.+ ++
T Consensus 211 li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~ 288 (324)
T 3hg7_A 211 LFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--DD 288 (324)
T ss_dssp SBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH--HH
T ss_pred HhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH--HH
Confidence 99999999999999999999999999999999999999999999999999976 4799999999999999999976 47
Q ss_pred HHHHHHhhhc
Q 019328 332 MATLAALNVL 341 (342)
Q Consensus 332 ~~~~~~~ni~ 341 (342)
+...+++|+.
T Consensus 289 ~~~~~~~nl~ 298 (324)
T 3hg7_A 289 VAQIFVRNYI 298 (324)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 12
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=7.2e-67 Score=499.80 Aligned_cols=298 Identities=29% Similarity=0.377 Sum_probs=257.2
Q ss_pred eEEEEeCCCCc-hHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEcc
Q 019328 16 YRVVSTKPMPG-TRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (342)
Q Consensus 16 ~kvl~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g 94 (342)
|||++....+. ..+.+.+.+ .+++++... . ..+++.+.+. ++|+++++..+++++++++++|+| |+|++.|
T Consensus 1 Mki~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~-~~~e~~~~~~-~~d~li~~~~~~i~~~~l~~~~~L--k~I~~~~ 72 (334)
T 2pi1_A 1 MNVLFTSVPQEDVPFYQEALK-DLSLKIYTT---D-VSKVPENELK-KAELISVFVYDKLTEELLSKMPRL--KLIHTRS 72 (334)
T ss_dssp CEEEECSCCTTHHHHHHHHTT-TSEEEECSS---C-GGGSCHHHHH-HCSEEEECTTSCBCHHHHTTCTTC--CEEEESS
T ss_pred CEEEEEccChhhHHHHHHHhh-cCCEEEECC---C-CcHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--eEEEECC
Confidence 47777554433 234454433 346665221 1 2356666776 599999987789999999999997 9999999
Q ss_pred cccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccC
Q 019328 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (342)
Q Consensus 95 ~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G 174 (342)
+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|. |.. ...|++|+|+||||||+|
T Consensus 73 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~tvgIiG~G 150 (334)
T 2pi1_A 73 VGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFS-QDS-EILARELNRLTLGVIGTG 150 (334)
T ss_dssp SCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC-CCG-GGCBCCGGGSEEEEECCS
T ss_pred ccccccCHHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCc-ccc-CccceeccCceEEEECcC
Confidence 999999999999999999999999999999999999999999999999999999985 431 235789999999999999
Q ss_pred hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccccccc
Q 019328 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (342)
Q Consensus 175 ~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li 254 (342)
.||+++|+++ ++|||+|++|||++.+...+ .+. ...++++++++||+|++|+|+|++|+++|
T Consensus 151 ~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~----------------~g~-~~~~l~ell~~aDvV~l~~P~t~~t~~li 212 (334)
T 2pi1_A 151 RIGSRVAMYG-LAFGMKVLCYDVVKREDLKE----------------KGC-VYTSLDELLKESDVISLHVPYTKETHHMI 212 (334)
T ss_dssp HHHHHHHHHH-HHTTCEEEEECSSCCHHHHH----------------TTC-EECCHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred HHHHHHHHHH-HHCcCEEEEECCCcchhhHh----------------cCc-eecCHHHHHhhCCEEEEeCCCChHHHHhh
Confidence 9999999997 79999999999987653211 011 23579999999999999999999999999
Q ss_pred CHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCC----------------CCCCccCCCceEEc
Q 019328 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY----------------MKPGLSEMKNAIVV 318 (342)
Q Consensus 255 ~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~----------------~~~~L~~~~nvi~T 318 (342)
+++.|+.||+|++|||+|||+++|+++|++||++|+|+||+||||++||+ .++|||++|||++|
T Consensus 213 ~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilT 292 (334)
T 2pi1_A 213 NEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIIT 292 (334)
T ss_dssp CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEEC
T ss_pred CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEEC
Confidence 99999999999999999999999999999999999999999999999997 24689999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhc
Q 019328 319 PHIASASKWTREGMATLAALNVL 341 (342)
Q Consensus 319 PHia~~t~~~~~~~~~~~~~ni~ 341 (342)
||+|++|.++++++...+++||.
T Consensus 293 PHia~~t~e~~~~~~~~~~~ni~ 315 (334)
T 2pi1_A 293 PHIAYYTDKSLERIREETVKVVK 315 (334)
T ss_dssp CSCTTCBHHHHHHHHHHHHHHHH
T ss_pred CccccChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999984
No 13
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-65 Score=491.54 Aligned_cols=302 Identities=28% Similarity=0.437 Sum_probs=265.7
Q ss_pred CCCCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEE
Q 019328 12 PNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (342)
Q Consensus 12 ~~~~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~ 91 (342)
++.++||+++.++++. ..+.+++.++++.... ..+.+++.+.+. ++|+++++..+++++++++++|+| |+|+
T Consensus 23 ~~~~~~vli~~~~~~~-~~~~l~~~~~~v~~~~----~~~~~~~~~~~~-~~d~li~~~~~~~~~~~l~~~~~L--k~I~ 94 (335)
T 2g76_A 23 MANLRKVLISDSLDPC-CRKILQDGGLQVVEKQ----NLSKEELIAELQ-DCEGLIVRSATKVTADVINAAEKL--QVVG 94 (335)
T ss_dssp ---CCEEEECSCCCHH-HHHHHHHHTCEEEECC----SCCHHHHHHHGG-GCSEEEECSSSCBCHHHHHHCSSC--CEEE
T ss_pred hccceEEEEcCCCCHH-HHHHHHhCCCEEEECC----CCCHHHHHHHhc-CceEEEEcCCCCCCHHHHhhCCCC--cEEE
Confidence 4556789999887753 4667777667765422 246888888887 599999887778999999999987 9999
Q ss_pred EcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEE
Q 019328 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (342)
Q Consensus 92 ~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIi 171 (342)
+.|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|.. ....+.+++|+|||||
T Consensus 95 ~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~---~~~~~~~l~g~tvgII 171 (335)
T 2g76_A 95 RAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWER---KKFMGTELNGKTLGIL 171 (335)
T ss_dssp ESSSSCTTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCT---GGGCBCCCTTCEEEEE
T ss_pred ECCCCcchhChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCc---cCCCCcCCCcCEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999998752 2235789999999999
Q ss_pred ccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccc
Q 019328 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (342)
Q Consensus 172 G~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~ 251 (342)
|+|.||+.+|+++ ++|||+|++|||+..+... ..+ +.. ..++++++++||+|++|+|++++|+
T Consensus 172 GlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~---~~~------------g~~-~~~l~ell~~aDvV~l~~P~t~~t~ 234 (335)
T 2g76_A 172 GLGRIGREVATRM-QSFGMKTIGYDPIISPEVS---ASF------------GVQ-QLPLEEIWPLCDFITVHTPLLPSTT 234 (335)
T ss_dssp CCSHHHHHHHHHH-HTTTCEEEEECSSSCHHHH---HHT------------TCE-ECCHHHHGGGCSEEEECCCCCTTTT
T ss_pred eECHHHHHHHHHH-HHCCCEEEEECCCcchhhh---hhc------------Cce-eCCHHHHHhcCCEEEEecCCCHHHH
Confidence 9999999999997 7999999999998754211 111 111 2589999999999999999999999
Q ss_pred cccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCceEEcCCCCCCcHHHHHH
Q 019328 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREG 331 (342)
Q Consensus 252 ~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi~TPHia~~t~~~~~~ 331 (342)
++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||++++|||++|||++|||+|++|.+++++
T Consensus 235 ~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e~~~~ 314 (335)
T 2g76_A 235 GLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSR 314 (335)
T ss_dssp TSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHHHHHH
T ss_pred HhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997778999999999999999999999999
Q ss_pred HHHHHHhhhc
Q 019328 332 MATLAALNVL 341 (342)
Q Consensus 332 ~~~~~~~ni~ 341 (342)
+...+++|+.
T Consensus 315 ~~~~~~~nl~ 324 (335)
T 2g76_A 315 CGEEIAVQFV 324 (335)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 14
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=1.2e-66 Score=502.21 Aligned_cols=306 Identities=21% Similarity=0.287 Sum_probs=248.6
Q ss_pred EEeCCCCCeEEEEeCCCCch-------HHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHH
Q 019328 8 EVWNPNGKYRVVSTKPMPGT-------RWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFA 80 (342)
Q Consensus 8 ~~~~~~~~~kvl~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 80 (342)
+++-+++.+++++..+.+.. ...+.|++. +++.... ..+.+++.+.+..++++++. ..++++++++
T Consensus 20 ~~~m~~~~r~ivll~~~~~~~~~~~~~~~~~~L~~~-~~v~~~~----~~~~~e~~~~~~~~~~~i~~--~~~i~~~~l~ 92 (365)
T 4hy3_A 20 FQSMTNTERPLAISAPEPRSLDLIFSDEARAALHSK-YEIVEAD----PENIAGLGDDILGRARYIIG--QPPLSAETLA 92 (365)
T ss_dssp --------CCEEEEECTTSCHHHHCCHHHHHHHHHH-SEEEECC----GGGGGGSCTTHHHHEEEEEE--CCCCCHHHHT
T ss_pred hhhcccCCCCEEEEcCCcccccccCCHHHHHHHhCC-cEEEECC----CCChHHHHHHhhCCeEEEEe--CCCCCHHHHh
Confidence 34545556677776655331 235667665 5664321 22344544332224777774 3589999999
Q ss_pred HhhccCCceEEEc-ccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCC-cc
Q 019328 81 ALSRAGGKAFSNM-AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPN-LF 158 (342)
Q Consensus 81 ~~~~l~~k~i~~~-g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~-~~ 158 (342)
++|+| |+|++. |+|||+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+|+|.|. |... ..
T Consensus 93 ~~p~L--k~I~~~~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~-w~~~~~~ 169 (365)
T 4hy3_A 93 RMPAL--RSILNVESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTEL-WGGEGNA 169 (365)
T ss_dssp TCTTC--CEEECCSSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCC-CSSSSTT
T ss_pred hCCCC--eEEEEecccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCcc-ccccccc
Confidence 99997 999975 8999999999999999999999999999999999999999999999999999999974 6432 24
Q ss_pred cccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCC
Q 019328 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 159 ~g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sD 238 (342)
.+++|+||||||||+|.||+.+|+++ ++|||+|++|||+.+..... . .+. ...++++++++||
T Consensus 170 ~~~~l~gktvGIIGlG~IG~~vA~~l-~~fG~~V~~~d~~~~~~~~~---~------------~g~-~~~~l~ell~~aD 232 (365)
T 4hy3_A 170 SARLIAGSEIGIVGFGDLGKALRRVL-SGFRARIRVFDPWLPRSMLE---E------------NGV-EPASLEDVLTKSD 232 (365)
T ss_dssp SCCCSSSSEEEEECCSHHHHHHHHHH-TTSCCEEEEECSSSCHHHHH---H------------TTC-EECCHHHHHHSCS
T ss_pred cccccCCCEEEEecCCcccHHHHHhh-hhCCCEEEEECCCCCHHHHh---h------------cCe-eeCCHHHHHhcCC
Confidence 57899999999999999999999997 89999999999986432110 0 011 2368999999999
Q ss_pred EEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCC-CCCccCCCceEE
Q 019328 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIV 317 (342)
Q Consensus 239 iV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvi~ 317 (342)
+|++|+|+|++|+++|+++.|+.||+|++|||+|||+++|++||++||++|+|+ ||||||++||++ ++|||++|||++
T Consensus 233 vV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvil 311 (365)
T 4hy3_A 233 FIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIR 311 (365)
T ss_dssp EEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEE
T ss_pred EEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEE
Confidence 999999999999999999999999999999999999999999999999999998 999999999976 579999999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHhhhc
Q 019328 318 VPHIASASKWTREGMATLAALNVL 341 (342)
Q Consensus 318 TPHia~~t~~~~~~~~~~~~~ni~ 341 (342)
|||+||+|.+++++|...+++||.
T Consensus 312 TPHia~~t~e~~~~~~~~~~~ni~ 335 (365)
T 4hy3_A 312 SAHRAGALDSAFKKMGDMVLEDMD 335 (365)
T ss_dssp CCSCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCccccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999984
No 15
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=2.3e-64 Score=480.39 Aligned_cols=304 Identities=29% Similarity=0.497 Sum_probs=265.9
Q ss_pred CeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhc-cCCceEEEc
Q 019328 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSR-AGGKAFSNM 93 (342)
Q Consensus 15 ~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~-l~~k~i~~~ 93 (342)
|+||+++.++++. ..+.|++ .+++++... ....+++++.+.+. ++|+++++..+++++++++++|+ | |+|++.
T Consensus 1 m~~vl~~~~~~~~-~~~~l~~-~~~~~~~~~-~~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~L--k~I~~~ 74 (320)
T 1gdh_A 1 KKKILITWPLPEA-AMARARE-SYDVIAHGD-DPKITIDEMIETAK-SVDALLITLNEKCRKEVIDRIPENI--KCISTY 74 (320)
T ss_dssp CCEEEESSCCCHH-HHHHHHT-TSEEEECCS-TTCCCHHHHHHHHT-TCSEEEEETTSCBCHHHHHHSCTTC--CEEEEE
T ss_pred CcEEEEcCCCCHH-HHHHHHh-cCCEEEecC-CCCCCHHHHHHHhc-CCEEEEECCCCCCCHHHHHhCCccc--eEEEEC
Confidence 3578888887653 4567765 356654322 22357889988887 59999988767899999999998 7 999999
Q ss_pred ccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEcc
Q 019328 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (342)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~ 173 (342)
|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..|.+....+.++.|+||||||+
T Consensus 75 ~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~ 154 (320)
T 1gdh_A 75 SIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGF 154 (320)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECC
T ss_pred CcccccccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999976654344578999999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcC-ChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccccc
Q 019328 174 GRIGSAYARMMVEGFKMNLIYYDL-YQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (342)
Q Consensus 174 G~IG~~vA~~l~~a~g~~V~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~ 252 (342)
|.||+.+|+++ ++|||+|++||| ++.+... ... +.....++++++++||+|++|+|++++|++
T Consensus 155 G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~~---~~~------------g~~~~~~l~ell~~aDvVil~~p~~~~t~~ 218 (320)
T 1gdh_A 155 GSIGQALAKRA-QGFDMDIDYFDTHRASSSDE---ASY------------QATFHDSLDSLLSVSQFFSLNAPSTPETRY 218 (320)
T ss_dssp SHHHHHHHHHH-HTTTCEEEEECSSCCCHHHH---HHH------------TCEECSSHHHHHHHCSEEEECCCCCTTTTT
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCCcChhhh---hhc------------CcEEcCCHHHHHhhCCEEEEeccCchHHHh
Confidence 99999999997 799999999999 7654211 111 112234899999999999999999999999
Q ss_pred ccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCceEEcCCCCCCcHHHHHHH
Q 019328 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGM 332 (342)
Q Consensus 253 li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi~TPHia~~t~~~~~~~ 332 (342)
+++++.|+.||+|++|||+|||+++|+++|.++|++|+|+||+||||++||+.++|||++|||++|||++++|.++++++
T Consensus 219 ~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nviltPH~~~~t~~~~~~~ 298 (320)
T 1gdh_A 219 FFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQAREDM 298 (320)
T ss_dssp CBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECSSCTTCBHHHHHHH
T ss_pred hcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCEEECCcCCcCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999966689999999999999999999999999
Q ss_pred HHHHHhhhc
Q 019328 333 ATLAALNVL 341 (342)
Q Consensus 333 ~~~~~~ni~ 341 (342)
...+ +|+.
T Consensus 299 ~~~~-~nl~ 306 (320)
T 1gdh_A 299 AHQA-NDLI 306 (320)
T ss_dssp HHHH-HHHH
T ss_pred HHHH-HHHH
Confidence 9999 9984
No 16
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-64 Score=480.10 Aligned_cols=297 Identities=39% Similarity=0.599 Sum_probs=265.4
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEccc
Q 019328 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (342)
Q Consensus 16 ~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~ 95 (342)
+||+++.++++. ..+.|++.++++++.... ..+.+++.+.+. ++|+++++..+++++++++++|+| |+|++.|+
T Consensus 1 ~~vl~~~~~~~~-~~~~l~~~g~~v~~~~~~--~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~i~~~~~ 74 (311)
T 2cuk_A 1 MRVLVTRTLPGK-ALDRLRERGLEVEVHRGL--FLPKAELLKRVE-GAVGLIPTVEDRIDAEVMDRAKGL--KVIACYSV 74 (311)
T ss_dssp CEEEESSCCSSS-TTHHHHHTTCEEEECCSS--CCCHHHHHHHHT-TCSEEECCTTSCBCHHHHHHSTTC--CEEECSSS
T ss_pred CEEEEeCCCCHH-HHHHHHhcCCeEEEecCC--CCCHHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--eEEEECCc
Confidence 478888877764 356777776777654322 357788888887 599999887678999999999987 99999999
Q ss_pred ccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccCh
Q 019328 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (342)
Q Consensus 96 G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~ 175 (342)
|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..|.+....++++.|+||||||+|.
T Consensus 75 G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~ 154 (311)
T 2cuk_A 75 GVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGR 154 (311)
T ss_dssp CCTTBCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSH
T ss_pred CccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECH
Confidence 99999999999999999999999999999999999999999999999999999997665433457899999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccC
Q 019328 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLIN 255 (342)
Q Consensus 176 IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~ 255 (342)
||+.+|+++ ++|||+|++|||+..+. . ....++++++++||+|++|+|++++|+++++
T Consensus 155 IG~~~A~~l-~~~G~~V~~~d~~~~~~---------------~------~~~~~l~ell~~aDvV~l~~p~~~~t~~li~ 212 (311)
T 2cuk_A 155 IGQAVAKRA-LAFGMRVVYHARTPKPL---------------P------YPFLSLEELLKEADVVSLHTPLTPETHRLLN 212 (311)
T ss_dssp HHHHHHHHH-HHTTCEEEEECSSCCSS---------------S------SCBCCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred HHHHHHHHH-HHCCCEEEEECCCCccc---------------c------cccCCHHHHHhhCCEEEEeCCCChHHHhhcC
Confidence 999999997 79999999999986531 0 1246899999999999999999999999999
Q ss_pred HhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCC-CCCccCCCceEEcCCCCCCcHHHHHHHHH
Q 019328 256 KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASKWTREGMAT 334 (342)
Q Consensus 256 ~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvi~TPHia~~t~~~~~~~~~ 334 (342)
++.|+.||+|++|||+|||+++|+++|+++|+ |+|+||+||||++||++ ++|||++|||++|||+|++|.++++++..
T Consensus 213 ~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~ 291 (311)
T 2cuk_A 213 RERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAE 291 (311)
T ss_dssp HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999964 58999999999999999999999999999
Q ss_pred HHHhhhc
Q 019328 335 LAALNVL 341 (342)
Q Consensus 335 ~~~~ni~ 341 (342)
.+++|+.
T Consensus 292 ~~~~nl~ 298 (311)
T 2cuk_A 292 VAVENLL 298 (311)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999984
No 17
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.1e-64 Score=479.95 Aligned_cols=300 Identities=33% Similarity=0.535 Sum_probs=263.4
Q ss_pred CCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEc
Q 019328 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (342)
Q Consensus 14 ~~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~ 93 (342)
++|||+++.++++ ...+.|++.++++.. . ...+.+++.+.+. ++|+++++...++++++++++|+| |+|++.
T Consensus 2 ~~~~il~~~~~~~-~~~~~l~~~~~~~~~--~--~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~ 73 (307)
T 1wwk_A 2 KRMKVLVAAPLHE-KAIQVLKDAGLEVIY--E--EYPDEDRLVELVK-DVEAIIVRSKPKVTRRVIESAPKL--KVIARA 73 (307)
T ss_dssp --CEEEECSCCCH-HHHHHHHHTTCEEEE--C--SSCCHHHHHHHST-TCSEEEESSCSCBCHHHHTTCTTC--CEEEES
T ss_pred CceEEEEeCCCCH-HHHHHHHhCCeEEEe--C--CCCCHHHHHHHhc-CCEEEEEcCCCCCCHHHHhhCCCC--eEEEEC
Confidence 4578999888765 346777776766542 1 1346788888776 599999887667999999999987 999999
Q ss_pred ccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEcc
Q 019328 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (342)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~ 173 (342)
|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|.. ....++++.|+||||||+
T Consensus 74 ~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~---~~~~~~~l~g~~vgIiG~ 150 (307)
T 1wwk_A 74 GVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAK---KEAMGIELEGKTIGIIGF 150 (307)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCT---TTCCBCCCTTCEEEEECC
T ss_pred CccccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCc---cCcCCcccCCceEEEEcc
Confidence 99999999999999999999999999999999999999999999999999999998853 123468999999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccc
Q 019328 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (342)
Q Consensus 174 G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~l 253 (342)
|.||+.+|+++ ++|||+|++|||++.+... ... +.. ..++++++++||+|++|+|++++|+++
T Consensus 151 G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~---~~~------------g~~-~~~l~ell~~aDvV~l~~p~~~~t~~l 213 (307)
T 1wwk_A 151 GRIGYQVAKIA-NALGMNILLYDPYPNEERA---KEV------------NGK-FVDLETLLKESDVVTIHVPLVESTYHL 213 (307)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCHHHH---HHT------------TCE-ECCHHHHHHHCSEEEECCCCSTTTTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCCChhhH---hhc------------Ccc-ccCHHHHHhhCCEEEEecCCChHHhhh
Confidence 99999999997 7999999999998764211 111 111 248999999999999999999999999
Q ss_pred cCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCC-CCCccCCCceEEcCCCCCCcHHHHHHH
Q 019328 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASKWTREGM 332 (342)
Q Consensus 254 i~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvi~TPHia~~t~~~~~~~ 332 (342)
|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||++ ++|||++|||++|||+|++|.++++++
T Consensus 214 i~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~ 293 (307)
T 1wwk_A 214 INEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERA 293 (307)
T ss_dssp BCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHH
T ss_pred cCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999984 589999999999999999999999999
Q ss_pred HHHHHhhhc
Q 019328 333 ATLAALNVL 341 (342)
Q Consensus 333 ~~~~~~ni~ 341 (342)
...+++|+.
T Consensus 294 ~~~~~~nl~ 302 (307)
T 1wwk_A 294 GVEVAEKVV 302 (307)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999984
No 18
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=7.8e-65 Score=486.16 Aligned_cols=300 Identities=29% Similarity=0.426 Sum_probs=256.2
Q ss_pred eEEEEeCCCCc-hHHHHHHHhC--CCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEE
Q 019328 16 YRVVSTKPMPG-TRWINLLIEQ--DCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (342)
Q Consensus 16 ~kvl~~~~~~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~ 92 (342)
|||++....+. ..+.+.+++. ++++...... ..+++.+.+. ++|+++++..+++++++++++|+.++|+|++
T Consensus 2 mkil~~~~~~~~~~~~~~l~~~~p~~~v~~~~~~----~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 76 (333)
T 1j4a_A 2 TKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKL----LTPETVALAK-GADGVVVYQQLDYIAETLQALADNGITKMSL 76 (333)
T ss_dssp CEEEECSCCGGGHHHHHHHHHTCTTSEEEECSSC----CCTTTGGGGT-TCSEEEECCSSCBCHHHHHHHHHTTCCEEEE
T ss_pred cEEEEEecCccCHHHHHHHHhhCCCcEEEECCCC----CcHHHHHHhc-CCcEEEEcCCCCCCHHHHHhccccCCeEEEE
Confidence 57877643322 3456666643 4566543221 1235555665 5999998866789999999999834499999
Q ss_pred cccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEc
Q 019328 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (342)
Q Consensus 93 ~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG 172 (342)
.|+|+|+||+++|+++||.|+|+||+++++||||++++||++.|++..+++.+++|.|. |.. ..+++++|+||||||
T Consensus 77 ~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~--~~~~~l~g~~vgIiG 153 (333)
T 1j4a_A 77 RNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLR-WAP--TIGREVRDQVVGVVG 153 (333)
T ss_dssp SSSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCC-CTT--CCBCCGGGSEEEEEC
T ss_pred CCcccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCc-cCC--cccccCCCCEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999995 643 357899999999999
Q ss_pred cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccccc
Q 019328 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (342)
Q Consensus 173 ~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~ 252 (342)
+|.||+.+|+++ ++|||+|++|||+..+.... . .....++++++++||+|++|+|++++|++
T Consensus 154 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~~------------~-----~~~~~~l~ell~~aDvV~l~~p~~~~t~~ 215 (333)
T 1j4a_A 154 TGHIGQVFMQIM-EGFGAKVITYDIFRNPELEK------------K-----GYYVDSLDDLYKQADVISLHVPDVPANVH 215 (333)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCHHHHH------------T-----TCBCSCHHHHHHHCSEEEECSCCCGGGTT
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCcchhHHh------------h-----CeecCCHHHHHhhCCEEEEcCCCcHHHHH
Confidence 999999999997 79999999999987653110 0 11224899999999999999999999999
Q ss_pred ccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCC--CC--------C----CccCCCceEEc
Q 019328 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY--MK--------P----GLSEMKNAIVV 318 (342)
Q Consensus 253 li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~--~~--------~----~L~~~~nvi~T 318 (342)
+|+++.|+.||+|++|||+|||+++|+++|++||++|+|+||+||||++||+ +. + |||++|||++|
T Consensus 216 li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilT 295 (333)
T 1j4a_A 216 MINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVT 295 (333)
T ss_dssp CBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEEC
T ss_pred HHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEEC
Confidence 9999999999999999999999999999999999999999999999999993 21 2 59999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhc
Q 019328 319 PHIASASKWTREGMATLAALNVL 341 (342)
Q Consensus 319 PHia~~t~~~~~~~~~~~~~ni~ 341 (342)
||+|++|.++++++...+++|+.
T Consensus 296 PHia~~t~~~~~~~~~~~~~nl~ 318 (333)
T 1j4a_A 296 PKTAFYTTHAVRNMVVKAFDNNL 318 (333)
T ss_dssp SSCTTCBHHHHHHHHHHHHHHHH
T ss_pred CccccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999984
No 19
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=2.9e-65 Score=488.98 Aligned_cols=299 Identities=26% Similarity=0.403 Sum_probs=254.9
Q ss_pred eEEEEeC--CCCchHHHHHHHh-CCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEE
Q 019328 16 YRVVSTK--PMPGTRWINLLIE-QDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (342)
Q Consensus 16 ~kvl~~~--~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~ 92 (342)
|||++.. +.. ..+.+.+.+ .++++...... ..+++.+.+. ++|+++++..+++++++++++|+.++|+|++
T Consensus 1 Mkil~~~~~~~~-~~~~~~l~~~~~~~v~~~~~~----~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 74 (333)
T 1dxy_A 1 MKIIAYGARVDE-IQYFKQWAKDTGNTLEYHTEF----LDENTVEWAK-GFDGINSLQTTPYAAGVFEKMHAYGIKFLTI 74 (333)
T ss_dssp CEEEECSCCTTT-HHHHHHHHHHHCCEEEECSSC----CCTTGGGGGT-TCSEEEECCSSCBCHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEeccccC-HHHHHHHHHhCCeEEEEcCCC----ChHHHHHHhc-CCeEEEEcCCCCCCHHHHHhCcccCceEEEE
Confidence 4677753 333 345566643 46666543221 2245555565 5999999877789999999999834499999
Q ss_pred cccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEc
Q 019328 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (342)
Q Consensus 93 ~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG 172 (342)
.|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|. |.. ...++++.|+||||||
T Consensus 75 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~~vgIiG 152 (333)
T 1dxy_A 75 RNVGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYE-KAG-TFIGKELGQQTVGVMG 152 (333)
T ss_dssp SSSCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHH-HHT-CCCCCCGGGSEEEEEC
T ss_pred cCcccCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcc-ccc-CCCccCCCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999984 511 1356899999999999
Q ss_pred cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccccc
Q 019328 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (342)
Q Consensus 173 ~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~ 252 (342)
+|.||+.+|+++ ++|||+|++|||+..+.. ... ....++++++++||+|++|+|++++|++
T Consensus 153 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~----------------~~~--~~~~~l~ell~~aDvV~~~~P~~~~t~~ 213 (333)
T 1dxy_A 153 TGHIGQVAIKLF-KGFGAKVIAYDPYPMKGD----------------HPD--FDYVSLEDLFKQSDVIDLHVPGIEQNTH 213 (333)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCSSC----------------CTT--CEECCHHHHHHHCSEEEECCCCCGGGTT
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCcchhh----------------Hhc--cccCCHHHHHhcCCEEEEcCCCchhHHH
Confidence 999999999997 799999999999865310 001 1235899999999999999999999999
Q ss_pred ccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCC-----------CC---CCccCCCceEEc
Q 019328 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-----------MK---PGLSEMKNAIVV 318 (342)
Q Consensus 253 li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~-----------~~---~~L~~~~nvi~T 318 (342)
+|+++.|+.||+|++|||+|||+++|+++|++||++|+|+||+||||++||+ ++ +|||++|||++|
T Consensus 214 li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~T 293 (333)
T 1dxy_A 214 IINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLS 293 (333)
T ss_dssp SBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEEC
T ss_pred HhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEEC
Confidence 9999999999999999999999999999999999999999999999999993 22 379999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhc
Q 019328 319 PHIASASKWTREGMATLAALNVL 341 (342)
Q Consensus 319 PHia~~t~~~~~~~~~~~~~ni~ 341 (342)
||+||+|.++++++...+++|+.
T Consensus 294 PHia~~t~e~~~~~~~~~~~nl~ 316 (333)
T 1dxy_A 294 PHIAYYTETAVHNMVYFSLQHLV 316 (333)
T ss_dssp SSCTTCSHHHHHHHHHHHHHHHH
T ss_pred CccccChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999984
No 20
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=9.7e-65 Score=485.11 Aligned_cols=301 Identities=21% Similarity=0.305 Sum_probs=257.5
Q ss_pred eEEEEeCCCC-chHHHHHHHh-CCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEc
Q 019328 16 YRVVSTKPMP-GTRWINLLIE-QDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (342)
Q Consensus 16 ~kvl~~~~~~-~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~ 93 (342)
|||+++...+ ...+.+.+.+ .++++.... ...+++++.+.+. ++|+++++...++++++++++|+.++|+|++.
T Consensus 1 mki~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~ 76 (331)
T 1xdw_A 1 MKVLCYGVRDVELPIFEACNKEFGYDIKCVP---DYLNTKETAEMAA-GFDAVILRGNCFANKQNLDIYKKLGVKYILTR 76 (331)
T ss_dssp CEEEECSCCTTTHHHHHHHGGGTCCEEEECS---CCSCSHHHHHTTT-TCSEEEECTTCCBCHHHHHHHHHHTCCEEEES
T ss_pred CEEEEEecCccCHHHHHHHHHhcCeEEEECC---CCCCHHHHHHHhc-CCeEEEEeCCCCCCHHHHhhCcccCceEEEEc
Confidence 4787754222 2345666644 455554422 1234567777776 59999998777899999999998445999999
Q ss_pred ccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEcc
Q 019328 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (342)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~ 173 (342)
|+|+||||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|. |.. ...|+++.|+||||||+
T Consensus 77 ~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~~vgIiG~ 154 (331)
T 1xdw_A 77 TAGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFK-VDA-FMFSKEVRNCTVGVVGL 154 (331)
T ss_dssp SSCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC-CCS-TTCCCCGGGSEEEEECC
T ss_pred cccccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCc-ccc-CcCccCCCCCEEEEECc
Confidence 9999999999999999999999999999999999999999999999999999999985 622 23578999999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccc
Q 019328 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (342)
Q Consensus 174 G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~l 253 (342)
|.||+.+|+++ ++|||+|++|||+..+.. ... ....++++++++||+|++|+|++++|+++
T Consensus 155 G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~----------------~~~--~~~~~l~ell~~aDvV~~~~p~t~~t~~l 215 (331)
T 1xdw_A 155 GRIGRVAAQIF-HGMGATVIGEDVFEIKGI----------------EDY--CTQVSLDEVLEKSDIITIHAPYIKENGAV 215 (331)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCCSC----------------TTT--CEECCHHHHHHHCSEEEECCCCCTTTCCS
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCccHHH----------------Hhc--cccCCHHHHHhhCCEEEEecCCchHHHHH
Confidence 99999999997 799999999999865310 000 12358999999999999999999999999
Q ss_pred cCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCC--C--------CC----CccCC-CceEEc
Q 019328 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY--M--------KP----GLSEM-KNAIVV 318 (342)
Q Consensus 254 i~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~--~--------~~----~L~~~-~nvi~T 318 (342)
|+++.|+.||+|++|||+|||+++|+++|++||++|+|+||+||||++||+ + ++ |||++ |||++|
T Consensus 216 i~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvilT 295 (331)
T 1xdw_A 216 VTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLIT 295 (331)
T ss_dssp BCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEEC
T ss_pred hCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEEc
Confidence 999999999999999999999999999999999999999999999999994 1 12 79999 999999
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhc
Q 019328 319 PHIASASKWTREGMATLAALNVL 341 (342)
Q Consensus 319 PHia~~t~~~~~~~~~~~~~ni~ 341 (342)
||+||+|.++++++...+++|+.
T Consensus 296 PHia~~t~~~~~~~~~~~~~nl~ 318 (331)
T 1xdw_A 296 PHLGSYTDEAVKNMVEVSYQNLK 318 (331)
T ss_dssp CSCTTCSHHHHHHHHHHHHHHHH
T ss_pred CccccChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999984
No 21
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=4e-64 Score=477.40 Aligned_cols=297 Identities=27% Similarity=0.451 Sum_probs=264.3
Q ss_pred CeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEcc
Q 019328 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (342)
Q Consensus 15 ~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g 94 (342)
+|||+++.++++ .+.+.|++.++++.. . ...+.+++.+.+. ++|+++++...++++++++++|+| |+|++.|
T Consensus 5 ~mkil~~~~~~~-~~~~~l~~~~~~v~~-~---~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~~ 76 (313)
T 2ekl_A 5 TVKALITDPIDE-ILIKTLREKGIQVDY-M---PEISKEELLNIIG-NYDIIVVRSRTKVTKDVIEKGKKL--KIIARAG 76 (313)
T ss_dssp CCEEEECSCCCH-HHHHHHHHTTCEEEE-C---TTCCHHHHHHHGG-GCSEEEECSSSCBCHHHHHHCTTC--CEEEECS
T ss_pred ceEEEEECCCCH-HHHHHHHhCCcEEEe-C---CCCCHHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--eEEEEcC
Confidence 468999888765 356778777776642 1 2356788888887 599999876678999999999987 9999999
Q ss_pred cccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccC
Q 019328 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (342)
Q Consensus 95 ~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G 174 (342)
+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|.. ..+.++.|+||||||+|
T Consensus 77 ~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~-----~~~~~l~g~~vgIIG~G 151 (313)
T 2ekl_A 77 IGLDNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKK-----IEGLELAGKTIGIVGFG 151 (313)
T ss_dssp SCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCC-----CCCCCCTTCEEEEESCS
T ss_pred CCCCccCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCC-----CCCCCCCCCEEEEEeeC
Confidence 9999999999999999999999999999999999999999999999999999998751 34689999999999999
Q ss_pred hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccccccc
Q 019328 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (342)
Q Consensus 175 ~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li 254 (342)
.||+.+|+++ ++|||+|++|||++++... ... +.. ..++++++++||+|++|+|++++|++++
T Consensus 152 ~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~---~~~------------g~~-~~~l~ell~~aDvVvl~~P~~~~t~~li 214 (313)
T 2ekl_A 152 RIGTKVGIIA-NAMGMKVLAYDILDIREKA---EKI------------NAK-AVSLEELLKNSDVISLHVTVSKDAKPII 214 (313)
T ss_dssp HHHHHHHHHH-HHTTCEEEEECSSCCHHHH---HHT------------TCE-ECCHHHHHHHCSEEEECCCCCTTSCCSB
T ss_pred HHHHHHHHHH-HHCCCEEEEECCCcchhHH---Hhc------------Cce-ecCHHHHHhhCCEEEEeccCChHHHHhh
Confidence 9999999997 7999999999998765311 111 111 2489999999999999999999999999
Q ss_pred CHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCC---CccCCCceEEcCCCCCCcHHHHHH
Q 019328 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKP---GLSEMKNAIVVPHIASASKWTREG 331 (342)
Q Consensus 255 ~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~---~L~~~~nvi~TPHia~~t~~~~~~ 331 (342)
+++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||++++ |||++|||++|||+|++|.+++++
T Consensus 215 ~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH~~~~t~~~~~~ 294 (313)
T 2ekl_A 215 DYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVIVTTHIGAQTKEAQKR 294 (313)
T ss_dssp CHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCSCTTCSHHHHHH
T ss_pred CHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEEECCccCcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999998887 999999999999999999999999
Q ss_pred HHHHHHhhhc
Q 019328 332 MATLAALNVL 341 (342)
Q Consensus 332 ~~~~~~~ni~ 341 (342)
+...+++|+.
T Consensus 295 ~~~~~~~n~~ 304 (313)
T 2ekl_A 295 VAEMTTQNLL 304 (313)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 22
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=1.3e-64 Score=492.46 Aligned_cols=292 Identities=21% Similarity=0.212 Sum_probs=252.5
Q ss_pred HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecC--CcCccHHHHHHhhccCCceEEEcccccCccChhHHH
Q 019328 29 WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (342)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~--~~~~~~~~~~~~~~l~~k~i~~~g~G~d~id~~~a~ 106 (342)
+.+.|++.++++.+.... ..+++++.+.+. ++|++++.. ..++++++++++|+| |+|++.|+|+||||+++|+
T Consensus 59 ~~~~l~~~g~~v~~~~~~--~~~~~~l~~~l~-~ad~li~~~~~~~~i~~~~l~~~p~L--k~I~~~g~G~d~iD~~aa~ 133 (393)
T 2nac_A 59 LRKYLESNGHTLVVTSDK--DGPDSVFERELV-DADVVISQPFWPAYLTPERIAKAKNL--KLALTAGIGSDHVDLQSAI 133 (393)
T ss_dssp CHHHHHHTTCEEEEESCC--SSTTSHHHHHHT-TCSEEEEBTTBCCCBCHHHHHHCTTC--CEEEESSSCCTTBCHHHHH
T ss_pred HHHHHHhCCCEEEEecCC--CCCHHHHHHhcc-CCCEEEEcCccCCCCCHHHHhhCCCC--cEEEEcCccccccCHHHHh
Confidence 345777778777653221 224457877787 599998863 357899999999987 9999999999999999999
Q ss_pred hCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccChHHHHHHHHHHh
Q 019328 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (342)
Q Consensus 107 ~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~IG~~vA~~l~~ 186 (342)
++||.|+|+|++++.+||||++++||++.|++..+++.+++|.|... .....+.+|+|+||||||+|.||+.+|+++ +
T Consensus 134 ~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~-~~~~~~~~l~gktvGIIGlG~IG~~vA~~l-~ 211 (393)
T 2nac_A 134 DRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIA-DCVSHAYDLEAMHVGTVAAGRIGLAVLRRL-A 211 (393)
T ss_dssp HTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHH-HHHTTCCCCTTCEEEEECCSHHHHHHHHHH-G
T ss_pred cCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCcc-ccccCCccCCCCEEEEEeECHHHHHHHHHH-H
Confidence 99999999999999999999999999999999999999999988421 111236799999999999999999999997 7
Q ss_pred cCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCc
Q 019328 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEA 266 (342)
Q Consensus 187 a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~ga 266 (342)
+|||+|++||++..+.... ... +.....++++++++||+|++|+|++++|+++|+++.|+.||+|+
T Consensus 212 a~G~~V~~~d~~~~~~~~~--~~~------------G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~ga 277 (393)
T 2nac_A 212 PFDVHLHYTDRHRLPESVE--KEL------------NLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGA 277 (393)
T ss_dssp GGTCEEEEECSSCCCHHHH--HHH------------TCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTE
T ss_pred hCCCEEEEEcCCccchhhH--hhc------------CceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCC
Confidence 9999999999986432111 011 11223589999999999999999999999999999999999999
Q ss_pred EEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCC-CCCccCCCceEEcCCCCCCcHHHHHHHHHHHHhhhc
Q 019328 267 ILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASKWTREGMATLAALNVL 341 (342)
Q Consensus 267 ilIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvi~TPHia~~t~~~~~~~~~~~~~ni~ 341 (342)
+|||+|||+++|+++|+++|++|+|+||+||||++||++ ++|||++|||++|||+|+.|.++++++...+++||.
T Consensus 278 ilIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~~~~~~~~~~~nl~ 353 (393)
T 2nac_A 278 YIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILE 353 (393)
T ss_dssp EEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHHHHHHHHHHHHHHH
T ss_pred EEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999975 589999999999999999999999999999999984
No 23
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=1.6e-64 Score=489.07 Aligned_cols=306 Identities=22% Similarity=0.231 Sum_probs=260.4
Q ss_pred CCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecC--CcCccHHHHHHhhccCCceEE
Q 019328 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRAGGKAFS 91 (342)
Q Consensus 14 ~~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~--~~~~~~~~~~~~~~l~~k~i~ 91 (342)
++++||+.+.... .+.+.|++.++++.+.... ..+.+++.+.+. ++|++++.. ..++++++++++|+| |+|+
T Consensus 16 ~~~~vl~~d~~~~-~~~~~l~~~~~~v~~~~~~--~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~~~l~~~~~L--k~I~ 89 (364)
T 2j6i_A 16 DEEKLYGCTENKL-GIANWLKDQGHELITTSDK--EGGNSVLDQHIP-DADIIITTPFHPAYITKERIDKAKKL--KLVV 89 (364)
T ss_dssp HCTTCTTBTTTGG-GCHHHHHHTTCEEEEESCC--SSTTSHHHHHGG-GCSEEEECTTSCCCBCHHHHHHCTTC--CEEE
T ss_pred cCceEEEecCccH-HHHHHHHhCCCEEEEcCCC--CCCHHHHHHHhh-CCeEEEecCcCCCCCCHHHHhhCCCC--eEEE
Confidence 3566666665443 3456777778887654322 224567887777 599998754 246899999999987 9999
Q ss_pred EcccccCccChhHHHhC--CceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEE
Q 019328 92 NMAVGYNNVDVNAANKY--GIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVG 169 (342)
Q Consensus 92 ~~g~G~d~id~~~a~~~--gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvG 169 (342)
+.|+|+||||+++|+++ ||.|+|+||+++.+||||++++||++.|++..+++.+++|.|. +......+++|+|+|||
T Consensus 90 ~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~-~~~~~~~~~~l~g~tvg 168 (364)
T 2j6i_A 90 VAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWE-VAAIAKDAYDIEGKTIA 168 (364)
T ss_dssp ESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCC-HHHHHTTCCCSTTCEEE
T ss_pred ECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCC-cCcccCCcccCCCCEEE
Confidence 99999999999999999 9999999999999999999999999999999999999999885 21111246799999999
Q ss_pred EEccChHHHHHHHHHHhcCCcE-EEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCc
Q 019328 170 VIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK 248 (342)
Q Consensus 170 IiG~G~IG~~vA~~l~~a~g~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~ 248 (342)
|||+|+||+.+|+++ ++|||+ |++||++..+.... .. .+.....++++++++||+|++|+|+++
T Consensus 169 IIG~G~IG~~vA~~l-~~~G~~~V~~~d~~~~~~~~~--~~------------~g~~~~~~l~ell~~aDvV~l~~P~t~ 233 (364)
T 2j6i_A 169 TIGAGRIGYRVLERL-VPFNPKELLYYDYQALPKDAE--EK------------VGARRVENIEELVAQADIVTVNAPLHA 233 (364)
T ss_dssp EECCSHHHHHHHHHH-GGGCCSEEEEECSSCCCHHHH--HH------------TTEEECSSHHHHHHTCSEEEECCCCST
T ss_pred EECcCHHHHHHHHHH-HhCCCcEEEEECCCccchhHH--Hh------------cCcEecCCHHHHHhcCCEEEECCCCCh
Confidence 999999999999997 799997 99999886432111 11 112233589999999999999999999
Q ss_pred ccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCC-CCCccCC--C---ceEEcCCCC
Q 019328 249 TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEM--K---NAIVVPHIA 322 (342)
Q Consensus 249 ~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~--~---nvi~TPHia 322 (342)
+|+++|+++.|+.||+|++|||+|||+++|+++|++||++|+|+||+||||++||++ ++|||.+ | ||++|||+|
T Consensus 234 ~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia 313 (364)
T 2j6i_A 234 GTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYS 313 (364)
T ss_dssp TTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCG
T ss_pred HHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccC
Confidence 999999999999999999999999999999999999999999999999999999976 4799999 9 999999999
Q ss_pred CCcHHHHHHHHHHHHhhhc
Q 019328 323 SASKWTREGMATLAALNVL 341 (342)
Q Consensus 323 ~~t~~~~~~~~~~~~~ni~ 341 (342)
++|.++++++...+++|+.
T Consensus 314 ~~t~e~~~~~~~~~~~nl~ 332 (364)
T 2j6i_A 314 GTTLDAQTRYAQGTVNILE 332 (364)
T ss_dssp GGSHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999984
No 24
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=1.7e-63 Score=472.77 Aligned_cols=288 Identities=19% Similarity=0.220 Sum_probs=243.8
Q ss_pred CCeEEEEeCCCC-chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEE
Q 019328 14 GKYRVVSTKPMP-GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (342)
Q Consensus 14 ~~~kvl~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~ 92 (342)
+.|||++..+.+ ...|.+.+++..+++++....+ ++ .. ++|+++++. .+++++++ |+| |+|++
T Consensus 2 ~~mkil~~~~~~~~~~~~~~l~~~~p~~~~~~~~~-----~~----~~-~ad~~i~~~---~~~~~l~~-~~L--k~I~~ 65 (315)
T 3pp8_A 2 NAMEIIFYHPTFNAAWWVNALEKALPHARVREWKV-----GD----NN-PADYALVWQ---PPVEMLAG-RRL--KAVFV 65 (315)
T ss_dssp CCEEEEEECSSSCHHHHHHHHHHHSTTEEEEECCT-----TC----CS-CCSEEEESS---CCHHHHTT-CCC--SEEEE
T ss_pred CceEEEEEcCCCchHHHHHHHHHHCCCCEEEecCC-----CC----cc-CcEEEEECC---CCHHHhCC-CCc--eEEEE
Confidence 458898877654 3467888877655555432221 11 22 599999874 46899998 887 99999
Q ss_pred cccccCcc-C-hhH---HHhCCceEEcCCCCC-chhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCC
Q 019328 93 MAVGYNNV-D-VNA---ANKYGIAVGNTPGVL-TETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQ 166 (342)
Q Consensus 93 ~g~G~d~i-d-~~~---a~~~gI~v~n~p~~~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gk 166 (342)
.|+|+|+| | +++ +.++||+|+|+|+++ +.+||||++++||++.|++..+++.+++|.|..+ .+++++||
T Consensus 66 ~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~-----~~~~l~g~ 140 (315)
T 3pp8_A 66 LGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPL-----PEYTREEF 140 (315)
T ss_dssp SSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-----CCCCSTTC
T ss_pred CCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCC-----CCCCcCCC
Confidence 99999999 7 887 788999999999874 7999999999999999999999999999988643 35799999
Q ss_pred EEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCC
Q 019328 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL 246 (342)
Q Consensus 167 tvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lpl 246 (342)
||||||+|.||+.+|+++ ++|||+|++|||+++... .. .......++++++++||+|++|+|+
T Consensus 141 tvGIiG~G~IG~~vA~~l-~~~G~~V~~~dr~~~~~~--------------~~--~~~~~~~~l~ell~~aDiV~l~~Pl 203 (315)
T 3pp8_A 141 SVGIMGAGVLGAKVAESL-QAWGFPLRCWSRSRKSWP--------------GV--ESYVGREELRAFLNQTRVLINLLPN 203 (315)
T ss_dssp CEEEECCSHHHHHHHHHH-HTTTCCEEEEESSCCCCT--------------TC--EEEESHHHHHHHHHTCSEEEECCCC
T ss_pred EEEEEeeCHHHHHHHHHH-HHCCCEEEEEcCCchhhh--------------hh--hhhcccCCHHHHHhhCCEEEEecCC
Confidence 999999999999999997 799999999999865310 00 0011125899999999999999999
Q ss_pred CcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCC-CCccCCCceEEcCCCCCCc
Q 019328 247 DKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIASAS 325 (342)
Q Consensus 247 t~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~-~~L~~~~nvi~TPHia~~t 325 (342)
|++|+++|+++.|+.||+|++|||+|||+++|++||++||++|+|+||+||||++||++. +|||++|||++|||+||+|
T Consensus 204 t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t 283 (315)
T 3pp8_A 204 TAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVT 283 (315)
T ss_dssp CGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCC
T ss_pred chhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999999864 7999999999999999999
Q ss_pred HHHHHHHHHHHHhhhc
Q 019328 326 KWTREGMATLAALNVL 341 (342)
Q Consensus 326 ~~~~~~~~~~~~~ni~ 341 (342)
.+ +++...+++||.
T Consensus 284 ~~--~~~~~~~~~ni~ 297 (315)
T 3pp8_A 284 RP--AEAIDYISRTIT 297 (315)
T ss_dssp CH--HHHHHHHHHHHH
T ss_pred HH--HHHHHHHHHHHH
Confidence 86 479999999974
No 25
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=1.6e-62 Score=469.64 Aligned_cols=299 Identities=29% Similarity=0.435 Sum_probs=260.9
Q ss_pred CCCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHH-HHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEE
Q 019328 13 NGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVED-IIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (342)
Q Consensus 13 ~~~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~ 91 (342)
|++++|+++.++++ .+.+.|++. +++..... ..+.++ +.+.+. ++|+++++..+++++++++++|+| |+|+
T Consensus 21 m~~~~vl~~~~~~~-~~~~~l~~~-~~~~~~~~---~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~p~L--k~I~ 92 (333)
T 3ba1_A 21 MEAIGVLMMCPMST-YLEQELDKR-FKLFRYWT---QPAQRDFLALQAE-SIRAVVGNSNAGADAELIDALPKL--EIVS 92 (333)
T ss_dssp -CCCEEEECSCCCH-HHHHHHHHH-SEEEEGGG---CSSHHHHHHHHTT-TEEEEEECSSSCBCHHHHHHCTTC--CEEE
T ss_pred CCCCEEEEeCCCCH-HHHHHHHhc-CCEEEecC---CCChHHHHHHHhC-CCEEEEEcCCCCCCHHHHhhCCCC--cEEE
Confidence 34578999988775 356667653 45543221 123455 555555 599999877778999999999997 9999
Q ss_pred EcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEE
Q 019328 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (342)
Q Consensus 92 ~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIi 171 (342)
+.|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|. +. ....|++++|+|||||
T Consensus 93 ~~~~G~d~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~-~~~~~~~l~g~~vgII 170 (333)
T 3ba1_A 93 SFSVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWK-FG-DFKLTTKFSGKRVGII 170 (333)
T ss_dssp ESSSCCTTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGG-GC-CCCCCCCCTTCCEEEE
T ss_pred EcCccccccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCC-cc-ccccccccCCCEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999985 22 1234789999999999
Q ss_pred ccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccc
Q 019328 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (342)
Q Consensus 172 G~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~ 251 (342)
|+|.||+.+|+++ ++|||+|++|||++... . +.....++++++++||+|++|+|++++|+
T Consensus 171 G~G~iG~~vA~~l-~~~G~~V~~~dr~~~~~-----------------~--g~~~~~~l~ell~~aDvVil~vP~~~~t~ 230 (333)
T 3ba1_A 171 GLGRIGLAVAERA-EAFDCPISYFSRSKKPN-----------------T--NYTYYGSVVELASNSDILVVACPLTPETT 230 (333)
T ss_dssp CCSHHHHHHHHHH-HTTTCCEEEECSSCCTT-----------------C--CSEEESCHHHHHHTCSEEEECSCCCGGGT
T ss_pred CCCHHHHHHHHHH-HHCCCEEEEECCCchhc-----------------c--CceecCCHHHHHhcCCEEEEecCCChHHH
Confidence 9999999999997 79999999999986531 0 11234689999999999999999999999
Q ss_pred cccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCceEEcCCCCCCcHHHHHH
Q 019328 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREG 331 (342)
Q Consensus 252 ~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi~TPHia~~t~~~~~~ 331 (342)
++++++.++.||+|++|||+|||.++|+++|+++|++|+++||+||||++||.+.+|||++|||++|||+|+.|.+++++
T Consensus 231 ~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~ 310 (333)
T 3ba1_A 231 HIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETRKV 310 (333)
T ss_dssp TCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCCGGGGGCTTEEECSSCTTCSHHHHHH
T ss_pred HHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCcchhhcCCCEEECCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998778999999999999999999999999
Q ss_pred HHHHHHhhhc
Q 019328 332 MATLAALNVL 341 (342)
Q Consensus 332 ~~~~~~~ni~ 341 (342)
+...+++|+.
T Consensus 311 ~~~~~~~nl~ 320 (333)
T 3ba1_A 311 MADLVVGNLE 320 (333)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 26
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=2.3e-61 Score=461.81 Aligned_cols=309 Identities=33% Similarity=0.471 Sum_probs=268.2
Q ss_pred CCCCeEEEEeCCCCchHHHHHHHhC-CCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHh-hccCCce
Q 019328 12 PNGKYRVVSTKPMPGTRWINLLIEQ-DCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAAL-SRAGGKA 89 (342)
Q Consensus 12 ~~~~~kvl~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~l~~k~ 89 (342)
|++++||+++.++++ .+.+.|++. ++++.... .....+++++.+.+. ++|++++....++++++++++ |+| |+
T Consensus 5 ~~~~~~il~~~~~~~-~~~~~l~~~~~~~v~~~~-~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~l~~~~~~L--k~ 79 (330)
T 2gcg_A 5 PVRLMKVFVTRRIPA-EGRVALARAADCEVEQWD-SDEPIPAKELERGVA-GAHGLLCLLSDHVDKRILDAAGANL--KV 79 (330)
T ss_dssp --CCEEEEESSCCCH-HHHHHHHHCTTEEEEECC-SSSCCCHHHHHHHHT-TCSEEEECTTSCBCHHHHHHHCTTC--CE
T ss_pred CCCCCEEEEECCCCH-HHHHHHHhcCCceEEEec-CCCCCCHHHHHHHhc-CCeEEEECCCCCCCHHHHHhcCCCc--eE
Confidence 566789999887765 456777765 35665432 223457889988887 599999876678999999999 887 99
Q ss_pred EEEcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEE
Q 019328 90 FSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVG 169 (342)
Q Consensus 90 i~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvG 169 (342)
|++.|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..|.+....|+++.|+|||
T Consensus 80 I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vg 159 (330)
T 2gcg_A 80 ISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVG 159 (330)
T ss_dssp EEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEE
T ss_pred EEECCcccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997775444557899999999
Q ss_pred EEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcc
Q 019328 170 VIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT 249 (342)
Q Consensus 170 IiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~ 249 (342)
|||+|.||+.+|+++ +++|++|++||++....... .. .+... .++++++++||+|++|+|.+++
T Consensus 160 IIG~G~iG~~iA~~l-~~~G~~V~~~d~~~~~~~~~--~~------------~g~~~-~~l~e~l~~aDvVi~~vp~~~~ 223 (330)
T 2gcg_A 160 IIGLGRIGQAIARRL-KPFGVQRFLYTGRQPRPEEA--AE------------FQAEF-VSTPELAAQSDFIVVACSLTPA 223 (330)
T ss_dssp EECCSHHHHHHHHHH-GGGTCCEEEEESSSCCHHHH--HT------------TTCEE-CCHHHHHHHCSEEEECCCCCTT
T ss_pred EECcCHHHHHHHHHH-HHCCCEEEEECCCCcchhHH--Hh------------cCcee-CCHHHHHhhCCEEEEeCCCChH
Confidence 999999999999997 79999999999876432110 00 11122 3899999999999999999999
Q ss_pred cccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCC-CCCccCCCceEEcCCCCCCcHHH
Q 019328 250 TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASKWT 328 (342)
Q Consensus 250 t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvi~TPHia~~t~~~ 328 (342)
|+++++++.++.||+|++|||+|||+++|+++|.++|++|++.||++|||++||++ ++|||++|||++|||+|+.|.++
T Consensus 224 t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~~ 303 (330)
T 2gcg_A 224 TEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRT 303 (330)
T ss_dssp TTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHHH
T ss_pred HHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999965 57999999999999999999999
Q ss_pred HHHHHHHHHhhhc
Q 019328 329 REGMATLAALNVL 341 (342)
Q Consensus 329 ~~~~~~~~~~ni~ 341 (342)
++++...+++|+.
T Consensus 304 ~~~~~~~~~~n~~ 316 (330)
T 2gcg_A 304 RNTMSLLAANNLL 316 (330)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999984
No 27
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=1e-61 Score=466.15 Aligned_cols=305 Identities=28% Similarity=0.392 Sum_probs=254.5
Q ss_pred CCCCeEEEEeCCCC-chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceE
Q 019328 12 PNGKYRVVSTKPMP-GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAF 90 (342)
Q Consensus 12 ~~~~~kvl~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i 90 (342)
++.+++|++.+... ..+ .+.++. ..++..+. ..+.+|+.+.+.+++|++++....++++++++++|+| |+|
T Consensus 18 ~~~kp~i~~l~~~~~~~~-~~~l~~-~~~~~~~~----~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L--k~I 89 (347)
T 1mx3_A 18 GSHMPLVALLDGRDCTVE-MPILKD-VATVAFCD----AQSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKAL--RII 89 (347)
T ss_dssp ---CCEEEESSCSCCTTT-HHHHTT-TCEEEECC----CSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTCSSC--CEE
T ss_pred CCCCCEEEEEcCCcchhh-HHHhhc-cceEEecC----CCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhCCCC--CEE
Confidence 45688888765422 222 345554 34555432 2345666555422478887776678999999999987 999
Q ss_pred EEcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCc----ccc-cccCC
Q 019328 91 SNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNL----FVG-NLLKG 165 (342)
Q Consensus 91 ~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~----~~g-~~l~g 165 (342)
++.|+|||+||+++|+++||.|+|+||+++++||||++++||++.|++..+++.+++|.|.. .... ..| .+++|
T Consensus 90 ~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~-~~~~~~~~~~~~~~l~g 168 (347)
T 1mx3_A 90 VRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQ-SVEQIREVASGAARIRG 168 (347)
T ss_dssp EESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCC-SHHHHHHHTTTCCCCTT
T ss_pred EEcccccCcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCccc-ccccccccccCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999842 1100 112 68999
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
+||||||+|+||+.+|+++ ++|||+|++|||+..+.... .+ +.....++++++++||+|++|+|
T Consensus 169 ~tvGIIG~G~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~---~~------------g~~~~~~l~ell~~aDvV~l~~P 232 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRA-KAFGFNVLFYDPYLSDGVER---AL------------GLQRVSTLQDLLFHSDCVTLHCG 232 (347)
T ss_dssp CEEEEECCSHHHHHHHHHH-HTTTCEEEEECTTSCTTHHH---HH------------TCEECSSHHHHHHHCSEEEECCC
T ss_pred CEEEEEeECHHHHHHHHHH-HHCCCEEEEECCCcchhhHh---hc------------CCeecCCHHHHHhcCCEEEEcCC
Confidence 9999999999999999997 79999999999986532111 11 11233589999999999999999
Q ss_pred CCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCC--CCCccCCCceEEcCCCCC
Q 019328 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM--KPGLSEMKNAIVVPHIAS 323 (342)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~--~~~L~~~~nvi~TPHia~ 323 (342)
++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||++|||+.||++ ++|||.+|||++|||+|+
T Consensus 233 ~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~ 312 (347)
T 1mx3_A 233 LNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAW 312 (347)
T ss_dssp CCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTT
T ss_pred CCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHH
Confidence 999999999999999999999999999999999999999999999999999999999975 479999999999999999
Q ss_pred CcHHHHHHHHHHHHhhhc
Q 019328 324 ASKWTREGMATLAALNVL 341 (342)
Q Consensus 324 ~t~~~~~~~~~~~~~ni~ 341 (342)
+|.+++++|...+++|+.
T Consensus 313 ~t~~~~~~~~~~~~~ni~ 330 (347)
T 1mx3_A 313 YSEQASIEMREEAAREIR 330 (347)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999984
No 28
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=1.1e-60 Score=457.82 Aligned_cols=304 Identities=40% Similarity=0.660 Sum_probs=265.7
Q ss_pred CeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEcc
Q 019328 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (342)
Q Consensus 15 ~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g 94 (342)
|+||+++.++++ .+.+.|++. +++++.. .....+++++.+.+. ++|+++++...++++++++++|+| |+|++.|
T Consensus 2 ~~~il~~~~~~~-~~~~~l~~~-~~~~~~~-~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~l~~~~~L--k~I~~~~ 75 (334)
T 2dbq_A 2 KPKVFITREIPE-VGIKMLEDE-FEVEVWG-DEKEIPREILLKKVK-EVDALVTMLSERIDKEVFENAPKL--RIVANYA 75 (334)
T ss_dssp CCEEEESSCCCH-HHHHHHHTT-SEEEECC-CSSCCCHHHHHHHTT-SCSEEEECTTSCBCHHHHHTCTTC--CEEEESS
T ss_pred CcEEEEecCCCH-HHHHHHHhc-CCEEEec-CCCCCCHHHHHHHhc-CcEEEEEcCCCCCCHHHHhhCCCc--eEEEECC
Confidence 468998887765 456677653 5665432 222357888888887 599999887778999999999987 9999999
Q ss_pred cccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCC----CCCCCcccccccCCCEEEE
Q 019328 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGV 170 (342)
Q Consensus 95 ~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~----~w~~~~~~g~~l~gktvGI 170 (342)
+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|. .|.+....|+++.|+||||
T Consensus 76 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgI 155 (334)
T 2dbq_A 76 VGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGI 155 (334)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEE
T ss_pred cccccccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999999996 5654334578999999999
Q ss_pred EccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccc
Q 019328 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (342)
Q Consensus 171 iG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t 250 (342)
||+|.||+.+|+++ ++||++|++|||+...... ..+ + . ...++++++++||+|++|+|++++|
T Consensus 156 IG~G~iG~~iA~~l-~~~G~~V~~~d~~~~~~~~---~~~-------g-----~-~~~~l~~~l~~aDvVil~vp~~~~t 218 (334)
T 2dbq_A 156 IGLGRIGQAIAKRA-KGFNMRILYYSRTRKEEVE---REL-------N-----A-EFKPLEDLLRESDFVVLAVPLTRET 218 (334)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCHHHH---HHH-------C-----C-EECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EccCHHHHHHHHHH-HhCCCEEEEECCCcchhhH---hhc-------C-----c-ccCCHHHHHhhCCEEEECCCCChHH
Confidence 99999999999997 6999999999998764211 111 1 1 1258999999999999999999999
Q ss_pred ccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCceEEcCCCCCCcHHHHH
Q 019328 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTRE 330 (342)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi~TPHia~~t~~~~~ 330 (342)
+++++++.++.||+|++|||+|||.++|+++|+++|++|+++||++|||++||..++|||++|||++|||+|+.|.++.+
T Consensus 219 ~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~~~~ 298 (334)
T 2dbq_A 219 YHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGARE 298 (334)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHHHHH
T ss_pred HHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999556799999999999999999999999
Q ss_pred HHHHHHHhhhc
Q 019328 331 GMATLAALNVL 341 (342)
Q Consensus 331 ~~~~~~~~ni~ 341 (342)
++...+++|+.
T Consensus 299 ~~~~~~~~n~~ 309 (334)
T 2dbq_A 299 GMAELVAKNLI 309 (334)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999984
No 29
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=8.1e-61 Score=458.33 Aligned_cols=299 Identities=31% Similarity=0.484 Sum_probs=262.6
Q ss_pred CeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEcc
Q 019328 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (342)
Q Consensus 15 ~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g 94 (342)
++||+++.++++. ..+.|++. +++++.. ..+.+++.+.+. ++|+++++...++++++++++|+| |+|++.|
T Consensus 2 ~~~il~~~~~~~~-~~~~l~~~-~~~~~~~----~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~~ 72 (333)
T 2d0i_A 2 RPKVGVLLKMKRE-ALEELKKY-ADVEIIL----YPSGEELKGVIG-RFDGIIVSPTTKITREVLENAERL--KVISCHS 72 (333)
T ss_dssp CSEEEECSCCCHH-HHHHHHTT-SEEEECC----SCCHHHHHHHGG-GCSEEEECTTSCBCHHHHTTCTTC--CEEEESS
T ss_pred CcEEEEECCCCHH-HHHHHHhc-CCEEEeC----CCCHHHHHHHhc-CCEEEEECCCCCCCHHHHhhCCCc--eEEEECC
Confidence 4689998887753 46677654 5665432 257888888887 599999877778999999999987 9999999
Q ss_pred cccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccc----cccCCCEEEE
Q 019328 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVG----NLLKGQTVGV 170 (342)
Q Consensus 95 ~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g----~~l~gktvGI 170 (342)
+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..|. ....| ++|.|+||||
T Consensus 73 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~~~~~~~l~g~~vgI 151 (333)
T 2d0i_A 73 AGYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHA-KIWTGFKRIESLYGKKVGI 151 (333)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHH-HHHTTSCCCCCSTTCEEEE
T ss_pred cccccccHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCc-ccccCCcccCCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999999999986442 11245 7999999999
Q ss_pred EccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccc
Q 019328 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (342)
Q Consensus 171 iG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t 250 (342)
||+|.||+.+|+++ ++||++|++||++...... ..+ +.. ..++++++++||+|++|+|++++|
T Consensus 152 IG~G~iG~~vA~~l-~~~G~~V~~~d~~~~~~~~---~~~------------g~~-~~~l~e~l~~aDiVil~vp~~~~t 214 (333)
T 2d0i_A 152 LGMGAIGKAIARRL-IPFGVKLYYWSRHRKVNVE---KEL------------KAR-YMDIDELLEKSDIVILALPLTRDT 214 (333)
T ss_dssp ECCSHHHHHHHHHH-GGGTCEEEEECSSCCHHHH---HHH------------TEE-ECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EccCHHHHHHHHHH-HHCCCEEEEECCCcchhhh---hhc------------Cce-ecCHHHHHhhCCEEEEcCCCChHH
Confidence 99999999999997 7999999999998764211 111 111 248999999999999999999999
Q ss_pred ccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCC-ceEEcCCCCCCcHHHH
Q 019328 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMK-NAIVVPHIASASKWTR 329 (342)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~-nvi~TPHia~~t~~~~ 329 (342)
+++++++.++.||+| +|||+|||.++|+++|+++|++|+++||++|||++||++++|||++| ||++|||+|+.|.++.
T Consensus 215 ~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~~~ 293 (333)
T 2d0i_A 215 YHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQ 293 (333)
T ss_dssp TTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHHHH
T ss_pred HHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHHHH
Confidence 999999999999999 99999999999999999999999999999999999997788999999 9999999999999999
Q ss_pred HHHHHHHHhhhc
Q 019328 330 EGMATLAALNVL 341 (342)
Q Consensus 330 ~~~~~~~~~ni~ 341 (342)
+++...+++|+.
T Consensus 294 ~~~~~~~~~n~~ 305 (333)
T 2d0i_A 294 EDVGFRAVENLL 305 (333)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999984
No 30
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=2.5e-61 Score=466.09 Aligned_cols=273 Identities=27% Similarity=0.375 Sum_probs=237.7
Q ss_pred CCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEc
Q 019328 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (342)
Q Consensus 14 ~~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~ 93 (342)
+||||+++..++. ..+.+++.+ ++++... ...+.++ +. ++|+++++..+++++++++ .++| |+|++.
T Consensus 2 ~mmkIl~~~~~p~--~~~~~~~~~-~v~~~~~--~~~~~~~----l~-~ad~li~~~~~~v~~~ll~-~~~L--k~I~~~ 68 (381)
T 3oet_A 2 NAMKILVDENMPY--ARELFSRLG-EVKAVPG--RPIPVEE----LN-HADALMVRSVTKVNESLLS-GTPI--NFVGTA 68 (381)
T ss_dssp CCCEEEEETTSTT--HHHHHTTSS-EEEEECC-----CHHH----HT-TCSEEEECTTSCBSHHHHT-TSCC--CEEEES
T ss_pred CceEEEECCCCcH--HHHHHhhCC-cEEEeCC--CCCCHHH----HC-CCEEEEECCCCCCCHHHHc-CCCC--EEEEEc
Confidence 4689999988875 345666655 6665432 2344444 34 5999999887889999998 4555 999999
Q ss_pred ccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEcc
Q 019328 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (342)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~ 173 (342)
|+|+||||+++|+++||.|+|+||+|+.+||||++++||++.|+. |.+++||||||||+
T Consensus 69 ~~G~D~iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~---------------------g~~l~gktvGIIGl 127 (381)
T 3oet_A 69 TAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD---------------------GFSLRDRTIGIVGV 127 (381)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT---------------------TCCGGGCEEEEECC
T ss_pred cccccccCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc---------------------CCccCCCEEEEEeE
Confidence 999999999999999999999999999999999999999999863 35899999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcc----
Q 019328 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT---- 249 (342)
Q Consensus 174 G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~---- 249 (342)
|+||+.+|+++ ++|||+|++|||+.... . ......++++++++||+|++|+|+|++
T Consensus 128 G~IG~~vA~~l-~a~G~~V~~~d~~~~~~---------------~----~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~ 187 (381)
T 3oet_A 128 GNVGSRLQTRL-EALGIRTLLCDPPRAAR---------------G----DEGDFRTLDELVQEADVLTFHTPLYKDGPYK 187 (381)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECHHHHHT---------------T----CCSCBCCHHHHHHHCSEEEECCCCCCSSTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCChHHh---------------c----cCcccCCHHHHHhhCCEEEEcCcCCcccccc
Confidence 99999999997 79999999999854321 0 012346999999999999999999999
Q ss_pred cccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCceEEcCCCCCCcHHHH
Q 019328 250 TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTR 329 (342)
Q Consensus 250 t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi~TPHia~~t~~~~ 329 (342)
|+++|+++.|+.||+|++|||+|||+++|++||++||++|+++||+||||++||+++++||.++ +++|||+||+|.|++
T Consensus 188 T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~-~i~TPHiag~t~e~~ 266 (381)
T 3oet_A 188 TLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAV-DIGTSHIAGYTLEGK 266 (381)
T ss_dssp CTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHS-SEECSSCTTCCHHHH
T ss_pred chhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCcchhhhCC-EEECCccCcCcHHHH
Confidence 9999999999999999999999999999999999999999999999999999999888899875 899999999999999
Q ss_pred HHHHHHHHhhhc
Q 019328 330 EGMATLAALNVL 341 (342)
Q Consensus 330 ~~~~~~~~~ni~ 341 (342)
.++..++++|+.
T Consensus 267 ~~~~~~~~~~l~ 278 (381)
T 3oet_A 267 ARGTTQVFEAYS 278 (381)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999984
No 31
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=4.7e-61 Score=462.58 Aligned_cols=306 Identities=26% Similarity=0.363 Sum_probs=258.2
Q ss_pred CCeEEEEeCC-CCc-hHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhc----CCccEEEec------CCcCccHHHHHH
Q 019328 14 GKYRVVSTKP-MPG-TRWINLLIEQDCRVEICTQKKTILSVEDIIALIG----DKCDGVIGQ------LTEDWGETLFAA 81 (342)
Q Consensus 14 ~~~kvl~~~~-~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~~i~~------~~~~~~~~~~~~ 81 (342)
+++|||++.+ ++. ....+.|++. +++.... ..+++++.+.+. +++|+++.. ...+++++++++
T Consensus 2 ~~~~vl~~~~~~~~~~~~~~~l~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~ 76 (348)
T 2w2k_A 2 PRPRVLLLGDPARHLDDLWSDFQQK-FEVIPAN----LTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISH 76 (348)
T ss_dssp CCCEEEECSSCCSSCHHHHHHHHHH-SEEEECC----CCCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTT
T ss_pred CCcEEEEECCccccChHHHHHHHhc-ceEEecC----CCCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHHh
Confidence 4578998887 532 2334566543 5665422 246889988876 148888864 245899999999
Q ss_pred hh-ccCCceEEEcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCC---CCCCC-CC
Q 019328 82 LS-RAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGL---YDGWL-PN 156 (342)
Q Consensus 82 ~~-~l~~k~i~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~---w~~w~-~~ 156 (342)
+| +| |+|++.|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|. |..+. ..
T Consensus 77 ~~~~L--k~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~ 154 (348)
T 2w2k_A 77 LPSSL--KVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEI 154 (348)
T ss_dssp SCTTC--CEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred cccCc--eEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccc
Confidence 98 46 99999999999999999999999999999999999999999999999999999999999998 73110 01
Q ss_pred cccccccCCCEEEEEccChHHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh
Q 019328 157 LFVGNLLKGQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR 235 (342)
Q Consensus 157 ~~~g~~l~gktvGIiG~G~IG~~vA~~l~~-a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~ 235 (342)
...|.+++|+||||||+|.||+.+|+++ + +|||+|++||++....... ... +.....+++++++
T Consensus 155 ~~~~~~l~g~~vgIIG~G~IG~~vA~~l-~~~~G~~V~~~d~~~~~~~~~--~~~------------g~~~~~~l~ell~ 219 (348)
T 2w2k_A 155 GKSAHNPRGHVLGAVGLGAIQKEIARKA-VHGLGMKLVYYDVAPADAETE--KAL------------GAERVDSLEELAR 219 (348)
T ss_dssp HTTCCCSTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEECSSCCCHHHH--HHH------------TCEECSSHHHHHH
T ss_pred cccCcCCCCCEEEEEEECHHHHHHHHHH-HHhcCCEEEEECCCCcchhhH--hhc------------CcEEeCCHHHHhc
Confidence 1246799999999999999999999997 8 9999999999986532111 000 1122348999999
Q ss_pred cCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCce
Q 019328 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNA 315 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nv 315 (342)
+||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|+|.||++|||++||..++|||++|||
T Consensus 220 ~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~nv 299 (348)
T 2w2k_A 220 RSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKHV 299 (348)
T ss_dssp HCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTTSCCHHHHTSSSE
T ss_pred cCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCCCCCchhhcCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999656789999999
Q ss_pred EEcCCCCCCcHHHHHHHHHHHHhhhc
Q 019328 316 IVVPHIASASKWTREGMATLAALNVL 341 (342)
Q Consensus 316 i~TPHia~~t~~~~~~~~~~~~~ni~ 341 (342)
++|||+|+.|.++++++...+++||.
T Consensus 300 iltPH~~~~t~e~~~~~~~~~~~ni~ 325 (348)
T 2w2k_A 300 TLTTHIGGVAIETFHEFERLTMTNID 325 (348)
T ss_dssp EECCSCTTCSHHHHHHHHHHHHHHHH
T ss_pred EEcCcCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999984
No 32
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.4e-60 Score=450.87 Aligned_cols=279 Identities=23% Similarity=0.338 Sum_probs=243.8
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEccc
Q 019328 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (342)
Q Consensus 16 ~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~ 95 (342)
|||+++.++++ .+.+.|++.++++. . +.+. ++|+++++. .+.++++++|+| |+|++.|+
T Consensus 1 m~il~~~~~~~-~~~~~l~~~~~~v~---~-----------~~~~-~~d~~i~~~---~~~~~l~~~~~L--k~I~~~~~ 59 (303)
T 1qp8_A 1 MELYVNFELPP-EAEEELRKYFKIVR---G-----------GDLG-NVEAALVSR---ITAEELAKMPRL--KFIQVVTA 59 (303)
T ss_dssp CEEECCSCCCH-HHHHHHHTTCEEEC---S-----------SCCT-TBCCCCBSC---CCHHHHHHCTTC--CCEEBSSS
T ss_pred CEEEEccCCCH-HHHHHHHhcCCccc---h-----------hhhC-CCEEEEECC---CCHHHHhhCCCC--cEEEECCc
Confidence 47888888765 45677776554431 1 1233 589888764 346899999987 99999999
Q ss_pred ccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccCh
Q 019328 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (342)
Q Consensus 96 G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~ 175 (342)
|+|+||++++ ++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..+. .++++.|+||||||+|.
T Consensus 60 G~d~id~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~----~~~~l~g~~vgIIG~G~ 134 (303)
T 1qp8_A 60 GLDHLPWESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDV----EIPLIQGEKVAVLGLGE 134 (303)
T ss_dssp CCTTSCCTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCS----CCCCCTTCEEEEESCST
T ss_pred CcccccHHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCC----CCCCCCCCEEEEEccCH
Confidence 9999999985 799999999999999999999999999999999999999999985321 23589999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccC
Q 019328 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLIN 255 (342)
Q Consensus 176 IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~ 255 (342)
||+.+|+++ ++|||+|++|||++.. . +.....++++++++||+|++|+|++++|+++|+
T Consensus 135 IG~~~A~~l-~~~G~~V~~~dr~~~~----------------~----~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~ 193 (303)
T 1qp8_A 135 IGTRVGKIL-AALGAQVRGFSRTPKE----------------G----PWRFTNSLEEALREARAAVCALPLNKHTRGLVK 193 (303)
T ss_dssp HHHHHHHHH-HHTTCEEEEECSSCCC----------------S----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBC
T ss_pred HHHHHHHHH-HHCCCEEEEECCCccc----------------c----CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhC
Confidence 999999997 7999999999997641 0 112246899999999999999999999999999
Q ss_pred HhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecC-CCCCCC-CCCccCCCceEEcCCCCCC--cHHHHHH
Q 019328 256 KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVF-EDEPYM-KPGLSEMKNAIVVPHIASA--SKWTREG 331 (342)
Q Consensus 256 ~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~-~~EP~~-~~~L~~~~nvi~TPHia~~--t~~~~~~ 331 (342)
++.|+.||+|++|||+|||+++|+++|+++|++|+|+||++||| ++||++ ++|||++|||++|||+||. |.+++++
T Consensus 194 ~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t~e~~~~ 273 (303)
T 1qp8_A 194 YQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNERVWRQ 273 (303)
T ss_dssp HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSCHHHHHH
T ss_pred HHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999 889986 5799999999999999998 9999999
Q ss_pred HHHHHHhhhc
Q 019328 332 MATLAALNVL 341 (342)
Q Consensus 332 ~~~~~~~ni~ 341 (342)
|...+++|+.
T Consensus 274 ~~~~~~~nl~ 283 (303)
T 1qp8_A 274 MVMEAVRNLI 283 (303)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 33
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=1.3e-58 Score=468.09 Aligned_cols=299 Identities=30% Similarity=0.413 Sum_probs=264.1
Q ss_pred CCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEc
Q 019328 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (342)
Q Consensus 14 ~~~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~ 93 (342)
++|||++++++++. ..+.|++. +++++.. ..+++++.+.+. ++|++++++.+++++++++++|+| |+|++.
T Consensus 3 ~~~~vl~~~~~~~~-~~~~l~~~-~~v~~~~----~~~~~~~~~~~~-~~d~li~~~~~~~~~~~l~~~~~L--k~i~~~ 73 (529)
T 1ygy_A 3 SLPVVLIADKLAPS-TVAALGDQ-VEVRWVD----GPDRDKLLAAVP-EADALLVRSATTVDAEVLAAAPKL--KIVARA 73 (529)
T ss_dssp CCCEEEECSSCCGG-GGTTSCSS-SEEEECC----TTSHHHHHHHGG-GCSEEEECSSSCBCHHHHHTCTTC--CEEEES
T ss_pred CCcEEEEeCCCCHH-HHHHHhcC-ceEEEcC----CCCHHHHHHHhc-CCEEEEEcCCCCCCHHHHhhCCCC--cEEEEC
Confidence 46789999887753 34556554 6666432 246889988887 599999987788999999999987 999999
Q ss_pred ccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEcc
Q 019328 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (342)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~ 173 (342)
|+|+||||+++|+++||.|+|+|++|+.+||||++++||+++|+++.+++.+++|.|.. ..+.|.+|+|+||||||+
T Consensus 74 ~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~---~~~~~~~l~g~~vgIIG~ 150 (529)
T 1ygy_A 74 GVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKR---SSFSGTEIFGKTVGVVGL 150 (529)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCG---GGCCBCCCTTCEEEEECC
T ss_pred CcCcCccCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcc---cCcCccccCCCEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999998852 234578999999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccc
Q 019328 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (342)
Q Consensus 174 G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~l 253 (342)
|+||+++|+++ ++|||+|++|||+...... ... +... .++++++++||+|++|+|++++|+++
T Consensus 151 G~IG~~vA~~l-~~~G~~V~~~d~~~~~~~a---~~~------------g~~~-~~l~e~~~~aDvV~l~~P~~~~t~~~ 213 (529)
T 1ygy_A 151 GRIGQLVAQRI-AAFGAYVVAYDPYVSPARA---AQL------------GIEL-LSLDDLLARADFISVHLPKTPETAGL 213 (529)
T ss_dssp SHHHHHHHHHH-HTTTCEEEEECTTSCHHHH---HHH------------TCEE-CCHHHHHHHCSEEEECCCCSTTTTTC
T ss_pred CHHHHHHHHHH-HhCCCEEEEECCCCChhHH---Hhc------------CcEE-cCHHHHHhcCCEEEECCCCchHHHHH
Confidence 99999999997 7999999999998743211 111 1122 38999999999999999999999999
Q ss_pred cCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCceEEcCCCCCCcHHHHHHHH
Q 019328 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMA 333 (342)
Q Consensus 254 i~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi~TPHia~~t~~~~~~~~ 333 (342)
++++.++.||+|+++||+|||+++|+++|+++|++|+++||++|||+.||..++|||++||+++|||+++.|.++++++.
T Consensus 214 i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~ 293 (529)
T 1ygy_A 214 IDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAG 293 (529)
T ss_dssp BCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHH
T ss_pred hCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHhhhc
Q 019328 334 TLAALNVL 341 (342)
Q Consensus 334 ~~~~~ni~ 341 (342)
..+++|+.
T Consensus 294 ~~~~~~l~ 301 (529)
T 1ygy_A 294 TDVAESVR 301 (529)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999874
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=3.8e-59 Score=437.74 Aligned_cols=243 Identities=27% Similarity=0.365 Sum_probs=219.2
Q ss_pred CccEEEecCCcCccHHHHHHhhccCCceEEEcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHH
Q 019328 62 KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEA 141 (342)
Q Consensus 62 ~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~ 141 (342)
++|++++.. .++ ++|+| |+|++.|+|+|+||+++|+++||.++| +|.++.+||||++++||++.|++..+
T Consensus 34 ~ad~li~~~-~~~------~~~~L--k~I~~~~~G~d~id~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~ 103 (290)
T 3gvx_A 34 DAEAQVIKD-RYV------LGKRT--KMIQAISAGVDHIDVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILEN 103 (290)
T ss_dssp CCSEEEESS-CCC------CCSSC--CEEEECSSCCTTSCGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred hhhhhhhhh-hhh------hhhhh--HHHHHHhcCCceeecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhh
Confidence 589999843 332 67887 999999999999999999987766555 58899999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCcccccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCC
Q 019328 142 DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP 221 (342)
Q Consensus 142 ~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (342)
++.+++|.|... + .++|+|+||||||+|.||+++|+++ ++|||+|++|||+..+.. .
T Consensus 104 ~~~~~~g~w~~~-~----~~~l~g~tvGIIGlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~--------------~--- 160 (290)
T 3gvx_A 104 NELMKAGIFRQS-P----TTLLYGKALGILGYGGIGRRVAHLA-KAFGMRVIAYTRSSVDQN--------------V--- 160 (290)
T ss_dssp HHHHHTTCCCCC-C----CCCCTTCEEEEECCSHHHHHHHHHH-HHHTCEEEEECSSCCCTT--------------C---
T ss_pred hhHhhhcccccC-C----ceeeecchheeeccCchhHHHHHHH-HhhCcEEEEEeccccccc--------------c---
Confidence 999999998532 1 2689999999999999999999997 799999999999865310 0
Q ss_pred ccccccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCC
Q 019328 222 VTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFED 301 (342)
Q Consensus 222 ~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~ 301 (342)
.....++++++++||+|++|+|+|++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|++.||+||||++
T Consensus 161 --~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~ 238 (290)
T 3gvx_A 161 --DVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWN 238 (290)
T ss_dssp --SEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTT
T ss_pred --ccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccC
Confidence 123459999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCceEEcCCCC-CCcHHHHHHHHHHHHhhhc
Q 019328 302 EPYMKPGLSEMKNAIVVPHIA-SASKWTREGMATLAALNVL 341 (342)
Q Consensus 302 EP~~~~~L~~~~nvi~TPHia-~~t~~~~~~~~~~~~~ni~ 341 (342)
||+ +|||++|||++|||+| ++|.++++++.+.+++||.
T Consensus 239 EP~--~pL~~~~nvilTPHiag~~t~e~~~~~~~~~~~ni~ 277 (290)
T 3gvx_A 239 EPE--ITETNLRNAILSPHVAGGMSGEIMDIAIQLAFENVR 277 (290)
T ss_dssp TTS--CCSCCCSSEEECCSCSSCBTTBCCHHHHHHHHHHHH
T ss_pred Ccc--cchhhhhhhhcCccccCCccchHHHHHHHHHHHHHH
Confidence 998 8999999999999999 9999999999999999984
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=9.3e-58 Score=442.07 Aligned_cols=271 Identities=26% Similarity=0.385 Sum_probs=235.3
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEccc
Q 019328 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (342)
Q Consensus 16 ~kvl~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~ 95 (342)
|||+++..++. ..+.+++.+ +++..... ..+.+++ . ++|+++++..+++++++++ +|+| |+|++.|+
T Consensus 1 mkil~~~~~~~--~~~~~~~~~-~v~~~~~~--~~~~~~l----~-~ad~li~~~~~~~~~~~l~-~~~L--k~I~~~~~ 67 (380)
T 2o4c_A 1 MRILADENIPV--VDAFFADQG-SIRRLPGR--AIDRAAL----A-EVDVLLVRSVTEVSRAALA-GSPV--RFVGTCTI 67 (380)
T ss_dssp CEEEEETTCTT--HHHHHGGGS-EEEEECGG--GCSTTTT----T-TCSEEEECTTSCBCHHHHT-TSCC--CEEEECSS
T ss_pred CEEEEecCchH--HHHHHHhCC-cEEEecCC--cCChHHH----C-CcEEEEEcCCCCCCHHHhc-CCCc--eEEEEcCc
Confidence 47888887765 245666554 55543321 2233332 3 5999999877789999998 8887 99999999
Q ss_pred ccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccCh
Q 019328 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (342)
Q Consensus 96 G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~ 175 (342)
|+||||+++|+++||.|+|+||+|+.+||||++++||++.|++ |.++.|+||||||+|+
T Consensus 68 G~D~iD~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~---------------------~~~l~g~tvGIIGlG~ 126 (380)
T 2o4c_A 68 GTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR---------------------GADLAERTYGVVGAGQ 126 (380)
T ss_dssp CSTTBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH---------------------TCCGGGCEEEEECCSH
T ss_pred ccchhhHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh---------------------hcccCCCEEEEEeCCH
Confidence 9999999999999999999999999999999999999999873 2489999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcc----cc
Q 019328 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT----TY 251 (342)
Q Consensus 176 IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~----t~ 251 (342)
||+.+|+++ ++|||+|++|||+.... . . + ....++++++++||+|++|+|++++ |+
T Consensus 127 IG~~vA~~l-~~~G~~V~~~d~~~~~~--~--------------~--g-~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~ 186 (380)
T 2o4c_A 127 VGGRLVEVL-RGLGWKVLVCDPPRQAR--E--------------P--D-GEFVSLERLLAEADVISLHTPLNRDGEHPTR 186 (380)
T ss_dssp HHHHHHHHH-HHTTCEEEEECHHHHHH--S--------------T--T-SCCCCHHHHHHHCSEEEECCCCCSSSSSCCT
T ss_pred HHHHHHHHH-HHCCCEEEEEcCChhhh--c--------------c--C-cccCCHHHHHHhCCEEEEeccCccccccchh
Confidence 999999997 79999999999865421 0 0 1 1246899999999999999999999 99
Q ss_pred cccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCceEEcCCCCCCcHHHHHH
Q 019328 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREG 331 (342)
Q Consensus 252 ~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi~TPHia~~t~~~~~~ 331 (342)
++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+++++|+. +||++|||+||+|.++..+
T Consensus 187 ~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~-~nvi~TPHiag~t~e~~~~ 265 (380)
T 2o4c_A 187 HLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAA-RCLIATPHIAGYSLEGKLR 265 (380)
T ss_dssp TSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHT-TCSEECSSCTTCCHHHHHH
T ss_pred hhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhcc-CCEEEccccCcCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988888887 5999999999999999999
Q ss_pred HHHHHHhhhc
Q 019328 332 MATLAALNVL 341 (342)
Q Consensus 332 ~~~~~~~ni~ 341 (342)
+..++++|+.
T Consensus 266 ~~~~~~~nl~ 275 (380)
T 2o4c_A 266 GTAQIYQAYC 275 (380)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999974
No 36
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=1.1e-36 Score=302.75 Aligned_cols=213 Identities=15% Similarity=0.192 Sum_probs=176.9
Q ss_pred CceEE-EcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCC
Q 019328 87 GKAFS-NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKG 165 (342)
Q Consensus 87 ~k~i~-~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~g 165 (342)
++.|+ ..++|+|++ ++|+++||.|+|+|++|+ +|||+ ++|++....+.+++| |. . ..|.++.|
T Consensus 214 l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~-------l~r~~~~~~~~l~~g-w~---~--~~g~~L~G 277 (494)
T 3d64_A 214 IKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKS-------KFDNLYGCRESLVDG-IK---R--ATDVMIAG 277 (494)
T ss_dssp CCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------HHHHHHHHHTTHHHH-HH---H--HHCCCCTT
T ss_pred cEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHH-------HHhhhHhhhhhhhhh-hh---h--ccccccCC
Confidence 37887 889999998 789999999999999999 99994 357776666666665 42 1 34678999
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
|||||||+|.||+.+|+++ ++|||+|++|||++....+... .+. ...++++++++||+|++|+
T Consensus 278 ktVgIIG~G~IG~~vA~~l-~~~G~~V~v~d~~~~~~~~a~~--------------~G~-~~~~l~ell~~aDiVi~~~- 340 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSL-RGLGATVWVTEIDPICALQAAM--------------EGY-RVVTMEYAADKADIFVTAT- 340 (494)
T ss_dssp CEEEEECCSHHHHHHHHHH-HTTTCEEEEECSCHHHHHHHHT--------------TTC-EECCHHHHTTTCSEEEECS-
T ss_pred CEEEEEccCHHHHHHHHHH-HHCCCEEEEEeCChHhHHHHHH--------------cCC-EeCCHHHHHhcCCEEEECC-
Confidence 9999999999999999997 7999999999999865322110 011 2358999999999999997
Q ss_pred CCcccccccCHhHHccCCCCcEEEecCCCcc-CCHHHHHHHHHcCCccEEEeecCCCCCCC-CCCccCC--CceEEcCCC
Q 019328 246 LDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEM--KNAIVVPHI 321 (342)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~sRG~~-vd~~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~--~nvi~TPHi 321 (342)
+|+++|+++.|++||+|++|||+|||++ ||+++| +||++|+|+ +++|| ||++ ++|||.+ |||++| |+
T Consensus 341 ---~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nvv~t-H~ 411 (494)
T 3d64_A 341 ---GNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRLVNL-GC 411 (494)
T ss_dssp ---SSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSBHHH-HT
T ss_pred ---CcccccCHHHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCEEEE-eC
Confidence 6899999999999999999999999999 699999 999999987 55555 4654 4789998 999999 99
Q ss_pred C-CCcHH-HHHHHHHHHHhhhc
Q 019328 322 A-SASKW-TREGMATLAALNVL 341 (342)
Q Consensus 322 a-~~t~~-~~~~~~~~~~~ni~ 341 (342)
| +.|.+ +..+++.++++|+.
T Consensus 412 atg~~~~~~~~~~a~~~~~ni~ 433 (494)
T 3d64_A 412 ATGHPSFVMSNSFTNQTLAQIE 433 (494)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHH
Confidence 9 66744 77888999999874
No 37
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=2.3e-36 Score=299.31 Aligned_cols=215 Identities=13% Similarity=0.132 Sum_probs=183.6
Q ss_pred CceEE-EcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCC
Q 019328 87 GKAFS-NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKG 165 (342)
Q Consensus 87 ~k~i~-~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~g 165 (342)
++.|+ ..++|+|++ ++|+++||.++|+|++|+ +|+| +++|++..+.+.+++| |.+ ..+.++.|
T Consensus 194 l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r-----~~~~~l~G 257 (479)
T 1v8b_A 194 IIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR-----ATDFLISG 257 (479)
T ss_dssp CCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH-----HHCCCCTT
T ss_pred eEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh-----ccccccCC
Confidence 48888 889999998 789999999999999999 9999 4578888888888887 632 34678999
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
|||||||+|.||+.+|+++ ++|||+|++||+++........ .++ ...++++++++||+|++|+
T Consensus 258 ktVgIIG~G~IG~~vA~~l-~~~G~~Viv~d~~~~~~~~a~~--------------~g~-~~~~l~ell~~aDiVi~~~- 320 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSM-KGLGARVYITEIDPICAIQAVM--------------EGF-NVVTLDEIVDKGDFFITCT- 320 (479)
T ss_dssp SEEEEECCSHHHHHHHHHH-HHHTCEEEEECSCHHHHHHHHT--------------TTC-EECCHHHHTTTCSEEEECC-
T ss_pred CEEEEEeeCHHHHHHHHHH-HhCcCEEEEEeCChhhHHHHHH--------------cCC-EecCHHHHHhcCCEEEECC-
Confidence 9999999999999999997 7999999999999865322110 111 2358999999999999994
Q ss_pred CCcccccccCHhHHccCCCCcEEEecCCCcc-CCHHHHHH--HHHcCCccEEEeecCCCCCCCCCCccCC--CceEEcCC
Q 019328 246 LDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVE--HLKQNPMFRVGLDVFEDEPYMKPGLSEM--KNAIVVPH 320 (342)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~sRG~~-vd~~aL~~--aL~~g~i~gaalDV~~~EP~~~~~L~~~--~nvi~TPH 320 (342)
+|+++|+++.|+.||+|++|||+|||++ ||+++|.+ ||++|+|+ +++|||+.+ +++|||.+ |||++| |
T Consensus 321 ---~t~~lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~plp--~~~~l~~l~~~nvv~t-H 393 (479)
T 1v8b_A 321 ---GNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRITLP--NGNKIIVLARGRLLNL-G 393 (479)
T ss_dssp ---SSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEECT--TSCEEEEEGGGSBHHH-H
T ss_pred ---ChhhhcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEECC--CCCeeeEecCCCEEEE-e
Confidence 7899999999999999999999999999 99999999 99999998 999999442 25789988 999999 9
Q ss_pred CC-CCcHH-HHHHHHHHHHhhhc
Q 019328 321 IA-SASKW-TREGMATLAALNVL 341 (342)
Q Consensus 321 ia-~~t~~-~~~~~~~~~~~ni~ 341 (342)
+| +.+.+ +..+++.++++|+.
T Consensus 394 ~atghp~e~~~~s~a~~~~~ni~ 416 (479)
T 1v8b_A 394 CATGHPAFVMSFSFCNQTFAQLD 416 (479)
T ss_dssp SSCCSCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCchhHHHHHHHHHHHHHH
Confidence 99 66756 67788888888874
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.97 E-value=6.1e-30 Score=240.24 Aligned_cols=215 Identities=15% Similarity=0.086 Sum_probs=166.0
Q ss_pred CCeEEEEeCCCCc-hHHHHHHHhCCCeEEEecCCCCC------CCHHHHHHHhcCCccEEEec----------------C
Q 019328 14 GKYRVVSTKPMPG-TRWINLLIEQDCRVEICTQKKTI------LSVEDIIALIGDKCDGVIGQ----------------L 70 (342)
Q Consensus 14 ~~~kvl~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~d~~i~~----------------~ 70 (342)
..|||++...... ..+.+.|.+.++++.+...++.. ...+++.+.+. ++|+++++ .
T Consensus 4 ~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~ii~~~~~~~~~~~i~~~~~~~ 82 (293)
T 3d4o_A 4 TGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWN-TVDAILLPISGTNEAGKVDTIFSNE 82 (293)
T ss_dssp TTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGG-GCSEEECCTTCCCTTCBCCBSSCSC
T ss_pred cCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHh-cCCEEEeccccccCCceeecccccC
Confidence 4577877654332 34567888889988765332211 12245555555 58999875 2
Q ss_pred CcCccHHHHHHhhccCCceEEEcccccCccCh-hHHHhCCceEEcCC------CCCchhHHHHHHHHHHHHHhchHHHHH
Q 019328 71 TEDWGETLFAALSRAGGKAFSNMAVGYNNVDV-NAANKYGIAVGNTP------GVLTETTAELAASLSLAAARRIVEADE 143 (342)
Q Consensus 71 ~~~~~~~~~~~~~~l~~k~i~~~g~G~d~id~-~~a~~~gI~v~n~p------~~~~~~vAE~al~l~L~~~R~~~~~~~ 143 (342)
..++++++++++|++ |+|+ +|+|++|+ ++|+++||.|+|+| ++++.+|||++++++|..
T Consensus 83 ~~~~~~~~l~~~~~l--~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~--------- 148 (293)
T 3d4o_A 83 SIVLTEEMIEKTPNH--CVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH--------- 148 (293)
T ss_dssp CCBCCHHHHHTSCTT--CEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred CccchHHHHHhCCCC--CEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh---------
Confidence 346899999999987 9987 79999998 89999999999998 889999999999998852
Q ss_pred HHHcCCCCCCCCCcccccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCcc
Q 019328 144 FMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT 223 (342)
Q Consensus 144 ~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (342)
.+.++.|+|+||||+|.||+.+|+++ ++||++|++|||++.+.... ..+ + ..
T Consensus 149 ---------------~~~~l~g~~v~IiG~G~iG~~~a~~l-~~~G~~V~~~dr~~~~~~~~--~~~-------g---~~ 200 (293)
T 3d4o_A 149 ---------------TDFTIHGANVAVLGLGRVGMSVARKF-AALGAKVKVGARESDLLARI--AEM-------G---ME 200 (293)
T ss_dssp ---------------CSSCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSHHHHHHH--HHT-------T---SE
T ss_pred ---------------cCCCCCCCEEEEEeeCHHHHHHHHHH-HhCCCEEEEEECCHHHHHHH--HHC-------C---Ce
Confidence 13579999999999999999999997 79999999999987542111 111 1 11
Q ss_pred ccccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCcc
Q 019328 224 WKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (342)
Q Consensus 224 ~~~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~ 276 (342)
.....++++++++||+|++|+|+ ++++++.|+.||+|+++||++||+.
T Consensus 201 ~~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 201 PFHISKAAQELRDVDVCINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp EEEGGGHHHHTTTCSEEEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred ecChhhHHHHhcCCCEEEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 11124789999999999999995 7899999999999999999999764
No 39
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.94 E-value=8.9e-27 Score=219.32 Aligned_cols=224 Identities=15% Similarity=0.100 Sum_probs=160.8
Q ss_pred CCC-CCeEEEEeCCCCc-hHHHHHHHhCCCeEEEecCCCCCC------CHHHHHHHhcCCccEEEec---C---------
Q 019328 11 NPN-GKYRVVSTKPMPG-TRWINLLIEQDCRVEICTQKKTIL------SVEDIIALIGDKCDGVIGQ---L--------- 70 (342)
Q Consensus 11 ~~~-~~~kvl~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~d~~i~~---~--------- 70 (342)
++| +.|||++...-.. ..+.+.|.+.++++.+...++... ..+++.+.+. ++|+++.. .
T Consensus 2 ~~~~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~-~~d~ii~~~~~~~~~~~i~s~ 80 (300)
T 2rir_A 2 NAMLTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQ-QIDSIILPVSATTGEGVVSTV 80 (300)
T ss_dssp CCCCCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGG-GCSEEECCSSCEETTTEECBS
T ss_pred CccccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHh-cCCEEEeccccccCCcccccc
Confidence 453 3568888754322 345677888899887653322211 1223444454 58999871 1
Q ss_pred --CcC--ccHHHHHHhhccCCceEEEcccccCccC-hhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHH
Q 019328 71 --TED--WGETLFAALSRAGGKAFSNMAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFM 145 (342)
Q Consensus 71 --~~~--~~~~~~~~~~~l~~k~i~~~g~G~d~id-~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~ 145 (342)
..+ +++++++++|++ |+|+ +|+|++| +++|+++||.|+|+|+++ ++ ++.|++..+
T Consensus 81 ~a~~~~~~~~~~l~~~~~l--~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~v---------~~~r~~~~~---- 140 (300)
T 2rir_A 81 FSNEEVVLKQDHLDRTPAH--CVIF---SGISNAYLENIAAQAKRKLVKLFERD--DI---------AIYNSIPTV---- 140 (300)
T ss_dssp SCSSCEECCHHHHHTSCTT--CEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--HH---------HHHHHHHHH----
T ss_pred cccCCccchHHHHhhcCCC--CEEE---EecCCHHHHHHHHHCCCEEEeecCCC--ce---------EEEcCccHH----
Confidence 245 789999999987 8887 8999999 999999999999999974 33 335666544
Q ss_pred HcCCCCCCCCCcccccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCcccc
Q 019328 146 RAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK 225 (342)
Q Consensus 146 ~~g~w~~w~~~~~~g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (342)
+|.|.. . ....+.++.|+|+||||+|.||+.+|+++ ++||++|++|||++.+... . ..+ + ....
T Consensus 141 -~g~~~~-~-~~~~~~~l~g~~v~IiG~G~iG~~~a~~l-~~~G~~V~~~d~~~~~~~~-~-~~~-------g---~~~~ 204 (300)
T 2rir_A 141 -EGTIML-A-IQHTDYTIHGSQVAVLGLGRTGMTIARTF-AALGANVKVGARSSAHLAR-I-TEM-------G---LVPF 204 (300)
T ss_dssp -HHHHHH-H-HHTCSSCSTTSEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSHHHHHH-H-HHT-------T---CEEE
T ss_pred -HHHHHH-H-HHhcCCCCCCCEEEEEcccHHHHHHHHHH-HHCCCEEEEEECCHHHHHH-H-HHC-------C---CeEE
Confidence 333420 0 01245789999999999999999999997 7999999999998754211 1 011 1 1111
Q ss_pred ccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCcc
Q 019328 226 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (342)
Q Consensus 226 ~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~ 276 (342)
...++++++++||+|++|+|+ ++++++.++.||+|+++||++||+.
T Consensus 205 ~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 205 HTDELKEHVKDIDICINTIPS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp EGGGHHHHSTTCSEEEECCSS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred chhhHHHHhhCCCEEEECCCh-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 135799999999999999996 7899999999999999999999864
No 40
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.92 E-value=7.9e-26 Score=225.31 Aligned_cols=211 Identities=15% Similarity=0.113 Sum_probs=163.8
Q ss_pred eEEEcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEE
Q 019328 89 AFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTV 168 (342)
Q Consensus 89 ~i~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktv 168 (342)
++-..|+|+|++ .++.++||.++|++++|. +|||+ .+|+++...+.+..+ |.. ..+..+.|++|
T Consensus 214 vveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~-------~~r~l~~~~~s~~~g----~~r--~~~~~l~GktV 277 (494)
T 3ce6_A 214 VTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKS-------KFDNKYGTRHSLIDG----INR--GTDALIGGKKV 277 (494)
T ss_dssp EEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------TTHHHHHHHHHHHHH----HHH--HHCCCCTTCEE
T ss_pred EEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHH-------HHhhhhhhhhhhhHH----HHh--ccCCCCCcCEE
Confidence 445889999998 788899999999999999 99994 345665544444443 321 22457899999
Q ss_pred EEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCc
Q 019328 169 GVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK 248 (342)
Q Consensus 169 GIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~ 248 (342)
+|+|+|.||+.+|+++ +++|++|+++|+++........ . ++. ..+++++++++|+|+.|++
T Consensus 278 ~IiG~G~IG~~~A~~l-ka~Ga~Viv~d~~~~~~~~A~~---------~-----Ga~-~~~l~e~l~~aDvVi~atg--- 338 (494)
T 3ce6_A 278 LICGYGDVGKGCAEAM-KGQGARVSVTEIDPINALQAMM---------E-----GFD-VVTVEEAIGDADIVVTATG--- 338 (494)
T ss_dssp EEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHHH---------T-----TCE-ECCHHHHGGGCSEEEECSS---
T ss_pred EEEccCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHHHH---------c-----CCE-EecHHHHHhCCCEEEECCC---
Confidence 9999999999999996 7999999999998765322111 1 111 3578899999999999975
Q ss_pred ccccccCHhHHccCCCCcEEEecCCCcc-CCHHHHHH-HHHcCCccEEEeecCCCCCCCCC--CccCCCceE----EcCC
Q 019328 249 TTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVE-HLKQNPMFRVGLDVFEDEPYMKP--GLSEMKNAI----VVPH 320 (342)
Q Consensus 249 ~t~~li~~~~l~~mk~gailIN~sRG~~-vd~~aL~~-aL~~g~i~gaalDV~~~EP~~~~--~L~~~~nvi----~TPH 320 (342)
+.++++.+.|+.||+|++++|+||++. +|+++|.+ +|+++++. +++|+|+.++. .+ .|+..+|++ +|||
T Consensus 339 -t~~~i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~-~~~l~LL~~grlvnL~~~TPH 415 (494)
T 3ce6_A 339 -NKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDT-GRSIIVLSEGRLLNLGNATGH 415 (494)
T ss_dssp -SSCSBCHHHHHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTT-CCEEEEEGGGSCHHHHHSCCS
T ss_pred -CHHHHHHHHHHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCc-chHHHHHhCCCEEeccCCCCC
Confidence 667899999999999999999999999 99999998 89888887 66899876432 33 477788998 9999
Q ss_pred CCCCcHHHHHHHHHHHHhhh
Q 019328 321 IASASKWTREGMATLAALNV 340 (342)
Q Consensus 321 ia~~t~~~~~~~~~~~~~ni 340 (342)
+++.+.+++ ...+.+|+
T Consensus 416 ~a~~~~~s~---~~qa~~ai 432 (494)
T 3ce6_A 416 PSFVMSNSF---ANQTIAQI 432 (494)
T ss_dssp CHHHHHHHH---HHHHHHHH
T ss_pred ccccchHHH---HHHHHHHH
Confidence 998777653 44444443
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.91 E-value=2.1e-23 Score=202.45 Aligned_cols=255 Identities=16% Similarity=0.138 Sum_probs=178.6
Q ss_pred HHHHHHhCCCeEEEecCC--CCCCCHHHHH-----------HHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEccc
Q 019328 29 WINLLIEQDCRVEICTQK--KTILSVEDII-----------ALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (342)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~--~~~~~~~~~~-----------~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~ 95 (342)
..+.|.+.|+++.+.... ...++.++.. +.+. ++|+| +....+.++++....+.. .++.....
T Consensus 22 ~v~~L~~~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~-~adii-~~vk~p~~~e~~~l~~~~--~l~~~~~~ 97 (377)
T 2vhw_A 22 GVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWA-DADLL-LKVKEPIAAEYGRLRHGQ--ILFTFLHL 97 (377)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHH-HCSEE-ECSSCCCGGGGGGCCTTC--EEEECCCG
T ss_pred HHHHHHhCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhc-cCCEE-EEeCCCChHHHhhcCCCC--EEEEEecc
Confidence 457787888888653221 2345666655 2222 37866 444556666665444443 67777778
Q ss_pred ccCccChhHHHhCCceEE----------cCCCCCchhHHHHHHHHHHHHH-hchHHHHHHHHcCCCCCCCCCcccccccC
Q 019328 96 GYNNVDVNAANKYGIAVG----------NTPGVLTETTAELAASLSLAAA-RRIVEADEFMRAGLYDGWLPNLFVGNLLK 164 (342)
Q Consensus 96 G~d~id~~~a~~~gI~v~----------n~p~~~~~~vAE~al~l~L~~~-R~~~~~~~~~~~g~w~~w~~~~~~g~~l~ 164 (342)
++|...++++.++||.+. |.|.++ ++||++..+++.+. |++ ...+.|+|..|.. ..++.
T Consensus 98 ~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s--~~ae~ag~~a~~~a~r~l----~~~~~g~~~~~~~----~~~l~ 167 (377)
T 2vhw_A 98 AASRACTDALLDSGTTSIAYETVQTADGALPLLA--PMSEVAGRLAAQVGAYHL----MRTQGGRGVLMGG----VPGVE 167 (377)
T ss_dssp GGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTH--HHHHHHHHHHHHHHHHHT----SGGGTSCCCCTTC----BTTBC
T ss_pred cCCHHHHHHHHHcCCeEEEeeeccccCCCccccC--chHHHHHHHHHHHHHHHH----HHhcCCCcccccC----CCCCC
Confidence 899999999999999997 666655 55699985554444 766 3345565532221 13799
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
|++|+|+|+|.||+.+|+.+ +++|++|+++|+++.... ...+.++.. .........+++++++++|+|+.++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a-~~~Ga~V~~~d~~~~~l~-~~~~~~g~~------~~~~~~~~~~l~~~l~~aDvVi~~~ 239 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIA-NGMGATVTVLDINIDKLR-QLDAEFCGR------IHTRYSSAYELEGAVKRADLVIGAV 239 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHH-HHHHHTTTS------SEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHHH-HHHHhcCCe------eEeccCCHHHHHHHHcCCCEEEECC
Confidence 99999999999999999996 799999999999876421 111111100 0000001236788899999999976
Q ss_pred --CCCcccccccCHhHHccCCCCcEEEecC--CCccCCHHHHHHHHHcCCccEEEeecCCC-CCCC-CCCccCCCceE--
Q 019328 245 --VLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDEVALVEHLKQNPMFRVGLDVFED-EPYM-KPGLSEMKNAI-- 316 (342)
Q Consensus 245 --plt~~t~~li~~~~l~~mk~gailIN~s--RG~~vd~~aL~~aL~~g~i~gaalDV~~~-EP~~-~~~L~~~~nvi-- 316 (342)
|.+ +|.++++++.++.||+|+++||+| +|+ ||+. ||.+ ++|++.++||+
T Consensus 240 ~~p~~-~t~~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~i~ 296 (377)
T 2vhw_A 240 LVPGA-KAPKLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTLFY 296 (377)
T ss_dssp CCTTS-CCCCCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEEEE
T ss_pred CcCCC-CCcceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEEEE
Confidence 655 789999999999999999999999 332 7888 8864 57899999998
Q ss_pred EcCCCCCCcHHH
Q 019328 317 VVPHIASASKWT 328 (342)
Q Consensus 317 ~TPHia~~t~~~ 328 (342)
+|||+++.+..+
T Consensus 297 ~~phl~~~~~~~ 308 (377)
T 2vhw_A 297 CVANMPASVPKT 308 (377)
T ss_dssp CBTTGGGGSHHH
T ss_pred ecCCcchhhHHH
Confidence 999999988663
No 42
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.84 E-value=1.7e-22 Score=197.76 Aligned_cols=150 Identities=21% Similarity=0.256 Sum_probs=118.8
Q ss_pred ccc-cCCCEEEEEccChHHHHHHHHHHhc-CCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcC
Q 019328 160 GNL-LKGQTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 160 g~~-l~gktvGIiG~G~IG~~vA~~l~~a-~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~s 237 (342)
|.+ |+||||||+|+|+||+.+|+++ ++ |||+|+++++..... + .....+++++++.+
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l-~~~~G~kVv~~sD~~g~~-------~-------------~~~gvdl~~L~~~~ 264 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIM-SEDFGMKVVAVSDSKGGI-------Y-------------NPDGLNADEVLKWK 264 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEEECSSCEE-------E-------------EEEEECHHHHHHHH
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHH-HHhcCCEEEEEeCCCccc-------c-------------CccCCCHHHHHHHH
Confidence 456 9999999999999999999997 78 999999995332110 0 00113677887766
Q ss_pred CE-EEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCC--CCccCCCc
Q 019328 238 DV-ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK--PGLSEMKN 314 (342)
Q Consensus 238 Di-V~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~--~~L~~~~n 314 (342)
|. .++ +|+ ++|++ |+.+.|..||+ .+|||++||.+||+++ +++|+.+.|+++| +||++. ++||.++|
T Consensus 265 d~~~~l-~~l-~~t~~-i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~ 334 (419)
T 1gtm_A 265 NEHGSV-KDF-PGATN-ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKG 334 (419)
T ss_dssp HHHSSS-TTC-TTSEE-ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTT
T ss_pred HhcCEe-ecC-ccCee-eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCC
Confidence 54 333 576 67888 89999999998 5999999999999999 6999999999998 899753 58999999
Q ss_pred eEEcCCC----C-----------------CCcHHHHHHHHHHHHhhh
Q 019328 315 AIVVPHI----A-----------------SASKWTREGMATLAALNV 340 (342)
Q Consensus 315 vi~TPHi----a-----------------~~t~~~~~~~~~~~~~ni 340 (342)
|++|||+ | |.+.+..++|.....+|+
T Consensus 335 V~itPhiaaNaGGvt~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~ 381 (419)
T 1gtm_A 335 ILQIPDFLCNAGGVTVSYFEWVQNITGYYWTIEEVRERLDKKMTKAF 381 (419)
T ss_dssp CEEECHHHHTTHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEECchhhhCCcceeeeehhhhcccccccCHHHHHHHHHHHHHHHH
Confidence 9999999 6 456667777777666654
No 43
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.80 E-value=1.7e-18 Score=167.43 Aligned_cols=271 Identities=15% Similarity=0.169 Sum_probs=166.4
Q ss_pred HHHHHHhCCCeEEEecCC--CCCCCHHHHHH----------HhcCCccEEEecCCcCccHHHHHHhhccCCceEEEcccc
Q 019328 29 WINLLIEQDCRVEICTQK--KTILSVEDIIA----------LIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVG 96 (342)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~G 96 (342)
..+.|.+.|+++.+-... ...++.++..+ .+ ++|+|+ ....++.++ ++.++. |.++++....+
T Consensus 22 ~v~~L~~~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~--~ad~il-~vk~p~~~~-~~~l~~-~~~~~~~~~~~ 96 (369)
T 2eez_A 22 GVESLVRRGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAW--GAEMVV-KVKEPLPEE-YGFLRE-GLILFTYLHLA 96 (369)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHT--TSSEEE-CSSCCCGGG-GGGCCT-TCEEEECCCGG
T ss_pred HHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEeccccee--cCCEEE-EECCCCHHH-HhhcCC-CcEEEEEeccc
Confidence 467787889888653322 13567777664 33 488876 334455444 555532 34888888899
Q ss_pred cCccChhHHHhCCceEE---cCCCC-Cc----hhHHHHHH--HHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCC
Q 019328 97 YNNVDVNAANKYGIAVG---NTPGV-LT----ETTAELAA--SLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQ 166 (342)
Q Consensus 97 ~d~id~~~a~~~gI~v~---n~p~~-~~----~~vAE~al--~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gk 166 (342)
.|..+++++.++||.+. +.+.. .. .++++.+- +.+++ ++.+... ..|+. .|... ..++.++
T Consensus 97 ~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a-~~~l~~~----~~g~~-~~~~~---~~~l~~~ 167 (369)
T 2eez_A 97 ADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVG-AQFLEKP----KGGRG-VLLGG---VPGVAPA 167 (369)
T ss_dssp GCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHH-HHHTSGG----GTSCC-CCTTC---BTBBCCC
T ss_pred CCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHH-HHHHHHh----cCCCc-eecCC---CCCCCCC
Confidence 99999999999999997 55543 11 44455444 33333 2223211 11211 11111 1479999
Q ss_pred EEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCC
Q 019328 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL 246 (342)
Q Consensus 167 tvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lpl 246 (342)
+|+|+|.|.||+.+|+.+ +++|++|+++|+++.... .....++.. .........++++++.++|+|+.|++.
T Consensus 168 ~V~ViGaG~iG~~~a~~l-~~~Ga~V~~~d~~~~~~~-~~~~~~g~~------~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 168 SVVILGGGTVGTNAAKIA-LGMGAQVTILDVNHKRLQ-YLDDVFGGR------VITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp EEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHH-HHHHHTTTS------EEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred EEEEECCCHHHHHHHHHH-HhCCCEEEEEECCHHHHH-HHHHhcCce------EEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 999999999999999996 799999999999875421 111111100 000001124677889999999999997
Q ss_pred Cc-ccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCC-CCCccCCCceE--------
Q 019328 247 DK-TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAI-------- 316 (342)
Q Consensus 247 t~-~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvi-------- 316 (342)
+. .+.+++.++.++.||+|+++||++-. .| |+ +||+ ||.+ ++|++..+|+.
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v~~~-------------~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp 300 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDVAVD-------------QG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANMP 300 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCSG
T ss_pred CccccchhHHHHHHHhhcCCCEEEEEecC-------------CC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCcc
Confidence 76 68889999999999999999999821 12 44 9998 6643 56889999999
Q ss_pred -EcCCCCCC--cHHHHHHHHHHHHhhh
Q 019328 317 -VVPHIASA--SKWTREGMATLAALNV 340 (342)
Q Consensus 317 -~TPHia~~--t~~~~~~~~~~~~~ni 340 (342)
.|||+|+. +.+....+..++.+|+
T Consensus 301 ~~~p~~as~~~~~~~~~~l~~l~~~g~ 327 (369)
T 2eez_A 301 GAVPRTSTFALTNQTLPYVLKLAEKGL 327 (369)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhcHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 88998884 5666777877777664
No 44
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.79 E-value=1e-18 Score=170.52 Aligned_cols=157 Identities=19% Similarity=0.265 Sum_probs=116.3
Q ss_pred EcccccCccC-hhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEE
Q 019328 92 NMAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV 170 (342)
Q Consensus 92 ~~g~G~d~id-~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGI 170 (342)
-.++|+..+. +.++.+.+|+|.|++.....+..+...+..-++.+.+ .+. .+.++.||||||
T Consensus 154 eTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi------~ra-----------tg~~L~GktVgI 216 (436)
T 3h9u_A 154 ETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGI------KRA-----------TDVMIAGKTACV 216 (436)
T ss_dssp CSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHH------HHH-----------HCCCCTTCEEEE
T ss_pred ccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHH------HHh-----------cCCcccCCEEEE
Confidence 3456665542 3455678999999987555554444333322222222 111 246899999999
Q ss_pred EccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccc
Q 019328 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (342)
Q Consensus 171 iG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t 250 (342)
+|+|.||+.+|++| ++|||+|+++|+++......... +. ...++++++++||+|++ ++.|
T Consensus 217 iG~G~IG~~vA~~L-ka~Ga~Viv~D~~p~~a~~A~~~--------------G~-~~~sL~eal~~ADVVil----t~gt 276 (436)
T 3h9u_A 217 CGYGDVGKGCAAAL-RGFGARVVVTEVDPINALQAAME--------------GY-QVLLVEDVVEEAHIFVT----TTGN 276 (436)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHHHT--------------TC-EECCHHHHTTTCSEEEE----CSSC
T ss_pred EeeCHHHHHHHHHH-HHCCCEEEEECCChhhhHHHHHh--------------CC-eecCHHHHHhhCCEEEE----CCCC
Confidence 99999999999997 79999999999987543222111 11 23589999999999996 4678
Q ss_pred ccccCHhHHccCCCCcEEEecCCCcc-CCHHHHHHH
Q 019328 251 YHLINKERLATMKKEAILVNCSRGPV-IDEVALVEH 285 (342)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~sRG~~-vd~~aL~~a 285 (342)
+++|+++.|+.||+|++|||+|||.+ ||.++|.+.
T Consensus 277 ~~iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 277 DDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp SCSBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred cCccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 99999999999999999999999998 999999875
No 45
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.77 E-value=2e-18 Score=168.64 Aligned_cols=237 Identities=14% Similarity=0.123 Sum_probs=152.8
Q ss_pred HHHHHHhCCCeEEEecCC--CCCCCHHHHHHH---------hcCCccEEEecCCcCccHHHHHHhhccCCceEEEccccc
Q 019328 29 WINLLIEQDCRVEICTQK--KTILSVEDIIAL---------IGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGY 97 (342)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~G~ 97 (342)
..+.|.+.|+++.+.... ...++.++..+. +- .+|+++.. ..+ .++.++.++. ++++|+..+.|+
T Consensus 29 ~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~-~adiil~v-k~p-~~~~i~~l~~-~~~li~~~~~~~ 104 (401)
T 1x13_A 29 TVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVW-QSEIILKV-NAP-LDDEIALLNP-GTTLVSFIWPAQ 104 (401)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGG-SSSEEECS-SCC-CHHHHTTCCT-TCEEEECCCGGG
T ss_pred HHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHh-cCCeEEEe-CCC-CHHHHHHhcC-CCcEEEEecCCC
Confidence 456777889888654322 124566776643 32 37887753 333 4666777632 349999999999
Q ss_pred CccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHH--HHHHHcCCC--CCCCCCc--ccccccCCCEEEEE
Q 019328 98 NNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEA--DEFMRAGLY--DGWLPNL--FVGNLLKGQTVGVI 171 (342)
Q Consensus 98 d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~--~~~~~~g~w--~~w~~~~--~~g~~l~gktvGIi 171 (342)
|++|++++.++||+|.+ .++|+|++.++.|.+++.+... ...++.+.| ..|.... ..| ++.|++|+|+
T Consensus 105 d~~~~~al~~~gI~v~~-----~e~v~~~~~a~~l~~l~~~a~~ag~~av~~~~~~~~~~~~~~~~~~g-~l~g~~V~Vi 178 (401)
T 1x13_A 105 NPELMQKLAERNVTVMA-----MDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAG-KVPPAKVMVI 178 (401)
T ss_dssp CHHHHHHHHHTTCEEEE-----GGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEETTE-EECCCEEEEE
T ss_pred CHHHHHHHHHCCCEEEE-----eehhhhhhhhcccchHHHHHHHHHHHHHHHHHHhcccccCCceeecc-CcCCCEEEEE
Confidence 99999999999999953 5566666665533333322221 233443333 1221110 012 5889999999
Q ss_pred ccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCC-----CCcccc---c-------cCCHHHHhhc
Q 019328 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-----QPVTWK---R-------ASSMDEVLRE 236 (342)
Q Consensus 172 G~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~-------~~~l~ell~~ 236 (342)
|+|.||..+++.+ +++|++|+++|+++...... ..++.....-.. ..-++. . ..+++++++.
T Consensus 179 GaG~iG~~aa~~a-~~~Ga~V~v~D~~~~~~~~~--~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~ 255 (401)
T 1x13_A 179 GAGVAGLAAIGAA-NSLGAIVRAFDTRPEVKEQV--QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE 255 (401)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSCGGGHHHH--HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHHHH--HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC
Confidence 9999999999996 79999999999987642211 111110000000 000000 0 0147788999
Q ss_pred CCEEEEc--CCCCcccccccCHhHHccCCCCcEEEecC--CCccCCH
Q 019328 237 ADVISLH--PVLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDE 279 (342)
Q Consensus 237 sDiV~l~--lplt~~t~~li~~~~l~~mk~gailIN~s--RG~~vd~ 279 (342)
+|+|+.| +|. ..+.++++++.++.||+|+++||+| ||+.+++
T Consensus 256 aDvVI~~~~~pg-~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 256 VDIIVTTALIPG-KPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp CSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred CCEEEECCccCC-CCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 9999999 554 3467899999999999999999999 8887765
No 46
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.75 E-value=9.3e-18 Score=163.59 Aligned_cols=156 Identities=15% Similarity=0.207 Sum_probs=113.8
Q ss_pred EcccccCccC-hhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEE
Q 019328 92 NMAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV 170 (342)
Q Consensus 92 ~~g~G~d~id-~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGI 170 (342)
-.++|+-++- ........+++.|+.+ ++..+-+-....+.+.+.... .|. .+.++.|||+||
T Consensus 190 eTtTGv~rL~~m~~~g~L~~PvinVnd----s~tK~~fDn~yG~~eslvdgI--~Ra-----------tg~~L~GKTVgV 252 (464)
T 3n58_A 190 ETTTGVNRLYQLQKKGLLPFPAINVND----SVTKSKFDNKYGCKESLVDGI--RRG-----------TDVMMAGKVAVV 252 (464)
T ss_dssp CSHHHHHHHHHHHHHTCCCSCEEECTT----SHHHHTTHHHHHHHHHHHHHH--HHH-----------HCCCCTTCEEEE
T ss_pred ccccchHHHHHHHHcCCCCCCEEeecc----HhhhhhhhhhhcchHHHHHHH--HHh-----------cCCcccCCEEEE
Confidence 4456665432 2223345688888765 555555555555544443222 111 246899999999
Q ss_pred EccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccc
Q 019328 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (342)
Q Consensus 171 iG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t 250 (342)
+|+|.||+.+|+++ ++|||+|+++|+++......... ++ ...++++++++||+|+++. .|
T Consensus 253 IG~G~IGr~vA~~l-rafGa~Viv~d~dp~~a~~A~~~--------------G~-~vv~LeElL~~ADIVv~at----gt 312 (464)
T 3n58_A 253 CGYGDVGKGSAQSL-AGAGARVKVTEVDPICALQAAMD--------------GF-EVVTLDDAASTADIVVTTT----GN 312 (464)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSHHHHHHHHHT--------------TC-EECCHHHHGGGCSEEEECC----SS
T ss_pred ECcCHHHHHHHHHH-HHCCCEEEEEeCCcchhhHHHhc--------------Cc-eeccHHHHHhhCCEEEECC----CC
Confidence 99999999999996 89999999999887543222111 11 2358999999999999863 47
Q ss_pred ccccCHhHHccCCCCcEEEecCCCcc-CCHHHHHH
Q 019328 251 YHLINKERLATMKKEAILVNCSRGPV-IDEVALVE 284 (342)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~sRG~~-vd~~aL~~ 284 (342)
+++|+++.|++||+|++|||+|||.+ +|.++|.+
T Consensus 313 ~~lI~~e~l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 313 KDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp SSSBCHHHHHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred ccccCHHHHhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 99999999999999999999999998 99999874
No 47
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.73 E-value=4.4e-17 Score=158.24 Aligned_cols=239 Identities=14% Similarity=0.163 Sum_probs=148.8
Q ss_pred HHHHHHhCCCeEEEecCCC--CCCCHHHHH-----------HHhcCCccEEEecCCcCc----cHHHHHHhhccCCceEE
Q 019328 29 WINLLIEQDCRVEICTQKK--TILSVEDII-----------ALIGDKCDGVIGQLTEDW----GETLFAALSRAGGKAFS 91 (342)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~--~~~~~~~~~-----------~~~~~~~d~~i~~~~~~~----~~~~~~~~~~l~~k~i~ 91 (342)
..+.|.+.|+++.+..... ..++.++.. +.+. ++|+++.. ..++ +++.++.++. +.++++
T Consensus 22 ~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~-~adiil~v-~~p~~~~~~~~~i~~l~~-~~~~i~ 98 (384)
T 1l7d_A 22 VVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALS-QADVVWKV-QRPMTAEEGTDEVALIKE-GAVLMC 98 (384)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHS-SCSEEEEE-ECCCCGGGSCCGGGGSCT-TCEEEE
T ss_pred HHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhc-CCCEEEEe-cCcccccCCHHHHHhhcc-CCEEEE
Confidence 4567777888876533221 245555554 3444 48988754 3344 5777787764 348898
Q ss_pred EcccccCccChhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCC--CCCCCcccc-cccCCCEE
Q 019328 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD--GWLPNLFVG-NLLKGQTV 168 (342)
Q Consensus 92 ~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~--~w~~~~~~g-~~l~gktv 168 (342)
....+.|+.+++++.++||.+++. +...+.+++..+. +|+..+.+ ..+..+..+.|. .|.+....+ .++.|++|
T Consensus 99 ~~~~~~~~~~~~~~~~~gi~~~~~-e~~~~~~~~~~l~-~l~~~a~~-ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V 175 (384)
T 1l7d_A 99 HLGALTNRPVVEALTKRKITAYAM-ELMPRISRAQSMD-ILSSQSNL-AGYRAVIDGAYEFARAFPMMMTAAGTVPPARV 175 (384)
T ss_dssp ECCGGGCHHHHHHHHHTTCEEEEG-GGCCCSGGGGGGC-HHHHHHHH-HHHHHHHHHHHHCSSCSSCEEETTEEECCCEE
T ss_pred EecccCCHHHHHHHHHCCCEEEEe-ccccccccccccc-hhhHHHHH-HHHHHHHHHHHHhhhcccchhccCCCCCCCEE
Confidence 999999999999999999999984 2222222222332 23333332 222333333331 122211112 37899999
Q ss_pred EEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhc---cCC----CCCcccccc----------CCHH
Q 019328 169 GVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK---ANG----EQPVTWKRA----------SSMD 231 (342)
Q Consensus 169 GIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~----------~~l~ 231 (342)
+|+|.|.||+.+++.+ +++|++|+++|+++...... ..++.... ... ...-++... ..++
T Consensus 176 ~ViGaG~iG~~aa~~a-~~~Ga~V~~~d~~~~~~~~~--~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~ 252 (384)
T 1l7d_A 176 LVFGVGVAGLQAIATA-KRLGAVVMATDVRAATKEQV--ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVL 252 (384)
T ss_dssp EEECCSHHHHHHHHHH-HHTTCEEEEECSCSTTHHHH--HHTTCEECCC-----------------------CCHHHHHH
T ss_pred EEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH--HHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHH
Confidence 9999999999999996 79999999999987542111 11221000 000 000000000 1278
Q ss_pred HHhhcCCEEEEcC--CCCcccccccCHhHHccCCCCcEEEecC--CCccC
Q 019328 232 EVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVI 277 (342)
Q Consensus 232 ell~~sDiV~l~l--plt~~t~~li~~~~l~~mk~gailIN~s--RG~~v 277 (342)
++++.+|+|+.|+ |.+ .+.++++++.++.||+|+++||++ ||+.+
T Consensus 253 ~~~~~aDvVi~~~~~pg~-~~~~li~~~~l~~mk~g~vivdva~~~gg~~ 301 (384)
T 1l7d_A 253 KELVKTDIAITTALIPGK-PAPVLITEEMVTKMKPGSVIIDLAVEAGGNC 301 (384)
T ss_dssp HHHTTCSEEEECCCCTTS-CCCCCSCHHHHTTSCTTCEEEETTGGGTCSS
T ss_pred HHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCCEEEEEecCCCCCe
Confidence 8899999999887 443 356789999999999999999999 87654
No 48
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.68 E-value=1.8e-16 Score=154.29 Aligned_cols=154 Identities=18% Similarity=0.292 Sum_probs=107.9
Q ss_pred cccccCccC-hhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEE
Q 019328 93 MAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (342)
Q Consensus 93 ~g~G~d~id-~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIi 171 (342)
..+|+-++- .....+..++|.|+.+..+.+--+ ....+...+.. .+++ ..+.++.||+++|+
T Consensus 164 TttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fD----n~yGt~~s~~~---gi~r----------at~~~L~GktV~Vi 226 (435)
T 3gvp_A 164 SVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFD----NLYCCRESILD---GLKR----------TTDMMFGGKQVVVC 226 (435)
T ss_dssp CHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHH----THHHHHHHHHH---HHHH----------HHCCCCTTCEEEEE
T ss_pred cchhHHHHHHHHHcCCCCCCEEEecchhhhhhhh----hhhhhHHHHHH---HHHH----------hhCceecCCEEEEE
Confidence 455554432 233345679999988854443333 22222211111 1111 12458999999999
Q ss_pred ccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccc
Q 019328 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (342)
Q Consensus 172 G~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~ 251 (342)
|+|.||+.+|+++ ++||++|+++|+++........+ ++ ...++++++++||+|++| +.|+
T Consensus 227 G~G~IGk~vA~~L-ra~Ga~Viv~D~dp~ra~~A~~~--------------G~-~v~~Leeal~~ADIVi~a----tgt~ 286 (435)
T 3gvp_A 227 GYGEVGKGCCAAL-KAMGSIVYVTEIDPICALQACMD--------------GF-RLVKLNEVIRQVDIVITC----TGNK 286 (435)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHHHT--------------TC-EECCHHHHTTTCSEEEEC----SSCS
T ss_pred eeCHHHHHHHHHH-HHCCCEEEEEeCChhhhHHHHHc--------------CC-EeccHHHHHhcCCEEEEC----CCCc
Confidence 9999999999997 89999999999987543222111 11 235899999999999995 5689
Q ss_pred cccCHhHHccCCCCcEEEecCCCcc-CCHHHHH
Q 019328 252 HLINKERLATMKKEAILVNCSRGPV-IDEVALV 283 (342)
Q Consensus 252 ~li~~~~l~~mk~gailIN~sRG~~-vd~~aL~ 283 (342)
++|+++.|+.||+|+++||+|||++ +|.++|.
T Consensus 287 ~lI~~e~l~~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 287 NVVTREHLDRMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp CSBCHHHHHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred ccCCHHHHHhcCCCcEEEEecCCCccCCHHHHH
Confidence 9999999999999999999999998 7877774
No 49
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.68 E-value=4.4e-18 Score=166.38 Aligned_cols=197 Identities=15% Similarity=0.230 Sum_probs=144.3
Q ss_pred ceEEEcccccCccChhHHH-----hCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCC-CCCCCcccc-
Q 019328 88 KAFSNMAVGYNNVDVNAAN-----KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD-GWLPNLFVG- 160 (342)
Q Consensus 88 k~i~~~g~G~d~id~~~a~-----~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~-~w~~~~~~g- 160 (342)
+.|...|+|+|++++.++. ++++.++|.+|. ..+++++.+..++.+.|++...... ..+.|. .|......+
T Consensus 83 ~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~-~~~~~s~a~~av~~a~~ 160 (404)
T 1gpj_A 83 RHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRI-SEGAVSIGSAAVELAER 160 (404)
T ss_dssp HHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSST-TCSCCSHHHHHHHHHHH
T ss_pred hhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhh-cCCCccHHHHHHHHHHH
Confidence 7788889999999999887 889999999997 5789999999999999998654322 223331 110000001
Q ss_pred --cccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcC
Q 019328 161 --NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 161 --~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~s 237 (342)
.++.|++|+|+|+|.||+.+++.+ +++|+ +|+++||+..+. +++...++. ......++++++..+
T Consensus 161 ~~~~l~g~~VlIiGaG~iG~~~a~~l-~~~G~~~V~v~~r~~~ra-~~la~~~g~----------~~~~~~~l~~~l~~a 228 (404)
T 1gpj_A 161 ELGSLHDKTVLVVGAGEMGKTVAKSL-VDRGVRAVLVANRTYERA-VELARDLGG----------EAVRFDELVDHLARS 228 (404)
T ss_dssp HHSCCTTCEEEEESCCHHHHHHHHHH-HHHCCSEEEEECSSHHHH-HHHHHHHTC----------EECCGGGHHHHHHTC
T ss_pred HhccccCCEEEEEChHHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HHHHHHcCC----------ceecHHhHHHHhcCC
Confidence 158999999999999999999997 68999 999999987542 122222211 011124688889999
Q ss_pred CEEEEcCCCCcccccccCHhHHcc--CC----CCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCC-CCCCcc
Q 019328 238 DVISLHPVLDKTTYHLINKERLAT--MK----KEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLS 310 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~~~~l~~--mk----~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~-~~~~L~ 310 (342)
|+|+.|+| .+..+++++.++. || ++.++||++ +|. .+++++
T Consensus 229 DvVi~at~---~~~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~ 276 (404)
T 1gpj_A 229 DVVVSATA---APHPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVE 276 (404)
T ss_dssp SEEEECCS---SSSCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGG
T ss_pred CEEEEccC---CCCceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCcccc
Confidence 99999976 4456778777876 42 556777765 365 357899
Q ss_pred CCCceEE--cCCCCCCcHHHHH
Q 019328 311 EMKNAIV--VPHIASASKWTRE 330 (342)
Q Consensus 311 ~~~nvi~--TPHia~~t~~~~~ 330 (342)
++|||++ |||+++.+.++.+
T Consensus 277 ~l~~v~l~d~d~l~~~~~~~~~ 298 (404)
T 1gpj_A 277 NIEDVEVRTIDDLRVIARENLE 298 (404)
T ss_dssp GSTTEEEEEHHHHHHHHHHHHH
T ss_pred ccCCeEEEeHhhHHHHHHHHHH
Confidence 9999999 9999998887654
No 50
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.36 E-value=8.8e-13 Score=124.13 Aligned_cols=119 Identities=13% Similarity=0.045 Sum_probs=92.7
Q ss_pred cccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCC
Q 019328 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 159 ~g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sD 238 (342)
..+....++|||||+|.||..+|+.| ...|.+|.+|||++..... +. . .+.....+++++++.||
T Consensus 15 ~~~~~~m~~I~iIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~~~-l~--------~-----~g~~~~~~~~~~~~~aD 79 (310)
T 3doj_A 15 VPRGSHMMEVGFLGLGIMGKAMSMNL-LKNGFKVTVWNRTLSKCDE-LV--------E-----HGASVCESPAEVIKKCK 79 (310)
T ss_dssp ---CCCSCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSGGGGHH-HH--------H-----TTCEECSSHHHHHHHCS
T ss_pred CcccccCCEEEEECccHHHHHHHHHH-HHCCCeEEEEeCCHHHHHH-HH--------H-----CCCeEcCCHHHHHHhCC
Confidence 34556678999999999999999998 5789999999998764321 11 1 11233578999999999
Q ss_pred EEEEcCCCCccccccc--CHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 239 VISLHPVLDKTTYHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 239 iV~l~lplt~~t~~li--~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
+|++|+|...+++.++ .++.+..+++|.++||+++..+...+.+.+.+.+..+.
T Consensus 80 vvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 135 (310)
T 3doj_A 80 YTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGR 135 (310)
T ss_dssp EEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred EEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 9999999766777666 25567789999999999999998889999998876443
No 51
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.35 E-value=9.8e-13 Score=123.50 Aligned_cols=112 Identities=18% Similarity=0.194 Sum_probs=93.0
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
|+||+||+|.||..+|++| ..-|.+|.+|||++++.. .+.+ .+.....++.|+++.||+|++|+|
T Consensus 4 ~kIgfIGlG~MG~~mA~~L-~~~G~~v~v~dr~~~~~~-~l~~-------------~Ga~~a~s~~e~~~~~dvv~~~l~ 68 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNL-LKAGYLLNVFDLVQSAVD-GLVA-------------AGASAARSARDAVQGADVVISMLP 68 (300)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSSHHHHH-HHHH-------------TTCEECSSHHHHHTTCSEEEECCS
T ss_pred CEEEEeeehHHHHHHHHHH-HhCCCeEEEEcCCHHHHH-HHHH-------------cCCEEcCCHHHHHhcCCceeecCC
Confidence 6899999999999999998 467999999999986532 2211 123456799999999999999999
Q ss_pred CCcccccccC--HhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 246 lt~~t~~li~--~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
..++.+.++. ...++.+++|.++||+|+..+-+...+.+.+++..+.
T Consensus 69 ~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~ 117 (300)
T 3obb_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLA 117 (300)
T ss_dssp CHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred chHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 9988888773 3478899999999999999999999999999987654
No 52
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.35 E-value=3.6e-12 Score=121.93 Aligned_cols=109 Identities=23% Similarity=0.291 Sum_probs=88.5
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-cCCEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~sDiV 240 (342)
++.||||+|+|+|+||+.+|+++ ++|||+|+++|+++.. .++.+.++ . ...+++++++ .||++
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l-~~~GakVvvsD~~~~~--~~~a~~~g------------a-~~v~~~ell~~~~DIl 235 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLA-AEAGAQLLVADTDTER--VAHAVALG------------H-TAVALEDVLSTPCDVF 235 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHH--HHHHHHTT------------C-EECCGGGGGGCCCSEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEeCCccH--HHHHHhcC------------C-EEeChHHhhcCcccee
Confidence 79999999999999999999997 7999999999998643 22222211 1 1246788888 99999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccE
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~g 293 (342)
+. .++.++|+++.++.|| ..+++|.+|+++.++++ .++|+++.+..
T Consensus 236 iP-----~A~~~~I~~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIlv 281 (355)
T 1c1d_A 236 AP-----CAMGGVITTEVARTLD-CSVVAGAANNVIADEAA-SDILHARGILY 281 (355)
T ss_dssp EE-----CSCSCCBCHHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCEE
T ss_pred cH-----hHHHhhcCHHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEEE
Confidence 84 3689999999999998 78999999999999888 58999887543
No 53
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.32 E-value=6.5e-12 Score=118.34 Aligned_cols=131 Identities=14% Similarity=0.058 Sum_probs=84.9
Q ss_pred HHHHHcCCCCCCCCCcccccccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCCh-hhHHHHHHhhhhhhhccCCC
Q 019328 142 DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-ATRLEKFVTAYGQFLKANGE 219 (342)
Q Consensus 142 ~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~-~~~~~~~~~~~~~~~~~~~~ 219 (342)
++..+.+.|..|.+.... .....++|||||+|.||..+|+.| ...|. +|++||+++ ....+... .
T Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~~~I~iIG~G~mG~~~A~~L-~~~G~~~V~~~dr~~~~~~~~~~~-~---------- 68 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLY-FQSNAMKLGFIGFGEAASAIASGL-RQAGAIDMAAYDAASAESWRPRAE-E---------- 68 (312)
T ss_dssp ------------------------CEEEEECCSHHHHHHHHHH-HHHSCCEEEEECSSCHHHHHHHHH-H----------
T ss_pred CcccccccccccCccccc-ccCCCCEEEEECccHHHHHHHHHH-HHCCCCeEEEEcCCCCHHHHHHHH-H----------
Confidence 456778888666543221 234567999999999999999998 46688 999999973 22222111 1
Q ss_pred CCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 220 QPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 220 ~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
.+.....++++++++||+|++|+|......- + .+....++++.++||+++.......++.+.+.+.
T Consensus 69 --~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~-~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 69 --LGVSCKASVAEVAGECDVIFSLVTAQAALEV-A-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRH 134 (312)
T ss_dssp --TTCEECSCHHHHHHHCSEEEECSCTTTHHHH-H-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHH
T ss_pred --CCCEEeCCHHHHHhcCCEEEEecCchhHHHH-H-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence 1123356899999999999999997665442 2 6677889999999999999999999999988875
No 54
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.32 E-value=1.8e-12 Score=121.82 Aligned_cols=117 Identities=14% Similarity=0.122 Sum_probs=93.7
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
.++..++|||||+|.||+.+|+.| ...|.+|++|||++.+... +.+ . +.....++++++++||+|
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~~~-~~~--------~-----g~~~~~~~~e~~~~aDvV 69 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVL-LKQGKRVAIWNRSPGKAAA-LVA--------A-----GAHLCESVKAALSASPAT 69 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSHHHHHH-HHH--------H-----TCEECSSHHHHHHHSSEE
T ss_pred cccCCCeEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH-HHH--------C-----CCeecCCHHHHHhcCCEE
Confidence 356678999999999999999998 5789999999999764321 111 0 123357899999999999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
++|+|...+++.++.++.+..+++|.++||++++.+.+.+.+.+.+++..+.
T Consensus 70 i~~vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~ 121 (306)
T 3l6d_A 70 IFVLLDNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH 121 (306)
T ss_dssp EECCSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE
T ss_pred EEEeCCHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 9999977778887754346667899999999999999999999999876543
No 55
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.32 E-value=2.6e-10 Score=109.82 Aligned_cols=249 Identities=12% Similarity=0.130 Sum_probs=138.9
Q ss_pred CCCCCeEEEEeCCCCc--------hHHHHHHHhCCCeEEEecCC--CCCCCHHHHHHHhc-----CCccEEEecCCcCcc
Q 019328 11 NPNGKYRVVSTKPMPG--------TRWINLLIEQDCRVEICTQK--KTILSVEDIIALIG-----DKCDGVIGQLTEDWG 75 (342)
Q Consensus 11 ~~~~~~kvl~~~~~~~--------~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~d~~i~~~~~~~~ 75 (342)
.|-++|+|-+.+.... ....+.|.+.|+++.+-... ...++.++..+.=. +.+|.|+. ... .+
T Consensus 18 ~~~~~m~IgvpkE~~~~E~RValtP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~adiIlk-Vk~-p~ 95 (381)
T 3p2y_A 18 GPGSMTLIGVPRESAEGERRVALVPKVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDPWPADVVVK-VNP-PT 95 (381)
T ss_dssp --CTTCEEEECCCCSTTCCCCSSCHHHHHHHHHTTCEEEECTTTTGGGTCCHHHHHHTTCEESCCTTSSEEEC-SSC-CC
T ss_pred CCCcceEEEEEecCCCCCceecCCHHHHHHHHhCCCEEEEeCCCCccCCCChHHHHHCCCEEeeeecCCEEEE-eCC-CC
Confidence 3566777766432211 23467787889988764432 23567777764311 12565543 222 24
Q ss_pred HHHHHHhhccCCceEEEcc-cccCccChhHHHhCCceEEc---CCCCC-c------hhHHHHHHHHHHHHHhchHHHHHH
Q 019328 76 ETLFAALSRAGGKAFSNMA-VGYNNVDVNAANKYGIAVGN---TPGVL-T------ETTAELAASLSLAAARRIVEADEF 144 (342)
Q Consensus 76 ~~~~~~~~~l~~k~i~~~g-~G~d~id~~~a~~~gI~v~n---~p~~~-~------~~vAE~al~l~L~~~R~~~~~~~~ 144 (342)
++-++.++. | +.+..+- ...|.=-++++.++||...- .|... + .++||.+=. +-.......
T Consensus 96 ~~e~~~l~~-g-~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAGy------~Av~~aa~~ 167 (381)
T 3p2y_A 96 SDEISQLKP-G-SVLIGFLAPRTQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGY------KAVLLGASL 167 (381)
T ss_dssp HHHHTTSCT-T-CEEEECCCTTTCHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHHH------HHHHHHHHH
T ss_pred hhHHhhccC-C-CEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHHH------HHHHHHHHH
Confidence 455566654 2 4444332 22233234777889988744 33211 1 223333221 111111111
Q ss_pred HHcCCCCCCCCCcccc-cccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhcc-----CC
Q 019328 145 MRAGLYDGWLPNLFVG-NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-----NG 218 (342)
Q Consensus 145 ~~~g~w~~w~~~~~~g-~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~-----~~ 218 (342)
-+. ..+....+ ..+.+++|+|+|+|.||..+|+.+ +++|++|++||+++...... ..++..... .+
T Consensus 168 --l~~---~~~~l~~~~~~v~~~kV~ViG~G~iG~~aa~~a-~~lGa~V~v~D~~~~~l~~~--~~lGa~~~~l~~~~~~ 239 (381)
T 3p2y_A 168 --STR---FVPMLTTAAGTVKPASALVLGVGVAGLQALATA-KRLGAKTTGYDVRPEVAEQV--RSVGAQWLDLGIDAAG 239 (381)
T ss_dssp --CSS---CSSCEECSSCEECCCEEEEESCSHHHHHHHHHH-HHHTCEEEEECSSGGGHHHH--HHTTCEECCCC-----
T ss_pred --hhh---hhhhhhcccCCcCCCEEEEECchHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH--HHcCCeEEeccccccc
Confidence 111 00111111 357899999999999999999996 79999999999997642211 112110000 00
Q ss_pred CCCc--------cccccCCHHHHhhcCCEEEEcC--CCCcccccccCHhHHccCCCCcEEEecC--CCccCC
Q 019328 219 EQPV--------TWKRASSMDEVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVID 278 (342)
Q Consensus 219 ~~~~--------~~~~~~~l~ell~~sDiV~l~l--plt~~t~~li~~~~l~~mk~gailIN~s--RG~~vd 278 (342)
.... ......++++++++||+|+.++ |. ..+.++++++.++.||||+++||+| +|+.+.
T Consensus 240 ~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e 310 (381)
T 3p2y_A 240 EGGYARELSEAERAQQQQALEDAITKFDIVITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNCE 310 (381)
T ss_dssp --------CHHHHHHHHHHHHHHHTTCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT
T ss_pred cccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCccc
Confidence 0000 0011236789999999999875 53 3467899999999999999999998 666554
No 56
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.32 E-value=2.2e-12 Score=120.90 Aligned_cols=114 Identities=11% Similarity=0.126 Sum_probs=91.1
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
++|||||+|.||..+|++|+ .-|.+|++|||++++.. . ....+.....++.|+++.||+|++|+|
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~-~~G~~V~v~dr~~~~~~-~-------------l~~~G~~~~~s~~e~~~~~dvvi~~l~ 70 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILL-EAGYELVVWNRTASKAE-P-------------LTKLGATVVENAIDAITPGGIVFSVLA 70 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEC-------C-T-------------TTTTTCEECSSGGGGCCTTCEEEECCS
T ss_pred CcEEEEecHHHHHHHHHHHH-HCCCeEEEEeCCHHHHH-H-------------HHHcCCeEeCCHHHHHhcCCceeeecc
Confidence 58999999999999999984 67999999999876421 1 112234456799999999999999999
Q ss_pred CCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEE
Q 019328 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ga 294 (342)
..+..+..+....+..+++|.++|++|...+-+.+.+.+.+.+..+...
T Consensus 71 ~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~l 119 (297)
T 4gbj_A 71 DDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYV 119 (297)
T ss_dssp SHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred chhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCcee
Confidence 8888888888889999999999999999999999999999998765443
No 57
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.30 E-value=2.1e-11 Score=115.08 Aligned_cols=156 Identities=15% Similarity=0.113 Sum_probs=103.7
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHH-HhhcCC
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE-VLREAD 238 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e-ll~~sD 238 (342)
.+..++|||||+|.||+.+|+.| +..|. +|++||+++...... .. .+. ......++++ ++++||
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l-~~~G~~~~V~~~dr~~~~~~~a--~~-------~G~---~~~~~~~~~~~~~~~aD 96 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSL-RRSGFKGKIYGYDINPESISKA--VD-------LGI---IDEGTTSIAKVEDFSPD 96 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHH-HHTTCCSEEEEECSCHHHHHHH--HH-------TTS---CSEEESCTTGGGGGCCS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHH-HhCCCCCEEEEEECCHHHHHHH--HH-------CCC---cchhcCCHHHHhhccCC
Confidence 45568999999999999999997 57788 999999987643221 11 111 1112357888 899999
Q ss_pred EEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCC---C-CCCCccCCCc
Q 019328 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEP---Y-MKPGLSEMKN 314 (342)
Q Consensus 239 iV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP---~-~~~~L~~~~n 314 (342)
+|++|+|... +..++ ++....+++++++++++.......+++.+.+.. ++.+. -=++-.|- . ....|+.-..
T Consensus 97 vVilavp~~~-~~~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~~-hPm~G~e~sG~~~A~~~Lf~g~~ 172 (314)
T 3ggo_A 97 FVMLSSPVRT-FREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVGG-HPIAGTEKSGVEYSLDNLYEGKK 172 (314)
T ss_dssp EEEECSCGGG-HHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEECE-EECCCCCCCSGGGCCTTTTTTCE
T ss_pred EEEEeCCHHH-HHHHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEec-CcccCCcccchhhhhhhhhcCCE
Confidence 9999999543 44444 566677999999999987765445666666654 22221 11332221 1 1236888889
Q ss_pred eEEcCCCCCCcHHHHHHHHHH
Q 019328 315 AIVVPHIASASKWTREGMATL 335 (342)
Q Consensus 315 vi~TPHia~~t~~~~~~~~~~ 335 (342)
+++||+- +.+.+..+.+...
T Consensus 173 ~il~~~~-~~~~~~~~~v~~l 192 (314)
T 3ggo_A 173 VILTPTK-KTDKKRLKLVKRV 192 (314)
T ss_dssp EEECCCT-TSCHHHHHHHHHH
T ss_pred EEEEeCC-CCCHHHHHHHHHH
Confidence 9999984 3455655554443
No 58
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.28 E-value=6.6e-12 Score=118.66 Aligned_cols=116 Identities=13% Similarity=0.082 Sum_probs=92.9
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
....++|||||+|.||+.+|+.| ...|.+|.+|||++.+.. .+. .. +.....++++++++||+|+
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~~-~l~--------~~-----g~~~~~~~~e~~~~aDvVi 92 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRL-CEAGYALQVWNRTPARAA-SLA--------AL-----GATIHEQARAAARDADIVV 92 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHH-HHTTCEEEEECSCHHHHH-HHH--------TT-----TCEEESSHHHHHTTCSEEE
T ss_pred ccCCCEEEEECccHHHHHHHHHH-HhCCCeEEEEcCCHHHHH-HHH--------HC-----CCEeeCCHHHHHhcCCEEE
Confidence 34678999999999999999998 578999999999976432 111 11 2234578999999999999
Q ss_pred EcCCCCcccccccCH-hHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 242 LHPVLDKTTYHLINK-ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 242 l~lplt~~t~~li~~-~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
+|+|....++.++.. +.+..+++|.++||++++.+.+.+.+.+.+.+..+.
T Consensus 93 ~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 144 (320)
T 4dll_A 93 SMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIA 144 (320)
T ss_dssp ECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred EECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE
Confidence 999977777776643 567789999999999999999999999999886554
No 59
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.27 E-value=4e-11 Score=110.74 Aligned_cols=150 Identities=16% Similarity=0.131 Sum_probs=101.6
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-cCCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~sDiV~l 242 (342)
++|||||+|.||+.+|+.| ...|. +|++||+++..... . ..+ +.. .....+++++++ +||+|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l-~~~g~~~~V~~~d~~~~~~~~-~-~~~-------g~~---~~~~~~~~~~~~~~aDvVil 68 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSL-RRSGFKGKIYGYDINPESISK-A-VDL-------GII---DEGTTSIAKVEDFSPDFVML 68 (281)
T ss_dssp CEEEEESCSHHHHHHHHHH-HHTTCCSEEEEECSCHHHHHH-H-HHT-------TSC---SEEESCGGGGGGTCCSEEEE
T ss_pred cEEEEEecCHHHHHHHHHH-HhcCCCcEEEEEeCCHHHHHH-H-HHC-------CCc---ccccCCHHHHhcCCCCEEEE
Confidence 5899999999999999997 56777 99999998754321 1 111 111 011357888889 9999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCC---CC-CCCccCCCceEEc
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEP---YM-KPGLSEMKNAIVV 318 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP---~~-~~~L~~~~nvi~T 318 (342)
|+|.. .+..++. +....+++++++++++++.....+.+.+.+.++-+.+ .-++..|. .. ..+|+..++++++
T Consensus 69 avp~~-~~~~v~~-~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~~--~p~~~~~~~gp~~a~~~l~~g~~~~~~ 144 (281)
T 2g5c_A 69 SSPVR-TFREIAK-KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEGKKVILT 144 (281)
T ss_dssp CSCHH-HHHHHHH-HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECE--EEECCCSCCSGGGCCSSTTTTCEEEEC
T ss_pred cCCHH-HHHHHHH-HHHhhCCCCcEEEECCCCcHHHHHHHHHhccccceee--ccccCCccCChhhhhhHHhCCCCEEEe
Confidence 99943 4555543 4566789999999999988766677888887641111 12343332 11 2367788889999
Q ss_pred CCCCCCcHHHHHHHH
Q 019328 319 PHIASASKWTREGMA 333 (342)
Q Consensus 319 PHia~~t~~~~~~~~ 333 (342)
||.++ +.+..+.+.
T Consensus 145 ~~~~~-~~~~~~~v~ 158 (281)
T 2g5c_A 145 PTKKT-DKKRLKLVK 158 (281)
T ss_dssp CCSSS-CHHHHHHHH
T ss_pred cCCCC-CHHHHHHHH
Confidence 99765 344444443
No 60
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.26 E-value=7.7e-11 Score=109.38 Aligned_cols=157 Identities=13% Similarity=0.078 Sum_probs=105.6
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhh----hhhhccC-CCCC-------ccccccCCHHHH
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAY----GQFLKAN-GEQP-------VTWKRASSMDEV 233 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~----~~~~~~~-~~~~-------~~~~~~~~l~el 233 (342)
++|||||.|.||+.+|+.+ ...|++|++||++++..... .+.. ....... +... .......+++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~l-a~~G~~V~l~d~~~~~~~~~-~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQT-AFHGFAVTAYDINTDALDAA-KKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSHHHHHHH-HHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHH-HhCCCeEEEEeCCHHHHHHH-HHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 6899999999999999997 47799999999997642211 1110 0000000 0000 001234688999
Q ss_pred hhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCC
Q 019328 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMK 313 (342)
Q Consensus 234 l~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~ 313 (342)
+++||+|+.++|.+.+.+..+.++..+.+++++++++.+.+ +....+.+++... -...++..|. |.+..+
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~~-------p~~~~~ 152 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFAN-------HVWVNN 152 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEECS-------STTTSC
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccCC-------CcccCc
Confidence 99999999999988778877777888889999999954444 3567888887543 3556666553 456678
Q ss_pred ceEEcCCCCCCcHHHHHHHHHH
Q 019328 314 NAIVVPHIASASKWTREGMATL 335 (342)
Q Consensus 314 nvi~TPHia~~t~~~~~~~~~~ 335 (342)
.+.++||- ..+.+..+.+...
T Consensus 153 lvevv~~~-~t~~~~~~~~~~l 173 (283)
T 4e12_A 153 TAEVMGTT-KTDPEVYQQVVEF 173 (283)
T ss_dssp EEEEEECT-TSCHHHHHHHHHH
T ss_pred eEEEEeCC-CCCHHHHHHHHHH
Confidence 88899984 3345555544443
No 61
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.25 E-value=1.9e-11 Score=117.45 Aligned_cols=123 Identities=15% Similarity=0.237 Sum_probs=96.4
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcC---C
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA---D 238 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~s---D 238 (342)
.+.+++|||||+|.||+.+|+.| ...|.+|.+|||++.... .+. .. +.....+++++++.+ |
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L-~~~G~~V~v~dr~~~~~~-~l~--------~~-----g~~~~~s~~e~~~~a~~~D 83 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRL-RKGGHECVVYDLNVNAVQ-ALE--------RE-----GIAGARSIEEFCAKLVKPR 83 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHH-HHH--------TT-----TCBCCSSHHHHHHHSCSSC
T ss_pred hhcCCEEEEECchHHHHHHHHHH-HhCCCEEEEEeCCHHHHH-HHH--------HC-----CCEEeCCHHHHHhcCCCCC
Confidence 35678999999999999999998 578999999999876432 111 11 123356899999999 9
Q ss_pred EEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCC
Q 019328 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFED 301 (342)
Q Consensus 239 iV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~ 301 (342)
+|++|+|.. .++.++ .+.+..+++|.++|+++++...+...+.+.+.+..+......|+-.
T Consensus 84 vVi~~vp~~-~v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg 144 (358)
T 4e21_A 84 VVWLMVPAA-VVDSML-QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGG 144 (358)
T ss_dssp EEEECSCGG-GHHHHH-HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECG
T ss_pred EEEEeCCHH-HHHHHH-HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCC
Confidence 999999976 677766 5677889999999999999999999999999987776555555543
No 62
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.25 E-value=2.1e-11 Score=111.99 Aligned_cols=197 Identities=17% Similarity=0.127 Sum_probs=127.0
Q ss_pred HHHHHhCCCeEEEecCCCCCCCHHHHHHHhcC---CccEEEecCCcCccHHHHHHhhccCCceEEEcccccCccChhHHH
Q 019328 30 INLLIEQDCRVEICTQKKTILSVEDIIALIGD---KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (342)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~G~d~id~~~a~ 106 (342)
...+++.|.+..+... ..+++++.+.+.. ..+++.+. .+..++++..++++ +.+++...|+|.++.
T Consensus 21 ~~~~~~~g~~~~y~~~---~~~~~~l~~~i~~l~~~~~G~~vt--~P~k~~i~~~~~~l--~~~a~~~gavn~i~~---- 89 (263)
T 2d5c_A 21 AFALESLGLEGSYEAW---DTPLEALPGRLKEVRRAFRGVNLT--LPLKEAALAHLDWV--SPEAQRIGAVNTVLQ---- 89 (263)
T ss_dssp HHHHHHTTCCEEEEEE---ECCGGGHHHHHHHHHHHCSEEEEC--TTCTTGGGGGCSEE--CHHHHHHTCCCEEEE----
T ss_pred HHHHHHcCCCCEEEEE---eCCHHHHHHHHHhccccCceEEEc--ccCHHHHHHHHHHH--hHHHHHhCCCCcEEc----
Confidence 3456677877655432 1344555544431 13444443 35667777777765 666777788998875
Q ss_pred hCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccChHHHHHHHHHHh
Q 019328 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (342)
Q Consensus 107 ~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~IG~~vA~~l~~ 186 (342)
+.| +..|+|++. .+++.++.| . +.++.| +++|||.|.||+.+|+.| .
T Consensus 90 ~~g----~~~g~ntd~-----~g~~~~l~~----------~------------~~~l~~-~v~iiG~G~~g~~~a~~l-~ 136 (263)
T 2d5c_A 90 VEG----RLFGFNTDA-----PGFLEALKA----------G------------GIPLKG-PALVLGAGGAGRAVAFAL-R 136 (263)
T ss_dssp ETT----EEEEECCHH-----HHHHHHHHH----------T------------TCCCCS-CEEEECCSHHHHHHHHHH-H
T ss_pred cCC----eEEEeCCCH-----HHHHHHHHH----------h------------CCCCCC-eEEEECCcHHHHHHHHHH-H
Confidence 334 223555543 244444332 1 236889 999999999999999997 5
Q ss_pred cCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCC--cccccccCHhHHccCCC
Q 019328 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLD--KTTYHLINKERLATMKK 264 (342)
Q Consensus 187 a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt--~~t~~li~~~~l~~mk~ 264 (342)
..|++|.++||+.++. +.+.+.++ . . ..+++++ +++|+|++|+|.. +++...+. .+.+++
T Consensus 137 ~~g~~v~v~~r~~~~~-~~l~~~~~-------~-----~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~ 198 (263)
T 2d5c_A 137 EAGLEVWVWNRTPQRA-LALAEEFG-------L-----R-AVPLEKA-REARLLVNATRVGLEDPSASPLP---AELFPE 198 (263)
T ss_dssp HTTCCEEEECSSHHHH-HHHHHHHT-------C-----E-ECCGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCS
T ss_pred HCCCEEEEEECCHHHH-HHHHHHhc-------c-----c-hhhHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCC
Confidence 7889999999987542 22222221 0 1 2477888 9999999999976 23334453 467899
Q ss_pred CcEEEecCCCccCCHHHHHHHHHcCC
Q 019328 265 EAILVNCSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 265 gailIN~sRG~~vd~~aL~~aL~~g~ 290 (342)
|.++++++.+. .+. .|.+++++..
T Consensus 199 g~~viD~~~~p-~~t-~l~~~a~~~g 222 (263)
T 2d5c_A 199 EGAAVDLVYRP-LWT-RFLREAKAKG 222 (263)
T ss_dssp SSEEEESCCSS-SSC-HHHHHHHHTT
T ss_pred CCEEEEeecCC-ccc-HHHHHHHHCc
Confidence 99999999874 344 4777777643
No 63
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.23 E-value=1.1e-11 Score=115.15 Aligned_cols=112 Identities=16% Similarity=0.059 Sum_probs=90.2
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
++|||||+|.||+.+|+.| ...|.+|.+|||++.... .+. .. +.....++++++++||+|++|+|
T Consensus 2 ~~i~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~~-~~~--------~~-----g~~~~~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNL-VKAGCSVTIWNRSPEKAE-ELA--------AL-----GAERAATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSGGGGH-HHH--------HT-----TCEECSSHHHHHHHCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHH-HHCCCeEEEEcCCHHHHH-HHH--------HC-----CCeecCCHHHHHhcCCEEEEEcC
Confidence 6899999999999999998 578999999999876432 111 11 12345789999999999999999
Q ss_pred CCcccccccC--HhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 246 lt~~t~~li~--~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
...+++.++. ++.+..+++|.++||+++..+.+.+.+.+.+++..+.
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pef_A 67 DPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR 115 (287)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE
Confidence 7667777662 5667789999999999999999999999998876443
No 64
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.23 E-value=8.8e-12 Score=116.50 Aligned_cols=111 Identities=21% Similarity=0.252 Sum_probs=90.1
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
.++|||||+|.||+.+|+.| ...|.+|.+||+++..... +. .. +.....+++++++ ||+|++|+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~~~-~~--------~~-----g~~~~~~~~~~~~-aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRM-TEWPGGVTVYDIRIEAMTP-LA--------EA-----GATLADSVADVAA-ADLIHITV 78 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHH-TTSTTCEEEECSSTTTSHH-HH--------HT-----TCEECSSHHHHTT-SSEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHH-HHCCCeEEEEeCCHHHHHH-HH--------HC-----CCEEcCCHHHHHh-CCEEEEEC
Confidence 36899999999999999998 5789999999998764221 11 11 1233568999999 99999999
Q ss_pred CCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
|...+++.++ ++.+..+++|.++||+++..+...+.+.+.+.+..+.
T Consensus 79 p~~~~~~~v~-~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 125 (296)
T 3qha_A 79 LDDAQVREVV-GELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIH 125 (296)
T ss_dssp SSHHHHHHHH-HHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCE
T ss_pred CChHHHHHHH-HHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCE
Confidence 9777777776 6778889999999999999999999999999876443
No 65
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.19 E-value=1e-11 Score=115.30 Aligned_cols=112 Identities=15% Similarity=0.072 Sum_probs=89.0
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
++|||||+|.||..+|+.| ...|.+|++|||++.+... +.+ . +.....++++++++||+|++|+|
T Consensus 2 ~~I~iiG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~~~-~~~--------~-----g~~~~~~~~~~~~~advvi~~v~ 66 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANL-VRAGFDVTVWNRNPAKCAP-LVA--------L-----GARQASSPAEVCAACDITIAMLA 66 (287)
T ss_dssp CCEEEECCSTTHHHHHHHH-HHHTCCEEEECSSGGGGHH-HHH--------H-----TCEECSCHHHHHHHCSEEEECCS
T ss_pred CeEEEEccCHHHHHHHHHH-HHCCCeEEEEcCCHHHHHH-HHH--------C-----CCeecCCHHHHHHcCCEEEEEcC
Confidence 4799999999999999998 4678999999999765321 111 0 12335689999999999999999
Q ss_pred CCcccccccC--HhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 246 lt~~t~~li~--~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
..++++.++. ++.+..+++|.++||++++.+...+.+.+.+.+..+.
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pdu_A 67 DPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGR 115 (287)
T ss_dssp SHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 7667777662 4567789999999999999998889999998875443
No 66
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.19 E-value=1.3e-11 Score=115.55 Aligned_cols=112 Identities=19% Similarity=0.155 Sum_probs=88.6
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccc-cCCHHHHhhcCCEEEEc
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR-ASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ell~~sDiV~l~ 243 (342)
.++|||||+|.||..+|+.| ...|.+|++|||++.... ... ..+ ... ..+++++++.||+|++|
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~~-~~~--------~~g-----~~~~~~~~~e~~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSC-LRAGLSTWGADLNPQACA-NLL--------AEG-----ACGAAASAREFAGVVDALVIL 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHH-HHH--------HTT-----CSEEESSSTTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHH-HHCCCeEEEEECCHHHHH-HHH--------HcC-----CccccCCHHHHHhcCCEEEEE
Confidence 46899999999999999998 578999999999876432 111 111 122 46888999999999999
Q ss_pred CCCCcccccccC--HhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCc
Q 019328 244 PVLDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 244 lplt~~t~~li~--~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i 291 (342)
+|.+..++.++. ++.+..+++|.++||+++..+...+.+.+.+.+..+
T Consensus 72 vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~ 121 (303)
T 3g0o_A 72 VVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNL 121 (303)
T ss_dssp CSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred CCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 997666777653 456678999999999999998888999999887544
No 67
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.19 E-value=1.6e-10 Score=114.33 Aligned_cols=154 Identities=18% Similarity=0.254 Sum_probs=103.4
Q ss_pred EcccccCccC-hhHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEE
Q 019328 92 NMAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV 170 (342)
Q Consensus 92 ~~g~G~d~id-~~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGI 170 (342)
-..+|+..+. +.......|+|.|+.+....+--+...+.--+ +..+.|. ..+.++.||+++|
T Consensus 208 eTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~~s-----------l~dgi~r------~tg~~L~GKtVvV 270 (488)
T 3ond_A 208 ETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHS-----------LPDGLMR------ATDVMIAGKVAVV 270 (488)
T ss_dssp CSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHH-----------HHHHHHH------HHCCCCTTCEEEE
T ss_pred cccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhccccHH-----------HHHHHHH------HcCCcccCCEEEE
Confidence 4466776542 22333567999999775444322222221111 1111110 1235799999999
Q ss_pred EccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccc
Q 019328 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (342)
Q Consensus 171 iG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t 250 (342)
+|+|.||+.+|++| +++|++|+++|+++....+.... + ....++++++..+|+|+.+. .+
T Consensus 271 tGaGgIG~aiA~~L-aa~GA~Viv~D~~~~~a~~Aa~~---------g------~dv~~lee~~~~aDvVi~at----G~ 330 (488)
T 3ond_A 271 AGYGDVGKGCAAAL-KQAGARVIVTEIDPICALQATME---------G------LQVLTLEDVVSEADIFVTTT----GN 330 (488)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHHHT---------T------CEECCGGGTTTTCSEEEECS----SC
T ss_pred ECCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHHHHHHh---------C------CccCCHHHHHHhcCEEEeCC----CC
Confidence 99999999999997 79999999999987543221110 1 12357889999999999763 46
Q ss_pred ccccCHhHHccCCCCcEEEecCCCcc-CCHHHH
Q 019328 251 YHLINKERLATMKKEAILVNCSRGPV-IDEVAL 282 (342)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~sRG~~-vd~~aL 282 (342)
.++++.+.|+.||++++++|++++.. ++...+
T Consensus 331 ~~vl~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l 363 (488)
T 3ond_A 331 KDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGL 363 (488)
T ss_dssp SCSBCHHHHTTSCTTEEEEESSSTTTTBTHHHH
T ss_pred hhhhhHHHHHhcCCCeEEEEcCCCCcccchHHH
Confidence 78899999999999999999999832 344433
No 68
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.16 E-value=4e-11 Score=111.90 Aligned_cols=111 Identities=19% Similarity=0.207 Sum_probs=88.9
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
++|||||+|.||+.+|+.| ...|.+|++|||++.... .+. .. +.....++++++++||+|++|+|
T Consensus 4 ~~I~iiG~G~mG~~~a~~l-~~~G~~V~~~d~~~~~~~-~~~--------~~-----g~~~~~~~~~~~~~aDvvi~~vp 68 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNL-LKAGYLLNVFDLVQSAVD-GLV--------AA-----GASAARSARDAVQGADVVISMLP 68 (302)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSSHHHHH-HHH--------HT-----TCEECSSHHHHHTTCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHH-HhCCCeEEEEcCCHHHHH-HHH--------HC-----CCeEcCCHHHHHhCCCeEEEECC
Confidence 6899999999999999998 578999999999876432 111 11 12345789999999999999999
Q ss_pred CCcccccccC--HhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCc
Q 019328 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 246 lt~~t~~li~--~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i 291 (342)
...+++.++. .+.+..++++.++||++++.....+.+.+.+.+..+
T Consensus 69 ~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~ 116 (302)
T 2h78_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL 116 (302)
T ss_dssp CHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 7767777664 256778999999999999999888899999887533
No 69
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.16 E-value=6.7e-11 Score=111.69 Aligned_cols=124 Identities=16% Similarity=0.054 Sum_probs=90.2
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCC-cEEEEEcCChh--hHHHHHHhhhhhhhccCCCCCccccccC-CHHHHhhcCCEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQA--TRLEKFVTAYGQFLKANGEQPVTWKRAS-SMDEVLREADVI 240 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g-~~V~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ell~~sDiV 240 (342)
.++|||||+|.||..+|+.| ...| .+|++||++++ ...++..+.+ ...+ . .. ++++++++||+|
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L-~~~G~~~V~~~dr~~~~~~~~~~~~~~~----~~~g-----~--~~~s~~e~~~~aDvV 91 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGL-GGRNAARLAAYDLRFNDPAASGALRARA----AELG-----V--EPLDDVAGIACADVV 91 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HTTTCSEEEEECGGGGCTTTHHHHHHHH----HHTT-----C--EEESSGGGGGGCSEE
T ss_pred CCeEEEECccHHHHHHHHHH-HHcCCCeEEEEeCCCccccchHHHHHHH----HHCC-----C--CCCCHHHHHhcCCEE
Confidence 47899999999999999998 5789 99999999862 0000111110 1111 1 35 788999999999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCC
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE 302 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~E 302 (342)
++|+|.......+ .+.+..+++|.++||+++..+...+.+.+.+.+..+....--|+-++
T Consensus 92 i~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~ 151 (317)
T 4ezb_A 92 LSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARV 151 (317)
T ss_dssp EECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCS
T ss_pred EEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCc
Confidence 9999976655543 67778899999999999999999999999998765433222355433
No 70
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.15 E-value=3e-11 Score=109.81 Aligned_cols=109 Identities=10% Similarity=0.142 Sum_probs=66.3
Q ss_pred CCCCCCCCcccccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhH-------------HHHHHhhhhhhhc
Q 019328 149 LYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATR-------------LEKFVTAYGQFLK 215 (342)
Q Consensus 149 ~w~~w~~~~~~g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~-------------~~~~~~~~~~~~~ 215 (342)
.|..|.+......++.+++|||||+|.||+.+|+.| ...|.+|++|||++... ...+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~kIgiIG~G~mG~alA~~L-~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------ 75 (245)
T 3dtt_A 3 SDKIHHHHHHENLYFQGMKIAVLGTGTVGRTMAGAL-ADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPE------ 75 (245)
T ss_dssp ----------------CCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHHTCC-------CCHHHHGGG------
T ss_pred cccccccccccccccCCCeEEEECCCHHHHHHHHHH-HHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhh------
Confidence 344444444456789999999999999999999998 57899999999987641 1111100
Q ss_pred cCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHhH-HccCCCCcEEEecCC
Q 019328 216 ANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKER-LATMKKEAILVNCSR 273 (342)
Q Consensus 216 ~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~-l~~mk~gailIN~sR 273 (342)
.+.....++++++++||+|++++|..... ..+. +. ...+ +|.++|+++-
T Consensus 76 ------~~~~~~~~~~e~~~~aDvVilavp~~~~~-~~~~-~i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 76 ------HPHVHLAAFADVAAGAELVVNATEGASSI-AALT-AAGAENL-AGKILVDIAN 125 (245)
T ss_dssp ------STTCEEEEHHHHHHHCSEEEECSCGGGHH-HHHH-HHCHHHH-TTSEEEECCC
T ss_pred ------cCceeccCHHHHHhcCCEEEEccCcHHHH-HHHH-Hhhhhhc-CCCEEEECCC
Confidence 01123468899999999999999955433 2222 22 2233 7999999993
No 71
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.15 E-value=1.1e-10 Score=116.09 Aligned_cols=125 Identities=15% Similarity=0.189 Sum_probs=95.6
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh---cCCEEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR---EADVIS 241 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~---~sDiV~ 241 (342)
.++|||||+|.||..+|+.| ...|.+|.+|||++.... .+.+ .+..........+++++++ .+|+|+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L-~~~G~~V~v~dr~~~~~~-~l~~--------~g~~g~~i~~~~s~~e~v~~l~~aDvVi 73 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNM-NDHGFVVCAFNRTVSKVD-DFLA--------NEAKGTKVVGAQSLKEMVSKLKKPRRII 73 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSTHHHH-HHHH--------TTTTTSSCEECSSHHHHHHTBCSSCEEE
T ss_pred CCEEEEEChhHHHHHHHHHH-HHCCCEEEEEeCCHHHHH-HHHh--------cccCCCceeccCCHHHHHhhccCCCEEE
Confidence 35799999999999999998 577999999999986532 2111 1111111222468999887 499999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCC
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~ 300 (342)
+++|..+.++.++ ++.+..|++|.++||++++...+...+.+.|.+..+.....-|.-
T Consensus 74 l~Vp~~~~v~~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 74 LLVKAGQAVDDFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp ECSCSSHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred EecCChHHHHHHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 9999877788777 677788999999999999999999999999988766544444443
No 72
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.13 E-value=1.8e-10 Score=111.85 Aligned_cols=233 Identities=16% Similarity=0.183 Sum_probs=128.7
Q ss_pred HHHHHHhCCCeEEEecCC--CCCCCHHHHHHHhc-------C-CccEEEecCCcCccHHHHHHhhccCCceEEEcccccC
Q 019328 29 WINLLIEQDCRVEICTQK--KTILSVEDIIALIG-------D-KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYN 98 (342)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~-~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~G~d 98 (342)
..+.|.+.|+++.+-... ...++.++..+.=+ + .+|+|+.- ..+ +++-++.++. |-.++...--.-|
T Consensus 47 ~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~~~~adiIlkV-k~p-~~~e~~~l~~-g~~l~~~lh~~~~ 123 (405)
T 4dio_A 47 SVKKLKSLGFDVVVEAGAGLGSRIPDQEYEKAGARVGTAADAKTADVILKV-RRP-SAQEISGYRS-GAVVIAIMDPYGN 123 (405)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEECGGGGGGCSEEEEE-ECC-CTTTGGGSCT-TCEEEEECCCTTC
T ss_pred HHHHHHhCCCEEEEeCCCCccCCCCHHHHHHcCCEEchHHhhccCCEEEEe-CCC-ChhHHhhcCC-CcEEEEEeccccC
Confidence 456777789988764432 23466666654211 0 25665531 112 2233344543 2133332222223
Q ss_pred ccChhHHHhCCceEEc---CCCCC-c------hhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccc-cccCCCE
Q 019328 99 NVDVNAANKYGIAVGN---TPGVL-T------ETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVG-NLLKGQT 167 (342)
Q Consensus 99 ~id~~~a~~~gI~v~n---~p~~~-~------~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g-~~l~gkt 167 (342)
.=-++++.++||...- .|... + .++||.+=. +-.......+ +. ..+....+ ..+.+.+
T Consensus 124 ~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAGy------~Av~~aa~~l--~~---~~~~l~t~~g~v~~~k 192 (405)
T 4dio_A 124 EEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAGY------QAVIDAAYEY--DR---ALPMMMTAAGTVPAAK 192 (405)
T ss_dssp HHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHHH------HHHHHHHHHC--SS---CSSCEEETTEEECCCE
T ss_pred HHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHHH------HHHHHHHHHh--Hh---hhchhhccCCCcCCCE
Confidence 3334677888988743 34221 1 123333221 1111111111 11 01111111 2578999
Q ss_pred EEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhh-hcc------CCCCCcccc----------ccCCH
Q 019328 168 VGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQF-LKA------NGEQPVTWK----------RASSM 230 (342)
Q Consensus 168 vGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~----------~~~~l 230 (342)
|+|+|+|.||..+|+.+ +++|++|++||+++..... ...++.. ... .+....++. ...++
T Consensus 193 V~ViG~G~iG~~aa~~a-~~lGa~V~v~D~~~~~l~~--~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l 269 (405)
T 4dio_A 193 IFVMGAGVAGLQAIATA-RRLGAVVSATDVRPAAKEQ--VASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV 269 (405)
T ss_dssp EEEECCSHHHHHHHHHH-HHTTCEEEEECSSTTHHHH--HHHTTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred EEEECCcHHHHHHHHHH-HHCCCEEEEEcCCHHHHHH--HHHcCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence 99999999999999996 7999999999999764211 1112210 000 000000000 02368
Q ss_pred HHHhhcCCEEEEcC--CCCcccccccCHhHHccCCCCcEEEecC--CCccCCH
Q 019328 231 DEVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDE 279 (342)
Q Consensus 231 ~ell~~sDiV~l~l--plt~~t~~li~~~~l~~mk~gailIN~s--RG~~vd~ 279 (342)
++++++||+|+.++ |.. .+.++++++.++.||||+++||+| +|+.++.
T Consensus 270 ~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~ 321 (405)
T 4dio_A 270 AEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNIEG 321 (405)
T ss_dssp HHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCccc
Confidence 89999999999874 533 467899999999999999999998 7776644
No 73
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.13 E-value=1.3e-10 Score=108.73 Aligned_cols=120 Identities=13% Similarity=0.157 Sum_probs=85.9
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
..++||||| +|.||+.+|+.| ...|.+|++||+++. .++++++++||+|++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l-~~~G~~V~~~~~~~~---------------------------~~~~~~~~~aDvVil 71 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYL-RASGYPISILDREDW---------------------------AVAESILANADVVIV 71 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHH-HTTTCCEEEECTTCG---------------------------GGHHHHHTTCSEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHH-HhCCCeEEEEECCcc---------------------------cCHHHHhcCCCEEEE
Confidence 357899999 999999999998 688999999998643 146678899999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCC--CCCCccCCCceEEcCC
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY--MKPGLSEMKNAIVVPH 320 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~--~~~~L~~~~nvi~TPH 320 (342)
|+|.. .+..++ ++....++++++++++++......+++.+.+ . .++....|. +..+++.-.++++|||
T Consensus 72 avp~~-~~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~---~-----~~~v~~hP~~g~~~~~~~g~~~~l~~~ 141 (298)
T 2pv7_A 72 SVPIN-LTLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEVH---T-----GAVLGLHPMFGADIASMAKQVVVRCDG 141 (298)
T ss_dssp CSCGG-GHHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHHC---S-----SEEEEEEECSCTTCSCCTTCEEEEEEE
T ss_pred eCCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHhc---C-----CCEEeeCCCCCCCchhhcCCeEEEecC
Confidence 99954 366655 3455679999999999876643344444432 1 133333443 2234666668999997
Q ss_pred C
Q 019328 321 I 321 (342)
Q Consensus 321 i 321 (342)
-
T Consensus 142 ~ 142 (298)
T 2pv7_A 142 R 142 (298)
T ss_dssp E
T ss_pred C
Confidence 5
No 74
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.12 E-value=1.5e-10 Score=107.13 Aligned_cols=184 Identities=15% Similarity=0.159 Sum_probs=114.3
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhcC----CccEEEecCCcCccHHHHHHhhccCCceEEEcccccCccChhHHH
Q 019328 31 NLLIEQDCRVEICTQKKTILSVEDIIALIGD----KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (342)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~G~d~id~~~a~ 106 (342)
..+++.|.+..+...+ .+++++.+.+.. +.+++.+.. +..++++..++.+ .-.++...++|.++.
T Consensus 33 ~~~~~~g~~~~y~~~~---~~~~~l~~~i~~l~~~~~~G~nvti--P~k~~i~~~ld~l--~~~A~~~gavnti~~---- 101 (275)
T 2hk9_A 33 ALIRYAGLNAVYLAFE---INPEELKKAFEGFKALKVKGINVTV--PFKEEIIPLLDYV--EDTAKEIGAVNTVKF---- 101 (275)
T ss_dssp HHHHHHTCSEEEEEEE---CCGGGHHHHHHHHHHHTCCEEEECT--TSTTTTGGGCSEE--CHHHHHHTCCCEEEE----
T ss_pred HHHHHcCCCcEEEEEE---CCHHHHHHHHHHHHhCCCCEEEECc--cCHHHHHHHHHHh--hHHHHHhCCcceEEe----
Confidence 4556667666544332 234555443321 366777653 4556666666554 445555566776653
Q ss_pred hCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccChHHHHHHHHHHh
Q 019328 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (342)
Q Consensus 107 ~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~IG~~vA~~l~~ 186 (342)
+.|- ..|+|++.. +++.++.| . +.++.|++++|||.|.+|+.+|+.| .
T Consensus 102 ~~g~----~~g~nTd~~-----G~~~~l~~----------~------------~~~~~~~~v~iiGaG~~g~aia~~L-~ 149 (275)
T 2hk9_A 102 ENGK----AYGYNTDWI-----GFLKSLKS----------L------------IPEVKEKSILVLGAGGASRAVIYAL-V 149 (275)
T ss_dssp ETTE----EEEECCHHH-----HHHHHHHH----------H------------CTTGGGSEEEEECCSHHHHHHHHHH-H
T ss_pred eCCE----EEeecCCHH-----HHHHHHHH----------h------------CCCcCCCEEEEECchHHHHHHHHHH-H
Confidence 2342 234455332 44444332 1 1357889999999999999999997 5
Q ss_pred cCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCc--ccccccCHhHHccCCC
Q 019328 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK--TTYHLINKERLATMKK 264 (342)
Q Consensus 187 a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~--~t~~li~~~~l~~mk~ 264 (342)
..|++|.+|||+.++. +.+.+.+ +.....+++++++++|+|++++|... ++...++ ++.+++
T Consensus 150 ~~g~~V~v~~r~~~~~-~~l~~~~------------g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~---~~~l~~ 213 (275)
T 2hk9_A 150 KEGAKVFLWNRTKEKA-IKLAQKF------------PLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFN---YDLIKK 213 (275)
T ss_dssp HHTCEEEEECSSHHHH-HHHTTTS------------CEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSC---GGGCCT
T ss_pred HcCCEEEEEECCHHHH-HHHHHHc------------CCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCC---HHHcCC
Confidence 7788999999987542 2111111 11223378888999999999999764 2223443 456899
Q ss_pred CcEEEecCC
Q 019328 265 EAILVNCSR 273 (342)
Q Consensus 265 gailIN~sR 273 (342)
|.++++++.
T Consensus 214 g~~viDv~~ 222 (275)
T 2hk9_A 214 DHVVVDIIY 222 (275)
T ss_dssp TSEEEESSS
T ss_pred CCEEEEcCC
Confidence 999999988
No 75
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.08 E-value=4.4e-10 Score=104.16 Aligned_cols=143 Identities=20% Similarity=0.147 Sum_probs=95.3
Q ss_pred CCEEEEEccChHHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~-a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
-++|||||+|.||+.+|+.|++ +.|.+|++||+++..... .. .. +.. .....++++++++||+|++|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~-~~-~~-------g~~---~~~~~~~~~~~~~aDvVila 73 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDI-AL-ER-------GIV---DEATADFKVFAALADVIILA 73 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHH-HH-HT-------TSC---SEEESCTTTTGGGCSEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHH-HH-Hc-------CCc---ccccCCHHHhhcCCCEEEEc
Confidence 3689999999999999998753 347899999998754221 11 11 110 01235777888999999999
Q ss_pred CCCCcccccccCHhHHcc-CCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEee---cCCC---CCCC-CCCccCCCce
Q 019328 244 PVLDKTTYHLINKERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD---VFED---EPYM-KPGLSEMKNA 315 (342)
Q Consensus 244 lplt~~t~~li~~~~l~~-mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalD---V~~~---EP~~-~~~L~~~~nv 315 (342)
+|... .+.++ .+.... ++++.++++++++.....+.+.+.+.+..+. .++ ++-. .|.. ..+++.-+++
T Consensus 74 vp~~~-~~~v~-~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~--~v~~~P~~g~~~~g~~~a~~~l~~g~~~ 149 (290)
T 3b1f_A 74 VPIKK-TIDFI-KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQ--FVGSHPMAGSHKSGAVAANVNLFENAYY 149 (290)
T ss_dssp SCHHH-HHHHH-HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCE--EEEEEEC-----CCTTSCCTTTTTTSEE
T ss_pred CCHHH-HHHHH-HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCE--EEEeCCcCCCCcchHHHhhHHHhCCCeE
Confidence 99433 34444 345566 8999999999988776668888888752221 122 2211 2322 2367787889
Q ss_pred EEcCCCCC
Q 019328 316 IVVPHIAS 323 (342)
Q Consensus 316 i~TPHia~ 323 (342)
+++||.++
T Consensus 150 ~~~~~~~~ 157 (290)
T 3b1f_A 150 IFSPSCLT 157 (290)
T ss_dssp EEEECTTC
T ss_pred EEecCCCC
Confidence 99999765
No 76
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.08 E-value=2.6e-11 Score=115.59 Aligned_cols=137 Identities=20% Similarity=0.186 Sum_probs=91.8
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
..+.+++|||||+|.||+.+|+.| +..|++|++|+++.....+. ... .+ .... ++++++++||+|
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L-~~~G~~V~~~~~~~~~~~~~-a~~-------~G-----~~~~-~~~e~~~~aDvV 76 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNL-KDSGVDVTVGLRSGSATVAK-AEA-------HG-----LKVA-DVKTAVAAADVV 76 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHH-HHTTCCEEEECCTTCHHHHH-HHH-------TT-----CEEE-CHHHHHHTCSEE
T ss_pred chhcCCEEEEECchHHHHHHHHHH-HHCcCEEEEEECChHHHHHH-HHH-------CC-----CEEc-cHHHHHhcCCEE
Confidence 468899999999999999999997 57899999999986542211 111 11 1122 788999999999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCC-C---CccC---CC
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-P---GLSE---MK 313 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~-~---~L~~---~~ 313 (342)
++|+|... ...++.++....|++|+++++++ | +.. ..+.+. ...++||+...|... . .++. -.
T Consensus 77 ilavp~~~-~~~v~~~~i~~~l~~~~ivi~~~-g--v~~--~~~~~~----~~~~~~vv~~~P~gp~~a~~~l~~~G~g~ 146 (338)
T 1np3_A 77 MILTPDEF-QGRLYKEEIEPNLKKGATLAFAH-G--FSI--HYNQVV----PRADLDVIMIAPKAPGHTVRSEFVKGGGI 146 (338)
T ss_dssp EECSCHHH-HHHHHHHHTGGGCCTTCEEEESC-C--HHH--HTTSSC----CCTTCEEEEEEESSCSHHHHHHHHTTCCC
T ss_pred EEeCCcHH-HHHHHHHHHHhhCCCCCEEEEcC-C--chh--HHHhhc----CCCCcEEEeccCCCCchhHHHHHhccCCC
Confidence 99999543 35555445667799999999874 2 222 111111 133456776667422 2 2444 56
Q ss_pred ceEEcCCCC
Q 019328 314 NAIVVPHIA 322 (342)
Q Consensus 314 nvi~TPHia 322 (342)
++++|||-.
T Consensus 147 ~~ii~~~~~ 155 (338)
T 1np3_A 147 PDLIAIYQD 155 (338)
T ss_dssp CEEEEEEEC
T ss_pred eEEEEecCC
Confidence 788999954
No 77
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.03 E-value=1.8e-10 Score=109.93 Aligned_cols=138 Identities=13% Similarity=0.107 Sum_probs=87.3
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc----CCEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE----ADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~----sDiV~ 241 (342)
++|||||+|.||+++|+.| +..|.+|++||+++...... ... + .....++++++++ ||+|+
T Consensus 9 ~kIgIIG~G~mG~slA~~L-~~~G~~V~~~dr~~~~~~~a--~~~-------G-----~~~~~~~~e~~~~a~~~aDlVi 73 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDL-HAANHSVFGYNRSRSGAKSA--VDE-------G-----FDVSADLEATLQRAAAEDALIV 73 (341)
T ss_dssp SCEEEECCSHHHHHHHHHH-HHTTCCEEEECSCHHHHHHH--HHT-------T-----CCEESCHHHHHHHHHHTTCEEE
T ss_pred CEEEEEeecHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH--HHc-------C-----CeeeCCHHHHHHhcccCCCEEE
Confidence 5799999999999999998 67899999999987643221 111 1 1224678888765 79999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCC-CCC---CCCccCCCceEE
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE-PYM---KPGLSEMKNAIV 317 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~E-P~~---~~~L~~~~nvi~ 317 (342)
+|+|. ..+..++ + .+..++++++++|++....--.+++.+.+...+..+. -=++-.| ..+ ...|+.-.++++
T Consensus 74 lavP~-~~~~~vl-~-~l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~~~~~v~~-HPmaG~e~sG~~aa~~~Lf~g~~~il 149 (341)
T 3ktd_A 74 LAVPM-TAIDSLL-D-AVHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYVGS-HPMAGTANSGWSASMDGLFKRAVWVV 149 (341)
T ss_dssp ECSCH-HHHHHHH-H-HHHHHCTTCCEEECCSCSHHHHHHHHHTTCGGGEECE-EECCSCC-CCGGGCCSSTTTTCEEEE
T ss_pred EeCCH-HHHHHHH-H-HHHccCCCCEEEEcCCCChHHHHHHHHhCCCCcEecC-CccccccccchhhhhhHHhcCCeEEE
Confidence 99994 4566665 2 3444589999999987653222333333321111110 1122222 111 235888888999
Q ss_pred cCCCC
Q 019328 318 VPHIA 322 (342)
Q Consensus 318 TPHia 322 (342)
||+-.
T Consensus 150 tp~~~ 154 (341)
T 3ktd_A 150 TFDQL 154 (341)
T ss_dssp CCGGG
T ss_pred EeCCC
Confidence 99854
No 78
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.02 E-value=3.9e-10 Score=104.76 Aligned_cols=110 Identities=17% Similarity=0.184 Sum_probs=85.9
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
.+|||||+|.||+.+|+.| ...|.+|.+||+++.... .+. .. +.....+++++++.+|+|++|+|
T Consensus 6 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~~-~~~--------~~-----g~~~~~~~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNL-LKAGYSLVVSDRNPEAIA-DVI--------AA-----GAETASTAKAIAEQCDVIITMLP 70 (299)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSCHHHHH-HHH--------HT-----TCEECSSHHHHHHHCSEEEECCS
T ss_pred ceEEEECchHHHHHHHHHH-HhCCCEEEEEeCCHHHHH-HHH--------HC-----CCeecCCHHHHHhCCCEEEEECC
Confidence 4899999999999999998 567999999999875421 111 11 12234688999999999999999
Q ss_pred CCcccccccC--HhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCC
Q 019328 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 246 lt~~t~~li~--~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~ 290 (342)
.+..++.++. ++....+++|.++|+++.|...+.+.|.+.+.+..
T Consensus 71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g 117 (299)
T 1vpd_A 71 NSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKG 117 (299)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 7666676663 34567789999999999998877888999987643
No 79
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.01 E-value=4.2e-10 Score=104.70 Aligned_cols=109 Identities=17% Similarity=0.200 Sum_probs=85.7
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
++|||||+|.||+.+|+.| ...|.+|.+||+++.... .+. .. +.....+++++++.+|+|++|+|
T Consensus 5 ~~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~~-~~~--------~~-----g~~~~~~~~~~~~~~D~vi~~vp 69 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINL-LKEGVTVYAFDLMEANVA-AVV--------AQ-----GAQACENNQKVAAASDIIFTSLP 69 (301)
T ss_dssp CEEEEECCCTTHHHHHHHH-HHTTCEEEEECSSHHHHH-HHH--------TT-----TCEECSSHHHHHHHCSEEEECCS
T ss_pred CEEEEECccHHHHHHHHHH-HHCCCeEEEEeCCHHHHH-HHH--------HC-----CCeecCCHHHHHhCCCEEEEECC
Confidence 5899999999999999998 467999999999875421 111 11 12234688999999999999999
Q ss_pred CCcccccccC--HhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 246 lt~~t~~li~--~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
....++.++. ++....+++|.++|++++|...+.+.|.+.+.+.
T Consensus 70 ~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 70 NAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp SHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 7766777764 3566778999999999999877788898888764
No 80
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.00 E-value=8.1e-10 Score=110.04 Aligned_cols=118 Identities=14% Similarity=0.148 Sum_probs=90.0
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc---CC
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---AD 238 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---sD 238 (342)
....++|||||+|.||+.+|+.| ...|.+|.+|||+++.. +.+.+.. . ..+.....+++++++. +|
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~L-a~~G~~V~v~~r~~~~~-~~l~~~~-------~--~~gi~~~~s~~e~v~~l~~aD 80 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNI-ESRGYTVSIFNRSREKT-EEVIAEN-------P--GKKLVPYYTVKEFVESLETPR 80 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHH-HTTTCCEEEECSSHHHH-HHHHHHS-------T--TSCEEECSSHHHHHHTBCSSC
T ss_pred ccCCCeEEEEccHHHHHHHHHHH-HhCCCeEEEEeCCHHHH-HHHHhhC-------C--CCCeEEeCCHHHHHhCCCCCC
Confidence 45667899999999999999998 46799999999987643 2221110 0 0122334689999887 99
Q ss_pred EEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCc
Q 019328 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 239 iV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i 291 (342)
+|++++|.+..++.++ ++....+++|.++||++.|...+...+.+.+.+..+
T Consensus 81 vVil~Vp~~~~v~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~ 132 (480)
T 2zyd_A 81 RILLMVKAGAGTDAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGF 132 (480)
T ss_dssp EEEECSCSSSHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCCHHHHHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCC
Confidence 9999999877788877 466778999999999999998888889998987544
No 81
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.98 E-value=5.5e-10 Score=103.61 Aligned_cols=108 Identities=22% Similarity=0.262 Sum_probs=82.1
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
++|||||+|.||+.+|+.| ...|.+|++|||++.... .+. .. +.....+++++++.+|+|++|+|
T Consensus 1 m~i~iiG~G~mG~~~a~~l-~~~g~~V~~~~~~~~~~~-~~~--------~~-----g~~~~~~~~~~~~~~Dvvi~~vp 65 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNL-MKHGYPLIIYDVFPDACK-EFQ--------DA-----GEQVVSSPADVAEKADRIITMLP 65 (296)
T ss_dssp CCEEEECCSTTHHHHHHHH-HHTTCCEEEECSSTHHHH-HHH--------TT-----TCEECSSHHHHHHHCSEEEECCS
T ss_pred CeEEEEeccHHHHHHHHHH-HHCCCEEEEEeCCHHHHH-HHH--------Hc-----CCeecCCHHHHHhcCCEEEEeCC
Confidence 3699999999999999998 577999999999875421 111 11 12234688999999999999999
Q ss_pred CCcccccccCH--hHHccCCCCcEEEecCCCccCCHHHHHHHHHc
Q 019328 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 246 lt~~t~~li~~--~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~ 288 (342)
....++.++.. ..+..+++|.++|+++...+-+.+.+.+.+.+
T Consensus 66 ~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 66 TSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp SHHHHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 77777776643 25567899999999888777666777777765
No 82
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.98 E-value=1.1e-09 Score=102.24 Aligned_cols=149 Identities=17% Similarity=0.140 Sum_probs=94.4
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
.-+.|+|||||+|.||..+|+.+ . .|.+|++||+++...... .+. +.... ..+.....++++ +++||+|+
T Consensus 9 ~~~~~~V~vIG~G~MG~~iA~~l-a-aG~~V~v~d~~~~~~~~~-~~~----l~~~~--~~~i~~~~~~~~-~~~aDlVi 78 (293)
T 1zej_A 9 HHHHMKVFVIGAGLMGRGIAIAI-A-SKHEVVLQDVSEKALEAA-REQ----IPEEL--LSKIEFTTTLEK-VKDCDIVM 78 (293)
T ss_dssp ---CCEEEEECCSHHHHHHHHHH-H-TTSEEEEECSCHHHHHHH-HHH----SCGGG--GGGEEEESSCTT-GGGCSEEE
T ss_pred ccCCCeEEEEeeCHHHHHHHHHH-H-cCCEEEEEECCHHHHHHH-HHH----HHHHH--hCCeEEeCCHHH-HcCCCEEE
Confidence 35679999999999999999998 5 799999999997653221 111 00000 001222356766 79999999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEE-ecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCceEEcCC
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILV-NCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPH 320 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailI-N~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi~TPH 320 (342)
.++|.+.+.+..+-.+ ++.+ |+++++ |+|.-+ ...+.+++. ......++..|. |. ...+-+.++|+
T Consensus 79 eavpe~~~vk~~l~~~-l~~~-~~~IlasntSti~---~~~~a~~~~-~~~r~~G~Hf~~--Pv-----~~~~lveiv~g 145 (293)
T 1zej_A 79 EAVFEDLNTKVEVLRE-VERL-TNAPLCSNTSVIS---VDDIAERLD-SPSRFLGVHWMN--PP-----HVMPLVEIVIS 145 (293)
T ss_dssp ECCCSCHHHHHHHHHH-HHTT-CCSCEEECCSSSC---HHHHHTTSS-CGGGEEEEEECS--ST-----TTCCEEEEEEC
T ss_pred EcCcCCHHHHHHHHHH-HhcC-CCCEEEEECCCcC---HHHHHHHhh-cccceEeEEecC--cc-----ccCCEEEEECC
Confidence 9999888877766544 5667 999984 887754 345555443 234566677666 43 23455667765
Q ss_pred CCCCcHHHHHHHHH
Q 019328 321 IASASKWTREGMAT 334 (342)
Q Consensus 321 ia~~t~~~~~~~~~ 334 (342)
-. .+.++.+++..
T Consensus 146 ~~-t~~~~~~~~~~ 158 (293)
T 1zej_A 146 RF-TDSKTVAFVEG 158 (293)
T ss_dssp TT-CCHHHHHHHHH
T ss_pred CC-CCHHHHHHHHH
Confidence 32 24455544433
No 83
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.96 E-value=4.5e-09 Score=103.76 Aligned_cols=194 Identities=16% Similarity=0.101 Sum_probs=115.6
Q ss_pred CCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcc-----cccccCCCEEEEEccChHHHHHHHHHHhcCC
Q 019328 115 TPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLF-----VGNLLKGQTVGVIGAGRIGSAYARMMVEGFK 189 (342)
Q Consensus 115 ~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~-----~g~~l~gktvGIiG~G~IG~~vA~~l~~a~g 189 (342)
..|-|-..|.|.+.+++|...|. .++|. .... ....-.=++|||||.|.||..+|..++ ..|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~---------~~~w~---~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la-~aG 77 (460)
T 3k6j_A 11 STGENLYFQGSEVRSYLMEAHSL---------AGQWS---LPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFG-LAG 77 (460)
T ss_dssp TTSGGGGGCBCHHHHHHHHTTCC---------TTSCB---CSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHH-HTT
T ss_pred ccccchhhhhHHHHHHHHhHHHh---------hcccc---CCCCccccccCCcccCCEEEEECCCHHHHHHHHHHH-HCC
Confidence 34556777788888888773322 23352 1100 001122378999999999999999985 679
Q ss_pred cEEEEEcCChhhHHHHHHhhhhhhhccCCCCC--------ccccccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHcc
Q 019328 190 MNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--------VTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (342)
Q Consensus 190 ~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~ 261 (342)
.+|++||+++++........+.... ..+... .......+++ .+++||+|+.++|.+.+.+.-+-++..+.
T Consensus 78 ~~V~l~D~~~e~a~~~i~~~l~~~~-~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~ 155 (460)
T 3k6j_A 78 IETFLVVRNEQRCKQELEVMYAREK-SFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENI 155 (460)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHHH-HTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTT
T ss_pred CeEEEEECcHHHHHHHHHHHHHHHH-HcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence 9999999997632111000000001 111100 0011235675 68999999999998777776666777788
Q ss_pred CCCCcEEE-ecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCceEEcCCCCCCcHHHHHHHHHH
Q 019328 262 MKKEAILV-NCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATL 335 (342)
Q Consensus 262 mk~gailI-N~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi~TPHia~~t~~~~~~~~~~ 335 (342)
++++++|+ |+|. +....+.+++.. .-...++..|. |.. .++-|.++|+- ..+.++.+.+...
T Consensus 156 ~~~~aIlasnTSs---l~i~~ia~~~~~-p~r~iG~Hffn--Pv~-----~m~LvEIv~g~-~Ts~e~~~~~~~l 218 (460)
T 3k6j_A 156 CKSTCIFGTNTSS---LDLNEISSVLRD-PSNLVGIHFFN--PAN-----VIRLVEIIYGS-HTSSQAIATAFQA 218 (460)
T ss_dssp SCTTCEEEECCSS---SCHHHHHTTSSS-GGGEEEEECCS--STT-----TCCEEEEECCS-SCCHHHHHHHHHH
T ss_pred CCCCCEEEecCCC---hhHHHHHHhccC-CcceEEEEecc--hhh-----hCCEEEEEeCC-CCCHHHHHHHHHH
Confidence 99999996 5554 444666666543 34567777777 432 23345566653 2244555544443
No 84
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.95 E-value=2.5e-09 Score=102.74 Aligned_cols=108 Identities=17% Similarity=0.234 Sum_probs=82.9
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-cCCEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~sDiV 240 (342)
+|.||||+|+|+|+||+.+|+.| ..+|++|+++|+++.. ..++.+.++ . ...+.++++. .||++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L-~~~GakVvv~D~~~~~-l~~~a~~~g------------a-~~v~~~~ll~~~~DIv 234 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKL-NTEGAKLVVTDVNKAA-VSAAVAEEG------------A-DAVAPNAIYGVTCDIF 234 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHH-HHHHHHHHC------------C-EECCGGGTTTCCCSEE
T ss_pred CCCcCEEEEECchHHHHHHHHHH-HHCCCEEEEEcCCHHH-HHHHHHHcC------------C-EEEChHHHhccCCcEe
Confidence 79999999999999999999997 7999999999998653 222222221 1 1235566666 89999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCc
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i 291 (342)
+.|. +.++|+.+.++.|+ ..++++.+++++.+++ ..+.|+++.+
T Consensus 235 ip~a-----~~~~I~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi 278 (364)
T 1leh_A 235 APCA-----LGAVLNDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGI 278 (364)
T ss_dssp EECS-----CSCCBSTTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTC
T ss_pred eccc-----hHHHhCHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCC
Confidence 9873 67789988899995 5689999999998866 5566776655
No 85
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.95 E-value=5e-10 Score=103.76 Aligned_cols=108 Identities=15% Similarity=0.117 Sum_probs=83.3
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
++|||||+|.||+.+|+.| ...|.+|.+|| ++... +.+. .. +.....+++++++++|+|++|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~-~~~~~-~~~~--------~~-----g~~~~~~~~~~~~~~D~vi~~vp 67 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINL-ARAGHQLHVTT-IGPVA-DELL--------SL-----GAVNVETARQVTEFADIIFIMVP 67 (295)
T ss_dssp CEEEECCCSTTHHHHHHHH-HHTTCEEEECC-SSCCC-HHHH--------TT-----TCBCCSSHHHHHHTCSEEEECCS
T ss_pred CEEEEEccCHHHHHHHHHH-HhCCCEEEEEc-CHHHH-HHHH--------Hc-----CCcccCCHHHHHhcCCEEEEECC
Confidence 4899999999999999998 46799999999 65432 1111 11 12234688999999999999999
Q ss_pred CCcccccccCH--hHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 246 lt~~t~~li~~--~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
...+++.++.. +....+++|.++|++++|...+.+.|.+.+.+.
T Consensus 68 ~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 68 DTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp SHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 76666666542 455678999999999999888888999998863
No 86
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.93 E-value=6e-09 Score=95.84 Aligned_cols=149 Identities=13% Similarity=0.057 Sum_probs=94.3
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
++|||||+|.||+.+|+.| ...|.+|++||+++..... .. .+ +.. .....+++++ +++|+|++++|
T Consensus 1 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~~~-~~-~~-------g~~---~~~~~~~~~~-~~~D~vi~av~ 66 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDL-RRRGHYLIGVSRQQSTCEK-AV-ER-------QLV---DEAGQDLSLL-QTAKIIFLCTP 66 (279)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHH-HH-HT-------TSC---SEEESCGGGG-TTCSEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHH-HHCCCEEEEEECCHHHHHH-HH-hC-------CCC---ccccCCHHHh-CCCCEEEEECC
Confidence 3799999999999999997 5778999999998754321 11 11 111 0123578888 99999999999
Q ss_pred CCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCC---CCC-CCCccCCCceEEcCCC
Q 019328 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE---PYM-KPGLSEMKNAIVVPHI 321 (342)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~E---P~~-~~~L~~~~nvi~TPHi 321 (342)
. ..+..++ ++....+++++++|+++.......+.+.+.+. ++.+. .-++-.+ |.. ...++.-+.++++|+-
T Consensus 67 ~-~~~~~~~-~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~~-~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~ 141 (279)
T 2f1k_A 67 I-QLILPTL-EKLIPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIGG-HPMAGTAAQGIDGAEENLFVNAPYVLTPTE 141 (279)
T ss_dssp H-HHHHHHH-HHHGGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEEE-EECCCCSCSSGGGCCTTTTTTCEEEEEECT
T ss_pred H-HHHHHHH-HHHHhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEeec-CcccCCccCCHHHHhHHHhCCCcEEEecCC
Confidence 3 3445544 34556789999999997766555555555443 22222 1233111 211 1246666778999975
Q ss_pred CCCcHHHHHHHHH
Q 019328 322 ASASKWTREGMAT 334 (342)
Q Consensus 322 a~~t~~~~~~~~~ 334 (342)
++ +.+..+.+..
T Consensus 142 ~~-~~~~~~~v~~ 153 (279)
T 2f1k_A 142 YT-DPEQLACLRS 153 (279)
T ss_dssp TC-CHHHHHHHHH
T ss_pred CC-CHHHHHHHHH
Confidence 43 4455444433
No 87
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.93 E-value=1.4e-09 Score=102.06 Aligned_cols=110 Identities=14% Similarity=0.134 Sum_probs=84.1
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
++|||||+|.||+.+|+.| ...|.+|.+||+++.... .+.+ . +.....+++++++++|+|++|+|
T Consensus 31 ~~I~iIG~G~mG~~~a~~l-~~~g~~V~~~~~~~~~~~-~~~~--------~-----g~~~~~~~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNL-LKMGHTVTVWNRTAEKCD-LFIQ--------E-----GARLGRTPAEVVSTCDITFACVS 95 (316)
T ss_dssp SCEEEECCSHHHHHHHHHH-HHTTCCEEEECSSGGGGH-HHHH--------T-----TCEECSCHHHHHHHCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHH-HhCCCEEEEEeCCHHHHH-HHHH--------c-----CCEEcCCHHHHHhcCCEEEEeCC
Confidence 6899999999999999998 467899999999876421 1110 1 11234578899999999999999
Q ss_pred CCcccccccCH--hHHccCCCCcEEEecCCCccCCHHHHHHHHHcCC
Q 019328 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 246 lt~~t~~li~~--~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~ 290 (342)
....++.++.. ..+..++++.++|+++++.....+.+.+.+....
T Consensus 96 ~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~ 142 (316)
T 2uyy_A 96 DPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRG 142 (316)
T ss_dssp SHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 76666665543 2456789999999999988777788888886543
No 88
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.93 E-value=2.2e-09 Score=107.30 Aligned_cols=116 Identities=16% Similarity=0.209 Sum_probs=89.2
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc---CCEEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVIS 241 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---sDiV~ 241 (342)
.++|||||+|.||+.+|+.|+ ..|.+|.+|||++.+.. .+.+. ... ..+.....+++++++. ||+|+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La-~~G~~V~v~dr~~~~~~-~l~~~------~~~--~~gi~~~~s~~e~v~~l~~aDvVi 79 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAA-DHGFTVCAYNRTQSKVD-HFLAN------EAK--GKSIIGATSIEDFISKLKRPRKVM 79 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSHHHH-HHHHT------TTT--TSSEECCSSHHHHHHTSCSSCEEE
T ss_pred CCCEEEEeeHHHHHHHHHHHH-HCCCEEEEEeCCHHHHH-HHHcc------ccc--CCCeEEeCCHHHHHhcCCCCCEEE
Confidence 458999999999999999984 67899999999976532 22110 000 0122335689998887 99999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCc
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i 291 (342)
+++|....++.++ ++....+++|.++|+++.+...+...+.+.+.+..+
T Consensus 80 l~Vp~~~~v~~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~ 128 (497)
T 2p4q_A 80 LLVKAGAPVDALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGI 128 (497)
T ss_dssp ECCCSSHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred EEcCChHHHHHHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCC
Confidence 9999777788877 566778999999999999998888889998887443
No 89
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.93 E-value=9.1e-10 Score=101.58 Aligned_cols=106 Identities=18% Similarity=0.215 Sum_probs=81.5
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
++|||||+|.||+.+|+.| .. |.+|.+||+++.... ...+. + ..... ++++++.+|+|++|+|
T Consensus 2 ~~i~iiG~G~~G~~~a~~l-~~-g~~V~~~~~~~~~~~-~~~~~--------g-----~~~~~-~~~~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHL-AR-RFPTLVWNRTFEKAL-RHQEE--------F-----GSEAV-PLERVAEARVIFTCLP 64 (289)
T ss_dssp CCEEEECCSTTHHHHHHHH-HT-TSCEEEECSSTHHHH-HHHHH--------H-----CCEEC-CGGGGGGCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHH-hC-CCeEEEEeCCHHHHH-HHHHC--------C-----CcccC-HHHHHhCCCEEEEeCC
Confidence 4799999999999999998 46 999999999875422 11110 1 11122 6678889999999999
Q ss_pred CCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
....++.++ ++....+++|.++|+++.+...+.+.|.+.+.+.
T Consensus 65 ~~~~~~~v~-~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 107 (289)
T 2cvz_A 65 TTREVYEVA-EALYPYLREGTYWVDATSGEPEASRRLAERLREK 107 (289)
T ss_dssp SHHHHHHHH-HHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred ChHHHHHHH-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 665566655 4556778999999999999888888999998874
No 90
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.90 E-value=5e-09 Score=103.94 Aligned_cols=147 Identities=14% Similarity=0.198 Sum_probs=94.8
Q ss_pred CEEEEEccChHHHHHHHHHHhc-CCcEEEEEcCChhhHHHHHHhhh--------hhhhccCCCCCccccccCCHHHHhhc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAY--------GQFLKANGEQPVTWKRASSMDEVLRE 236 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a-~g~~V~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (342)
++|||||+|.||..+|..|++. .|.+|++||++++... ....+. ...+... ...+.....++++.++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~-~l~~g~~~i~e~~l~~~~~~~--~~~~~~~t~~~~e~~~~ 82 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRIN-AWNSPTLPIYEPGLKEVVESC--RGKNLFFSTNIDDAIKE 82 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHH-HHTSSSCSSCCTTHHHHHHHH--BTTTEEEESCHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHH-HHhCCCCCcCCCCHHHHHHHh--hcCCEEEECCHHHHHhc
Confidence 5899999999999999998532 2899999999876421 110000 0000000 00012234678889999
Q ss_pred CCEEEEcCCCCccccccc-------------CHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEee---cCC
Q 019328 237 ADVISLHPVLDKTTYHLI-------------NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD---VFE 300 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li-------------~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalD---V~~ 300 (342)
||+|++|+|...+..+.+ -++....|++|+++|++|+..+-..+.+.+.+.+.... .+| ++.
T Consensus 83 aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~--~~d~~V~~~ 160 (467)
T 2q3e_A 83 ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKP--NLNLQVLSN 160 (467)
T ss_dssp CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCT--TCEEEEEEC
T ss_pred CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCC--CCCeEEEeC
Confidence 999999999554433321 13355678999999999998888888899888875422 233 355
Q ss_pred CCCCCC-C---CccCCCceEE
Q 019328 301 DEPYMK-P---GLSEMKNAIV 317 (342)
Q Consensus 301 ~EP~~~-~---~L~~~~nvi~ 317 (342)
+|+..+ . .+...+++++
T Consensus 161 Pe~~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 161 PEFLAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCCCCTTSHHHHHHSCSCEEE
T ss_pred HHHhhcccchhhccCCCEEEE
Confidence 665433 2 3556677764
No 91
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.41 E-value=1.8e-10 Score=101.79 Aligned_cols=94 Identities=18% Similarity=0.201 Sum_probs=72.3
Q ss_pred cCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 163 l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
+.+++|||||+|.||+.+|+.| ...|++|++|||+... +.+. . .+.. ..+++++++++|+|++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L-~~~G~~V~~~~r~~~~--~~~~--------~-----~g~~-~~~~~~~~~~aDvVil 79 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKM-LQCGYSVVFGSRNPQV--SSLL--------P-----RGAE-VLCYSEAASRSDVIVL 79 (201)
Confidence 7788999999999999999997 5789999999987641 1110 0 1111 2377888999999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCCccC
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI 277 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~v 277 (342)
++|.. +++.++ .+..+++++++||+++|-..
T Consensus 80 av~~~-~~~~v~---~l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 80 AVHRE-HYDFLA---ELADSLKGRVLIDVSNNQKM 110 (201)
Confidence 99964 577766 25567789999999999864
No 92
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.88 E-value=3.7e-09 Score=105.11 Aligned_cols=115 Identities=16% Similarity=0.153 Sum_probs=87.7
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc---CCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---sDiV~l 242 (342)
++|||||+|.||+.+|+.|+ ..|.+|.+|||+++.. +.+.+.+. ..+.....+++++++. +|+|++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~-~~G~~V~v~dr~~~~~-~~l~~~~~---------~~gi~~~~s~~e~v~~l~~aDvVil 74 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVE-SRGYTVAIYNRTTSKT-EEVFKEHQ---------DKNLVFTKTLEEFVGSLEKPRRIML 74 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSHHHH-HHHHHHTT---------TSCEEECSSHHHHHHTBCSSCEEEE
T ss_pred CcEEEEeeHHHHHHHHHHHH-hCCCEEEEEcCCHHHH-HHHHHhCc---------CCCeEEeCCHHHHHhhccCCCEEEE
Confidence 57999999999999999984 6789999999987642 22221110 0112335689998876 999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
++|....+..++ ++....+++|.++|+++.|...+...+.+.+.+..+.
T Consensus 75 avp~~~~v~~vl-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~ 123 (474)
T 2iz1_A 75 MVQAGAATDATI-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGIN 123 (474)
T ss_dssp CCCTTHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCE
T ss_pred EccCchHHHHHH-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCe
Confidence 999777777776 4566789999999999999888888898888765443
No 93
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.87 E-value=1.2e-08 Score=96.45 Aligned_cols=156 Identities=14% Similarity=0.114 Sum_probs=97.1
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhh---hccCCCCC---------ccccccCCHHH
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQF---LKANGEQP---------VTWKRASSMDE 232 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~---------~~~~~~~~l~e 232 (342)
-++|||||.|.||..+|..++ ..|.+|++||+++...... ....... +...+... .......++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la-~~G~~V~l~d~~~~~~~~~-~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQITGA-LENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHH-HHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CceEEEEeeCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHH-HHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 368999999999999999985 6699999999997643221 1100000 00111000 00123468999
Q ss_pred HhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCC
Q 019328 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEM 312 (342)
Q Consensus 233 ll~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~ 312 (342)
++++||+|+.++|...+.+.-+-++..+.+++++++++.+.+ +....+.+.+.. +-...+..-|. |+. ..
T Consensus 84 av~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~--P~~-----~~ 153 (319)
T 2dpo_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN--PPY-----YI 153 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS--STT-----TC
T ss_pred HHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC--chh-----hc
Confidence 999999999999977776665556777889999999865554 445667766643 23444555444 321 23
Q ss_pred CceEEcCCCCCCcHHHHHHHH
Q 019328 313 KNAIVVPHIASASKWTREGMA 333 (342)
Q Consensus 313 ~nvi~TPHia~~t~~~~~~~~ 333 (342)
+-+.++|+-. .+.++.+++.
T Consensus 154 ~lveiv~g~~-t~~e~~~~~~ 173 (319)
T 2dpo_A 154 PLVELVPHPE-TSPATVDRTH 173 (319)
T ss_dssp CEEEEEECTT-CCHHHHHHHH
T ss_pred ceEEEeCCCC-CCHHHHHHHH
Confidence 4466777532 2344444443
No 94
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.84 E-value=4.5e-09 Score=104.73 Aligned_cols=116 Identities=13% Similarity=0.204 Sum_probs=87.0
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh---cCCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR---EADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~---~sDiV~l 242 (342)
++|||||+|.||+.+|+.|+ ..|.+|.+|||++... +.+... . . .+.+.....+++++++ .+|+|++
T Consensus 3 m~IgvIG~G~mG~~lA~~La-~~G~~V~v~dr~~~~~-~~l~~~------~-~-~g~gi~~~~~~~e~v~~l~~aDvVil 72 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMN-DHGFVVCAFNRTVSKV-DDFLAN------E-A-KGTKVLGAHSLEEMVSKLKKPRRIIL 72 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSTHHH-HHHHHT------T-T-TTSSCEECSSHHHHHHHBCSSCEEEE
T ss_pred CeEEEEChHHHHHHHHHHHH-HCCCeEEEEeCCHHHH-HHHHhc------c-c-cCCCeEEeCCHHHHHhhccCCCEEEE
Confidence 47999999999999999984 6789999999987643 221110 0 0 0011223468888875 8999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
++|....++.++ .+....+++|.++|+++.|...+...+.+.+.+..+.
T Consensus 73 aVp~~~~v~~vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~ 121 (482)
T 2pgd_A 73 LVKAGQAVDNFI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGIL 121 (482)
T ss_dssp CSCTTHHHHHHH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred eCCChHHHHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 999776777776 3566779999999999999888888888888775443
No 95
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.83 E-value=1.7e-08 Score=83.75 Aligned_cols=93 Identities=13% Similarity=0.250 Sum_probs=70.1
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
|++++|||.|.||+.+++.| ...|++|.++||++... +.+.+.++ .......+++++++++|+|+.++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l-~~~g~~v~v~~r~~~~~-~~~a~~~~----------~~~~~~~~~~~~~~~~Divi~at 88 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYF-SYPQYKVTVAGRNIDHV-RAFAEKYE----------YEYVLINDIDSLIKNNDVIITAT 88 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGC-CTTTCEEEEEESCHHHH-HHHHHHHT----------CEEEECSCHHHHHHTCSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEEcCCHHHH-HHHHHHhC----------CceEeecCHHHHhcCCCEEEEeC
Confidence 88999999999999999997 67899999999987643 22222221 11123468899999999999999
Q ss_pred CCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 245 VLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
|.+ ..++.. +.+++|.+++|++...
T Consensus 89 ~~~---~~~~~~---~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 89 SSK---TPIVEE---RSLMPGKLFIDLGNPP 113 (144)
T ss_dssp CCS---SCSBCG---GGCCTTCEEEECCSSC
T ss_pred CCC---CcEeeH---HHcCCCCEEEEccCCc
Confidence 965 334444 4568899999998754
No 96
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.83 E-value=1.1e-08 Score=101.79 Aligned_cols=119 Identities=17% Similarity=0.184 Sum_probs=87.7
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc---CCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---sDiV~l 242 (342)
++|||||+|.||+.+|+.|+ ..|.+|.+|||++... +.+.+.++.. . .+.......+++++++. +|+|++
T Consensus 2 MkIgVIG~G~mG~~lA~~La-~~G~~V~v~dr~~~~~-~~l~~~~g~~--~---~~~~i~~~~~~~e~v~~l~~aDvVil 74 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIA-EKGFKVAVFNRTYSKS-EEFMKANASA--P---FAGNLKAFETMEAFAASLKKPRKALI 74 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSHHHH-HHHHHHTTTS--T---TGGGEEECSCHHHHHHHBCSSCEEEE
T ss_pred CEEEEEChHHHHHHHHHHHH-HCCCEEEEEeCCHHHH-HHHHHhcCCC--C---CCCCeEEECCHHHHHhcccCCCEEEE
Confidence 36999999999999999984 6789999999987542 2222211100 0 00112335688898874 999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
++|....++.++ ++....+++|.++|+++.|...+...+.+.+.+..+.
T Consensus 75 aVp~~~~v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~ 123 (478)
T 1pgj_A 75 LVQAGAATDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLR 123 (478)
T ss_dssp CCCCSHHHHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCE
T ss_pred ecCChHHHHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCe
Confidence 999776777766 4566778999999999999888888899998875444
No 97
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.80 E-value=5.5e-09 Score=95.31 Aligned_cols=103 Identities=14% Similarity=0.091 Sum_probs=76.2
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcC--ChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDL--YQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
++|||||+|.||+.+|+.| ...|.+|++||+ ++.. .+.... .+ .. .++++++++||+|++|
T Consensus 1 M~I~iIG~G~mG~~la~~l-~~~g~~V~~~~~~~~~~~-~~~~~~--------~g-----~~--~~~~~~~~~aDvvi~~ 63 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRL-RSRGVEVVTSLEGRSPST-IERART--------VG-----VT--ETSEEDVYSCPVVISA 63 (264)
T ss_dssp CEEEEESCSHHHHHHHHHH-HHTTCEEEECCTTCCHHH-HHHHHH--------HT-----CE--ECCHHHHHTSSEEEEC
T ss_pred CeEEEEechHHHHHHHHHH-HHCCCeEEEeCCccCHHH-HHHHHH--------CC-----Cc--CCHHHHHhcCCEEEEE
Confidence 3799999999999999998 467899999988 3322 111110 01 11 4678889999999999
Q ss_pred CCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 244 lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
+|.....+.+ .+....+++ ++|+++.+...+.+.+.+.+.+.
T Consensus 64 v~~~~~~~~~--~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 64 VTPGVALGAA--RRAGRHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp SCGGGHHHHH--HHHHTTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred CCCHHHHHHH--HHHHHhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 9966555554 456677877 99999988877778888888653
No 98
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.79 E-value=4e-09 Score=103.88 Aligned_cols=102 Identities=20% Similarity=0.196 Sum_probs=70.5
Q ss_pred cccCC-CEEEEEccChHHHHHHHHHHhcC------CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHH
Q 019328 161 NLLKG-QTVGVIGAGRIGSAYARMMVEGF------KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV 233 (342)
Q Consensus 161 ~~l~g-ktvGIiG~G~IG~~vA~~l~~a~------g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el 233 (342)
..|.| |||||||+|.||+++|+.| +.. |++|++.++......+. .... +.... .....+++++
T Consensus 49 ~~L~GiKkIgIIGlGsMG~AmA~nL-r~s~~~~g~G~~ViVg~r~~sks~e~-A~e~-------G~~v~-d~ta~s~aEA 118 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGSQGPAQAQNL-RDSLAEAKSDIVVKIGLRKGSKSFDE-ARAA-------GFTEE-SGTLGDIWET 118 (525)
T ss_dssp HHTTTCSEEEEECCTTHHHHHHHHH-HHHHHHTTCCCEEEEEECTTCSCHHH-HHHT-------TCCTT-TTCEEEHHHH
T ss_pred HHhcCCCEEEEEeEhHHHHHHHHHH-HhcccccCCCCEEEEEeCCchhhHHH-HHHC-------CCEEe-cCCCCCHHHH
Confidence 57999 9999999999999999998 455 99988665543211111 0011 11100 0012478999
Q ss_pred hhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 234 l~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
+++||+|++++|..... .++. +.+..||+|++ |-.+-|-
T Consensus 119 a~~ADVVILaVP~~~~~-eVl~-eI~p~LK~GaI-Ls~AaGf 157 (525)
T 3fr7_A 119 VSGSDLVLLLISDAAQA-DNYE-KIFSHMKPNSI-LGLSHGF 157 (525)
T ss_dssp HHHCSEEEECSCHHHHH-HHHH-HHHHHSCTTCE-EEESSSH
T ss_pred HhcCCEEEECCChHHHH-HHHH-HHHHhcCCCCe-EEEeCCC
Confidence 99999999999976553 4554 68899999999 5667773
No 99
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.78 E-value=7.1e-09 Score=94.74 Aligned_cols=103 Identities=13% Similarity=0.182 Sum_probs=74.7
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCcE-EEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
+++.+++|||||+|.||+.+|+.++ ..|.+ |.+||+++... +...+.+ +.....+++++++++|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~-~~g~~~v~~~~~~~~~~-~~~~~~~------------g~~~~~~~~~~~~~~Dv 71 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALY-RKGFRIVQVYSRTEESA-RELAQKV------------EAEYTTDLAEVNPYAKL 71 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSHHHH-HHHHHHT------------TCEEESCGGGSCSCCSE
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHH-HCCCeEEEEEeCCHHHH-HHHHHHc------------CCceeCCHHHHhcCCCE
Confidence 4566789999999999999999974 56888 89999987642 2221111 11224578888899999
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCH
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~ 279 (342)
|++++|.. ..+.++ ++....+++++++|+++.|...+.
T Consensus 72 vi~av~~~-~~~~v~-~~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 72 YIVSLKDS-AFAELL-QGIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp EEECCCHH-HHHHHH-HHHHTTCCTTCEEEECCTTSCGGG
T ss_pred EEEecCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCchHH
Confidence 99999954 334444 345567889999999999877543
No 100
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.70 E-value=5.5e-07 Score=86.31 Aligned_cols=225 Identities=16% Similarity=0.181 Sum_probs=126.7
Q ss_pred HHHHHHhCCCeEEEecCCC--CCCCHHHHHHHhc---C------CccEEEecCCcCccHHHHHHhhccCCceEEEccccc
Q 019328 29 WINLLIEQDCRVEICTQKK--TILSVEDIIALIG---D------KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGY 97 (342)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~------~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~G~ 97 (342)
..+.|.+.|+++.+-.... ..++.++..+.=. + ++|+|+. ...+...+. . +.+.|...+......+
T Consensus 22 ~v~~l~~~g~~v~ve~~ag~~~~f~d~~y~~aga~i~~~~~~~~~ad~i~~-vksP~~~~~-~-~~~~g~~~~~y~~~~~ 98 (361)
T 1pjc_A 22 SVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAWSREMVVK-VKEPLPAEY-D-LMQKDQLLFTYLHLAA 98 (361)
T ss_dssp HHHHHHTTTCEEEEETTTTGGGTCCHHHHHHHTCEEESSHHHHHTSSEEEC-SSCCCGGGG-G-GCCTTCEEEECCCGGG
T ss_pred HHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEECCHHHHhcCCeEEE-ECCCCHHHH-H-hhcCCCEEEEEecccc
Confidence 3567777888876533321 2455555542100 0 3787653 333333332 1 2222323444334444
Q ss_pred CccChhHHHhCCceEEc---CCCCC-----chhHHHHHH--HHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCE
Q 019328 98 NNVDVNAANKYGIAVGN---TPGVL-----TETTAELAA--SLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQT 167 (342)
Q Consensus 98 d~id~~~a~~~gI~v~n---~p~~~-----~~~vAE~al--~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gkt 167 (342)
+.-.++++.++|+...| .|.-. -.++++.+- +.+++.. ++.. ...|+ +..... . ..+.+++
T Consensus 99 ~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA~-nt~~----~~~g~--G~~l~~-l-~~l~~~~ 169 (361)
T 1pjc_A 99 ARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGAR-FLER----QQGGR--GVLLGG-V-PGVKPGK 169 (361)
T ss_dssp CHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHHH-HTSG----GGTSC--CCCTTC-B-TTBCCCE
T ss_pred CHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHHH-HHhh----ccCCC--ceeccC-C-CCCCCCE
Confidence 54446777888888765 34321 134554444 4444432 2211 11221 010000 1 2478899
Q ss_pred EEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCC
Q 019328 168 VGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLD 247 (342)
Q Consensus 168 vGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt 247 (342)
|.|+|.|.+|+.+++.+ +++|++|+++|+++.+... ..+..+.. .........++.+.+..+|+|+.+++..
T Consensus 170 VlViGaGgvG~~aa~~a-~~~Ga~V~v~dr~~~r~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 170 VVILGGGVVGTEAAKMA-VGLGAQVQIFDINVERLSY-LETLFGSR------VELLYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp EEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHHH-HHHHHGGG------SEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred EEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHHHH-HHHhhCce------eEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence 99999999999999996 7999999999998764211 11111000 0000001125667788999999998753
Q ss_pred c-ccccccCHhHHccCCCCcEEEecCC
Q 019328 248 K-TTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 248 ~-~t~~li~~~~l~~mk~gailIN~sR 273 (342)
. .+..++.++.++.||+|++++|++-
T Consensus 242 ~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 242 GRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp TSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 3 2456678889999999999999974
No 101
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.69 E-value=7.9e-08 Score=90.36 Aligned_cols=96 Identities=19% Similarity=0.221 Sum_probs=71.6
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
.+++|||||+|.||+.+++.+++.+|. +|.+|||++... +.+.+.++ . ......++++++++||+|++
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~-~~l~~~~~-------~---~~~~~~~~~e~v~~aDiVi~ 202 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENA-EKFADTVQ-------G---EVRVCSSVQEAVAGADVIIT 202 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHH-HHHHHHSS-------S---CCEECSSHHHHHTTCSEEEE
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHH-HHHHHHhh-------C---CeEEeCCHHHHHhcCCEEEE
Confidence 467999999999999999987555677 899999987642 22222211 0 01234689999999999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCCcc
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~ 276 (342)
|+|. +..++.. +.+++|.++++++....
T Consensus 203 atp~---~~~v~~~---~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 203 VTLA---TEPILFG---EWVKPGAHINAVGASRP 230 (312)
T ss_dssp CCCC---SSCCBCG---GGSCTTCEEEECCCCST
T ss_pred EeCC---CCcccCH---HHcCCCcEEEeCCCCCC
Confidence 9984 3556654 57899999999987665
No 102
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.68 E-value=1.8e-07 Score=84.93 Aligned_cols=102 Identities=16% Similarity=0.222 Sum_probs=74.3
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
++|||||+|.||+.+++.| ...|.+|.+||+++... +.+.+.++ .....+++++++++|+|++++|
T Consensus 4 m~i~iiG~G~mG~~~a~~l-~~~g~~v~~~~~~~~~~-~~~~~~~g------------~~~~~~~~~~~~~~D~Vi~~v~ 69 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGL-KQTPHELIISGSSLERS-KEIAEQLA------------LPYAMSHQDLIDQVDLVILGIK 69 (259)
T ss_dssp CEEEEECCSHHHHHHHHHH-TTSSCEEEEECSSHHHH-HHHHHHHT------------CCBCSSHHHHHHTCSEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHH-HhCCCeEEEECCCHHHH-HHHHHHcC------------CEeeCCHHHHHhcCCEEEEEeC
Confidence 4899999999999999997 57788999999987542 22221111 1224688999999999999999
Q ss_pred CCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
.... .+.+..+++|.++|+++.|-- .+.+.+.+..+
T Consensus 70 -~~~~-----~~v~~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 70 -PQLF-----ETVLKPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp -GGGH-----HHHHTTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred -cHhH-----HHHHHHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 3333 345566778999999976643 45577777644
No 103
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.67 E-value=3.2e-08 Score=87.94 Aligned_cols=95 Identities=16% Similarity=0.226 Sum_probs=68.3
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
.+++|+|||+|.||+.+|+.| ...|.+|.++||+.+.. +.. ... +. .. .+++++++++|+|+++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l-~~~g~~V~~~~r~~~~~-~~~--------~~~---g~--~~-~~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRL-VGSGFKVVVGSRNPKRT-ARL--------FPS---AA--QV-TFQEEAVSSPEVIFVA 90 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHH-HHTTCCEEEEESSHHHH-HHH--------SBT---TS--EE-EEHHHHTTSCSEEEEC
T ss_pred CCCEEEEEccCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHH--------HHc---CC--ce-ecHHHHHhCCCEEEEC
Confidence 457899999999999999998 57789999999986542 111 111 11 11 2788899999999999
Q ss_pred CCCCcccccccCHhHHccCCCCcEEEecCCCccCC
Q 019328 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (342)
Q Consensus 244 lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd 278 (342)
+|. .....++. ++.+.+++++|++++|...+
T Consensus 91 v~~-~~~~~v~~---l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 91 VFR-EHYSSLCS---LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp SCG-GGSGGGGG---GHHHHTTCEEEECCCCCHHH
T ss_pred CCh-HHHHHHHH---HHHhcCCCEEEEeCCCcccc
Confidence 994 44555553 33334799999999997543
No 104
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.67 E-value=4.5e-08 Score=88.66 Aligned_cols=105 Identities=23% Similarity=0.320 Sum_probs=73.3
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCc----EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKM----NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~----~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
++|||||+|.||+.+|+.| ...|. +|++|||+++.. +.+.+.+ +.....++++++++||+|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l-~~~g~~~~~~V~~~~r~~~~~-~~~~~~~------------g~~~~~~~~e~~~~aDvVi 68 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGM-INKNIVSSNQIICSDLNTANL-KNASEKY------------GLTTTTDNNEVAKNADILI 68 (247)
T ss_dssp CCEEEECCSHHHHHHHHHH-HHTTSSCGGGEEEECSCHHHH-HHHHHHH------------CCEECSCHHHHHHHCSEEE
T ss_pred CeEEEECccHHHHHHHHHH-HhCCCCCCCeEEEEeCCHHHH-HHHHHHh------------CCEEeCChHHHHHhCCEEE
Confidence 5899999999999999998 46787 999999987642 2222111 1223468899999999999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHc
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~ 288 (342)
+++|. ...+.++ ++....++++.++|.+.-|- ..+.|.+.+..
T Consensus 69 lav~~-~~~~~v~-~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 69 LSIKP-DLYASII-NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ECSCT-TTHHHHC----CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred EEeCH-HHHHHHH-HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 99972 3344444 44556688999999776553 35567666654
No 105
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.67 E-value=2e-07 Score=86.80 Aligned_cols=156 Identities=15% Similarity=0.154 Sum_probs=90.8
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhh---hhccCCCCC-------------ccccccCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQ---FLKANGEQP-------------VTWKRASS 229 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~-------------~~~~~~~~ 229 (342)
++|||||.|.||..+|..++ ..|.+|++||+++...... ...... .+...+... .......+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la-~~G~~V~~~d~~~~~~~~~-~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAA-ATGHTVVLVDQTEDILAKS-KKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHH-HHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCeEEEEECCHHHHHHH-HHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecC
Confidence 68999999999999999985 5699999999987543211 000000 000011000 01122467
Q ss_pred HHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCc
Q 019328 230 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGL 309 (342)
Q Consensus 230 l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L 309 (342)
+++.++.||+|++++|...+.+.-+-++....++++++++..+.| +....+.+.+... -.-.+...+. |.
T Consensus 94 ~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~--i~~~~l~~~~~~~-~~~~g~h~~~--P~----- 163 (302)
T 1f0y_A 94 AASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSS--LQITSIANATTRQ-DRFAGLHFFN--PV----- 163 (302)
T ss_dssp HHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSS--SCHHHHHTTSSCG-GGEEEEEECS--ST-----
T ss_pred HHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCC--CCHHHHHHhcCCc-ccEEEEecCC--Cc-----
Confidence 888899999999999976554444445555678899999854444 3345565555421 2234555554 32
Q ss_pred cCCCceEEcCCCCCCcHHHHHHHHH
Q 019328 310 SEMKNAIVVPHIASASKWTREGMAT 334 (342)
Q Consensus 310 ~~~~nvi~TPHia~~t~~~~~~~~~ 334 (342)
...+.+.+.++-. .+.+..+.+..
T Consensus 164 ~~~~~~~i~~g~~-~~~e~~~~~~~ 187 (302)
T 1f0y_A 164 PVMKLVEVIKTPM-TSQKTFESLVD 187 (302)
T ss_dssp TTCCEEEEECCTT-CCHHHHHHHHH
T ss_pred ccCceEEEeCCCC-CCHHHHHHHHH
Confidence 1234455555432 24455544443
No 106
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.66 E-value=2.1e-08 Score=88.84 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=60.8
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
.++.+++|+|||+|.||+.+|+.| ...|.+|++|||+++ .+++||+|
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l-~~~g~~V~~~~~~~~--------------------------------~~~~aD~v 61 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNF-EIAGHEVTYYGSKDQ--------------------------------ATTLGEIV 61 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHH-HHTTCEEEEECTTCC--------------------------------CSSCCSEE
T ss_pred cccCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHH--------------------------------HhccCCEE
Confidence 368899999999999999999998 578999999987521 35789999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCCCcc
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~ 276 (342)
++++| +..++.++. +....++ ++++|++++|--
T Consensus 62 i~av~-~~~~~~v~~-~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 62 IMAVP-YPALAALAK-QYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp EECSC-HHHHHHHHH-HTHHHHT-TSEEEECCCCBC
T ss_pred EEcCC-cHHHHHHHH-HHHHhcC-CCEEEEECCCCC
Confidence 99999 666666553 3344567 999999999765
No 107
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.64 E-value=1.2e-07 Score=92.91 Aligned_cols=124 Identities=15% Similarity=0.242 Sum_probs=83.2
Q ss_pred cccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhh--------hhhhccCCCCCccccccCCH
Q 019328 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAY--------GQFLKANGEQPVTWKRASSM 230 (342)
Q Consensus 159 ~g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l 230 (342)
.+++..-++|||||+|.||..+|..|+ . |.+|++||+++... +....+. ...+.. . ........++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La-~-G~~V~~~D~~~~~v-~~l~~g~~~i~e~~l~~ll~~-~--~~~l~~ttd~ 103 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIA-Q-NHEVVALDIVQAKV-DMLNQKISPIVDKEIQEYLAE-K--PLNFRATTDK 103 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCHHHH-HHHHTTCCSSCCHHHHHHHHH-S--CCCEEEESCH
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHH-c-CCeEEEEecCHHHh-hHHhccCCccccccHHHHHhh-c--cCCeEEEcCH
Confidence 456777789999999999999999985 5 99999999987642 1111100 000000 0 0112234688
Q ss_pred HHHhhcCCEEEEcCCCCccc-------cccc--CHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 231 DEVLREADVISLHPVLDKTT-------YHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 231 ~ell~~sDiV~l~lplt~~t-------~~li--~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
++.++.||+|++|+|...+. ..+. -+.... +++|+++|+.|+-++--.+.+.+.+.+.
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~ 170 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID 170 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc
Confidence 99999999999999954321 1222 134555 8999999999998888888999888765
No 108
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.60 E-value=1.8e-07 Score=88.14 Aligned_cols=108 Identities=19% Similarity=0.258 Sum_probs=75.5
Q ss_pred cCCCEEEEEccChHHHHHHHHHHhcCC----cEEEEEcCChh-hHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcC
Q 019328 163 LKGQTVGVIGAGRIGSAYARMMVEGFK----MNLIYYDLYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 163 l~gktvGIiG~G~IG~~vA~~l~~a~g----~~V~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~s 237 (342)
...++|||||+|.||..+|+.|+ ..| .+|++|||++. ...+... .+ +.....+..++++.|
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~-~~G~~~~~~V~v~~r~~~~~~~~~l~-~~------------G~~~~~~~~e~~~~a 85 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFT-AAGVLAAHKIMASSPDMDLATVSALR-KM------------GVKLTPHNKETVQHS 85 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHH-HTTSSCGGGEEEECSCTTSHHHHHHH-HH------------TCEEESCHHHHHHHC
T ss_pred cCCCEEEEECCCHHHHHHHHHHH-HCCCCCcceEEEECCCccHHHHHHHH-Hc------------CCEEeCChHHHhccC
Confidence 44468999999999999999984 567 78999999874 1222211 11 112235788899999
Q ss_pred CEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHc
Q 019328 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~ 288 (342)
|+|++++| ......++ .+....++++.++|+++-|-- .+.|.+.+.+
T Consensus 86 DvVilav~-~~~~~~vl-~~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 86 DVLFLAVK-PHIIPFIL-DEIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp SEEEECSC-GGGHHHHH-HHHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred CEEEEEeC-HHHHHHHH-HHHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 99999999 44555544 345556889999999977643 4567677764
No 109
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.59 E-value=8.6e-08 Score=88.62 Aligned_cols=92 Identities=18% Similarity=0.291 Sum_probs=68.8
Q ss_pred CEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
++|||||+ |.||+.+|+.| ...|.+|++|||++.... ...+ + + . ...++.+++++||+|++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l-~~~g~~V~~~~r~~~~~~-~~~~-~-------g---~---~~~~~~~~~~~aDvVi~av 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKI-HDSAHHLAAIEIAPEGRD-RLQG-M-------G---I---PLTDGDGWIDEADVVVLAL 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHSSSEEEEECCSHHHHH-HHHH-T-------T---C---CCCCSSGGGGTCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHH-HhCCCEEEEEECCHHHHH-HHHh-c-------C---C---CcCCHHHHhcCCCEEEEcC
Confidence 58999999 99999999998 577899999999875421 1111 1 1 1 1136678889999999999
Q ss_pred CCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 245 VLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
|... ++.++ ++....+++++++|+++.|.
T Consensus 76 ~~~~-~~~v~-~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 76 PDNI-IEKVA-EDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp CHHH-HHHHH-HHHGGGSCTTCEEEESCSHH
T ss_pred CchH-HHHHH-HHHHHhCCCCCEEEECCCCc
Confidence 9433 45544 45556789999999999887
No 110
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.57 E-value=6.1e-07 Score=82.94 Aligned_cols=112 Identities=11% Similarity=0.101 Sum_probs=77.3
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCc---EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKM---NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
.++|||||+|+||+.+|+.++ ..|. +|.+|||++... +...+.+ +.....+..+++++||+|+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~-~~g~~~~~V~v~dr~~~~~-~~l~~~~------------gi~~~~~~~~~~~~aDvVi 68 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLI-ANGYDPNRICVTNRSLDKL-DFFKEKC------------GVHTTQDNRQGALNADVVV 68 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHH-HTTCCGGGEEEECSSSHHH-HHHHHTT------------CCEEESCHHHHHSSCSEEE
T ss_pred CCEEEEEcccHHHHHHHHHHH-HCCCCCCeEEEEeCCHHHH-HHHHHHc------------CCEEeCChHHHHhcCCeEE
Confidence 468999999999999999974 5677 899999987643 2222111 1223468889999999999
Q ss_pred EcCCCCcccccccCHhHHcc-CCCCcEEEecCCCccCCHHHHHHHHHcC-CccEE
Q 019328 242 LHPVLDKTTYHLINKERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQN-PMFRV 294 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~-mk~gailIN~sRG~~vd~~aL~~aL~~g-~i~ga 294 (342)
+++|. .....++ ++.-.. ++++.++|+++-|- ..+.|.+.+..+ ++.++
T Consensus 69 lav~p-~~~~~vl-~~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~~~~vvr~ 119 (280)
T 3tri_A 69 LAVKP-HQIKMVC-EELKDILSETKILVISLAVGV--TTPLIEKWLGKASRIVRA 119 (280)
T ss_dssp ECSCG-GGHHHHH-HHHHHHHHTTTCEEEECCTTC--CHHHHHHHHTCCSSEEEE
T ss_pred EEeCH-HHHHHHH-HHHHhhccCCCeEEEEecCCC--CHHHHHHHcCCCCeEEEE
Confidence 99982 3333333 333344 68888999887664 356787887652 44443
No 111
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.56 E-value=3.6e-07 Score=90.96 Aligned_cols=155 Identities=21% Similarity=0.264 Sum_probs=94.6
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhc---cCCCCCc--------cccccCCHHHH
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK---ANGEQPV--------TWKRASSMDEV 233 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~l~el 233 (342)
-++|||||.|.||..+|..++ ..|.+|++||+++...... .+.....+. ..+.... ......+++ .
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la-~aG~~V~l~D~~~e~l~~~-~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 81 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAA-SHGHQVLLYDISAEALTRA-IDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-A 81 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHH-HHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-G
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCeEEEEECCHHHHHHH-HHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-H
Confidence 358999999999999999985 6799999999997643221 111000000 0111000 011234665 5
Q ss_pred hhcCCEEEEcCCCCcccccccCHhHHccCCCCcEE-EecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCC
Q 019328 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAIL-VNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEM 312 (342)
Q Consensus 234 l~~sDiV~l~lplt~~t~~li~~~~l~~mk~gail-IN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~ 312 (342)
+++||+|+.++|.+.+.+.-+-++..+.++++++| .|+|.-+ ...+.+++.. .-...++..|.+-|. +
T Consensus 82 ~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~---i~~ia~~~~~-p~~~ig~hf~~Pa~v-------~ 150 (483)
T 3mog_A 82 LAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSIS---ITAIAAEIKN-PERVAGLHFFNPAPV-------M 150 (483)
T ss_dssp GGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSC---HHHHTTTSSS-GGGEEEEEECSSTTT-------C
T ss_pred hcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCC---HHHHHHHccC-ccceEEeeecChhhh-------C
Confidence 78999999999977766655556677789999999 5777544 3566665543 345667777764442 1
Q ss_pred CceEEcCCCCCCcHHHHHHHHH
Q 019328 313 KNAIVVPHIASASKWTREGMAT 334 (342)
Q Consensus 313 ~nvi~TPHia~~t~~~~~~~~~ 334 (342)
+-+.+.|+-. .+.+..+.+..
T Consensus 151 ~Lvevv~g~~-Ts~e~~~~~~~ 171 (483)
T 3mog_A 151 KLVEVVSGLA-TAAEVVEQLCE 171 (483)
T ss_dssp CEEEEEECSS-CCHHHHHHHHH
T ss_pred CeEEEecCCC-CCHHHHHHHHH
Confidence 3455555432 23444444433
No 112
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.56 E-value=1.9e-06 Score=79.56 Aligned_cols=171 Identities=18% Similarity=0.247 Sum_probs=107.6
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--cCccHH-HHHHhhccCCceEEEcccccCccChh
Q 019328 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDVN 103 (342)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~i~~~~--~~~~~~-~~~~~~~l~~k~i~~~g~G~d~id~~ 103 (342)
..++.|.+.+....++ ..+++|+.+.+. +..++++++.+ ..++++ +++...-- |=+ -|+-.+++-
T Consensus 57 ~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~--KDV----Dg~~~~N~g 129 (285)
T 3p2o_A 57 ACEECGIKSLVYHLNE-NITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISS--KDV----DGFHPINVG 129 (285)
T ss_dssp HHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGG--GCT----TCCSHHHHH
T ss_pred HHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCcc--ccc----ccCCHhhhh
Confidence 4456688776554432 357888877662 24789998764 345544 44443211 211 122112211
Q ss_pred HHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccCh-HHHHHHH
Q 019328 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYAR 182 (342)
Q Consensus 104 ~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~-IG~~vA~ 182 (342)
... .+.++.....++.-++-++ ++ .+.++.||++.|||.|. +|+.+|+
T Consensus 130 ~l~------~g~~~g~~PcTp~gv~~lL----~~---------------------~~i~l~Gk~vvVvGrs~iVG~p~A~ 178 (285)
T 3p2o_A 130 YLN------LGLESGFLPCTPLGVMKLL----KA---------------------YEIDLEGKDAVIIGASNIVGRPMAT 178 (285)
T ss_dssp HHH------TTCCSSCCCHHHHHHHHHH----HH---------------------TTCCCTTCEEEEECCCTTTHHHHHH
T ss_pred hhh------cCCCCCCCCCCHHHHHHHH----HH---------------------hCCCCCCCEEEEECCCchHHHHHHH
Confidence 111 1123313345555544222 11 13589999999999998 6999999
Q ss_pred HHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHccC
Q 019328 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATM 262 (342)
Q Consensus 183 ~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~m 262 (342)
.| ...|++|..++++ ..++++.+++||+|+.+++. .++|..+. +
T Consensus 179 lL-~~~gAtVtv~h~~----------------------------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~---v 222 (285)
T 3p2o_A 179 ML-LNAGATVSVCHIK----------------------------TKDLSLYTRQADLIIVAAGC----VNLLRSDM---V 222 (285)
T ss_dssp HH-HHTTCEEEEECTT----------------------------CSCHHHHHTTCSEEEECSSC----TTCBCGGG---S
T ss_pred HH-HHCCCeEEEEeCC----------------------------chhHHHHhhcCCEEEECCCC----CCcCCHHH---c
Confidence 97 6889999988753 14788999999999999983 45677655 4
Q ss_pred CCCcEEEecCCCcc
Q 019328 263 KKEAILVNCSRGPV 276 (342)
Q Consensus 263 k~gailIN~sRG~~ 276 (342)
|||+++||++.-.+
T Consensus 223 k~GavVIDVgi~~~ 236 (285)
T 3p2o_A 223 KEGVIVVDVGINRL 236 (285)
T ss_dssp CTTEEEEECCCEEC
T ss_pred CCCeEEEEeccCcc
Confidence 99999999986654
No 113
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.47 E-value=7.1e-07 Score=88.05 Aligned_cols=119 Identities=15% Similarity=0.172 Sum_probs=78.9
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCC--------CccccccCCHHHHhhcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--------PVTWKRASSMDEVLREA 237 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~ell~~s 237 (342)
++|+|||+|.||..+|..|+ ..|.+|++||+++... +....+..... ..+.. .-......+++++++.|
T Consensus 3 mkI~VIG~G~vG~~lA~~La-~~G~~V~~~D~~~~~v-~~l~~g~~~i~-e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFA-ELGANVRCIDTDRNKI-EQLNSGTIPIY-EPGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHHTCSCCC-STTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred CEEEEECcCHHHHHHHHHHH-hcCCEEEEEECCHHHH-HHHHcCCCccc-CCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence 58999999999999999984 6799999999987642 22111100000 00000 00112346889999999
Q ss_pred CEEEEcCCCCcc---------cccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHc
Q 019328 238 DVISLHPVLDKT---------TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 238 DiV~l~lplt~~---------t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~ 288 (342)
|+|++|+|...+ .+..+ +.....+++|.++|+.|.-.+-..+.+.+.+.+
T Consensus 80 DvViiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CEEEEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 999999995532 22222 455667899999999997665556667666655
No 114
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.45 E-value=4.3e-07 Score=89.16 Aligned_cols=120 Identities=10% Similarity=0.093 Sum_probs=78.2
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCC-------cc-ccccCCHHHHhhcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP-------VT-WKRASSMDEVLREA 237 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~l~ell~~s 237 (342)
.+|+|||+|.||..+|..|+ ..|.+|++||++++.. +....+.. .....+... .+ .....++++.++.|
T Consensus 1 mkI~VIG~G~vG~~~A~~la-~~G~~V~~~d~~~~~~-~~l~~~~~-~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~a 77 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLS-ARGHEVIGVDVSSTKI-DLINQGKS-PIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDS 77 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHTTCC-SSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCEEEEEECCHHHH-HHHhCCCC-CcCCCCHHHHHHhhcccCceEEeCCHHHHhccC
Confidence 37999999999999999984 6799999999987642 21111000 000000000 01 12346788889999
Q ss_pred CEEEEcCCCCcccccccC--------HhHHccCCC---CcEEEecCCCccCC-HHHHHHHHHc
Q 019328 238 DVISLHPVLDKTTYHLIN--------KERLATMKK---EAILVNCSRGPVID-EVALVEHLKQ 288 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~--------~~~l~~mk~---gailIN~sRG~~vd-~~aL~~aL~~ 288 (342)
|+|++|+|...+..+..| ++....+++ +.++|+.|...+-. .+.+.+.+.+
T Consensus 78 DvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 78 DVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred CEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999999996554222222 344456788 99999999777655 5667777765
No 115
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.45 E-value=2.2e-07 Score=84.40 Aligned_cols=101 Identities=17% Similarity=0.207 Sum_probs=69.1
Q ss_pred CEEEEEccChHHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
.+|||||+|.||+.+|+.|+ ..| .+|.+|||++... +...+.++ .....++++++ .+|+|++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~-~~g~~~v~~~~r~~~~~-~~~~~~~g------------~~~~~~~~~~~-~~D~vi~~v 65 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLV-KQGGYRIYIANRGAEKR-ERLEKELG------------VETSATLPELH-SDDVLILAV 65 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHCSCEEEEECSSHHHH-HHHHHHTC------------CEEESSCCCCC-TTSEEEECS
T ss_pred CEEEEECchHHHHHHHHHHH-HCCCCeEEEECCCHHHH-HHHHHhcC------------CEEeCCHHHHh-cCCEEEEEe
Confidence 37999999999999999984 568 8999999987542 22211111 11234666777 899999999
Q ss_pred CCCcccccccCHhHHccCC-CCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 245 VLDKTTYHLINKERLATMK-KEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk-~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
| ....+.++ ..++ ++.++|+++.|-- .+.|.+.+..+
T Consensus 66 ~-~~~~~~v~-----~~l~~~~~ivv~~~~g~~--~~~l~~~~~~~ 103 (263)
T 1yqg_A 66 K-PQDMEAAC-----KNIRTNGALVLSVAAGLS--VGTLSRYLGGT 103 (263)
T ss_dssp C-HHHHHHHH-----TTCCCTTCEEEECCTTCC--HHHHHHHTTSC
T ss_pred C-chhHHHHH-----HHhccCCCEEEEecCCCC--HHHHHHHcCCC
Confidence 9 55444433 3332 2899999865543 36777777654
No 116
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.44 E-value=1.1e-06 Score=86.48 Aligned_cols=120 Identities=14% Similarity=0.165 Sum_probs=80.1
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCC--------CCccccccCCHHHHhhcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE--------QPVTWKRASSMDEVLREA 237 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~ell~~s 237 (342)
-+++|||+|.+|..+|..|+ ..|.+|++||+++.+. +....+.... ...+. ..-......++.+.++.|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La-~~G~~V~~~D~~~~kv-~~l~~g~~~~-~epgl~~~~~~~~~~g~l~~ttd~~ea~~~a 85 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFS-DFGHEVVCVDKDARKI-ELLHQNVMPI-YEPGLDALVASNVKAGRLSFTTDLAEGVKDA 85 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCSTTH-HHHTTTCCSS-CCTTHHHHHHHHHHTTCEEEESCHHHHHTTC
T ss_pred eEEEEEcCCHHHHHHHHHHH-HCCCEEEEEeCCHHHH-HHHhcCCCCc-cCCCHHHHHHhhcccCCEEEECCHHHHHhcC
Confidence 47999999999999999985 6799999999987642 2211100000 00000 000112346899999999
Q ss_pred CEEEEcCCCCcc----------cccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 238 DVISLHPVLDKT----------TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 238 DiV~l~lplt~~----------t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
|+|++|+|...+ .+..+ +.....|++|.++|+.|.-++--.+.+.+.+.+.
T Consensus 86 Dvvii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 86 DAVFIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV 146 (446)
T ss_dssp SEEEECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 999999985432 12222 4566789999999999976666667777777653
No 117
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.41 E-value=1.4e-06 Score=83.45 Aligned_cols=118 Identities=14% Similarity=0.124 Sum_probs=76.8
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhh--ccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFL--KANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
.++|+|||.|.||..+|..| ...|.+|..|+|++... +..... +... ......+.......++++.++.||+|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~L-a~~G~~V~l~~r~~~~~-~~i~~~-~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVil 105 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVL-ARKGQKVRLWSYESDHV-DEMQAE-GVNNRYLPNYPFPETLKAYCDLKASLEGVTDILI 105 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHH-HTTTCCEEEECSCHHHH-HHHHHH-SSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEE
T ss_pred CCeEEEECccHHHHHHHHHH-HHCCCeEEEEeCCHHHH-HHHHHc-CCCcccCCCCccCCCeEEECCHHHHHhcCCEEEE
Confidence 46899999999999999998 46789999999986542 111110 0000 0000001112234688999999999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCCccCCH----HHHHHHHH
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE----VALVEHLK 287 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~----~aL~~aL~ 287 (342)
++|. ...+.++ ++....+++++++|+++.|-..++ +.+.+.+.
T Consensus 106 aVp~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~ 152 (356)
T 3k96_A 106 VVPS-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELG 152 (356)
T ss_dssp CCCH-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHC
T ss_pred CCCH-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcC
Confidence 9993 3344433 455567899999999988766653 34444443
No 118
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.39 E-value=1e-06 Score=77.36 Aligned_cols=124 Identities=12% Similarity=0.135 Sum_probs=81.6
Q ss_pred CEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
++|+|+| .|.||+.+++.| ...|.+|.++||+++.. +...+.++..... .. .. ..+++++++++|+|++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l-~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~---~~--~~-~~~~~~~~~~~D~Vi~~~ 72 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRL-ATLGHEIVVGSRREEKA-EAKAAEYRRIAGD---AS--IT-GMKNEDAAEACDIAVLTI 72 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HTTTCEEEEEESSHHHH-HHHHHHHHHHHSS---CC--EE-EEEHHHHHHHCSEEEECS
T ss_pred CeEEEEcCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHHHHhcccccc---CC--CC-hhhHHHHHhcCCEEEEeC
Confidence 3799999 999999999998 57789999999986542 2221111111100 00 11 257888899999999999
Q ss_pred CCCcccccccCHhHHccCCCCcEEEecCCCccCC------------HHHHHHHHHcCCccEEEeecCCCCCC
Q 019328 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVID------------EVALVEHLKQNPMFRVGLDVFEDEPY 304 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk~gailIN~sRG~~vd------------~~aL~~aL~~g~i~gaalDV~~~EP~ 304 (342)
| ...++.++. +....++ +.++|+++.|--.+ .+.+.+.+.. ...++++.+.|.
T Consensus 73 ~-~~~~~~~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~~~v~~~~~~~~ 137 (212)
T 1jay_A 73 P-WEHAIDTAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----EKVVSALHTIPA 137 (212)
T ss_dssp C-HHHHHHHHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----SCEEECCTTCCH
T ss_pred C-hhhHHHHHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----CeEEEEccchHH
Confidence 9 333444332 2333454 89999999876543 5677777753 235688877774
No 119
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.38 E-value=2e-06 Score=85.16 Aligned_cols=130 Identities=16% Similarity=0.161 Sum_probs=78.8
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHH--h-hhhhh-----hccCCCCCccccccCCHHHHhhc
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFV--T-AYGQF-----LKANGEQPVTWKRASSMDEVLRE 236 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~--~-~~~~~-----~~~~~~~~~~~~~~~~l~ell~~ 236 (342)
-++|||||.|.||..+|..++ ..|.+|++||+++........ . .+... +..............++ +.++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la-~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~ 114 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFA-RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELST 114 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTT
T ss_pred CCEEEEECcCHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCC
Confidence 468999999999999999984 679999999998754221100 0 00000 00000000001113466 46789
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVF 299 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~ 299 (342)
||+|+.++|...+.+.-+-++....++++++|+.. ..+ +....|.+++.. .-.-.++..|
T Consensus 115 aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~sn-Ts~-~~~~~la~~~~~-~~~~ig~hf~ 174 (463)
T 1zcj_A 115 VDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTN-TSA-LNVDDIASSTDR-PQLVIGTHFF 174 (463)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEEC-CSS-SCHHHHHTTSSC-GGGEEEEEEC
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeC-CCC-cCHHHHHHHhcC-CcceEEeecC
Confidence 99999999965544444445566678999999863 333 344567666543 2334566666
No 120
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.38 E-value=6.3e-07 Score=81.33 Aligned_cols=99 Identities=23% Similarity=0.335 Sum_probs=67.0
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCC----cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFK----MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g----~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
.++|||||+|.||+.+|+.|+ ..| .+|.+|||+++. .+.....+++++++.||+|
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~-~~g~~~~~~v~~~~~~~~~--------------------~g~~~~~~~~~~~~~~D~v 62 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIA-NANIIKKENLFYYGPSKKN--------------------TTLNYMSSNEELARHCDII 62 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHH-HHTSSCGGGEEEECSSCCS--------------------SSSEECSCHHHHHHHCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCCCCCeEEEEeCCccc--------------------CceEEeCCHHHHHhcCCEE
Confidence 358999999999999999984 556 689999987542 0122245788999999999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
++++| ....+.++. +....++ +..+|....| ++.+.+.+.+..+
T Consensus 63 i~~v~-~~~~~~v~~-~l~~~l~-~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 63 VCAVK-PDIAGSVLN-NIKPYLS-SKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp EECSC-TTTHHHHHH-HSGGGCT-TCEEEECCSS--CCHHHHHHHHCTT
T ss_pred EEEeC-HHHHHHHHH-HHHHhcC-CCEEEEECCC--CCHHHHHHHhCCC
Confidence 99999 444554442 3344564 4455554444 3345666666553
No 121
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.37 E-value=1.2e-06 Score=83.00 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=75.3
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCC-Cccc-cccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ-PVTW-KRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~l~ell~~sDiV~l~ 243 (342)
++|+|||+|.||..+|..| ...|.+|.+||++++.. +...+..+..+...... .... ....+++++++.+|+|+++
T Consensus 5 mki~iiG~G~~G~~~a~~L-~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYL-ALKGQSVLAWDIDAQRI-KEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 5899999999999999998 46789999999986542 22211111000000000 0000 1245888989999999999
Q ss_pred CCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHc
Q 019328 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 244 lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~ 288 (342)
+|... +..++ ++....+++++++|+. -|.......+.+.+.+
T Consensus 83 v~~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 83 VPAIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp SCGGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred CCchH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 99544 34443 4556678999999998 4422344445666654
No 122
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.36 E-value=1.1e-06 Score=81.19 Aligned_cols=80 Identities=15% Similarity=0.142 Sum_probs=66.9
Q ss_pred cccCCCEEEEEccCh-HHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 161 NLLKGQTVGVIGAGR-IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 161 ~~l~gktvGIiG~G~-IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
.++.|+++.|||.|. +|+.+|+.| ...|++|..++++. .++.+.+++||+
T Consensus 155 i~l~gk~vvVIG~s~iVG~p~A~lL-~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADI 205 (288)
T 1b0a_A 155 IDTFGLNAVVIGASNIVGRPMSMEL-LLAGCTTTVTHRFT----------------------------KNLRHHVENADL 205 (288)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHH-HTTTCEEEEECSSC----------------------------SCHHHHHHHCSE
T ss_pred CCCCCCEEEEECCChHHHHHHHHHH-HHCCCeEEEEeCCc----------------------------hhHHHHhccCCE
Confidence 489999999999997 599999997 68999999886431 478899999999
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCcEEEecCCCcc
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~ 276 (342)
|+.+++. .++|..+.+ |||+++||+|.-.+
T Consensus 206 VI~Avg~----p~lI~~~~v---k~GavVIDVgi~r~ 235 (288)
T 1b0a_A 206 LIVAVGK----PGFIPGDWI---KEGAIVIDVGINRL 235 (288)
T ss_dssp EEECSCC----TTCBCTTTS---CTTCEEEECCCEEC
T ss_pred EEECCCC----cCcCCHHHc---CCCcEEEEccCCcc
Confidence 9999982 336776664 89999999997654
No 123
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.35 E-value=1.8e-06 Score=79.59 Aligned_cols=171 Identities=19% Similarity=0.215 Sum_probs=107.2
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--cCccHH-HHHHhhccCCceEEEcccccCccCh
Q 019328 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDV 102 (342)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~i~~~~--~~~~~~-~~~~~~~l~~k~i~~~g~G~d~id~ 102 (342)
+..++.|.+.+....++ ..+++|+.+.+. +..|+++++.+ ..+++. +++...-- |=+ -|+-.+++
T Consensus 58 k~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~--KDV----DG~~~~N~ 130 (286)
T 4a5o_A 58 KDCEEVGFLSQAYDLPA-ETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPD--KDV----DGFHPYNI 130 (286)
T ss_dssp HHHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCGG--GCT----TCCSHHHH
T ss_pred HHHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCcc--ccc----ccCChhhh
Confidence 34566788776554433 357888877652 14789998754 345543 33332111 210 11211221
Q ss_pred hHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccCh-HHHHHH
Q 019328 103 NAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYA 181 (342)
Q Consensus 103 ~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~-IG~~vA 181 (342)
-... .+.++ ....++.-++-++ ++ .+.++.||++.|||.|. +|+.+|
T Consensus 131 g~l~------~g~~~-~~PcTp~gv~~lL----~~---------------------~~i~l~Gk~vvVvGrs~iVG~plA 178 (286)
T 4a5o_A 131 GRLA------QRMPL-LRPCTPKGIMTLL----AS---------------------TGADLYGMDAVVVGASNIVGRPMA 178 (286)
T ss_dssp HHHH------TTCCS-SCCHHHHHHHHHH----HH---------------------TTCCCTTCEEEEECTTSTTHHHHH
T ss_pred HHHh------cCCCC-CCCCCHHHHHHHH----HH---------------------hCCCCCCCEEEEECCCchhHHHHH
Confidence 1111 11233 3345555544322 11 13589999999999987 799999
Q ss_pred HHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHcc
Q 019328 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (342)
Q Consensus 182 ~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~ 261 (342)
+.| ...|++|....++ ..++++.+++||+|+.+++. .++|..+.+
T Consensus 179 ~lL-~~~gAtVtv~hs~----------------------------T~~L~~~~~~ADIVI~Avg~----p~~I~~~~v-- 223 (286)
T 4a5o_A 179 LEL-LLGGCTVTVTHRF----------------------------TRDLADHVSRADLVVVAAGK----PGLVKGEWI-- 223 (286)
T ss_dssp HHH-HHTTCEEEEECTT----------------------------CSCHHHHHHTCSEEEECCCC----TTCBCGGGS--
T ss_pred HHH-HHCCCeEEEEeCC----------------------------CcCHHHHhccCCEEEECCCC----CCCCCHHHc--
Confidence 997 6889999987642 13788999999999999983 456776654
Q ss_pred CCCCcEEEecCCCcc
Q 019328 262 MKKEAILVNCSRGPV 276 (342)
Q Consensus 262 mk~gailIN~sRG~~ 276 (342)
|||+++||++.-.+
T Consensus 224 -k~GavVIDvgi~~~ 237 (286)
T 4a5o_A 224 -KEGAIVIDVGINRQ 237 (286)
T ss_dssp -CTTCEEEECCSCSS
T ss_pred -CCCeEEEEeccccc
Confidence 99999999986553
No 124
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.35 E-value=1.1e-06 Score=83.39 Aligned_cols=108 Identities=17% Similarity=0.186 Sum_probs=69.8
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCC-------cEEEEEcCChh-----hHHHHHHhhhhhhhcc-CC-CCCccccccCCH
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFK-------MNLIYYDLYQA-----TRLEKFVTAYGQFLKA-NG-EQPVTWKRASSM 230 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g-------~~V~~~d~~~~-----~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l 230 (342)
.++|+|||.|.||..+|..|+ ..| .+|.+||+++. .. +.... .+..... .+ ..........++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~-~~g~~~~~~~~~V~~~~r~~~~~~~~~~-~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 84 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVG-GNAAQLAQFDPRVTMWVFEEDIGGKKLT-EIINT-QHENVKYLPGHKLPPNVVAVPDV 84 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-HHHHHCTTEEEEEEEECCCCBSSSSBHH-HHHHH-HSCCTTTSTTCCCCTTEEEESSH
T ss_pred CCeEEEECCCHHHHHHHHHHH-hcCCcccCCCCeEEEEEcChhhhhhHHH-HHHHh-cCcccccCCcccCccCeEEEcCH
Confidence 358999999999999999985 456 89999999865 22 11111 0000000 00 001112224578
Q ss_pred HHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccC
Q 019328 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI 277 (342)
Q Consensus 231 ~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~v 277 (342)
+++++.||+|++++|. ..+..++ ++....+++++++|+++.|-..
T Consensus 85 ~~~~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~~ 129 (354)
T 1x0v_A 85 VQAAEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVDE 129 (354)
T ss_dssp HHHHTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBCS
T ss_pred HHHHcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccCC
Confidence 8889999999999994 3444443 3444567899999999887543
No 125
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.34 E-value=1.3e-06 Score=80.72 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=73.3
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
++.||++.|+|.|.+|+.++..| ...|+ +|.+++|+.++.. + +. .........+++++++++|+|
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L-~~~G~~~v~v~~R~~~~a~-~--------la----~~~~~~~~~~~~~~~~~aDiV 179 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANEL-YKIVRPTLTVANRTMSRFN-N--------WS----LNINKINLSHAESHLDEFDII 179 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHH-HTTCCSCCEEECSCGGGGT-T--------CC----SCCEEECHHHHHHTGGGCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEeCCHHHHH-H--------HH----HhcccccHhhHHHHhcCCCEE
Confidence 57899999999999999999998 58898 8999999875421 1 00 011111234566778899999
Q ss_pred EEcCCCC--cccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 241 SLHPVLD--KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 241 ~l~lplt--~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
+.++|.. ++....+. .+.++++.+++++.-.+. .+.-+.+|-+.|
T Consensus 180 InaTp~Gm~~~~~~~l~---~~~l~~~~~V~D~vY~P~-~T~ll~~A~~~G 226 (277)
T 3don_A 180 INTTPAGMNGNTDSVIS---LNRLASHTLVSDIVYNPY-KTPILIEAEQRG 226 (277)
T ss_dssp EECCC-------CCSSC---CTTCCSSCEEEESCCSSS-SCHHHHHHHHTT
T ss_pred EECccCCCCCCCcCCCC---HHHcCCCCEEEEecCCCC-CCHHHHHHHHCc
Confidence 9999964 32222232 456789999999987643 344334444444
No 126
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.34 E-value=2.2e-06 Score=85.24 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=78.0
Q ss_pred CEEEEEccChHHHHHHHHHHhc-CCcEEEEEcCChhhHHHHHHhhhhhhhccCCC-------CCccccccCCHHHHhhcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-------QPVTWKRASSMDEVLREA 237 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a-~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~ell~~s 237 (342)
++|+|||+|.||..+|..|++. .|.+|++||+++... +....+.. .....+. .........++.+.++.|
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v-~~l~~g~~-~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~a 87 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKI-AEWNSDKL-PIYEPGLDEIVFAARGRNLFFSSDIPKAIAEA 87 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHH-HHHTSSSC-SSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHH-HHHHCCCC-CcCCCCHHHHHHHhhcCCEEEECCHHHHhhcC
Confidence 5899999999999999998643 378999999987642 11111000 0000000 000112235777888999
Q ss_pred CEEEEcCCCCccc-----------cccc--CHhHHccCCCCcEEEecCCCccCCHHHHHHHHHc
Q 019328 238 DVISLHPVLDKTT-----------YHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 238 DiV~l~lplt~~t-----------~~li--~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~ 288 (342)
|+|++|+|..... ..+. -+...+.+++|.++|+.|.-.+-..+.+.+.+.+
T Consensus 88 Dvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 88 DLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp SEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999999854321 0111 2345667999999999987766666778888876
No 127
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.33 E-value=1.8e-06 Score=79.41 Aligned_cols=171 Identities=17% Similarity=0.167 Sum_probs=109.2
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--cCccHHH-HHHhhccCCceEEEcccccCccChh
Q 019328 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGETL-FAALSRAGGKAFSNMAVGYNNVDVN 103 (342)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~i~~~~--~~~~~~~-~~~~~~l~~k~i~~~g~G~d~id~~ 103 (342)
..++.|++.+....++ ..+++|+.+.+. +.+|+++++.+ ..+++.. ++...-. |=+ -|+..+++-
T Consensus 56 ~~~~~Gi~~~~~~lp~-~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~--KDV----DG~~p~n~g 128 (281)
T 2c2x_A 56 DCAKVGITSIRRDLPA-DISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPA--KDA----DGLHPTNLG 128 (281)
T ss_dssp HHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGG--GBT----TSCCHHHHH
T ss_pred HHHHcCCEEEEEECCC-CCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCcc--CCc----cCCChhhHH
Confidence 3456688776554433 457888887662 24789998753 3454443 3332111 210 122222222
Q ss_pred HHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccChH-HHHHHH
Q 019328 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRI-GSAYAR 182 (342)
Q Consensus 104 ~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~I-G~~vA~ 182 (342)
... .+.++ ....+++-++-++- + .+.++.||++.|||.|.| |+.+|+
T Consensus 129 ~l~------~g~~~-~~PcTp~gi~~ll~----~---------------------~~i~l~gk~vvVvG~s~iVG~p~A~ 176 (281)
T 2c2x_A 129 RLV------LGTPA-PLPCTPRGIVHLLR----R---------------------YDISIAGAHVVVIGRGVTVGRPLGL 176 (281)
T ss_dssp HHH------HTCCC-CCCHHHHHHHHHHH----H---------------------TTCCCTTCEEEEECCCTTTHHHHHH
T ss_pred HHh------CCCCC-CCCChHHHHHHHHH----H---------------------cCCCCCCCEEEEECCCcHHHHHHHH
Confidence 221 12243 44566665443331 1 134799999999999986 999999
Q ss_pred HHHhcC--CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHc
Q 019328 183 MMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLA 260 (342)
Q Consensus 183 ~l~~a~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~ 260 (342)
.| ... |++|..++++. .++.+.+++||+|+.+++. .++|..+.+
T Consensus 177 lL-~~~g~~atVtv~h~~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~v- 222 (281)
T 2c2x_A 177 LL-TRRSENATVTLCHTGT----------------------------RDLPALTRQADIVVAAVGV----AHLLTADMV- 222 (281)
T ss_dssp HH-TSTTTCCEEEEECTTC----------------------------SCHHHHHTTCSEEEECSCC----TTCBCGGGS-
T ss_pred HH-hcCCCCCEEEEEECch----------------------------hHHHHHHhhCCEEEECCCC----CcccCHHHc-
Confidence 97 677 89999886531 4788999999999999982 336777764
Q ss_pred cCCCCcEEEecCCCccC
Q 019328 261 TMKKEAILVNCSRGPVI 277 (342)
Q Consensus 261 ~mk~gailIN~sRG~~v 277 (342)
|+|+++||+|.-.+-
T Consensus 223 --k~GavVIDVgi~r~~ 237 (281)
T 2c2x_A 223 --RPGAAVIDVGVSRTD 237 (281)
T ss_dssp --CTTCEEEECCEEEET
T ss_pred --CCCcEEEEccCCCCC
Confidence 899999999976643
No 128
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.33 E-value=1.3e-06 Score=91.12 Aligned_cols=128 Identities=20% Similarity=0.198 Sum_probs=79.5
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHH---hhhhhhhccCCCC--------CccccccCCHHHHh
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFV---TAYGQFLKANGEQ--------PVTWKRASSMDEVL 234 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~l~ell 234 (342)
++|||||.|.||..+|..++ ..|.+|++||+++........ ..+....+ .+.. ........++ +.+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la-~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~-~G~~~~~~~~~~~~~i~~~~d~-~~~ 389 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALI-LSNYPVILKEVNEKFLEAGIGRVKANLQSRVR-KGSMSQEKFEKTMSLLKGSLDY-ESF 389 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHH-TTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC-----CTTHHHHTTTSEEEESSS-GGG
T ss_pred cEEEEEcCCHhhHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHhcceEEeCCH-HHH
Confidence 68999999999999999985 679999999999764321100 00000000 1100 0001123456 568
Q ss_pred hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEE-ecCCCccCCHHHHHHHHHcCCccEEEeecCC
Q 019328 235 READVISLHPVLDKTTYHLINKERLATMKKEAILV-NCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (342)
Q Consensus 235 ~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailI-N~sRG~~vd~~aL~~aL~~g~i~gaalDV~~ 300 (342)
++||+|+.++|.+.+.+.-+-++..+.++++++++ |+|. +....+.+.+.. .-.-.++..|.
T Consensus 390 ~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt---l~i~~la~~~~~-p~~~iG~hf~~ 452 (725)
T 2wtb_A 390 RDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST---IDLNKIGERTKS-QDRIVGAHFFS 452 (725)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS---SCHHHHTTTCSC-TTTEEEEEECS
T ss_pred CCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC---CCHHHHHHHhcC-CCCEEEecCCC
Confidence 99999999999777666555566677899999995 4543 333455555532 22345666666
No 129
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.32 E-value=2.1e-06 Score=83.45 Aligned_cols=116 Identities=16% Similarity=0.253 Sum_probs=76.6
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhh--------hhhccCCCCCccccccCCHHHHhhcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYG--------QFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~ell~~s 237 (342)
++|+|||+|.||..+|..|+ . |.+|++||+++... +....... ..+.. . ........++.+.++.|
T Consensus 1 MkI~VIG~G~vG~~~A~~La-~-G~~V~~~d~~~~~~-~~l~~~~~~i~e~~l~~~~~~-~--~~~l~~t~~~~~~~~~a 74 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLS-L-QNEVTIVDILPSKV-DKINNGLSPIQDEYIEYYLKS-K--QLSIKATLDSKAAYKEA 74 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHT-T-TSEEEEECSCHHHH-HHHHTTCCSSCCHHHHHHHHH-S--CCCEEEESCHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHh-C-CCEEEEEECCHHHH-HHHHcCCCCcCCCCHHHHHHh-c--cCcEEEeCCHHHHhcCC
Confidence 37999999999999999984 5 99999999987542 21111000 00000 0 00112235677888999
Q ss_pred CEEEEcCCCCc----------ccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 238 DVISLHPVLDK----------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 238 DiV~l~lplt~----------~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
|+|++|+|... .....+ +.... +++++++|+.|.-++-..+.+.+.+.+.
T Consensus 75 Dvviiavpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 75 ELVIIATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp SEEEECCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred CEEEEecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 99999999653 122222 33445 8999999998877776677787777654
No 130
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.31 E-value=1.9e-06 Score=79.57 Aligned_cols=169 Identities=14% Similarity=0.226 Sum_probs=106.4
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--cCccHH-HHHHhhccCCceEEEcccccCccChh
Q 019328 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDVN 103 (342)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~i~~~~--~~~~~~-~~~~~~~l~~k~i~~~g~G~d~id~~ 103 (342)
..++.|.+.+....++ ..+++|+.+.+. +..|+++++.+ ..++++ +++...-- |=+ -|+-.+++-
T Consensus 58 ~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~--KDV----DG~~~~N~G 130 (285)
T 3l07_A 58 ACAQVGIDSQVITLPE-HTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPE--KDV----DGFHPTNVG 130 (285)
T ss_dssp HHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGG--GBT----TCCSHHHHH
T ss_pred HHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCcc--ccc----ccCChhhee
Confidence 4456688776554432 357888877662 14789998764 345544 34433211 211 122212221
Q ss_pred HHHhCCceEEcC-CCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccCh-HHHHHH
Q 019328 104 AANKYGIAVGNT-PGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYA 181 (342)
Q Consensus 104 ~a~~~gI~v~n~-p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~-IG~~vA 181 (342)
.... +. ++ ....++.-++-++ ++ .+.++.||++.|||.|. +|+.+|
T Consensus 131 ~l~~------g~~~~-~~PcTp~gv~~lL----~~---------------------~~i~l~Gk~vvVIG~s~iVG~p~A 178 (285)
T 3l07_A 131 RLQL------RDKKC-LESCTPKGIMTML----RE---------------------YGIKTEGAYAVVVGASNVVGKPVS 178 (285)
T ss_dssp HHHH------TCTTC-CCCHHHHHHHHHH----HH---------------------TTCCCTTCEEEEECCCTTTHHHHH
T ss_pred ehhc------CCCCC-CCCCCHHHHHHHH----HH---------------------hCCCCCCCEEEEECCCchhHHHHH
Confidence 1111 12 33 3345555544322 11 13489999999999998 699999
Q ss_pred HHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHcc
Q 019328 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (342)
Q Consensus 182 ~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~ 261 (342)
+.| ...|++|...+++ ..++++.+++||+|+.+++. .++|..+.
T Consensus 179 ~lL-~~~gAtVtv~hs~----------------------------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~--- 222 (285)
T 3l07_A 179 QLL-LNAKATVTTCHRF----------------------------TTDLKSHTTKADILIVAVGK----PNFITADM--- 222 (285)
T ss_dssp HHH-HHTTCEEEEECTT----------------------------CSSHHHHHTTCSEEEECCCC----TTCBCGGG---
T ss_pred HHH-HHCCCeEEEEeCC----------------------------chhHHHhcccCCEEEECCCC----CCCCCHHH---
Confidence 997 6889999987653 13788999999999999983 45676655
Q ss_pred CCCCcEEEecCCCc
Q 019328 262 MKKEAILVNCSRGP 275 (342)
Q Consensus 262 mk~gailIN~sRG~ 275 (342)
+|||+++||++.-.
T Consensus 223 vk~GavVIDvgi~~ 236 (285)
T 3l07_A 223 VKEGAVVIDVGINH 236 (285)
T ss_dssp SCTTCEEEECCCEE
T ss_pred cCCCcEEEEecccC
Confidence 49999999998654
No 131
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.31 E-value=2e-06 Score=79.91 Aligned_cols=81 Identities=16% Similarity=0.290 Sum_probs=66.9
Q ss_pred cccCCCEEEEEccCh-HHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 161 NLLKGQTVGVIGAGR-IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 161 ~~l~gktvGIiG~G~-IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
.++.|+++.|||.|. +|+.+|+.| ...|++|..++++ ..++.+.+++||+
T Consensus 161 i~l~gk~vvVIG~s~iVG~p~A~lL-~~~gAtVtv~hs~----------------------------t~~L~~~~~~ADI 211 (301)
T 1a4i_A 161 VPIAGRHAVVVGRSKIVGAPMHDLL-LWNNATVTTCHSK----------------------------TAHLDEEVNKGDI 211 (301)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHH-HHTTCEEEEECTT----------------------------CSSHHHHHTTCSE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHH-HhCCCeEEEEECC----------------------------cccHHHHhccCCE
Confidence 589999999999996 699999997 6899999988643 2478899999999
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccC
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI 277 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~v 277 (342)
|+.+++. .++|..+.+ |||+++||+|.-.+-
T Consensus 212 VI~Avg~----p~~I~~~~v---k~GavVIDVgi~~~~ 242 (301)
T 1a4i_A 212 LVVATGQ----PEMVKGEWI---KPGAIVIDCGINYVP 242 (301)
T ss_dssp EEECCCC----TTCBCGGGS---CTTCEEEECCCBC--
T ss_pred EEECCCC----cccCCHHHc---CCCcEEEEccCCCcc
Confidence 9999984 346777664 799999999986643
No 132
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.31 E-value=3.5e-06 Score=76.80 Aligned_cols=105 Identities=16% Similarity=0.163 Sum_probs=75.2
Q ss_pred cCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 163 l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
+.| +++|||.|.+|+.++..| ...|+ +|.+++|+.++. +++. ...+.....++.+.++++|+|+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L-~~~G~~~I~v~nR~~~ka-~~la------------~~~~~~~~~~~~~~~~~aDiVI 171 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYAL-LQMGVKDIWVVNRTIERA-KALD------------FPVKIFSLDQLDEVVKKAKSLF 171 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHH-HHTTCCCEEEEESCHHHH-HTCC------------SSCEEEEGGGHHHHHHTCSEEE
T ss_pred CCC-eEEEECcHHHHHHHHHHH-HHcCCCEEEEEeCCHHHH-HHHH------------HHcccCCHHHHHhhhcCCCEEE
Confidence 578 999999999999999997 57898 899999987642 1110 0111122457888899999999
Q ss_pred EcCCCC--cccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 242 LHPVLD--KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 242 l~lplt--~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
+++|.. ++ ...+..+. ++++.+++++.-+ .+.-|.+|.+.|
T Consensus 172 natp~gm~p~-~~~i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 172 NTTSVGMKGE-ELPVSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp ECSSTTTTSC-CCSCCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred ECCCCCCCCC-CCCCCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 999864 22 22345444 4689999999888 566666666665
No 133
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.31 E-value=1.7e-06 Score=90.10 Aligned_cols=155 Identities=19% Similarity=0.184 Sum_probs=92.0
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHH--H-hhhhhhhccCCCCC--------ccccccCCHHHH
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF--V-TAYGQFLKANGEQP--------VTWKRASSMDEV 233 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~--~-~~~~~~~~~~~~~~--------~~~~~~~~l~el 233 (342)
=++|||||.|.||..+|..++ ..|.+|++||+++....... . ..+.... ..+... .......++ +.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la-~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~-~~G~~~~~~~~~~~~~i~~~~d~-~~ 390 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSA-SKGTPILMKDINEHGIEQGLAEAAKLLVGRV-DKGRMTPAKMAEVLNGIRPTLSY-GD 390 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHH-HTTCCEEEECSSHHHHHHHHHHHHHHHHHHH-TTTSSCHHHHHHHHHHEEEESSS-TT
T ss_pred CCEEEEECCChhhHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHHHHHHHH-hcCCCCHHHHHHHhcCeEEECCH-HH
Confidence 357999999999999999985 66999999999976432110 0 0000000 111100 001123456 66
Q ss_pred hhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEE-ecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCC
Q 019328 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILV-NCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEM 312 (342)
Q Consensus 234 l~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailI-N~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~ 312 (342)
+++||+|+.++|.+.+.+.-+-.+..+.++++++++ |+|. +....+.+.+.. .-.-.++..|. |.. .+
T Consensus 391 ~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt---l~i~~la~~~~~-~~~~ig~hf~~--P~~-----~~ 459 (715)
T 1wdk_A 391 FGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST---ISISLLAKALKR-PENFVGMHFFN--PVH-----MM 459 (715)
T ss_dssp GGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS---SCHHHHGGGCSC-GGGEEEEECCS--STT-----TC
T ss_pred HCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC---CCHHHHHHHhcC-ccceEEEEccC--Ccc-----cC
Confidence 899999999999877766655566777899999997 5543 334456655532 22346667665 322 23
Q ss_pred CceEEcCCCCCCcHHHHHHHHH
Q 019328 313 KNAIVVPHIASASKWTREGMAT 334 (342)
Q Consensus 313 ~nvi~TPHia~~t~~~~~~~~~ 334 (342)
+.+.+.|+- ..+.++.+.+..
T Consensus 460 ~lvevv~g~-~t~~e~~~~~~~ 480 (715)
T 1wdk_A 460 PLVEVIRGE-KSSDLAVATTVA 480 (715)
T ss_dssp CEEEEEECS-SCCHHHHHHHHH
T ss_pred ceEEEEECC-CCCHHHHHHHHH
Confidence 445555442 124455544443
No 134
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.30 E-value=1.8e-06 Score=79.26 Aligned_cols=77 Identities=9% Similarity=0.186 Sum_probs=64.9
Q ss_pred cCCCEEEEEccCh-HHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 163 LKGQTVGVIGAGR-IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 163 l~gktvGIiG~G~-IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
+.||++.|||.|. +|+.+|+.| .+.|++|..++++ ..++++.+++||+|+
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL-~~~gAtVtv~~~~----------------------------t~~L~~~~~~ADIVI 198 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMML-LNRNYTVSVCHSK----------------------------TKDIGSMTRSSKIVV 198 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHH-HHTTCEEEEECTT----------------------------CSCHHHHHHHSSEEE
T ss_pred cCCCEEEEEcCChHHHHHHHHHH-HHCCCeEEEEeCC----------------------------cccHHHhhccCCEEE
Confidence 8999999999986 799999997 6889999988653 147889999999999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
.+++. .++|..+. +|||+++||++.-.
T Consensus 199 ~Avg~----p~~I~~~~---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 199 VAVGR----PGFLNREM---VTPGSVVIDVGINY 225 (276)
T ss_dssp ECSSC----TTCBCGGG---CCTTCEEEECCCEE
T ss_pred ECCCC----CccccHhh---ccCCcEEEEeccCc
Confidence 99984 34677665 49999999998654
No 135
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.30 E-value=6.7e-07 Score=74.10 Aligned_cols=104 Identities=12% Similarity=0.112 Sum_probs=74.6
Q ss_pred ccCCCEEEEEcc----ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcC
Q 019328 162 LLKGQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 162 ~l~gktvGIiG~----G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~s 237 (342)
-.+-++|+|||. |.+|+.+++.| ...|.+|+.+||..... .+...+.+++++.+..
T Consensus 11 l~~p~~IavIGaS~~~g~~G~~~~~~L-~~~G~~V~~vnp~~~~i-------------------~G~~~~~s~~el~~~v 70 (138)
T 1y81_A 11 SKEFRKIALVGASKNPAKYGNIILKDL-LSKGFEVLPVNPNYDEI-------------------EGLKCYRSVRELPKDV 70 (138)
T ss_dssp ---CCEEEEETCCSCTTSHHHHHHHHH-HHTTCEEEEECTTCSEE-------------------TTEECBSSGGGSCTTC
T ss_pred ccCCCeEEEEeecCCCCCHHHHHHHHH-HHCCCEEEEeCCCCCeE-------------------CCeeecCCHHHhCCCC
Confidence 355678999999 99999999998 57888998888864220 1223457899999999
Q ss_pred CEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
|++++++| .+....++. +..+ ...++++++++. ..+++.++.++..+.
T Consensus 71 Dlvii~vp-~~~v~~v~~-~~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 71 DVIVFVVP-PKVGLQVAK-EAVE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp CEEEECSC-HHHHHHHHH-HHHH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred CEEEEEeC-HHHHHHHHH-HHHH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 99999999 466666653 3343 667778887754 256777777765554
No 136
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.29 E-value=1.3e-06 Score=82.24 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=69.5
Q ss_pred cccccCCCEEEEEccChH-HHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCcccc-c-----c--CC
Q 019328 159 VGNLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK-R-----A--SS 229 (342)
Q Consensus 159 ~g~~l~gktvGIiG~G~I-G~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~--~~ 229 (342)
.|.++.|+++.|||.|.| |+.+|+.| .+.|++|..+||+.....+ .+........ . . .+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L-~~~gAtVtv~nR~~~~l~~-----------ra~~la~~~~~~t~~~~t~~~~ 238 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALL-ANDGATVYSVDVNNIQKFT-----------RGESLKLNKHHVEDLGEYSEDL 238 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHH-HTTSCEEEEECSSEEEEEE-----------SCCCSSCCCCEEEEEEECCHHH
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHH-HHCCCEEEEEeCchHHHHh-----------HHHHHhhhcccccccccccHhH
Confidence 456899999999999986 99999997 6899999999987432100 0000000001 1 1 47
Q ss_pred HHHHhhcCCEEEEcCCCCcccccc-cCHhHHccCCCCcEEEecCCC
Q 019328 230 MDEVLREADVISLHPVLDKTTYHL-INKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 230 l~ell~~sDiV~l~lplt~~t~~l-i~~~~l~~mk~gailIN~sRG 274 (342)
+++.+.+||+|+.+++. .++ |..+. +|+|+++||+|.-
T Consensus 239 L~e~l~~ADIVIsAtg~----p~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 239 LKKCSLDSDVVITGVPS----ENYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp HHHHHHHCSEEEECCCC----TTCCBCTTT---SCTTEEEEECSSS
T ss_pred HHHHhccCCEEEECCCC----CcceeCHHH---cCCCeEEEEcCCC
Confidence 88999999999999984 234 66665 4899999999864
No 137
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.29 E-value=7.4e-07 Score=85.14 Aligned_cols=117 Identities=14% Similarity=0.151 Sum_probs=73.1
Q ss_pred EEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhcc-CC-CCCccccccCCHHHHhhcCCEEEEcC
Q 019328 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-NG-EQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 167 tvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
+|||||+|.||..+|..| ...|.+|.+|||++... +...+. +..... .+ ..........+++++++.||+|++++
T Consensus 17 kI~iIG~G~mG~~la~~L-~~~G~~V~~~~r~~~~~-~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav 93 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVL-SKKCREVCVWHMNEEEV-RLVNEK-RENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVI 93 (366)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTEEEEEEECSCHHHH-HHHHHH-TBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECC
T ss_pred eEEEECCCHHHHHHHHHH-HhCCCEEEEEECCHHHH-HHHHHc-CcccccccccccccceeeeCCHHHHHcCCCEEEECC
Confidence 899999999999999998 46789999999986542 221111 000000 00 00111223357888899999999999
Q ss_pred CCCcccccccCHh---HHccCCC-CcEEEecCCCccCC-HHHHHHHHH
Q 019328 245 VLDKTTYHLINKE---RLATMKK-EAILVNCSRGPVID-EVALVEHLK 287 (342)
Q Consensus 245 plt~~t~~li~~~---~l~~mk~-gailIN~sRG~~vd-~~aL~~aL~ 287 (342)
|. ..+..++... ....+++ ++++|+++.|-..+ .+.+.+.+.
T Consensus 94 ~~-~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~ 140 (366)
T 1evy_A 94 PT-QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIG 140 (366)
T ss_dssp CH-HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHT
T ss_pred Ch-HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHH
Confidence 93 4455544321 4445678 99999998775443 223344443
No 138
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.29 E-value=1.7e-06 Score=85.94 Aligned_cols=116 Identities=13% Similarity=0.112 Sum_probs=75.2
Q ss_pred CEEEEEccChHHHHHHHHHHhcC-Cc-EEEEEcCChh----hHHHHHHhhhh----------hhhccCCCCCccccccCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGF-KM-NLIYYDLYQA----TRLEKFVTAYG----------QFLKANGEQPVTWKRASS 229 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~-g~-~V~~~d~~~~----~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 229 (342)
++|||||+|.||..+|..|+ .. |. +|++||+++. .. +....+.. ..++.....+ ......+
T Consensus 19 mkIaVIGlG~mG~~lA~~la-~~~G~~~V~~~D~~~~~~~~kv-~~l~~g~~~i~~~e~gl~~l~~~~~~~g-~l~~ttd 95 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFA-DAPCFEKVLGFQRNSKSSGYKI-EMLNRGESPLKGEEPGLEELIGKVVKAG-KFECTPD 95 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HSTTCCEEEEECCCCTTTTTHH-HHHTTTCCCSSCCGGGHHHHHHHHHHTT-CEEEESC
T ss_pred CEEEEECcCHHHHHHHHHHH-HhCCCCeEEEEECChhHhHHHH-HHHHhcCCCccccCCCHHHHHHhhcccC-CeEEeCc
Confidence 58999999999999999985 56 88 9999999876 32 11111000 0000000000 0111234
Q ss_pred HHHHhhcCCEEEEcCCCCc--------cccccc--CHhHHccCCCCcEEEecCCCccCCHHHHHHH
Q 019328 230 MDEVLREADVISLHPVLDK--------TTYHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEH 285 (342)
Q Consensus 230 l~ell~~sDiV~l~lplt~--------~t~~li--~~~~l~~mk~gailIN~sRG~~vd~~aL~~a 285 (342)
.+.++.||+|++|+|... +...+. -+.....+++|.++|+.|.-++--.+.+.+.
T Consensus 96 -~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ 160 (478)
T 3g79_A 96 -FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQ 160 (478)
T ss_dssp -GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHH
T ss_pred -HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHH
Confidence 678899999999999653 222222 2456677999999999998877666777653
No 139
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.28 E-value=2e-06 Score=79.89 Aligned_cols=173 Identities=21% Similarity=0.228 Sum_probs=107.0
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--cCccHHH-HHHhhccCCceEEEcccccCccCh
Q 019328 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGETL-FAALSRAGGKAFSNMAVGYNNVDV 102 (342)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~i~~~~--~~~~~~~-~~~~~~l~~k~i~~~g~G~d~id~ 102 (342)
+..++.|.+.+....++ ..+++|+.+.+. +..|+++++.+ ..++++. ++...-- |=+ -|+-.+++
T Consensus 60 k~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~--KDV----DG~~~~N~ 132 (300)
T 4a26_A 60 KAAAEVGMASFNVELPE-DISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPH--KDA----DALLPVNV 132 (300)
T ss_dssp HHHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGG--GCT----TCCSHHHH
T ss_pred HHHHHcCCeEEEEECCC-CCCHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcc--ccc----ccCCcceE
Confidence 34556788776554433 357888877662 14789998764 3455443 3332111 210 11111221
Q ss_pred hHHHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccCh-HHHHHH
Q 019328 103 NAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYA 181 (342)
Q Consensus 103 ~~a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~-IG~~vA 181 (342)
-.....+ ..++ ....++.-++-++ ++ .+.++.||++.|||.|. +|+.+|
T Consensus 133 G~l~~g~----~~~~-~~PcTp~gv~~lL----~~---------------------~~i~l~Gk~vvVIG~s~iVG~p~A 182 (300)
T 4a26_A 133 GLLHYKG----REPP-FTPCTAKGVIVLL----KR---------------------CGIEMAGKRAVVLGRSNIVGAPVA 182 (300)
T ss_dssp HHHHCTT----CCCS-CCCHHHHHHHHHH----HH---------------------HTCCCTTCEEEEECCCTTTHHHHH
T ss_pred EEeecCC----CcCC-CCCCCHHHHHHHH----HH---------------------cCCCCCCCEEEEECCCchHHHHHH
Confidence 1111100 0233 3345555544322 11 13489999999999988 699999
Q ss_pred HHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHH--HHhhcCCEEEEcCCCCcccccccCHhHH
Q 019328 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD--EVLREADVISLHPVLDKTTYHLINKERL 259 (342)
Q Consensus 182 ~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--ell~~sDiV~l~lplt~~t~~li~~~~l 259 (342)
+.| ...|++|..++++. .+++ +.+++||+|+.++|. .++|..+.
T Consensus 183 ~lL-~~~gAtVtv~~~~T----------------------------~~l~l~~~~~~ADIVI~Avg~----p~~I~~~~- 228 (300)
T 4a26_A 183 ALL-MKENATVTIVHSGT----------------------------STEDMIDYLRTADIVIAAMGQ----PGYVKGEW- 228 (300)
T ss_dssp HHH-HHTTCEEEEECTTS----------------------------CHHHHHHHHHTCSEEEECSCC----TTCBCGGG-
T ss_pred HHH-HHCCCeEEEEeCCC----------------------------CCchhhhhhccCCEEEECCCC----CCCCcHHh-
Confidence 997 68899999987632 2455 889999999999994 34677655
Q ss_pred ccCCCCcEEEecCCCcc
Q 019328 260 ATMKKEAILVNCSRGPV 276 (342)
Q Consensus 260 ~~mk~gailIN~sRG~~ 276 (342)
+|+|+++||++.-.+
T Consensus 229 --vk~GavVIDvgi~~~ 243 (300)
T 4a26_A 229 --IKEGAAVVDVGTTPV 243 (300)
T ss_dssp --SCTTCEEEECCCEEE
T ss_pred --cCCCcEEEEEeccCC
Confidence 499999999986543
No 140
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.27 E-value=3.4e-06 Score=83.83 Aligned_cols=120 Identities=13% Similarity=0.132 Sum_probs=75.2
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCC--------CccccccCCHHHHhhc
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--------PVTWKRASSMDEVLRE 236 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~ell~~ 236 (342)
..+|+|||+|.||..+|..|+ ..|.+|++||++++.. +........ ....+.. ........++++.++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la-~~G~~V~~~d~~~~~v-~~l~~~~~~-i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~ 84 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLA-DIGHDVFCLDVDQAKI-DILNNGGVP-IHEPGLKEVIARNRSAGRLRFSTDIEAAVAH 84 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHTTCCS-SCCTTHHHHHHHHHHTTCEEEECCHHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHH-hCCCEEEEEECCHHHH-HHHHCCCCC-cCCCCHHHHHHHhcccCCEEEECCHHHHhhc
Confidence 358999999999999999985 6799999999987542 221111000 0000000 0011234578888999
Q ss_pred CCEEEEcCCCCc---------ccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHc
Q 019328 237 ADVISLHPVLDK---------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 237 sDiV~l~lplt~---------~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~ 288 (342)
||+|++|+|... ..+..+ +.....+++++++|+.|.-.+=..+.+.+.+.+
T Consensus 85 aDvviiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 85 GDVQFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CCEEEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 999999999531 222222 345567899999999985444344455555543
No 141
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.26 E-value=2.4e-06 Score=83.66 Aligned_cols=112 Identities=19% Similarity=0.223 Sum_probs=74.9
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHH--------
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV-------- 233 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el-------- 233 (342)
.-+|.++.|||+|.+|..+|..|+ ..|.+|++||+++++. +.... +..+. ....++++
T Consensus 8 ~~~~~~~~ViGlGyvGlp~A~~La-~~G~~V~~~D~~~~kv-~~L~~---------g~~pi---~epgl~~ll~~~~~~g 73 (431)
T 3ojo_A 8 HHHGSKLTVVGLGYIGLPTSIMFA-KHGVDVLGVDINQQTI-DKLQN---------GQISI---EEPGLQEVYEEVLSSG 73 (431)
T ss_dssp ----CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHT---------TCCSS---CCTTHHHHHHHHHHTT
T ss_pred cccCCccEEEeeCHHHHHHHHHHH-HCCCEEEEEECCHHHH-HHHHC---------CCCCc---CCCCHHHHHHhhcccC
Confidence 457899999999999999999985 6799999999997653 22111 10000 11122222
Q ss_pred -------hhcCCEEEEcCCCCcccc--------ccc--CHhHHccCCCCcEEEecCCCccCCHHHHHHHHH
Q 019328 234 -------LREADVISLHPVLDKTTY--------HLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLK 287 (342)
Q Consensus 234 -------l~~sDiV~l~lplt~~t~--------~li--~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~ 287 (342)
+++||+|++|+|...... .+. -+...+.|++|.++|+.|.-++--.+.+.+.+.
T Consensus 74 ~l~~ttd~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~ 144 (431)
T 3ojo_A 74 KLKVSTTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVI 144 (431)
T ss_dssp CEEEESSCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHH
T ss_pred ceEEeCchhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHH
Confidence 357999999999544221 122 245667799999999999888777777777653
No 142
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.25 E-value=2.1e-06 Score=80.49 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=72.1
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcC--ChhhHHHHHHhhhhhhhccCCCCCccccccC--CHHHHhhcCCEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDL--YQATRLEKFVTAYGQFLKANGEQPVTWKRAS--SMDEVLREADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~ell~~sDiV~ 241 (342)
++|+|||+|.||..+|..|+ ..|.+|.+||| +++.. +..... +..... +.......... ++++.++.+|+|+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~-~~g~~V~~~~r~~~~~~~-~~~~~~-~~~~~~-g~~~~~~~~~~~~~~~~~~~~~D~vi 76 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLV-DNGNEVRIWGTEFDTEIL-KSISAG-REHPRL-GVKLNGVEIFWPEQLEKCLENAEVVL 76 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHH-HHCCEEEEECCGGGHHHH-HHHHTT-CCBTTT-TBCCCSEEEECGGGHHHHHTTCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHH-hCCCeEEEEEccCCHHHH-HHHHHh-CcCccc-CccccceEEecHHhHHHHHhcCCEEE
Confidence 37999999999999999984 56889999999 65432 221110 000000 00000001223 6778889999999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCCc---cC-CHHHHHHHHHc
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGP---VI-DEVALVEHLKQ 288 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~---~v-d~~aL~~aL~~ 288 (342)
+++|.. .+..++ ++... +++++++|+++.|- -. ..+.+.+.+.+
T Consensus 77 ~~v~~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 77 LGVSTD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp ECSCGG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred EcCChH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 999943 444443 34445 88999999998775 11 22446666654
No 143
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.23 E-value=1.6e-06 Score=83.22 Aligned_cols=105 Identities=11% Similarity=0.106 Sum_probs=67.4
Q ss_pred CEEEEEccChHHHHHHHHHHhcCC-------cEEEEEcCChh-----hHHHHHHhhhhhhhc--cCCCCCccccccCCHH
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFK-------MNLIYYDLYQA-----TRLEKFVTAYGQFLK--ANGEQPVTWKRASSMD 231 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g-------~~V~~~d~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~ 231 (342)
++|+|||.|.||..+|..|+ ..| .+|.+|||++. .. +.... .+.... .....+.+.....+++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~-~~G~~~~~~~~~V~~~~r~~~~~~~~~~-~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~ 98 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVG-TNAKNNYLFENEVRMWIRDEFVNGERMV-DIINN-KHENTKYLKGVPLPHNIVAHSDLA 98 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHH-HHHHHCTTBCSCEEEECCSCC---CCHH-HHHHH-HCBCTTTSTTCBCCTTEEEESSTH
T ss_pred CEEEEECcCHHHHHHHHHHH-HcCCccCCCCCeEEEEECChhhhhHHHH-HHHHh-cCcccccCCcccCcCCeEEECCHH
Confidence 47999999999999999985 445 78999999865 22 11111 000000 0000011122345788
Q ss_pred HHhhcCCEEEEcCCCCcccccccCHhHHc----cCCCCcEEEecCCCc
Q 019328 232 EVLREADVISLHPVLDKTTYHLINKERLA----TMKKEAILVNCSRGP 275 (342)
Q Consensus 232 ell~~sDiV~l~lplt~~t~~li~~~~l~----~mk~gailIN~sRG~ 275 (342)
++++.||+|++++|. ...+.++ ++... .+++++++|+++.|-
T Consensus 99 ea~~~aDvVilav~~-~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 99 SVINDADLLIFIVPC-QYLESVL-ASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp HHHTTCSEEEECCCH-HHHHHHH-HHHTC---CCCCTTCEEEECCCSC
T ss_pred HHHcCCCEEEEcCCH-HHHHHHH-HHHhhhhhccCCCCCEEEEeCCcc
Confidence 889999999999993 4444443 23334 688899999998873
No 144
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.19 E-value=6.8e-06 Score=77.24 Aligned_cols=95 Identities=19% Similarity=0.309 Sum_probs=66.1
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
..++++|||.|.||+..++.+...++ -+|.+|||+ +. +++.+.+... .+ ...... ++++++++||+|++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a--~~la~~l~~~---~g---~~~~~~-~~~eav~~aDIVi~ 189 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-AS--PEILERIGRR---CG---VPARMA-APADIAAQADIVVT 189 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CC--HHHHHHHHHH---HT---SCEEEC-CHHHHHHHCSEEEE
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HH--HHHHHHHHHh---cC---CeEEEe-CHHHHHhhCCEEEE
Confidence 36799999999999999998754344 479999999 32 2222221100 01 112234 89999999999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
|+|.+ .-++.. +.+|||+.++++|..
T Consensus 190 aT~s~---~pvl~~---~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 190 ATRST---TPLFAG---QALRAGAFVGAIGSS 215 (313)
T ss_dssp CCCCS---SCSSCG---GGCCTTCEEEECCCS
T ss_pred ccCCC---CcccCH---HHcCCCcEEEECCCC
Confidence 99853 345553 457999999999764
No 145
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.18 E-value=1.7e-06 Score=76.93 Aligned_cols=93 Identities=22% Similarity=0.220 Sum_probs=61.1
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEE-EcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
-++|||||+|.||+.+|+.| ...|.+|.+ |||+++.. +.....++ .....+..+.++++|+|+++
T Consensus 23 mmkI~IIG~G~mG~~la~~l-~~~g~~V~~v~~r~~~~~-~~l~~~~g------------~~~~~~~~~~~~~aDvVila 88 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERF-TAAQIPAIIANSRGPASL-SSVTDRFG------------ASVKAVELKDALQADVVILA 88 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHH-HHTTCCEEEECTTCGGGG-HHHHHHHT------------TTEEECCHHHHTTSSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEEECCCHHHH-HHHHHHhC------------CCcccChHHHHhcCCEEEEe
Confidence 36899999999999999998 467889998 99987642 22222111 01122445568899999999
Q ss_pred CCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 244 lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
+|. .....++. .++. .++.++|+++-|-
T Consensus 89 vp~-~~~~~v~~--~l~~-~~~~ivi~~~~g~ 116 (220)
T 4huj_A 89 VPY-DSIADIVT--QVSD-WGGQIVVDASNAI 116 (220)
T ss_dssp SCG-GGHHHHHT--TCSC-CTTCEEEECCCCB
T ss_pred CCh-HHHHHHHH--Hhhc-cCCCEEEEcCCCC
Confidence 992 22232221 1122 3588999998654
No 146
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.17 E-value=1.3e-05 Score=74.77 Aligned_cols=114 Identities=15% Similarity=0.174 Sum_probs=75.6
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
++.|++++|+|.|.+|+.++..| ...|+ +|.+++|+..+. +++.+.++. ... ......++.+.+.++|+|
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L-~~~G~~~V~v~nR~~~ka-~~la~~~~~------~~~-~~~~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSL-LSTAAERIDMANRTVEKA-ERLVREGDE------RRS-AYFSLAEAETRLAEYDII 208 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HTTTCSEEEEECSSHHHH-HHHHHHSCS------SSC-CEECHHHHHHTGGGCSEE
T ss_pred CCCCCEEEEECcHHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HHHHHHhhh------ccC-ceeeHHHHHhhhccCCEE
Confidence 57899999999999999999998 57898 999999987542 222222110 000 011112566778899999
Q ss_pred EEcCCCCcccc--c-ccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 241 SLHPVLDKTTY--H-LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 241 ~l~lplt~~t~--~-li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
+.++|...... . .+. .+.++++.++++++-.+ ..+. |.++.++.
T Consensus 209 In~t~~~~~~~~~~~~i~---~~~l~~~~~v~D~~y~P-~~T~-ll~~A~~~ 255 (297)
T 2egg_A 209 INTTSVGMHPRVEVQPLS---LERLRPGVIVSDIIYNP-LETK-WLKEAKAR 255 (297)
T ss_dssp EECSCTTCSSCCSCCSSC---CTTCCTTCEEEECCCSS-SSCH-HHHHHHHT
T ss_pred EECCCCCCCCCCCCCCCC---HHHcCCCCEEEEcCCCC-CCCH-HHHHHHHC
Confidence 99999764311 1 233 34578999999998853 3444 65555543
No 147
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.17 E-value=1.3e-05 Score=76.49 Aligned_cols=100 Identities=17% Similarity=0.227 Sum_probs=69.6
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
.++++||||.|.+|+.+++.+....+ -+|.+|||++.+. +.+.+.+.. ..+.......++++++++||+|++
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a-~~la~~~~~------~~g~~~~~~~~~~eav~~aDiVi~ 200 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLAT-AKLIANLKE------YSGLTIRRASSVAEAVKGVDIITT 200 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHH-HHHHHHHTT------CTTCEEEECSSHHHHHTTCSEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHH-HHHHHHHHh------ccCceEEEeCCHHHHHhcCCEEEE
Confidence 46799999999999999987643344 4899999997642 333332210 001112335689999999999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
|+|.. ....++.. +.+++|..+++++..
T Consensus 201 aTps~-~~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 201 VTADK-AYATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp CCCCS-SEEEEECG---GGCCTTCEEEECSCC
T ss_pred eccCC-CCCceecH---HHcCCCCEEEECCCC
Confidence 99965 23345543 467899999999853
No 148
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.16 E-value=4.1e-06 Score=75.30 Aligned_cols=69 Identities=10% Similarity=0.149 Sum_probs=54.9
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
.+|||||+|.||.++|+.| +..|.+|.+|++. ++ ++.|| ++++|
T Consensus 7 mkI~IIG~G~~G~sLA~~L-~~~G~~V~~~~~~--------------------------------~~-~~~aD--ilavP 50 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKL-DSVGHYVTVLHAP--------------------------------ED-IRDFE--LVVID 50 (232)
T ss_dssp CEEEEECCSCCCSCHHHHH-HHTTCEEEECSSG--------------------------------GG-GGGCS--EEEEC
T ss_pred cEEEEEeeCHHHHHHHHHH-HHCCCEEEEecCH--------------------------------HH-hccCC--EEEEc
Confidence 5899999999999999998 5679999998862 11 46789 88899
Q ss_pred CCcccccccCHhHHccCCCCcEEEecC
Q 019328 246 LDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~s 272 (342)
.. ....++ .+....+++|+++++++
T Consensus 51 ~~-ai~~vl-~~l~~~l~~g~ivvd~s 75 (232)
T 3dfu_A 51 AH-GVEGYV-EKLSAFARRGQMFLHTS 75 (232)
T ss_dssp SS-CHHHHH-HHHHTTCCTTCEEEECC
T ss_pred HH-HHHHHH-HHHHHhcCCCCEEEEEC
Confidence 65 555554 45666789999999985
No 149
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.15 E-value=3.9e-06 Score=75.30 Aligned_cols=96 Identities=24% Similarity=0.254 Sum_probs=71.4
Q ss_pred EEEEEccChHHHHHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh-hcCCEEEEcC
Q 019328 167 TVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (342)
Q Consensus 167 tvGIiG~G~IG~~vA~~l~~a~g~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~sDiV~l~l 244 (342)
+|||||+|.||+.+++.+. .-|+++ .+||++.+. + . .+.++++++ .++|+|++|+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~-~~g~~lv~v~d~~~~~--~----------------~----~~~~~~~l~~~~~DvVv~~~ 58 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLE-RNGFEIAAILDVRGEH--E----------------K----MVRGIDEFLQREMDVAVEAA 58 (236)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCCC--T----------------T----EESSHHHHTTSCCSEEEECS
T ss_pred EEEEECCCHHHHHHHHHHh-cCCCEEEEEEecCcch--h----------------h----hcCCHHHHhcCCCCEEEECC
Confidence 7999999999999999974 678887 688987421 0 0 246899999 6999999999
Q ss_pred CCCcccccccCHhHHccCCCCcEEEecCCCccCCH---HHHHHHHHcCC
Q 019328 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE---VALVEHLKQNP 290 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~---~aL~~aL~~g~ 290 (342)
|... .. +.....++.|..+|+.+.+..-+. +.|.++.++..
T Consensus 59 ~~~~-~~----~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g 102 (236)
T 2dc1_A 59 SQQA-VK----DYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTG 102 (236)
T ss_dssp CHHH-HH----HHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHC
T ss_pred CHHH-HH----HHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcC
Confidence 9321 11 223456788999999998887666 56777776543
No 150
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.12 E-value=6.2e-06 Score=77.78 Aligned_cols=112 Identities=15% Similarity=0.238 Sum_probs=69.8
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
..+|||||.|.||..+|..|+ .-|.+|.+|+|++... +...+. +......+.. .......++++ ++.+|+|++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~-~~G~~V~~~~r~~~~~-~~l~~~-g~~~~~~~~~-~~~~~~~~~~~-~~~aDvVil~v 88 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLH-ENGEEVILWARRKEIV-DLINVS-HTSPYVEESK-ITVRATNDLEE-IKKEDILVIAI 88 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSHHHH-HHHHHH-SCBTTBTTCC-CCSEEESCGGG-CCTTEEEEECS
T ss_pred CCcEEEECcCHHHHHHHHHHH-hCCCeEEEEeCCHHHH-HHHHHh-CCcccCCCCe-eeEEEeCCHHH-hcCCCEEEEEC
Confidence 458999999999999999984 6689999999986542 221111 0000000000 01123457778 88999999999
Q ss_pred CCCcccccccCHhHHccCC-CCcEEEecCCCccCC-HHHHHHHHH
Q 019328 245 VLDKTTYHLINKERLATMK-KEAILVNCSRGPVID-EVALVEHLK 287 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk-~gailIN~sRG~~vd-~~aL~~aL~ 287 (342)
| +..++.++ ..++ ++.++|+++.|--.+ .+.+.+.+.
T Consensus 89 k-~~~~~~v~-----~~l~~~~~~vv~~~nGi~~~~~~~l~~~~~ 127 (335)
T 1z82_A 89 P-VQYIREHL-----LRLPVKPSMVLNLSKGIEIKTGKRVSEIVE 127 (335)
T ss_dssp C-GGGHHHHH-----TTCSSCCSEEEECCCCCCTTTCCCHHHHHH
T ss_pred C-HHHHHHHH-----HHhCcCCCEEEEEeCCCCCCccCcHHHHHH
Confidence 9 35554443 3344 789999999773332 233444443
No 151
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.11 E-value=1.2e-06 Score=73.20 Aligned_cols=103 Identities=11% Similarity=0.163 Sum_probs=74.1
Q ss_pred CCEEEEEcc----ChHHHHHHHHHHhcCCcEEEEEcCCh--hhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCC
Q 019328 165 GQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQ--ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 165 gktvGIiG~----G~IG~~vA~~l~~a~g~~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sD 238 (342)
-++|+|||. |.+|..+++.| ...|.+|+.+||.. ... .+...+.+++++....|
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L-~~~G~~v~~vnp~~~g~~i-------------------~G~~~~~sl~el~~~~D 72 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYL-LDQGYHVIPVSPKVAGKTL-------------------LGQQGYATLADVPEKVD 72 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHH-HHHTCCEEEECSSSTTSEE-------------------TTEECCSSTTTCSSCCS
T ss_pred CCEEEEECcCCCCCChHHHHHHHH-HHCCCEEEEeCCccccccc-------------------CCeeccCCHHHcCCCCC
Confidence 578999999 89999999997 56788898888865 210 12234568888888999
Q ss_pred EEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEE
Q 019328 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 239 iV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ga 294 (342)
++++++| .+....++. +..+ ...++++++.+. . ++++.+++++..+.-.
T Consensus 73 lvii~vp-~~~v~~v~~-~~~~-~g~~~i~i~~~~--~--~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 73 MVDVFRN-SEAAWGVAQ-EAIA-IGAKTLWLQLGV--I--NEQAAVLAREAGLSVV 121 (145)
T ss_dssp EEECCSC-STHHHHHHH-HHHH-HTCCEEECCTTC--C--CHHHHHHHHTTTCEEE
T ss_pred EEEEEeC-HHHHHHHHH-HHHH-cCCCEEEEcCCh--H--HHHHHHHHHHcCCEEE
Confidence 9999999 466666653 3333 566778887642 2 6778888887665433
No 152
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.11 E-value=3.9e-06 Score=77.70 Aligned_cols=120 Identities=18% Similarity=0.195 Sum_probs=72.7
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCC-CCccccccCCHHHHhh---cCCEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-QPVTWKRASSMDEVLR---EADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ell~---~sDiV~ 241 (342)
++|+|||.|.||..+|..| ...|.+|.+|||++... +...+. +........ ..... ...+.+++.+ .+|+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~r~~~~~-~~~~~~-g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIML-HQGGNDVTLIDQWPAHI-EAIRKN-GLIADFNGEEVVANL-PIFSPEEIDHQNEQVDLII 79 (316)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHHHHH-CEEEEETTEEEEECC-CEECGGGCCTTSCCCSEEE
T ss_pred CeEEEECcCHHHHHHHHHH-HhCCCcEEEEECCHHHH-HHHHhC-CEEEEeCCCeeEecc-eeecchhhcccCCCCCEEE
Confidence 4899999999999999998 46788999999987542 221111 100000000 00000 0113334444 899999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
+++|. ..+..++ ++....+++++++|+++.|- -..+.+.+.+.+.++.
T Consensus 80 ~~v~~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 80 ALTKA-QQLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKENIL 127 (316)
T ss_dssp ECSCH-HHHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGGGEE
T ss_pred EEecc-ccHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCccEE
Confidence 99993 3444444 34556688999999998753 2345666666554443
No 153
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.09 E-value=3.8e-06 Score=76.88 Aligned_cols=97 Identities=10% Similarity=0.069 Sum_probs=64.7
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc--cc-cccCCHHHHhhcCCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TW-KRASSMDEVLREADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~l~ell~~sDiV~l 242 (342)
++|+|||.|.||..+|..| ...|.+|.+|||++... +. +...+..+. .. ....+ .+.++.+|+|++
T Consensus 1 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~r~~~~~-~~--------l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~ 69 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTAL-CKQGHEVQGWLRVPQPY-CS--------VNLVETDGSIFNESLTAND-PDFLATSDLLLV 69 (291)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSCCSE-EE--------EEEECTTSCEEEEEEEESC-HHHHHTCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHH-HhCCCCEEEEEcCccce-ee--------EEEEcCCCceeeeeeeecC-ccccCCCCEEEE
Confidence 3799999999999999998 46789999999986431 10 111110000 00 01233 467789999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
++|.. .+..++ ++....+++++++|++..|-
T Consensus 70 ~v~~~-~~~~v~-~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 70 TLKAW-QVSDAV-KSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp CSCGG-GHHHHH-HHHHTTSCTTSCEEEECSSS
T ss_pred EecHH-hHHHHH-HHHHhhCCCCCEEEEecCCC
Confidence 99954 344444 34556788999999987653
No 154
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.00 E-value=1.2e-06 Score=80.55 Aligned_cols=90 Identities=13% Similarity=0.170 Sum_probs=56.0
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
.+|||||+|.||+.+|+.|+ .. .+| .+||+++... +...+.+ + . ...++++++++||+|++++
T Consensus 3 m~I~iIG~G~mG~~la~~l~-~~-~~v~~v~~~~~~~~-~~~~~~~-------g-----~-~~~~~~~~~~~~DvVilav 66 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLK-DR-YEIGYILSRSIDRA-RNLAEVY-------G-----G-KAATLEKHPELNGVVFVIV 66 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC------CCCEECSSHHHH-HHHHHHT-------C-----C-CCCSSCCCCC---CEEECS
T ss_pred ceEEEEeCCHHHHHHHHHHH-Hc-CcEEEEEeCCHHHH-HHHHHHc-------C-----C-ccCCHHHHHhcCCEEEEeC
Confidence 37999999999999999874 44 788 4899987542 1211111 1 1 2346777888999999999
Q ss_pred CCCcccccccCHhHHccC-CCCcEEEecCCCccC
Q 019328 245 VLDKTTYHLINKERLATM-KKEAILVNCSRGPVI 277 (342)
Q Consensus 245 plt~~t~~li~~~~l~~m-k~gailIN~sRG~~v 277 (342)
|... . .+.+..+ +++.++||++-+-..
T Consensus 67 ~~~~-~-----~~v~~~l~~~~~ivi~~s~~~~~ 94 (276)
T 2i76_A 67 PDRY-I-----KTVANHLNLGDAVLVHCSGFLSS 94 (276)
T ss_dssp CTTT-H-----HHHHTTTCCSSCCEEECCSSSCG
T ss_pred ChHH-H-----HHHHHHhccCCCEEEECCCCCcH
Confidence 9542 2 3444444 689999999865433
No 155
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.99 E-value=3.1e-06 Score=72.59 Aligned_cols=100 Identities=11% Similarity=0.121 Sum_probs=64.3
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCC---HHHH--h
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV--L 234 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el--l 234 (342)
.++.+++++|+|+|.+|+.+|+.| +.. |.+|+++|+++..... .. ..+.... .....+ +.++ +
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L-~~~~g~~V~vid~~~~~~~~-~~--------~~g~~~~-~gd~~~~~~l~~~~~~ 103 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDEL-RARYGKISLGIEIREEAAQQ-HR--------SEGRNVI-SGDATDPDFWERILDT 103 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHH-HHHHCSCEEEEESCHHHHHH-HH--------HTTCCEE-ECCTTCHHHHHTBCSC
T ss_pred cCCCCCcEEEECCCHHHHHHHHHH-HhccCCeEEEEECCHHHHHH-HH--------HCCCCEE-EcCCCCHHHHHhccCC
Confidence 457789999999999999999997 677 9999999998764321 11 1111100 001122 3444 6
Q ss_pred hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 235 ~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.++|+|++++|....+..++ ..++.+.+...+|..+.
T Consensus 104 ~~ad~vi~~~~~~~~~~~~~--~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 104 GHVKLVLLAMPHHQGNQTAL--EQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CCCCEEEECCSSHHHHHHHH--HHHHHTTCCSEEEEEES
T ss_pred CCCCEEEEeCCChHHHHHHH--HHHHHHCCCCEEEEEEC
Confidence 78999999999654443332 35566676666665433
No 156
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.96 E-value=5.7e-05 Score=71.09 Aligned_cols=94 Identities=15% Similarity=0.219 Sum_probs=66.6
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
..+++||||.|.+|+.+++.++...+ -+|.+|||++.+. +++.+.++. .. .... ..++++++ ++|+|++
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a-~~la~~~~~----~~---~~~~-~~~~~e~v-~aDvVi~ 193 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAA-KKFVSYCED----RG---ISAS-VQPAEEAS-RCDVLVT 193 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHH-HHHHHHHHH----TT---CCEE-ECCHHHHT-SSSEEEE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHH-HHHHHHHHh----cC---ceEE-ECCHHHHh-CCCEEEE
Confidence 46799999999999999998754344 5799999997642 333333221 00 1123 56899999 9999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
|+|.. ..++.. +.+++|..+++++.
T Consensus 194 aTp~~---~pv~~~---~~l~~G~~V~~ig~ 218 (322)
T 1omo_A 194 TTPSR---KPVVKA---EWVEEGTHINAIGA 218 (322)
T ss_dssp CCCCS---SCCBCG---GGCCTTCEEEECSC
T ss_pred eeCCC---CceecH---HHcCCCeEEEECCC
Confidence 99953 345543 46789999999963
No 157
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.95 E-value=7.7e-05 Score=70.17 Aligned_cols=159 Identities=10% Similarity=0.079 Sum_probs=100.0
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHH---HhhhhhhhccCCCC---Cc-----cccccCCHHHH
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF---VTAYGQFLKANGEQ---PV-----TWKRASSMDEV 233 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~---~~~~~~~~~~~~~~---~~-----~~~~~~~l~el 233 (342)
-.+|+|||.|.||+.+|..++ ..|++|..||++++...... ...+....+..... .. ......++++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a-~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 468999999999999999975 67999999999876422111 11111111111110 00 01234688999
Q ss_pred hhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCC
Q 019328 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMK 313 (342)
Q Consensus 234 l~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~ 313 (342)
++.||+|+=++|-+-+.++-+-++.=+.++|+++|-.-+.+ +.-..|.+++.. +=.-.++=.|.+-| +..+=
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~-p~r~ig~HffNP~~-----~m~LV 156 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVNPPY-----YIPLV 156 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECSSTT-----TCCEE
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccC-CCcEEEecCCCCcc-----ccchH
Confidence 99999999999988888887777777889999998654444 445677766653 23334443333322 33333
Q ss_pred ceEEcCCCCCCcHHHHHHH
Q 019328 314 NAIVVPHIASASKWTREGM 332 (342)
Q Consensus 314 nvi~TPHia~~t~~~~~~~ 332 (342)
-|+-+|+.+-.|.+....+
T Consensus 157 Eiv~g~~Ts~~~~~~~~~~ 175 (319)
T 3ado_A 157 ELVPHPETSPATVDRTHAL 175 (319)
T ss_dssp EEEECTTCCHHHHHHHHHH
T ss_pred HhcCCCCCcHHHHHHHHHH
Confidence 3777887765554444333
No 158
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.95 E-value=3.6e-05 Score=64.16 Aligned_cols=103 Identities=17% Similarity=0.190 Sum_probs=62.0
Q ss_pred ccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhc-cCCCCCccccccCC---HHHH-h
Q 019328 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK-ANGEQPVTWKRASS---MDEV-L 234 (342)
Q Consensus 160 g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---l~el-l 234 (342)
.....+++|.|+|+|.+|+.+|+.| +..|.+|+++|+++..... ++ ..+.... .....+ +.+. +
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L-~~~g~~V~vid~~~~~~~~---------~~~~~g~~~~-~~d~~~~~~l~~~~~ 82 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLA-SSSGHSVVVVDKNEYAFHR---------LNSEFSGFTV-VGDAAEFETLKECGM 82 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCGGGGGG---------SCTTCCSEEE-ESCTTSHHHHHTTTG
T ss_pred hcccCCCcEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHHHH---------HHhcCCCcEE-EecCCCHHHHHHcCc
Confidence 3567889999999999999999997 6789999999998654211 11 0111000 001112 2232 6
Q ss_pred hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 235 ~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
..+|+|++++|....+. .-....+.+.+...+|-..++.
T Consensus 83 ~~ad~Vi~~~~~~~~~~--~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 83 EKADMVFAFTNDDSTNF--FISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp GGCSEEEECSSCHHHHH--HHHHHHHHTSCCSEEEEECSSG
T ss_pred ccCCEEEEEeCCcHHHH--HHHHHHHHHCCCCeEEEEECCH
Confidence 78999999999533222 2233444455566666665555
No 159
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.94 E-value=8.2e-06 Score=75.77 Aligned_cols=117 Identities=15% Similarity=0.108 Sum_probs=69.2
Q ss_pred CEEEEEccChHHHHHHHHHHhcC-----C-cEEEEEcCChhhHHHHHHhhhhhhhccC-CC-CCccccccCCHHHHhhcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGF-----K-MNLIYYDLYQATRLEKFVTAYGQFLKAN-GE-QPVTWKRASSMDEVLREA 237 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~-----g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~ell~~s 237 (342)
++|+|||.|.||..+|..|+ .. | .+|.+|+| .. ..+.+.+..+...... +. .........+ .+.+..+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~-~~~~~~~g~~~V~~~~r-~~-~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 84 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLA-LRAAATDGLLEVSWIAR-GA-HLEAIRAAGGLRVVTPSRDFLARPTCVTDN-PAEVGTV 84 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHH-HHHHHTTSSEEEEEECC-HH-HHHHHHHHTSEEEECSSCEEEECCSEEESC-HHHHCCE
T ss_pred CEEEEECcCHHHHHHHHHHH-hCccccCCCCCEEEEEc-HH-HHHHHHhcCCeEEEeCCCCeEEecceEecC-ccccCCC
Confidence 48999999999999999985 44 7 89999998 43 2232221011111100 00 0000001123 3457889
Q ss_pred CEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCH-HHHHHHHHcCC
Q 019328 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE-VALVEHLKQNP 290 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~-~aL~~aL~~g~ 290 (342)
|+|++++|... +...+ ++....+++++++|.+.-| ++. +.|.+.+.+.+
T Consensus 85 D~vil~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG--~~~~~~l~~~l~~~~ 134 (317)
T 2qyt_A 85 DYILFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG--ADIAERMRTYLPDTV 134 (317)
T ss_dssp EEEEECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS--SSHHHHHTTTSCTTT
T ss_pred CEEEEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC--CCcHHHHHHHCCCCc
Confidence 99999999543 44433 3344456788999998776 343 55656564433
No 160
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.93 E-value=1.9e-05 Score=72.56 Aligned_cols=106 Identities=16% Similarity=0.047 Sum_probs=72.8
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
|+++.|+|.|.+|+.++..| ...|.+|.+++|+.++. ++.. .++ ... .+++++ .++|+|+.++
T Consensus 118 ~k~vlvlGaGGaaraia~~L-~~~G~~v~V~nRt~~ka-~~la-~~~----------~~~---~~~~~l-~~~DiVInaT 180 (269)
T 3phh_A 118 YQNALILGAGGSAKALACEL-KKQGLQVSVLNRSSRGL-DFFQ-RLG----------CDC---FMEPPK-SAFDLIINAT 180 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSCTTH-HHHH-HHT----------CEE---ESSCCS-SCCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHH-HCC----------CeE---ecHHHh-ccCCEEEEcc
Confidence 89999999999999999998 57889999999997643 2221 111 011 122332 3899999999
Q ss_pred CCCcccccccCHhHHc-cCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 245 VLDKTTYHLINKERLA-TMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 245 plt~~t~~li~~~~l~-~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
|..-.....++.+.+. .++++.+++++.-.+ .+.-|.+|-+.|
T Consensus 181 p~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P--~T~ll~~A~~~G 224 (269)
T 3phh_A 181 SASLHNELPLNKEVLKGYFKEGKLAYDLAYGF--LTPFLSLAKELK 224 (269)
T ss_dssp TTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS--CCHHHHHHHHTT
T ss_pred cCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC--chHHHHHHHHCc
Confidence 9764433346665333 577899999999876 555444555554
No 161
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.91 E-value=7.8e-06 Score=78.42 Aligned_cols=114 Identities=18% Similarity=0.119 Sum_probs=72.1
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
+=++++|+|+|.|.||+.+|+.|+ .. .+|.++||+.++. +++.+.+. ..........+++++++++|+|+
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~-~~-~~V~V~~R~~~~a-~~la~~~~-------~~~~d~~~~~~l~~ll~~~DvVI 82 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLK-DE-FDVYIGDVNNENL-EKVKEFAT-------PLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHT-TT-SEEEEEESCHHHH-HHHTTTSE-------EEECCTTCHHHHHHHHTTCSCEE
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHH-cC-CeEEEEECCHHHH-HHHHhhCC-------eEEEecCCHHHHHHHHhCCCEEE
Confidence 456899999999999999999985 44 8999999987653 22111110 00000112346888999999999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCc
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i 291 (342)
.|+|..-. . .-..+.++.|..+++++-- .-+..+|.+..++..+
T Consensus 83 n~~P~~~~-~----~v~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~ 126 (365)
T 2z2v_A 83 GALPGFLG-F----KSIKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQV 126 (365)
T ss_dssp ECCCHHHH-H----HHHHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTC
T ss_pred ECCChhhh-H----HHHHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCC
Confidence 99884321 1 1133456788899998752 3344566666665544
No 162
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.91 E-value=3.8e-05 Score=62.03 Aligned_cols=95 Identities=12% Similarity=0.188 Sum_probs=57.9
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHH----hhcCCEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV----LREADVI 240 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el----l~~sDiV 240 (342)
+++++|+|+|.+|+.+|+.| ...|.+|.++|+++... +.....++ .... .....+.+.+ +.++|+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L-~~~g~~v~~~d~~~~~~-~~~~~~~~-------~~~~-~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSL-SEKGHDIVLIDIDKDIC-KKASAEID-------ALVI-NGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHCS-------SEEE-ESCTTSHHHHHHTTTTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHH-HHHHHhcC-------cEEE-EcCCCCHHHHHHcCcccCCEE
Confidence 46899999999999999998 57799999999986542 22111111 0000 0011122222 5789999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEec
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~ 271 (342)
++++|.... +..-....+.++++.+++-+
T Consensus 74 i~~~~~~~~--~~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 74 IAVTGKEEV--NLMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp EECCSCHHH--HHHHHHHHHHTTCCCEEEEC
T ss_pred EEeeCCchH--HHHHHHHHHHcCCCEEEEEe
Confidence 999985432 22223445567777666644
No 163
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.87 E-value=1.8e-05 Score=76.32 Aligned_cols=83 Identities=28% Similarity=0.445 Sum_probs=68.9
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHhcCCc---EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 164 KGQTVGVIGA-GRIGSAYARMMVEGFKM---NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 164 ~gktvGIiG~-G~IG~~vA~~l~~a~g~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
...+|-|||. |..|+..++.+ +++|+ .|..+|++...+ + ..++ .+.++|+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a-~~lGa~~~~V~v~D~~~~~~---------------g---------~~~~-~i~~aDi 266 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLL-HKVGIPDANILKWDIKETSR---------------G---------GPFD-EIPQADI 266 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHH-HHTTCCGGGEEEECHHHHTT---------------C---------SCCT-HHHHSSE
T ss_pred CCCeEEEEcCCCHHHHHHHHHH-HhCCCCcCceEEeecccccc---------------C---------Cchh-hHhhCCE
Confidence 4668999999 99999999996 89998 899999865221 0 0123 3568999
Q ss_pred EEEcCCCCcccccccCHhHHccC-CCCcEEEecC
Q 019328 240 ISLHPVLDKTTYHLINKERLATM-KKEAILVNCS 272 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~m-k~gailIN~s 272 (342)
|+.++......-.+|.++.++.| |||+++|++|
T Consensus 267 vIn~vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 267 FINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp EEECCCCCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred EEECcCcCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 99999987778899999999999 9999999996
No 164
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.86 E-value=8.1e-05 Score=71.44 Aligned_cols=103 Identities=14% Similarity=0.226 Sum_probs=76.4
Q ss_pred ccccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCC----hhhH---HHHHHhhhhhhhccCCCCCccccccCCHH
Q 019328 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY----QATR---LEKFVTAYGQFLKANGEQPVTWKRASSMD 231 (342)
Q Consensus 160 g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (342)
|..+.+.+|.|+|.|..|..+|+.| .+.|. +|+.+|++ .... ...+...|.. ... . .....+|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll-~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~---~~~--~--~~~~~~L~ 258 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFL-LDLGVKNVVAVDRKGILNENDPETCLNEYHLEIAR---ITN--P--ERLSGDLE 258 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHH-HHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHH---TSC--T--TCCCSCHH
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHH-HhCCCCeEEEEECCCcccCCCcccccCHHHHHHHH---hhh--c--cCchhhHH
Confidence 3578899999999999999999997 68898 89999998 3221 1111122211 101 0 11246899
Q ss_pred HHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 232 ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
++++.+|+++-+.- -++|.++.++.|+++++++.+|+-.
T Consensus 259 eav~~ADVlIG~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt 297 (388)
T 1vl6_A 259 TALEGADFFIGVSR-----GNILKPEWIKKMSRKPVIFALANPV 297 (388)
T ss_dssp HHHTTCSEEEECSC-----SSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred HHHccCCEEEEeCC-----CCccCHHHHHhcCCCCEEEEcCCCC
Confidence 99999999887731 3899999999999999999999754
No 165
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.82 E-value=5e-05 Score=73.79 Aligned_cols=99 Identities=18% Similarity=0.238 Sum_probs=69.2
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhh-H-HHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT-R-LEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
-|+||||+|||||.-|++=|..| +-.|.+|++--|.... + ...+.. ... .++ ...+.+|++++||+
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNL-RDSGv~V~Vglr~~s~~e~~~S~~~-----A~~-----~Gf-~v~~~~eA~~~ADv 101 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNM-RDSGLDISYALRKEAIAEKRASWRK-----ATE-----NGF-KVGTYEELIPQADL 101 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHH-HHTTCEEEEEECHHHHHTTCHHHHH-----HHH-----TTC-EEEEHHHHGGGCSE
T ss_pred HHcCCEEEEeCCChHhHHHHhHH-HhcCCcEEEEeCCCCcccccchHHH-----HHH-----CCC-EecCHHHHHHhCCE
Confidence 48999999999999999999998 6889998865442210 0 000000 000 112 23579999999999
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
|.+.+|...+ ..++ ++....||+|+.|. .|.|=
T Consensus 102 V~~L~PD~~q-~~vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 102 VINLTPDKQH-SDVV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp EEECSCGGGH-HHHH-HHHGGGSCTTCEEE-ESSCH
T ss_pred EEEeCChhhH-HHHH-HHHHhhCCCCCEEE-ecCcc
Confidence 9999995433 2334 56889999999987 66665
No 166
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.80 E-value=6.9e-05 Score=70.20 Aligned_cols=120 Identities=17% Similarity=0.119 Sum_probs=75.4
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhcc--CCCCCc-cccccCCHHHHhhcCCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA--NGEQPV-TWKRASSMDEVLREADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~l~ell~~sDiV~l 242 (342)
++|+|||.|.||..+|..|+ ..|.+|..|+|+.. +.... .+-.... .+.... ......+++++.+.+|+|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~-~~g~~V~~~~r~~~---~~i~~-~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVil 77 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLA-KTGHCVSVVSRSDY---ETVKA-KGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLL 77 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHH-HTTCEEEEECSTTH---HHHHH-HCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHH-hCCCeEEEEeCChH---HHHHh-CCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEE
Confidence 58999999999999999984 56899999999753 11111 1100110 010000 01123567777668999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccE
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~g 293 (342)
++|... +...+ +.....+++++++|.+.-|= -.++.|.+.+...++.+
T Consensus 78 avK~~~-~~~~l-~~l~~~l~~~t~Iv~~~nGi-~~~~~l~~~~~~~~vl~ 125 (320)
T 3i83_A 78 CIKVVE-GADRV-GLLRDAVAPDTGIVLISNGI-DIEPEVAAAFPDNEVIS 125 (320)
T ss_dssp CCCCCT-TCCHH-HHHTTSCCTTCEEEEECSSS-SCSHHHHHHSTTSCEEE
T ss_pred ecCCCC-hHHHH-HHHHhhcCCCCEEEEeCCCC-ChHHHHHHHCCCCcEEE
Confidence 999543 44332 34445678899999887763 23467777776555443
No 167
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.76 E-value=6.5e-05 Score=69.41 Aligned_cols=113 Identities=17% Similarity=0.139 Sum_probs=73.6
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
++.|+++.|+|.|.+|+.++..| ...|+ +|.+++|+.++. ++..+.++. .. . ....+++++.+++|+|
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L-~~~G~~~v~v~~R~~~~a-~~la~~~~~----~~--~---~~~~~~~~l~~~aDiI 191 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPL-LDQQPASITVTNRTFAKA-EQLAELVAA----YG--E---VKAQAFEQLKQSYDVI 191 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HTTCCSEEEEEESSHHHH-HHHHHHHGG----GS--C---EEEEEGGGCCSCEEEE
T ss_pred CccCCEEEEECchHHHHHHHHHH-HhcCCCeEEEEECCHHHH-HHHHHHhhc----cC--C---eeEeeHHHhcCCCCEE
Confidence 68899999999999999999998 57896 999999987542 222222211 00 0 1122455555889999
Q ss_pred EEcCCCCcccc-cccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 241 SLHPVLDKTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 241 ~l~lplt~~t~-~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
+.++|..-... -.+.. +.++++.+++++.-.+ ..+.-|.+|-+.|
T Consensus 192 InaTp~gm~~~~~~l~~---~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G 237 (281)
T 3o8q_A 192 INSTSASLDGELPAIDP---VIFSSRSVCYDMMYGK-GYTVFNQWARQHG 237 (281)
T ss_dssp EECSCCCC----CSCCG---GGEEEEEEEEESCCCS-SCCHHHHHHHHTT
T ss_pred EEcCcCCCCCCCCCCCH---HHhCcCCEEEEecCCC-ccCHHHHHHHHCC
Confidence 99999764322 12333 3467899999997654 4455444444444
No 168
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.75 E-value=3.2e-05 Score=72.97 Aligned_cols=123 Identities=12% Similarity=0.119 Sum_probs=75.4
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCC-CCCccccccCCHHHHhhcCCEEEEc
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANG-EQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
.++|+|||.|.||..+|..|+ ..|.+|.+|+|.. ..+... ..+......+ ..........++++ ++.+|+|+++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~-~~g~~V~~~~r~~--~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vila 77 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLA-LAGEAINVLARGA--TLQALQ-TAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVA 77 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHH-HTTCCEEEECCHH--HHHHHH-HTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCEEEEEEChH--HHHHHH-HCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEe
Confidence 368999999999999999984 6688999999852 222211 1111110000 00001112346776 4889999999
Q ss_pred CCCCcccccccCHhHHccCCCCcEEEecCCCc------------------cCCHHHHHHHHHcCCccEE
Q 019328 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGP------------------VIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 244 lplt~~t~~li~~~~l~~mk~gailIN~sRG~------------------~vd~~aL~~aL~~g~i~ga 294 (342)
+|. .+++..+ ++....+++++++|.+.-|= +=.++.+.+.+...++.++
T Consensus 78 vk~-~~~~~~~-~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~g 144 (335)
T 3ghy_A 78 VKA-PALESVA-AGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLGC 144 (335)
T ss_dssp CCH-HHHHHHH-GGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEEE
T ss_pred CCc-hhHHHHH-HHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEEEE
Confidence 994 4454433 23344578899999998882 2234567777765555433
No 169
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.75 E-value=0.00029 Score=64.46 Aligned_cols=113 Identities=15% Similarity=0.107 Sum_probs=71.0
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh-hcCCEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~sDiV 240 (342)
++.|+++.|+|.|.+|+.+|+.| ...|.+|++++|+.++. ++..+.++. .. .. ...+++++. .++|+|
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L-~~~G~~V~v~~R~~~~~-~~la~~~~~----~~--~~---~~~~~~~~~~~~~Div 184 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPL-LSLDCAVTITNRTVSRA-EELAKLFAH----TG--SI---QALSMDELEGHEFDLI 184 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSHHHH-HHHHHHTGG----GS--SE---EECCSGGGTTCCCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHcCCEEEEEECCHHHH-HHHHHHhhc----cC--Ce---eEecHHHhccCCCCEE
Confidence 57799999999999999999998 57889999999987542 222222211 00 00 112333443 589999
Q ss_pred EEcCCCCcccc-cccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 241 SLHPVLDKTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 241 ~l~lplt~~t~-~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
+.++|...... .-+..+ .++++.+++|+.-.. ..+.-+.++-+.|
T Consensus 185 Vn~t~~~~~~~~~~i~~~---~l~~~~~v~D~~y~p-~~t~~~~~a~~~G 230 (271)
T 1nyt_A 185 INATSSGISGDIPAIPSS---LIHPGIYCYDMFYQK-GKTPFLAWCEQRG 230 (271)
T ss_dssp EECCSCGGGTCCCCCCGG---GCCTTCEEEESCCCS-SCCHHHHHHHHTT
T ss_pred EECCCCCCCCCCCCCCHH---HcCCCCEEEEeccCC-cCCHHHHHHHHcC
Confidence 99999654310 013322 357899999998765 3334344444444
No 170
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.74 E-value=0.00014 Score=67.84 Aligned_cols=121 Identities=12% Similarity=0.119 Sum_probs=74.2
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccC-CCCCc-cccccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKAN-GEQPV-TWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~l~ell~~sDiV~l~ 243 (342)
++|+|||.|.||..+|..|+ ..|.+|..|+|+.. +... ..+...... +.... ......+.++ ++.+|+|+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~-~~g~~V~~~~r~~~---~~i~-~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vila 76 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQ-RSGEDVHFLLRRDY---EAIA-GNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVG 76 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHH-HTSCCEEEECSTTH---HHHH-HTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHH-HCCCeEEEEEcCcH---HHHH-hCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEe
Confidence 57999999999999999984 56889999999752 2211 111111110 00000 0111245555 5789999999
Q ss_pred CCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEE
Q 019328 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVG 295 (342)
Q Consensus 244 lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaa 295 (342)
+|.. +++..+ ++.-..+++++++|.+.-|= -.++.|.+.+...++.++.
T Consensus 77 vk~~-~~~~~l-~~l~~~l~~~~~iv~l~nGi-~~~~~l~~~~~~~~v~~~~ 125 (312)
T 3hn2_A 77 LKTF-ANSRYE-ELIRPLVEEGTQILTLQNGL-GNEEALATLFGAERIIGGV 125 (312)
T ss_dssp CCGG-GGGGHH-HHHGGGCCTTCEEEECCSSS-SHHHHHHHHTCGGGEEEEE
T ss_pred cCCC-CcHHHH-HHHHhhcCCCCEEEEecCCC-CcHHHHHHHCCCCcEEEEE
Confidence 9943 334332 34445678899999988772 2256677777665655543
No 171
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.73 E-value=7.2e-05 Score=70.07 Aligned_cols=117 Identities=18% Similarity=0.265 Sum_probs=69.4
Q ss_pred cCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCC-CCCccccccCCHHHHhhcCCEEE
Q 019328 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANG-EQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 163 l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
-..++|+|||.|.||..+|..|+ ..|.+|..| ++++. .+...+ .+......+ ..........++++ ++.+|+|+
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~-~~G~~V~l~-~~~~~-~~~i~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vi 91 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLA-RAGHEVILI-ARPQH-VQAIEA-TGLRLETQSFDEQVKVSASSDPSA-VQGADLVL 91 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHH-HTTCEEEEE-CCHHH-HHHHHH-HCEEEECSSCEEEECCEEESCGGG-GTTCSEEE
T ss_pred ccCCcEEEECcCHHHHHHHHHHH-HCCCeEEEE-EcHhH-HHHHHh-CCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEE
Confidence 45678999999999999999984 678999999 66543 222111 111011000 00001111245554 58899999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHH
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLK 287 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~ 287 (342)
+++|.. +++..+ ++....+++++++|.+.-|=- .++.+.+.+.
T Consensus 92 lavk~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi~-~~~~l~~~~~ 134 (318)
T 3hwr_A 92 FCVKST-DTQSAA-LAMKPALAKSALVLSLQNGVE-NADTLRSLLE 134 (318)
T ss_dssp ECCCGG-GHHHHH-HHHTTTSCTTCEEEEECSSSS-HHHHHHHHCC
T ss_pred EEcccc-cHHHHH-HHHHHhcCCCCEEEEeCCCCC-cHHHHHHHcC
Confidence 999954 454443 334456788999999877732 2345666664
No 172
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.73 E-value=7.8e-05 Score=68.38 Aligned_cols=114 Identities=14% Similarity=0.133 Sum_probs=70.3
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-cCCEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~sDiV 240 (342)
++.|+++.|+|.|.+|+.++..| ...|.+|.+++|+.++. +++.+.++.. . .. ...+++++.+ ++|+|
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L-~~~G~~v~v~~R~~~~a-~~l~~~~~~~----~--~~---~~~~~~~~~~~~~Div 184 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPL-LQAQQNIVLANRTFSKT-KELAERFQPY----G--NI---QAVSMDSIPLQTYDLV 184 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHH-HHTTCEEEEEESSHHHH-HHHHHHHGGG----S--CE---EEEEGGGCCCSCCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCEEEEEECCHHHH-HHHHHHcccc----C--Ce---EEeeHHHhccCCCCEE
Confidence 57889999999999999999998 47789999999987542 2222222110 0 00 0123344433 89999
Q ss_pred EEcCCCCccccc-ccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 241 SLHPVLDKTTYH-LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 241 ~l~lplt~~t~~-li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
+.++|......- -+..+. ++++.+++++.-.+..++.-+.+|-+.|
T Consensus 185 In~t~~~~~~~~~~i~~~~---l~~~~~v~D~~y~p~~~t~ll~~a~~~G 231 (272)
T 1p77_A 185 INATSAGLSGGTASVDAEI---LKLGSAFYDMQYAKGTDTPFIALCKSLG 231 (272)
T ss_dssp EECCCC-------CCCHHH---HHHCSCEEESCCCTTSCCHHHHHHHHTT
T ss_pred EECCCCCCCCCCCCCCHHH---cCCCCEEEEeeCCCCcCCHHHHHHHHcC
Confidence 999996543110 133333 3578888888876655455454444444
No 173
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.72 E-value=5e-05 Score=62.29 Aligned_cols=94 Identities=14% Similarity=0.120 Sum_probs=59.2
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCH---HHH-hhcCCEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM---DEV-LREADVI 240 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~el-l~~sDiV 240 (342)
..++.|+|+|.+|+.+|+.| +..|.+|+++|+++..... .. ..+.... .....+. .++ +.++|+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L-~~~g~~v~vid~~~~~~~~-~~--------~~g~~~i-~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKL-LASDIPLVVIETSRTRVDE-LR--------ERGVRAV-LGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHH-HHTTCCEEEEESCHHHHHH-HH--------HTTCEEE-ESCTTSHHHHHHTTGGGCSEE
T ss_pred CCCEEEECcCHHHHHHHHHH-HHCCCCEEEEECCHHHHHH-HH--------HcCCCEE-ECCCCCHHHHHhcCcccCCEE
Confidence 35799999999999999998 6889999999998764321 11 1111100 0011222 221 4689999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEec
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~ 271 (342)
++++|...++..+ ...++.+.++..+|-.
T Consensus 76 i~~~~~~~~n~~~--~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 76 ILTIPNGYEAGEI--VASARAKNPDIEIIAR 104 (140)
T ss_dssp EECCSCHHHHHHH--HHHHHHHCSSSEEEEE
T ss_pred EEECCChHHHHHH--HHHHHHHCCCCeEEEE
Confidence 9999966555433 2345556666666643
No 174
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.71 E-value=0.00011 Score=68.12 Aligned_cols=109 Identities=19% Similarity=0.307 Sum_probs=67.4
Q ss_pred CCEEEEEccChHHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 165 GQTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 165 gktvGIiG~G~IG~~-vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
-.++||||+|.||+. .++.+.+.-+.++. ++|+++... +.+.+.++ ...+.++++++++.|+|++
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~~------------~~~~~~~~~ll~~~D~V~i 72 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKR-EKICSDYR------------IMPFDSIESLAKKCDCIFL 72 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHH-HHHHHHHT------------CCBCSCHHHHHTTCSEEEE
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHH-HHHHHHcC------------CCCcCCHHHHHhcCCEEEE
Confidence 368999999999996 88876433577877 689987642 22222222 1125799999999999999
Q ss_pred cCCCCcccccccCHhHHccCCCCc-EEEe-cCCCccCCHHHHHHHHHcCCc
Q 019328 243 HPVLDKTTYHLINKERLATMKKEA-ILVN-CSRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~ga-ilIN-~sRG~~vd~~aL~~aL~~g~i 291 (342)
++|.. ...-+ ....++.|. +|+. -.--.+-+.+.|.++.++..+
T Consensus 73 ~tp~~--~h~~~---~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~ 118 (308)
T 3uuw_A 73 HSSTE--THYEI---IKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNL 118 (308)
T ss_dssp CCCGG--GHHHH---HHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTC
T ss_pred eCCcH--hHHHH---HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCC
Confidence 99933 22212 222333443 4443 223333455667777766443
No 175
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.69 E-value=4.7e-05 Score=59.54 Aligned_cols=96 Identities=18% Similarity=0.129 Sum_probs=58.4
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
.+++++|+|.|.||+.+++.| ...| .+|+++++++..... .. ..+... .........++.++++++|+|+.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l-~~~g~~~v~~~~r~~~~~~~-~~-~~~~~~-----~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALL-KTSSNYSVTVADHDLAALAV-LN-RMGVAT-----KQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHH-HHCSSEEEEEEESCHHHHHH-HH-TTTCEE-----EECCTTCHHHHHHHTTTCSEEEE
T ss_pred CcCeEEEECCCHHHHHHHHHH-HhCCCceEEEEeCCHHHHHH-HH-hCCCcE-----EEecCCCHHHHHHHHcCCCEEEE
Confidence 467999999999999999997 5778 899999998754221 11 000000 00001112346677889999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecC
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~s 272 (342)
+.|... +..++ -...+.|...++.+
T Consensus 76 ~~~~~~-~~~~~----~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 76 AAPFFL-TPIIA----KAAKAAGAHYFDLT 100 (118)
T ss_dssp CSCGGG-HHHHH----HHHHHTTCEEECCC
T ss_pred CCCchh-hHHHH----HHHHHhCCCEEEec
Confidence 998332 11111 11124566667664
No 176
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.65 E-value=0.00011 Score=70.83 Aligned_cols=103 Identities=12% Similarity=0.007 Sum_probs=61.8
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEc---CChhhHHHHHHhhhhhhhc--cCCC--CC--ccc-cccCCHHHHhh
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD---LYQATRLEKFVTAYGQFLK--ANGE--QP--VTW-KRASSMDEVLR 235 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d---~~~~~~~~~~~~~~~~~~~--~~~~--~~--~~~-~~~~~l~ell~ 235 (342)
++|+|||.|.||..+|..|++.-|.+|.+|+ +++... +......+..+. ..+. .. ... ....+++++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 81 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERW-TKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAIS 81 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHH-HHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHH-HHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhC
Confidence 4899999999999999997422489999999 543321 111111000000 0000 00 001 12357888899
Q ss_pred cCCEEEEcCCCCcccccccCHhHHccCCCCcEEEec
Q 019328 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~ 271 (342)
.||+|++++|.. ..+.++ ++....+++++++++.
T Consensus 82 ~aD~Vilav~~~-~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 82 GADVVILTVPAF-AHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp TCSEEEECSCGG-GHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCCEEEEeCchH-HHHHHH-HHHHhhCCCCcEEEEc
Confidence 999999999943 333332 3344557889999984
No 177
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.63 E-value=0.00027 Score=69.32 Aligned_cols=149 Identities=13% Similarity=0.089 Sum_probs=85.5
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhh--------hhhccCCCCCccccccCCHHHHhh
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYG--------QFLKANGEQPVTWKRASSMDEVLR 235 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~ell~ 235 (342)
+-++|+|||+|-+|..+|..++ ..|.+|+++|.++++- +....+.. +.++..... -......+.++.++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A-~~G~~V~g~Did~~kV-~~ln~G~~pi~Epgl~ell~~~~~~-g~l~~tt~~~~ai~ 96 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFA-LLGHRVVGYDVNPSIV-ERLRAGRPHIYEPGLEEALGRALSS-GRLSFAESAEEAVA 96 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HHTCEEEEECSCHHHH-HHHHTTCCSSCCTTHHHHHHHHHHT-TCEEECSSHHHHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHH-hCCCcEEEEECCHHHH-HHHHCCCCCCCCCCHHHHHHHHHHc-CCeeEEcCHHHHHh
Confidence 4579999999999999999884 5799999999987542 11111000 000000000 00122457889999
Q ss_pred cCCEEEEcCCCCcccc-cccC--------HhHHccCC---CCcEEEecCCCccCCHHHHH-HHHHcCCccEEEee-cCCC
Q 019328 236 EADVISLHPVLDKTTY-HLIN--------KERLATMK---KEAILVNCSRGPVIDEVALV-EHLKQNPMFRVGLD-VFED 301 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~-~li~--------~~~l~~mk---~gailIN~sRG~~vd~~aL~-~aL~~g~i~gaalD-V~~~ 301 (342)
.||++++|+| ||... +-.| +..-+.|+ +|.++|.-|+-.+=-.+.+. ..|++. -.+.-++ +|.+
T Consensus 97 ~ad~~~I~Vp-TP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~-~~~~~f~v~~~P 174 (444)
T 3vtf_A 97 ATDATFIAVG-TPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEE-AGGVKFSVASNP 174 (444)
T ss_dssp TSSEEEECCC-CCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTT-TTTCCCEEEECC
T ss_pred cCCceEEEec-CCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHh-CCCCCceeecCc
Confidence 9999999998 44322 1111 12223343 68899999987775555544 344432 2222222 2456
Q ss_pred CCCCC-C---CccCCCceEE
Q 019328 302 EPYMK-P---GLSEMKNAIV 317 (342)
Q Consensus 302 EP~~~-~---~L~~~~nvi~ 317 (342)
|-+.+ . .+.+.++|++
T Consensus 175 Erl~eG~a~~d~~~~~riVi 194 (444)
T 3vtf_A 175 EFLREGSALEDFFKPDRIVI 194 (444)
T ss_dssp CCCCTTSHHHHHHSCSCEEE
T ss_pred ccccCCccccccccCCcEEE
Confidence 65432 2 4666677763
No 178
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.58 E-value=0.00026 Score=66.36 Aligned_cols=67 Identities=24% Similarity=0.417 Sum_probs=49.6
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV~l 242 (342)
.+|||||+|.||+..++.+.+.-++++. ++|+++... +.+.+.+ +.. +.+++++++ +.|+|++
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~~------------~~~-~~~~~~~l~~~~~D~V~i 69 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAA-EAIAGAY------------GCE-VRTIDAIEAAADIDAVVI 69 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHHT------------TCE-ECCHHHHHHCTTCCEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHH-HHHHHHh------------CCC-cCCHHHHhcCCCCCEEEE
Confidence 4899999999999999987433478877 689987542 2222222 112 579999998 8999999
Q ss_pred cCCC
Q 019328 243 HPVL 246 (342)
Q Consensus 243 ~lpl 246 (342)
++|.
T Consensus 70 ~tp~ 73 (331)
T 4hkt_A 70 CTPT 73 (331)
T ss_dssp CSCG
T ss_pred eCCc
Confidence 9994
No 179
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.57 E-value=0.00047 Score=63.69 Aligned_cols=119 Identities=18% Similarity=0.200 Sum_probs=75.9
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
++.||++.|+|.|.+|+.++..| ...|+ +|.+++|+.++. ++..+.+.... ...........++++.++++|+|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L-~~~G~~~v~i~~R~~~~a-~~la~~~~~~~---~~~~i~~~~~~~l~~~l~~~DiV 198 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYAL-VTHGVQKLQVADLDTSRA-QALADVINNAV---GREAVVGVDARGIEDVIAAADGV 198 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSSHHHH-HHHHHHHHHHH---TSCCEEEECSTTHHHHHHHSSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEECCHHHH-HHHHHHHHhhc---CCceEEEcCHHHHHHHHhcCCEE
Confidence 57899999999999999999998 57898 799999997642 22222221100 00011111234788889999999
Q ss_pred EEcCCCCcccc--cccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 241 SLHPVLDKTTY--HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 241 ~l~lplt~~t~--~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
+.+.|..-... -.+. .+.++++.+++++.=.+ ..+.-|.+|-+.|
T Consensus 199 InaTp~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P-~~T~ll~~A~~~G 245 (283)
T 3jyo_A 199 VNATPMGMPAHPGTAFD---VSCLTKDHWVGDVVYMP-IETELLKAARALG 245 (283)
T ss_dssp EECSSTTSTTSCSCSSC---GGGCCTTCEEEECCCSS-SSCHHHHHHHHHT
T ss_pred EECCCCCCCCCCCCCCC---HHHhCCCCEEEEecCCC-CCCHHHHHHHHCc
Confidence 99999642211 1233 34467888888886543 3455555555555
No 180
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.57 E-value=0.00016 Score=58.37 Aligned_cols=100 Identities=11% Similarity=0.149 Sum_probs=58.6
Q ss_pred cCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCH---HHH-hhcCC
Q 019328 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM---DEV-LREAD 238 (342)
Q Consensus 163 l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~el-l~~sD 238 (342)
+.++++.|+|+|.+|+.+++.| ...|.+|+++|+++.... . +...+.. .......+. +++ +.++|
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l-~~~g~~v~~~d~~~~~~~-~--------~~~~~~~-~~~~d~~~~~~l~~~~~~~~d 72 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKEL-HRMGHEVLAVDINEEKVN-A--------YASYATH-AVIANATEENELLSLGIRNFE 72 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHH-HHTTCCCEEEESCHHHHH-T--------TTTTCSE-EEECCTTCHHHHHTTTGGGCS
T ss_pred CcCCcEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHH-H--------HHHhCCE-EEEeCCCCHHHHHhcCCCCCC
Confidence 5678899999999999999997 578999999999765321 1 0111110 000011222 232 57899
Q ss_pred EEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 239 iV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
+|+.++|...++ ++.-....+.+.+. .+|-.+.+.
T Consensus 73 ~vi~~~~~~~~~-~~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 73 YVIVAIGANIQA-STLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp EEEECCCSCHHH-HHHHHHHHHHTTCS-EEEEECCSH
T ss_pred EEEECCCCchHH-HHHHHHHHHHcCCC-eEEEEeCCH
Confidence 999999854222 22223344556666 455444443
No 181
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.55 E-value=0.00016 Score=59.65 Aligned_cols=104 Identities=13% Similarity=0.144 Sum_probs=69.7
Q ss_pred CCCEEEEEcc----ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 164 KGQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 164 ~gktvGIiG~----G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
+-++|+|||. |++|..+++.| +..|.+|+..+|..... .. .+...+.+++++-...|+
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l-~~~G~~v~~vnp~~~~~---------------~i--~G~~~~~sl~el~~~vDl 73 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYL-REQGYRVLPVNPRFQGE---------------EL--FGEEAVASLLDLKEPVDI 73 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHH-HHTTCEEEEECGGGTTS---------------EE--TTEECBSSGGGCCSCCSE
T ss_pred CCCEEEEECCCCCCCChHHHHHHHH-HHCCCEEEEeCCCcccC---------------cC--CCEEecCCHHHCCCCCCE
Confidence 3568999999 89999999997 67888877666641010 00 122345688998889999
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
+++++|. +....++. +..+ ...++++++.+.. ++.+.+..++..+.
T Consensus 74 avi~vp~-~~~~~v~~-~~~~-~gi~~i~~~~g~~----~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 74 LDVFRPP-SALMDHLP-EVLA-LRPGLVWLQSGIR----HPEFEKALKEAGIP 119 (140)
T ss_dssp EEECSCH-HHHTTTHH-HHHH-HCCSCEEECTTCC----CHHHHHHHHHTTCC
T ss_pred EEEEeCH-HHHHHHHH-HHHH-cCCCEEEEcCCcC----HHHHHHHHHHcCCE
Confidence 9999995 55566553 3333 3334676664432 57777777766554
No 182
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.54 E-value=0.00061 Score=62.57 Aligned_cols=113 Identities=12% Similarity=0.029 Sum_probs=72.7
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh-hcCC
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READ 238 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~sD 238 (342)
.++.||++.|+|.|.+|+.++..| ...|+ +|.+++|+.++. ++..+.+.. .... ..+++++- .++|
T Consensus 116 ~~l~~k~~lvlGaGg~~~aia~~L-~~~G~~~v~i~~R~~~~a-~~la~~~~~-------~~~~---~~~~~~l~~~~~D 183 (272)
T 3pwz_A 116 EPLRNRRVLLLGAGGAVRGALLPF-LQAGPSELVIANRDMAKA-LALRNELDH-------SRLR---ISRYEALEGQSFD 183 (272)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTCCSEEEEECSCHHHH-HHHHHHHCC-------TTEE---EECSGGGTTCCCS
T ss_pred CCccCCEEEEECccHHHHHHHHHH-HHcCCCEEEEEeCCHHHH-HHHHHHhcc-------CCee---EeeHHHhcccCCC
Confidence 368899999999999999999998 57896 999999987642 222222210 0011 12333433 7899
Q ss_pred EEEEcCCCCcccc-cccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 239 VISLHPVLDKTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 239 iV~l~lplt~~t~-~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
+|+.++|..-... -.+.. +.++++.+++++.=.+ ..+.-|.+|-+.|
T Consensus 184 ivInaTp~gm~~~~~~i~~---~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G 231 (272)
T 3pwz_A 184 IVVNATSASLTADLPPLPA---DVLGEAALAYELAYGK-GLTPFLRLAREQG 231 (272)
T ss_dssp EEEECSSGGGGTCCCCCCG---GGGTTCSEEEESSCSC-CSCHHHHHHHHHS
T ss_pred EEEECCCCCCCCCCCCCCH---HHhCcCCEEEEeecCC-CCCHHHHHHHHCC
Confidence 9999999643211 12333 3457889999986653 3455444555544
No 183
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.52 E-value=0.00034 Score=64.85 Aligned_cols=78 Identities=22% Similarity=0.285 Sum_probs=63.2
Q ss_pred cccCCCEEEEEccChH-HHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 161 NLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 161 ~~l~gktvGIiG~G~I-G~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
.++.||++.|||-++| |+++|..| ..-++.|..+..+ ..++.+..++||+
T Consensus 175 i~l~Gk~vvViGRS~iVGkPla~LL-~~~~ATVTi~Hs~----------------------------T~dl~~~~~~ADI 225 (303)
T 4b4u_A 175 IEIAGKHAVVVGRSAILGKPMAMML-LQANATVTICHSR----------------------------TQNLPELVKQADI 225 (303)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHH-HHTTCEEEEECTT----------------------------CSSHHHHHHTCSE
T ss_pred CCCCCCEEEEEeccccccchHHHHH-HhcCCEEEEecCC----------------------------CCCHHHHhhcCCe
Confidence 5899999999998665 99999997 5779999876532 2478899999999
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
|+.++.- .++|..+. .|+|+++||+|--
T Consensus 226 vV~A~G~----p~~i~~d~---vk~GavVIDVGin 253 (303)
T 4b4u_A 226 IVGAVGK----AELIQKDW---IKQGAVVVDAGFH 253 (303)
T ss_dssp EEECSCS----TTCBCGGG---SCTTCEEEECCCB
T ss_pred EEeccCC----CCcccccc---ccCCCEEEEecee
Confidence 9999763 35677665 5899999999853
No 184
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.50 E-value=0.00014 Score=59.19 Aligned_cols=93 Identities=14% Similarity=0.098 Sum_probs=55.1
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHH----hhcCCE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV----LREADV 239 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el----l~~sDi 239 (342)
.++++.|+|+|.+|+.+|+.| ...|.+|+++|+++..... ... .+.... .....+.+.+ +.++|+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L-~~~g~~V~~id~~~~~~~~-~~~--------~~~~~~-~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVREL-TAAGKKVLAVDKSKEKIEL-LED--------EGFDAV-IADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHH-HHTTCCEEEEESCHHHHHH-HHH--------TTCEEE-ECCTTCHHHHHHSCCTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEECCHHHHHH-HHH--------CCCcEE-ECCCCCHHHHHhCCcccCCE
Confidence 457899999999999999998 5789999999998754221 111 111000 0011222222 467999
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCcEEE
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEAILV 269 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~gailI 269 (342)
|++++|.. ..++.-....+.+....++.
T Consensus 74 vi~~~~~~--~~n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 74 VLITGSDD--EFNLKILKALRSVSDVYAIV 101 (141)
T ss_dssp EEECCSCH--HHHHHHHHHHHHHCCCCEEE
T ss_pred EEEecCCH--HHHHHHHHHHHHhCCceEEE
Confidence 99999932 23333334444444333444
No 185
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.47 E-value=0.0005 Score=64.46 Aligned_cols=120 Identities=13% Similarity=0.095 Sum_probs=73.9
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCC---hhhHHHHHHhhhhhhhccCCCCCccccccC---CHHHH
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY---QATRLEKFVTAYGQFLKANGEQPVTWKRAS---SMDEV 233 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~el 233 (342)
.++.||++.|+|.|.+|+.++..| ...|+ +|.+++|+ ..+ .++..+.+... .+ ......... ++.+.
T Consensus 150 ~~l~gk~~lVlGaGG~g~aia~~L-~~~Ga~~V~i~nR~~~~~~~-a~~la~~~~~~---~~-~~~~~~~~~~~~~l~~~ 223 (315)
T 3tnl_A 150 HDIIGKKMTICGAGGAATAICIQA-ALDGVKEISIFNRKDDFYAN-AEKTVEKINSK---TD-CKAQLFDIEDHEQLRKE 223 (315)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTTCSEEEEEECSSTTHHH-HHHHHHHHHHH---SS-CEEEEEETTCHHHHHHH
T ss_pred CCccCCEEEEECCChHHHHHHHHH-HHCCCCEEEEEECCCchHHH-HHHHHHHhhhh---cC-CceEEeccchHHHHHhh
Confidence 368899999999999999999998 57898 89999998 432 22222222110 00 001111122 35567
Q ss_pred hhcCCEEEEcCCCCc--cc-ccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 234 LREADVISLHPVLDK--TT-YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 234 l~~sDiV~l~lplt~--~t-~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
++++|+|+.+.|..- .+ ...+. ....++++.+++++.=.+ ..+.-|.+|-+.|
T Consensus 224 l~~aDiIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G 279 (315)
T 3tnl_A 224 IAESVIFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKP-TKTRLLEIAEEQG 279 (315)
T ss_dssp HHTCSEEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSS-SSCHHHHHHHHTT
T ss_pred hcCCCEEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCC-CCCHHHHHHHHCC
Confidence 889999999999542 11 11121 233467888888886544 3444455555544
No 186
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.43 E-value=0.0004 Score=64.82 Aligned_cols=124 Identities=16% Similarity=0.190 Sum_probs=69.5
Q ss_pred CEEEEEccChHHHHHHHHHHhc-CCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a-~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
.+|+|||.|.+|..+|..|++. +|.+|..||++.+... .............. .........++++ ++.||+|++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~-~~~~~l~~~~~~~~-~~~~i~~t~d~~~-l~~aDvViiav 77 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQ-GKALDMYESGPVGL-FDTKVTGSNDYAD-TANSDIVIITA 77 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHH-HHHHHHHTTHHHHT-CCCEEEEESCGGG-GTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHH-HHHHhHHhhhhccc-CCcEEEECCCHHH-HCCCCEEEEeC
Confidence 3799999999999999987643 6889999999865321 11111100000000 0111122256766 89999999999
Q ss_pred CCCcccccc-------cC----Hh---HHccCCCCcEEEecCCCccCCHH--HHHHH--HHcCCccEEE
Q 019328 245 VLDKTTYHL-------IN----KE---RLATMKKEAILVNCSRGPVIDEV--ALVEH--LKQNPMFRVG 295 (342)
Q Consensus 245 plt~~t~~l-------i~----~~---~l~~mk~gailIN~sRG~~vd~~--aL~~a--L~~g~i~gaa 295 (342)
|. |...+. .| ++ .+....|++++++++- .+|.- .+.+. +...++.|.+
T Consensus 78 ~~-p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN--P~~~~~~~~~~~~~~~~~rviG~g 143 (310)
T 1guz_A 78 GL-PRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN--PLDIMTHVAWVRSGLPKERVIGMA 143 (310)
T ss_dssp SC-CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS--SHHHHHHHHHHHHCSCGGGEEEEC
T ss_pred CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC--chHHHHHHHHHhcCCChHHEEECC
Confidence 84 332222 11 11 2222357889999854 33332 22222 3344666664
No 187
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.41 E-value=0.00036 Score=62.21 Aligned_cols=97 Identities=21% Similarity=0.173 Sum_probs=62.6
Q ss_pred ccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 160 g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
.-++.|++|.|||.|.+|...++.| ...|++|.++++...+....+.+. +. ..+....--++.+..+|+
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~L-l~~GA~VtVvap~~~~~l~~l~~~--------~~--i~~i~~~~~~~dL~~adL 94 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGF-LQEGAAITVVAPTVSAEINEWEAK--------GQ--LRVKRKKVGEEDLLNVFF 94 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHH-GGGCCCEEEECSSCCHHHHHHHHT--------TS--CEEECSCCCGGGSSSCSE
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEECCCCCHHHHHHHHc--------CC--cEEEECCCCHhHhCCCCE
Confidence 4589999999999999999999998 588999999999876544333221 11 111111111345678999
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
|+.+....+ +|.......+ -.++||+..
T Consensus 95 VIaAT~d~~-----~N~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 95 IVVATNDQA-----VNKFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp EEECCCCTH-----HHHHHHHHSC-TTCEEEC--
T ss_pred EEECCCCHH-----HHHHHHHHHh-CCCEEEEeC
Confidence 988765333 3444444455 557788743
No 188
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.41 E-value=0.00052 Score=63.92 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=68.3
Q ss_pred CEEEEEccChHHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG~G~IG~~-vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
.+|||||+|.||+. +++.+.+.-++++. ++|+++... +.+.+.++ ...+.+++++..++|+|+++
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~-~~~~~~~g------------~~~~~~~~~l~~~~D~V~i~ 72 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKA-LPICESWR------------IPYADSLSSLAASCDAVFVH 72 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTH-HHHHHHHT------------CCBCSSHHHHHTTCSEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHH-HHHHHHcC------------CCccCcHHHhhcCCCEEEEe
Confidence 48999999999997 88876433478876 889887542 22222221 11246777776789999999
Q ss_pred CCCCcccccccCHhHHccCCCCc-EEEec-CCCccCCHHHHHHHHHcCCccE
Q 019328 244 PVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 244 lplt~~t~~li~~~~l~~mk~ga-ilIN~-sRG~~vd~~aL~~aL~~g~i~g 293 (342)
+|... .. +-....++.|. +++.- .--.+-+.+.|.++.++..+.-
T Consensus 73 tp~~~--h~---~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~ 119 (319)
T 1tlt_A 73 SSTAS--HF---DVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTL 119 (319)
T ss_dssp SCTTH--HH---HHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred CCchh--HH---HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 99432 21 22233455565 55542 2233445567888877765543
No 189
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.41 E-value=0.00034 Score=57.96 Aligned_cols=102 Identities=9% Similarity=0.092 Sum_probs=69.3
Q ss_pred CCEEEEEcc----ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 165 GQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 165 gktvGIiG~----G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
-++|+|||. |.+|..+++.| +..|.+|+..+|.... . .+...+.+++++....|++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l-~~~G~~v~~Vnp~~~~-----------------i--~G~~~y~sl~~l~~~vDlv 81 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYL-LEHGYDVYPVNPKYEE-----------------V--LGRKCYPSVLDIPDKIEVV 81 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHH-HHTTCEEEEECTTCSE-----------------E--TTEECBSSGGGCSSCCSEE
T ss_pred CCEEEEEccCCCCCchHHHHHHHH-HHCCCEEEEECCCCCe-----------------E--CCeeccCCHHHcCCCCCEE
Confidence 689999999 79999999997 6788888777765321 0 1223456889988899999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccE
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~g 293 (342)
++++|. +....++. +..+ ...+.++++.+ . .++.+.+++++..+.-
T Consensus 82 vi~vp~-~~~~~vv~-~~~~-~gi~~i~~~~g--~--~~~~l~~~a~~~Gi~v 127 (144)
T 2d59_A 82 DLFVKP-KLTMEYVE-QAIK-KGAKVVWFQYN--T--YNREASKKADEAGLII 127 (144)
T ss_dssp EECSCH-HHHHHHHH-HHHH-HTCSEEEECTT--C--CCHHHHHHHHHTTCEE
T ss_pred EEEeCH-HHHHHHHH-HHHH-cCCCEEEECCC--c--hHHHHHHHHHHcCCEE
Confidence 999994 44555543 3333 23345665543 2 2677788777765543
No 190
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.41 E-value=0.00023 Score=58.95 Aligned_cols=102 Identities=8% Similarity=0.008 Sum_probs=59.5
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc-c-ccccCCHHHH-hhcCCEEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-T-WKRASSMDEV-LREADVIS 241 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~l~el-l~~sDiV~ 241 (342)
.+++.|+|+|.+|+.+++.| ...|.+|.+.|+++....+.....+ ..+..-. + ......+.++ +.++|.|+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L-~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQL-NQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHH-HHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCcEEEECCCHHHHHHHHHH-HHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 56799999999999999998 6789999999997432111111100 0010000 0 0011234444 78999999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
++++... .++.-....+.+.+...+|...+.
T Consensus 77 ~~~~~d~--~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 77 ALSDNDA--DNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp ECSSCHH--HHHHHHHHHHHHTSSSCEEEECSS
T ss_pred EecCChH--HHHHHHHHHHHHCCCCEEEEEECC
Confidence 9998543 333334455556454455544333
No 191
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.39 E-value=0.00039 Score=64.20 Aligned_cols=108 Identities=14% Similarity=0.114 Sum_probs=69.4
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
++.|+++.|+|.|.+|+.++..| ...|+ +|.+++|+.++. ++..+. .......++++ + ++|+|
T Consensus 119 ~~~~k~vlvlGaGGaaraia~~L-~~~G~~~v~v~nRt~~ka-~~La~~------------~~~~~~~~l~~-l-~~Div 182 (282)
T 3fbt_A 119 EIKNNICVVLGSGGAARAVLQYL-KDNFAKDIYVVTRNPEKT-SEIYGE------------FKVISYDELSN-L-KGDVI 182 (282)
T ss_dssp CCTTSEEEEECSSTTHHHHHHHH-HHTTCSEEEEEESCHHHH-HHHCTT------------SEEEEHHHHTT-C-CCSEE
T ss_pred CccCCEEEEECCcHHHHHHHHHH-HHcCCCEEEEEeCCHHHH-HHHHHh------------cCcccHHHHHh-c-cCCEE
Confidence 57899999999999999999998 57898 899999987642 221111 01111223444 4 89999
Q ss_pred EEcCCCC--cccc-cccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 241 SLHPVLD--KTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 241 ~l~lplt--~~t~-~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
+.++|.. +... -.+..+.| +++.+++++.=.+ ..+.=|.+|-+.|
T Consensus 183 InaTp~Gm~~~~~~~pi~~~~l---~~~~~v~DlvY~P-~~T~ll~~A~~~G 230 (282)
T 3fbt_A 183 INCTPKGMYPKEGESPVDKEVV---AKFSSAVDLIYNP-VETLFLKYARESG 230 (282)
T ss_dssp EECSSTTSTTSTTCCSSCHHHH---TTCSEEEESCCSS-SSCHHHHHHHHTT
T ss_pred EECCccCccCCCccCCCCHHHc---CCCCEEEEEeeCC-CCCHHHHHHHHCc
Confidence 9999963 2211 12455444 6788888886443 2344444554544
No 192
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.39 E-value=0.00027 Score=66.18 Aligned_cols=117 Identities=12% Similarity=0.145 Sum_probs=67.6
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
.++|+|||.|.||..+|..|+ .-|. +|..||++.+.......+ ......... .........++ +.++.||+|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la-~~g~~~V~l~D~~~~~~~~~~~~-l~~~~~~~~-~~~~i~~t~d~-~a~~~aDiVi~a 79 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVG-KDNLADVVLFDIAEGIPQGKALD-ITHSMVMFG-STSKVIGTDDY-ADISGSDVVIIT 79 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSSSHHHHHHHH-HHHHHHHHT-CCCCEEEESCG-GGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCceEEEEeCCchHHHHHHHH-HHhhhhhcC-CCcEEEECCCH-HHhCCCCEEEEe
Confidence 468999999999999999975 4466 899999986532211000 000000000 01111222466 678999999999
Q ss_pred CCCCcccccc-----------cCHh---HHccCCCCcEEEecCCCccCCHHHHHHHH
Q 019328 244 PVLDKTTYHL-----------INKE---RLATMKKEAILVNCSRGPVIDEVALVEHL 286 (342)
Q Consensus 244 lplt~~t~~l-----------i~~~---~l~~mk~gailIN~sRG~~vd~~aL~~aL 286 (342)
++.. ...++ +-++ .++...|++++|+++...-+....+.+..
T Consensus 80 vg~p-~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 80 ASIP-GRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp CCCS-SCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCC-CCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHhh
Confidence 8421 11111 0011 22223579999999886655555666654
No 193
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.37 E-value=0.001 Score=62.54 Aligned_cols=68 Identities=24% Similarity=0.328 Sum_probs=50.1
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV~l 242 (342)
.+|||||+|.||+..++.+.+.-++++. ++|+++... +.+.+.+ +...+.+++++++ +.|+|++
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~------------g~~~~~~~~~~l~~~~~D~V~i 71 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGA-QRLAEAN------------GAEAVASPDEVFARDDIDGIVI 71 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHTT------------TCEEESSHHHHTTCSCCCEEEE
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHH-HHHHHHc------------CCceeCCHHHHhcCCCCCEEEE
Confidence 4899999999999999987433478877 689887542 2222221 1234579999998 8999999
Q ss_pred cCCC
Q 019328 243 HPVL 246 (342)
Q Consensus 243 ~lpl 246 (342)
++|.
T Consensus 72 ~tp~ 75 (344)
T 3euw_A 72 GSPT 75 (344)
T ss_dssp CSCG
T ss_pred eCCc
Confidence 9994
No 194
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.36 E-value=0.00043 Score=63.83 Aligned_cols=117 Identities=18% Similarity=0.224 Sum_probs=71.0
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
++.||++.|+|.|.||+++|+.| ...| +|++++|+.++. ++..+.+.... ....... ....++.+.+.++|+|+
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L-~~~G-~V~v~~r~~~~~-~~l~~~~~~~~--~~~~~~~-~d~~~~~~~~~~~DilV 198 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFEL-AKDN-NIIIANRTVEKA-EALAKEIAEKL--NKKFGEE-VKFSGLDVDLDGVDIII 198 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHH-TSSS-EEEEECSSHHHH-HHHHHHHHHHH--TCCHHHH-EEEECTTCCCTTCCEEE
T ss_pred CcCCCEEEEECchHHHHHHHHHH-HHCC-CEEEEECCHHHH-HHHHHHHhhhc--cccccee-EEEeeHHHhhCCCCEEE
Confidence 57899999999999999999998 5789 999999986532 22222211100 0000000 01112345678899999
Q ss_pred EcCCCCcccc---cccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHc
Q 019328 242 LHPVLDKTTY---HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (342)
Q Consensus 242 l~lplt~~t~---~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~ 288 (342)
.+.|...... ..+. ..+.++++.+++|++-.. ..+. |.+..++
T Consensus 199 n~ag~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p-~~t~-ll~~a~~ 244 (287)
T 1nvt_A 199 NATPIGMYPNIDVEPIV--KAEKLREDMVVMDLIYNP-LETV-LLKEAKK 244 (287)
T ss_dssp ECSCTTCTTCCSSCCSS--CSTTCCSSSEEEECCCSS-SSCH-HHHHHHT
T ss_pred ECCCCCCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC-ccCH-HHHHHHH
Confidence 9998654211 1120 135678999999998753 3333 4444443
No 195
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.33 E-value=0.00034 Score=67.27 Aligned_cols=166 Identities=16% Similarity=0.219 Sum_probs=104.3
Q ss_pred CceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccChHHHHHHHHHHhcC
Q 019328 109 GIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGF 188 (342)
Q Consensus 109 gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~IG~~vA~~l~~a~ 188 (342)
.|++.|+ + -.-+|=-+++-+++..| ..|+.+...+|-|+|.|.-|..+|+.+ .++
T Consensus 156 ~ipvf~D-D--iqGTa~V~lAall~al~---------------------l~g~~l~d~kVVi~GAGaAG~~iA~ll-~~~ 210 (398)
T 2a9f_A 156 HIPVFHD-D--QHGTAIVVLAAIFNSLK---------------------LLKKSLDEVSIVVNGGGSAGLSITRKL-LAA 210 (398)
T ss_dssp SSCEEEH-H--HHHHHHHHHHHHHHHHH---------------------TTTCCTTSCEEEEECCSHHHHHHHHHH-HHH
T ss_pred Ccceecc-h--hhhHHHHHHHHHHHHHH---------------------HhCCCCCccEEEEECCCHHHHHHHHHH-HHc
Confidence 5888883 2 22334445555555554 124578899999999999999999997 688
Q ss_pred Cc-EEEEEcCCh-----h-hHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHcc
Q 019328 189 KM-NLIYYDLYQ-----A-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (342)
Q Consensus 189 g~-~V~~~d~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~ 261 (342)
|. +|+.+|++. + .....+...|.. ... . .....+|+|+++.+|+++=. ++-+++.++.++.
T Consensus 211 Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~---~~~--~--~~~~~~L~eav~~ADV~IG~-----Sapgl~T~EmVk~ 278 (398)
T 2a9f_A 211 GATKVTVVDKFGIINEQEAAQLAPHHLDIAK---VTN--R--EFKSGTLEDALEGADIFIGV-----SAPGVLKAEWISK 278 (398)
T ss_dssp TCCEEEEEETTEECCTTCCCSCCC---CHHH---HHS--C--TTCCCSCSHHHHTTCSEEEC-----CSTTCCCHHHHHT
T ss_pred CCCeEEEEECCCcccCCccccchHHHHHHhh---ccC--c--ccchhhHHHHhccCCEEEec-----CCCCCCCHHHHHh
Confidence 99 999999873 1 111111111111 000 0 01135799999999998766 2369999999999
Q ss_pred CCCCcEEEecCCCccCCHHHHHHHHHcCC-ccEEEeecCCCCCCCCCCccCCCceEEcCCCC
Q 019328 262 MKKEAILVNCSRGPVIDEVALVEHLKQNP-MFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIA 322 (342)
Q Consensus 262 mk~gailIN~sRG~~vd~~aL~~aL~~g~-i~gaalDV~~~EP~~~~~L~~~~nvi~TPHia 322 (342)
|+++++++.+|+-.. |-.-.+|.+.|+ |.+-| -...| -+..|+++-|=++
T Consensus 279 Ma~~pIIfalsNPt~--E~~pe~a~~~g~~i~atG---rs~~p------~Q~NN~~~FPgi~ 329 (398)
T 2a9f_A 279 MAARPVIFAMANPIP--EIYPDEALEAGAYIVGTG---RSDFP------NQINNVLAFPGIF 329 (398)
T ss_dssp SCSSCEEEECCSSSC--SSCHHHHHTTTCSEEEES---CTTSS------SBCCGGGTHHHHH
T ss_pred hCCCCEEEECCCCCc--cCCHHHHHHhCCeEEEeC---CCCCC------CcCCceeEcchHH
Confidence 999999999998653 222223333355 44443 11111 3456777777554
No 196
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.31 E-value=0.00081 Score=63.06 Aligned_cols=70 Identities=11% Similarity=0.114 Sum_probs=50.3
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV~l 242 (342)
.+|||||+|.||+..++.+.+.-++++. ++|+++... +.+.+.++ . ...+.+++++++ +.|+|++
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~~~-------~----~~~~~~~~~ll~~~~~D~V~i 73 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENA-QKMAKELA-------I----PVAYGSYEELCKDETIDIIYI 73 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHH-HHHHHHTT-------C----CCCBSSHHHHHHCTTCSEEEE
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHH-HHHHHHcC-------C----CceeCCHHHHhcCCCCCEEEE
Confidence 5899999999999999987433477876 678886542 22222221 1 023579999998 8999999
Q ss_pred cCCCC
Q 019328 243 HPVLD 247 (342)
Q Consensus 243 ~lplt 247 (342)
++|..
T Consensus 74 ~tp~~ 78 (330)
T 3e9m_A 74 PTYNQ 78 (330)
T ss_dssp CCCGG
T ss_pred cCCCH
Confidence 99943
No 197
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.31 E-value=0.0003 Score=65.52 Aligned_cols=106 Identities=18% Similarity=0.164 Sum_probs=64.7
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV~l 242 (342)
.+|||||+|.||+.+++.+.+.-+.++. ++|+++... +. + .. . ...+.+++++++ ++|+|++
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~-~~----~----~~---~---~~~~~~~~~~l~~~~~D~V~i 75 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNL-AL----V----PP---G---CVIESDWRSVVSAPEVEAVII 75 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHH-TT----C----CT---T---CEEESSTHHHHTCTTCCEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHH-HH----H----Hh---h---CcccCCHHHHhhCCCCCEEEE
Confidence 4799999999999999987433367754 889886542 11 0 00 0 123568999996 7999999
Q ss_pred cCCCCcccccccCHhHHccCCCCc-EEEec-CCCccCCHHHHHHHHHcCCc
Q 019328 243 HPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPM 291 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~ga-ilIN~-sRG~~vd~~aL~~aL~~g~i 291 (342)
++|. .... +-..+.++.|. +++.- .--.+-+.+.|.++.++..+
T Consensus 76 ~tp~--~~h~---~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~ 121 (315)
T 3c1a_A 76 ATPP--ATHA---EITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGV 121 (315)
T ss_dssp ESCG--GGHH---HHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCC
T ss_pred eCCh--HHHH---HHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCC
Confidence 9993 2221 12223355564 55552 22233344667777665443
No 198
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.29 E-value=0.00061 Score=66.65 Aligned_cols=118 Identities=19% Similarity=0.200 Sum_probs=79.8
Q ss_pred ccccCCCEEEEEccChHHHHHHHHHHhcCCc---EEEEEc----CC--hhh--H---HHHHHhhhhhhhccCCCCCcccc
Q 019328 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKM---NLIYYD----LY--QAT--R---LEKFVTAYGQFLKANGEQPVTWK 225 (342)
Q Consensus 160 g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~---~V~~~d----~~--~~~--~---~~~~~~~~~~~~~~~~~~~~~~~ 225 (342)
|..+.++++.|+|.|..|+.+++.| ...|+ +|+.+| |+ ..+ . ...+...+. .. ... ..
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L-~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a---~~---~~~-~~ 252 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRIL-TEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLL---KK---TNG-EN 252 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHH-HHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHH---TT---SCT-TC
T ss_pred CCCccCCEEEEECccHHHHHHHHHH-HHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHh---hc---ccc-cc
Confidence 3568899999999999999999998 57898 799999 76 211 1 111000110 00 000 00
Q ss_pred ccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCC
Q 019328 226 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 226 ~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~ 290 (342)
...++.+.++++|+++.+.|..+ +++.++.++.|++++++++++.- ..|.-+.+|.+.|.
T Consensus 253 ~~~~L~e~l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP--~~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 253 IEGGPQEALKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANP--VPEILPEEAKKAGA 312 (439)
T ss_dssp CCSSHHHHHTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSS--SCSSCHHHHHHHTC
T ss_pred ccccHHHHhccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCC--CCcchHHHHHHcCC
Confidence 13578999999999999988532 55667788899999999999543 34555556666554
No 199
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.28 E-value=0.0014 Score=61.14 Aligned_cols=68 Identities=18% Similarity=0.311 Sum_probs=48.0
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh-hcCCEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLH 243 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~sDiV~l~ 243 (342)
.+|||||+|.||+.+++.+.+.-++++. ++|+++... +.+.+.++ . ...+.++++++ .+.|+|+++
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~-~~~~~~~~-------~----~~~~~~~~~~l~~~~D~V~i~ 69 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETA-ATFASRYQ-------N----IQLFDQLEVFFKSSFDLVYIA 69 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHH-HHHGGGSS-------S----CEEESCHHHHHTSSCSEEEEC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHH-HHHHHHcC-------C----CeEeCCHHHHhCCCCCEEEEe
Confidence 3799999999999999987433367765 788886542 22221111 0 12357899999 789999999
Q ss_pred CC
Q 019328 244 PV 245 (342)
Q Consensus 244 lp 245 (342)
+|
T Consensus 70 tp 71 (325)
T 2ho3_A 70 SP 71 (325)
T ss_dssp SC
T ss_pred CC
Confidence 99
No 200
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.27 E-value=0.00059 Score=65.83 Aligned_cols=107 Identities=15% Similarity=0.211 Sum_probs=65.6
Q ss_pred EEEEEccChHHHHHHHHHHhc-------CCcEEEEEcCChhhHHHHHHhhhhhhh-----ccCCCCCccccccCCHHHHh
Q 019328 167 TVGVIGAGRIGSAYARMMVEG-------FKMNLIYYDLYQATRLEKFVTAYGQFL-----KANGEQPVTWKRASSMDEVL 234 (342)
Q Consensus 167 tvGIiG~G~IG~~vA~~l~~a-------~g~~V~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~ell 234 (342)
+|+|||.|..|.++|..|++. |+.+|..|.|.++...+...+.....- ...-..+.......++++.+
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 899999999999999987532 234688887664321010000000000 00011122223456899999
Q ss_pred hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 235 ~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
+.||+|++++|. ...+.+ -++....++++..+|+++-|=
T Consensus 116 ~~ad~ii~avPs-~~~r~~-l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 116 KDVDIIVFNIPH-QFLPRI-CSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp TTCSEEEECSCG-GGHHHH-HHHHTTTSCTTCEEEECCCSC
T ss_pred hcCCEEEEECCh-hhhHHH-HHHhccccCCCceeEEecccc
Confidence 999999999992 333332 334455678999999999884
No 201
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.26 E-value=0.00069 Score=64.07 Aligned_cols=69 Identities=22% Similarity=0.299 Sum_probs=50.3
Q ss_pred CCEEEEEccChHHHHHHHHHHhc-CCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEG-FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a-~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV 240 (342)
-.+|||||+|.||+..++.+.+. -++++. ++|+++... +.+.+.++ ...+.+++++++ +.|+|
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~~~~~~------------~~~~~~~~~ll~~~~~D~V 79 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAAL-KAAVERTG------------ARGHASLTDMLAQTDADIV 79 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHH-HHHHHHHC------------CEEESCHHHHHHHCCCSEE
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHH-HHHHHHcC------------CceeCCHHHHhcCCCCCEE
Confidence 35899999999999999987433 378866 789987542 22222221 234579999997 79999
Q ss_pred EEcCCC
Q 019328 241 SLHPVL 246 (342)
Q Consensus 241 ~l~lpl 246 (342)
++|+|.
T Consensus 80 ~i~tp~ 85 (354)
T 3q2i_A 80 ILTTPS 85 (354)
T ss_dssp EECSCG
T ss_pred EECCCc
Confidence 999993
No 202
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.25 E-value=0.00097 Score=62.60 Aligned_cols=110 Identities=15% Similarity=0.138 Sum_probs=65.3
Q ss_pred CEEEEEccChHHHHHHHHHH-hcCCcEE-EEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMV-EGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~-~a~g~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV~ 241 (342)
.+|||||+|.||+..++.+. +.-++++ .++|+++... +.+.+.++ . ...+.+++++++ ++|+|+
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~-~~~a~~~g----------~-~~~~~~~~~~l~~~~~D~V~ 76 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQL-EWAKNELG----------V-ETTYTNYKDMIDTENIDAIF 76 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHH-HHHHHTTC----------C-SEEESCHHHHHTTSCCSEEE
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHH-HHHHHHhC----------C-CcccCCHHHHhcCCCCCEEE
Confidence 58999999999999999874 3357885 4689887542 22222111 1 023468999997 699999
Q ss_pred EcCCCCcccccccCHhHHccCCCCc-EEEec-CCCccCCHHHHHHHHHcC-Ccc
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQN-PMF 292 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~ga-ilIN~-sRG~~vd~~aL~~aL~~g-~i~ 292 (342)
+++|.. ... +-..+.++.|. +++.- .--..-+.+.|.++.++. .+.
T Consensus 77 i~tp~~--~h~---~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 77 IVAPTP--FHP---EMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp ECSCGG--GHH---HHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred EeCChH--hHH---HHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 999932 221 22333445565 44431 111222334577777665 443
No 203
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.25 E-value=0.0011 Score=62.64 Aligned_cols=105 Identities=12% Similarity=0.203 Sum_probs=62.9
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
.+|+|||.|.+|..+|..|+ .-|. +|..||++.+.... ............. .........++++.++.||+|++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la-~~g~~~V~L~D~~~~~~~~-~~~~l~~~~~~~~-~~~~i~~t~d~~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCA-LRELADVVLYDVVKGMPEG-KALDLSHVTSVVD-TNVSVRAEYSYEAALTGADCVIVTA 86 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSSSHHHH-HHHHHHHHHHHTT-CCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEECChhHHHH-HHHHHHhhhhccC-CCCEEEEeCCHHHHhCCCCEEEEcc
Confidence 58999999999999999985 4455 89999998653221 1111100000001 1111222368888899999999998
Q ss_pred --CCCccc------cccc-------CH---hHHccCCCCcEEEecCC
Q 019328 245 --VLDKTT------YHLI-------NK---ERLATMKKEAILVNCSR 273 (342)
Q Consensus 245 --plt~~t------~~li-------~~---~~l~~mk~gailIN~sR 273 (342)
|..+.- +-.+ -. +.+....|++++|+++-
T Consensus 87 g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 133 (331)
T 1pzg_A 87 GLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTN 133 (331)
T ss_dssp SCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 654422 2111 01 12333358999998865
No 204
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.25 E-value=0.00093 Score=62.34 Aligned_cols=110 Identities=14% Similarity=0.162 Sum_probs=63.1
Q ss_pred CEEEEEccChHHHH-HHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh-hcCCEEEEc
Q 019328 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLH 243 (342)
Q Consensus 166 ktvGIiG~G~IG~~-vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~sDiV~l~ 243 (342)
.+|||||+|.||+. +++.+.+.-+.++.++|+++... +.+.+.++ .. ..+.+..+++ .++|+|+++
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~-~~~a~~~g-------~~----~~~~~~~~~l~~~~D~V~i~ 70 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVL-GTLATRYR-------VS----ATCTDYRDVLQYGVDAVMIH 70 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHH-HHHHHHTT-------CC----CCCSSTTGGGGGCCSEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHH-HHHHHHcC-------CC----ccccCHHHHhhcCCCEEEEE
Confidence 47999999999984 88886332378888999987643 22222221 10 0022334455 789999999
Q ss_pred CCCCcccccccCHhHHccCCCCc-EEEec-CCCccCCHHHHHHHHHcCCcc
Q 019328 244 PVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 244 lplt~~t~~li~~~~l~~mk~ga-ilIN~-sRG~~vd~~aL~~aL~~g~i~ 292 (342)
+| +.... +-..+.++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 71 tp--~~~h~---~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 71 AA--TDVHS---TLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp SC--GGGHH---HHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred CC--chhHH---HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 99 33221 11223344453 55542 112233445677777665544
No 205
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.24 E-value=0.0013 Score=61.21 Aligned_cols=77 Identities=17% Similarity=0.201 Sum_probs=48.2
Q ss_pred CEEEEEccChHHHHHHHHHHhcCC--cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
++|+|||.|.||..+|..|+ ..| .+|..||++.... +.....++....... ...... ..++ +.++.||+|+++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~-~~g~~~~V~l~d~~~~~~-~~~~~~l~~~~~~~~-~~~~~~-~~d~-~~~~~aDvViia 76 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLI-AQGVADDYVFIDANEAKV-KADQIDFQDAMANLE-AHGNIV-INDW-AALADADVVIST 76 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSSHHHH-HHHHHHHHHHGGGSS-SCCEEE-ESCG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEcCCHHHH-HHHHHHHHhhhhhcC-CCeEEE-eCCH-HHhCCCCEEEEe
Confidence 48999999999999999875 345 6899999986532 221111110000000 011111 2466 678999999999
Q ss_pred CCCC
Q 019328 244 PVLD 247 (342)
Q Consensus 244 lplt 247 (342)
+|..
T Consensus 77 v~~~ 80 (309)
T 1hyh_A 77 LGNI 80 (309)
T ss_dssp CSCG
T ss_pred cCCc
Confidence 9853
No 206
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.23 E-value=0.0028 Score=65.98 Aligned_cols=155 Identities=17% Similarity=0.143 Sum_probs=96.4
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHH--Hh-hhhhh-----hccCCCCCccccccCCHHHHhhc
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF--VT-AYGQF-----LKANGEQPVTWKRASSMDEVLRE 236 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~--~~-~~~~~-----~~~~~~~~~~~~~~~~l~ell~~ 236 (342)
=++|||||.|.||..+|..++ ..|++|+.+|++++...... .. .+... ...............++++ ++.
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a-~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~ 393 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFA-RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE-LST 393 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGG-GGS
T ss_pred ccEEEEEcccHHHHHHHHHHH-hCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHH-Hhh
Confidence 379999999999999999975 77999999999875421111 00 00000 0000000011122334444 689
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEeecCCCCCCCCCCccCCCceE
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAI 316 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi 316 (342)
||+|+=++|-+-+.++-+-++.=+.++|+++|-.-+.+ +.-..|.++++ .+-.-.++=.|.+-| .-||.+ ||
T Consensus 394 aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~-~p~r~ig~HFfnP~~--~m~LVE---vi 465 (742)
T 3zwc_A 394 VDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTD-RPQLVIGTHFFSPAH--VMRLLE---VI 465 (742)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSS-CGGGEEEEECCSSTT--TCCEEE---EE
T ss_pred CCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcC-CccccccccccCCCC--CCceEE---Ee
Confidence 99999999998888887777777889999998654433 44566766654 334555665554322 223444 78
Q ss_pred EcCCCCCCcHHHH
Q 019328 317 VVPHIASASKWTR 329 (342)
Q Consensus 317 ~TPHia~~t~~~~ 329 (342)
-+|+.+-.|.+..
T Consensus 466 ~g~~Ts~e~~~~~ 478 (742)
T 3zwc_A 466 PSRYSSPTTIATV 478 (742)
T ss_dssp ECSSCCHHHHHHH
T ss_pred cCCCCCHHHHHHH
Confidence 8888765444443
No 207
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.22 E-value=0.00096 Score=62.28 Aligned_cols=66 Identities=17% Similarity=0.286 Sum_probs=47.3
Q ss_pred EEEEEccChHHHHH-HHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEEEE
Q 019328 167 TVGVIGAGRIGSAY-ARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 167 tvGIiG~G~IG~~v-A~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV~l 242 (342)
+|||||+|.||+.+ ++.+.+ -+.++. ++|+++... +.+.+.++ .. ..+.+++++++ ++|+|++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~-~~~~~~~g-------~~----~~~~~~~~~l~~~~~D~V~i 68 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERG-AAYATENG-------IG----KSVTSVEELVGDPDVDAVYV 68 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHH-HHHHHHTT-------CS----CCBSCHHHHHTCTTCCEEEE
T ss_pred eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHH-HHHHHHcC-------CC----cccCCHHHHhcCCCCCEEEE
Confidence 79999999999998 777654 778866 689887542 22222221 10 13468999997 4999999
Q ss_pred cCC
Q 019328 243 HPV 245 (342)
Q Consensus 243 ~lp 245 (342)
++|
T Consensus 69 ~tp 71 (332)
T 2glx_A 69 STT 71 (332)
T ss_dssp CSC
T ss_pred eCC
Confidence 999
No 208
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.21 E-value=0.0013 Score=61.55 Aligned_cols=122 Identities=14% Similarity=0.154 Sum_probs=67.6
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
++|+|||.|.||..+|..|+ ..|. +|..||+++... +.....+....... ...... ..+. +.++.||+|+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~-~~g~~~~V~l~D~~~~~~-~~~~~~l~~~~~~~--~~~~i~-~~d~-~~~~~aDvViia 74 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALL-MKGFAREMVLIDVDKKRA-EGDALDLIHGTPFT--RRANIY-AGDY-ADLKGSDVVIVA 74 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSSHHHH-HHHHHHHHHHGGGS--CCCEEE-ECCG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEeCChHHH-HHHHHHHHhhhhhc--CCcEEE-eCCH-HHhCCCCEEEEc
Confidence 47999999999999999874 4566 999999986532 11111111000000 011111 1343 567899999999
Q ss_pred CCCCcccccc-----------cCHhHHcc---CCCCcEEEecCCCccCCHHHHHHHH--HcCCccEE
Q 019328 244 PVLDKTTYHL-----------INKERLAT---MKKEAILVNCSRGPVIDEVALVEHL--KQNPMFRV 294 (342)
Q Consensus 244 lplt~~t~~l-----------i~~~~l~~---mk~gailIN~sRG~~vd~~aL~~aL--~~g~i~ga 294 (342)
+|.... .++ +-.+.++. ..|++++|+++-+.-+.+..+.+.. ...++.|.
T Consensus 75 v~~~~~-~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~ 140 (319)
T 1a5z_A 75 AGVPQK-PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGS 140 (319)
T ss_dssp CCCCCC-SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred cCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHHHHHHHHHHhCCChhhEEee
Confidence 995331 111 01222222 2578899988665433333333332 34456555
No 209
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.19 E-value=0.0012 Score=61.72 Aligned_cols=118 Identities=14% Similarity=0.187 Sum_probs=72.5
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCC---hhhHHHHHHhhhhhhhccCCCCCccccccCCH---HHHh
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY---QATRLEKFVTAYGQFLKANGEQPVTWKRASSM---DEVL 234 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~ell 234 (342)
++.||++.|+|.|.+|+.++..| ...|+ +|.+++|+ ..+ .++..+.+... .+ .........++ .+.+
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L-~~~G~~~v~v~nRt~~~~~~-a~~la~~~~~~---~~-~~v~~~~~~~l~~~~~~l 218 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQA-AIEGIKEIKLFNRKDDFFEK-AVAFAKRVNEN---TD-CVVTVTDLADQHAFTEAL 218 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEECSSTHHHH-HHHHHHHHHHH---SS-CEEEEEETTCHHHHHHHH
T ss_pred CcCCCEEEEECcCHHHHHHHHHH-HHcCCCEEEEEECCCchHHH-HHHHHHHhhhc---cC-cceEEechHhhhhhHhhc
Confidence 68899999999999999999998 57898 89999998 432 22222222110 00 00111122344 5678
Q ss_pred hcCCEEEEcCCCCc--cccccc--CHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 235 READVISLHPVLDK--TTYHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 235 ~~sDiV~l~lplt~--~t~~li--~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
.++|+|+.+.|..- .....+ +. ..++++.++.++.=.+ ..+.=|.+|-+.|
T Consensus 219 ~~~DiIINaTp~Gm~~~~~~~~~~~~---~~l~~~~~v~D~vY~P-~~T~ll~~A~~~G 273 (312)
T 3t4e_A 219 ASADILTNGTKVGMKPLENESLIGDV---SLLRPELLVTECVYNP-HMTKLLQQAQQAG 273 (312)
T ss_dssp HHCSEEEECSSTTSTTSTTCCSCCCG---GGSCTTCEEEECCCSS-SSCHHHHHHHHTT
T ss_pred cCceEEEECCcCCCCCCCCCcccCCH---HHcCCCCEEEEeccCC-CCCHHHHHHHHCC
Confidence 89999999999652 111111 22 3457788888876443 3444445555544
No 210
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.17 E-value=0.00095 Score=63.40 Aligned_cols=66 Identities=17% Similarity=0.238 Sum_probs=48.9
Q ss_pred CEEEEEccChHHHHHHHHHHhcC-CcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV~ 241 (342)
.+|||||+|.||+..++.+ +.. ++++. ++|+++.... ....+ +...+.+++++++ +.|+|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l-~~~~~~~l~av~d~~~~~~~--~a~~~------------g~~~~~~~~~ll~~~~~D~V~ 70 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLA-SAADNLEVHGVFDILAEKRE--AAAQK------------GLKIYESYEAVLADEKVDAVL 70 (359)
T ss_dssp EEEEEECCSHHHHHHHHHH-HTSTTEEEEEEECSSHHHHH--HHHTT------------TCCBCSCHHHHHHCTTCCEEE
T ss_pred CcEEEECcCHHHHHHHHHH-HhCCCcEEEEEEcCCHHHHH--HHHhc------------CCceeCCHHHHhcCCCCCEEE
Confidence 5899999999999999987 454 78876 5698875431 11111 1234579999998 789999
Q ss_pred EcCCC
Q 019328 242 LHPVL 246 (342)
Q Consensus 242 l~lpl 246 (342)
+|+|.
T Consensus 71 i~tp~ 75 (359)
T 3e18_A 71 IATPN 75 (359)
T ss_dssp ECSCG
T ss_pred EcCCc
Confidence 99994
No 211
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=97.16 E-value=0.00087 Score=64.20 Aligned_cols=39 Identities=26% Similarity=0.490 Sum_probs=35.3
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChh
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~ 200 (342)
.-+.||||+|+|.|.+|+.+++.+ +.+|++|+++|+++.
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa-~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAA-KEMGYKIAVLDPTKN 48 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSTT
T ss_pred cCCCCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEeCCCC
Confidence 457999999999999999999996 799999999998764
No 212
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.13 E-value=0.0013 Score=62.20 Aligned_cols=68 Identities=25% Similarity=0.394 Sum_probs=50.1
Q ss_pred CEEEEEccChHHHHHHHHHHhcC-CcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh--hcCCEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--READVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell--~~sDiV~ 241 (342)
.+|||||+|.||+..++.+ +.. ++++. ++|+++... +.+.+.++ ...+.++++++ .+.|+|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l-~~~~~~~lvav~d~~~~~~-~~~~~~~g------------~~~~~~~~~~l~~~~~D~V~ 71 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAY-TKSEKLKLVTCYSRTEDKR-EKFGKRYN------------CAGDATMEALLAREDVEMVI 71 (354)
T ss_dssp EEEEEECCSHHHHHHHHHH-TTCSSEEEEEEECSSHHHH-HHHHHHHT------------CCCCSSHHHHHHCSSCCEEE
T ss_pred ceEEEEccCHHHHHHHHHH-HhCCCcEEEEEECCCHHHH-HHHHHHcC------------CCCcCCHHHHhcCCCCCEEE
Confidence 4899999999999999987 555 78865 779887542 22222221 12357999999 5699999
Q ss_pred EcCCCC
Q 019328 242 LHPVLD 247 (342)
Q Consensus 242 l~lplt 247 (342)
+++|..
T Consensus 72 i~tp~~ 77 (354)
T 3db2_A 72 ITVPND 77 (354)
T ss_dssp ECSCTT
T ss_pred EeCChH
Confidence 999954
No 213
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.11 E-value=0.00086 Score=62.41 Aligned_cols=123 Identities=15% Similarity=0.133 Sum_probs=68.5
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
++|+|||.|.+|..+|..|+ ..|. +|..||++.... +.......... ......... ..+. +.++.||+|+++
T Consensus 1 mkI~VIGaG~vG~~la~~la-~~g~~~eV~L~D~~~~~~-~~~~~~l~~~~--~~~~~~~i~-~~~~-~a~~~aDvVIi~ 74 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALV-LRGSCSELVLVDRDEDRA-QAEAEDIAHAA--PVSHGTRVW-HGGH-SELADAQVVILT 74 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSSHHHH-HHHHHHHTTSC--CTTSCCEEE-EECG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCCHHHH-HHHHHhhhhhh--hhcCCeEEE-ECCH-HHhCCCCEEEEc
Confidence 47999999999999999874 5577 999999986532 21111111000 000011111 1243 568899999999
Q ss_pred CCCCcc---cc--------cccC--HhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEE
Q 019328 244 PVLDKT---TY--------HLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 244 lplt~~---t~--------~li~--~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ga 294 (342)
++.... ++ .++. .+.+....|++++|+++-+.=+....+.+.....++.|.
T Consensus 75 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 75 AGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 953221 11 1110 122333468999999876554444455555555566555
No 214
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.09 E-value=0.0015 Score=61.89 Aligned_cols=72 Identities=15% Similarity=0.307 Sum_probs=51.0
Q ss_pred CCCEEEEEccChHHHHHHHHHH-hcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~-~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDi 239 (342)
.-.+|||||+|.||+..++.++ +.-++++. ++|+++... +.+.+.++ .....+.+++++++ +.|+
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~a~~~g----------~~~~~~~~~~~ll~~~~~D~ 90 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRA-QAALDKYA----------IEAKDYNDYHDLINDKDVEV 90 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHH-HHHHHHHT----------CCCEEESSHHHHHHCTTCCE
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHH-HHHHHHhC----------CCCeeeCCHHHHhcCCCCCE
Confidence 3468999999999999999874 23478876 689887542 22322221 01234579999997 4899
Q ss_pred EEEcCCC
Q 019328 240 ISLHPVL 246 (342)
Q Consensus 240 V~l~lpl 246 (342)
|++|+|.
T Consensus 91 V~i~tp~ 97 (357)
T 3ec7_A 91 VIITASN 97 (357)
T ss_dssp EEECSCG
T ss_pred EEEcCCc
Confidence 9999994
No 215
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.08 E-value=0.001 Score=62.33 Aligned_cols=68 Identities=12% Similarity=0.190 Sum_probs=47.6
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccc-cccCCHHHHhh--cCCEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTW-KRASSMDEVLR--EADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ell~--~sDiV~ 241 (342)
.++||||+|.||+..++.+.+.-++++. ++|+++... ..+.+. .+. ..+.+++++++ +.|+|+
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~-~~~a~~------------~~~~~~~~~~~~ll~~~~~D~V~ 72 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESA-QAFANK------------YHLPKAYDKLEDMLADESIDVIY 72 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTT-CC---C------------CCCSCEESCHHHHHTCTTCCEEE
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHH-HHHHHH------------cCCCcccCCHHHHhcCCCCCEEE
Confidence 5899999999999999987444467765 678876542 111111 111 13579999998 799999
Q ss_pred EcCCC
Q 019328 242 LHPVL 246 (342)
Q Consensus 242 l~lpl 246 (342)
+++|.
T Consensus 73 i~tp~ 77 (329)
T 3evn_A 73 VATIN 77 (329)
T ss_dssp ECSCG
T ss_pred ECCCc
Confidence 99994
No 216
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.08 E-value=0.00012 Score=67.67 Aligned_cols=99 Identities=13% Similarity=0.040 Sum_probs=62.0
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh-hcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~sDiV~l~l 244 (342)
++|+|||.|.||..+|..|+ ..|.+|..|+|+.+.... ....+..+... ..+..+.+ ..+|+|++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~-~~g~~V~~~~r~~~~~~~---------~~~~g~~~~~~--~~~~~~~~~~~~D~vilav 70 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQ-QSLPHTTLIGRHAKTITY---------YTVPHAPAQDI--VVKGYEDVTNTFDVIIIAV 70 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HHCTTCEEEESSCEEEEE---------ESSTTSCCEEE--EEEEGGGCCSCEEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHH-HCCCeEEEEEeccCcEEE---------EecCCeeccce--ecCchHhcCCCCCEEEEeC
Confidence 57999999999999999984 557889999987532100 00111111111 11333443 7899999999
Q ss_pred CCCcccccccCHhHHccCCCCcEEEecCCCccCC
Q 019328 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk~gailIN~sRG~~vd 278 (342)
|.. +++..+ ++.-..+++++++|.+.-|=-..
T Consensus 71 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi~~~ 102 (294)
T 3g17_A 71 KTH-QLDAVI-PHLTYLAHEDTLIILAQNGYGQL 102 (294)
T ss_dssp CGG-GHHHHG-GGHHHHEEEEEEEEECCSSCCCG
T ss_pred Ccc-CHHHHH-HHHHHhhCCCCEEEEeccCcccH
Confidence 943 344433 23334457788999988875443
No 217
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.08 E-value=0.0018 Score=61.29 Aligned_cols=70 Identities=14% Similarity=0.151 Sum_probs=49.4
Q ss_pred CCCEEEEEccChHHH-HHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCE
Q 019328 164 KGQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (342)
Q Consensus 164 ~gktvGIiG~G~IG~-~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDi 239 (342)
.-.+|||||+|.||+ .+++.+.+.-++++. ++|+++... +.+.+.++ ...+.+++++++ +.|+
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~g------------~~~~~~~~~ll~~~~~D~ 92 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRA-KRFTERFG------------GEPVEGYPALLERDDVDA 92 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHH-HHHHHHHC------------SEEEESHHHHHTCTTCSE
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHH-HHHHHHcC------------CCCcCCHHHHhcCCCCCE
Confidence 346899999999998 788887433378876 678886542 23322221 123478999997 5899
Q ss_pred EEEcCCC
Q 019328 240 ISLHPVL 246 (342)
Q Consensus 240 V~l~lpl 246 (342)
|++|+|.
T Consensus 93 V~i~tp~ 99 (350)
T 3rc1_A 93 VYVPLPA 99 (350)
T ss_dssp EEECCCG
T ss_pred EEECCCc
Confidence 9999993
No 218
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.06 E-value=0.0014 Score=61.71 Aligned_cols=69 Identities=22% Similarity=0.232 Sum_probs=49.8
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV~l 242 (342)
.+|||||+|.||+..++.+.+.-++++. ++|+++... +.+.+.++ . ...+.+++++++ .+|+|++
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~~~-------~----~~~~~~~~~ll~~~~~D~V~i 70 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRL-REMKEKLG-------V----EKAYKDPHELIEDPNVDAVLV 70 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHH-HHHHHHHT-------C----SEEESSHHHHHHCTTCCEEEE
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHH-HHHHHHhC-------C----CceeCCHHHHhcCCCCCEEEE
Confidence 4799999999999999987433478876 689887542 22222221 0 123579999998 8999999
Q ss_pred cCCC
Q 019328 243 HPVL 246 (342)
Q Consensus 243 ~lpl 246 (342)
|+|.
T Consensus 71 ~tp~ 74 (344)
T 3ezy_A 71 CSST 74 (344)
T ss_dssp CSCG
T ss_pred cCCC
Confidence 9994
No 219
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.06 E-value=0.00069 Score=63.02 Aligned_cols=116 Identities=15% Similarity=0.204 Sum_probs=65.3
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCH-HHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM-DEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ell~~sDiV~l~l 244 (342)
++|+|||.|.||..+|..| . -|.+|..++|+.... +...+ .+......+.. .....+. ++....+|+|++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L-~-~g~~V~~~~r~~~~~-~~l~~-~G~~~~~~~~~---~~~~~~~~~~~~~~~D~vilav 75 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYL-S-LYHDVTVVTRRQEQA-AAIQS-EGIRLYKGGEE---FRADCSADTSINSDFDLLVVTV 75 (307)
T ss_dssp CEEEEECCSHHHHHHHHHH-H-TTSEEEEECSCHHHH-HHHHH-HCEEEEETTEE---EEECCEEESSCCSCCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHH-h-cCCceEEEECCHHHH-HHHHh-CCceEecCCCe---ecccccccccccCCCCEEEEEe
Confidence 5899999999999999998 5 689999999986431 11111 11111110100 0000011 23567899999999
Q ss_pred CCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccE
Q 019328 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~g 293 (342)
|.. ++...+ +.++.+.+++ +|.+.-|=-. ++.|.+.+...++.+
T Consensus 76 K~~-~~~~~l--~~l~~~~~~~-ivs~~nGi~~-~e~l~~~~~~~~vl~ 119 (307)
T 3ego_A 76 KQH-QLQSVF--SSLERIGKTN-ILFLQNGMGH-IHDLKDWHVGHSIYV 119 (307)
T ss_dssp CGG-GHHHHH--HHTTSSCCCE-EEECCSSSHH-HHHHHTCCCSCEEEE
T ss_pred CHH-HHHHHH--HHhhcCCCCe-EEEecCCccH-HHHHHHhCCCCcEEE
Confidence 932 333333 2334445666 8877766422 234444444444433
No 220
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.03 E-value=0.0018 Score=60.84 Aligned_cols=70 Identities=21% Similarity=0.299 Sum_probs=49.9
Q ss_pred CEEEEEccChHHHHHHHHHH-hcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc--CCEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~-~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--sDiV~ 241 (342)
.+|||||+|.||+..++.+. +.-++++. ++|+++... +.+.+.++ .....+.+++++++. .|+|+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~-~~~~~~~g----------~~~~~~~~~~~ll~~~~~D~V~ 71 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAA-QKVVEQYQ----------LNATVYPNDDSLLADENVDAVL 71 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHH-HHHHHHTT----------CCCEEESSHHHHHHCTTCCEEE
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHH-HHHHHHhC----------CCCeeeCCHHHHhcCCCCCEEE
Confidence 47999999999999999874 33578866 679886542 22222221 012345799999986 89999
Q ss_pred EcCCC
Q 019328 242 LHPVL 246 (342)
Q Consensus 242 l~lpl 246 (342)
+++|.
T Consensus 72 i~tp~ 76 (344)
T 3mz0_A 72 VTSWG 76 (344)
T ss_dssp ECSCG
T ss_pred ECCCc
Confidence 99993
No 221
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.03 E-value=0.0019 Score=60.77 Aligned_cols=104 Identities=19% Similarity=0.325 Sum_probs=60.0
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
++|+|||.|.+|..+|..++ ..|. +|..||++.+... .............. .........++ +.++.||+|++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la-~~g~~~V~L~Di~~~~l~-~~~~~l~~~~~~~~-~~~~i~~t~d~-~al~~aD~VI~av 90 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLG-QKDLGDVYMFDIIEGVPQ-GKALDLNHCMALIG-SPAKIFGENNY-EYLQNSDVVIITA 90 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSTTHHH-HHHHHHHHHHHHHT-CCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEECCHHHHH-HHHHHHHhHhhccC-CCCEEEECCCH-HHHCCCCEEEEcC
Confidence 68999999999999999875 4566 8999999865322 11111100000000 01112222566 6789999999998
Q ss_pred --CCCcc-ccc-cc--C----H---hHHccCCCCcEEEecCC
Q 019328 245 --VLDKT-TYH-LI--N----K---ERLATMKKEAILVNCSR 273 (342)
Q Consensus 245 --plt~~-t~~-li--~----~---~~l~~mk~gailIN~sR 273 (342)
|..+. |+. ++ | . +.+....|++++|+++-
T Consensus 91 g~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 91 GVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp SCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 43221 111 10 1 1 12223348899988765
No 222
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.02 E-value=0.00088 Score=58.80 Aligned_cols=97 Identities=14% Similarity=0.118 Sum_probs=56.1
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHH-hhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV-LREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el-l~~sDiV~l~l 244 (342)
++|.|+|+|.+|+.+|+.| ...|.+|.++|++++... ......+...-. + .......++++ ++++|+|++++
T Consensus 1 M~iiIiG~G~~G~~la~~L-~~~g~~v~vid~~~~~~~-~l~~~~~~~~i~-g----d~~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSM-LSRKYGVVIINKDRELCE-EFAKKLKATIIH-G----DGSHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp CCEEEECCHHHHHHHHHHH-HHTTCCEEEEESCHHHHH-HHHHHSSSEEEE-S----CTTSHHHHHHHTCCTTCEEEECC
T ss_pred CEEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHHH-HHHHHcCCeEEE-c----CCCCHHHHHhcCcccCCEEEEec
Confidence 3689999999999999998 578999999999876421 111111100000 0 00011124443 67899999999
Q ss_pred CCCcccccccCHhHHccCCCCcEEEec
Q 019328 245 VLDKTTYHLINKERLATMKKEAILVNC 271 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk~gailIN~ 271 (342)
|.... +++-....+.+.+...+|-.
T Consensus 74 ~~d~~--n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 74 PRDEV--NLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp SCHHH--HHHHHHHHHHTSCCCEEEEC
T ss_pred CCcHH--HHHHHHHHHHHcCCCeEEEE
Confidence 85443 33333444444344444433
No 223
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.00 E-value=0.0023 Score=60.83 Aligned_cols=65 Identities=14% Similarity=0.203 Sum_probs=46.8
Q ss_pred CEEEEEccChHHHH-HHHHHHhcC-CcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEE
Q 019328 166 QTVGVIGAGRIGSA-YARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (342)
Q Consensus 166 ktvGIiG~G~IG~~-vA~~l~~a~-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV 240 (342)
.+|||||+|.||+. .++.+ +.. ++++. ++|+++..... .+ .+...+.+++++++ +.|+|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~~~~----~~-----------~~~~~~~~~~~ll~~~~~D~V 71 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLI-RSVPGLNLAFVASRDEEKVKR----DL-----------PDVTVIASPEAAVQHPDVDLV 71 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHH-HTSTTEEEEEEECSCHHHHHH----HC-----------TTSEEESCHHHHHTCTTCSEE
T ss_pred ceEEEECCCHHHHHHHHHHH-hhCCCeEEEEEEcCCHHHHHh----hC-----------CCCcEECCHHHHhcCCCCCEE
Confidence 47999999999997 67766 444 78875 67888754211 11 01234579999998 78999
Q ss_pred EEcCCC
Q 019328 241 SLHPVL 246 (342)
Q Consensus 241 ~l~lpl 246 (342)
++|+|.
T Consensus 72 ~i~tp~ 77 (364)
T 3e82_A 72 VIASPN 77 (364)
T ss_dssp EECSCG
T ss_pred EEeCCh
Confidence 999994
No 224
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.99 E-value=0.004 Score=58.95 Aligned_cols=113 Identities=18% Similarity=0.155 Sum_probs=68.2
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV~l 242 (342)
.+|||||+|.||+.+++.+.+.-++++. ++|+++... ..+.+.++ . +.....+.+++++++ +.|+|++
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~-~~~a~~~~-------~-~~~~~~~~~~~~ll~~~~~D~V~i 77 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKA-KAFATANN-------Y-PESTKIHGSYESLLEDPEIDALYV 77 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHHTT-------C-CTTCEEESSHHHHHHCTTCCEEEE
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHH-HHHHHHhC-------C-CCCCeeeCCHHHHhcCCCCCEEEE
Confidence 4799999999999999987433467764 788886542 22222221 0 001123578999997 5999999
Q ss_pred cCCCCcccccccCHhHHccCCCCc-EEEec-CCCccCCHHHHHHHHHcCCcc
Q 019328 243 HPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~ga-ilIN~-sRG~~vd~~aL~~aL~~g~i~ 292 (342)
++| +.... +-..+.++.|. +++.- ---.+-+.+.|.++.++..+.
T Consensus 78 ~tp--~~~h~---~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 78 PLP--TSLHV---EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp CCC--GGGHH---HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred cCC--hHHHH---HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 999 33222 22334455665 44432 112223456788887776554
No 225
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.97 E-value=0.0019 Score=60.55 Aligned_cols=103 Identities=15% Similarity=0.170 Sum_probs=63.6
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
.+|||||+|+||+.+++.+.+.-++++. ++|++.... + . .+...+.++++++.++|+|++++
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~-------~-------~---~gv~~~~d~~~ll~~~DvViiat 66 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD-------T-------K---TPVFDVADVDKHADDVDVLFLCM 66 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS-------S-------S---SCEEEGGGGGGTTTTCSEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHh-------h-------c---CCCceeCCHHHHhcCCCEEEEcC
Confidence 4799999999999999987433367754 778764320 0 0 11223457788888899999999
Q ss_pred CCCcccccccCHhHHccCCCCcEEEecCCCcc-C-CH-HHHHHHHHcCC
Q 019328 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPV-I-DE-VALVEHLKQNP 290 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk~gailIN~sRG~~-v-d~-~aL~~aL~~g~ 290 (342)
|.... -+.....++.|.-++...-..+ + +. +.|.++.+++.
T Consensus 67 p~~~h-----~~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 67 GSATD-----IPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp CTTTH-----HHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred CcHHH-----HHHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 84321 1233455666766665443332 2 22 45666666544
No 226
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=96.96 E-value=0.15 Score=47.24 Aligned_cols=106 Identities=12% Similarity=0.064 Sum_probs=73.5
Q ss_pred ccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
.+.|++|+++|= +++.++.+..+ ..||++|....|..-...+...+. . ......++++.++++|+|
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~-~~~g~~v~~~~P~~~~~~~~~~~~-------~-----~~~~~~d~~eav~~aDvv 217 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVA-PLAGLKVRVATPKGYEPDPGLLKR-------A-----NAFFTHDPKEAALGAHAL 217 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHH-------H-----TCEEESCHHHHHTTCSEE
T ss_pred CcCCcEEEEECCCchhHHHHHHHH-HHcCCEEEEECCchhcCCHHHHhh-------c-----eeEEECCHHHHhcCCCEE
Confidence 478999999998 89999999987 589999999987532111111110 0 022357899999999999
Q ss_pred EEcCCCC------cc------cccccCHhHHccCCCCcEEEecC---CCccCCHH
Q 019328 241 SLHPVLD------KT------TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 241 ~l~lplt------~~------t~~li~~~~l~~mk~gailIN~s---RG~~vd~~ 280 (342)
..-.-.. +. ..--++.+.++.+||+++|.-+. ||.=|+.+
T Consensus 218 y~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~e 272 (301)
T 2ef0_A 218 YTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEE 272 (301)
T ss_dssp EECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred EecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCHH
Confidence 8843310 11 12346899999999999999886 67655544
No 227
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.95 E-value=0.0023 Score=62.86 Aligned_cols=77 Identities=16% Similarity=0.210 Sum_probs=51.0
Q ss_pred CCCEEEEEccChH--HHHHHHHHHh--c-CCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCC
Q 019328 164 KGQTVGVIGAGRI--GSAYARMMVE--G-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 164 ~gktvGIiG~G~I--G~~vA~~l~~--a-~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sD 238 (342)
+..+|+|||.|.+ |..+++.+++ . .| +|..||+.+... +.. ......+.. .........++++.++.||
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~l-e~~-~~~~~~l~~---~~~~I~~TtD~~eAl~dAD 77 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAA-QKN-EVIGNHSGN---GRWRYEAVSTLKKALSAAD 77 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHH-HHH-HHHHTTSTT---SCEEEEEESSHHHHHTTCS
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHH-HHH-HHHHHHHhc---cCCeEEEECCHHHHhcCCC
Confidence 4569999999998 5788877643 2 35 999999987532 111 111111111 2233344578999999999
Q ss_pred EEEEcCCC
Q 019328 239 VISLHPVL 246 (342)
Q Consensus 239 iV~l~lpl 246 (342)
+|+.+++-
T Consensus 78 fVI~airv 85 (450)
T 3fef_A 78 IVIISILP 85 (450)
T ss_dssp EEEECCCS
T ss_pred EEEecccc
Confidence 99999964
No 228
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.91 E-value=0.0019 Score=61.24 Aligned_cols=68 Identities=10% Similarity=0.142 Sum_probs=47.5
Q ss_pred CEEEEEccChHHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcC--CEEE
Q 019328 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA--DVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~-vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~s--DiV~ 241 (342)
.+|||||+|.||+. .++.+.+.-++++. ++|+++... +.+.+.+ + ....+.+++++++.. |+|+
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------~----~~~~~~~~~~ll~~~~vD~V~ 73 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERA-RRVHRFI-------S----DIPVLDNVPAMLNQVPLDAVV 73 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHH-GGGGGTS-------C----SCCEESSHHHHHHHSCCSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHH-HHHHHhc-------C----CCcccCCHHHHhcCCCCCEEE
Confidence 58999999999995 88887433378876 789987642 1111111 0 122357999999865 9999
Q ss_pred EcCC
Q 019328 242 LHPV 245 (342)
Q Consensus 242 l~lp 245 (342)
+|+|
T Consensus 74 i~tp 77 (359)
T 3m2t_A 74 MAGP 77 (359)
T ss_dssp ECSC
T ss_pred EcCC
Confidence 9999
No 229
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.91 E-value=0.0014 Score=60.89 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=59.1
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
.+|||||+|.||+.+++.+.+.-++++. ++|+++..... + + ..+....++.+. .++|+|++|+
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~-----~-------g---~~~~~~~~l~~~-~~~DvViiat 73 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF-----E-------L---QPFRVVSDIEQL-ESVDVALVCS 73 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC------------C-------C---TTSCEESSGGGS-SSCCEEEECS
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH-----c-------C---CCcCCHHHHHhC-CCCCEEEECC
Confidence 5899999999999999987444578887 68987653210 1 1 111223455555 7899999999
Q ss_pred CCCcccccccCHhHHccCCCCcEEEecCC--C-ccCCHHHHHHHHHcCC
Q 019328 245 VLDKTTYHLINKERLATMKKEAILVNCSR--G-PVIDEVALVEHLKQNP 290 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk~gailIN~sR--G-~~vd~~aL~~aL~~g~ 290 (342)
|. .+.. +-..+.++.|.-++...- + ...+.+.|.++.++..
T Consensus 74 p~--~~h~---~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g 117 (304)
T 3bio_A 74 PS--REVE---RTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSG 117 (304)
T ss_dssp CH--HHHH---HHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHT
T ss_pred Cc--hhhH---HHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCC
Confidence 93 2221 222334455666665421 2 2223345666655543
No 230
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.90 E-value=0.0036 Score=58.69 Aligned_cols=104 Identities=14% Similarity=0.205 Sum_probs=60.3
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
++|+|||.|.+|..+|..++ .-|. +|..+|.+.+.. +.............. .........++ +.++.||+|+++.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la-~~g~~~v~L~Di~~~~l-~~~~~~l~~~~~~~~-~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIV-QKNLGDVVLFDIVKNMP-HGKALDTSHTNVMAY-SNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHH-HHHHHHHHTHHHHHT-CCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeCCHHHH-HHHHHHHHhhhhhcC-CCcEEEECCCH-HHhCCCCEEEEeC
Confidence 58999999999999999975 4465 899999886532 111111110000000 11112222566 6789999999998
Q ss_pred --CCCccc------c-cc------cCHh---HHccCCCCcEEEecCC
Q 019328 245 --VLDKTT------Y-HL------INKE---RLATMKKEAILVNCSR 273 (342)
Q Consensus 245 --plt~~t------~-~l------i~~~---~l~~mk~gailIN~sR 273 (342)
|..+.- + .+ +-.+ .+....|++++|+++-
T Consensus 81 g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 127 (322)
T 1t2d_A 81 GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN 127 (322)
T ss_dssp SCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 544331 1 11 1112 2222358999998754
No 231
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.89 E-value=0.29 Score=45.76 Aligned_cols=114 Identities=18% Similarity=0.245 Sum_probs=73.0
Q ss_pred ccCCCEEEEEccC--hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 162 ~l~gktvGIiG~G--~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
.+.|++|+++|=| ++.++.+..+ ..||++|.+..|..-...+.+.+......+..+ .......++++.++++|+
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDv 239 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIAC-AKMGMNFVACGPEELKPRSDVFKRCQEIVKETD---GSVSFTSNLEEALAGADV 239 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHH-HHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHC---CEEEEESCHHHHHTTCSE
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHH-HHCCCEEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEcCHHHHHccCCE
Confidence 4789999999996 9999999987 589999999988532111111110000000111 112335789999999999
Q ss_pred EEEcCCC-------Ccc-----cccccCHhHHccC-CCCcEEEecC---CCccCCH
Q 019328 240 ISLHPVL-------DKT-----TYHLINKERLATM-KKEAILVNCS---RGPVIDE 279 (342)
Q Consensus 240 V~l~lpl-------t~~-----t~~li~~~~l~~m-k~gailIN~s---RG~~vd~ 279 (342)
|..-.-. .++ ..--++++.++.+ ||+++|.-+. ||.=|+.
T Consensus 240 vyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP~~Rg~EI~~ 295 (325)
T 1vlv_A 240 VYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTY 295 (325)
T ss_dssp EEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCH
T ss_pred EEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCCCCCCcccCH
Confidence 9885331 011 1234688999999 9999998874 4554443
No 232
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.88 E-value=0.00035 Score=63.21 Aligned_cols=102 Identities=20% Similarity=0.254 Sum_probs=64.4
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCCh-------------------hhHHHHHHhhhhhhhccCCCC
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-------------------ATRLEKFVTAYGQFLKANGEQ 220 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~ 220 (342)
..|.+++|.|||.|.+|..+|+.|+ ..|. ++..+|+.. .+ .+...+.+... ....
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La-~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~K-a~~~~~~l~~~---np~~ 101 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLA-SAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPK-VESARDALTRI---NPHI 101 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBH-HHHHHHHHHHH---CTTS
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHH-HcCCCeEEEEcCCCcccccCCcccccChhhcCcHH-HHHHHHHHHHH---CCCc
Confidence 4689999999999999999999984 6786 899999875 21 11111111100 0000
Q ss_pred Cccc-c---ccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEec
Q 019328 221 PVTW-K---RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (342)
Q Consensus 221 ~~~~-~---~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~ 271 (342)
.+.. . ...+++++++++|+|+.+++ +.+++.++++...+. +..+|+.
T Consensus 102 ~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 102 AITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp EEEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred EEEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 0000 0 01245678899999999987 577888887766553 3345554
No 233
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.87 E-value=0.08 Score=49.75 Aligned_cols=191 Identities=16% Similarity=0.142 Sum_probs=108.8
Q ss_pred HHHHhCCCeEEEecCCCCC----CCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEcccccCccChhHHH
Q 019328 31 NLLIEQDCRVEICTQKKTI----LSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (342)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~G~d~id~~~a~ 106 (342)
....+.|..+......+.. .+-.+...-+..-+|+++++.. ....+..+ |+
T Consensus 64 ~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~IviR~~---~~~~~~~l----------------------A~ 118 (333)
T 1duv_G 64 VAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGY---GQEIVETL----------------------AE 118 (333)
T ss_dssp HHHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHTTTCSEEEEECS---CHHHHHHH----------------------HH
T ss_pred HHHHHcCCeEEEECCccccCcCCCcHHHHHHHHHHhCCEEEEEcC---CchHHHHH----------------------HH
Confidence 3455677777665433211 2444555555545687777743 23322222 23
Q ss_pred hCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccC--hHHHHHHHHH
Q 019328 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG--RIGSAYARMM 184 (342)
Q Consensus 107 ~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G--~IG~~vA~~l 184 (342)
-.+|+|.|.-+....+.- +|+=++.+.+++ .|..+.|.+|++||=| ++.++.+..+
T Consensus 119 ~~~vPVINa~~~~~HPtQ--~LaDl~Ti~e~~--------------------~g~~l~gl~ia~vGD~~~~va~Sl~~~~ 176 (333)
T 1duv_G 119 YASVPVWNGLTNEFHPTQ--LLADLLTMQEHL--------------------PGKAFNEMTLVYAGDARNNMGNSMLEAA 176 (333)
T ss_dssp HHSSCEEESCCSSCCHHH--HHHHHHHHHHHS--------------------TTCCGGGCEEEEESCTTSHHHHHHHHHH
T ss_pred hCCCCeEcCCCCCCCchH--HHHHHHHHHHHh--------------------cCCCCCCcEEEEECCCccchHHHHHHHH
Confidence 336999996654333322 222223222220 1225889999999986 9999999987
Q ss_pred HhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCC--Cc------c-----cc
Q 019328 185 VEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL--DK------T-----TY 251 (342)
Q Consensus 185 ~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lpl--t~------~-----t~ 251 (342)
..||++|.+..|..-...+.+.+......+..+ .......++++.++++|+|..-.-. .. + ..
T Consensus 177 -~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~~ 252 (333)
T 1duv_G 177 -ALTGLDLRLVAPQACWPEAALVTECRALAQQNG---GNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRE 252 (333)
T ss_dssp -HHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTT---CEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGG
T ss_pred -HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhhc
Confidence 579999999988532111111110000000111 1223357999999999999885431 10 0 12
Q ss_pred cccCHhHHccC-CCCcEEEecC
Q 019328 252 HLINKERLATM-KKEAILVNCS 272 (342)
Q Consensus 252 ~li~~~~l~~m-k~gailIN~s 272 (342)
--++.+.++.+ ||+++|.-+.
T Consensus 253 y~v~~~ll~~a~~~~ai~mHcL 274 (333)
T 1duv_G 253 YQVNSKMMQLTGNPEVKFLHCL 274 (333)
T ss_dssp GCBCHHHHHTTCCTTCEEEECS
T ss_pred cccCHHHHHhccCCCcEEECCC
Confidence 35689999999 9999998773
No 234
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.86 E-value=0.0025 Score=59.61 Aligned_cols=104 Identities=17% Similarity=0.250 Sum_probs=59.1
Q ss_pred CCEEEEEccChHHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~-a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
-++|+|||.|.||..+|..++. ++.-+|..+|++... .+............ ........ .+..+.++.||+|+++
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~-~~~~~~dl~~~~~~-~~~~~~i~--~~~~~al~~aDvViia 81 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK-AIGDAMDFNHGKVF-APKPVDIW--HGDYDDCRDADLVVIC 81 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH-HHHHHHHHHHHTTS-SSSCCEEE--ECCGGGTTTCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcch-HHHHHhhHHHHhhh-cCCCeEEE--cCcHHHhCCCCEEEEc
Confidence 3689999999999999998742 333489999998652 22211111110000 00011111 2345678999999999
Q ss_pred CCCCcccccc-----c--C----H---hHHccCCCCcEEEecCC
Q 019328 244 PVLDKTTYHL-----I--N----K---ERLATMKKEAILVNCSR 273 (342)
Q Consensus 244 lplt~~t~~l-----i--~----~---~~l~~mk~gailIN~sR 273 (342)
.|... ..++ + | . +.+....|++++++++-
T Consensus 82 ~~~~~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 82 AGANQ-KPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp CSCCC-CTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCC-CCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 76432 1111 1 0 1 12233358889999855
No 235
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.85 E-value=0.0014 Score=59.09 Aligned_cols=82 Identities=16% Similarity=0.145 Sum_probs=52.9
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEE-EcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
.+|+|+|+|+||+.+++.+. ..+-++.+ +|+..... .+...+.++++++ ++|+|+-+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~-~~~~eLva~~d~~~~~~-------------------~gv~v~~dl~~l~-~~DVvIDft 62 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAE-EKGHEIVGVIENTPKAT-------------------TPYQQYQHIADVK-GADVAIDFS 62 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCC---------------------CCSCBCSCTTTCT-TCSEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHH-hCCCEEEEEEecCcccc-------------------CCCceeCCHHHHh-CCCEEEEeC
Confidence 58999999999999999874 44337654 78765420 1222346888888 899988544
Q ss_pred CCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 245 VLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
+- ..+. +.++ ++.|.-+|....|-
T Consensus 63 ~p-~a~~-----~~~~-l~~g~~vVigTTG~ 86 (243)
T 3qy9_A 63 NP-NLLF-----PLLD-EDFHLPLVVATTGE 86 (243)
T ss_dssp CH-HHHH-----HHHT-SCCCCCEEECCCSS
T ss_pred Ch-HHHH-----HHHH-HhcCCceEeCCCCC
Confidence 31 2222 2334 77777777666663
No 236
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.82 E-value=0.31 Score=45.34 Aligned_cols=114 Identities=16% Similarity=0.193 Sum_probs=73.5
Q ss_pred ccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
.+.|++|++||= +++.++.+..+ ..||++|.+..|..-...+...+......+..+ .......++++.++++|+|
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~-~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~~~~~~d~~eav~~aDvv 227 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAG-TKLGADVVVATPEGYEPDEKVIKWAEQNAAESG---GSFELLHDPVKAVKDADVI 227 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CEEEEESCHHHHTTTCSEE
T ss_pred CcCCcEEEEECCCcchHHHHHHHH-HHCCCEEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEeCHHHHhCCCCEE
Confidence 478999999997 89999999987 589999999987532111111110000000001 1123357899999999999
Q ss_pred EEcCCC-------Ccc-----cccccCHhHHccCCCCcEEEecC---CCccCCH
Q 019328 241 SLHPVL-------DKT-----TYHLINKERLATMKKEAILVNCS---RGPVIDE 279 (342)
Q Consensus 241 ~l~lpl-------t~~-----t~~li~~~~l~~mk~gailIN~s---RG~~vd~ 279 (342)
..-.-. .++ ..--++.+.++.+||+++|.-+. ||.=|+.
T Consensus 228 y~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~~ 281 (315)
T 1pvv_A 228 YTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTD 281 (315)
T ss_dssp EECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCH
T ss_pred EEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCCCCCCCccCH
Confidence 885431 111 12346889999999999998874 5554444
No 237
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.81 E-value=0.0024 Score=63.22 Aligned_cols=128 Identities=10% Similarity=0.186 Sum_probs=75.0
Q ss_pred CCEEEEEccChH--HHHHHHHHH--hcC-CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 165 GQTVGVIGAGRI--GSAYARMMV--EGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 165 gktvGIiG~G~I--G~~vA~~l~--~a~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
..+|+|||.|.+ |.++|..|+ .++ |.+|..||+....... ..+.....+.. ...+.......++++.++.||+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~-~~~~~~~~l~~-~~~~~~I~~ttD~~eal~dAD~ 80 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDA-ILTIAKKYVEE-VGADLKFEKTMNLDDVIIDADF 80 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHH-HHHHHHHHHHH-TTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHH-HHHHHHHHhcc-CCCCcEEEEECCHHHHhCCCCE
Confidence 468999999997 465566654 244 7899999998754211 11111111111 1112223334688888999999
Q ss_pred EEEcCCCC---------------------cccc-------ccc----C-------HhHHccCCCCcEEEecCCCccCCHH
Q 019328 240 ISLHPVLD---------------------KTTY-------HLI----N-------KERLATMKKEAILVNCSRGPVIDEV 280 (342)
Q Consensus 240 V~l~lplt---------------------~~t~-------~li----~-------~~~l~~mk~gailIN~sRG~~vd~~ 280 (342)
|++++|.. .+|. +++ + .+.+....|++++||++----+-+.
T Consensus 81 VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~ 160 (480)
T 1obb_A 81 VINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTT 160 (480)
T ss_dssp EEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHH
T ss_pred EEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHH
Confidence 99999731 1110 111 0 1334445699999999876544455
Q ss_pred HHHHHHHcCCccEEE
Q 019328 281 ALVEHLKQNPMFRVG 295 (342)
Q Consensus 281 aL~~aL~~g~i~gaa 295 (342)
++.+ +...++.|.+
T Consensus 161 ~~~k-~p~~rviG~c 174 (480)
T 1obb_A 161 LVTR-TVPIKAVGFC 174 (480)
T ss_dssp HHHH-HSCSEEEEEC
T ss_pred HHHH-CCCCcEEecC
Confidence 5544 5555666664
No 238
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.77 E-value=0.0026 Score=57.67 Aligned_cols=99 Identities=19% Similarity=0.240 Sum_probs=68.5
Q ss_pred cCCCEEEEEccChHHHHHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 163 l~gktvGIiG~G~IG~~vA~~l~~a~g~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
-+..+|+++|+|.||+.+++. . ++++ .+|+ .+. ++. +.....+++++++++|+|+
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~---~-~leLv~v~~--~k~----------------gel--gv~a~~d~d~lla~pD~VV 65 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL---G-NFEKIYAYD--RIS----------------KDI--PGVVRLDEFQVPSDVSTVV 65 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH---S-CCSEEEEEC--SSC----------------CCC--SSSEECSSCCCCTTCCEEE
T ss_pred cccceEEEECcCHHHHHHHhc---C-CcEEEEEEe--ccc----------------ccc--CceeeCCHHHHhhCCCEEE
Confidence 456799999999999999986 3 6664 4566 111 111 2223467899988999999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCH---HHHHHHHHcCC
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE---VALVEHLKQNP 290 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~---~aL~~aL~~g~ 290 (342)
=|.+ .+ -+.+...+.++.|.-+|-+|-|.+.|. +.|.++-++|.
T Consensus 66 e~A~--~~---av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg 112 (253)
T 1j5p_A 66 ECAS--PE---AVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSP 112 (253)
T ss_dssp ECSC--HH---HHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCS
T ss_pred ECCC--HH---HHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCC
Confidence 8875 21 233346677899999999999999887 45555555554
No 239
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.73 E-value=0.0012 Score=64.24 Aligned_cols=93 Identities=16% Similarity=0.170 Sum_probs=58.3
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCC---HHHH-hhcCCEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVI 240 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~sDiV 240 (342)
+.+|.|+|+|++|+.+|+.| ...|.+|++.|+++...... +..+..-. .....+ |.++ +.++|+|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L-~~~g~~vvvId~d~~~v~~~---------~~~g~~vi-~GDat~~~~L~~agi~~A~~v 72 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLL-LSSGVKMVVLDHDPDHIETL---------RKFGMKVF-YGDATRMDLLESAGAAKAEVL 72 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHH-HHTTCCEEEEECCHHHHHHH---------HHTTCCCE-ESCTTCHHHHHHTTTTTCSEE
T ss_pred CCeEEEECCCHHHHHHHHHH-HHCCCCEEEEECCHHHHHHH---------HhCCCeEE-EcCCCCHHHHHhcCCCccCEE
Confidence 35699999999999999998 68899999999987642211 11111111 111223 3333 6789999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEe
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVN 270 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN 270 (342)
+++++.... ++.-....+.+.|...+|-
T Consensus 73 iv~~~~~~~--n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 73 INAIDDPQT--NLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp EECCSSHHH--HHHHHHHHHHHCTTCEEEE
T ss_pred EECCCChHH--HHHHHHHHHHhCCCCeEEE
Confidence 999995443 3333445555566644443
No 240
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.72 E-value=0.0043 Score=58.02 Aligned_cols=68 Identities=13% Similarity=0.212 Sum_probs=47.9
Q ss_pred CEEEEEccChHHHHHHHHHHhcCC---cEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFK---MNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g---~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDi 239 (342)
.++||||+|.||+..++.+ +..+ +++. ++|+++.. .+.+.+.++ .. ..+.+++++++ +.|+
T Consensus 3 ~rigiiG~G~ig~~~~~~l-~~~~~~~~~l~av~d~~~~~-a~~~a~~~~-------~~----~~~~~~~~ll~~~~vD~ 69 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVL-QTLPRSEHQVVAVAARDLSR-AKEFAQKHD-------IP----KAYGSYEELAKDPNVEV 69 (334)
T ss_dssp EEEEEECCSHHHHHHHHHH-TTSCTTTEEEEEEECSSHHH-HHHHHHHHT-------CS----CEESSHHHHHHCTTCCE
T ss_pred cEEEEECchHHHHHHHHHH-HhCCCCCeEEEEEEcCCHHH-HHHHHHHcC-------CC----cccCCHHHHhcCCCCCE
Confidence 4899999999999999987 4443 5654 67888654 233333332 10 13579999997 6999
Q ss_pred EEEcCCC
Q 019328 240 ISLHPVL 246 (342)
Q Consensus 240 V~l~lpl 246 (342)
|++++|.
T Consensus 70 V~i~tp~ 76 (334)
T 3ohs_X 70 AYVGTQH 76 (334)
T ss_dssp EEECCCG
T ss_pred EEECCCc
Confidence 9999993
No 241
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.71 E-value=0.009 Score=55.33 Aligned_cols=105 Identities=18% Similarity=0.208 Sum_probs=59.6
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHH-HHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLE-KFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
..++|+|||.|.||..+|..|+ ..|. +|..+|++...... .....-+.... . ........+. +.++.||+|
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~-~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~--~--~~~v~~~~~~-~~~~~aD~V 79 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAA-QRGIAREIVLEDIAKERVEAEVLDMQHGSSFY--P--TVSIDGSDDP-EICRDADMV 79 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSSHHHHHHHHHHHHHTGGGS--T--TCEEEEESCG-GGGTTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCChhHHHHHHHHHHhhhhhc--C--CeEEEeCCCH-HHhCCCCEE
Confidence 3468999999999999999974 5577 99999998643210 11000000000 0 1111111233 467899999
Q ss_pred EEcCCCCcccccc------------cC--HhHHccCCCCcEEEecCCCc
Q 019328 241 SLHPVLDKTTYHL------------IN--KERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 241 ~l~lplt~~t~~l------------i~--~~~l~~mk~gailIN~sRG~ 275 (342)
+++++... ..+. +. .+.++...+++++|+++-|-
T Consensus 80 ii~v~~~~-~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 80 VITAGPRQ-KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp EECCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred EECCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 99996322 1110 00 11222236888999987764
No 242
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.0027 Score=62.69 Aligned_cols=81 Identities=16% Similarity=0.208 Sum_probs=50.6
Q ss_pred cccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCC--ccccccCCHHHHhhc
Q 019328 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--VTWKRASSMDEVLRE 236 (342)
Q Consensus 159 ~g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ell~~ 236 (342)
.+..+.+++|.|+|.|.+|+.+++.|++..|.+|.+++|+..+. +...+.. +... .......++.++++.
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka-~~la~~~-------~~~~~~~D~~d~~~l~~~l~~ 88 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANA-QALAKPS-------GSKAISLDVTDDSALDKVLAD 88 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHH-HHHHGGG-------TCEEEECCTTCHHHHHHHHHT
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHhc-------CCcEEEEecCCHHHHHHHHcC
Confidence 45678999999999999999999998543478999999986542 2211110 1000 000111256678889
Q ss_pred CCEEEEcCCCC
Q 019328 237 ADVISLHPVLD 247 (342)
Q Consensus 237 sDiV~l~lplt 247 (342)
+|+|+.++|..
T Consensus 89 ~DvVIn~tp~~ 99 (467)
T 2axq_A 89 NDVVISLIPYT 99 (467)
T ss_dssp SSEEEECSCGG
T ss_pred CCEEEECCchh
Confidence 99999999953
No 243
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.69 E-value=0.058 Score=50.07 Aligned_cols=93 Identities=22% Similarity=0.307 Sum_probs=66.3
Q ss_pred ccCCCEEEEEccC---hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCC
Q 019328 162 LLKGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 162 ~l~gktvGIiG~G---~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sD 238 (342)
.+.|+||++||=| ++.++.+..+ ..||++|.+..|..-. ... ...+ ...++++.++++|
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~--------------~~~-~~~g--~~~d~~eav~~aD 205 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVL-TRLGARVLFSGPSEWQ--------------DEE-NTFG--TYVSMDEAVESSD 205 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHH-HHTTCEEEEESCGGGS--------------CTT-CSSC--EECCHHHHHHHCS
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHH-HHcCCEEEEECCCccC--------------cch-hhcC--ccCCHHHHhCCCC
Confidence 4789999999975 6999999987 6899999998874211 000 0111 2458999999999
Q ss_pred EEEEcCCCCcc-----------cccccCHhHHccCCCCcEEEecC
Q 019328 239 VISLHPVLDKT-----------TYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 239 iV~l~lplt~~-----------t~~li~~~~l~~mk~gailIN~s 272 (342)
+|..-.-..+. ..--++.+.++.+|++++|.-+.
T Consensus 206 vvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 206 VVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp EEEECCCCTTTCCSSCCSTTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred EEEeccchhhccccchhHHHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 99885321111 11236889999999999998775
No 244
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.68 E-value=0.0048 Score=57.94 Aligned_cols=68 Identities=12% Similarity=0.145 Sum_probs=47.3
Q ss_pred CEEEEEccChHHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc--CCEEE
Q 019328 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~-vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--sDiV~ 241 (342)
.++||||+|.||+. .+..+.+.-+++|. ++|+++.. .+++.+.|+. ...+.+++++++. .|+|+
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~-a~~~a~~~g~-----------~~~y~d~~ell~~~~iDaV~ 91 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTR-AREMADRFSV-----------PHAFGSYEEMLASDVIDAVY 91 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHH-HHHHHHHHTC-----------SEEESSHHHHHHCSSCSEEE
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHH-HHHHHHHcCC-----------CeeeCCHHHHhcCCCCCEEE
Confidence 48999999999985 46665333478876 57888754 3334343321 1235799999964 79999
Q ss_pred EcCC
Q 019328 242 LHPV 245 (342)
Q Consensus 242 l~lp 245 (342)
+++|
T Consensus 92 I~tP 95 (350)
T 4had_A 92 IPLP 95 (350)
T ss_dssp ECSC
T ss_pred EeCC
Confidence 9999
No 245
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.66 E-value=0.017 Score=56.28 Aligned_cols=118 Identities=16% Similarity=0.252 Sum_probs=72.6
Q ss_pred ccccCCCEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCC---------hhhHHHHHHhhhhhhhccCCCCCccccccCC
Q 019328 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (342)
Q Consensus 160 g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (342)
|.++.|+||.|.|+|++|+.+|+.| ...|++|+ +.|.+ ......++.+..+. ..........+
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L-~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~------i~~y~~a~~i~ 302 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAF-HDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGG------VRGYPKAEPLP 302 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSS------STTCTTSEECC
T ss_pred CCCccCCEEEEeccCHHHHHHHHHH-HHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCC------cccCCCceEcC
Confidence 3478999999999999999999997 68899998 44442 11112222221110 00000011234
Q ss_pred HHHHh-hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 230 MDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 230 l~ell-~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
.++++ ..||+++-|.. .+.|+.+....++ -.+++-.+-+.+- .++ .+.|.+..+.
T Consensus 303 ~~ei~~~~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~t-~eA-~~iL~~~GI~ 358 (440)
T 3aog_A 303 AADFWGLPVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPTT-PAA-DDILLEKGVL 358 (440)
T ss_dssp HHHHTTCCCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCBC-HHH-HHHHHHHTCE
T ss_pred chhhhcCCCcEEEecCC-----cCccchhhHHHcC-CcEEEecCccccC-HHH-HHHHHHCCCE
Confidence 56665 47999998855 4557777777774 5678888888864 333 3455555443
No 246
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.65 E-value=0.0024 Score=58.99 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=64.7
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEE
Q 019328 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (342)
Q Consensus 165 gktvGIiG~-G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV 240 (342)
..+|+|+|+ |++|+..++.+ +..|.+++ .+||..... ...+...+.+++++.+ ..|++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l-~~~g~~~V~~V~p~~~g~-----------------~~~G~~vy~sl~el~~~~~~D~v 68 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQA-IAYGTKMVGGVTPGKGGT-----------------THLGLPVFNTVREAVAATGATAS 68 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTTC-----------------EETTEEEESSHHHHHHHHCCCEE
T ss_pred CCEEEEECCCChHHHHHHHHH-HHCCCeEEEEeCCCcccc-----------------eeCCeeccCCHHHHhhcCCCCEE
Confidence 468999999 99999999987 45688844 566642100 0012234578999998 89999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCCCcc-CCHHHHHHHHHcCCc
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPM 291 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~-vd~~aL~~aL~~g~i 291 (342)
++++| ++...-+-.+.++ .... .+|..+-|-- -+.+.|.++.++..+
T Consensus 69 iI~tP--~~~~~~~~~ea~~-~Gi~-~iVi~t~G~~~~~~~~l~~~A~~~gv 116 (288)
T 2nu8_A 69 VIYVP--APFCKDSILEAID-AGIK-LIITITEGIPTLDMLTVKVKLDEAGV 116 (288)
T ss_dssp EECCC--GGGHHHHHHHHHH-TTCS-EEEECCCCCCHHHHHHHHHHHHHHTC
T ss_pred EEecC--HHHHHHHHHHHHH-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 99999 3332222222332 2223 3344554532 245588888877554
No 247
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.63 E-value=0.0074 Score=55.20 Aligned_cols=106 Identities=15% Similarity=0.200 Sum_probs=66.3
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
.++++.|||.|.+|+.++..| ...|+ +|.+++|+.++. +++.+.++. .+ ..++. +.++|+|+.
T Consensus 118 ~~~~vlvlGaGgaarav~~~L-~~~G~~~i~v~nRt~~ka-~~la~~~~~----------~~--~~~~~--~~~~DivIn 181 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAF-KNSGFEKLKIYARNVKTG-QYLAALYGY----------AY--INSLE--NQQADILVN 181 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHH-HHTTCCCEEEECSCHHHH-HHHHHHHTC----------EE--ESCCT--TCCCSEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HHHHHHcCC----------cc--chhhh--cccCCEEEE
Confidence 468999999999999999997 57897 799999997542 222222210 01 11222 468999999
Q ss_pred cCCCCcccc-----cccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 243 HPVLDKTTY-----HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 243 ~lplt~~t~-----~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
++|..-... -.+..+. ++++.+++++.-.+ .++.-|.+|-+.|
T Consensus 182 aTp~gm~~~~~~~~~~~~~~~---l~~~~~v~DlvY~P-~~T~ll~~A~~~G 229 (271)
T 1npy_A 182 VTSIGMKGGKEEMDLAFPKAF---IDNASVAFDVVAMP-VETPFIRYAQARG 229 (271)
T ss_dssp CSSTTCTTSTTTTSCSSCHHH---HHHCSEEEECCCSS-SSCHHHHHHHHTT
T ss_pred CCCCCccCccccCCCCCCHHH---cCCCCEEEEeecCC-CCCHHHHHHHHCC
Confidence 999654211 1133333 35688899987644 3443334444444
No 248
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.62 E-value=0.0035 Score=55.46 Aligned_cols=92 Identities=10% Similarity=0.150 Sum_probs=56.7
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCC---HHHH-hhcCCEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVI 240 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~sDiV 240 (342)
.+++.|+|+|.+|+.+|+.| ...|. |+++|+++..... ... +.. .......+ ++++ ++++|.|
T Consensus 9 ~~~viI~G~G~~G~~la~~L-~~~g~-v~vid~~~~~~~~-~~~---------~~~-~i~gd~~~~~~l~~a~i~~ad~v 75 (234)
T 2aef_A 9 SRHVVICGWSESTLECLREL-RGSEV-FVLAEDENVRKKV-LRS---------GAN-FVHGDPTRVSDLEKANVRGARAV 75 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHS-TTSEE-EEEESCGGGHHHH-HHT---------TCE-EEESCTTCHHHHHHTTCTTCSEE
T ss_pred CCEEEEECCChHHHHHHHHH-HhCCe-EEEEECCHHHHHH-Hhc---------CCe-EEEcCCCCHHHHHhcCcchhcEE
Confidence 46899999999999999997 68888 9999998754211 101 100 00001122 3333 6789999
Q ss_pred EEcCCCCcccccccCHhHHccCCCC-cEEEec
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKE-AILVNC 271 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~g-ailIN~ 271 (342)
++++|... .++.-....+.+.++ .++..+
T Consensus 76 i~~~~~d~--~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 76 IVDLESDS--ETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp EECCSCHH--HHHHHHHHHHHHCSSSEEEEEC
T ss_pred EEcCCCcH--HHHHHHHHHHHHCCCCeEEEEE
Confidence 99998443 333444455666676 444443
No 249
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.62 E-value=0.064 Score=49.83 Aligned_cols=114 Identities=16% Similarity=0.143 Sum_probs=72.7
Q ss_pred ccCCCEEEEEccC--hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 162 ~l~gktvGIiG~G--~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
.+.|++|+++|=| ++.++.+..+ ..||++|....|..-...+.+.+......+..+ .......++++.++++|+
T Consensus 145 ~l~gl~va~vGD~~~rva~Sl~~~~-~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G---~~~~~~~d~~eav~~aDv 220 (307)
T 2i6u_A 145 ALRGLRLSYFGDGANNMAHSLLLGG-VTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTG---ASVTVTADAHAAAAGADV 220 (307)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-HHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSE
T ss_pred CcCCeEEEEECCCCcCcHHHHHHHH-HHCCCEEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEECHHHHhcCCCE
Confidence 4789999999986 9999999987 589999999987532111111110000000111 112335789999999999
Q ss_pred EEEcCCC-------Ccc-----cccccCHhHHccCCCCcEEEecC---CCccCCH
Q 019328 240 ISLHPVL-------DKT-----TYHLINKERLATMKKEAILVNCS---RGPVIDE 279 (342)
Q Consensus 240 V~l~lpl-------t~~-----t~~li~~~~l~~mk~gailIN~s---RG~~vd~ 279 (342)
|..-.-. .++ ..--++++.++.+||+++|.-+. ||.=|+.
T Consensus 221 vy~~~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~ 275 (307)
T 2i6u_A 221 LVTDTWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITD 275 (307)
T ss_dssp EEECCSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCH
T ss_pred EEecceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCCCCCCCcccCH
Confidence 9984330 011 12346888999999999998774 4554443
No 250
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=96.61 E-value=0.28 Score=45.83 Aligned_cols=114 Identities=17% Similarity=0.131 Sum_probs=71.6
Q ss_pred ccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
.+.|+||++||= +++.++.+..+ ..+|++|.+..|..-...+.+.+......+..+ .......++++.++++|+|
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~v~~~~d~~eav~~aDvv 229 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGC-AKVGMSIAVATPEGFTPDPAVSARASEIAGRTG---AEVQILRDPFEAARGAHIL 229 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCCcHHHHHHHHH-HHcCCEEEEECCCcccCCHHHHHHHHHHHHHcC---CeEEEECCHHHHhcCCCEE
Confidence 478999999996 67888888886 579999999887531111111110000000001 1223457999999999999
Q ss_pred EEcCCCCc-------c-----cccccCHhHHccCCCCcEEEecC---CCccCCH
Q 019328 241 SLHPVLDK-------T-----TYHLINKERLATMKKEAILVNCS---RGPVIDE 279 (342)
Q Consensus 241 ~l~lplt~-------~-----t~~li~~~~l~~mk~gailIN~s---RG~~vd~ 279 (342)
..-.-... + ..--++.+.++.+||+++|.-+. ||.=|+.
T Consensus 230 yt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHclPa~Rg~EI~~ 283 (323)
T 3gd5_A 230 YTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEITD 283 (323)
T ss_dssp EECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTTTBCH
T ss_pred EEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCCCCCCCceeCH
Confidence 87643111 0 01246899999999999998764 6654544
No 251
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.58 E-value=0.0073 Score=56.77 Aligned_cols=105 Identities=19% Similarity=0.227 Sum_probs=59.9
Q ss_pred cCCCEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 163 l~gktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
-.+++|+|||.|.||..+|..|+ ..|. ++..+|...... +............ ..... ...+..+.++.||+|
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~-~~~~~~el~l~D~~~~k~-~g~a~DL~~~~~~--~~~~~--i~~~~~~a~~~aDiV 80 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMV-LQGIAQEIGIVDIFKDKT-KGDAIDLEDALPF--TSPKK--IYSAEYSDAKDADLV 80 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSCHHHH-HHHHHHHHTTGGG--SCCCE--EEECCGGGGTTCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEeCChHHH-HHHHhhHhhhhhh--cCCcE--EEECcHHHhcCCCEE
Confidence 45679999999999999999874 3344 899999976532 1111111000000 00111 112345678999999
Q ss_pred EEcCCCC--c-ccc-ccc--C-------HhHHccCCCCcEEEecCC
Q 019328 241 SLHPVLD--K-TTY-HLI--N-------KERLATMKKEAILVNCSR 273 (342)
Q Consensus 241 ~l~lplt--~-~t~-~li--~-------~~~l~~mk~gailIN~sR 273 (342)
+++.... | +|| .++ | .+.+....|++++++++-
T Consensus 81 vi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp EECCCCC----------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred EECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 9986432 2 123 222 1 134455678999999974
No 252
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.54 E-value=0.0015 Score=62.38 Aligned_cols=38 Identities=26% Similarity=0.503 Sum_probs=34.6
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChh
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~ 200 (342)
.+.|++|||+|.|.+|+.+++.+ +.+|++|+++|+++.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa-~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSA-QKMGYKVVVLDPSED 46 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCC
Confidence 56899999999999999999996 799999999998764
No 253
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.54 E-value=0.0031 Score=59.96 Aligned_cols=73 Identities=21% Similarity=0.190 Sum_probs=47.6
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
+.++|+|+|.|.+|+.+|+.|+ . ..+|.+.|++.+.. +...+. .. ..........++.++++++|+|+.+
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~-~-~~~v~~~~~~~~~~-~~~~~~----~~---~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLK-D-EFDVYIGDVNNENL-EKVKEF----AT---PLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHT-T-TSEEEEEESCHHHH-HHHTTT----SE---EEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CccEEEEECCCHHHHHHHHHHh-c-CCCeEEEEcCHHHH-HHHhcc----CC---cEEEecCCHHHHHHHHhCCCEEEEe
Confidence 3447999999999999999974 3 46888889876542 111100 00 0001111234678889999999999
Q ss_pred CCC
Q 019328 244 PVL 246 (342)
Q Consensus 244 lpl 246 (342)
+|.
T Consensus 85 ~p~ 87 (365)
T 3abi_A 85 LPG 87 (365)
T ss_dssp CCG
T ss_pred cCC
Confidence 993
No 254
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.51 E-value=0.032 Score=51.72 Aligned_cols=100 Identities=16% Similarity=0.220 Sum_probs=69.4
Q ss_pred ccCCCEEEEEcc---ChHHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcC
Q 019328 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 162 ~l~gktvGIiG~---G~IG~~vA~~l~~a~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~s 237 (342)
.+.|++|+++|= |++.++.+..+ ..| |++|.+..|..-...+.. ++. .+.......++++.++++
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~~g~~v~~~~P~~~~~~~~~-------~~~---~g~~~~~~~d~~eav~~a 214 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRIL-TRFRPKLVYLISPQLLRARKEI-------LDE---LNYPVKEVENPFEVINEV 214 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHG-GGSCCSEEEEECCGGGCCCHHH-------HTT---CCSCEEEESCGGGTGGGC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HhCCCCEEEEECCchhcCCHHH-------HHH---cCCeEEEeCCHHHHhcCC
Confidence 478999999998 59999999986 689 999999988532111110 111 111223347899999999
Q ss_pred CEEEEcCCCCcc------c-----ccccCHhHHccCCCCcEEEecC
Q 019328 238 DVISLHPVLDKT------T-----YHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 238 DiV~l~lplt~~------t-----~~li~~~~l~~mk~gailIN~s 272 (342)
|+|..-.-..+. - .--++.+.++.+||+++|.-+.
T Consensus 215 Dvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 260 (299)
T 1pg5_A 215 DVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPL 260 (299)
T ss_dssp SEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCS
T ss_pred CEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCC
Confidence 999876553311 1 2346888899999999888764
No 255
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.49 E-value=0.011 Score=58.06 Aligned_cols=103 Identities=17% Similarity=0.239 Sum_probs=70.5
Q ss_pred ccccCCCEEEEEccC----------hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCC
Q 019328 160 GNLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (342)
Q Consensus 160 g~~l~gktvGIiG~G----------~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (342)
+..+.|++|+|+|+- .-...+++.| ...|++|.+|||....... ..| . ......+
T Consensus 317 ~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L-~~~g~~v~~~DP~~~~~~~---~~~---------~--~~~~~~~ 381 (446)
T 4a7p_A 317 GGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAAL-QDAGATVKAYDPEGVEQAS---KML---------T--DVEFVEN 381 (446)
T ss_dssp TSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHH-HHTSCEEEEECSSCHHHHG---GGC---------S--SCCBCSC
T ss_pred cccCCCCEEEEEEEEeCCCCcccccChHHHHHHHH-HHCCCEEEEECCCCCHhHH---Hhc---------C--CceEecC
Confidence 456899999999997 5678999998 6899999999998753211 011 0 1123468
Q ss_pred HHHHhhcCCEEEEcCCCCcccccccCHhHH-ccCCCCcEEEecCCCccCCHHHH
Q 019328 230 MDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGPVIDEVAL 282 (342)
Q Consensus 230 l~ell~~sDiV~l~lplt~~t~~li~~~~l-~~mk~gailIN~sRG~~vd~~aL 282 (342)
+++.++.+|.|+++++-. +-+. ++-+.+ +.|+ +.+++++ |+ +.|.+.+
T Consensus 382 ~~~~~~~ad~vvi~t~~~-~f~~-~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 382 PYAAADGADALVIVTEWD-AFRA-LDLTRIKNSLK-SPVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp HHHHHTTBSEEEECSCCT-TTTS-CCHHHHHTTBS-SCBEECS-SC-CSCHHHH
T ss_pred hhHHhcCCCEEEEeeCCH-Hhhc-CCHHHHHHhcC-CCEEEEC-CC-CCCHHHH
Confidence 899999999999998733 3333 454444 4465 4678884 54 3565544
No 256
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.48 E-value=0.0024 Score=56.58 Aligned_cols=68 Identities=15% Similarity=0.243 Sum_probs=42.8
Q ss_pred CEEEEEccChHHHHHHHH-HHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARM-MVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~-l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
++++|||.|++|+.+++. .....|+++. ++|.++..... ...+.......++++++++.|+++++
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~-------------~i~gv~V~~~~dl~eli~~~D~ViIA 152 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGT-------------EVGGVPVYNLDDLEQHVKDESVAILT 152 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTC-------------EETTEEEEEGGGHHHHCSSCCEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHh-------------HhcCCeeechhhHHHHHHhCCEEEEe
Confidence 369999999999999993 1235577765 56877653100 00112222356799999777999999
Q ss_pred CCC
Q 019328 244 PVL 246 (342)
Q Consensus 244 lpl 246 (342)
+|.
T Consensus 153 vPs 155 (215)
T 2vt3_A 153 VPA 155 (215)
T ss_dssp SCH
T ss_pred cCc
Confidence 993
No 257
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.48 E-value=0.0072 Score=56.97 Aligned_cols=67 Identities=15% Similarity=0.166 Sum_probs=47.3
Q ss_pred CEEEEEccChHHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc--CCEEE
Q 019328 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~-vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--sDiV~ 241 (342)
.+|||||+|.||+. .++.+.+.-++++. ++|+++..... .+ .+...+.+++++++. .|+|+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~----~~-----------~~~~~~~~~~~ll~~~~vD~V~ 72 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA----DW-----------PAIPVVSDPQMLFNDPSIDLIV 72 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT----TC-----------SSCCEESCHHHHHHCSSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh----hC-----------CCCceECCHHHHhcCCCCCEEE
Confidence 58999999999997 77776333378876 67887654211 00 112345799999976 89999
Q ss_pred EcCCCC
Q 019328 242 LHPVLD 247 (342)
Q Consensus 242 l~lplt 247 (342)
+|+|..
T Consensus 73 i~tp~~ 78 (352)
T 3kux_A 73 IPTPND 78 (352)
T ss_dssp ECSCTT
T ss_pred EeCChH
Confidence 999944
No 258
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.47 E-value=0.011 Score=54.74 Aligned_cols=126 Identities=17% Similarity=0.241 Sum_probs=71.7
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
.+|+|+|.|.+|..+|..|+ ..|. +|..||+.+........+ ....... -..+.......+ .+.++.||+|+++
T Consensus 1 MkI~ViGaG~vG~~la~~l~-~~~~~~~v~L~D~~~~~~~g~~~d-l~~~~~~-~~~~~~i~~t~d-~~a~~~aDiVVia 76 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCL-LNLDVDEIALVDIAEDLAVGEAMD-LAHAAAG-IDKYPKIVGGAD-YSLLKGSEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHSCCSEEEEECSSHHHHHHHHHH-HHHHHHT-TTCCCEEEEESC-GGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEECChHHHHHHHHH-HHhhhhh-cCCCCEEEEeCC-HHHhCCCCEEEEC
Confidence 37999999999999999874 3455 899999987542111010 0000000 001111222235 7889999999999
Q ss_pred CCCC--c-cccc-cc--CH-------hHHccCCCCcEEEecCCCccCCHHHHHHHH----HcCCccEEE--ee
Q 019328 244 PVLD--K-TTYH-LI--NK-------ERLATMKKEAILVNCSRGPVIDEVALVEHL----KQNPMFRVG--LD 297 (342)
Q Consensus 244 lplt--~-~t~~-li--~~-------~~l~~mk~gailIN~sRG~~vd~~aL~~aL----~~g~i~gaa--lD 297 (342)
.+.. | .||. ++ |. +.+....|++++++++ .++|.-..+-.- ...++.|.+ ||
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t~~~~k~~g~p~~rviG~gt~LD 147 (294)
T 1oju_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYIMWKESGKPRNEVFGMGNQLD 147 (294)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHHHHHHSCCCTTSEEECSHHHH
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHHHHHHHhcCCCHHHEeecccccH
Confidence 6532 2 1221 11 11 2455568999999998 455543322211 134677764 55
No 259
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.45 E-value=0.035 Score=52.80 Aligned_cols=107 Identities=16% Similarity=0.177 Sum_probs=69.1
Q ss_pred ccCCCEEEEEccC--hHHHHHHHHHHhcCCcEEEEEcCChhhH--HHHHHhhhhhhhccCCCCCccccccCCHHHHhhcC
Q 019328 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATR--LEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 162 ~l~gktvGIiG~G--~IG~~vA~~l~~a~g~~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~s 237 (342)
.+.|++|++||=| ++.++.+..+ ..||++|.+..|..-.. .+.+.+......+..+ .......++++.++.+
T Consensus 177 ~l~glkva~vGD~~nnva~Sl~~~~-~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g---~~i~~~~d~~eav~~a 252 (365)
T 4amu_A 177 NLKNKKIVFIGDYKNNVGVSTMIGA-AFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNG---GSLRFSTDKILAAQDA 252 (365)
T ss_dssp SCTTCEEEEESSTTSHHHHHHHHHH-HHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHS---CEEEEESCHHHHTTTC
T ss_pred CCCCCEEEEECCCCcchHHHHHHHH-HHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcC---CEEEEECCHHHHhcCC
Confidence 3889999999988 7889999886 58999999998853211 1111111100011111 1223457999999999
Q ss_pred CEEEEcC--CCCccc-----------ccccCHhHHccCCCCcEEEecC
Q 019328 238 DVISLHP--VLDKTT-----------YHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 238 DiV~l~l--plt~~t-----------~~li~~~~l~~mk~gailIN~s 272 (342)
|+|..-+ ..+.+. .--++.+.++.+||+++|.-+.
T Consensus 253 DVVytd~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 253 DVIYTDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp SEEEECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECS
T ss_pred CEEEecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 9999743 112111 1236888999999999888764
No 260
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.44 E-value=0.0058 Score=57.12 Aligned_cols=68 Identities=15% Similarity=0.186 Sum_probs=47.4
Q ss_pred CEEEEEccChHHH-HHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEEE
Q 019328 166 QTVGVIGAGRIGS-AYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~-~vA~~l~~a~g~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV~ 241 (342)
.+|||||+|.+|. .+++.+ +.-++++ .++|+++... +.+.+.++ +...+.+++++++ +.|+|+
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l-~~~~~~lvav~d~~~~~~-~~~a~~~~-----------~~~~~~~~~~ll~~~~~D~V~ 71 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQL-IDAGAELAGVFESDSDNR-AKFTSLFP-----------SVPFAASAEQLITDASIDLIA 71 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHH-HHTTCEEEEEECSCTTSC-HHHHHHST-----------TCCBCSCHHHHHTCTTCCEEE
T ss_pred cEEEEECCChHHHHHhhhhh-cCCCcEEEEEeCCCHHHH-HHHHHhcC-----------CCcccCCHHHHhhCCCCCEEE
Confidence 4899999999996 677776 4558886 5789886542 22222221 1123578999997 689999
Q ss_pred EcCCC
Q 019328 242 LHPVL 246 (342)
Q Consensus 242 l~lpl 246 (342)
+++|.
T Consensus 72 i~tp~ 76 (336)
T 2p2s_A 72 CAVIP 76 (336)
T ss_dssp ECSCG
T ss_pred EeCCh
Confidence 99993
No 261
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.42 E-value=0.006 Score=57.74 Aligned_cols=70 Identities=21% Similarity=0.299 Sum_probs=45.7
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcC--------CcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGF--------KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL 234 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~--------g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell 234 (342)
+--+|||||+|.||+.-++.+ +.+ +++|. ++|+++.. .+.+.+.|+. ...+.++++++
T Consensus 24 kkirvgiIG~G~ig~~H~~a~-~~~~~~~~~~~~~~lvav~d~~~~~-a~~~a~~~g~-----------~~~y~d~~ell 90 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAW-NAVKTVFGDVERPRLVHLAEANAGL-AEARAGEFGF-----------EKATADWRALI 90 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHH-TTHHHHHCSSCCCEEEEEECC--TT-HHHHHHHHTC-----------SEEESCHHHHH
T ss_pred CCccEEEEcCCHHHHHHHHHH-HhhhhhhccCCCcEEEEEECCCHHH-HHHHHHHhCC-----------CeecCCHHHHh
Confidence 335899999999999877664 332 46765 56887654 2333333321 12357999999
Q ss_pred h--cCCEEEEcCCC
Q 019328 235 R--EADVISLHPVL 246 (342)
Q Consensus 235 ~--~sDiV~l~lpl 246 (342)
+ +-|+|++++|.
T Consensus 91 ~~~~iDaV~IatP~ 104 (393)
T 4fb5_A 91 ADPEVDVVSVTTPN 104 (393)
T ss_dssp HCTTCCEEEECSCG
T ss_pred cCCCCcEEEECCCh
Confidence 6 46899999993
No 262
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.42 E-value=0.13 Score=48.64 Aligned_cols=107 Identities=17% Similarity=0.210 Sum_probs=69.5
Q ss_pred ccCCCEEEEEccC--hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 162 ~l~gktvGIiG~G--~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
.+.|.+|+++|=| ++.++++..+ ..||++|.+..|..-...+.+.+......+..+ .......++++.++.+|+
T Consensus 173 ~l~gl~va~vGD~~~rva~Sl~~~~-~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDv 248 (359)
T 2w37_A 173 KLQGLTLTFMGDGRNNVANSLLVTG-AILGVNIHIVAPKALFPTEETQNIAKGFAEKSG---AKLVITDDLDEGLKGSNV 248 (359)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-HHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSE
T ss_pred CcCCeEEEEECCCccchHHHHHHHH-HHcCCEEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEeCHHHHhcCCCE
Confidence 4789999999996 9999999987 579999999987532111111110000000111 112335799999999999
Q ss_pred EEEcCCC--Cc---c------cccccCHhHHccCC---CCcEEEecC
Q 019328 240 ISLHPVL--DK---T------TYHLINKERLATMK---KEAILVNCS 272 (342)
Q Consensus 240 V~l~lpl--t~---~------t~~li~~~~l~~mk---~gailIN~s 272 (342)
|..-.-. .. + ..--++.+.++.+| |+++|.-+.
T Consensus 249 vytd~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcL 295 (359)
T 2w37_A 249 VYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCL 295 (359)
T ss_dssp EEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECS
T ss_pred EEEcccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCC
Confidence 9885431 11 0 12346888999999 899998774
No 263
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.41 E-value=0.0031 Score=59.39 Aligned_cols=69 Identities=16% Similarity=0.226 Sum_probs=46.2
Q ss_pred CEEEEEccChHHHH-HHH-HHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc--CCEE
Q 019328 166 QTVGVIGAGRIGSA-YAR-MMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (342)
Q Consensus 166 ktvGIiG~G~IG~~-vA~-~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--sDiV 240 (342)
.++||||+|.||+. .++ .+...-++++. ++|+++... .. ...+ .+...+.+++++++. .|+|
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~-~~-~~~~-----------~~~~~~~~~~~ll~~~~~D~V 69 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPE-EQ-APIY-----------SHIHFTSDLDEVLNDPDVKLV 69 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGG-GG-SGGG-----------TTCEEESCTHHHHTCTTEEEE
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHH-HH-HHhc-----------CCCceECCHHHHhcCCCCCEE
Confidence 47999999999996 455 33233478877 788876542 11 0000 112345799999986 8999
Q ss_pred EEcCCCC
Q 019328 241 SLHPVLD 247 (342)
Q Consensus 241 ~l~lplt 247 (342)
++|+|..
T Consensus 70 ~i~tp~~ 76 (345)
T 3f4l_A 70 VVCTHAD 76 (345)
T ss_dssp EECSCGG
T ss_pred EEcCChH
Confidence 9999943
No 264
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.39 E-value=0.042 Score=53.18 Aligned_cols=118 Identities=19% Similarity=0.230 Sum_probs=72.8
Q ss_pred ccccCCCEEEEEccChHHHHHHHHHHhc-CCcEEE-EEcCC---------hhhHHHHHHhhhhhhhccCCCCCccccccC
Q 019328 160 GNLLKGQTVGVIGAGRIGSAYARMMVEG-FKMNLI-YYDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRAS 228 (342)
Q Consensus 160 g~~l~gktvGIiG~G~IG~~vA~~l~~a-~g~~V~-~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (342)
|.++.|++|.|.|+|++|+.+|+.| .. .|++|+ +.|.+ .......+.+..+ ...........
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L-~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g------~l~~y~~a~~~ 276 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLI-SQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHG------TVVTYPKGERI 276 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSS------CSTTCSSSEEE
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHH-HHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhC------CcccCCCceEc
Confidence 4579999999999999999999987 56 899998 44442 1111222221111 11010001122
Q ss_pred CHHHHh-hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 229 SMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 229 ~l~ell-~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
+.++++ ..||+++-|-. .+.|+.+....++ -.+++--+-+++- .++- +.|.+..+.
T Consensus 277 ~~~eil~~~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~t-~~a~-~~l~~~Gi~ 333 (415)
T 2tmg_A 277 TNEELLELDVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPTT-PEAD-EILSRRGIL 333 (415)
T ss_dssp CHHHHTTCSCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCBC-HHHH-HHHHHTTCE
T ss_pred CchhhhcCCCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCcccC-HHHH-HHHHHCCCE
Confidence 456665 47999998865 4557888888884 5577777888864 4433 445555443
No 265
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=96.38 E-value=0.032 Score=52.47 Aligned_cols=107 Identities=13% Similarity=0.188 Sum_probs=70.3
Q ss_pred ccCCCEEEEEccC--hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 162 ~l~gktvGIiG~G--~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
.+.|++|+++|=| ++.++.+..+ ..||++|....|..-...+.+.+......+..+ .......++++.++++|+
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDv 227 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIG-AKLGMDVRIAAPKALWPHDEFVAQCKKFAEESG---AKLTLTEDPKEAVKGVDF 227 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHH-HHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHT---CEEEEESCHHHHTTTCSE
T ss_pred CcCCeEEEEecCCccchHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CeEEEEeCHHHHhCCCCE
Confidence 5889999999996 9999999987 589999999988532111111110000000111 112335799999999999
Q ss_pred EEEcCCC--C------cc-----cccccCHhHHccC-CCCcEEEecC
Q 019328 240 ISLHPVL--D------KT-----TYHLINKERLATM-KKEAILVNCS 272 (342)
Q Consensus 240 V~l~lpl--t------~~-----t~~li~~~~l~~m-k~gailIN~s 272 (342)
|..-.-. . .+ ..--++.+.++.+ ||+++|.-+.
T Consensus 228 vytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 228 VHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCL 274 (335)
T ss_dssp EEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECS
T ss_pred EEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCC
Confidence 9885431 1 10 1234689999999 9999998773
No 266
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.37 E-value=0.0049 Score=58.49 Aligned_cols=94 Identities=14% Similarity=0.221 Sum_probs=63.5
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCC---HHHHhhcCCEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVLREADVI 240 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell~~sDiV 240 (342)
.|.+|.|+|.|.||..+++.+ +.+|++|++.+++..+.... ...++ .... ....+ +.++....|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~Vi~~~~~~~~~~~~-~~~lG-------a~~v--~~~~~~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFA-KAFGSKVTVISTSPSKKEEA-LKNFG-------ADSF--LVSRDQEQMQAAAGTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCGGGHHHH-HHTSC-------CSEE--EETTCHHHHHHTTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH-HHhcC-------CceE--EeccCHHHHHHhhCCCCEE
Confidence 688999999999999999985 79999999999876543211 11111 1100 01112 33344568999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
+.++..... -...++.|+++..+++++.
T Consensus 256 id~~g~~~~-----~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 256 IDTVSAVHP-----LLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp EECCSSCCC-----SHHHHHHEEEEEEEEECCC
T ss_pred EECCCcHHH-----HHHHHHHHhcCCEEEEEcc
Confidence 999874432 2467788899999998875
No 267
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.34 E-value=0.0059 Score=57.80 Aligned_cols=66 Identities=11% Similarity=0.208 Sum_probs=46.9
Q ss_pred CEEEEEccChHHHH-HHHHHHhcC-CcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEE
Q 019328 166 QTVGVIGAGRIGSA-YARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (342)
Q Consensus 166 ktvGIiG~G~IG~~-vA~~l~~a~-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV 240 (342)
.+|||||+|.||+. .++.+ +.. ++++. ++|+++.... ..++ +...+.+++++++ +.|+|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~~~----~~~~-----------~~~~~~~~~~ll~~~~vD~V 69 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLL-DVLDEYQISKIMTSRTEEVK----RDFP-----------DAEVVHELEEITNDPAIELV 69 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHH-TTCTTEEEEEEECSCHHHHH----HHCT-----------TSEEESSTHHHHTCTTCCEE
T ss_pred ceEEEEccCHHHHHHHHHHH-hhCCCeEEEEEEcCCHHHHH----hhCC-----------CCceECCHHHHhcCCCCCEE
Confidence 48999999999997 67776 444 78875 6788764311 1110 1234579999998 78999
Q ss_pred EEcCCCC
Q 019328 241 SLHPVLD 247 (342)
Q Consensus 241 ~l~lplt 247 (342)
++|+|..
T Consensus 70 ~i~tp~~ 76 (358)
T 3gdo_A 70 IVTTPSG 76 (358)
T ss_dssp EECSCTT
T ss_pred EEcCCcH
Confidence 9999954
No 268
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.34 E-value=0.015 Score=54.25 Aligned_cols=104 Identities=15% Similarity=0.211 Sum_probs=59.1
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
.+|+|+|.|.||..+|..++ ..|. +|..+|..+... +.............. ...... ..+..+.++.||+|+++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~-~~~~~~el~l~D~~~~k~-~g~a~DL~~~~~~~~-~~~~v~-~~~~~~a~~~aDvVii~ 76 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVA-RQDVAKEVVMVDIKDGMP-QGKALDMRESSPIHG-FDTRVT-GTNDYGPTEDSDVCIIT 76 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCSSEEEEECSSTTHH-HHHHHHHHHHHHHHT-CCCEEE-EESSSGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCchHHH-HHHHHHHhccccccC-CCcEEE-ECCCHHHhCCCCEEEEC
Confidence 37999999999999999874 3344 899999987542 111111100000000 000111 12446778999999999
Q ss_pred CCCC--c-ccc-ccc--CH-------hHHccCCCCcEEEecCC
Q 019328 244 PVLD--K-TTY-HLI--NK-------ERLATMKKEAILVNCSR 273 (342)
Q Consensus 244 lplt--~-~t~-~li--~~-------~~l~~mk~gailIN~sR 273 (342)
.+.. | .+| .++ |. +.+....|++++++++-
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 77 AGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp CCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred CCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 7632 1 122 111 11 24455678999999984
No 269
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=96.32 E-value=0.48 Score=44.77 Aligned_cols=201 Identities=12% Similarity=0.096 Sum_probs=109.6
Q ss_pred HHHHHHhCCCeEEEecCCCC----CCCHHHHHHHhcCCccEEEecCCcCccHHHHHHhhccCCceEEEcccccCccChhH
Q 019328 29 WINLLIEQDCRVEICTQKKT----ILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNA 104 (342)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~l~~k~i~~~g~G~d~id~~~ 104 (342)
+-....+.|..+......+. ..+-.+....+..-+|+++++... ...+.. .
T Consensus 59 FE~A~~~LGg~vi~l~~~~ssl~kgEsl~DTarvLs~y~D~IviR~~~---~~~~~~----------------------l 113 (355)
T 4a8p_A 59 FETAMEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVER---HHSIVD----------------------L 113 (355)
T ss_dssp HHHHHHHTTCEEEEECBTTBCBTTTBCHHHHHHHHTTTCSEEEEECSS---HHHHHH----------------------H
T ss_pred HHHHHHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEecCc---HHHHHH----------------------H
Confidence 33345567777765533221 124445555555457888777432 222222 2
Q ss_pred HHhCCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEcc-ChHHHHHHHH
Q 019328 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA-GRIGSAYARM 183 (342)
Q Consensus 105 a~~~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~-G~IG~~vA~~ 183 (342)
|+-.+|+|.|.-+....++ .+|+=++.+.+++ ..|..+.|++|++||= +++.++.+..
T Consensus 114 A~~~~vPVINag~~~~HPt--QaLaDl~TI~E~~-------------------~~G~~l~glkva~vGD~~rva~Sl~~~ 172 (355)
T 4a8p_A 114 ANCATIPVINGMSDYNHPT--QELGDLCTMVEHL-------------------PEGKKLEDCKVVFVGDATQVCFSLGLI 172 (355)
T ss_dssp HHHCSSCEEECCCSSCCHH--HHHHHHHHHHHTC-------------------CTTCCGGGCEEEEESCCCHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh-------------------hcCCCCCCCEEEEECCCchhHHHHHHH
Confidence 3445789999765332222 1222222222211 0022588999999996 6788888888
Q ss_pred HHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC----CCccc---------
Q 019328 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV----LDKTT--------- 250 (342)
Q Consensus 184 l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp----lt~~t--------- 250 (342)
+ ..||++|.+..|..-...+.+.+......+.. +.......+++ .++++|+|..-+- ...+.
T Consensus 173 ~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~---G~~v~~~~d~~-av~~aDVVytd~w~smgq~~~~~~er~~~~~ 247 (355)
T 4a8p_A 173 T-TKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVS---GGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFY 247 (355)
T ss_dssp H-HHTTCEEEEECCTTSSCCHHHHHHHHHHHHHH---SCEEEEECCGG-GGTTCSEEEECCSSEETTEECCHHHHHHHHT
T ss_pred H-HHcCCEEEEECCCccCCCHHHHHHHHHHHHHc---CCeEEEECCHH-HHcCCCEEEecccccCcchhhhhHHHHHHhc
Confidence 6 68999999988753111111111000000000 11123356889 9999999997431 10110
Q ss_pred -ccccCHhHHccCCCCcEEEecC---CCccCCHH
Q 019328 251 -YHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 251 -~~li~~~~l~~mk~gailIN~s---RG~~vd~~ 280 (342)
.--++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 248 ~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~e 281 (355)
T 4a8p_A 248 PKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDE 281 (355)
T ss_dssp TTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHH
T ss_pred cccccCHHHHHhcCCCcEEECCCCCCCCCeeCHH
Confidence 1336888888899999988775 66555443
No 270
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.28 E-value=0.0045 Score=60.84 Aligned_cols=42 Identities=17% Similarity=0.178 Sum_probs=37.0
Q ss_pred ccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhH
Q 019328 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATR 202 (342)
Q Consensus 160 g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~ 202 (342)
.-++.|++|.|||.|.+|...++.| ...|++|.++|+...+.
T Consensus 7 ~~~l~~~~vlVvGgG~va~~k~~~L-~~~ga~V~vi~~~~~~~ 48 (457)
T 1pjq_A 7 FCQLRDRDCLIVGGGDVAERKARLL-LEAGARLTVNALTFIPQ 48 (457)
T ss_dssp EECCBTCEEEEECCSHHHHHHHHHH-HHTTBEEEEEESSCCHH
T ss_pred EEECCCCEEEEECCCHHHHHHHHHH-HhCcCEEEEEcCCCCHH
Confidence 3578999999999999999999998 58999999999876543
No 271
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.27 E-value=0.086 Score=49.62 Aligned_cols=114 Identities=17% Similarity=0.149 Sum_probs=72.1
Q ss_pred ccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
.+.|+||++||= +++.++.+..+ ..||++|.+..|..-...+.+.+......+..+ .......++++.++++|+|
T Consensus 176 ~l~glkva~vGD~~nva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDVv 251 (340)
T 4ep1_A 176 TFKGIKLAYVGDGNNVCHSLLLAS-AKVGMHMTVATPVGYRPNEEIVKKALAIAKETG---AEIEILHNPELAVNEADFI 251 (340)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHC---CCEEEESCHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CeEEEECCHHHHhCCCCEE
Confidence 478999999996 57788888876 579999999887531111111110000000111 1123357899999999999
Q ss_pred EEcCCCCc------c-----cccccCHhHHccCCCCcEEEecC---CCccCCH
Q 019328 241 SLHPVLDK------T-----TYHLINKERLATMKKEAILVNCS---RGPVIDE 279 (342)
Q Consensus 241 ~l~lplt~------~-----t~~li~~~~l~~mk~gailIN~s---RG~~vd~ 279 (342)
..-.-... + ..--++.+.++.+||+++|.-+. ||.=|+.
T Consensus 252 yt~~w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~ 304 (340)
T 4ep1_A 252 YTDVWMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTG 304 (340)
T ss_dssp EECCC------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCBTTTBCH
T ss_pred EecCccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCCCCCCCceeCH
Confidence 87654221 0 01347899999999999999886 7755544
No 272
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.27 E-value=0.022 Score=53.20 Aligned_cols=125 Identities=19% Similarity=0.177 Sum_probs=68.5
Q ss_pred CCEEEEEccChHHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~-a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
..+|+|||.|.+|..+|..|+. ++.-+|..||...... +............. ....... .+..+.++.||+|+++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~-~g~~~dl~~~~~~~-~~~~~v~--~~~~~a~~~aDvVvi~ 81 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKV-RGDVMDLKHATPYS-PTTVRVK--AGEYSDCHDADLVVIC 81 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHH-HHHHHHHHHHGGGS-SSCCEEE--ECCGGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHh-hhhhhhHHhhhhhc-CCCeEEE--eCCHHHhCCCCEEEEC
Confidence 4689999999999999998753 2334899999876432 11111111000000 0111111 1346678999999999
Q ss_pred CCCCcccccc-----c--C-------HhHHccCCCCcEEEecCCCccCCHHHHHHH--HHcCCccEE
Q 019328 244 PVLDKTTYHL-----I--N-------KERLATMKKEAILVNCSRGPVIDEVALVEH--LKQNPMFRV 294 (342)
Q Consensus 244 lplt~~t~~l-----i--~-------~~~l~~mk~gailIN~sRG~~vd~~aL~~a--L~~g~i~ga 294 (342)
.+... ..+. + | .+.+....|++++|+++---=+-...+.+. +...++.|.
T Consensus 82 ag~~~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 82 AGAAQ-KPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp CCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCC-CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHhCCCHHHEEec
Confidence 86432 2211 0 1 123344479999999763222223333333 333466666
No 273
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.27 E-value=0.0093 Score=56.06 Aligned_cols=104 Identities=21% Similarity=0.262 Sum_probs=59.6
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
.++|+|||.|.||..+|..|+ ..|. +|..+|+..... +............ ....... ..+..+.++.||+|++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~-~~~~~~~l~l~D~~~~k~-~g~a~DL~~~~~~-~~~~v~i--~~~~~~a~~~aDvVvi 79 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALI-NQGITDELVVIDVNKEKA-MGDVMDLNHGKAF-APQPVKT--SYGTYEDCKDADIVCI 79 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSCHHHH-HHHHHHHHHTGGG-SSSCCEE--EEECGGGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCCceEEEEecchHHH-HHHHHHHHhcccc-ccCCeEE--EeCcHHHhCCCCEEEE
Confidence 568999999999999999874 4454 899999976532 1111001000000 0001111 1223457899999999
Q ss_pred cCCCC--c-cccc-cc--CH-------hHHccCCCCcEEEecCC
Q 019328 243 HPVLD--K-TTYH-LI--NK-------ERLATMKKEAILVNCSR 273 (342)
Q Consensus 243 ~lplt--~-~t~~-li--~~-------~~l~~mk~gailIN~sR 273 (342)
+.... | .+|. ++ |. +.+....|++++++++-
T Consensus 80 ~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 80 CAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred ecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 97532 2 1221 11 11 23444578999999984
No 274
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.26 E-value=0.0063 Score=57.04 Aligned_cols=62 Identities=13% Similarity=0.185 Sum_probs=45.6
Q ss_pred CCCEEEEEccChHHH-HHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc---CC
Q 019328 164 KGQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---AD 238 (342)
Q Consensus 164 ~gktvGIiG~G~IG~-~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---sD 238 (342)
+-.+|||||+|.||+ ..++.+++--+++|. ++|++.+. .+...+.+++++++. .|
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~--------------------~g~~~~~~~~~ll~~~~~vD 83 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV--------------------EGVNSYTTIEAMLDAEPSID 83 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC--------------------TTSEEESSHHHHHHHCTTCC
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh--------------------cCCCccCCHHHHHhCCCCCC
Confidence 346899999999998 688876433477865 56776432 112245799999976 89
Q ss_pred EEEEcCC
Q 019328 239 VISLHPV 245 (342)
Q Consensus 239 iV~l~lp 245 (342)
+|++++|
T Consensus 84 ~V~i~tp 90 (330)
T 4ew6_A 84 AVSLCMP 90 (330)
T ss_dssp EEEECSC
T ss_pred EEEEeCC
Confidence 9999999
No 275
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.25 E-value=0.0079 Score=57.52 Aligned_cols=68 Identities=19% Similarity=0.283 Sum_probs=48.7
Q ss_pred CEEEEEccC-hHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc--CCEEE
Q 019328 166 QTVGVIGAG-RIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (342)
Q Consensus 166 ktvGIiG~G-~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--sDiV~ 241 (342)
.+|||||+| .||+..++.+.+.-++++. ++|+++... +.+.+.++ ...+.+++++++. .|+|+
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~g------------~~~~~~~~ell~~~~vD~V~ 69 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVR-ERFGKEYG------------IPVFATLAEMMQHVQMDAVY 69 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHH-HHHHHHHT------------CCEESSHHHHHHHSCCSEEE
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHH-HHHHHHcC------------CCeECCHHHHHcCCCCCEEE
Confidence 479999999 9999999887433467766 678886542 22222221 1235799999975 99999
Q ss_pred EcCCC
Q 019328 242 LHPVL 246 (342)
Q Consensus 242 l~lpl 246 (342)
+++|.
T Consensus 70 i~tp~ 74 (387)
T 3moi_A 70 IASPH 74 (387)
T ss_dssp ECSCG
T ss_pred EcCCc
Confidence 99993
No 276
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.25 E-value=0.018 Score=52.61 Aligned_cols=118 Identities=19% Similarity=0.168 Sum_probs=74.7
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
.++.|+++.|+|.|..+++++-.| ...|+ +|..++|+..+. ++..+.++... .... .....+.++++|+
T Consensus 121 ~~~~~~~~lilGaGGaarai~~aL-~~~g~~~i~i~nRt~~ra-~~la~~~~~~~-----~~~~---~~~~~~~~~~~dl 190 (269)
T 3tum_A 121 FEPAGKRALVIGCGGVGSAIAYAL-AEAGIASITLCDPSTARM-GAVCELLGNGF-----PGLT---VSTQFSGLEDFDL 190 (269)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCHHHH-HHHHHHHHHHC-----TTCE---EESCCSCSTTCSE
T ss_pred CCcccCeEEEEecHHHHHHHHHHH-HHhCCCeEEEeCCCHHHH-HHHHHHHhccC-----Ccce---ehhhhhhhhcccc
Confidence 367899999999999999999987 46775 899999987642 22222221100 0000 1112233567999
Q ss_pred EEEcCCCCccc--ccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 240 ISLHPVLDKTT--YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 240 V~l~lplt~~t--~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
|+.+.|..-.. .--++...++.++++.++.++-=.+ ..+.=|.+|-+.|
T Consensus 191 iiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~vY~P-~~T~ll~~A~~~G 241 (269)
T 3tum_A 191 VANASPVGMGTRAELPLSAALLATLQPDTLVADVVTSP-EITPLLNRARQVG 241 (269)
T ss_dssp EEECSSTTCSTTCCCSSCHHHHHTCCTTSEEEECCCSS-SSCHHHHHHHHHT
T ss_pred cccCCccccCCCCCCCCChHHHhccCCCcEEEEEccCC-CCCHHHHHHHHCc
Confidence 99999865322 2235677788888888888875433 3455555555544
No 277
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.24 E-value=0.005 Score=58.00 Aligned_cols=105 Identities=8% Similarity=0.033 Sum_probs=61.4
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
..++|+|||.|.||..+|..++ ..|. +|..+|....... .............. ........+.++ +++||+|+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la-~~g~~~ev~L~Di~~~~~~-g~a~DL~~~~~~~~--~~~i~~t~d~~~-~~daDiVI 94 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVL-MKDLADEVALVDVMEDKLK-GEMMDLEHGSLFLH--TAKIVSGKDYSV-SAGSKLVV 94 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHH-HHCCCSEEEEECSCHHHHH-HHHHHHHHHGGGSC--CSEEEEESSSCS-CSSCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEECCHHHHH-HHHHHhhhhhhccc--CCeEEEcCCHHH-hCCCCEEE
Confidence 5789999999999999999874 4454 8999999765321 11111100000000 111112345655 89999999
Q ss_pred EcCCCC--c-ccc-ccc--CH-------hHHccCCCCcEEEecCC
Q 019328 242 LHPVLD--K-TTY-HLI--NK-------ERLATMKKEAILVNCSR 273 (342)
Q Consensus 242 l~lplt--~-~t~-~li--~~-------~~l~~mk~gailIN~sR 273 (342)
++.... | .|| .++ |. +.+....|++++++++-
T Consensus 95 itaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 95 ITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp ECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 985422 1 122 122 11 23444579999999984
No 278
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.24 E-value=0.0072 Score=58.18 Aligned_cols=69 Identities=25% Similarity=0.319 Sum_probs=47.2
Q ss_pred CEEEEEccChHHHHHHHHHHhc--------CCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-
Q 019328 166 QTVGVIGAGRIGSAYARMMVEG--------FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR- 235 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a--------~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~- 235 (342)
.+|||||+|.||+.-++.+++. -+++|. ++|+++.. .+.+.+.|+. ...+.+++++++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~-a~~~a~~~~~-----------~~~y~d~~~ll~~ 94 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAM-AERHAAKLGA-----------EKAYGDWRELVND 94 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHH-HHHHHHHHTC-----------SEEESSHHHHHHC
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHH-HHHHHHHcCC-----------CeEECCHHHHhcC
Confidence 3899999999999888776321 145666 56888754 3333333321 123579999996
Q ss_pred -cCCEEEEcCCC
Q 019328 236 -EADVISLHPVL 246 (342)
Q Consensus 236 -~sDiV~l~lpl 246 (342)
+.|+|++++|.
T Consensus 95 ~~vD~V~I~tp~ 106 (412)
T 4gqa_A 95 PQVDVVDITSPN 106 (412)
T ss_dssp TTCCEEEECSCG
T ss_pred CCCCEEEECCCc
Confidence 57999999993
No 279
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=96.22 E-value=0.0088 Score=57.52 Aligned_cols=93 Identities=16% Similarity=0.131 Sum_probs=67.6
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
-.++-|+|.|.+|+.+++.+ +.+|++|.++|+++... + .+-+..+|-++...
T Consensus 204 ~~rL~IfGAGhva~ala~~a-~~lg~~V~v~D~R~~~~--------------------------~-~~~fp~a~~~~~~~ 255 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQG-AFLGYRVTVCDARPVFA--------------------------T-TARFPTADEVVVDW 255 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHH-HHTTCEEEEEESCTTTS--------------------------C-TTTCSSSSEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEECCchhhc--------------------------c-cccCCCceEEEeCC
Confidence 45899999999999999985 79999999999875420 0 11134566555544
Q ss_pred CCCcccccccCHhHHcc------CCCCcEEEecCCCccCCHHHHHHHHHcCCccEEE
Q 019328 245 VLDKTTYHLINKERLAT------MKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVG 295 (342)
Q Consensus 245 plt~~t~~li~~~~l~~------mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaa 295 (342)
| .+.+.. +.+++++|=+.++.-.|...|..+|+++.....|
T Consensus 256 p----------~~~~~~~~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG 302 (386)
T 2we8_A 256 P----------HRYLAAQAEAGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIG 302 (386)
T ss_dssp H----------HHHHHHHHHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCCSEEE
T ss_pred h----------HHHHHhhccccCCCCCcEEEEEECChHhHHHHHHHHhcCCCCCEEE
Confidence 4 122222 6788899999999999999999999987344444
No 280
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.22 E-value=0.018 Score=53.79 Aligned_cols=107 Identities=21% Similarity=0.242 Sum_probs=60.3
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCCh-hhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
..++|+|||.|.+|..+|..++ ..|. +|..+|+.+ ....+.............. .........+ .+.+++||+|+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~-~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~-~~~~i~~t~d-~~a~~~aDvVI 83 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLA-QKELADVVLVDIPQLENPTKGKALDMLEASPVQG-FDANIIGTSD-YADTADSDVVV 83 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHT-CCCCEEEESC-GGGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeccchHHHHHHhhhhHHHhhhhcc-CCCEEEEcCC-HHHhCCCCEEE
Confidence 4679999999999999999874 5677 999999984 2222211111100000000 0001111123 35689999999
Q ss_pred EcCCC--Cc-ccc-ccc--C----H---hHHccCCCCcEEEecCC
Q 019328 242 LHPVL--DK-TTY-HLI--N----K---ERLATMKKEAILVNCSR 273 (342)
Q Consensus 242 l~lpl--t~-~t~-~li--~----~---~~l~~mk~gailIN~sR 273 (342)
++... .| .|| .++ | + +.+....|++++++++.
T Consensus 84 iaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 84 ITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 99642 22 122 122 1 1 22333468999999984
No 281
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.22 E-value=0.073 Score=49.50 Aligned_cols=108 Identities=14% Similarity=0.256 Sum_probs=70.3
Q ss_pred ccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
.+.|+||++||= +++.++.+..+ ..||++|....|..-...+.+ .. ...+.......++++.++++|+|
T Consensus 151 ~l~glkva~vGD~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~-------~~--~~~g~~v~~~~d~~eav~~aDvv 220 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLYTWIQAA-RILDFKLQLSTPPGYALDAKL-------VD--AESAPFYQVFDDPNEACKGADLV 220 (309)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCGGGCCCGGG-------SC--GGGGGGEEECSSHHHHTTTCSEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHH-HHcCCEEEEECCcccCCCHHH-------HH--HHcCCeEEEEcCHHHHhcCCCEE
Confidence 478999999996 57788888876 589999999887431100000 00 00112233457999999999999
Q ss_pred EEcC----CCC---cc-----cccccCHhHHccCCCCcEEEecC---CCccCCH
Q 019328 241 SLHP----VLD---KT-----TYHLINKERLATMKKEAILVNCS---RGPVIDE 279 (342)
Q Consensus 241 ~l~l----plt---~~-----t~~li~~~~l~~mk~gailIN~s---RG~~vd~ 279 (342)
..-. ... ++ ..--++.+.++.+||+++|.-+. ||.=|+.
T Consensus 221 yt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~ 274 (309)
T 4f2g_A 221 TTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSDALFMHCLPAHRGEEVTA 274 (309)
T ss_dssp EECCC------------CCSGGGGCBCHHHHTTSCTTCEEEECSSCCBTTTBCH
T ss_pred EecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCCCCCCCceecH
Confidence 8754 110 00 12346899999999999998775 5654443
No 282
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.21 E-value=0.0099 Score=55.57 Aligned_cols=122 Identities=18% Similarity=0.220 Sum_probs=65.7
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCC--CCccccccCCHHHHhhcCCEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGE--QPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ell~~sDiV 240 (342)
..+|+|||.|.+|..+|..++ ..|. +|..+|...+.. +...... .+... ...... ..+ .+.++.||+|
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~-~~~~~~ev~L~Di~~~~~-~g~~~dl----~~~~~~~~~~~i~-~~~-~~a~~~aDvV 78 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMA-LRQTANELVLIDVFKEKA-IGEAMDI----NHGLPFMGQMSLY-AGD-YSDVKDCDVI 78 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-HTTCSSEEEEECCC---C-CHHHHHH----TTSCCCTTCEEEC---C-GGGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCChHHH-HHHHHHH----HHhHHhcCCeEEE-ECC-HHHhCCCCEE
Confidence 358999999999999999874 4455 999999875431 1111111 11100 011111 123 5568999999
Q ss_pred EEcCCCCcccccc-------cC----H---hHHccCCCCcEEEecCCCccCCH--HHHHHH--HHcCCccEEE--ee
Q 019328 241 SLHPVLDKTTYHL-------IN----K---ERLATMKKEAILVNCSRGPVIDE--VALVEH--LKQNPMFRVG--LD 297 (342)
Q Consensus 241 ~l~lplt~~t~~l-------i~----~---~~l~~mk~gailIN~sRG~~vd~--~aL~~a--L~~g~i~gaa--lD 297 (342)
+++.+.. ...++ .| . +.+....|++++|+++- ++|. ..+.+. +...++.|.+ ||
T Consensus 79 ii~~g~p-~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN--Pv~~~~~~~~k~s~~p~~rviG~gt~Ld 152 (318)
T 1y6j_A 79 VVTAGAN-RKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSN--PVDIITYMIQKWSGLPVGKVIGSGTVLD 152 (318)
T ss_dssp EECCCC-------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSS--SHHHHHHHHHHHHTCCTTTEEECTTHHH
T ss_pred EEcCCCC-CCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecC--cHHHHHHHHHHHcCCCHHHEeccCCchH
Confidence 9998743 22221 01 1 12333368999999743 4443 333333 3344676763 56
No 283
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.20 E-value=0.01 Score=55.15 Aligned_cols=103 Identities=17% Similarity=0.265 Sum_probs=58.2
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
++|+|||.|.+|..+|..++ ..|. +|..+|.+.+.. +.............. .........+. +.++.||+|+++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la-~~g~~~v~L~Di~~~~~-~g~~~dl~~~~~~~~-~~~~i~~t~d~-~a~~~aD~Vi~a~ 78 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLA-AKELGDIVLLDIVEGVP-QGKALDLYEASPIEG-FDVRVTGTNNY-ADTANSDVIVVTS 78 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSSSSHH-HHHHHHHHTTHHHHT-CCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCCeEEEEeCCccHH-HHHHHhHHHhHhhcC-CCeEEEECCCH-HHHCCCCEEEEcC
Confidence 58999999999999999874 5564 899999876432 221111111000000 01111222466 6689999999997
Q ss_pred CCCcccccc-----c--C----H---hHHccCCCCcEEEecCC
Q 019328 245 VLDKTTYHL-----I--N----K---ERLATMKKEAILVNCSR 273 (342)
Q Consensus 245 plt~~t~~l-----i--~----~---~~l~~mk~gailIN~sR 273 (342)
+. |...++ + | . +.+....|++++++++-
T Consensus 79 g~-p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 120 (309)
T 1ur5_A 79 GA-PRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNN 120 (309)
T ss_dssp CC---------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCS
T ss_pred CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence 53 222221 0 1 1 22333458999999754
No 284
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.18 E-value=0.01 Score=55.94 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=25.4
Q ss_pred CEEEEEccChHHHHHHHHHHhc--CCcEEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEG--FKMNLIYYDL 197 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a--~g~~V~~~d~ 197 (342)
.+|||+|+|.||+.+.|.|... =.++|.+.+.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~ 34 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAIND 34 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEc
Confidence 4799999999999999987543 4588876644
No 285
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.17 E-value=0.0059 Score=57.84 Aligned_cols=66 Identities=17% Similarity=0.205 Sum_probs=46.4
Q ss_pred CEEEEEccChHHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc--CCEEE
Q 019328 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~~-vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--sDiV~ 241 (342)
.+|||||+|.||+. .++.+.+.-++++. ++|+++.... +.+ + +...+.+++++++. .|+|+
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~----~~~----------~-~~~~~~~~~~ll~~~~vD~V~ 70 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSK----ERY----------P-QASIVRSFKELTEDPEIDLIV 70 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGG----TTC----------T-TSEEESCSHHHHTCTTCCEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH----HhC----------C-CCceECCHHHHhcCCCCCEEE
Confidence 58999999999997 67766333378875 6788764311 111 0 12345799999987 89999
Q ss_pred EcCCC
Q 019328 242 LHPVL 246 (342)
Q Consensus 242 l~lpl 246 (342)
+|+|.
T Consensus 71 i~tp~ 75 (362)
T 3fhl_A 71 VNTPD 75 (362)
T ss_dssp ECSCG
T ss_pred EeCCh
Confidence 99993
No 286
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.15 E-value=0.02 Score=55.78 Aligned_cols=87 Identities=13% Similarity=0.202 Sum_probs=64.0
Q ss_pred ccCCCEEEEEccC----------hHHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCH
Q 019328 162 LLKGQTVGVIGAG----------RIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (342)
Q Consensus 162 ~l~gktvGIiG~G----------~IG~~vA~~l~~a~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (342)
.+.|++|+|+|+- .-...+++.| ... |++|.+|||..... ....++
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L-~~~~g~~V~~~DP~~~~~----------------------~~~~~~ 368 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELL-NQEPDIEVCAYDPHVELD----------------------FVEHDM 368 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHH-HHSTTCEEEEECSSCCCT----------------------TBCSTT
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHH-HhhcCCEEEEECCCcccc----------------------cccCCH
Confidence 4789999999984 2367889988 577 99999999976431 123578
Q ss_pred HHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 231 ~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
++.++.||.|+++.+- ++-+. ++.+.++.|+ +.+++++ |+-
T Consensus 369 ~~~~~~ad~vvi~t~~-~~f~~-~d~~~~~~~~-~~~i~D~-r~~ 409 (431)
T 3ojo_A 369 SHAVKDASLVLILSDH-SEFKN-LSDSHFDKMK-HKVIFDT-KNV 409 (431)
T ss_dssp HHHHTTCSEEEECSCC-GGGTS-CCGGGGTTCS-SCEEEES-SCC
T ss_pred HHHHhCCCEEEEecCC-HHHhc-cCHHHHHhCC-CCEEEEC-CCC
Confidence 8999999999999873 33333 3445557777 6788885 543
No 287
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.15 E-value=0.011 Score=55.63 Aligned_cols=81 Identities=21% Similarity=0.165 Sum_probs=46.3
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEE-EcCChhhHHHHHHhhhhhhhcc--CCCC----CccccccCCHHHHhhcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKA--NGEQ----PVTWKRASSMDEVLREAD 238 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~-~d~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~l~ell~~sD 238 (342)
.+|||+|+|.||+.+++.+...-++++.+ +|++++.. ..+...++..... .+.. ........+.++++.++|
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~-~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vD 81 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFE-AYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVD 81 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHH-HHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHH-HHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCC
Confidence 37999999999999999874333577654 56653321 1111111100000 0000 000012357889999999
Q ss_pred EEEEcCCCC
Q 019328 239 VISLHPVLD 247 (342)
Q Consensus 239 iV~l~lplt 247 (342)
+|+.|.|..
T Consensus 82 vV~~aTp~~ 90 (334)
T 2czc_A 82 IIVDATPGG 90 (334)
T ss_dssp EEEECCSTT
T ss_pred EEEECCCcc
Confidence 999999944
No 288
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.14 E-value=0.01 Score=57.84 Aligned_cols=73 Identities=11% Similarity=0.122 Sum_probs=48.1
Q ss_pred CEEEEEccChHHH-HHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEEE
Q 019328 166 QTVGVIGAGRIGS-AYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (342)
Q Consensus 166 ktvGIiG~G~IG~-~vA~~l~~a~g~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV~ 241 (342)
.+|||||+|.||+ .+++.+.+.-++++ .++|++.... +.+.+.++ ........+.+++++++ +.|+|+
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~-~~~a~~~g-------~~~~~~~~~~~~~~ll~~~~vD~V~ 155 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKA-KIVAAEYG-------VDPRKIYDYSNFDKIAKDPKIDAVY 155 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHH-HHHHHHTT-------CCGGGEECSSSGGGGGGCTTCCEEE
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHH-HHHHHHhC-------CCcccccccCCHHHHhcCCCCCEEE
Confidence 5899999999997 88888632236775 4789886542 22222221 11000113568999997 799999
Q ss_pred EcCCC
Q 019328 242 LHPVL 246 (342)
Q Consensus 242 l~lpl 246 (342)
+++|.
T Consensus 156 iatp~ 160 (433)
T 1h6d_A 156 IILPN 160 (433)
T ss_dssp ECSCG
T ss_pred EcCCc
Confidence 99993
No 289
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.11 E-value=0.032 Score=50.97 Aligned_cols=82 Identities=12% Similarity=0.128 Sum_probs=49.8
Q ss_pred ccCCCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
++.||++-|+| .|.||+.+++.| ...|++|+.++|+..+. ++..+.+... ..............+++++++++|+|
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L-~~~G~~V~i~~R~~~~~-~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~Dvl 192 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALL-AGEGAEVVLCGRKLDKA-QAAADSVNKR-FKVNVTAAETADDASRAEAVKGAHFV 192 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHH-HHTTCEEEEEESSHHHH-HHHHHHHHHH-HTCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHH-HHCcCEEEEEECCHHHH-HHHHHHHHhc-CCcEEEEecCCCHHHHHHHHHhCCEE
Confidence 56789999999 999999999998 47899999999986432 2221111100 00000000000112345667778888
Q ss_pred EEcCCC
Q 019328 241 SLHPVL 246 (342)
Q Consensus 241 ~l~lpl 246 (342)
+.+.+.
T Consensus 193 Vn~ag~ 198 (287)
T 1lu9_A 193 FTAGAI 198 (287)
T ss_dssp EECCCT
T ss_pred EECCCc
Confidence 888763
No 290
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.11 E-value=0.0058 Score=59.95 Aligned_cols=76 Identities=9% Similarity=0.128 Sum_probs=49.6
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc--cccccCCHHHHhhcCCEEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVIS 241 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~sDiV~ 241 (342)
.+++|+|+|.|.||+.+++.|+ ..|.+|.++||+..+. +.....++ ..... ......+++++++.+|+|+
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~-~~G~~V~v~~R~~~~a-~~la~~~~------~~~~~~~Dv~d~~~l~~~l~~~DvVI 73 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLT-DSGIKVTVACRTLESA-KKLSAGVQ------HSTPISLDVNDDAALDAEVAKHDLVI 73 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHH-TTTCEEEEEESSHHHH-HHTTTTCT------TEEEEECCTTCHHHHHHHHTTSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCcCEEEEEECCHHHH-HHHHHhcC------CceEEEeecCCHHHHHHHHcCCcEEE
Confidence 4789999999999999999984 6889999999986532 11111000 00000 0011124667888999999
Q ss_pred EcCCCC
Q 019328 242 LHPVLD 247 (342)
Q Consensus 242 l~lplt 247 (342)
.+.|..
T Consensus 74 n~a~~~ 79 (450)
T 1ff9_A 74 SLIPYT 79 (450)
T ss_dssp ECCC--
T ss_pred ECCccc
Confidence 999954
No 291
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.10 E-value=0.013 Score=51.31 Aligned_cols=77 Identities=13% Similarity=0.127 Sum_probs=50.8
Q ss_pred cccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCC-CCccccccCCHHHHhhcCC
Q 019328 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-QPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 161 ~~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ell~~sD 238 (342)
..+.|++|.|.|. |.||+.+++.|+ .-|.+|++.+|+...... ... .+. .........++.+.+..+|
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~-~~G~~V~~~~R~~~~~~~-~~~--------~~~~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELK-NKGHEPVAMVRNEEQGPE-LRE--------RGASDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSGGGHHH-HHH--------TTCSEEEECCTTSCCGGGGTTCS
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHH-hCCCeEEEEECChHHHHH-HHh--------CCCceEEEcccHHHHHHHHcCCC
Confidence 5799999999998 999999999984 679999999998764221 110 011 0000000156778889999
Q ss_pred EEEEcCCCC
Q 019328 239 VISLHPVLD 247 (342)
Q Consensus 239 iV~l~lplt 247 (342)
+|+.+....
T Consensus 87 ~vi~~ag~~ 95 (236)
T 3e8x_A 87 AVVFAAGSG 95 (236)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999887654
No 292
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.10 E-value=0.073 Score=49.75 Aligned_cols=107 Identities=17% Similarity=0.126 Sum_probs=67.4
Q ss_pred ccCCCEEEEEccC-hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGAG-RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~G-~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
.+.|++|++||=| ++.++.+..+ ..||++|.+..|..-...+...+......+..+ .......++++.++++|+|
T Consensus 152 ~l~gl~va~vGD~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G---~~~~~~~d~~eav~~aDvv 227 (321)
T 1oth_A 152 SLKGLTLSWIGDGNNILHSIMMSA-AKFGMHLQAATPKGYEPDASVTKLAEQYAKENG---TKLLLTNDPLEAAHGGNVL 227 (321)
T ss_dssp CCTTCEEEEESCSSHHHHHHHTTT-GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSEE
T ss_pred CcCCcEEEEECCchhhHHHHHHHH-HHcCCeEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEECHHHHhccCCEE
Confidence 4889999999985 4777777765 579999999987532101111110000000011 1223357899999999999
Q ss_pred EEcC----CCCccc--------ccccCHhHHccCCCCcEEEecC
Q 019328 241 SLHP----VLDKTT--------YHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 241 ~l~l----plt~~t--------~~li~~~~l~~mk~gailIN~s 272 (342)
..-+ ....+. .--++.+.++.+||+++|.-+.
T Consensus 228 y~d~w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~l 271 (321)
T 1oth_A 228 ITDTWISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCL 271 (321)
T ss_dssp EECCSSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECS
T ss_pred EEeccccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCC
Confidence 9843 211111 1346899999999999998875
No 293
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.08 E-value=0.012 Score=54.34 Aligned_cols=105 Identities=17% Similarity=0.122 Sum_probs=65.2
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEE
Q 019328 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (342)
Q Consensus 165 gktvGIiG~-G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV 240 (342)
.++|+|+|. |++|+.+++.+ +..|++++ ..+|..... .-.+...+.+++++.+ ..|++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l-~~~g~~~v~~VnP~~~g~-----------------~i~G~~vy~sl~el~~~~~~Dv~ 68 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQM-LTYGTKIVAGVTPGKGGM-----------------EVLGVPVYDTVKEAVAHHEVDAS 68 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTTC-----------------EETTEEEESSHHHHHHHSCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHH-HHcCCeEEEEECCCCCCc-----------------eECCEEeeCCHHHHhhcCCCCEE
Confidence 468999999 99999999987 56788843 566643100 0012334578999998 89999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCCCcc-CCHHHHHHHHHcCCc
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPM 291 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~-vd~~aL~~aL~~g~i 291 (342)
++++|- +.+...+ ++..+. +-. .+|..+.|=. -+++.|.++.++..+
T Consensus 69 Ii~vp~-~~~~~~~-~ea~~~-Gi~-~vVi~t~G~~~~~~~~l~~~a~~~gi 116 (288)
T 1oi7_A 69 IIFVPA-PAAADAA-LEAAHA-GIP-LIVLITEGIPTLDMVRAVEEIKALGS 116 (288)
T ss_dssp EECCCH-HHHHHHH-HHHHHT-TCS-EEEECCSCCCHHHHHHHHHHHHHHTC
T ss_pred EEecCH-HHHHHHH-HHHHHC-CCC-EEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 999992 2233332 222221 222 2444555522 345678888877655
No 294
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.07 E-value=0.015 Score=54.92 Aligned_cols=31 Identities=32% Similarity=0.487 Sum_probs=25.2
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d 196 (342)
.+|||+|+|+||+.++|.+...-+++|.+..
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~ 34 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAIN 34 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEec
Confidence 4899999999999999987544568877554
No 295
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.07 E-value=0.026 Score=55.30 Aligned_cols=98 Identities=14% Similarity=0.169 Sum_probs=66.5
Q ss_pred ccccCCCEEEEEccC----------hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCC
Q 019328 160 GNLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (342)
Q Consensus 160 g~~l~gktvGIiG~G----------~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (342)
+..+.|++|+|+|+- .=...+++.| ...|++|.+|||...+.... .|+. ......+
T Consensus 313 ~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L-~~~g~~v~~~DP~~~~~~~~---~~~~----------~~~~~~~ 378 (450)
T 3gg2_A 313 KGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKL-LEVGCRVRVYDPVAMKEAQK---RLGD----------KVEYTTD 378 (450)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSCHHHHHH---HHGG----------GSEECSS
T ss_pred cccCCCCEEEEEeeeeCCCCcccccChHHHHHHHH-HHCCCEEEEECCCCcHHHHH---hcCc----------cceecCC
Confidence 346899999999984 3467889987 68999999999997532111 1110 1123468
Q ss_pred HHHHhhcCCEEEEcCCCCcccccccCHhHH-ccCCCCcEEEecCCCc
Q 019328 230 MDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGP 275 (342)
Q Consensus 230 l~ell~~sDiV~l~lplt~~t~~li~~~~l-~~mk~gailIN~sRG~ 275 (342)
+++.++.+|.|+++++- ++-+. ++-+.+ +.|+ +.+++++ |+-
T Consensus 379 ~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~-~~~i~D~-r~~ 421 (450)
T 3gg2_A 379 MYDAVRGAEALFHVTEW-KEFRM-PDWSALSQAMA-ASLVIDG-RNV 421 (450)
T ss_dssp HHHHTTTCSCEEECSCC-GGGSS-CCHHHHHHHSS-SCEEEES-SCC
T ss_pred HHHHhcCCCEEEEccCC-HHHhh-cCHHHHHHhcC-CCEEEEC-CCC
Confidence 89999999999999873 33333 344444 4466 5688885 543
No 296
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.06 E-value=0.013 Score=56.23 Aligned_cols=73 Identities=12% Similarity=0.160 Sum_probs=49.7
Q ss_pred CCEEEEEccCh---HHHHHHHHHHhcCCcEEE--EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc---
Q 019328 165 GQTVGVIGAGR---IGSAYARMMVEGFKMNLI--YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--- 236 (342)
Q Consensus 165 gktvGIiG~G~---IG~~vA~~l~~a~g~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--- 236 (342)
-.+|||||+|. ||+..+..+...-++++. ++|+++... +.+.+.++ ... ...+.+++++++.
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a-~~~a~~~g-------~~~--~~~~~~~~~ll~~~~~ 81 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRG-SAFGEQLG-------VDS--ERCYADYLSMFEQEAR 81 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHH-HHHHHHTT-------CCG--GGBCSSHHHHHHHHTT
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHH-HHHHHHhC-------CCc--ceeeCCHHHHHhcccc
Confidence 36899999999 999998876433347776 479987642 22222222 110 1245799999975
Q ss_pred ----CCEEEEcCCCC
Q 019328 237 ----ADVISLHPVLD 247 (342)
Q Consensus 237 ----sDiV~l~lplt 247 (342)
.|+|++++|..
T Consensus 82 ~~~~vD~V~i~tp~~ 96 (398)
T 3dty_A 82 RADGIQAVSIATPNG 96 (398)
T ss_dssp CTTCCSEEEEESCGG
T ss_pred cCCCCCEEEECCCcH
Confidence 89999999943
No 297
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.05 E-value=0.0085 Score=56.43 Aligned_cols=68 Identities=16% Similarity=0.258 Sum_probs=45.5
Q ss_pred CEEEEEccChHHH-HHHHHHHhcC-CcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc--CCEE
Q 019328 166 QTVGVIGAGRIGS-AYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (342)
Q Consensus 166 ktvGIiG~G~IG~-~vA~~l~~a~-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--sDiV 240 (342)
.+|||||+|.||+ ..++.+ +.. +++|. ++|++.. +.+.+.++. .+...+.+++++++. .|+|
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~---~~~a~~~~~---------~~~~~~~~~~~ll~~~~~D~V 69 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYV-MIRETLEVKTIFDLHVN---EKAAAPFKE---------KGVNFTADLNELLTDPEIELI 69 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHH-TTCTTEEEEEEECTTCC---HHHHHHHHT---------TTCEEESCTHHHHSCTTCCEE
T ss_pred eEEEEEccCHHHHHHHHHHH-hhCCCeEEEEEECCCHH---HHHHHhhCC---------CCCeEECCHHHHhcCCCCCEE
Confidence 4799999999999 567765 444 78875 6787722 122222110 012345799999986 8999
Q ss_pred EEcCCC
Q 019328 241 SLHPVL 246 (342)
Q Consensus 241 ~l~lpl 246 (342)
++++|.
T Consensus 70 ~i~tp~ 75 (349)
T 3i23_A 70 TICTPA 75 (349)
T ss_dssp EECSCG
T ss_pred EEeCCc
Confidence 999994
No 298
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.05 E-value=0.015 Score=54.64 Aligned_cols=105 Identities=17% Similarity=0.289 Sum_probs=60.0
Q ss_pred cCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHH--HhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKF--VTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 163 l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
...++|+|||.|.+|..+|..|+ ..|. +|..||+.+....... ......+. . .+.......+. +.++.||+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~-~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~---~-~~~~v~~t~d~-~a~~~aDi 78 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAG-LKELGDVVLFDIAEGTPQGKGLDIAESSPVD---G-FDAKFTGANDY-AAIEGADV 78 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHHHHHHHHHHHHHHHH---T-CCCCEEEESSG-GGGTTCSE
T ss_pred CcCCEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeCCchhHHHHHHHHhchhhhc---C-CCCEEEEeCCH-HHHCCCCE
Confidence 34679999999999999999874 4455 9999999875421110 00000000 0 01111112344 78899999
Q ss_pred EEEcCCCC--cc-ccc-cc--CH-------hHHccCCCCcEEEecCC
Q 019328 240 ISLHPVLD--KT-TYH-LI--NK-------ERLATMKKEAILVNCSR 273 (342)
Q Consensus 240 V~l~lplt--~~-t~~-li--~~-------~~l~~mk~gailIN~sR 273 (342)
|+++.+.. +. |+. ++ |. +.+....|++++++++-
T Consensus 79 VIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 79 VIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp EEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 99996522 11 221 11 11 12333458999999985
No 299
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.04 E-value=0.023 Score=55.18 Aligned_cols=118 Identities=16% Similarity=0.212 Sum_probs=66.2
Q ss_pred ccccCCCEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCCh--------------hhHHHHHHhhhhhhhccCCCCCccc
Q 019328 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQ--------------ATRLEKFVTAYGQFLKANGEQPVTW 224 (342)
Q Consensus 160 g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (342)
|.++.|+||.|.|+|++|+.+|+.| ...|++|+ +.|.+. .....+..+..+.. .....
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L-~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i------~~~~~ 279 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNI-ERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTL------IGFPG 279 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHH-HHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCc------ccCCC
Confidence 3478999999999999999999997 68999998 445551 01122221111100 00000
Q ss_pred cccCCHHHHh-hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 225 KRASSMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 225 ~~~~~l~ell-~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
....+.++++ ..||+++-|.. .+.|+.+....++ ..+++-.+-|++- .++ .+.|.+..+.
T Consensus 280 a~~i~~~~~~~~~~DIliP~A~-----~n~i~~~~A~~l~-ak~VvEgAN~P~t-~ea-~~il~~~GI~ 340 (421)
T 2yfq_A 280 AERITDEEFWTKEYDIIVPAAL-----ENVITGERAKTIN-AKLVCEAANGPTT-PEG-DKVLTERGIN 340 (421)
T ss_dssp ---------------CEEECSC-----SSCSCHHHHTTCC-CSEEECCSSSCSC-HHH-HHHHHHHTCE
T ss_pred ceEeCccchhcCCccEEEEcCC-----cCcCCcccHHHcC-CeEEEeCCccccC-HHH-HHHHHHCCCE
Confidence 0111223333 46999988854 5568888888884 6688888888864 333 3445554443
No 300
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.04 E-value=0.017 Score=56.41 Aligned_cols=120 Identities=14% Similarity=0.129 Sum_probs=70.8
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEc--------CChh--hHHHHHHhh-------hhhhhccCCCCCcc
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYD--------LYQA--TRLEKFVTA-------YGQFLKANGEQPVT 223 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d--------~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~ 223 (342)
.++.||||.|=|+|++|..+|+.| ...|++|++.+ +.-- .......+. ...+....+
T Consensus 231 ~~l~Gk~vaVQG~GnVG~~aa~~L-~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g----- 304 (450)
T 4fcc_A 231 MGFEGMRVSVSGSGNVAQYAIEKA-MEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFG----- 304 (450)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHT-----
T ss_pred CCcCCCEEEEeCCChHHHHHHHHH-HhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCC-----
Confidence 479999999999999999999997 68999998754 2210 011111000 000000000
Q ss_pred ccccCCHHHH-hhcCCEEEEcCCCCcccccccCHhHHccCCCC--cEEEecCCCccCCHHHHHHHHHcCCccEE
Q 019328 224 WKRASSMDEV-LREADVISLHPVLDKTTYHLINKERLATMKKE--AILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 224 ~~~~~~l~el-l~~sDiV~l~lplt~~t~~li~~~~l~~mk~g--ailIN~sRG~~vd~~aL~~aL~~g~i~ga 294 (342)
... .+-+++ -..||+.+-| .+.+.|+.+...+++.+ .++++-+-+.+-.+ + .+.|.+..|.-+
T Consensus 305 ~~~-~~~~~i~~~~~DI~iPc-----Al~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~e-A-~~iL~~rGIl~~ 370 (450)
T 4fcc_A 305 LVY-LEGQQPWSVPVDIALPC-----ATQNELDVDAAHQLIANGVKAVAEGANMPTTIE-A-TELFQQAGVLFA 370 (450)
T ss_dssp CEE-EETCCGGGSCCSEEEEC-----SCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHH-H-HHHHHHTTCEEE
T ss_pred cEE-ecCcccccCCccEEeec-----cccccccHHHHHHHHhcCceEEecCCCCCCCHH-H-HHHHHHCCCEEE
Confidence 000 011111 2469998877 45677888888888754 57888888876433 3 355666655443
No 301
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.03 E-value=0.0083 Score=56.65 Aligned_cols=104 Identities=15% Similarity=0.229 Sum_probs=63.5
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChh------------------hHHHHHHhhhhhhhccCCCCC
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQP 221 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 221 (342)
..|++++|.|||.|.+|..+|+.|+ ..|. ++..+|+..- ...+...+..... .....
T Consensus 30 ~kL~~~~VlIvGaGGlGs~va~~La-~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~i---nP~v~ 105 (340)
T 3rui_A 30 DIIKNTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI---FPLMD 105 (340)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHH---CTTCE
T ss_pred HHHhCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHh---CCCCE
Confidence 4689999999999999999999985 6675 6888886430 0111111110000 00000
Q ss_pred cccc-------------------ccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecC
Q 019328 222 VTWK-------------------RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 222 ~~~~-------------------~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~s 272 (342)
.... ...+++++++++|+|+.++- +.+|+.+++..-.+. +..+|+.+
T Consensus 106 v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD-n~~tR~lin~~c~~~---~~plI~aa 171 (340)
T 3rui_A 106 ATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 171 (340)
T ss_dssp EEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS-STGGGHHHHHHHHHT---TCEEEEEE
T ss_pred EEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC-CHHHHHHHHHHHHHc---CCcEEEee
Confidence 0000 01235678999999999986 567898887766543 44566643
No 302
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.02 E-value=0.0058 Score=53.86 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=44.9
Q ss_pred CEEEEEccChHHHHHHHHH-HhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-cCCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMM-VEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l-~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~sDiV~l 242 (342)
++++|+|.|.+|+.+++.+ ... |+++. ++|.++..... ...+.......+++++++ +.|+|++
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~-------------~i~gv~V~~~~dl~ell~~~ID~ViI 146 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGR-------------PVRGGVIEHVDLLPQRVPGRIEIALL 146 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTC-------------EETTEEEEEGGGHHHHSTTTCCEEEE
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhh-------------hhcCCeeecHHhHHHHHHcCCCEEEE
Confidence 5799999999999999852 134 88866 55776543100 001112223567889886 5899999
Q ss_pred cCCC
Q 019328 243 HPVL 246 (342)
Q Consensus 243 ~lpl 246 (342)
|+|.
T Consensus 147 A~Ps 150 (211)
T 2dt5_A 147 TVPR 150 (211)
T ss_dssp CSCH
T ss_pred eCCc
Confidence 9993
No 303
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.99 E-value=0.031 Score=51.03 Aligned_cols=40 Identities=25% Similarity=0.244 Sum_probs=34.7
Q ss_pred cccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhh
Q 019328 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (342)
Q Consensus 161 ~~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~ 201 (342)
.++.||++-|.|- |.||+.+|++|+ ..|++|+..+++...
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~ 83 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFA-KEGANIAIAYLDEEG 83 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchH
Confidence 4689999999997 889999999984 779999999987653
No 304
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=95.98 E-value=0.0087 Score=59.08 Aligned_cols=128 Identities=14% Similarity=0.240 Sum_probs=72.0
Q ss_pred CCEEEEEccChH-HHHHHHHHHh---cC-CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 165 GQTVGVIGAGRI-GSAYARMMVE---GF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 165 gktvGIiG~G~I-G~~vA~~l~~---a~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
..+|+|||.|.. |..+|..|++ ++ +-+|..||+...... ...+.....+.. ...+.......++++.++.||+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~-~~~~~~~~~l~~-~~~~~~I~~t~D~~eal~~AD~ 105 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQD-RIAGACDVFIRE-KAPDIEFAATTDPEEAFTDVDF 105 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHH-HHHHHHHHHHHH-HCTTSEEEEESCHHHHHSSCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHH-HHHHHHHHHhcc-CCCCCEEEEECCHHHHHcCCCE
Confidence 469999999998 6667655443 45 668999999875421 111100001011 0112222334688899999999
Q ss_pred EEEcCCCCcc---cc--------ccc--------------------C--HhHHccCCCCcEEEecCCCccCCHHHHHHHH
Q 019328 240 ISLHPVLDKT---TY--------HLI--------------------N--KERLATMKKEAILVNCSRGPVIDEVALVEHL 286 (342)
Q Consensus 240 V~l~lplt~~---t~--------~li--------------------~--~~~l~~mk~gailIN~sRG~~vd~~aL~~aL 286 (342)
|++++|.... ++ +++ - .+.+....|++++||++---=+-+.++.+..
T Consensus 106 VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~ 185 (472)
T 1u8x_X 106 VMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLR 185 (472)
T ss_dssp EEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHS
T ss_pred EEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhC
Confidence 9999985210 11 111 0 1234445689999999875533334444433
Q ss_pred HcCCccEE
Q 019328 287 KQNPMFRV 294 (342)
Q Consensus 287 ~~g~i~ga 294 (342)
...++.|.
T Consensus 186 p~~rViG~ 193 (472)
T 1u8x_X 186 PNSKILNI 193 (472)
T ss_dssp TTCCEEEC
T ss_pred CCCCEEEe
Confidence 23355555
No 305
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.98 E-value=0.0068 Score=54.72 Aligned_cols=103 Identities=20% Similarity=0.222 Sum_probs=63.3
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChh------------------hHHHHHHhhhhhhhccCCCCC
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQP 221 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 221 (342)
..|.+++|.|+|.|.+|..+|+.|+ ..|. ++..+|+..- .+.+...+.+... .....
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La-~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~---np~~~ 99 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLA-GAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQL---NPDIQ 99 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHH-HTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHH---CTTSE
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHH-HcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHH---CCCCE
Confidence 4689999999999999999999985 6676 7888876531 0111111111000 00000
Q ss_pred cccc----ccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEec
Q 019328 222 VTWK----RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (342)
Q Consensus 222 ~~~~----~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~ 271 (342)
+... ...+++++++++|+|+.+.+ +.+++.++++...+. +.-+|..
T Consensus 100 v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~ 149 (251)
T 1zud_1 100 LTALQQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITA 149 (251)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEE
T ss_pred EEEEeccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEE
Confidence 0000 01246678899999999987 677888888776653 3335554
No 306
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.97 E-value=0.014 Score=53.52 Aligned_cols=97 Identities=21% Similarity=0.288 Sum_probs=57.8
Q ss_pred CEEEEEc-cChHHHHHHHHHHhcCCcEEEE-EcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG-~G~IG~~vA~~l~~a~g~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
.+|+|+| +|+||+.+++.+...-++++.+ +|++...... ...++.. +... +.....+++++++++|+|+-+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G---~d~gel~---g~~~-gv~v~~dl~~ll~~~DVVIDf 80 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLG---QDAGAFL---GKQT-GVALTDDIERVCAEADYLIDF 80 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTT---SBTTTTT---TCCC-SCBCBCCHHHHHHHCSEEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccccc---ccHHHHh---CCCC-CceecCCHHHHhcCCCEEEEc
Confidence 5899999 9999999999875566888776 6876432100 0000000 1011 233457999999999999988
Q ss_pred CCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 244 lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
.+ |+... +-....++.|.-+|-...|
T Consensus 81 T~--p~a~~---~~~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 81 TL--PEGTL---VHLDAALRHDVKLVIGTTG 106 (272)
T ss_dssp SC--HHHHH---HHHHHHHHHTCEEEECCCC
T ss_pred CC--HHHHH---HHHHHHHHcCCCEEEECCC
Confidence 76 43211 1111223445556655556
No 307
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.97 E-value=0.037 Score=51.77 Aligned_cols=126 Identities=16% Similarity=0.237 Sum_probs=67.8
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
..++|+|||.|.+|..+|..|+ .-|. +|..+|..+.... .............. .........+ .+.++.||+|++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~-~~~~~~v~l~Di~~~~~~-g~a~dL~~~~~~~~-~~~~v~~t~d-~~a~~~aDvVIi 79 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLAL-IKQLGDVVLFDIAQGMPN-GKALDLLQTCPIEG-VDFKVRGTND-YKDLENSDVVIV 79 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHHH-HHHHHHHTTHHHHT-CCCCEEEESC-GGGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCceEEEEeCChHHHH-HHHHHHHhhhhhcC-CCcEEEEcCC-HHHHCCCCEEEE
Confidence 3578999999999999999874 3344 9999999875421 11111100000000 0111111223 468899999999
Q ss_pred cCCCC--c-cccc-cc--CH-------hHHccCCCCcEEEecCCCccCCHH--HHHHH--HHcCCccEEE
Q 019328 243 HPVLD--K-TTYH-LI--NK-------ERLATMKKEAILVNCSRGPVIDEV--ALVEH--LKQNPMFRVG 295 (342)
Q Consensus 243 ~lplt--~-~t~~-li--~~-------~~l~~mk~gailIN~sRG~~vd~~--aL~~a--L~~g~i~gaa 295 (342)
+.+.. | .|+. ++ |. +.+....|++++++++ .++|.- .+.+. +...++.|.+
T Consensus 80 ~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~t~~~~k~sg~p~~rviG~~ 147 (321)
T 3p7m_A 80 TAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLDIMVNMLQKFSGVPDNKIVGMA 147 (321)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHHHHHHHHHHCCCGGGEEEEC
T ss_pred cCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchHHHHHHHHHhcCCCHHHEEeec
Confidence 96422 2 1221 11 11 2233345899999995 444443 23232 2224566665
No 308
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.94 E-value=0.0067 Score=56.42 Aligned_cols=99 Identities=15% Similarity=0.229 Sum_probs=55.9
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
.++|+|||.|.+|..+|..++ .-|. +|..+|.... ....-.+ ... . ..... ....++ +.++.||+|++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~-~~g~~~ev~L~Di~~~-~~g~a~d-l~~-~---~~~~i--~~t~d~-~~l~~aD~Vi~ 83 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAIS-AKGIADRLVLLDLSEG-TKGATMD-LEI-F---NLPNV--EISKDL-SASAHSKVVIF 83 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECCC------CHHH-HHH-H---TCTTE--EEESCG-GGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hcCCCCEEEEEcCCcc-hHHHHHH-Hhh-h---cCCCe--EEeCCH-HHHCCCCEEEE
Confidence 378999999999999998875 3345 9999999864 1111001 100 0 00111 122566 66899999999
Q ss_pred cCCCCc--cccccc---C----Hh---HHccCCCCcEEEecCC
Q 019328 243 HPVLDK--TTYHLI---N----KE---RLATMKKEAILVNCSR 273 (342)
Q Consensus 243 ~lplt~--~t~~li---~----~~---~l~~mk~gailIN~sR 273 (342)
+..... +|+.-+ | .+ .+....|++++++++-
T Consensus 84 aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 84 TVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp CCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 973211 111100 0 11 2223348999999877
No 309
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.91 E-value=0.022 Score=53.22 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=66.5
Q ss_pred CEEEEEccChHHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~-a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
.+|+|||.|.+|..++..++. ...-++..+|...+.. +........... -..+.... .+..+.++.||+|+++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~-~g~~~dl~~~~~--~~~~~~v~--~~~~~a~~~aDvVii~a 80 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT-KGDALDLEDAQA--FTAPKKIY--SGEYSDCKDADLVVITA 80 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH-HHHHHHHHGGGG--GSCCCEEE--ECCGGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHH-HHHHHHHHHHHH--hcCCeEEE--ECCHHHhCCCCEEEECC
Confidence 689999999999999988753 3333899999976432 211111111000 00111111 23456789999999997
Q ss_pred CCCcccccc-----c--CH-------hHHccCCCCcEEEecCCCccCCHHHHHHH--HHcCCccEE
Q 019328 245 VLDKTTYHL-----I--NK-------ERLATMKKEAILVNCSRGPVIDEVALVEH--LKQNPMFRV 294 (342)
Q Consensus 245 plt~~t~~l-----i--~~-------~~l~~mk~gailIN~sRG~~vd~~aL~~a--L~~g~i~ga 294 (342)
+... ..++ + |. +.+....|++++++++---=+-...+.+. +...++.|.
T Consensus 81 g~~~-~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 145 (318)
T 1ez4_A 81 GAPQ-KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGS 145 (318)
T ss_dssp CC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEec
Confidence 6432 2211 1 11 23344479999999843222223333333 333466666
No 310
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.90 E-value=0.019 Score=53.95 Aligned_cols=124 Identities=18% Similarity=0.165 Sum_probs=66.4
Q ss_pred CCEEEEEccChHHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~-a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
..+|+|||.|.+|..++..++. ...-++..+|...... +........... ...+.... .+..+.++.||+|+++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~-~g~~~dl~~~~~--~~~~~~i~--~~~~~a~~~aDvVii~ 83 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKT-KGDAIDLSNALP--FTSPKKIY--SAEYSDAKDADLVVIT 83 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHH-HHHHHHHHTTGG--GSCCCEEE--ECCGGGGGGCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHh-HHHHHHHHHHHH--hcCCeEEE--ECCHHHhCCCCEEEEc
Confidence 4689999999999999988742 3334899999976432 121111110000 00111111 2346678999999999
Q ss_pred CCCCcccccc-------cCH-------hHHccCCCCcEEEecCCCccCCHHHHHHH--HHcCCccEE
Q 019328 244 PVLDKTTYHL-------INK-------ERLATMKKEAILVNCSRGPVIDEVALVEH--LKQNPMFRV 294 (342)
Q Consensus 244 lplt~~t~~l-------i~~-------~~l~~mk~gailIN~sRG~~vd~~aL~~a--L~~g~i~ga 294 (342)
.+... ..++ .|. +.+....|++++++++---=+-...+.+. +...++.|.
T Consensus 84 ag~~~-k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 149 (326)
T 2zqz_A 84 AGAPQ-KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGS 149 (326)
T ss_dssp CCCC------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEEc
Confidence 76432 2221 111 22333368999999843222223333333 333366666
No 311
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=95.90 E-value=0.023 Score=52.87 Aligned_cols=103 Identities=17% Similarity=0.276 Sum_probs=68.4
Q ss_pred ccCCCEEEEEcc---ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCC
Q 019328 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 162 ~l~gktvGIiG~---G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sD 238 (342)
.+.|++|++||= |++.++.+..+ ..||++|.+..|..-...+...+. .+..+ .......++++.++++|
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~----~~~~g---~~~~~~~d~~eav~~aD 223 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEAL-TFYDVELYLISPELLRMPRHIVEE----LREKG---MKVVETTTLEDVIGKLD 223 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHG-GGSCEEEEEECCGGGCCCHHHHHH----HHHTT---CCEEEESCTHHHHTTCS
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHH-HHCCCEEEEECCccccCCHHHHHH----HHHcC---CeEEEEcCHHHHhcCCC
Confidence 478999999998 48999999986 689999999988532111111110 11111 12233478999999999
Q ss_pred EEEEcCCCCc------cc-----ccccCHhHHccCCCCcEEEecC
Q 019328 239 VISLHPVLDK------TT-----YHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 239 iV~l~lplt~------~t-----~~li~~~~l~~mk~gailIN~s 272 (342)
+|..-.-..+ +- .--++.+.++.+||+++|.-+.
T Consensus 224 vvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 224 VLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp EEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred EEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 9988653221 11 1235778888888888887764
No 312
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.90 E-value=0.021 Score=55.15 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=48.1
Q ss_pred CEEEEEccCh---HHHHHHHHHHhcCCcEEE--EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc----
Q 019328 166 QTVGVIGAGR---IGSAYARMMVEGFKMNLI--YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---- 236 (342)
Q Consensus 166 ktvGIiG~G~---IG~~vA~~l~~a~g~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---- 236 (342)
.+|||||+|. ||+..+..+...-++++. ++|+++... +.+.+.++ ... ...+.+++++++.
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a-~~~a~~~g-------~~~--~~~~~~~~~ll~~~~~~ 107 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKA-EASGRELG-------LDP--SRVYSDFKEMAIREAKL 107 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHH-HHHHHHHT-------CCG--GGBCSCHHHHHHHHHHC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHH-HHHHHHcC-------CCc--ccccCCHHHHHhccccc
Confidence 5899999999 999988876333347765 579887542 33333332 110 1245799999986
Q ss_pred ---CCEEEEcCCCC
Q 019328 237 ---ADVISLHPVLD 247 (342)
Q Consensus 237 ---sDiV~l~lplt 247 (342)
.|+|+++.|..
T Consensus 108 ~~~vD~V~I~tp~~ 121 (417)
T 3v5n_A 108 KNGIEAVAIVTPNH 121 (417)
T ss_dssp TTCCSEEEECSCTT
T ss_pred CCCCcEEEECCCcH
Confidence 89999999943
No 313
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.88 E-value=0.021 Score=53.50 Aligned_cols=68 Identities=16% Similarity=0.256 Sum_probs=48.5
Q ss_pred CEEEEEccC-hHHHHHHHHHHhcC--CcEE-EEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCE
Q 019328 166 QTVGVIGAG-RIGSAYARMMVEGF--KMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (342)
Q Consensus 166 ktvGIiG~G-~IG~~vA~~l~~a~--g~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDi 239 (342)
.++||||+| .+|+..++.+ +.. ++++ .++|+++... +.+.+.++ . ...+.+++++++ +.|+
T Consensus 19 irvgiIG~G~~~g~~~~~~l-~~~~~~~~lvav~d~~~~~~-~~~a~~~~-------~----~~~~~~~~~ll~~~~vD~ 85 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPAL-KNLSHLFEITAVTSRTRSHA-EEFAKMVG-------N----PAVFDSYEELLESGLVDA 85 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHH-HTTTTTEEEEEEECSSHHHH-HHHHHHHS-------S----CEEESCHHHHHHSSCCSE
T ss_pred eeEEEEecCHHHHHHHHHHH-HhCCCceEEEEEEcCCHHHH-HHHHHHhC-------C----CcccCCHHHHhcCCCCCE
Confidence 489999999 8999999987 454 5776 4788887542 33333332 0 123579999996 5899
Q ss_pred EEEcCCC
Q 019328 240 ISLHPVL 246 (342)
Q Consensus 240 V~l~lpl 246 (342)
|++++|.
T Consensus 86 V~i~tp~ 92 (340)
T 1zh8_A 86 VDLTLPV 92 (340)
T ss_dssp EEECCCG
T ss_pred EEEeCCc
Confidence 9999993
No 314
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=95.88 E-value=0.71 Score=43.69 Aligned_cols=112 Identities=11% Similarity=0.138 Sum_probs=69.7
Q ss_pred cCCCE--EEEEcc---C--hHHHHHHHHHHhcCCcEEEEEcCC-hhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh
Q 019328 163 LKGQT--VGVIGA---G--RIGSAYARMMVEGFKMNLIYYDLY-QATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL 234 (342)
Q Consensus 163 l~gkt--vGIiG~---G--~IG~~vA~~l~~a~g~~V~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell 234 (342)
+.|++ |+++|= | ++.++.+..+ ..||++|.+..|. .-...+.+.+......+.. +.......++++++
T Consensus 188 l~glkvvva~vGDl~~~~nrva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~---g~~v~~~~d~~eav 263 (359)
T 1zq6_A 188 LRGKKYVLTWTYHPKPLNTAVANSALTIA-TRMGMDVTLLCPTPDYILDERYMDWAAQNVAES---GGSLQVSHDIDSAY 263 (359)
T ss_dssp CTTCEEEEEECCCSSCCCSHHHHHHHHHH-HHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHH---SCEEEEECCHHHHH
T ss_pred ccCCeeEEEEEecccccccchHHHHHHHH-HHcCCEEEEEcCccccCCCHHHHHHHHHHHHHc---CCeEEEECCHHHHh
Confidence 88999 999997 4 8999999987 6899999999886 2111111111000000010 11223457899999
Q ss_pred hcCCEEEEcCCCC-----cc----------cccccCHhHHccCCCCcEEEecC---CCccCCH
Q 019328 235 READVISLHPVLD-----KT----------TYHLINKERLATMKKEAILVNCS---RGPVIDE 279 (342)
Q Consensus 235 ~~sDiV~l~lplt-----~~----------t~~li~~~~l~~mk~gailIN~s---RG~~vd~ 279 (342)
+++|+|..-.-.. .+ ..-.++.+.++.+| +++|.-+. ||.=|+.
T Consensus 264 ~~aDvVyt~~w~se~~mg~~~~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~ 325 (359)
T 1zq6_A 264 AGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHCLPLRRNVKATD 325 (359)
T ss_dssp TTCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECCSCCCBTTTBCH
T ss_pred cCCCEEEECCccccccCCcchhhHHHHHHhcCCCCCHHHHHhCC-CCEEECCCCCCCCceeCH
Confidence 9999998765322 10 01235788888888 88887664 5554443
No 315
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.87 E-value=0.01 Score=56.01 Aligned_cols=69 Identities=12% Similarity=0.120 Sum_probs=45.8
Q ss_pred CEEEEEccChHHHHHHHHHHh--c-----CCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc-
Q 019328 166 QTVGVIGAGRIGSAYARMMVE--G-----FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE- 236 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~--a-----~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~- 236 (342)
-+|||||+|.||+.-++.+++ . .+++|. ++|+++... +.+.+.++. ...+.+++++++.
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a-~~~a~~~g~-----------~~~~~d~~~ll~~~ 74 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAV-RAAAGKLGW-----------STTETDWRTLLERD 74 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHH-HHHHHHHTC-----------SEEESCHHHHTTCT
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHH-HHHHHHcCC-----------CcccCCHHHHhcCC
Confidence 489999999999987776521 1 134554 678887542 333333321 1235789999964
Q ss_pred -CCEEEEcCCC
Q 019328 237 -ADVISLHPVL 246 (342)
Q Consensus 237 -sDiV~l~lpl 246 (342)
.|+|++++|.
T Consensus 75 ~iDaV~I~tP~ 85 (390)
T 4h3v_A 75 DVQLVDVCTPG 85 (390)
T ss_dssp TCSEEEECSCG
T ss_pred CCCEEEEeCCh
Confidence 7899999993
No 316
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=95.87 E-value=0.023 Score=55.71 Aligned_cols=128 Identities=13% Similarity=0.141 Sum_probs=72.7
Q ss_pred CCEEEEEccChH-HHHHHHHHHh---cC-CcEEEEEcCCh--hhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcC
Q 019328 165 GQTVGVIGAGRI-GSAYARMMVE---GF-KMNLIYYDLYQ--ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 165 gktvGIiG~G~I-G~~vA~~l~~---a~-g~~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~s 237 (342)
..+|+|||.|.. |..++..|++ .+ +-+|..||+.. ... +...+.....+.. ...+.......++.+.++.|
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~-~~~~~~~~~~~~~-~~~~~~i~~t~D~~eal~gA 84 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKL-EIVGALAKRMVEK-AGVPIEIHLTLDRRRALDGA 84 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHH-HHHHHHHHHHHHH-TTCCCEEEEESCHHHHHTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHH-HHHHHHHHHHHhh-cCCCcEEEEeCCHHHHhCCC
Confidence 358999999999 8887665543 45 56899999987 432 1111100001111 11122233346888899999
Q ss_pred CEEEEcCCCCcc---cc--------ccc--------------------C--HhHHccCCCCcEEEecCCCccCCHHHHHH
Q 019328 238 DVISLHPVLDKT---TY--------HLI--------------------N--KERLATMKKEAILVNCSRGPVIDEVALVE 284 (342)
Q Consensus 238 DiV~l~lplt~~---t~--------~li--------------------~--~~~l~~mk~gailIN~sRG~~vd~~aL~~ 284 (342)
|+|+++.|.... ++ +++ - .+.+....|++++||++---=+-+.++.+
T Consensus 85 D~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k 164 (450)
T 1s6y_A 85 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLR 164 (450)
T ss_dssp SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHH
T ss_pred CEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH
Confidence 999999994321 11 111 0 12344456899999998765444444444
Q ss_pred HHHcCCccEE
Q 019328 285 HLKQNPMFRV 294 (342)
Q Consensus 285 aL~~g~i~ga 294 (342)
.....++.|.
T Consensus 165 ~~p~~rViG~ 174 (450)
T 1s6y_A 165 YTKQEKVVGL 174 (450)
T ss_dssp HCCCCCEEEC
T ss_pred hCCCCCEEEe
Confidence 4322244444
No 317
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.86 E-value=0.0078 Score=58.38 Aligned_cols=39 Identities=21% Similarity=0.452 Sum_probs=34.8
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhh
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~ 201 (342)
-+.|++|+|+|-|.+|+.+++.+ +.+|.+|+++|+++..
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa-~~lG~~v~v~d~~~~~ 70 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAA-QSMGYRVAVLDPDPAS 70 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEECCCCcC
Confidence 46899999999999999999985 7999999999987653
No 318
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.86 E-value=0.011 Score=55.36 Aligned_cols=92 Identities=17% Similarity=0.163 Sum_probs=62.4
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
.|.+|.|+|.|.||...++.+ +.+|++|++.++++++.. +..+++ .... . .+.+++.+..|+|+-+
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~~~~lG-------a~~v-~---~~~~~~~~~~D~vid~ 241 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYA-VAMGAEVSVFARNEHKKQ--DALSMG-------VKHF-Y---TDPKQCKEELDFIIST 241 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHH-HHTTCEEEEECSSSTTHH--HHHHTT-------CSEE-E---SSGGGCCSCEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHH-HHCCCeEEEEeCCHHHHH--HHHhcC-------CCee-c---CCHHHHhcCCCEEEEC
Confidence 478999999999999999985 899999999998876532 112222 1110 0 2223333378999988
Q ss_pred CCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 244 lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
+.... .-...++.++++..++.++..
T Consensus 242 ~g~~~-----~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 242 IPTHY-----DLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp CCSCC-----CHHHHHTTEEEEEEEEECCCC
T ss_pred CCcHH-----HHHHHHHHHhcCCEEEEECCC
Confidence 77432 224567788888888888643
No 319
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=95.84 E-value=0.04 Score=53.44 Aligned_cols=118 Identities=18% Similarity=0.264 Sum_probs=73.7
Q ss_pred ccccCCCEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCCh---------hhHHHHHHhhhhhhhccCCCCCccccccCC
Q 019328 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQ---------ATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (342)
Q Consensus 160 g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (342)
|.++.|+||.|-|+|++|+.+|+.| ...|++|+ +.|.+- .....++.+..+ ...... ....+
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l-~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g------~i~~~~-a~~~~ 287 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFM-HDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFG------MVTNLF-TDVIT 287 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHH-HHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSS------CCGGGC-SCCBC
T ss_pred CCCcccCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhC------CCCCCC-cEEec
Confidence 3579999999999999999999997 67899986 445541 111111111000 000000 11234
Q ss_pred HHHHh-hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccE
Q 019328 230 MDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 230 l~ell-~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~g 293 (342)
.++++ ..||+++-|-. .+.|+.+....++ -.+++-.+-+++- . +-.+.|.+..|.-
T Consensus 288 ~~~i~~~~~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~t-~-eA~~iL~~rGI~~ 344 (424)
T 3k92_A 288 NEELLEKDCDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPTT-I-DATKILNERGVLL 344 (424)
T ss_dssp HHHHHHSCCSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCBC-H-HHHHHHHHTTCEE
T ss_pred CccceeccccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCCC-H-HHHHHHHHCCCEE
Confidence 55654 56999987754 5678888888884 5678888888863 3 3356677666533
No 320
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=95.83 E-value=0.047 Score=50.85 Aligned_cols=109 Identities=18% Similarity=0.312 Sum_probs=71.0
Q ss_pred ccCCCEEEEEcc---ChHHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcC
Q 019328 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 162 ~l~gktvGIiG~---G~IG~~vA~~l~~a~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~s 237 (342)
.+.|++|+++|= |++.++.+..+ ..| |++|.+..|..-...+...+. .+..+ .......++++.++++
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~~g~~v~~~~P~~~~~~~~~~~~----~~~~g---~~~~~~~d~~eav~~a 222 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQAL-AKFDGNRFYFIAPDALAMPQYILDM----LDEKG---IAWSLHSSIEEVMAEV 222 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHH-HTSSSCEEEEECCGGGCCCHHHHHH----HHHTT---CCEEECSCGGGTTTTC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HhCCCCEEEEECCcccccCHHHHHH----HHHcC---CeEEEEcCHHHHhcCC
Confidence 478999999998 59999999997 688 999999987532111111110 11111 1223357899999999
Q ss_pred CEEEEcCCCCc----cc------ccccCHhHHccCCCCcEEEecC-CCccCC
Q 019328 238 DVISLHPVLDK----TT------YHLINKERLATMKKEAILVNCS-RGPVID 278 (342)
Q Consensus 238 DiV~l~lplt~----~t------~~li~~~~l~~mk~gailIN~s-RG~~vd 278 (342)
|+|..-.-..+ +. .--++.+.++.+||+++|.-+. ||.=|+
T Consensus 223 Dvvyt~~~q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lPrg~EI~ 274 (310)
T 3csu_A 223 DILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIA 274 (310)
T ss_dssp SEEEECC-----------------CCBCGGGGTTCCTTCEEECCSCCSSSBC
T ss_pred CEEEECCccccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCCCCCCeec
Confidence 99988754221 11 1346888999999999988775 544343
No 321
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.82 E-value=0.015 Score=54.79 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=25.6
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLY 198 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~ 198 (342)
.+|||+|+|.||+.+.|.|...-.++|.+.+..
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~ 34 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL 34 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 379999999999999998743346788766543
No 322
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.82 E-value=0.014 Score=54.21 Aligned_cols=67 Identities=10% Similarity=0.051 Sum_probs=46.9
Q ss_pred CEEEEEcc-ChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh---------
Q 019328 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--------- 234 (342)
Q Consensus 166 ktvGIiG~-G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell--------- 234 (342)
.++||||+ |.||+..++.+ +..+.++. ++|+++... .....+ .....+.++++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l-~~~~~~lvav~d~~~~~~--~~~~~~-----------~~~~~~~~~~~ll~~~~~l~~~ 69 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAI-KEVGGVLVASLDPATNVG--LVDSFF-----------PEAEFFTEPEAFEAYLEDLRDR 69 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHH-HHTTCEEEEEECSSCCCG--GGGGTC-----------TTCEEESCHHHHHHHHHHHHHT
T ss_pred eEEEEECCChHHHHHHHHHH-HhCCCEEEEEEcCCHHHH--HHHhhC-----------CCCceeCCHHHHHHHhhhhccc
Confidence 58999999 78999999987 56688755 678876531 110000 0123457888888
Q ss_pred -hcCCEEEEcCCC
Q 019328 235 -READVISLHPVL 246 (342)
Q Consensus 235 -~~sDiV~l~lpl 246 (342)
.+.|+|+++.|.
T Consensus 70 ~~~vD~V~I~tP~ 82 (312)
T 3o9z_A 70 GEGVDYLSIASPN 82 (312)
T ss_dssp TCCCSEEEECSCG
T ss_pred CCCCcEEEECCCc
Confidence 678999999993
No 323
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.81 E-value=0.017 Score=57.13 Aligned_cols=98 Identities=16% Similarity=0.284 Sum_probs=68.2
Q ss_pred cccCCCEEEEEccC----------hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCH
Q 019328 161 NLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (342)
Q Consensus 161 ~~l~gktvGIiG~G----------~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (342)
..+.|++|+|+|+- .=...+++.| ...|++|.+|||.... + ... ....++
T Consensus 349 ~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L-~~~g~~V~~~DP~~~~--------~---------~~~--~~~~~~ 408 (478)
T 3g79_A 349 KKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLC-LKAGASVMVHDPYVVN--------Y---------PGV--EISDNL 408 (478)
T ss_dssp CCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHH-HHHTCEEEEECSSCCC--------B---------TTB--CEESCH
T ss_pred cCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHH-HHCCCEEEEECCCccc--------c---------cCc--ceecCH
Confidence 46899999999984 2357888987 6889999999998642 0 001 123688
Q ss_pred HHHhhcCCEEEEcCCCCcccccccCHh-HHccCC-CCcEEEecCCCccCCHHHH
Q 019328 231 DEVLREADVISLHPVLDKTTYHLINKE-RLATMK-KEAILVNCSRGPVIDEVAL 282 (342)
Q Consensus 231 ~ell~~sDiV~l~lplt~~t~~li~~~-~l~~mk-~gailIN~sRG~~vd~~aL 282 (342)
++.++.||.|+++++- ++-+. ++-+ ..+.|+ ++.+++++ |+- +|.+.+
T Consensus 409 ~~~~~~ad~vvi~t~~-~~f~~-~d~~~~~~~~~~~~~~i~D~-rn~-~~~~~~ 458 (478)
T 3g79_A 409 EEVVRNADAIVVLAGH-SAYSS-LKADWAKKVSAKANPVIIDG-RNV-IEPDEF 458 (478)
T ss_dssp HHHHTTCSEEEECSCC-HHHHS-CCHHHHHHHHCCSSCEEEES-SSC-SCHHHH
T ss_pred HHHHhcCCEEEEecCC-HHHHh-hhHHHHHHHhccCCCEEEEC-CCC-CCHHHH
Confidence 9999999999999873 33333 3443 445677 47899994 554 455443
No 324
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=95.80 E-value=0.024 Score=53.54 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=44.7
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEE-EcCChhhHHHHHHhhhhhhhccCCCC-----CccccccCCHHHHhhcCCE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQ-----PVTWKRASSMDEVLREADV 239 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~ell~~sDi 239 (342)
.+|||+|+|.||+.+++.+...-++++.+ .|+++...... ....+......... ..+.....+++++++++|+
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~-a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDv 80 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFI-AHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDI 80 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHH-HHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSE
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHH-HHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCE
Confidence 37999999999999999875334677664 46553321111 11000000000000 0001112356777788999
Q ss_pred EEEcCCCC
Q 019328 240 ISLHPVLD 247 (342)
Q Consensus 240 V~l~lplt 247 (342)
|+.|+|..
T Consensus 81 V~~aTp~~ 88 (340)
T 1b7g_O 81 VVDTTPNG 88 (340)
T ss_dssp EEECCSTT
T ss_pred EEECCCCc
Confidence 99999854
No 325
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.80 E-value=0.0069 Score=57.35 Aligned_cols=95 Identities=14% Similarity=0.157 Sum_probs=63.5
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCCh---hhHHHHHHhhhhhhhccCCCCCccccccCCH-HHHh---
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQ---ATRLEKFVTAYGQFLKANGEQPVTWKRASSM-DEVL--- 234 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ell--- 234 (342)
.+.|++|.|+|.|.||..+++.+ +.+|++|++.+++. ++. ++...++.. .. . .. ++ +++.
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a-~~~Ga~Vi~~~~~~~~~~~~--~~~~~~ga~-------~v-~-~~-~~~~~~~~~~ 244 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLF-RTYGLEVWMANRREPTEVEQ--TVIEETKTN-------YY-N-SS-NGYDKLKDSV 244 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHH-HHHTCEEEEEESSCCCHHHH--HHHHHHTCE-------EE-E-CT-TCSHHHHHHH
T ss_pred cCCCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCccchHHH--HHHHHhCCc-------ee-c-hH-HHHHHHHHhC
Confidence 57799999999999999999985 78999999999876 432 222222210 00 0 00 11 1121
Q ss_pred hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 235 ~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
...|+|+.++...... + ...++.|+++..+|+++-
T Consensus 245 ~~~d~vid~~g~~~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 245 GKFDVIIDATGADVNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCEEEEEECCCCCTHH---H-HHHGGGEEEEEEEEECSC
T ss_pred CCCCEEEECCCChHHH---H-HHHHHHHhcCCEEEEEec
Confidence 3589999998743321 0 456788899999999874
No 326
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.79 E-value=0.017 Score=56.49 Aligned_cols=120 Identities=18% Similarity=0.101 Sum_probs=70.2
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc-CCEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE-ADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~-sDiV 240 (342)
++.||+|.|||+|..|.++|+.| ...|++|.++|....... ...+ .++..+. ....-...++++.. +|+|
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l-~~~G~~V~~~D~~~~~~~-~~~~----~L~~~gi---~~~~g~~~~~~~~~~~d~v 76 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLL-AKLGAIVTVNDGKPFDEN-PTAQ----SLLEEGI---KVVCGSHPLELLDEDFCYM 76 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHH-HHTTCEEEEEESSCGGGC-HHHH----HHHHTTC---EEEESCCCGGGGGSCEEEE
T ss_pred hcCCCEEEEEeeCHHHHHHHHHH-HhCCCEEEEEeCCcccCC-hHHH----HHHhCCC---EEEECCChHHhhcCCCCEE
Confidence 57899999999999999999997 689999999998653110 0000 1111121 11111223456666 8999
Q ss_pred EEc--CCCC-ccc-----c--cccCH-hHHcc-CCCCcEEEecCCCccCCHHHHHHHHHcCC
Q 019328 241 SLH--PVLD-KTT-----Y--HLINK-ERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 241 ~l~--lplt-~~t-----~--~li~~-~~l~~-mk~gailIN~sRG~~vd~~aL~~aL~~g~ 290 (342)
++. +|.+ |+. + .++++ +.+.. ++...+-|-=+.|..--..-+...|+...
T Consensus 77 v~spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 138 (451)
T 3lk7_A 77 IKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG 138 (451)
T ss_dssp EECTTSCTTSHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred EECCcCCCCChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 886 4322 211 1 13443 33333 34333444445787776777777787644
No 327
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=95.79 E-value=0.014 Score=55.65 Aligned_cols=93 Identities=13% Similarity=0.139 Sum_probs=65.7
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
-.++-|+|.|.+|+++|+.+ +.+|++|.++|+++... + .+-+..+|-++...
T Consensus 199 ~~~L~I~GaGhva~aLa~la-~~lgf~V~v~D~R~~~~--------------------------~-~~~fp~a~~v~~~~ 250 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFA-SNVGFYTVVTDWRPNQC--------------------------E-KHFFPDADEIIVDF 250 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHH-HHHTEEEEEEESCGGGG--------------------------C-GGGCTTCSEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHH-HHCCCeEEEECCCcccc--------------------------c-cccCCCceEEecCC
Confidence 45799999999999999985 79999999999876421 0 01134456555443
Q ss_pred CCCcccccccCHhHHcc--CCCCcEEEecCCCccCCHHHHHHHHHcCCccEEEe
Q 019328 245 VLDKTTYHLINKERLAT--MKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGL 296 (342)
Q Consensus 245 plt~~t~~li~~~~l~~--mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaal 296 (342)
| .+.+.. +.+++++|=+.++.-.|...|.++|++ .....|+
T Consensus 251 p----------~~~~~~~~~~~~t~vvv~TH~h~~D~~~L~~aL~~-~~~YiG~ 293 (362)
T 3on5_A 251 P----------ADFLRKFLIRPDDFVLIMTHHFQKDQEILHFLLEK-ELRYIGI 293 (362)
T ss_dssp H----------HHHHHHSCCCTTCEEEECCSCHHHHHHHHHHHSSS-CCSEEEE
T ss_pred H----------HHHHhhcCCCCCeEEEEEeCCchhhHHHHHHHhcC-CCCEEEE
Confidence 3 223333 567888888888888898888888876 3444443
No 328
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.78 E-value=0.011 Score=50.51 Aligned_cols=95 Identities=16% Similarity=0.163 Sum_probs=58.9
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCH-HHHh-----hc
Q 019328 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM-DEVL-----RE 236 (342)
Q Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ell-----~~ 236 (342)
.|++|.|.| .|.||+.+++.+ +..|++|++.+++.+.... ....+ ..........+. +.+. ..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~-~~~G~~V~~~~~~~~~~~~--~~~~g-------~~~~~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIA-KMIGARIYTTAGSDAKREM--LSRLG-------VEYVGDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHH-HHHTCEEEEEESSHHHHHH--HHTTC-------CSEEEETTCSTHHHHHHHHTTTCC
T ss_pred CCCEEEEeeCCChHHHHHHHHH-HHcCCEEEEEeCCHHHHHH--HHHcC-------CCEEeeCCcHHHHHHHHHHhCCCC
Confidence 578999999 699999999986 6889999999987654211 11111 100000011122 2222 13
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
.|+++.+.. .+ .....++.|+++..+|+++..
T Consensus 108 ~D~vi~~~g--~~----~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 108 VDVVLNSLA--GE----AIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp EEEEEECCC--TH----HHHHHHHTEEEEEEEEECSCG
T ss_pred CeEEEECCc--hH----HHHHHHHHhccCCEEEEEcCC
Confidence 788887764 22 135677888888888888653
No 329
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.77 E-value=0.0084 Score=56.29 Aligned_cols=95 Identities=15% Similarity=0.086 Sum_probs=62.1
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh------c
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------E 236 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------~ 236 (342)
.|++|.|+|.|.||..+++.+ +.+|+ +|++.+++.++.. +..+++. .........++.+.+. .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~~Vi~~~~~~~~~~--~~~~~Ga-------~~~~~~~~~~~~~~v~~~~~g~g 236 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVA-KASGAYPVIVSEPSDFRRE--LAKKVGA-------DYVINPFEEDVVKEVMDITDGNG 236 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HHTTCCSEEEECSCHHHHH--HHHHHTC-------SEEECTTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--HHHHhCC-------CEEECCCCcCHHHHHHHHcCCCC
Confidence 789999999999999999985 79999 9999999865422 1122221 0000011123433322 4
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+|+.++...+ + -...++.++++..+++++.
T Consensus 237 ~D~vid~~g~~~-~----~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 237 VDVFLEFSGAPK-A----LEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEEEEECSCCHH-H----HHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCCHH-H----HHHHHHHHhcCCEEEEEcc
Confidence 799998887322 1 2456777888889988864
No 330
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.75 E-value=0.014 Score=54.52 Aligned_cols=96 Identities=11% Similarity=0.157 Sum_probs=62.4
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh----hcCCE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL----READV 239 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell----~~sDi 239 (342)
.|++|.|+|.|.||..+++.+ +.+|++|++.+++..+... ..+++ ..........++.+.+ ...|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~--~~~lG-------a~~~~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYA-KAMGLNVVAVDIGDEKLEL--AKELG-------ADLVVNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHH-HHTTCEEEEECSCHHHHHH--HHHTT-------CSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHHH--HHHCC-------CCEEecCCCccHHHHHHHHhCCCCE
Confidence 478999999999999999985 7899999999988654321 11221 1000000112333222 46899
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
|+.++...+ + -...++.|+++..++.++..
T Consensus 234 vid~~g~~~-~----~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 234 AVVTAVSKP-A----FQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp EEESSCCHH-H----HHHHHHHEEEEEEEEECCCC
T ss_pred EEECCCCHH-H----HHHHHHHhhcCCEEEEeccc
Confidence 998887322 1 24567788899899888753
No 331
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.74 E-value=0.015 Score=54.93 Aligned_cols=97 Identities=18% Similarity=0.149 Sum_probs=62.1
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccC-CHHH-HhhcCCEEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS-SMDE-VLREADVIS 241 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~e-ll~~sDiV~ 241 (342)
.|.+|.|+|.|.||...++.+ +.+|++|++.+++..+... ...++ .......... ++.+ +....|+|+
T Consensus 179 ~g~~VlV~GaG~vG~~~~qla-k~~Ga~Vi~~~~~~~~~~~--~~~lG-------a~~v~~~~~~~~~~~~~~~~~D~vi 248 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLIS-KAMGAETYVISRSSRKRED--AMKMG-------ADHYIATLEEGDWGEKYFDTFDLIV 248 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCEEEEEESSSTTHHH--HHHHT-------CSEEEEGGGTSCHHHHSCSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHHH--HHHcC-------CCEEEcCcCchHHHHHhhcCCCEEE
Confidence 478999999999999999985 7899999999987654321 11222 1100001111 3322 224689999
Q ss_pred EcCCCC-cccccccCHhHHccCCCCcEEEecCCC
Q 019328 242 LHPVLD-KTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 242 l~lplt-~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
.++..+ +++ -...++.++++..++.++..
T Consensus 249 d~~g~~~~~~----~~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 249 VCASSLTDID----FNIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp ECCSCSTTCC----TTTGGGGEEEEEEEEECCCC
T ss_pred ECCCCCcHHH----HHHHHHHhcCCCEEEEecCC
Confidence 998752 111 23467778888888888643
No 332
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.68 E-value=0.041 Score=52.07 Aligned_cols=95 Identities=18% Similarity=0.145 Sum_probs=63.0
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCc-cccc-cCCHHHHhh-----
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKR-ASSMDEVLR----- 235 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~l~ell~----- 235 (342)
.|++|.|+|.|.||...++.+ +.+|+ +|++.++++.+... ..+++ .... .... ..++.+.+.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~~~--~~~lG-------a~~vi~~~~~~~~~~~~~~~~~~~ 261 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGC-HSAGAKRIIAVDLNPDKFEK--AKVFG-------ATDFVNPNDHSEPISQVLSKMTNG 261 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCGGGHHH--HHHTT-------CCEEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCCHHHHHH--HHHhC-------CceEEeccccchhHHHHHHHHhCC
Confidence 578999999999999999985 89999 89999987654321 12222 1100 0000 123444433
Q ss_pred cCCEEEEcCCCCcccccccCHhHHccCCCC-cEEEecCC
Q 019328 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~~li~~~~l~~mk~g-ailIN~sR 273 (342)
..|+|+-++...+ + -...++.++++ ..++.++-
T Consensus 262 g~D~vid~~g~~~-~----~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 262 GVDFSLECVGNVG-V----MRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CBSEEEECSCCHH-H----HHHHHHTBCTTTCEEEECSC
T ss_pred CCCEEEECCCCHH-H----HHHHHHHhhcCCcEEEEEcC
Confidence 4799999887322 1 24578889998 88988874
No 333
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.68 E-value=0.0041 Score=54.87 Aligned_cols=102 Identities=11% Similarity=0.120 Sum_probs=62.1
Q ss_pred cCCCEEEEEc-cChHHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc--cccccCCHHHHhhcCC
Q 019328 163 LKGQTVGVIG-AGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREAD 238 (342)
Q Consensus 163 l~gktvGIiG-~G~IG~~vA~~l~~a~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~sD 238 (342)
...|++.|.| .|.||+.+++.| ..-| .+|++++|++...... ........ ......+++++++.+|
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L-~~~G~~~V~~~~R~~~~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~~~~D 90 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQL-ADKQTIKQTLFARQPAKIHKP---------YPTNSQIIMGDVLNHAALKQAMQGQD 90 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHH-TTCTTEEEEEEESSGGGSCSS---------CCTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHH-HhCCCceEEEEEcChhhhccc---------ccCCcEEEEecCCCHHHHHHHhcCCC
Confidence 4568999999 699999999998 5778 8999999986542100 00000000 0111235677889999
Q ss_pred EEEEcCCCCcccccccCHhHHccCCC--CcEEEecCCCcc
Q 019328 239 VISLHPVLDKTTYHLINKERLATMKK--EAILVNCSRGPV 276 (342)
Q Consensus 239 iV~l~lplt~~t~~li~~~~l~~mk~--gailIN~sRG~~ 276 (342)
+|+.+....... ......+..|+. ...||++|....
T Consensus 91 ~vv~~a~~~~~~--~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 91 IVYANLTGEDLD--IQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp EEEEECCSTTHH--HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred EEEEcCCCCchh--HHHHHHHHHHHHcCCCEEEEEeccee
Confidence 999887643211 112334454532 247888887544
No 334
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.67 E-value=0.023 Score=53.76 Aligned_cols=77 Identities=25% Similarity=0.327 Sum_probs=48.8
Q ss_pred cCCCEEEEEcc-ChHHHHHHHHHHhcCC--cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 163 LKGQTVGVIGA-GRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 163 l~gktvGIiG~-G~IG~~vA~~l~~a~g--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
+.+++|+|||. |.+|..+|..++ .+| -+|..+|....+. +...... .+............+..+.++.||+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~-~~g~~~evvLiDi~~~k~-~g~a~DL----~~~~~~~~~i~~t~d~~~al~dADv 79 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAA-MMRLTPNLCLYDPFAVGL-EGVAEEI----RHCGFEGLNLTFTSDIKEALTDAKY 79 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHH-HTTCCSCEEEECSCHHHH-HHHHHHH----HHHCCTTCCCEEESCHHHHHTTEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-hcCCCCEEEEEeCCchhH-HHHHHhh----hhCcCCCCceEEcCCHHHHhCCCCE
Confidence 45789999998 999999998763 455 4899999976432 1111111 1100011111223578888999999
Q ss_pred EEEcCC
Q 019328 240 ISLHPV 245 (342)
Q Consensus 240 V~l~lp 245 (342)
|+++.-
T Consensus 80 VvitaG 85 (343)
T 3fi9_A 80 IVSSGG 85 (343)
T ss_dssp EEECCC
T ss_pred EEEccC
Confidence 999853
No 335
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.64 E-value=0.018 Score=53.55 Aligned_cols=109 Identities=14% Similarity=0.093 Sum_probs=69.4
Q ss_pred cccCCCEEEEE-cc-ChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--
Q 019328 161 NLLKGQTVGVI-GA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-- 235 (342)
Q Consensus 161 ~~l~gktvGIi-G~-G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-- 235 (342)
.-+..+++.|| |+ |++|+.+++.+ +.+|.+++ ..+|..... .-.+...+.+++++.+
T Consensus 9 ~l~~~~siaVV~Gasg~~G~~~~~~l-~~~G~~~v~~VnP~~~g~-----------------~i~G~~vy~sl~el~~~~ 70 (305)
T 2fp4_A 9 LYVDKNTKVICQGFTGKQGTFHSQQA-LEYGTNLVGGTTPGKGGK-----------------THLGLPVFNTVKEAKEQT 70 (305)
T ss_dssp GCCCTTCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTTC-----------------EETTEEEESSHHHHHHHH
T ss_pred HHhCCCcEEEEECCCCCHHHHHHHHH-HHCCCcEEEEeCCCcCcc-----------------eECCeeeechHHHhhhcC
Confidence 34677889999 99 99999999997 67888844 556642100 0012334568999998
Q ss_pred cCCEEEEcCCCCccc-ccccCHhHHccCCCCcEEEecCCCcc-CCHHHHHHHHHcC-Ccc
Q 019328 236 EADVISLHPVLDKTT-YHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQN-PMF 292 (342)
Q Consensus 236 ~sDiV~l~lplt~~t-~~li~~~~l~~mk~gailIN~sRG~~-vd~~aL~~aL~~g-~i~ 292 (342)
..|++++++| ++. ...+ ++.++. .-+ .+++.+-|-. -|+..+.+..++. .+.
T Consensus 71 ~vD~avI~vP--~~~~~~~~-~e~i~~-Gi~-~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 71 GATASVIYVP--PPFAAAAI-NEAIDA-EVP-LVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp CCCEEEECCC--HHHHHHHH-HHHHHT-TCS-EEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred CCCEEEEecC--HHHHHHHH-HHHHHC-CCC-EEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 8999999999 332 3332 222221 222 4456666643 2344788888876 543
No 336
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.63 E-value=0.043 Score=52.14 Aligned_cols=98 Identities=13% Similarity=0.239 Sum_probs=55.2
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
...+|||+| +|.||+.+++.|...-.+++.+........ ..+...++.+ ......... ..+ ++.++.+|+|++
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~~~~~~~-~~~v~~dl~---~~~-~~~~~~vDvVf~ 88 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSMESVFPHL-RAQKLPTLV---SVK-DADFSTVDAVFC 88 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHHHHCGGG-TTSCCCCCB---CGG-GCCGGGCSEEEE
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHHHhCchh-cCcccccce---ecc-hhHhcCCCEEEE
Confidence 346899999 999999999997533346877765432211 1111111100 000000111 112 455678999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
|+|.... .+.....+.|+.+|+.|-
T Consensus 89 atp~~~s------~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 89 CLPHGTT------QEIIKELPTALKIVDLSA 113 (359)
T ss_dssp CCCTTTH------HHHHHTSCTTCEEEECSS
T ss_pred cCCchhH------HHHHHHHhCCCEEEECCc
Confidence 9994332 223333377899999875
No 337
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.62 E-value=0.014 Score=55.44 Aligned_cols=94 Identities=18% Similarity=0.276 Sum_probs=62.2
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCC---HHHHhhcCCEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVLREADVI 240 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell~~sDiV 240 (342)
.|.+|.|+|.|.||...++.+ +.+|++|++.++++++... ..+++. ... . ...+ .+++....|+|
T Consensus 194 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~Vi~~~~~~~~~~~--a~~lGa-------~~v-i-~~~~~~~~~~~~~g~Dvv 261 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLA-HAMGAHVVAFTTSEAKREA--AKALGA-------DEV-V-NSRNADEMAAHLKSFDFI 261 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSGGGHHH--HHHHTC-------SEE-E-ETTCHHHHHTTTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH--HHHcCC-------cEE-e-ccccHHHHHHhhcCCCEE
Confidence 478999999999999999985 8999999999987654321 112221 000 0 0111 22333568999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
+-++.... .-...++.|+++..++.++..
T Consensus 262 id~~g~~~-----~~~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 262 LNTVAAPH-----NLDDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp EECCSSCC-----CHHHHHTTEEEEEEEEECCCC
T ss_pred EECCCCHH-----HHHHHHHHhccCCEEEEeccC
Confidence 98887432 124567888999999988653
No 338
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.59 E-value=0.016 Score=54.05 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=61.0
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh----cCCE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR----EADV 239 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~----~sDi 239 (342)
.|.+|.|+|.|.||...++.+ +.+|++|++.++++++.. +...++ ..........++.+.+. ..|+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~~~~lG-------a~~~i~~~~~~~~~~~~~~~g~~d~ 235 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYA-RAMGLRVAAVDIDDAKLN--LARRLG-------AEVAVNARDTDPAAWLQKEIGGAHG 235 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHH-HHTTCEEEEEESCHHHHH--HHHHTT-------CSEEEETTTSCHHHHHHHHHSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEeCCHHHHH--HHHHcC-------CCEEEeCCCcCHHHHHHHhCCCCCE
Confidence 578999999999999999985 899999999998876432 222222 11110111123333332 5788
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
|+.+....+ + -...++.++++..++.++-
T Consensus 236 vid~~g~~~-~----~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 236 VLVTAVSPK-A----FSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp EEESSCCHH-H----HHHHHHHEEEEEEEEECSC
T ss_pred EEEeCCCHH-H----HHHHHHHhccCCEEEEeCC
Confidence 888875322 1 2456677888888888753
No 339
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.58 E-value=0.021 Score=53.19 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=46.5
Q ss_pred CEEEEEcc-ChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh---------
Q 019328 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--------- 234 (342)
Q Consensus 166 ktvGIiG~-G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell--------- 234 (342)
.++||||+ |.||+..++.+ +..+.++. ++|+++... .+...+ .....+.++++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l-~~~~~~lvav~d~~~~~~--~~~~~~-----------~~~~~~~~~~~ll~~~~~l~~~ 69 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAI-KDTGNCLVSAYDINDSVG--IIDSIS-----------PQSEFFTEFEFFLDHASNLKRD 69 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHH-HHTTCEEEEEECSSCCCG--GGGGTC-----------TTCEEESSHHHHHHHHHHHTTS
T ss_pred eEEEEECCCcHHHHHHHHHH-HhCCCEEEEEEcCCHHHH--HHHhhC-----------CCCcEECCHHHHHHhhhhhhhc
Confidence 58999999 78999999987 46688755 678876431 110000 0123457888887
Q ss_pred --hcCCEEEEcCCC
Q 019328 235 --READVISLHPVL 246 (342)
Q Consensus 235 --~~sDiV~l~lpl 246 (342)
.+.|+|+++.|.
T Consensus 70 ~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 70 SATALDYVSICSPN 83 (318)
T ss_dssp TTTSCCEEEECSCG
T ss_pred cCCCCcEEEECCCc
Confidence 568999999993
No 340
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.57 E-value=0.032 Score=52.77 Aligned_cols=95 Identities=15% Similarity=0.186 Sum_probs=52.9
Q ss_pred CEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
.+|||+| .|.||+.+.+.|...=.+++.+.....+.. ..+...++.+ .+.... ...++++ +..+|+|++|+
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g-~~~~~~~~~~---~g~~~~---~~~~~~~-~~~vDvV~~a~ 76 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG-EPVHFVHPNL---RGRTNL---KFVPPEK-LEPADILVLAL 76 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT-SBGGGTCGGG---TTTCCC---BCBCGGG-CCCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC-chhHHhCchh---cCcccc---cccchhH-hcCCCEEEEcC
Confidence 5899999 899999999997433346777654432211 0010001100 000111 1223444 47899999999
Q ss_pred CCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 245 VLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 245 plt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
|.... +.+. . ..++.|+.+|+.|-
T Consensus 77 g~~~s-~~~a-~---~~~~aG~~VId~Sa 100 (345)
T 2ozp_A 77 PHGVF-AREF-D---RYSALAPVLVDLSA 100 (345)
T ss_dssp CTTHH-HHTH-H---HHHTTCSEEEECSS
T ss_pred CcHHH-HHHH-H---HHHHCCCEEEEcCc
Confidence 95432 2211 1 22367888998875
No 341
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.56 E-value=0.043 Score=51.92 Aligned_cols=95 Identities=17% Similarity=0.110 Sum_probs=62.0
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCc-cccc-cCCHHHHhh-----
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKR-ASSMDEVLR----- 235 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~l~ell~----- 235 (342)
.|++|.|+|.|.||...++.+ +.+|+ +|++.++++.+.. +..+++ .... .... ..++.+.+.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~~--~~~~lG-------a~~vi~~~~~~~~~~~~~~~~~~~ 260 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFA--KAKEVG-------ATECVNPQDYKKPIQEVLTEMSNG 260 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCGGGHH--HHHHTT-------CSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHHH--HHHHhC-------CceEecccccchhHHHHHHHHhCC
Confidence 578999999999999999985 89999 8999998765432 112222 1100 0000 123444332
Q ss_pred cCCEEEEcCCCCcccccccCHhHHccCCCC-cEEEecCC
Q 019328 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~~li~~~~l~~mk~g-ailIN~sR 273 (342)
..|+|+-++...+ + -...++.++++ ..++.++-
T Consensus 261 g~D~vid~~g~~~-~----~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 261 GVDFSFEVIGRLD-T----MVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CBSEEEECSCCHH-H----HHHHHHHBCTTTCEEEECSC
T ss_pred CCcEEEECCCCHH-H----HHHHHHHhhcCCcEEEEecc
Confidence 4799999887322 2 24567888998 88888864
No 342
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.56 E-value=0.0047 Score=56.67 Aligned_cols=40 Identities=18% Similarity=0.172 Sum_probs=36.0
Q ss_pred ccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChh
Q 019328 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 160 g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~ 200 (342)
..++.|++|.|||.|.+|...++.| ...|++|.++++...
T Consensus 8 ~~~l~~k~VLVVGgG~va~rka~~L-l~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 8 AHQLKDKRILLIGGGEVGLTRLYKL-MPTGCKLTLVSPDLH 47 (274)
T ss_dssp EECCTTCEEEEEEESHHHHHHHHHH-GGGTCEEEEEEEEEC
T ss_pred EEEcCCCEEEEECCcHHHHHHHHHH-HhCCCEEEEEcCCCC
Confidence 3579999999999999999999998 689999999998654
No 343
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.53 E-value=0.027 Score=53.27 Aligned_cols=68 Identities=15% Similarity=0.212 Sum_probs=47.4
Q ss_pred CCEEEEEccChHHH-HHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc--CCEE
Q 019328 165 GQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (342)
Q Consensus 165 gktvGIiG~G~IG~-~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--sDiV 240 (342)
-.+|||||+|.+|. .++..+ +.-++++. ++|+++... +.+.+.++ ....+.+++++++. .|+|
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~-~~~~~~lvav~d~~~~~a-~~~a~~~~-----------~~~~~~~~~~ll~~~~vD~V 92 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCL-LRAGARLAGFHEKDDALA-AEFSAVYA-----------DARRIATAEEILEDENIGLI 92 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHH-HHTTCEEEEEECSCHHHH-HHHHHHSS-----------SCCEESCHHHHHTCTTCCEE
T ss_pred CcEEEEECcCHHHHHHHHHHh-hcCCcEEEEEEcCCHHHH-HHHHHHcC-----------CCcccCCHHHHhcCCCCCEE
Confidence 46899999999995 466665 45688855 678887542 23322221 01235799999976 8999
Q ss_pred EEcCC
Q 019328 241 SLHPV 245 (342)
Q Consensus 241 ~l~lp 245 (342)
+++.|
T Consensus 93 ~I~tp 97 (361)
T 3u3x_A 93 VSAAV 97 (361)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 99999
No 344
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.53 E-value=0.0095 Score=51.73 Aligned_cols=101 Identities=9% Similarity=0.189 Sum_probs=61.2
Q ss_pred CCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChh-hHHHHHHhhhhhhhccCCCCCc--cccccCCHHHHhhcCCEE
Q 019328 165 GQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQA-TRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVI 240 (342)
Q Consensus 165 gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~sDiV 240 (342)
.|++.|.| .|.||+.+++.|++.-|++|++.+|++. .. +.... ........ ......+++++++.+|+|
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~-~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~d~v 77 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI-PPEII------DHERVTVIEGSFQNPGXLEQAVTNAEVV 77 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHS-CHHHH------TSTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccc-hhhcc------CCCceEEEECCCCCHHHHHHHHcCCCEE
Confidence 36799999 5999999999984267999999999865 31 11100 00000000 011123567788999999
Q ss_pred EEcCCCCcccccccCHhHHccCCC-C-cEEEecCCCcc
Q 019328 241 SLHPVLDKTTYHLINKERLATMKK-E-AILVNCSRGPV 276 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~-g-ailIN~sRG~~ 276 (342)
+.+..... .. ....+..|+. + ..||++|....
T Consensus 78 v~~ag~~n-~~---~~~~~~~~~~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 78 FVGAMESG-SD---MASIVKALSRXNIRRVIGVSMAGL 111 (221)
T ss_dssp EESCCCCH-HH---HHHHHHHHHHTTCCEEEEEEETTT
T ss_pred EEcCCCCC-hh---HHHHHHHHHhcCCCeEEEEeecee
Confidence 99987431 11 3445555542 2 36888876543
No 345
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.53 E-value=0.052 Score=51.49 Aligned_cols=31 Identities=29% Similarity=0.480 Sum_probs=24.9
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d 196 (342)
.+|||+|+|.||+.+.|.|...-+++|.+.+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivain 48 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAIN 48 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEec
Confidence 3899999999999999987433367877665
No 346
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.53 E-value=0.028 Score=53.05 Aligned_cols=31 Identities=29% Similarity=0.527 Sum_probs=24.7
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d 196 (342)
.+|||+|+|+||+.++|.+...-+++|.+..
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~ 34 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVN 34 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEE
Confidence 3899999999999999987433367877654
No 347
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=95.51 E-value=0.07 Score=51.74 Aligned_cols=122 Identities=17% Similarity=0.199 Sum_probs=70.2
Q ss_pred ccccCCCEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCC----------hhhHHHHHHhhhhh--hhccCCCCCccccc
Q 019328 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY----------QATRLEKFVTAYGQ--FLKANGEQPVTWKR 226 (342)
Q Consensus 160 g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 226 (342)
|.++.|+++.|.|+|++|+.+|+.| ..+|++|+ +.|.+ .. ....+.+..+. ........ . ...
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L-~e~GakVVavsD~~G~i~dp~GlD~~-~l~~~k~~~g~~~v~~y~~~~-~-~~~ 280 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWL-EKMGAKVIAVSDINGVAYRKEGLNVE-LIQKNKGLTGPALVELFTTKD-N-AEF 280 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHH-HTTTCEEEEEECSSCEEECTTCCCTH-HHHHTTTSCHHHHHHHHHHTS-C-CCC
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEECCCcEEECCCCCCHH-HHHHHHHhhCCcccccccccc-C-ceE
Confidence 3479999999999999999999997 68999998 44442 11 11111111000 00000000 0 011
Q ss_pred cCCHHHHh-hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccE
Q 019328 227 ASSMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (342)
Q Consensus 227 ~~~l~ell-~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~g 293 (342)
..+.++++ ..||+++-|- +.+.|+.+....++- .+++--+-+++- .++- +.|.+..+.-
T Consensus 281 ~~~~~~~~~~~~Dil~P~A-----~~~~I~~~~a~~l~a-k~V~EgAN~p~t-~~a~-~~l~~~Gi~~ 340 (421)
T 1v9l_A 281 VKNPDAIFKLDVDIFVPAA-----IENVIRGDNAGLVKA-RLVVEGANGPTT-PEAE-RILYERGVVV 340 (421)
T ss_dssp CSSTTGGGGCCCSEEEECS-----CSSCBCTTTTTTCCC-SEEECCSSSCBC-HHHH-HHHHTTTCEE
T ss_pred eCCchhhhcCCccEEEecC-----cCCccchhhHHHcCc-eEEEecCCCcCC-HHHH-HHHHHCCCEE
Confidence 10234444 4799998885 345577777777753 477777888863 4443 5566655543
No 348
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=95.50 E-value=0.21 Score=47.02 Aligned_cols=113 Identities=13% Similarity=0.176 Sum_probs=68.9
Q ss_pred ccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV 240 (342)
.+.|+||++||= +++.++.+..+ ..||++|....|..-...+.+.+......+..+ .......+++ .++++|+|
T Consensus 172 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~v~~~~d~~-av~~aDvv 246 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCFSLGLIT-TKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSG---GSFLVTDDAS-SVEGADFL 246 (339)
T ss_dssp CGGGCEEEEESSCCHHHHHHHHHH-HHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHC---CEEEEECCGG-GGTTCSEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CEEEEECChh-HHcCCCEE
Confidence 588999999996 67888888886 589999999887531111111110000000001 1123356889 99999999
Q ss_pred EEcC--CCC--ccc----------ccccCHhHHccCCCCcEEEecC---CCccCCH
Q 019328 241 SLHP--VLD--KTT----------YHLINKERLATMKKEAILVNCS---RGPVIDE 279 (342)
Q Consensus 241 ~l~l--plt--~~t----------~~li~~~~l~~mk~gailIN~s---RG~~vd~ 279 (342)
..-+ ... .+. .--++.+.++.+||+++|.-+. ||.=|+.
T Consensus 247 ytd~w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcLPa~Rg~EIt~ 302 (339)
T 4a8t_A 247 YTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTD 302 (339)
T ss_dssp EECCSSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCH
T ss_pred EecCcccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCH
Confidence 9743 111 110 1335788888888888888764 5554443
No 349
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.50 E-value=0.043 Score=50.98 Aligned_cols=102 Identities=23% Similarity=0.227 Sum_probs=58.7
Q ss_pred CEEEEEccChHHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~-a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
++|+|||.|.+|..++..++. ...-++..+|...++. +............ ..+.... ..+ .+.++.||+|+++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~-~g~a~dl~~~~~~--~~~~~v~-~~~-~~a~~~aD~Vii~a 75 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLA-QAHAEDILHATPF--AHPVWVW-AGS-YGDLEGARAVVLAA 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHH-HHHHHHHHTTGGG--SCCCEEE-ECC-GGGGTTEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHH-HHHHHHHHHhHhh--cCCeEEE-ECC-HHHhCCCCEEEECC
Confidence 479999999999999998753 2335899999986432 2211111110000 0111111 123 56789999999997
Q ss_pred CCCcccccc-------cCH-------hHHccCCCCcEEEecCC
Q 019328 245 VLDKTTYHL-------INK-------ERLATMKKEAILVNCSR 273 (342)
Q Consensus 245 plt~~t~~l-------i~~-------~~l~~mk~gailIN~sR 273 (342)
+... ..++ .|. +.+....|+++++|++-
T Consensus 76 g~~~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 76 GVAQ-RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp CCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCC-CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 6432 2221 111 12233378999999844
No 350
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=95.49 E-value=0.014 Score=51.51 Aligned_cols=70 Identities=21% Similarity=0.285 Sum_probs=46.0
Q ss_pred CCEEEEEccChHHHHHHHHHH-hcCCcEEE-EEcCChh-hHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc--CCE
Q 019328 165 GQTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADV 239 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~-~a~g~~V~-~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--sDi 239 (342)
.++++|+|.|++|+.+++.+. ...|+++. ++|.++. .. +. +...+.......++++++++ .|+
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~ki--------G~----~~i~GvpV~~~~dL~~~v~~~~Id~ 151 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLV--------GK----TTEDGIPVYGISTINDHLIDSDIET 151 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTT--------TC----BCTTCCBEEEGGGHHHHC-CCSCCE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhcc--------Cc----eeECCeEEeCHHHHHHHHHHcCCCE
Confidence 357999999999999998621 35688876 5577665 31 10 00112222335678888874 899
Q ss_pred EEEcCCC
Q 019328 240 ISLHPVL 246 (342)
Q Consensus 240 V~l~lpl 246 (342)
+++++|.
T Consensus 152 vIIAvPs 158 (212)
T 3keo_A 152 AILTVPS 158 (212)
T ss_dssp EEECSCG
T ss_pred EEEecCc
Confidence 9999994
No 351
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.48 E-value=0.038 Score=52.96 Aligned_cols=101 Identities=16% Similarity=0.167 Sum_probs=61.3
Q ss_pred cCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh------h
Q 019328 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------R 235 (342)
Q Consensus 163 l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~ 235 (342)
-.|.+|.|+|.|.+|...++.+ +.+|+ +|++.++++.+.. +..+++. .........++.+.+ .
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~~~~lGa-------~~vi~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAIL-KHAGASKVILSEPSEVRRN--LAKELGA-------DHVIDPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCHHHHH--HHHHHTC-------SEEECTTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--HHHHcCC-------CEEEcCCCCCHHHHHHHHhCCC
Confidence 3588999999999999999985 89999 9999998875432 2222221 100001112333322 1
Q ss_pred cCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
..|+|+-++.....+...+.......++++..++.++-
T Consensus 282 g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 282 GAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 48999999874322222111111233389999998874
No 352
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.46 E-value=0.018 Score=54.36 Aligned_cols=35 Identities=29% Similarity=0.370 Sum_probs=29.3
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEE-EcCChhh
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQAT 201 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~-~d~~~~~ 201 (342)
.+|||.|||+||+.++|++ ..+|++|++ +||..+.
T Consensus 8 ~kvgInGFGRIGrlv~R~~-~~~~veivainDp~~d~ 43 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRAC-MEKGVKVVAVNDPFIDP 43 (346)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEEECTTCCH
T ss_pred eEEEEECCChHHHHHHHHH-HhCCCEEEEEeCCCCCh
Confidence 4899999999999999985 678899887 6776443
No 353
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.44 E-value=0.061 Score=50.40 Aligned_cols=96 Identities=16% Similarity=0.101 Sum_probs=62.4
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccc--cCCHHHH---h----
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEV---L---- 234 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~el---l---- 234 (342)
.|++|.|+|.|.+|...++.+ +.+|++|++.+++.++.. +...++. ....... ....+++ .
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~~~~lGa-------~~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAA-KAYGAFVVCTARSPRRLE--VAKNCGA-------DVTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHH--HHHHTTC-------SEEEECCTTTSCHHHHHHHHHHHS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEcCCHHHHH--HHHHhCC-------CEEEcCcccccHHHHHHHHhcccc
Confidence 478999999999999999985 799999999998765432 1122221 1000000 1112222 2
Q ss_pred -hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 235 -READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 235 -~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
...|+|+-++.... + -...++.++++..++.++.+
T Consensus 238 g~g~D~vid~~g~~~-~----~~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 238 GDLPNVTIDCSGNEK-C----ITIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SSCCSEEEECSCCHH-H----HHHHHHHSCTTCEEEECSCC
T ss_pred CCCCCEEEECCCCHH-H----HHHHHHHHhcCCEEEEEecC
Confidence 25899999987322 1 24567889999999998753
No 354
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=95.44 E-value=0.29 Score=45.35 Aligned_cols=115 Identities=14% Similarity=0.135 Sum_probs=72.8
Q ss_pred ccC-CCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 162 LLK-GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 162 ~l~-gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
.+. |++|++||= +++.++.+..+ ..||++|....|..-...+.+.+......+.. +.......++++.++++|+
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~---g~~~~~~~d~~eav~~aDv 217 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITA-AILGFEISIAMPKNYKISPEIWEFAMKQALIS---GAKISLGYDKFEALKDKDV 217 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHH---TCEEEEESCHHHHHTTCSE
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHH-HHcCCEEEEECCCccCCCHHHHHHHHHHHHHc---CCeEEEEcCHHHHhcCCCE
Confidence 477 999999996 57888888876 57999999988753111111111000000000 1123345799999999999
Q ss_pred EEEcCC--CCcc----------cccccCHhHHccCCCCcEEEecC---CCccCCHH
Q 019328 240 ISLHPV--LDKT----------TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (342)
Q Consensus 240 V~l~lp--lt~~----------t~~li~~~~l~~mk~gailIN~s---RG~~vd~~ 280 (342)
|..-.- ...+ ..--++.+.++.+||+++|.-+. ||.=|+.+
T Consensus 218 vyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~e 273 (307)
T 3tpf_A 218 VITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEE 273 (307)
T ss_dssp EEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred EEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 987651 1111 11336889999999999998875 67666544
No 355
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=95.43 E-value=0.37 Score=45.65 Aligned_cols=108 Identities=12% Similarity=0.099 Sum_probs=66.5
Q ss_pred cccCCCEEEEEccC--hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCC
Q 019328 161 NLLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 161 ~~l~gktvGIiG~G--~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sD 238 (342)
..+.|++|++||=| ++.++.+..+ ..||++|....|..-...+.+.+........ .+.......++++.++.+|
T Consensus 177 ~~l~gl~ia~vGD~~~~va~S~~~~~-~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~---~g~~v~~~~d~~eav~~aD 252 (358)
T 4h31_A 177 KALADIQFAYLGDARNNVGNSLMVGA-AKMGMDIRLVGPQAYWPDEELVAACQAIAKQ---TGGKITLTENVAEGVQGCD 252 (358)
T ss_dssp CCGGGCEEEEESCTTSHHHHHHHHHH-HHHTCEEEEESCGGGSCCHHHHHHHHHHHHH---HTCEEEEESCHHHHHTTCS
T ss_pred CCcCceEEEecCCCCcccchHHHHHH-HhcCceEEEeCCcccCCCHHHHHHHHHHHHH---cCCcceeccCHHHHhccCc
Confidence 46889999999954 7999999986 6899999999875311111111110000000 0112334578999999999
Q ss_pred EEEEcCCCC----ccc---------ccccCHhHHcc-CCCCcEEEecC
Q 019328 239 VISLHPVLD----KTT---------YHLINKERLAT-MKKEAILVNCS 272 (342)
Q Consensus 239 iV~l~lplt----~~t---------~~li~~~~l~~-mk~gailIN~s 272 (342)
+|..-.-.. ++. .--++.+.+++ .||+++|.-+.
T Consensus 253 vvyt~~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 253 FLYTDVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp EEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECS
T ss_pred EEEEEEEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCC
Confidence 998643211 111 12367788876 47888887653
No 356
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.43 E-value=0.057 Score=51.10 Aligned_cols=95 Identities=16% Similarity=0.060 Sum_probs=62.0
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccc--cCCHHHHhh-----
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (342)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.++++.+.. +..+++ ........ ..++.+.+.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~a~~lG-------a~~vi~~~~~~~~~~~~v~~~~~~ 264 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGC-KIAGASRIIAIDINGEKFP--KAKALG-------ATDCLNPRELDKPVQDVITELTAG 264 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCGGGHH--HHHHTT-------CSEEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHHH--HHHHhC-------CcEEEccccccchHHHHHHHHhCC
Confidence 578999999999999999985 89999 8999998776432 112222 11000001 023444332
Q ss_pred cCCEEEEcCCCCcccccccCHhHHccCCCC-cEEEecCC
Q 019328 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~~li~~~~l~~mk~g-ailIN~sR 273 (342)
..|+|+-++... ++ -...++.++++ ..++.++-
T Consensus 265 g~Dvvid~~G~~-~~----~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 265 GVDYSLDCAGTA-QT----LKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CBSEEEESSCCH-HH----HHHHHHTBCTTTCEEEECCC
T ss_pred CccEEEECCCCH-HH----HHHHHHHhhcCCCEEEEECC
Confidence 479999888632 22 24577888998 88888764
No 357
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.41 E-value=0.05 Score=51.45 Aligned_cols=95 Identities=15% Similarity=0.032 Sum_probs=62.2
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccc--cCCHHHHhh-----
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (342)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++..+.. +..+++ ........ ..++.+.+.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~a~~lG-------a~~vi~~~~~~~~~~~~i~~~t~g 260 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGC-KAAGASRIIGVGTHKDKFP--KAIELG-------ATECLNPKDYDKPIYEVICEKTNG 260 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCSEEEEECSCGGGHH--HHHHTT-------CSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEECCCHHHHH--HHHHcC-------CcEEEecccccchHHHHHHHHhCC
Confidence 478999999999999999985 78999 8999998765432 112222 11000001 023444332
Q ss_pred cCCEEEEcCCCCcccccccCHhHHccCCCC-cEEEecCC
Q 019328 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~~li~~~~l~~mk~g-ailIN~sR 273 (342)
..|+|+-++... ++ -...++.++++ ..++.++-
T Consensus 261 g~Dvvid~~g~~-~~----~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 261 GVDYAVECAGRI-ET----MMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CBSEEEECSCCH-HH----HHHHHHTBCTTTCEEEECCC
T ss_pred CCCEEEECCCCH-HH----HHHHHHHHhcCCCEEEEEcc
Confidence 479999988632 22 24577889998 88888864
No 358
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=95.41 E-value=0.031 Score=52.47 Aligned_cols=116 Identities=16% Similarity=0.238 Sum_probs=68.2
Q ss_pred CEEEEEccChHHHHHHHHHHhc--------CCcEEEE-EcCChhhH----HHHHHh-hhhhhhccCCCCCccccccCCHH
Q 019328 166 QTVGVIGAGRIGSAYARMMVEG--------FKMNLIY-YDLYQATR----LEKFVT-AYGQFLKANGEQPVTWKRASSMD 231 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a--------~g~~V~~-~d~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 231 (342)
.+|||+|+|.||+.+++.+.+. .+.+|.+ +|++.... ...+.. .+. .. ......+++
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~-----~~----~~~~~~d~~ 73 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRE-----TG----MLRDDAKAI 73 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHH-----HS----SCSBCCCHH
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhcc-----Cc----cccCCCCHH
Confidence 3799999999999999987433 6777664 56653211 000000 000 00 000023899
Q ss_pred HHhh--cCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccC-CHHHHHHHHHcCCc
Q 019328 232 EVLR--EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI-DEVALVEHLKQNPM 291 (342)
Q Consensus 232 ell~--~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~v-d~~aL~~aL~~g~i 291 (342)
++++ +.|+|+.|+|....+.. .-+-....++.|.-++...-+.+. +-+.|.++.++...
T Consensus 74 ~ll~~~~iDvVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~ 135 (327)
T 3do5_A 74 EVVRSADYDVLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGV 135 (327)
T ss_dssp HHHHHSCCSEEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTC
T ss_pred HHhcCCCCCEEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCC
Confidence 9986 48999999995432211 123346667888888776555543 45677777766554
No 359
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.39 E-value=0.046 Score=53.19 Aligned_cols=74 Identities=15% Similarity=0.203 Sum_probs=47.8
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccC----CHHHHhh--cCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS----SMDEVLR--EAD 238 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~ell~--~sD 238 (342)
.+|||||+|.||+..++.+.+.-++++. ++|+++... +.+.+.+. ..+... ...+. +++++++ +.|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~-~~~a~~~~----~~g~~~--~~~~~~~~~~~~~ll~~~~vD 93 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMV-GRAQEILK----KNGKKP--AKVFGNGNDDYKNMLKDKNID 93 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHH-HHHHHHHH----HTTCCC--CEEECSSTTTHHHHTTCTTCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHH-HHHHHHHH----hcCCCC--CceeccCCCCHHHHhcCCCCC
Confidence 5899999999999999987432377764 778887542 22211110 001000 12244 8999997 589
Q ss_pred EEEEcCCC
Q 019328 239 VISLHPVL 246 (342)
Q Consensus 239 iV~l~lpl 246 (342)
+|++++|.
T Consensus 94 ~V~i~tp~ 101 (444)
T 2ixa_A 94 AVFVSSPW 101 (444)
T ss_dssp EEEECCCG
T ss_pred EEEEcCCc
Confidence 99999993
No 360
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.36 E-value=0.015 Score=58.88 Aligned_cols=137 Identities=15% Similarity=0.191 Sum_probs=79.4
Q ss_pred ceEEcCCCC-CchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccc-cccCCCEEEEEccChHHHHHHHHHHhc
Q 019328 110 IAVGNTPGV-LTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVG-NLLKGQTVGVIGAGRIGSAYARMMVEG 187 (342)
Q Consensus 110 I~v~n~p~~-~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g-~~l~gktvGIiG~G~IG~~vA~~l~~a 187 (342)
-++.+-... .....||.+.-+-|-+.| |.-|.. .| ..|++++|.|||.|.+|..+|+.|+ .
T Consensus 285 ~~~~~l~~~~dp~~la~~~~~Lnlklm~-------------wRllp~---~g~ekL~~arVLIVGaGGLGs~vA~~La-~ 347 (615)
T 4gsl_A 285 PRVVDLSSLLDPLKIADQSVDLNLKLMK-------------WRILPD---LNLDIIKNTKVLLLGAGTLGCYVSRALI-A 347 (615)
T ss_dssp CEEEECHHHHCHHHHHHHHHHHHHHHHH-------------HHTCTT---CCHHHHHTCEEEEECCSHHHHHHHHHHH-H
T ss_pred eeEEeccccCCHHHHHhhhhhhhhHHHH-------------Hhhcch---hhHHHHhCCeEEEECCCHHHHHHHHHHH-H
Confidence 344443332 455677777666554442 222321 12 3699999999999999999999985 5
Q ss_pred CCc-EEEEEcCChh------------------hHHHHHHhhhhhhhccCCCCCcccc---------------------cc
Q 019328 188 FKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQPVTWK---------------------RA 227 (342)
Q Consensus 188 ~g~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~ 227 (342)
.|. ++..+|...- ...+...+.. +.-. ...... ..
T Consensus 348 aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L----~~iN-P~V~v~~~~~~Ipm~gh~v~~e~~~~l~~ 422 (615)
T 4gsl_A 348 WGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASL----KRIF-PLMDATGVKLSIPMIGHKLVNEEAQHKDF 422 (615)
T ss_dssp TTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHH----HHHC-TTCEEEEECCCCCCTTCCCSCHHHHHHHH
T ss_pred cCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHH----HhhC-CCcEEEEeeccccccCccccchhhhcCCH
Confidence 675 7888887531 0111111100 0000 000000 01
Q ss_pred CCHHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecC
Q 019328 228 SSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 228 ~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~s 272 (342)
.+++++++++|+|+.|+- +.+++.+++..-.+. +..+|+.+
T Consensus 423 ~~l~~ll~~~DlVvd~tD-n~~tR~~ln~~c~~~---~~PlI~aa 463 (615)
T 4gsl_A 423 DRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 463 (615)
T ss_dssp HHHHHHHHHCSEEEECCS-SGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred HHHHHHhhcCCEEEecCC-CHHHHHHHHHHHHHc---CCeEEEEE
Confidence 235678999999999876 677888888766543 34466654
No 361
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.34 E-value=0.019 Score=53.78 Aligned_cols=94 Identities=15% Similarity=0.086 Sum_probs=61.8
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-----cC
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~s 237 (342)
.|.+|.|+|.|.+|..+++.+ +.+|+ +|++.+++.++... ++.- ..........++.+.+. ..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~~Vi~~~~~~~~~~~---------~~~l-a~~v~~~~~~~~~~~~~~~~~~g~ 232 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVV-RASGAGPILVSDPNPYRLAF---------ARPY-ADRLVNPLEEDLLEVVRRVTGSGV 232 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHH-HHTTCCSEEEECSCHHHHGG---------GTTT-CSEEECTTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHHH---------HHHh-HHhccCcCccCHHHHHHHhcCCCC
Confidence 789999999999999999985 89999 99999987654211 1110 00000011124444333 57
Q ss_pred CEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
|+|+-++...+ + -...++.|+++..++.++.
T Consensus 233 D~vid~~g~~~-~----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 233 EVLLEFSGNEA-A----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEEEECSCCHH-H----HHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCCHH-H----HHHHHHHHhcCCEEEEEec
Confidence 99998887322 1 2456778888889988864
No 362
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=95.33 E-value=0.033 Score=51.91 Aligned_cols=69 Identities=16% Similarity=0.228 Sum_probs=44.1
Q ss_pred CEEEEEccChHHHHHHHHHHh-cCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-----cCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EAD 238 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~-a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~sD 238 (342)
.+|||||+|.||+.+++.+.+ .-++++. ++|+++......+.+.++ .. ....+.+++++ ..|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g----------~~-~~~~~~e~ll~~~~~~~iD 73 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMG----------VT-TTYAGVEGLIKLPEFADID 73 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTT----------CC-EESSHHHHHHHSGGGGGEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcC----------CC-cccCCHHHHHhccCCCCCc
Confidence 489999999999999998744 3467654 678775431112211221 00 11246677764 479
Q ss_pred EEEEcCC
Q 019328 239 VISLHPV 245 (342)
Q Consensus 239 iV~l~lp 245 (342)
+|+.++|
T Consensus 74 vV~~atp 80 (312)
T 1nvm_B 74 FVFDATS 80 (312)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9999999
No 363
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.33 E-value=0.016 Score=55.41 Aligned_cols=68 Identities=18% Similarity=0.218 Sum_probs=47.7
Q ss_pred CCEEEEEccChHHHHHHHHHHhcC--CcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGF--KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~--g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
-.+|||||.| +|+.-++.+ +.. ++++. ++|++... ..++.+.|+ ...+.++++++++.|+++
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~-~~~~~~~elvav~~~~~~~-a~~~a~~~g------------v~~~~~~~~l~~~~D~v~ 71 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAF-MQPPEGLELVGLLAQGSAR-SRELAHAFG------------IPLYTSPEQITGMPDIAC 71 (372)
T ss_dssp CEEEEEECST-TTHHHHHTT-SSCCTTEEEEEEECCSSHH-HHHHHHHTT------------CCEESSGGGCCSCCSEEE
T ss_pred CCEEEEEehH-HHHHHHHHH-HhCCCCeEEEEEECCCHHH-HHHHHHHhC------------CCEECCHHHHhcCCCEEE
Confidence 3589999999 799888875 444 57866 56887653 233333332 223578999999999999
Q ss_pred EcCCCC
Q 019328 242 LHPVLD 247 (342)
Q Consensus 242 l~lplt 247 (342)
+++|..
T Consensus 72 i~~p~~ 77 (372)
T 4gmf_A 72 IVVRST 77 (372)
T ss_dssp ECCC--
T ss_pred EECCCc
Confidence 999843
No 364
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.32 E-value=0.045 Score=51.73 Aligned_cols=95 Identities=18% Similarity=0.136 Sum_probs=62.5
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCc-cccc-cCCHHHHhh-----
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKR-ASSMDEVLR----- 235 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~l~ell~----- 235 (342)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.++++++... ..+++. ... .... ..++.+.+.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla-~~~Ga~~Vi~~~~~~~~~~~--~~~lGa-------~~vi~~~~~~~~~~~~v~~~~~~ 259 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGC-KVAGASRIIGVDINKDKFAR--AKEFGA-------TECINPQDFSKPIQEVLIEMTDG 259 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCSEEEEECSCGGGHHH--HHHHTC-------SEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHHHH--HHHcCC-------ceEeccccccccHHHHHHHHhCC
Confidence 578999999999999999985 78999 89999987654321 122221 000 0000 023444332
Q ss_pred cCCEEEEcCCCCcccccccCHhHHccCCCC-cEEEecCC
Q 019328 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~~li~~~~l~~mk~g-ailIN~sR 273 (342)
..|+|+-++...+ + -...++.++++ ..++.++-
T Consensus 260 g~D~vid~~g~~~-~----~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 260 GVDYSFECIGNVK-V----MRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CBSEEEECSCCHH-H----HHHHHHTBCTTTCEEEECSC
T ss_pred CCCEEEECCCcHH-H----HHHHHHhhccCCcEEEEEec
Confidence 4799999887322 2 24578889998 88888864
No 365
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.31 E-value=0.045 Score=51.06 Aligned_cols=115 Identities=15% Similarity=0.071 Sum_probs=67.8
Q ss_pred CCEEEEEccChHHHH-HHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh-hcCCEEEE
Q 019328 165 GQTVGVIGAGRIGSA-YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISL 242 (342)
Q Consensus 165 gktvGIiG~G~IG~~-vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~sDiV~l 242 (342)
.|+|.|||+|.+|.+ +|+.| +..|++|.++|....+...+. ++..+. ....-.+.+++. ..+|+|+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L-~~~G~~V~~~D~~~~~~~~~~-------L~~~gi---~v~~g~~~~~l~~~~~d~vV~ 72 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIA-KEAGFEVSGCDAKMYPPMSTQ-------LEALGI---DVYEGFDAAQLDEFKADVYVI 72 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHH-HHTTCEEEEEESSCCTTHHHH-------HHHTTC---EEEESCCGGGGGSCCCSEEEE
T ss_pred CcEEEEEEECHHHHHHHHHHH-HhCCCEEEEEcCCCCcHHHHH-------HHhCCC---EEECCCCHHHcCCCCCCEEEE
Confidence 478999999999996 88887 689999999998753211111 111111 111112344555 57999998
Q ss_pred c--CCC-Ccccc-------cccCH-hHHcc-C-CCC-cEEEecCCCccCCHHHHHHHHHcCC
Q 019328 243 H--PVL-DKTTY-------HLINK-ERLAT-M-KKE-AILVNCSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 243 ~--lpl-t~~t~-------~li~~-~~l~~-m-k~g-ailIN~sRG~~vd~~aL~~aL~~g~ 290 (342)
. +|. +|+.. .++++ +.|.. + +.. .+-|-=+.|..--..-+...|+...
T Consensus 73 Spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g 134 (326)
T 3eag_A 73 GNVAKRGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAG 134 (326)
T ss_dssp CTTCCTTCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCCcCCCCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 6 432 22211 23433 33443 3 332 3445446788777777777887643
No 366
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=95.30 E-value=0.018 Score=46.26 Aligned_cols=99 Identities=15% Similarity=0.121 Sum_probs=65.0
Q ss_pred CEEEEEcc----ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 166 QTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 166 ktvGIiG~----G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
++++|||. |..|..+.+.| +..|.+|+..+|....- .+...+.+++++-. -|+++
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L-~~~g~~V~pVnP~~~~i-------------------~G~~~y~sl~dlp~-vDlav 63 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERL-KSHGHEFIPVGRKKGEV-------------------LGKTIINERPVIEG-VDTVT 63 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHH-HHHTCCEEEESSSCSEE-------------------TTEECBCSCCCCTT-CCEEE
T ss_pred CEEEEEccCCCCCCHHHHHHHHH-HHCCCeEEEECCCCCcC-------------------CCeeccCChHHCCC-CCEEE
Confidence 67999998 67999999998 57788999999864321 11223567777777 89999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
+++|- +.+..++.+ .. .+...+++++.+- .++++.+..++..+.
T Consensus 64 i~~p~-~~v~~~v~e-~~-~~g~k~v~~~~G~----~~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 64 LYINP-QNQLSEYNY-IL-SLKPKRVIFNPGT----ENEELEEILSENGIE 107 (122)
T ss_dssp ECSCH-HHHGGGHHH-HH-HHCCSEEEECTTC----CCHHHHHHHHHTTCE
T ss_pred EEeCH-HHHHHHHHH-HH-hcCCCEEEECCCC----ChHHHHHHHHHcCCe
Confidence 99992 334444432 22 2344467665432 345666666665554
No 367
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.29 E-value=0.0099 Score=56.41 Aligned_cols=102 Identities=14% Similarity=0.183 Sum_probs=51.8
Q ss_pred CEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhcc---CCCCCccccccCCHHHHhh-cCCEE
Q 019328 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA---NGEQPVTWKRASSMDEVLR-EADVI 240 (342)
Q Consensus 166 ktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ell~-~sDiV 240 (342)
.+|||+| +|.||+.+++.|...-+++|.+..++.......+.+.++..... .+...... ...+++++++ .+|+|
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~DvV 87 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVV-IPTDPKHEEFEDVDIV 87 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBC-EESCTTSGGGTTCCEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEE-EeCCHHHHhcCCCCEE
Confidence 5899999 99999999999743334687766322111000010001100000 00000111 1124555556 89999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
++|+|... ++.. -... ++.|..+|+.+-
T Consensus 88 ~~atp~~~-~~~~-a~~~---~~aG~~VId~s~ 115 (354)
T 1ys4_A 88 FSALPSDL-AKKF-EPEF---AKEGKLIFSNAS 115 (354)
T ss_dssp EECCCHHH-HHHH-HHHH---HHTTCEEEECCS
T ss_pred EECCCchH-HHHH-HHHH---HHCCCEEEECCc
Confidence 99999332 1111 1122 356788888764
No 368
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=95.29 E-value=0.035 Score=52.21 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=26.3
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEEcCC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLY 198 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~ 198 (342)
.+|||+|+|.||+.+.|.+...-.++|.+.+-.
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~ 34 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL 34 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 379999999999999998754456888766543
No 369
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.26 E-value=0.067 Score=45.79 Aligned_cols=97 Identities=10% Similarity=0.063 Sum_probs=58.0
Q ss_pred CEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCcccc-ccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK-RASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ell~~sDiV~l~ 243 (342)
++|.|.| .|.||+.+++.| ..-|.+|++.+|++..... . . .+....... ...+. +.+..+|+|+.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~-~--------~-~~~~~~~~D~~d~~~-~~~~~~d~vi~~ 68 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEA-KNRGHEVTAIVRNAGKITQ-T--------H-KDINILQKDIFDLTL-SDLSDQNVVVDA 68 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESCSHHHHH-H--------C-SSSEEEECCGGGCCH-HHHTTCSEEEEC
T ss_pred CeEEEEcCCchhHHHHHHHH-HhCCCEEEEEEcCchhhhh-c--------c-CCCeEEeccccChhh-hhhcCCCEEEEC
Confidence 3789999 599999999998 4779999999998754211 0 0 010000000 01112 678899999999
Q ss_pred CCCCcccccc---cCHhHHccCCC--CcEEEecCCC
Q 019328 244 PVLDKTTYHL---INKERLATMKK--EAILVNCSRG 274 (342)
Q Consensus 244 lplt~~t~~l---i~~~~l~~mk~--gailIN~sRG 274 (342)
...+...... .....++.|+. ...+|++|..
T Consensus 69 ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 69 YGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp CCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred CcCCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 8754432211 11345555543 3567777654
No 370
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.26 E-value=0.083 Score=50.04 Aligned_cols=105 Identities=16% Similarity=0.230 Sum_probs=59.1
Q ss_pred CCEEEEEc-cChHHHHHHHHHHhcCC------cEEEEEc-CC-hhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh
Q 019328 165 GQTVGVIG-AGRIGSAYARMMVEGFK------MNLIYYD-LY-QATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR 235 (342)
Q Consensus 165 gktvGIiG-~G~IG~~vA~~l~~a~g------~~V~~~d-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~ 235 (342)
..+|+|+| .|.+|+.+.++|. ..+ .++..+. ++ ..+.... .+.. +. +........ .+.+ .++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~-~~~~~~~~~~ei~~l~s~~~agk~~~~---~~~~-l~--~~~~~~~~~-~~~~-~~~ 79 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLL-GHPAYADGRLRIGALTAATSAGSTLGE---HHPH-LT--PLAHRVVEP-TEAA-VLG 79 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHH-TCHHHHTTSEEEEEEEESSCTTSBGGG---TCTT-CG--GGTTCBCEE-CCHH-HHT
T ss_pred CCEEEEECCCCHHHHHHHHHHH-cCCCCCCccEEEEEEECCCcCCCchhh---hccc-cc--ccceeeecc-CCHH-Hhc
Confidence 36899999 9999999999974 444 5666654 22 1111100 0000 00 000111111 2333 356
Q ss_pred cCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHH
Q 019328 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVE 284 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~ 284 (342)
.+|+|++|+|... ..+....++.|+.+|+.|.---.+..+.++
T Consensus 80 ~~DvVf~alg~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~~~~ 122 (352)
T 2nqt_A 80 GHDAVFLALPHGH------SAVLAQQLSPETLIIDCGADFRLTDAAVWE 122 (352)
T ss_dssp TCSEEEECCTTSC------CHHHHHHSCTTSEEEECSSTTTCSCHHHHH
T ss_pred CCCEEEECCCCcc------hHHHHHHHhCCCEEEEECCCccCCcchhhh
Confidence 8999999999553 344444446789999987655444444443
No 371
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.25 E-value=0.087 Score=44.44 Aligned_cols=73 Identities=11% Similarity=0.052 Sum_probs=48.1
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc--cccccCCHHHHhhcCCEEE
Q 019328 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVIS 241 (342)
Q Consensus 165 gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~sDiV~ 241 (342)
++++.|.|. |.||+.+++.| ..-|.+|++.+|++..... ....+.... ......++.++++.+|+|+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l-~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 72 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQA-VQAGYEVTVLVRDSSRLPS---------EGPRPAHVVVGDVLQAADVDKTVAGQDAVI 72 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHH-HHTTCEEEEEESCGGGSCS---------SSCCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHH-HHCCCeEEEEEeChhhccc---------ccCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 479999998 99999999998 4678999999998653110 000000000 0011235667888999999
Q ss_pred EcCCCC
Q 019328 242 LHPVLD 247 (342)
Q Consensus 242 l~lplt 247 (342)
.+....
T Consensus 73 ~~a~~~ 78 (206)
T 1hdo_A 73 VLLGTR 78 (206)
T ss_dssp ECCCCT
T ss_pred ECccCC
Confidence 887644
No 372
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.25 E-value=0.074 Score=49.97 Aligned_cols=107 Identities=11% Similarity=0.109 Sum_probs=61.7
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
....++|+|||.|.||..+|..++ ..|. ++..+|...... +...........-.. ........+.+ .++.||+
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~-~~~~~~el~L~Di~~~~~-~g~a~DL~~~~~~~~--~~~i~~~~d~~-~~~~aDi 90 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISIL-MKDLADELALVDVIEDKL-KGEMMDLQHGSLFLK--TPKIVSSKDYS-VTANSKL 90 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSCHHHH-HHHHHHHHHTGGGCS--CCEEEECSSGG-GGTTEEE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHH-hCCCCceEEEEeCChHHH-HHHHHhhhhhhhccC--CCeEEEcCCHH-HhCCCCE
Confidence 456789999999999999998865 3354 899999976432 111111110000000 01111223555 4899999
Q ss_pred EEEcCCC--Cc-cccc-ccC--H-------hHHccCCCCcEEEecCC
Q 019328 240 ISLHPVL--DK-TTYH-LIN--K-------ERLATMKKEAILVNCSR 273 (342)
Q Consensus 240 V~l~lpl--t~-~t~~-li~--~-------~~l~~mk~gailIN~sR 273 (342)
|+++.-. .| .||. ++. . +.+....|++++++++-
T Consensus 91 Vvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 91 VIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 9998532 22 2332 221 1 23344578999999984
No 373
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.25 E-value=0.019 Score=52.70 Aligned_cols=93 Identities=16% Similarity=0.111 Sum_probs=60.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCcccccc-CCHHHHhhcCCEEE
Q 019328 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA-SSMDEVLREADVIS 241 (342)
Q Consensus 164 ~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~ell~~sDiV~ 241 (342)
.|++|.|+|. |.||..+++.+ +.+|++|++.+++..+... ...++ ......... .++.+.+...|+|+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~--~~~~g-------a~~~~~~~~~~~~~~~~~~~d~vi 194 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVA-RAMGLRVLAAASRPEKLAL--PLALG-------AEEAATYAEVPERAKAWGGLDLVL 194 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHTTCEEEEEESSGGGSHH--HHHTT-------CSEEEEGGGHHHHHHHTTSEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH--HHhcC-------CCEEEECCcchhHHHHhcCceEEE
Confidence 4789999998 99999999985 7899999999987654221 11111 110000011 12333346789999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
. +.. + .-...++.|+++..++.++-
T Consensus 195 d-~g~-~-----~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 195 E-VRG-K-----EVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp E-CSC-T-----THHHHHTTEEEEEEEEEC--
T ss_pred E-CCH-H-----HHHHHHHhhccCCEEEEEeC
Confidence 8 763 2 23567888999999998864
No 374
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.24 E-value=0.029 Score=52.49 Aligned_cols=96 Identities=13% Similarity=0.134 Sum_probs=62.8
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc-cccccCCHHHHhh-----c
Q 019328 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSMDEVLR-----E 236 (342)
Q Consensus 164 ~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ell~-----~ 236 (342)
.|++|.|+|. |.||+.+++.+ +..|++|++.+++..... ....++ .... ......++.+.+. .
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a-~~~Ga~V~~~~~~~~~~~--~~~~~g-------~~~~~d~~~~~~~~~~~~~~~~~~ 238 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYA-KAMGYRVLGIDGGEGKEE--LFRSIG-------GEVFIDFTKEKDIVGAVLKATDGG 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEECSTTHHH--HHHHTT-------CCEEEETTTCSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCCcEEEEcCCHHHHH--HHHHcC-------CceEEecCccHhHHHHHHHHhCCC
Confidence 4789999999 89999999986 789999999998765431 111111 1000 0011234544443 4
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
.|+|+.+....+ .-...++.|+++..+|+++..
T Consensus 239 ~D~vi~~~g~~~-----~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 239 AHGVINVSVSEA-----AIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp EEEEEECSSCHH-----HHHHHTTSEEEEEEEEECCCC
T ss_pred CCEEEECCCcHH-----HHHHHHHHHhcCCEEEEEeCC
Confidence 799998876322 124567888999999998753
No 375
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.23 E-value=0.026 Score=53.59 Aligned_cols=95 Identities=19% Similarity=0.176 Sum_probs=61.8
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-------
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------- 235 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------- 235 (342)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.++++++.. +...++. .........++.+.+.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~a~~lGa-------~~vi~~~~~~~~~~i~~~~~~~~ 251 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLA-RLAGATTVILSTRQATKRR--LAEEVGA-------TATVDPSAGDVVEAIAGPVGLVP 251 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCHHHHH--HHHHHTC-------SEEECTTSSCHHHHHHSTTSSST
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--HHHHcCC-------CEEECCCCcCHHHHHHhhhhccC
Confidence 478999999999999999985 89999 8999998875432 2222221 1111111234444443
Q ss_pred -cCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 236 -EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 236 -~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
..|+|+-++... ++ -...++.++++..++.++-
T Consensus 252 gg~Dvvid~~G~~-~~----~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 252 GGVDVVIECAGVA-ET----VKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TCEEEEEECSCCH-HH----HHHHHHHEEEEEEEEECSC
T ss_pred CCCCEEEECCCCH-HH----HHHHHHHhccCCEEEEEec
Confidence 379999887632 21 2456777888888888764
No 376
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.23 E-value=0.038 Score=52.00 Aligned_cols=95 Identities=17% Similarity=0.165 Sum_probs=61.9
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCcccccc----CCH-HHHh---
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA----SSM-DEVL--- 234 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l-~ell--- 234 (342)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++..+.. +..+++ ... ..... .++ +++.
T Consensus 171 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~a~~lG-------a~~-vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVA-KAMGAAQVVVTDLSATRLS--KAKEIG-------ADL-VLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEESCHHHHH--HHHHTT-------CSE-EEECSSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--HHHHhC-------CCE-EEcCcccccchHHHHHHHHh
Confidence 478999999999999999985 89999 9999998765421 112222 110 00000 111 1222
Q ss_pred -hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 235 -READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 235 -~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
...|+|+-++.... + -...++.++++..++.++-+
T Consensus 240 ~~g~D~vid~~g~~~-~----~~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 240 GCKPEVTIECTGAEA-S----IQAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp TSCCSEEEECSCCHH-H----HHHHHHHSCTTCEEEECSCC
T ss_pred CCCCCEEEECCCChH-H----HHHHHHHhcCCCEEEEEecC
Confidence 25899999987322 1 24567889999999998753
No 377
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=95.22 E-value=0.041 Score=50.67 Aligned_cols=98 Identities=11% Similarity=0.076 Sum_probs=58.3
Q ss_pred CEEEEEc-cChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG-~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
.+|+|+| +|+||+.+++.+...-++++. ++|+....... ...++ -.+....+.....++++++..+|+|+-+
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G---~d~ge---l~G~~~~gv~v~~dl~~ll~~aDVvIDF 95 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVD---KDASI---LIGSDFLGVRITDDPESAFSNTEGILDF 95 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTT---SBGGG---GTTCSCCSCBCBSCHHHHTTSCSEEEEC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc---cchHH---hhccCcCCceeeCCHHHHhcCCCEEEEc
Confidence 5899999 999999999987555688866 55776422100 00000 0111123334457999999999999977
Q ss_pred CCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 244 lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
.+ |+.. .+.....++.|.-+|-...|
T Consensus 96 T~--p~a~---~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 96 SQ--PQAS---VLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp SC--HHHH---HHHHHHHHHHTCEEEECCCC
T ss_pred CC--HHHH---HHHHHHHHHcCCCEEEECCC
Confidence 65 3321 11122234556666655566
No 378
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.21 E-value=0.023 Score=52.30 Aligned_cols=101 Identities=22% Similarity=0.206 Sum_probs=57.9
Q ss_pred CEEEEEccChHHHHHHHHHHh---cCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCE
Q 019328 166 QTVGVIGAGRIGSAYARMMVE---GFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~---a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDi 239 (342)
.+|||||+|.||+..++.+.+ .-++++. ++|++... +. .+.. +.+++++++ +.|+
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a------~~------------~g~~-~~~~~ell~~~~vD~ 68 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG------SL------------DEVR-QISLEDALRSQEIDV 68 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC------EE------------TTEE-BCCHHHHHHCSSEEE
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHH------HH------------cCCC-CCCHHHHhcCCCCCE
Confidence 489999999999999988632 2367766 56664211 00 0111 368999997 6799
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCc-EEEecC-CCccCCHHHHHHHHHcCC
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEA-ILVNCS-RGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~ga-ilIN~s-RG~~vd~~aL~~aL~~g~ 290 (342)
|++++|. .++.-+ ..+.++.|. +++.-- --.+-+.+.|.++.++..
T Consensus 69 V~i~tp~--~~H~~~---~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g 116 (294)
T 1lc0_A 69 AYICSES--SSHEDY---IRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKG 116 (294)
T ss_dssp EEECSCG--GGHHHH---HHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTT
T ss_pred EEEeCCc--HhHHHH---HHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 9999993 333212 223333443 455421 112223355666555443
No 379
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.20 E-value=0.026 Score=53.21 Aligned_cols=94 Identities=16% Similarity=0.203 Sum_probs=61.8
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCC---HHHHhhcCCEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVLREADVI 240 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell~~sDiV 240 (342)
.|.+|.|+|.|.||...++.+ +.+|++|++.+++..+.... ...++ .... ....+ +.++....|+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qla-k~~Ga~Vi~~~~~~~~~~~~-~~~lG-------a~~v--i~~~~~~~~~~~~~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIA-KAMGHHVTVISSSNKKREEA-LQDLG-------ADDY--VIGSDQAKMSELADSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCEEEEEESSTTHHHHH-HTTSC-------CSCE--EETTCHHHHHHSTTTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEeCChHHHHHH-HHHcC-------Ccee--eccccHHHHHHhcCCCCEE
Confidence 588999999999999999985 78999999999886543211 10111 1110 01112 22333457999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
+-++.... .-...++.++++..++.++-
T Consensus 249 id~~g~~~-----~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 249 IDTVPVHH-----ALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp EECCCSCC-----CSHHHHTTEEEEEEEEECSC
T ss_pred EECCCChH-----HHHHHHHHhccCCEEEEeCC
Confidence 99887432 12456788899999988864
No 380
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.19 E-value=0.018 Score=53.52 Aligned_cols=102 Identities=19% Similarity=0.295 Sum_probs=57.5
Q ss_pred EEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 019328 167 TVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (342)
Q Consensus 167 tvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lp 245 (342)
+|+|||.|.+|..+|..++. .|. +|..+|...+.. +.............. .........+. +.++.||+|+++.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~-~~l~el~L~Di~~~~~-~g~~~dl~~~~~~~~-~~~~i~~t~d~-~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM-RGYDDLLLIARTPGKP-QGEALDLAHAAAELG-VDIRISGSNSY-EDMRGSDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH-HTCSCEEEECSSTTHH-HHHHHHHHHHHHHHT-CCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHh-CCCCEEEEEcCChhhH-HHHHHHHHHhhhhcC-CCeEEEECCCH-HHhCCCCEEEEeCC
Confidence 58999999999999988753 244 699999986432 221111111000000 01111122455 57899999999966
Q ss_pred CCcccccc-----c--C----H---hHHccCCCCcEEEecCC
Q 019328 246 LDKTTYHL-----I--N----K---ERLATMKKEAILVNCSR 273 (342)
Q Consensus 246 lt~~t~~l-----i--~----~---~~l~~mk~gailIN~sR 273 (342)
... ..++ + | . +.+....|++++|+++-
T Consensus 77 ~~~-k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 77 IGR-KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp CCC-CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCC-CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 432 2222 0 1 1 12333358999999855
No 381
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=95.19 E-value=0.15 Score=47.69 Aligned_cols=117 Identities=16% Similarity=0.180 Sum_probs=72.2
Q ss_pred cccCCCEEEEEccC--hHHHHHHHHHHhcCCcEEEEEcCChhh--HHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc
Q 019328 161 NLLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQAT--RLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (342)
Q Consensus 161 ~~l~gktvGIiG~G--~IG~~vA~~l~~a~g~~V~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (342)
..+.|++|++||=| ++.++.+..+ ..||++|.+..|..-. ..+...+......+..+ .+.......++++.+++
T Consensus 157 ~~l~gl~va~vGD~~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~-~g~~v~~~~d~~eav~~ 234 (328)
T 3grf_A 157 NGFKGIKFAYCGDSMNNVTYDLMRGC-ALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHG-TGGSIKIFHDCKKGCEG 234 (328)
T ss_dssp TTGGGCCEEEESCCSSHHHHHHHHHH-HHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHT-CCCEEEEESSHHHHHTT
T ss_pred cccCCcEEEEeCCCCcchHHHHHHHH-HHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhcc-CCCeEEEEcCHHHHhcC
Confidence 36899999999986 8888888886 5899999998875321 11111111000000000 01123345799999999
Q ss_pred CCEEEEcC----CCCcc---------cccccCHhHHccCCCCcEEEecC---CCccCCH
Q 019328 237 ADVISLHP----VLDKT---------TYHLINKERLATMKKEAILVNCS---RGPVIDE 279 (342)
Q Consensus 237 sDiV~l~l----plt~~---------t~~li~~~~l~~mk~gailIN~s---RG~~vd~ 279 (342)
+|+|..-+ -..++ ..--++.+.++.+|++++|.-+. ||.=|+.
T Consensus 235 aDvvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~lPa~Rg~EI~~ 293 (328)
T 3grf_A 235 VDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTA 293 (328)
T ss_dssp CSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCH
T ss_pred CCEEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCCCCCCCCccCH
Confidence 99998642 21111 11336889999999999998774 5654443
No 382
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=95.17 E-value=0.082 Score=48.26 Aligned_cols=38 Identities=24% Similarity=0.127 Sum_probs=33.4
Q ss_pred cccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCCh
Q 019328 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (342)
Q Consensus 161 ~~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~ 199 (342)
..+.||++-|.|- |.||+.+|+.|+ ..|++|+..+++.
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~ 83 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYA-REGADVAINYLPA 83 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECCGG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCc
Confidence 4689999999997 899999999984 7899999998874
No 383
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.16 E-value=0.13 Score=50.77 Aligned_cols=109 Identities=13% Similarity=0.098 Sum_probs=68.2
Q ss_pred ccccCCCEEEEEccC----------hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhh---hccCCCCCccccc
Q 019328 160 GNLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQF---LKANGEQPVTWKR 226 (342)
Q Consensus 160 g~~l~gktvGIiG~G----------~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 226 (342)
+..+.|++|+|+|+- .=...+++.| ...|++|.+|||........ .|+.. +.... . ....
T Consensus 323 ~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L-~~~g~~v~~~DP~~~~~~~~---~~~~~~~~~~~~~-~--~~~~ 395 (478)
T 2y0c_A 323 GEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAEL-LSRGARIAAYDPVAQEEARR---VIALDLADHPSWL-E--RLSF 395 (478)
T ss_dssp CSCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHH-HHTTCEEEEECTTTHHHHHH---HHHHHTTTCHHHH-T--TEEE
T ss_pred cccCCCCEEEEEecccCCCCCccccChHHHHHHHH-HHCCCEEEEECCCccHHHHH---hhccccccccccc-c--ceee
Confidence 346899999999984 2457888987 68999999999986432111 11100 00000 0 0122
Q ss_pred cCCHHHHhhcCCEEEEcCCCCcccccccCHhHH-ccCCCCcEEEecCCCccCCHH
Q 019328 227 ASSMDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGPVIDEV 280 (342)
Q Consensus 227 ~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l-~~mk~gailIN~sRG~~vd~~ 280 (342)
..++++.++.||.|+++..- ++-+. ++-+.+ +.|+ +.+++++ |+ +.|.+
T Consensus 396 ~~~~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~-~~~i~D~-r~-~~~~~ 445 (478)
T 2y0c_A 396 VDDEAQAARDADALVIVTEW-KIFKS-PDFVALGRLWK-TPVIFDG-RN-LYEPE 445 (478)
T ss_dssp CSSHHHHTTTCSEEEECSCC-GGGGS-CCHHHHHTTCS-SCEEEES-SC-CSCHH
T ss_pred cCCHHHHHhCCCEEEEecCC-hHhhc-cCHHHHHhhcC-CCEEEEC-CC-CCCHH
Confidence 45788999999999999884 33333 344444 4566 4788887 44 34554
No 384
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=95.14 E-value=0.23 Score=46.04 Aligned_cols=75 Identities=16% Similarity=0.326 Sum_probs=50.7
Q ss_pred ccCCCEEEEEcc---ChHHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcC
Q 019328 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (342)
Q Consensus 162 ~l~gktvGIiG~---G~IG~~vA~~l~~a~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~s 237 (342)
.+.|+||++||= |++.++.+..+ ..| |++|.+..|..-...+...+. .+.. +.......++++.++++
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~-~~~~G~~v~~~~P~~~~~~~~~~~~----~~~~---g~~~~~~~d~~eav~~a 219 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYAL-SLFENVEMYFVSPKELRLPKDIIED----LKAK---NIKFYEKESLDDLDDDI 219 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHH-HTSSSCEEEEECCGGGCCCHHHHHH----HHHT---TCCEEEESCGGGCCTTC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHH-HhcCCCEEEEECCcccccCHHHHHH----HHHc---CCEEEEEcCHHHHhcCC
Confidence 478999999997 58999999987 689 999999887532111111111 1111 11223357899999999
Q ss_pred CEEEEcC
Q 019328 238 DVISLHP 244 (342)
Q Consensus 238 DiV~l~l 244 (342)
|+|..-.
T Consensus 220 Dvvy~~~ 226 (306)
T 4ekn_B 220 DVLYVTR 226 (306)
T ss_dssp SEEEECC
T ss_pred CEEEeCC
Confidence 9998753
No 385
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.12 E-value=0.11 Score=50.86 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=66.6
Q ss_pred ccCCCEEEEEccCh----------HHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCC-CC----ccccc
Q 019328 162 LLKGQTVGVIGAGR----------IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-QP----VTWKR 226 (342)
Q Consensus 162 ~l~gktvGIiG~G~----------IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~ 226 (342)
.+.|++|+|+|+-- -...+++.| ...|++|.+|||....... ...+. .... .+ .....
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L-~~~g~~v~~~DP~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~ 398 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYL-MDEGAHLHIYDPKVPREQI--VVDLS----HPGVSEDDQVSRLVTI 398 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSSCHHHH--HHHHC----C------CHHHHHEEE
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHH-HHCCCEEEEEcCccCHHHH--hhhhc----cccccccccccCceee
Confidence 48899999999974 678899997 6899999999998543210 00010 0000 00 01122
Q ss_pred cCCHHHHhhcCCEEEEcCCCCcccccccCHhH-HccCCCCcEEEecCCCc
Q 019328 227 ASSMDEVLREADVISLHPVLDKTTYHLINKER-LATMKKEAILVNCSRGP 275 (342)
Q Consensus 227 ~~~l~ell~~sDiV~l~lplt~~t~~li~~~~-l~~mk~gailIN~sRG~ 275 (342)
..++.+.++.+|.|++++.- ++-+. ++.+. .+.|+...+++++ |+-
T Consensus 399 ~~~~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~~ 445 (467)
T 2q3e_A 399 SKDPYEACDGAHAVVICTEW-DMFKE-LDYERIHKKMLKPAFIFDG-RRV 445 (467)
T ss_dssp CSSHHHHHTTCSEEEECSCC-GGGGG-SCHHHHHHHSCSSCEEEES-SCT
T ss_pred cCCHHHHHhCCcEEEEecCC-hhhhc-CCHHHHHHhcCCCCEEEeC-CCc
Confidence 35788899999999999884 34443 35444 4567776668876 553
No 386
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.11 E-value=0.088 Score=45.27 Aligned_cols=98 Identities=13% Similarity=0.099 Sum_probs=57.9
Q ss_pred CEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccc-cccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTW-KRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ell~~sDiV~l~ 243 (342)
++|.|.|. |.||+.+++.| ..-|.+|++.+|+....... ...+...... ....+. +.+..+|+|+.+
T Consensus 1 MkilVtGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ 69 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEA-RRRGHEVLAVVRDPQKAADR---------LGATVATLVKEPLVLTE-ADLDSVDAVVDA 69 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESCHHHHHHH---------TCTTSEEEECCGGGCCH-HHHTTCSEEEEC
T ss_pred CEEEEEcCCCHHHHHHHHHH-HHCCCEEEEEEecccccccc---------cCCCceEEecccccccH-hhcccCCEEEEC
Confidence 36899997 99999999998 46799999999987542210 0001000000 001112 678899999988
Q ss_pred CCCC--cccc--cc-cCHhHHccCC-CCcEEEecCCC
Q 019328 244 PVLD--KTTY--HL-INKERLATMK-KEAILVNCSRG 274 (342)
Q Consensus 244 lplt--~~t~--~l-i~~~~l~~mk-~gailIN~sRG 274 (342)
.... +... ++ .....++.|+ .|..+|++|..
T Consensus 70 ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 70 LSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp CCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred CccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 7653 1110 11 1234566664 34678888653
No 387
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.10 E-value=0.033 Score=52.46 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=44.5
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEE-cCChhhHHHHHHhh-hhhhhccCCCC-C---ccccccCCHHHHhhcCCE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYY-DLYQATRLEKFVTA-YGQFLKANGEQ-P---VTWKRASSMDEVLREADV 239 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~-d~~~~~~~~~~~~~-~~~~~~~~~~~-~---~~~~~~~~l~ell~~sDi 239 (342)
.+|||+|+|.||+.+++.|...-++++.+. |+.+.......... +..+..-.+.. . .......+.++++..+|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 379999999999999998754357887654 55432111000000 00000000000 0 000001257788889999
Q ss_pred EEEcCCCC
Q 019328 240 ISLHPVLD 247 (342)
Q Consensus 240 V~l~lplt 247 (342)
|+.|+|..
T Consensus 82 V~~atp~~ 89 (337)
T 1cf2_P 82 VIDCTPEG 89 (337)
T ss_dssp EEECCSTT
T ss_pred EEECCCch
Confidence 99999944
No 388
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=95.09 E-value=0.019 Score=53.66 Aligned_cols=71 Identities=15% Similarity=0.113 Sum_probs=45.1
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc--CCEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVISL 242 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--sDiV~l 242 (342)
.++||||+|.+|+..++.+ .-++++. ++|+++....+.+.+.+ +. .+.....+.+++++++. .|+|++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~ll~~~~vD~V~I 73 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAI----SE---MNIKPKKYNNWWEMLEKEKPDILVI 73 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHH----HT---TTCCCEECSSHHHHHHHHCCSEEEE
T ss_pred eEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHH----HH---cCCCCcccCCHHHHhcCCCCCEEEE
Confidence 4899999999999776654 4577876 57877531111111100 00 01112346799999975 899999
Q ss_pred cCC
Q 019328 243 HPV 245 (342)
Q Consensus 243 ~lp 245 (342)
+.|
T Consensus 74 ~tp 76 (337)
T 3ip3_A 74 NTV 76 (337)
T ss_dssp CSS
T ss_pred eCC
Confidence 998
No 389
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=95.07 E-value=0.059 Score=48.66 Aligned_cols=40 Identities=25% Similarity=0.170 Sum_probs=33.4
Q ss_pred cccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhh
Q 019328 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (342)
Q Consensus 161 ~~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~ 201 (342)
..+.||++-|.|- |.||+.+|+.|+ .-|++|+..+++...
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~ 67 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLA-LEGAAVALTYVNAAE 67 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCCHH
Confidence 3689999999997 789999999985 789999988665433
No 390
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.06 E-value=0.056 Score=53.32 Aligned_cols=70 Identities=10% Similarity=0.171 Sum_probs=49.1
Q ss_pred CCEEEEEcc----ChHHHHHHHHHHhcC--CcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--
Q 019328 165 GQTVGVIGA----GRIGSAYARMMVEGF--KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-- 235 (342)
Q Consensus 165 gktvGIiG~----G~IG~~vA~~l~~a~--g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-- 235 (342)
-.+|||||+ |.||+..++.+. .. ++++. ++|+++... +.+.+.++ .. ....+.+++++++
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~-~~~~~~~lvav~d~~~~~a-~~~a~~~g-------~~--~~~~~~d~~ell~~~ 107 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQ-QLSSQFQIVALYNPTLKSS-LQTIEQLQ-------LK--HATGFDSLESFAQYK 107 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHH-HTTTTEEEEEEECSCHHHH-HHHHHHTT-------CT--TCEEESCHHHHHHCT
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHH-hcCCCeEEEEEEeCCHHHH-HHHHHHcC-------CC--cceeeCCHHHHhcCC
Confidence 358999999 999999999874 54 78865 788886532 22222221 11 0123578999996
Q ss_pred cCCEEEEcCC
Q 019328 236 EADVISLHPV 245 (342)
Q Consensus 236 ~sDiV~l~lp 245 (342)
+.|+|++++|
T Consensus 108 ~vD~V~I~tp 117 (479)
T 2nvw_A 108 DIDMIVVSVK 117 (479)
T ss_dssp TCSEEEECSC
T ss_pred CCCEEEEcCC
Confidence 6899999999
No 391
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=95.05 E-value=0.041 Score=51.82 Aligned_cols=30 Identities=23% Similarity=0.443 Sum_probs=23.4
Q ss_pred EEEEEccChHHHHHHHHHHhc--CCcEEEEEc
Q 019328 167 TVGVIGAGRIGSAYARMMVEG--FKMNLIYYD 196 (342)
Q Consensus 167 tvGIiG~G~IG~~vA~~l~~a--~g~~V~~~d 196 (342)
+|||+|+|.||+.+.|.|... -.++|.+.+
T Consensus 3 kVgInG~G~IGr~llR~l~~~~~p~~eivaIn 34 (337)
T 1rm4_O 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVIN 34 (337)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSCSEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEEE
Confidence 799999999999999987432 246776544
No 392
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=95.00 E-value=0.063 Score=52.47 Aligned_cols=121 Identities=16% Similarity=0.124 Sum_probs=64.6
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhh-hh-h-hccC-CC--C-----CccccccCCHHHH
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAY-GQ-F-LKAN-GE--Q-----PVTWKRASSMDEV 233 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~-~~-~-~~~~-~~--~-----~~~~~~~~~l~el 233 (342)
.+|||||+|.||+.+++.+.+.-++++. ++|+++.... .....+ +. + .... .. . .-....+.+++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~-~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeL 102 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTF-KAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLI 102 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHH-HHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHH-HHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHH
Confidence 4799999999999999887444477755 5688765432 221111 20 0 0000 00 0 0011235799999
Q ss_pred hh--cCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCc-cCCHHHHHHHHHcCCc
Q 019328 234 LR--EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP-VIDEVALVEHLKQNPM 291 (342)
Q Consensus 234 l~--~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~-~vd~~aL~~aL~~g~i 291 (342)
++ ..|+|+.++|.. +... +-.++.|+.|.-++...-+- ..+-+.|.++-++..+
T Consensus 103 L~d~dIDaVviaTp~p-~~H~---e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gv 159 (446)
T 3upl_A 103 LSNPLIDVIIDATGIP-EVGA---ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGV 159 (446)
T ss_dssp HTCTTCCEEEECSCCH-HHHH---HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTC
T ss_pred hcCCCCCEEEEcCCCh-HHHH---HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCC
Confidence 97 489999999843 2111 22344455555555321111 1123466666555443
No 393
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.99 E-value=0.054 Score=51.35 Aligned_cols=95 Identities=17% Similarity=0.124 Sum_probs=61.5
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccc--cCCHHHHhh-----
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (342)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.++++.+.. +..+++ ........ ..++.+.+.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a-~~~Ga~~Vi~~~~~~~~~~--~a~~lG-------a~~vi~~~~~~~~~~~~i~~~~~g 262 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGA-KTAGASRIIGIDIDSKKYE--TAKKFG-------VNEFVNPKDHDKPIQEVIVDLTDG 262 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HHHTCSCEEEECSCTTHHH--HHHTTT-------CCEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHHH--HHHHcC-------CcEEEccccCchhHHHHHHHhcCC
Confidence 588999999999999999985 89999 8999998876532 222222 11100011 134444332
Q ss_pred cCCEEEEcCCCCcccccccCHhHHccCCCC-cEEEecCC
Q 019328 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~~li~~~~l~~mk~g-ailIN~sR 273 (342)
..|+|+-++...+ + -...++.+++| ..++.++-
T Consensus 263 g~D~vid~~g~~~-~----~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 263 GVDYSFECIGNVS-V----MRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CBSEEEECSCCHH-H----HHHHHHTBCTTTCEEEECSC
T ss_pred CCCEEEECCCCHH-H----HHHHHHHhhccCCEEEEEcc
Confidence 4799998887322 1 24567888886 88887763
No 394
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.97 E-value=0.026 Score=53.42 Aligned_cols=95 Identities=9% Similarity=0.044 Sum_probs=61.5
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-----cC
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~s 237 (342)
.|++|.|+|.|.||...++.+ +.+|+ +|++.+++.++.. +...++. .........++.+.+. ..
T Consensus 190 ~g~~VlV~GaG~vG~~a~qla-k~~Ga~~Vi~~~~~~~~~~--~a~~lGa-------~~vi~~~~~~~~~~~~~~~~gg~ 259 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAA-KVCGASIIIAVDIVESRLE--LAKQLGA-------THVINSKTQDPVAAIKEITDGGV 259 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHH-HHHTCSEEEEEESCHHHHH--HHHHHTC-------SEEEETTTSCHHHHHHHHTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEECCCHHHHH--HHHHcCC-------CEEecCCccCHHHHHHHhcCCCC
Confidence 478999999999999999985 78999 7999998765432 1122221 1000011123333222 47
Q ss_pred CEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
|+|+-++... ++ -...++.++++..++.++-
T Consensus 260 D~vid~~g~~-~~----~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 260 NFALESTGSP-EI----LKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EEEEECSCCH-HH----HHHHHHTEEEEEEEEECCC
T ss_pred cEEEECCCCH-HH----HHHHHHHHhcCCEEEEeCC
Confidence 9999887632 21 2457788899999998874
No 395
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.95 E-value=0.027 Score=52.43 Aligned_cols=97 Identities=19% Similarity=0.108 Sum_probs=62.9
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-----cC
Q 019328 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (342)
Q Consensus 164 ~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~s 237 (342)
.|++|.|.|. |.||..+++.+ +..|++|++.+++..+... ....++ ..........++.+.+. ..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~-~~~~~g-------~~~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIA-RLKGCRVVGIAGGAEKCRF-LVEELG-------FDGAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHHHH-HHHTTC-------CSEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH-HHHHcC-------CCEEEECCCHHHHHHHHHhcCCCc
Confidence 5889999999 99999999985 7999999999988654221 101111 11000011123333332 47
Q ss_pred CEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
|+|+.+... + .-...++.++++..++.++...
T Consensus 220 d~vi~~~g~--~----~~~~~~~~l~~~G~iv~~G~~~ 251 (336)
T 4b7c_A 220 DVFFDNVGG--E----ILDTVLTRIAFKARIVLCGAIS 251 (336)
T ss_dssp EEEEESSCH--H----HHHHHHTTEEEEEEEEECCCGG
T ss_pred eEEEECCCc--c----hHHHHHHHHhhCCEEEEEeecc
Confidence 888888762 1 2356778899999999887543
No 396
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=94.94 E-value=0.04 Score=53.61 Aligned_cols=70 Identities=11% Similarity=0.115 Sum_probs=49.0
Q ss_pred CEEEEEcc----ChHHHHHHHHHHhcC--CcEE-EEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--c
Q 019328 166 QTVGVIGA----GRIGSAYARMMVEGF--KMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--E 236 (342)
Q Consensus 166 ktvGIiG~----G~IG~~vA~~l~~a~--g~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~ 236 (342)
.+|||||+ |.||+..++.+ +.. ++++ .++|+++... +.+.+.++ .. ....+.+++++++ +
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l-~~~~~~~~lvav~d~~~~~~-~~~a~~~g-------~~--~~~~~~~~~~ll~~~~ 89 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAI-LQLSSQFQITALYSPKIETS-IATIQRLK-------LS--NATAFPTLESFASSST 89 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHH-HHTTTTEEEEEEECSSHHHH-HHHHHHTT-------CT--TCEEESSHHHHHHCSS
T ss_pred CEEEEEcccCCCChHHHHHHHHH-HhcCCCeEEEEEEeCCHHHH-HHHHHHcC-------CC--cceeeCCHHHHhcCCC
Confidence 58999999 99999999987 455 7886 4788886542 22222221 11 0123578999997 6
Q ss_pred CCEEEEcCCC
Q 019328 237 ADVISLHPVL 246 (342)
Q Consensus 237 sDiV~l~lpl 246 (342)
.|+|++++|.
T Consensus 90 vD~V~i~tp~ 99 (438)
T 3btv_A 90 IDMIVIAIQV 99 (438)
T ss_dssp CSEEEECSCH
T ss_pred CCEEEEeCCc
Confidence 8999999993
No 397
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.94 E-value=0.046 Score=50.70 Aligned_cols=94 Identities=18% Similarity=0.097 Sum_probs=62.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCcccccc-CCHHHHhh-----c
Q 019328 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA-SSMDEVLR-----E 236 (342)
Q Consensus 164 ~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~ell~-----~ 236 (342)
.|+++.|.|. |.||+.+++.+ +..|++|++.+++....... ..++ ......... .++.+.+. .
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~-~~~G~~V~~~~~~~~~~~~~--~~~g-------~~~~~d~~~~~~~~~~~~~~~~~~ 214 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIA-KLKGCKVVGAAGSDEKIAYL--KQIG-------FDAAFNYKTVNSLEEALKKASPDG 214 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHH-HHTTCEEEEEESSHHHHHHH--HHTT-------CSEEEETTSCSCHHHHHHHHCTTC
T ss_pred CCCEEEEecCCCcHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH--HhcC-------CcEEEecCCHHHHHHHHHHHhCCC
Confidence 5889999998 99999999986 78999999999876542211 2221 100000011 34444332 4
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+++.+... .+ -...++.++++..++.++-
T Consensus 215 ~d~vi~~~g~--~~----~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 215 YDCYFDNVGG--EF----LNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEEEEESSCH--HH----HHHHHTTEEEEEEEEECCC
T ss_pred CeEEEECCCh--HH----HHHHHHHHhcCCEEEEEec
Confidence 7999888762 21 3567788999999998874
No 398
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=94.94 E-value=0.27 Score=47.60 Aligned_cols=114 Identities=22% Similarity=0.186 Sum_probs=72.0
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCcEEE-EEcC----------ChhhHHHHHHhhhhhhhccCCCCCccccccCC
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDL----------YQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (342)
.++.|+||.|.|+|++|+.+|+.| ...|++|+ +.|. +.. ...+..+..+ ..... . .+
T Consensus 214 ~~l~gk~vaVqG~GnVG~~~a~~L-~~~GakVVavsD~~G~i~dp~Gld~~-~l~~~~~~~g------~v~~~---~-~~ 281 (419)
T 3aoe_E 214 LDLRGARVVVQGLGQVGAAVALHA-ERLGMRVVAVATSMGGMYAPEGLDVA-EVLSAYEATG------SLPRL---D-LA 281 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEEETTEEEECTTCCCHH-HHHHHHHHHS------SCSCC---C-BC
T ss_pred CCccCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEEcCCCeEECCCCCCHH-HHHHHHHhhC------Cccee---e-cc
Confidence 478999999999999999999997 58899998 5555 222 1222211111 00000 0 11
Q ss_pred HHHHh-hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEE
Q 019328 230 MDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 230 l~ell-~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ga 294 (342)
-++++ ..||+++-|-. .+.|+.+..+.++- .+++.-+-+.+- .+|- +.|.+..|.-+
T Consensus 282 ~~e~~~~~~DVliP~A~-----~n~i~~~~A~~l~a-k~V~EgAN~p~t-~~A~-~~L~~~Gi~~~ 339 (419)
T 3aoe_E 282 PEEVFGLEAEVLVLAAR-----EGALDGDRARQVQA-QAVVEVANFGLN-PEAE-AYLLGKGALVV 339 (419)
T ss_dssp TTTGGGSSCSEEEECSC-----TTCBCHHHHTTCCC-SEEEECSTTCBC-HHHH-HHHHHHTCEEE
T ss_pred chhhhccCceEEEeccc-----ccccccchHhhCCc-eEEEECCCCcCC-HHHH-HHHHHCCCEEE
Confidence 12332 47999998853 56678888888854 488899988864 4443 55555555433
No 399
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.91 E-value=0.031 Score=52.56 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=62.7
Q ss_pred CCCEEEEE-ccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-----cC
Q 019328 164 KGQTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (342)
Q Consensus 164 ~gktvGIi-G~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~s 237 (342)
.|++|.|+ |.|.||..+++.+ +..|++|++.+++.++... ..+++. .........++.+.+. ..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~--~~~lGa-------~~~~~~~~~~~~~~~~~~~~~g~ 236 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLA-RAFGAEVYATAGSTGKCEA--CERLGA-------KRGINYRSEDFAAVIKAETGQGV 236 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHHHH--HHHHTC-------SEEEETTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHHH--HHhcCC-------CEEEeCCchHHHHHHHHHhCCCc
Confidence 58899999 6899999999985 7999999999988764321 122221 1010111223433332 48
Q ss_pred CEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
|+|+.+... + .-...++.++++..++.++.
T Consensus 237 Dvvid~~g~-~-----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 237 DIILDMIGA-A-----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEEEESCCG-G-----GHHHHHHTEEEEEEEEECCC
T ss_pred eEEEECCCH-H-----HHHHHHHHhccCCEEEEEEe
Confidence 999988773 1 23567888999999998874
No 400
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.90 E-value=0.039 Score=52.09 Aligned_cols=94 Identities=14% Similarity=0.020 Sum_probs=60.6
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHH----Hhh--cC
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE----VLR--EA 237 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e----ll~--~s 237 (342)
.|++|.|+|.|.||...++.+ +.+|++|++.+++..+... ...++. .........++.+ +.. ..
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~~--~~~lGa-------~~vi~~~~~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIA-KATGAEVIVTSSSREKLDR--AFALGA-------DHGINRLEEDWVERVYALTGDRGA 258 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHH-HHTTCEEEEEESCHHHHHH--HHHHTC-------SEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEecCchhHHH--HHHcCC-------CEEEcCCcccHHHHHHHHhCCCCc
Confidence 588999999999999999985 8999999999988654321 222221 0000001123322 222 57
Q ss_pred CEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
|+|+-++. .+ .-...++.++++..++.++.
T Consensus 259 D~vid~~g--~~----~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 259 DHILEIAG--GA----GLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp EEEEEETT--SS----CHHHHHHHEEEEEEEEEECC
T ss_pred eEEEECCC--hH----HHHHHHHHhhcCCEEEEEec
Confidence 88888876 22 12456778888888888764
No 401
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.89 E-value=0.13 Score=47.81 Aligned_cols=104 Identities=21% Similarity=0.302 Sum_probs=61.4
Q ss_pred EEEEEcc-ChHHHHHHHHHHhcCC--cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccc---cCCHHHHhhcCCEE
Q 019328 167 TVGVIGA-GRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDEVLREADVI 240 (342)
Q Consensus 167 tvGIiG~-G~IG~~vA~~l~~a~g--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~ell~~sDiV 240 (342)
+|+|+|. |.+|..++..|+ .-| -+|..+|+...... .... .+ ...+..... ..++++.++.||+|
T Consensus 2 KI~IiGa~G~VG~~la~~L~-~~~~~~ev~L~Di~~~~~~---a~dL----~~-~~~~~~l~~~~~t~d~~~a~~~aDvV 72 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLK-NSPLVSRLTLYDIAHTPGV---AADL----SH-IETRATVKGYLGPEQLPDCLKGCDVV 72 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHH-TCTTCSEEEEEESSSHHHH---HHHH----TT-SSSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred EEEEECCCChHHHHHHHHHH-hCCCCcEEEEEeCCccHHH---HHHH----hc-cCcCceEEEecCCCCHHHHhCCCCEE
Confidence 7999998 999999999875 445 68999998762211 1111 11 111111111 13688889999999
Q ss_pred EEcCCCCc---cccc-cc--C----H---hHHccCCCCcEEEecCCCccCCHHH
Q 019328 241 SLHPVLDK---TTYH-LI--N----K---ERLATMKKEAILVNCSRGPVIDEVA 281 (342)
Q Consensus 241 ~l~lplt~---~t~~-li--~----~---~~l~~mk~gailIN~sRG~~vd~~a 281 (342)
+++..... +++. ++ | . +.+....|++++|+++ .++|.-.
T Consensus 73 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s--NPv~~~~ 124 (314)
T 1mld_A 73 VIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS--NPVNSTI 124 (314)
T ss_dssp EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHH
T ss_pred EECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CCcchhH
Confidence 99965322 1111 10 1 1 1223335889999974 4566544
No 402
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.88 E-value=0.033 Score=52.27 Aligned_cols=94 Identities=15% Similarity=0.139 Sum_probs=59.1
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh-h-----c
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-R-----E 236 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~-----~ 236 (342)
.|.+|.|+|.|.||...++.+ +..|+ +|++.+++.++.. +..+++. .........++.+.+ + .
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~~--~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~g 235 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGA-NHLGAGRIFAVGSRKHCCD--IALEYGA-------TDIINYKNGDIVEQILKATDGKG 235 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HTTTCSSEEEECCCHHHHH--HHHHHTC-------CEEECGGGSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCcEEEEECCCHHHHH--HHHHhCC-------ceEEcCCCcCHHHHHHHHcCCCC
Confidence 478999999999999999985 89999 8999998865422 2222221 101001112333322 1 4
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~s 272 (342)
.|+|+-++...+ .-...++.++++..++.++
T Consensus 236 ~D~v~d~~g~~~-----~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 236 VDKVVIAGGDVH-----TFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEEEECSSCTT-----HHHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCCChH-----HHHHHHHHHhcCCEEEEec
Confidence 788888776322 1245667778888888775
No 403
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=94.87 E-value=0.04 Score=53.08 Aligned_cols=77 Identities=13% Similarity=0.098 Sum_probs=48.5
Q ss_pred CEEEEEccChHHHHHHHHHHhcCC---cEEEEEcCChhhHHHHHHhhhhhhhccCCCC--CccccccCCHHHHhhc--CC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFK---MNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--PVTWKRASSMDEVLRE--AD 238 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ell~~--sD 238 (342)
++|+|+|.|.||+.+++.|+ ..| .+|.++||+..+. +...+.+.... ..... ........++++++++ +|
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~-~~g~~~~~V~v~~r~~~~~-~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMA-MNREVFSHITLASRTLSKC-QEIAQSIKAKG-YGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TCTTTCCEEEEEESCHHHH-HHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCceEEEEEECCHHHH-HHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 58999999999999999984 555 4999999987642 22222221100 00000 0001112457788887 89
Q ss_pred EEEEcCC
Q 019328 239 VISLHPV 245 (342)
Q Consensus 239 iV~l~lp 245 (342)
+|+.+.|
T Consensus 79 vVin~ag 85 (405)
T 4ina_A 79 IVLNIAL 85 (405)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9999988
No 404
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.87 E-value=0.039 Score=51.65 Aligned_cols=93 Identities=23% Similarity=0.215 Sum_probs=60.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh----h--c
Q 019328 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL----R--E 236 (342)
Q Consensus 164 ~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell----~--~ 236 (342)
.|++|.|.|. |.||..+++.+ +.+|++|++.+++.++.. +...++ ........ .++.+.+ . .
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~~~~~g-------a~~v~~~~-~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIA-KGMGAKVIAVVNRTAATE--FVKSVG-------ADIVLPLE-EGWAKAVREATGGAG 227 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSGGGHH--HHHHHT-------CSEEEESS-TTHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHH--HHHhcC-------CcEEecCc-hhHHHHHHHHhCCCC
Confidence 5889999998 99999999985 799999999998765432 112221 11110011 2333322 1 4
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+|+-++... .-...++.++++..++.++.
T Consensus 228 ~Dvvid~~g~~------~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 228 VDMVVDPIGGP------AFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EEEEEESCC--------CHHHHHHTEEEEEEEEEC--
T ss_pred ceEEEECCchh------HHHHHHHhhcCCCEEEEEEc
Confidence 78998887632 23567788899999988863
No 405
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=94.80 E-value=0.057 Score=48.56 Aligned_cols=40 Identities=20% Similarity=0.206 Sum_probs=33.4
Q ss_pred cccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhh
Q 019328 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (342)
Q Consensus 161 ~~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~ 201 (342)
..+.||++-|.|- |.||+.+|++|+ ..|++|+..+++...
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~~~~~~ 54 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLG-RLGAKVVVNYANSTK 54 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHH-HTTCEEEEEESSCHH
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHH
Confidence 4799999999987 689999999984 789999987665433
No 406
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=94.78 E-value=0.034 Score=56.22 Aligned_cols=104 Identities=15% Similarity=0.229 Sum_probs=63.7
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChh------------------hHHHHHHhhhhhhhccCCCCC
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQP 221 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 221 (342)
..|.+++|.|||.|.+|..+|+.|+ ..|. ++..+|...- ...+...+..... .....
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La-~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~i---NP~v~ 398 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI---FPLMD 398 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-TTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHH---CTTCE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhH---CCCcE
Confidence 5799999999999999999999985 6776 7888875410 0111111111000 00000
Q ss_pred cccc-------------------ccCCHHHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecC
Q 019328 222 VTWK-------------------RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 222 ~~~~-------------------~~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~s 272 (342)
+... ...+++++++++|+|+.|+. +.+++.+++...... +..+|+.+
T Consensus 399 v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatD-n~~tR~lin~~c~~~---~~plI~aa 464 (598)
T 3vh1_A 399 ATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 464 (598)
T ss_dssp EEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCS-BGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred EEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHhc---CCCEEEEE
Confidence 0000 01235678899999999986 667888887765543 33566543
No 407
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=94.75 E-value=0.032 Score=51.52 Aligned_cols=104 Identities=14% Similarity=0.037 Sum_probs=62.5
Q ss_pred CEEEEEcc-ChHHHHHHHHHHhcCCcE-EEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--cCCEEE
Q 019328 166 QTVGVIGA-GRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (342)
Q Consensus 166 ktvGIiG~-G~IG~~vA~~l~~a~g~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~sDiV~ 241 (342)
.++.|+|. |++|+.+++.+ ...|++ |...+|..... .-.+...+.+++++.+ ..|+++
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l-~~~g~~~V~~VnP~~~g~-----------------~i~G~~vy~sl~el~~~~~~Dv~i 75 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKM-LECGTKIVGGVTPGKGGQ-----------------NVHGVPVFDTVKEAVKETDANASV 75 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHH-HHTTCCEEEEECTTCTTC-----------------EETTEEEESSHHHHHHHHCCCEEE
T ss_pred CEEEEECCCCCHHHHHHHHH-HhCCCeEEEEeCCCCCCc-----------------eECCEeeeCCHHHHhhcCCCCEEE
Confidence 35788899 99999999987 566776 33555532100 0012334678999998 899999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCCCc-cCCHHHHHHHHHcCCc
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGP-VIDEVALVEHLKQNPM 291 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~-~vd~~aL~~aL~~g~i 291 (342)
+++| ++...-+-++.++ .+... +|..+.|= .-+++.|.++.++..+
T Consensus 76 i~vp--~~~~~~~v~ea~~-~Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi 122 (294)
T 2yv1_A 76 IFVP--APFAKDAVFEAID-AGIEL-IVVITEHIPVHDTMEFVNYAEDVGV 122 (294)
T ss_dssp ECCC--HHHHHHHHHHHHH-TTCSE-EEECCSCCCHHHHHHHHHHHHHHTC
T ss_pred EccC--HHHHHHHHHHHHH-CCCCE-EEEECCCCCHHHHHHHHHHHHHcCC
Confidence 9999 4322222222333 22232 34444442 2345688888877555
No 408
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.75 E-value=0.12 Score=48.62 Aligned_cols=97 Identities=13% Similarity=0.029 Sum_probs=60.5
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcE-EEEEcCChhhHHHHHHhhhhhhhccCCCCCcccc--ccCCHHHHh------
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK--RASSMDEVL------ 234 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ell------ 234 (342)
.|.+|.|+|.|.+|...++.+ +.+|++ |++.++++++... ..++. ......... ...++.+.+
T Consensus 179 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~~--a~~l~-----~~~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCA-KAAGACPLVITDIDEGRLKF--AKEIC-----PEVVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HHTTCCSEEEEESCHHHHHH--HHHHC-----TTCEEEECCSCCHHHHHHHHHHHTSS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHHH--HHHhc-----hhcccccccccchHHHHHHHHHHhCC
Confidence 478999999999999999985 899998 9999887654321 11110 000000000 001122211
Q ss_pred hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 235 ~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
...|+|+-++... .+ -...++.++++..++.++-
T Consensus 251 ~g~Dvvid~~g~~-~~----~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 251 IEPAVALECTGVE-SS----IAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CCCSEEEECSCCH-HH----HHHHHHHSCTTCEEEECCC
T ss_pred CCCCEEEECCCCh-HH----HHHHHHHhcCCCEEEEEcc
Confidence 2589999988732 11 2456788999999999874
No 409
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=94.71 E-value=0.038 Score=52.49 Aligned_cols=69 Identities=13% Similarity=0.145 Sum_probs=45.4
Q ss_pred CEEEEEc-cChHHHH-HH----HHHHhcCCcEE----------EEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCC
Q 019328 166 QTVGVIG-AGRIGSA-YA----RMMVEGFKMNL----------IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (342)
Q Consensus 166 ktvGIiG-~G~IG~~-vA----~~l~~a~g~~V----------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (342)
.+||||| +|.||+. .+ +.+...-+..+ .++|+++... +.+.+.++ .. ..+.+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a-~~~a~~~~-------~~----~~~~~ 74 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKV-EALAKRFN-------IA----RWTTD 74 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHH-HHHHHHTT-------CC----CEESC
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHH-HHHHHHhC-------CC----cccCC
Confidence 4799999 9999998 56 55433333332 3889887642 22222222 10 13579
Q ss_pred HHHHhhc--CCEEEEcCCC
Q 019328 230 MDEVLRE--ADVISLHPVL 246 (342)
Q Consensus 230 l~ell~~--sDiV~l~lpl 246 (342)
++++++. .|+|+++.|.
T Consensus 75 ~~~ll~~~~iD~V~i~tp~ 93 (383)
T 3oqb_A 75 LDAALADKNDTMFFDAATT 93 (383)
T ss_dssp HHHHHHCSSCCEEEECSCS
T ss_pred HHHHhcCCCCCEEEECCCc
Confidence 9999976 8999999994
No 410
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=94.71 E-value=0.16 Score=47.27 Aligned_cols=109 Identities=21% Similarity=0.234 Sum_probs=64.7
Q ss_pred CEEEEEc-cChHHHHHHHHHHh--cCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCcccccc--CCHHHHhhcCCEE
Q 019328 166 QTVGVIG-AGRIGSAYARMMVE--GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA--SSMDEVLREADVI 240 (342)
Q Consensus 166 ktvGIiG-~G~IG~~vA~~l~~--a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ell~~sDiV 240 (342)
.+|+|+| .|.+|..+|..|+. .+.-++..+|..... +...... .+ .......... .+..+.++.||+|
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~--~G~a~Dl----~~-~~~~~~v~~~~~~~~~~~~~~aDiv 73 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVT--PGVAVDL----SH-IPTAVKIKGFSGEDATPALEGADVV 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTH--HHHHHHH----HT-SCSSEEEEEECSSCCHHHHTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCc--hhHHHHh----hC-CCCCceEEEecCCCcHHHhCCCCEE
Confidence 3799999 99999999998754 366789999987621 1111111 11 1111111111 2567788999999
Q ss_pred EEcCCCC--c-cccc-cc--CH-------hHHccCCCCcEEEecCCCccCCHHHHH
Q 019328 241 SLHPVLD--K-TTYH-LI--NK-------ERLATMKKEAILVNCSRGPVIDEVALV 283 (342)
Q Consensus 241 ~l~lplt--~-~t~~-li--~~-------~~l~~mk~gailIN~sRG~~vd~~aL~ 283 (342)
+++.+.. | .||. ++ |. +.+....|++++++++ .++|.-..+
T Consensus 74 ii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t~~ 127 (312)
T 3hhp_A 74 LISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTVAI 127 (312)
T ss_dssp EECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHHHH
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHHHH
Confidence 9986532 2 1221 22 11 1233346889999996 566665544
No 411
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.70 E-value=0.039 Score=50.95 Aligned_cols=38 Identities=24% Similarity=0.521 Sum_probs=32.1
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCCh
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ 199 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~ 199 (342)
..|++++|.|||.|.+|..+|+.|+ ..|. ++..+|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La-~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLT-RCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHH-HcCCCEEEEECCCc
Confidence 4699999999999999999999985 4564 788888764
No 412
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=94.68 E-value=0.66 Score=42.63 Aligned_cols=69 Identities=16% Similarity=0.089 Sum_probs=51.2
Q ss_pred ccCCCEEEEEcc---ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCC
Q 019328 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (342)
Q Consensus 162 ~l~gktvGIiG~---G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sD 238 (342)
.+.|++|+++|= +++.++.+..+ ..||++|....|..-.. +. +. ..+.....++++.++++|
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~-~~~g~~v~~~~P~~~~p-~~--------~~-----~~g~~~~~d~~eav~~aD 207 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLL-NMFGAKIGVCGPKTLIP-RD--------VE-----VFKVDVFDDVDKGIDWAD 207 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHH-HHTTCEEEEESCGGGSC-TT--------GG-----GGCEEEESSHHHHHHHCS
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HHCCCEEEEECCchhCC-ch--------HH-----HCCCEEEcCHHHHhCCCC
Confidence 478999999997 89999999997 68999999988743110 00 00 112233579999999999
Q ss_pred EEEEcCCC
Q 019328 239 VISLHPVL 246 (342)
Q Consensus 239 iV~l~lpl 246 (342)
+|.. +-.
T Consensus 208 vvy~-~~~ 214 (291)
T 3d6n_B 208 VVIW-LRL 214 (291)
T ss_dssp EEEE-CCC
T ss_pred EEEE-eCc
Confidence 9998 654
No 413
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.61 E-value=0.14 Score=46.96 Aligned_cols=110 Identities=13% Similarity=0.112 Sum_probs=72.8
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
.++|++|.|+|-.......++.| ...|.+|..+.-.... | ...+.....++.+.++++|+|+
T Consensus 4 ~~~~mki~v~~~~~~~~~~~~~L-~~~g~~v~~~~~~~~~--------~---------~~~g~~~~~~~~~~~~~~d~ii 65 (300)
T 2rir_A 4 MLTGLKIAVIGGDARQLEIIRKL-TEQQADIYLVGFDQLD--------H---------GFTGAVKCNIDEIPFQQIDSII 65 (300)
T ss_dssp CCCSCEEEEESBCHHHHHHHHHH-HHTTCEEEEESCTTSS--------C---------CCTTEEECCGGGSCGGGCSEEE
T ss_pred cccCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeccccc--------c---------ccccceeccchHHHHhcCCEEE
Confidence 36788999999999999999997 6789998876321110 0 0011112345677788999998
Q ss_pred EcCCCCc----------ccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCccEE
Q 019328 242 LHPVLDK----------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (342)
Q Consensus 242 l~lplt~----------~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ga 294 (342)
...|... .+...++++.++.++++.+++ + ++ |..++.+++.+..+.-.
T Consensus 66 ~~~~~~~~~~~i~s~~a~~~~~~~~~~l~~~~~l~~i~-~---g~-~~~d~~~~~~~~gi~v~ 123 (300)
T 2rir_A 66 LPVSATTGEGVVSTVFSNEEVVLKQDHLDRTPAHCVIF-S---GI-SNAYLENIAAQAKRKLV 123 (300)
T ss_dssp CCSSCEETTTEECBSSCSSCEECCHHHHHTSCTTCEEE-E---SS-CCHHHHHHHHHTTCCEE
T ss_pred eccccccCCcccccccccCCccchHHHHhhcCCCCEEE-E---ec-CCHHHHHHHHHCCCEEE
Confidence 7555322 233447899999999998877 2 32 66775666666555544
No 414
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=94.60 E-value=0.05 Score=52.03 Aligned_cols=32 Identities=22% Similarity=0.376 Sum_probs=25.0
Q ss_pred CEEEEEccChHHHHHHHHHHhc--CCcEEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEG--FKMNLIYYDL 197 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a--~g~~V~~~d~ 197 (342)
.+|||+|+|+||+.+.|.|... -+++|.+.+.
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd 36 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINN 36 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEEC
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEec
Confidence 3799999999999999986433 3588876543
No 415
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.56 E-value=0.15 Score=45.82 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=32.9
Q ss_pred cccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCC
Q 019328 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLY 198 (342)
Q Consensus 161 ~~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~ 198 (342)
..+.||++-|.|- |.||+.+|+.|+ ..|++|+..+++
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~~~ 43 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLA-EEGADIILFDIC 43 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHH-HCCCeEEEEccc
Confidence 3689999999997 789999999984 789999999886
No 416
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=94.55 E-value=0.11 Score=49.08 Aligned_cols=30 Identities=27% Similarity=0.223 Sum_probs=23.8
Q ss_pred CEEEEEccChHHHHHHHHHHhcCCcEEEEE
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYY 195 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~g~~V~~~ 195 (342)
.+|||+|+|+||+.+++.+...-+++|.+.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV 32 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGV 32 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEE
Confidence 489999999999999998743336887655
No 417
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.55 E-value=0.037 Score=52.07 Aligned_cols=102 Identities=13% Similarity=0.120 Sum_probs=57.9
Q ss_pred CEEEEEccChHHHHHHHHHHhcC---------CcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh
Q 019328 166 QTVGVIGAGRIGSAYARMMVEGF---------KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR 235 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a~---------g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~ 235 (342)
.+|||||+|.||+.+++.+. .. +++|. ++|++..+. .+ .+. .....++++++
T Consensus 4 irvgIiG~G~VG~~~~~~l~-~~~~~l~~~g~~~~lvaV~d~~~~~~--------------~~-~~~-~~~~~d~~~ll- 65 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVL-ERAEELSAFGVVPRFLGVLVRDPRKP--------------RA-IPQ-ELLRAEPFDLL- 65 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHH-HTGGGGGGGTEEEEEEEEECSCTTSC--------------CS-SCG-GGEESSCCCCT-
T ss_pred eEEEEEcCCHHHHHHHHHHH-hChhhHhhcCCCEEEEEEEECCHHHh--------------hc-cCc-ccccCCHHHHh-
Confidence 37999999999999999863 33 46654 557664321 00 111 12345788888
Q ss_pred cCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCcc-CCHHHHHHHHHcC
Q 019328 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQN 289 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~-vd~~aL~~aL~~g 289 (342)
+.|+|+.|+|.....+. -..+.++.|.-+|...-..+ -.-+.|.++.++.
T Consensus 66 ~iDvVve~t~~~~~a~~----~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLR----LVLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp TCSEEEECCCCSHHHHH----HHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred CCCEEEECCCCcHHHHH----HHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 89999999984421111 11234445544444222222 2445666665554
No 418
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=94.51 E-value=0.077 Score=50.01 Aligned_cols=32 Identities=25% Similarity=0.405 Sum_probs=25.1
Q ss_pred CEEEEEccChHHHHHHHHHHh---cCCcEEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVE---GFKMNLIYYDL 197 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~---a~g~~V~~~d~ 197 (342)
.+|||+|+|.||+.+.|.|.. .-+++|.+.+.
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~ 37 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE 37 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEEC
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeC
Confidence 379999999999999998743 23678876654
No 419
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.47 E-value=0.024 Score=52.93 Aligned_cols=89 Identities=12% Similarity=0.136 Sum_probs=55.2
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccc--cccCCHHHH-hhcCCEEE
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTW--KRASSMDEV-LREADVIS 241 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~el-l~~sDiV~ 241 (342)
.+++.|+|+|.+|+.+++.| ...|. |.+.|++++... ..+ . +..-... .....|+++ +++||.++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L-~~~g~-v~vid~~~~~~~--~~~-~-------~~~~i~gd~~~~~~L~~a~i~~a~~vi 182 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLREL-RGSEV-FVLAEDENVRKK--VLR-S-------GANFVHGDPTRVSDLEKANVRGARAVI 182 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTG-GGSCE-EEEESCGGGHHH--HHH-T-------TCEEEESCTTSHHHHHHTCSTTEEEEE
T ss_pred cCCEEEECCcHHHHHHHHHH-HhCCc-EEEEeCChhhhh--HHh-C-------CcEEEEeCCCCHHHHHhcChhhccEEE
Confidence 56899999999999999997 67888 999999876422 111 1 1100000 011123444 67899999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcE
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAI 267 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gai 267 (342)
++++.. ..++.-....+.+.|...
T Consensus 183 ~~~~~d--~~n~~~~~~ar~~~~~~~ 206 (336)
T 1lnq_A 183 VDLESD--SETIHCILGIRKIDESVR 206 (336)
T ss_dssp ECCSSH--HHHHHHHHHHHTTCTTSE
T ss_pred EcCCcc--HHHHHHHHHHHHHCCCCe
Confidence 998843 344444455666666533
No 420
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.30 E-value=0.23 Score=44.11 Aligned_cols=38 Identities=24% Similarity=0.303 Sum_probs=32.9
Q ss_pred ccCCCEEEEEcc-Ch--HHHHHHHHHHhcCCcEEEEEcCChh
Q 019328 162 LLKGQTVGVIGA-GR--IGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 162 ~l~gktvGIiG~-G~--IG~~vA~~l~~a~g~~V~~~d~~~~ 200 (342)
++.||++-|.|. |. ||+.+|+.|+ ..|++|+..+++.+
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~-~~G~~V~~~~r~~~ 44 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLH-EAGARLIFTYAGER 44 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEecCchH
Confidence 688999999998 55 9999999985 77999999988754
No 421
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.28 E-value=0.047 Score=51.56 Aligned_cols=95 Identities=16% Similarity=0.111 Sum_probs=62.8
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-----cC
Q 019328 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (342)
Q Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~s 237 (342)
.|++|.|+| .|.||..+++.+ +.+|++|++.+++.++.. +...++ ..........++.+.+. ..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a-~~~Ga~Vi~~~~~~~~~~--~~~~~G-------a~~~~~~~~~~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLS-KKAKCHVIGTCSSDEKSA--FLKSLG-------CDRPINYKTEPVGTVLKQEYPEGV 232 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHH-HHTTCEEEEEESSHHHHH--HHHHTT-------CSEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHH-HhCCCEEEEEECCHHHHH--HHHHcC-------CcEEEecCChhHHHHHHHhcCCCC
Confidence 478999999 799999999985 789999999998865421 111221 11000011124444332 47
Q ss_pred CEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
|+|+.++.. + .-...++.|+++..++.++..
T Consensus 233 D~vid~~g~-~-----~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 233 DVVYESVGG-A-----MFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp EEEEECSCT-H-----HHHHHHHHEEEEEEEEECCCG
T ss_pred CEEEECCCH-H-----HHHHHHHHHhcCCEEEEEeCC
Confidence 999998873 1 234577888999999988753
No 422
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.24 E-value=0.051 Score=50.32 Aligned_cols=94 Identities=13% Similarity=0.080 Sum_probs=61.8
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh------hc
Q 019328 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (342)
Q Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~ 236 (342)
.|++|.|+| .|.||..+++.+ +..|++|++.+++..+.. +...++. .........++.+.+ ..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~~~~~Ga-------~~~~~~~~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWA-KALGAKLIGTVSSPEKAA--HAKALGA-------WETIDYSHEDVAKRVLELTDGKK 209 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESSHHHHH--HHHHHTC-------SEEEETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHH--HHHHcCC-------CEEEeCCCccHHHHHHHHhCCCC
Confidence 588999999 899999999985 789999999998765432 1122221 000001112333222 25
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+|+.++.. + .-...++.++++..++.++.
T Consensus 210 ~Dvvid~~g~--~----~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 210 CPVVYDGVGQ--D----TWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEEEEESSCG--G----GHHHHHTTEEEEEEEEECCC
T ss_pred ceEEEECCCh--H----HHHHHHHHhcCCCEEEEEec
Confidence 7899888763 1 23467888999999999864
No 423
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=94.23 E-value=0.067 Score=49.41 Aligned_cols=104 Identities=17% Similarity=0.082 Sum_probs=61.5
Q ss_pred CEEEEEcc-ChHHHHHHHHHHhcCCcE-EEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh--c-CCEE
Q 019328 166 QTVGVIGA-GRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--E-ADVI 240 (342)
Q Consensus 166 ktvGIiG~-G~IG~~vA~~l~~a~g~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~-sDiV 240 (342)
.++.|+|. |++|+.+++.+ ...|.+ |..++|..... .-.+...+.+++++.+ . .|++
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l-~~~g~~~v~~VnP~~~g~-----------------~i~G~~vy~sl~el~~~~~~~Dva 75 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAM-LEYGTKVVAGVTPGKGGS-----------------EVHGVPVYDSVKEALAEHPEINTS 75 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTTC-----------------EETTEEEESSHHHHHHHCTTCCEE
T ss_pred CEEEEECCCCCHHHHHHHHH-HhCCCcEEEEeCCCCCCc-----------------eECCEeeeCCHHHHhhcCCCCCEE
Confidence 34777798 99999999987 456887 44556542100 0012334678999987 5 9999
Q ss_pred EEcCCCCcccccccCHhHHccCCCCcEEEecCCCcc-CCHHHHHHHHHcCCc
Q 019328 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPM 291 (342)
Q Consensus 241 ~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~-vd~~aL~~aL~~g~i 291 (342)
++++|- +.+...+ ++..+ .+... +|..+.|=. -+++.|.++.++..+
T Consensus 76 Ii~vp~-~~~~~~v-~ea~~-~Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi 123 (297)
T 2yv2_A 76 IVFVPA-PFAPDAV-YEAVD-AGIRL-VVVITEGIPVHDTMRFVNYARQKGA 123 (297)
T ss_dssp EECCCG-GGHHHHH-HHHHH-TTCSE-EEECCCCCCHHHHHHHHHHHHHHTC
T ss_pred EEecCH-HHHHHHH-HHHHH-CCCCE-EEEECCCCCHHHHHHHHHHHHHcCC
Confidence 999993 2233322 22222 22222 333444422 345688888877554
No 424
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.22 E-value=0.053 Score=50.41 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=59.9
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh------hc
Q 019328 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (342)
Q Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~ 236 (342)
.|++|.|+| .|.||...++.+ +..|++|++.+++.++.. +..+++ ..........++.+.+ ..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~~~~~g-------a~~~~~~~~~~~~~~~~~~~~~~g 217 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLL-KMKGAHTIAVASTDEKLK--IAKEYG-------AEYLINASKEDILRQVLKFTNGKG 217 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHTTCEEEEEESSHHHHH--HHHHTT-------CSEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHH--HHHHcC-------CcEEEeCCCchHHHHHHHHhCCCC
Confidence 588999999 899999999985 799999999999765432 222221 1100001112332222 14
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+|+.+... + .-...++.++++..++.++.
T Consensus 218 ~D~vid~~g~--~----~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 218 VDASFDSVGK--D----TFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EEEEEECCGG--G----GHHHHHHHEEEEEEEEECCC
T ss_pred ceEEEECCCh--H----HHHHHHHHhccCCEEEEEcC
Confidence 6888887762 1 23456777888888888753
No 425
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.21 E-value=0.092 Score=48.73 Aligned_cols=79 Identities=19% Similarity=0.127 Sum_probs=46.5
Q ss_pred cCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhh--HHHHHHhhhhhhhccCCCCCc--cccccCCHHHHhh--
Q 019328 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT--RLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLR-- 235 (342)
Q Consensus 163 l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~-- 235 (342)
...++|.|.|. |.||+.+++.| ...|.+|++.+|+... ......... ...+..-. ......++.++++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L-~~~g~~V~~l~R~~~~~~~~~~~~~~l----~~~~v~~~~~Dl~d~~~l~~~~~~~ 82 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATAS-LDAHRPTYILARPGPRSPSKAKIFKAL----EDKGAIIVYGLINEQEAMEKILKEH 82 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHH-HHTTCCEEEEECSSCCCHHHHHHHHHH----HHTTCEEEECCTTCHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHHH-HHCCCCEEEEECCCCCChhHHHHHHHH----HhCCcEEEEeecCCHHHHHHHHhhC
Confidence 34678999998 99999999998 4678999999987611 111100000 00111000 0111235677788
Q ss_pred cCCEEEEcCCC
Q 019328 236 EADVISLHPVL 246 (342)
Q Consensus 236 ~sDiV~l~lpl 246 (342)
++|+|+.+...
T Consensus 83 ~~d~Vi~~a~~ 93 (346)
T 3i6i_A 83 EIDIVVSTVGG 93 (346)
T ss_dssp TCCEEEECCCG
T ss_pred CCCEEEECCch
Confidence 89998887763
No 426
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=94.19 E-value=0.025 Score=51.73 Aligned_cols=74 Identities=22% Similarity=0.196 Sum_probs=44.9
Q ss_pred CEEEEEcc-ChHHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEc
Q 019328 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (342)
Q Consensus 166 ktvGIiG~-G~IG~~vA~~l~~a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~ 243 (342)
.+|+|+|+ |.||+.+++.+...-|+++. ++|+........ ..+. ..+....+.....++++++..+|+|+-+
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~---d~~~---~~g~~~~~v~~~~dl~~~l~~~DvVIDf 79 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS---DAGE---LAGAGKTGVTVQSSLDAVKDDFDVFIDF 79 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC---CTTC---SSSSSCCSCCEESCSTTTTTSCSEEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhh---hHHH---HcCCCcCCceecCCHHHHhcCCCEEEEc
Confidence 48999998 99999999986445678876 677754320000 0000 0011111222245788888899999955
Q ss_pred CC
Q 019328 244 PV 245 (342)
Q Consensus 244 lp 245 (342)
.+
T Consensus 80 t~ 81 (273)
T 1dih_A 80 TR 81 (273)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 427
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=94.15 E-value=0.098 Score=49.30 Aligned_cols=31 Identities=23% Similarity=0.420 Sum_probs=24.6
Q ss_pred CEEEEEccChHHHHHHHHHHhc--CCcEEEEEc
Q 019328 166 QTVGVIGAGRIGSAYARMMVEG--FKMNLIYYD 196 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a--~g~~V~~~d 196 (342)
.+|||+|+|.||+.+.|.|... -+++|.+.+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaIn 35 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAIN 35 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEe
Confidence 3899999999999999987433 358887654
No 428
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.15 E-value=0.15 Score=49.50 Aligned_cols=97 Identities=22% Similarity=0.138 Sum_probs=60.0
Q ss_pred CCCEEEEEccC----------hHHHHHHHHHHhcCCcEEEEEcCChhhHHH-HHHhhhhhhhccCCCCCccccccCCHHH
Q 019328 164 KGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLE-KFVTAYGQFLKANGEQPVTWKRASSMDE 232 (342)
Q Consensus 164 ~gktvGIiG~G----------~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~e 232 (342)
.|++|+|+|+. .-...+++.| ...|++|.+|||..+.... .....|+. . ...........++.+
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L-~~~g~~v~~~DP~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~ 386 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEML-IGKGYELRIFDRNVEYARVHGANKEYIE---S-KIPHVSSLLVSDLDE 386 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECHHHHHHTTSSSCHHHHH---H-TSHHHHTTBCSCHHH
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHH-HHCCCEEEEECCCCChhhccchhhhhcc---c-ccccccccccCCHHH
Confidence 68999999997 5678899998 6899999999997432110 00000100 0 000000012357888
Q ss_pred HhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEec
Q 019328 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (342)
Q Consensus 233 ll~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~ 271 (342)
.++.||.|+++..- ++-+.+ + .+.|+ +.+++++
T Consensus 387 ~~~~~d~~vi~~~~-~~~~~~-~---~~~~~-~~~i~D~ 419 (436)
T 1mv8_A 387 VVASSDVLVLGNGD-ELFVDL-V---NKTPS-GKKLVDL 419 (436)
T ss_dssp HHHHCSEEEECSCC-GGGHHH-H---HSCCT-TCEEEES
T ss_pred HHhCCcEEEEeCCc-HHHHhh-h---HHhcC-CCEEEEC
Confidence 99999999999874 333221 1 44566 6788887
No 429
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.15 E-value=0.26 Score=48.51 Aligned_cols=112 Identities=13% Similarity=0.084 Sum_probs=69.9
Q ss_pred ccCCCEEEEEccC----------hHHHHHHHHHHhcCCcEEEEEcCChhhHH--HHHHhhhhhhhccCCCCCccccccCC
Q 019328 162 LLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRL--EKFVTAYGQFLKANGEQPVTWKRASS 229 (342)
Q Consensus 162 ~l~gktvGIiG~G----------~IG~~vA~~l~~a~g~~V~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (342)
.+.|++|+|+|+- .-...+++.| ...|++|.+|||...... .+....++.... ........+
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L-~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 405 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHL-MEEHAKLSVYDPKVQKSQMLNDLASVTSAQDV-----ERLITVESD 405 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSSCHHHHHHHHHHHSCHHHH-----HHHEEEESS
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHH-HHCCCEEEEECCCCCchhhHHHHHhhhccccc-----cCceeecCC
Confidence 4799999999974 4667888987 688999999999864321 111100000000 000112357
Q ss_pred HHHHhhcCCEEEEcCCCCcccccccCHh-HHccCCCCcEEEecCCCccCCHHHHH
Q 019328 230 MDEVLREADVISLHPVLDKTTYHLINKE-RLATMKKEAILVNCSRGPVIDEVALV 283 (342)
Q Consensus 230 l~ell~~sDiV~l~lplt~~t~~li~~~-~l~~mk~gailIN~sRG~~vd~~aL~ 283 (342)
+.+.++.+|.|++++.- ++-+. ++-+ ..+.|+...+++++ |+ ++|.+.+.
T Consensus 406 ~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~~ 456 (481)
T 2o3j_A 406 PYAAARGAHAIVVLTEW-DEFVE-LNYSQIHNDMQHPAAIFDG-RL-ILDQKALR 456 (481)
T ss_dssp HHHHHTTCSEEEECSCC-GGGTT-SCHHHHHHHSCSSCEEEES-SS-CSCHHHHH
T ss_pred HHHHHcCCCEEEEcCCc-HHhhc-cCHHHHHHhcCCCCEEEEC-CC-CCCHHHHH
Confidence 78899999999999874 33333 3544 44567776688886 55 35655443
No 430
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=94.12 E-value=0.053 Score=48.83 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=33.2
Q ss_pred ccCCCEEEEEcc---ChHHHHHHHHHHhcCCcEEEEEcCChh
Q 019328 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 162 ~l~gktvGIiG~---G~IG~~vA~~l~~a~g~~V~~~d~~~~ 200 (342)
.+.||++-|.|- |.||+.+|+.|+ ..|++|+..+|+..
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~-~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCF-NQGATLAFTYLNES 43 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHH-TTTCEEEEEESSTT
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEeCCHH
Confidence 478999999997 699999999984 77999999998764
No 431
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=94.08 E-value=1 Score=43.97 Aligned_cols=168 Identities=17% Similarity=0.208 Sum_probs=107.7
Q ss_pred CCceEEcCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEccChHHHHHHHHHHhc
Q 019328 108 YGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEG 187 (342)
Q Consensus 108 ~gI~v~n~p~~~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~w~~w~~~~~~g~~l~gktvGIiG~G~IG~~vA~~l~~a 187 (342)
..|+|.|+.- +-+|=-+++-+|+.+|-. |+.|...+|.|.|.|.-|-.+|+.+ ..
T Consensus 186 ~~ipvFnDD~---qGTA~V~lAgllnAlki~---------------------gk~l~d~riV~~GAGaAGigia~ll-~~ 240 (487)
T 3nv9_A 186 CDIPVWHDDQ---QGTASVTLAGLLNALKLV---------------------KKDIHECRMVFIGAGSSNTTCLRLI-VT 240 (487)
T ss_dssp CSSCEEETTT---HHHHHHHHHHHHHHHHHH---------------------TCCGGGCCEEEECCSHHHHHHHHHH-HH
T ss_pred ccCCcccccc---chHHHHHHHHHHHHHHHh---------------------CCChhhcEEEEECCCHHHHHHHHHH-HH
Confidence 4799999874 345667788888777532 4578889999999999999999997 57
Q ss_pred CCc---EEEEEcCCh---hhH--HHH-----HHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcCCCCccccccc
Q 019328 188 FKM---NLIYYDLYQ---ATR--LEK-----FVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (342)
Q Consensus 188 ~g~---~V~~~d~~~---~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~lplt~~t~~li 254 (342)
.|+ +|+.+|+.- +.+ ... +...+ .+.... ....+|.|+++.+|+++=. ... ..+.|
T Consensus 241 ~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~---A~~~n~-----~~~~~L~eav~~adVlIG~-S~~--~pg~f 309 (487)
T 3nv9_A 241 AGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEI---CETTNP-----SKFGSIAEACVGADVLISL-STP--GPGVV 309 (487)
T ss_dssp TTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHH---HHHSCT-----TCCCSHHHHHTTCSEEEEC-CCS--SCCCC
T ss_pred cCCCcccEEEEeccccccCCcchhhhhcccHHHHHH---HHhccc-----ccCCCHHHHHhcCCEEEEe-ccc--CCCCC
Confidence 898 799999762 111 111 00011 111110 0235899999999976544 211 14789
Q ss_pred CHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCC-ccEEEeecCCCCCCCCCCccCCCceEEcCCCC
Q 019328 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP-MFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIA 322 (342)
Q Consensus 255 ~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~-i~gaalDV~~~EP~~~~~L~~~~nvi~TPHia 322 (342)
.++.++.|.+.+++.=.|.-.. |-.-.+|.+.|+ |.+-|- -+.| -+..|+++-|-++
T Consensus 310 t~e~V~~Ma~~PIIFaLSNPtp--Ei~pe~A~~~G~aIvATGr-----sd~P----nQ~NN~liFPGI~ 367 (487)
T 3nv9_A 310 KAEWIKSMGEKPIVFCCANPVP--EIYPYEAKEAGAYIVATGR-----GDFP----NQVNNSVGFPGIL 367 (487)
T ss_dssp CHHHHHTSCSSCEEEECCSSSC--SSCHHHHHHTTCSEEEESC-----TTSS----SBCCGGGTHHHHH
T ss_pred CHHHHHhhcCCCEEEECCCCCc--cCCHHHHHHhCCEEEEECC-----CCCc----ccCcceeEcchhh
Confidence 9999999999999998887654 222223333555 333321 1111 3557788887654
No 432
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.06 E-value=0.042 Score=51.28 Aligned_cols=94 Identities=15% Similarity=0.112 Sum_probs=60.6
Q ss_pred CCCEEEEEccC-hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh------hc
Q 019328 164 KGQTVGVIGAG-RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (342)
Q Consensus 164 ~gktvGIiG~G-~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~ 236 (342)
.|++|.|+|.| .||...++.+ +.+|++|++.+++.++... ...++. .........++.+.+ ..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~--~~~lga-------~~~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLS-QILNFRLIAVTRNNKHTEE--LLRLGA-------AYVIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESSSTTHHH--HHHHTC-------SEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEeCCccHHHHHHHHHH-HHcCCEEEEEeCCHHHHHH--HHhCCC-------cEEEeCCcccHHHHHHHHhCCCC
Confidence 58899999998 9999999985 7899999999987654321 112221 100001112333322 25
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+|+.++.. +.+ .+.++.++++..++.++-
T Consensus 214 ~Dvvid~~g~-~~~-----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 214 ADAAIDSIGG-PDG-----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEEEEESSCH-HHH-----HHHHHTEEEEEEEEECCC
T ss_pred CcEEEECCCC-hhH-----HHHHHHhcCCCEEEEEee
Confidence 7999888763 222 345578899999999874
No 433
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.05 E-value=0.075 Score=45.90 Aligned_cols=73 Identities=15% Similarity=0.018 Sum_probs=47.5
Q ss_pred CEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
++|.|.| .|.||+.+++.| ..-|.+|++.+|++..... ....+ . ..........++.++++.+|+|+.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L-~~~g~~V~~~~r~~~~~~~-~~~~~----~---~~~~Dl~d~~~~~~~~~~~d~vi~~a 75 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEA-LNRGFEVTAVVRHPEKIKI-ENEHL----K---VKKADVSSLDEVCEVCKGADAVISAF 75 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHH-HTTTCEEEEECSCGGGCCC-CCTTE----E---EECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CEEEEEcCCchHHHHHHHHH-HHCCCEEEEEEcCcccchh-ccCce----E---EEEecCCCHHHHHHHhcCCCEEEEeC
Confidence 6899999 599999999998 5779999999998654210 00000 0 00000111235677889999999887
Q ss_pred CCC
Q 019328 245 VLD 247 (342)
Q Consensus 245 plt 247 (342)
...
T Consensus 76 ~~~ 78 (227)
T 3dhn_A 76 NPG 78 (227)
T ss_dssp CC-
T ss_pred cCC
Confidence 644
No 434
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.05 E-value=0.031 Score=52.26 Aligned_cols=95 Identities=13% Similarity=0.132 Sum_probs=59.4
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcC--CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCcccccc-CC-HHHHhh--cC
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA-SS-MDEVLR--EA 237 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-l~ell~--~s 237 (342)
.|.+|.|+|.|.||...++.+ +.+ |++|++.+++.++.. +..+++ ......... .+ .+++.. ..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqla-k~~~~Ga~Vi~~~~~~~~~~--~~~~lG-------a~~vi~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQIL-KALMKNITIVGISRSKKHRD--FALELG-------ADYVSEMKDAESLINKLTDGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHH-HHHCTTCEEEEECSCHHHHH--HHHHHT-------CSEEECHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHhcCCCEEEEEeCCHHHHH--HHHHhC-------CCEEeccccchHHHHHhhcCCCc
Confidence 688999999999999999985 788 999999998765432 112222 100000000 01 122221 57
Q ss_pred CEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
|+|+-++.... + -...++.++++..++.++.
T Consensus 240 D~vid~~g~~~-~----~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 240 SIAIDLVGTEE-T----TYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EEEEESSCCHH-H----HHHHHHHEEEEEEEEECCC
T ss_pred cEEEECCCChH-H----HHHHHHHhhcCCEEEEeCC
Confidence 99998887321 1 2446677888888887763
No 435
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.05 E-value=0.14 Score=50.06 Aligned_cols=88 Identities=16% Similarity=0.224 Sum_probs=60.5
Q ss_pred cccCCCEEEEEccC----------hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCH
Q 019328 161 NLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (342)
Q Consensus 161 ~~l~gktvGIiG~G----------~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (342)
..+.|++|+|+|+. .=...+++.| ...|++|.+|||...+.... .++ .......++
T Consensus 329 ~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L-~~~Ga~V~~~DP~~~~~~~~---~~~----------~~~~~~~~~ 394 (444)
T 3vtf_A 329 GGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLL-LERGARVYVHDPMAMEKARA---VLG----------DSVTYVEDP 394 (444)
T ss_dssp TCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHH-HHTTCEEEEECSSTHHHHHH---HHG----------GGSEECSCH
T ss_pred cccCCCEEEEEeeecCCCCCccccCcHHHHHHHH-HHCCCEEEEECCCCChHHHH---hcC----------CCceecCCH
Confidence 36899999999986 1267888987 68999999999986432211 111 112335689
Q ss_pred HHHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEec
Q 019328 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (342)
Q Consensus 231 ~ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~ 271 (342)
+++++++|.|+++.+- ++-+.+ + + ++.+++++
T Consensus 395 ~~a~~~aDavvi~t~h-~ef~~l-d------~-~~~vv~D~ 426 (444)
T 3vtf_A 395 QALLDQVEGVIIATAW-PQYEGL-D------Y-RGKVVVDG 426 (444)
T ss_dssp HHHHHHCSEEEECSCC-GGGGGS-C------C-TTCEEEES
T ss_pred HHHHhCCCEEEEccCC-HHHhCC-C------c-CCCEEEEC
Confidence 9999999999999873 232222 1 2 36678875
No 436
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=94.03 E-value=3.8 Score=38.07 Aligned_cols=101 Identities=13% Similarity=0.109 Sum_probs=67.6
Q ss_pred ccCCCEEEE-----EccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc
Q 019328 162 LLKGQTVGV-----IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (342)
Q Consensus 162 ~l~gktvGI-----iG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (342)
.+. .+|++ +|=+++.++.+..+ ..||++|....|..-...+... .......++++.+++
T Consensus 166 ~l~-l~ia~a~~~~vGD~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~--------------~~~~~~~d~~eav~~ 229 (324)
T 1js1_X 166 RPK-VVMTWAPHPRPLPQAVPNSFAEWM-NATDYEFVITHPEGYELDPKFV--------------GNARVEYDQMKAFEG 229 (324)
T ss_dssp SCE-EEEECCCCSSCCCSHHHHHHHHHH-HTSSSEEEEECCTTCCCCHHHH--------------TTCEEESCHHHHHTT
T ss_pred Cee-EEEEEEcccccCCcchHHHHHHHH-HHCCCEEEEeCCcccCCChhhc--------------cceEEECCHHHHhCC
Confidence 466 89999 99999999999997 6899999998875321101100 012335789999999
Q ss_pred CCEEEEcCCCC--c------c---cccccCHhHHccCCCCcEEEecC---CCccCCH
Q 019328 237 ADVISLHPVLD--K------T---TYHLINKERLATMKKEAILVNCS---RGPVIDE 279 (342)
Q Consensus 237 sDiV~l~lplt--~------~---t~~li~~~~l~~mk~gailIN~s---RG~~vd~ 279 (342)
+|+|..-.-.. . . ..-.++.+.++.+| +++|.-+. ||.=|+.
T Consensus 230 aDvvy~~~w~s~g~~~~~~~~~r~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~ 285 (324)
T 1js1_X 230 ADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMAVTN-NAYFMHCLPVRRNMIVTD 285 (324)
T ss_dssp CSEEEECCCCCCSTTCTTCCCCCCTTSSBCHHHHTTSS-SCEEECCSCCCBTTTBCH
T ss_pred CCEEEecCcccCCCccccchHHHhcCcccCHHHHHhcC-CcEEECCCCCCCCcccCH
Confidence 99998843311 0 0 12345778888888 77777664 4554443
No 437
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=94.00 E-value=0.12 Score=46.56 Aligned_cols=40 Identities=23% Similarity=0.152 Sum_probs=34.0
Q ss_pred cccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhh
Q 019328 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (342)
Q Consensus 161 ~~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~ 201 (342)
..+.||++-|.|- |.||+.+|+.|+ ..|++|+..+++...
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~ 65 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELG-RRGCKVIVNYANSTE 65 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchH
Confidence 4578999999986 899999999984 679999999887643
No 438
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=93.97 E-value=0.41 Score=45.20 Aligned_cols=110 Identities=14% Similarity=0.139 Sum_probs=65.9
Q ss_pred cccCCCEEEEEccC-hHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 161 NLLKGQTVGVIGAG-RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 161 ~~l~gktvGIiG~G-~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
..|.|++|++||=| ++.++.+..+ ..||++|.+..|..-...+.+.+.... .......+.......+++|.++++|+
T Consensus 184 ~~l~glkva~vGD~~nva~Sl~~~l-~~lG~~v~~~~P~~~~~~~~i~~~~~~-~a~~~~~g~~~~~~~d~~eav~~aDV 261 (353)
T 3sds_A 184 LGLEGLKIAWVGDANNVLFDLAIAA-TKMGVNVAVATPRGYEIPSHIVELIQK-AREGVQSPGNLTQTTVPEVAVKDADV 261 (353)
T ss_dssp CSCTTCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTCCCCHHHHHHHHH-HHTTCSSCCCEEEESCHHHHTTTCSE
T ss_pred cccCCCEEEEECCCchHHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHH-hhhhccCCCeEEEECCHHHHhcCCCE
Confidence 46899999999975 5677777776 589999999887532101111110000 00000111223345799999999999
Q ss_pred EEEcC--CCCccc----------ccccCHhHHcc--CCCCcEEEecC
Q 019328 240 ISLHP--VLDKTT----------YHLINKERLAT--MKKEAILVNCS 272 (342)
Q Consensus 240 V~l~l--plt~~t----------~~li~~~~l~~--mk~gailIN~s 272 (342)
|..-. +...+. .--++.+.++. +|++++|.-+.
T Consensus 262 vytd~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 262 IVTDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp EEECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred EEeCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 98743 222111 12468888888 88888888764
No 439
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.96 E-value=0.06 Score=51.12 Aligned_cols=95 Identities=16% Similarity=0.122 Sum_probs=58.8
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccc---cCCHHH----Hhh
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDE----VLR 235 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~e----ll~ 235 (342)
.|.+|.|+|.|.+|...++.+ +.+| .+|++.+++.++.. +..+++ ........ ..++.+ +..
T Consensus 195 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~~~~lG-------a~~vi~~~~~~~~~~~~~v~~~~~ 264 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIA-RSLGAENVIVIAGSPNRLK--LAEEIG-------ADLTLNRRETSVEERRKAIMDITH 264 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHH-HHTTBSEEEEEESCHHHHH--HHHHTT-------CSEEEETTTSCHHHHHHHHHHHTT
T ss_pred CCCEEEEECcCHHHHHHHHHH-HHcCCceEEEEcCCHHHHH--HHHHcC-------CcEEEeccccCcchHHHHHHHHhC
Confidence 478999999999999999985 8999 59999998865432 112222 10000000 011211 211
Q ss_pred --cCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 236 --EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 236 --~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
..|+|+-++..... -...++.++++..++.++.
T Consensus 265 g~g~Dvvid~~g~~~~-----~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 265 GRGADFILEATGDSRA-----LLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp TSCEEEEEECSSCTTH-----HHHHHHHEEEEEEEEECCC
T ss_pred CCCCcEEEECCCCHHH-----HHHHHHHHhcCCEEEEEec
Confidence 47888888763221 2446677888888888764
No 440
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.95 E-value=0.077 Score=49.51 Aligned_cols=94 Identities=13% Similarity=0.069 Sum_probs=60.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHH----Hh--hc
Q 019328 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE----VL--RE 236 (342)
Q Consensus 164 ~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e----ll--~~ 236 (342)
.|++|.|+|. |.||..+++.+ +.+|++|++.+++..+... ...++. .........++.+ +. ..
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a-~~~G~~Vi~~~~~~~~~~~--~~~~ga-------~~~~d~~~~~~~~~~~~~~~~~~ 235 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIA-KLFGARVIATAGSEDKLRR--AKALGA-------DETVNYTHPDWPKEVRRLTGGKG 235 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHH-HHTTCEEEEEESSHHHHHH--HHHHTC-------SEEEETTSTTHHHHHHHHTTTTC
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCCEEEEEeCCHHHHHH--HHhcCC-------CEEEcCCcccHHHHHHHHhCCCC
Confidence 5889999999 99999999985 7899999999988654321 112211 0000001112222 22 25
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+|+.+.. .+ .-...++.|+++..++.++.
T Consensus 236 ~d~vi~~~g-~~-----~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 236 ADKVVDHTG-AL-----YFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp EEEEEESSC-SS-----SHHHHHHHEEEEEEEEESSC
T ss_pred ceEEEECCC-HH-----HHHHHHHhhccCCEEEEEec
Confidence 788888876 22 23556778888888888874
No 441
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.95 E-value=0.071 Score=49.29 Aligned_cols=94 Identities=13% Similarity=0.097 Sum_probs=60.1
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHH-HHh-----hc
Q 019328 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD-EVL-----RE 236 (342)
Q Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-ell-----~~ 236 (342)
.|++|.|.| .|.||..+++.+ +..|++|++.+++...... ...++. .........++. ++. ..
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a-~~~G~~V~~~~~~~~~~~~--~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~ 209 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWA-KALGAKLIGTVGTAQKAQS--ALKAGA-------WQVINYREEDLVERLKEITGGKK 209 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHHTCEEEEEESSHHHHHH--HHHHTC-------SEEEETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHHH--HHHcCC-------CEEEECCCccHHHHHHHHhCCCC
Confidence 488999999 799999999986 7889999999988654211 111111 000000112222 222 14
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+++.+.. .++ -...++.|+++..++.++.
T Consensus 210 ~D~vi~~~g--~~~----~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 210 VRVVYDSVG--RDT----WERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEEEECSC--GGG----HHHHHHTEEEEEEEEECCC
T ss_pred ceEEEECCc--hHH----HHHHHHHhcCCCEEEEEec
Confidence 789988876 322 2567788899989988864
No 442
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=93.93 E-value=0.12 Score=46.77 Aligned_cols=38 Identities=18% Similarity=0.181 Sum_probs=33.3
Q ss_pred ccCCCEEEEEcc---ChHHHHHHHHHHhcCCcEEEEEcCChh
Q 019328 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 162 ~l~gktvGIiG~---G~IG~~vA~~l~~a~g~~V~~~d~~~~ 200 (342)
.+.||++-|.|- |.||+.+|+.|+ ..|++|+..+|+..
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~ 58 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFH-REGAQLAFTYATPK 58 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEESSGG
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHH-HcCCEEEEEeCCHH
Confidence 488999999998 699999999984 67999999998763
No 443
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=93.91 E-value=0.042 Score=51.98 Aligned_cols=31 Identities=19% Similarity=0.431 Sum_probs=24.2
Q ss_pred CEEEEEc-cChHHHHHHHHHHhcCCcEEEEEc
Q 019328 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYD 196 (342)
Q Consensus 166 ktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d 196 (342)
.+|||+| +|.||+.+.+.|...=.+++.+..
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~ 36 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS 36 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence 5899999 899999999987433346777663
No 444
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=93.90 E-value=0.1 Score=46.57 Aligned_cols=37 Identities=24% Similarity=0.202 Sum_probs=31.3
Q ss_pred ccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEE-cCCh
Q 019328 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYY-DLYQ 199 (342)
Q Consensus 162 ~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~-d~~~ 199 (342)
++.||++-|.|- |.||+.+|++|+ .-|++|+.. ++..
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~ 43 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFA-QEGANVVLTYNGAA 43 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSSC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCH
Confidence 688999999997 789999999985 779999987 4443
No 445
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.90 E-value=0.045 Score=49.32 Aligned_cols=70 Identities=9% Similarity=0.096 Sum_probs=45.4
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhc-CCEEEE
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE-ADVISL 242 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~-sDiV~l 242 (342)
.+++|.|.|.|.||+.+++.| ..-|.+|++.+|+...... .+ ...........+++++++. +|+|+.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L-~~~g~~V~~~~r~~~~~~~----~~-------~~~~~Dl~d~~~~~~~~~~~~d~vih 69 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRL-TAQGHEVTGLRRSAQPMPA----GV-------QTLIADVTRPDTLASIVHLRPEILVY 69 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHH-HHTTCCEEEEECTTSCCCT----TC-------CEEECCTTCGGGCTTGGGGCCSEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCcccccc----CC-------ceEEccCCChHHHHHhhcCCCCEEEE
Confidence 367899999999999999998 4679999999987543100 00 0000001112345566766 999987
Q ss_pred cCC
Q 019328 243 HPV 245 (342)
Q Consensus 243 ~lp 245 (342)
+..
T Consensus 70 ~a~ 72 (286)
T 3gpi_A 70 CVA 72 (286)
T ss_dssp CHH
T ss_pred eCC
Confidence 754
No 446
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.79 E-value=0.046 Score=50.59 Aligned_cols=93 Identities=13% Similarity=0.131 Sum_probs=63.0
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCC-HHHHhhcCCEEE
Q 019328 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS-MDEVLREADVIS 241 (342)
Q Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ell~~sDiV~ 241 (342)
.|.+|.|+| .|.+|...++.+ +.+|++|++.++..+ .++..+++. .........+ +.+.+...|+|+
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a-~~~Ga~vi~~~~~~~---~~~~~~lGa-------~~~i~~~~~~~~~~~~~g~D~v~ 220 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLA-KQKGTTVITTASKRN---HAFLKALGA-------EQCINYHEEDFLLAISTPVDAVI 220 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEECHHH---HHHHHHHTC-------SEEEETTTSCHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHH-HHcCCEEEEEeccch---HHHHHHcCC-------CEEEeCCCcchhhhhccCCCEEE
Confidence 578999997 999999999985 899999998875332 222222221 1111111234 666667899999
Q ss_pred EcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 242 l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
-++.. +. + ...++.++++..++.++.
T Consensus 221 d~~g~-~~----~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 221 DLVGG-DV----G-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp ESSCH-HH----H-HHHGGGEEEEEEEEECCS
T ss_pred ECCCc-HH----H-HHHHHhccCCCEEEEeCC
Confidence 98872 11 2 567888999999998864
No 447
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.77 E-value=0.099 Score=48.84 Aligned_cols=93 Identities=16% Similarity=0.224 Sum_probs=58.7
Q ss_pred CCCEEEEE-ccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-----cC
Q 019328 164 KGQTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (342)
Q Consensus 164 ~gktvGIi-G~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~s 237 (342)
.|++|.|+ |.|.||...++.+ +.+|++|++.+++..+.. +..+++. ... .....++.+.+. ..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~~~~lGa-------~~v-i~~~~~~~~~~~~~~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIA-KAYGLRVITTASRNETIE--WTKKMGA-------DIV-LNHKESLLNQFKTQGIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHH-HHTTCEEEEECCSHHHHH--HHHHHTC-------SEE-ECTTSCHHHHHHHHTCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHH--HHHhcCC-------cEE-EECCccHHHHHHHhCCCCc
Confidence 68999999 7999999999985 799999999999765432 1122221 100 111123333322 47
Q ss_pred CEEEEcCCCCcccccccCHhHHccCCCCcEEEecC
Q 019328 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 238 DiV~l~lplt~~t~~li~~~~l~~mk~gailIN~s 272 (342)
|+|+-++.. +. .-...++.++++..+|.++
T Consensus 219 Dvv~d~~g~-~~----~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 219 DYVFCTFNT-DM----YYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EEEEESSCH-HH----HHHHHHHHEEEEEEEEESS
T ss_pred cEEEECCCc-hH----HHHHHHHHhccCCEEEEEC
Confidence 888887662 11 1134567778888887764
No 448
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=93.74 E-value=0.066 Score=50.69 Aligned_cols=37 Identities=24% Similarity=0.396 Sum_probs=31.4
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCC
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY 198 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~ 198 (342)
..|.+++|.|||.|.+|..+|+.|+ ..|. ++..+|+.
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La-~aGvg~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILA-TSGIGEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HHTCSEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-hCCCCeEEEECCC
Confidence 4689999999999999999999985 5565 78888875
No 449
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=93.74 E-value=0.067 Score=50.53 Aligned_cols=93 Identities=15% Similarity=0.161 Sum_probs=56.6
Q ss_pred cccCCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChh------------------hHHHHHHhhhhhhhccCCCCC
Q 019328 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQP 221 (342)
Q Consensus 161 ~~l~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 221 (342)
..|.+++|.|||+|.+|.++|+.|+ ..|. ++..+|...- .+.+..... +..-. ..
T Consensus 32 ~~L~~~~VlivG~GGlG~~ia~~La-~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~----l~~ln-p~ 105 (346)
T 1y8q_A 32 KRLRASRVLLVGLKGLGAEIAKNLI-LAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLER----AQNLN-PM 105 (346)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHH----HHHTC-TT
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-HcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHH----HHhHC-CC
Confidence 4689999999999999999999985 4565 7888875421 011111111 11000 00
Q ss_pred cccc-c----cCCHHHHhhcCCEEEEcCCCCcccccccCHhHHc
Q 019328 222 VTWK-R----ASSMDEVLREADVISLHPVLDKTTYHLINKERLA 260 (342)
Q Consensus 222 ~~~~-~----~~~l~ell~~sDiV~l~lplt~~t~~li~~~~l~ 260 (342)
.... . ....+++++++|+|+.+.- +.+++..+++...+
T Consensus 106 v~v~~~~~~~~~~~~~~~~~~dvVv~~~d-~~~~r~~ln~~~~~ 148 (346)
T 1y8q_A 106 VDVKVDTEDIEKKPESFFTQFDAVCLTCC-SRDVIVKVDQICHK 148 (346)
T ss_dssp SEEEEECSCGGGCCHHHHTTCSEEEEESC-CHHHHHHHHHHHHH
T ss_pred eEEEEEecccCcchHHHhcCCCEEEEcCC-CHHHHHHHHHHHHH
Confidence 1010 0 0124678899999988764 67777777765444
No 450
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=93.73 E-value=0.045 Score=52.58 Aligned_cols=40 Identities=23% Similarity=0.532 Sum_probs=32.7
Q ss_pred ccccccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCCh
Q 019328 158 FVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQ 199 (342)
Q Consensus 158 ~~g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~ 199 (342)
+.+....+++|+|+|-|.+|+.+++.+ +.+|.+|+++| ++
T Consensus 17 ~~~~mm~~~~I~ilGgG~lg~~l~~aa-~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 17 FQGHMWNSRKVGVLGGGQLGRMLVESA-NRLNIQVNVLD-AD 56 (403)
T ss_dssp ----CCSCCEEEEECCSHHHHHHHHHH-HHHTCEEEEEE-ST
T ss_pred EeccCCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEE-CC
Confidence 445667799999999999999999996 78999999999 54
No 451
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=93.69 E-value=0.13 Score=44.74 Aligned_cols=73 Identities=18% Similarity=0.130 Sum_probs=48.6
Q ss_pred cCCCEEEEEc-cChHHHHHHHHHHhcC--CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc--cccccCCHHHHhhcC
Q 019328 163 LKGQTVGVIG-AGRIGSAYARMMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREA 237 (342)
Q Consensus 163 l~gktvGIiG-~G~IG~~vA~~l~~a~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~s 237 (342)
..++++.|.| .|.||+.+++.|+ .. |.+|++.+|++... +.. ....... ......+++++++..
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~-~~~~g~~V~~~~r~~~~~-~~~---------~~~~~~~~~D~~d~~~~~~~~~~~ 70 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLK-EGSDKFVAKGLVRSAQGK-EKI---------GGEADVFIGDITDADSINPAFQGI 70 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHH-HTTTTCEEEEEESCHHHH-HHT---------TCCTTEEECCTTSHHHHHHHHTTC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHH-hcCCCcEEEEEEcCCCch-hhc---------CCCeeEEEecCCCHHHHHHHHcCC
Confidence 3578999999 5999999999985 55 89999999986432 110 0000000 011123567788999
Q ss_pred CEEEEcCCC
Q 019328 238 DVISLHPVL 246 (342)
Q Consensus 238 DiV~l~lpl 246 (342)
|+|+.+...
T Consensus 71 d~vi~~a~~ 79 (253)
T 1xq6_A 71 DALVILTSA 79 (253)
T ss_dssp SEEEECCCC
T ss_pred CEEEEeccc
Confidence 999988654
No 452
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.64 E-value=0.31 Score=45.99 Aligned_cols=97 Identities=19% Similarity=0.180 Sum_probs=61.3
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh---hcCCE
Q 019328 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL---READV 239 (342)
Q Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell---~~sDi 239 (342)
.|++|.|.| .|.||..+++.+ +..|++|++.++ .++. ++..+++ ..........++.+.+ ...|+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla-~~~Ga~Vi~~~~-~~~~--~~~~~lG-------a~~v~~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVM-KAWDAHVTAVCS-QDAS--ELVRKLG-------ADDVIDYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEC-GGGH--HHHHHTT-------CSEEEETTSSCHHHHHHTSCCBSE
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HhCCCEEEEEeC-hHHH--HHHHHcC-------CCEEEECCchHHHHHHhhcCCCCE
Confidence 589999999 799999999985 789999998874 3221 1222222 1100001112333322 35899
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
|+-++.....+ -...++.++++..++.++...
T Consensus 252 vid~~g~~~~~----~~~~~~~l~~~G~iv~~g~~~ 283 (375)
T 2vn8_A 252 ILDNVGGSTET----WAPDFLKKWSGATYVTLVTPF 283 (375)
T ss_dssp EEESSCTTHHH----HGGGGBCSSSCCEEEESCCSH
T ss_pred EEECCCChhhh----hHHHHHhhcCCcEEEEeCCCc
Confidence 99988743111 134567899999999998543
No 453
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=93.63 E-value=0.51 Score=46.53 Aligned_cols=116 Identities=19% Similarity=0.225 Sum_probs=70.7
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEE--------cCCh--hhHHHHHHhhhhhhhccCCCCCccccccCCHH
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYY--------DLYQ--ATRLEKFVTAYGQFLKANGEQPVTWKRASSMD 231 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~--------d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (342)
+|.|+||.|-|+|++|+..|+.| ..+|++|++. |+.- ......+....+... ... +.....+ +
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L-~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~---~~~--~a~~~~~-~ 313 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYL-HRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTIL---GFP--KAKIYEG-S 313 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSST---TCT--TSEEECS-C
T ss_pred CcCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCee---ccc--Cceeecc-c
Confidence 68999999999999999999997 6899999873 2221 111222222111100 000 0111111 1
Q ss_pred HHhhcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccCCHHHHHHHHHcCCcc
Q 019328 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (342)
Q Consensus 232 ell~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~ 292 (342)
-+-..||+.+-|. +.+.|+.+...+++ -.+++--+.+.+ ..+| .+.|.+..|.
T Consensus 314 il~~~~DIliPcA-----~~n~I~~~na~~l~-akiV~EgAN~p~-T~eA-~~iL~~rGIl 366 (501)
T 3mw9_A 314 ILEVDCDILIPAA-----SEKQLTKSNAPRVK-AKIIAEGANGPT-TPEA-DKIFLERNIM 366 (501)
T ss_dssp GGGSCCSEEEECS-----SSCCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred cccccceEEeecc-----ccCccCHhHHHHcC-ceEEEeCCCCcC-CHHH-HHHHHHCCCE
Confidence 1235799988774 45778888888886 457888888874 5544 4566665553
No 454
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.63 E-value=0.077 Score=49.38 Aligned_cols=95 Identities=18% Similarity=0.185 Sum_probs=60.8
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc-cccccCCHHHHhh-----c
Q 019328 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSMDEVLR-----E 236 (342)
Q Consensus 164 ~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ell~-----~ 236 (342)
.|++|.|+|. |.||..+++.+ +..|++|++.+++..+.... ...++ .... ......++.+.+. .
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a-~~~G~~V~~~~~~~~~~~~~-~~~~g-------~~~~~d~~~~~~~~~~~~~~~~~~ 225 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLA-KMMGCYVVGSAGSKEKVDLL-KTKFG-------FDDAFNYKEESDLTAALKRCFPNG 225 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHHHHH-HHTSC-------CSEEEETTSCSCSHHHHHHHCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH-HHHcC-------CceEEecCCHHHHHHHHHHHhCCC
Confidence 5889999997 99999999986 78999999999876542111 10111 1000 0001123333332 4
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+|+.+... + .-...++.++++..++.++-
T Consensus 226 ~d~vi~~~g~-~-----~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 226 IDIYFENVGG-K-----MLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EEEEEESSCH-H-----HHHHHHTTEEEEEEEEECCC
T ss_pred CcEEEECCCH-H-----HHHHHHHHHhcCCEEEEEcc
Confidence 7999888762 2 23556788888888888764
No 455
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=93.62 E-value=0.055 Score=47.29 Aligned_cols=77 Identities=12% Similarity=0.145 Sum_probs=50.0
Q ss_pred cCCCEEEEEc-cChHHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 163 LKGQTVGVIG-AGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 163 l~gktvGIiG-~G~IG~~vA~~l~~a~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
+.+|++.|.| .|.||+.+++.|+ .-|. +|++.+|++........... ...........+++++++..|+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~-~~G~~~~V~~~~r~~~~~~~~~~~~~-------~~~~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEIL-EQGLFSKVTLIGRRKLTFDEEAYKNV-------NQEVVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHH-HHTCCSEEEEEESSCCCCCSGGGGGC-------EEEECCGGGGGGGGGGGSSCSE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHH-cCCCCCEEEEEEcCCCCccccccCCc-------eEEecCcCCHHHHHHHhcCCCE
Confidence 5688999999 5999999999984 6788 99999987643110000000 0000011123456778889999
Q ss_pred EEEcCCCC
Q 019328 240 ISLHPVLD 247 (342)
Q Consensus 240 V~l~lplt 247 (342)
|+.+....
T Consensus 88 vi~~ag~~ 95 (242)
T 2bka_A 88 GFCCLGTT 95 (242)
T ss_dssp EEECCCCC
T ss_pred EEECCCcc
Confidence 99987654
No 456
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=93.61 E-value=0.35 Score=45.70 Aligned_cols=101 Identities=13% Similarity=0.173 Sum_probs=59.2
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
+-.+||||| .|..|+++.++|..-=..++.......... ..+.+.+.. ++ ...... ..+.+++++++|+|++
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG-~~~~~~~p~-~~----~~l~~~-~~~~~~~~~~~Dvvf~ 84 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAG-KKLEEIFPS-TL----ENSILS-EFDPEKVSKNCDVLFT 84 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTT-SBHHHHCGG-GC----CCCBCB-CCCHHHHHHHCSEEEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCccccc-CChHHhChh-hc----cCceEE-eCCHHHhhcCCCEEEE
Confidence 456899997 599999999998533345666554322110 001011110 11 111111 1356666688999999
Q ss_pred cCCCCcccccccCHhHHccCCCCcEEEecCCCccCC
Q 019328 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (342)
Q Consensus 243 ~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~vd 278 (342)
|+|... ..+....+ .|+.+|+.|.--=.+
T Consensus 85 alp~~~------s~~~~~~~-~g~~VIDlSsdfRl~ 113 (351)
T 1vkn_A 85 ALPAGA------SYDLVREL-KGVKIIDLGADFRFD 113 (351)
T ss_dssp CCSTTH------HHHHHTTC-CSCEEEESSSTTTCS
T ss_pred CCCcHH------HHHHHHHh-CCCEEEECChhhhCC
Confidence 999443 34555666 799999998543333
No 457
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.59 E-value=0.13 Score=47.00 Aligned_cols=39 Identities=21% Similarity=0.202 Sum_probs=33.4
Q ss_pred cccCCCEEEEEcc-Ch--HHHHHHHHHHhcCCcEEEEEcCChh
Q 019328 161 NLLKGQTVGVIGA-GR--IGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 161 ~~l~gktvGIiG~-G~--IG~~vA~~l~~a~g~~V~~~d~~~~ 200 (342)
..+.||++-|.|. |. ||+.+|+.|+ ..|++|+..+++..
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la-~~G~~V~~~~r~~~ 68 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAR-EAGAELAFTYQGDA 68 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHH-HTTCEEEEEECSHH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEEcCCHH
Confidence 3689999999998 45 9999999984 78999999998853
No 458
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=93.57 E-value=0.094 Score=49.38 Aligned_cols=99 Identities=16% Similarity=0.196 Sum_probs=53.8
Q ss_pred CEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCCh---h--hHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQ---A--TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 166 ktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
.+|+|+| .|.+|+.+.++|...-..++..+..+. . +...+ .+.. ++ +..........+.+++++++|+
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~---~~p~-~~--~~~~~~v~~~~~~~~~~~~~Dv 78 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISD---LHPQ-LK--GIVELPLQPMSDISEFSPGVDV 78 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHH---HCGG-GT--TTCCCBEEEESSGGGTCTTCSE
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHH---hCcc-cc--CccceeEeccCCHHHHhcCCCE
Confidence 5899999 699999999997533456766553322 1 11110 0000 00 1001111110044555589999
Q ss_pred EEEcCCCCcccccccCHhHHccCCCCcEEEecCCCc
Q 019328 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (342)
Q Consensus 240 V~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~ 275 (342)
|++|+|... ++.+ -.. ..+.|+.+|+.|.--
T Consensus 79 vf~a~p~~~-s~~~-~~~---~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 79 VFLATAHEV-SHDL-APQ---FLEAGCVVFDLSGAF 109 (337)
T ss_dssp EEECSCHHH-HHHH-HHH---HHHTTCEEEECSSTT
T ss_pred EEECCChHH-HHHH-HHH---HHHCCCEEEEcCCcc
Confidence 999999322 1211 111 246799999987543
No 459
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.55 E-value=0.14 Score=48.85 Aligned_cols=100 Identities=20% Similarity=0.125 Sum_probs=60.9
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHH-H---hh--c
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE-V---LR--E 236 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e-l---l~--~ 236 (342)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++..+.. +..+++ ..........++.+ + .. .
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlA-k~~Ga~~Vi~~~~~~~~~~--~a~~lG-------a~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASA-RLLGAAVVIVGDLNPARLA--HAKAQG-------FEIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEESCHHHHH--HHHHTT-------CEEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCEEEEECCcHHHHHHHHHH-HHCCCCeEEEEcCCHHHHH--HHHHcC-------CcEEccCCcchHHHHHHHHhCCCC
Confidence 478999999999999999985 89999 7999998765432 122222 11010111112322 2 21 4
Q ss_pred CCEEEEcCCCCccc-----cc-----ccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTT-----YH-----LINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t-----~~-----li~~~~l~~mk~gailIN~sR 273 (342)
.|+|+-++...... .+ -.-...++.++++..++.++-
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 79999988743210 00 012456778888888887763
No 460
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.47 E-value=0.15 Score=45.55 Aligned_cols=70 Identities=13% Similarity=0.104 Sum_probs=46.2
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
.++|.|.|.|.||+.+++.| ..-|.+|++.+|+...... ... .+..... ....+++ +..+|+|+.+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L-~~~g~~V~~~~r~~~~~~~-~~~--------~~~~~~~-~D~~d~~--~~~~d~vi~~a 71 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRAL-APQGWRIIGTSRNPDQMEA-IRA--------SGAEPLL-WPGEEPS--LDGVTHLLIST 71 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHH-GGGTCEEEEEESCGGGHHH-HHH--------TTEEEEE-SSSSCCC--CTTCCEEEECC
T ss_pred cCcEEEECCcHHHHHHHHHH-HHCCCEEEEEEcChhhhhh-Hhh--------CCCeEEE-ecccccc--cCCCCEEEECC
Confidence 47899999999999999998 5679999999998754211 100 0100000 0122344 78899998887
Q ss_pred CCC
Q 019328 245 VLD 247 (342)
Q Consensus 245 plt 247 (342)
...
T Consensus 72 ~~~ 74 (286)
T 3ius_A 72 APD 74 (286)
T ss_dssp CCB
T ss_pred Ccc
Confidence 644
No 461
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.43 E-value=0.071 Score=50.10 Aligned_cols=95 Identities=13% Similarity=0.091 Sum_probs=57.6
Q ss_pred cCCCEEEEEccChHHHHH-HHHHH-hcCCcE-EEEEcCChh---hHHHHHHhhhhhhhccCCCCCccccccCCHHHHh--
Q 019328 163 LKGQTVGVIGAGRIGSAY-ARMMV-EGFKMN-LIYYDLYQA---TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-- 234 (342)
Q Consensus 163 l~gktvGIiG~G~IG~~v-A~~l~-~a~g~~-V~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-- 234 (342)
..+.+|.|+|.|.+|... ++. + +.+|++ |++.+++.+ +.. +..+++. ... .....++.++.
T Consensus 171 ~~~~~VlV~GaG~vG~~a~iql-a~k~~Ga~~Vi~~~~~~~~~~~~~--~~~~lGa-------~~v-~~~~~~~~~i~~~ 239 (357)
T 2b5w_A 171 WDPSSAFVLGNGSLGLLTLAML-KVDDKGYENLYCLGRRDRPDPTID--IIEELDA-------TYV-DSRQTPVEDVPDV 239 (357)
T ss_dssp CCCCEEEEECCSHHHHHHHHHH-HHCTTCCCEEEEEECCCSSCHHHH--HHHHTTC-------EEE-ETTTSCGGGHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHHHcCCcEEEEEeCCcccHHHHH--HHHHcCC-------ccc-CCCccCHHHHHHh
Confidence 345899999999999999 987 6 789997 999998765 321 1222221 000 01112333311
Q ss_pred h-cCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 235 R-EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 235 ~-~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
. ..|+|+-++... .+ -...++.++++..++.++-
T Consensus 240 ~gg~Dvvid~~g~~-~~----~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 240 YEQMDFIYEATGFP-KH----AIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp SCCEEEEEECSCCH-HH----HHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCCCh-HH----HHHHHHHHhcCCEEEEEeC
Confidence 1 468888777632 11 1345677778777777753
No 462
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=93.42 E-value=0.2 Score=48.95 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=31.6
Q ss_pred ccccCCCEEEEEccChHHHHHHHHHHhcCCcEEE-EEcC
Q 019328 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDL 197 (342)
Q Consensus 160 g~~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~-~~d~ 197 (342)
|.++.|+||.|-|+|++|+..|+.| ...|++|+ +.|.
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L-~e~GakvVavsD~ 271 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKL-IEKGAIVLTMSDS 271 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHH-HHHTCCBCCEECS
T ss_pred CCCccCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECC
Confidence 3479999999999999999999997 67899986 4553
No 463
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=93.42 E-value=0.15 Score=47.63 Aligned_cols=103 Identities=23% Similarity=0.283 Sum_probs=60.4
Q ss_pred CCEEEEEc-cChHHHHHHHHHHhcCC--cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccc---cCCHHHHhhcCC
Q 019328 165 GQTVGVIG-AGRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDEVLREAD 238 (342)
Q Consensus 165 gktvGIiG-~G~IG~~vA~~l~~a~g--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~ell~~sD 238 (342)
..+|+|+| .|.+|..++..|+ ..| .+|..+|....... . ... .... ....... ..++.+.++.||
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~-~~g~~~ev~l~Di~~~~~~-~--~dL----~~~~-~~~~v~~~~~t~d~~~al~gaD 78 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMK-MNPLVSVLHLYDVVNAPGV-T--ADI----SHMD-TGAVVRGFLGQQQLEAALTGMD 78 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHH-HCTTEEEEEEEESSSHHHH-H--HHH----HTSC-SSCEEEEEESHHHHHHHHTTCS
T ss_pred CCEEEEECCCChHHHHHHHHHH-hCCCCCEEEEEeCCCcHhH-H--HHh----hccc-ccceEEEEeCCCCHHHHcCCCC
Confidence 35899999 8999999999874 456 68999997654111 0 001 1101 1101111 235678899999
Q ss_pred EEEEcCCCCcccccc-------cC----H---hHHccCCCCcEEEecCCCccCCH
Q 019328 239 VISLHPVLDKTTYHL-------IN----K---ERLATMKKEAILVNCSRGPVIDE 279 (342)
Q Consensus 239 iV~l~lplt~~t~~l-------i~----~---~~l~~mk~gailIN~sRG~~vd~ 279 (342)
+|+++.+... ..+. .| . +.+....|.+++++.+ .++|.
T Consensus 79 vVi~~ag~~~-~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S--NPv~~ 130 (326)
T 1smk_A 79 LIIVPAGVPR-KPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS--NPVNS 130 (326)
T ss_dssp EEEECCCCCC-CSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC--SSHHH
T ss_pred EEEEcCCcCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CchHH
Confidence 9999976332 1111 11 1 1222335788999875 44555
No 464
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.39 E-value=0.2 Score=43.05 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=47.5
Q ss_pred EEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc--cccc-cCCHHHHhhcCCEEEE
Q 019328 167 TVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKR-ASSMDEVLREADVISL 242 (342)
Q Consensus 167 tvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~l~ell~~sDiV~l 242 (342)
+|.|.| .|.||+.+++.| ..-|.+|++.+|+....... .+.... .... ..++.++++++|+|+.
T Consensus 2 ~ilItGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~ 69 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSL-STTDYQIYAGARKVEQVPQY-----------NNVKAVHFDVDWTPEEMAKQLHGMDAIIN 69 (219)
T ss_dssp EEEEESTTSHHHHHHHHHH-TTSSCEEEEEESSGGGSCCC-----------TTEEEEECCTTSCHHHHHTTTTTCSEEEE
T ss_pred eEEEECCCCHHHHHHHHHH-HHCCCEEEEEECCccchhhc-----------CCceEEEecccCCHHHHHHHHcCCCEEEE
Confidence 688999 799999999998 57799999999987542100 000000 0111 2346677889999999
Q ss_pred cCCCCc
Q 019328 243 HPVLDK 248 (342)
Q Consensus 243 ~lplt~ 248 (342)
+.....
T Consensus 70 ~ag~~~ 75 (219)
T 3dqp_A 70 VSGSGG 75 (219)
T ss_dssp CCCCTT
T ss_pred CCcCCC
Confidence 887554
No 465
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=93.24 E-value=0.23 Score=46.29 Aligned_cols=92 Identities=12% Similarity=0.059 Sum_probs=59.9
Q ss_pred CEEEEE-ccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh------hcCC
Q 019328 166 QTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------READ 238 (342)
Q Consensus 166 ktvGIi-G~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~sD 238 (342)
+++.|. |.|.||...++.+ +.+|++|++.+++.++... ..+++. .........++.+.+ ...|
T Consensus 166 ~~vli~gg~g~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~~--~~~~Ga-------~~~~~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLA-KEEGFRPIVTVRRDEQIAL--LKDIGA-------AHVLNEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESCGGGHHH--HHHHTC-------SEEEETTSTTHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH--HHHcCC-------CEEEECCcHHHHHHHHHHhcCCCCc
Confidence 567665 8999999999985 7899999999987654321 122221 101011112333322 2699
Q ss_pred EEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 239 iV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
+|+-++.. +. + ...++.++++..++.++.
T Consensus 236 ~vid~~g~-~~----~-~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 236 IFLDAVTG-PL----A-SAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp EEEESSCH-HH----H-HHHHHHSCTTCEEEECCC
T ss_pred EEEECCCC-hh----H-HHHHhhhcCCCEEEEEec
Confidence 99998762 21 1 567889999999999973
No 466
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.14 E-value=0.13 Score=47.63 Aligned_cols=94 Identities=12% Similarity=0.085 Sum_probs=58.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHH----HHh--hc
Q 019328 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD----EVL--RE 236 (342)
Q Consensus 164 ~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----ell--~~ 236 (342)
.|+++.|.|. |.||+.+++.+ +..|++|++.+++...... ...++. .........++. +.. ..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a-~~~G~~Vi~~~~~~~~~~~--~~~~g~-------~~~~d~~~~~~~~~i~~~~~~~~ 214 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWA-RHLGATVIGTVSTEEKAET--ARKLGC-------HHTINYSTQDFAEVVREITGGKG 214 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHH-HHTTCEEEEEESSHHHHHH--HHHHTC-------SEEEETTTSCHHHHHHHHHTTCC
T ss_pred CCCEEEEECCccHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH--HHHcCC-------CEEEECCCHHHHHHHHHHhCCCC
Confidence 4789999995 99999999986 7899999999998643211 111211 000000111222 222 14
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+++.+... + .-...++.++++..++.++.
T Consensus 215 ~d~vi~~~g~--~----~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 215 VDVVYDSIGK--D----TLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EEEEEECSCT--T----THHHHHHTEEEEEEEEECCC
T ss_pred CeEEEECCcH--H----HHHHHHHhhccCCEEEEEec
Confidence 6888887763 1 23566778888888888763
No 467
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.10 E-value=0.2 Score=48.97 Aligned_cols=108 Identities=12% Similarity=0.125 Sum_probs=63.4
Q ss_pred CCEEEEEccChHHHHHHHHHHh---------cCCcEEE-EEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh
Q 019328 165 GQTVGVIGAGRIGSAYARMMVE---------GFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL 234 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~---------a~g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell 234 (342)
-.+|||+|+|.||+.+++.+.+ +.+.+|. ++|++.... ..+.. ....+.++++++
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~-~~~~~--------------~~~~~~d~~ell 74 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKA-EALAG--------------GLPLTTNPFDVV 74 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHH-HHHHT--------------TCCEESCTHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHh-hhhcc--------------cCcccCCHHHHh
Confidence 3589999999999999876531 2567765 557765432 11100 112356899999
Q ss_pred h--cCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccC-CHHHHHHHHHcCCc
Q 019328 235 R--EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI-DEVALVEHLKQNPM 291 (342)
Q Consensus 235 ~--~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~v-d~~aL~~aL~~g~i 291 (342)
+ +.|+|+.++|.+...+.+ ..+.++.|.-++..--+... +-+.|.++.++...
T Consensus 75 ~d~diDvVve~tp~~~~h~~~----~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv 130 (444)
T 3mtj_A 75 DDPEIDIVVELIGGLEPAREL----VMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGV 130 (444)
T ss_dssp TCTTCCEEEECCCSSTTHHHH----HHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCEEEEcCCCchHHHHH----HHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCC
Confidence 6 579999999953222221 23445566555543222222 23567777666543
No 468
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.06 E-value=0.098 Score=50.80 Aligned_cols=115 Identities=17% Similarity=0.124 Sum_probs=68.7
Q ss_pred ccCCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCcccc-ccCCHHHHhhcCCEE
Q 019328 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK-RASSMDEVLREADVI 240 (342)
Q Consensus 162 ~l~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ell~~sDiV 240 (342)
++.||+|.|||+|..|.+.|+.| ...|.+|.++|.+...... .+++ .+. ... .... .+.+..+|.|
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l-~~~G~~v~~~D~~~~~~~~-------~~l~-~G~---~~~~g~~~-~~~~~~~d~v 68 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFF-LARGVTPRVMDTRMTPPGL-------DKLP-EAV---ERHTGSLN-DEWLMAADLI 68 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHH-HTTTCCCEEEESSSSCTTG-------GGSC-TTS---CEEESSCC-HHHHHTCSEE
T ss_pred CCCCCEEEEEeecHHHHHHHHHH-HhCCCEEEEEECCCCcchh-------HHhh-CCC---EEEECCCc-HHHhccCCEE
Confidence 36789999999999999999887 6889999999986543110 0121 121 111 1112 4556689999
Q ss_pred EEcCCC---Ccccc-------cccCHh--HHccCCCCcEEEecCCCccCCHHHHHHHHHcC
Q 019328 241 SLHPVL---DKTTY-------HLINKE--RLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (342)
Q Consensus 241 ~l~lpl---t~~t~-------~li~~~--~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g 289 (342)
++.-.. +|... .++.+- ....++...+-|-=+.|..--..-|...|++.
T Consensus 69 V~s~gi~~~~p~~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~ 129 (439)
T 2x5o_A 69 VASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAA 129 (439)
T ss_dssp EECTTSCTTCHHHHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred EeCCCCCCCCHHHHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 887322 22211 233331 12235545555655677776566666667653
No 469
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=93.04 E-value=0.34 Score=43.40 Aligned_cols=31 Identities=32% Similarity=0.592 Sum_probs=23.8
Q ss_pred EEEEEcc-ChHHHHHHHHHHhcCCcEEEE-EcC
Q 019328 167 TVGVIGA-GRIGSAYARMMVEGFKMNLIY-YDL 197 (342)
Q Consensus 167 tvGIiG~-G~IG~~vA~~l~~a~g~~V~~-~d~ 197 (342)
+|+|+|. |.||+.+++.+...-++++.+ +|+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 7999995 999999999863334888764 443
No 470
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=93.02 E-value=0.29 Score=45.06 Aligned_cols=105 Identities=13% Similarity=0.162 Sum_probs=57.7
Q ss_pred CEEEEEccChHHHHHHHHHH-hcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMV-EGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~-~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l~l 244 (342)
.+|+|||.|.||+.+|-.|+ +++--++..||.......-.-.| .......-.. ........+. +.++.||+|++..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~D-L~h~~~~~~~-~~~i~~~~d~-~~~~~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMD-LAHAAAGIDK-YPKIVGGADY-SLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHH-HHHHHGGGTC-CCEEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhh-hhcccccCCC-CCeEecCCCH-HHhCCCCEEEEec
Confidence 47999999999999998763 34445899999986432111111 1000000000 0011112233 4679999999984
Q ss_pred --CCCc-ccccc-c--CH-------hHHccCCCCcEEEecCC
Q 019328 245 --VLDK-TTYHL-I--NK-------ERLATMKKEAILVNCSR 273 (342)
Q Consensus 245 --plt~-~t~~l-i--~~-------~~l~~mk~gailIN~sR 273 (342)
|..| .||.- + |. +.+..-.|+++++.++.
T Consensus 78 G~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 78 GLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp CCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 5444 23321 2 22 23444567888887754
No 471
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=93.02 E-value=0.23 Score=45.72 Aligned_cols=124 Identities=15% Similarity=0.168 Sum_probs=65.1
Q ss_pred CEEEEEc-cChHHHHHHHHHHh-cCCcEEEEEcC--ChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 166 QTVGVIG-AGRIGSAYARMMVE-GFKMNLIYYDL--YQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 166 ktvGIiG-~G~IG~~vA~~l~~-a~g~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
.+|+|+| .|.+|..++..|+. +...++..+|+ .... .+........... ......... .+ .+.++.||+|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~-~~~~~~dl~~~~~--~~~~~~v~~-~~-~~a~~~aDvVi 75 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDD-TVGQAADTNHGIA--YDSNTRVRQ-GG-YEDTAGSDVVV 75 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHH-HHHHHHHHHHHHT--TTCCCEEEE-CC-GGGGTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhh-HHHHHHHHHHHHh--hCCCcEEEe-CC-HHHhCCCCEEE
Confidence 3799999 99999999998743 22237888998 5432 1111111110000 001111111 23 56789999999
Q ss_pred EcCCCCcccccc-----c--C----H---hHHccCCCCcEEEecCCCccCCHHHHHHH--HHcCCccEEE
Q 019328 242 LHPVLDKTTYHL-----I--N----K---ERLATMKKEAILVNCSRGPVIDEVALVEH--LKQNPMFRVG 295 (342)
Q Consensus 242 l~lplt~~t~~l-----i--~----~---~~l~~mk~gailIN~sRG~~vd~~aL~~a--L~~g~i~gaa 295 (342)
++..... ..++ + | . +.+....|.+++++++---=+....+.+. +...++.|.|
T Consensus 76 ~~ag~~~-~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~~~~~~~p~~rviG~g 144 (303)
T 1o6z_A 76 ITAGIPR-QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRSREQVIGFG 144 (303)
T ss_dssp ECCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHHHHHHSSSCGGGEEECC
T ss_pred EcCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHcCCCHHHeeecc
Confidence 9975332 1111 0 1 1 23344578899999744322223333333 3334666663
No 472
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=93.00 E-value=0.13 Score=46.63 Aligned_cols=39 Identities=23% Similarity=0.228 Sum_probs=31.6
Q ss_pred ccccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCCh
Q 019328 160 GNLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (342)
Q Consensus 160 g~~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~ 199 (342)
..++.||++-|.|- |.||+.+|+.|+ ..|++|+..+|+.
T Consensus 18 ~~~l~~k~~lVTGas~gIG~aia~~L~-~~G~~V~~~~r~~ 57 (288)
T 2x9g_A 18 GSHMEAPAAVVTGAAKRIGRAIAVKLH-QTGYRVVIHYHNS 57 (288)
T ss_dssp ----CCCEEEETTCSSHHHHHHHHHHH-HHTCEEEEEESSC
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHH-HCCCeEEEEeCCc
Confidence 35689999999986 899999999985 6799999999886
No 473
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=92.98 E-value=0.12 Score=48.47 Aligned_cols=94 Identities=11% Similarity=-0.032 Sum_probs=60.7
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHH-Hh-----hc
Q 019328 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE-VL-----RE 236 (342)
Q Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e-ll-----~~ 236 (342)
.|++|.|.| .|.||..+++.+ +..|++|++.+++.++... ...++. .........++.+ +. ..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~--~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~ 231 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLT-RMAGAIPLVTAGSQKKLQM--AEKLGA-------AAGFNYKKEDFSEATLKFTKGAG 231 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESCHHHHHH--HHHHTC-------SEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCccHHHHHHHHHH-HHcCCEEEEEeCCHHHHHH--HHHcCC-------cEEEecCChHHHHHHHHHhcCCC
Confidence 488999999 799999999986 7899999999988654321 122211 0000001122222 22 14
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+++.+... + .-...++.|+++..++.++.
T Consensus 232 ~d~vi~~~G~-~-----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 232 VNLILDCIGG-S-----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEEEESSCG-G-----GHHHHHHHEEEEEEEEECCC
T ss_pred ceEEEECCCc-h-----HHHHHHHhccCCCEEEEEec
Confidence 7999888763 1 12456788999999999874
No 474
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=92.97 E-value=0.11 Score=48.65 Aligned_cols=116 Identities=16% Similarity=0.164 Sum_probs=62.6
Q ss_pred CEEEEEccChHHHHHHHHHHhc-----C--CcEEE-EEcCChhhHHH-----HHHhhhhhhhccCCCCCccccccC---C
Q 019328 166 QTVGVIGAGRIGSAYARMMVEG-----F--KMNLI-YYDLYQATRLE-----KFVTAYGQFLKANGEQPVTWKRAS---S 229 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a-----~--g~~V~-~~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~ 229 (342)
.+|||||+|.||+.+++.+.+. . +++|. ++|++.....+ .+.+.+. . . ... .... +
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~----~-~--~~~-~~~~~~~d 78 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKE----K-G--SLD-SLEYESIS 78 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHH----T-T--CGG-GCCSEECC
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhc----c-C--Ccc-cccCCCCC
Confidence 4799999999999999886421 1 36664 56776532110 0100000 0 0 000 0123 7
Q ss_pred HHHHh-hcCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCCccC-CHHHHHHHHHcCC
Q 019328 230 MDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI-DEVALVEHLKQNP 290 (342)
Q Consensus 230 l~ell-~~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG~~v-d~~aL~~aL~~g~ 290 (342)
+++++ ...|+|+.|+|.. .|-+.--+-..+.++.|.-+|...-..+. +-+.|.++.++..
T Consensus 79 ~~~ll~~~iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~g 140 (331)
T 3c8m_A 79 ASEALARDFDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNN 140 (331)
T ss_dssp HHHHHHSSCSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcC
Confidence 88887 3589999999964 22111112344556667666654333332 3356666655543
No 475
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=92.96 E-value=0.19 Score=49.66 Aligned_cols=114 Identities=18% Similarity=0.188 Sum_probs=68.8
Q ss_pred CCCEEEEEccChHHHH-HHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEEE
Q 019328 164 KGQTVGVIGAGRIGSA-YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~-vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~l 242 (342)
..|+|-|||+|.+|.+ +|+.| +..|++|.++|....+..+.+ +..+. ....-.+. +.+..+|+|++
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l-~~~G~~V~~~D~~~~~~~~~l--------~~~gi---~~~~g~~~-~~~~~~d~vV~ 87 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVL-ANEGYQISGSDLAPNSVTQHL--------TALGA---QIYFHHRP-ENVLDASVVVV 87 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHH-HHTTCEEEEECSSCCHHHHHH--------HHTTC---EEESSCCG-GGGTTCSEEEE
T ss_pred cCCEEEEEEEcHhhHHHHHHHH-HhCCCeEEEEECCCCHHHHHH--------HHCCC---EEECCCCH-HHcCCCCEEEE
Confidence 3589999999999996 89987 689999999998755432221 11111 11111122 34567999988
Q ss_pred c--CCC-Cccc-----c--cccCH-hHHcc-CCCC-cEEEecCCCccCCHHHHHHHHHcCC
Q 019328 243 H--PVL-DKTT-----Y--HLINK-ERLAT-MKKE-AILVNCSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 243 ~--lpl-t~~t-----~--~li~~-~~l~~-mk~g-ailIN~sRG~~vd~~aL~~aL~~g~ 290 (342)
. +|. +|+. + .++++ +.|.. ++.. .+-|-=+.|..--..-+...|+...
T Consensus 88 Spgi~~~~p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 148 (494)
T 4hv4_A 88 STAISADNPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAG 148 (494)
T ss_dssp CTTSCTTCHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcC
Confidence 7 443 2221 1 13333 33333 3432 3555556888877778888888654
No 476
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=92.88 E-value=0.14 Score=48.02 Aligned_cols=93 Identities=17% Similarity=0.179 Sum_probs=59.0
Q ss_pred CEEEEEcc-ChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-----cCC
Q 019328 166 QTVGVIGA-GRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EAD 238 (342)
Q Consensus 166 ktvGIiG~-G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~sD 238 (342)
++|.|.|. |.||+.+++.+ +..|+ +|++.+++...... ....++ ..........++.+.+. ..|
T Consensus 162 ~~vlI~GasggiG~~~~~~a-~~~Ga~~Vi~~~~~~~~~~~-~~~~~g-------~~~~~d~~~~~~~~~~~~~~~~~~d 232 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIG-HFLGCSRVVGICGTHEKCIL-LTSELG-------FDAAINYKKDNVAEQLRESCPAGVD 232 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHH-HHTTCSEEEEEESCHHHHHH-HHHTSC-------CSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred cEEEEECCCcHHHHHHHHHH-HHCCCCeEEEEeCCHHHHHH-HHHHcC-------CceEEecCchHHHHHHHHhcCCCCC
Confidence 89999998 99999999986 78999 99999987643211 111111 10000011123333322 478
Q ss_pred EEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 239 iV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
+++.+... + .-...++.++++..++.++.
T Consensus 233 ~vi~~~G~--~----~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 233 VYFDNVGG--N----ISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp EEEESCCH--H----HHHHHHHTEEEEEEEEECCC
T ss_pred EEEECCCH--H----HHHHHHHHhccCcEEEEECC
Confidence 88888761 1 23567788888888888764
No 477
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.87 E-value=0.13 Score=48.99 Aligned_cols=99 Identities=15% Similarity=0.055 Sum_probs=60.7
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCH-HH-H---hh--
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM-DE-V---LR-- 235 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~e-l---l~-- 235 (342)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++.++.. +..+++ .. .......++ .+ + ..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~a~~lG-------a~-~i~~~~~~~~~~~~~~~~~g~ 253 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGA-RLLGAACVIVGDQNPERLK--LLSDAG-------FE-TIDLRNSAPLRDQIDQILGKP 253 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCSEEEEEESCHHHHH--HHHTTT-------CE-EEETTSSSCHHHHHHHHHSSS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCCHHHHH--HHHHcC-------Cc-EEcCCCcchHHHHHHHHhCCC
Confidence 588999999999999999985 78999 9999998865431 122222 10 000111222 22 2 21
Q ss_pred cCCEEEEcCCCCcc-----ccc----ccCHhHHccCCCCcEEEecCC
Q 019328 236 EADVISLHPVLDKT-----TYH----LINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 236 ~sDiV~l~lplt~~-----t~~----li~~~~l~~mk~gailIN~sR 273 (342)
..|+|+-++..... ..+ -.-...++.++++..++.++-
T Consensus 254 g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 254 EVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp CEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred CCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 47999999874320 000 012456777888888887764
No 478
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=92.85 E-value=0.19 Score=45.37 Aligned_cols=73 Identities=18% Similarity=0.143 Sum_probs=47.2
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc--cccccCCHHHHhhcCCEE
Q 019328 165 GQTVGVIGA-GRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVI 240 (342)
Q Consensus 165 gktvGIiG~-G~IG~~vA~~l~~a~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~sDiV 240 (342)
.++|.|.|. |.||+.+++.|. .-| .+|.+.+|++......... ..+.... ......++.++++.+|+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~-~~g~~~V~~~~R~~~~~~~~~l~-------~~~~~~~~~D~~d~~~l~~~~~~~d~v 76 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLL-EDGTFKVRVVTRNPRKKAAKELR-------LQGAEVVQGDQDDQVIMELALNGAYAT 76 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-HHCSSEEEEEESCTTSHHHHHHH-------HTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCchHHHHHHHHHH-hcCCceEEEEEcCCCCHHHHHHH-------HCCCEEEEecCCCHHHHHHHHhcCCEE
Confidence 578999998 999999999984 557 8999999886532111000 0010000 011123567788999999
Q ss_pred EEcCC
Q 019328 241 SLHPV 245 (342)
Q Consensus 241 ~l~lp 245 (342)
+.+.+
T Consensus 77 i~~a~ 81 (299)
T 2wm3_A 77 FIVTN 81 (299)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 98865
No 479
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.84 E-value=0.086 Score=48.67 Aligned_cols=73 Identities=11% Similarity=0.082 Sum_probs=46.0
Q ss_pred cccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCE
Q 019328 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (342)
Q Consensus 161 ~~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDi 239 (342)
..+.+|+|.|.|. |.||+.+++.| ..-|.+|++.+|..... . +. . .........+++++++.+|+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L-~~~G~~V~~~~r~~~~~--~----~~--~-----~~~Dl~d~~~~~~~~~~~d~ 80 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAAL-RTQGRTVRGFDLRPSGT--G----GE--E-----VVGSLEDGQALSDAIMGVSA 80 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHH-HHTTCCEEEEESSCCSS--C----CS--E-----EESCTTCHHHHHHHHTTCSE
T ss_pred cccCCCEEEEECCCChHHHHHHHHH-HhCCCEEEEEeCCCCCC--C----cc--E-----EecCcCCHHHHHHHHhCCCE
Confidence 5789999999998 99999999998 47799999999875420 0 00 0 00001112356778899999
Q ss_pred EEEcCCCC
Q 019328 240 ISLHPVLD 247 (342)
Q Consensus 240 V~l~lplt 247 (342)
|+.+....
T Consensus 81 vih~A~~~ 88 (347)
T 4id9_A 81 VLHLGAFM 88 (347)
T ss_dssp EEECCCCC
T ss_pred EEECCccc
Confidence 98876543
No 480
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=92.79 E-value=0.083 Score=49.61 Aligned_cols=104 Identities=15% Similarity=0.161 Sum_probs=60.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHH-HHHHhhhhhhhccCCCCCc--c-ccccCCHHHHhhcCC
Q 019328 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRL-EKFVTAYGQFLKANGEQPV--T-WKRASSMDEVLREAD 238 (342)
Q Consensus 164 ~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~--~-~~~~~~l~ell~~sD 238 (342)
.+++|.|.|. |.||+.+++.|+ .-|.+|++.+|+..... ..... ..+.... . .....++.++++.+|
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~l~~-------~~~v~~v~~D~l~d~~~l~~~~~~~d 75 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAA-AVGHHVRAQVHSLKGLIAEELQA-------IPNVTLFQGPLLNNVPLMDTLFEGAH 75 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHH-HTTCCEEEEESCSCSHHHHHHHT-------STTEEEEESCCTTCHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-hCCCEEEEEECCCChhhHHHHhh-------cCCcEEEECCccCCHHHHHHHHhcCC
Confidence 3678999995 999999999984 57899999988764321 11100 0000000 0 011234677889999
Q ss_pred EEEEcCCCCcccccccCHhHHccCCC-C--cEEEecCCCc
Q 019328 239 VISLHPVLDKTTYHLINKERLATMKK-E--AILVNCSRGP 275 (342)
Q Consensus 239 iV~l~lplt~~t~~li~~~~l~~mk~-g--ailIN~sRG~ 275 (342)
+|+.+...............++.++. | ..||++|...
T Consensus 76 ~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 76 LAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp EEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 99977653311112223444444432 3 4788887653
No 481
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.70 E-value=0.24 Score=46.10 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=60.5
Q ss_pred CCCEEEEEccC-hHHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCC----HHHHh--h
Q 019328 164 KGQTVGVIGAG-RIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS----MDEVL--R 235 (342)
Q Consensus 164 ~gktvGIiG~G-~IG~~vA~~l~~a~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~ell--~ 235 (342)
.|++|.|+|.| .||..+++.+ +.. |++|++.+++...... ...++. .........+ +.++. .
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a-~~~~Ga~Vi~~~~~~~~~~~--~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~ 239 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIA-KAVSGATIIGVDVREEAVEA--AKRAGA-------DYVINASMQDPLAEIRRITESK 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHHTCCEEEEEESSHHHHHH--HHHHTC-------SEEEETTTSCHHHHHHHHTTTS
T ss_pred CCCEEEEECCCccHHHHHHHHH-HHcCCCeEEEEcCCHHHHHH--HHHhCC-------CEEecCCCccHHHHHHHHhcCC
Confidence 47899999999 9999999986 677 9999999988654321 122221 0000001112 23333 2
Q ss_pred cCCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCCC
Q 019328 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (342)
Q Consensus 236 ~sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sRG 274 (342)
..|+|+.+..... + -...++.++++..++.++..
T Consensus 240 ~~d~vi~~~g~~~-~----~~~~~~~l~~~G~iv~~g~~ 273 (347)
T 1jvb_A 240 GVDAVIDLNNSEK-T----LSVYPKALAKQGKYVMVGLF 273 (347)
T ss_dssp CEEEEEESCCCHH-H----HTTGGGGEEEEEEEEECCSS
T ss_pred CceEEEECCCCHH-H----HHHHHHHHhcCCEEEEECCC
Confidence 5799988876321 1 13456778899999988753
No 482
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.66 E-value=0.11 Score=48.30 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=58.4
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHH----Hhh--c
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE----VLR--E 236 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e----ll~--~ 236 (342)
.|.+|.|+|.|.+|...++.+ +.+ |.+|++.+++.++.. +..+++ .... .....++.+ +.. .
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla-~~~g~~~Vi~~~~~~~~~~--~~~~lG-------a~~~-i~~~~~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQIL-RAVSAARVIAVDLDDDRLA--LAREVG-------ADAA-VKSGAGAADAIRELTGGQG 239 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHCCCEEEEEESCHHHHH--HHHHTT-------CSEE-EECSTTHHHHHHHHHGGGC
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCCHHHHH--HHHHcC-------CCEE-EcCCCcHHHHHHHHhCCCC
Confidence 488999999999999999985 676 789999998876432 222222 1111 111112222 222 5
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~s 272 (342)
.|+|+-++.... + -...++.++++..++.++
T Consensus 240 ~d~v~d~~G~~~-~----~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 240 ATAVFDFVGAQS-T----IDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEEESSCCHH-H----HHHHHHHEEEEEEEEECS
T ss_pred CeEEEECCCCHH-H----HHHHHHHHhcCCEEEEEC
Confidence 789988877321 1 234667778888888775
No 483
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.63 E-value=0.17 Score=47.43 Aligned_cols=94 Identities=16% Similarity=0.203 Sum_probs=59.2
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHH-H---hh--c
Q 019328 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE-V---LR--E 236 (342)
Q Consensus 164 ~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e-l---l~--~ 236 (342)
.|++|.|.|. |.||..+++.+ +..|++|++.++++.... ....++ ..........++.+ + .. .
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~~~~~g-------a~~~~d~~~~~~~~~~~~~~~~~~ 239 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIA-RAYGLKILGTAGTEEGQK--IVLQNG-------AHEVFNHREVNYIDKIKKYVGEKG 239 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHH-HHTTCEEEEEESSHHHHH--HHHHTT-------CSEEEETTSTTHHHHHHHHHCTTC
T ss_pred CcCEEEEECCCChHHHHHHHHH-HHCCCEEEEEeCChhHHH--HHHHcC-------CCEEEeCCCchHHHHHHHHcCCCC
Confidence 4889999998 99999999986 789999999998865432 111221 10000001112222 2 21 4
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+|+.+... .+ -...++.++++..++.++.
T Consensus 240 ~D~vi~~~G~--~~----~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 240 IDIIIEMLAN--VN----LSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp EEEEEESCHH--HH----HHHHHHHEEEEEEEEECCC
T ss_pred cEEEEECCCh--HH----HHHHHHhccCCCEEEEEec
Confidence 7888887652 11 2456778888888888874
No 484
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=92.60 E-value=0.18 Score=46.41 Aligned_cols=79 Identities=10% Similarity=0.116 Sum_probs=50.2
Q ss_pred cccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc--cccccCCHHHHhh--
Q 019328 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLR-- 235 (342)
Q Consensus 161 ~~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~-- 235 (342)
.++.|++|.|.|. |.||+.+++.| ...|.+|++.+|+.....+. ... + ...... ......+++++++
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L-~~~g~~V~~~~r~~~~~~~~-~~~----l--~~v~~~~~Dl~d~~~~~~~~~~~ 87 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHW-LPQGHEILVIDNFATGKREV-LPP----V--AGLSVIEGSVTDAGLLERAFDSF 87 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHH-GGGTCEEEEEECCSSSCGGG-SCS----C--TTEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEECCCccchhh-hhc----c--CCceEEEeeCCCHHHHHHHHhhc
Confidence 5789999999997 99999999998 46799999999864321100 000 0 000000 0011124567777
Q ss_pred cCCEEEEcCCCC
Q 019328 236 EADVISLHPVLD 247 (342)
Q Consensus 236 ~sDiV~l~lplt 247 (342)
..|+|+.+....
T Consensus 88 ~~D~vih~A~~~ 99 (330)
T 2pzm_A 88 KPTHVVHSAAAY 99 (330)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCccC
Confidence 899998886543
No 485
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=92.57 E-value=0.23 Score=44.89 Aligned_cols=77 Identities=19% Similarity=0.221 Sum_probs=47.2
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhh----HHHHHHhhhhhhhccCCCCCc--cccccCCHHHHhhcC
Q 019328 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT----RLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREA 237 (342)
Q Consensus 165 gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~s 237 (342)
.++|.|.|. |.||+.+++.| ..-|.+|++.+|+... ........ +...+..-. ......++.++++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L-~~~g~~V~~l~R~~~~~~~~~~~~~~~~----l~~~~v~~v~~D~~d~~~l~~~~~~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKAS-LDLGHPTFLLVRESTASSNSEKAQLLES----FKASGANIVHGSIDDHASLVEAVKNV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHH-HHTTCCEEEECCCCCTTTTHHHHHHHHH----HHTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred CCEEEEEcCCcHHHHHHHHHH-HhCCCCEEEEECCcccccCHHHHHHHHH----HHhCCCEEEEeccCCHHHHHHHHcCC
Confidence 478999996 99999999998 4678999999987421 11100000 001111000 011123567788899
Q ss_pred CEEEEcCCC
Q 019328 238 DVISLHPVL 246 (342)
Q Consensus 238 DiV~l~lpl 246 (342)
|+|+.+.+.
T Consensus 79 d~vi~~a~~ 87 (308)
T 1qyc_A 79 DVVISTVGS 87 (308)
T ss_dssp SEEEECCCG
T ss_pred CEEEECCcc
Confidence 999888763
No 486
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.54 E-value=0.37 Score=45.29 Aligned_cols=94 Identities=13% Similarity=0.169 Sum_probs=60.0
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHhc-CCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhh-----c
Q 019328 164 KGQTVGVIG-AGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----E 236 (342)
Q Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~a-~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~ 236 (342)
.|.+|.|+| .|.+|...++.+ +. .|++|++.+++.++.. +..+++ ... ......++.+.+. .
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qla-k~~~g~~Vi~~~~~~~~~~--~~~~lG-------ad~-vi~~~~~~~~~v~~~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIA-RQRTDLTVIATASRPETQE--WVKSLG-------AHH-VIDHSKPLAAEVAALGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHH-HHHCCSEEEEECSSHHHHH--HHHHTT-------CSE-EECTTSCHHHHHHTTCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHhcCCEEEEEeCCHHHHH--HHHHcC-------CCE-EEeCCCCHHHHHHHhcCCC
Confidence 688999999 999999999985 66 5899999999865432 112222 110 1111123433332 5
Q ss_pred CCEEEEcCCCCcccccccCHhHHccCCCCcEEEecCC
Q 019328 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (342)
Q Consensus 237 sDiV~l~lplt~~t~~li~~~~l~~mk~gailIN~sR 273 (342)
.|+|+-++...+ .-...++.++++..++.++.
T Consensus 240 ~Dvvid~~g~~~-----~~~~~~~~l~~~G~iv~~g~ 271 (363)
T 4dvj_A 240 PAFVFSTTHTDK-----HAAEIADLIAPQGRFCLIDD 271 (363)
T ss_dssp EEEEEECSCHHH-----HHHHHHHHSCTTCEEEECSC
T ss_pred ceEEEECCCchh-----hHHHHHHHhcCCCEEEEECC
Confidence 788888766211 12456778899988888753
No 487
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=92.52 E-value=0.29 Score=44.19 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=33.1
Q ss_pred cccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChh
Q 019328 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 161 ~~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~ 200 (342)
..+.||++-|.|- |.||+.+|+.|+ ..|++|+..+++..
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~ 64 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALA-ASGFDIAITGIGDA 64 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCCH
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHH-HCCCeEEEEeCCCH
Confidence 4688999999997 789999999984 78999999986443
No 488
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=92.49 E-value=0.15 Score=45.76 Aligned_cols=39 Identities=23% Similarity=0.095 Sum_probs=33.4
Q ss_pred cccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChh
Q 019328 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (342)
Q Consensus 161 ~~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~ 200 (342)
..+.||++-|.|- |.||+.+|+.|+ ..|++|+..+++..
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la-~~G~~V~~~~~~~~ 63 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELA-AAGAKVAVNYASSA 63 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCCh
Confidence 4789999999997 789999999984 78999998887543
No 489
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=92.45 E-value=0.18 Score=47.83 Aligned_cols=32 Identities=34% Similarity=0.513 Sum_probs=23.4
Q ss_pred CEEEEEccChHHHHHHHHHHhc-C--CcEEE-EEcC
Q 019328 166 QTVGVIGAGRIGSAYARMMVEG-F--KMNLI-YYDL 197 (342)
Q Consensus 166 ktvGIiG~G~IG~~vA~~l~~a-~--g~~V~-~~d~ 197 (342)
.+|||||+|.||+.+++.+.+. + +++|. ++|+
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 3799999999999999987432 2 35665 4454
No 490
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=92.44 E-value=0.38 Score=43.35 Aligned_cols=76 Identities=11% Similarity=0.106 Sum_probs=46.9
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCCh-h-----hHHHHHHhhhhhhhccCCCCCc--cccccCCHHHHhh
Q 019328 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ-A-----TRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLR 235 (342)
Q Consensus 165 gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~-~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~ 235 (342)
+++|.|.|. |.||+.+++.|+ .-|.+|.+.+|+. . ...... .. +...+..-. ......++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~~~~~~-~~----l~~~~v~~v~~D~~d~~~l~~~~~ 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASI-KAGNPTYALVRKTITAANPETKEELI-DN----YQSLGVILLEGDINDHETLVKAIK 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-HHTCCEEEEECCSCCSSCHHHHHHHH-HH----HHHTTCEEEECCTTCHHHHHHHHT
T ss_pred CcEEEEECCCchHHHHHHHHHH-hCCCcEEEEECCCcccCChHHHHHHH-HH----HHhCCCEEEEeCCCCHHHHHHHHh
Confidence 578999996 999999999984 5688999998875 1 111110 00 000111000 0111235677888
Q ss_pred cCCEEEEcCCC
Q 019328 236 EADVISLHPVL 246 (342)
Q Consensus 236 ~sDiV~l~lpl 246 (342)
.+|+|+.+.+.
T Consensus 76 ~~d~vi~~a~~ 86 (307)
T 2gas_A 76 QVDIVICAAGR 86 (307)
T ss_dssp TCSEEEECSSS
T ss_pred CCCEEEECCcc
Confidence 99999888764
No 491
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.40 E-value=0.11 Score=46.40 Aligned_cols=40 Identities=35% Similarity=0.383 Sum_probs=34.9
Q ss_pred cccCCCEEEEEcc-C-hHHHHHHHHHHhcCCcEEEEEcCChhh
Q 019328 161 NLLKGQTVGVIGA-G-RIGSAYARMMVEGFKMNLIYYDLYQAT 201 (342)
Q Consensus 161 ~~l~gktvGIiG~-G-~IG~~vA~~l~~a~g~~V~~~d~~~~~ 201 (342)
..+.||++-|.|- | .||+.+|+.|+ ..|++|+..+|+...
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l~-~~G~~V~~~~r~~~~ 59 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRAL-LEGADVVISDYHERR 59 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHHH-HTTCEEEEEESCHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHH-HCCCEEEEecCCHHH
Confidence 3689999999998 8 59999999984 779999999998754
No 492
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=92.31 E-value=0.08 Score=47.63 Aligned_cols=71 Identities=11% Similarity=0.077 Sum_probs=46.1
Q ss_pred EEEEEc-cChHHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc--cccccCCHHHHhhcCCEEEE
Q 019328 167 TVGVIG-AGRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVISL 242 (342)
Q Consensus 167 tvGIiG-~G~IG~~vA~~l~~a~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~sDiV~l 242 (342)
+|.|.| .|.||+.+++.|+ .- |.+|.+.+|++.+... +...+..-. ......+++++++.+|+|+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~~~g~~V~~~~R~~~~~~~---------~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~ 71 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAI-ANHIDHFHIGVRNVEKVPD---------DWRGKVSVRQLDYFNQESMVEAFKGMDTVVF 71 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHH-HTTCTTEEEEESSGGGSCG---------GGBTTBEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred EEEEEcCCchHHHHHHHHHh-hCCCCcEEEEECCHHHHHH---------hhhCCCEEEEcCCCCHHHHHHHHhCCCEEEE
Confidence 688999 5999999999974 55 8999999988654210 000010000 01112356778999999998
Q ss_pred cCCCC
Q 019328 243 HPVLD 247 (342)
Q Consensus 243 ~lplt 247 (342)
+....
T Consensus 72 ~a~~~ 76 (289)
T 3e48_A 72 IPSII 76 (289)
T ss_dssp CCCCC
T ss_pred eCCCC
Confidence 87643
No 493
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.28 E-value=0.14 Score=50.17 Aligned_cols=75 Identities=15% Similarity=0.206 Sum_probs=47.3
Q ss_pred CCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHH-hhcCCEEEEc
Q 019328 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV-LREADVISLH 243 (342)
Q Consensus 165 gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el-l~~sDiV~l~ 243 (342)
..+|-|+|+|.+|+.+|+.| ...|.+|.+.|.+++.. +...+.++... ..+. ......|+++ +++||.++.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L-~~~~~~v~vId~d~~~~-~~~~~~~~~~~----i~Gd-~~~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENL-VGENNDITIVDKDGDRL-RELQDKYDLRV----VNGH-ASHPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHT-CSTTEEEEEEESCHHHH-HHHHHHSSCEE----EESC-TTCHHHHHHHTTTTCSEEEEC
T ss_pred cCEEEEECCCHHHHHHHHHH-HHCCCCEEEEECCHHHH-HHHHHhcCcEE----EEEc-CCCHHHHHhcCCCcCCEEEEE
Confidence 45799999999999999997 68899999999987542 22212221000 0000 0011123333 6889999887
Q ss_pred CCC
Q 019328 244 PVL 246 (342)
Q Consensus 244 lpl 246 (342)
.+.
T Consensus 76 t~~ 78 (461)
T 4g65_A 76 TNT 78 (461)
T ss_dssp CSC
T ss_pred cCC
Confidence 773
No 494
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=92.27 E-value=0.14 Score=45.00 Aligned_cols=36 Identities=28% Similarity=0.238 Sum_probs=32.0
Q ss_pred ccCCCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCC
Q 019328 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLY 198 (342)
Q Consensus 162 ~l~gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~ 198 (342)
++.||++-|.|- |.||+.+++.|+ .-|++|++.+|+
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~-~~G~~V~~~~r~ 40 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFA-RAGAKVGLHGRK 40 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEECCC
Confidence 578999999986 999999999984 679999999987
No 495
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=92.21 E-value=0.25 Score=49.19 Aligned_cols=117 Identities=12% Similarity=0.098 Sum_probs=68.3
Q ss_pred cCCCEEEEEccChHHHH-HHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHhhcCCEEE
Q 019328 163 LKGQTVGVIGAGRIGSA-YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (342)
Q Consensus 163 l~gktvGIiG~G~IG~~-vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~sDiV~ 241 (342)
..+++|-|||.|.+|.+ +|+.| +..|++|.++|....+...+. ++..+. ....-.+.+.+...+|+|+
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l-~~~G~~V~~sD~~~~~~~~~~-------L~~~gi---~~~~G~~~~~~~~~~d~vV 85 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLA-RALGHTVTGSDANIYPPMSTQ-------LEQAGV---TIEEGYLIAHLQPAPDLVV 85 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESCCCTTHHHH-------HHHTTC---EEEESCCGGGGCSCCSEEE
T ss_pred ecCCEEEEEEecHhhHHHHHHHH-HhCCCEEEEECCCCCcHHHHH-------HHHCCC---EEECCCCHHHcCCCCCEEE
Confidence 45789999999999997 68876 789999999998643211111 111111 1111123445556799998
Q ss_pred Ec--CCC-Ccccc-------cccCH-hHHcc--CCC-CcEEEecCCCccCCHHHHHHHHHcCC
Q 019328 242 LH--PVL-DKTTY-------HLINK-ERLAT--MKK-EAILVNCSRGPVIDEVALVEHLKQNP 290 (342)
Q Consensus 242 l~--lpl-t~~t~-------~li~~-~~l~~--mk~-gailIN~sRG~~vd~~aL~~aL~~g~ 290 (342)
.. +|. +|+.. .++.+ +.+.. +++ ..+-|-=+.|..--..-+...|+...
T Consensus 86 ~Spgi~~~~p~l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G 148 (524)
T 3hn7_A 86 VGNAMKRGMDVIEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAG 148 (524)
T ss_dssp ECTTCCTTSHHHHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred ECCCcCCCCHHHHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 86 442 22221 23433 33343 333 34555556788777777777787643
No 496
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.18 E-value=0.24 Score=45.92 Aligned_cols=38 Identities=24% Similarity=0.326 Sum_probs=32.7
Q ss_pred CCCEEEEEccChHHHHHHHHHHhcCCcEEEEEcCChhh
Q 019328 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (342)
Q Consensus 164 ~gktvGIiG~G~IG~~vA~~l~~a~g~~V~~~d~~~~~ 201 (342)
.|.+|.|+|.|.+|...++.+++..|.+|++.++++++
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r 200 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDK 200 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHH
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHH
Confidence 47899999999999999998644678999999998764
No 497
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=92.15 E-value=0.28 Score=47.41 Aligned_cols=106 Identities=18% Similarity=0.250 Sum_probs=66.6
Q ss_pred cCCCEEEEEc-----cCh---HHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCccccccCCHHHHh
Q 019328 163 LKGQTVGVIG-----AGR---IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL 234 (342)
Q Consensus 163 l~gktvGIiG-----~G~---IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell 234 (342)
+.|++|+|+| +|. +.++.+..+ ..||++|.+..|..-...+...+......+..+ .......++++.+
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l-~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G---~~v~~~~d~~eav 261 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLM-TRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFG---GNFTKTNSMAEAF 261 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHH-GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHS---SEEEEESCHHHHH
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHH-HHcCCEEEEECCccccCCHHHHHHHHHHHHHcC---CEEEEEcCHHHHh
Confidence 8899999998 464 999999987 689999999988621100111110000000011 1123457899999
Q ss_pred hcCCEEEEcCCCC----------------c-------------c--cccccCHhHHccCCC-CcEEEecC
Q 019328 235 READVISLHPVLD----------------K-------------T--TYHLINKERLATMKK-EAILVNCS 272 (342)
Q Consensus 235 ~~sDiV~l~lplt----------------~-------------~--t~~li~~~~l~~mk~-gailIN~s 272 (342)
+++|+|..-+-.. + + ..--++.+.++.+|+ +++|.-+.
T Consensus 262 ~~ADVVytd~W~sm~~Q~ER~~~~~~g~~~~~~~~~~~~~~~~~~~~~y~vt~elm~~ak~~dai~MHcL 331 (418)
T 2yfk_A 262 KDADVVYPKSWAPFAAMEKRTELYGNGDQAGIDQLEQELLSQNKKHKDWECTEELMKTTKDGKALYMHCL 331 (418)
T ss_dssp TTCSEEEECCCCCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHGGGTTCCBCHHHHHTSGGGCCEECCCS
T ss_pred cCCCEEEEccccchhHHHHHhhhhccccchhhhhhhhhhhhHHHHHhhcCCCHHHHHhcCCCCeEEECCC
Confidence 9999999864211 0 0 112468889999986 78887664
No 498
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=92.13 E-value=0.38 Score=44.80 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=59.3
Q ss_pred CEEEEEcc-ChHHHHHHHHHHhcCCc-------EEEEEcCC----hhhHHHHHHhhhhhhhccCC-CCCccccccCCHHH
Q 019328 166 QTVGVIGA-GRIGSAYARMMVEGFKM-------NLIYYDLY----QATRLEKFVTAYGQFLKANG-EQPVTWKRASSMDE 232 (342)
Q Consensus 166 ktvGIiG~-G~IG~~vA~~l~~a~g~-------~V~~~d~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~e 232 (342)
.+|.|+|. |.+|..++..|+ .-|+ +|..+|+. .+. .+...... .+.. ..........++.+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~-~~~~~~~~~~~ev~l~Di~~~~~~~~-~~g~~~dl----~~~~~~~~~~i~~~~~~~~ 79 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIA-NGDMLGKDQPVILQLLEIPNEKAQKA-LQGVMMEI----DDCAFPLLAGMTAHADPMT 79 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHH-TTTTTCTTCCEEEEEECCSCHHHHHH-HHHHHHHH----HTTTCTTEEEEEEESSHHH
T ss_pred CEEEEECCCChHHHHHHHHHH-hCCCcCCCCCCEEEEEcCCCcccccc-chhhHHHH----hhhcccccCcEEEecCcHH
Confidence 58999997 999999999874 4554 89999987 321 11111111 1100 00111222367889
Q ss_pred HhhcCCEEEEcCCCCcc---ccc-c--cC----H---hHHccC-CCCcEEEecCC
Q 019328 233 VLREADVISLHPVLDKT---TYH-L--IN----K---ERLATM-KKEAILVNCSR 273 (342)
Q Consensus 233 ll~~sDiV~l~lplt~~---t~~-l--i~----~---~~l~~m-k~gailIN~sR 273 (342)
.++.||+|+.+...... ++. + .| . +.+... +|.++||++|-
T Consensus 80 al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 80 AFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 99999999988543221 111 1 11 1 223333 48899999983
No 499
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=92.11 E-value=0.11 Score=48.84 Aligned_cols=31 Identities=19% Similarity=0.337 Sum_probs=23.9
Q ss_pred CEEEEEc-cChHHHHHHHHHHhc--CCcEEEEEc
Q 019328 166 QTVGVIG-AGRIGSAYARMMVEG--FKMNLIYYD 196 (342)
Q Consensus 166 ktvGIiG-~G~IG~~vA~~l~~a--~g~~V~~~d 196 (342)
.+|||+| +|.||+.+.+.|... -..++.++.
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~ 37 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLA 37 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence 5899999 999999999987432 246666654
No 500
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=92.00 E-value=0.51 Score=42.88 Aligned_cols=75 Identities=12% Similarity=0.206 Sum_probs=46.5
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhccCCCCCc--cccccCCHHHHhhcCCEEE
Q 019328 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVIS 241 (342)
Q Consensus 165 gktvGIiG~-G~IG~~vA~~l~~a~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~sDiV~ 241 (342)
.++|.|.|. |.||+.+++.|. .-|.+|.+.+|+........ .. +...+..-. ......++.++++.+|+|+
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~~~~-~~----l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi 84 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSL-KLGHPTYVFTRPNSSKTTLL-DE----FQSLGAIIVKGELDEHEKLVELMKKVDVVI 84 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHH-HTTCCEEEEECTTCSCHHHH-HH----HHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CCeEEEECCCchHHHHHHHHHH-HCCCcEEEEECCCCchhhHH-HH----hhcCCCEEEEecCCCHHHHHHHHcCCCEEE
Confidence 468999995 999999999984 66899999988764111100 00 000111000 0111235677888999998
Q ss_pred EcCC
Q 019328 242 LHPV 245 (342)
Q Consensus 242 l~lp 245 (342)
.+.+
T Consensus 85 ~~a~ 88 (318)
T 2r6j_A 85 SALA 88 (318)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 8876
Done!