BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019332
(342 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 563 bits (1450), Expect = e-161, Method: Compositional matrix adjust.
Identities = 267/343 (77%), Positives = 309/343 (90%), Gaps = 1/343 (0%)
Query: 1 MPEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRM 60
M E V NKQVILK+YV+G+PKE+DM + +I+L+VP+GSN V++KNLYLSCDPYMR RM
Sbjct: 1 MAEEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSNDVVVKNLYLSCDPYMRSRM 60
Query: 61 TNIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ-LFKI 119
I+GSYVESF PG PI+GYGVAKVL+S +P+F+KGDLVWGMTGWEEYS++T Q LFKI
Sbjct: 61 RKIEGSYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKI 120
Query: 120 QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
DVPLSYYTGILGMPGMTAYAGF+EVCSPK+GE VF+SAASGAVGQLVGQFAK+LGCY
Sbjct: 121 HDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCY 180
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
VVGSAGSK+K+DLLK+KFGFDEAFNYKEE DL+ ALKRYFP+GIDIYFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVL 240
Query: 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIP 299
+NMK++GRIAVCGMISQYNL++ EGVHNL L+TKR+RMEGFLV DYYHLYPK+LEM+IP
Sbjct: 241 VNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIP 300
Query: 300 HIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
IK GK+VYVED+A GLESAP L+GLFSGRN+GKQVV V+ E
Sbjct: 301 QIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 504 bits (1298), Expect = e-143, Method: Compositional matrix adjust.
Identities = 236/341 (69%), Positives = 285/341 (83%), Gaps = 5/341 (1%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTN---I 63
NKQVILKDYVSGFP E+D T +++EL+VP+G+N VL+KNLYLSCDPYMR RM
Sbjct: 5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPS 64
Query: 64 KGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVT--APQLFKIQH 121
+ +++ PG PI GYGV+++++S +P++KKGDL+WG+ WEEYS++T FKIQH
Sbjct: 65 TAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQH 124
Query: 122 TDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVV 181
TDVPLSYYTG+LGMPGMTAYAGFYEVCSPK+GE V++SAASGAVGQLVGQ AK++GCYVV
Sbjct: 125 TDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVV 184
Query: 182 GSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLN 241
GSAGSK+K+DLLK KFGFD+AFNYKEE DL ALKR FP GIDIYFENVGGKMLDAVL+N
Sbjct: 185 GSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVN 244
Query: 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHI 301
M +HGRIAVCGMISQYNL+ EGVHNL ++ KR R++GF+V D+Y Y KFLE ++PHI
Sbjct: 245 MNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHI 304
Query: 302 KEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
+EGKI YVED+A+GLE AP L+GLF G+NVGKQVV VA E
Sbjct: 305 REGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/335 (42%), Positives = 193/335 (57%), Gaps = 8/335 (2%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNG-VLLKNLYLSCDPYMRPRMTNIKG 65
N+Q L SG P T S +E + + + G +L+KN YLS DP MR M + +
Sbjct: 8 NRQYQLAQRPSGLPGRD----TFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDAR- 62
Query: 66 SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTDVP 125
SY+ G + GV KVL S++P F+ GD V G G ++Y + +K+ + P
Sbjct: 63 SYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALGVQDYFIGEPKGFYKVDPSRAP 122
Query: 126 LSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG 185
L Y LGM GMTAY +V PK GE V IS A+GAVG + GQ A+L GC VVG AG
Sbjct: 123 LPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG 182
Query: 186 SKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIH 245
+K L + GFD A +YK E DL LKR P+GID++F+NVGG++LD VL +
Sbjct: 183 GAEKCRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFK 241
Query: 246 GRIAVCGMISQY-NLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEG 304
RI +CG ISQY N + G N + L+ R RMEG +V DY +P+ L+ + + EG
Sbjct: 242 ARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEG 301
Query: 305 KIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
K+ ED+ EGLE+ P TL+ LFSG N GK V+ V
Sbjct: 302 KLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 234 bits (597), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 203/345 (58%), Gaps = 20/345 (5%)
Query: 2 PE-MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNG-VLLKNLYLSCDPYMRPR 59
PE MV+ K LK + G P ++D + ++EL P NG VLL+ L+LS DPYMR
Sbjct: 2 PEFMVKAKSWTLKKHFQGKPTQSDFEL--KTVEL--PPLKNGEVLLEALFLSVDPYMRIA 57
Query: 60 MTNIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKI 119
+K G + G VA+V++S+N F G +V +GW + + L K+
Sbjct: 58 SKRLK--------EGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKL 109
Query: 120 QH---TDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLL 176
+PLS G +GMPG+TAY G EVC K GE V +SAA+GAVG +VGQ AKL
Sbjct: 110 LTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLK 169
Query: 177 GCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLD 236
GC VVG+AGS +KI LK + GFD AFNYK L EALK+ P+G D YF+NVGG+ L+
Sbjct: 170 GCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLN 228
Query: 237 AVLLNMKIHGRIAVCGMISQYN-LDRPEGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKFL 294
VL MK G+IA+CG IS YN +D+ + ++ K++R+EGF+V + + K L
Sbjct: 229 TVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKAL 288
Query: 295 EMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
++ + EGKI Y E + +G E+ PA I + +G N+GK VV
Sbjct: 289 RDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVTA 333
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 221 bits (563), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 188/337 (55%), Gaps = 19/337 (5%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNG-VLLKNLYLSCDPYMRPRMTNIKG 65
K LK + G+P +D + S ++P NG VLL+ L+L+ DPYMR
Sbjct: 3 TKTWTLKKHFVGYPTNSDFELKTS----ELPPLKNGEVLLEALFLTVDPYMRVA------ 52
Query: 66 SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQH---T 122
+ K G + G VAKV++S+N KG +V GW +S+ L K+
Sbjct: 53 --AKRLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPD 110
Query: 123 DVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVG 182
+PLS G +GMPG+TAY G E+C K GE V ++AA+GAVG +VGQ AKL GC VVG
Sbjct: 111 TIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVG 170
Query: 183 SAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNM 242
+ GS +K+ L+ K GFD FNYK L E LK+ P+G D YF+NVGG+ + V+ M
Sbjct: 171 AVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQM 229
Query: 243 KIHGRIAVCGMISQYNLDRPEGVHNLMYLVT-KRVRMEGFLVRDYY-HLYPKFLEMIIPH 300
K GRIA+CG IS YN P +V + +RME F+V + K L+ ++
Sbjct: 230 KKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKW 289
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
+ EGKI Y E + EG E+ PA +G+ G N+GK +V
Sbjct: 290 VLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 326
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 221 bits (563), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 188/337 (55%), Gaps = 19/337 (5%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNG-VLLKNLYLSCDPYMRPRMTNIKG 65
K LK + G+P +D + S ++P NG VLL+ L+L+ DPYMR
Sbjct: 24 TKTWTLKKHFVGYPTNSDFELKTS----ELPPLKNGEVLLEALFLTVDPYMRVA------ 73
Query: 66 SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQH---T 122
+ K G + G VAKV++S+N KG +V GW +S+ L K+
Sbjct: 74 --AKRLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPD 131
Query: 123 DVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVG 182
+PLS G +GMPG+TAY G E+C K GE V ++AA+GAVG +VGQ AKL GC VVG
Sbjct: 132 TIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVG 191
Query: 183 SAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNM 242
+ GS +K+ L+ K GFD FNYK L E LK+ P+G D YF+NVGG+ + V+ M
Sbjct: 192 AVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQM 250
Query: 243 KIHGRIAVCGMISQYNLDRPEGVHNLMYLVT-KRVRMEGFLVRDYY-HLYPKFLEMIIPH 300
K GRIA+CG IS YN P +V + +RME F+V + K L+ ++
Sbjct: 251 KKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKW 310
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
+ EGKI Y E + EG E+ PA +G+ G N+GK +V
Sbjct: 311 VLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 347
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 175/342 (51%), Gaps = 24/342 (7%)
Query: 17 SGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGM 75
+G P + M E + + +G V ++ LYLS DPYMR RM G+ Y+ ++
Sbjct: 21 NGNPVAENFRMEEVYLPDNINEGQ--VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQ 78
Query: 76 PISGYGVAKVLDSENPEFKKGDLVWGMTG-WEEYSLVTAPQLFKI--QHTDVPLSYYTGI 132
+ G G+ + +S++ KGD V W+ ++ L K+ Q D LSY+ G
Sbjct: 79 VVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGA 138
Query: 133 LGMPGMTAYAGFYEVCSPKQG--ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDK 189
+GMPG+T+ G E G + + +S A+GA G + GQ LGC VVG G+ +K
Sbjct: 139 IGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEK 198
Query: 190 IDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIA 249
LL ++ GFD A NYK++ ++ E L+ P G+D+YF+NVGG + D V+ M + I
Sbjct: 199 CILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHII 257
Query: 250 VCGMISQYNLDRP---------EGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
+CG ISQYN D P E + + + E FLV +Y + + +
Sbjct: 258 LCGQISQYNKDVPYPPPLSPAIEAIQK-----ERNITRERFLVLNYKDKFEPGILQLSQW 312
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
KEGK+ E + GLE+ A + +G N+GKQ+V ++ E
Sbjct: 313 FKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 175/342 (51%), Gaps = 24/342 (7%)
Query: 17 SGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGM 75
+G P + M E + + +G V ++ LYLS DPYMR RM G+ Y+ ++
Sbjct: 16 NGNPVAENFRMEEVYLPDNINEGQ--VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQ 73
Query: 76 PISGYGVAKVLDSENPEFKKGDLVWGMTG-WEEYSLVTAPQLFKI--QHTDVPLSYYTGI 132
+ G G+ + +S++ KGD V W+ ++ L K+ Q D LSY+ G
Sbjct: 74 VVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGA 133
Query: 133 LGMPGMTAYAGFYEVCSPKQG--ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDK 189
+GMPG+T+ G E G + + +S A+GA G + GQ LGC VVG G+ +K
Sbjct: 134 IGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEK 193
Query: 190 IDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIA 249
LL ++ GFD A NYK++ ++ E L+ P G+D+YF+NVGG + D V+ M + I
Sbjct: 194 CILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHII 252
Query: 250 VCGMISQYNLDRP---------EGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
+CG ISQYN D P E + + + E FLV +Y + + +
Sbjct: 253 LCGQISQYNKDVPYPPPLSPAIEAIQK-----ERNITRERFLVLNYKDKFEPGILQLSQW 307
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
KEGK+ E + GLE+ A + +G N+GKQ+V ++ E
Sbjct: 308 FKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 349
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 169/323 (52%), Gaps = 14/323 (4%)
Query: 33 ELQVPKGSN--GVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYGVAKVLDSE 89
E +P N V ++ LYLS DPYMR +M G+ Y+ ++ G G+ V +S+
Sbjct: 29 EFSLPDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESK 88
Query: 90 NPEFKKGDLVWGMTG-WEEYSLVTAPQLFKI--QHTDVPLSYYTGILGMPGMTAYAGFYE 146
+ + KGD V W+ +++ L K+ Q D LSY+ G +GMPG+T+ G E
Sbjct: 89 HQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQE 148
Query: 147 V--CSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAF 203
S + + +S A+GA G L GQ LLGC VVG G+++K L ++ GFD A
Sbjct: 149 KGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAV 208
Query: 204 NYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPE 263
NYK ++ E L+ P G+D+YF+NVGG + +AV+ M + I +CG ISQY+ D P
Sbjct: 209 NYKT-GNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPY 267
Query: 264 GVHNLMYLVTKR----VRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESA 319
+ R + E F V +Y + + + KEGK+ E MA+GLE+
Sbjct: 268 PPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETMAKGLENM 327
Query: 320 PATLIGLFSGRNVGKQVVAVAPE 342
+ +G NVGKQ+V ++ +
Sbjct: 328 GVAFQSMMTGGNVGKQIVCISED 350
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 158/311 (50%), Gaps = 12/311 (3%)
Query: 43 VLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWG 101
V ++ LYLS DPY R + G+ Y+ ++ G G+ V +S++ + KGD V
Sbjct: 51 VQVRTLYLSVDPYXRCKXNEDTGTDYLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTS 110
Query: 102 MTG-WEEYSLVTAPQLFKI--QHTDVPLSYYTGILGMPGMTAYAGFYEV--CSPKQGECV 156
W+ +++ L K+ Q D LSY+ G +G PG+T+ G E S +
Sbjct: 111 FYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGXPGLTSLIGVQEKGHISAGSNQTX 170
Query: 157 FISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215
+S A+GA G L GQ LLGC VVG G+++K L ++ GFD A NYK ++ E L
Sbjct: 171 VVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQL 229
Query: 216 KRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKR 275
+ P G+D+YF+NVGG + + V+ + I +CG ISQYN D P + R
Sbjct: 230 REACPGGVDVYFDNVGGDISNTVISQXNENSHIILCGQISQYNKDVPYPPPLPPAVEAIR 289
Query: 276 ----VRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRN 331
+ E F V +Y + + + KEGK+ E +A+GLE+ +G N
Sbjct: 290 KERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETVAKGLENXGVAFQSXXTGGN 349
Query: 332 VGKQVVAVAPE 342
VGKQ+V ++ +
Sbjct: 350 VGKQIVCISED 360
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 135/292 (46%), Gaps = 27/292 (9%)
Query: 65 GSYVESFKPGMPISGYGVAKVLD---SENPEFKKGDLVWGMT--GWEEYSLVTAPQLFKI 119
G Y S KP I G+ +V+ S + + G V M + EY++V P
Sbjct: 54 GRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVV--PASIAT 111
Query: 120 QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
V Y T L + G TAY E+ +G+ V ++AA+G GQ Q +K C+
Sbjct: 112 PVPSVKPEYLT--LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCH 169
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
V+G+ S +K LK+ G D NYK EP + LK+ +PEG+D+ +E+VGG M D +
Sbjct: 170 VIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAV 227
Query: 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNL------MYLVTKRVRMEGFLVRDYYHLYPKF 293
+ GR+ V G IS Y P G+ + L+ K ++GF + Y Y
Sbjct: 228 DALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAA 285
Query: 294 LEMIIPHIKEGKIVYVEDMAE--------GLESAPATLIGLFSGRNVGKQVV 337
+ ++ G +V D+ + GLES + ++ G+N GK VV
Sbjct: 286 MSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 337
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 135/292 (46%), Gaps = 27/292 (9%)
Query: 65 GSYVESFKPGMPISGYGVAKVLD---SENPEFKKGDLVWGMT--GWEEYSLVTAPQLFKI 119
G Y S KP I G+ +V+ S + + G V M + EY++V P
Sbjct: 83 GRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVV--PASIAT 140
Query: 120 QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
V Y T L + G TAY E+ +G+ V ++AA+G GQ Q +K C+
Sbjct: 141 PVPSVKPEYLT--LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCH 198
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
V+G+ S +K LK+ G D NYK EP + LK+ +PEG+D+ +E+VGG M D +
Sbjct: 199 VIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAV 256
Query: 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNL------MYLVTKRVRMEGFLVRDYYHLYPKF 293
+ GR+ V G IS Y P G+ + L+ K ++GF + Y Y
Sbjct: 257 DALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAA 314
Query: 294 LEMIIPHIKEGKIVYVEDMAE--------GLESAPATLIGLFSGRNVGKQVV 337
+ ++ G +V D+ + GLES + ++ G+N GK VV
Sbjct: 315 MSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 366
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 135/292 (46%), Gaps = 27/292 (9%)
Query: 65 GSYVESFKPGMPISGYGVAKVLD---SENPEFKKGDLVWGMT--GWEEYSLVTAPQLFKI 119
G Y S KP I G+ +V+ S + + G V M + EY++V P
Sbjct: 75 GRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVV--PASIAT 132
Query: 120 QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
V Y T L + G TAY E+ +G+ V ++AA+G GQ Q +K C+
Sbjct: 133 PVPSVKPEYLT--LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCH 190
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
V+G+ S +K LK+ G D NYK EP + LK+ +PEG+D+ +E+VGG M D +
Sbjct: 191 VIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAV 248
Query: 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNL------MYLVTKRVRMEGFLVRDYYHLYPKF 293
+ GR+ V G IS Y P G+ + L+ K ++GF + Y Y
Sbjct: 249 DALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAA 306
Query: 294 LEMIIPHIKEGKIVYVEDMAE--------GLESAPATLIGLFSGRNVGKQVV 337
+ ++ G +V D+ + GLES + ++ G+N GK VV
Sbjct: 307 MSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 29 ESSIELQVPKGSNGVLLKNLYLSCDP---YMRPRMTNIKGSYVESFKPGMPIS-GYGVAK 84
S I + +PK + VL+K +P Y+R G+Y S KP +P + G VA
Sbjct: 47 RSDIAVPIPK-DHQVLIKVHACGVNPVETYIR------SGTY--SRKPLLPYTPGSDVAG 97
Query: 85 VLDS---ENPEFKKGDLVWGMT----GWEEYSLVTAPQLFKIQHTDVPLSYYTGI-LGMP 136
V+++ FKKGD V+ + G+ EY+L ++K+ L + G +G+P
Sbjct: 98 VIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPE---KLDFKQGAAIGIP 154
Query: 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KIDLLK 194
TAY K GE V + ASG VG Q A+ G ++G+AG+++ KI +L+
Sbjct: 155 YFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-VLQ 213
Query: 195 NKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
N G E FN++E +++ +K+Y E GIDI E + L L + GR+ V G
Sbjct: 214 N--GAHEVFNHREVNYIDK-IKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 23/235 (9%)
Query: 107 EYSLVTAPQLFKIQHTD-VPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAV 165
E +L P+ + +PL++ +TA+ + + G+ V + AA V
Sbjct: 129 EANLAPKPKNLSFEEAAAIPLTF---------LTAWQMVVDKLGVRPGDDVLVMAAGSGV 179
Query: 166 GQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF-PEGID 224
Q AKL G V+ +AGS+DK+ K G DE NY PD + ++R +G D
Sbjct: 180 SVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNYT-HPDWPKEVRRLTGGKGAD 237
Query: 225 IYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR 284
++ G + V+ GRIA+ G S Y EG ++ +++ + G +
Sbjct: 238 KVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMA 292
Query: 285 DYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
L+P I+ ++EGK+ V LE+A L R GK V+ V
Sbjct: 293 SKSRLFP-----ILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV 342
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 106/220 (48%), Gaps = 23/220 (10%)
Query: 56 MRPRMTNIKGSYVESF-KPGMP----------ISGYGVAKVLDSENP---EFKKGDLVWG 101
+R R T I ++++++ + G+P + G+ A V++ P +F G+ V
Sbjct: 31 VRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCT 90
Query: 102 ----MTGWEEYSLVTAPQLFKI-QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECV 156
+ + + L A +L K+ + D+ + G++ + GMTA ++ K G+ V
Sbjct: 91 CLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLM-LKGMTAQYLLHQTHKVKPGDYV 149
Query: 157 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALK 216
I AA+G +G ++ +A+ LG V+G+ +++K + + K G NY + D E ++
Sbjct: 150 LIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQ-DFAEVVR 207
Query: 217 RYF-PEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMIS 255
+G+D+ ++++G L L ++ G A G S
Sbjct: 208 EITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 117/301 (38%), Gaps = 34/301 (11%)
Query: 57 RPRMTNIKGSYVESFKPGMPISGYGVAKVLDSENPE---FKKGDLVWGMT---GWEEYSL 110
RP + +GSY K PI G ++ + P + GD V G+ + EY L
Sbjct: 69 RPDIAQRQGSYPPP-KDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCL 127
Query: 111 VTAPQLF-------KIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASG 163
+ A Q+ ++ +P +++T +A ++ +GE V I +
Sbjct: 128 LPAGQILPFPKGYDAVKAAALPETFFT---------VWANLFQXAGLTEGESVLIHGGTS 178
Query: 164 AVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGI 223
+G Q A+ G V +AGS K + + + G NY+ E D +K +G+
Sbjct: 179 GIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVIKAETGQGV 236
Query: 224 DIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLV 283
DI + +G + + ++ G +++ + ++ NL + KR+ + G
Sbjct: 237 DIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAVAEK----VNLSPIXVKRLTVTGSTX 292
Query: 284 R-----DYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVA 338
R + + L + P ++ G + V E L G +VGK +
Sbjct: 293 RPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVXLT 352
Query: 339 V 339
V
Sbjct: 353 V 353
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF 197
+TA+ + V + + G+ V I A VG Q ++ G + +AGS+ K+ + + K
Sbjct: 132 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 190
Query: 198 GFDEAFNYKEEPDLNEA-LKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQ 256
G FNYK+E D +EA LK G+++ + +GG + + + + GR + G++
Sbjct: 191 GAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGG 249
Query: 257 YNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPK-----FLEMIIPH 300
+++ P L+ KR + L+R + Y + F E I+PH
Sbjct: 250 GDINGPL----FSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 294
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF 197
+TA+ + V + + G+ V I A VG Q ++ G + +AGS+ K+ + + K
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 206
Query: 198 GFDEAFNYKEEPDLNEA-LKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQ 256
G FNYK+E D +EA LK G+++ + +GG + + + + GR + G++
Sbjct: 207 GAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGG 265
Query: 257 YNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPK-----FLEMIIPH 300
+++ P L+ KR + L+R + Y + F E I+PH
Sbjct: 266 GDINGPL----FSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 310
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 128 YYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187
Y G+L + +TA + E K+G+ V + AA+G VG ++ Q K+ G + + A +
Sbjct: 126 YAAGLLQV--LTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD 183
Query: 188 DKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGR 247
+K+ + K ++G + N +E L + LK +G+D F++VG + L +K G
Sbjct: 184 EKLKIAK-EYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGV 242
Query: 248 IA----VCGMISQYNLDR 261
G+I +++ R
Sbjct: 243 FVSFGNASGLIPPFSITR 260
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 26/281 (9%)
Query: 31 SIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISG--YGVAKVLD- 87
++EL +GS+ V +K L +P + I+G+Y P +P G GVA+V+
Sbjct: 46 NLELAAVRGSD-VRVKMLAAPINPS---DINMIQGNY--GLLPELPAVGGNEGVAQVVAV 99
Query: 88 -SENPEFKKGDLV----WGMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYA 142
S K GD V G+ W ++ + L ++ +D+PL LG+ TAY
Sbjct: 100 GSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQV-PSDIPLQS-AATLGVNPCTAYR 157
Query: 143 GFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA 202
+ + G+ V +A++ VGQ V Q A LG + + I L ++ A
Sbjct: 158 MLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGA 217
Query: 203 FNYKEEPDLNEA-LKRYFPE--GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNL 259
+ E +L +K +F + + VGGK +L + G + G +++ +
Sbjct: 218 EHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPV 277
Query: 260 DRPEGVHNLMYLVTKRVRMEGFLVRDYY--HLYPKFLEMII 298
V ++ L+ K +++ GF + + H +F E+I+
Sbjct: 278 -----VASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELIL 313
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 26/281 (9%)
Query: 31 SIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISG--YGVAKVLD- 87
++EL +GS+ V +K L +P + I+G+Y P +P G GVA+V+
Sbjct: 33 NLELAAVRGSD-VRVKMLAAPINPS---DINMIQGNY--GLLPELPAVGGNEGVAQVVAV 86
Query: 88 -SENPEFKKGDLV----WGMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYA 142
S K GD V G+ W ++ + L ++ +D+PL LG+ TAY
Sbjct: 87 GSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQV-PSDIPLQS-AATLGVNPCTAYR 144
Query: 143 GFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA 202
+ + G+ V +A++ VGQ V Q A LG + + I L ++ A
Sbjct: 145 MLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGA 204
Query: 203 FNYKEEPDLNEA-LKRYFPE--GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNL 259
+ E +L +K +F + + VGGK +L + G + G +++ +
Sbjct: 205 EHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPV 264
Query: 260 DRPEGVHNLMYLVTKRVRMEGFLVRDYY--HLYPKFLEMII 298
V ++ L+ K +++ GF + + H +F E+I+
Sbjct: 265 -----VASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELIL 300
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 39 GSNGVLLKNLYLS---CDPYMRPRMTNIKGSYVESFKP-GMPISGYGVAKVLDSENPEFK 94
G V+++N + D Y R G Y F P G+ G GV + + E FK
Sbjct: 27 GPQAVVVRNKAIGLNFIDTYYR------SGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFK 80
Query: 95 KGDLVWGMTG----WEEYSLVTAPQLFKIQHTDVPLSY-YTGILGMPGMTAYAGFYEVCS 149
GD V TG + E ++ L K+ + +S+ L + G+T +
Sbjct: 81 VGDRVAYGTGPLGAYSEVHVLPEANLVKLADS---VSFEQAAALMLKGLTVQYLLRQTYQ 137
Query: 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEP 209
K GE + AA+G VG L Q+AK LG ++G+ S +K K G E +Y E
Sbjct: 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHED 196
Query: 210 DLNEALKRYFPEGIDIYFENVG 231
L+ + + ++ VG
Sbjct: 197 VAKRVLELTDGKKCPVVYDGVG 218
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 11/177 (6%)
Query: 59 RMTNIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYS-LVTAPQLF 117
R NI PG SG + + L ++ GD V + ++ +V P F
Sbjct: 50 RQGNIDNPPKTPLVPGFECSG--IVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEF 107
Query: 118 KIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLG 177
+ D M +TAY +EV + ++G V + +A G VGQ V Q +
Sbjct: 108 VYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVP 167
Query: 178 CYVVGSAGSKDKIDLLKNKFG--FDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232
V S K + +K+ FD +Y +E +KR EG+DI + + G
Sbjct: 168 NVTVFGTASTFKHEAIKDSVTHLFDRNADYVQE------VKRISAEGVDIVLDCLCG 218
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 139 TAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF- 197
TAY + GE V I + SG VGQ A GC V + GS +K L+ +F
Sbjct: 1654 TAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFP 1713
Query: 198 GFDEA--FNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMIS 255
DE N ++ L+ +G+D+ ++ + L A + + HGR G
Sbjct: 1714 QLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIG--- 1770
Query: 256 QYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH----LYPKFLEMIIPHIKEGKIVYVED 311
+++L + ++L K V G L+ + + + E++ I+EG + ++
Sbjct: 1771 KFDLSNNHALGMAVFL--KNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKC 1828
Query: 312 MAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
A + G+++GK V+ V E
Sbjct: 1829 TVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 2/173 (1%)
Query: 134 GMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLL 193
G+ +TA+ EV GE V I +A+G VG AK++G + +AGS K ++L
Sbjct: 20 GVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML 79
Query: 194 KNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGM 253
++ G + + + +E L+ G+D+ ++ G+ + + + GR G
Sbjct: 80 -SRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGK 138
Query: 254 ISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKI 306
Y D G+ L + V ++ Y + L+ I+ H+ +GK+
Sbjct: 139 KDVYA-DASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKL 190
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK 196
G+TA+ E + G+ V + +G V Q AK G V+ ++ S++K+D
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA 231
Query: 197 FGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQ 256
G D N EE + G D E GG L L + GRI+V G++
Sbjct: 232 LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG 291
Query: 257 YNLDRPEG 264
+ + P G
Sbjct: 292 FEVSGPVG 299
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 16/202 (7%)
Query: 33 ELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLDSENPE 92
E+QV + G+ + Y+ Y P S G+ G+ + S
Sbjct: 30 EIQVENKAIGINFIDTYIRSGLYPPP-----------SLPSGLGTEAAGIVSKVGSGVKH 78
Query: 93 FKKGD-LVWGMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILG-MPGMTAYAGFYEVCSP 150
K GD +V+ + YS V K +S+ + G+T Y +
Sbjct: 79 IKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEI 138
Query: 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD 210
K E AA+G VG + Q+AK LG ++G+ G+ K K G + NY+EE D
Sbjct: 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE-D 196
Query: 211 LNEALKRYF-PEGIDIYFENVG 231
L E LK + + + +++VG
Sbjct: 197 LVERLKEITGGKKVRVVYDSVG 218
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 37/215 (17%)
Query: 71 FKPGMPISGYGVAKVLDSENPEFKKGDLVW------GMT---GWEEYS------LVTAPQ 115
F PG+ ++G V+ S++P F++GD V G+T G+ EY+ LV P+
Sbjct: 62 FVPGIDLAGV----VVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPK 117
Query: 116 LFKIQHTDVPLSYYTGILGMPGMTAYAGFYEV----CSPKQGECVFISAASGAVGQLVGQ 171
++ +G G TA + + +P++G V ++ A+G VG L
Sbjct: 118 GLTLKEAXA--------IGTAGFTAALSIHRLEEHGLTPERGP-VLVTGATGGVGSLAVS 168
Query: 172 FAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231
G V S G + D L+ G E E E ++ + + VG
Sbjct: 169 XLAKRGYTVEASTGKAAEHDYLR-VLGAKEVL--AREDVXAERIRPLDKQRWAAAVDPVG 225
Query: 232 GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVH 266
G+ L VL + G +AV G+ + P VH
Sbjct: 226 GRTLATVLSRXRYGGAVAVSGLTGGAEV--PTTVH 258
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK---IDLLK 194
+TAY ++ + GE + + +A+G VG Q A+ LG V +A S+DK ++L +
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA-SEDKWQAVELSR 389
Query: 195 NKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMI 254
++++ + L G+D+ ++ G+ DA L + GR G
Sbjct: 390 EHLASSRTCDFEQ-----QFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKT 444
Query: 255 SQYNLDRPEGVH-NLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMA 313
+ H + Y V + + H + +E+ + E V D+
Sbjct: 445 DVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLH---ELVELFEGRVLEPLPVTAWDVR 501
Query: 314 EGLESAPATLIGLFSGRNVGKQVVAVAP 341
+ AP L L R+VGK V+ + P
Sbjct: 502 Q----APEALRHLSQARHVGKLVLTMPP 525
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 72/185 (38%), Gaps = 32/185 (17%)
Query: 99 VWGMT----GWEEYSLVTAPQLF-KIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSP--- 150
+WG G E +LV + QL K H LS+ PG+ + ++ S
Sbjct: 171 IWGFETNFGGLAEIALVKSNQLMPKPDH----LSWEEA--AAPGLVNSTAYRQLVSRNGA 224
Query: 151 --KQGECVFISAASGAVGQLVGQFAKLLG----CYVVG--------SAGSKDKIDLLKNK 196
KQG+ V I ASG +G QFA G C V + G++ ID
Sbjct: 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEG 284
Query: 197 FGFDEAFNYKEEPDLNEALKRYFP----EGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
+ F + N ++ + KR E IDI FE+ G + A + + G I C
Sbjct: 285 YRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCA 344
Query: 253 MISQY 257
S Y
Sbjct: 345 STSGY 349
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 65 GSYVESFKPGMPISGYGVAKVLDS----ENPEFKKGDLVWGMT----GWEEYSLVTAPQL 116
G V +++PG + + ++ L+S ++ +WG G E +LV QL
Sbjct: 151 GPGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETNFGGLAEIALVKTNQL 210
Query: 117 F-KIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSP-----KQGECVFISAASGAVGQLVG 170
K +H L++ PG+ + ++ S KQG+ V I ASG +G
Sbjct: 211 MPKPKH----LTWEEA--AAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGLGSYAT 264
Query: 171 QFAKLLGCYVVGSAGSKDKIDLLKN--------------KFGFDE-AFNYKEEPDLNEAL 215
QFA G + S K ++ ++ KF DE + KE + +
Sbjct: 265 QFALAGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYKFWKDEHTQDPKEWKRFGKRI 324
Query: 216 KRYF-PEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQY 257
+ E IDI FE+ G + A + + G I C S Y
Sbjct: 325 RELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTCASTSGY 367
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 31/198 (15%)
Query: 72 KPGMPISGYGVAKVLDSENPE---FKKGDLVWGMTG--------WEEYSLVTA------- 113
+P I G +A + + PE F+ GD V+G+TG +++ V A
Sbjct: 61 QPLPAILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKP 120
Query: 114 PQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFA 173
L Q + +PL + +TA+ G + + G+ V I G VG + Q A
Sbjct: 121 AALTXRQASVLPLVF---------ITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIA 171
Query: 174 KLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233
G V +A D ++ +++ + EP+ + A + +G D+ ++ +GG
Sbjct: 172 LARGARVFATARGSD-LEYVRDLGA--TPIDASREPE-DYAAEHTAGQGFDLVYDTLGGP 227
Query: 234 MLDAVLLNMKIHGRIAVC 251
+LDA +K G + C
Sbjct: 228 VLDASFSAVKRFGHVVSC 245
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 38/234 (16%)
Query: 41 NGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVW 100
+GVL+K Y + Y G+ V + + I G V+ S +P F +GD V
Sbjct: 32 DGVLIKVAYSGIN-YKDGLAGKAGGNIVREYPLILGIDAAGT--VVSSNDPRFAEGDEVI 88
Query: 101 GMT---------GWEEYS------LVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFY 145
+ G EY+ LV PQ ++ V G G TA +
Sbjct: 89 ATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAXV--------YGTAGFTAALSVH 140
Query: 146 EV----CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE 201
+ SP++G + A G G V K G VV S G+++ D LK + G E
Sbjct: 141 RLEQNGLSPEKGSVLVTGATGGVGGIAVSXLNKR-GYDVVASTGNREAADYLK-QLGASE 198
Query: 202 AFNYKEEPD--LNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGM 253
+ ++ D L K+ + +D VGGK L ++L ++ G +AV G+
Sbjct: 199 VISREDVYDGTLKALSKQQWQGAVD----PVGGKQLASLLSKIQYGGSVAVSGL 248
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 105 WEEYSLVTAPQLFKI-QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASG 163
+++Y+ A Q I Q TD L+ IL G+T Y + + G V IS A+G
Sbjct: 125 FQQYATADAVQAAHIPQGTD--LAQVAPIL-CAGITVYKAL-KSANLMAGHWVAISGAAG 180
Query: 164 AVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215
+G L Q+AK +G V+G G + K +L ++ G + ++ +E D+ A+
Sbjct: 181 GLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEVFIDFTKEKDIVGAV 231
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/188 (18%), Positives = 80/188 (42%), Gaps = 13/188 (6%)
Query: 101 GMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISA 160
G W+EY +A F + D + + + +TA+ E + ++ + + ++A
Sbjct: 95 GEGTWQEYVKTSAD--FVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNA 152
Query: 161 ASGAVGQLVGQFAKLLGCYVVG-SAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF 219
A+G L Q +++L ++ + +K +LL + G + P ++
Sbjct: 153 CGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL--RLGAAYVIDTSTAPLYETVMELTN 210
Query: 220 PEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTK-RVRM 278
G D +++GG + + +++ +G G++S ++ E +VTK +V
Sbjct: 211 GIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGIQVNWAE-------IVTKAKVHA 263
Query: 279 EGFLVRDY 286
F +R +
Sbjct: 264 NIFHLRHW 271
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF 197
+TAY + + GE V + AA+GA+G Q A+ +G V+ +A +K+ L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 198 GFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQY 257
G +EA Y E P+ +A G+D+ E V GK ++ L + GR+ I
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIAPIPPL 223
Query: 258 NLDRPEGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKF 293
L R + L + +T +R EG LV + L P+
Sbjct: 224 RLMR-RNLAVLGFWLTPLLR-EGALVEEALGFLLPRL 258
>pdb|1VDY|A Chain A, Nmr Structure Of The Hypothetical Enth-Vhs Domain
At3g16270 From Arabidopsis Thaliana
pdb|2DCP|A Chain A, Fully Automated Nmr Structure Determination Of The
Enth-Vhs Domain At3g16270 From Arabidopsis Thaliana
Length = 140
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 168 LVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD------LNEALKRYFPE 221
+V Q A L Y VG +GS+ + ++ +N F+YK PD LN+A++ E
Sbjct: 64 IVKQKALRLIKYAVGKSGSEFRREMQRNSVAVRNLFHYKGHPDPLKGDALNKAVRETAHE 123
Query: 222 GIDIYFENVGG 232
I F G
Sbjct: 124 TISAIFSEENG 134
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF 197
+TAY + + GE V + AA+GA+G Q A+ +G V+ +A +K+ L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 198 GFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
G +EA Y E P+ +A G+D+ E V GK ++ L + GR+ G
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 45/124 (36%), Gaps = 18/124 (14%)
Query: 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKE--- 207
KQG+ V I ASG +G QF K G V S K ++ G D N E
Sbjct: 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-ALGCDLVINRAELGI 277
Query: 208 EPDLNEALKRYFPEGI--------------DIYFENVGGKMLDAVLLNMKIHGRIAVCGM 253
D+ + +R G DI FE+ G ++ + G + CG
Sbjct: 278 TDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGS 337
Query: 254 ISQY 257
S Y
Sbjct: 338 SSGY 341
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF 197
+TAY + + GE V + AA+GA+G Q A+ G V+ +A +K+ L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLA-LPLAL 169
Query: 198 GFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
G +EA Y E P+ +A G+D+ E V GK ++ L + GR+ G
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 27/178 (15%)
Query: 65 GSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWG--------MTGWEEYSLVTA--P 114
GS V+ FKPG + V+ + P+++ ++ G + GW+ ++
Sbjct: 69 GSEVKDFKPGDRV-------VVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFG 121
Query: 115 QLFKIQHTDVPLSYY------TGILGMPGMTAYAGFY--EVCSPKQGECVFISAASGAVG 166
+ F + D+ L++ + +P M GF+ E+ + K G+ V + G VG
Sbjct: 122 EFFHVNDADMNLAHLPKEIPLEAAVMIPDMMT-TGFHGAELANIKLGDTVCVIGI-GPVG 179
Query: 167 QLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGID 224
+ A LG + + GS+ + ++G + NYK + + LK +G+D
Sbjct: 180 LMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVD 237
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK 196
G+T Y G +V K G+ V IS G +G + Q+A+ +G V K+DL + +
Sbjct: 175 GVTVYKGL-KVTDTKPGDWVVISGI-GGLGHMAVQYARAMGLNVAAVDIDDRKLDLAR-R 231
Query: 197 FGFDEAFNYKEEPD 210
G N K D
Sbjct: 232 LGATVTVNAKTVAD 245
>pdb|4A7P|A Chain A, Se-Met Derivatized Ugdg, Udp-Glucose Dehydrogenase From
Sphingomonas Elodea
pdb|4A7P|B Chain B, Se-Met Derivatized Ugdg, Udp-Glucose Dehydrogenase From
Sphingomonas Elodea
Length = 446
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 272 VTKRVRMEGFLVRDYYHLY-PKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGL 326
V K R L ++ +Y P ++ ++K G++ + D+AEG++ A A I +
Sbjct: 37 VDKDARKIELLHQNVXPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAVFIAV 92
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.140 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,975,591
Number of Sequences: 62578
Number of extensions: 500013
Number of successful extensions: 1298
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1205
Number of HSP's gapped (non-prelim): 50
length of query: 342
length of database: 14,973,337
effective HSP length: 100
effective length of query: 242
effective length of database: 8,715,537
effective search space: 2109159954
effective search space used: 2109159954
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)