Your job contains 1 sequence.
>019334
MNIAVGARAGVIDPLFAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFMASLLCHI
VKNYIAHLLNVKVPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAGEPGK
LIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLSDNPTRV
SIGQDWRESDITNRIPIIFTGNDFSTIYAPLIRDGRMEKFYWQPNLEDILNIVHRMYEKD
GITKDEVGSIVKTFPNQALDFYGALRSRTYDRSISKWIDDIGGVENLGNKLLKRRKDKEL
PVFTPPEKTVEALLESGYSLLREQQLIMETKLSKEYMKNIDD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019334
(342 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2032687 - symbol:AT1G73110 species:3702 "Arabi... 1446 4.3e-148 1
TAIR|locus:2063922 - symbol:RCA "rubisco activase" specie... 807 2.2e-80 1
>TAIR|locus:2032687 [details] [associations]
symbol:AT1G73110 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
InterPro:IPR003959 Pfam:PF00004 EMBL:CP002684 GO:GO:0005524
GO:GO:0009535 HOGENOM:HOG000243931 ProtClustDB:PLN00020
UniGene:At.11687 UniGene:At.43232 EMBL:AF361834 EMBL:AY078044
EMBL:AK118942 IPI:IPI00532099 RefSeq:NP_177454.1
ProteinModelPortal:Q9AST9 SMR:Q9AST9 STRING:Q9AST9 PRIDE:Q9AST9
ProMEX:Q9AST9 EnsemblPlants:AT1G73110.1 GeneID:843642
KEGG:ath:AT1G73110 TAIR:At1g73110 InParanoid:Q9AST9 OMA:VEPVIMS
PhylomeDB:Q9AST9 Genevestigator:Q9AST9 Uniprot:Q9AST9
Length = 432
Score = 1446 (514.1 bits), Expect = 4.3e-148, P = 4.3e-148
Identities = 269/342 (78%), Positives = 311/342 (90%)
Query: 1 MNIAVGARAGVIDPLFAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFMASLLCHI 60
+NIAVGAR+G+ID +F G+FLGKDSDIVFDYRQK TRSFE+LQGDYYIAP F+ + HI
Sbjct: 91 VNIAVGARSGMIDDVFIGDFLGKDSDIVFDYRQKATRSFEHLQGDYYIAPSFLDKVAVHI 150
Query: 61 VKNYIAHLLNVKVPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAGEPGK 120
VKNY+A LN+K+PLILGIWGGKGQGK+FQTELIF+ MG+EPVIMSAGELES+RAGEPG+
Sbjct: 151 VKNYLAPSLNIKIPLILGIWGGKGQGKTFQTELIFKTMGVEPVIMSAGELESDRAGEPGR 210
Query: 121 LIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLSDNPTRV 180
LIR+RYRTASQV+QNQGKMS LMINDIDAGLGRFG TQMTVNNQIVVGTLMNL+DNPTRV
Sbjct: 211 LIRDRYRTASQVIQNQGKMSVLMINDIDAGLGRFGETQMTVNNQIVVGTLMNLADNPTRV 270
Query: 181 SIGQDWRESDITNRIPIIFTGNDFSTIYAPLIRDGRMEKFYWQPNLEDILNIVHRMYEKD 240
S+GQ+WRE+D+ NR+P+I TGNDFST+YAPLIR+GRMEKFYWQP EDI+NIV RMYEKD
Sbjct: 271 SVGQEWREADMVNRVPLIVTGNDFSTLYAPLIREGRMEKFYWQPTREDIVNIVSRMYEKD 330
Query: 241 GITKDEVGSIVKTFPNQALDFYGALRSRTYDRSISKWIDDIGGVENLGNKLLKRRKDKEL 300
GI++ +V SIV FPNQALDFYGALRSRTYDRSI KW+D+ GG+E LG LL+R+K +E+
Sbjct: 331 GISRKDVISIVDKFPNQALDFYGALRSRTYDRSILKWVDEAGGMETLGKVLLRRKKTQEV 390
Query: 301 PVFTPPEKTVEALLESGYSLLREQQLIMETKLSKEYMKNIDD 342
P FT PE+TVEALLESGYSL+ EQ+LIMETKLSKEYMKN+DD
Sbjct: 391 PQFTAPEQTVEALLESGYSLINEQKLIMETKLSKEYMKNMDD 432
>TAIR|locus:2063922 [details] [associations]
symbol:RCA "rubisco activase" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=IEA;IDA] [GO:0009507
"chloroplast" evidence=ISM;IDA;NAS] [GO:0030234 "enzyme regulator
activity" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0043531 "ADP binding" evidence=IDA]
[GO:0046863 "ribulose-1,5-bisphosphate carboxylase/oxygenase
activator activity" evidence=IDA] [GO:0009409 "response to cold"
evidence=IEP;RCA] [GO:0010319 "stromule" evidence=IDA] [GO:0042742
"defense response to bacterium" evidence=IEP;RCA] [GO:0016020
"membrane" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0010150 "leaf senescence" evidence=IMP] [GO:0000165 "MAPK
cascade" evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009637 "response to blue light" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009814 "defense response, incompatible interaction"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010114 "response to red light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0010200
"response to chitin" evidence=RCA] [GO:0010218 "response to far red
light" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0043900
"regulation of multi-organism process" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] [GO:0009416 "response to
light stimulus" evidence=IEP] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 GO:GO:0005634 GO:GO:0005618 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009753 GO:GO:0048046 GO:GO:0009409
GO:GO:0042742 GO:GO:0009941 GO:GO:0043531 GO:GO:0010150
GO:GO:0009416 GO:GO:0009535 GO:GO:0010287 GO:GO:0010319
EMBL:AC003000 UniGene:At.25263 EMBL:X14212 EMBL:M86720
EMBL:AY052703 EMBL:AF325049 EMBL:AY056108 EMBL:BT000710
EMBL:AY088487 IPI:IPI00518163 IPI:IPI00526733 PIR:S04048 PIR:T01002
PIR:T01003 RefSeq:NP_565913.1 RefSeq:NP_850320.1 UniGene:At.25299
UniGene:At.25319 UniGene:At.47493 ProteinModelPortal:P10896
SMR:P10896 IntAct:P10896 STRING:P10896 SWISS-2DPAGE:P10896
World-2DPAGE:0003:P10896 PaxDb:P10896 PRIDE:P10896 ProMEX:P10896
EnsemblPlants:AT2G39730.1 GeneID:818558 KEGG:ath:AT2G39730
TAIR:At2g39730 eggNOG:NOG316327 HOGENOM:HOG000243931
InParanoid:P10896 OMA:HIAKNFM PhylomeDB:P10896 ProtClustDB:PLN00020
Genevestigator:P10896 GO:GO:0046863 Uniprot:P10896
Length = 474
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 161/334 (48%), Positives = 226/334 (67%)
Query: 10 GVIDPLFAGNF-LGKDSDIV--FDYRQKVTRSF--EYLQGDYYIAPVFMASLLCHIVKNY 64
G++D +F G ++ ++Y + R + + + +YIAP FM L+ HI KN+
Sbjct: 90 GMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNF 149
Query: 65 IAHLLNVKVPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAGEPGKLIRE 124
+ L N+KVPLILGIWGGKGQGKSFQ EL+ MGI P++MSAGELES AGEP KLIR+
Sbjct: 150 LT-LPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQ 208
Query: 125 RYRTASQVVQNQGKMSCLMINDIDAGLGRFGNT-QMTVNNQIVVGTLMNLSDNPTRVSIG 183
RYR A+ +++ +GKM CL IND+DAG GR G T Q TVNNQ+V TLMN++DNPT V +
Sbjct: 209 RYREAADLIK-KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLP 267
Query: 184 QDWRESDITNRIPIIFTGNDFSTIYAPLIRDGRMEKFYWQPNLEDILNIVHRMYEKDGIT 243
+ + + R+PII TGNDFST+YAPLIRDGRMEKFYW P ED + + ++ D I
Sbjct: 268 GMYNKEE-NARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIK 326
Query: 244 KDEVGSIVKTFPNQALDFYGALRSRTYDRSISKWIDDIGGVENLGNKLLKRRKDKELPVF 303
+++ ++V FP Q++DF+GALR+R YD + K+++ +G VE +G +L+ R+ PVF
Sbjct: 327 DEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLG-VEKIGKRLVNSREGP--PVF 383
Query: 304 TPPEKTVEALLESGYSLLREQQLIMETKLSKEYM 337
PE T E L+E G L+ EQ+ + +L++ Y+
Sbjct: 384 EQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYL 417
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.139 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 342 342 0.00096 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 608 (65 KB)
Total size of DFA: 218 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.01u 0.09s 27.10t Elapsed: 00:00:02
Total cpu time: 27.01u 0.09s 27.10t Elapsed: 00:00:02
Start: Sat May 11 10:23:49 2013 End: Sat May 11 10:23:51 2013