Your job contains 1 sequence.
>019338
MGAGDNDDMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVS
LNQGESFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGN
FSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATN
GKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAA
KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG
KAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTCLVLY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019338
(342 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 380 4.0e-35 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 311 6.6e-35 2
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 315 9.5e-34 2
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 357 1.1e-32 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 355 1.8e-32 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 349 7.7e-32 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 340 6.9e-31 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 334 3.0e-30 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 328 1.3e-29 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 325 2.7e-29 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 298 4.7e-29 2
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 318 1.5e-28 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 313 5.0e-28 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 312 6.4e-28 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 307 2.2e-27 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 303 5.7e-27 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 308 1.8e-26 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 297 2.5e-26 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 295 4.0e-26 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 293 6.6e-26 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 292 8.4e-26 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 291 1.1e-25 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 282 9.7e-25 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 273 8.7e-24 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 265 6.1e-23 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 261 1.6e-22 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 200 9.8e-19 2
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 212 2.9e-16 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 213 1.5e-15 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 215 2.9e-15 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 205 7.0e-15 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 212 7.5e-15 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 202 9.7e-15 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 198 1.9e-13 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 194 1.9e-13 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 193 2.1e-13 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 171 1.6e-12 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 170 1.1e-11 2
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 175 1.4e-11 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 172 3.2e-11 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 178 6.3e-11 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 174 1.5e-10 1
UNIPROTKB|Q6Z1F9 - symbol:OSJNBa0033D24.39 "BHLH transcri... 153 1.7e-10 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 141 1.9e-10 2
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 169 2.1e-10 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 173 2.8e-10 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 169 4.1e-10 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 166 1.1e-09 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 144 1.6e-09 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 166 2.0e-09 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 164 3.2e-09 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 161 4.8e-09 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 161 4.8e-09 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 150 5.4e-09 2
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 160 5.4e-09 1
UNIPROTKB|Q69WX7 - symbol:P0417G12.19 "Basic helix-loop-h... 138 7.5e-09 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 146 2.0e-08 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 151 3.0e-08 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 150 3.3e-08 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 147 4.1e-08 2
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 142 4.6e-08 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 150 6.0e-08 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 148 1.2e-07 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 138 5.8e-07 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 136 7.6e-07 1
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 137 9.0e-07 2
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 137 1.0e-06 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 139 1.3e-06 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 134 1.6e-06 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 134 2.3e-06 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 131 2.6e-06 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 132 4.3e-06 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 128 5.4e-06 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 128 6.3e-06 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 130 6.9e-06 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 132 8.1e-06 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 125 1.1e-05 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 130 1.1e-05 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 121 1.4e-05 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 119 1.7e-05 2
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 127 2.3e-05 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 127 2.3e-05 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 124 3.6e-05 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 125 4.5e-05 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 119 5.6e-05 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 120 5.7e-05 2
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 120 9.6e-05 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 120 0.00010 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 122 0.00014 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 115 0.00014 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 122 0.00018 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 114 0.00029 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 116 0.00030 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 115 0.00041 1
TAIR|locus:2199307 - symbol:AT1G68240 species:3702 "Arabi... 109 0.00042 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 112 0.00045 2
UNIPROTKB|Q6Z339 - symbol:B1121A12.20 "Os02g0726700 prote... 115 0.00047 1
UNIPROTKB|Q2QML8 - symbol:LOC_Os12g40730 "Helix-loop-heli... 114 0.00063 2
TAIR|locus:2090679 - symbol:AT3G19500 species:3702 "Arabi... 111 0.00081 1
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 107 0.00097 1
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 97/176 (55%), Positives = 114/176 (64%)
Query: 154 ERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSS 213
ER R S+EDH + A+ + + ++R PE+ S N K VE E Q+DP +
Sbjct: 117 ERLIRAGESSHEDHHQVSDDAV-LGASPVGKRRLPEAESQWNK-KAVE-EFQEDPQRGND 173
Query: 214 GILXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSL 272
N + K+ K+SS S EAPKE YIHMRA+RGQATNSHSL
Sbjct: 174 ------------QSQKKHKNDQSKETVN--KESSQSEEAPKENYIHMRARRGQATNSHSL 219
Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVK 328
AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE F+++K
Sbjct: 220 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE---FLSMK 272
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 311 (114.5 bits), Expect = 6.6e-35, Sum P(2) = 6.6e-35
Identities = 63/89 (70%), Positives = 77/89 (86%)
Query: 245 DSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVM 304
D + S + K+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+M
Sbjct: 244 DKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 303
Query: 305 LDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
LDEIINYVQSLQ+QVE F+++K N
Sbjct: 304 LDEIINYVQSLQRQVE---FLSMKLSSVN 329
Score = 83 (34.3 bits), Expect = 6.6e-35, Sum P(2) = 6.6e-35
Identities = 35/149 (23%), Positives = 66/149 (44%)
Query: 62 NQGESFGVSSMVSHNEFA-P-SYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSG 119
N G+ +G+++ ++ +A P S P +T+ + + S DP F E + FGS
Sbjct: 95 NIGDIYGITASNGNSCYATPMSSPPPGSMMETKTTTPMAELSGDPGFAERAARFSCFGSR 154
Query: 120 NFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVAT 179
+F+ +S P N + PP + E +S V + H E++ ++
Sbjct: 155 SFNSRTNS-PFPINNE------PP--ITTNEKMPRVSSSPVFKPLASHVPAGESSGELSR 205
Query: 180 NGKTRKRAPESNSLLNTDKNVEVELQKDP 208
KT+ + S S +++ K +E + DP
Sbjct: 206 KRKTKSKQ-NSPSAVSSSKEIEEKEDSDP 233
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 315 (115.9 bits), Expect = 9.5e-34, Sum P(2) = 9.5e-34
Identities = 62/83 (74%), Positives = 74/83 (89%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+YIH+RA+RGQAT+SHSLAERVRREKI ERM+LLQ+LVPGCNK+TGKA+MLDEIIN
Sbjct: 293 EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 352
Query: 311 YVQSLQQQVEVCYFMAVKWRHFN 333
YVQSLQ+QVE F+++K N
Sbjct: 353 YVQSLQRQVE---FLSMKLSSVN 372
Score = 74 (31.1 bits), Expect = 9.5e-34, Sum P(2) = 9.5e-34
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 62 NQGESFGVSSMVSHNEFA-----PSYPVALENQGMSS-TSNLDQYSSDPSFVELVPKIPG 115
N GE +G S + +A P P +Q M + T+ L ++S+DP F E +
Sbjct: 107 NSGEIYGTPMSRSASCYATPMSSPPPPTNSNSQMMMNRTTPLTEFSADPGFAERAARFSC 166
Query: 116 FGSGNFSEMVSSFGLPEN 133
FGS +F+ ++ LP N
Sbjct: 167 FGSRSFNGRTNT-NLPIN 183
Score = 40 (19.1 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 89 QGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSE 123
+G S + + S PSF + K G G SE
Sbjct: 227 KGKSKENPISTASPSPSFSKTAEKNGGKGGSKSSE 261
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 107/268 (39%), Positives = 140/268 (52%)
Query: 83 PVALENQGMSSTSNLDQYSSDPSFVELVPKIPGF------GSGNFSEM-VSSFGLPENAQ 135
P+ LEN + +LDQ+ +DP F E ++ GF G G + + FGLP+
Sbjct: 103 PI-LEN--LMPMGHLDQFLADPGFAERAARLSGFDARGGGGGGGYGGAGPAQFGLPDAGA 159
Query: 136 IASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLN 195
+S KE N+R+ S + E A++G RKR
Sbjct: 160 AGAS---------KE-MELGNTRDESSVSDPAPGGAEIPPKGASDGNARKRKASGKGK-G 208
Query: 196 TDKNVEVELQKDPSGDSSGI-LXXXXXXXXXXXXNTG------ANMRGKQAAKPTKDSSL 248
D + K+ DSSG N+G +N K KDSS
Sbjct: 209 KDSPMSTSAAKE---DSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSS 265
Query: 249 SG-EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 307
E PK+YIH+RA+RG+AT+SHSLAERVRREKIS+RM+LLQ+LVPGCNK+ GKAVMLDE
Sbjct: 266 KPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDE 325
Query: 308 IINYVQSLQQQVEVCYFMAVKWRHFNLQ 335
IINYVQSLQ+QVE F+++K N Q
Sbjct: 326 IINYVQSLQRQVE---FLSMKLATVNPQ 350
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 102/261 (39%), Positives = 132/261 (50%)
Query: 90 GMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSS-F-GLPENAQIASSGCPPNYVP 147
GM S + + P FV+ P + GN M++ F G+ + +G P
Sbjct: 79 GMLSAGAPPPFVATPGFVDSTAGFPCYNGGNLGAMINHPFPGIHQPLGDFQNGVEP--CR 136
Query: 148 NKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKD 207
E S+NVSQ+ E Q E V ++ K P N D+ V K
Sbjct: 137 EIEDIEIEGSKNVSQTGEKQQGDGETTHAVDSSSKELSM-PGRNGGAGHDEGTRVSCSKK 195
Query: 208 P--SGDSSGI--------LXXXXXXXXXXXXNTGANMR-----GKQAAKPTKDSSLSGEA 252
SG G+ L G R GK + K KD++ G
Sbjct: 196 RKRSGQDGGVKHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNA--GSP 253
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
++YIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYV
Sbjct: 254 KEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYV 313
Query: 313 QSLQQQVEVCYFMAVKWRHFN 333
QSLQ+QVE F+++K N
Sbjct: 314 QSLQRQVE---FLSMKLASVN 331
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 90/234 (38%), Positives = 124/234 (52%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQ-IASSGCPPNYVPNKEGCYER 155
L + D F+E + FG G + +G + A A G + +
Sbjct: 94 LGHFPVDSGFIERAARSTCFGGGMMAG--GPYGAADQAMGDAFGGTAEGLMDHHRNVGND 151
Query: 156 NSRNVSQSYEDHQICEEAAIG-VATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSG 214
+ + + D E A G ++ G K+ N ++ TD+ L D + +S
Sbjct: 152 KAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSDSANES-- 209
Query: 215 ILXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAE 274
+ G +GK AK T +S +EYIH+RA+RGQATNSHSLAE
Sbjct: 210 VHSKDKGEESSPATTNGGKSKGK-GAKETSESQ-----KEEYIHVRARRGQATNSHSLAE 263
Query: 275 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVK 328
R+RREKISERM+LLQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVE F+++K
Sbjct: 264 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE---FLSMK 314
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 85/180 (47%), Positives = 110/180 (61%)
Query: 157 SRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNS-LLNTDKNVEVELQKDPSGDSSGI 215
S NVS+ + + ++N K RKR + NS + ++ + E + D +GD
Sbjct: 211 SGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRN 270
Query: 216 LXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAER 275
N+G +GKQ++ P KD YIH+RA+RGQATNSHSLAER
Sbjct: 271 -DEQSPNSPGKKSNSG-KQQGKQSSDPPKDG---------YIHVRARRGQATNSHSLAER 319
Query: 276 VRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQ 335
VRREKISERM+ LQ+LVPGCNK+TGKAVMLDEIINYVQSLQ+QVE F+++K N Q
Sbjct: 320 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE---FLSMKLATVNPQ 376
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 97/251 (38%), Positives = 131/251 (52%)
Query: 81 SYPVALENQGMSSTSNLDQYSSDPSFVELVP-KIPGFGSGNFSEMVSSFGLPENAQIASS 139
S P N+G L +Y ++P E+ P + F S N S++ +F P + I
Sbjct: 19 SDPFGNGNEGTIGDF-LGRYCNNPQ--EISPLTLQSF-SLN-SQISENF--PISGGIRFP 71
Query: 140 GCPPNYVPNKE-GCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDK 198
P + ++E G + S D + +N + RK P N +
Sbjct: 72 PYPGQFGSDREFGSQPTTQESNKSSLLDPDSVSDRVHTTKSNSRKRKSIPSGNGKESPAS 131
Query: 199 NVEVELQKDPSGDSSGILXXXXXXXXXXXXNTGANMRGKQAAK-PTKDSSLSGEAPKEYI 257
+ SG++ G + N K +K KD + EAPK+YI
Sbjct: 132 SSLTASNSKVSGENGG--SKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYI 189
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H+RA+RGQAT+SHSLAER RREKISERM LLQ+LVPGCN+ITGKAVMLDEIINYVQSLQ+
Sbjct: 190 HVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQR 249
Query: 318 QVEVCYFMAVK 328
QVE F+++K
Sbjct: 250 QVE---FLSMK 257
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 94/241 (39%), Positives = 124/241 (51%)
Query: 96 NLDQYSSDPSFVELVPKIPGFGSGNF--SEMVSSFGLPENAQI------ASSGCPPNYVP 147
N+ Q+ +D F+E K FG G ++ SS G+P++ + SG + P
Sbjct: 73 NMAQFPADSGFIERAAKFSFFGCGEMMMNQQQSSLGVPDSTGLFLQDTQIPSGSKLDNGP 132
Query: 148 NKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKD 207
+ R+++ ED Q A G+T + S K+ E E K
Sbjct: 133 LTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKK 192
Query: 208 PSGDSSGILXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQAT 267
+ S + AN + K DS G YIHMRA+RGQAT
Sbjct: 193 QKDEQSP--------------TSNANKTNSE--KQPSDSLKDG-----YIHMRARRGQAT 231
Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAV 327
NSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ Q+E F+++
Sbjct: 232 NSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIE---FLSM 288
Query: 328 K 328
K
Sbjct: 289 K 289
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 100/271 (36%), Positives = 136/271 (50%)
Query: 84 VALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPP 143
VA G LD+ DP F E ++ F +G + +G A G PP
Sbjct: 32 VAPGGGGGGGDCGLDKLCGDPGFAERAARLSSFNNGG-GGVGQRYG---GAGAGLFGMPP 87
Query: 144 NYVPNKEGCYERNSRNVSQ----SYEDHQICEE-----AAIGVATNGKTRK----RAPES 190
+ G R + +VS + +D + AA A GK ++ ES
Sbjct: 88 PAPGDFAGGGSREASSVSDPASSAMKDAAANAKKRKSTAAAAAAAKGKGKEPPVGEEKES 147
Query: 191 NSLLNTDKNVEVELQKDPSGDSSGILXXXXXXXXXXXXNTGANMRGK-QAAKPTKDSSLS 249
+ N E E P + +G G +GK + AKP
Sbjct: 148 DGKRCKTGNGEKESSVKPKAEQAG------SDSSVEDGGGGGQKQGKGKNAKPV------ 195
Query: 250 GEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
E PK+Y+H+RA+RGQAT+SHSLAERVRRE+IS+RM++LQ+LVPGCNK+ GKA+MLDEII
Sbjct: 196 -EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 310 NYVQSLQQQVEVCYFMAVKWRHFN-LQFTCL 339
NYVQSLQ+QVE F+++K N L F+ L
Sbjct: 255 NYVQSLQRQVE---FLSMKLATVNPLDFSNL 282
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 298 (110.0 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 64/110 (58%), Positives = 82/110 (74%)
Query: 230 TGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLL 288
T +M+GK T+ SS E K +YIH+RA+RG+AT+ HSLAER RREKIS++M+ L
Sbjct: 114 TEPSMKGKSNMSNTETSS---EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCL 170
Query: 289 QELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTC 338
Q++VPGCNK+TGKA MLDEIINYVQSLQQQVE F+++K N + C
Sbjct: 171 QDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE---FLSMKLSVINPELEC 217
Score = 40 (19.1 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 177 VATNGKTR------KRAPESNSLLNTDKNVEVELQKDPS 209
V NG +R KR PE + K ++ E + +PS
Sbjct: 79 VKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPS 117
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 66/94 (70%), Positives = 81/94 (86%)
Query: 237 KQAAK-PTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
K +K +K+ S G+ KE Y+H+RAKRGQATNSHSLAER+RR+KISERM+LLQ+LVPG
Sbjct: 123 KSCSKMQSKEDSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPG 182
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVK 328
C+KITGKAVMLDEIINYVQSLQ+QVE F+++K
Sbjct: 183 CSKITGKAVMLDEIINYVQSLQRQVE---FLSMK 213
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 79/172 (45%), Positives = 105/172 (61%)
Query: 169 ICEEAAIGVATNG---KTRKRAP-----ESNSLLNTDKNVEVELQKDPSGDSSGILXXXX 220
+ EA+ G ++G RKR P ESNS+ + + + Q+ D +
Sbjct: 65 LAPEASNGSGSSGGGGSFRKRRPDDAKGESNSICKRQRGKQQQQQQPCHPDQ---MAAAV 121
Query: 221 XXXXXXXXNTGANMRGKQAA---KP-TKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERV 276
GA + + A+ P T S+++ +YIH+RA+RGQAT+SHSLAERV
Sbjct: 122 GKGRPERARPGAKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERV 181
Query: 277 RREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVK 328
RRE+ISERMR LQELVPGCNK+TGKA MLDEIINYVQSLQ+QVE F+++K
Sbjct: 182 RRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVE---FLSMK 230
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 65/94 (69%), Positives = 80/94 (85%)
Query: 236 GKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
GK K KD+ GEA KE Y H+RA++GQATN+HSLAER+RREKISERM+LLQ+LVPG
Sbjct: 155 GKSKGKGAKDA---GEAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPG 211
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVK 328
C+K+TGKA+MLDEIINYVQSLQ+QVE F+++K
Sbjct: 212 CSKVTGKALMLDEIINYVQSLQRQVE---FLSMK 242
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 63/100 (63%), Positives = 80/100 (80%)
Query: 229 NTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLL 288
N+ + G+++ K + S E P +YIH+RA+RGQAT+SHSLAERVRREKISERMR L
Sbjct: 108 NSKEGVEGRKSKKQKRGSK--EEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTL 165
Query: 289 QELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVK 328
Q LVPGC+K+TGKA+MLDEIINYVQ+LQ QVE F+++K
Sbjct: 166 QNLVPGCDKVTGKALMLDEIINYVQTLQTQVE---FLSMK 202
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
K K+++ GE P YIH+RA+RGQAT+SHSLAERVRREKISERM++LQ LVPGC+K+TG
Sbjct: 163 KKAKEAA-GGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTG 221
Query: 301 KAVMLDEIINYVQSLQQQVEVCYFMAVK 328
KA+MLDEII+YVQSLQ QVE F+++K
Sbjct: 222 KALMLDEIISYVQSLQNQVE---FLSMK 246
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 308 (113.5 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 64/92 (69%), Positives = 77/92 (83%)
Query: 237 KQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCN 296
+ A + D+ S E EY+H+RAKRGQATNSHSLAER RREKI+ERM+LLQ+LVPGCN
Sbjct: 609 EHAGEKAGDADASRE---EYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCN 665
Query: 297 KITGKAVMLDEIINYVQSLQQQVEVCYFMAVK 328
KITGKA+MLDEIINYVQSLQ+QVE F+++K
Sbjct: 666 KITGKAMMLDEIINYVQSLQRQVE---FLSMK 694
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 72/176 (40%), Positives = 101/176 (57%)
Query: 157 SRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDP---SGDSS 213
+R+ +D EE+ + T G ++ + NS ++ K V + SGD
Sbjct: 48 TRSEHSGNKDVSAAEESTVTDLTAGWGSRKTRDLNSEDDSSKMVSSSSSGNELKESGDKK 107
Query: 214 GILXXXXXXXXXXXXNT-GANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSL 272
L G G +K T+ + E PK+YIH+RA+RGQAT+ HSL
Sbjct: 108 RKLCGSESGNGDGSMRPEGETSSGGGGSKATEQKN-KPEPPKDYIHVRARRGQATDRHSL 166
Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVK 328
AER RREKISE+M LQ+++PGCNKI GKA++LDEIINY+QSLQ+QVE F+++K
Sbjct: 167 AERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVE---FLSMK 219
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 58/91 (63%), Positives = 74/91 (81%)
Query: 243 TKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
T+ E K+YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA
Sbjct: 120 TEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 179
Query: 303 VMLDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
++LDEIINY+QSLQ+QVE F+++K N
Sbjct: 180 LVLDEIINYIQSLQRQVE---FLSMKLEAVN 207
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 61/105 (58%), Positives = 79/105 (75%)
Query: 230 TGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLL 288
T A + A+K + E PK+ YIH+RA+RGQAT+SHSLAER RREKISERM++L
Sbjct: 106 TEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKIL 165
Query: 289 QELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
Q+LVPGCNK+ GKA +LDEIINY+Q+LQ+QVE F+++K N
Sbjct: 166 QDLVPGCNKVIGKASVLDEIINYIQALQRQVE---FLSMKLEAVN 207
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 61/88 (69%), Positives = 77/88 (87%)
Query: 243 TKDSS-LSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
+ DSS ++ E K +YIH+RA+RGQAT+SHS+AERVRREKISERM+ LQ+LVPGC+KITG
Sbjct: 154 SNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITG 213
Query: 301 KAVMLDEIINYVQSLQQQVEVCYFMAVK 328
KA MLDEIINYVQSLQ+Q+E F+++K
Sbjct: 214 KAGMLDEIINYVQSLQRQIE---FLSMK 238
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/95 (61%), Positives = 73/95 (76%)
Query: 230 TGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLL 288
T A ++K ++ E PK+ YIH+RA+RGQAT+SHSLAER RREKISERM++L
Sbjct: 98 TEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKIL 157
Query: 289 QELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCY 323
Q+LVPGCNK+ GKA +LDEIINY+QSLQ QVE +
Sbjct: 158 QDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFMF 192
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 68/146 (46%), Positives = 93/146 (63%)
Query: 190 SNSLLNTDKNVEVELQKD----P---SGDSSGILXXXXXXXXXXXXNTGANMRGKQAAKP 242
++S L++D N+ E +K P S ++SG+ TG+ RGK+ K
Sbjct: 76 TSSFLHSDHNIVDETKKRKALLPTLSSSETSGV----SDNTNVIATETGSLRRGKRLKKK 131
Query: 243 TKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
++ E +E +H+RA+RGQAT+SHSLAERVRR KI+ER+R LQ++VPGC K G A
Sbjct: 132 KEEED---EKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMA 188
Query: 303 VMLDEIINYVQSLQQQVEVCYFMAVK 328
MLDEIINYVQSLQ QVE F+++K
Sbjct: 189 TMLDEIINYVQSLQNQVE---FLSMK 211
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 55/88 (62%), Positives = 72/88 (81%)
Query: 235 RGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVP 293
R K+ TK + S E+ K Y+H+RA+RGQAT++HSLAER RREKI+ RM+LLQELVP
Sbjct: 160 REKKVKSSTKKNKSSVESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVP 219
Query: 294 GCNKITGKAVMLDEIINYVQSLQQQVEV 321
GC+KI G A++LDEIIN+VQ+LQ+QVE+
Sbjct: 220 GCDKIQGTALVLDEIINHVQTLQRQVEM 247
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 54/99 (54%), Positives = 75/99 (75%)
Query: 230 TGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQ 289
+G+ R K++ + + + PK+ +H+RAKRGQAT+SHSLAERVRREKI+ER++ LQ
Sbjct: 75 SGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQ 134
Query: 290 ELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVK 328
+LVPGC K G AVMLD II+YV+SLQ Q+E F+++K
Sbjct: 135 DLVPGCYKAMGMAVMLDVIIDYVRSLQNQIE---FLSMK 170
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 57/140 (40%), Positives = 85/140 (60%)
Query: 189 ESNSLLNTDKNVEVELQKDPSGDSSGILXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSL 248
ES+S +T K + ++ + ++S N + + + + + +
Sbjct: 78 ESSSQFDTKKRKSL-MEAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSRRGKRSKNR 136
Query: 249 SGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 308
E +E +H+RA+RGQAT+SHS+AERVRR KI+ER++ LQ++VPGC K G A MLDEI
Sbjct: 137 EEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEI 196
Query: 309 INYVQSLQQQVEVCYFMAVK 328
INYVQSLQ QVE F+++K
Sbjct: 197 INYVQSLQNQVE---FLSMK 213
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 200 (75.5 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 235 RGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
+GK + K K S + + P Y+H+RA+RGQAT+SHSLAER RREKI+ RM+LLQELVPG
Sbjct: 182 KGKSSTKKNKSSEENEKLP--YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPG 239
Query: 295 CNKIT 299
C+K T
Sbjct: 240 CDKGT 244
Score = 85 (35.0 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 17/25 (68%), Positives = 23/25 (92%)
Query: 297 KITGKAVMLDEIINYVQSLQQQVEV 321
+I G A++LDEIIN+VQSLQ+QVE+
Sbjct: 289 RIQGTALVLDEIINHVQSLQRQVEM 313
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 212 (79.7 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 48/92 (52%), Positives = 64/92 (69%)
Query: 231 GANMRGKQAAKPTKD-SSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQ 289
G M ++ +P S+ S ++ +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQ
Sbjct: 70 GPTMGSQEGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQ 129
Query: 290 ELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
ELVP NK T KA MLDEII YV+ LQ QV+V
Sbjct: 130 ELVPNTNK-TDKASMLDEIIEYVRFLQLQVKV 160
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 213 (80.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 47/84 (55%), Positives = 60/84 (71%)
Query: 238 QAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 297
QA+ T P+ +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK
Sbjct: 117 QASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK 176
Query: 298 ITGKAVMLDEIINYVQSLQQQVEV 321
T KA MLDEII+YV+ LQ QV+V
Sbjct: 177 -TDKASMLDEIIDYVKFLQLQVKV 199
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 215 (80.7 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 48/92 (52%), Positives = 63/92 (68%)
Query: 231 GANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQE 290
G G AA+P ++ G +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQE
Sbjct: 222 GGTASGGGAAQPQAGAAGGGAPAPPRQRVRARRGQATDPHSIAERLRRERIAERMKALQE 281
Query: 291 LVPGCNKI--TGKAVMLDEIINYVQSLQQQVE 320
LVP NK+ T KA MLDEII+YV+ LQ QV+
Sbjct: 282 LVPNANKLMQTDKASMLDEIIDYVKFLQLQVK 313
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 205 (77.2 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 47/93 (50%), Positives = 66/93 (70%)
Query: 231 GANMRGKQAAKPTKDSSLSGEA--PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLL 288
G+ + + ++ T ++ G P+ +RA+RGQAT+ HS+AER+RRE+I+ERM+ L
Sbjct: 100 GSGGQTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSL 159
Query: 289 QELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
QELVP NK T KA MLDEII+YV+ LQ QV+V
Sbjct: 160 QELVPNGNK-TDKASMLDEIIDYVKFLQLQVKV 191
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 212 (79.7 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 49/81 (60%), Positives = 59/81 (72%)
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
K S APK + RA+RGQAT+ HS+AER+RREKIS+RM+ LQELVP NK T
Sbjct: 298 KGNGSGSAGNGAPKPRV--RARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TN 354
Query: 301 KAVMLDEIINYVQSLQQQVEV 321
KA MLDEII+YV+ LQ QV+V
Sbjct: 355 KASMLDEIIDYVKFLQLQVKV 375
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 202 (76.2 bits), Expect = 9.7e-15, P = 9.7e-15
Identities = 43/70 (61%), Positives = 57/70 (81%)
Query: 252 APKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
AP+ + RA+RGQAT+ HS+AER+RRE+I+ERMR LQELVP NK T +A MLDEI++Y
Sbjct: 128 APRPKV--RARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDY 184
Query: 312 VQSLQQQVEV 321
V+ L+ QV+V
Sbjct: 185 VKFLRLQVKV 194
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 198 (74.8 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 45/76 (59%), Positives = 55/76 (72%)
Query: 246 SSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVML 305
+S G + RA+RGQAT+ HS+AER+RREKISERM+ LQ LVP NK KA ML
Sbjct: 226 NSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASML 284
Query: 306 DEIINYVQSLQQQVEV 321
DEII+YV+ LQ QV+V
Sbjct: 285 DEIIDYVKFLQLQVKV 300
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 194 (73.4 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 39/63 (61%), Positives = 54/63 (85%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 319 VEV 321
V+V
Sbjct: 205 VKV 207
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 193 (73.0 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 39/63 (61%), Positives = 54/63 (85%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 319 VEV 321
V+V
Sbjct: 203 VKV 205
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 171 (65.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 36/62 (58%), Positives = 48/62 (77%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISER+R LQELVP +K T A MLD ++Y++ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 319 VE 320
V+
Sbjct: 129 VK 130
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 170 (64.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 319 VEV 321
++
Sbjct: 339 YKI 341
Score = 50 (22.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 32/141 (22%), Positives = 54/141 (38%)
Query: 66 SFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQYSS-DPS-FVELVPKIPGFGSGNFSE 123
S GV+ + +F PV+L N +S + L +PS F+ L P P G +
Sbjct: 51 SNGVNGDLGSPKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGIMNS 110
Query: 124 M-VSSF-GL------P-ENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAA 174
+ + F G+ P E+ + S P N S +YE+ + +
Sbjct: 111 VGLDQFLGINNHHTKPVESNLLRQSSSPAGMFTNLSDQNGYGSMRNLMNYEEDEESPSNS 170
Query: 175 IGVATNGKTRKRAPESNSLLN 195
G+ + R P S +L+
Sbjct: 171 NGLRRHCSLSSRPPSSLGMLS 191
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 175 (66.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 43/97 (44%), Positives = 64/97 (65%)
Query: 232 ANMRGKQAAK--PTKDSSLSGEAPKEYIH------MRAKRGQATNSHSLAERVRREKISE 283
+ M+G+Q++ PT SS+S + + +RAKRG AT+ S+AERVRR +IS+
Sbjct: 149 SQMKGEQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISD 208
Query: 284 RMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
R+R LQELVP +K T A ML+E + YV+ LQ+Q++
Sbjct: 209 RIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQ 245
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 172 (65.6 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 35/62 (56%), Positives = 48/62 (77%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A ML+E + YV++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 319 VE 320
++
Sbjct: 241 IQ 242
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 178 (67.7 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 52/170 (30%), Positives = 80/170 (47%)
Query: 155 RNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQK-DPSGDSS 213
R S VS S E+ + T+G + K V + + +G SS
Sbjct: 173 RESTQVSPSATPSAAASESGLTRRTDGTDSSAVAGGGAYNRKGKAVAMTAPAIEITGTSS 232
Query: 214 GILXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSLSGEAPKE--YIHMRAKRGQATNSHS 271
++ N R ++ A T ++ E K+ KR +A H+
Sbjct: 233 SVVSKSEIEPEKT--NVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHN 290
Query: 272 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
L+ER RR++I+ERM+ LQEL+P CNK + KA MLDE I Y++SLQ Q+++
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 339
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 174 (66.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 62/215 (28%), Positives = 103/215 (47%)
Query: 122 SEMVSSFGLPENAQIA--SSGCP---PNYVPNKEGCYERNSRNVSQS-YEDHQICEEAAI 175
SE V PE Q+ CP P +P + +S + ++ E + + +
Sbjct: 105 SETVKPKSSPEPPQVMVKPKACPDPPPQVMPPPKFRLTNSSSGIRETEMEQYSV---TTV 161
Query: 176 GVATNGKTRKRAPESNSLLNT-DKNVEVELQKDPS---GDSSGILXXXXXXXXXXXXNTG 231
G + G + S+ + KN+E +L + S G SSG
Sbjct: 162 GPSHCGSNPSQNDLDVSMSHDRSKNIEEKLNPNASSSSGGSSGCSFGKDIKEMASGRCIT 221
Query: 232 ANMRGKQAAKPTKDSSLSGEAPKEYIHMRA---KRGQATNSHSLAERVRREKISERMRLL 288
+ + K+ + SLS +A + R+ +R +A H+L+ER RR++I+ERM+ L
Sbjct: 222 TDRKRKRINHTDESVSLS-DAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKAL 280
Query: 289 QELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCY 323
QEL+P C+K T KA +LDE I+Y++SLQ Q++V +
Sbjct: 281 QELIPHCSK-TDKASILDEAIDYLKSLQLQLQVMW 314
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 153 (58.9 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 29/36 (80%), Positives = 34/36 (94%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
MR+LQ LVPGC+K+TGKA++LDEIINYVQSLQ QVE
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVE 36
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 141 (54.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 31/46 (67%), Positives = 38/46 (82%)
Query: 276 VRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ QV+V
Sbjct: 251 LRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKV 295
Score = 76 (31.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 20/73 (27%), Positives = 28/73 (38%)
Query: 204 LQKDPSGDSSGILXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKR 263
+Q P G + G AA + P++ RA+R
Sbjct: 159 MQPPPFGQGGSMPAQSFGGGAAASGGGGGGSASAAAAAGASSGGGAAAPPRQ--RQRARR 216
Query: 264 GQATNSHSLAERV 276
GQAT+ HS+AERV
Sbjct: 217 GQATDPHSIAERV 229
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 169 (64.5 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
KR +A H+LAER RREKI+ERM+ LQ+L+P CNK T K ML+++I YV+SL+ Q+
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQI 203
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 173 (66.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 35/71 (49%), Positives = 51/71 (71%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
EA + +KR ++ H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I
Sbjct: 329 EAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIE 387
Query: 311 YVQSLQQQVEV 321
Y++SLQ QV++
Sbjct: 388 YLKSLQLQVQI 398
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 169 (64.5 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 36/62 (58%), Positives = 46/62 (74%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISERMR LQ+LVP + T A MLD + Y++ LQ+Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 319 VE 320
V+
Sbjct: 364 VK 365
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 33/62 (53%), Positives = 48/62 (77%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
+R +A H+L+ER RR++I+E++R LQELVP CNK T KA +LDE I Y++SLQ QV++
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 283
Query: 322 CY 323
+
Sbjct: 284 MW 285
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 144 (55.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 27/60 (45%), Positives = 45/60 (75%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
+R ++ H+ +ER RR++I+E+++ LQEL+P C K T K MLDE I+Y++SLQ Q+++
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 68
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 166 (63.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 33/60 (55%), Positives = 46/60 (76%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
KR + H+L+ER RR++I+E+MR LQEL+P CNKI KA MLDE I Y+++LQ QV++
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 367
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 164 (62.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 32/60 (53%), Positives = 47/60 (78%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
KR +A + H+L+ER RRE+I+ERM+ LQEL+P C K T K ML+++I YV+SLQ Q+++
Sbjct: 354 KRSRAADMHNLSERRRRERINERMKTLQELLPRCRK-TDKVSMLEDVIEYVKSLQLQIQM 412
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 161 (61.7 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 31/62 (50%), Positives = 49/62 (79%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
+R +A H+L+ER RR++I+ERM+ LQEL+P C++ T KA +LDE I+Y++SLQ Q++V
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQV 311
Query: 322 CY 323
+
Sbjct: 312 MW 313
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 161 (61.7 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR + H+LAER RREKI+E+M+ LQ+L+P CNK T K LD+ I YV+SLQ Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQ 309
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 150 (57.9 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 236 GKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGC 295
G++ K K SS +G+A + H A +H+L E+ RR KI+ER R LQ LVPGC
Sbjct: 61 GERKKKKKKASSAAGKASR---HRHA-----AGAHNLTEKRRRFKITERFRTLQRLVPGC 112
Query: 296 NKITGKAVMLDEIINYVQSLQQQVE 320
+ + +A LD+ I Y++SLQ Q+E
Sbjct: 113 DNKSNQASTLDQTIQYMKSLQHQLE 137
Score = 40 (19.1 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 187 APESNSLLNTDKNVEVELQKDPSGDSSG 214
APE + N + KD + D SG
Sbjct: 34 APEKKQMDNMPAVASPTMNKDEASDDSG 61
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 160 (61.4 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 34/93 (36%), Positives = 60/93 (64%)
Query: 230 TGANMRGKQAAKPTKDSSLSGEAPKEYIHMRA-KRGQATNSHSLAERVRREKISERMRLL 288
T ++ ++ K +++++ + +E + KR +A H L+ER RR+KI+E M+ L
Sbjct: 241 TETDITDERKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKAL 300
Query: 289 QELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
QEL+P C K T ++ MLD++I YV+SLQ Q+++
Sbjct: 301 QELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQM 332
>UNIPROTKB|Q69WX7 [details] [associations]
symbol:P0417G12.19 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 GO:GO:0005634 Gene3D:4.10.280.10
EMBL:AP003626 EMBL:AP003711 EMBL:AK070970
EnsemblPlants:LOC_Os06g41060.1 OMA:KNGMDLE Uniprot:Q69WX7
Length = 154
Score = 138 (53.6 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 26/36 (72%), Positives = 34/36 (94%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
M LL+ELVPGC+K++G A++LDEIIN+VQSLQ+QVE
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 36
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 146 (56.5 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 30/62 (48%), Positives = 45/62 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +ISE++R LQ LVP +K T + MLD +++++ LQ Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 319 VE 320
++
Sbjct: 194 LQ 195
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 151 (58.2 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+E+ RR KI+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 321 V 321
+
Sbjct: 158 M 158
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 150 (57.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 247 SLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLD 306
S E P R KR +A H+L+E+ RR +I+E+M+ LQ L+P +K T KA MLD
Sbjct: 14 SSESEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLD 72
Query: 307 EIINYVQSLQQQVEV 321
+ I Y++ LQ QV++
Sbjct: 73 DAIEYLKQLQLQVQM 87
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 147 (56.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 34/82 (41%), Positives = 54/82 (65%)
Query: 244 KDSSLSGEAPKEYIHM----RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 299
+DSS + P + +++ RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+
Sbjct: 247 EDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD 306
Query: 300 GKAVMLDEIINYVQSLQQQVEV 321
+ ML+E ++YV+ LQ Q+++
Sbjct: 307 -ISTMLEEAVHYVKFLQLQIKL 327
Score = 42 (19.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 160 VSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQK------DPSGDSS 213
V ++++D + ++ I V T K+ + + + +TDKN + K + SGD++
Sbjct: 144 VVENHDDEESLLQSEISVTTT-KSLTGSKKRSRATSTDKNKRARVNKRAQKNVEMSGDNN 202
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 142 (55.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
KR H+L+E+ RR KI+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 90 KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 322 CYFM 325
M
Sbjct: 149 LAVM 152
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 150 (57.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 36/86 (41%), Positives = 53/86 (61%)
Query: 236 GKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGC 295
G +A SS SG + + +KR +A H+L+E+ RR +I+E+M+ LQ L+P
Sbjct: 172 GGEAVVDEAPSSKSGPSSRS----SSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNS 227
Query: 296 NKITGKAVMLDEIINYVQSLQQQVEV 321
NK T KA MLDE I Y++ LQ QV++
Sbjct: 228 NK-TDKASMLDEAIEYLKQLQLQVQM 252
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
KR +A H+ +ER RR+KI++RM+ LQ+LVP +K T KA MLDE+I Y++ LQ QV +
Sbjct: 210 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVSM 268
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 138 (53.6 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 27/65 (41%), Positives = 44/65 (67%)
Query: 260 RAKRGQA-TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+A+R +H L E+ RR +I+E+ ++LQ LVPGC+K + + LD I+Y++SLQQQ
Sbjct: 146 KARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKCSQSST-LDRTIHYMKSLQQQ 204
Query: 319 VEVCY 323
++ Y
Sbjct: 205 LQAMY 209
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 136 (52.9 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 30/55 (54%), Positives = 42/55 (76%)
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+T+ S+A R+RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+
Sbjct: 158 STDPQSVAARMRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQ 211
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 137 (53.3 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 319 VE 320
++
Sbjct: 343 LQ 344
Score = 41 (19.5 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 32/125 (25%), Positives = 51/125 (40%)
Query: 89 QGMSSTSNLDQYSSDPSFVELVP--KIPG-FGSGNFSEMVSSFGLPENAQIASSGCPPNY 145
Q SSTS+ Q SS P L+ PG F + E++ G NA+ +G P+
Sbjct: 3 QSSSSTSSSSQRSSLPGGGGLIRYGSAPGSFLNSVVDEVIG--GGSSNAR-DFTGYQPSS 59
Query: 146 VPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQ 205
N G + + + S D C GV + +K+ +N N + N ++ L
Sbjct: 60 -DNFIGNFFTGAADSSSLRSDSTTC-----GVNNSSDGQKQLGNNN---NNNSNKDIFLD 110
Query: 206 KDPSG 210
+ G
Sbjct: 111 RSYGG 115
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 137 (53.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 237 KQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCN 296
++ +KP K +S S +P + Q S A +VRRE+ISER+++LQ+LVP
Sbjct: 179 RKGSKPNKAASASSPSPSPSPSPSPNKEQP---QSAAAKVRRERISERLKVLQDLVPNGT 235
Query: 297 KITGKAVMLDEIINYVQSLQQQVEV 321
K+ ML++ INYV+ LQ QV+V
Sbjct: 236 KVD-LVTMLEKAINYVKFLQLQVKV 259
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 243 TKDSSLSGEAPKEYIHMRA-----KRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 297
+ +S + K +H R KR ++T H L ER RR++ +++MR LQ+L+P C K
Sbjct: 202 SNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK 261
Query: 298 ITGKAVMLDEIINYVQSLQQQVEV 321
KA +LDE I Y+++LQ QV++
Sbjct: 262 -DDKASLLDEAIKYMRTLQLQVQM 284
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 134 (52.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 43/143 (30%), Positives = 67/143 (46%)
Query: 179 TNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILXXXXXXXXXXXXNTGANMRGKQ 238
T+ RK N L T+ N +V Q+ + N + G+
Sbjct: 93 TSSLKRKLLDVEN-LCKTNSNCDVTRQELAKSKKKQRVSSESNTVDESNTNW---VDGQS 148
Query: 239 AAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
+ + D S + K RA +G AT+ SL R RREKI+ER++ LQ LVP K+
Sbjct: 149 LSNSSDDEKASVTSVKG--KTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV 206
Query: 299 TGKAVMLDEIINYVQSLQQQVEV 321
+ ML+E ++YV+ LQ Q+++
Sbjct: 207 D-ISTMLEEAVHYVKFLQLQIKL 228
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 38/113 (33%), Positives = 55/113 (48%)
Query: 209 SGDSSGILXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATN 268
SGDS ++ +G+ R + P + S L EY + +R
Sbjct: 148 SGDSGMVMVTTTTPRSAAA--SGSQRRARPPPSPLQGSELH-----EY--SKKQRANNKE 198
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
+ S A + RRE+ISER+R LQELVP K+ MLD I+YV+ +Q Q+ V
Sbjct: 199 TQSSAAKSRRERISERLRALQELVPSGGKVD-MVTMLDRAISYVKFMQMQLRV 250
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 131 (51.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
S+A R+RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+
Sbjct: 153 SVAARLRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKSQVQ 201
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 132 (51.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER++ LQ LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 275
Query: 320 EV 321
++
Sbjct: 276 KL 277
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 128 (50.1 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L++QV+
Sbjct: 131 SVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKKQVQ 179
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 128 (50.1 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L++QV+
Sbjct: 134 SVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKKQVQ 182
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 130 (50.8 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 36/90 (40%), Positives = 50/90 (55%)
Query: 232 ANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQEL 291
A+ QA P+K +G K A + SLA + RRE+ISER+R+LQEL
Sbjct: 172 AHAESSQAMSPSKKQCGAGR--KAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQEL 229
Query: 292 VPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
VP K+ ML++ I+YV+ LQ QV+V
Sbjct: 230 VPNGTKVD-LVTMLEKAISYVKFLQLQVKV 258
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 132 (51.5 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 232 ANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQ-ATNSHSLAERVRREKISERMRLLQE 290
A MR P S S P R K + +++ ++A R+RRE++SER+R+LQ
Sbjct: 269 APMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVAARLRRERVSERLRVLQR 328
Query: 291 LVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
LVPG +K+ A MLDE +Y++ L+ Q+E
Sbjct: 329 LVPGGSKMD-TATMLDEAASYLKFLKSQLE 357
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I YV+ L++Q+ +
Sbjct: 131 SVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRL 180
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFM 325
+T+ ++A R RRE+ISE++R+LQ LVPG K+ A MLDE NY++ L+ QV+ +
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMD-TASMLDEAANYLKFLRAQVKALENL 334
Query: 326 AVKWRHFNLQFT 337
K NL F+
Sbjct: 335 RPKLDQTNLSFS 346
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 121 (47.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 24/45 (53%), Positives = 37/45 (82%)
Query: 277 RREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
RR++I+++M+ LQ+LVP +K T KA MLDE+I+Y++ LQ QV+V
Sbjct: 13 RRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQVQV 56
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 119 (46.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/54 (40%), Positives = 39/54 (72%)
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
T +H++ E+ RREK++ER L++++P NKI K +LD+ I Y+Q L+++V+
Sbjct: 439 TGNHAVLEKKRREKLNERFMTLRKIIPSINKID-KVSILDDTIEYLQELERRVQ 491
Score = 56 (24.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 155 RNSRNVSQSYEDHQICEEAAIGVATNGKTRKRA 187
R S +S+ YE + E ++ GVA + +RA
Sbjct: 73 RRSEQLSELYESLSVAESSSSGVAAGSQVTRRA 105
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 240 AKPTK---DSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCN 296
A+P K D+ ++ + K ++ H LAER RREK+S+R L ++VPG
Sbjct: 149 ARPVKRSYDAMVAADVAKAPAAAASRPASQNQEHILAERKRREKLSQRFIALSKIVPGLK 208
Query: 297 KITGKAVMLDEIINYVQSLQQQVE 320
K+ KA +L + I YV+ LQ QV+
Sbjct: 209 KMD-KASVLGDAIKYVKQLQDQVK 231
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 27/67 (40%), Positives = 48/67 (71%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
+RG+A H+ +ER RR++I++RMR LQ+L+P +K K +LD++I +++ LQ QV+
Sbjct: 163 RRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASK-ADKVSILDDVIEHLKQLQAQVQ- 220
Query: 322 CYFMAVK 328
FM+++
Sbjct: 221 --FMSLR 225
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 124 (48.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R AT + SL R RRE+I+ R+R+LQ+LVP K+ + ML+E ++YV+ LQ Q++
Sbjct: 212 ARRRSATIAQSLYARRRRERINGRLRILQKLVPNGTKVD-ISTMLEEAVHYVKFLQLQIK 270
Query: 321 V 321
V
Sbjct: 271 V 271
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 125 (49.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 25/55 (45%), Positives = 43/55 (78%)
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+++ ++A R+RRE++S+R+R+LQ+LVPG NK+ A MLDE +Y++ L+ QV+
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMD-TASMLDEAASYLKFLKSQVQ 335
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 119 (46.9 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
+A RG A++ SL R RRE+I++R++ LQ LVP K+ + ML++ ++YV+ LQ Q+
Sbjct: 133 KANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVD-ISTMLEDAVHYVKFLQLQI 191
Query: 320 EV 321
++
Sbjct: 192 KL 193
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 120 (47.3 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 36/97 (37%), Positives = 56/97 (57%)
Query: 229 NTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNS----HSLAERVRREKISER 284
+T + G + +++ LS + P + + K +AT S SLA + RRE+ISER
Sbjct: 169 STSPKLAGNKRPFTGENTQLS-KKPSSGTNGKIKP-KATTSPKDPQSLAAKNRRERISER 226
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
+++LQELVP K+ ML++ I YV+ LQ QV+V
Sbjct: 227 LKVLQELVPNGTKVD-LVTMLEKAIGYVKFLQVQVKV 262
Score = 40 (19.1 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 28/88 (31%), Positives = 33/88 (37%)
Query: 50 FYGSGWEPIVSLNQGESFGVSSMVSH-NEFAPSYPVALENQGMSSTSNLDQYSSDPSFVE 108
FY SG E I N F SS + N + PV N+ YS D
Sbjct: 55 FYPSG-ETIEDHNSLMDFNASSFFTFDNHRSLISPVTNGGAFPVVDGNMS-YSYDGWSHH 112
Query: 109 LVPKI-PG-FGSGNFSEMVSSFGLPENA 134
V I P + N E SSFGL N+
Sbjct: 113 QVDSISPRVIKTPNSFETTSSFGLTSNS 140
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 120 (47.3 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
SLA + RRE+ISER+++LQELVP K+ ML++ I+YV+ LQ QV+V
Sbjct: 207 SLAAKNRRERISERLKILQELVPNGTKVD-LVTMLEKAISYVKFLQVQVKV 256
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 33/92 (35%), Positives = 53/92 (57%)
Query: 233 NMRGKQAAKPTKDSSLSGEAP-KEYIHMRAKRGQ--ATNSHSLAERVRREKISERMRLLQ 289
N + DS S E+P + +A+ G AT+ SL R RRE+I+ER+++LQ
Sbjct: 192 NRQSLSCCTSENDSIGSQESPVAAKSNGKAQSGHRSATDPQSLYARKRRERINERLKILQ 251
Query: 290 ELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
LVP K+ + ML+E ++YV+ LQ Q+++
Sbjct: 252 NLVPNGTKVD-ISTMLEEAMHYVKFLQLQIKL 282
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 239 AAKP-TKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 297
A +P T + +GE P+ ++R +++ ++A R RRE+ISER+R+LQ+LVPG K
Sbjct: 348 AMRPVTLGAEDAGERPRRR-NVRI----SSDPQTVAARQRRERISERLRVLQKLVPGGAK 402
Query: 298 ITGKAVMLDEIINYVQSLQQQV 319
+ A MLDE NY++ L+ Q+
Sbjct: 403 MD-TASMLDEAANYLRFLKSQI 423
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 243 TKDSSLSGEAPKEYIHMRAKRGQATNS---HSLAERVRREKISERMRLLQELVPGCNKIT 299
T+ + +E R +R A S S+A R+RRE++S+RMR LQ LVPG ++
Sbjct: 95 TRQGVIDAAEEEEAAAPRPRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPGGARLD 154
Query: 300 GKAVMLDEIINYVQSLQQQVE 320
A ML+E I YV+ L+ V+
Sbjct: 155 -TASMLEEAIRYVKFLKGHVQ 174
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 23/56 (41%), Positives = 40/56 (71%)
Query: 265 QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+ T +H+L+E+ RREK++ER L+ ++P +KI K +LD+ I Y+Q LQ++V+
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKID-KVSILDDTIEYLQDLQKRVQ 455
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 114 (45.2 bits), Expect = 0.00029, P = 0.00029
Identities = 25/68 (36%), Positives = 45/68 (66%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
K+ + R + + ++ SL + RRE+I+ER+R+LQ+LVP K+ + ML+E + YV+
Sbjct: 150 KQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVD-ISTMLEEAVQYVK 208
Query: 314 SLQQQVEV 321
LQ Q+++
Sbjct: 209 FLQLQIKL 216
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 116 (45.9 bits), Expect = 0.00030, P = 0.00030
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
K + HS+ E+ RR KI+ER ++L+EL+P + A L E+I+YVQ LQ++V+
Sbjct: 42 KASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ 100
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 115 (45.5 bits), Expect = 0.00041, P = 0.00041
Identities = 33/128 (25%), Positives = 55/128 (42%)
Query: 194 LNTDKNVEVELQKDPSGDSSGILXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSLSGEAP 253
+ T+ N+ S SSG T + G
Sbjct: 56 MKTNNNMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSLNFSNQVSMDQKVGSKR 115
Query: 254 KEYIHMRAKRG-QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
K+ ++ +R H LAER RR+K++ER+ L L+PG K T KA +L++ I ++
Sbjct: 116 KDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKK-TDKATVLEDAIKHL 174
Query: 313 QSLQQQVE 320
+ LQ++V+
Sbjct: 175 KQLQERVK 182
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 109 (43.4 bits), Expect = 0.00042, P = 0.00042
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 245 DSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG-CNKITGKAV 303
D E P E + AKR ++ + E+ RR++I +++ +LQ L+P C K A
Sbjct: 47 DHEKHDEEPDEESYRMAKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTK-PDLAS 105
Query: 304 MLDEIINYVQSLQQQVEV 321
L+ II Y++SL+ QV+V
Sbjct: 106 KLENIIEYIKSLKYQVDV 123
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 112 (44.5 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
M AK A+ SHS AER RRE+I+ + L+ ++P K T KA +L E+I +V+ L+++
Sbjct: 167 MDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTK-TDKASLLAEVIQHVKELKRE 225
Query: 319 VEV 321
V
Sbjct: 226 TSV 228
Score = 43 (20.2 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 17/68 (25%), Positives = 28/68 (41%)
Query: 1 MGAGDNDDMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVS 60
+GA N GF ++ +++ + P + P S P FYGS + +
Sbjct: 51 LGASGNVGSGFTIFSQDSVSPIWSLPPPTSIQPPFDQFP--PPSSSPASFYGSFFNRSRA 108
Query: 61 LNQGESFG 68
+QG FG
Sbjct: 109 HHQGLQFG 116
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 261 AKRGQAT--NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
A +G +T + HS E+ RR KI++R+ +L+EL+P ++ KA L E+I Y++ LQ++
Sbjct: 139 ADQGPSTPRSKHSATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQEK 198
Query: 319 VE 320
V+
Sbjct: 199 VQ 200
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 114 (45.2 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 277 RREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
RR KI+ER R LQ LVPGC+K + +A LD+ I Y++SLQ Q++
Sbjct: 226 RRFKITERFRTLQRLVPGCDK-SNQASTLDQTIQYMKSLQHQLK 268
Score = 40 (19.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 29/159 (18%), Positives = 56/159 (35%)
Query: 90 GMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNK 149
G S+ DQ S+ L P P G+ + + + ++ A++ PP+
Sbjct: 62 GGGGASSFDQPPPPVSYHRLSPPPPAMGTTTTTLLPEQPLVDDHHLPAAAAAPPSEEEMA 121
Query: 150 EGCYERNSRN--VSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKD 207
Y S + + + ++ A K ++ P + S T + KD
Sbjct: 122 AWLYPIVSGHEVAGGGWRSPEAQDDRRAAPAPEKKQMEKMPAAASPTTT-------MNKD 174
Query: 208 PSGDSSGILXXXXXXXXXXXXNTGANMRGKQAAKPTKDS 246
+ D SG A+ RG ++++P + S
Sbjct: 175 ETSDDSGERKKKKASSAAGKSKQ-ASPRGCRSSQPYRKS 212
>TAIR|locus:2090679 [details] [associations]
symbol:AT3G19500 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB025624 EMBL:AY084520 EMBL:AF488631 IPI:IPI00518921
RefSeq:NP_566639.1 UniGene:At.38400 ProteinModelPortal:Q9LT67
SMR:Q9LT67 EnsemblPlants:AT3G19500.1 GeneID:821484
KEGG:ath:AT3G19500 TAIR:At3g19500 eggNOG:NOG294378
HOGENOM:HOG000240890 OMA:HVENSNG PhylomeDB:Q9LT67
ProtClustDB:CLSN2688564 Genevestigator:Q9LT67 Uniprot:Q9LT67
Length = 270
Score = 111 (44.1 bits), Expect = 0.00081, P = 0.00081
Identities = 50/177 (28%), Positives = 81/177 (45%)
Query: 157 SRNVSQSYEDHQ----ICE--EAAIGVATNGKTRKRAP-ESNSLLNTDKNVEVELQKDPS 209
S V S DHQ + + E ++G +GKT R S N D+++ +E PS
Sbjct: 29 SDGVLSSSSDHQPEGNVGDGGEDSLGFVFSGKTGSRMLCFSGGYQNDDESLFLE----PS 84
Query: 210 GDSSGILXXXXXXXXXXXXNTG-ANMRGKQAAKPTKDSSLSGEAPKEYIHMR----AKRG 264
+SG+ N+ A K TK + +G + + + KR
Sbjct: 85 VPTSGVSDLDPSCIKIDCRNSNDACTVDKSTKSSTKKRTGTGNGQESDQNRKPGKKGKRN 144
Query: 265 QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
Q +S +A +VR+E++ ER+ LQ+LV K T A +L E + Y++ LQ Q++V
Sbjct: 145 QEKSSVGIA-KVRKERLGERIAALQQLVSPYGK-TDAASVLHEAMGYIKFLQDQIQV 199
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 107 (42.7 bits), Expect = 0.00097, P = 0.00097
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEV 321
A +S S + RR++I+ER+R+LQEL+P K+ + ML+E I YV+ L Q+++
Sbjct: 115 AESSQSYYAKNRRQRINERLRILQELIPNGTKVD-ISTMLEEAIQYVKFLHLQIKL 169
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 342 330 0.00089 116 3 11 23 0.46 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 100
No. of states in DFA: 609 (65 KB)
Total size of DFA: 229 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.31u 0.13s 30.44t Elapsed: 00:00:01
Total cpu time: 30.31u 0.13s 30.44t Elapsed: 00:00:01
Start: Sat May 11 10:38:01 2013 End: Sat May 11 10:38:02 2013