Your job contains 1 sequence.
>019339
MSDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRL
LKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAN
DGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSL
PLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGS
PEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLE
GAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019339
(342 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2130654 - symbol:FPS2 "farnesyl diphosphate sy... 1476 2.9e-151 1
TAIR|locus:2160947 - symbol:FPS1 "farnesyl diphosphate sy... 1457 3.0e-149 1
SGD|S000003703 - symbol:ERG20 "Farnesyl pyrophosphate syn... 878 6.7e-88 1
CGD|CAL0002030 - symbol:ERG20 species:5476 "Candida albic... 859 6.9e-86 1
UNIPROTKB|Q59TD9 - symbol:ERG20 "Likely farnesyl diphosph... 859 6.9e-86 1
DICTYBASE|DDB_G0278735 - symbol:fps "farnesyl diphosphate... 828 1.3e-82 1
ZFIN|ZDB-GENE-050506-78 - symbol:fdps "farnesyl diphospha... 809 1.4e-80 1
UNIPROTKB|P08836 - symbol:FDPS "Farnesyl pyrophosphate sy... 808 1.8e-80 1
RGD|68953 - symbol:Fdps "farnesyl diphosphate synthase" s... 791 1.1e-78 1
MGI|MGI:104888 - symbol:Fdps "farnesyl diphosphate synthe... 785 4.8e-78 1
ASPGD|ASPL0000012297 - symbol:AN8012 species:162425 "Emer... 784 6.2e-78 1
UNIPROTKB|F1N431 - symbol:RUSC1 "Uncharacterized protein"... 780 1.6e-77 1
UNIPROTKB|Q8WMY2 - symbol:FDPS "Farnesyl pyrophosphate sy... 780 1.6e-77 1
UNIPROTKB|G4MLE9 - symbol:MGG_08649 "Farnesyl pyrophospha... 780 1.6e-77 1
POMBASE|SPAC6F12.13c - symbol:fps1 "geranyltranstransfera... 778 2.7e-77 1
UNIPROTKB|D0G6X4 - symbol:FDPS "Uncharacterized protein" ... 775 5.5e-77 1
UNIPROTKB|E9PCI9 - symbol:FDPS "Farnesyl pyrophosphate sy... 771 1.5e-76 1
UNIPROTKB|P14324 - symbol:FDPS "Farnesyl pyrophosphate sy... 771 1.5e-76 1
UNIPROTKB|F1P926 - symbol:FDPS "Uncharacterized protein" ... 760 2.1e-75 1
FB|FBgn0025373 - symbol:Fpps "Farnesyl pyrophosphate synt... 729 4.1e-72 1
DICTYBASE|DDB_G0278823 - symbol:DDB_G0278823 "putative fa... 725 1.1e-71 1
UNIPROTKB|G3MZT9 - symbol:G3MZT9 "Uncharacterized protein... 372 9.8e-66 2
UNIPROTKB|F1LND7 - symbol:Fdps "Farnesyl pyrophosphate sy... 659 1.1e-64 1
POMBASE|SPBC36.06c - symbol:spo9 "farnesyl pyrophosphate ... 592 1.4e-57 1
GENEDB_PFALCIPARUM|PF11_0295 - symbol:PF11_0295 "farnesyl... 327 6.9e-53 2
UNIPROTKB|Q8II79 - symbol:PF11_0295 "Farnesyl pyrophospha... 327 6.9e-53 2
DICTYBASE|DDB_G0268742 - symbol:DDB_G0268742 species:4468... 286 2.0e-51 2
UNIPROTKB|F1N0Q7 - symbol:RUSC1 "Uncharacterized protein"... 521 2.2e-49 1
WB|WBGene00011058 - symbol:fdps-1 species:6239 "Caenorhab... 465 3.9e-44 1
UNIPROTKB|F1M2I4 - symbol:F1M2I4 "Uncharacterized protein... 265 1.7e-27 2
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 135 2.4e-06 1
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 131 5.6e-06 1
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 131 5.6e-06 1
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 130 7.5e-06 1
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 130 7.5e-06 1
UNIPROTKB|O50410 - symbol:idsB "Geranylgeranyl diphosphat... 130 1.1e-05 1
UNIPROTKB|Q3IPL1 - symbol:idsA3 "Geranylfarnesyl diphosph... 127 2.2e-05 1
TIGR_CMR|SO_1526 - symbol:SO_1526 "geranyltranstransferas... 125 2.7e-05 1
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 126 2.7e-05 1
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 121 9.5e-05 1
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 121 9.5e-05 1
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 120 0.00016 1
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 118 0.00022 1
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 118 0.00022 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 118 0.00022 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 117 0.00022 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 117 0.00022 1
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 118 0.00023 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 118 0.00025 1
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 116 0.00029 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 116 0.00029 1
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 116 0.00033 1
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 114 0.00059 1
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 112 0.00081 1
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 112 0.00081 1
>TAIR|locus:2130654 [details] [associations]
symbol:FPS2 "farnesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IGI;ISS;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006084 "acetyl-CoA metabolic process" evidence=RCA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0016132
"brassinosteroid biosynthetic process" evidence=RCA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IGI;IDA]
[GO:0004337 "geranyltranstransferase activity" evidence=IGI;IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006695 EMBL:Z97343
EMBL:AL161545 eggNOG:COG0142 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 HOGENOM:HOG000160912 KO:K00787
ProtClustDB:CLSN2685869 EMBL:L46350 EMBL:L46349 EMBL:AY072207
EMBL:AY117354 IPI:IPI00520567 PIR:S71182 RefSeq:NP_193452.1
UniGene:At.21195 ProteinModelPortal:Q43315 SMR:Q43315 STRING:Q43315
PaxDb:Q43315 PRIDE:Q43315 EnsemblPlants:AT4G17190.1 GeneID:827430
KEGG:ath:AT4G17190 TAIR:At4g17190 InParanoid:Q43315 OMA:VAMQRAN
PhylomeDB:Q43315 BioCyc:ARA:AT4G17190-MONOMER
BioCyc:MetaCyc:AT4G17190-MONOMER Genevestigator:Q43315
Uniprot:Q43315
Length = 342
Score = 1476 (524.6 bits), Expect = 2.9e-151, P = 2.9e-151
Identities = 272/342 (79%), Positives = 307/342 (89%)
Query: 1 MSDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRL 60
M+DLKS F++VY VLK +LL DP+FEF H+SRQW++RMLDYNV GGKLNRGLSVVDSY+L
Sbjct: 1 MADLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKL 60
Query: 61 LKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAN 120
LK+G++LT+ E FLS ALGWCIEWLQAYFLVLDDIMD S TRRGQPCWFR PKVGMIA N
Sbjct: 61 LKQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAIN 120
Query: 121 DGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSL 180
DG+LLRNHI RILK HFR+ PYYVDL+DLFNEVEFQTA GQMIDLITT +GEKDLSKYSL
Sbjct: 121 DGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMIDLITTFDGEKDLSKYSL 180
Query: 181 PLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGS 240
+HRRIV+YKTAYYSFYLPVACALLMAGENL+ H +VK +LV MGIYFQVQDD+LDCF
Sbjct: 181 QIHRRIVEYKTAYYSFYLPVACALLMAGENLENHTDVKTVLVDMGIYFQVQDDYLDCFAD 240
Query: 241 PEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLE 300
PE +GK+GTDIED+KCSWLVVKALE C+EEQ K+++ENYGK +P+ VAKVK LYK LDLE
Sbjct: 241 PETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKAEPSNVAKVKALYKELDLE 300
Query: 301 GAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
GAF+EYEKESYEKLTK IEAH +K +QAVLKSFLAKIYKRQK
Sbjct: 301 GAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFLAKIYKRQK 342
>TAIR|locus:2160947 [details] [associations]
symbol:FPS1 "farnesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006084 "acetyl-CoA metabolic process" evidence=RCA]
[GO:0006598 "polyamine catabolic process" evidence=RCA] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0009698 "phenylpropanoid metabolic process"
evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0042398 "cellular modified amino acid
biosynthetic process" evidence=RCA] [GO:0070838 "divalent metal ion
transport" evidence=RCA] [GO:0004161 "dimethylallyltranstransferase
activity" evidence=IGI;IDA] [GO:0004337 "geranyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 GO:GO:0005829 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006695 EMBL:AB016886
eggNOG:COG0142 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:U80605 EMBL:L46367 EMBL:AF370324 EMBL:AY063112
EMBL:X75789 IPI:IPI00548843 IPI:IPI00760338 PIR:S52009
RefSeq:NP_199588.1 UniGene:At.21206 ProteinModelPortal:Q09152
SMR:Q09152 STRING:Q09152 PaxDb:Q09152 PRIDE:Q09152
EnsemblPlants:AT5G47770.1 GeneID:834828 KEGG:ath:AT5G47770
TAIR:At5g47770 HOGENOM:HOG000160912 InParanoid:Q09152 KO:K00787
OMA:FRRFEQH PhylomeDB:Q09152 ProtClustDB:CLSN2685869
BioCyc:ARA:AT5G47770-MONOMER BioCyc:MetaCyc:AT5G47770-MONOMER
Genevestigator:Q09152 GermOnline:AT5G47770 Uniprot:Q09152
Length = 384
Score = 1457 (517.9 bits), Expect = 3.0e-149, P = 3.0e-149
Identities = 267/341 (78%), Positives = 305/341 (89%)
Query: 2 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL 61
+DLKS F+ VY VLK +LL+DP+FEF ++SR WVDRMLDYNV GGKLNRGLSVVDS++LL
Sbjct: 44 TDLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFKLL 103
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
K+G +LT+ E FLS ALGWCIEWLQAYFLVLDDIMD S TRRGQPCWFRVP+VGM+A ND
Sbjct: 104 KQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAIND 163
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
G+LLRNHI RILK HFRDKPYYVDL+DLFNEVE QTA GQMIDLITT EGEKDL+KYSL
Sbjct: 164 GILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMIDLITTFEGEKDLAKYSLS 223
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSP 241
+HRRIVQYKTAYYSFYLPVACALLMAGENL+ H++VK++LV MGIYFQVQDD+LDCF P
Sbjct: 224 IHRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADP 283
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
E +GK+GTDIED+KCSWLVVKALE C+EEQ K+++ENYGK DP+ VAKVK+LYK LDLEG
Sbjct: 284 ETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKPDPSNVAKVKDLYKELDLEG 343
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F+EYE +SYEKLT +IE H +K +QAVLKSFLAKIYKRQK
Sbjct: 344 VFMEYESKSYEKLTGAIEGHQSKAIQAVLKSFLAKIYKRQK 384
>SGD|S000003703 [details] [associations]
symbol:ERG20 "Farnesyl pyrophosphate synthetase" species:4932
"Saccharomyces cerevisiae" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;IDA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA;IDA]
[GO:0004337 "geranyltranstransferase activity" evidence=IEA;IDA]
[GO:0006696 "ergosterol biosynthetic process" evidence=TAS]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
SGD:S000003703 GO:GO:0005783 EMBL:BK006943 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
HOGENOM:HOG000160912 KO:K00787 OMA:VAMQRAN
GeneTree:ENSGT00530000064127 OrthoDB:EOG4SFDFW EMBL:J05091
EMBL:Z49442 EMBL:X05550 PIR:A34441 RefSeq:NP_012368.1
ProteinModelPortal:P08524 SMR:P08524 DIP:DIP-1163N IntAct:P08524
MINT:MINT-555012 STRING:P08524 PaxDb:P08524 PeptideAtlas:P08524
PRIDE:P08524 EnsemblFungi:YJL167W GeneID:853272 KEGG:sce:YJL167W
CYGD:YJL167w BioCyc:MetaCyc:MONOMER-655 NextBio:973547
Genevestigator:P08524 GermOnline:YJL167W Uniprot:P08524
Length = 352
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 174/344 (50%), Positives = 241/344 (70%)
Query: 5 KSRFIEVYGVLKQEL-LNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL-- 61
+ RF+ V+ L +EL + A+ ++ W L+YN PGGKLNRGLSVVD+Y +L
Sbjct: 9 RERFLNVFPKLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSN 68
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
K ++L +E+ + LGWCIE LQAYFLV DD+MD S TRRGQPCW++VP+VG IA ND
Sbjct: 69 KTVEQLGQEEYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAIND 128
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
+L I ++LK+HFR++ YY+D+ +LF+EV FQT GQ++DLIT E + DLSK+SL
Sbjct: 129 AFMLEAAIYKLLKSHFRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLK 188
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV-EVKDILVQMGIYFQVQDDFLDCFGS 240
H IV +KTAYYSFYLPVA A+ +AG +K + + +D+L+ +G YFQ+QDD+LDCFG+
Sbjct: 189 KHSFIVTFKTAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDCFGT 248
Query: 241 PEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLE 300
PE IGK+GTDI+D KCSW++ KALEL + EQ+K + ENYGK D AK K+++ L +E
Sbjct: 249 PEQIGKIGTDIQDNKCSWVINKALELASAEQRKTLDENYGKKDSVAEAKCKKIFNDLKIE 308
Query: 301 GAFVEYEKESYEKLTKSI-EAHPTKEVQA-VLKSFLAKIYKRQK 342
+ EYE+ + L I + ++ +A VL +FL K+YKR K
Sbjct: 309 QLYHEYEESIAKDLKAKISQVDESRGFKADVLTAFLNKVYKRSK 352
>CGD|CAL0002030 [details] [associations]
symbol:ERG20 species:5476 "Candida albicans" [GO:0004161
"dimethylallyltranstransferase activity" evidence=ISS] [GO:0006696
"ergosterol biosynthetic process" evidence=ISS] [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 CGD:CAL0002030 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0006696 eggNOG:COG0142
GO:GO:0008299 GO:GO:0004161 GO:GO:0004337 KO:K00787
EMBL:AACQ01000142 EMBL:AACQ01000141 RefSeq:XP_712885.1
RefSeq:XP_712917.1 ProteinModelPortal:Q59TD9 STRING:Q59TD9
GeneID:3645440 GeneID:3645472 KEGG:cal:CaO19.11967
KEGG:cal:CaO19.4491 Uniprot:Q59TD9
Length = 351
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 177/351 (50%), Positives = 237/351 (67%)
Query: 1 MSD---LKSRFIEVYGVLKQELLND-PAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVD 56
MSD + RF++V+ L +EL ++ ++ +W R L+YN PGGKLNRGLSVVD
Sbjct: 1 MSDKLAARERFLDVFEDLVEELKQILVSYNMPQEAIEWFVRSLNYNTPGGKLNRGLSVVD 60
Query: 57 SYRLLKE--GKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKV 114
++ +L +L D E+ + LGW IE LQAYFLV DD+MD S TRRGQPCW+ V V
Sbjct: 61 TFAILNNTTSDKLNDTEYKKVALLGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLVEGV 120
Query: 115 GMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKD 174
IA ND +L I +LK HFR PYYVDLLDLF+EV FQT GQ++DLIT E D
Sbjct: 121 NNIAINDSFMLEGAIYILLKKHFRQDPYYVDLLDLFHEVTFQTELGQLLDLITADEEIVD 180
Query: 175 LSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV-EVKDILVQMGIYFQVQDD 233
L K+SL H IV +KTAYYSFYLPVA A+ M+G N +K + +V+DIL+ +G YFQ+QDD
Sbjct: 181 LDKFSLEKHSFIVIFKTAYYSFYLPVALAMYMSGINDEKDLKQVRDILIPLGEYFQIQDD 240
Query: 234 FLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKEL 293
+LDCFG+PE IGK+GTDI+D KCSW++ +AL + EQ++L+ +NYGK D K K+L
Sbjct: 241 YLDCFGTPEQIGKIGTDIKDNKCSWVINQALLIATPEQRQLLDDNYGKKDDESEQKCKDL 300
Query: 294 YKTLDLEGAFVEYEKESYEKLTKSIEA-HPTKEVQA-VLKSFLAKIYKRQK 342
+K L +E + +YE+ KL K I+ ++ ++ VL +FL K+YKR K
Sbjct: 301 FKQLGIEKIYHDYEESIVAKLRKQIDQIDESRGLKKDVLTAFLGKVYKRSK 351
>UNIPROTKB|Q59TD9 [details] [associations]
symbol:ERG20 "Likely farnesyl diphosphate synthetase"
species:237561 "Candida albicans SC5314" [GO:0004161
"dimethylallyltranstransferase activity" evidence=ISS] [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0006696
"ergosterol biosynthetic process" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0002030
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0006696
eggNOG:COG0142 GO:GO:0008299 GO:GO:0004161 GO:GO:0004337 KO:K00787
EMBL:AACQ01000142 EMBL:AACQ01000141 RefSeq:XP_712885.1
RefSeq:XP_712917.1 ProteinModelPortal:Q59TD9 STRING:Q59TD9
GeneID:3645440 GeneID:3645472 KEGG:cal:CaO19.11967
KEGG:cal:CaO19.4491 Uniprot:Q59TD9
Length = 351
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 177/351 (50%), Positives = 237/351 (67%)
Query: 1 MSD---LKSRFIEVYGVLKQELLND-PAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVD 56
MSD + RF++V+ L +EL ++ ++ +W R L+YN PGGKLNRGLSVVD
Sbjct: 1 MSDKLAARERFLDVFEDLVEELKQILVSYNMPQEAIEWFVRSLNYNTPGGKLNRGLSVVD 60
Query: 57 SYRLLKE--GKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKV 114
++ +L +L D E+ + LGW IE LQAYFLV DD+MD S TRRGQPCW+ V V
Sbjct: 61 TFAILNNTTSDKLNDTEYKKVALLGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLVEGV 120
Query: 115 GMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKD 174
IA ND +L I +LK HFR PYYVDLLDLF+EV FQT GQ++DLIT E D
Sbjct: 121 NNIAINDSFMLEGAIYILLKKHFRQDPYYVDLLDLFHEVTFQTELGQLLDLITADEEIVD 180
Query: 175 LSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV-EVKDILVQMGIYFQVQDD 233
L K+SL H IV +KTAYYSFYLPVA A+ M+G N +K + +V+DIL+ +G YFQ+QDD
Sbjct: 181 LDKFSLEKHSFIVIFKTAYYSFYLPVALAMYMSGINDEKDLKQVRDILIPLGEYFQIQDD 240
Query: 234 FLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKEL 293
+LDCFG+PE IGK+GTDI+D KCSW++ +AL + EQ++L+ +NYGK D K K+L
Sbjct: 241 YLDCFGTPEQIGKIGTDIKDNKCSWVINQALLIATPEQRQLLDDNYGKKDDESEQKCKDL 300
Query: 294 YKTLDLEGAFVEYEKESYEKLTKSIEA-HPTKEVQA-VLKSFLAKIYKRQK 342
+K L +E + +YE+ KL K I+ ++ ++ VL +FL K+YKR K
Sbjct: 301 FKQLGIEKIYHDYEESIVAKLRKQIDQIDESRGLKKDVLTAFLGKVYKRSK 351
>DICTYBASE|DDB_G0278735 [details] [associations]
symbol:fps "farnesyl diphosphate synthase"
species:44689 "Dictyostelium discoideum" [GO:0042493 "response to
drug" evidence=IDA;IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IEA;ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0004337 "geranyltranstransferase activity"
evidence=IEA;ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0008203
"cholesterol metabolic process" evidence=IEA] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
[GO:0005777 "peroxisome" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 dictyBase:DDB_G0278735 GO:GO:0005829
GO:GO:0042493 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0006695
EMBL:AAFI02000024 eggNOG:COG0142 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 KO:K00787 OMA:VAMQRAN EMBL:AF234168
RefSeq:XP_641990.1 HSSP:P08836 ProteinModelPortal:Q9NH03
STRING:Q9NH03 EnsemblProtists:DDB0215017 GeneID:8621722
KEGG:ddi:DDB_G0278735 InParanoid:Q9NH03 ProtClustDB:CLSZ2430738
Uniprot:Q9NH03
Length = 382
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 164/342 (47%), Positives = 231/342 (67%)
Query: 8 FIEVYGVLKQELLND-PAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKE 66
F+E++ +L E+L + P + + WV++M++ NV GGK+NRGL+V+ S +LL EG++
Sbjct: 41 FVEIFPILTNEILKELPGMDMPPQTIAWVEKMINVNVSGGKMNRGLTVLHSLQLLVEGRQ 100
Query: 67 LTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPK-------VGMIAA 119
L+ E FL++ LGWC+EWLQA+FLV DDIMD S TRRGQPCW+R +G IA
Sbjct: 101 LSRSEIFLANVLGWCVEWLQAFFLVADDIMDQSITRRGQPCWYRQANPISNNGTIGSIAI 160
Query: 120 NDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYS 179
ND +L + I ++K +FR++PYY D+LD+F+E +QT GQ++DL TT D S ++
Sbjct: 161 NDSFILESCIYILIKKYFRNEPYYADILDIFHETSYQTELGQLLDL-TTQPNRGDFSLFT 219
Query: 180 LPLHRRIVQYKTAYYSFYLPVACALLMAG-ENLDKHVEVKDILVQMGIYFQVQDDFLDCF 238
L +RRIV+YKTAYYSFYLPVA A+LMAG + KDIL+ MG +FQVQDDFLDC+
Sbjct: 220 LNTYRRIVKYKTAYYSFYLPVALAMLMAGITSTPAFSTAKDILLPMGEFFQVQDDFLDCY 279
Query: 239 GSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLD 298
GSP VIGK+G DIE+ KCSW++ +A+ EQ L+ ++YG +P V VK++Y +
Sbjct: 280 GSPAVIGKIGRDIEENKCSWMICQAILNGTPEQINLLKKHYGLDNPTDVELVKKIYGEIG 339
Query: 299 LEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKR 340
L+ F +YE ESY L I++ + +K L+KIYKR
Sbjct: 340 LKKIFKDYEDESYAFLISKIKSVRIMPQEVFIK-LLSKIYKR 380
>ZFIN|ZDB-GENE-050506-78 [details] [associations]
symbol:fdps "farnesyl diphosphate synthase (farnesyl
pyrophosphate synthetase, dimethylallyltranstransferase,
geranyltranstransferase)" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
ZFIN:ZDB-GENE-050506-78 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299 HOGENOM:HOG000160912
HOVERGEN:HBG005741 EMBL:BC083515 IPI:IPI00735002 UniGene:Dr.77233
ProteinModelPortal:Q5XJ03 STRING:Q5XJ03 PRIDE:Q5XJ03
InParanoid:Q5XJ03 ArrayExpress:Q5XJ03 Bgee:Q5XJ03 Uniprot:Q5XJ03
Length = 359
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 165/346 (47%), Positives = 221/346 (63%)
Query: 1 MSD---LKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDS 57
MSD + F ++ L ++ DP D+ + +L YN PGGK NRGLSV+ S
Sbjct: 17 MSDPQLFDAEFEKLVCELTEQDFTDPVLS---DALNRLREVLQYNAPGGKRNRGLSVIGS 73
Query: 58 YRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMI 117
R L EL +E + +GWCIE LQA+FLV DDIMD S TRRGQPCW++ +G+
Sbjct: 74 LRELVSPSELPTEEVHRALLVGWCIELLQAFFLVADDIMDSSVTRRGQPCWYKKEAIGLD 133
Query: 118 AANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSK 177
A ND LL I R+L+ H R +PYYV LL+LF E FQT GQ +DL+T + DL++
Sbjct: 134 AINDAFLLEGSIYRLLRRHCRGQPYYVHLLELFTETSFQTELGQALDLMTAPPHKIDLNR 193
Query: 178 YSLPLHRRIVQYKTAYYSFYLPVACALLMAG-ENLDKHVEVKDILVQMGIYFQVQDDFLD 236
+++ ++ IV+YKTA+YSFYLPVA A+ MAG EN +H K IL++MG +FQ+QDD+LD
Sbjct: 194 FTMERYKAIVKYKTAFYSFYLPVAAAMYMAGIENEIEHHNAKTILLEMGEFFQIQDDYLD 253
Query: 237 CFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKT 296
CFG P V GK+GTDI+D KCSWLVV AL + EQ+ + YG+ D V +VK LY T
Sbjct: 254 CFGDPAVTGKIGTDIQDNKCSWLVVTALGIMTPEQRAELEACYGRSDAESVERVKALYDT 313
Query: 297 LDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
L++ + ++E+ESY +L K I+ H AV +F KIYKR K
Sbjct: 314 LEMPMRYHQHEEESYHRLQKLIQLHAKNLPHAVFLNFAKKIYKRNK 359
>UNIPROTKB|P08836 [details] [associations]
symbol:FDPS "Farnesyl pyrophosphate synthase" species:9031
"Gallus gallus" [GO:0006695 "cholesterol biosynthetic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0004161 "dimethylallyltranstransferase activity" evidence=IEA]
[GO:0004337 "geranyltranstransferase activity" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006695 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 HOVERGEN:HBG005741 IPI:IPI00584175 PDB:1FPS PDB:1UBV
PDB:1UBW PDB:1UBX PDB:1UBY PDBsum:1FPS PDBsum:1UBV PDBsum:1UBW
PDBsum:1UBX PDBsum:1UBY ProteinModelPortal:P08836 SMR:P08836
EvolutionaryTrace:P08836 Uniprot:P08836
Length = 367
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 155/306 (50%), Positives = 210/306 (68%)
Query: 38 MLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMD 97
+L YN PGGK NRGL+VV +YR L + + + A+GWCIE QA+FLV DDIMD
Sbjct: 62 VLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELFQAFFLVADDIMD 121
Query: 98 GSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQT 157
S TRRGQ CW++ VG+ A ND LL + + R+LK + R +PYYV LL+LF + +QT
Sbjct: 122 QSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVHLLELFLQTAYQT 181
Query: 158 ASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAG-ENLDKHVE 216
GQM+DLIT + DLS +S ++ IV+YKTA+YSFYLPVA A+ M G ++ ++H
Sbjct: 182 ELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGIDSKEEHEN 241
Query: 217 VKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVH 276
K IL++MG YFQ+QDD+LDCFG P + GKVGTDI+D KCSWLVV+ L+ EQ++L+
Sbjct: 242 AKAILLEMGEYFQIQDDYLDCFGDPALTGKVGTDIQDNKCSWLVVQCLQRVTPEQRQLLE 301
Query: 277 ENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAK 336
+NYG+ +P VAKVKELY+ + + AF +YE+ SY +L + IE H + + + K
Sbjct: 302 DNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSYRRLQELIEKHSNRLPKEIFLGLAQK 361
Query: 337 IYKRQK 342
IYKRQK
Sbjct: 362 IYKRQK 367
>RGD|68953 [details] [associations]
symbol:Fdps "farnesyl diphosphate synthase" species:10116 "Rattus
norvegicus" [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI] [GO:0004337 "geranyltranstransferase activity"
evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005777
"peroxisome" evidence=IDA] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0008584 "male gonad development" evidence=IEP] [GO:0033384
"geranyl diphosphate biosynthetic process" evidence=IEA] [GO:0033574
"response to testosterone stimulus" evidence=IEP] [GO:0042493
"response to drug" evidence=IEP] [GO:0043434 "response to peptide
hormone stimulus" evidence=IEP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IEA;IDA] [GO:0045542 "positive
regulation of cholesterol biosynthetic process" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0061051 "positive
regulation of cell growth involved in cardiac muscle cell
development" evidence=IMP] [GO:0070723 "response to cholesterol"
evidence=IEP] [GO:0071398 "cellular response to fatty acid"
evidence=IEP] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 RGD:68953 GO:GO:0005777
GO:GO:0042493 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0005759 GO:GO:0046872 GO:GO:0043434 GO:GO:0007283
GO:GO:0006695 GO:GO:0045542 GO:GO:0008584 GO:GO:0071398
GO:GO:0070723 GO:GO:0033574 GO:GO:0061051 eggNOG:COG0142
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 HOGENOM:HOG000160912 KO:K00787 CTD:2224
HOVERGEN:HBG005741 OrthoDB:EOG4ZGPCS EMBL:M34477 EMBL:M17300
EMBL:BC059125 IPI:IPI00325147 PIR:A34713 PIR:B34713
RefSeq:NP_114028.1 UniGene:Rn.2848 ProteinModelPortal:P05369
SMR:P05369 STRING:P05369 PhosphoSite:P05369 PRIDE:P05369
GeneID:83791 KEGG:rno:83791 UCSC:RGD:68953 SABIO-RK:P05369
ChEMBL:CHEMBL1075093 NextBio:616373 ArrayExpress:P05369
Genevestigator:P05369 Uniprot:P05369
Length = 353
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 156/336 (46%), Positives = 226/336 (67%)
Query: 8 FIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKEL 67
F ++ VL ++ L P + D +R + +L+YN GGK NRGL+VV +++ L E ++
Sbjct: 21 FSQIVKVLTEDELGHPE-KGDAITR--IKEVLEYNTVGGKYNRGLTVVQTFQELVEPRKQ 77
Query: 68 TDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRN 127
+ + +GWC+E LQA+FLVLDDIMD S+TRRGQ CW++ P +G+ A ND +LL
Sbjct: 78 DAESLQRALTVGWCVELLQAFFLVLDDIMDSSYTRRGQICWYQKPGIGLDAINDALLLEA 137
Query: 128 HISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIV 187
I R+LK + R++PYY++LL+LF + +QT GQ +DLIT +G+ DL +Y+ ++ IV
Sbjct: 138 AIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLITAPQGQVDLGRYTEKRYKSIV 197
Query: 188 QYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK 246
+YKTA+YSFYLP+A A+ MAG + +K H IL++MG +FQ+QDD+LD FG P V GK
Sbjct: 198 KYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEMGEFFQIQDDYLDLFGDPSVTGK 257
Query: 247 VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEY 306
VGTDI+D KCSWLVV+ L +Q++++ ENYG+ DP VA+VK LY+ LDL F +Y
Sbjct: 258 VGTDIQDNKCSWLVVQCLLRATPQQRQILEENYGQKDPEKVARVKALYEELDLRSVFFKY 317
Query: 307 EKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
E++SY +L IE ++ KIYKR+K
Sbjct: 318 EEDSYNRLKSLIEQCSAPLPPSIFLELANKIYKRRK 353
>MGI|MGI:104888 [details] [associations]
symbol:Fdps "farnesyl diphosphate synthetase" species:10090
"Mus musculus" [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=ISO] [GO:0004337 "geranyltranstransferase activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005759 "mitochondrial matrix"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0008202 "steroid metabolic
process" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=ISO] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0045337 "farnesyl diphosphate biosynthetic process"
evidence=ISO] [GO:0045542 "positive regulation of cholesterol
biosynthetic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0061051 "positive regulation of cell growth
involved in cardiac muscle cell development" evidence=ISO]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 MGI:MGI:104888
GO:GO:0005739 GO:GO:0005634 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006695 eggNOG:COG0142
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
HOGENOM:HOG000160912 KO:K00787 OMA:VAMQRAN CTD:2224
HOVERGEN:HBG005741 OrthoDB:EOG4ZGPCS EMBL:AF309508 EMBL:AK088601
EMBL:BC048497 IPI:IPI00120457 RefSeq:NP_001240680.1
RefSeq:NP_608219.1 UniGene:Mm.39472 UniGene:Mm.490094
ProteinModelPortal:Q920E5 SMR:Q920E5 STRING:Q920E5
PhosphoSite:Q920E5 PaxDb:Q920E5 PRIDE:Q920E5
Ensembl:ENSMUST00000081848 GeneID:110196 KEGG:mmu:110196
GeneTree:ENSGT00530000064127 InParanoid:Q920E5 NextBio:363511
Bgee:Q920E5 CleanEx:MM_FDPS Genevestigator:Q920E5
GermOnline:ENSMUSG00000059743 Uniprot:Q920E5
Length = 353
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 156/336 (46%), Positives = 224/336 (66%)
Query: 8 FIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKEL 67
F ++ VL ++ L P D+ + +L+YN GGK NRGL+VV +++ L E K+
Sbjct: 21 FSQIVKVLTEKELGHPEIG---DAIARLKEVLEYNALGGKYNRGLTVVQAFQELVEPKKQ 77
Query: 68 TDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRN 127
+ + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A ND +LL
Sbjct: 78 DAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAINDALLLEA 137
Query: 128 HISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIV 187
I R+LK + R++PYY++LL+LF + +QT GQ +DL+T +G DL +Y+ ++ IV
Sbjct: 138 SIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLMTAPQGHVDLGRYTEKRYKSIV 197
Query: 188 QYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK 246
+YKTA+YSFYLP+A A+ MAG + +K H IL++MG +FQVQDD+LD FG P V GK
Sbjct: 198 KYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMGEFFQVQDDYLDLFGDPSVTGK 257
Query: 247 VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEY 306
VGTDI+D KCSWLVV+ L + +Q++++ ENYG+ DP VA+VK LY+ LDL+ AF +Y
Sbjct: 258 VGTDIQDNKCSWLVVQCLLRASPQQRQILEENYGQKDPEKVARVKALYEALDLQSAFFKY 317
Query: 307 EKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
E++SY +L IE ++ KIYKR+K
Sbjct: 318 EEDSYNRLKSLIEQCSAPLPPSIFMELANKIYKRRK 353
>ASPGD|ASPL0000012297 [details] [associations]
symbol:AN8012 species:162425 "Emericella nidulans"
[GO:0016125 "sterol metabolic process" evidence=RCA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA;RCA]
[GO:0004337 "geranyltranstransferase activity" evidence=IEA;RCA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0004660 "protein farnesyltransferase activity" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IEA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005783 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001302
eggNOG:COG0142 GO:GO:0008299 EMBL:AACD01000139 HOGENOM:HOG000160912
KO:K00787 OMA:FRRFEQH OrthoDB:EOG4SFDFW RefSeq:XP_681281.1
ProteinModelPortal:Q5AUL8 STRING:Q5AUL8
EnsemblFungi:CADANIAT00004032 GeneID:2869054 KEGG:ani:AN8012.2
Uniprot:Q5AUL8
Length = 347
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 166/345 (48%), Positives = 226/345 (65%)
Query: 5 KSRFIEVYGVLKQELLNDPA-FEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKE 63
++ F V+ L + +L+ + ++++W + + NVPGGKLNRGLSV D+ L +
Sbjct: 7 RAAFEAVFPSLAEAMLDHARKYNLPQNAQEWFSKAIHTNVPGGKLNRGLSVPDTGVALLQ 66
Query: 64 GKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGV 123
KEL+++++ + LGW E LQA+FLV DD+MDGS TRRGQPCW+R VG+IA ND
Sbjct: 67 -KELSEEQYKDLATLGWLTELLQAFFLVSDDLMDGSITRRGQPCWYRHQGVGLIAINDAF 125
Query: 124 LLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLH 183
LL + I ILK FR P YVD ++LF+E +QT GQ+ DLIT E + DL+ +S+ +
Sbjct: 126 LLESGIYVILKKQFRSHPAYVDFIELFHETTWQTELGQLCDLITAPEDKVDLNNFSMEKY 185
Query: 184 RRIVQYKTAYYSFYLPVACAL----LMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFG 239
IV YKTAYYSFYLPVA AL L ENL + DIL+ +G YFQVQDD+LD +G
Sbjct: 186 MFIVTYKTAYYSFYLPVALALHYLQLATPENLR---QAHDILIPLGQYFQVQDDYLDAYG 242
Query: 240 SPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDL 299
PEVIGK+GTDI+D KCSWLV +AL+ C+ EQ+K++ YG+ D AKVK +++ LDL
Sbjct: 243 DPEVIGKIGTDIQDNKCSWLVNQALQRCSAEQRKVLDAAYGRKDAEQEAKVKAIFRELDL 302
Query: 300 EGAFVEYEKESYEKLTKSIEAHPTKE--VQAVLKSFLAKIYKRQK 342
E + EYE++ +L I A E + V ++FL KIYKR K
Sbjct: 303 ESVYKEYEEKIVGELKTKIAAVNESEGLKKEVFEAFLGKIYKRSK 347
>UNIPROTKB|F1N431 [details] [associations]
symbol:RUSC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0008299 IPI:IPI00839514 GeneTree:ENSGT00530000063878
EMBL:DAAA02007155 Ensembl:ENSBTAT00000014472 OMA:HEYERES
ArrayExpress:F1N431 Uniprot:F1N431
Length = 421
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 153/342 (44%), Positives = 227/342 (66%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYR-LL 61
D F ++ VL +E + P D+ + +L+YN GGK NRGL+VV ++R L+
Sbjct: 84 DFIQHFSQIVKVLTEEDIGHPEIG---DAITRLKEVLEYNAIGGKYNRGLTVVITFRELV 140
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
+ GK+ D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A ND
Sbjct: 141 EPGKQ-DPDSLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQTCWYQKPGIGLDAIND 199
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
LL + I R+LK + R++PYY+DL++LF + +QT GQ +DLIT +G DL +++
Sbjct: 200 AFLLESSIYRLLKLYCREQPYYLDLIELFLQSSYQTEIGQTLDLITAPQGNVDLGRFTEK 259
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGS 240
++ IV+YKTA+YSFYLPVA A+ MAG + +K H K IL++MG +FQ+QDD+LD FG
Sbjct: 260 RYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHAHAKKILLEMGEFFQIQDDYLDLFGD 319
Query: 241 PEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLE 300
P + GK+GTDI+D KCSWLVV+ L+ + EQ++++ ENYG+ + VA+VK LY+ ++L
Sbjct: 320 PSMTGKIGTDIQDNKCSWLVVQCLQRASPEQRQILQENYGQKEAEKVARVKALYEEMNLS 379
Query: 301 GAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
+++YE++SY + IE + A+ KIYKR+K
Sbjct: 380 AVYMQYEEDSYNHIMGLIEQYAAPLPPAIFLGLAQKIYKRKK 421
>UNIPROTKB|Q8WMY2 [details] [associations]
symbol:FDPS "Farnesyl pyrophosphate synthase" species:9913
"Bos taurus" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 GO:GO:0005737 GO:GO:0019048 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006695
eggNOG:COG0142 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 KO:K00787 EMBL:AF461050 EMBL:BC149572 IPI:IPI00839514
RefSeq:NP_803463.1 UniGene:Bt.23182 ProteinModelPortal:Q8WMY2
SMR:Q8WMY2 STRING:Q8WMY2 PRIDE:Q8WMY2 GeneID:281156 KEGG:bta:281156
CTD:2224 HOVERGEN:HBG005741 NextBio:20805219 ArrayExpress:Q8WMY2
Uniprot:Q8WMY2
Length = 353
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 153/342 (44%), Positives = 227/342 (66%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYR-LL 61
D F ++ VL +E + P D+ + +L+YN GGK NRGL+VV ++R L+
Sbjct: 16 DFIQHFSQIVKVLTEEDIGHPEIG---DAITRLKEVLEYNAIGGKYNRGLTVVITFRELV 72
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
+ GK+ D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A ND
Sbjct: 73 EPGKQ-DPDSLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQTCWYQKPGIGLDAIND 131
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
LL + I R+LK + R++PYY+DL++LF + +QT GQ +DLIT +G DL +++
Sbjct: 132 AFLLESSIYRLLKLYCREQPYYLDLIELFLQSSYQTEIGQTLDLITAPQGNVDLGRFTEK 191
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGS 240
++ IV+YKTA+YSFYLPVA A+ MAG + +K H K IL++MG +FQ+QDD+LD FG
Sbjct: 192 RYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHAHAKKILLEMGEFFQIQDDYLDLFGD 251
Query: 241 PEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLE 300
P + GK+GTDI+D KCSWLVV+ L+ + EQ++++ ENYG+ + VA+VK LY+ ++L
Sbjct: 252 PSMTGKIGTDIQDNKCSWLVVQCLQRASPEQRQILQENYGQKEAEKVARVKALYEEMNLS 311
Query: 301 GAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
+++YE++SY + IE + A+ KIYKR+K
Sbjct: 312 AVYMQYEEDSYNHIMGLIEQYAAPLPPAIFLGLAQKIYKRKK 353
>UNIPROTKB|G4MLE9 [details] [associations]
symbol:MGG_08649 "Farnesyl pyrophosphate synthase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CM001231 GO:GO:0045337 KO:K00787
RefSeq:XP_003711082.1 ProteinModelPortal:G4MLE9
EnsemblFungi:MGG_08649T0 GeneID:2678891 KEGG:mgr:MGG_08649
Uniprot:G4MLE9
Length = 348
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 166/341 (48%), Positives = 224/341 (65%)
Query: 8 FIEVYGVLKQELLNDP-AFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKE 66
F V+ L++ LL +++ W + L+ N GGK NRG+SV DS L E +
Sbjct: 11 FEAVFPKLEEVLLEHAKSYKLPQGEMAWYKKSLETNAIGGKCNRGMSVPDSVSALLE-RP 69
Query: 67 LTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLR 126
L++DE+F ++ LGW E LQA+FLV DDIMD S TRRGQPCW+R VGM+A ND +L
Sbjct: 70 LSEDEYFKAATLGWMTELLQAFFLVSDDIMDSSITRRGQPCWYRQDGVGMVAINDAFMLE 129
Query: 127 NHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRI 186
I +LK FRD P YVDLL+LF+EV +QT GQ+ DL+T E + +L +S+ +R I
Sbjct: 130 AAIYTLLKKFFRDHPAYVDLLELFHEVTYQTEIGQLCDLLTAPEDKVNLDNFSMEKYRFI 189
Query: 187 VQYKTAYYSFYLPVACALLMAGENLDKHVEV-KDILVQMGIYFQVQDDFLDCFGSPEVIG 245
V YKTAYYSFYLPVA AL ++++V +DIL+ MG YFQVQDD+LD FG PE IG
Sbjct: 190 VIYKTAYYSFYLPVALALHQLNIGTPENLKVAEDILIPMGEYFQVQDDYLDNFGLPEHIG 249
Query: 246 KVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVE 305
K+GTDI D KCSWLV +AL + EQ+K++ ENYG+ D A A +K+LY + LE + +
Sbjct: 250 KIGTDIMDNKCSWLVNQALSIATPEQRKILEENYGRKDKANEAVIKKLYDDMGLEQKYKD 309
Query: 306 YEK----ESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
YE+ E EK+++ E+ K ++V ++FL KIYKR K
Sbjct: 310 YEEKVVGEIREKISQIDESKGLK--RSVFETFLEKIYKRSK 348
>POMBASE|SPAC6F12.13c [details] [associations]
symbol:fps1 "geranyltranstransferase Fps1" species:4896
"Schizosaccharomyces pombe" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IGI] [GO:0004337
"geranyltranstransferase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006612 "protein targeting
to membrane" evidence=IC] [GO:0006696 "ergosterol biosynthetic
process" evidence=IGI] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IMP] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISO] [GO:0018342 "protein prenylation"
evidence=IC] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IMP] [GO:0004660 "protein farnesyltransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 PomBase:SPAC6F12.13c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0070317 GenomeReviews:CU329670_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006612 GO:GO:0006995 GO:GO:0006696 eggNOG:COG0142
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0018342 HOGENOM:HOG000160912 KO:K00787 EMBL:D89104 PIR:T11664
PIR:T42081 RefSeq:NP_593299.1 ProteinModelPortal:O14230
STRING:O14230 PRIDE:O14230 EnsemblFungi:SPAC6F12.13c.1
GeneID:2542898 KEGG:spo:SPAC6F12.13c OMA:KANEICI OrthoDB:EOG4SFDFW
NextBio:20803937 Uniprot:O14230
Length = 347
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 154/344 (44%), Positives = 219/344 (63%)
Query: 3 DLKSRFIEVYGVLKQELLND-PAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL 61
D +++F V E++N D +W L +N GGK NRGLSV+DSY +L
Sbjct: 5 DKRAKFESALPVFVDEIVNYLKTINIPDDVTEWYKNSLFHNTLGGKYNRGLSVIDSYEIL 64
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
G L + + ++ LGW +E LQ++FL+ DDIMD S TRRGQPCW+ +P VG IA ND
Sbjct: 65 L-GHPLDEAAYMKAAVLGWMVELLQSFFLIADDIMDASKTRRGQPCWYLMPGVGNIAIND 123
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
++ + I +LK HFR + YVDL++LF++V FQT GQ +DL+T E DLSK+SL
Sbjct: 124 AFMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQTELGQQLDLLTAPEDSVDLSKFSLQ 183
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVE-VKDILVQMGIYFQVQDDFLDCFGS 240
H IV YKTA+YSFYLPVA A+ +AG ++++ +DIL+ +G YFQVQDD+LDC+G
Sbjct: 184 KHSFIVIYKTAFYSFYLPVALAMHLAGVATPENLKCAQDILIILGKYFQVQDDYLDCYGD 243
Query: 241 PEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLE 300
P V GK+GTDI D KCSW++ AL C EQ+ ++ +NYG+ D +VK +++ L++
Sbjct: 244 PTVTGKIGTDILDNKCSWIINLALAKCTPEQRVILDDNYGRKDSESEKRVKAVFEELNIR 303
Query: 301 GAFVEYEKESYEKLTKSIEA--HPTKEVQAVLKSFLAKIYKRQK 342
G F YE+ ++ K I+ T +++ +FL KIYKR K
Sbjct: 304 GEFENYEESEVSEIKKLIDGVDESTGLKKSIFTTFLGKIYKRNK 347
>UNIPROTKB|D0G6X4 [details] [associations]
symbol:FDPS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 GO:GO:0005634 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 KO:K00787 OMA:VAMQRAN CTD:2224 OrthoDB:EOG4ZGPCS
GeneTree:ENSGT00530000064127 EMBL:CU469433 EMBL:AB529527
RefSeq:NP_001172060.1 UniGene:Ssc.57723 ProteinModelPortal:D0G6X4
STRING:D0G6X4 Ensembl:ENSSSCT00000007132 GeneID:100153932
KEGG:ssc:100153932 Uniprot:D0G6X4
Length = 421
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 154/341 (45%), Positives = 223/341 (65%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLK 62
D F ++ VL +E + P D+ + +L+YNV GGK NRG++V+ +R L
Sbjct: 84 DFIQHFSQIVKVLTEEDIGHPEIG---DAVARLKEVLEYNVVGGKYNRGITVLVVFRELV 140
Query: 63 EGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDG 122
E ++ D + +GWCIE LQA+FLV DDI D S TRRGQ CW+R P +G+ A ND
Sbjct: 141 EPRKQDADSLQRALTVGWCIELLQAFFLVADDIEDSSLTRRGQTCWYRKPGIGLDAINDA 200
Query: 123 VLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPL 182
LL I R+LK + R++PYY++L++LF + + T GQ +DLI +G DLS+++
Sbjct: 201 FLLEACIYRLLKFYCREQPYYLNLIELFLQTSYNTEIGQTLDLIAGPQGNVDLSRFTEKR 260
Query: 183 HRRIVQYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGSP 241
++ IV+YKTA+YSFYLPVA A+ MAG + +K H K IL++MG +FQ+QDD+LD FG P
Sbjct: 261 YKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILMEMGEFFQIQDDYLDLFGDP 320
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
V GK+GTDI+D KCSWLVV+ L+ + EQ++++ ENYG+ D VA+VK LY+ ++L+
Sbjct: 321 SVTGKIGTDIQDNKCSWLVVQCLQRASPEQRQILQENYGQKDAEKVARVKALYEEMNLQA 380
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F++YE++SY L IE + A+ KIYKR+K
Sbjct: 381 VFLQYEEDSYSHLMGLIEQYAAPLPPAIFLELAHKIYKRRK 421
>UNIPROTKB|E9PCI9 [details] [associations]
symbol:FDPS "Farnesyl pyrophosphate synthase" species:9606
"Homo sapiens" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:AL139410 GO:GO:0008299 KO:K00787 CTD:2224
RefSeq:NP_001129294.1 RefSeq:NP_001229753.1 UniGene:Hs.335918
DNASU:2224 GeneID:2224 KEGG:hsa:2224 HGNC:HGNC:3631 ChiTaRS:FDPS
GenomeRNAi:2224 NextBio:9017 IPI:IPI00914971
ProteinModelPortal:E9PCI9 SMR:E9PCI9 PRIDE:E9PCI9
Ensembl:ENST00000447866 ArrayExpress:E9PCI9 Bgee:E9PCI9
Uniprot:E9PCI9
Length = 353
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 154/341 (45%), Positives = 222/341 (65%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLK 62
D F ++ VL ++ + P D+ + +L+YN GGK NRGL+VV ++R L
Sbjct: 16 DFVQHFSQIVRVLTEDEMGHPEIG---DAIARLKEVLEYNAIGGKYNRGLTVVVAFRELV 72
Query: 63 EGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDG 122
E ++ D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P VG+ A ND
Sbjct: 73 EPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDA 132
Query: 123 VLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPL 182
LL I R+LK + R++PYY++L++LF + +QT GQ +DL+T +G DL +++
Sbjct: 133 NLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKR 192
Query: 183 HRRIVQYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGSP 241
++ IV+YKTA+YSFYLP+A A+ MAG + +K H K IL++MG +FQ+QDD+LD FG P
Sbjct: 193 YKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDP 252
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
V GK+GTDI+D KCSWLVV+ L+ EQ +++ ENYG+ + VA+VK LY+ LDL
Sbjct: 253 SVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPA 312
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F++YE++SY + IE + AV KIYKR+K
Sbjct: 313 VFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKRRK 353
>UNIPROTKB|P14324 [details] [associations]
symbol:FDPS "Farnesyl pyrophosphate synthase" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_111217 InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0019048 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006695 EMBL:CH471121 EMBL:AL139410
eggNOG:COG0142 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 HOGENOM:HOG000160912 KO:K00787 OMA:VAMQRAN CTD:2224
HOVERGEN:HBG005741 EMBL:D14697 EMBL:AK291084 EMBL:BC010004
EMBL:J05262 EMBL:M29863 IPI:IPI00914566 PIR:A35726
RefSeq:NP_001129293.1 RefSeq:NP_001129294.1 RefSeq:NP_001229753.1
RefSeq:NP_001229754.1 RefSeq:NP_001995.1 UniGene:Hs.335918 PDB:1YQ7
PDB:1YV5 PDB:1ZW5 PDB:2F7M PDB:2F89 PDB:2F8C PDB:2F8Z PDB:2F92
PDB:2F94 PDB:2F9K PDB:2OPM PDB:2OPN PDB:2QIS PDB:2RAH PDB:2VF6
PDB:3B7L PDB:3CP6 PDB:3N1V PDB:3N1W PDB:3N3L PDB:3N45 PDB:3N46
PDB:3N49 PDB:3N5H PDB:3N5J PDB:3N6K PDB:3RYE PDB:3S4J PDB:4DEM
PDB:4H5C PDB:4H5D PDB:4H5E PDBsum:1YQ7 PDBsum:1YV5 PDBsum:1ZW5
PDBsum:2F7M PDBsum:2F89 PDBsum:2F8C PDBsum:2F8Z PDBsum:2F92
PDBsum:2F94 PDBsum:2F9K PDBsum:2OPM PDBsum:2OPN PDBsum:2QIS
PDBsum:2RAH PDBsum:2VF6 PDBsum:3B7L PDBsum:3CP6 PDBsum:3N1V
PDBsum:3N1W PDBsum:3N3L PDBsum:3N45 PDBsum:3N46 PDBsum:3N49
PDBsum:3N5H PDBsum:3N5J PDBsum:3N6K PDBsum:3RYE PDBsum:3S4J
PDBsum:4DEM PDBsum:4H5C PDBsum:4H5D PDBsum:4H5E
ProteinModelPortal:P14324 SMR:P14324 IntAct:P14324
MINT:MINT-2858951 STRING:P14324 PhosphoSite:P14324 DMDM:215274250
PaxDb:P14324 PRIDE:P14324 DNASU:2224 Ensembl:ENST00000356657
Ensembl:ENST00000368356 GeneID:2224 KEGG:hsa:2224 UCSC:uc001fkc.2
GeneCards:GC01P155278 H-InvDB:HIX0025342 HGNC:HGNC:3631
HPA:HPA028200 MIM:134629 neXtProt:NX_P14324 PharmGKB:PA28075
InParanoid:P14324 OrthoDB:EOG4ZGPCS PhylomeDB:P14324
BioCyc:MetaCyc:ENSG00000160752-MONOMER SABIO-RK:P14324
BindingDB:P14324 ChEMBL:CHEMBL1782 ChiTaRS:FDPS DrugBank:DB00630
DrugBank:DB00710 DrugBank:DB00282 DrugBank:DB00884 DrugBank:DB00399
EvolutionaryTrace:P14324 GenomeRNAi:2224 NextBio:9017
ArrayExpress:P14324 Bgee:P14324 CleanEx:HS_FDPS
Genevestigator:P14324 GermOnline:ENSG00000160752 Uniprot:P14324
Length = 419
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 154/341 (45%), Positives = 222/341 (65%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLK 62
D F ++ VL ++ + P D+ + +L+YN GGK NRGL+VV ++R L
Sbjct: 82 DFVQHFSQIVRVLTEDEMGHPEIG---DAIARLKEVLEYNAIGGKYNRGLTVVVAFRELV 138
Query: 63 EGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDG 122
E ++ D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P VG+ A ND
Sbjct: 139 EPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDA 198
Query: 123 VLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPL 182
LL I R+LK + R++PYY++L++LF + +QT GQ +DL+T +G DL +++
Sbjct: 199 NLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKR 258
Query: 183 HRRIVQYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGSP 241
++ IV+YKTA+YSFYLP+A A+ MAG + +K H K IL++MG +FQ+QDD+LD FG P
Sbjct: 259 YKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDP 318
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
V GK+GTDI+D KCSWLVV+ L+ EQ +++ ENYG+ + VA+VK LY+ LDL
Sbjct: 319 SVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPA 378
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F++YE++SY + IE + AV KIYKR+K
Sbjct: 379 VFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKRRK 419
>UNIPROTKB|F1P926 [details] [associations]
symbol:FDPS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0008299 OMA:VAMQRAN GeneTree:ENSGT00530000064127
EMBL:AAEX03005338 Ensembl:ENSCAFT00000026846 Uniprot:F1P926
Length = 421
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 155/343 (45%), Positives = 225/343 (65%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLK 62
D F ++ +L ++ + P D+ + +L+YN GGK RGL+V+ +++ L
Sbjct: 84 DFIQHFPQIVKILTEDGMGHPE---TGDAIARLKEVLEYNAVGGKYQRGLTVLIAFQELV 140
Query: 63 EGKELTDDEFFLSSAL--GWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAN 120
E ++ D L AL GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A N
Sbjct: 141 EPRK--QDAASLRRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAIN 198
Query: 121 DGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSL 180
D +LL I R+LK + R++PYY++L++LF + +QT GQ +DLIT +G DLS+++
Sbjct: 199 DALLLEACIYRLLKVYCREQPYYLNLIELFLQSSYQTEIGQTLDLITAPQGSVDLSRFTE 258
Query: 181 PLHRRIVQYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFG 239
++ IV+YKTA+YSFYLPVA A+ MAG + +K H K IL++MG +FQ+QDDFLD FG
Sbjct: 259 KRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDFLDLFG 318
Query: 240 SPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDL 299
P V GK+GTDI+D KCSWLVV+ L+ + EQ+K++ ENYG+ + VA+VK LY+ L+L
Sbjct: 319 DPSVTGKIGTDIQDNKCSWLVVQCLQQASPEQRKVLQENYGQKEAEKVARVKALYEELNL 378
Query: 300 EGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F +YE++SY +L IE + A+ IYKR+K
Sbjct: 379 PAVFTQYEEDSYSRLMSLIERCASPLPPAIFLGLAHNIYKRKK 421
>FB|FBgn0025373 [details] [associations]
symbol:Fpps "Farnesyl pyrophosphate synthase" species:7227
"Drosophila melanogaster" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS;NAS] [GO:0004161
"dimethylallyltranstransferase activity" evidence=NAS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=IC]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008354 "germ cell migration" evidence=IMP] [GO:0035220 "wing
disc development" evidence=IGI] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:AE013599 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0035220 GO:GO:0008299
GO:GO:0008354 GO:GO:0004161 GO:GO:0004337 KO:K00787 OMA:VAMQRAN
GeneTree:ENSGT00530000064127 HSSP:P08836 FlyBase:FBgn0025373
EMBL:AF132554 EMBL:AY071445 RefSeq:NP_477380.1 UniGene:Dm.3229
SMR:Q7KN61 IntAct:Q7KN61 STRING:Q7KN61 EnsemblMetazoa:FBtr0088170
GeneID:36209 KEGG:dme:Dmel_CG12389 UCSC:CG12389-RA CTD:36209
InParanoid:Q7KN61 GenomeRNAi:36209 NextBio:797354 Uniprot:Q7KN61
Length = 419
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 141/312 (45%), Positives = 206/312 (66%)
Query: 30 DSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYF 89
D+ +W ++L YNVP GK NRG+ V +Y+ L ++LT + L+ LGWC+E LQ++F
Sbjct: 109 DAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPENIKLAQYLGWCVEMLQSFF 168
Query: 90 LVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDL 149
++ DD+MD S TRRGQPCW +V VG+ A ND +++ N + ILK HF YV L++L
Sbjct: 169 IISDDVMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAILKKHFSHLDCYVALMEL 228
Query: 150 FNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAG- 208
F+E+ + T GQ +D + + + +S++++ ++ IV+ KTAYYSFYLP A AL +AG
Sbjct: 229 FHEITYITTCGQSLDQLNS---NRCVSEFTMENYKAIVENKTAYYSFYLPFALALHLAGY 285
Query: 209 ENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCN 268
++ + + K IL++MG +FQVQDDFLDCFG+PEV GK+GTDI+D KCSWL V A++ N
Sbjct: 286 KDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRAN 345
Query: 269 EEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQA 328
EQK+++ + YGK +PA V +VKELYK L L + +E+ESY + I+
Sbjct: 346 VEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQ 405
Query: 329 VLKSFLAKIYKR 340
L KIY+R
Sbjct: 406 TFLQILNKIYQR 417
>DICTYBASE|DDB_G0278823 [details] [associations]
symbol:DDB_G0278823 "putative farnesyl pyrophosphate
synthetase" species:44689 "Dictyostelium discoideum" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0008202 "steroid metabolic process" evidence=IEA]
[GO:0006695 "cholesterol biosynthetic process" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 dictyBase:DDB_G0278823 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006695 EMBL:AAFI02000024 eggNOG:COG0142 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 KO:K00787
ProtClustDB:CLSZ2430738 HSSP:P14324 RefSeq:XP_641989.1
ProteinModelPortal:Q54XP1 STRING:Q54XP1 EnsemblProtists:DDB0206219
GeneID:8621721 KEGG:ddi:DDB_G0278823 InParanoid:Q54XP1 OMA:FADPNTI
Uniprot:Q54XP1
Length = 356
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 146/349 (41%), Positives = 220/349 (63%)
Query: 3 DLKSRFIEVYGVLKQELLND-PAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL 61
++ F ++ +L E+ + +F +S W++ ++ N GGK+NRG+SV++S L
Sbjct: 10 EVLEEFANLFPILLNEIKKELEKIDFPKESIHWIETVIKANSTGGKMNRGISVLESLESL 69
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPK------VG 115
EG+ LT E F + LGWC+E QA +LV DDIMD S RRG+PCW++ + VG
Sbjct: 70 NEGRALTRHEIFQAQTLGWCVEIFQACYLVSDDIMDQSLKRRGKPCWYKQKRPNSDQEVG 129
Query: 116 MIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITT-IEGEKD 174
+ A ND ++ + + +L+ +F+++ YY+++++LF++ FQT GQ++DL T I G D
Sbjct: 130 LAAINDSFIIESCVFILLEKYFKNESYYLNIVELFHKTGFQTQLGQLLDLTTQPIRG--D 187
Query: 175 LSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDD 233
S +L H RI +YKTAYYSF+ PVA A+LM+ N ++ KDIL+ MG+YFQVQDD
Sbjct: 188 FSSINLKNHTRITEYKTAYYSFFFPVALAMLMSKINHEQAFTTAKDILLPMGVYFQVQDD 247
Query: 234 FLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKEL 293
FLDC+GSPEV GK+G DIE+ KCSW++ +A+ +Q L+ ++YG +P V VK++
Sbjct: 248 FLDCYGSPEVFGKIGRDIEENKCSWMICQAILNGTPDQINLLKKHYGFDNPTDVEIVKKI 307
Query: 294 YKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
YK ++LE F +YE SY L I+ +V L+KIYKR K
Sbjct: 308 YKEINLEKIFKDYENTSYNFLIDKIKTTCIYLPPSVFLKILSKIYKRDK 356
>UNIPROTKB|G3MZT9 [details] [associations]
symbol:G3MZT9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
GO:GO:0005739 GO:GO:0005634 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
GeneTree:ENSGT00530000064127 EMBL:DAAA02053390
Ensembl:ENSBTAT00000064336 OMA:SEYERES Uniprot:G3MZT9
Length = 330
Score = 372 (136.0 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
Identities = 74/155 (47%), Positives = 107/155 (69%)
Query: 189 YKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKV 247
YKTA+YSFYLPVA A+ MAG + +K H K I+++MG +FQ+QDD+LD FG P V GK+
Sbjct: 182 YKTAFYSFYLPVAAAMYMAGIDGEKEHAHAKKIVLEMGEFFQIQDDYLDLFGDPSVTGKI 241
Query: 248 GTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYE 307
GTD +D KCSWLVV+ L+ + EQ++++ ENYG+ + VA+VK LY+ ++L +++YE
Sbjct: 242 GTD-QD-KCSWLVVQCLQRASPEQRQILQENYGQKEAEKVARVKALYEEMNLSAVYMQYE 299
Query: 308 KESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
++SY + IE P A+ KIYKR+K
Sbjct: 300 EDSYNHIMGLIEHLPP----AIFLGLAQKIYKRKK 330
Score = 315 (115.9 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
Identities = 72/166 (43%), Positives = 100/166 (60%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYR-LL 61
D F + VL +E + P D+ + +L+YN GGK NRGL+VV ++R L+
Sbjct: 25 DFIQHFSQTVKVLTEEDIGHPEIG---DAITRLKEVLEYNAIGGKYNRGLTVVVTFRELV 81
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
+ GKE D + +GWC+E LQA+FLV DDIMD S TR GQ CW++ P +G A ND
Sbjct: 82 EPGKE-DPDSLQRALTVGWCVELLQAFFLVSDDIMDSSLTRWGQTCWYQKPGIGSDAIND 140
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLIT 167
LL + I R+LK + R++PYY+DL++ QT GQ +DLIT
Sbjct: 141 AFLLESSIHRLLKLYCREQPYYLDLIE-------QTEIGQTLDLIT 179
>UNIPROTKB|F1LND7 [details] [associations]
symbol:Fdps "Farnesyl pyrophosphate synthase" species:10116
"Rattus norvegicus" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
RGD:68953 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 GO:GO:0008299 IPI:IPI00325147
GeneTree:ENSGT00530000063878 Ensembl:ENSRNOT00000065065
ArrayExpress:F1LND7 Uniprot:F1LND7
Length = 287
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 128/269 (47%), Positives = 187/269 (69%)
Query: 8 FIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKEL 67
F ++ VL ++ L P + D +R + +L+YN GGK NRGL+VV +++ L E ++
Sbjct: 21 FSQIVKVLTEDELGHPE-KGDAITR--IKEVLEYNTVGGKYNRGLTVVQTFQELVEPRKQ 77
Query: 68 TDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRN 127
+ + +GWC+E LQA+FLVLDDIMD SHTRRGQ CW++ P +G+ A ND +LL
Sbjct: 78 DAESLQRALTVGWCVELLQAFFLVLDDIMDSSHTRRGQICWYQKPGIGLDAINDALLLEA 137
Query: 128 HISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIV 187
I R+LK + R++PYY++LL+LF + +QT GQ +DLIT +G+ DL +Y+ ++ IV
Sbjct: 138 AIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLITAPQGQVDLGRYTEKRYKSIV 197
Query: 188 QYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK 246
+YKTA+YSFYLP+A A+ MAG + +K H IL++MG +FQ+QDD+LD FG P V GK
Sbjct: 198 KYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEMGEFFQIQDDYLDLFGDPSVTGK 257
Query: 247 VGTDIEDYKCSWLVVKALELCNEEQKKLV 275
VGTDI+D KCSWLVV+ L +Q++++
Sbjct: 258 VGTDIQDNKCSWLVVQCLLRATPQQRQIL 286
>POMBASE|SPBC36.06c [details] [associations]
symbol:spo9 "farnesyl pyrophosphate synthetase"
species:4896 "Schizosaccharomyces pombe" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006612 "protein targeting
to membrane" evidence=IC] [GO:0006696 "ergosterol biosynthetic
process" evidence=ISS] [GO:0016117 "carotenoid biosynthetic
process" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IMP] [GO:0030437 "ascospore formation" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 PomBase:SPBC36.06c
GO:GO:0005829 GO:GO:0005634 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006612 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0030437 GO:GO:0016117 GO:GO:0006696
eggNOG:COG0142 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 GO:GO:0004660
GO:GO:0018342 HOGENOM:HOG000160912 KO:K00787 PIR:T40301
RefSeq:NP_595334.1 HSSP:P14324 ProteinModelPortal:O59703
STRING:O59703 EnsemblFungi:SPBC36.06c.1 GeneID:2540933
KEGG:spo:SPBC36.06c OMA:DIQENKC OrthoDB:EOG4NPBDJ NextBio:20802048
Uniprot:O59703
Length = 351
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 133/345 (38%), Positives = 200/345 (57%)
Query: 4 LKSRFIEVYGVLKQ---ELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRL 60
+K R ++ + V+ + E+L + F ++ + + + N GGK NRGL+V+ S
Sbjct: 11 IKKRLLDFFPVVLEGIREILESMQY-FPEETEKLL-YSIKRNTLGGKNNRGLAVLQSLTS 68
Query: 61 LKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAN 120
L +EL + EF ++ LGW IE LQ FL+ DDIMD S RRG CW+ V V A N
Sbjct: 69 LIN-RELEEAEFRDAALLGWLIEILQGCFLMADDIMDQSIKRRGLDCWYLVVGVRR-AIN 126
Query: 121 DGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSL 180
+ LL I +++ +FR+ PYYVDLLD F EV F T GQ DL+++ +GE L + L
Sbjct: 127 ESQLLEACIPLLIRKYFRNMPYYVDLLDTFREVTFLTELGQQEDLLSSRDGEASLRSFDL 186
Query: 181 PLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQM-GIYFQVQDDFLDCFG 239
+ I+ YKT++YSFYLP+ CALL++ + K + L ++ G YFQVQDD+LDCFG
Sbjct: 187 MKYDFIITYKTSFYSFYLPIKCALLLSRNSNQKAYDTTIKLSKLLGYYFQVQDDYLDCFG 246
Query: 240 SPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDL 299
V+GKVG DI+D KC+WLV A + + +Q L+ +YGK +A +K+LY L +
Sbjct: 247 DYTVLGKVGMDIQDNKCTWLVCYAEKFASADQLNLLRAHYGKAGSENIAVIKQLYHELQI 306
Query: 300 EGAFVEYEKESYEKLTKSIEA--HPTKEVQAVLKSFLAKIYKRQK 342
+ ++E + + ++K I+ T + + F IYKR +
Sbjct: 307 PELYHKFEDDMVDSISKEIDLIDESTGLKKCIFTKFFQLIYKRSR 351
>GENEDB_PFALCIPARUM|PF11_0295 [details] [associations]
symbol:PF11_0295 "farnesyl pyrophosphate
synthase, putative" species:5833 "Plasmodium falciparum"
[GO:0004337 "geranyltranstransferase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE014186 GO:GO:0008299 GO:GO:0004337
HOGENOM:HOG000160912 KO:K00787 RefSeq:XP_001347966.2
ProteinModelPortal:Q8II79 EnsemblProtists:PF11_0295:mRNA
GeneID:810842 KEGG:pfa:PF11_0295 EuPathDB:PlasmoDB:PF3D7_1128400
ProtClustDB:CLSZ2432712 BindingDB:Q8II79 ChEMBL:CHEMBL3283
Uniprot:Q8II79
Length = 376
Score = 327 (120.2 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 59/164 (35%), Positives = 108/164 (65%)
Query: 170 EGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDK--HVEVKDILVQMGIY 227
E + +++ + +++ I+ +KTAYYSF+LP+ C + M G +LD + +V++I + MG Y
Sbjct: 203 ENKININMLNFKVYQNIIIHKTAYYSFFLPIVCGMQMGGISLDNLLYKKVENIAILMGEY 262
Query: 228 FQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACV 287
FQV DD++D FG + GKVG+DI++ K +W ++KA ELC++ +K+ + NYGK + C+
Sbjct: 263 FQVHDDYIDTFGDSKKTGKVGSDIQNNKLTWPLIKAFELCSQPEKEDIIRNYGKDNVTCI 322
Query: 288 AKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLK 331
+ ++Y+ ++ +VEYEK+ K+ ++I + ++ VLK
Sbjct: 323 KFINDIYEHYNIRDHYVEYEKKQKMKILEAINQLHHEGIEYVLK 366
Score = 238 (88.8 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 55/137 (40%), Positives = 79/137 (57%)
Query: 38 MLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMD 97
+ DYN GGK NRG+ V+ Y +K +++ +E+ + + WCIE LQA FLV DDIMD
Sbjct: 52 LFDYNCLGGKNNRGILVILIYEYVKN-RDINCNEWEKVACIAWCIEILQASFLVADDIMD 110
Query: 98 GSHTRRGQPCWFRVPKVGMI-AANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQ 156
TRR + CW+ + V + A ND LL N I ++L + R+ Y+DL+ F E +
Sbjct: 111 KGETRRNKHCWYLLKDVEIKNAVNDVFLLYNAIYKLLDVYLRNDNCYLDLITSFREATLK 170
Query: 157 TASGQMIDLITTIEGEK 173
T GQ +D T I +K
Sbjct: 171 TIVGQHLD--TNIFSDK 185
>UNIPROTKB|Q8II79 [details] [associations]
symbol:PF11_0295 "Farnesyl pyrophosphate synthase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE014186 GO:GO:0008299 GO:GO:0004337
HOGENOM:HOG000160912 KO:K00787 RefSeq:XP_001347966.2
ProteinModelPortal:Q8II79 EnsemblProtists:PF11_0295:mRNA
GeneID:810842 KEGG:pfa:PF11_0295 EuPathDB:PlasmoDB:PF3D7_1128400
ProtClustDB:CLSZ2432712 BindingDB:Q8II79 ChEMBL:CHEMBL3283
Uniprot:Q8II79
Length = 376
Score = 327 (120.2 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 59/164 (35%), Positives = 108/164 (65%)
Query: 170 EGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDK--HVEVKDILVQMGIY 227
E + +++ + +++ I+ +KTAYYSF+LP+ C + M G +LD + +V++I + MG Y
Sbjct: 203 ENKININMLNFKVYQNIIIHKTAYYSFFLPIVCGMQMGGISLDNLLYKKVENIAILMGEY 262
Query: 228 FQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACV 287
FQV DD++D FG + GKVG+DI++ K +W ++KA ELC++ +K+ + NYGK + C+
Sbjct: 263 FQVHDDYIDTFGDSKKTGKVGSDIQNNKLTWPLIKAFELCSQPEKEDIIRNYGKDNVTCI 322
Query: 288 AKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLK 331
+ ++Y+ ++ +VEYEK+ K+ ++I + ++ VLK
Sbjct: 323 KFINDIYEHYNIRDHYVEYEKKQKMKILEAINQLHHEGIEYVLK 366
Score = 238 (88.8 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 55/137 (40%), Positives = 79/137 (57%)
Query: 38 MLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMD 97
+ DYN GGK NRG+ V+ Y +K +++ +E+ + + WCIE LQA FLV DDIMD
Sbjct: 52 LFDYNCLGGKNNRGILVILIYEYVKN-RDINCNEWEKVACIAWCIEILQASFLVADDIMD 110
Query: 98 GSHTRRGQPCWFRVPKVGMI-AANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQ 156
TRR + CW+ + V + A ND LL N I ++L + R+ Y+DL+ F E +
Sbjct: 111 KGETRRNKHCWYLLKDVEIKNAVNDVFLLYNAIYKLLDVYLRNDNCYLDLITSFREATLK 170
Query: 157 TASGQMIDLITTIEGEK 173
T GQ +D T I +K
Sbjct: 171 TIVGQHLD--TNIFSDK 185
>DICTYBASE|DDB_G0268742 [details] [associations]
symbol:DDB_G0268742 species:44689 "Dictyostelium
discoideum" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0008203
"cholesterol metabolic process" evidence=IEA] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045337 "farnesyl diphosphate biosynthetic process"
evidence=IEA] [GO:0033384 "geranyl diphosphate biosynthetic
process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
dictyBase:DDB_G0268742 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006695
EMBL:AAFI02000004 eggNOG:COG0142 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 KO:K00787 HSSP:P14324 OMA:DIQENKC
RefSeq:XP_646923.1 ProteinModelPortal:Q55EU7 STRING:Q55EU7
EnsemblProtists:DDB0190001 GeneID:8616611 KEGG:ddi:DDB_G0268742
InParanoid:Q55EU7 Uniprot:Q55EU7
Length = 393
Score = 286 (105.7 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 59/150 (39%), Positives = 96/150 (64%)
Query: 78 LGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVP--------KVGMIAANDGVLLRNHI 129
+GWC+E+L ++FL+ DDIMD TRRG+ CW+R P KVGM+A ND VL+ + +
Sbjct: 100 IGWCLEFL-SFFLITDDIMDNGLTRRGELCWYRHPSPFNPTEHKVGMLAINDSVLIESFL 158
Query: 130 SRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQY 189
ILK +F++K YYVDL +LF+E F TA+GQ++D + D + ++ + +I
Sbjct: 159 FFILKKYFKNKSYYVDLFELFHESIFYTATGQLLDSSSFHLKRGDFTNFTFENYSQICIN 218
Query: 190 KTAYYSFYLPVACALLMAGENLDKHVEVKD 219
K++++ FYL + A+L+ + +D + + KD
Sbjct: 219 KSSHHVFYLQIKIAILLT-DIMDNNEKQKD 247
Score = 265 (98.3 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 50/128 (39%), Positives = 77/128 (60%)
Query: 217 VKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVH 276
+K+I +GIY Q QDD+ DCFG P+VIGK GTDI++ KCSWL+ KA +CN +Q +
Sbjct: 266 IKNICFNLGIYGQAQDDYFDCFGDPKVIGKTGTDIQENKCSWLICKANTICNNDQLNQLK 325
Query: 277 ENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEV--QAVLKSFL 334
+NYG + V+ VK ++K +++ + +E E Y + K I+ + +L L
Sbjct: 326 KNYGNDNENDVSIVKSIFKEINIPKHYENFENEQYNSILKEIQKLSIISLPKSEILLFLL 385
Query: 335 AKIYKRQK 342
K++KR K
Sbjct: 386 KKLFKRSK 393
Score = 162 (62.1 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 5 KSRFIEVYGVLKQELLND-PAFEFDHDSRQWVDRMLDY-NVPGGKLNRGLSVVDSYRLLK 62
+ FI+VY +LK ++ ++ P + ++ ++ +L+ + GGK+ RGL + S L
Sbjct: 13 REEFIKVYSILKNDVFDELPKMKLASNAIDYIKELLNSPTITGGKMYRGLGFLYSLNTLL 72
Query: 63 EGKELTDD----------EFFLSSA--LGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFR 110
K D+ E A +GWC+E+L ++FL+ DDIMD TRRG+ CW+R
Sbjct: 73 IAKNNFDNNNNNNNNKNSETSQHEARIIGWCLEFL-SFFLITDDIMDNGLTRRGELCWYR 131
Query: 111 VP 112
P
Sbjct: 132 HP 133
>UNIPROTKB|F1N0Q7 [details] [associations]
symbol:RUSC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] Pfam:PF00018 InterPro:IPR000092
InterPro:IPR001452 Pfam:PF00348 PROSITE:PS00723 PROSITE:PS50002
SMART:SM00326 GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 SUPFAM:SSF50044 GO:GO:0008299
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
GeneTree:ENSGT00530000063878 EMBL:DAAA02007155 IPI:IPI00904174
Ensembl:ENSBTAT00000009272 ArrayExpress:F1N0Q7 Uniprot:F1N0Q7
Length = 869
Score = 521 (188.5 bits), Expect = 2.2e-49, P = 2.2e-49
Identities = 115/296 (38%), Positives = 179/296 (60%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYR-LL 61
D F ++ VL +E + P D+ + +L+YN GGK NRGL+VV ++R L+
Sbjct: 84 DFIQHFSQIVKVLTEEDIGHPEIG---DAITRLKEVLEYNAIGGKYNRGLTVVITFRELV 140
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
+ GK+ D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A ND
Sbjct: 141 EPGKQ-DPDSLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQTCWYQKPGIGLDAIND 199
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
LL + I R+LK + R++PYY+DL++LF + +QT GQ +DLIT +G DL +++
Sbjct: 200 AFLLESSIYRLLKLYCREQPYYLDLIELFLQSSYQTEIGQTLDLITAPQGNVDLGRFTEK 259
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGS 240
++ IV+YKTA+YSFYLPVA A+ MAG + +K H K IL++MG +FQ+Q+++
Sbjct: 260 RYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHAHAKKILLEMGEFFQIQENYGQ--KE 317
Query: 241 PEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPAC-VAKVKELYK 295
E + +V E+ S + ++ E L+ + + PA + +++YK
Sbjct: 318 AEKVARVKALYEEMNLSAVYMQYEEDSYNHIMGLIEQYAAPLPPAIFLGLAQKIYK 373
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 275 VHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFL 334
+ ENYG+ + VA+VK LY+ ++L +++YE++SY + IE + A+
Sbjct: 309 IQENYGQKEAEKVARVKALYEEMNLSAVYMQYEEDSYNHIMGLIEQYAAPLPPAIFLGLA 368
Query: 335 AKIYKRQ 341
KIYKR+
Sbjct: 369 QKIYKRK 375
>WB|WBGene00011058 [details] [associations]
symbol:fdps-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00723
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0000003
eggNOG:COG0142 GO:GO:0008299 HOGENOM:HOG000160912 KO:K00787
GeneTree:ENSGT00530000064127 HSSP:P08836 OMA:DIQENKC EMBL:Z81106
PIR:D87933 PIR:T23962 RefSeq:NP_493027.1 ProteinModelPortal:O62336
SMR:O62336 STRING:O62336 PaxDb:O62336 EnsemblMetazoa:R06C1.2
GeneID:173075 KEGG:cel:CELE_R06C1.2 UCSC:R06C1.2 CTD:173075
WormBase:R06C1.2 InParanoid:O62336 NextBio:878175 Uniprot:O62336
Length = 352
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 115/350 (32%), Positives = 187/350 (53%)
Query: 1 MSDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRML-DYNVPGGKLNRGLSVVDSYR 59
+ ++K +F+ V +L PA ++D Q+ R L D V GGK +R VD+ R
Sbjct: 12 LGEVKKKFVRVVAA---KL---PADGMEYDLVQYRCRNLFDNTVIGGKYSRASLCVDTIR 65
Query: 60 LLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAA 119
L+ E +E +Q+++L+ DDIMD S TRRG+PCWFR VGM A
Sbjct: 66 ALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDIMDNSETRRGKPCWFRREGVGMSAI 125
Query: 120 NDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYS 179
ND ++ + + IL+ L + + + + +T GQ +D + +S ++
Sbjct: 126 NDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSKQKTLIGQFLDTSSV----NQISSFT 181
Query: 180 LPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFG 239
+ +V+ KT++Y+ + P+ AL+++ + L H VK + Q+G FQ QDDFLD +G
Sbjct: 182 WDRYELMVENKTSHYTVFHPIQMALIIS-DVLAYHGSVKKVAYQIGFLFQSQDDFLDVYG 240
Query: 240 SPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKK----LVHE---NYGKVDPACVAKVKE 292
P++ GK+GTDI+D KC+WL V+AL+ ++ +K L+ E ++G VDP V K+K
Sbjct: 241 DPKITGKIGTDIQDGKCTWLAVRALQKMHKTPEKWGAKLIEEFKTSFGSVDPEKVEKIKR 300
Query: 293 LYKTLDLEGAFVEYEKESYEKLTKSIEAHPT--KEVQAVLKSFLAKIYKR 340
+Y L L+ F +EK ++ KSI P ++ VL F+ K+ R
Sbjct: 301 IYDELQLKQEFRRFEKHFSGEIKKSISEIPDVINPLRPVLDGFVTKLVNR 350
>UNIPROTKB|F1M2I4 [details] [associations]
symbol:F1M2I4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
IPI:IPI00565016 Ensembl:ENSRNOT00000040484 Uniprot:F1M2I4
Length = 281
Score = 265 (98.3 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 61/154 (39%), Positives = 91/154 (59%)
Query: 132 ILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKT 191
+LK R++PY ++LL+ +Q + Q +DLIT +G L Y+ ++ +V+ K
Sbjct: 122 LLKFCCREQPYSLNLLERCLRSCYQAETWQSVDLITAPQGHGHLGGYTEKRYKYVVKNKA 181
Query: 192 AYYSFYLPVACALLMAG-ENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTD 250
A F A+ MAG + ++H IL++MG +FQVQDD+LD F P V GKV TD
Sbjct: 182 ALL-FPPAYTAAVYMAGIDGEEEHANALKILLEMGEFFQVQDDYLDLFADPSVTGKVSTD 240
Query: 251 IEDYKCSWLVVKALELCNEEQKKLVHENYGKVDP 284
I+D KCSWLVV+ L Q+++ EN+G+ DP
Sbjct: 241 IQDNKCSWLVVQCL------QRQISEENFGQRDP 268
Score = 58 (25.5 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 41 YNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSAL--GWC 81
Y GGK + GL VV +++ L E ++ D L AL GWC
Sbjct: 38 YPGQGGKYSWGLMVVQAFQELVEPRK--QDAASLQPALTVGWC 78
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 59/257 (22%), Positives = 111/257 (43%)
Query: 82 IEWLQAYFLVLDDIMDGSHTRRGQPCWFRV-PKVGMIAANDGVLLRNHISRILKNHFRDK 140
IE++ L+ DD++D + RRG V + D + ++ + R
Sbjct: 71 IEFIHTATLLHDDVVDNATLRRGNASANEVWGNEASVLVGDFLFSKSFSLMVEAGDLR-- 128
Query: 141 PYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPV 200
+L + + A G+++ L+ T + E +Y +V+ KTA L
Sbjct: 129 -----ILKVISGATTIIAEGEVLQLLCTSDLEMTQERYI-----EVVKSKTAVL---LSA 175
Query: 201 AC--ALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCS 257
AC ++ + ++ ++D + +GI FQ+ DD LD S E GK +G D+E+ K +
Sbjct: 176 ACEAGAILGTSSAEQQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKIT 235
Query: 258 WLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKS 317
++ L C++E+++ + A V + KE+ + D E F K + T S
Sbjct: 236 LPLIHTLMKCSDEERETI---------AAVVE-KEILEPGDFESVFTLVHKYGGIEYTVS 285
Query: 318 IEAHPTKEVQAVLKSFL 334
+ +A L +F+
Sbjct: 286 VANEYIARCKAHLGAFV 302
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 131 (51.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 64/216 (29%), Positives = 102/216 (47%)
Query: 71 EFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRV-PKVGMIAANDGVLLRN 127
E L +A+G +E L Y L+ DD+ MD RRG+P +V + I A D LL
Sbjct: 64 EKLLPAAVG--VECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDA-LLTK 120
Query: 128 HISRILKNHFRDKPYYVDLLDLFNEVEFQTAS-----GQMIDLITTIEGEKDLSKYSLPL 182
K + P ++ + E+ + S GQ++DL ++ E +KD + L +
Sbjct: 121 AFELTAKTLEQGIPAE-RVVRVIQELAVASGSEGLIAGQVVDLSSS-EAKKD-PEVLLYI 177
Query: 183 HRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPE 242
H KTA Y +A +L AG ++ + D +G+ FQ+ DD LD G +
Sbjct: 178 HLN----KTARLIRYSLIAGGIL-AGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQ 232
Query: 243 VIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHE 277
IGK VG+D ++ K +++ + +E E KK E
Sbjct: 233 KIGKPVGSDEKNQKLTYVSLFGIE----ETKKRAEE 264
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 131 (51.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 64/216 (29%), Positives = 102/216 (47%)
Query: 71 EFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRV-PKVGMIAANDGVLLRN 127
E L +A+G +E L Y L+ DD+ MD RRG+P +V + I A D LL
Sbjct: 64 EKLLPAAVG--VECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDA-LLTK 120
Query: 128 HISRILKNHFRDKPYYVDLLDLFNEVEFQTAS-----GQMIDLITTIEGEKDLSKYSLPL 182
K + P ++ + E+ + S GQ++DL ++ E +KD + L +
Sbjct: 121 AFELTAKTLEQGIPAE-RVVRVIQELAVASGSEGLIAGQVVDLSSS-EAKKD-PEVLLYI 177
Query: 183 HRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPE 242
H KTA Y +A +L AG ++ + D +G+ FQ+ DD LD G +
Sbjct: 178 HLN----KTARLIRYSLIAGGIL-AGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQ 232
Query: 243 VIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHE 277
IGK VG+D ++ K +++ + +E E KK E
Sbjct: 233 KIGKPVGSDEKNQKLTYVSLFGIE----ETKKRAEE 264
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 130 (50.8 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 58/204 (28%), Positives = 91/204 (44%)
Query: 82 IEWLQAYFLVLDDI--MDGSHTRRGQP-CWFRVPKVGMIAANDGVLLRNHISRILKNHFR 138
+E + AY L+ DD+ MD RRG P C + + I A D L+ IL +
Sbjct: 73 VECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA--LQTLAFSILSD--A 128
Query: 139 DKPYYVDLLDLFNEV-EFQTASGQMIDLITTIEGEKDLSKYSLPLH--RRIVQYKTAYYS 195
D P D D + + E +ASG + + + D +PL RI ++KT
Sbjct: 129 DMPEVSDR-DRISMISELASASG-IAGMCGGQALDLDAEGKHVPLDALERIHRHKTGAL- 185
Query: 196 FYLPVACALLMAGENLDKHVEVKDILVQ-MGIYFQVQDDFLDCFGSPEVIGK-VGTDIED 253
V L AG+ + + V D + +G+ FQVQDD LD G +GK G D +
Sbjct: 186 IRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQL 245
Query: 254 YKCSWLVVKALELCNEEQKKLVHE 277
K ++ + LE ++ + L+ +
Sbjct: 246 GKSTYPALLGLEQARKKARDLIDD 269
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 130 (50.8 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 77 ALGWCIEWLQAYFLVLDDI--MDGSHTRRGQP-CWFRVPKVGMIAANDGV------LLRN 127
A+ +E + AY L+ DD+ MD RRG+P C + I A D + +L N
Sbjct: 68 AVAGALECIHAYSLLHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFDILAN 127
Query: 128 HISRILKNHFRDKPYYVDLLD-LFNEVEFQ-TASGQMIDLITTIEGEKDLSKYSLPLHRR 185
H + P V L+ L +Q GQ +DL T G K++S L +
Sbjct: 128 HTFS-MNQSTAGMPIQVKLIQQLVKASGYQGMCGGQALDLAAT--G-KNISLGELEVLHS 183
Query: 186 IVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIG 245
+ S +P C+ + E + + + +G+ +QVQDD +D + E +G
Sbjct: 184 LKTGALLEASVLMPAMCSGQVTREY---KIILSEYAQLIGLAYQVQDDIIDLTSTEEELG 240
Query: 246 K-VGTDIEDYKCSWLVVKALELCNEEQKKLVHE 277
K VG+DI K ++ + L+ ++ + L+ +
Sbjct: 241 KPVGSDIAANKSTYPALLGLQGAQDKAENLLQQ 273
>UNIPROTKB|O50410 [details] [associations]
symbol:idsB "Geranylgeranyl diphosphate synthase, type I"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 GO:GO:0005829 GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842582 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K13787 EMBL:CP003248 PIR:F70973
RefSeq:NP_217900.1 RefSeq:YP_006516867.1 ProteinModelPortal:O50410
SMR:O50410 EnsemblBacteria:EBMYCT00000000229 GeneID:13316985
GeneID:887680 KEGG:mtu:Rv3383c KEGG:mtv:RVBD_3383c PATRIC:18156138
TubercuList:Rv3383c OMA:DLISEHK ProtClustDB:CLSK792459
Uniprot:O50410
Length = 350
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 57/196 (29%), Positives = 90/196 (45%)
Query: 82 IEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKP 141
+E + + L+ DD+MDG TRRG+P + V VG +A G L RIL D+
Sbjct: 98 VELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVG-VAILLGDALHATAVRILTG-LTDEC 155
Query: 142 YYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVA 201
V + GQ D + +EG+ +++ + + R+ KTA +
Sbjct: 156 VAVRAIRRLQMSCLDLCIGQFEDCL--LEGQPEVT---VDDYLRMAAGKTAALT---GCC 207
Query: 202 CAL--LMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSW 258
CAL L+A + ++ ++G+ FQ DD + +G P V GK VG D+ K +
Sbjct: 208 CALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATL 267
Query: 259 LVVKALELCNEEQKKL 274
VV AL +E +L
Sbjct: 268 PVVAALNSRSEAATEL 283
>UNIPROTKB|Q3IPL1 [details] [associations]
symbol:idsA3 "Geranylfarnesyl diphosphate synthase"
species:348780 "Natronomonas pharaonis DSM 2160" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 HOGENOM:HOG000009101 KO:K13787 GO:GO:0044687
EMBL:CR936257 RefSeq:YP_327492.1 ProteinModelPortal:Q3IPL1
STRING:Q3IPL1 PRIDE:Q3IPL1 GeneID:3702862 GenomeReviews:CR936257_GR
KEGG:nph:NP3696A OMA:DIMDNDD ProtClustDB:CLSK511327
BioCyc:NPHA348780:GJX0-1875-MONOMER Uniprot:Q3IPL1
Length = 341
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 70/281 (24%), Positives = 129/281 (45%)
Query: 69 DDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGM-IAANDGVLLRN 127
D+ LS+A+ IE +Q++ L+ DDIMD RRG P R + I A D L +
Sbjct: 80 DEVDVLSAAVS--IEVIQSFTLIHDDIMDDDDLRRGVPAVHREYDLETAILAGD--TLYS 135
Query: 128 HISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIV 187
+ + V+ LD + GQ +D+ E D++ + +V
Sbjct: 136 KAFEYMLDTGAPAERSVEALDELATTCTEICEGQALDV--DFENRSDVTTEE---YLEMV 190
Query: 188 QYKTAYYSFYLPVAC--ALLMAGENLDKHVE-VKDILVQMGIYFQVQDDFLDCFGSPEVI 244
++KTA Y A A+L+ + D+ VE + + +G FQ+QDD LD + +
Sbjct: 191 EFKTAV--LYAAAASIPAILLGSD--DETVEALHGYGLDIGRAFQIQDDLLDLTAPSDEL 246
Query: 245 GKV-GTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAF 303
GK G+D+ + K + + + A + + + LV + DP+ A+++ +TL+ G+
Sbjct: 247 GKQRGSDLVENKRTVITLHARDQ-GIDVEGLVSD-----DPSD-AEIEAAVQTLEDAGS- 298
Query: 304 VEYEKESYEKLTKS----IEAHPTKEVQAVLKSFLAKIYKR 340
+++ +E L S ++ P E + +L+ + +R
Sbjct: 299 IDFAREMALDLVTSGKERLDVLPENEARQLLEDIADFLVER 339
>TIGR_CMR|SO_1526 [details] [associations]
symbol:SO_1526 "geranyltranstransferase" species:211586
"Shewanella oneidensis MR-1" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
OMA:MEFAHAV KO:K00795 RefSeq:NP_717143.1 ProteinModelPortal:Q8EGR8
GeneID:1169335 KEGG:son:SO_1526 PATRIC:23522694
ProtClustDB:CLSK906310 Uniprot:Q8EGR8
Length = 293
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 57/202 (28%), Positives = 86/202 (42%)
Query: 82 IEWLQAYFLVLDDI--MDGSHTRRGQPC-WFRVPKVGMIAANDGV-LLRNHISRILKNHF 137
IE + AY L+ DD+ MD RRGQP + I A D + L I
Sbjct: 72 IECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGI 131
Query: 138 RDKPYYVDLLDLFNEVEFQ-TASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSF 196
+ + + L ++ GQ IDL +T + DL K LH KT
Sbjct: 132 TSEQHIAMVRALAKASGYRGMCGGQAIDLAST-DKHIDL-KALTQLHNM----KTGAL-I 184
Query: 197 YLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKV-GTDIEDYK 255
V AL+ A D++ + + +G+ FQVQDD LD + E +GK G+D E K
Sbjct: 185 SCAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDAESNK 244
Query: 256 CSWLVVKALELCNEEQKKLVHE 277
++ + L+ + +L+ E
Sbjct: 245 STFPQLLGLQGAKDTATQLIQE 266
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 126 (49.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 59/260 (22%), Positives = 116/260 (44%)
Query: 82 IEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKP 141
IE++ L+ DD++D S RRG+ + N +L +
Sbjct: 81 IEFIHTASLLHDDVVDESTLRRGRET------ANALFGNSASVLVGDFLYTRSFQMMTEL 134
Query: 142 YYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVA 201
+ +L + + A G+++ L+ + D ++ S + R++ KTA F
Sbjct: 135 DSMRVLRVLADTTNVLAEGEVLQLMNC--NDPDTTEES---YMRVIYCKTAKL-FEAATL 188
Query: 202 CALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLV 260
A ++AG + ++ + D +G FQ+ DD LD + +GK +G D+ + K + +
Sbjct: 189 LAAVLAGASPEQETALGDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPL 248
Query: 261 VKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEA 320
+ A+ EE+K+L+ + + D ++++ L GA ++++ E+ K+I A
Sbjct: 249 IYAIAHGTEEEKQLIRQAIEQGDGTHA--IEKIVAALHHCGALNYTQQKAIEESNKAIAA 306
Query: 321 H---PTKEVQAVLKSFLAKI 337
P + + L S LAKI
Sbjct: 307 LSVLPDSDFKTALIS-LAKI 325
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 121 (47.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 86/326 (26%), Positives = 139/326 (42%)
Query: 15 LKQELLNDPAF--EFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEF 72
++QEL+ + + EF HD +L GGK R ++ LL +L D +F
Sbjct: 22 IEQELIKEVSERNEFLHDPAM---HLLK---AGGKRLR-----PAFALL--AAKLGDYDF 68
Query: 73 FLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIS-R 131
L +E + LV DD++D S RRG P + AN G + HI R
Sbjct: 69 EKVKPLAVALELIHMATLVHDDVVDNSMLRRGLPT---------VKANWGNKMSIHIGDR 119
Query: 132 ILKNHFR--D--KPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIV 187
I D K YV + EV + +G+ I + G K++S S+ + +
Sbjct: 120 IFAKSLLLIDSCKNNYV--AKVLAEVSVKMTTGE----IQQLNGAKNIST-SIKDYLIKI 172
Query: 188 QYKTAYYSFYLPVACALLMAGENLDKHV--EVKDILVQMGIYFQVQDDFLDCFGSPEVIG 245
+ KTA L +C L N+ V +K + +G+ FQ+ DD LD +V+G
Sbjct: 173 KRKTA---LLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLG 229
Query: 246 K-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFV 304
K VG+D+ + V+ AL+ +++ +L E P A ++++ K + G
Sbjct: 230 KPVGSDLRQGLITLPVLLALK--RDKKHELWRELQNL--PQNNANIEQIIKEIKYLGGIS 285
Query: 305 E---YEKESYEKLTKSIEAHPTKEVQ 327
E + K EK + E P V+
Sbjct: 286 EAYAWAKNYIEKAISAFELVPKSPVK 311
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 121 (47.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 86/326 (26%), Positives = 139/326 (42%)
Query: 15 LKQELLNDPAF--EFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEF 72
++QEL+ + + EF HD +L GGK R ++ LL +L D +F
Sbjct: 22 IEQELIKEVSERNEFLHDPAM---HLLK---AGGKRLR-----PAFALL--AAKLGDYDF 68
Query: 73 FLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIS-R 131
L +E + LV DD++D S RRG P + AN G + HI R
Sbjct: 69 EKVKPLAVALELIHMATLVHDDVVDNSMLRRGLPT---------VKANWGNKMSIHIGDR 119
Query: 132 ILKNHFR--D--KPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIV 187
I D K YV + EV + +G+ I + G K++S S+ + +
Sbjct: 120 IFAKSLLLIDSCKNNYV--AKVLAEVSVKMTTGE----IQQLNGAKNIST-SIKDYLIKI 172
Query: 188 QYKTAYYSFYLPVACALLMAGENLDKHV--EVKDILVQMGIYFQVQDDFLDCFGSPEVIG 245
+ KTA L +C L N+ V +K + +G+ FQ+ DD LD +V+G
Sbjct: 173 KRKTA---LLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLG 229
Query: 246 K-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFV 304
K VG+D+ + V+ AL+ +++ +L E P A ++++ K + G
Sbjct: 230 KPVGSDLRQGLITLPVLLALK--RDKKHELWRELQNL--PQNNANIEQIIKEIKYLGGIS 285
Query: 305 E---YEKESYEKLTKSIEAHPTKEVQ 327
E + K EK + E P V+
Sbjct: 286 EAYAWAKNYIEKAISAFELVPKSPVK 311
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 54/202 (26%), Positives = 89/202 (44%)
Query: 82 IEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRD 139
+E + L+ DD+ MD RRG+P +V G+ + G LL +
Sbjct: 153 VEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISS 212
Query: 140 KPYYVDLLDLFNEVEFQ-TASGQMIDLITTIEGEKDLSKYSLPLHRRIVQ-YKTAYYSFY 197
+ + +L + + +GQ +D+ + EG DL++ L H + +KTA
Sbjct: 213 ERMVWAVRELARSIGTRGLVAGQAMDISS--EG-LDLNEVGLE-HLEFIHVHKTAVLLET 268
Query: 198 LPVACALLMAGENLDKHVE-VKDILVQMGIYFQVQDDFLDCFGSPEVIGKV-GTDIEDYK 255
V A++ G D+ +E V+ +G+ FQV DD LD S E +GK G D K
Sbjct: 269 AAVLGAIIGGGS--DEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGK 326
Query: 256 CSWLVVKALELCNEEQKKLVHE 277
++ + LE E K+L +
Sbjct: 327 LTYPKLIGLEKSKEFVKRLTKD 348
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 59/266 (22%), Positives = 108/266 (40%)
Query: 82 IEWLQAYFLVLDDIMDGSHTRRGQPCWFRV-PKVGMIAANDGVLLRNHISRILKNHFRDK 140
+E++ L+ DD++D S RRG+P + + D + R+ + R
Sbjct: 81 VEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLR-- 138
Query: 141 PYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTA-YYSFYLP 199
+LD+ A G+++ + + D S Y ++V+ KTA +S
Sbjct: 139 -----VLDILANAAATIAEGEVLQMTAASDLRTDESVYL-----QVVRGKTAALFSAATE 188
Query: 200 VACALLMAGENLDKHV-EVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCS 257
V + E + + E D L GI FQ+ DD LD G + GK VG D + K +
Sbjct: 189 VGGVIAGVPEAQVRALFEYGDAL---GIAFQIADDLLDYQGDAKATGKNVGDDFRERKLT 245
Query: 258 WLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESY---EKL 314
V+KA+ +E++ K A +++ ++ G +++ EK
Sbjct: 246 LPVIKAVAQATDEERAFWVRTIEKGKQA-EGDLEQALALMEKYGTLAATRADAHAWAEKA 304
Query: 315 TKSIEAHPTKEVQAVLKSFLAKIYKR 340
++E P E++ +L + R
Sbjct: 305 RTALELLPNHEIRTMLSDLADYVVAR 330
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 59/266 (22%), Positives = 108/266 (40%)
Query: 82 IEWLQAYFLVLDDIMDGSHTRRGQPCWFRV-PKVGMIAANDGVLLRNHISRILKNHFRDK 140
+E++ L+ DD++D S RRG+P + + D + R+ + R
Sbjct: 81 VEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLR-- 138
Query: 141 PYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTA-YYSFYLP 199
+LD+ A G+++ + + D S Y ++V+ KTA +S
Sbjct: 139 -----VLDILANAAATIAEGEVLQMTAASDLRTDESVYL-----QVVRGKTAALFSAATE 188
Query: 200 VACALLMAGENLDKHV-EVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCS 257
V + E + + E D L GI FQ+ DD LD G + GK VG D + K +
Sbjct: 189 VGGVIAGVPEAQVRALFEYGDAL---GIAFQIADDLLDYQGDAKATGKNVGDDFRERKLT 245
Query: 258 WLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESY---EKL 314
V+KA+ +E++ K A +++ ++ G +++ EK
Sbjct: 246 LPVIKAVAQATDEERAFWVRTIEKGKQA-EGDLEQALALMEKYGTLAATRADAHAWAEKA 304
Query: 315 TKSIEAHPTKEVQAVLKSFLAKIYKR 340
++E P E++ +L + R
Sbjct: 305 RTALELLPNHEIRTMLSDLADYVVAR 330
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 66/256 (25%), Positives = 116/256 (45%)
Query: 35 VDRMLDYNV-PGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLD 93
V + + Y + PGGK R + + + L+ G+E T + +A +E + A L+LD
Sbjct: 67 VHKAMRYTLLPGGKRVRPMLCLVACELVG-GQESTA----MPAACA--VEMIHAASLILD 119
Query: 94 DI--MDGSHTRRGQPCWFRV--PKVGMIAAND--GVLLRNHISRILKNHFRDKPYYVDLL 147
D+ MD RRG+P +V K ++A+N + ++ ++ ++ +
Sbjct: 120 DLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSERVLRA-VQ 178
Query: 148 DLFNEVEFQ-TASGQMIDLI---TTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACA 203
++ V + +GQ DL + + E D +Y +H +KTA V A
Sbjct: 179 EMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMH----VHKTAVLVEAAAVVGA 234
Query: 204 LLMAGENLDKHVE-VKDILVQMGIYFQVQDDFLDCFGSPEVIGKV-GTDIEDYKCSWLVV 261
++ G D+ +E +K +G+ FQV DD LD S E +GK G D+ K ++ V
Sbjct: 235 IMGGGS--DEEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKV 292
Query: 262 KALELCNEEQKKLVHE 277
++ E K+L E
Sbjct: 293 MGVDNAREYAKRLNRE 308
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 117 (46.2 bits), Expect = 0.00022, P = 0.00022
Identities = 71/283 (25%), Positives = 118/283 (41%)
Query: 9 IEVYGVLKQEL-LNDPAFE----FDHDSRQWVDRMLDYNV-PGGKLNRGLSVVDSYRLLK 62
+++ G LK+ L D A E + + V R + Y+V GGK R + L+
Sbjct: 1 MDLKGYLKERCALVDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPI-------LML 53
Query: 63 EGKELTDDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRV-PKVGMIAA 119
+ + L+ +E + Y L+ DD+ MD RRG+P +V + I A
Sbjct: 54 AACDAVGGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILA 113
Query: 120 NDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTAS-----GQMIDLITTIEGEKD 174
D +L I I + LL + +E+ S GQ++D+ + EG K+
Sbjct: 114 GDALLTEAFIL-ISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMES--EGNKE 170
Query: 175 LSKYSLP-LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDD 233
+ ++ +H R KT + ++ G N D V +G+ FQ+ DD
Sbjct: 171 IDLATVQYIHTR----KTGAL-IKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADD 225
Query: 234 FLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLV 275
LD G+ E IGK G+D K ++ V L ++L+
Sbjct: 226 ILDIEGTTEQIGKDAGSDEARGKATYPAVLGLAESKRRAQELL 268
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 117 (46.2 bits), Expect = 0.00022, P = 0.00022
Identities = 71/283 (25%), Positives = 118/283 (41%)
Query: 9 IEVYGVLKQEL-LNDPAFE----FDHDSRQWVDRMLDYNV-PGGKLNRGLSVVDSYRLLK 62
+++ G LK+ L D A E + + V R + Y+V GGK R + L+
Sbjct: 1 MDLKGYLKERCALVDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPI-------LML 53
Query: 63 EGKELTDDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRV-PKVGMIAA 119
+ + L+ +E + Y L+ DD+ MD RRG+P +V + I A
Sbjct: 54 AACDAVGGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILA 113
Query: 120 NDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTAS-----GQMIDLITTIEGEKD 174
D +L I I + LL + +E+ S GQ++D+ + EG K+
Sbjct: 114 GDALLTEAFIL-ISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMES--EGNKE 170
Query: 175 LSKYSLP-LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDD 233
+ ++ +H R KT + ++ G N D V +G+ FQ+ DD
Sbjct: 171 IDLATVQYIHTR----KTGAL-IKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADD 225
Query: 234 FLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLV 275
LD G+ E IGK G+D K ++ V L ++L+
Sbjct: 226 ILDIEGTTEQIGKDAGSDEARGKATYPAVLGLAESKRRAQELL 268
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 60/219 (27%), Positives = 96/219 (43%)
Query: 66 ELTDDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRV--PKVGMIAAND 121
EL + + + IE L A L+LDD+ MD RRG+P V + ++A+
Sbjct: 103 ELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQ- 161
Query: 122 GVLLRNHISRILKNHFRDKP---YYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKY 178
L+ + + + F D P + ++ VE A GQ DL EG + S
Sbjct: 162 -ALIALAVQKTTSSTFADVPPERILKTVQEMVKAVEGLVA-GQQADLAG--EGMRFDSDT 217
Query: 179 SLPLHRRIVQ-YKTAYYSFYLPVACALLMAGENLDKHVE-VKDILVQMGIYFQVQDDFLD 236
L H + +KTA V A++ G D+ +E ++ +G+ FQV DD LD
Sbjct: 218 GLE-HLEFIHIHKTAALLEAAAVMGAIMGGGS--DEEIERLRSYARCIGLMFQVVDDVLD 274
Query: 237 CFGSPEVIGKV-GTDIEDYKCSWLVVKALELCNEEQKKL 274
S E +GK G D+ K ++ + +E E ++L
Sbjct: 275 VTKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKEYAERL 313
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 74/283 (26%), Positives = 125/283 (44%)
Query: 21 NDPAFEFD-HDSR--QWVDRMLDYNVPGGKLNRGLSVVDS--YRLLKEGK---------- 65
N+ AF+F + R + V+ LD +VP L + L++ ++ Y LL GK
Sbjct: 60 NNSAFDFKLYMIRKAESVNAALDVSVP---LLKPLTIQEAVRYSLLAGGKRVRPLLCIAA 116
Query: 66 -ELTDDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGM-IAAND 121
EL + + + +E + L+ DD+ MD + RRG+P +V M + A D
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176
Query: 122 GVLLR--NHISRILKNHFRDKPYYVDLLDLFNEVEFQ-TASGQMIDLITTIEGEKDLSKY 178
+L H++ + + +++L + +GQMIDL + + K
Sbjct: 177 ALLALAFEHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASE---RLNPDKV 233
Query: 179 SLPLHRRIVQ-YKTAYYSFYLPVACAL-LMAGENLDKHVE-VKDILVQMGIYFQVQDDFL 235
L H + +KTA L A L ++ G ++ +E ++ +G+ FQV DD L
Sbjct: 234 GLE-HLEFIHLHKTAAL---LEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDIL 289
Query: 236 DCFGSPEVIGKV-GTDIEDYKCSWLVVKALELCNEEQKKLVHE 277
D S E +GK G D+ K ++ + LE E +KL E
Sbjct: 290 DVTKSTEELGKTAGKDVMAGKLTYPRLIGLEGSREVAEKLRRE 332
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 53/223 (23%), Positives = 100/223 (44%)
Query: 69 DDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGM-IAANDGVLL 125
D E L +E + Y LV DD+ MD RRG+P +V M + A DG+L
Sbjct: 61 DKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLL- 119
Query: 126 RNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMID-LITTIEGE-KDLSKYSLPLH 183
+ +++ + + + + L E+ M+ + +E E K L+ L
Sbjct: 120 -TYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEY- 177
Query: 184 RRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEV 243
I ++KT + +A ++L ++ ++ + +G+ FQ++DD LD G+ E
Sbjct: 178 --IHKHKTGKLLEFAVLAGSILSDATE-EQEEKLLEFAKYIGLAFQIRDDILDVEGTEEE 234
Query: 244 IGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPA 285
IGK +G+D+ + K ++ + ++ K ++ E K A
Sbjct: 235 IGKPIGSDVSNEKSTYTTLFTVD----RAKDILDETIAKAKDA 273
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 53/223 (23%), Positives = 100/223 (44%)
Query: 69 DDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGM-IAANDGVLL 125
D E L +E + Y LV DD+ MD RRG+P +V M + A DG+L
Sbjct: 61 DKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLL- 119
Query: 126 RNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMID-LITTIEGE-KDLSKYSLPLH 183
+ +++ + + + + L E+ M+ + +E E K L+ L
Sbjct: 120 -TYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEY- 177
Query: 184 RRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEV 243
I ++KT + +A ++L ++ ++ + +G+ FQ++DD LD G+ E
Sbjct: 178 --IHKHKTGKLLEFAVLAGSILSDATE-EQEEKLLEFAKYIGLAFQIRDDILDVEGTEEE 234
Query: 244 IGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPA 285
IGK +G+D+ + K ++ + ++ K ++ E K A
Sbjct: 235 IGKPIGSDVSNEKSTYTTLFTVD----RAKDILDETIAKAKDA 273
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 59/233 (25%), Positives = 103/233 (44%)
Query: 45 GGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRG 104
GGK R L + + R+L G E L+++ IE + L+ DDIMD RRG
Sbjct: 29 GGKRLRPLITLLTARMLG-GLEAEARAIPLAAS----IETAHTFSLIHDDIMDRDEVRRG 83
Query: 105 QPCWFRVPKVGMIAANDGVLLRN---HIS--RILKNH-----FRDKPYYVDLLDLFNEVE 154
VP ++ +D +L H + +++ + ++ Y + +E
Sbjct: 84 ------VPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRA--FKVLSEAA 135
Query: 155 FQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKT-AYYSFYLPVACALLMAGENLDK 213
Q + GQ D++ + D++ Y +V+ KT A + AG ++K
Sbjct: 136 IQISRGQAYDMLFEETWDVDVADYL-----NMVRLKTGALIEAAARIGAVAAGAGSEIEK 190
Query: 214 HVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALE 265
+ ++ + GI FQ++DD L G P+V GK V D+ K + LV+ A++
Sbjct: 191 MMG--EVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAVK 241
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 114 (45.2 bits), Expect = 0.00059, P = 0.00059
Identities = 45/197 (22%), Positives = 86/197 (43%)
Query: 82 IEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKP 141
IE++ L+ DD++D S+ RRG+ + N +L K
Sbjct: 77 IEFIHTATLLHDDVVDESNMRRGRET------ANALFGNSASVLVGDFLYTRSFQMMTKL 130
Query: 142 YYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVA 201
+ ++D+ +E A G+++ L+ + Y +++ KTA F
Sbjct: 131 GDMRIMDILSEATNIVAEGEVLQLMNCNDASTTEESYM-----QVIYCKTAKL-FEAATR 184
Query: 202 CALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLV 260
A ++A ++ + D +G FQ+ DD +D + +GK VG D+ + K + +
Sbjct: 185 LAAVIAKQDAKIEQAMADYGKYLGTAFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPL 244
Query: 261 VKALELCNEEQKKLVHE 277
+ A++ NE Q+KL+ E
Sbjct: 245 LYAMKHGNEAQQKLIKE 261
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 112 (44.5 bits), Expect = 0.00081, P = 0.00081
Identities = 64/239 (26%), Positives = 97/239 (40%)
Query: 45 GGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTR 102
GGK R V + ++L G EL+D + S+ +E + AY L+ DD+ MD R
Sbjct: 41 GGKRARPYLVYITGQML--GCELSDLDTPASA-----VECIHAYSLIHDDLPAMDDDELR 93
Query: 103 RGQP-CWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEV-EFQTASG 160
RG+P C + + I D L+ IL + + + E A G
Sbjct: 94 RGKPTCHIQFDEATAILTGDA--LQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQG 151
Query: 161 QMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 220
+ + E L SL I + KT + L AGE + D
Sbjct: 152 MCLGQALDLAAENRL--ISLEELETIHRNKTGAL-MRCAIRLGALAAGEKGRAMLPHLDR 208
Query: 221 LVQ-MGIYFQVQDDFLDCFGSPEVIGKV-GTDIEDYKCSWLVVKALELCNEEQKKLVHE 277
+ +G+ FQVQDD LD E +GK G+D E K ++ + LE ++ L+ E
Sbjct: 209 YAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQE 267
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 112 (44.5 bits), Expect = 0.00081, P = 0.00081
Identities = 64/239 (26%), Positives = 97/239 (40%)
Query: 45 GGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTR 102
GGK R V + ++L G EL+D + S+ +E + AY L+ DD+ MD R
Sbjct: 41 GGKRARPYLVYITGQML--GCELSDLDTPASA-----VECIHAYSLIHDDLPAMDDDELR 93
Query: 103 RGQP-CWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEV-EFQTASG 160
RG+P C + + I D L+ IL + + + E A G
Sbjct: 94 RGKPTCHIQFDEATAILTGDA--LQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQG 151
Query: 161 QMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 220
+ + E L SL I + KT + L AGE + D
Sbjct: 152 MCLGQALDLAAENRL--ISLEELETIHRNKTGAL-MRCAIRLGALAAGEKGRAMLPHLDR 208
Query: 221 LVQ-MGIYFQVQDDFLDCFGSPEVIGKV-GTDIEDYKCSWLVVKALELCNEEQKKLVHE 277
+ +G+ FQVQDD LD E +GK G+D E K ++ + LE ++ L+ E
Sbjct: 209 YAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQE 267
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 342 342 0.00096 116 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 608 (65 KB)
Total size of DFA: 247 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.02u 0.11s 28.13t Elapsed: 00:00:01
Total cpu time: 28.03u 0.11s 28.14t Elapsed: 00:00:01
Start: Sat May 11 10:40:34 2013 End: Sat May 11 10:40:35 2013