BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019339
(342 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49351|FPPS1_LUPAL Farnesyl pyrophosphate synthase 1 OS=Lupinus albus GN=FPS1 PE=2
SV=1
Length = 342
Score = 600 bits (1546), Expect = e-171, Method: Compositional matrix adjust.
Identities = 282/342 (82%), Positives = 309/342 (90%)
Query: 1 MSDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRL 60
M+DL+S F+ VY VLK ELL+DPAFEF DSRQW+DRMLDYNVPGGKLNRGLSV+DSYRL
Sbjct: 1 MADLRSTFLNVYSVLKSELLHDPAFEFSPDSRQWLDRMLDYNVPGGKLNRGLSVIDSYRL 60
Query: 61 LKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAN 120
LK+G EL DDE FL+SALGWCIEWLQAYFLVLDDIMD SHTRRGQPCWFRVPKVGMIAAN
Sbjct: 61 LKDGHELNDDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAAN 120
Query: 121 DGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSL 180
DGVLLRNHI RILK HFR KPYY DLLDLFNEVEFQTASGQMIDLITT+EGEKDLSKY+L
Sbjct: 121 DGVLLRNHIPRILKKHFRGKPYYADLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTL 180
Query: 181 PLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGS 240
LHRRIVQYKTAYYSFYLPVACALLM GENLD H++VK+ILV MG YFQVQDD+LDCFG+
Sbjct: 181 SLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHIDVKNILVDMGTYFQVQDDYLDCFGA 240
Query: 241 PEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLE 300
PE IGK+GTDIED+KCSWLVVKALEL N+EQKK++++NYGK DPA VAKVK LY L+L+
Sbjct: 241 PETIGKIGTDIEDFKCSWLVVKALELSNDEQKKVLYDNYGKPDPANVAKVKALYDELNLQ 300
Query: 301 GAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
G F EYE +SYEKL SIEAHP+K VQA+LKSFL KIYKRQK
Sbjct: 301 GVFTEYESKSYEKLVTSIEAHPSKAVQALLKSFLGKIYKRQK 342
>sp|O64905|FPPS_HELAN Farnesyl pyrophosphate synthase OS=Helianthus annuus GN=FPS1 PE=2
SV=1
Length = 341
Score = 592 bits (1525), Expect = e-168, Method: Compositional matrix adjust.
Identities = 281/341 (82%), Positives = 310/341 (90%), Gaps = 2/341 (0%)
Query: 2 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL 61
SDLKS+F+ VY LK ELLNDPAFEF HDSRQW+D+MLDYNVPGGKLNRGLSVVDSY+LL
Sbjct: 3 SDLKSKFLHVYQTLKSELLNDPAFEFHHDSRQWIDKMLDYNVPGGKLNRGLSVVDSYQLL 62
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
K G ELTDDE FL+SALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFR+PKVGMIAAND
Sbjct: 63 K-GAELTDDEIFLASALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRLPKVGMIAAND 121
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
G++LRNH+ RILK HFR KPYYVDL+DLFNEVEFQTASGQMIDLITT+ GEKDLSKYSL
Sbjct: 122 GLILRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLS 181
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSP 241
+HRRIVQYKTAYYSFYLPVACALLM GE+LD HVEVK++LV+MG YFQVQDD+LDCFG+P
Sbjct: 182 IHRRIVQYKTAYYSFYLPVACALLMFGEDLDNHVEVKNVLVEMGTYFQVQDDYLDCFGAP 241
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
EVIGK+GTDIED+ SWLVVKALEL NEEQKK++HENYGK DP+ VAKVKELY TL+L+G
Sbjct: 242 EVIGKIGTDIEDF-SSWLVVKALELANEEQKKVLHENYGKKDPSSVAKVKELYNTLNLQG 300
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F +YE SY+KL SIE HP+K VQAVLKSFL KIYKRQK
Sbjct: 301 VFEDYESTSYKKLITSIEGHPSKAVQAVLKSFLGKIYKRQK 341
>sp|P49350|FPPS_ARTAN Farnesyl pyrophosphate synthase OS=Artemisia annua GN=FPS1 PE=2
SV=1
Length = 343
Score = 591 bits (1523), Expect = e-168, Method: Compositional matrix adjust.
Identities = 280/341 (82%), Positives = 311/341 (91%), Gaps = 1/341 (0%)
Query: 2 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL 61
+DLKS+F++VY LK EL+NDPAFEFD DSRQW+++MLDYNVPGGKLNRGLSVVDSY+LL
Sbjct: 4 TDLKSKFLKVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVVDSYQLL 63
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
K G EL+DDE FLSSALGWCIEWLQAYFLVLDDIMD SHTRRGQPCWFR+PKVGMIAAND
Sbjct: 64 K-GGELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAAND 122
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
G+LLRNH+ RILK HFR KPYYVDL+DLFNEVEFQTASGQMIDLITT+ GEKDLSKYSL
Sbjct: 123 GILLRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLS 182
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSP 241
+HRRIVQYKTAYYSFYLPVACALLM GE+LDKHVEVK++LV+MG YFQVQDD+LDCFG+P
Sbjct: 183 IHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDCFGAP 242
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
EVIGK+GTDIED+KCSWLVVKALEL NEEQKK +HENYGK DPA VAKVKE+Y TL+L+
Sbjct: 243 EVIGKIGTDIEDFKCSWLVVKALELPNEEQKKTLHENYGKKDPASVAKVKEVYHTLNLQA 302
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F +YE SY+KL SIE HP+K VQAVLKSFL KIYKRQK
Sbjct: 303 VFEDYEATSYKKLITSIENHPSKAVQAVLKSFLGKIYKRQK 343
>sp|Q7XYS9|FPPS1_ARTSI Farnesyl diphosphate synthase 1 OS=Artemisia spiciformis GN=FDS-1
PE=1 SV=1
Length = 346
Score = 590 bits (1520), Expect = e-168, Method: Compositional matrix adjust.
Identities = 279/340 (82%), Positives = 309/340 (90%), Gaps = 1/340 (0%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLK 62
DLKS+F++VY LK +L+NDPAFEFD DSRQW+ +MLDYNVPGGKLNRGLSVVDSY+LLK
Sbjct: 8 DLKSKFLKVYDTLKSDLINDPAFEFDDDSRQWIQKMLDYNVPGGKLNRGLSVVDSYQLLK 67
Query: 63 EGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDG 122
G EL+DDE FLSSALGWCIEWLQAYFLVLDDIMD SHTRRGQPCWFR+PKVGMIAANDG
Sbjct: 68 -GGELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDG 126
Query: 123 VLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPL 182
+LLRNH+ RILK HFR KPYYVDL+DLFNEVEFQTASGQMIDLITT+ GEKDLSKYSL +
Sbjct: 127 ILLRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSI 186
Query: 183 HRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPE 242
HRRIVQYKTAYYSFYLPVACALLM GE+LDKHVEVK++LV+MG YFQVQDD+LDCFG+PE
Sbjct: 187 HRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDCFGAPE 246
Query: 243 VIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGA 302
VIGK+GTDIED+KCSWLVVKALEL NEEQKK +HENYGK DPA VAKVKE+Y TL+L+
Sbjct: 247 VIGKIGTDIEDFKCSWLVVKALELANEEQKKTLHENYGKKDPASVAKVKEVYHTLNLQAV 306
Query: 303 FVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F +YE SY+KL SIE HP+K VQAVLKSFL KIYKRQK
Sbjct: 307 FEDYEATSYKKLITSIENHPSKAVQAVLKSFLGKIYKRQK 346
>sp|O24241|FPPS1_PARAR Farnesyl pyrophosphate synthase 1 OS=Parthenium argentatum GN=FPS1
PE=2 SV=1
Length = 342
Score = 589 bits (1519), Expect = e-168, Method: Compositional matrix adjust.
Identities = 278/341 (81%), Positives = 312/341 (91%), Gaps = 1/341 (0%)
Query: 2 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL 61
SDLKSRF++VY LK EL+NDPAFEFD DSRQWV++MLDYNVPGGKLNRGLSV+DSY+LL
Sbjct: 3 SDLKSRFLQVYDTLKSELINDPAFEFDDDSRQWVEKMLDYNVPGGKLNRGLSVIDSYQLL 62
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
K G ELTD+E FL++ALGWCIEWLQAYFLVLDDIMD SHTRRGQPCWFR+PKVGMIAAND
Sbjct: 63 K-GGELTDNEIFLAAALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAAND 121
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
G++LRN++ RILK HFR KPYYVDLLDLFNEVEFQTASGQMIDLITT+ GEKDLSKYSL
Sbjct: 122 GIILRNNVPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLS 181
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSP 241
+HRRIVQYKTAYYSFYLPVACALLM GE+L+KH EVK++LV+MG YFQVQDD+LDCFG+P
Sbjct: 182 IHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHEEVKNVLVEMGTYFQVQDDYLDCFGAP 241
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
EVIGK+GTDIED+KCSWLVVKALEL NEEQKK++HENYGK DP+ VAKVKELY TL+L+G
Sbjct: 242 EVIGKIGTDIEDFKCSWLVVKALELSNEEQKKILHENYGKKDPSSVAKVKELYHTLNLQG 301
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F +YE SY+KL SIE HP+K VQAVLKSFL KIYKRQK
Sbjct: 302 VFEDYENTSYKKLITSIEGHPSKAVQAVLKSFLGKIYKRQK 342
>sp|P49352|FPPS2_LUPAL Farnesyl pyrophosphate synthase 2 OS=Lupinus albus GN=FPS2 PE=2
SV=1
Length = 342
Score = 589 bits (1518), Expect = e-167, Method: Compositional matrix adjust.
Identities = 277/342 (80%), Positives = 305/342 (89%)
Query: 1 MSDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRL 60
M+D KS F+ VY +LK ELL DPAFEF DSRQWV+RMLDYNVPGGKLNRGLSV+DSY+L
Sbjct: 1 MADPKSSFLNVYSILKSELLQDPAFEFSTDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
Query: 61 LKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAN 120
LK+G+EL D+E FL+SALGWCIEWLQAYFLVLDDIMD SHTRRG PCWFRVPKVGMIA N
Sbjct: 61 LKDGQELNDEEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGHPCWFRVPKVGMIAPN 120
Query: 121 DGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSL 180
DGV+LRNHI RILK HFR KPYYVDLLDLFNEVEFQTASGQMIDLITT+EGEKDLSKY+L
Sbjct: 121 DGVVLRNHIPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTL 180
Query: 181 PLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGS 240
LHRRIVQYKTAYYSFYLPVACALLM GENLD H +VK+ILV+MG YFQVQDD+LDCFG+
Sbjct: 181 SLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHTDVKNILVEMGTYFQVQDDYLDCFGA 240
Query: 241 PEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLE 300
PE IGK+GTDIED+KCSWLVVKALEL NEEQKK+++ENYGK DPA VAKVK LY L+LE
Sbjct: 241 PETIGKIGTDIEDFKCSWLVVKALELSNEEQKKVLYENYGKPDPANVAKVKTLYNELNLE 300
Query: 301 GAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
GA+ +YE +SYEKL IE HP+K VQ VLKSF AKIYKRQK
Sbjct: 301 GAYADYESKSYEKLVTCIEGHPSKAVQGVLKSFWAKIYKRQK 342
>sp|O24242|FPPS2_PARAR Farnesyl pyrophosphate synthase 2 OS=Parthenium argentatum GN=FPS2
PE=2 SV=1
Length = 342
Score = 586 bits (1511), Expect = e-167, Method: Compositional matrix adjust.
Identities = 273/341 (80%), Positives = 312/341 (91%), Gaps = 1/341 (0%)
Query: 2 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL 61
+D++S+F++VY LK EL+NDPAFEFD DSRQW+++MLDYNVPGGKLNRGLSV+DSY+LL
Sbjct: 3 TDIRSKFLQVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVIDSYQLL 62
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
K GK LTDDE F +SALGWC+EWLQAYFLVLDDIMD SHTRRGQPCWFR+PKVGMIAAND
Sbjct: 63 KGGK-LTDDEIFHASALGWCVEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAAND 121
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
G++LRNH+ RILK HFR KPYYVDL+DLFNEVEFQTASGQMIDLITT+ GEKDLSKYSL
Sbjct: 122 GIILRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLS 181
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSP 241
+HRRIVQYKTAYYSFYLPVACALLM GE+L+KHVEVK++LV+MG YFQVQDD+LDCFG+P
Sbjct: 182 IHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHVEVKNVLVEMGTYFQVQDDYLDCFGAP 241
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
EVIGK+GTDIED+KCSWLVVKALEL NEEQKK++HENYGK DP+ VAKVKELY TL+L+G
Sbjct: 242 EVIGKIGTDIEDFKCSWLVVKALELANEEQKKVLHENYGKKDPSPVAKVKELYNTLNLQG 301
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F +YE SY+KL SIE HP+K VQAVLKSFL KIY+RQK
Sbjct: 302 VFEDYENTSYKKLITSIEGHPSKAVQAVLKSFLGKIYRRQK 342
>sp|Q43315|FPPS2_ARATH Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana GN=FPS2
PE=2 SV=1
Length = 342
Score = 578 bits (1490), Expect = e-164, Method: Compositional matrix adjust.
Identities = 272/342 (79%), Positives = 307/342 (89%)
Query: 1 MSDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRL 60
M+DLKS F++VY VLK +LL DP+FEF H+SRQW++RMLDYNV GGKLNRGLSVVDSY+L
Sbjct: 1 MADLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKL 60
Query: 61 LKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAN 120
LK+G++LT+ E FLS ALGWCIEWLQAYFLVLDDIMD S TRRGQPCWFR PKVGMIA N
Sbjct: 61 LKQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAIN 120
Query: 121 DGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSL 180
DG+LLRNHI RILK HFR+ PYYVDL+DLFNEVEFQTA GQMIDLITT +GEKDLSKYSL
Sbjct: 121 DGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMIDLITTFDGEKDLSKYSL 180
Query: 181 PLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGS 240
+HRRIV+YKTAYYSFYLPVACALLMAGENL+ H +VK +LV MGIYFQVQDD+LDCF
Sbjct: 181 QIHRRIVEYKTAYYSFYLPVACALLMAGENLENHTDVKTVLVDMGIYFQVQDDYLDCFAD 240
Query: 241 PEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLE 300
PE +GK+GTDIED+KCSWLVVKALE C+EEQ K+++ENYGK +P+ VAKVK LYK LDLE
Sbjct: 241 PETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKAEPSNVAKVKALYKELDLE 300
Query: 301 GAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
GAF+EYEKESYEKLTK IEAH +K +QAVLKSFLAKIYKRQK
Sbjct: 301 GAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFLAKIYKRQK 342
>sp|Q09152|FPPS1_ARATH Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis
thaliana GN=FPS1 PE=2 SV=2
Length = 384
Score = 572 bits (1473), Expect = e-162, Method: Compositional matrix adjust.
Identities = 267/341 (78%), Positives = 305/341 (89%)
Query: 2 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL 61
+DLKS F+ VY VLK +LL+DP+FEF ++SR WVDRMLDYNV GGKLNRGLSVVDS++LL
Sbjct: 44 TDLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFKLL 103
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
K+G +LT+ E FLS ALGWCIEWLQAYFLVLDDIMD S TRRGQPCWFRVP+VGM+A ND
Sbjct: 104 KQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAIND 163
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
G+LLRNHI RILK HFRDKPYYVDL+DLFNEVE QTA GQMIDLITT EGEKDL+KYSL
Sbjct: 164 GILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMIDLITTFEGEKDLAKYSLS 223
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSP 241
+HRRIVQYKTAYYSFYLPVACALLMAGENL+ H++VK++LV MGIYFQVQDD+LDCF P
Sbjct: 224 IHRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADP 283
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
E +GK+GTDIED+KCSWLVVKALE C+EEQ K+++ENYGK DP+ VAKVK+LYK LDLEG
Sbjct: 284 ETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKPDPSNVAKVKDLYKELDLEG 343
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F+EYE +SYEKLT +IE H +K +QAVLKSFLAKIYKRQK
Sbjct: 344 VFMEYESKSYEKLTGAIEGHQSKAIQAVLKSFLAKIYKRQK 384
>sp|Q7XYT0|FPPS2_ARTSI Farnesyl diphosphate synthase 2 OS=Artemisia spiciformis GN=FDS-2
PE=1 SV=1
Length = 342
Score = 567 bits (1462), Expect = e-161, Method: Compositional matrix adjust.
Identities = 269/340 (79%), Positives = 307/340 (90%), Gaps = 1/340 (0%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLK 62
DLKSRF++VY LK +L++DPAFEFD DSR WV+RMLDYNVPGGKLNRGLSVVDSY+LLK
Sbjct: 4 DLKSRFLQVYDSLKSDLIHDPAFEFDDDSRNWVERMLDYNVPGGKLNRGLSVVDSYKLLK 63
Query: 63 EGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDG 122
+ +ELT+DE FL+ ALGWCIEWLQAYFLVLDDIMD SHTRRGQPCWFR+PKVGMIA NDG
Sbjct: 64 Q-EELTEDEVFLACALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAVNDG 122
Query: 123 VLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPL 182
V+LRNHI RILK HFR K YY DLLDLFNEVEFQTASGQMIDLITT+ G+K+LSKYSL
Sbjct: 123 VVLRNHIPRILKKHFRGKAYYADLLDLFNEVEFQTASGQMIDLITTLFGQKELSKYSLST 182
Query: 183 HRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPE 242
H+RIV++KTAYYSFYLPVACALLM GENLD HV+VKD+LV+MG YFQVQDD+LDCFGSPE
Sbjct: 183 HQRIVKFKTAYYSFYLPVACALLMFGENLDDHVQVKDVLVEMGTYFQVQDDYLDCFGSPE 242
Query: 243 VIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGA 302
VIGK+GTDIED+KCSWLVVKALEL +E+QKKL++ENYG+ DPA VAKVKELY TL+L+G
Sbjct: 243 VIGKIGTDIEDFKCSWLVVKALELADEQQKKLLNENYGRKDPASVAKVKELYHTLNLQGV 302
Query: 303 FVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F +YE +S+EK+ KSIE HP+K VQ VLKSFL KI+KRQK
Sbjct: 303 FEDYENKSHEKIIKSIETHPSKAVQEVLKSFLGKIFKRQK 342
>sp|P49353|FPPS_MAIZE Farnesyl pyrophosphate synthase OS=Zea mays GN=FPS PE=2 SV=1
Length = 350
Score = 531 bits (1367), Expect = e-150, Method: Compositional matrix adjust.
Identities = 248/340 (72%), Positives = 290/340 (85%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLK 62
D ++ F +Y LK+ELL DPAFEF +SRQW+DRM+DYNV GGK NRGLSVVDSY+LLK
Sbjct: 11 DTRAAFARIYKTLKEELLTDPAFEFTEESRQWIDRMVDYNVLGGKCNRGLSVVDSYKLLK 70
Query: 63 EGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDG 122
L ++E FL+ LGWCIEWLQA+FLVLDDIMD SHTRRGQPCWFRVP+VG+IAANDG
Sbjct: 71 GADALGEEETFLACTLGWCIEWLQAFFLVLDDIMDDSHTRRGQPCWFRVPQVGLIAANDG 130
Query: 123 VLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPL 182
++LRNHISRIL+ HF+ KPYY DLLDLFNEVEF+TASGQ++DLITT EGEKDL+KY++ +
Sbjct: 131 IILRNHISRILRRHFKGKPYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNITV 190
Query: 183 HRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPE 242
H RIVQYKTAYYSFYLPVACALL++GENLD + +V++ILV+MG YFQVQDD+LDC+G PE
Sbjct: 191 HGRIVQYKTAYYSFYLPVACALLLSGENLDNYGDVENILVEMGTYFQVQDDYLDCYGDPE 250
Query: 243 VIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGA 302
IGK+GTDIEDYKCSWLVV+ALE +E QK+++ ENYGK DPACVAKVK LYK LDLE
Sbjct: 251 FIGKIGTDIEDYKCSWLVVQALERADESQKRILFENYGKKDPACVAKVKNLYKELDLEAV 310
Query: 303 FVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F EYE ESY+KL IEA P+ VQ VLKSFL KIYKRQK
Sbjct: 311 FQEYENESYKKLIADIEAQPSIAVQKVLKSFLHKIYKRQK 350
>sp|P0C565|CPPAS_TANCI Chrysanthemyl diphosphate synthase, chloroplastic OS=Tanacetum
cinerariifolium PE=1 SV=1
Length = 395
Score = 499 bits (1286), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/341 (69%), Positives = 285/341 (83%), Gaps = 1/341 (0%)
Query: 2 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL 61
S+L S+F++VY LK EL++DP+FEFD DSRQWV+RM+DYNVPGGK+ RG SVVDSY+LL
Sbjct: 56 SNLDSQFMQVYETLKSELIHDPSFEFDDDSRQWVERMIDYNVPGGKMVRGYSVVDSYQLL 115
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
K G+ELT+DE FL+ ALGWC EWLQA+ LVLDDIMDGSHTRRGQPCWFR+P+VG++A ND
Sbjct: 116 K-GEELTEDEAFLACALGWCTEWLQAFILVLDDIMDGSHTRRGQPCWFRLPEVGVVAIND 174
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
GVLLRNH+ RILK +F+ KPYYV LLDLFNE EFQT SGQMID I + G+KDLSKY++
Sbjct: 175 GVLLRNHVHRILKKYFQGKPYYVHLLDLFNETEFQTISGQMIDTICRLAGQKDLSKYTMT 234
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSP 241
L+RRIVQYK +YYS YLP+ACALLM GENL+ HV+VKDILV++G+Y+Q+Q+D+LD FG P
Sbjct: 235 LNRRIVQYKGSYYSCYLPIACALLMFGENLEDHVQVKDILVELGMYYQIQNDYLDTFGDP 294
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
+V GK GTDIE+ KCSWL+ KALEL NEEQKK++ ENYG DP+ VAKVKELY LDL+G
Sbjct: 295 DVFGKTGTDIEECKCSWLIAKALELANEEQKKILSENYGINDPSKVAKVKELYHALDLKG 354
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
A+ +YE YE SI+AHP VQAVLKS L K+YK K
Sbjct: 355 AYEDYETNLYETSMTSIKAHPNIAVQAVLKSCLEKMYKGHK 395
>sp|Q7XYS8|CHRDS_ARTSI Monoterpene synthase FDS-5, chloroplastic OS=Artemisia spiciformis
GN=FDS-5 PE=1 SV=1
Length = 394
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 229/341 (67%), Positives = 281/341 (82%), Gaps = 1/341 (0%)
Query: 2 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL 61
S+L S+F++VY LK EL++DP FEFD DSRQWV+RM+DY VPGGK+ RG SVVDSY+LL
Sbjct: 55 SNLNSQFMQVYETLKSELIHDPLFEFDDDSRQWVERMIDYTVPGGKMVRGYSVVDSYQLL 114
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
K G+ELT++E FL+ ALGWC EW QA+ L+ DD+MDGSHTRRGQPCWFR+P+VG +A ND
Sbjct: 115 K-GEELTEEEAFLACALGWCTEWFQAFILLHDDMMDGSHTRRGQPCWFRLPEVGAVAIND 173
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
GVLLRNH+ RILK HF+ K YYV L+DLFNE EFQT SGQMID I+ + G+K+LSKYS+
Sbjct: 174 GVLLRNHVHRILKKHFQGKAYYVHLVDLFNETEFQTISGQMIDTISRLAGQKELSKYSMS 233
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSP 241
L+RRIVQYK AYYS YLP+ACALLM GENLD +V+VKDILV++G+Y+Q+Q+D+LD FG P
Sbjct: 234 LNRRIVQYKGAYYSCYLPIACALLMFGENLDDYVQVKDILVELGMYYQIQNDYLDTFGDP 293
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
V GK GTDIE+ KCSWL+ KALEL NEEQKK++ ENYG DPA VAKVKE+Y L+L+G
Sbjct: 294 NVFGKTGTDIEECKCSWLIAKALELANEEQKKILSENYGIKDPAKVAKVKEIYHALNLKG 353
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
A+ +YE YE K+I+AHP+ VQAVLKS L K+YK K
Sbjct: 354 AYEDYETNLYENSMKAIKAHPSIAVQAVLKSCLEKMYKGHK 394
>sp|P08524|FPPS_YEAST Farnesyl pyrophosphate synthase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ERG20 PE=1 SV=2
Length = 352
Score = 338 bits (867), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/344 (50%), Positives = 241/344 (70%), Gaps = 6/344 (1%)
Query: 5 KSRFIEVYGVLKQEL-LNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL-- 61
+ RF+ V+ L +EL + A+ ++ W L+YN PGGKLNRGLSVVD+Y +L
Sbjct: 9 RERFLNVFPKLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSN 68
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
K ++L +E+ + LGWCIE LQAYFLV DD+MD S TRRGQPCW++VP+VG IA ND
Sbjct: 69 KTVEQLGQEEYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAIND 128
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
+L I ++LK+HFR++ YY+D+ +LF+EV FQT GQ++DLIT E + DLSK+SL
Sbjct: 129 AFMLEAAIYKLLKSHFRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLK 188
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV-EVKDILVQMGIYFQVQDDFLDCFGS 240
H IV +KTAYYSFYLPVA A+ +AG +K + + +D+L+ +G YFQ+QDD+LDCFG+
Sbjct: 189 KHSFIVTFKTAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDCFGT 248
Query: 241 PEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLE 300
PE IGK+GTDI+D KCSW++ KALEL + EQ+K + ENYGK D AK K+++ L +E
Sbjct: 249 PEQIGKIGTDIQDNKCSWVINKALELASAEQRKTLDENYGKKDSVAEAKCKKIFNDLKIE 308
Query: 301 GAFVEYEKESYEKLTKSI-EAHPTKEVQA-VLKSFLAKIYKRQK 342
+ EYE+ + L I + ++ +A VL +FL K+YKR K
Sbjct: 309 QLYHEYEESIAKDLKAKISQVDESRGFKADVLTAFLNKVYKRSK 352
>sp|Q9NH03|FPS_DICDI Farnesyl diphosphate synthase OS=Dictyostelium discoideum GN=fps
PE=2 SV=1
Length = 382
Score = 329 bits (843), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/345 (48%), Positives = 231/345 (66%), Gaps = 17/345 (4%)
Query: 8 FIEVYGVLKQELLND-PAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKE 66
F+E++ +L E+L + P + + WV++M++ NV GGK+NRGL+V+ S +LL EG++
Sbjct: 41 FVEIFPILTNEILKELPGMDMPPQTIAWVEKMINVNVSGGKMNRGLTVLHSLQLLVEGRQ 100
Query: 67 LTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPK-------VGMIAA 119
L+ E FL++ LGWC+EWLQA+FLV DDIMD S TRRGQPCW+R +G IA
Sbjct: 101 LSRSEIFLANVLGWCVEWLQAFFLVADDIMDQSITRRGQPCWYRQANPISNNGTIGSIAI 160
Query: 120 NDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYS 179
ND +L + I ++K +FR++PYY D+LD+F+E +QT GQ++DL TT D S ++
Sbjct: 161 NDSFILESCIYILIKKYFRNEPYYADILDIFHETSYQTELGQLLDL-TTQPNRGDFSLFT 219
Query: 180 LPLHRRIVQYKTAYYSFYLPVACALLMAG-ENLDKHVEVKDILVQMGIYFQVQDDFLDCF 238
L +RRIV+YKTAYYSFYLPVA A+LMAG + KDIL+ MG +FQVQDDFLDC+
Sbjct: 220 LNTYRRIVKYKTAYYSFYLPVALAMLMAGITSTPAFSTAKDILLPMGEFFQVQDDFLDCY 279
Query: 239 GSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLD 298
GSP VIGK+G DIE+ KCSW++ +A+ EQ L+ ++YG +P V VK++Y +
Sbjct: 280 GSPAVIGKIGRDIEENKCSWMICQAILNGTPEQINLLKKHYGLDNPTDVELVKKIYGEIG 339
Query: 299 LEGAFVEYEKESYEKL---TKSIEAHPTKEVQAVLKSFLAKIYKR 340
L+ F +YE ESY L KS+ P Q V L+KIYKR
Sbjct: 340 LKKIFKDYEDESYAFLISKIKSVRIMP----QEVFIKLLSKIYKR 380
>sp|P49349|FPPS_KLULA Farnesyl pyrophosphate synthase OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=FPS1 PE=3 SV=1
Length = 349
Score = 328 bits (842), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/349 (50%), Positives = 239/349 (68%), Gaps = 7/349 (2%)
Query: 1 MSDLKSRFIEVYGVLKQELLNDPA-FEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYR 59
MSD +++F+EV+ L QEL + A + ++ +W ++ L+YN PGGKLNRGLSVVD+Y
Sbjct: 1 MSDNRAQFLEVFPSLVQELRDILAGYGMPEEAIEWYEKSLNYNTPGGKLNRGLSVVDTYA 60
Query: 60 LLKEGK---ELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGM 116
LLK K EL+ +E+ + LGWCIE LQAYFLV DD+MD S TRRGQPCW++V VG
Sbjct: 61 LLKGYKSVSELSAEEYKKVAILGWCIELLQAYFLVADDMMDQSITRRGQPCWYKVENVGD 120
Query: 117 IAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLS 176
IA ND +L I +LK HFR +PYYVDLL+LF++V FQT GQ++DLIT E + DLS
Sbjct: 121 IAINDAFMLEGAIYCLLKKHFRTEPYYVDLLELFHDVTFQTELGQLLDLITAPEDKVDLS 180
Query: 177 KYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV-EVKDILVQMGIYFQVQDDFL 235
K+SL H IV +KTAYYSFYL VA A+ AG K + + D+L+ +G YFQ+QDDFL
Sbjct: 181 KFSLEKHSFIVIFKTAYYSFYLAVALAMFAAGITDSKDLKQASDVLIPLGEYFQIQDDFL 240
Query: 236 DCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYK 295
DCFG PE IGK+GTDI+D KCSW++ AL+ +EQ+ ++ ENYG+ D K + ++
Sbjct: 241 DCFGKPEDIGKIGTDIQDNKCSWVINVALKNATKEQRDILDENYGRKDSEKEQKCRAVFN 300
Query: 296 TLDLEGAFVEYEKESYEKLTKSI-EAHPTKEVQA-VLKSFLAKIYKRQK 342
L+++ + +YE+E+ L + I ++ +A VL FL KIY R+K
Sbjct: 301 ELNIQDIYHKYEEETASNLREKIANIDESRGFKAEVLTLFLNKIYHRKK 349
>sp|P08836|FPPS_CHICK Farnesyl pyrophosphate synthase OS=Gallus gallus GN=FDPS PE=1 SV=2
Length = 367
Score = 317 bits (812), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 156/314 (49%), Positives = 213/314 (67%), Gaps = 1/314 (0%)
Query: 30 DSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYF 89
D+ + +L YN PGGK NRGL+VV +YR L + + + A+GWCIE QA+F
Sbjct: 54 DAVARLKEVLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELFQAFF 113
Query: 90 LVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDL 149
LV DDIMD S TRRGQ CW++ VG+ A ND LL + + R+LK + R +PYYV LL+L
Sbjct: 114 LVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVHLLEL 173
Query: 150 FNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAG- 208
F + +QT GQM+DLIT + DLS +S ++ IV+YKTA+YSFYLPVA A+ M G
Sbjct: 174 FLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGI 233
Query: 209 ENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCN 268
++ ++H K IL++MG YFQ+QDD+LDCFG P + GKVGTDI+D KCSWLVV+ L+
Sbjct: 234 DSKEEHENAKAILLEMGEYFQIQDDYLDCFGDPALTGKVGTDIQDNKCSWLVVQCLQRVT 293
Query: 269 EEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQA 328
EQ++L+ +NYG+ +P VAKVKELY+ + + AF +YE+ SY +L + IE H + +
Sbjct: 294 PEQRQLLEDNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSYRRLQELIEKHSNRLPKE 353
Query: 329 VLKSFLAKIYKRQK 342
+ KIYKRQK
Sbjct: 354 IFLGLAQKIYKRQK 367
>sp|P05369|FPPS_RAT Farnesyl pyrophosphate synthase OS=Rattus norvegicus GN=Fdps PE=2
SV=2
Length = 353
Score = 310 bits (793), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 224/336 (66%), Gaps = 4/336 (1%)
Query: 8 FIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKEL 67
F ++ VL ++ L P D+ + +L+YN GGK NRGL+VV +++ L E ++
Sbjct: 21 FSQIVKVLTEDELGHPE---KGDAITRIKEVLEYNTVGGKYNRGLTVVQTFQELVEPRKQ 77
Query: 68 TDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRN 127
+ + +GWC+E LQA+FLVLDDIMD S+TRRGQ CW++ P +G+ A ND +LL
Sbjct: 78 DAESLQRALTVGWCVELLQAFFLVLDDIMDSSYTRRGQICWYQKPGIGLDAINDALLLEA 137
Query: 128 HISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIV 187
I R+LK + R++PYY++LL+LF + +QT GQ +DLIT +G+ DL +Y+ ++ IV
Sbjct: 138 AIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLITAPQGQVDLGRYTEKRYKSIV 197
Query: 188 QYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK 246
+YKTA+YSFYLP+A A+ MAG + +K H IL++MG +FQ+QDD+LD FG P V GK
Sbjct: 198 KYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEMGEFFQIQDDYLDLFGDPSVTGK 257
Query: 247 VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEY 306
VGTDI+D KCSWLVV+ L +Q++++ ENYG+ DP VA+VK LY+ LDL F +Y
Sbjct: 258 VGTDIQDNKCSWLVVQCLLRATPQQRQILEENYGQKDPEKVARVKALYEELDLRSVFFKY 317
Query: 307 EKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
E++SY +L IE ++ KIYKR+K
Sbjct: 318 EEDSYNRLKSLIEQCSAPLPPSIFLELANKIYKRRK 353
>sp|Q920E5|FPPS_MOUSE Farnesyl pyrophosphate synthase OS=Mus musculus GN=Fdps PE=2 SV=1
Length = 353
Score = 309 bits (791), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 224/336 (66%), Gaps = 4/336 (1%)
Query: 8 FIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKEL 67
F ++ VL ++ L P D+ + +L+YN GGK NRGL+VV +++ L E K+
Sbjct: 21 FSQIVKVLTEKELGHPEI---GDAIARLKEVLEYNALGGKYNRGLTVVQAFQELVEPKKQ 77
Query: 68 TDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRN 127
+ + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A ND +LL
Sbjct: 78 DAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAINDALLLEA 137
Query: 128 HISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIV 187
I R+LK + R++PYY++LL+LF + +QT GQ +DL+T +G DL +Y+ ++ IV
Sbjct: 138 SIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLMTAPQGHVDLGRYTEKRYKSIV 197
Query: 188 QYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK 246
+YKTA+YSFYLP+A A+ MAG + +K H IL++MG +FQVQDD+LD FG P V GK
Sbjct: 198 KYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMGEFFQVQDDYLDLFGDPSVTGK 257
Query: 247 VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEY 306
VGTDI+D KCSWLVV+ L + +Q++++ ENYG+ DP VA+VK LY+ LDL+ AF +Y
Sbjct: 258 VGTDIQDNKCSWLVVQCLLRASPQQRQILEENYGQKDPEKVARVKALYEALDLQSAFFKY 317
Query: 307 EKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
E++SY +L IE ++ KIYKR+K
Sbjct: 318 EEDSYNRLKSLIEQCSAPLPPSIFMELANKIYKRRK 353
>sp|Q8WMY2|FPPS_BOVIN Farnesyl pyrophosphate synthase OS=Bos taurus GN=FDPS PE=1 SV=1
Length = 353
Score = 306 bits (784), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/341 (44%), Positives = 224/341 (65%), Gaps = 4/341 (1%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLK 62
D F ++ VL +E + P D+ + +L+YN GGK NRGL+VV ++R L
Sbjct: 16 DFIQHFSQIVKVLTEEDIGHPEI---GDAITRLKEVLEYNAIGGKYNRGLTVVITFRELV 72
Query: 63 EGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDG 122
E + D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A ND
Sbjct: 73 EPGKQDPDSLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQTCWYQKPGIGLDAINDA 132
Query: 123 VLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPL 182
LL + I R+LK + R++PYY+DL++LF + +QT GQ +DLIT +G DL +++
Sbjct: 133 FLLESSIYRLLKLYCREQPYYLDLIELFLQSSYQTEIGQTLDLITAPQGNVDLGRFTEKR 192
Query: 183 HRRIVQYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGSP 241
++ IV+YKTA+YSFYLPVA A+ MAG + +K H K IL++MG +FQ+QDD+LD FG P
Sbjct: 193 YKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHAHAKKILLEMGEFFQIQDDYLDLFGDP 252
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
+ GK+GTDI+D KCSWLVV+ L+ + EQ++++ ENYG+ + VA+VK LY+ ++L
Sbjct: 253 SMTGKIGTDIQDNKCSWLVVQCLQRASPEQRQILQENYGQKEAEKVARVKALYEEMNLSA 312
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
+++YE++SY + IE + A+ KIYKR+K
Sbjct: 313 VYMQYEEDSYNHIMGLIEQYAAPLPPAIFLGLAQKIYKRKK 353
>sp|Q92250|FPPS_NEUCR Farnesyl pyrophosphate synthase OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=fpp PE=3 SV=2
Length = 347
Score = 305 bits (781), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/342 (48%), Positives = 222/342 (64%), Gaps = 11/342 (3%)
Query: 8 FIEVYGVLKQELLN-DPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKE 66
F V+ L++ LL A++ W + L+ N GGK NRG+SV DS +L G+
Sbjct: 10 FESVFPKLEEALLEYAKAYKLPEQMLSWYKQSLEVNTLGGKCNRGMSVPDSASILL-GRP 68
Query: 67 LTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLR 126
LT++E+F ++ LGW E LQA+FLV DDIMD S TRRG+PCW+R VGM+A ND +L
Sbjct: 69 LTEEEYFQAATLGWMTELLQAFFLVSDDIMDSSITRRGKPCWYRQEGVGMVAINDAFMLE 128
Query: 127 NHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRI 186
+ I +LK +FR P YVD L+LF+EV FQT GQ+ DL+T E + DL +S+ + I
Sbjct: 129 SAIYTLLKKYFRSHPRYVDFLELFHEVTFQTEMGQLCDLLTAPEDKVDLDNFSMDKYTFI 188
Query: 187 VQYKTAYYSFYLPVACALLM----AGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPE 242
V YKTAYYSFYLPVA A+ M ENL + +DIL+ +G YFQVQDD+LD FG PE
Sbjct: 189 VIYKTAYYSFYLPVALAMYMLDIATPENLK---QAEDILIPLGEYFQVQDDYLDNFGLPE 245
Query: 243 VIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGA 302
IGK+GTDI+D KCSWLV KAL + EQ+K + ENYG+ D A A +K+LY L LE
Sbjct: 246 HIGKIGTDIQDNKCSWLVNKALSIVTPEQRKTLEENYGRKDKAKEAVIKQLYDDLKLEDH 305
Query: 303 FVEYEKESYEKLTKSIEAHPTKE--VQAVLKSFLAKIYKRQK 342
+ +YE+E ++ K I+A + + V ++FL KIYKR K
Sbjct: 306 YKQYEEERVGEIRKMIDAIDESKGLKKQVFEAFLGKIYKRSK 347
>sp|P14324|FPPS_HUMAN Farnesyl pyrophosphate synthase OS=Homo sapiens GN=FDPS PE=1 SV=4
Length = 419
Score = 301 bits (770), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 154/341 (45%), Positives = 222/341 (65%), Gaps = 4/341 (1%)
Query: 3 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLK 62
D F ++ VL ++ + P D+ + +L+YN GGK NRGL+VV ++R L
Sbjct: 82 DFVQHFSQIVRVLTEDEMGHPEI---GDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELV 138
Query: 63 EGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDG 122
E ++ D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P VG+ A ND
Sbjct: 139 EPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDA 198
Query: 123 VLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPL 182
LL I R+LK + R++PYY++L++LF + +QT GQ +DL+T +G DL +++
Sbjct: 199 NLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKR 258
Query: 183 HRRIVQYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGSP 241
++ IV+YKTA+YSFYLP+A A+ MAG + +K H K IL++MG +FQ+QDD+LD FG P
Sbjct: 259 YKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDP 318
Query: 242 EVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEG 301
V GK+GTDI+D KCSWLVV+ L+ EQ +++ ENYG+ + VA+VK LY+ LDL
Sbjct: 319 SVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPA 378
Query: 302 AFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
F++YE++SY + IE + AV KIYKR+K
Sbjct: 379 VFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKRRK 419
>sp|O14230|FPPS_SCHPO Farnesyl pyrophosphate synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=fps1 PE=1 SV=1
Length = 347
Score = 298 bits (764), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 154/344 (44%), Positives = 219/344 (63%), Gaps = 5/344 (1%)
Query: 3 DLKSRFIEVYGVLKQELLND-PAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL 61
D +++F V E++N D +W L +N GGK NRGLSV+DSY +L
Sbjct: 5 DKRAKFESALPVFVDEIVNYLKTINIPDDVTEWYKNSLFHNTLGGKYNRGLSVIDSYEIL 64
Query: 62 KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAAND 121
G L + + ++ LGW +E LQ++FL+ DDIMD S TRRGQPCW+ +P VG IA ND
Sbjct: 65 L-GHPLDEAAYMKAAVLGWMVELLQSFFLIADDIMDASKTRRGQPCWYLMPGVGNIAIND 123
Query: 122 GVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 181
++ + I +LK HFR + YVDL++LF++V FQT GQ +DL+T E DLSK+SL
Sbjct: 124 AFMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQTELGQQLDLLTAPEDSVDLSKFSLQ 183
Query: 182 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVE-VKDILVQMGIYFQVQDDFLDCFGS 240
H IV YKTA+YSFYLPVA A+ +AG ++++ +DIL+ +G YFQVQDD+LDC+G
Sbjct: 184 KHSFIVIYKTAFYSFYLPVALAMHLAGVATPENLKCAQDILIILGKYFQVQDDYLDCYGD 243
Query: 241 PEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLE 300
P V GK+GTDI D KCSW++ AL C EQ+ ++ +NYG+ D +VK +++ L++
Sbjct: 244 PTVTGKIGTDILDNKCSWIINLALAKCTPEQRVILDDNYGRKDSESEKRVKAVFEELNIR 303
Query: 301 GAFVEYEKESYEKLTKSIEA--HPTKEVQAVLKSFLAKIYKRQK 342
G F YE+ ++ K I+ T +++ +FL KIYKR K
Sbjct: 304 GEFENYEESEVSEIKKLIDGVDESTGLKKSIFTTFLGKIYKRNK 347
>sp|Q92235|FPPS_GIBFU Farnesyl pyrophosphate synthase OS=Gibberella fujikuroi GN=FPPS
PE=3 SV=1
Length = 347
Score = 296 bits (758), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/342 (47%), Positives = 220/342 (64%), Gaps = 11/342 (3%)
Query: 8 FIEVYGVLKQELLNDP-AFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKE 66
F VY L++ LL+ +++ + W R L+ N GGK NRG+SV DS LL E K
Sbjct: 10 FNSVYPKLEEALLDHARSYKLPQEQLDWYKRSLEVNPLGGKCNRGMSVPDSVSLLLE-KP 68
Query: 67 LTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLR 126
LT++++F ++ LGW E LQA+FLV DDIMD S TRRGQPCW+R VGMIA ND +L
Sbjct: 69 LTEEQYFQAATLGWMTELLQAFFLVSDDIMDSSITRRGQPCWYRQEGVGMIAINDAFMLE 128
Query: 127 NHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRI 186
+ I +LK +FR P Y DL++ F+E FQT GQ+ DL+T E +L +SL + I
Sbjct: 129 SAIYTLLKKYFRSHPAYFDLIESFHETTFQTELGQLCDLLTAPEDNVNLDNFSLEKYSFI 188
Query: 187 VQYKTAYYSFYLPVACAL----LMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPE 242
V YKTAYYSFYLPVA AL L NL + +DIL+ +G YFQ+QDD+LD FG PE
Sbjct: 189 VIYKTAYYSFYLPVALALHQLNLATPSNLK---QAEDILIPLGEYFQIQDDYLDNFGKPE 245
Query: 243 VIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGA 302
IGK+GTDI+D KCSWLV +AL + EQ+K++ ENYG+ D VK+LY L+LE
Sbjct: 246 HIGKIGTDIKDNKCSWLVNQALAVATPEQRKILEENYGRKDDEKEKVVKKLYDDLNLEQR 305
Query: 303 FVEYEKESYEKLTKSIEAHPTKE--VQAVLKSFLAKIYKRQK 342
+++YE++ ++ + I + + V ++FLAKIYKR K
Sbjct: 306 YLDYEEKVVGQIRERIANIDENDGLKKTVFEAFLAKIYKRSK 347
>sp|Q54XP1|Y8823_DICDI Probable farnesyl diphosphate synthase DDB_G0278823
OS=Dictyostelium discoideum GN=DDB_G0278823 PE=3 SV=1
Length = 356
Score = 281 bits (719), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 218/344 (63%), Gaps = 11/344 (3%)
Query: 8 FIEVYGVLKQELLND-PAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKE 66
F ++ +L E+ + +F +S W++ ++ N GGK+NRG+SV++S L EG+
Sbjct: 15 FANLFPILLNEIKKELEKIDFPKESIHWIETVIKANSTGGKMNRGISVLESLESLNEGRA 74
Query: 67 LTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPK------VGMIAAN 120
LT E F + LGWC+E QA +LV DDIMD S RRG+PCW++ + VG+ A N
Sbjct: 75 LTRHEIFQAQTLGWCVEIFQACYLVSDDIMDQSLKRRGKPCWYKQKRPNSDQEVGLAAIN 134
Query: 121 DGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLIT-TIEGEKDLSKYS 179
D ++ + + +L+ +F+++ YY+++++LF++ FQT GQ++DL T I G D S +
Sbjct: 135 DSFIIESCVFILLEKYFKNESYYLNIVELFHKTGFQTQLGQLLDLTTQPIRG--DFSSIN 192
Query: 180 LPLHRRIVQYKTAYYSFYLPVACALLMAGENLDK-HVEVKDILVQMGIYFQVQDDFLDCF 238
L H RI +YKTAYYSF+ PVA A+LM+ N ++ KDIL+ MG+YFQVQDDFLDC+
Sbjct: 193 LKNHTRITEYKTAYYSFFFPVALAMLMSKINHEQAFTTAKDILLPMGVYFQVQDDFLDCY 252
Query: 239 GSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLD 298
GSPEV GK+G DIE+ KCSW++ +A+ +Q L+ ++YG +P V VK++YK ++
Sbjct: 253 GSPEVFGKIGRDIEENKCSWMICQAILNGTPDQINLLKKHYGFDNPTDVEIVKKIYKEIN 312
Query: 299 LEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKRQK 342
LE F +YE SY L I+ +V L+KIYKR K
Sbjct: 313 LEKIFKDYENTSYNFLIDKIKTTCIYLPPSVFLKILSKIYKRDK 356
>sp|O59703|GGPPS_SCHPO Geranylgeranyl pyrophosphate synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spo9 PE=1 SV=1
Length = 351
Score = 226 bits (575), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 181/304 (59%), Gaps = 5/304 (1%)
Query: 42 NVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHT 101
N GGK NRGL+V+ S L +EL + EF ++ LGW IE LQ FL+ DDIMD S
Sbjct: 50 NTLGGKNNRGLAVLQSLTSLI-NRELEEAEFRDAALLGWLIEILQGCFLMADDIMDQSIK 108
Query: 102 RRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQ 161
RRG CW+ V V A N+ LL I +++ +FR+ PYYVDLLD F EV F T GQ
Sbjct: 109 RRGLDCWYLVVGVRR-AINESQLLEACIPLLIRKYFRNMPYYVDLLDTFREVTFLTELGQ 167
Query: 162 MIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDIL 221
DL+++ +GE L + L + I+ YKT++YSFYLP+ CALL++ + K + L
Sbjct: 168 QEDLLSSRDGEASLRSFDLMKYDFIITYKTSFYSFYLPIKCALLLSRNSNQKAYDTTIKL 227
Query: 222 VQM-GIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYG 280
++ G YFQVQDD+LDCFG V+GKVG DI+D KC+WLV A + + +Q L+ +YG
Sbjct: 228 SKLLGYYFQVQDDYLDCFGDYTVLGKVGMDIQDNKCTWLVCYAEKFASADQLNLLRAHYG 287
Query: 281 KVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEA--HPTKEVQAVLKSFLAKIY 338
K +A +K+LY L + + ++E + + ++K I+ T + + F IY
Sbjct: 288 KAGSENIAVIKQLYHELQIPELYHKFEDDMVDSISKEIDLIDESTGLKKCIFTKFFQLIY 347
Query: 339 KRQK 342
KR +
Sbjct: 348 KRSR 351
>sp|Q55EU7|Y8742_DICDI Probable farnesyl diphosphate synthase DDB_G0268742
OS=Dictyostelium discoideum GN=DDB_G0268742 PE=3 SV=1
Length = 393
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 199/360 (55%), Gaps = 49/360 (13%)
Query: 5 KSRFIEVYGVLKQELLND-PAFEFDHDSRQWVDRMLDY-NVPGGKLNRGLSVVDSYRLLK 62
+ FI+VY +LK ++ ++ P + ++ ++ +L+ + GGK+ RGL + S L
Sbjct: 13 REEFIKVYSILKNDVFDELPKMKLASNAIDYIKELLNSPTITGGKMYRGLGFLYSLNTLL 72
Query: 63 EGK---------------ELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPC 107
K E + E + +GWC+E+L ++FL+ DDIMD TRRG+ C
Sbjct: 73 IAKNNFDNNNNNNNNKNSETSQHE---ARIIGWCLEFL-SFFLITDDIMDNGLTRRGELC 128
Query: 108 WFRVP--------KVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTAS 159
W+R P KVGM+A ND VL+ + + ILK +F++K YYVDL +LF+E F TA+
Sbjct: 129 WYRHPSPFNPTEHKVGMLAINDSVLIESFLFFILKKYFKNKSYYVDLFELFHESIFYTAT 188
Query: 160 GQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAG--ENLDKHVE- 216
GQ++D + D + ++ + +I K++++ FYL + A+L+ +N +K +
Sbjct: 189 GQLLDSSSFHLKRGDFTNFTFENYSQICINKSSHHVFYLQIKIAILLTDIMDNNEKQKDD 248
Query: 217 -----------------VKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWL 259
+K+I +GIY Q QDD+ DCFG P+VIGK GTDI++ KCSWL
Sbjct: 249 TTCKEEKDKEKEQEEELIKNICFNLGIYGQAQDDYFDCFGDPKVIGKTGTDIQENKCSWL 308
Query: 260 VVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIE 319
+ KA +CN +Q + +NYG + V+ VK ++K +++ + +E E Y + K I+
Sbjct: 309 ICKANTICNNDQLNQLKKNYGNDNENDVSIVKSIFKEINIPKHYENFENEQYNSILKEIQ 368
>sp|P39464|GGPS_SULAC Geranylgeranyl diphosphate synthase OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=gds PE=1 SV=1
Length = 330
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 79 GWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGM-IAANDGVLLRNHISRILKNHF 137
G IE L + LV DDIMD + RRG P K G+ +A G LL ++L
Sbjct: 68 GAAIEVLHTFTLVHDDIMDQDNIRRGLPTVH--VKYGLPLAILAGDLLHAKAFQLLTQAL 125
Query: 138 RDKP--YYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYS 195
R P + D+F + GQ +D+ E D+ + + ++ KTA
Sbjct: 126 RGLPSETIIKAFDIFTRSIIIISEGQAVDM--EFEDRIDIKEQE---YLDMISRKTAAL- 179
Query: 196 FYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDY 254
F + L+AG N + + D +GI FQ+ DD L + +GK V +DI +
Sbjct: 180 FSASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKPVFSDIREG 239
Query: 255 KCSWLVVKALELCNEEQKKLVHENYG 280
K + LV+K LELC E++KK+V + G
Sbjct: 240 KKTILVIKTLELCKEDEKKIVLKALG 265
>sp|Q58270|IDSA_METJA Short chain isoprenyl diphosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=idsA PE=3 SV=1
Length = 327
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 31/277 (11%)
Query: 45 GGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRG 104
GGK R V +Y L K+ D E L +A +E + Y L+ DDIMD RRG
Sbjct: 46 GGKRIRPYLTVVTYMLKKD-----DIEEVLPAA--AAVELIHNYTLIHDDIMDNDDERRG 98
Query: 105 QPCWFRVPKVGM-IAANDGVLLR--NHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQ 161
+P V M I A D + + +SRI +D ++L + ++ + GQ
Sbjct: 99 KPTVHVVYGEPMAILAGDLLYAKAFEAVSRI-----KDNKKAHEVLKILSKACVEVCEGQ 153
Query: 162 MIDLITTIEGEKDLSKY--SLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKD 219
+D+ + Y ++ + +++ KT V +MA N ++ +K+
Sbjct: 154 AMDM--------EFENYYPTMEEYLDMIRKKTGAL-LEASVGIGAVMADCNEEEREALKE 204
Query: 220 ILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHEN 278
++G+ FQ+QDD LD G + +GK VG+DI + K + +V+ AL+ +E++KK + E
Sbjct: 205 YAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTIIVIHALKTLDEDKKKRLLEI 264
Query: 279 YGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLT 315
G + K +E+ + +++ +EY KE ++ T
Sbjct: 265 LGNKN----VKDEEIKEAIEILKPSIEYAKELMKQKT 297
>sp|Q53479|IDSA_METTM Short chain isoprenyl diphosphate synthase OS=Methanothermobacter
marburgensis (strain DSM 2133 / 14651 / NBRC 100331 /
OCM 82 / Marburg) GN=idsA PE=1 SV=3
Length = 325
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 9/222 (4%)
Query: 75 SSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILK 134
++ + IE + + L+ DDIMD RRG+P + M VL +++
Sbjct: 65 AAGVAAAIELIHTFSLIHDDIMDDDEMRRGEPSVHVIWGEPMAILAGDVLFSKAFEAVIR 124
Query: 135 NHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYY 194
N D D L + + + GQ +D+ E D+++ + ++ YK
Sbjct: 125 NG--DSERVKDALAVVVDSCVKICEGQALDM--GFEERLDVTEDE---YMEMI-YKKTAA 176
Query: 195 SFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIED 253
+M G + + ++D +G+ FQ+ DD+LD E +GK VG+DI +
Sbjct: 177 LIAAATKAGAIMGGASEREVEALEDYGKFIGLAFQIHDDYLDVVSDEESLGKPVGSDIAE 236
Query: 254 YKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYK 295
K + +VVKALE +EE ++ + G D VA+ E+++
Sbjct: 237 GKMTLMVVKALEEASEEDRERLISILGSGDEGSVAEAIEIFE 278
>sp|O26156|IDSA_METTH Short chain isoprenyl diphosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=idsA PE=3 SV=1
Length = 325
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 9/222 (4%)
Query: 75 SSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILK 134
++ + IE + + L+ DDIMD RRG+P + M VL +++
Sbjct: 65 AAGVAAAIELIHTFSLIHDDIMDDDEIRRGEPAVHVLWGEPMAILAGDVLFSKAFEAVIR 124
Query: 135 NHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYY 194
N D + L + + + GQ +D+ E D+++ + ++ YK
Sbjct: 125 NG--DSEMVKEALAVVVDSCVKICEGQALDM--GFEERLDVTEEE---YMEMI-YKKTAA 176
Query: 195 SFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIED 253
+M G + + ++D +G+ FQ+ DD+LD E +GK VG+DI +
Sbjct: 177 LIAAATKAGAIMGGGSPQEIAALEDYGRCIGLAFQIHDDYLDVVSDEESLGKPVGSDIAE 236
Query: 254 YKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYK 295
K + +VVKALE +E+ ++ + G D VA+ E+++
Sbjct: 237 GKMTLMVVKALERASEKDRERLISILGSGDEKLVAEAIEIFE 278
>sp|Q08291|ISPA_GEOSE Farnesyl diphosphate synthase OS=Geobacillus stearothermophilus
PE=1 SV=1
Length = 297
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 45 GGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTR 102
GGK R L ++ + R L GK D L A IE + Y L+ DD+ MD R
Sbjct: 45 GGKRIRPLLLLSTVRAL--GK---DPAVGLPVA--CAIEMIHTYSLIHDDLPSMDNDDLR 97
Query: 103 RGQPCWFRVPKVGM-IAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQ 161
RG+P +V M I A DG LL I + P V L + + G
Sbjct: 98 RGKPTNHKVFGEAMAILAGDG-LLTYAFQLITEIDDERIPPSVRLRLIERLAKAAGPEGM 156
Query: 162 MIDLITTIEGE-KDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 220
+ +EGE K L+ L R K YS + L+ G + + E+ +
Sbjct: 157 VAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVH----AGALIGGADARQTRELDEF 212
Query: 221 LVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEE-----QKKL 274
+G+ FQ++DD LD G+ E IGK VG+D + K ++ + +L E+ +
Sbjct: 213 AAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPALLSLAGAKEKLAFHIEAAQ 272
Query: 275 VHENYGKVDPACVAKVKELYKTLD 298
H VD A +A + EL D
Sbjct: 273 RHLRNADVDGAALAYICELVAARD 296
>sp|O66126|ISPA_MICLU Farnesyl diphosphate synthase OS=Micrococcus luteus GN=fps PE=3
SV=1
Length = 291
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 18 ELLNDPAFEFDHDSRQWVDRMLDYNV-PGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSS 76
L+N+ H ++ + ++Y++ GGK R L V+ + L G D F
Sbjct: 14 NLINESLLNKYHPAQSRLHEAINYSLSAGGKRIRPLLVLTTLDSL--GGNAHDGLPF--- 68
Query: 77 ALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWF-RVPKVGMIAANDGVLLRNHISRIL 133
G +E + Y L+ DD+ MD RRG+ R + I A D LL + IL
Sbjct: 69 --GIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKRFDEATAILAGD-ALLTDAFQCIL 125
Query: 134 KNHFRDKPYYVDLLDLFNEVEFQTAS--GQMIDLITTIEGE-KDLSKYSLPLHRRIVQYK 190
+ + L++L + GQM+D+ +GE K L+ L RI +K
Sbjct: 126 NTQL-NAEIKLSLINLLSTASGSNGMVYGQMLDM----QGEHKTLTLNEL---ERIHIHK 177
Query: 191 TAYYSFYLPVACALLMAGENLDKHVEVKDILVQ-MGIYFQVQDDFLDCFGSPEVIGK-VG 248
T V+ ++M D +E +I+ + +G+ FQ++DD LD GS E IGK VG
Sbjct: 178 TGELIRAAIVSAGIIMNFN--DAQIEQLNIIGKNVGLMFQIKDDILDVEGSFENIGKTVG 235
Query: 249 TDIEDYKCSWLVVKALE 265
+D+ + K +++ + LE
Sbjct: 236 SDLNNDKSTYVSLLGLE 252
>sp|P54383|ISPA_BACSU Farnesyl diphosphate synthase OS=Bacillus subtilis (strain 168)
GN=ispA PE=3 SV=2
Length = 296
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 78 LGWCIEWLQAYFLV--LDDIMDGSHTRRGQPCWFRV-PKVGMIAANDGVLLRNHISRILK 134
+G +E + Y L+ MD RRG+P +V + + A DG+L + +++
Sbjct: 70 VGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESF--KLIT 127
Query: 135 NHFRDKPYYVDLLDLFNEVEFQTAS-----GQMIDLITTIEGEKDLSKYSLPLHRRIVQY 189
+H D+ L L NE+ + GQ+ D+ E + + +L I +
Sbjct: 128 SHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADM------EAENRQVTLEELESIHER 181
Query: 190 KTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VG 248
KTA + +A A+L D ++ +GI FQ++DD LD GS E IGK VG
Sbjct: 182 KTAKLLGFCVIAGAILADAPEEDIET-LRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVG 240
Query: 249 TDIEDYKCSWLVVKALE 265
+D + K ++ + +LE
Sbjct: 241 SDTTNDKSTYPSLLSLE 257
>sp|P95999|GGPS_SULSO Geranylgeranyl diphosphate synthase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=gds
PE=3 SV=2
Length = 332
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 19/242 (7%)
Query: 43 VPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTR 102
GGK R L +V S L+ +E + ++A +E L + LV DDIMD R
Sbjct: 41 TAGGKRLRPLVLVSSSDLIGGDRERA----YKAAA---AVEILHNFTLVHDDIMDNDGLR 93
Query: 103 RGQPC-WFRVPKVGMIAANDGVLLR--NHISRILKNHFRDKPYYVDLLDLFNEVEFQTAS 159
RG P + + I A D + + ++ LK +Y +E +
Sbjct: 94 RGLPTVHVKWGEPMAILAGDYLHAKAFEALNEALKG-LDGNTFYKAFSIFITSIEI-ISE 151
Query: 160 GQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKD 219
GQ +D+ + E D+++ + ++++ KTA F A ++ N D ++ +
Sbjct: 152 GQAMDM--SFENRLDVTEEE---YIQMIKGKTAML-FSCSAALGGIINKANDDVVKKLTE 205
Query: 220 ILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHEN 278
+ +GI FQ+ DD L G + +GK + +DI + K + LV+K L E++KK++
Sbjct: 206 YGLNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTILVIKTLSEATEDEKKILVST 265
Query: 279 YG 280
G
Sbjct: 266 LG 267
>sp|Q9LJY2|GGPPA_ARATH Geranylgeranyl pyrophosphate synthase 10, mitochondrial
OS=Arabidopsis thaliana GN=At3g20160 PE=2 SV=1
Length = 344
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 121/293 (41%), Gaps = 28/293 (9%)
Query: 5 KSRFIEVYGVLKQELLNDPAFEFDHDS-----RQWVDRMLDYNVPGGKLNRGLSVVDSYR 59
+ R+ +V L + L + +++F S + V++ L+ VP + + Y
Sbjct: 26 RPRYNDVTSALTRPLTSAASYDFKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYT 85
Query: 60 LLKEGK-----------ELTDDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQP 106
LL +GK EL + + + IE L A L+LDD+ MD RRG+P
Sbjct: 86 LLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKP 145
Query: 107 CWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKP---YYVDLLDLFNEVEFQTASGQMI 163
V + L+ + + + F D P + ++ VE A GQ
Sbjct: 146 TNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILKTVQEMVKAVEGLVA-GQQA 204
Query: 164 DLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVE-VKDILV 222
DL EG + S L I +KTA V A++ G D+ +E ++
Sbjct: 205 DLAG--EGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGS--DEEIERLRSYAR 260
Query: 223 QMGIYFQVQDDFLDCFGSPEVIGKV-GTDIEDYKCSWLVVKALELCNEEQKKL 274
+G+ FQV DD LD S E +GK G D+ K ++ + +E E ++L
Sbjct: 261 CIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKEYAERL 313
>sp|P44916|ISPB_HAEIN Octaprenyl-diphosphate synthase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ispB PE=1 SV=1
Length = 329
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 31/296 (10%)
Query: 45 GGKLNRGLSVVDSYRLLK-EGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRR 103
GGK R L V + R L EG S +E++ L+ DD++D S RR
Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSN--------SITCATFVEFIHTASLLHDDVVDESDMRR 100
Query: 104 GQPCWFRVPKVGMIAANDGVLLRNHI-SRILKNHFRDKPYYVDLLDLFNEVEFQTASGQM 162
G+ + G A+ VL+ + I +R + + + +L + + A G++
Sbjct: 101 GRATAN--AEFGNAAS---VLVGDFIYTRAFQ--LVAQLESLKILSIMADATNVLAEGEV 153
Query: 163 IDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILV 222
L+ + E + Y R++ KTA F + A ++AG + ++D
Sbjct: 154 QQLMNVNDPETSEANY-----MRVIYSKTARL-FEVAGQAAAIVAGGTEAQEKALQDYGR 207
Query: 223 QMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENY-- 279
+G FQ+ DD LD + + +GK VG D+ + K + ++ A+ N +Q L+ E
Sbjct: 208 YLGTAFQLVDDVLDYSANTQALGKNVGDDLAEGKPTLPLLHAMRHGNAQQAALIREAIEQ 267
Query: 280 -GKVDPAC-VAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSF 333
GK + V + +K+LD + KE +K +IE P E + L S
Sbjct: 268 GGKREAIDEVLAIMTEHKSLDYA---MNRAKEEAQKAVDAIEILPESEYKQALISL 320
>sp|P57537|ISPA_BUCAI Farnesyl diphosphate synthase OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=ispA PE=3 SV=1
Length = 282
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 77 ALGWCIEWLQAYFLVLDDI--MDGSHTRRGQ-PCWFRVPKVGMIAANDGVLLRNHISRIL 133
+ IE++ +Y L+ DD+ MD + RRG+ C + + + A D L++ IL
Sbjct: 68 VISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDA--LQSLAFNIL 125
Query: 134 KNHFRDKPYYVDLLDLFNEVEFQTAS-----GQMIDLITTIEGEK-DLSKYSLPLHRRIV 187
N F + + + +E+ + S GQ +DL E EK D++ L + I
Sbjct: 126 SNSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDL----EAEKKDVNLSELEI---IN 178
Query: 188 QYKTAYYSFYLPVACALL-MAGENLDKHV-EVKDIL-VQMGIYFQVQDDFLD 236
YKT SF + A L+ + N K + + D+ + +G+ FQ+QDD LD
Sbjct: 179 LYKT---SFLMRSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILD 227
>sp|O24743|SDSA_RHOCA All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate
specific) OS=Rhodobacter capsulatus GN=sdsA PE=1 SV=1
Length = 325
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 41/256 (16%)
Query: 78 LGWCIEWLQAYFLVLDDIMDGSHTRRGQP----CWFRVPKVGMIAANDGVLLRNHISRIL 133
L IE L LV DD++D S RRG+P W N+ + +L
Sbjct: 73 LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATW------------------NNQTAVL 114
Query: 134 KNHFRDKPYYVDLLDLFNEV---EFQT-----ASGQMIDLITTIEGEKDLSKYSLPLHRR 185
F + L+DL N + +F T A G+++ L + + D ++ ++ +
Sbjct: 115 VGDFLIARAFDLLVDLDNMILLKDFSTGTCEIAEGEVLQL--QAQHQPDTTE---DIYLQ 169
Query: 186 IVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIG 245
I+ KT+ F L A ++AG+ + ++ G FQ+ DD LD + +G
Sbjct: 170 IIHGKTSRL-FELATEGAAILAGKP-EYREPLRRFAGHFGNAFQIIDDILDYTSDADTLG 227
Query: 246 K-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFV 304
K +G D+ + K + ++ A++ EQ+ L+ + + ++++++ + GA
Sbjct: 228 KNIGDDLMEGKPTLPLIAAMQNTQGEQRDLIRRS---IATGGTSQLEQVIAIVQNSGALD 284
Query: 305 EYEKESYEKLTKSIEA 320
K + E+ ++++A
Sbjct: 285 YCHKRATEETERALQA 300
>sp|O04046|GGPP2_ARATH Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2
OS=Arabidopsis thaliana GN=GGPPS2 PE=1 SV=2
Length = 376
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 31/273 (11%)
Query: 25 FEFD---HDSRQWVDRMLDYNVPGG---KLNRGLSVVDSYRLLKEGK-----------EL 67
FEFD + V++ L+ +P G K++ + Y +L GK EL
Sbjct: 83 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMR----YAILAAGKRVRPILCLASCEL 138
Query: 68 TDDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGMIAANDGVLL 125
+ + +E + L+ DD+ MD RRG+P +V G+ + G LL
Sbjct: 139 VGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALL 198
Query: 126 RNHISRILKNHFRDKPYYVDLLDLFNEVEFQT-ASGQMIDLITTIEGEKDLSKYSLPLHR 184
+ + + +L + + +GQ +D+ + EG DL++ L
Sbjct: 199 SLAFEHMTTAEISSERMVWAVRELARSIGTRGLVAGQAMDISS--EG-LDLNEVGLEHLE 255
Query: 185 RIVQYKTAYYSFYLPVACALLMAGENLDKHVE-VKDILVQMGIYFQVQDDFLDCFGSPEV 243
I +KTA V A++ G D+ +E V+ +G+ FQV DD LD S E
Sbjct: 256 FIHVHKTAVLLETAAVLGAIIGGGS--DEEIESVRKFARCIGLLFQVVDDILDETKSSEE 313
Query: 244 IGKV-GTDIEDYKCSWLVVKALELCNEEQKKLV 275
+GK G D K ++ + LE E K+L
Sbjct: 314 LGKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLT 346
>sp|P0AD58|ISPB_SHIFL Octaprenyl-diphosphate synthase OS=Shigella flexneri GN=ispB PE=3
SV=1
Length = 323
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 27/202 (13%)
Query: 82 IEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKP 141
IE++ L+ DD++D S RRG+ A N S ++ + +
Sbjct: 73 IEFIHTATLLHDDVVDESDMRRGK-------------ATANAAFGNAASVLVGDFIYTRA 119
Query: 142 YYV-------DLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYY 194
+ + +L++ +E A G+++ L+ + D+++ + + R++ KTA
Sbjct: 120 FQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNV--NDPDITEEN---YMRVIYSKTARL 174
Query: 195 SFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIED 253
F C+ ++AG ++ ++D +G FQ+ DD LD E +GK VG D+ +
Sbjct: 175 -FEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNE 233
Query: 254 YKCSWLVVKALELCNEEQKKLV 275
K + ++ A+ EQ +++
Sbjct: 234 GKPTLPLLHAMHHGTPEQAQMI 255
>sp|P0AD57|ISPB_ECOLI Octaprenyl-diphosphate synthase OS=Escherichia coli (strain K12)
GN=ispB PE=1 SV=1
Length = 323
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 27/202 (13%)
Query: 82 IEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKP 141
IE++ L+ DD++D S RRG+ A N S ++ + +
Sbjct: 73 IEFIHTATLLHDDVVDESDMRRGK-------------ATANAAFGNAASVLVGDFIYTRA 119
Query: 142 YYV-------DLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYY 194
+ + +L++ +E A G+++ L+ + D+++ + + R++ KTA
Sbjct: 120 FQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNV--NDPDITEEN---YMRVIYSKTARL 174
Query: 195 SFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIED 253
F C+ ++AG ++ ++D +G FQ+ DD LD E +GK VG D+ +
Sbjct: 175 -FEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNE 233
Query: 254 YKCSWLVVKALELCNEEQKKLV 275
K + ++ A+ EQ +++
Sbjct: 234 GKPTLPLLHAMHHGTPEQAQMI 255
>sp|Q8K9A0|ISPA_BUCAP Farnesyl diphosphate synthase OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=ispA PE=3 SV=1
Length = 294
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 30/175 (17%)
Query: 77 ALGWCIEWLQAYFLVLDDI--MDGSHTRRGQ-PCWFRVPKVGMIAANDGVLLRNHISRIL 133
+ +E + +Y L+ DD+ +D + RRG+ C + + + A D L+ IL
Sbjct: 68 VISAAVELVHSYSLIHDDLPCIDNDYFRRGKISCHIKYGENFALLAGDA--LQGLAFNIL 125
Query: 134 KNHFRDKPYYVDLLDLFNEVEFQTASG-------QMIDLITTIEGEKDLSKYSLPLHRRI 186
N + P D + L EF A G QM+DL EK+ K ++ +I
Sbjct: 126 SNS--NMPGVHDSIRLKMIAEFSNAIGYSGMCIGQMLDL------EKERKKINISELEKI 177
Query: 187 VQYKTAYYSFYLPVACALLMA---GENLDKHVE--VKDILVQMGIYFQVQDDFLD 236
YKTA+ + C++ +A N K V + V +G+ FQ+QDD LD
Sbjct: 178 NLYKTAFL-----IRCSIRLAYFASNNFSKEVLFILDKFSVSIGLAFQIQDDILD 227
>sp|P0A5H8|EFPP_MYCTU (2E,6E)-farnesyl diphosphate synthase OS=Mycobacterium tuberculosis
GN=Rv3398c PE=1 SV=1
Length = 359
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 24/191 (12%)
Query: 81 CIEWLQAYFLVLDDIMDGSHTRRGQPC-WFRVPKVGMIAANDGVLLRNHISRILKNHFRD 139
+E + + LV DD+MD RR +P W + A D +L H +L + D
Sbjct: 100 SVELVHNFSLVHDDLMDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAH--EVLLDC--D 155
Query: 140 KPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLP 199
P+ L +E + GQ D T E D++ L ++ + KTA
Sbjct: 156 SPHVGAALRAISEATRELIRGQAAD--TAFESRTDVA---LDECLKMAEGKTAALMAASA 210
Query: 200 VACALLMAGENLDKHVEVKDILV----QMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDY 254
ALL V++ LV +G+ FQ+ DD L +G PE+ GK V +D+
Sbjct: 211 EVGALLAGAPR-----SVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSR 265
Query: 255 K----CSWLVV 261
K +W V
Sbjct: 266 KKTLPVTWTVA 276
>sp|P0A5H9|EFPP_MYCBO (2E,6E)-farnesyl diphosphate synthase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb3431c PE=3 SV=1
Length = 359
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 24/191 (12%)
Query: 81 CIEWLQAYFLVLDDIMDGSHTRRGQPC-WFRVPKVGMIAANDGVLLRNHISRILKNHFRD 139
+E + + LV DD+MD RR +P W + A D +L H +L + D
Sbjct: 100 SVELVHNFSLVHDDLMDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAH--EVLLDC--D 155
Query: 140 KPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLP 199
P+ L +E + GQ D T E D++ L ++ + KTA
Sbjct: 156 SPHVGAALRAISEATRELIRGQAAD--TAFESRTDVA---LDECLKMAEGKTAALMAASA 210
Query: 200 VACALLMAGENLDKHVEVKDILV----QMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDY 254
ALL V++ LV +G+ FQ+ DD L +G PE+ GK V +D+
Sbjct: 211 EVGALLAGAPR-----SVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSR 265
Query: 255 K----CSWLVV 261
K +W V
Sbjct: 266 KKTLPVTWTVA 276
>sp|C9K2Q3|FUSS_ALTBR Fusicoccadiene synthase OS=Alternaria brassicicola GN=bsc8 PE=1
SV=1
Length = 697
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 18/177 (10%)
Query: 75 SSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILK 134
+S + I L L+LDD+ DGS RR +P RV V N L N ++++
Sbjct: 437 ASQVKMAIRMLHNASLMLDDVQDGSRLRRSKPSAHRVFGVAQ-TTNSAAFLVNESIKLIR 495
Query: 135 NHFRDKPYYV---DLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKT 191
D+ L LF GQ DL ++LS SL + + + KT
Sbjct: 496 ELAGDQGVAAVLEKLTSLF--------VGQAQDL----HSSRNLSPPSLTEYIQTIDQKT 543
Query: 192 AYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVG 248
+ F L L + + + + + +G +FQ++DD+ + SPE + G
Sbjct: 544 SAL-FELASRLMCLCSTATVVPNSSLSRFCILLGRFFQIRDDYQN-LTSPEYTKQKG 598
>sp|Q0INZ4|SPS3_ORYSJ Probable solanesyl-diphosphate synthase 3, chloroplastic (Fragment)
OS=Oryza sativa subsp. japonica GN=SPS3 PE=3 SV=1
Length = 372
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 121/261 (46%), Gaps = 22/261 (8%)
Query: 78 LGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRV--PKVGMIAANDGVLLRNHISRILKN 135
L IE + L+ DD++D S RRG+ ++ +V ++A G + S L N
Sbjct: 122 LAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLA---GDFMFAQSSWFLAN 178
Query: 136 HFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYS 195
++++ L ++V ASG++ T + + L Y L + YKTA
Sbjct: 179 L-----ENIEVIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLKSY-----YKTASL- 227
Query: 196 FYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDY 254
A + +G + ++ + +G+ FQV DD LD S E +GK G+D+
Sbjct: 228 IAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKG 287
Query: 255 KCSWLVVKALELCNEEQ-KKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEK 313
+ V+ AL+ +E Q ++++ + + + A ++ ++++ ++ A E +E E
Sbjct: 288 NLTAPVIFALQ--DEPQLREIIDSEFSETNSLATA-IELVHRSGGIKRAH-ELAREKGEI 343
Query: 314 LTKSIEAHPTKEVQAVLKSFL 334
+S++ P E ++ L++ +
Sbjct: 344 AIQSLQCLPRSEFRSTLENMV 364
>sp|Q9SLG2|GGPP4_ARATH Geranylgeranyl pyrophosphate synthase 4 OS=Arabidopsis thaliana
GN=GGPP4 PE=2 SV=1
Length = 372
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 113/279 (40%), Gaps = 35/279 (12%)
Query: 21 NDPAFEFDH-----DSRQWVDRMLDYNVPGGKLNRGLSVVDS--YRLLKEGK-------- 65
+D F FD + ++R LD +P L L++ + Y +L GK
Sbjct: 73 DDFGFSFDFKPYMISKAETINRALDEAIP---LIEPLNIHKAMRYAILAGGKRVRPILCL 129
Query: 66 ---ELTDDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGMIAAN 120
EL E L+ +E + L+ DD+ MD RRG+P +V + +
Sbjct: 130 AACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILS 189
Query: 121 DGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQT-ASGQMIDLITTIEGEKDLSKYS 179
G LL + + K + +L + + +GQ DL + + D+
Sbjct: 190 GGALLALAFEHLTEADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLED 249
Query: 180 LPLHRRIVQYKTAYYSFYLPVACALLMA--GENLDKHVE-VKDILVQMGIYFQVQDDFLD 236
L +Y + + L A A++ A G +K +E V++ +G+ FQV DD LD
Sbjct: 250 L-------EYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILD 302
Query: 237 CFGSPEVIGKV-GTDIEDYKCSWLVVKALELCNEEQKKL 274
S E +GK G D K ++ V +E E +KL
Sbjct: 303 ETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKL 341
>sp|P34802|GGPP1_ARATH Heterodimeric geranylgeranyl pyrophosphate synthase large subunit
1, chloroplastic OS=Arabidopsis thaliana GN=GGPPS1 PE=1
SV=2
Length = 371
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 111/268 (41%), Gaps = 32/268 (11%)
Query: 33 QWVDRMLDYNVPGGKLNRGLSVVDS--YRLLKEGK-----------ELTDDEFFLSSALG 79
+ V++ LD VP L L + ++ Y LL GK EL E +
Sbjct: 85 ELVNKALDSAVP---LREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAA 141
Query: 80 WCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRV--PKVGMIAANDGVLLRNHISRILKN 135
+E + L+ DD+ MD RRG+P +V V ++A + LL +
Sbjct: 142 CAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD--ALLSFAFEHLASA 199
Query: 136 HFRDKPYYVDLLDLFNEVEFQTAS-----GQMIDLITTIEGEKDLSKYSLPLHRRIVQYK 190
D V ++ E+ + GQ++D+ + EG DL+ L I +K
Sbjct: 200 TSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISS--EG-LDLNDVGLEHLEFIHLHK 256
Query: 191 TAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKV-GT 249
TA V A++ G + D+ ++ +G+ FQV DD LD S + +GK G
Sbjct: 257 TAALLEASAVLGAIVGGGSD-DEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGK 315
Query: 250 DIEDYKCSWLVVKALELCNEEQKKLVHE 277
D+ K ++ + LE E +KL E
Sbjct: 316 DLIADKLTYPKIMGLEKSREFAEKLNRE 343
>sp|Q9LUE1|GGPP9_ARATH Geranylgeranyl pyrophosphate synthase 9, chloroplastic
OS=Arabidopsis thaliana GN=GGPPS9 PE=1 SV=1
Length = 360
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 114/281 (40%), Gaps = 32/281 (11%)
Query: 21 NDPAFEFDH---DSRQWVDRMLDYNVPGGKLNRGLSVVDS--YRLLKEGK---------- 65
N+ AF+F + V+ LD +VP L + L++ ++ Y LL GK
Sbjct: 60 NNSAFDFKLYMIRKAESVNAALDVSVP---LLKPLTIQEAVRYSLLAGGKRVRPLLCIAA 116
Query: 66 -ELTDDEFFLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGMIAANDG 122
EL + + + +E + L+ DD+ MD + RRG+P +V M
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176
Query: 123 VLLR---NHISRILKNHFRDKPYYVDLLDLFNEVEFQT-ASGQMIDLITTIEGEKDLSKY 178
LL H++ + + +++L + +GQMIDL + + L+
Sbjct: 177 ALLALAFEHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLAS-----ERLNPD 231
Query: 179 SLPL-HRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDC 237
+ L H + ++M G + +++ +G+ FQV DD LD
Sbjct: 232 KVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDV 291
Query: 238 FGSPEVIGKV-GTDIEDYKCSWLVVKALELCNEEQKKLVHE 277
S E +GK G D+ K ++ + LE E +KL E
Sbjct: 292 TKSTEELGKTAGKDVMAGKLTYPRLIGLEGSREVAEKLRRE 332
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,902,394
Number of Sequences: 539616
Number of extensions: 5971498
Number of successful extensions: 16359
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 16233
Number of HSP's gapped (non-prelim): 119
length of query: 342
length of database: 191,569,459
effective HSP length: 118
effective length of query: 224
effective length of database: 127,894,771
effective search space: 28648428704
effective search space used: 28648428704
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)