Query 019339
Match_columns 342
No_of_seqs 125 out of 1510
Neff 7.9
Searched_HMMs 13730
Date Mon Mar 25 14:34:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019339.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019339hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fpsa_ a.128.1.1 (A:) Farnesy 100.0 4E-67 2.9E-71 500.1 36.3 338 3-342 7-348 (348)
2 d2q80a1 a.128.1.1 (A:6-296) Ge 100.0 4.3E-60 3.1E-64 440.8 20.4 282 32-337 4-289 (291)
3 d1v4ea_ a.128.1.1 (A:) Octopre 100.0 8.4E-54 6.1E-58 395.9 26.8 256 37-323 22-279 (280)
4 d1rqja_ a.128.1.1 (A:) Farnesy 100.0 1.4E-54 1E-58 405.0 19.5 282 7-342 6-299 (299)
5 d1rtra_ a.128.1.1 (A:) Farnesy 100.0 4.7E-53 3.4E-57 393.0 25.5 279 8-340 5-290 (290)
6 d1ezfa_ a.128.1.2 (A:) Squalen 95.2 0.13 9.2E-06 45.8 13.1 143 149-325 105-247 (333)
7 d1di1a_ a.128.1.4 (A:) Aristol 84.4 6.7 0.00049 32.9 12.8 61 177-240 151-213 (300)
8 d1j2jb_ a.7.8.1 (B:) ADP-ribos 37.2 32 0.0024 19.7 4.4 29 268-296 4-32 (41)
9 d1ps1a_ a.128.1.4 (A:) Pentale 35.5 1.1E+02 0.0077 24.8 10.4 89 145-239 132-224 (311)
10 d5easa2 a.128.1.3 (A:221-548) 32.3 82 0.0059 26.5 8.7 86 146-239 141-231 (328)
11 d1kiya_ a.128.1.5 (A:) Trichod 30.9 1.5E+02 0.011 25.2 10.5 102 148-267 148-252 (354)
12 d1xkpa1 a.243.1.3 (A:73-269) O 28.7 38 0.0028 26.6 5.3 90 249-339 100-192 (197)
13 d1v4ea_ a.128.1.1 (A:) Octopre 23.6 64 0.0047 26.4 6.1 50 205-265 46-95 (280)
14 d2q80a1 a.128.1.1 (A:6-296) Ge 23.6 1.8E+02 0.013 23.5 11.7 50 205-265 32-81 (291)
15 d1n1ba2 a.128.1.3 (A:271-598) 23.2 2E+02 0.014 23.9 14.7 84 149-240 144-234 (328)
16 d1rqja_ a.128.1.1 (A:) Farnesy 21.3 63 0.0046 26.7 5.7 55 203-266 55-109 (299)
No 1
>d1fpsa_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=100.00 E-value=4e-67 Score=500.10 Aligned_cols=338 Identities=46% Similarity=0.806 Sum_probs=294.5
Q ss_pred hhHHHHHHHHHHHHHHHhCCC-CCCCCcchHHHHHHHhhcccCCCccchHHHHHHHHHHhhCCC-CCChHHHHHHHHHHH
Q 019339 3 DLKSRFIEVYGVLKQELLNDP-AFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGK-ELTDDEFFLSSALGW 80 (342)
Q Consensus 3 ~~~~~f~~~~~~l~~~l~~~~-~~~~~~~~~~~l~~~~~~~~~~GK~~Rp~l~~~~~~~~~~g~-~~~~~~~~~a~~lA~ 80 (342)
.++.+|.++|+.+-.++.... .-+.+.....++.++++|.+.||||+||++|+++++++ ||. ..+.+.+..++++|+
T Consensus 7 ~~~~~f~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~y~~~GGKrlRp~l~l~~~~~~-~~~~~~~~~~~~~~~~~A~ 85 (348)
T d1fpsa_ 7 REREEFVGFFPQIVRDLTEDGIGHPEVGDAVARLKEVLQYNAPGGKCNRGLTVVAAYREL-SGPGQKDAESLRCALAVGW 85 (348)
T ss_dssp HHHHHHHTTHHHHHHHHHTTTTTCTTTHHHHHHHHHHHHHHSSCSCCHHHHHHHHHHHHH-CCTTSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhccCCcccHhHHHHHHHHHHh-CCCcccchHHHHHHHHHHH
Confidence 467899999999999988732 22344556688999999999999999999999999999 442 233455667889999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCcCcccccccccch-hhHhhhHHHHHHHHHHHHHcccCCCchHHHHHHHHHHHHHHHhH
Q 019339 81 CIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVG-MIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTAS 159 (342)
Q Consensus 81 a~EllH~asLihDDI~D~~~~RRg~p~~~~~~g~~-~ia~~d~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (342)
++|+||+||||||||||+|++|||+||||++||++ ++..||+++. ..++.++.+...+.+...++++.+++++..++.
T Consensus 86 avEliH~asLihDDi~D~~~~RRG~pt~~~~~g~~~ail~gd~ll~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (348)
T d1fpsa_ 86 CIELFQAFFLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLE-SSVYRVLKKYCRQRPYYVHLLELFLQTAYQTEL 164 (348)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEETTEECTTTSTTTTTTHHHHHHHHH-HHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccccCCccccccchhhhhccccHHHHHHHHHHH-HHHHHHHHhhccchHHHHHHHHhhhhhhhHHHH
Confidence 99999999999999999999999999999999987 5566666543 345666666554555678899999999999999
Q ss_pred HHHHhccccccCcccCCCCCHHHHHHHHHcchhhhhhHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 019339 160 GQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACAL-LMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCF 238 (342)
Q Consensus 160 GQ~~d~~~~~~~~~~~~~~~~~~y~~~~~~KTg~l~~~~~~~~ga-~lag~~~~~~~~l~~~g~~lG~afQi~DDlld~~ 238 (342)
||.+|+.+......+...+++++|++|+.+|||.|+|..++.+++ ++++.+++..+.++.||.++|+||||+||++|++
T Consensus 165 GQ~ldl~~~~~~~~~~~~~t~~~Y~~~i~~KTa~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~lGiaFQI~DDilD~~ 244 (348)
T d1fpsa_ 165 GQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCF 244 (348)
T ss_dssp HHHHHHHHSCTTTCCSSSCCHHHHHHHHHHHTHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhhhccccccccccCHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccccchhhccccccccchHHHHHHHHhhhh
Confidence 999999887665555556799999999999999886656655554 5667788889999999999999999999999999
Q ss_pred CCccccCCcccchhhccchHHHHHHHhhccHHHHHHHHHHhCCCChHhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHh
Q 019339 239 GSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSI 318 (342)
Q Consensus 239 ~~~~~~GK~~~Dl~~gk~Tlp~l~al~~~~~~~~~~l~~~~~~~~~~~~~~i~~li~~~g~~~~~~~~~~~~~~~a~~~l 318 (342)
++++.+||.|+||++||+|||++++++.+++++++.|.+++++.+++++++++++++++|++++++++++.+.++|.+.+
T Consensus 245 gd~~~~GK~g~Dl~egK~Tlpii~al~~~~~~~r~~l~~~~~~~~~e~i~~v~~~i~~~g~~~~~~~~~~~~~~~a~~~l 324 (348)
T d1fpsa_ 245 GDPALTGKVGTDIQDNKCSWLVVQCLQRVTPEQRQLLEDNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSYRRLQELI 324 (348)
T ss_dssp CCSSCCSSCSCCCSSCCCCHHHHHHHHTCCHHHHHHHHHHSSSSCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhccCcccccccCCccHHHHHHHHHhCCHHHHHHHHHHhCCCCHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988888999999999999999999999999999999999
Q ss_pred hcCCChHHHHHHHHHHHHHhhccC
Q 019339 319 EAHPTKEVQAVLKSFLAKIYKRQK 342 (342)
Q Consensus 319 ~~lp~~~~~~~L~~l~~~~~~R~~ 342 (342)
+.+|++..++.|..+++++++|+|
T Consensus 325 ~~~~~~~~~~~L~~l~~~i~~R~k 348 (348)
T d1fpsa_ 325 EKHSNRLPKEIFLGLAQKIYKRQK 348 (348)
T ss_dssp TTTCSSSCTHHHHHHHHHHSCCCC
T ss_pred HcCCCcHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999987
No 2
>d2q80a1 a.128.1.1 (A:6-296) Geranylgeranyl pyrophosphate synthetase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=4.3e-60 Score=440.83 Aligned_cols=282 Identities=20% Similarity=0.142 Sum_probs=234.6
Q ss_pred HHHHHHHhhccc-CCCccchHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCcCcccccc
Q 019339 32 RQWVDRMLDYNV-PGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFR 110 (342)
Q Consensus 32 ~~~l~~~~~~~~-~~GK~~Rp~l~~~~~~~~~~g~~~~~~~~~~a~~lA~a~EllH~asLihDDI~D~~~~RRg~p~~~~ 110 (342)
...+.++++|.+ .||||+||.+++++++++ ++ +++ .+..+|+++|+||+||||||||||+|++|||+||+|+
T Consensus 4 ~~~l~e~~~y~~~~gGKr~Rp~l~~~~~~~~-~~---~~~---~~~~~a~aiEllH~asLihDDi~D~~~~RRg~pt~~~ 76 (291)
T d2q80a1 4 QRILLEPYKYLLQLPGKQVRTKLSQAFNHWL-KV---PED---KLQIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHS 76 (291)
T ss_dssp HHHHTHHHHHHTTSSCHHHHHHHHHHHHHHH-CC---CHH---HHHHHHHHHHHHHHHHHHHHHHHHTCSEETTEECHHH
T ss_pred hHHHHHHHHHHHhCCCchHHHHHHHHHHHHh-CC---CHH---HHHHHHHHHHHHHHHHHHhcccccCcccccCCCcccc
Confidence 356788999999 899999999999999999 34 343 3567899999999999999999999999999999999
Q ss_pred cccchhhHhhhHHHHHHHHHHHHHcccCCCchHHHHHHHHHHHHHHHhHHHHHhccccccCcccCCCCCHHHHHHHHHcc
Q 019339 111 VPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYK 190 (342)
Q Consensus 111 ~~g~~~ia~~d~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~GQ~~d~~~~~~~~~~~~~~~~~~y~~~~~~K 190 (342)
+||++ +|++.|+++++.++..+.+... ..+.+.+++.+..++.||.+|+.+..+. ..+++++|++|+.+|
T Consensus 77 ~~G~~-~Ail~gd~l~~~a~~~l~~~~~-----~~~~~~~~~~~~~~~~gq~~d~~~~~~~----~~~s~~~y~~ii~~K 146 (291)
T d2q80a1 77 IYGIP-SVINSANYVYFLGLEKVLTLDH-----PDAVKLFTRQLLELHQGQGLDIYWRDNY----TCPTEEEYKAMVLQK 146 (291)
T ss_dssp HHCHH-HHHHHHHHHHHHHHHHHHTTCC-----TTHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCCHHHHHHHHHHH
T ss_pred ccchh-hhhhHHHHHHHHHHHhhhhhhh-----hHHHHHHHHHHHHhHhcccccccccccc----ccCCHHHHHHHHHhc
Confidence 99987 4566666666778888876532 3567778888999999999999876532 246899999999999
Q ss_pred hhhhhhHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCccccCC-cccchhhccchHHHHHHHhhccH
Q 019339 191 TAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNE 269 (342)
Q Consensus 191 Tg~l~~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~afQi~DDlld~~~~~~~~GK-~~~Dl~~gk~Tlp~l~al~~~~~ 269 (342)
||+| |+++|.+|++++|.+++ +++||.++|+||||+||++|++++++.+|| .|+||++||+|||++++++..+.
T Consensus 147 T~~L-f~~~~~~ga~~~~~~~~----l~~~g~~lG~afQi~DD~ld~~~~~~~~GK~~g~Dl~~gK~Tlpvi~al~~~~~ 221 (291)
T d2q80a1 147 TGGL-FGLAVGLMQLFSDYKED----LKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPE 221 (291)
T ss_dssp HHHH-HHHHHHHHHHTCCCCSC----CHHHHHHHHHHHHHHHHHHHHHCC------CTTHHHHHTCCCHHHHHHHHHSTT
T ss_pred cchh-hHhhhhhhhhhcccchh----hHHHHHHHHHHHHHHHHhhhhccchhhccccccchhccCCCcHHHHHHHHhccc
Confidence 9999 99999999999998753 789999999999999999999999999999 89999999999999999997543
Q ss_pred HHHHHHHHHhCC--CChHhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHH
Q 019339 270 EQKKLVHENYGK--VDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKI 337 (342)
Q Consensus 270 ~~~~~l~~~~~~--~~~~~~~~i~~li~~~g~~~~~~~~~~~~~~~a~~~l~~lp~~~~~~~L~~l~~~~ 337 (342)
++.+.+++.+ .+++....+.++++++|+++++++.++.|.++|.+.|+.+|+++.++.|...+..+
T Consensus 222 --~~~l~~il~~~~~~~~~~~~i~~~l~~~ga~~~a~~~~~~~~~~A~~~L~~l~~~~~~~~L~~~L~~~ 289 (291)
T d2q80a1 222 --STQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKM 289 (291)
T ss_dssp --CCHHHHHHHHTCCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTT
T ss_pred --HHHHHHHHhcccCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 3445666543 35677889999999999999999999999999999999999887766665544433
No 3
>d1v4ea_ a.128.1.1 (A:) Octoprenyl-diphosphate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=8.4e-54 Score=395.93 Aligned_cols=256 Identities=19% Similarity=0.155 Sum_probs=215.6
Q ss_pred HHhhccc-CCCccchHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCcCcccccccccch
Q 019339 37 RMLDYNV-PGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVG 115 (342)
Q Consensus 37 ~~~~~~~-~~GK~~Rp~l~~~~~~~~~~g~~~~~~~~~~a~~lA~a~EllH~asLihDDI~D~~~~RRg~p~~~~~~g~~ 115 (342)
+.+.|.. .+|||+||.+|+++++++ || ..++ .++++|+++|++|+||||||||||+|.+|||+||||.+||++
T Consensus 22 ~~~~~~~~~~GKr~Rp~l~~~~~~~~-g~-~~~~----~~~~~AaaiEliH~asLIhDDi~D~s~~RRG~pt~h~~~g~~ 95 (280)
T d1v4ea_ 22 EQIMKDLPLYGKMLRVRLSILSFKNR-GV-EIGE----DAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDK 95 (280)
T ss_dssp HHHHTTSCCCCCCHHHHHHHHHHHHH-TC-CCCH----HHHHHHHHHHHHHHHHHHHHHHHHTCSEETTEECHHHHHCHH
T ss_pred HHHHhHhhCCcchHHHHHHHHHHHHc-CC-CccH----HHHHHHHHHHHHHHHHHHhhhHhhhcccccccchhhhccchh
Confidence 3456666 899999999999999999 44 2233 356789999999999999999999999999999999999987
Q ss_pred hhHhhhHHHHHHHHHHHHHcccCCCchHHHHHHHHHHHHHHHhHHHHHhccccccCcccCCCCCHHHHHHHHHcchhhhh
Q 019339 116 MIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYS 195 (342)
Q Consensus 116 ~ia~~d~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~GQ~~d~~~~~~~~~~~~~~~~~~y~~~~~~KTg~l~ 195 (342)
.+++.|+++++.++..+.... ...+.+.++..+..++.||.+|+.+... .+++++|++|+.+|||+|
T Consensus 96 -~ail~gd~l~~~a~~~l~~~~-----~~~~~~~l~~~~~~~~~Gq~~d~~~~~~------~~t~~~y~~~i~~KT~~l- 162 (280)
T d1v4ea_ 96 -AAVAAGDLVLVSAFHTVEEIG-----NNKLRRAFLNVIGKMSEAELIEQLSRYK------PITKEEYLRIVEGKSGAL- 162 (280)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHHHHTTS------CCCHHHHHHHHHHHTHHH-
T ss_pred -hhhhhHHHHHHhhhhcccccc-----cccccccchhhcccchhHHHHHHHhccC------CCCHHHHHHHHHhccccH-
Confidence 455555555577788887642 2567788889999999999999876542 579999999999999999
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCccccCC-cccchhhccchHHHHHHHhhccHHHHHH
Q 019339 196 FYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKL 274 (342)
Q Consensus 196 ~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~afQi~DDlld~~~~~~~~GK-~~~Dl~~gk~Tlp~l~al~~~~~~~~~~ 274 (342)
|.+||.+|++++|... +.+++||.++|+||||+||++|++++++ +|| .|+||++||+|||++++++.+++ .++.
T Consensus 163 f~~~~~~ga~l~g~~~---~~l~~~g~~lG~afQi~DD~ld~~~~~~-~GK~~g~Dl~~gK~T~p~i~al~~~~~-~~~~ 237 (280)
T d1v4ea_ 163 FGLALQLPALLEGELG---EDLYNLGVTIGTIYQMFDDIMDFAGMEK-IGKDGFLDLKNGVASFPLVTAMEKFPE-ARQM 237 (280)
T ss_dssp HHHHHHHHHHHHTCCC---HHHHHHHHHHHHHHHHHHHHHHHTTCCS-CCTTSSCCCTTTTCCHHHHHHHHHCHH-HHHH
T ss_pred HHHHHHHHHHHccccH---HHHHHHHHHHHHHHHHHHhhccccchhh-hcccchhhHhCCCccHHHHHHHHhCHH-HHHH
Confidence 9999999999999755 4589999999999999999999998864 799 89999999999999999998654 4333
Q ss_pred HHHHhCCCChHhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHhhcCCC
Q 019339 275 VHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPT 323 (342)
Q Consensus 275 l~~~~~~~~~~~~~~i~~li~~~g~~~~~~~~~~~~~~~a~~~l~~lp~ 323 (342)
+. .+++..+.++++++|+++++++.++.+.++|......+|+
T Consensus 238 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~l~d 279 (280)
T d1v4ea_ 238 FE-------NRDWSGLMSFMREKGILKECEETLKVLVKNVIIENSWLRD 279 (280)
T ss_dssp HH-------TTCHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCGGGCC
T ss_pred HH-------HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 32 2356789999999999999999999999999887766664
No 4
>d1rqja_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.4e-54 Score=404.99 Aligned_cols=282 Identities=22% Similarity=0.228 Sum_probs=217.8
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCCcchHHHHHHHhhccc-CCCccchHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHH
Q 019339 7 RFIEVYGVLKQELLN-DPAFEFDHDSRQWVDRMLDYNV-PGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEW 84 (342)
Q Consensus 7 ~f~~~~~~l~~~l~~-~~~~~~~~~~~~~l~~~~~~~~-~~GK~~Rp~l~~~~~~~~~~g~~~~~~~~~~a~~lA~a~El 84 (342)
.+..+.+.+++.+.+ -... +.....+.+++.|.+ .||||+||.+++++++++ |+ +++ .+.++|+++|+
T Consensus 6 ~~~~~~~~i~~~l~~~~~~~---~~~~~~l~e~~~y~~~~gGKrlRp~l~~~~~~~~-g~---~~~---~~~~~A~aiEl 75 (299)
T d1rqja_ 6 QLEACVKQANQALSRFIAPL---PFQNTPVVETMQYGALLGGKRLRPFLVYATGHMF-GV---STN---TLDAPAAAVEC 75 (299)
T ss_dssp HHHHHHHHHHHHHHHHHTTS---SSTTSHHHHHHHHHHHSSCCCHHHHHHHHHHHHT-TC---CHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhc---CCCCchHHHHHHHHhhCCcccHHHHHHHHHHHHc-CC---cch---hHHHHHHHHHH
Confidence 445555666666655 1111 112234778888887 999999999999999999 44 233 36789999999
Q ss_pred HHHHHHHhhhhc--CCCCCCcCcccccccccchhhHhhhHHHHHHHHHHHHHcccCCCchHHHHHHHHHHH-----HHHH
Q 019339 85 LQAYFLVLDDIM--DGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEV-----EFQT 157 (342)
Q Consensus 85 lH~asLihDDI~--D~~~~RRg~p~~~~~~g~~~ia~~d~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~ 157 (342)
+|+||||||||+ |+++.|||+||+|.+||+. +|++.|+++++.++..+.+...+.......+..+.+. +..+
T Consensus 76 lH~asLiHDDI~d~d~~~~RRG~pt~h~~~G~~-~AIl~Gd~l~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~l 154 (299)
T d1rqja_ 76 IHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEA-NAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGM 154 (299)
T ss_dssp HHHHHHHHHTSTTTTCCCEETTEECHHHHHCHH-HHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHHHHHHHHSTTTH
T ss_pred HHHHHHHHccchhhhhhhcccccccceeeeCcc-hhhhhcchHHHHHHHHHHhCCCccccHHHHHHHHHHHHHHhhHHHH
Confidence 999999999997 6668999999999999987 4555555566788888887644333333444444333 2468
Q ss_pred hHHHHHhccccccCcccCCCCCHHHHHHHHHcchhhhhhHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 019339 158 ASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMA-GENLDKHVEVKDILVQMGIYFQVQDDFLD 236 (342)
Q Consensus 158 ~~GQ~~d~~~~~~~~~~~~~~~~~~y~~~~~~KTg~l~~~~~~~~ga~la-g~~~~~~~~l~~~g~~lG~afQi~DDlld 236 (342)
+.||.+|+.+... .++++.|.+|+.+|||+| |.+++.+|+.++ +.+++..+.+++||.++|+||||+||++|
T Consensus 155 ~~GQ~ldl~~~~~------~~~~~~~~~i~~~KT~~l-~~~~~~~~a~~~~~~~~~~~~~l~~~g~~lGiaFQi~DD~lD 227 (299)
T d1rqja_ 155 CGGQALDLDAEGK------HVPLDALERIHRHKTGAL-IRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILD 227 (299)
T ss_dssp HHHHHHHHHTTTT------CCCHHHHHHHHHHHTHHH-HHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccC------cccHHHHHHHHHHHHhhH-HHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999987532 468999999999999999 889999988764 45666678899999999999999999999
Q ss_pred hcCCccccCC-cccchhhccchHHHHHHHhhccHHHHHHHHHHhCCCChHhHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Q 019339 237 CFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLT 315 (342)
Q Consensus 237 ~~~~~~~~GK-~~~Dl~~gk~Tlp~l~al~~~~~~~~~~l~~~~~~~~~~~~~~i~~li~~~g~~~~~~~~~~~~~~~a~ 315 (342)
++++++.+|| .|+|+++||+|||++++++.+.+.. +++.+++.
T Consensus 228 ~~~~~~~~GK~~g~Dl~egK~Tlp~i~~le~a~~~~------------------------------------~~~~~~~~ 271 (299)
T d1rqja_ 228 VVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKA------------------------------------RDLIDDAR 271 (299)
T ss_dssp HHSCHHHHSSCTTHHHHHTCCCHHHHHCHHHHHHHH------------------------------------HHHHHHHH
T ss_pred hccchhhcCCchhhHHHCCChhHHHHHHHHHHHHHH------------------------------------HHHHHHHH
Confidence 9999999999 8999999999999999998754322 22334556
Q ss_pred HHhhcCCC-hHHHHHHHHHHHHHhhccC
Q 019339 316 KSIEAHPT-KEVQAVLKSFLAKIYKRQK 342 (342)
Q Consensus 316 ~~l~~lp~-~~~~~~L~~l~~~~~~R~~ 342 (342)
+.|+.++. +..++.|+.+++++++|+|
T Consensus 272 ~~l~~l~~~~~~~~~L~~l~~~i~~R~K 299 (299)
T d1rqja_ 272 QSLKQLAEQSLDTSALEALADYIIQRNK 299 (299)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHHCCC
T ss_pred HHHHhhhcccccHHHHHHHHHHHHhCCC
Confidence 66666653 3456889999999999987
No 5
>d1rtra_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=4.7e-53 Score=392.99 Aligned_cols=279 Identities=20% Similarity=0.267 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhccc-CCCccchHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHH
Q 019339 8 FIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNV-PGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQ 86 (342)
Q Consensus 8 f~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~GK~~Rp~l~~~~~~~~~~g~~~~~~~~~~a~~lA~a~EllH 86 (342)
|..+.+.+..+++....-...+ ..+.+++.|.+ +||||+||.+++++++++ |+ +++ .++.+|+++|++|
T Consensus 5 ~~~~~~~~~~~l~~~~~~~~~~---~~l~~~~~y~l~~gGKr~Rp~l~~~~~~~~-~~---~~~---~~~~~A~avEllH 74 (290)
T d1rtra_ 5 MNKLIDEVNNELSVAINKSVMD---TQLEESMLYSLNAGGKRIRPVLLLLTLDSL-NT---EYE---LGMKSAIALEMIH 74 (290)
T ss_dssp HHHHHHHHHHHHHTSSCCCSSC---CSHHHHHHHHHTSCCCCHHHHHHHHHHHHT-TS---CGG---GGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccCC---hhHHHHHHhHhcCCcchHhHHHHHHHHHHc-CC---Cch---hhHHHHHHHHHHH
Confidence 4556677888887622111211 23888999988 899999999999999999 44 232 3678999999999
Q ss_pred HHHHHhhhh--cCCCCCCcCcccccccccchhhHhhhHHHHHHHHHHHHHcccCCCc-hHHHHHHHHHHH--HHHHhHHH
Q 019339 87 AYFLVLDDI--MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKP-YYVDLLDLFNEV--EFQTASGQ 161 (342)
Q Consensus 87 ~asLihDDI--~D~~~~RRg~p~~~~~~g~~~ia~~d~~~l~~~~~~~l~~~~~~~~-~~~~~~~~~~~~--~~~~~~GQ 161 (342)
+|||||||| +|++..|||+||+|.+||+. +++..|+++++.++.++........ ....+...++.. ...++.||
T Consensus 75 ~asLIHDDI~d~D~~~~RRg~pt~~~~~g~~-~Ail~Gd~l~~~a~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~GQ 153 (290)
T d1rtra_ 75 TYSLIHDDLPAMDNDDYRRGKLTNHKVYGEW-TAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQ 153 (290)
T ss_dssp HHHHHHHHSTTTTCCSEETTEECHHHHHCHH-HHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHSTTTHHHHH
T ss_pred HHHHHhcchhhhhhhhhhhcchhhHHHhhhh-HHHHcCcchhHHHHHHHHhCCCcchhhHhHHHHHHHHHHhHHHHHHhH
Confidence 999999999 59999999999999999987 4555555556777888876533221 122233332222 23578899
Q ss_pred HHhccccccCcccCCCCCHHHHHHHHHcchhhhhhHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCc
Q 019339 162 MIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSP 241 (342)
Q Consensus 162 ~~d~~~~~~~~~~~~~~~~~~y~~~~~~KTg~l~~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~afQi~DDlld~~~~~ 241 (342)
.+|+.+... ..+++.|..|+.+|||+| |.+++.+|+++++.+++..+.+++||.++|+||||+||++|++|++
T Consensus 154 ~~Dl~~~~~------~~~~~~~~~i~~~KT~~l-~~~~~~~~a~~~~~~~~~~~~l~~~g~~lG~aFQi~DD~lD~~g~~ 226 (290)
T d1rtra_ 154 MLDMQSEGQ------PIDLETLEMIHKTKTGAL-LTFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDE 226 (290)
T ss_dssp HHHHHTTTS------CCCHHHHHHHHHHHTHHH-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccc------CCCHHHHHHHHHHHHHHH-HHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 999987542 468999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred cccCC-cccchhhccchHHHHHHHhhccHHHHHHHHHHhCCCChHhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHhhc
Q 019339 242 EVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEA 320 (342)
Q Consensus 242 ~~~GK-~~~Dl~~gk~Tlp~l~al~~~~~~~~~~l~~~~~~~~~~~~~~i~~li~~~g~~~~~~~~~~~~~~~a~~~l~~ 320 (342)
+.+|| .|+|+++||+|||++++++.+. .....+.+++.+.+..
T Consensus 227 ~~~GK~~g~Di~~gK~T~p~i~a~~~a~------------------------------------~~~~~~~~~~~~~l~~ 270 (290)
T d1rtra_ 227 AKLGKKVGSDLENNKSTYVSLLGKDGAE------------------------------------DKLTYHRDAAVDELTQ 270 (290)
T ss_dssp CC-------------CCHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHHHT
T ss_pred HhhccCcccHhhcCCccHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHHHh
Confidence 99999 8999999999999999987532 2344455677788888
Q ss_pred CCChHHHHHHHHHHHHHhhc
Q 019339 321 HPTKEVQAVLKSFLAKIYKR 340 (342)
Q Consensus 321 lp~~~~~~~L~~l~~~~~~R 340 (342)
++....++.|.++++++++|
T Consensus 271 ~~~~~~~~~l~el~d~i~~R 290 (290)
T d1rtra_ 271 IDEQFNTKHLLEIVDLFYSR 290 (290)
T ss_dssp SCTTSCCHHHHHHHHHHHCC
T ss_pred CcCchhHHHHHHHHHHHHcC
Confidence 88766677899999999988
No 6
>d1ezfa_ a.128.1.2 (A:) Squalene synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.18 E-value=0.13 Score=45.84 Aligned_cols=143 Identities=8% Similarity=-0.014 Sum_probs=86.3
Q ss_pred HHHHHHHHHhHHHHHhccccccCcccCCCCCHHHHHHHHHcchhhhhhHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q 019339 149 LFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYF 228 (342)
Q Consensus 149 ~~~~~~~~~~~GQ~~d~~~~~~~~~~~~~~~~~~y~~~~~~KTg~l~~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~af 228 (342)
.+......+..|+..+.... -.|++++.+=.++=-|.. -.+.+.+-.. .+.+....+....++.++|+|+
T Consensus 105 ~i~~~~~~m~~gm~d~~~~~--------~~t~~dL~~Ycy~VAG~V-G~~l~~l~~~-~~~~~~~~~~~~~~A~~lG~Al 174 (333)
T d1ezfa_ 105 VIADICRRMGIGMAEFLDKH--------VTSEQEWDKYCHYVAGLV-GIGLSRLFSA-SEFEDPLVGEDTERANSMGLFL 174 (333)
T ss_dssp HHHHHHHHHHHHHHHHHTSC--------CCSHHHHHHHHHHHTHHH-HHHHHHHHHH-HTSSCHHHHHCHHHHHHHHHHH
T ss_pred chHHHHHHHhccHHHHccCc--------CCCHHHHHHHHHHHHHHH-HHHHHHHhCc-CCCccccHHHHHHHHHHHHHHH
Confidence 34444556667776665432 236666655555545554 2233333222 2323334466788999999999
Q ss_pred HHHhhhhhhcCCccccCCcccchhhccchHHHHHHHhhccHHHHHHHHHHhCCCChHhHHHHHHHHHHcChHHHHHHHHH
Q 019339 229 QVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEK 308 (342)
Q Consensus 229 Qi~DDlld~~~~~~~~GK~~~Dl~~gk~Tlp~l~al~~~~~~~~~~l~~~~~~~~~~~~~~i~~li~~~g~~~~~~~~~~ 308 (342)
|+.|=+.|+. .|+..|++-||.=..-+..-. ...+.. +.....+...+ +.....++
T Consensus 175 QltNIlRDi~----------eD~~~gR~YlP~e~l~~~g~~-----~~dl~~---~~~~~~~~~~~------~~l~~~A~ 230 (333)
T d1ezfa_ 175 QKTNIIRDYL----------EDQQGGREFWPQEVWSRYVKK-----LGDFAK---PENIDLAVQCL------NELITNAL 230 (333)
T ss_dssp HHHHHHHTHH----------HHHHHTCCCSCHHHHTTTCSS-----GGGGGS---GGGHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHhhH----------HHHhCCcEECCHHHHHHcCCC-----HHHHHh---ccchHHHHHHH------HHHHHHHH
Confidence 9999999984 588899999987655544221 112222 22223333333 33455788
Q ss_pred HHHHHHHHHhhcCCChH
Q 019339 309 ESYEKLTKSIEAHPTKE 325 (342)
Q Consensus 309 ~~~~~a~~~l~~lp~~~ 325 (342)
.|+..|++-+..+|...
T Consensus 231 ~~~~~a~~y~~~lp~~~ 247 (333)
T d1ezfa_ 231 HHIPDVITYLSRLRNQS 247 (333)
T ss_dssp TTHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHCCchh
Confidence 99999999999999754
No 7
>d1di1a_ a.128.1.4 (A:) Aristolochene synthase {Fungus (Penicillium roqueforti) [TaxId: 5082]}
Probab=84.42 E-value=6.7 Score=32.94 Aligned_cols=61 Identities=11% Similarity=-0.003 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHHcchhhhhhHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 019339 177 KYSLPLHRRIVQYKTAYYSFYLPVACALLMAG--ENLDKHVEVKDILVQMGIYFQVQDDFLDCFGS 240 (342)
Q Consensus 177 ~~~~~~y~~~~~~KTg~l~~~~~~~~ga~lag--~~~~~~~~l~~~g~~lG~afQi~DDlld~~~~ 240 (342)
.++.++|+.+=..-+|.. + .+.+.-...| -+++....+..+....+..-=+.||+..|-.+
T Consensus 151 ~psl~eYl~~R~~~~g~~-~--~~~l~e~~~g~~lp~~~~~~~~~l~~~~~~~~~l~NDl~S~~KE 213 (300)
T d1di1a_ 151 IHELGHYLEYREKDVGKA-L--LSALMRFSMGLRLSADELQDMKALEANCAKQLSVVNDIYSYDKE 213 (300)
T ss_dssp CCSHHHHHHHHHTCHHHH-H--HHHHHHHHHTCCCCHHHHHTTHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred CCCHHHHHHHHHhcccHH-H--HHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 479999998866666654 2 2333322222 35555666777777778777889999999654
No 8
>d1j2jb_ a.7.8.1 (B:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.19 E-value=32 Score=19.72 Aligned_cols=29 Identities=21% Similarity=0.318 Sum_probs=21.5
Q ss_pred cHHHHHHHHHHhCCCChHhHHHHHHHHHH
Q 019339 268 NEEQKKLVHENYGKVDPACVAKVKELYKT 296 (342)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~~~~i~~li~~ 296 (342)
+++..+.|.+++.+..|+++...-.+|+.
T Consensus 4 dEeksklL~~LLkS~~PeDLqaANrLIK~ 32 (41)
T d1j2jb_ 4 DEEKSKMLARLLKSSHPEDLRAANKLIKE 32 (41)
T ss_dssp CHHHHHHHHHHHTCSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 34556678888998899998777666654
No 9
>d1ps1a_ a.128.1.4 (A:) Pentalenene synthase {Streptomyces sp., UC5319 [TaxId: 1931]}
Probab=35.47 E-value=1.1e+02 Score=24.82 Aligned_cols=89 Identities=7% Similarity=-0.208 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHhHHHHHhccccccCcccCCCCCHHHHHHHHHcchhhhhhHHHHHHHHHHcC--CCHHHH--HHHHHH
Q 019339 145 DLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAG--ENLDKH--VEVKDI 220 (342)
Q Consensus 145 ~~~~~~~~~~~~~~~GQ~~d~~~~~~~~~~~~~~~~~~y~~~~~~KTg~l~~~~~~~~ga~lag--~~~~~~--~~l~~~ 220 (342)
.....+.+.+.....|...+..+...+. ..+|.++|+.+-..-+|.. + .+.++-...| .+++.. ..+..+
T Consensus 132 ~~~~r~~~~~~~~~~~~~~e~~~r~~~~---~~ps~~eYl~~R~~~~g~~-~--~~~l~~~~~g~~lp~~v~~~~~~~~l 205 (311)
T d1ps1a_ 132 AWCARSARHWRNYFDGYVDEAESRFWNA---PCDSAAQYLAMRRHTIGVQ-P--TVDLAERAGRFEVPHRVFDSAVMSAM 205 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC----------CHHHHHHHHHHHTCHH-H--HHHHHHHHHTCCCCHHHHTSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCC---CCCCHHHHHHHHHhcccHH-H--HHHHHHHHcCCCCCHHHHhhcchHHH
Confidence 3345566667778888888887754322 1368999999977777754 2 2222222223 244432 357778
Q ss_pred HHHHHHHHHHHhhhhhhcC
Q 019339 221 LVQMGIYFQVQDDFLDCFG 239 (342)
Q Consensus 221 g~~lG~afQi~DDlld~~~ 239 (342)
-...+...-+.||+..|-.
T Consensus 206 ~~~~~~~~~l~NDi~S~~k 224 (311)
T d1ps1a_ 206 LQIAVDVNLLLNDIASLEK 224 (311)
T ss_dssp HHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHhhhhHHHHHh
Confidence 8888888889999999853
No 10
>d5easa2 a.128.1.3 (A:221-548) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=32.33 E-value=82 Score=26.51 Aligned_cols=86 Identities=16% Similarity=0.026 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHhHHHHHhccccccCcccCCCCCHHHHHHHHHcchhhhhhHHHHHHHHHHc--CCCHHHHH---HHHHH
Q 019339 146 LLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMA--GENLDKHV---EVKDI 220 (342)
Q Consensus 146 ~~~~~~~~~~~~~~GQ~~d~~~~~~~~~~~~~~~~~~y~~~~~~KTg~l~~~~~~~~ga~la--g~~~~~~~---~l~~~ 220 (342)
++..+.+....++.+=..+..|..++. .|+.++|+++...-+|.. ++.+...++ ...++..+ ...++
T Consensus 141 ~~~~l~~~w~~~~~~~l~EA~W~~~g~----vPt~eEYl~~~~~s~~~~----~l~~~~~~~~g~~~~e~~~~~~~~p~l 212 (328)
T d5easa2 141 IVCHAIERMKEVVRNYNVESTWFIEGY----TPPVSEYLSNALATTTYY----YLATTSYLGMKSATEQDFEWLSKNPKI 212 (328)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCHHHHHHHHTGGGCHH----HHHHHHHHTCTTCCHHHHHHHHTCCHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHhCCC----CCChHhhhcceeeeehHH----HHHHHHHHhCCCCcHHHHHhcccchHH
Confidence 444455555566666666677776653 589999999886665653 233333322 23343332 23478
Q ss_pred HHHHHHHHHHHhhhhhhcC
Q 019339 221 LVQMGIYFQVQDDFLDCFG 239 (342)
Q Consensus 221 g~~lG~afQi~DDlld~~~ 239 (342)
....+....+.||+..+..
T Consensus 213 ~~~~~~i~RL~NDi~s~~~ 231 (328)
T d5easa2 213 LEASVIICRVIDDTATYEV 231 (328)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHH
Confidence 8889999999999999864
No 11
>d1kiya_ a.128.1.5 (A:) Trichodiene synthase {Fusarium sporotrichioides [TaxId: 5514]}
Probab=30.93 E-value=1.5e+02 Score=25.18 Aligned_cols=102 Identities=11% Similarity=-0.018 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhHHHHHhccccccCcccCCCCCHHHHHHHHHcchhhhhhHHHHHHHHHHcCC---CHHHHHHHHHHHHHH
Q 019339 148 DLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGE---NLDKHVEVKDILVQM 224 (342)
Q Consensus 148 ~~~~~~~~~~~~GQ~~d~~~~~~~~~~~~~~~~~~y~~~~~~KTg~l~~~~~~~~ga~lag~---~~~~~~~l~~~g~~l 224 (342)
..+.....+.++|..++...... -++.+.|....+.|||.- .+-...+.... +......+...-..+
T Consensus 148 ~~i~~s~l~fv~a~~~E~~~~~~------~p~s~~y~~yrR~~sG~~----e~ya~f~fp~~~fpe~~~~~~~~~ai~~~ 217 (354)
T d1kiya_ 148 LNLIRSTLDFFEGCWIEQYNFGG------FPGSHDYPQFLRRMNGLG----HCVGASLWPKEQFNERSLFLEITSAIAQM 217 (354)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCC------CTTCTTHHHHHHHHHHCH----HHHHHTTCCTTTCCTTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCC------CCChhhhHHHHHhccCcH----HHHHHHHcchhcCChHHHHHHHHHHHHHH
Confidence 34444556667888888765421 346667999999999963 22222332222 111122222223333
Q ss_pred HHHHHHHhhhhhhcCCccccCCcccchhhccchHHHHHHHhhc
Q 019339 225 GIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELC 267 (342)
Q Consensus 225 G~afQi~DDlld~~~~~~~~GK~~~Dl~~gk~Tlp~l~al~~~ 267 (342)
..+-=..||++-|..+.+. .....+++.+++-...
T Consensus 218 ~~~i~~~NDi~SfyKE~~~--------~ge~~N~V~vla~~~g 252 (354)
T d1kiya_ 218 ENWMVWVNDLMSFYKEFDD--------ERDQISLVKNYVVSDE 252 (354)
T ss_dssp HHHHHHHHHHHHHHHHHTC--------TTCCCCHHHHHHHHHT
T ss_pred HHHHHHhhhhhhcchhhhc--------CCCcccHHHHHHHHhC
Confidence 4445557999998643211 1124566666665553
No 12
>d1xkpa1 a.243.1.3 (A:73-269) Outer membrane protein yopN (LcrE) {Yersinia pestis [TaxId: 632]}
Probab=28.72 E-value=38 Score=26.63 Aligned_cols=90 Identities=9% Similarity=-0.049 Sum_probs=61.6
Q ss_pred cchhhccchHHHHHHHhhccHHHHHHHHHHhCCC---ChHhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHhhcCCChH
Q 019339 249 TDIEDYKCSWLVVKALELCNEEQKKLVHENYGKV---DPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKE 325 (342)
Q Consensus 249 ~Dl~~gk~Tlp~l~al~~~~~~~~~~l~~~~~~~---~~~~~~~i~~li~~~g~~~~~~~~~~~~~~~a~~~l~~lp~~~ 325 (342)
.-++-|..+.|...++..........|+.+|..- ..........+++++|..+. ....+-..+..-.-|++.+++-
T Consensus 100 ~~i~AG~Nia~~a~~f~~~~~~~~~~LR~lYr~~v~~~~~~~~~y~~~~~~~g~~~~-~~~l~fl~rALa~DL~s~~pSi 178 (197)
T d1xkpa1 100 ETIVLGARITPEAYRESQSGVNPLQPLRDTYRDAVMGYQGIYAIWSDLQKRFPNGDI-DSVILFLQKALSADLQSQQSGS 178 (197)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCTTSCH-HHHHHHHHHHHHHHHHHCCCSH
T ss_pred hHHHccHhhHHHHHHHHHhccCCHHHHHHHHHHHHcCCccHHHHHHHHHHHhChHHH-HHHHHHHHHHHHHHHhccCCCC
Confidence 3578899999999999874322335667776532 23344678888999887443 3345545555567888998887
Q ss_pred HHHHHHHHHHHHhh
Q 019339 326 VQAVLKSFLAKIYK 339 (342)
Q Consensus 326 ~~~~L~~l~~~~~~ 339 (342)
....|..++..+.+
T Consensus 179 ~~~~l~~lm~~l~~ 192 (197)
T d1xkpa1 179 GREKLGIVISDLQK 192 (197)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 78889888877654
No 13
>d1v4ea_ a.128.1.1 (A:) Octoprenyl-diphosphate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=23.59 E-value=64 Score=26.40 Aligned_cols=50 Identities=14% Similarity=0.039 Sum_probs=29.3
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCccccCCcccchhhccchHHHHHHHh
Q 019339 205 LMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALE 265 (342)
Q Consensus 205 ~lag~~~~~~~~l~~~g~~lG~afQi~DDlld~~~~~~~~GK~~~Dl~~gk~Tlp~l~al~ 265 (342)
.+++..++..-.+...-+-+=.++=|.||+.| + +++|+|++|+-..+...
T Consensus 46 ~~g~~~~~~~~~~AaaiEliH~asLIhDDi~D--~---------s~~RRG~pt~h~~~g~~ 95 (280)
T d1v4ea_ 46 NRGVEIGEDAISSLAALELVHLASLLHDDVID--G---------ARFRRGKETINFMYGDK 95 (280)
T ss_dssp HHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--T---------CSEETTEECHHHHHCHH
T ss_pred HcCCCccHHHHHHHHHHHHHHHHHHHhhhHhh--h---------cccccccchhhhccchh
Confidence 34444233333333344556677889999988 2 46677777776655444
No 14
>d2q80a1 a.128.1.1 (A:6-296) Geranylgeranyl pyrophosphate synthetase {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.58 E-value=1.8e+02 Score=23.53 Aligned_cols=50 Identities=10% Similarity=-0.071 Sum_probs=36.5
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCccccCCcccchhhccchHHHHHHHh
Q 019339 205 LMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALE 265 (342)
Q Consensus 205 ~lag~~~~~~~~l~~~g~~lG~afQi~DDlld~~~~~~~~GK~~~Dl~~gk~Tlp~l~al~ 265 (342)
.+.+.+++.+..+...-+.+=.++=|.||+.| .+++|+|++|+-..+.-.
T Consensus 32 ~~~~~~~~~~~~~a~aiEllH~asLihDDi~D-----------~~~~RRg~pt~~~~~G~~ 81 (291)
T d2q80a1 32 HWLKVPEDKLQIIIEVTEMLHNASLLIDDIED-----------NSKLRRGFPVAHSIYGIP 81 (291)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-----------TCSEETTEECHHHHHCHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhccccc-----------CcccccCCCccccccchh
Confidence 33455666667777777888889999999987 257788999876655444
No 15
>d1n1ba2 a.128.1.3 (A:271-598) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]}
Probab=23.24 E-value=2e+02 Score=23.94 Aligned_cols=84 Identities=14% Similarity=0.096 Sum_probs=49.4
Q ss_pred HHHHHHHHHhHHHHHhccccccCcccCCCCCHHHHHHHHHcchhhhhhHHHHHHHHHHc--C--CCHHHHHHHH---HHH
Q 019339 149 LFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMA--G--ENLDKHVEVK---DIL 221 (342)
Q Consensus 149 ~~~~~~~~~~~GQ~~d~~~~~~~~~~~~~~~~~~y~~~~~~KTg~l~~~~~~~~ga~la--g--~~~~~~~~l~---~~g 221 (342)
.+.++...++.+=..+..|...+. .||.++|++...--+|.. .+.+.+.++ + .+++..+-+. ++-
T Consensus 144 ~lk~~w~~l~~ayl~EakW~~~g~----vPt~eEYl~~~~vS~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 215 (328)
T d1n1ba2 144 YLRKSVVDLVEAYFHEAKWYHSGY----TPSLDEYLNIAKISVASP----AIISPTYFTFANASHDTAVIDSLYQYHDIL 215 (328)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC----CCCHHHHHHHHHHHTCHH----HHHHHHHTTSTTCCCCHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC----CCCHHHHHhhceehhhHH----HHHHHHHHhCCCccchHHHHHHHhccHHHH
Confidence 334444555566666667776553 589999999888777753 222233322 2 2333333333 577
Q ss_pred HHHHHHHHHHhhhhhhcCC
Q 019339 222 VQMGIYFQVQDDFLDCFGS 240 (342)
Q Consensus 222 ~~lG~afQi~DDlld~~~~ 240 (342)
...++...+.||+-.+..+
T Consensus 216 ~~~~~i~RL~nDi~~~~~E 234 (328)
T d1n1ba2 216 CLAGIILRLPDDLGTSYFE 234 (328)
T ss_dssp HHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHhhhhhHHHH
Confidence 8899999999999999754
No 16
>d1rqja_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Escherichia coli [TaxId: 562]}
Probab=21.33 E-value=63 Score=26.66 Aligned_cols=55 Identities=13% Similarity=-0.034 Sum_probs=38.0
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCccccCCcccchhhccchHHHHHHHhh
Q 019339 203 ALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALEL 266 (342)
Q Consensus 203 ga~lag~~~~~~~~l~~~g~~lG~afQi~DDlld~~~~~~~~GK~~~Dl~~gk~Tlp~l~al~~ 266 (342)
.+.+.|.+++.+..+...-+-+=.|.=|.||+.|.-. +++|+|++|+-..++...
T Consensus 55 ~~~~~g~~~~~~~~~A~aiEllH~asLiHDDI~d~d~---------~~~RRG~pt~h~~~G~~~ 109 (299)
T d1rqja_ 55 TGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDD---------DDLRRGLPTCHVKFGEAN 109 (299)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTSTTTTC---------CCEETTEECHHHHHCHHH
T ss_pred HHHHcCCcchhHHHHHHHHHHHHHHHHHHccchhhhh---------hhcccccccceeeeCcch
Confidence 4445566666666666666667777889999998643 367888888877665544
Done!