BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019340
(342 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94C27|FB84_ARATH F-box protein At1g70590 OS=Arabidopsis thaliana GN=At1g70590 PE=2
SV=1
Length = 351
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/348 (62%), Positives = 262/348 (75%), Gaps = 9/348 (2%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELT----ASARKARIKRRSRFSCSRSIKST 56
MKQRTWP RS GSRF++L F ++R ++ A+A+ R S S S S
Sbjct: 1 MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSN 60
Query: 57 EGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG 116
E DF+ LP+D+L KIAA F+ P L+AASLVCKSW DAL+PLRE+M+L+RWGK++KHGRG
Sbjct: 61 EFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRG 120
Query: 117 -VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNL 175
VR NLDKALDSFLKGA RGSTLAMVDAGL+YWE +KE A++LYR+A+ LGD GQ NL
Sbjct: 121 GVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNL 180
Query: 176 GISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 235
GI+YLQ QP+N +EA+K L Q++ G+VRAQYQLALCLH GR V NL EA +WYL+AAE
Sbjct: 181 GIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQTNLLEATKWYLKAAE 240
Query: 236 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 295
GGYVRAMYN SLCYS GEGLP + + ARKWMKRAAD GH KAQ EHGL LF+EGEM+K+V
Sbjct: 241 GGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGHSKAQFEHGLALFSEGEMLKSV 300
Query: 296 VYLELATRAGETAADHVKNVILQQLSAT----SRDRAMLVVDSWRAMP 339
+YLELA R GE AA VK V+ QQLSAT + A+ ++WR +P
Sbjct: 301 LYLELAERGGEAAATPVKEVVHQQLSATFGGQAVHHAIHQANNWRPLP 348
>sp|Q9ESM7|SE1L1_MESAU Protein sel-1 homolog 1 OS=Mesocricetus auratus GN=Sel1l PE=2 SV=1
Length = 794
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 9/218 (4%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 226
P GQ LG++YL + N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 227 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 286
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 287 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 323
+G+ AVV YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 86/198 (43%), Gaps = 24/198 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+ ++ YR
Sbjct: 262 GFLYVSGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESVLTHYR-- 319
Query: 164 AVLGDPAGQFNL-GISYLQ------------AQPANAEEAVKLLYQ-ASIAGHVRAQYQL 209
V A +L G S +Q EE + YQ + G V+AQ L
Sbjct: 320 LVANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGL 379
Query: 210 A-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMK 267
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K
Sbjct: 380 GQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFK 439
Query: 268 RAADCGHGKAQLEHGLGL 285
+AAD G+ Q GLG+
Sbjct: 440 KAADMGNPVGQ--SGLGM 455
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 48/130 (36%), Gaps = 30/130 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRG++ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 227
+ ++A+K AS GH+ A Y LA G GV + A
Sbjct: 502 ------------------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAV 543
Query: 228 RWYLRAAEGG 237
+ E G
Sbjct: 544 ELFKNVCERG 553
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 88 CKSWNDAL--RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM--VDA 143
C++ DA R ++EA ++ + G + +G + +A K A T A+ V
Sbjct: 168 CETEEDAAKRRQMQEAEMIYQAGMKILNGSNRKSQKREAYRYLQKAAGMNHTKALERVSY 227
Query: 144 GLMY--WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLY 195
L++ + +AA ++ + G P GQ LG Y+ N+ +A L+Y
Sbjct: 228 ALLFGDYLTQNIQAAKEMFEKLTEEGSPKGQTALGFLYVSGLGVNSSQAKALVY 281
>sp|Q9UBV2|SE1L1_HUMAN Protein sel-1 homolog 1 OS=Homo sapiens GN=SEL1L PE=1 SV=3
Length = 794
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 8/213 (3%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 226
P GQ LG++YL + N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 227 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 286
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 287 TEGEMMKAVV-YLELATRAGETAADHVKNVILQ 318
+G+ AV+ YL LA + E A + ++ Q
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAAFILDQ 599
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYR-- 319
Query: 164 AVLGDPAGQFNL-GISYLQ------------AQPANAEEAVKLLYQ-ASIAGHVRAQYQL 209
V A +L G S +Q EE + YQ + G V+AQ L
Sbjct: 320 LVANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGL 379
Query: 210 A-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMK 267
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K
Sbjct: 380 GQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFK 439
Query: 268 RAADCGHGKAQLEHGLGL 285
+AAD G+ Q GLG+
Sbjct: 440 KAADMGNPVGQ--SGLGM 455
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 48/130 (36%), Gaps = 30/130 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 227
+ ++A+K AS GH+ A Y LA G GV + A
Sbjct: 502 ------------------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAV 543
Query: 228 RWYLRAAEGG 237
+ E G
Sbjct: 544 ELFKNVCERG 553
>sp|Q80Z70|SE1L1_RAT Protein sel-1 homolog 1 OS=Rattus norvegicus GN=Sel1l PE=2 SV=2
Length = 794
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 9/218 (4%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 226
P GQ LG++YL + N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 227 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 286
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 287 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 323
+ + AVV YL LA + E A + IL Q AT
Sbjct: 567 KDDDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYR-- 319
Query: 164 AVLGDPAGQFNL-GISYLQ------------AQPANAEEAVKLLYQ-ASIAGHVRAQYQL 209
V A +L G S +Q EE + YQ + G V+AQ L
Sbjct: 320 LVANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGL 379
Query: 210 A-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMK 267
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K
Sbjct: 380 GQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFK 439
Query: 268 RAADCGHGKAQLEHGLGL 285
+AAD G+ Q GLG+
Sbjct: 440 KAADMGNPVGQ--SGLGM 455
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 48/130 (36%), Gaps = 30/130 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 227
+ ++A+K AS GH+ A Y LA G GV + A
Sbjct: 502 ------------------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAV 543
Query: 228 RWYLRAAEGG 237
+ E G
Sbjct: 544 ELFKNVCERG 553
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Query: 88 CKSWNDAL--RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAA---RGSTLAMVD 142
C++ DA R ++EA + + G + +G RKN + +L+ AA L V
Sbjct: 168 CETEEDAAKRRQMQEAEAIYQSGMKILNGS-TRKNQKREAYRYLQKAAGMNHTKALERVS 226
Query: 143 AGLMY--WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQ--AS 198
L++ + +AA ++ + G P GQ LG Y N+ +A L+Y +
Sbjct: 227 YALLFGDYLTQNIQAAKEMFEKLTEEGSPKGQTGLGFLYASGLGVNSSQAKALVYYTFGA 286
Query: 199 IAGHVRAQYQLALCLHRGRGV 219
+ G++ A L G GV
Sbjct: 287 LGGNLIAHMVLGYRYWAGIGV 307
>sp|Q9Z2G6|SE1L1_MOUSE Protein sel-1 homolog 1 OS=Mus musculus GN=Sel1l PE=2 SV=2
Length = 790
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 9/218 (4%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 383 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 442
Query: 169 PAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 226
P GQ LG++YL + N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 443 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 502
Query: 227 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 286
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 503 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 562
Query: 287 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 323
+ + AVV YL LA + E A + IL Q AT
Sbjct: 563 KDEDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 599
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 258 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYR-- 315
Query: 164 AVLGDPAGQFNL-GISYLQ------------AQPANAEEAVKLLYQ-ASIAGHVRAQYQL 209
V A +L G S +Q EE + YQ + G V+AQ L
Sbjct: 316 LVANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGL 375
Query: 210 A-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMK 267
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K
Sbjct: 376 GQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFK 435
Query: 268 RAADCGHGKAQLEHGLGL 285
+AAD G+ Q GLG+
Sbjct: 436 KAADMGNPVGQ--SGLGM 451
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 48/130 (36%), Gaps = 30/130 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 450 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 497
Query: 168 DPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 227
+ ++A+K AS GH+ A Y LA G GV + A
Sbjct: 498 ------------------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAV 539
Query: 228 RWYLRAAEGG 237
+ E G
Sbjct: 540 ELFKNVCERG 549
Score = 31.6 bits (70), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 88 CKSWNDAL--RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM--VDA 143
C++ DA R ++EA ++ + G + +G + +A K A T A+ V
Sbjct: 164 CETEEDAAKRRQMQEAEMIYQAGMKILNGSNRKSQKREAYRYLQKAAGMNHTKALERVSY 223
Query: 144 GLMY--WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLY 195
L++ + +AA ++ + G P GQ LG Y N+ +A L+Y
Sbjct: 224 ALLFGDYLTQNIQAAKEMFEKLTEEGSPKGQTGLGFLYASGLGVNSSQAKALVY 277
>sp|Q3V172|SE1L2_MOUSE Protein sel-1 homolog 2 OS=Mus musculus GN=Sel1l2 PE=2 SV=1
Length = 688
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 7/211 (3%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGDP 169
+G+ ++ KAL FLK A GS AM G MY+E + A + AA G+
Sbjct: 312 KGLDQDYSKALYYFLKAAKAGSANAMAFIGKMYFEGNAAAPQNNATAFKYFSMAASKGNA 371
Query: 170 AGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 227
G LG+ Y + P N EA+K +A+ G AQ+QL + G GV + + A
Sbjct: 372 IGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAF 431
Query: 228 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 287
+++ A++ G A+Y + Y+ G G+ S R A + K + GH + +
Sbjct: 432 KYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCELGHWAEKFLTAYFAYK 491
Query: 288 EGEMMKAVVYLELATRAGETAADHVKNVILQ 318
+G++ +++ L G A IL+
Sbjct: 492 DGDIDSSLIQYALLAEMGYEVAQSNSAFILE 522
Score = 38.1 bits (87), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 58/255 (22%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGD 168
+G G+ + KAL + G+A GS ++ + G Y + E A++ Y++ A
Sbjct: 191 YGIGMEYDQAKALIYYTFGSAGGSMMSQMILGYRYLSGINVLQNCEVALNHYKKVADYIA 250
Query: 169 PAGQFNLGISY----LQAQPANAEEAVKLL------YQASIA--GHVRAQYQLALCLHRG 216
+ + GI L +P N ++L Y +A G V+ Q L G
Sbjct: 251 DKLEKSEGIPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQVSLGQLHLIG 310
Query: 217 R-GVDFNLQEAARWYLRAAEGGYVRAM--------------------------------- 242
R G+D + +A ++L+AA+ G AM
Sbjct: 311 RKGLDQDYSKALYYFLKAAKAGSANAMAFIGKMYFEGNAAAPQNNATAFKYFSMAASKGN 370
Query: 243 ----YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK----A 294
+ L Y G+G+P+++ +A K+ ++AA+ G AQ + G ++ + K A
Sbjct: 371 AIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLA 430
Query: 295 VVYLELATRAGETAA 309
Y LA+++G+ A
Sbjct: 431 FKYFYLASQSGQPLA 445
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 12/148 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + HG+GV N +AL F K A +G A G MY+ L + L
Sbjct: 378 GLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLA 437
Query: 168 DPAGQFNLGISYLQAQPANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 220
+GQ L I YL A AV+L GH ++ A ++ +D
Sbjct: 438 SQSGQ-PLAIYYLAEMYATGTGVLRSCRTAVELYKGVCELGHWAEKFLTAYFAYKDGDID 496
Query: 221 FNLQEAARWYLRAAEGGYVRAMYNTSLC 248
+L + Y AE GY A N++
Sbjct: 497 SSLIQ----YALLAEMGYEVAQSNSAFI 520
>sp|Q9ZG88|PODJ_CAUCR Localization factor PodJL OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=podJ PE=1 SV=2
Length = 974
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 12/150 (8%)
Query: 191 VKLLYQASIAGHVRAQYQLALCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 249
V+LL +A+ G+ AQ+ L+ G+ GV ++ EA RW RAA GG RAM+N +L Y
Sbjct: 745 VELLKRAANGGYPAAQFYLSKMYEGGKNGVKVDMAEARRWSERAANGGDPRAMHNLALYY 804
Query: 250 SFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATR 303
GEG P + A W ++AAD G +Q E GLG+ +A + +A R
Sbjct: 805 FKGEGGPRNSTTAASWFRKAADMGLVDSQFNLAQLYESGLGVSQ--NPAEAYKWYVIAGR 862
Query: 304 AGETAADHVKNVILQQLSATSR---DRAML 330
AG++ A + QL+A ++ DR+ L
Sbjct: 863 AGDSTARGRATALRSQLTAEAQQTADRSAL 892
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQAQ---PANAEEAVKLLYQASIAGHVRAQYQLALCL 213
+ L ++AA G PA QF L Y + + EA + +A+ G RA + LAL
Sbjct: 745 VELLKRAANGGYPAAQFYLSKMYEGGKNGVKVDMAEARRWSERAANGGDPRAMHNLALYY 804
Query: 214 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 273
+G G N AA W+ +AA+ G V + +N + Y G G+ + +A KW A G
Sbjct: 805 FKGEGGPRNSTTAASWFRKAADMGLVDSQFNLAQLYESGLGVSQNPAEAYKWYVIAGRAG 864
Query: 274 HGKAQ 278
A+
Sbjct: 865 DSTAR 869
>sp|B8GXA0|PODJ_CAUCN Localization factor PodJL OS=Caulobacter crescentus (strain NA1000
/ CB15N) GN=podJ PE=2 SV=1
Length = 974
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 12/150 (8%)
Query: 191 VKLLYQASIAGHVRAQYQLALCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 249
V+LL +A+ G+ AQ+ L+ G+ GV ++ EA RW RAA GG RAM+N +L Y
Sbjct: 745 VELLKRAANGGYPAAQFYLSKMYEGGKNGVKVDMAEARRWSERAANGGDPRAMHNLALYY 804
Query: 250 SFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATR 303
GEG P + A W ++AAD G +Q E GLG+ +A + +A R
Sbjct: 805 FKGEGGPRNSTTAASWFRKAADMGLVDSQFNLAQLYESGLGVSQ--NPAEAYKWYVIAGR 862
Query: 304 AGETAADHVKNVILQQLSATSR---DRAML 330
AG++ A + QL+A ++ DR+ L
Sbjct: 863 AGDSTARGRATALRSQLTAEAQQTADRSAL 892
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQAQ---PANAEEAVKLLYQASIAGHVRAQYQLALCL 213
+ L ++AA G PA QF L Y + + EA + +A+ G RA + LAL
Sbjct: 745 VELLKRAANGGYPAAQFYLSKMYEGGKNGVKVDMAEARRWSERAANGGDPRAMHNLALYY 804
Query: 214 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 273
+G G N AA W+ +AA+ G V + +N + Y G G+ + +A KW A G
Sbjct: 805 FKGEGGPRNSTTAASWFRKAADMGLVDSQFNLAQLYESGLGVSQNPAEAYKWYVIAGRAG 864
Query: 274 HGKAQ 278
A+
Sbjct: 865 DSTAR 869
>sp|Q5TEA6|SE1L2_HUMAN Protein sel-1 homolog 2 OS=Homo sapiens GN=SEL1L2 PE=1 SV=2
Length = 688
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 7/220 (3%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGDP 169
+G+ ++ KAL FLK A GS AM G MY E + A + AA G+
Sbjct: 312 KGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNA 371
Query: 170 AGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 227
G LG+ Y + P N EA+K +A+ G AQ+QL + G G+ + + A
Sbjct: 372 IGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAF 431
Query: 228 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 287
+++ A++ G A+Y + Y+ G G+ S R A + K + GH + +
Sbjct: 432 KYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHWAEKFLTAYFAYK 491
Query: 288 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 327
+G++ ++V L G A IL+ A ++
Sbjct: 492 DGDIDSSLVQYALLAEMGYEVAQSNSAFILESKKANILEK 531
>sp|P77234|YBEQ_ECOLI Uncharacterized protein YbeQ OS=Escherichia coli (strain K12)
GN=ybeQ PE=4 SV=2
Length = 325
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 10/173 (5%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G+++ + K+ ++A+ K A +G T A G W +D+ EA A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALG---WTLDRGEAPNYKEAVVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQAQPANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 220
AA G Q NLG Y + A+ + QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 221 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 273
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNLGISYLQAQPANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 228
Q NL Y + + + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 229 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 277
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + K A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQAQPANAE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 221
A G+ QF + Y + + + +A+ +A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 258
Query: 222 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 262
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 201 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 259
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 23 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDN 82
Query: 260 RQARKWMKRAADCGHGKAQLEHGLGLFTEGE---MMKAVVYLELATRAGETAADHVKNVI 316
QA W+K+AA GH A G L GE +AVV+ ++A +G + A + +
Sbjct: 83 EQAIFWLKKAALQGHTFASNALGWTL-DRGEAPNYKEAVVWYQIAAESGMSYAQNNLGWM 141
Query: 317 LQQLSATSRDRAM 329
+ + ++D A+
Sbjct: 142 YRNGNGVAKDYAL 154
>sp|Q5XI05|SE1L2_RAT Protein sel-1 homolog 2 OS=Rattus norvegicus GN=Sel1l2 PE=2 SV=1
Length = 688
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 7/211 (3%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGDP 169
+G+ ++ KAL FLK A GS AM G MY E + A + AA G+
Sbjct: 312 KGLDQDYSKALYYFLKAAKAGSANAMAFIGKMYLEGNAAAPQNNATAFKYFSMAASKGNA 371
Query: 170 AGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 227
G LG+ Y + P N EA+K +A+ G AQ+ L + G GV + + A
Sbjct: 372 IGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFHLGFMYYSGSGVWKDYKLAF 431
Query: 228 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 287
+++ A++ G A+Y + Y+ G G+ S R A + K + GH + +
Sbjct: 432 KYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVEPYKGVCELGHWAEKFLTAYFAYK 491
Query: 288 EGEMMKAVVYLELATRAGETAADHVKNVILQ 318
+G++ +++ L G A IL+
Sbjct: 492 DGDVDSSLIQYALLAEMGYEVAQSNSAFILE 522
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 58/255 (22%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGD 168
+G G+ + KAL + G+A GS ++ + G Y + E A++ Y++ A
Sbjct: 191 YGIGMEYDQAKALIYYTFGSAGGSMMSQMILGYRYLSGINVLQNCEVALNHYKKVADYIA 250
Query: 169 PAGQFNLGISY----LQAQPANAEEAVKLL------YQASIA--GHVRAQYQLALCLHRG 216
+ + GI L +P N ++L Y +A G V+ Q L G
Sbjct: 251 DKLEKSEGIPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQVSLGQLHLIG 310
Query: 217 R-GVDFNLQEAARWYLRAAEGGYVRAM--------------------------------- 242
R G+D + +A ++L+AA+ G AM
Sbjct: 311 RKGLDQDYSKALYYFLKAAKAGSANAMAFIGKMYLEGNAAAPQNNATAFKYFSMAASKGN 370
Query: 243 ----YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK----A 294
+ L Y G+G+P+++ +A K+ ++AA+ G AQ G ++ + K A
Sbjct: 371 AIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFHLGFMYYSGSGVWKDYKLA 430
Query: 295 VVYLELATRAGETAA 309
Y LA+++G+ A
Sbjct: 431 FKYFYLASQSGQPLA 445
>sp|Q5UP97|YL021_MIMIV Putative sel1-like repeat-containing protein L21 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L21 PE=4 SV=1
Length = 533
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G G ++KA + A +G + A + G Y+ K E +I+ ++++A G
Sbjct: 112 GFMYEEGIGTEIKINKAKMWYTLSANQGLSFAQYNLGYYYYNKAKYEKSINYFQKSAQSG 171
Query: 168 DPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 227
F L +YL+ N EA+K A+ G +QY+L + G+ V+ ++ +A
Sbjct: 172 YYLSNFMLAETYLKLSIPNFNEAIKNYLLAANQGCNISQYRLGMIYFEGKYVNTDMNQAY 231
Query: 228 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 278
+W+ +A+ G + Y Y + + ++A ++A+CGH AQ
Sbjct: 232 KWFKLSAKQGNYFSQYGLGRVYYSMDSTKYNCQKAINCFIKSANCGHIYAQ 282
>sp|Q14154|DELE_HUMAN Death ligand signal enhancer OS=Homo sapiens GN=KIAA0141 PE=1 SV=3
Length = 515
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLA-------MVDAGLMYWEMDKKEAAISLYRQAA 164
+HGRG +++ KA+ + A++G +LA ++ W +++ A +SL +QAA
Sbjct: 288 EHGRGTPRDISKAVLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRA-VSLLKQAA 346
Query: 165 VLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 224
G Q LG+ + + + + AVK L+ A+ G +++Y L +C +G GV NL
Sbjct: 347 DSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLG 406
Query: 225 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 256
EA R Y ++A G A +S G P
Sbjct: 407 EALRCYQQSAALGNEAAQERLRALFSMGAAAP 438
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 190 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 249
A +A+ G+ +AQY LC GRG ++ +A +Y AA G+ A Y + C
Sbjct: 264 AFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRYARCL 323
Query: 250 --SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM---KAVVYLELATRA 304
++A +K+AAD G +AQ G+ LFT+ + +AV YL LA
Sbjct: 324 LRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGV-LFTKEPYLDEQRAVKYLWLAANN 382
Query: 305 GET 307
G++
Sbjct: 383 GDS 385
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 226 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 285
A ++ +AA GY +A YN LC+ G G P +A + + AA GH AQ + L
Sbjct: 264 AFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRYARCL 323
Query: 286 FTE------GEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 329
+ E +AV L+ A +G A V+ + RA+
Sbjct: 324 LRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAV 373
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQ-ASIAGHVRAQYQLAL 211
AA S +++AA G Q+N G+ + + P + +AV L YQ A+ GH AQY+ A
Sbjct: 263 AAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAV-LYYQLAASQGHSLAQYRYAR 321
Query: 212 CLHRGRGVDFNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 269
CL R +N Q A +AA+ G A L F + L ++A K++ A
Sbjct: 322 CLLRDPASSWNPERQRAVSLLKQAADSGLREA--QAFLGVLFTKEPYLDEQRAVKYLWLA 379
Query: 270 ADCGHGKAQLEHGLGLFTE 288
A+ +G +Q + LG+ E
Sbjct: 380 AN--NGDSQSRYHLGICYE 396
>sp|P77296|YBET_ECOLI Uncharacterized protein YbeT OS=Escherichia coli (strain K12)
GN=ybeT PE=4 SV=1
Length = 184
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 163 AAVLGDPAGQFNLGISYLQA---QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 219
+A+ G Q+ LG YL +P + +A Q++ + RAQ +L +G GV
Sbjct: 57 SAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGV 116
Query: 220 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 278
+ ++A WY AAE GY A Y L Y G G+ ++H +++KW+K A + A+
Sbjct: 117 KPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLTAKQHYKNAE 175
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 197 ASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 255
++I GH +QY+L LH G + +A WY ++AE RA Y G G+
Sbjct: 57 SAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGV 116
Query: 256 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKN 314
R+A W K AA+ G+ AQ GL ++ G + V + E TA H KN
Sbjct: 117 KPDTRKAILWYKEAAEQGYAHAQYTLGL-IYRNGSGIN-VNHYESQKWLKLTAKQHYKN 173
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 160 YRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGR 217
Y Q+A +P Q LG YL+ + +L+ +A+ G+ AQY L L G
Sbjct: 91 YEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGS 150
Query: 218 GVDFNLQEAARWYLRAAEGGYVRA 241
G++ N E+ +W A+ Y A
Sbjct: 151 GINVNHYESQKWLKLTAKQHYKNA 174
>sp|Q9DCV6|DELE_MOUSE Death ligand signal enhancer OS=Mus musculus GN=Kiaa0141 PE=2 SV=1
Length = 510
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 12/150 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD------KKEAAISLYR 161
G +HGRG ++L KA+ + A +G +LA + ++E A+SL +
Sbjct: 285 GLCLEHGRGTPRDLSKAILFYHLAAVQGHSLAQYRYARCLLQSPGSLSDPERERAVSLLK 344
Query: 162 QAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 221
QAA G Q LG+ + + + + AVK L+ A+ G ++++ L +C +G G
Sbjct: 345 QAADSGLTEAQAFLGVLFTKEPHLDEQRAVKYLWLAASNGDSQSRFHLGICYEKGLGAQR 404
Query: 222 NLQEAARWYLRAAEGGY------VRAMYNT 245
NL EA + Y +AA G +R ++N
Sbjct: 405 NLGEAVKCYQQAAAMGNEPARERLRTLFNV 434
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 190 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 249
A +A+ G+ +AQY + LCL GRG +L +A +Y AA G+ A Y + C
Sbjct: 265 AFSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSKAILFYHLAAVQGHSLAQYRYARCL 324
Query: 250 --SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM---KAVVYLELATRA 304
S G +A +K+AAD G +AQ G+ LFT+ + +AV YL LA
Sbjct: 325 LQSPGSLSDPERERAVSLLKQAADSGLTEAQAFLGV-LFTKEPHLDEQRAVKYLWLAASN 383
Query: 305 GET 307
G++
Sbjct: 384 GDS 386
>sp|P60924|DELE_RAT Death ligand signal enhancer OS=Rattus norvegicus GN=Dele PE=2 SV=1
Length = 509
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 16/152 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLA--------MVDAGLMYWEMDKKEAAISL 159
G +HGRG ++L KA+ + A +G +LA + G M +++ A+SL
Sbjct: 285 GLCLEHGRGTPRDLSKAVLFYHLAAVQGHSLAQYRYARCLLQSPGSM--SDPERQRAVSL 342
Query: 160 YRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 219
+QAA G Q LG+ + + + ++AVK + A+ G ++++ L +C +G GV
Sbjct: 343 LKQAADSGLTEAQAFLGVLFTKEPHLDEQKAVKYFWLAASNGDSQSRFHLGICYEKGLGV 402
Query: 220 DFNLQEAARWYLRAAEGGY------VRAMYNT 245
NL EA + Y ++A G +R ++N
Sbjct: 403 QRNLGEAVKCYQKSAAMGNEPAQERLRTLFNV 434
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 190 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 249
A +A+ G+ +AQY + LCL GRG +L +A +Y AA G+ A Y + C
Sbjct: 265 AFSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSKAVLFYHLAAVQGHSLAQYRYARCL 324
Query: 250 --SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM---KAVVYLELATRA 304
S G ++A +K+AAD G +AQ G+ LFT+ + KAV Y LA
Sbjct: 325 LQSPGSMSDPERQRAVSLLKQAADSGLTEAQAFLGV-LFTKEPHLDEQKAVKYFWLAASN 383
Query: 305 GET 307
G++
Sbjct: 384 GDS 386
>sp|O94486|CHR2_SCHPO Chitin synthase regulatory factor 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=chr2 PE=3 SV=1
Length = 512
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 186 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 245
N +EA +L A+ HV+A Y++A+CL G GV N +EA ++ RAA G +V AM+
Sbjct: 244 NEKEAYRLYKMAADLNHVQAAYRVAICLQMGFGVTQNTEEAIHYFFRAASGQHVGAMHRM 303
Query: 246 SLCY 249
+L Y
Sbjct: 304 ALIY 307
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 SIAGHVRAQYQLALCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 256
S G+ A Y LA+C G + N +EA R Y AA+ +V+A Y ++C G G+
Sbjct: 219 SFFGYSEALYLLAVCYGTGALRTEINEKEAYRLYKMAADLNHVQAAYRVAICLQMGFGVT 278
Query: 257 LSHRQARKWMKRAADCGHGKAQLEHGLGLF-----TEGEMMKAVVYLELATRAGETAADH 311
+ +A + RAA H A L F + + +KA+ YL L G ADH
Sbjct: 279 QNTEEAIHYFFRAASGQHVGAMHRMALIYFRGLMSVKRDPVKAMYYLNL----GALEADH 334
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 18/179 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAAISLY---------- 160
G GV +N ++A+ F + A+ AM L+Y+ K++ ++Y
Sbjct: 274 GFGVTQNTEEAIHYFFRAASGQHVGAMHRMALIYFRGLMSVKRDPVKAMYYLNLGALEAD 333
Query: 161 -RQAAVLGDPAGQFNLGISYLQAQ-PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR- 217
L D A + G SYL + +A L + A+ G AQ ++A C G+
Sbjct: 334 HEFPQALYDLAELYEHGSSYLDGLLELSPRKAFVLYHIAAKYGLKDAQLRVARCFELGQL 393
Query: 218 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG--EGLPLSHRQARKWMKRAADCGH 274
D NL + WY R A AM+ S Y G + + + A +W K AA H
Sbjct: 394 ECDINLVRSFVWYRRLARKRNPEAMWKLSQFYLNGVDDVIYPNPELANEWAKAAAYKNH 452
>sp|Q80TS8|SE1L3_MOUSE Protein sel-1 homolog 3 OS=Mus musculus GN=Sel1l3 PE=2 SV=3
Length = 1137
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 80/196 (40%), Gaps = 35/196 (17%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-AISLYRQAAVLGDPAGQ 172
G+GV+KN AL+ K A++G A+ G Y + K A A + +A +G+P
Sbjct: 745 GQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFRKNYAKAAKYWLKAEEMGNPDAS 804
Query: 173 FNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 232
+NLG+ YL GR NL A ++ +
Sbjct: 805 YNLGVLYLDGIFPGVP---------------------------GR----NLTLAGEYFHK 833
Query: 233 AAEGGYVRAMYNTSLCYSFG--EGLPLSHRQARKWMKRAAD-CGHGKAQLEHGLGLFTEG 289
AA+GG++ SL Y G E P +A W K A+ G+ + GL + EG
Sbjct: 834 AAQGGHIEGTLWCSLYYITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKGLNAYLEG 893
Query: 290 EMMKAVVYLELATRAG 305
+A++Y LA G
Sbjct: 894 LWHEALLYYVLAAETG 909
>sp|Q5UP92|YL018_MIMIV Putative sel1-like repeat-containing protein L18 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L18 PE=4 SV=1
Length = 584
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 10/145 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-------WEMDK 152
++M G+ + G +KN+ KA+ K A + + +++ Y ++DK
Sbjct: 131 DSMAQYNLGQMYYRGISTKKNIQKAIKWITKSADQNNKYGLINLARFYEYGDGVLLDIDK 190
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALC 212
A L QA+ QF LG Y+ P + + A K QA+ H AQY +A+
Sbjct: 191 ---ATQLLEQASCQNFSKAQFYLGRIYMYKDPPDYKLAFKYYQQAANQNHSSAQYFIAVF 247
Query: 213 LHRGRGVDFNLQEAARWYLRAAEGG 237
G+ V + ++A W AA G
Sbjct: 248 YKTGKCVAQDYKKAVHWLTLAASQG 272
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 189 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 248
E VKL A+ G AQY L +RG N+Q+A +W ++A+ + N +
Sbjct: 121 ENVKL---AAKTGDSMAQYNLGQMYYRGISTKKNIQKAIKWITKSADQNNKYGLINLARF 177
Query: 249 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 282
Y +G+G+ L +A + +++A+ KAQ G
Sbjct: 178 YEYGDGVLLDIDKATQLLEQASCQNFSKAQFYLG 211
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 131 GAARGSTLAMVDAGLMYWE--MDKK--EAAISLYRQAAVLGDPAGQFNLG--ISYLQAQP 184
A G ++A + G MY+ KK + AI ++A + G NL Y
Sbjct: 126 AAKTGDSMAQYNLGQMYYRGISTKKNIQKAIKWITKSADQNNKYGLINLARFYEYGDGVL 185
Query: 185 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 244
+ ++A +LL QAS +AQ+ L D+ L A ++Y +AA + A Y
Sbjct: 186 LDIDKATQLLEQASCQNFSKAQFYLGRIYMYKDPPDYKL--AFKYYQQAANQNHSSAQYF 243
Query: 245 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 280
++ Y G+ + +++A W+ AA G A+++
Sbjct: 244 IAVFYKTGKCVAQDYKKAVHWLTLAASQGLNSAKIK 279
>sp|Q68CR1|SE1L3_HUMAN Protein sel-1 homolog 3 OS=Homo sapiens GN=SEL1L3 PE=1 SV=2
Length = 1132
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV-DAGLMYWE----MDKKEAAIS 158
+L WG++ GV KN + A++ + KGA A++ D ++ ++ + A+
Sbjct: 698 MLFWGQQ-----GVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALE 752
Query: 159 LYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG-- 216
L ++AA G LG Y + + N +A K +A G+ A Y L + G
Sbjct: 753 LMKKAASKGLHQAVNGLGWYYHKFK-KNYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIF 811
Query: 217 RGVDF-NLQEAARWYLRAAEGGYVRAMYNTSLCYSFG--EGLPLSHRQARKWMKRAAD-C 272
GV N A ++ +AA+GG++ SL Y G E P +A W K A+
Sbjct: 812 PGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLETFPRDPEKAVVWAKHVAEKN 871
Query: 273 GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG 305
G+ + GL + EG +A++Y LA G
Sbjct: 872 GYLGHVIRKGLNAYLEGSWHEALLYYVLAAETG 904
>sp|Q9JZ25|Y1327_NEIMB Uncharacterized protein NMB1327 OS=Neisseria meningitidis serogroup
B (strain MC58) GN=NMB1327 PE=1 SV=1
Length = 467
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLA----MVDAGLMYWEM--DKKEAAISLYR 161
G ++G G+ + +KA + + A GS A + D+ L + + K++AI R
Sbjct: 283 GDICRYGLGIAPDTEKARHYYRQAAEAGSLSAYQKLISDSALNHPDQYGGIKDSAIRRQR 342
Query: 162 QAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 221
A L A + G LQ P A A+KL +A+ GH +AQ L + G+G+
Sbjct: 343 -AERLYQKAQALHYG---LQCAPEYAA-ALKLYTEAAELGHSKAQTNLGSMYYFGQGMTA 397
Query: 222 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 276
+ EA +W+ +AA A YN + + G G+ +A ++++ A + G+G+
Sbjct: 398 DYNEARKWFEKAAAKKDSMAFYNLACIHYSGHGVEPDKEKACRYLQEAINNGYGQ 452
Score = 35.4 bits (80), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCL 213
E I LYR A G P Q L YL + EEA++ ++ + QY LA
Sbjct: 92 ETLIPLYRPLAEEGLPEAQVRL--MYLLYASRHFEEALEWAKTSAKNNNPHGQYLLAQYC 149
Query: 214 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 273
G DF + A Y ++A G A + L Y FG+G + QA ++ AA G
Sbjct: 150 RYGTPPDF--ETAHLLYRKSAAQGLPEAHWQLGLQYRFGQGTKVDTAQAVNHLRAAAQQG 207
Query: 274 H 274
+
Sbjct: 208 Y 208
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIA-GHVRAQYQLALC 212
E A+ + +A +P GQ+ L P + E A LLY+ S A G A +QL L
Sbjct: 124 EEALEWAKTSAKNNNPHGQYLLAQYCRYGTPPDFETA-HLLYRKSAAQGLPEAHWQLGLQ 182
Query: 213 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 270
G+G + +A AA+ GY+ A T L LP + +A W ++AA
Sbjct: 183 YRFGQGTKVDTAQAVNHLRAAAQQGYIPAY--TPLAELI---LPTAPDEAVHWFQQAA 235
>sp|Q09897|CHR3_SCHPO Chitin synthase regulatory factor 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=chr3 PE=1 SV=1
Length = 932
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 171 GQFNLGIS--YLQAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 224
G+ LG+S YL P N EEA+ ++A+ G +AQY + + +G GV +
Sbjct: 826 GEAELGLSGWYLTGSEGILPKNGEEALLWAHKAACKGLAKAQYAVGFMMEQGIGVAADPS 885
Query: 225 EAARWYLRAAEGGYVRA 241
A WY+RAA+ G+ +A
Sbjct: 886 SAHNWYIRAAKQGFPKA 902
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 189 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 248
+A +L A+ GH + Y++A+CL G GV + + Y +AAE V AM+ +L
Sbjct: 661 KAFELYSLAAKKGHPLSNYRVAVCLQTGTGVKPDTSKCVAIYKKAAEMDVVEAMFRIALI 720
Query: 249 YSFG 252
Y G
Sbjct: 721 YLNG 724
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 62/165 (37%), Gaps = 11/165 (6%)
Query: 125 LDSFLKGAARGSTLAMVDAGLMYWEMDK------KEAAISLYRQAAVLGDPAGQFNLGIS 178
L+ K S AM + +Y + D+ E LY+Q+AV G A Q LG
Sbjct: 739 LERACKSKGPESVRAMYELAKIYEQPDRYGVSATPERKFELYKQSAVYGYAAAQCKLGEC 798
Query: 179 YLQAQPAN-AEEAVKLLYQASIAGHVRAQYQLALC---LHRGRGV-DFNLQEAARWYLRA 233
Y AE + + A + +L L L G+ N +EA W +A
Sbjct: 799 YEHGLLGCLAEPRRSIFWYTRAAEQDYGEAELGLSGWYLTGSEGILPKNGEEALLWAHKA 858
Query: 234 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 278
A G +A Y G G+ A W RAA G KA+
Sbjct: 859 ACKGLAKAQYAVGFMMEQGIGVAADPSSAHNWYIRAAKQGFPKAK 903
>sp|Q4R3N2|LR2BP_MACFA LRP2-binding protein OS=Macaca fascicularis GN=LRP2BP PE=2 SV=1
Length = 348
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL 180
+DKAL K +G TLA G +Y+E E A+ + + D + LG+ Y
Sbjct: 44 VDKALQLLKKRILKGDTLAYFLRGQLYFEEGWYEEALEQFEEIEE-KDHQATYQLGVMYY 102
Query: 181 QAQPA--NAEEAVKLLYQ-----ASIAGHVR--AQYQLALCLHRGRGVDFNLQEAARWYL 231
N+E+ V + + A H++ A Y L + G+GV + +EA R +L
Sbjct: 103 DGLGTILNSEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWL 162
Query: 232 RAAEGGY----VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 285
AA+ G V+A L YS E P +A W A CG+G + + LGL
Sbjct: 163 FAADNGNPKASVKAQSMLGLYYSTKE--PKELEKAFYWHSEA--CGNGNLESQGALGL 216
>sp|P44277|Y1625_HAEIN Uncharacterized protein HI_1625 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1625 PE=4 SV=1
Length = 165
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%)
Query: 189 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 248
+ ++Y ++ G++ AQ L + + GRG + ++A W+ AAE G V+ + N +
Sbjct: 52 DVFNIMYPMALEGNITAQSNLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVM 111
Query: 249 YSFGEGLPLSHRQARKWMKRAADCGHGKAQL 279
Y G+ + + QA K +R A A +
Sbjct: 112 YLRGDYVKQNTEQAIKLFERTAQAKDTDAMM 142
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + GRG ++ +KA F + A +GS + + G+MY D E AI L+ +
Sbjct: 73 GMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLFERT 132
Query: 164 AVLGDPAGQFNLGISY-LQAQP 184
A D L Y LQ QP
Sbjct: 133 AQAKDTDAMMMLSNIYRLQNQP 154
>sp|Q52926|EXOR_RHIME Exopolysaccharide production negative regulator OS=Rhizobium
meliloti (strain 1021) GN=exoR PE=4 SV=1
Length = 268
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 16/180 (8%)
Query: 138 LAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLG--ISYLQAQPANAEEAVKLLY 195
A+ G ++ +K+ A+ YR AA G ++ L +Y N EA K+
Sbjct: 44 FALFKFGFSAYKSGRKDEAVEAYRYAAEKGHTGSRWALANMYAYGDGVAENDLEAFKIYS 103
Query: 196 QASIAG----------HVRAQYQLALCLHRG---RGVDFNLQEAARWYLRAAEG-GYVRA 241
+ + G V A LA RG V +L +A + Y +AA G A
Sbjct: 104 EIAQQGVEPGSEDTGYFVNALISLAGYYRRGIPDTPVRSDLSQARQLYFQAASTFGVAEA 163
Query: 242 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELA 301
+ + GEG ++ +QA+KW+ RA GH A G +F EG+ + + Y+ A
Sbjct: 164 QFQLARMLLSGEGGSVNVQQAKKWLNRARKNGHAGAMGVFGNVIFQEGQTARGLAYMTAA 223
>sp|P34226|SKT5_YEAST Protein SKT5 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SKT5 PE=1 SV=1
Length = 696
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYL-QAQPA---NAEEAVKLLYQASIAGHVRAQYQLAL 211
++ Y QAA+ GD L YL A+PA + EA + +A+ AG +AQ+ L
Sbjct: 448 SVHYYTQAALKGDSVAMLGLCAWYLLGAEPAFEKDENEAFQWALRAANAGLPKAQFTLGY 507
Query: 212 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 242
G+G D N++ A +WY +AA RA+
Sbjct: 508 FYEHGKGCDRNMEYAWKWYEKAAGNEDKRAI 538
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCL 213
+ A+++ A++ D + N+ S L+ Q +EA L + SI G+ AQY LA
Sbjct: 224 QTALTIESSNALVQDSDKEGNVSQSDLKLQ--FLKEAQSYLKKLSIKGYSDAQYLLADGY 281
Query: 214 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 273
G +EA + AA+ G++ + Y S C G G R++ ++K AA
Sbjct: 282 SSGAFGKIENKEAFVLFQAAAKHGHIESAYRASHCLEEGLGTTRDSRKSVNFLKFAASRN 341
Query: 274 HGKAQLEHGLGLF 286
H A + GL F
Sbjct: 342 HPSAMYKLGLYSF 354
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 188 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 247
+EA L A+ GH+ + Y+ + CL G G + +++ + AA + AMY L
Sbjct: 292 KEAFVLFQAAAKHGHIESAYRASHCLEEGLGTTRDSRKSVNFLKFAASRNHPSAMYKLGL 351
Query: 248 CYSFGE-GLPL---SHRQARKWMKRAA 270
+G GLP + KW+ RAA
Sbjct: 352 YSFYGRMGLPTDVNTKLNGVKWLSRAA 378
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 9/134 (6%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAEE---AVKLLYQASIA 200
G + + ++ A+ LY QAA LG L Y ++ +V QA++
Sbjct: 399 GFLDVVIPDEKYAMELYIQAASLGHVPSATLLAQIYETGNDTVGQDTSLSVHYYTQAALK 458
Query: 201 GHVRAQYQLALC----LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 256
G A L LC L + + EA +W LRAA G +A + Y G+G
Sbjct: 459 GDSVAM--LGLCAWYLLGAEPAFEKDENEAFQWALRAANAGLPKAQFTLGYFYEHGKGCD 516
Query: 257 LSHRQARKWMKRAA 270
+ A KW ++AA
Sbjct: 517 RNMEYAWKWYEKAA 530
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 190 AVKLLYQASIAGHVRAQYQLALCLHRGR---GVDFNLQEAARWYLRAAEGGYVRAMYNTS 246
A++L QA+ GHV + LA G G D +L + +Y +AA G AM
Sbjct: 411 AMELYIQAASLGHVPSATLLAQIYETGNDTVGQDTSL--SVHYYTQAALKGDSVAMLGLC 468
Query: 247 LCYSFG--EGLPLSHRQARKWMKRAADCGHGKAQL------EHGLG 284
Y G +A +W RAA+ G KAQ EHG G
Sbjct: 469 AWYLLGAEPAFEKDENEAFQWALRAANAGLPKAQFTLGYFYEHGKG 514
>sp|Q9P2M1|LR2BP_HUMAN LRP2-binding protein OS=Homo sapiens GN=LRP2BP PE=1 SV=2
Length = 347
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL 180
+DKAL + +G TLA G +Y+E E A+ + + D + LG+ Y
Sbjct: 43 VDKALQLLKERILKGDTLAYFLRGQLYFEEGWYEEALEQFEEIKE-KDHQATYQLGVMYY 101
Query: 181 Q--AQPANAEEAVKLLYQ-----ASIAGHVR--AQYQLALCLHRGRGVDFNLQEAARWYL 231
+AE+ V + + A H++ A Y L + G+GV + +EA R +L
Sbjct: 102 DGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWL 161
Query: 232 RAAEGGY----VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 285
AA+ G V+A L YS E P +A W A CG+G + + LGL
Sbjct: 162 IAADNGNPKASVKAQSMLGLYYSTKE--PKELEKAFYWHSEA--CGNGNLESQGALGL 215
>sp|Q5UQH0|YR815_MIMIV Putative sel1-like repeat-containing protein R815 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R815 PE=4 SV=1
Length = 540
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 8/172 (4%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLY 160
+G ++G GV+KN+ KA+ + + + ++ G +Y DK A +LY
Sbjct: 134 NYGLVNEYGIGVKKNIKKAIKWYKLSCYKENLFGLLFLGSLYERGYGVSCDK-HMAFNLY 192
Query: 161 RQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 218
+A PA + L Y N ++ +L +A+ G+ AQY LAL G G
Sbjct: 193 EKATKHNYPAVKRQLAFMYRTGSGTTKNINKSHELYREAANQGYPLAQYALALQCKYGHG 252
Query: 219 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 270
N +EA W +R+ G + A Y+ + Y + ++ +A + M+ AA
Sbjct: 253 CIKNYKEAETWLIRSYNNGCLYATYSLARLYIETKSPLRNYSRAFELMQEAA 304
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL---- 166
++ G G KN++K+ + + + A +G LA L + I Y++A
Sbjct: 211 YRTGSGTTKNINKSHELYREAANQGYPLAQYALAL---QCKYGHGCIKNYKEAETWLIRS 267
Query: 167 ---GDPAGQFNLGISYLQAQPA--NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 221
G ++L Y++ + N A +L+ +A+ ++ A LA G GV+
Sbjct: 268 YNNGCLYATYSLARLYIETKSPLRNYSRAFELMQEAASENYLLAINYLAKIYKNGIGVNK 327
Query: 222 NLQEAARWYLRAAEG 236
N+ A WY +A
Sbjct: 328 NISRAIYWYYKAGNS 342
>sp|Q9ZMJ9|HCPE_HELPJ Putative beta-lactamase HcpE OS=Helicobacter pylori (strain J99)
GN=hcpE PE=3 SV=1
Length = 355
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 97 PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
+ A+ R G + G V K+L KALD++ +G G + MY+ M KE A
Sbjct: 271 DMGSAVSCSRMGFMYSQGDTVSKDLRKALDNYERGCDMGDEVGCFALAGMYYNMKDKENA 330
Query: 157 ISLYRQAAVLG 167
I +Y + LG
Sbjct: 331 IMIYDKGCKLG 341
Score = 32.3 bits (72), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G + GR V+K+ KA + F + GS ++ G MY + D A+ Y +
Sbjct: 246 GSMYMLGRYVKKDPQKAFNYFKQACDMGSAVSCSRMGFMYSQGDTVSKDLRKALDNYERG 305
Query: 164 AVLGDPAGQFNL-GISYLQAQPANA 187
+GD G F L G+ Y NA
Sbjct: 306 CDMGDEVGCFALAGMYYNMKDKENA 330
>sp|O25021|HCPE_HELPY Putative beta-lactamase HcpE OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=hcpE PE=3 SV=1
Length = 355
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 97 PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
+ A+ R G + G V K+L KALD++ +G G + MY+ M KE A
Sbjct: 271 DMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNMKDKENA 330
Query: 157 ISLYRQAAVLG 167
I +Y + LG
Sbjct: 331 IMIYDKGCKLG 341
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 106/259 (40%), Gaps = 23/259 (8%)
Query: 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
+A S K+ ND + E L G +++G+G R + KAL+ +
Sbjct: 45 KATSYFKKACNDGVS---EGCTQL--GIIYENGQGTRIDYKKALEYYKTACQADDREGCF 99
Query: 142 DAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQA 197
G +Y E + AI Y +A VL P +NLGI Y + NA++AV ++
Sbjct: 100 GLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKS 159
Query: 198 SIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAA---EGGYVRAMYNTSLCYSFGE 253
+ Y L + +G V + +A +YL+A +G RA+ SL +
Sbjct: 160 CNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRAL--GSLFENGDA 217
Query: 254 GLPLSHRQARKWMKRAADCG----HGKAQLE--HGLGLFTEGEMMKAVVYLELATRAGET 307
GL A ++++A CG G A L + LG + + + KA + + A G
Sbjct: 218 GLDEDFEVAFDYLQKA--CGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSA 275
Query: 308 AADHVKNVILQQLSATSRD 326
+ + Q A +D
Sbjct: 276 VSCSRMGFMYSQGDAVPKD 294
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + GR V+K+ KA + F + GS ++ G MY + D A+ Y +
Sbjct: 246 GSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERG 305
Query: 164 AVLGDPAGQFNL-GISYLQAQPANA 187
+GD G F L G+ Y NA
Sbjct: 306 CDMGDEVGCFALAGMYYNMKDKENA 330
>sp|Q9ZMM1|HCPA_HELPJ Beta-lactamase HcpA OS=Helicobacter pylori (strain J99) GN=hcpA
PE=3 SV=1
Length = 250
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQ 172
+G G K+L KALD + K + ++AG MY + AI Y +A L D G
Sbjct: 145 YGVGTPKDLRKALDLYEKACDLKDSPGCINAGYMYGVAKNFKEAIVRYSKACELKDGRGC 204
Query: 173 FNLGISYLQAQPANAEE 189
+NLG+ AQ +E
Sbjct: 205 YNLGVMQYNAQGTAKDE 221
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 20/184 (10%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDK 152
L+E + G ++ G+GV K+L KA+ + KG G +Y+ D
Sbjct: 58 LKEGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCRLLGNLYYNGQGVSKDA 117
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGI--SYLQAQPANAEEAVKLLYQAS----IAGHVRAQ 206
K+A+ Y ++ L G LG Y P + +A+ L +A G + A
Sbjct: 118 KKAS-QYYSKSCELNHAEGCTVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAG 176
Query: 207 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 266
Y GV N +EA Y +A E R YN + +G +QA +
Sbjct: 177 YMY--------GVAKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENF 228
Query: 267 KRAA 270
K+
Sbjct: 229 KKGC 232
>sp|O25001|HCPA_HELPY Beta-lactamase HcpA OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=hcpA PE=1 SV=1
Length = 250
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI 157
L A + G +G G K+L KALD + K + ++AG +Y + AI
Sbjct: 130 LNHAEGCMVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIYSVTKNFKEAI 189
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQAQPANAEE 189
Y +A L D G +NLG+ AQ +E
Sbjct: 190 VRYSKACELKDGRGCYNLGVMQYNAQGTAKDE 221
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 70/184 (38%), Gaps = 20/184 (10%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDK 152
L+ + G ++ G+GV K+L KA+ + KG G +Y+ D
Sbjct: 58 LKNGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDA 117
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGI--SYLQAQPANAEEAVKLLYQAS----IAGHVRAQ 206
K+A+ Y +A L G LG Y P + +A+ L +A G + A
Sbjct: 118 KKAS-QYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAG 176
Query: 207 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 266
Y + V N +EA Y +A E R YN + +G +QA +
Sbjct: 177 YIYS--------VTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENF 228
Query: 267 KRAA 270
K+
Sbjct: 229 KKGC 232
>sp|O24968|HCPD_HELPY Putative beta-lactamase HcpD OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=hcpD PE=1 SV=1
Length = 306
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKK---EAAISLYRQA 163
G +++ +GV+K+L KAL +F +G + V G MY MD K E A++LY++
Sbjct: 175 GYMYRNAKGVQKDLKKALANFKRGCHLKDGASCVSLGYMYEVGMDVKQNGEQALNLYKKG 234
Query: 164 AVLGDPAGQFNLGISYLQAQ--PANAEEAV 191
L +G N+ + Y + P + ++A+
Sbjct: 235 CYLKRGSGCHNVAVMYYTGKGVPKDLDKAI 264
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 20/189 (10%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI 157
LR + G ++ G GV+KNL KA+ + +G ++ G MY+
Sbjct: 93 LRNHLACASLGSMYEDGDGVQKNLPKAIYYYRRGCHLKGGVSCGSLGFMYFN---GTGVK 149
Query: 158 SLYRQAAVLGDPAGQFNLGIS--YLQAQPANAEEAVKLLYQASIAGHVRAQY-------- 207
Y +A L A N GIS ++ NA+ K L +A +A R +
Sbjct: 150 QNYAKALFLSKYACSLNYGISCNFVGYMYRNAKGVQKDLKKA-LANFKRGCHLKDGASCV 208
Query: 208 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR---AMYNTSLCYSFGEGLPLSHRQARK 264
L G V N ++A Y +G Y++ +N ++ Y G+G+P +A
Sbjct: 209 SLGYMYEVGMDVKQNGEQALNLY---KKGCYLKRGSGCHNVAVMYYTGKGVPKDLDKAIS 265
Query: 265 WMKRAADCG 273
+ K+ G
Sbjct: 266 YYKKGCTLG 274
>sp|Q9ZMS0|HCPD_HELPJ Putative beta-lactamase HcpD OS=Helicobacter pylori (strain J99)
GN=hcpD PE=3 SV=1
Length = 305
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-MDKK---EAAISLYRQA 163
G +K +GV K+L KAL +F +G + V G +Y MD K E A++LY++
Sbjct: 175 GYMYKSAKGVEKDLKKALANFKRGCHLKDGASCVSLGYLYEAGMDVKQNEEQALNLYKKG 234
Query: 164 AVLGDPAGQFNLGISYLQAQ--PANAEEAV 191
L + +G N+ + Y + P + E+A
Sbjct: 235 CSLKEGSGCHNVAVMYYTGKGAPKDLEKAT 264
>sp|Q9D4C6|LR2BP_MOUSE LRP2-binding protein OS=Mus musculus GN=Lrp2bp PE=2 SV=1
Length = 346
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 18/178 (10%)
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL 180
+D AL + RG +A G +Y+E E A++ + + D + LG+ Y
Sbjct: 42 VDTALQFLKERIRRGDAMAYFLRGQLYFEEGWYEEALAQFEEIQE-KDHQAIYQLGVMYY 100
Query: 181 Q--AQPANAEEAVKLLYQASIAG-----HVR--AQYQLALCLHRGRGVDFNLQEAARWYL 231
ANAE+ V + + + H++ A Y L G+GV + +EA R +L
Sbjct: 101 DGLGTIANAEKGVNYMRKILDSSCPQTMHLKFAAAYNLGRAYFEGKGVKRSDEEAERLWL 160
Query: 232 RAAEGGY----VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 285
AA+ G V+A L YS E P +A W A CG+G + + LGL
Sbjct: 161 LAADNGNPKASVKAQSILGLFYSMKE--PKELEKAFFWHSEA--CGNGSLESQGALGL 214
>sp|O25728|HCPC_HELPY Putative beta-lactamase HcpC OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=hcpC PE=1 SV=1
Length = 290
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPA--NAEEAVKLLYQASIAGHVR 204
Y E D +A + +A L + +G FNLG+ Y Q Q N ++A +A +
Sbjct: 40 YKEKDFTQAK-KYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSN 98
Query: 205 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 264
+ L + G+GV N +A ++Y +A + Y + Y G+ + ++A +
Sbjct: 99 GCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVE 158
Query: 265 WMKRAAD 271
+ +A D
Sbjct: 159 YFTKACD 165
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 207 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 266
+ L + ++G+GV+ NL++AA +Y +A + Y + Y G+G+ + +A ++
Sbjct: 65 FNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYY 124
Query: 267 KRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELAT 302
+A D + + G G++ +G+++ KAV Y A
Sbjct: 125 SKACDLKYAEGCASLG-GIYHDGKVVTRDFKKAVEYFTKAC 164
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 78/209 (37%), Gaps = 13/209 (6%)
Query: 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
K + + L+E G + G+GV KNL KA + K + G +Y+
Sbjct: 49 KKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYY 108
Query: 149 E----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPA--NAEEAVKLLYQASIAGH 202
A+ Y +A L G +LG Y + + ++AV+ +A
Sbjct: 109 SGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 168
Query: 203 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 262
L GRG +L++A Y +A + +N Y GEG + ++A
Sbjct: 169 GDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEA 228
Query: 263 RKWMKRAADCGHGKAQLEHGLGLFTEGEM 291
+A +LE+G G F G M
Sbjct: 229 LARYSKA-------CELENGGGCFNLGAM 250
>sp|A8XT88|FBSP1_CAEBR F-box/SPRY domain-containing protein 1 OS=Caenorhabditis briggsae
GN=fsn-1 PE=3 SV=1
Length = 332
Score = 38.1 bits (87), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 64 LPFDVLNKIAASFTLPQLRAASLVCKSWNDAL 95
LP VLN+I +L LR+A L C SWN+AL
Sbjct: 85 LPLKVLNQIFQYLSLKDLRSAMLTCHSWNNAL 116
>sp|Q52822|EXOR_RHILV Exopolysaccharide production negative regulator OS=Rhizobium
leguminosarum bv. viciae GN=exoR PE=4 SV=1
Length = 267
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 16/174 (9%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAE--EAVKLLYQASIAG 201
G ++ +KE A+ YR AA G ++ L Y + EA K+ + + G
Sbjct: 50 GFKAYKNGQKEEAVEAYRYAAEKGHTGSRWALANMYADGDGVTQDDFEAFKIYSEIAQQG 109
Query: 202 ----------HVRAQYQLALCLHRGRG---VDFNLQEAARWYLRAAEG-GYVRAMYNTSL 247
V A LA G V +L +A + Y + A G A + +
Sbjct: 110 VEPGSEDTGFFVNALLSLANYYKHGIAGSPVRIDLSQARQLYFQVASTFGVPEAQFQLAQ 169
Query: 248 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELA 301
GEG S +QA+KW+ +A GH A G LF EG+ + + + A
Sbjct: 170 MMLAGEGGNASPQQAKKWLNQARKSGHPGAMAVFGNILFDEGQTARGLALMTAA 223
>sp|Q9ZKB5|HCPC_HELPJ Putative beta-lactamase HcpC OS=Helicobacter pylori (strain J99)
GN=hcpC PE=3 SV=1
Length = 290
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPA--NAEEAVKLLYQASIAGHVR 204
Y E D +A + +A L + +G FNLG+ Y Q N ++A +A +
Sbjct: 40 YKEQDFTQAK-KYFEKACDLKENSGCFNLGVLYYQGHGVEKNLKKAASFYSKACDLNYSN 98
Query: 205 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 264
+ L + G+GV N +A ++Y +A + Y + Y G+ + ++A +
Sbjct: 99 GCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVE 158
Query: 265 WMKRAAD 271
+ +A D
Sbjct: 159 YFTKACD 165
Score = 35.0 bits (79), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 207 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 266
+ L + ++G GV+ NL++AA +Y +A + Y + Y G+G+ + +A ++
Sbjct: 65 FNLGVLYYQGHGVEKNLKKAASFYSKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYY 124
Query: 267 KRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELAT 302
+A D + + G G++ +G+++ KAV Y A
Sbjct: 125 SKACDLKYAEGCASLG-GIYHDGKVVTRDFKKAVEYFTKAC 164
Score = 32.0 bits (71), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 77/209 (36%), Gaps = 13/209 (6%)
Query: 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
K + + L+E G + G GV KNL KA + K + G +Y+
Sbjct: 49 KKYFEKACDLKENSGCFNLGVLYYQGHGVEKNLKKAASFYSKACDLNYSNGCHLLGNLYY 108
Query: 149 E----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPA--NAEEAVKLLYQASIAGH 202
A+ Y +A L G +LG Y + + ++AV+ +A
Sbjct: 109 SGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 168
Query: 203 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 262
L GRG +L++A Y +A + +N Y GEG + ++A
Sbjct: 169 GDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAAKNFKEA 228
Query: 263 RKWMKRAADCGHGKAQLEHGLGLFTEGEM 291
+A +LE+G G F G M
Sbjct: 229 LARYSKA-------CELENGGGCFNLGAM 250
>sp|Q18223|FBSP1_CAEEL F-box/SPRY domain-containing protein 1 OS=Caenorhabditis elegans
GN=fsn-1 PE=1 SV=1
Length = 332
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 64 LPFDVLNKIAASFTLPQLRAASLVCKSWNDAL 95
LP VLN+I L LR+A L C SWN+AL
Sbjct: 85 LPLKVLNQIFQYLPLKDLRSAMLTCHSWNNAL 116
>sp|O94614|CHR4_SCHPO Chitin synthase regulatory factor 4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=chr4 PE=1 SV=4
Length = 633
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 29/218 (13%)
Query: 120 NLDKALDSFLKGAARGSTL-----------AMVD----------AGLMYWE--MDKKEAA 156
NL++A++ F KG + + M+D +GL E D +A
Sbjct: 330 NLEEAVEYFEKGVSENDSACCWRLSLLILEGMLDGVGEYAHRHASGLELLERSADTADAD 389
Query: 157 IS--LYRQAAV-LGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCL 213
+ LY A V L + G +LG ++ P + A+K +A+ GH AQ ++
Sbjct: 390 VPSGLYSHALVNLHEHPGLVDLGSENIRV-PIDEATALKSFAKAAFLGHSSAQLRMGAVY 448
Query: 214 HRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAAD 271
G+ G + + +Y AA+ G A + Y G +G+P+ A +RA+
Sbjct: 449 EFGKYGCPVVPRYSLFYYSAAAKRGETEADLAVAKWYLNGSDGIPVDEDLAFMHAERASM 508
Query: 272 CGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAA 309
G+ AQ G T G +A + A +AG + A
Sbjct: 509 AGNANAQFLMGYLFDTRGNTEQATYWYNEAAKAGHSEA 546
>sp|Q88NC7|ALGK_PSEPK Alginate biosynthesis protein AlgK OS=Pseudomonas putida (strain
KT2440) GN=algK PE=3 SV=1
Length = 484
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 169 PAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 226
P + LG Y + + PA+A++A + L A+ AG + A Y L RG + Q+A
Sbjct: 315 PRAELLLGRLYYEGKTLPADAQKAEQHLQAAAEAGEISAHYYLGQLYRRGYLGNVEPQKA 374
Query: 227 ARWYLRAAEGGYVRAMYNTSLCYSFGEGL 255
L AA GG A Y + +S G G+
Sbjct: 375 VDHLLAAARGGQNSADYALAQLFSEGHGI 403
>sp|Q9ZPS0|FBX7_ARATH F-box only protein 7 OS=Arabidopsis thaliana GN=FBX7 PE=2 SV=3
Length = 395
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 54 KSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDAL-----RPLREAMVLLRWG 108
K +E HD++ L D+L KI S + A +VC W RPLR ++ R
Sbjct: 15 KMSENHDWSKLCPDILRKIIESLSSLDFYRAKIVCSDWYSVWKTCVKRPLRPWRIIYR-A 73
Query: 109 KRF---------KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
K + + KNL D + A+ G+ L M D+ L ++
Sbjct: 74 KYYISTSLMLFDPDEDKIYKNLVGVSDESYRLASSGNWLLMADSRLDFY 122
>sp|Q6IND7|LR2BP_XENLA LRP2-binding protein OS=Xenopus laevis GN=lrp2bp PE=2 SV=1
Length = 341
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 25/175 (14%)
Query: 170 AGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRA--QYQLALCLHRGRGVDFNLQE 225
A +NLG +Y + P + +EA + A+ G+ +A + Q L ++ + +LQ+
Sbjct: 131 AAAYNLGRAYFEGYGIPHSDKEAERWWLFAADNGNPKASLKAQSVLGMYYSSPPNVDLQK 190
Query: 226 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 285
A W+ A G + + + Y +G G+ + + A + +K AA+ G+ +
Sbjct: 191 AFLWHSEACGNGSLESQGALGVMYLYGNGIKKNVQAAIECLKEAAERGN----------V 240
Query: 286 FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 340
+ +G ++ +L T+A E A K ++ S D L+V++ +PS
Sbjct: 241 YAQGHLVSCYYQRKLYTKAVELA----KKIV-------SHDNIELLVNTTDCLPS 284
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 15/128 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G G++KN+ A++ + A RG+ A Y++ A+ L ++
Sbjct: 211 GVMYLYGNGIKKNVQAAIECLKEAAERGNVYAQGHLVSCYYQRKLYTKAVELAKKIV--- 267
Query: 168 DPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 227
L ++ P+ ++ G A + A CLH G G+ + A
Sbjct: 268 -SHDNIELLVNTTDCLPS-----------YTVKGVAIATFYFARCLHLGLGIKQDSTAAK 315
Query: 228 RWYLRAAE 235
+ Y +AA+
Sbjct: 316 QLYSKAAQ 323
>sp|A5PLI4|LR2BP_DANRE LRP2-binding protein OS=Danio rerio GN=lrp2bp PE=2 SV=1
Length = 343
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G GV+++ D AL + A RGS A Y+ LY +AA LG
Sbjct: 213 GLMYLYGHGVQRDSDSALFCLKEAAERGSVYAQGHLTACYYRR-------QLYSRAAALG 265
Query: 168 DPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 227
++ + Q Q EE V+ G + A CLH GRGV N +A
Sbjct: 266 QRVCEYKDTAAIAQ-QTDCLEEYVR-------KGIAIGMFYYARCLHLGRGVPQNRDKAK 317
Query: 228 RWYLRA 233
+ +A
Sbjct: 318 HYCTQA 323
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 17/132 (12%)
Query: 168 DPAGQFNLGISYLQAQPANAE--EAVKLL-----YQASIAGHVR--AQYQLALCLHRGRG 218
DP + L + Y + AV+ + + +S AG VR A Y L G G
Sbjct: 88 DPQALYQLAVIYYDGLGTKEDLGRAVEYMGRVAFWDSSEAGSVRYAALYNLGQAYLEGFG 147
Query: 219 VDFNLQEAARWYLRAAEGGY----VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 274
V + EA R +L AA+ G V+A + YS E L L R+A W +A CG+
Sbjct: 148 VQASSSEAERLWLLAADNGNPNASVKAQSALGMFYSRPESLDL--RKAFFWHSQA--CGN 203
Query: 275 GKAQLEHGLGLF 286
G + + LGL
Sbjct: 204 GSLESQAALGLM 215
>sp|Q9FYF9|FB76_ARATH F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1
SV=1
Length = 379
Score = 35.0 bits (79), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 186 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG---VDFNLQEAARWYLRAAEGGYVRAM 242
N L+ +A+I+ H A Y LA+ G G D +L+ RAA G+V A+
Sbjct: 137 NRGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDAL 196
Query: 243 YNTSLCYSFGEGLPLSHRQARKWMKRA 269
C G G+P + + R+++ +A
Sbjct: 197 RELGHCLQDGYGVPQNVSEGRRFLVQA 223
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 135 GSTLAMVDAGLM-YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAEE---- 189
GS A G++ ++ + + SL +AA+ ++L + + +
Sbjct: 119 GSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLR 178
Query: 190 -AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 233
V L +A+ GHV A +L CL G GV N+ E R+ ++A
Sbjct: 179 AGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFLVQA 223
>sp|Q8TB52|FBX30_HUMAN F-box only protein 30 OS=Homo sapiens GN=FBXO30 PE=1 SV=3
Length = 745
Score = 34.7 bits (78), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 61 FASLPFDVLNKIAA---SFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKR 110
+SLPF+VL IA F+L QL S + + +L R MV+L+WGKR
Sbjct: 613 LSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCGSLLQSR-GMVILQWGKR 664
>sp|Q5FWF7|FBX48_HUMAN F-box only protein 48 OS=Homo sapiens GN=FBXO48 PE=2 SV=1
Length = 155
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 56 TEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALR 96
++ + F LP ++ KI + + L ASL C+SWND +R
Sbjct: 30 SQNNFFELLPAEITFKIFSQLDIRSLCRASLTCRSWNDTIR 70
>sp|Q9FK27|FB342_ARATH F-box protein At5g50450 OS=Arabidopsis thaliana GN=At5g50450 PE=2
SV=1
Length = 336
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 167 GDPAGQFNLG-ISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG---VDFN 222
G+ ++LG I + Q N L+ +A+I H A Y L++ G G D N
Sbjct: 97 GNIDASYSLGMIRFYCLQ--NPVSGASLMAKAAIKSHAPALYSLSVIQFNGSGGSKTDKN 154
Query: 223 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 269
L+ R+A G+V A+ C G G+P + R+ + +A
Sbjct: 155 LRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201
>sp|Q96BR5|SELR1_HUMAN Sel1 repeat-containing protein 1 OS=Homo sapiens GN=SELRC1 PE=1
SV=2
Length = 231
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 222 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGH 274
+L +A +Y RA +GGY + +N S + G G P A K+ +A D GH
Sbjct: 130 DLGKARDYYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGH 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.132 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,465,313
Number of Sequences: 539616
Number of extensions: 4590719
Number of successful extensions: 10762
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 10458
Number of HSP's gapped (non-prelim): 194
length of query: 342
length of database: 191,569,459
effective HSP length: 118
effective length of query: 224
effective length of database: 127,894,771
effective search space: 28648428704
effective search space used: 28648428704
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)