Query 019341
Match_columns 342
No_of_seqs 105 out of 113
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 14:36:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019341.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019341hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ch0_A Inner nuclear membrane 99.3 1.5E-13 5E-18 117.5 0.5 79 254-333 6-85 (133)
2 1b9w_A Protein (merozoite surf 92.6 0.044 1.5E-06 43.9 1.8 33 95-127 11-48 (95)
3 1ob1_C Major merozoite surface 91.5 0.08 2.7E-06 42.9 2.1 32 94-125 10-46 (99)
4 1n1i_A Merozoite surface prote 89.3 0.15 5.1E-06 41.7 1.9 30 95-124 17-51 (105)
5 2ktc_A Potassium channel toxin 66.2 0.61 2.1E-05 30.3 -1.4 22 92-113 4-32 (34)
6 1acw_A Natural scorpion peptid 54.7 1.2 4.2E-05 27.9 -1.5 20 92-111 2-28 (29)
7 1gl4_A Nidogen-1, entactin; im 53.4 5.1 0.00018 37.9 1.8 35 91-125 6-48 (285)
8 2kl7_A Fibulin-4; secreted, ca 49.7 6.5 0.00022 29.1 1.5 14 108-121 56-70 (71)
9 1g1s_A P-selectin; selectin, l 48.1 4.7 0.00016 33.3 0.6 29 95-125 126-158 (162)
10 1emn_A Fibrillin; extracellula 47.0 9.6 0.00033 28.4 2.1 26 95-121 13-42 (82)
11 2k2s_B Micronemal protein 6; m 45.3 3.6 0.00012 29.9 -0.5 27 95-122 18-50 (61)
12 1g1t_A E-selectin; EGF, adhesi 44.9 4.8 0.00016 33.0 0.1 28 94-123 125-156 (157)
13 1a3p_A Epidermal growth factor 44.6 11 0.00036 25.1 1.8 27 95-123 10-42 (45)
14 2bou_A EGF-like module contain 43.7 13 0.00045 30.1 2.7 27 95-121 8-42 (143)
15 3cfw_A L-selectin; EGF, cell a 41.9 9.5 0.00032 31.5 1.5 30 94-125 125-158 (164)
16 1edm_B Factor IX; epidermal gr 41.7 13 0.00046 23.5 1.9 26 94-121 9-38 (39)
17 2a55_A C4B-binding protein; co 38.4 19 0.00065 29.1 2.8 49 72-124 44-111 (133)
18 1gkn_A Complement receptor typ 38.0 17 0.00057 29.1 2.4 51 72-125 44-113 (128)
19 1ccv_A AMCI, chymotrypsin inhi 37.1 11 0.00037 26.5 0.9 23 101-124 31-54 (56)
20 1srz_A Gamma-aminobutyric acid 32.6 13 0.00043 26.6 0.7 19 107-126 37-58 (68)
21 4aqb_A Mannan-binding lectin s 32.3 19 0.00066 33.7 2.2 32 95-126 286-336 (361)
22 1jlz_A Tityustoxin alpha-KTX; 31.7 13 0.00043 23.0 0.5 20 92-111 4-24 (26)
23 2ehf_A CUB and sushi domain-co 30.7 15 0.0005 26.6 0.8 20 107-126 38-60 (73)
24 1apq_A Complement protease C1R 30.4 25 0.00087 23.5 2.0 24 100-123 24-53 (53)
25 1hae_A Heregulin-alpha; growth 30.2 20 0.00069 25.4 1.5 27 95-123 13-48 (63)
26 2yra_A Seizure 6-like protein 30.0 14 0.00048 26.7 0.6 20 107-126 34-56 (74)
27 1egf_A Epidermal growth factor 29.3 43 0.0015 22.8 3.1 27 95-123 13-45 (53)
28 2gy5_A Angiopoietin-1 receptor 28.1 28 0.00097 34.1 2.6 29 92-122 201-231 (423)
29 2zjs_E Preprotein translocase 27.2 63 0.0021 23.0 3.7 30 36-65 18-47 (60)
30 2ygo_A WIF-1, WNT inhibitory f 26.0 45 0.0015 29.6 3.2 31 91-123 149-181 (188)
31 1pvz_A K+ toxin-like peptide; 26.0 21 0.00072 22.7 0.8 19 91-109 11-30 (31)
32 2jkh_L Factor X light chain; p 25.2 33 0.0011 23.7 1.8 24 101-124 14-43 (55)
33 2ddu_A Reelin; beta-jelly-roll 24.5 22 0.00075 35.0 1.0 31 95-125 197-227 (387)
34 1hvw_A Omega-ACTX-HV1A, omega- 23.8 36 0.0012 20.8 1.5 17 94-110 6-25 (26)
35 1tpg_A T-plasminogen activator 23.1 50 0.0017 24.9 2.7 28 95-124 55-88 (91)
36 1wz5_A Potassium channel block 22.7 33 0.0011 22.4 1.3 21 91-111 8-34 (35)
37 2ygq_A WIF-1, WNT inhibitory f 22.5 44 0.0015 31.4 2.7 26 95-122 154-180 (324)
38 2vj3_A Neurogenic locus notch 22.0 36 0.0012 27.3 1.7 27 95-123 14-44 (135)
39 2bou_A EGF-like module contain 21.7 45 0.0015 26.8 2.3 30 95-124 105-140 (143)
40 2aty_A Complement receptor chi 21.5 48 0.0016 30.8 2.7 56 71-126 40-119 (376)
41 1lmj_A Fibrillin 1; EGF, calci 21.2 43 0.0015 24.8 1.9 25 96-121 56-86 (86)
42 1x7a_L Coagulation factor IX, 21.1 37 0.0013 28.1 1.7 27 95-123 55-85 (146)
43 1uzk_A Fibrillin-1; glycoprote 21.1 37 0.0013 28.0 1.7 26 95-121 11-42 (162)
44 3fcs_B Integrin beta-3; beta p 21.0 43 0.0015 35.2 2.4 19 96-114 536-554 (690)
No 1
>2ch0_A Inner nuclear membrane protein MAN1; winged helix motif, DNA, nuclear protein; NMR {Homo sapiens}
Probab=99.33 E-value=1.5e-13 Score=117.53 Aligned_cols=79 Identities=13% Similarity=0.287 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCCCCCCCeeecccccccccCCCCC-CChhhhHHHHhhccCCCCCcccc
Q 019341 254 KVHRRRYFAIRVEELYHQVCEILEENALMSKSVNGECEPWVVASRLRDHLLLPKER-KDPVIWKKVFFLCPFTRPSFNLG 332 (342)
Q Consensus 254 ~~~~rr~~~~Rv~eLV~~vld~L~~~al~~~~~~~~~eP~I~~~qLRD~lL~~~~r-kr~~LWkkV~kvVE~~~~~~~~~ 332 (342)
++++++.+.++|.+||++|+|+|++|+..+. .++..+|||+++||||+||.++.| ++++||+||+++||+|+.-.-.|
T Consensus 6 r~~k~~ee~~~v~~LV~~Iid~L~~q~~~~~-e~~~~~p~l~i~hLRD~ll~~~~r~k~~~lW~kAvk~lE~NesRVRte 84 (133)
T 2ch0_A 6 RWTKEEEETRQMYDMVVKIIDVLRSHNEACQ-ENKDLQPYMPIPHVRDSLIQPHDRKKMKKVWDRAVDFLAANESRVRTE 84 (133)
T ss_dssp CCSTHHHHHTTTTTTHHHHHHHHHHHHHHHT-TSSCSCSCBCHHHHHHTTCCSTTGGGGHHHHHHHHHHHTTTCCCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCCCCceehhhhHhhhcCccchHHHHHHHHHHHHHHHcccchhhhc
Confidence 3455677888999999999999988875432 234568999999999999999544 56999999999999999855444
Q ss_pred e
Q 019341 333 F 333 (342)
Q Consensus 333 ~ 333 (342)
.
T Consensus 85 ~ 85 (133)
T 2ch0_A 85 T 85 (133)
T ss_dssp E
T ss_pred c
Confidence 3
No 2
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=92.58 E-value=0.044 Score=43.90 Aligned_cols=33 Identities=21% Similarity=0.600 Sum_probs=28.7
Q ss_pred cCCCCceecC---C-ce-ecCCCceecCCccccCchhh
Q 019341 95 PCPSNGECHQ---G-KL-ECFHGYRKHGKLCVEDGDIN 127 (342)
Q Consensus 95 PCP~ha~C~~---g-~l-~C~~gfvl~~p~CvpD~ek~ 127 (342)
.||+||.||. | .. +|-.||++.+.+||+|++..
T Consensus 11 kcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~ 48 (95)
T 1b9w_A 11 NVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMT 48 (95)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCC
T ss_pred CCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCC
Confidence 7999999997 4 34 99999999999999998653
No 3
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=91.49 E-value=0.08 Score=42.88 Aligned_cols=32 Identities=31% Similarity=0.912 Sum_probs=27.8
Q ss_pred ccCCCCceecC---Cc-e-ecCCCceecCCccccCch
Q 019341 94 EPCPSNGECHQ---GK-L-ECFHGYRKHGKLCVEDGD 125 (342)
Q Consensus 94 ~PCP~ha~C~~---g~-l-~C~~gfvl~~p~CvpD~e 125 (342)
.-||+||.|+. |. . +|..||...+.+|+++..
T Consensus 10 ~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~ 46 (99)
T 1ob1_C 10 KQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPN 46 (99)
T ss_dssp CCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSC
T ss_pred CCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCC
Confidence 36999999998 53 4 999999999999999964
No 4
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=89.30 E-value=0.15 Score=41.69 Aligned_cols=30 Identities=30% Similarity=0.783 Sum_probs=26.5
Q ss_pred cCCCCceecC---C-ce-ecCCCceecCCccccCc
Q 019341 95 PCPSNGECHQ---G-KL-ECFHGYRKHGKLCVEDG 124 (342)
Q Consensus 95 PCP~ha~C~~---g-~l-~C~~gfvl~~p~CvpD~ 124 (342)
-||+||.|+. | .. +|-.||...+.+|+++.
T Consensus 17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~N 51 (105)
T 1n1i_A 17 NVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPAS 51 (105)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEECSSSEEECC
T ss_pred CCCCCCCeEECCCCCEeEEEECCeeccCCEEEECC
Confidence 6999999998 4 34 99999999999999993
No 5
>2ktc_A Potassium channel toxin alpha-KTX 9.4; BTK-2, scorpion toxin, KV1.1, disulfide bond, ionic channel inhibitor, neurotoxin; NMR {Mesobuthus tamulus}
Probab=66.16 E-value=0.61 Score=30.26 Aligned_cols=22 Identities=27% Similarity=0.744 Sum_probs=16.9
Q ss_pred CCccCCCC-------ceecCCceecCCCc
Q 019341 92 SCEPCPSN-------GECHQGKLECFHGY 113 (342)
Q Consensus 92 ~C~PCP~h-------a~C~~g~l~C~~gf 113 (342)
.|+-||.| +.|.+|...|+.|-
T Consensus 4 gCEeCP~HCk~k~A~~tCdn~~C~Cn~~~ 32 (34)
T 2ktc_A 4 GCAECPMHCKGKMAKPTCENEVCKCNIGK 32 (34)
T ss_dssp HHHHHHHTCCTTCCCEEEETTEEEECTTC
T ss_pred ccccChhhhccccccccccCCeEecccCC
Confidence 48888887 57888888888773
No 6
>1acw_A Natural scorpion peptide P01; scorpion toxin, potassium channel, neurotoxin, toxin; NMR {Androctonus mauretanicus mauretanicus} SCOP: g.3.7.2 PDB: 1wm7_A
Probab=54.69 E-value=1.2 Score=27.92 Aligned_cols=20 Identities=40% Similarity=0.963 Sum_probs=14.3
Q ss_pred CCccCCCC-------ceecCCceecCC
Q 019341 92 SCEPCPSN-------GECHQGKLECFH 111 (342)
Q Consensus 92 ~C~PCP~h-------a~C~~g~l~C~~ 111 (342)
.|+-||.| +.|.++.-.|++
T Consensus 2 ~CedcP~HC~~k~a~~~C~n~~C~C~~ 28 (29)
T 1acw_A 2 SCEDCPEHCSTQKAQAKCDNDKCVCEP 28 (29)
T ss_dssp CSSHHHHHHHTTTCEEEEETTEEEEEC
T ss_pred ccccchhhhhcccccccccCCeeecCC
Confidence 58889977 567777666654
No 7
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=53.42 E-value=5.1 Score=37.88 Aligned_cols=35 Identities=29% Similarity=0.865 Sum_probs=27.9
Q ss_pred CCCc----cCCCCceecC--Cc--eecCCCceecCCccccCch
Q 019341 91 DSCE----PCPSNGECHQ--GK--LECFHGYRKHGKLCVEDGD 125 (342)
Q Consensus 91 ~~C~----PCP~ha~C~~--g~--l~C~~gfvl~~p~CvpD~e 125 (342)
+.|. +|-.||.|.+ |. ..|.+||.-.+..|...++
T Consensus 6 DEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d~d~ 48 (285)
T 1gl4_A 6 QTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVAEGS 48 (285)
T ss_dssp -CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEEETTC
T ss_pred hhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCCCCC
Confidence 5564 8999999997 43 4999999999999987554
No 8
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=49.72 E-value=6.5 Score=29.11 Aligned_cols=14 Identities=36% Similarity=0.835 Sum_probs=10.6
Q ss_pred ecCCCceecCC-ccc
Q 019341 108 ECFHGYRKHGK-LCV 121 (342)
Q Consensus 108 ~C~~gfvl~~p-~Cv 121 (342)
.|.+||.+.+. +|+
T Consensus 56 ~C~~Gy~~~~~~~C~ 70 (71)
T 2kl7_A 56 PCPPGYEPDDQDSCV 70 (71)
T ss_dssp CSCTTEEEECCCCSC
T ss_pred CCCCCeeeCCCCccc
Confidence 48889988764 776
No 9
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=48.09 E-value=4.7 Score=33.32 Aligned_cols=29 Identities=31% Similarity=0.814 Sum_probs=23.0
Q ss_pred cCCCCceecCC--ce--ecCCCceecCCccccCch
Q 019341 95 PCPSNGECHQG--KL--ECFHGYRKHGKLCVEDGD 125 (342)
Q Consensus 95 PCP~ha~C~~g--~l--~C~~gfvl~~p~CvpD~e 125 (342)
||..+|.|.++ .. .|.+||. |..|+.+.+
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~--G~~Ce~~~~ 158 (162)
T 1g1s_A 126 SCSKQGECLETIGNYTCSCYPGFY--GPECEYVRD 158 (162)
T ss_dssp GGGGSEEEEECSSSEEEEECTTEE--STTSCEECC
T ss_pred CCCCCCEEecCCCCceEeCCCCCc--CcccccCcc
Confidence 78889999985 33 8999999 567887753
No 10
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=46.96 E-value=9.6 Score=28.39 Aligned_cols=26 Identities=38% Similarity=0.844 Sum_probs=20.9
Q ss_pred cCCCCceecCC--c--eecCCCceecCCccc
Q 019341 95 PCPSNGECHQG--K--LECFHGYRKHGKLCV 121 (342)
Q Consensus 95 PCP~ha~C~~g--~--l~C~~gfvl~~p~Cv 121 (342)
||. ||.|.+. . -.|.+||.+.+..|+
T Consensus 13 ~C~-~g~C~n~~g~y~C~C~~Gy~~~g~~C~ 42 (82)
T 1emn_A 13 VCK-HGQCINTDGSYRCECPFGYILAGNECV 42 (82)
T ss_dssp SCS-SSEECCCSSCCCEECCTTEEEETTEEE
T ss_pred CcC-CCEEEecCCCEEEECCCCeECCCCccC
Confidence 674 7999983 3 399999998888885
No 11
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=45.28 E-value=3.6 Score=29.94 Aligned_cols=27 Identities=30% Similarity=0.666 Sum_probs=19.0
Q ss_pred cCCCC--ceecCC--c--eecCCCceecCCcccc
Q 019341 95 PCPSN--GECHQG--K--LECFHGYRKHGKLCVE 122 (342)
Q Consensus 95 PCP~h--a~C~~g--~--l~C~~gfvl~~p~Cvp 122 (342)
||..+ |.|.+. . -.|.+||.. +..|+.
T Consensus 18 PC~nga~gtC~~~~g~y~C~C~~Gy~~-G~~C~~ 50 (61)
T 2k2s_B 18 PCGPEAAGTCKETNSGYICRCNQGYRI-SLDGTG 50 (61)
T ss_dssp SSCSSSCCEEEECSSEEEEECCTTEEE-EECSSS
T ss_pred CCcCCCccccccCCCceEeECCCCCcc-CCCCCC
Confidence 78777 799874 3 399999963 445643
No 12
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=44.91 E-value=4.8 Score=32.95 Aligned_cols=28 Identities=29% Similarity=0.755 Sum_probs=22.0
Q ss_pred ccCCCCceecCC--ce--ecCCCceecCCccccC
Q 019341 94 EPCPSNGECHQG--KL--ECFHGYRKHGKLCVED 123 (342)
Q Consensus 94 ~PCP~ha~C~~g--~l--~C~~gfvl~~p~CvpD 123 (342)
.||+.+|.|.++ .. .|.+||. ++.|+-|
T Consensus 125 ~pc~~~g~C~~~~~~~~c~C~~g~~--g~~Ce~~ 156 (157)
T 1g1t_A 125 TSCSGHGECVETINNYTCKCDPGFS--GLKCEQI 156 (157)
T ss_dssp TGGGGSEEEEEETTEEEEEECTTEE--STTSCEE
T ss_pred CCCCCCCEeecCCCCeeEECCCCcc--Ccccccc
Confidence 479999999986 33 8999998 6777643
No 13
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=44.65 E-value=11 Score=25.09 Aligned_cols=27 Identities=26% Similarity=0.620 Sum_probs=20.3
Q ss_pred cCCCCceec--C--Cc-e-ecCCCceecCCccccC
Q 019341 95 PCPSNGECH--Q--GK-L-ECFHGYRKHGKLCVED 123 (342)
Q Consensus 95 PCP~ha~C~--~--g~-l-~C~~gfvl~~p~CvpD 123 (342)
||--+|.|. + +. . .|.+||. +..|+.|
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~--G~~Ce~~ 42 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYS--GDRCQTR 42 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEE--TTTTCEE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCc--CCcCCcc
Confidence 788889997 3 23 3 9999995 7788754
No 14
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=43.73 E-value=13 Score=30.15 Aligned_cols=27 Identities=22% Similarity=0.625 Sum_probs=22.4
Q ss_pred cCCCCceecCCc-eecCCCceec-------CCccc
Q 019341 95 PCPSNGECHQGK-LECFHGYRKH-------GKLCV 121 (342)
Q Consensus 95 PCP~ha~C~~g~-l~C~~gfvl~-------~p~Cv 121 (342)
||+.||.|.+.. -.|.+||... +..|+
T Consensus 8 ~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~ 42 (143)
T 2bou_A 8 WCPQDSSCVNATACRCNPGFSSFSEIITTPMETCD 42 (143)
T ss_dssp TCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCE
T ss_pred cCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCC
Confidence 799999999974 4999999964 36785
No 15
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=41.94 E-value=9.5 Score=31.49 Aligned_cols=30 Identities=30% Similarity=0.526 Sum_probs=22.4
Q ss_pred ccCCCCceecCC----ceecCCCceecCCccccCch
Q 019341 94 EPCPSNGECHQG----KLECFHGYRKHGKLCVEDGD 125 (342)
Q Consensus 94 ~PCP~ha~C~~g----~l~C~~gfvl~~p~CvpD~e 125 (342)
.+|+.||.|.++ .-.|.+||. +..|+.+.+
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~--g~~C~~~~~ 158 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYY--GPQCQFVQV 158 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCB--SSSSCBC--
T ss_pred CcCCCCCeecccCCCceeeeCCCcc--ccccccccc
Confidence 589999999963 349999998 567877654
No 16
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=41.70 E-value=13 Score=23.52 Aligned_cols=26 Identities=35% Similarity=0.911 Sum_probs=19.4
Q ss_pred ccCCCCceecC--Cce--ecCCCceecCCccc
Q 019341 94 EPCPSNGECHQ--GKL--ECFHGYRKHGKLCV 121 (342)
Q Consensus 94 ~PCP~ha~C~~--g~l--~C~~gfvl~~p~Cv 121 (342)
.||..+|.|.+ +.. .|.+||. +..|+
T Consensus 9 ~pC~ngg~C~~~~~~~~C~C~~G~~--G~~Ce 38 (39)
T 1edm_B 9 NPCLNGGSCKDDINSYECWCPFGFE--GKNCE 38 (39)
T ss_dssp CCCCTTCEEEEETTEEEEECCTTCC--STTSC
T ss_pred CCCCCCCEeEcCCCceEeECCCCCc--CCccC
Confidence 38999999987 333 8899995 55664
No 17
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=38.44 E-value=19 Score=29.14 Aligned_cols=49 Identities=24% Similarity=0.447 Sum_probs=31.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCc--cCCC-----Cce--ecC----C-c--eecCCCceecC---CccccCc
Q 019341 72 TSKPFCDSNLLLDSPQSPTDSCE--PCPS-----NGE--CHQ----G-K--LECFHGYRKHG---KLCVEDG 124 (342)
Q Consensus 72 ~~~pfCds~~~~~~~~~~~~~C~--PCP~-----ha~--C~~----g-~--l~C~~gfvl~~---p~CvpD~ 124 (342)
+..-.|..+. ..+ . .|.|+ .||. ||. |.. | . +.|++||.+.+ .+|..|+
T Consensus 44 ~~~~~C~~~G-~Ws--~-~p~C~~~~C~~p~~~~nG~~~~~~~~~~g~~v~~~C~~Gy~L~G~~~~~C~~~G 111 (133)
T 2a55_A 44 TQTLTCNSDG-EWV--Y-NTFCIYKRCRHPGELRNGQVEIKTDLSFGSQIEFSCSEGFFLIGSTTSRCEVQD 111 (133)
T ss_dssp CCCCEECSSS-SEE--C-CCCSEECBCCCCCCCTTBCCCCCSTTBSSCBCCCCBCTTCBCCSCSCCBCCCCS
T ss_pred CCEEEECCCC-eEC--C-CCcCccCCCcCCCccCCceEEcCCCCcCCCEEEEEcCCCCEEcCCCeeEecCCC
Confidence 4555676642 112 2 78897 5754 554 311 2 2 38999999988 7888887
No 18
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=38.05 E-value=17 Score=29.07 Aligned_cols=51 Identities=33% Similarity=0.610 Sum_probs=31.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCc--cCC-----CCce--ecC----C-c--eecCCCceecC---CccccCch
Q 019341 72 TSKPFCDSNLLLDSPQSPTDSCE--PCP-----SNGE--CHQ----G-K--LECFHGYRKHG---KLCVEDGD 125 (342)
Q Consensus 72 ~~~pfCds~~~~~~~~~~~~~C~--PCP-----~ha~--C~~----g-~--l~C~~gfvl~~---p~CvpD~e 125 (342)
+..-.|..+. .-....|.|+ .|| +||. |.. | . +.|++||.+.+ -+|..|+.
T Consensus 44 ~~~~~C~~~g---~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~ 113 (128)
T 1gkn_A 44 PFSITCLDNL---VWSSPKDVCKRKSCKTPPDPVNGMVHVITDIQVGSRITYSCTTGHRLIGHSSAECILSGN 113 (128)
T ss_dssp CEEEEBCSSS---CBCCCCSCCEECBCCCCCCCTTEEEEESSCCBTTCEEEEEECTTEECCSCSEEEEEECSS
T ss_pred CCceEECCCC---cCCCCCCeEcceECcCCCCCCCcEEEeccCCccCCEEEEEeCCCCEEccCCceEEcCCCC
Confidence 3444576542 1123468887 475 4665 321 3 2 48999999988 67887775
No 19
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=37.08 E-value=11 Score=26.49 Aligned_cols=23 Identities=30% Similarity=0.816 Sum_probs=18.7
Q ss_pred eecCCceecCCCceecC-CccccCc
Q 019341 101 ECHQGKLECFHGYRKHG-KLCVEDG 124 (342)
Q Consensus 101 ~C~~g~l~C~~gfvl~~-p~CvpD~ 124 (342)
.|.+| -.|.+||++.. ..||+-.
T Consensus 31 ~C~~G-C~C~~G~v~~~~g~CV~~~ 54 (56)
T 1ccv_A 31 QCRIG-CQCQEGFLRNGEGACVLPE 54 (56)
T ss_dssp SCEEE-EEECTTCEEETTTEEECGG
T ss_pred cCCCC-CcCCCCeeECCCCcccChh
Confidence 57666 78999999988 7999754
No 20
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A
Probab=32.60 E-value=13 Score=26.62 Aligned_cols=19 Identities=21% Similarity=0.625 Sum_probs=15.0
Q ss_pred eecCCCceecC---CccccCchh
Q 019341 107 LECFHGYRKHG---KLCVEDGDI 126 (342)
Q Consensus 107 l~C~~gfvl~~---p~CvpD~ek 126 (342)
+.|++||.|.| -+|. |+..
T Consensus 37 f~C~~Gy~L~G~~~~~C~-~g~W 58 (68)
T 1srz_A 37 FRCDPDFHLVGSSRSVCS-QGQW 58 (68)
T ss_dssp EEECTTEEECSCCEEEEE-TTEE
T ss_pred EECCCCCEEeCCCcCEEC-CCEE
Confidence 49999999999 5677 6643
No 21
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=32.29 E-value=19 Score=33.66 Aligned_cols=32 Identities=25% Similarity=0.585 Sum_probs=23.6
Q ss_pred cCCCCceecCC--------c--eecCCCceecCC---------ccccCchh
Q 019341 95 PCPSNGECHQG--------K--LECFHGYRKHGK---------LCVEDGDI 126 (342)
Q Consensus 95 PCP~ha~C~~g--------~--l~C~~gfvl~~p---------~CvpD~ek 126 (342)
++|.||.|... . +.|++||.+.++ +|..|+..
T Consensus 286 ~~p~~G~~~~~~~~~~~g~~v~~~C~~GY~l~g~~~~~~~~~~~C~~~g~W 336 (361)
T 4aqb_A 286 QPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTW 336 (361)
T ss_dssp CCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCB
T ss_pred CCCCCCEEecCCCCcccCCEEEEEeCCCeEEeCCCcccccCeeEECCCCee
Confidence 57889998631 2 489999998773 58887754
No 22
>1jlz_A Tityustoxin alpha-KTX; scorpion venom, K+-channel blocker, structure; NMR {Synthetic} SCOP: g.3.7.2
Probab=31.74 E-value=13 Score=22.96 Aligned_cols=20 Identities=35% Similarity=1.137 Sum_probs=15.8
Q ss_pred CCc-cCCCCceecCCceecCC
Q 019341 92 SCE-PCPSNGECHQGKLECFH 111 (342)
Q Consensus 92 ~C~-PCP~ha~C~~g~l~C~~ 111 (342)
+|. ||-.+|.|.+|+-.|-+
T Consensus 4 ~C~~~C~~~gKCmNgkC~Cy~ 24 (26)
T 1jlz_A 4 SCRKKCKGSGKCINGRCKCYX 24 (26)
T ss_dssp SHHHHTTSSEEEETTEEEEC-
T ss_pred hhhhhhCCCCEEeCCCceeec
Confidence 454 88899999999988864
No 23
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.72 E-value=15 Score=26.59 Aligned_cols=20 Identities=20% Similarity=0.517 Sum_probs=15.8
Q ss_pred eecCCCceecC---CccccCchh
Q 019341 107 LECFHGYRKHG---KLCVEDGDI 126 (342)
Q Consensus 107 l~C~~gfvl~~---p~CvpD~ek 126 (342)
+.|++||.|.+ .+|..|+..
T Consensus 38 f~C~~Gy~L~G~~~~~C~~~g~W 60 (73)
T 2ehf_A 38 FECPAAFELVGERVITCQQNNQW 60 (73)
T ss_dssp EECCSSCCBCSCSEEEBCSSSSB
T ss_pred EEcCCCCEEeCCCeEEECCCCeE
Confidence 49999999998 567777643
No 24
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=30.37 E-value=25 Score=23.46 Aligned_cols=24 Identities=29% Similarity=0.711 Sum_probs=17.5
Q ss_pred ceecC--Cce--ecCCCceecC--CccccC
Q 019341 100 GECHQ--GKL--ECFHGYRKHG--KLCVED 123 (342)
Q Consensus 100 a~C~~--g~l--~C~~gfvl~~--p~CvpD 123 (342)
+.|.+ |.. .|.+||.+.. .+|+++
T Consensus 24 ~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~~ 53 (53)
T 1apq_A 24 HLCHNYVGGYFCSCRPGYELQEDRHSCQAE 53 (53)
T ss_dssp SEEEEETTEEEEECSTTCEECTTSSCEECC
T ss_pred CEeECCCCCeEEECCCCCeECCCCCccCCC
Confidence 59987 543 8999999764 677653
No 25
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=30.17 E-value=20 Score=25.37 Aligned_cols=27 Identities=37% Similarity=0.946 Sum_probs=20.0
Q ss_pred cCCCCceecC-------Cc-e-ecCCCceecCCccccC
Q 019341 95 PCPSNGECHQ-------GK-L-ECFHGYRKHGKLCVED 123 (342)
Q Consensus 95 PCP~ha~C~~-------g~-l-~C~~gfvl~~p~CvpD 123 (342)
||--+|.|.+ +. . .|.+||. +..|+.|
T Consensus 13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~--G~~Ce~~ 48 (63)
T 1hae_A 13 FCVNGGECFMVKDLSNPSRYLCKCQPGFT--GARCTEN 48 (63)
T ss_dssp TSCTTCEEEEEESSSSSCCEEEECCTTEE--STTSCEE
T ss_pred cCCCCcEEecCCccCCCCCEEEECCCCCc--CCccCcC
Confidence 6777799974 32 3 9999995 7788654
No 26
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.96 E-value=14 Score=26.69 Aligned_cols=20 Identities=30% Similarity=0.426 Sum_probs=16.1
Q ss_pred eecCCCceecC---CccccCchh
Q 019341 107 LECFHGYRKHG---KLCVEDGDI 126 (342)
Q Consensus 107 l~C~~gfvl~~---p~CvpD~ek 126 (342)
+.|++||.+.+ -+|..|+..
T Consensus 34 y~C~~Gy~L~G~~~~~C~~~g~W 56 (74)
T 2yra_A 34 YQCDPGYDIVGSDTLTCQWDLSW 56 (74)
T ss_dssp EEECTTEEEESCSEEEBCTTSCB
T ss_pred EECCCCCEECCCCceEECCCCEE
Confidence 49999999998 568777654
No 27
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=29.31 E-value=43 Score=22.83 Aligned_cols=27 Identities=30% Similarity=0.764 Sum_probs=19.9
Q ss_pred cCCCCceec--C--Cc-e-ecCCCceecCCccccC
Q 019341 95 PCPSNGECH--Q--GK-L-ECFHGYRKHGKLCVED 123 (342)
Q Consensus 95 PCP~ha~C~--~--g~-l-~C~~gfvl~~p~CvpD 123 (342)
||--.|.|. + +. . .|.+||. +..|+.+
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~--G~~Ce~~ 45 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYS--GDRCQTR 45 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCC--SSSSCCC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCc--CCcCCcc
Confidence 687789998 4 23 3 8999994 7788654
No 28
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=28.06 E-value=28 Score=34.11 Aligned_cols=29 Identities=38% Similarity=0.991 Sum_probs=23.0
Q ss_pred CCccCCCCceecC--CceecCCCceecCCcccc
Q 019341 92 SCEPCPSNGECHQ--GKLECFHGYRKHGKLCVE 122 (342)
Q Consensus 92 ~C~PCP~ha~C~~--g~l~C~~gfvl~~p~Cvp 122 (342)
.|.||-.||.|.+ |.-.|.+||. +..|+.
T Consensus 201 ~C~~C~~~G~C~~~~g~C~C~~G~~--G~~Ce~ 231 (423)
T 2gy5_A 201 LCTACMNNGVCHEDTGECICPPGFM--GRTCEK 231 (423)
T ss_dssp ECCCCCTTCEECTTTCCEECCTTEE--STTSCE
T ss_pred CCCCCCCCCEEECCCCcEeCCCCcc--CCCccc
Confidence 4668999999998 4569999996 666764
No 29
>2zjs_E Preprotein translocase SECE subunit; translocon, SEC, protein-conducting-channel, membrane, prote transport, translocation, transmembrane, transport; 3.20A {Thermus thermophilus} PDB: 2zqp_E
Probab=27.17 E-value=63 Score=23.00 Aligned_cols=30 Identities=7% Similarity=0.164 Sum_probs=20.5
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 019341 36 QSLFPSKQDLLRLITVVAIASSVALTCNYL 65 (342)
Q Consensus 36 ~~~~~~~~~~~~l~~vl~ia~~~a~~c~~l 65 (342)
.=-.|+|+|..+.-.+.++.+++..+..++
T Consensus 18 KV~WPtr~e~~~~t~vViv~v~i~~~~~~~ 47 (60)
T 2zjs_E 18 RVTWPTREQVVEGTQAILLFTLAFMVILGL 47 (60)
T ss_dssp CCCCSCSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345799999999877777766655444333
No 30
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=26.01 E-value=45 Score=29.62 Aligned_cols=31 Identities=29% Similarity=0.756 Sum_probs=24.5
Q ss_pred CCC-ccCCCCceecCC-ceecCCCceecCCccccC
Q 019341 91 DSC-EPCPSNGECHQG-KLECFHGYRKHGKLCVED 123 (342)
Q Consensus 91 ~~C-~PCP~ha~C~~g-~l~C~~gfvl~~p~CvpD 123 (342)
+.| .+|=-+|.|..- .-.|..||. |+.|+-.
T Consensus 149 ~~C~~~C~ngG~Cv~P~~C~C~~Gw~--G~~C~~~ 181 (188)
T 2ygo_A 149 AECPGGCRNGGFCNERRICECPDGFH--GPHCEGT 181 (188)
T ss_dssp CCCTTCCCTTCEECTTSCEECCTTCB--TTTTCBC
T ss_pred CccCCCCCCCCEeCCCCcccCcCCCC--CCCCcCC
Confidence 556 478889999985 559999997 7888754
No 31
>1pvz_A K+ toxin-like peptide; alpha/beta scaffold; NMR {Mesobuthus martensii} SCOP: g.3.7.2
Probab=25.99 E-value=21 Score=22.73 Aligned_cols=19 Identities=37% Similarity=1.027 Sum_probs=15.5
Q ss_pred CCCc-cCCCCceecCCceec
Q 019341 91 DSCE-PCPSNGECHQGKLEC 109 (342)
Q Consensus 91 ~~C~-PCP~ha~C~~g~l~C 109 (342)
.+|- ||..+|.|.+|+-.|
T Consensus 11 ~~C~~~C~~~gKC~NgkC~C 30 (31)
T 1pvz_A 11 ADCSRKCPGNPPCRNGFCAC 30 (31)
T ss_dssp HHHHHHSSSCCCEETTEESC
T ss_pred HHHHhhhccCCcccCCCcee
Confidence 3465 899999999998766
No 32
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=25.22 E-value=33 Score=23.66 Aligned_cols=24 Identities=33% Similarity=0.857 Sum_probs=17.8
Q ss_pred eecC--Cce--ecCCCceecC--CccccCc
Q 019341 101 ECHQ--GKL--ECFHGYRKHG--KLCVEDG 124 (342)
Q Consensus 101 ~C~~--g~l--~C~~gfvl~~--p~CvpD~ 124 (342)
.|.+ |.. .|.+||.+.+ .+|+.-.
T Consensus 14 ~C~nt~Gsy~C~C~~Gy~L~~d~~~C~did 43 (55)
T 2jkh_L 14 FCHEEQNSVVCSCARGYTLADNGKACIPTG 43 (55)
T ss_dssp EEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred EeEcCCCCeEEeCCCCCEECCCCCeeccCc
Confidence 8987 543 8999999865 6787543
No 33
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=24.53 E-value=22 Score=34.98 Aligned_cols=31 Identities=29% Similarity=0.634 Sum_probs=26.0
Q ss_pred cCCCCceecCCceecCCCceecCCccccCch
Q 019341 95 PCPSNGECHQGKLECFHGYRKHGKLCVEDGD 125 (342)
Q Consensus 95 PCP~ha~C~~g~l~C~~gfvl~~p~CvpD~e 125 (342)
.|=-||.|..|...|++||.-....|.++..
T Consensus 197 ~CsGhG~C~~g~C~Cd~G~~g~d~~C~~~~~ 227 (387)
T 2ddu_A 197 YCSGHGDCISGVCFCDLGYTAAQGTCVSNTP 227 (387)
T ss_dssp GGGGSEEEETTEEEECTTEEEETTEEEESSC
T ss_pred ccCCCceecCCeEEecCCcccCCCccccccc
Confidence 4556999999999999999977678988774
No 34
>1hvw_A Omega-ACTX-HV1A, omega-atracotoxin-HV1A; cystine knot, beta-hairpin; NMR {Synthetic} SCOP: g.3.6.2
Probab=23.80 E-value=36 Score=20.80 Aligned_cols=17 Identities=35% Similarity=0.897 Sum_probs=13.6
Q ss_pred ccCCCCceecCCce---ecC
Q 019341 94 EPCPSNGECHQGKL---ECF 110 (342)
Q Consensus 94 ~PCP~ha~C~~g~l---~C~ 110 (342)
+|||.+..|-.|.- +|+
T Consensus 6 q~Cp~~e~CCSGsCt~~~cd 25 (26)
T 1hvw_A 6 QPCPYNENCCSQSCTGGRCD 25 (26)
T ss_dssp SBCSSTTSBSSCCEETTEEC
T ss_pred CcCCCCcccccccccccccC
Confidence 59999999999863 554
No 35
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=23.07 E-value=50 Score=24.95 Aligned_cols=28 Identities=36% Similarity=0.768 Sum_probs=21.3
Q ss_pred cCCCCceecC----C-c-eecCCCceecCCccccCc
Q 019341 95 PCPSNGECHQ----G-K-LECFHGYRKHGKLCVEDG 124 (342)
Q Consensus 95 PCP~ha~C~~----g-~-l~C~~gfvl~~p~CvpD~ 124 (342)
||-.+|.|.+ + . -.|.+|| .+..|+.|-
T Consensus 55 pC~ngg~C~~~~~~~~~~C~C~~G~--~G~~Ce~~i 88 (91)
T 1tpg_A 55 RCFNGGTCQQALYFSDFVCQCPEGF--AGKSCEIDT 88 (91)
T ss_dssp CSCTTCEEEEESSSSCEEEECCTTC--BSSSCCBCS
T ss_pred CCCCCCEeecCCCCCCeEeECCCCC--cCCcCCcCC
Confidence 7888899984 3 2 3899999 478898653
No 36
>1wz5_A Potassium channel blocking toxin 1; ionic channel inhibitor; HET: ABA; NMR {Pandinus imperator}
Probab=22.70 E-value=33 Score=22.36 Aligned_cols=21 Identities=29% Similarity=0.955 Sum_probs=17.2
Q ss_pred CCCc-cC-----CCCceecCCceecCC
Q 019341 91 DSCE-PC-----PSNGECHQGKLECFH 111 (342)
Q Consensus 91 ~~C~-PC-----P~ha~C~~g~l~C~~ 111 (342)
.+|. || ..+|.|.+|+-.|-+
T Consensus 8 ~~C~~~Ck~~~g~~~gKCmNgkC~Cy~ 34 (35)
T 1wz5_A 8 SDCGRPCQQQTGXPNSKCINRMCKCYG 34 (35)
T ss_dssp TTTHHHHHHHSCSSCCEEETTEEECSC
T ss_pred hHHHHHHHHHHCCCCcceeCCcceecC
Confidence 4576 77 999999999988854
No 37
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=22.49 E-value=44 Score=31.45 Aligned_cols=26 Identities=31% Similarity=0.791 Sum_probs=14.5
Q ss_pred cCCCCceecCC-ceecCCCceecCCcccc
Q 019341 95 PCPSNGECHQG-KLECFHGYRKHGKLCVE 122 (342)
Q Consensus 95 PCP~ha~C~~g-~l~C~~gfvl~~p~Cvp 122 (342)
+|-.||.|.+. .-.|.+||. ++.|+.
T Consensus 154 ~C~~~G~C~~~~~C~C~~G~~--G~~C~~ 180 (324)
T 2ygq_A 154 GCRNGGFCNERRICECPDGFH--GPHCEK 180 (324)
T ss_dssp CCCSSCEECTTSCEECCTTEE--SSSSCE
T ss_pred CCCCCCEECCCCeEECCCCCc--CCCCCC
Confidence 56666666653 336666664 344443
No 38
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=21.96 E-value=36 Score=27.34 Aligned_cols=27 Identities=37% Similarity=0.979 Sum_probs=20.5
Q ss_pred cCCCCceecCC--c--eecCCCceecCCccccC
Q 019341 95 PCPSNGECHQG--K--LECFHGYRKHGKLCVED 123 (342)
Q Consensus 95 PCP~ha~C~~g--~--l~C~~gfvl~~p~CvpD 123 (342)
||..||.|.+. . -.|.+||. +..|+.|
T Consensus 14 ~C~~~g~C~~~~g~~~C~C~~Gy~--G~~C~~~ 44 (135)
T 2vj3_A 14 PCEHAGKCINTLGSFECQCLQGYT--GPRCEID 44 (135)
T ss_dssp SSSTTCEEEECSSSEEEECCTTEE--STTSCEE
T ss_pred CCCCCCEeECCCCCEEEECCCCCc--CCccccc
Confidence 79999999874 2 38999996 5677643
No 39
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=21.72 E-value=45 Score=26.84 Aligned_cols=30 Identities=23% Similarity=0.506 Sum_probs=22.9
Q ss_pred cCCCCceecC--Cc--eecCCCceecC--CccccCc
Q 019341 95 PCPSNGECHQ--GK--LECFHGYRKHG--KLCVEDG 124 (342)
Q Consensus 95 PCP~ha~C~~--g~--l~C~~gfvl~~--p~CvpD~ 124 (342)
||..+|.|.+ |. -.|.+||.... ..|.+..
T Consensus 105 ~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~ 140 (143)
T 2bou_A 105 QCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDT 140 (143)
T ss_dssp CCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBTTC
T ss_pred CCCCCCEEECCCCCEEeeCCCCcccCCCCccCccCC
Confidence 7999999988 33 38999999776 6666543
No 40
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=21.50 E-value=48 Score=30.84 Aligned_cols=56 Identities=18% Similarity=0.403 Sum_probs=32.2
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCCcc------CCC-----Cc--ee-----cCCc--eecCCCceecC---CccccCchh
Q 019341 71 STSKPFCDSNL-LLDSPQSPTDSCEP------CPS-----NG--EC-----HQGK--LECFHGYRKHG---KLCVEDGDI 126 (342)
Q Consensus 71 ~~~~pfCds~~-~~~~~~~~~~~C~P------CP~-----ha--~C-----~~g~--l~C~~gfvl~~---p~CvpD~ek 126 (342)
-+..-.|.++. -.+.-....|.|+. ||. |+ .| ++.. +.|+.||.+.| .+|..|+..
T Consensus 40 G~~~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~p~~~~~~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W 119 (376)
T 2aty_A 40 GEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMW 119 (376)
T ss_pred CCCceEEeccCCCCCeECCCCCccccccCccEeCCCcCCCCeEecCCCCccCCCEEEEECCCCCEECCCcCeEECCCCEE
Confidence 35667887210 00112335689985 874 22 23 1222 49999999988 667777654
No 41
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=21.23 E-value=43 Score=24.81 Aligned_cols=25 Identities=36% Similarity=0.884 Sum_probs=18.0
Q ss_pred CCCCceecC--Cce--ecCCCceecC--Cccc
Q 019341 96 CPSNGECHQ--GKL--ECFHGYRKHG--KLCV 121 (342)
Q Consensus 96 CP~ha~C~~--g~l--~C~~gfvl~~--p~Cv 121 (342)
|. ||.|.+ |.. .|.+||.+.+ .+||
T Consensus 56 C~-~~~C~n~~g~y~C~C~~G~~~~~~~~~Ci 86 (86)
T 1lmj_A 56 CR-GGVCHNTEGSYRCECPPGHQLSPNISACI 86 (86)
T ss_dssp TT-TSEEEEETTEEEEESCTTSCCCSSSCCCC
T ss_pred CC-CCEeEcCCCCEEEECcCCcccCCCCCccC
Confidence 54 799988 443 8999999764 4554
No 42
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=21.14 E-value=37 Score=28.06 Aligned_cols=27 Identities=37% Similarity=0.822 Sum_probs=21.3
Q ss_pred cCCCCceecCC--c--eecCCCceecCCccccC
Q 019341 95 PCPSNGECHQG--K--LECFHGYRKHGKLCVED 123 (342)
Q Consensus 95 PCP~ha~C~~g--~--l~C~~gfvl~~p~CvpD 123 (342)
||..+|.|.+. . -.|.+||. +..|+.+
T Consensus 55 pC~n~g~C~~~~~~y~C~C~~G~~--G~~C~~~ 85 (146)
T 1x7a_L 55 PCLNGGLCKDDINSYECWCQVGFE--GKNCELD 85 (146)
T ss_dssp SSCTTCEEEECSSCEEEECCSSEE--STTTCEE
T ss_pred CCCCCCEeECCCCCEEEecCCCCc--CCcCCCC
Confidence 78889999873 2 39999997 7778765
No 43
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=21.08 E-value=37 Score=28.03 Aligned_cols=26 Identities=27% Similarity=0.719 Sum_probs=20.7
Q ss_pred cCCCCceecC--Cce--ecCCCceec--CCccc
Q 019341 95 PCPSNGECHQ--GKL--ECFHGYRKH--GKLCV 121 (342)
Q Consensus 95 PCP~ha~C~~--g~l--~C~~gfvl~--~p~Cv 121 (342)
||. ||.|.+ |.. .|.+||.+. +..|+
T Consensus 11 ~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~ 42 (162)
T 1uzk_A 11 TCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV 42 (162)
T ss_dssp SSB-TSEEEEETTEEEEECCTTCEECTTSSBEE
T ss_pred CCC-CCEeECCCCCEEEeCCCCCeECCCCCccc
Confidence 685 899998 433 899999986 57887
No 44
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=21.00 E-value=43 Score=35.19 Aligned_cols=19 Identities=26% Similarity=0.777 Sum_probs=10.3
Q ss_pred CCCCceecCCceecCCCce
Q 019341 96 CPSNGECHQGKLECFHGYR 114 (342)
Q Consensus 96 CP~ha~C~~g~l~C~~gfv 114 (342)
|-.||.|.+|.-.|.+||.
T Consensus 536 C~~~G~C~~g~C~C~~Gy~ 554 (690)
T 3fcs_B 536 CSGHGQCSCGDCLCDSDWT 554 (690)
T ss_dssp GGGSEEEETTEEEECTTEE
T ss_pred CCCCCEecCCeeECcCCCc
Confidence 4445555555555555553
Done!