Query 019343
Match_columns 342
No_of_seqs 185 out of 1350
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 14:37:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019343.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019343hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ok3_A Peptidyl-prolyl CIS-tra 100.0 5.4E-37 1.8E-41 270.4 17.6 148 161-329 1-156 (161)
2 2fu0_A Cyclophilin, putative; 100.0 5.7E-37 1.9E-41 270.1 17.6 148 160-328 5-159 (160)
3 2x7k_A Peptidyl-prolyl CIS-tra 100.0 7.9E-37 2.7E-41 270.7 17.5 148 159-327 10-164 (166)
4 2a2n_A Peptidylprolyl isomeras 100.0 2.4E-36 8.2E-41 270.0 18.2 150 157-327 18-175 (176)
5 2poe_A Cyclophilin-like protei 100.0 2.6E-36 8.7E-41 271.8 17.8 151 158-329 14-175 (185)
6 2b71_A Cyclophilin-like protei 100.0 5E-36 1.7E-40 272.0 17.8 149 159-328 37-192 (196)
7 1zkc_A Peptidyl-prolyl CIS-tra 100.0 8.7E-36 3E-40 270.6 18.4 151 157-328 16-174 (197)
8 3bo7_A Peptidyl-prolyl CIS-tra 100.0 8E-36 2.7E-40 271.7 17.8 138 158-309 4-160 (201)
9 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.1E-35 3.6E-40 271.1 16.0 151 159-330 10-167 (203)
10 1w74_A Peptidyl-prolyl CIS-tra 100.0 7.1E-35 2.4E-39 263.5 17.9 148 156-327 19-190 (191)
11 1v9t_A Cyclophilin B; beta bar 100.0 6.9E-35 2.4E-39 258.1 16.3 148 158-327 2-164 (166)
12 3s6m_A Peptidyl-prolyl CIS-tra 100.0 6.4E-35 2.2E-39 258.3 15.5 149 159-327 2-166 (167)
13 2hq6_A Serologically defined c 100.0 5.8E-34 2E-38 256.4 17.6 151 155-327 19-178 (185)
14 1mzw_A Cyclophilin H, U-snRNP- 100.0 6.8E-34 2.3E-38 254.3 17.8 146 159-325 9-174 (177)
15 1lop_A Cyclophilin A; rotamase 100.0 2.4E-34 8.1E-39 254.2 14.4 144 162-327 1-162 (164)
16 2cmt_A Peptidyl-prolyl CIS-tra 100.0 9.3E-34 3.2E-38 252.4 18.1 146 158-325 8-168 (172)
17 2r99_A Peptidyl-prolyl CIS-tra 100.0 2.2E-33 7.4E-38 250.2 18.6 144 160-325 11-169 (173)
18 2wfi_A Peptidyl-prolyl CIS-tra 100.0 1.2E-33 4.1E-38 253.1 16.5 139 166-325 20-176 (179)
19 1a58_A Cyclophilin; isomerase, 100.0 3.2E-33 1.1E-37 249.9 18.7 145 160-325 6-173 (177)
20 3ich_A Peptidyl-prolyl CIS-tra 100.0 3.4E-33 1.2E-37 252.0 18.1 139 167-327 27-176 (188)
21 1qng_A Peptidyl-prolyl CIS-tra 100.0 2.9E-33 1E-37 248.6 17.2 144 160-325 3-167 (170)
22 2z6w_A Peptidyl-prolyl CIS-tra 100.0 4.4E-33 1.5E-37 246.4 18.1 143 161-325 4-161 (165)
23 3bkp_A Cyclophilin; malaria, i 100.0 2.9E-33 9.8E-38 259.9 17.5 153 155-327 16-191 (232)
24 2igv_A Peptidyl-prolyl CIS-tra 100.0 4.5E-33 1.5E-37 248.1 17.9 144 160-325 3-168 (173)
25 2haq_A Cyclophilin; rotamase, 100.0 4.7E-33 1.6E-37 247.9 17.6 138 166-325 22-169 (172)
26 3pmp_A Cyclophilin A; peptidyl 100.0 5.9E-33 2E-37 245.2 18.0 137 167-325 14-160 (164)
27 2he9_A NK-tumor recognition pr 100.0 7.3E-33 2.5E-37 250.6 18.9 140 166-326 30-187 (192)
28 4fru_A Cyclophilin B, peptidyl 100.0 9.4E-33 3.2E-37 248.4 18.1 147 158-325 10-171 (185)
29 2poy_A Peptidyl-prolyl CIS-tra 100.0 1.2E-32 4.3E-37 247.9 17.6 146 158-325 17-184 (186)
30 3rdd_A Peptidyl-prolyl CIS-tra 100.0 1.5E-32 5E-37 247.0 17.9 145 159-325 21-180 (184)
31 1z81_A Cyclophilin; structural 100.0 1.3E-32 4.5E-37 254.8 17.9 161 145-325 43-226 (229)
32 3k2c_A Peptidyl-prolyl CIS-tra 100.0 3.3E-32 1.1E-36 246.5 18.3 146 159-326 26-188 (193)
33 2c3b_A Ppiase, cyclophilin; is 100.0 6.6E-33 2.2E-37 246.9 10.6 140 165-325 17-169 (172)
34 2ose_A Probable peptidyl-proly 100.0 9.1E-32 3.1E-36 250.1 16.1 146 159-328 13-206 (234)
35 1ihg_A Cyclophilin 40; ppiase 100.0 1.7E-30 5.9E-35 253.0 17.7 147 160-328 15-184 (370)
36 3rfy_A Peptidyl-prolyl CIS-tra 99.9 1.1E-28 3.7E-33 242.1 6.7 140 159-301 169-345 (369)
37 2nnz_A Hypothetical protein; b 93.8 0.1 3.5E-06 45.0 6.2 103 160-297 29-141 (153)
38 2yil_A Microneme antigen L2; s 91.8 0.11 3.7E-06 44.2 3.3 38 83-134 25-62 (138)
39 4a5v_A MIC4, micronemal protei 91.3 0.21 7.1E-06 43.2 4.7 56 64-136 83-139 (161)
40 2yil_A Microneme antigen L2; s 91.1 0.15 5.1E-06 43.3 3.5 55 64-136 81-135 (138)
41 2f83_A Coagulation factor XI; 90.1 0.31 1E-05 50.4 5.6 63 65-137 22-85 (625)
42 2f83_A Coagulation factor XI; 90.1 0.39 1.3E-05 49.7 6.3 66 64-139 109-176 (625)
43 4a5v_A MIC4, micronemal protei 89.9 0.29 9.9E-06 42.3 4.4 56 64-135 10-65 (161)
44 3kop_A Uncharacterized protein 89.2 1.5 5.2E-05 38.8 8.4 45 161-205 22-74 (188)
45 1zx8_A Hypothetical protein TM 83.4 3.7 0.00013 34.6 7.6 101 160-297 12-122 (136)
46 3j1r_A Archaeal adhesion filam 58.6 9.5 0.00033 23.1 2.9 21 15-35 6-26 (26)
47 2ll3_A Micronemal protein 4; c 37.4 18 0.00061 27.8 2.3 45 76-134 12-63 (82)
48 2p0o_A Hypothetical protein DU 29.9 31 0.001 33.6 3.1 48 251-299 298-350 (372)
49 2x5r_A Hypothetical protein OR 28.1 65 0.0022 25.4 4.2 57 259-330 2-59 (127)
50 1x7f_A Outer surface protein; 25.8 49 0.0017 32.3 3.8 48 251-299 324-376 (385)
No 1
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=5.4e-37 Score=270.44 Aligned_cols=148 Identities=26% Similarity=0.412 Sum_probs=127.3
Q ss_pred cEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccccccccC
Q 019343 161 GIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGTLEAL 238 (342)
Q Consensus 161 ~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg~~~~ 238 (342)
+.|+|+|+.|+|+|+||++.||++|+||++||+.+||+|+.||||+++ +|+||+.+. +.|+.+.+
T Consensus 1 m~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~-------------g~gg~si~ 67 (161)
T 2ok3_A 1 MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGT-------------GRGGNSIW 67 (161)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSS-------------SSCCCCTT
T ss_pred CEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCC-------------CCCCCccc
Confidence 479999999999999999999999999999999999999999999988 888877753 34566777
Q ss_pred CCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCC-CcCccc
Q 019343 239 GTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSD-VWNNIN 312 (342)
Q Consensus 239 g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~-~~~~i~ 312 (342)
+..++++.....+|+++|+||||++| |||||++++.++||++|+|||+|+ +||+||++|++++++++ +
T Consensus 68 g~~~~dE~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv-~G~dvv~~I~~~~~~~~~~----- 141 (161)
T 2ok3_A 68 GKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVI-DGLETLDELEKLPVNEKTY----- 141 (161)
T ss_dssp SSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTCCBCTTTC-----
T ss_pred CCccccccCcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEe-CCHHHHHHHHhCCccCCCC-----
Confidence 77776533233467799999999864 799999999999999999999999 99999999999999876 4
Q ss_pred cccccCCeEEEEEeccC
Q 019343 313 VTVLKKPVPLRLRRLKK 329 (342)
Q Consensus 313 v~v~~~PV~i~~~r~~~ 329 (342)
.|.+||.|..+.+..
T Consensus 142 --~P~~~v~I~~~~i~~ 156 (161)
T 2ok3_A 142 --RPLNDVHIKDITIHA 156 (161)
T ss_dssp --CBSSCCBEEEEEEEC
T ss_pred --CcCCCeEEEEEEEec
Confidence 677888887766543
No 2
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=5.7e-37 Score=270.14 Aligned_cols=148 Identities=22% Similarity=0.200 Sum_probs=127.0
Q ss_pred ccEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCcccccccccc
Q 019343 160 QGIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGTLEA 237 (342)
Q Consensus 160 ~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg~~~ 237 (342)
...|+|+|+.|+|+|+||++.||++|+||++||+.+||+|+.||||+++ +|+||+.+. +.|+.++
T Consensus 5 ~~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~-------------g~gg~si 71 (160)
T 2fu0_A 5 PKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGD-------------GTGGESI 71 (160)
T ss_dssp CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSS-------------SSCCCCT
T ss_pred CCEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCC-------------CCCCCcc
Confidence 5689999999999999999999999999999999999999999999988 888887653 3455566
Q ss_pred CCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCCCcCccc
Q 019343 238 LGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSDVWNNIN 312 (342)
Q Consensus 238 ~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~~~~~i~ 312 (342)
|+..++++.....+|.++|+||||++| |||||++++.|+||++|+|||+|+ +||+||++|++++++.++
T Consensus 72 ~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv-~G~dvv~~I~~~~t~~~~----- 145 (160)
T 2fu0_A 72 WGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVT-QGSKIVLDIEKVRTDKRD----- 145 (160)
T ss_dssp TSSCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSCBCTTS-----
T ss_pred cCCCccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEE-cCHHHHHHHHhCCcCCCC-----
Confidence 777775533223456789999999864 799999999999999999999999 999999999999998765
Q ss_pred cccccCCeEEEEEecc
Q 019343 313 VTVLKKPVPLRLRRLK 328 (342)
Q Consensus 313 v~v~~~PV~i~~~r~~ 328 (342)
.|.+||.|..+++.
T Consensus 146 --~P~~~v~I~~~~v~ 159 (160)
T 2fu0_A 146 --KPLEDIKILNIKIN 159 (160)
T ss_dssp --CBSSCCBEEEEEEC
T ss_pred --CcCCCeEEEEEEEe
Confidence 67788888776653
No 3
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=7.9e-37 Score=270.70 Aligned_cols=148 Identities=24% Similarity=0.279 Sum_probs=127.2
Q ss_pred CccEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccccccc
Q 019343 159 GQGIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGTLE 236 (342)
Q Consensus 159 ~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg~~ 236 (342)
.++.|.|+|+.|+|+|+||++.||++|+||++||+.+||+|+.||||+++ +|+||+.+. +.|+.+
T Consensus 10 ~~~~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~-------------g~gg~s 76 (166)
T 2x7k_A 10 QPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGT-------------GRGGAS 76 (166)
T ss_dssp CCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSS-------------SSCCCC
T ss_pred CCCEEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCC-------------CCCCCc
Confidence 45799999999999999999999999999999999999999999999988 888877653 345666
Q ss_pred cCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCCCcCcc
Q 019343 237 ALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSDVWNNI 311 (342)
Q Consensus 237 ~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~~~~~i 311 (342)
.++..++++.....+|.++|+||||++| |||||++++.++||++|+|||+|+ +||+||++|+++++++++
T Consensus 77 i~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv-~G~dvv~~I~~~~t~~~~---- 151 (166)
T 2x7k_A 77 IYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVC-QGIGMVNRVGMVETNSQD---- 151 (166)
T ss_dssp TTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHTTSCBCTTS----
T ss_pred cCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEE-cCHHHHHHHHcCCcCCCC----
Confidence 7777775533223456689999999864 799999999999999999999999 999999999999998865
Q ss_pred ccccccCCeEEEEEec
Q 019343 312 NVTVLKKPVPLRLRRL 327 (342)
Q Consensus 312 ~v~v~~~PV~i~~~r~ 327 (342)
.|.+||.|..+.+
T Consensus 152 ---~P~~~i~I~~~~i 164 (166)
T 2x7k_A 152 ---RPVDDVKIIKAYP 164 (166)
T ss_dssp ---CBSSCCEEEEEEE
T ss_pred ---CcCCCeEEEEEEE
Confidence 6778888877654
No 4
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=2.4e-36 Score=269.98 Aligned_cols=150 Identities=23% Similarity=0.269 Sum_probs=127.9
Q ss_pred cCCccEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccccc
Q 019343 157 GKGQGIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGT 234 (342)
Q Consensus 157 ~~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg 234 (342)
.+....|+++|+.|+|+|+||++.||++|+||++||+.+||+|+.||||+++ +|+||+.+. +.|+
T Consensus 18 ~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~-------------g~gg 84 (176)
T 2a2n_A 18 KRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGT-------------GMGG 84 (176)
T ss_dssp CCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSS-------------SSCC
T ss_pred CCCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCC-------------CCCC
Confidence 3456789999999999999999999999999999999999999999999988 888887653 2455
Q ss_pred cccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCC-CCCc
Q 019343 235 LEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTK-SDVW 308 (342)
Q Consensus 235 ~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td-~~~~ 308 (342)
.+.|+..|+++.....+|.++|+||||++| |||||++.+.++||++|+|||+|+ +||+||++|++++++ .++
T Consensus 85 ~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I~~~~t~~~~~- 162 (176)
T 2a2n_A 85 ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVT-KGMEVVQRISNVKVNPKTD- 162 (176)
T ss_dssp CCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSCBCTTTC-
T ss_pred CcccCCccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEe-CCHHHHHHHHcCCccCCCC-
Confidence 567777775533223457789999999864 799999999999999999999999 999999999999998 344
Q ss_pred CccccccccCCeEEEEEec
Q 019343 309 NNINVTVLKKPVPLRLRRL 327 (342)
Q Consensus 309 ~~i~v~v~~~PV~i~~~r~ 327 (342)
.|.+||.|..+++
T Consensus 163 ------~P~~~v~I~~v~v 175 (176)
T 2a2n_A 163 ------KPYEDVSIINITV 175 (176)
T ss_dssp ------CBSSCCBEEEEEE
T ss_pred ------ccCCCeEEEEEEE
Confidence 6778999887765
No 5
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=2.6e-36 Score=271.76 Aligned_cols=151 Identities=21% Similarity=0.280 Sum_probs=129.2
Q ss_pred CCccEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCcccccccc
Q 019343 158 KGQGIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGTL 235 (342)
Q Consensus 158 ~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg~ 235 (342)
...+.|.|+|+.|+|+|+||++.||++|+||++||+.+||+|+.||||+++ +|+||+.+. +.|+.
T Consensus 14 ~~~~~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~-------------g~gg~ 80 (185)
T 2poe_A 14 LYFQGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGT-------------GKGGE 80 (185)
T ss_dssp -CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSS-------------SSCCC
T ss_pred CCceEEEEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCC-------------CCCCC
Confidence 446789999999999999999999999999999999999999999999988 888887753 34566
Q ss_pred ccCCCccCCCCCCCCCCCCCcEEEEeCCC---------CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCC
Q 019343 236 EALGTAFKKIPREVCPSIRRGSVAWIGSG---------PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSD 306 (342)
Q Consensus 236 ~~~g~~~~~ip~E~~~~~~rG~Vsma~sG---------sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~ 306 (342)
+.|+..|+++.....+|.++|+||||++| |||||++++.++||++|||||+|+ +||+||++|++++++.+
T Consensus 81 si~g~~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I~~~~t~~~ 159 (185)
T 2poe_A 81 SIYGRYFDDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLI-DGFETLNTLENCPSDKS 159 (185)
T ss_dssp BTTBSCBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHHSCBCTT
T ss_pred ccCCCcccccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEe-CCHHHHHHHHhCCcCCC
Confidence 67777776533233456789999999876 699999999999999999999999 99999999999999876
Q ss_pred CcCccccccccCCeEEEEEeccC
Q 019343 307 VWNNINVTVLKKPVPLRLRRLKK 329 (342)
Q Consensus 307 ~~~~i~v~v~~~PV~i~~~r~~~ 329 (342)
+ .|.+||.|..+.+-.
T Consensus 160 ~-------~P~~~v~I~~~~i~~ 175 (185)
T 2poe_A 160 H-------KPIDEIIIKDIVIHS 175 (185)
T ss_dssp S-------CBSSCCEEEEEEEEC
T ss_pred C-------CcCCCeEEEEEEEEC
Confidence 5 677899887766654
No 6
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=5e-36 Score=272.02 Aligned_cols=149 Identities=20% Similarity=0.271 Sum_probs=128.6
Q ss_pred CccEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccccccc
Q 019343 159 GQGIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGTLE 236 (342)
Q Consensus 159 ~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg~~ 236 (342)
.++.|.|+|+.|+|+|+||++.||++|+||++||+.+||+|+.||||+++ +|+||+.+. +.|+.+
T Consensus 37 ~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~-------------g~gg~s 103 (196)
T 2b71_A 37 ERGYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGT-------------GKGGKS 103 (196)
T ss_dssp HSCEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSS-------------SSCCCB
T ss_pred CCcEEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCC-------------CCCCCc
Confidence 45799999999999999999999999999999999999999999999988 888887753 345666
Q ss_pred cCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCCCcCcc
Q 019343 237 ALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSDVWNNI 311 (342)
Q Consensus 237 ~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~~~~~i 311 (342)
.++..|+++.....+|.++|+||||++| |||||++++.++||++|+|||+|+ +||+||++|++++++.++
T Consensus 104 i~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I~~~~t~~~~---- 178 (196)
T 2b71_A 104 IYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVS-KNMTCIENIASVQTTATN---- 178 (196)
T ss_dssp TTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSCBCTTC----
T ss_pred cCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEe-cCHHHHHHHHhCCcCCCC----
Confidence 7777776533333567789999999864 799999999999999999999999 999999999999998765
Q ss_pred ccccccCCeEEEEEecc
Q 019343 312 NVTVLKKPVPLRLRRLK 328 (342)
Q Consensus 312 ~v~v~~~PV~i~~~r~~ 328 (342)
.|.+||.|..+.+-
T Consensus 179 ---~P~~~i~I~~~~i~ 192 (196)
T 2b71_A 179 ---KPIFDLKILRTSTA 192 (196)
T ss_dssp ---CBSSCCEEEEEEC-
T ss_pred ---CCCCCeEEEEEEEe
Confidence 67789988777654
No 7
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=8.7e-36 Score=270.63 Aligned_cols=151 Identities=22% Similarity=0.332 Sum_probs=128.8
Q ss_pred cCCccEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccccc
Q 019343 157 GKGQGIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGT 234 (342)
Q Consensus 157 ~~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg 234 (342)
.+....|+|+|+.|+|+|+||++.||++|+||++||+.+||+|+.||||+++ +|+||+.+. +.|+
T Consensus 16 ~~~~~~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~-------------g~Gg 82 (197)
T 1zkc_A 16 PRGSGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGT-------------GTGG 82 (197)
T ss_dssp CCSCEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSS-------------SSCC
T ss_pred CCCCcEEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCC-------------CCCC
Confidence 3557799999999999999999999999999999999999999999999988 888877653 3456
Q ss_pred cccCCCccCCCCCCCCCCCCCcEEEEeCC-----CCcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCC-Cc
Q 019343 235 LEALGTAFKKIPREVCPSIRRGSVAWIGS-----GPEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSD-VW 308 (342)
Q Consensus 235 ~~~~g~~~~~ip~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~-~~ 308 (342)
.+.++..|+++.+....|.++|+||||++ ||||||++++.++||++|||||+|+ +||+||++|++++++.+ +
T Consensus 83 ~si~g~~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I~~~~t~~~~~- 160 (197)
T 1zkc_A 83 ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVV-GGFDVLTAMENVESDPKTD- 160 (197)
T ss_dssp CBTTBSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHHSCBCTTTC-
T ss_pred CccCCCccccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEE-cCHHHHHHHHcCCCCCCCC-
Confidence 66777777653333345678999999986 4799999999999999999999999 99999999999999875 4
Q ss_pred CccccccccCCeEEEEEecc
Q 019343 309 NNINVTVLKKPVPLRLRRLK 328 (342)
Q Consensus 309 ~~i~v~v~~~PV~i~~~r~~ 328 (342)
.|.+||.|..+.+-
T Consensus 161 ------~P~~~i~I~~~~v~ 174 (197)
T 1zkc_A 161 ------RPKEEIRIDATTVF 174 (197)
T ss_dssp ------CBSSCCEEEEEEEE
T ss_pred ------CcCCCeEEEEEEEE
Confidence 67788888766553
No 8
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=8e-36 Score=271.67 Aligned_cols=138 Identities=22% Similarity=0.328 Sum_probs=113.1
Q ss_pred CCccEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--Cccc-----CCCCCccCCCCCCCCccc
Q 019343 158 KGQGIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSW-----DIEGNHIKNAPYGPPFGL 230 (342)
Q Consensus 158 ~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~G-----D~~g~~i~~~q~G~p~~~ 230 (342)
+.+..|+|+|+.|+|+|+||++.||+||+||++||+.+||+|+.||||+++ +|+| |+.+.
T Consensus 4 ~~~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~------------- 70 (201)
T 3bo7_A 4 KKKGYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKK------------- 70 (201)
T ss_dssp -CCEEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC----------------
T ss_pred CCceEEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCC-------------
Confidence 456789999999999999999999999999999999999999999999988 8888 66642
Q ss_pred cccccccC-------CCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHH
Q 019343 231 IQGTLEAL-------GTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKI 298 (342)
Q Consensus 231 iqGg~~~~-------g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI 298 (342)
+.|+.+.| +..|+++.....+|.++|+||||++| |||||++++.++||++|||||+|+ +||+||++|
T Consensus 71 g~gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I 149 (201)
T 3bo7_A 71 KEVQQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVV-GGLDVLRQW 149 (201)
T ss_dssp ----CCSSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHH
T ss_pred CCCCccccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEe-cCHHHHHHH
Confidence 34454555 55554432223456689999999854 799999999999999999999999 999999999
Q ss_pred hcCCCCCCCcC
Q 019343 299 AQLPTKSDVWN 309 (342)
Q Consensus 299 ~~~~td~~~~~ 309 (342)
++++++.+++|
T Consensus 150 ~~~~t~~~~~P 160 (201)
T 3bo7_A 150 EKLETDKKDKP 160 (201)
T ss_dssp TTCCBCTTSCB
T ss_pred HhCCcCCCCCc
Confidence 99999987643
No 9
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=271.15 Aligned_cols=151 Identities=23% Similarity=0.272 Sum_probs=129.6
Q ss_pred CccEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccccccc
Q 019343 159 GQGIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGTLE 236 (342)
Q Consensus 159 ~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg~~ 236 (342)
..+.|.|+|+.|+|+|+||++.||++|+||++||+.+||+|+.||||+++ +|+||+.+. ..|+.+
T Consensus 10 ~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~-------------g~gg~s 76 (203)
T 2k7n_A 10 QPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGT-------------GRGGAS 76 (203)
T ss_dssp CCSEEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSS-------------SSCCCT
T ss_pred CCCEEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCC-------------CCCCCc
Confidence 45799999999999999999999999999999999999999999999988 888887753 245556
Q ss_pred cCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCCCcCcc
Q 019343 237 ALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSDVWNNI 311 (342)
Q Consensus 237 ~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~~~~~i 311 (342)
+++..|+++.....+|.++|+|+||++| |||||++.+.++||++|+|||+|+ +||+||++|++++++.+.
T Consensus 77 i~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~Vv-eGmdvv~kI~~~~t~~~~---- 151 (203)
T 2k7n_A 77 IYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVC-QGIGMVNRVGMVETNSQD---- 151 (203)
T ss_dssp TSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEE-SCHHHHHHHHSCCEEETT----
T ss_pred cCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEE-cCHHHHHHHHcCCcCCCC----
Confidence 6777775533223456689999999865 699999999999999999999999 999999999999998765
Q ss_pred ccccccCCeEEEEEeccCC
Q 019343 312 NVTVLKKPVPLRLRRLKKS 330 (342)
Q Consensus 312 ~v~v~~~PV~i~~~r~~~~ 330 (342)
.|.+||.|..+.+-..
T Consensus 152 ---~P~~~V~I~~~~v~~~ 167 (203)
T 2k7n_A 152 ---RPVDDVKIIKAYPSGG 167 (203)
T ss_dssp ---EECCCCBEEEEEECCC
T ss_pred ---CcCCCeEEEEEEEEec
Confidence 6889999987776554
No 10
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=7.1e-35 Score=263.52 Aligned_cols=148 Identities=25% Similarity=0.311 Sum_probs=123.1
Q ss_pred ecCCccEEEEEEeceeEEEEECCCCChHHHHHHHHHh---------------hCCCcCCceeeEeeeC--CcccCCCCCc
Q 019343 156 FGKGQGIVGLETEYGTLHIKLFPECAPHSVAYILELL---------------SLRHCAGCQFHRAESR--GQSWDIEGNH 218 (342)
Q Consensus 156 ~~~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~---------------~~g~Ydg~~F~Rv~~~--~q~GD~~g~~ 218 (342)
.+..+..|+|+|+.|+|+|+||++.||++|+||++|| +.+||+|+.||||+++ +|+||+.+.
T Consensus 19 ~~~~~~~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g~- 97 (191)
T 1w74_A 19 SPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGT- 97 (191)
T ss_dssp --CCSEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTSS-
T ss_pred CCCCCeEEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCCCC-
Confidence 4556789999999999999999999999999999999 4689999999999988 888887653
Q ss_pred cCCCCCCCCccccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcc--c
Q 019343 219 IKNAPYGPPFGLIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQ--N 291 (342)
Q Consensus 219 i~~~q~G~p~~~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~e--G 291 (342)
+.|+ ++..|+++.+...+|.++|+|||||+| |||||++.+.++||++|+|||+|+ + |
T Consensus 98 ------------G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv-~~~G 161 (191)
T 1w74_A 98 ------------GRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVI-DAES 161 (191)
T ss_dssp ------------SSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEC-SHHH
T ss_pred ------------CCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEE-ECCC
Confidence 1232 455554432223467789999999964 799999999999999999999999 8 9
Q ss_pred HHHHHHHhcCCCCCCCcCccccccccCCeEEEEEec
Q 019343 292 MEIVEKIAQLPTKSDVWNNINVTVLKKPVPLRLRRL 327 (342)
Q Consensus 292 mdVldkI~~~~td~~~~~~i~v~v~~~PV~i~~~r~ 327 (342)
|+||++|++++++.++ .|.+||.|..+.+
T Consensus 162 mdvv~~I~~~~t~~~~-------~P~~~v~I~~~~i 190 (191)
T 1w74_A 162 QRVVEAISKTATDGND-------RPTDPVVIESITI 190 (191)
T ss_dssp HHHHHHHHTSCBCTTS-------CBSSCCEEEEEEE
T ss_pred HHHHHHHHcCCcCCCC-------CcCCCeEEEEEEE
Confidence 9999999999998765 6778888877654
No 11
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=6.9e-35 Score=258.09 Aligned_cols=148 Identities=25% Similarity=0.348 Sum_probs=122.3
Q ss_pred CCccEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCcccccccc
Q 019343 158 KGQGIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGTL 235 (342)
Q Consensus 158 ~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg~ 235 (342)
++++.|.|+|+.|+|+|+||++.||+||+||++||+.+||+|+.||||+++ +|+||+.+.. +.
T Consensus 2 ~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~---------------~~ 66 (166)
T 1v9t_A 2 KGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQM---------------QQ 66 (166)
T ss_dssp CCSCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTC---------------CB
T ss_pred CCCeEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCC---------------CC
Confidence 567899999999999999999999999999999999999999999999988 8888877531 01
Q ss_pred ccCCCccCCCCCCC--CCCCCCcEEEEeCC------CCcEEEEcCCCCCCCCC-----ceEEEEEEcccHHHHHHHhcCC
Q 019343 236 EALGTAFKKIPREV--CPSIRRGSVAWIGS------GPEFFISLSNHEEWKNS-----YTVFGSVLPQNMEIVEKIAQLP 302 (342)
Q Consensus 236 ~~~g~~~~~ip~E~--~~~~~rG~Vsma~s------GsqFFItL~d~p~Ldg~-----~TVFG~Vv~eGmdVldkI~~~~ 302 (342)
..++.++ ++|. ..++++|+||||++ ||||||++.+.++||++ |||||+|+ +||+||++|++++
T Consensus 67 ~~~g~~~---~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv-~G~dvv~~I~~~~ 142 (166)
T 1v9t_A 67 KKPNPPI---KNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVV-KGMDVADKISQVP 142 (166)
T ss_dssp CCCCCCB---CCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEE-ECHHHHHHHHTSC
T ss_pred CCCCCcc---cccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEe-cCHHHHHHHHhCC
Confidence 1223344 3443 24678999999984 37999999999999998 99999999 9999999999999
Q ss_pred CCCCCcCccccccccCCeEEEEEec
Q 019343 303 TKSDVWNNINVTVLKKPVPLRLRRL 327 (342)
Q Consensus 303 td~~~~~~i~v~v~~~PV~i~~~r~ 327 (342)
+++.+ ....+|.+||.|..+.+
T Consensus 143 ~~~~~---~~~~~P~~~v~I~~~~v 164 (166)
T 1v9t_A 143 THDVG---PYQNVPSKPVVILSATV 164 (166)
T ss_dssp EEEET---TEEEEESSCCBEEEEEE
T ss_pred CCCCC---ccCCCcCCCeEEEEEEE
Confidence 98632 11247889999987765
No 12
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=6.4e-35 Score=258.34 Aligned_cols=149 Identities=23% Similarity=0.310 Sum_probs=119.6
Q ss_pred CccEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccccccc
Q 019343 159 GQGIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGTLE 236 (342)
Q Consensus 159 ~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg~~ 236 (342)
+.+.|+|+|+.|+|+|+||++.||+||+||++||+.+||+|+.||||+++ +|+||+.+.. +..
T Consensus 2 p~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~---------------~~~ 66 (167)
T 3s6m_A 2 PGSMVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGL---------------KQK 66 (167)
T ss_dssp CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTT---------------EEC
T ss_pred CCcEEEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCC---------------CCC
Confidence 46799999999999999999999999999999999999999999999988 7777776421 112
Q ss_pred cCCCccCCCCCCCCCCCCCcEEEEeC-C-----CCcEEEEcCCCCCCCCC--------ceEEEEEEcccHHHHHHHhcCC
Q 019343 237 ALGTAFKKIPREVCPSIRRGSVAWIG-S-----GPEFFISLSNHEEWKNS--------YTVFGSVLPQNMEIVEKIAQLP 302 (342)
Q Consensus 237 ~~g~~~~~ip~E~~~~~~rG~Vsma~-s-----GsqFFItL~d~p~Ldg~--------~TVFG~Vv~eGmdVldkI~~~~ 302 (342)
.++..++++.. ...++++|+||||+ + ||||||++.+.++||++ |+|||+|+ +||+||++|++++
T Consensus 67 ~~~~~~~~E~~-~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv-~G~dvv~~I~~~~ 144 (167)
T 3s6m_A 67 PTDAPIANEAN-NGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVV-EGQDIVDKIKAVK 144 (167)
T ss_dssp CCCCCBCCCGG-GCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEE-ECHHHHHHHTTSC
T ss_pred CCCCccCCccc-ccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEE-cCHHHHHHHHcCC
Confidence 23334433211 12356899999998 3 47999999999999998 99999999 9999999999999
Q ss_pred CCCCCcCccccccccCCeEEEEEec
Q 019343 303 TKSDVWNNINVTVLKKPVPLRLRRL 327 (342)
Q Consensus 303 td~~~~~~i~v~v~~~PV~i~~~r~ 327 (342)
+++.+. .-..|.+||.|..+.+
T Consensus 145 t~~~~~---~~~~P~~~v~I~~~~i 166 (167)
T 3s6m_A 145 TGSKGF---HQDVPNDDVVIEKAVV 166 (167)
T ss_dssp BBC------CBTCBSSCCEEEEEEE
T ss_pred cCCCcc---cCCCcCCCeEEEEEEE
Confidence 987320 1137889999987654
No 13
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=5.8e-34 Score=256.41 Aligned_cols=151 Identities=25% Similarity=0.321 Sum_probs=126.2
Q ss_pred eecCCccEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccc
Q 019343 155 IFGKGQGIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQ 232 (342)
Q Consensus 155 ~~~~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iq 232 (342)
..++.+..|.|+|+.|+|+|+||++.||++|+||++||+.+||+|+.||||+++ +|+||+.+. +.
T Consensus 19 ~~~~~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~-------------g~ 85 (185)
T 2hq6_A 19 SEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGT-------------GS 85 (185)
T ss_dssp CCCCCBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSS-------------SS
T ss_pred cCCCCCCEEEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCC-------------CC
Confidence 345567899999999999999999999999999999999999999999999988 888887653 34
Q ss_pred cccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHH--HHHHhcCCCCC
Q 019343 233 GTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEI--VEKIAQLPTKS 305 (342)
Q Consensus 233 Gg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdV--ldkI~~~~td~ 305 (342)
|+.+.++..++++.....+++++|+||||++| |||||++++.++||++|+|||+|+ ||+| +++|++++++.
T Consensus 86 gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~--G~~v~~~~~i~~~~~~~ 163 (185)
T 2hq6_A 86 GGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT--GDTVYNMLRLSEVDIDD 163 (185)
T ss_dssp CCCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC--GGGHHHHHHTTCSCBCT
T ss_pred CCCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE--eCeeehhhHHhhCCcCC
Confidence 56667777776533333457789999999964 799999999999999999999998 5654 67899999987
Q ss_pred CCcCccccccccCCeEEEEEec
Q 019343 306 DVWNNINVTVLKKPVPLRLRRL 327 (342)
Q Consensus 306 ~~~~~i~v~v~~~PV~i~~~r~ 327 (342)
++ .|.+||.|..+.+
T Consensus 164 ~~-------~P~~~v~I~~~~v 178 (185)
T 2hq6_A 164 DE-------RPHNPHKIKSCEV 178 (185)
T ss_dssp TS-------CBSSCCEEEEEEE
T ss_pred CC-------CCCCCeEEEEEEE
Confidence 66 6778888876654
No 14
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=6.8e-34 Score=254.27 Aligned_cols=146 Identities=22% Similarity=0.301 Sum_probs=123.1
Q ss_pred CccEEEEE-----EeceeEEEEECCCCChHHHHHHHHHhhCCC--------cCCceeeEeeeC--CcccCCCCCccCCCC
Q 019343 159 GQGIVGLE-----TEYGTLHIKLFPECAPHSVAYILELLSLRH--------CAGCQFHRAESR--GQSWDIEGNHIKNAP 223 (342)
Q Consensus 159 ~~~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~--------Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q 223 (342)
.++.|.|+ |+.|+|+||||++.||+||+||++||+.+| |+|+.||||+++ +|+||+...
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~------ 82 (177)
T 1mzw_A 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNG------ 82 (177)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTS------
T ss_pred CCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccC------
Confidence 45677777 469999999999999999999999999998 999999999998 888887521
Q ss_pred CCCCccccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHH
Q 019343 224 YGPPFGLIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKI 298 (342)
Q Consensus 224 ~G~p~~~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI 298 (342)
.+.|+.++++..|+++ ....+|.++|+||||++| |||||++++.++||++|+|||+|+ +||+||++|
T Consensus 83 ------~G~gg~si~g~~f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv-~G~dvv~~I 154 (177)
T 1mzw_A 83 ------DGTGVASIYRGPFADE-NFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKII-DGLLVMRKI 154 (177)
T ss_dssp ------SSCCCCCTTSSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHH
T ss_pred ------CCCCCCccCCCcccCc-ccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEe-CCHHHHHHH
Confidence 2345666777777653 223567789999999864 799999999999999999999999 999999999
Q ss_pred hcCCCCCCCcCccccccccCCeEEEEE
Q 019343 299 AQLPTKSDVWNNINVTVLKKPVPLRLR 325 (342)
Q Consensus 299 ~~~~td~~~~~~i~v~v~~~PV~i~~~ 325 (342)
++++++.++ .|.+||.|..+
T Consensus 155 ~~~~t~~~~-------~P~~~v~I~~c 174 (177)
T 1mzw_A 155 ENVPTGPNN-------KPKLPVVISQC 174 (177)
T ss_dssp HTSCBCGGG-------CBSSCEEEEEE
T ss_pred HhCCcCCCC-------CCCCCEEEEec
Confidence 999998765 67788888654
No 15
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=2.4e-34 Score=254.18 Aligned_cols=144 Identities=26% Similarity=0.339 Sum_probs=118.4
Q ss_pred EEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccccccccCC
Q 019343 162 IVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGTLEALG 239 (342)
Q Consensus 162 ~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg~~~~g 239 (342)
.|+|+|+.|+|+|+||++.||+||+||++||+.+||+|+.||||+++ +|+||+... . +.+.++
T Consensus 1 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~------------~---g~~~~g 65 (164)
T 1lop_A 1 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPG------------M---KQKATK 65 (164)
T ss_dssp CEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEETT------------T---EECCCC
T ss_pred CEEEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcccC------------C---CcCCCC
Confidence 37899999999999999999999999999999999999999999987 777776631 1 123455
Q ss_pred CccCCCCCCCC--CCCCCcEEEEeCC------CCcEEEEcCCCCCCCCC--------ceEEEEEEcccHHHHHHHhcCCC
Q 019343 240 TAFKKIPREVC--PSIRRGSVAWIGS------GPEFFISLSNHEEWKNS--------YTVFGSVLPQNMEIVEKIAQLPT 303 (342)
Q Consensus 240 ~~~~~ip~E~~--~~~~rG~Vsma~s------GsqFFItL~d~p~Ldg~--------~TVFG~Vv~eGmdVldkI~~~~t 303 (342)
..+++ |.. .++.+|+||||++ ||||||++++.++||++ |||||+|+ +||+||++|+++++
T Consensus 66 ~~~~d---E~~~~l~~~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv-~G~dvv~~I~~~~t 141 (164)
T 1lop_A 66 EPIKN---EANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVV-DGMDEVDKIKGVAT 141 (164)
T ss_dssp CCBCC---CCCSSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEE-ECHHHHHHHHTSCE
T ss_pred Ccccc---ccccccccCccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEe-cCHHHHHHHHhCCc
Confidence 55544 432 3568999999973 48999999999999997 99999999 99999999999999
Q ss_pred CCCCcCccccccccCCeEEEEEec
Q 019343 304 KSDVWNNINVTVLKKPVPLRLRRL 327 (342)
Q Consensus 304 d~~~~~~i~v~v~~~PV~i~~~r~ 327 (342)
++.+ .....|.+||.|..+.+
T Consensus 142 ~~~~---~~~~~P~~~v~I~~~~v 162 (164)
T 1lop_A 142 GRSG---MHQDVPKEDVIIESVTV 162 (164)
T ss_dssp EEET---TEEEEESSCCEEEEEEE
T ss_pred CCcc---ccCCCcCCCeEEEEEEE
Confidence 8531 01237889999987765
No 16
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=9.3e-34 Score=252.37 Aligned_cols=146 Identities=21% Similarity=0.275 Sum_probs=121.0
Q ss_pred CCccEEEEE-----EeceeEEEEECCCCChHHHHHHHHHhhC--CC-cCCceeeEeeeC--CcccCCCCCccCCCCCCCC
Q 019343 158 KGQGIVGLE-----TEYGTLHIKLFPECAPHSVAYILELLSL--RH-CAGCQFHRAESR--GQSWDIEGNHIKNAPYGPP 227 (342)
Q Consensus 158 ~~~~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~~--g~-Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p 227 (342)
..++.|.|+ |+.|+|+|+||++.||++|+||++||+. || |+|+.||||+++ +|+||+...
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~---------- 77 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKG---------- 77 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTS----------
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCC----------
Confidence 345677777 8999999999999999999999999984 78 999999999998 888887631
Q ss_pred ccccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCC
Q 019343 228 FGLIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLP 302 (342)
Q Consensus 228 ~~~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~ 302 (342)
.+.|+.++|+..|+++ ....+|.++|+||||++| |||||++++.++||++|+|||+|+ +||+||++|++++
T Consensus 78 --~G~gg~si~g~~f~dE-~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv-~G~dvv~~I~~~~ 153 (172)
T 2cmt_A 78 --DGTGGKSIYGRKFDDE-NFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVV-DGQNVVKKMESVG 153 (172)
T ss_dssp --SSSCCCBTTBSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHGGGGC
T ss_pred --CCCCCCccCCCccccc-ccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEE-cCHHHHHHHHhCC
Confidence 2345666777777653 223567789999999964 799999999999999999999999 9999999999999
Q ss_pred CCCCCcCccccccccCCeEEEEE
Q 019343 303 TKSDVWNNINVTVLKKPVPLRLR 325 (342)
Q Consensus 303 td~~~~~~i~v~v~~~PV~i~~~ 325 (342)
++. + .|.+||.|..+
T Consensus 154 ~~~-~-------~P~~~v~I~~~ 168 (172)
T 2cmt_A 154 SKS-G-------KVKEPVIISRC 168 (172)
T ss_dssp CTT-C-------CCSSCEEEEEE
T ss_pred CCC-C-------CCCCCEEEEEe
Confidence 854 2 67788888654
No 17
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=2.2e-33 Score=250.16 Aligned_cols=144 Identities=19% Similarity=0.255 Sum_probs=119.7
Q ss_pred ccEEEEE-----EeceeEEEEECCCCChHHHHHHHHHhh--CCC-cCCceeeEeeeC--CcccCCCCCccCCCCCCCCcc
Q 019343 160 QGIVGLE-----TEYGTLHIKLFPECAPHSVAYILELLS--LRH-CAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFG 229 (342)
Q Consensus 160 ~~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~ 229 (342)
++.|.|+ |+.|+|+|+||++.||++|+||++||+ .+| |+|+.||||+++ +|+||+...
T Consensus 11 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~------------ 78 (173)
T 2r99_A 11 NPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNH------------ 78 (173)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTS------------
T ss_pred CCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCC------------
Confidence 4466665 789999999999999999999999995 677 999999999998 888887631
Q ss_pred ccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCC
Q 019343 230 LIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTK 304 (342)
Q Consensus 230 ~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td 304 (342)
.+.|+.+.++..|+++ ....+|.++|+||||++| |||||++.+.++||++|+|||+|+ +||+||++|++++++
T Consensus 79 ~g~gg~si~g~~f~dE-~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv-~G~dvv~~I~~~~~~ 156 (173)
T 2r99_A 79 NGTGGKSIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVT-EGLDVLRQIEAQGSK 156 (173)
T ss_dssp SSSCCCBTTBSCBCCC-CCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTTCCT
T ss_pred CCCCCCccCCCcccCc-ccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEE-cCHHHHHHHHhCCCC
Confidence 2345666777777653 233567789999999964 799999999999999999999999 999999999999886
Q ss_pred CCCcCccccccccCCeEEEEE
Q 019343 305 SDVWNNINVTVLKKPVPLRLR 325 (342)
Q Consensus 305 ~~~~~~i~v~v~~~PV~i~~~ 325 (342)
. + .|.++|.|..+
T Consensus 157 ~-~-------~P~~~v~I~~c 169 (173)
T 2r99_A 157 D-G-------KPKQKVIIADC 169 (173)
T ss_dssp T-C-------CCSSCEEEEEE
T ss_pred C-C-------CCCCCeEEEEe
Confidence 4 2 57788888654
No 18
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=1.2e-33 Score=253.07 Aligned_cols=139 Identities=20% Similarity=0.256 Sum_probs=117.8
Q ss_pred EEeceeEEEEECCCCChHHHHHHHHHhh-----------CCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccc
Q 019343 166 ETEYGTLHIKLFPECAPHSVAYILELLS-----------LRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQ 232 (342)
Q Consensus 166 ~T~~G~I~IeL~~d~AP~tv~nFl~L~~-----------~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iq 232 (342)
.|+.|+|+|+||++.||+||+||++||+ .+||+|+.||||+++ +|+||+... .+.
T Consensus 20 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~------------~g~ 87 (179)
T 2wfi_A 20 NQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEG------------NGR 87 (179)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTS------------SSS
T ss_pred CccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCC------------CCC
Confidence 4789999999999999999999999996 579999999999998 888887521 234
Q ss_pred cccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCCC
Q 019343 233 GTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSDV 307 (342)
Q Consensus 233 Gg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~~ 307 (342)
|+.++|+..|++. ....+|.++|+|||||+| |||||++++.|+||++|+|||+|+ +|||||++|++++++.++
T Consensus 88 gg~si~g~~f~dE-~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv-~G~dvv~~I~~~~t~~~~ 165 (179)
T 2wfi_A 88 GGESIYGGFFEDE-SFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVI-SGQEVVREIENQKTDAAS 165 (179)
T ss_dssp CCCCTTSSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTCCBCTTS
T ss_pred CCCcccCCccccc-ccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEe-CCHHHHHHHHcCCCCCCC
Confidence 5667777777653 223567789999999864 799999999999999999999999 999999999999998776
Q ss_pred cCccccccccCCeEEEEE
Q 019343 308 WNNINVTVLKKPVPLRLR 325 (342)
Q Consensus 308 ~~~i~v~v~~~PV~i~~~ 325 (342)
.|.+||.|..+
T Consensus 166 -------~P~~~v~I~~~ 176 (179)
T 2wfi_A 166 -------KPFAEVRILSC 176 (179)
T ss_dssp -------CBSSCEEEEEE
T ss_pred -------CCCCCeEEEeC
Confidence 66788887643
No 19
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=3.2e-33 Score=249.85 Aligned_cols=145 Identities=26% Similarity=0.262 Sum_probs=120.9
Q ss_pred ccEEEEE-----EeceeEEEEECCCCChHHHHHHHHHhhC--------C---CcCCceeeEeeeC--CcccCCCCCccCC
Q 019343 160 QGIVGLE-----TEYGTLHIKLFPECAPHSVAYILELLSL--------R---HCAGCQFHRAESR--GQSWDIEGNHIKN 221 (342)
Q Consensus 160 ~~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~~--------g---~Ydg~~F~Rv~~~--~q~GD~~g~~i~~ 221 (342)
++.|.|+ |+.|+|+|+||++.||+||+||++||+. + ||+|+.||||+++ +|+||+...
T Consensus 6 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~---- 81 (177)
T 1a58_A 6 RRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKG---- 81 (177)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSS----
T ss_pred CcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCC----
Confidence 4566665 5799999999999999999999999984 4 8999999999998 888887621
Q ss_pred CCCCCCccccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHH
Q 019343 222 APYGPPFGLIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVE 296 (342)
Q Consensus 222 ~q~G~p~~~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVld 296 (342)
.+.|+.++|+..|++. ....+|+++|+||||++| |||||++++.|+||++|+|||+|+ +|||||+
T Consensus 82 --------~g~gg~si~g~~f~dE-~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv-~G~dvv~ 151 (177)
T 1a58_A 82 --------DGTGGESIYGGMFDDE-EFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVV-SGQEVVT 151 (177)
T ss_dssp --------SSSCCCCTTSSCBCCC-CCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHH
T ss_pred --------CCCCCCcccCCcccCc-ccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEE-cCHHHHH
Confidence 2345666777777653 223567799999999864 799999999999999999999999 9999999
Q ss_pred HHhcCCCCCCCcCccccccccCCeEEEEE
Q 019343 297 KIAQLPTKSDVWNNINVTVLKKPVPLRLR 325 (342)
Q Consensus 297 kI~~~~td~~~~~~i~v~v~~~PV~i~~~ 325 (342)
+|++++++.++ .|.+||.|..+
T Consensus 152 ~I~~~~~~~~~-------~P~~~v~I~~~ 173 (177)
T 1a58_A 152 KIEYLKTNSKN-------RPLADVVILNC 173 (177)
T ss_dssp HHHTSCBCTTS-------CBSSCEEEEEE
T ss_pred HHHhCCCCCCC-------cCCCCeEEEEe
Confidence 99999999876 56788887653
No 20
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3.4e-33 Score=251.98 Aligned_cols=139 Identities=24% Similarity=0.280 Sum_probs=118.0
Q ss_pred EeceeEEEEECCCCChHHHHHHHHHhh--CCC-cCCceeeEeeeC--CcccCC-CCCccCCCCCCCCccccccccccCCC
Q 019343 167 TEYGTLHIKLFPECAPHSVAYILELLS--LRH-CAGCQFHRAESR--GQSWDI-EGNHIKNAPYGPPFGLIQGTLEALGT 240 (342)
Q Consensus 167 T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-Ydg~~F~Rv~~~--~q~GD~-~g~~i~~~q~G~p~~~iqGg~~~~g~ 240 (342)
|+.|+|+|+||++.||+||+||++||+ .+| |+|+.||||+++ +|+||+ .+ .+.|+.++|+.
T Consensus 27 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~-------------~g~gg~si~g~ 93 (188)
T 3ich_A 27 EDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRG-------------DGTGGKSIYGE 93 (188)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTS-------------SSSCCCBTTBS
T ss_pred EeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCC-------------CCCCCccccCC
Confidence 789999999999999999999999995 789 999999999988 888873 33 23456667777
Q ss_pred ccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCCCcCcccccc
Q 019343 241 AFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSDVWNNINVTV 315 (342)
Q Consensus 241 ~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~~~~~i~v~v 315 (342)
.|+++ +...+|+++|+||||++| |||||++++.++||++|+|||+|+ +||+||++|++++++.+. .
T Consensus 94 ~f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv-~G~dvv~~I~~~~~~~~~-------~ 164 (188)
T 3ich_A 94 RFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVL-EGMEVVRKVESTKTDSRD-------K 164 (188)
T ss_dssp CBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSCBCTTS-------C
T ss_pred ccccc-ccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEe-CCHHHHHHHHhCCcCCCC-------e
Confidence 77653 334567789999999864 799999999999999999999999 999999999999998765 6
Q ss_pred ccCCeEEEEEec
Q 019343 316 LKKPVPLRLRRL 327 (342)
Q Consensus 316 ~~~PV~i~~~r~ 327 (342)
|.+||.|..+.+
T Consensus 165 P~~~v~I~~~~~ 176 (188)
T 3ich_A 165 PLKDVIIADCGK 176 (188)
T ss_dssp BSSCEEEEEEEE
T ss_pred ECCCEEEEEeEE
Confidence 678888866543
No 21
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=2.9e-33 Score=248.65 Aligned_cols=144 Identities=20% Similarity=0.277 Sum_probs=120.1
Q ss_pred ccEEEEEEe-----ceeEEEEECCCCChHHHHHHHHHhh-CCC--------cCCceeeEeeeC--CcccCCCCCccCCCC
Q 019343 160 QGIVGLETE-----YGTLHIKLFPECAPHSVAYILELLS-LRH--------CAGCQFHRAESR--GQSWDIEGNHIKNAP 223 (342)
Q Consensus 160 ~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~-~g~--------Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q 223 (342)
++.|.|+++ .|+|+|+||++.||+||+||++||+ .+| |+|+.||||+++ +|+||+...
T Consensus 3 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~------ 76 (170)
T 1qng_A 3 RSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNG------ 76 (170)
T ss_dssp SCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTS------
T ss_pred CCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCC------
Confidence 456777776 8999999999999999999999998 488 999999999998 888887521
Q ss_pred CCCCccccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHH
Q 019343 224 YGPPFGLIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKI 298 (342)
Q Consensus 224 ~G~p~~~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI 298 (342)
.+.|+.++++..|+++ ....+|.++|+||||++| |||||++++.++||++|+|||+|+ +|||||++|
T Consensus 77 ------~g~gg~si~g~~f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv-~G~dvv~~I 148 (170)
T 1qng_A 77 ------NGSGGESIYGRSFTDE-NFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVI-EGMNVVREM 148 (170)
T ss_dssp ------SSSCCCBTTBSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHH
T ss_pred ------CCCCCccccCCccccc-ccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEE-CCHHHHHHH
Confidence 2345666777777653 223567789999999854 799999999999999999999999 999999999
Q ss_pred hcCCCCCCCcCccccccccCCeEEEEE
Q 019343 299 AQLPTKSDVWNNINVTVLKKPVPLRLR 325 (342)
Q Consensus 299 ~~~~td~~~~~~i~v~v~~~PV~i~~~ 325 (342)
+++++ .++ .|.+||.|..+
T Consensus 149 ~~~~t-~~~-------~P~~~v~I~~c 167 (170)
T 1qng_A 149 EKEGA-KSG-------YVKRSVVITDC 167 (170)
T ss_dssp HTTCC-TTC-------CCSSCEEEEEE
T ss_pred HhCCC-CCC-------CCCCCeEEEec
Confidence 99999 333 67788888654
No 22
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=4.4e-33 Score=246.40 Aligned_cols=143 Identities=21% Similarity=0.311 Sum_probs=118.1
Q ss_pred cEEEEE-----EeceeEEEEECCCCChHHHHHHHHHhh--CCC-cCCceeeEeeeC--CcccCCCCCccCCCCCCCCccc
Q 019343 161 GIVGLE-----TEYGTLHIKLFPECAPHSVAYILELLS--LRH-CAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGL 230 (342)
Q Consensus 161 ~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~ 230 (342)
+.|.|+ |+.|+|+|+||++.||++|+||++||+ .+| |+|+.||||+++ +|+||+... .
T Consensus 4 ~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~------------~ 71 (165)
T 2z6w_A 4 PLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNH------------N 71 (165)
T ss_dssp CEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTS------------S
T ss_pred CEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCC------------C
Confidence 455555 478999999999999999999999999 999 999999999998 888887531 2
Q ss_pred cccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCC
Q 019343 231 IQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKS 305 (342)
Q Consensus 231 iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~ 305 (342)
+.|+.++++..|+++ ....+|.++|+||||++| |||||++++.++||++|+|||+|+ +||+||++|+++++.
T Consensus 72 g~gg~si~g~~f~dE-~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv-~G~dvv~~I~~~~~~- 148 (165)
T 2z6w_A 72 GTGGKSIYGSRFPDE-NFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVI-EGMDVVKKIESFGSK- 148 (165)
T ss_dssp SSCCCBTTBSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHHTCCT-
T ss_pred CCCCCcccCCcccCc-ccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEE-cCHHHHHHHHhCCCC-
Confidence 345556677777553 233556789999999964 799999999999999999999999 999999999999863
Q ss_pred CCcCccccccccCCeEEEEE
Q 019343 306 DVWNNINVTVLKKPVPLRLR 325 (342)
Q Consensus 306 ~~~~~i~v~v~~~PV~i~~~ 325 (342)
++ .|.+||.|..+
T Consensus 149 ~~-------~P~~~v~I~~~ 161 (165)
T 2z6w_A 149 SG-------RTSKKIVITDC 161 (165)
T ss_dssp TS-------CCSSCEEEEEE
T ss_pred CC-------CCCCcEEEEEe
Confidence 33 67788888654
No 23
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-33 Score=259.90 Aligned_cols=153 Identities=24% Similarity=0.305 Sum_probs=123.3
Q ss_pred eecCCccEEEEEEeceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccc
Q 019343 155 IFGKGQGIVGLETEYGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQ 232 (342)
Q Consensus 155 ~~~~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iq 232 (342)
..++.+..|.|+|++|+|+|+||++.||++|+||++||+.+||+|+.||||+++ +|+||+.+. +.
T Consensus 16 ~~p~~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~-------------G~ 82 (232)
T 3bkp_A 16 FQGSTRGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGT-------------GR 82 (232)
T ss_dssp CCCSCBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSS-------------SS
T ss_pred ccCCCCCEEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCC-------------CC
Confidence 345667899999999999999999999999999999999999999999999988 888877653 34
Q ss_pred cccccC--CCccCCCCCCCCCCCCCcEEEEeCCC-------------------CcEEEEcCCCCCCCCCceEEEEEEccc
Q 019343 233 GTLEAL--GTAFKKIPREVCPSIRRGSVAWIGSG-------------------PEFFISLSNHEEWKNSYTVFGSVLPQN 291 (342)
Q Consensus 233 Gg~~~~--g~~~~~ip~E~~~~~~rG~Vsma~sG-------------------sqFFItL~d~p~Ldg~~TVFG~Vv~eG 291 (342)
|+.+++ +..|+++.....+++++|+||||++| |||||++++.++||++|||||+|++.+
T Consensus 83 Gg~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vvg~~ 162 (232)
T 3bkp_A 83 GGADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVTGHT 162 (232)
T ss_dssp CCCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEECGGG
T ss_pred CCCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEEeCc
Confidence 555566 66665432223456789999999753 599999999999999999999999324
Q ss_pred HHHHHHHhcCCCCCCCcCccccccccCCeEEEEEec
Q 019343 292 MEIVEKIAQLPTKSDVWNNINVTVLKKPVPLRLRRL 327 (342)
Q Consensus 292 mdVldkI~~~~td~~~~~~i~v~v~~~PV~i~~~r~ 327 (342)
+++|++|++++++.++ .|.+||.|..+.+
T Consensus 163 v~~v~kI~~~~t~~~~-------~P~~~i~I~~~~v 191 (232)
T 3bkp_A 163 LYNLMKFNDLEVGKED-------RPMTPPFIKSVDV 191 (232)
T ss_dssp HHHHHHHTTSCBCGGG-------CBSSCCBEEEEEE
T ss_pred hHHHHHHHcCCcCCCC-------CcCCCeEEEEEEE
Confidence 5569999999998766 5556666655443
No 24
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=4.5e-33 Score=248.08 Aligned_cols=144 Identities=19% Similarity=0.248 Sum_probs=119.6
Q ss_pred ccEEEEEEe-----ceeEEEEECCCCChHHHHHHHHHhhC--C--------CcCCceeeEeeeC--CcccCCCCCccCCC
Q 019343 160 QGIVGLETE-----YGTLHIKLFPECAPHSVAYILELLSL--R--------HCAGCQFHRAESR--GQSWDIEGNHIKNA 222 (342)
Q Consensus 160 ~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~~--g--------~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~ 222 (342)
++.|.|+++ .|+|+|+||++.||+||+||++||+. + ||+|+.||||+++ +|+||+...
T Consensus 3 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~----- 77 (173)
T 2igv_A 3 RSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRG----- 77 (173)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTS-----
T ss_pred CCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCC-----
Confidence 346777665 89999999999999999999999986 5 7999999999998 888887631
Q ss_pred CCCCCccccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHH
Q 019343 223 PYGPPFGLIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEK 297 (342)
Q Consensus 223 q~G~p~~~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldk 297 (342)
.+.|+.++|+..|+++ ....+|.++|+||||++| |||||++++.|+||++|+|||+|+ +||+||++
T Consensus 78 -------~G~gg~siyg~~f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv-~G~dvv~~ 148 (173)
T 2igv_A 78 -------NGTGGESIYGEKFPDE-NFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVV-EGLDVVKA 148 (173)
T ss_dssp -------SSSCCCBTTBSCBCCC-CCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHH
T ss_pred -------CCCCCCccCCCcccCc-ccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEe-cCHHHHHH
Confidence 2345666777777653 224567789999999964 799999999999999999999999 99999999
Q ss_pred HhcCCCCCCCcCccccccccCCeEEEEE
Q 019343 298 IAQLPTKSDVWNNINVTVLKKPVPLRLR 325 (342)
Q Consensus 298 I~~~~td~~~~~~i~v~v~~~PV~i~~~ 325 (342)
|++++++. + .|.+||.|..+
T Consensus 149 I~~~~t~~-~-------~P~~~v~I~~~ 168 (173)
T 2igv_A 149 VESNGSQS-G-------KPVKDCMIADC 168 (173)
T ss_dssp HHTTCCTT-S-------CCSSCEEEEEE
T ss_pred HHhCCCCC-C-------CCCCCEEEEEe
Confidence 99999854 3 67788888654
No 25
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=4.7e-33 Score=247.86 Aligned_cols=138 Identities=24% Similarity=0.284 Sum_probs=116.2
Q ss_pred EEeceeEEEEECCCCChHHHHHHHHHh--hCCC-cCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccccccccCCC
Q 019343 166 ETEYGTLHIKLFPECAPHSVAYILELL--SLRH-CAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGTLEALGT 240 (342)
Q Consensus 166 ~T~~G~I~IeL~~d~AP~tv~nFl~L~--~~g~-Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg~~~~g~ 240 (342)
.|+.|+|+|+||++.||++|+||++|| +.+| |+|+.||||+++ +|+||+.. ..+.|+.++++.
T Consensus 22 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~------------~~g~gg~si~g~ 89 (172)
T 2haq_A 22 SEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTN------------FDGTGGKSIYGE 89 (172)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTT------------SSSSCCCCSSSS
T ss_pred CEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccC------------CCCCCCccccCC
Confidence 588999999999999999999999999 7899 999999999988 88888432 123456667777
Q ss_pred ccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCCCcCcccccc
Q 019343 241 AFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSDVWNNINVTV 315 (342)
Q Consensus 241 ~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~~~~~i~v~v 315 (342)
.|+++ +...++. +|+||||++| |||||++++.++||++|+|||+|+ +||+||++|++++++++. .
T Consensus 90 ~f~dE-~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv-~G~dvv~~I~~~~t~~~~-------~ 159 (172)
T 2haq_A 90 KFADE-NLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVL-DGMDVVLRIEKTKTNSHD-------R 159 (172)
T ss_dssp CBCCC-CCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSCBCGGG-------C
T ss_pred cccCc-CCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEe-CCHHHHHHHHhCCcCCCC-------c
Confidence 77653 2234455 9999999964 799999999999999999999999 999999999999998765 6
Q ss_pred ccCCeEEEEE
Q 019343 316 LKKPVPLRLR 325 (342)
Q Consensus 316 ~~~PV~i~~~ 325 (342)
|.+||.|..+
T Consensus 160 P~~~v~I~~~ 169 (172)
T 2haq_A 160 PVKPVKIVAS 169 (172)
T ss_dssp BSSCEEEEEE
T ss_pred CCCCeEEEEe
Confidence 7788888654
No 26
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=5.9e-33 Score=245.24 Aligned_cols=137 Identities=20% Similarity=0.266 Sum_probs=117.0
Q ss_pred EeceeEEEEECCCCChHHHHHHHHHhh--CCC-cCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccccccccCCCc
Q 019343 167 TEYGTLHIKLFPECAPHSVAYILELLS--LRH-CAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQGTLEALGTA 241 (342)
Q Consensus 167 T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iqGg~~~~g~~ 241 (342)
|+.|+|+||||++.||+||+||++||+ .+| |+|+.||||+++ +|+||+.. ..+.|+.+.++..
T Consensus 14 t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~------------~~g~gg~si~g~~ 81 (164)
T 3pmp_A 14 KPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTR------------HNGTGGKSIYGEK 81 (164)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTT------------SSSSCCCBTTBSC
T ss_pred EEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCC------------CCCCCCcccCCcc
Confidence 899999999999999999999999999 888 999999999988 88888432 1235666777877
Q ss_pred cCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCCCcCccccccc
Q 019343 242 FKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSDVWNNINVTVL 316 (342)
Q Consensus 242 ~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~~~~~i~v~v~ 316 (342)
++++ +...+|.++|+||||++| |||||++++.++||++|+|||+|+ +||+||++|++++++. + .|
T Consensus 82 ~~dE-~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv-~G~~vv~~I~~~~~~~-~-------~P 151 (164)
T 3pmp_A 82 FADE-NFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVI-EGLDIVRKVEGKGSAS-G-------KT 151 (164)
T ss_dssp BCCC-CCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTTCCTT-C-------CC
T ss_pred cccc-ccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEe-CCHHHHHHHHhCCCCC-C-------Cc
Confidence 7663 444667889999999854 799999999999999999999999 9999999999999873 3 57
Q ss_pred cCCeEEEEE
Q 019343 317 KKPVPLRLR 325 (342)
Q Consensus 317 ~~PV~i~~~ 325 (342)
.+||.|...
T Consensus 152 ~~~v~I~~c 160 (164)
T 3pmp_A 152 NATIKITDC 160 (164)
T ss_dssp SSCEEEEEE
T ss_pred ccCEEEEeC
Confidence 788888654
No 27
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.3e-33 Score=250.57 Aligned_cols=140 Identities=23% Similarity=0.266 Sum_probs=118.7
Q ss_pred EEeceeEEEEECCCCChHHHHHHHHHhh-----------CCCcCCceeeEeeeC--CcccCCCCCccCCCCCCCCccccc
Q 019343 166 ETEYGTLHIKLFPECAPHSVAYILELLS-----------LRHCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPFGLIQ 232 (342)
Q Consensus 166 ~T~~G~I~IeL~~d~AP~tv~nFl~L~~-----------~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~~~iq 232 (342)
.|+.|+|+||||++.||+||+||++||+ .+||+|+.||||+++ +|+||+... .+.
T Consensus 30 ~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~------------~G~ 97 (192)
T 2he9_A 30 REPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEG------------NGK 97 (192)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTS------------SSS
T ss_pred CEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCC------------CCC
Confidence 4789999999999999999999999995 579999999999998 888887521 234
Q ss_pred cccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCCC
Q 019343 233 GTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSDV 307 (342)
Q Consensus 233 Gg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~~ 307 (342)
|+.++|+..|+++ ....+|.++|+||||++| |||||++++.|+||++|+|||+|+ +|||||++|++++++.++
T Consensus 98 gg~siyg~~f~dE-~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I~~~~t~~~~ 175 (192)
T 2he9_A 98 GGESIYGGYFKDE-NFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVI-SGFEVIEQIENLKTDAAS 175 (192)
T ss_dssp CCCCTTSSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSCBCTTS
T ss_pred CCCcccCCcccCc-cccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEE-eCHHHHHHHHcCCcCCCC
Confidence 5667777777653 223567789999999864 799999999999999999999999 999999999999998876
Q ss_pred cCccccccccCCeEEEEEe
Q 019343 308 WNNINVTVLKKPVPLRLRR 326 (342)
Q Consensus 308 ~~~i~v~v~~~PV~i~~~r 326 (342)
.|.+||.|..+-
T Consensus 176 -------~P~~~v~I~~~g 187 (192)
T 2he9_A 176 -------RPYADVRVIDCG 187 (192)
T ss_dssp -------CBSSCEEEEEEE
T ss_pred -------CCcCCeEEEEeE
Confidence 667888886554
No 28
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=9.4e-33 Score=248.37 Aligned_cols=147 Identities=24% Similarity=0.245 Sum_probs=122.4
Q ss_pred CCccEEEEEEe-----ceeEEEEECCCCChHHHHHHHHHhhC--C-CcCCceeeEeeeC--CcccCCCCCccCCCCCCCC
Q 019343 158 KGQGIVGLETE-----YGTLHIKLFPECAPHSVAYILELLSL--R-HCAGCQFHRAESR--GQSWDIEGNHIKNAPYGPP 227 (342)
Q Consensus 158 ~~~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~~--g-~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p 227 (342)
.-+..|.|+++ .|+|+|+||++.||++|+||++||+. | ||+|+.||||+++ +|+||+...
T Consensus 10 ~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~---------- 79 (185)
T 4fru_A 10 KVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRG---------- 79 (185)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTS----------
T ss_pred CcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCC----------
Confidence 34567777765 99999999999999999999999976 5 7999999999998 888887631
Q ss_pred ccccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCC
Q 019343 228 FGLIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLP 302 (342)
Q Consensus 228 ~~~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~ 302 (342)
.+.|+.+.++..|++. ....+|.++|+||||++| |||||++++.++||++|+|||+|+ +||+||++|++++
T Consensus 80 --~g~gg~si~g~~f~de-~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv-~G~dvv~~I~~~~ 155 (185)
T 4fru_A 80 --DGTGGKSIYGERFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVL-EGMEVVRKVETTK 155 (185)
T ss_dssp --SSSCCCBTTBSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSC
T ss_pred --CCCCCccccCCccCcc-ccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEe-CCHHHHHHHHhCC
Confidence 2345667777777653 334567789999999954 799999999999999999999999 9999999999999
Q ss_pred CCCCCcCccccccccCCeEEEEE
Q 019343 303 TKSDVWNNINVTVLKKPVPLRLR 325 (342)
Q Consensus 303 td~~~~~~i~v~v~~~PV~i~~~ 325 (342)
++.++ .|.++|.|..+
T Consensus 156 t~~~~-------~P~~~v~I~~~ 171 (185)
T 4fru_A 156 TDGRD-------KPLKDVTIADC 171 (185)
T ss_dssp BCTTS-------CBSSCEEEEEE
T ss_pred CCCCC-------cCCCCEEEEEc
Confidence 99876 56677777653
No 29
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=1.2e-32 Score=247.91 Aligned_cols=146 Identities=22% Similarity=0.278 Sum_probs=120.1
Q ss_pred CCccEEEEEEe-----ceeEEEEECCCCChHHHHHHHHHhh--CCC--------cCCceeeEeeeC--CcccCCCCCccC
Q 019343 158 KGQGIVGLETE-----YGTLHIKLFPECAPHSVAYILELLS--LRH--------CAGCQFHRAESR--GQSWDIEGNHIK 220 (342)
Q Consensus 158 ~~~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~--~g~--------Ydg~~F~Rv~~~--~q~GD~~g~~i~ 220 (342)
..++.|.|+++ .|+|+|+||++.||++|+||++||+ .+| |+|+.||||+++ +|+||+...
T Consensus 17 ~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~--- 93 (186)
T 2poy_A 17 QGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRG--- 93 (186)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTS---
T ss_pred CCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCC---
Confidence 45567888765 9999999999999999999999996 578 999999999998 888887531
Q ss_pred CCCCCCCccccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHH
Q 019343 221 NAPYGPPFGLIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIV 295 (342)
Q Consensus 221 ~~q~G~p~~~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVl 295 (342)
.+.|+.++++..|+++ ....+|.++|+||||++| |||||++++.++||++|+|||+|+ +|||||
T Consensus 94 ---------~G~gg~si~g~~f~dE-~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv 162 (186)
T 2poy_A 94 ---------DGTGGESIYGSKFRDE-NFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVL-EGMEVV 162 (186)
T ss_dssp ---------SSSCCCCTTC-CBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHH
T ss_pred ---------CCCCCCccCCCcccCc-ccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEe-cCHHHH
Confidence 2345666777777653 223567789999999864 799999999999999999999999 999999
Q ss_pred HHHhcCCCCCCCcCccccccccCCeEEEEE
Q 019343 296 EKIAQLPTKSDVWNNINVTVLKKPVPLRLR 325 (342)
Q Consensus 296 dkI~~~~td~~~~~~i~v~v~~~PV~i~~~ 325 (342)
++|++++++. + .|.+||+|..+
T Consensus 163 ~~I~~~~t~~-~-------~P~~~v~I~~c 184 (186)
T 2poy_A 163 KSIEKCGSQN-G-------KPTKSVCITAS 184 (186)
T ss_dssp HHHHHTCCTT-S-------CCSSCEEEEEE
T ss_pred HHHHhCCCCC-C-------CCCCCEEEEeC
Confidence 9999999843 3 67788888653
No 30
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=247.03 Aligned_cols=145 Identities=21% Similarity=0.286 Sum_probs=120.6
Q ss_pred CccEEEEEEe-----ceeEEEEECCCCChHHHHHHHHHhhCCC---cCCceeeEeeeC--CcccCCCCCccCCCCCCCCc
Q 019343 159 GQGIVGLETE-----YGTLHIKLFPECAPHSVAYILELLSLRH---CAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPF 228 (342)
Q Consensus 159 ~~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~~g~---Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~ 228 (342)
.++.|.|+|+ .|+|+|+||++.||++|+||++||+.++ |+|+.||||+++ +|+||+...
T Consensus 21 ~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~----------- 89 (184)
T 3rdd_A 21 VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRH----------- 89 (184)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTS-----------
T ss_pred CCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCC-----------
Confidence 4578889877 9999999999999999999999997655 999999999998 888885431
Q ss_pred cccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCC
Q 019343 229 GLIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPT 303 (342)
Q Consensus 229 ~~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~t 303 (342)
.+.|+.+.++..+++ ++...++.++|+||||++| |||||++++.++||++|+|||+|+ +|||||++|+++++
T Consensus 90 -~g~gg~si~g~~~~d-e~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv-~G~dvv~~I~~~~~ 166 (184)
T 3rdd_A 90 -NGTGGKSIYGEKFED-ENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVK-EGMNIVEAMERFGS 166 (184)
T ss_dssp -SSSCCCBTTBSCBCC-CCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTTCC
T ss_pred -CCCCCcccCCCcccC-cccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEe-cCHHHHHHHHhcCC
Confidence 234555677777755 2334567789999999864 799999999999999999999999 99999999999987
Q ss_pred CCCCcCccccccccCCeEEEEE
Q 019343 304 KSDVWNNINVTVLKKPVPLRLR 325 (342)
Q Consensus 304 d~~~~~~i~v~v~~~PV~i~~~ 325 (342)
+. + .|.++|+|..+
T Consensus 167 ~~-g-------~P~~~v~I~~c 180 (184)
T 3rdd_A 167 RN-G-------KTSKKITIADC 180 (184)
T ss_dssp TT-S-------CCSSCEEEEEE
T ss_pred CC-C-------CCcCCeEEEeC
Confidence 53 3 56788888654
No 31
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.3e-32 Score=254.83 Aligned_cols=161 Identities=17% Similarity=0.236 Sum_probs=128.6
Q ss_pred CCcccccccce-ecCCccEEEEEEe-----ceeEEEEECCCCChHHHHHHHHHhhCC--------CcCCceeeEeeeC--
Q 019343 145 GQKVMWTSGLI-FGKGQGIVGLETE-----YGTLHIKLFPECAPHSVAYILELLSLR--------HCAGCQFHRAESR-- 208 (342)
Q Consensus 145 ~~~v~wtSG~~-~~~~~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~~g--------~Ydg~~F~Rv~~~-- 208 (342)
...+.|.-... ....++.|.|+++ .|+|+||||++.||+||+||++||+.+ ||+|+.||||+++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~Fm 122 (229)
T 1z81_A 43 NTIIPYYLSNLLTNPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFM 122 (229)
T ss_dssp -CCSCCCGGGGSSSTTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTE
T ss_pred cccccccccccccCCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCE
Confidence 33455532222 2334678888865 899999999999999999999999987 7999999999998
Q ss_pred CcccCCCCCccCCCCCCCCccccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceE
Q 019343 209 GQSWDIEGNHIKNAPYGPPFGLIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTV 283 (342)
Q Consensus 209 ~q~GD~~g~~i~~~q~G~p~~~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TV 283 (342)
+|+||+.. ..+.|+.++++..|+++ ....+|.++|+||||++| |||||++.+.++||++|+|
T Consensus 123 iQgGD~~~------------g~G~Gg~siyg~~f~dE-~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tV 189 (229)
T 1z81_A 123 IQGGDFIN------------HNGSGSLSIYGEKFDDE-NFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVV 189 (229)
T ss_dssp EEECCTTT------------SSSCCCCBTTBSCCCCC-CCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCE
T ss_pred EEcCCCcC------------CCCCCCCccCCCccccc-ccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeE
Confidence 88888752 12345666777777653 223567789999999954 7999999999999999999
Q ss_pred EEEEEc-ccHHHHHHHhcCCCCCC-CcCccccccccCCeEEEEE
Q 019343 284 FGSVLP-QNMEIVEKIAQLPTKSD-VWNNINVTVLKKPVPLRLR 325 (342)
Q Consensus 284 FG~Vv~-eGmdVldkI~~~~td~~-~~~~i~v~v~~~PV~i~~~ 325 (342)
||+|++ +||+||++|++++++++ + .|.+||+|..+
T Consensus 190 FG~Vv~~eGmdVv~~I~~~~t~~~~~-------~P~~~V~I~~c 226 (229)
T 1z81_A 190 FGRIIDNDSLLLLKKIENVSVTPYIY-------KPKIPINVVEC 226 (229)
T ss_dssp EEEECSHHHHHHHHHHHHSCBCTTTC-------CBSSCEEEEEE
T ss_pred EEEEEecCcHHHHHHHHhCCCCCCCC-------CCCCCeEEEeC
Confidence 999996 79999999999999875 4 67788888654
No 32
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=3.3e-32 Score=246.45 Aligned_cols=146 Identities=23% Similarity=0.326 Sum_probs=121.0
Q ss_pred CccEEEEE-----EeceeEEEEECCCCChHHHHHHHHHhh--CCC-cCCceeeEeeeC--CcccCCCCCccCCCCCCCCc
Q 019343 159 GQGIVGLE-----TEYGTLHIKLFPECAPHSVAYILELLS--LRH-CAGCQFHRAESR--GQSWDIEGNHIKNAPYGPPF 228 (342)
Q Consensus 159 ~~~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-Ydg~~F~Rv~~~--~q~GD~~g~~i~~~q~G~p~ 228 (342)
.++.|.|+ |+.|+|+|+||++.||++|+||++||+ .+| |+|+.||||+++ +|+||+...
T Consensus 26 ~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~----------- 94 (193)
T 3k2c_A 26 ASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAH----------- 94 (193)
T ss_dssp CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTS-----------
T ss_pred CCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCC-----------
Confidence 44567666 789999999999999999999999998 677 999999999988 888885431
Q ss_pred cccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCC
Q 019343 229 GLIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPT 303 (342)
Q Consensus 229 ~~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~t 303 (342)
.+.|+.++++..|++. +...++.++|+|+||++| |||||++++.++||++|+|||+|+ +|||||++|+++++
T Consensus 95 -~g~gg~si~g~~f~dE-~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I~~~~t 171 (193)
T 3k2c_A 95 -NGTGGRSIYGEKFPDE-NFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVV-EGMDVVHKIAKYGS 171 (193)
T ss_dssp -SSSCCCCTTSSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTTCC
T ss_pred -CCcCCcccCCCccccc-ccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEe-CCHHHHHHHHhcCC
Confidence 2355667777777663 334567799999999854 799999999999999999999999 99999999999999
Q ss_pred CCCCcCcccccccc--CCeEEEEEe
Q 019343 304 KSDVWNNINVTVLK--KPVPLRLRR 326 (342)
Q Consensus 304 d~~~~~~i~v~v~~--~PV~i~~~r 326 (342)
++. .|. ++|+|...-
T Consensus 172 ~~g--------~P~~~~~v~I~~cG 188 (193)
T 3k2c_A 172 ESG--------QVKKGYRIEIRDCG 188 (193)
T ss_dssp TTC--------CCCTTCCEEEEEEE
T ss_pred CCC--------cCccCccEEEEEce
Confidence 843 445 788886653
No 33
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=99.98 E-value=6.6e-33 Score=246.86 Aligned_cols=140 Identities=21% Similarity=0.257 Sum_probs=102.1
Q ss_pred EEEeceeEEEEECCCCChHHHHHHHHHhh--CCC-cCCceeeEeeeC--CcccC-CCCCccCCCCCCCCccccccccccC
Q 019343 165 LETEYGTLHIKLFPECAPHSVAYILELLS--LRH-CAGCQFHRAESR--GQSWD-IEGNHIKNAPYGPPFGLIQGTLEAL 238 (342)
Q Consensus 165 l~T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-Ydg~~F~Rv~~~--~q~GD-~~g~~i~~~q~G~p~~~iqGg~~~~ 238 (342)
++|++|+|+|+||++.||++|+||++||+ .+| |+|+.||||+++ +|+|| +.+ .+.|+.++|
T Consensus 17 ~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~-------------~g~gg~si~ 83 (172)
T 2c3b_A 17 AETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRG-------------NGTGGRSIY 83 (172)
T ss_dssp SCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC--------------------------
T ss_pred eecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCC-------------CCCCCcccC
Confidence 35889999999999999999999999999 778 999999999988 78777 443 335566677
Q ss_pred CCccCCCCCCCCCCCCCcEEEEeCC-----CCcEEEEcCCCCCCCCCceEEEEEEcc--cHHHHHHHhcCCCCCCCcCcc
Q 019343 239 GTAFKKIPREVCPSIRRGSVAWIGS-----GPEFFISLSNHEEWKNSYTVFGSVLPQ--NMEIVEKIAQLPTKSDVWNNI 311 (342)
Q Consensus 239 g~~~~~ip~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~Ldg~~TVFG~Vv~e--GmdVldkI~~~~td~~~~~~i 311 (342)
+..|+++ +....|+++|+||||++ ||||||++++.++||++|+|||+|+ + ||+||++|++++++...
T Consensus 84 g~~f~dE-~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv-~~~G~dvv~~I~~~~t~~~~---- 157 (172)
T 2c3b_A 84 GDKFADE-NFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVA-DEKSYSVVKEIEALGSSSGS---- 157 (172)
T ss_dssp ----------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEEC-SHHHHHHHHHHHTTCCTTSC----
T ss_pred CCcccCc-ccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEE-ecCCHHHHHHHHhCCCCCCC----
Confidence 7777552 22234668999999985 4799999999999999999999999 8 99999999999998642
Q ss_pred ccccccCCeEEEEE
Q 019343 312 NVTVLKKPVPLRLR 325 (342)
Q Consensus 312 ~v~v~~~PV~i~~~ 325 (342)
..|.+||.|..+
T Consensus 158 --~~P~~~v~I~~c 169 (172)
T 2c3b_A 158 --VRSNTRPKIVNC 169 (172)
T ss_dssp --CCSSSCCEEEEE
T ss_pred --ccCCCCeEEEeC
Confidence 156788887653
No 34
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=99.97 E-value=9.1e-32 Score=250.11 Aligned_cols=146 Identities=21% Similarity=0.291 Sum_probs=117.8
Q ss_pred CccEEEEE-----EeceeEEEEECCCCChHHHHHHHHHhhC-----------------C--C-cCCceeeEeeeC--Ccc
Q 019343 159 GQGIVGLE-----TEYGTLHIKLFPECAPHSVAYILELLSL-----------------R--H-CAGCQFHRAESR--GQS 211 (342)
Q Consensus 159 ~~~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~~-----------------g--~-Ydg~~F~Rv~~~--~q~ 211 (342)
.++.|.|+ |+.|+|+|+||++.||+||+||++||+. | | |+|+.||||+++ +|+
T Consensus 13 ~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQg 92 (234)
T 2ose_A 13 KNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVS 92 (234)
T ss_dssp SSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEE
T ss_pred CCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEc
Confidence 34566666 9999999999999999999999999984 4 7 999999999988 888
Q ss_pred cCC-CCCccCCCCCCCCccccccccccCCCc-----cCCCCCCCCCCCCCcEEEEeC----CC-----CcEEEEcCC---
Q 019343 212 WDI-EGNHIKNAPYGPPFGLIQGTLEALGTA-----FKKIPREVCPSIRRGSVAWIG----SG-----PEFFISLSN--- 273 (342)
Q Consensus 212 GD~-~g~~i~~~q~G~p~~~iqGg~~~~g~~-----~~~ip~E~~~~~~rG~Vsma~----sG-----sqFFItL~d--- 273 (342)
||+ .+ .+.|+.++||.. |+ ....+|.++|+||||+ +| |||||++++
T Consensus 93 Gd~~~g-------------~G~Gg~siyg~~~~p~~f~---~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~ 156 (234)
T 2ose_A 93 GDIYNS-------------NGSSAGTVYCDEPIPPVFG---DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRP 156 (234)
T ss_dssp CCCC-----------------CCCCCTTTTCCBCCCCC---SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCT
T ss_pred CCccCC-------------CCCCCccccCCccCccccc---CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccc
Confidence 884 33 234555666655 43 1234566899999999 54 899999999
Q ss_pred ---CCCCCCCceEEEEEEcccHHHHHHHhcCCCCCCCcCccccccccCCeEEEEEecc
Q 019343 274 ---HEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSDVWNNINVTVLKKPVPLRLRRLK 328 (342)
Q Consensus 274 ---~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~~~~~i~v~v~~~PV~i~~~r~~ 328 (342)
.++||++|+|||+|+ +|||||++|++++++.++ .|.++|.|..+.+-
T Consensus 157 ~~g~p~LDg~~tVFG~Vv-~GmdVv~~I~~~~t~~~~-------~P~~~V~I~~~~~l 206 (234)
T 2ose_A 157 SNVLDELDRDQVVIGQVY-GGLDVLDKINSMIKPYAG-------RKYPTFSIGKCGAY 206 (234)
T ss_dssp TSSGGGSCTTSEEEEEEE-ECHHHHHHHHHHTCCCTT-------CCCCCEEEEEEEEC
T ss_pred cCCCcccCCCeeEEEEEe-CCHHHHHHHHhCCcCCCC-------CccCCEEEEEEEEe
Confidence 899999999999999 999999999999998866 56788888665543
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.97 E-value=1.7e-30 Score=252.96 Aligned_cols=147 Identities=20% Similarity=0.281 Sum_probs=124.8
Q ss_pred ccEEEEEEe-----ceeEEEEECCCCChHHHHHHHHHhhC--------C---CcCCceeeEeeeC--CcccCCCCCccCC
Q 019343 160 QGIVGLETE-----YGTLHIKLFPECAPHSVAYILELLSL--------R---HCAGCQFHRAESR--GQSWDIEGNHIKN 221 (342)
Q Consensus 160 ~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~~--------g---~Ydg~~F~Rv~~~--~q~GD~~g~~i~~ 221 (342)
++.|.|+|+ .|+|+|+||++.||+||+||++||+. | ||+|+.||||+++ +|+||+..
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~----- 89 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSN----- 89 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTT-----
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCC-----
Confidence 568889887 89999999999999999999999997 6 7999999999998 88888772
Q ss_pred CCCCCCccccccccccCCCccCCCCCCCCCCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHH
Q 019343 222 APYGPPFGLIQGTLEALGTAFKKIPREVCPSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVE 296 (342)
Q Consensus 222 ~q~G~p~~~iqGg~~~~g~~~~~ip~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVld 296 (342)
+.+.|+.+++|..|++. ....+|+++|+|+||++| |||||++++.|+||++|||||+|+ +||+||+
T Consensus 90 -------~~g~g~~~~~~~~~~~e-~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~-~g~~v~~ 160 (370)
T 1ihg_A 90 -------QNGTGGESIYGEKFEDE-NFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVI-KGMGVAK 160 (370)
T ss_dssp -------SSSSCCCBTTBSCBCCC-CCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHH
T ss_pred -------CCCCCCCCCCCCCcCCC-cCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEe-cCHHHHH
Confidence 12456667788888663 333567799999999964 799999999999999999999999 9999999
Q ss_pred HHhcCCCCCCCcCccccccccCCeEEEEEecc
Q 019343 297 KIAQLPTKSDVWNNINVTVLKKPVPLRLRRLK 328 (342)
Q Consensus 297 kI~~~~td~~~~~~i~v~v~~~PV~i~~~r~~ 328 (342)
+|+.++++. + .|.++|.|..+.+-
T Consensus 161 ~i~~~~~~~-~-------~P~~~v~I~~~g~l 184 (370)
T 1ihg_A 161 ILENVEVKG-E-------KPAKLCVIAECGEL 184 (370)
T ss_dssp HHHTSCEET-T-------EESSCEEEEEEEEE
T ss_pred HHHcCCCCC-C-------ccceeEEEEEEEEe
Confidence 999999876 3 67788888665443
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.95 E-value=1.1e-28 Score=242.08 Aligned_cols=140 Identities=21% Similarity=0.274 Sum_probs=109.2
Q ss_pred CccEEEEEEe--------ceeEEEEECCCCChHHHHHHHHHhhCCCcCCceeeEeeeC--CcccCCCCCccCCC---CCC
Q 019343 159 GQGIVGLETE--------YGTLHIKLFPECAPHSVAYILELLSLRHCAGCQFHRAESR--GQSWDIEGNHIKNA---PYG 225 (342)
Q Consensus 159 ~~~~V~l~T~--------~G~I~IeL~~d~AP~tv~nFl~L~~~g~Ydg~~F~Rv~~~--~q~GD~~g~~i~~~---q~G 225 (342)
+...|.|+|+ .|+|+|+||++.||+||+||++||+.+||+|+.|||| ++ +|+||+.|... ++ ..+
T Consensus 169 gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~G~-G~~~~~~g 246 (369)
T 3rfy_A 169 GRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGPAE-GFIDPSTE 246 (369)
T ss_dssp SEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCCCS-CCCSCCCC
T ss_pred CCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCCCC-CccCcccC
Confidence 5678899987 8999999999999999999999999999999999999 87 99999987421 10 111
Q ss_pred CCcc-----cccc-ccccCCCccCCCC----CCCCCCCCCcEEEEeCC-------CCcEEEEc-------CCCCCCCCCc
Q 019343 226 PPFG-----LIQG-TLEALGTAFKKIP----REVCPSIRRGSVAWIGS-------GPEFFISL-------SNHEEWKNSY 281 (342)
Q Consensus 226 ~p~~-----~iqG-g~~~~g~~~~~ip----~E~~~~~~rG~Vsma~s-------GsqFFItL-------~d~p~Ldg~~ 281 (342)
.++. ...| +.+.|+..|++.. ....+|+++|+|||||+ ||||||++ ++.++||++|
T Consensus 247 ~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgky 326 (369)
T 3rfy_A 247 KTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRY 326 (369)
T ss_dssp CCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCE
T ss_pred cCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCe
Confidence 1110 0111 2355666554421 11356789999999996 48999999 4678999999
Q ss_pred eEEEEEEcccHHHHHHHhcC
Q 019343 282 TVFGSVLPQNMEIVEKIAQL 301 (342)
Q Consensus 282 TVFG~Vv~eGmdVldkI~~~ 301 (342)
||||+|+ +|||||++|++.
T Consensus 327 tVFG~Vv-eGmdVVdkI~~G 345 (369)
T 3rfy_A 327 AVFGYVT-DNEDFLADLKVG 345 (369)
T ss_dssp EEEEEEE-ESTTGGGGCCTT
T ss_pred eEEEEEe-cCHHHHHHHhCC
Confidence 9999999 999999999885
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=93.84 E-value=0.1 Score=45.01 Aligned_cols=103 Identities=16% Similarity=0.228 Sum_probs=66.9
Q ss_pred ccEEEEEEeceeEEEEECCCCChHHHHHHHHHhh----CCCcCCceeeEeeeCCcccCCCCCccCCCCCCCCcccccccc
Q 019343 160 QGIVGLETEYGTLHIKLFPECAPHSVAYILELLS----LRHCAGCQFHRAESRGQSWDIEGNHIKNAPYGPPFGLIQGTL 235 (342)
Q Consensus 160 ~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~----~g~Ydg~~F~Rv~~~~q~GD~~g~~i~~~q~G~p~~~iqGg~ 235 (342)
.+.+.|.-.-..++++|+.+.||+|++.|+++.= ...|-+-.++.+ +. .+
T Consensus 29 ~~~I~i~~~~~~~~a~L~D~~aP~Ta~~f~~~LPl~~~~~~~g~E~y~~l--------------p~-------~l----- 82 (153)
T 2nnz_A 29 EMRLRIRFESAECEVELYEEWAPETVRAIADALPIKSTANRWGDEIYFTT--------------QV-------AV----- 82 (153)
T ss_dssp CCCEEEEETTEEEEECCCTTSCHHHHHHHHHTCSEEEEEEEETTEEEECC--------------SC-------CC-----
T ss_pred CeEEEEEECCEEEEEEEcCCCCHHHHHHHHHhCCcEEEHHhhCCcEEEEC--------------CC-------CC-----
Confidence 4667888788899999999999999999999751 112322222222 00 00
Q ss_pred ccCCCccCCCCCCCCCCCCCcEEEEeCCCCcEEEEcCCCCCCC------CCceEEEEEEcccHHHHHH
Q 019343 236 EALGTAFKKIPREVCPSIRRGSVAWIGSGPEFFISLSNHEEWK------NSYTVFGSVLPQNMEIVEK 297 (342)
Q Consensus 236 ~~~g~~~~~ip~E~~~~~~rG~Vsma~sGsqFFItL~d~p~Ld------g~~TVFG~Vv~eGmdVldk 297 (342)
... .........|.|++-..|..+-|..++.|... ..-.+||+|+ +|++.|.+
T Consensus 83 -----~~~---en~~~~~~~GDI~Yy~pg~~LaIFYg~~p~s~~e~~~as~~~~lG~I~-~gle~L~~ 141 (153)
T 2nnz_A 83 -----EKE---ENSKDVVELGDVAYWIPGKAICLFFGKTPISDDKIRPASAVNVIGRIV-NSMEGLKG 141 (153)
T ss_dssp -----CCS---SCCBCCCCTTEEEEETTTTEEEEESSCCTTCTTSCCCCSSEEEEEECC-SCCCCGGG
T ss_pred -----CCC---CCCcccCCCCeEEEeCCCCEEEEEECCccccccccccccccEEEEEEc-cCHHHHhh
Confidence 000 01122346899999988888999998874221 2357899999 88766543
No 38
>2yil_A Microneme antigen L2; sugar binding protein, apple-domain tandem repeat, PAN_AP, P galactose-binding lectin, cellular adhesion; 1.95A {Sarcocystis muris} PDB: 2yio_A* 2yip_A*
Probab=91.76 E-value=0.11 Score=44.17 Aligned_cols=38 Identities=26% Similarity=0.578 Sum_probs=31.5
Q ss_pred ccccCChHHHHHHHHhhccCCCCCCCCceeEEcCCCCCCcccccceeeccCC
Q 019343 83 DFKFNSSRMCCEACKAMCTGNDGPCLCDTWVFCGNKKSCGSRFGECWLKKQK 134 (342)
Q Consensus 83 ~~~~~s~~~cc~~c~~~~~~~~~~~~cn~Wv~c~~~~~c~~~~~ecWLK~~~ 134 (342)
.-.+.|+++|++.|+++. .|..|.|=.+...| |||..+
T Consensus 25 ~~~v~Sa~~Cq~~C~~~~-------~C~~FTf~~~~k~C-------~LK~~~ 62 (138)
T 2yil_A 25 VVHVASAQDCMKECQALP-------TCSHFTYNKNSKKC-------HLKAGA 62 (138)
T ss_dssp EEECSSHHHHHHHHHHST-------TCCEEEEETTTCEE-------EEECSC
T ss_pred ccCCCCHHHHHHHccCCC-------CCCEEEEECCCCEE-------EeccCc
Confidence 344789999999999984 99999998777655 999764
No 39
>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}
Probab=91.31 E-value=0.21 Score=43.19 Aligned_cols=56 Identities=20% Similarity=0.413 Sum_probs=43.8
Q ss_pred ccccccccccccc-ceecccccccCChHHHHHHHHhhccCCCCCCCCceeEEcCCCCCCcccccceeeccCCCC
Q 019343 64 CCQGIENLEFWGG-AVKWGSDFKFNSSRMCCEACKAMCTGNDGPCLCDTWVFCGNKKSCGSRFGECWLKKQKDV 136 (342)
Q Consensus 64 ~c~~~~~~~~~g~-~v~wg~~~~~~s~~~cc~~c~~~~~~~~~~~~cn~Wv~c~~~~~c~~~~~ecWLK~~~~~ 136 (342)
.|.- ++++|.|. .+. ......++.+|+++|.+.. .|..|.|=.... .||||.....
T Consensus 83 ~C~~-~~vD~~G~~dl~--~~~~~~s~~~Cq~~C~~~~-------~C~~fTy~~~~~-------~C~LK~~~~~ 139 (161)
T 4a5v_A 83 SCFE-QHVSYEGAPDVM--TAMVTSQSADCQAACAADP-------SCEIFTYNEHDQ-------KCTFKGRGFS 139 (161)
T ss_dssp TTCE-ESEEECSSCBSS--CCCBCSCHHHHHHHHHHCT-------TCCEEEEETTTT-------EEEEECTTTT
T ss_pred chhh-CCCcccCchhcc--ccccCCCHHHHHHHcccCC-------CCCEEEeeCCCC-------eeEeCCCCCc
Confidence 4655 89999998 552 2457789999999999974 999999995544 6699988753
No 40
>2yil_A Microneme antigen L2; sugar binding protein, apple-domain tandem repeat, PAN_AP, P galactose-binding lectin, cellular adhesion; 1.95A {Sarcocystis muris} PDB: 2yio_A* 2yip_A*
Probab=91.09 E-value=0.15 Score=43.27 Aligned_cols=55 Identities=22% Similarity=0.320 Sum_probs=43.5
Q ss_pred cccccccccccccceecccccccCChHHHHHHHHhhccCCCCCCCCceeEEcCCCCCCcccccceeeccCCCC
Q 019343 64 CCQGIENLEFWGGAVKWGSDFKFNSSRMCCEACKAMCTGNDGPCLCDTWVFCGNKKSCGSRFGECWLKKQKDV 136 (342)
Q Consensus 64 ~c~~~~~~~~~g~~v~wg~~~~~~s~~~cc~~c~~~~~~~~~~~~cn~Wv~c~~~~~c~~~~~ecWLK~~~~~ 136 (342)
-| -..+.+|-|..++= ..-.+.++.+|.++|.+.. +|..|.|=. +.||||.....
T Consensus 81 ~C-~~~~vdy~G~d~~~-~~~s~~~a~~CQ~~C~~~~-------~C~~fTf~~---------~tC~lk~~da~ 135 (138)
T 2yil_A 81 NC-SDACWMDGNNPLAV-WDYSGQPPALCWAACMGTP-------GCDLYTFQG---------MTCKLYSQTSS 135 (138)
T ss_dssp CC-CSSEETTCCCCSEE-EECTTCCTHHHHHHHHTST-------TCCEEECGG---------GEEEEECCCC-
T ss_pred cH-HhcCCCccCccccc-cccccCCHHHHHHHhCCCC-------CCcEEEEeC---------CeeEEECCccc
Confidence 45 67889999988865 4444578999999999974 999999977 46799987643
No 41
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=90.10 E-value=0.31 Score=50.43 Aligned_cols=63 Identities=22% Similarity=0.318 Sum_probs=47.7
Q ss_pred ccccccccccccceecccccccCChHHHHHHHHhhccCCCCCCCCceeEEcCCCCCCcc-cccceeeccCCCCC
Q 019343 65 CQGIENLEFWGGAVKWGSDFKFNSSRMCCEACKAMCTGNDGPCLCDTWVFCGNKKSCGS-RFGECWLKKQKDVL 137 (342)
Q Consensus 65 c~~~~~~~~~g~~v~wg~~~~~~s~~~cc~~c~~~~~~~~~~~~cn~Wv~c~~~~~c~~-~~~ecWLK~~~~~~ 137 (342)
+.-.+|++|.|..++ .-...++++||..|..+. +|-.|-|=.+...=-+ +..-||||......
T Consensus 22 ~~~~~~~d~~G~d~~---~v~~~~~~~C~~~C~~~~-------~C~~ft~~~~~~~~~~~~~~~C~LK~~~~~~ 85 (625)
T 2f83_A 22 TQLLKDTCFEGGDIT---TVFTPSAKYCQVVCTYHP-------RCLLFTFTAESPSEDPTRWFTCVLKDSVTET 85 (625)
T ss_dssp CSCEEEEEECSCEEE---EEECSSHHHHHHHHHHSS-------SCCEEEEECCCTTSCSTTTTEEEEECCGGGC
T ss_pred hhhcccccccCCcee---EEecCCHHHHHHhccCCC-------CeeEEEEeCCCCCccccccceEEecccccCC
Confidence 445589999999998 344678999999999984 9999999987764222 22457999877543
No 42
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=90.09 E-value=0.39 Score=49.67 Aligned_cols=66 Identities=17% Similarity=0.253 Sum_probs=49.4
Q ss_pred ccc--ccccccccccceecccccccCChHHHHHHHHhhccCCCCCCCCceeEEcCCCCCCcccccceeeccCCCCCCC
Q 019343 64 CCQ--GIENLEFWGGAVKWGSDFKFNSSRMCCEACKAMCTGNDGPCLCDTWVFCGNKKSCGSRFGECWLKKQKDVLAP 139 (342)
Q Consensus 64 ~c~--~~~~~~~~g~~v~wg~~~~~~s~~~cc~~c~~~~~~~~~~~~cn~Wv~c~~~~~c~~~~~ecWLK~~~~~~~P 139 (342)
-|. ...|++|.|..++= ....++++||..|.+.. .|-.|-|=.....--..-..||||.......|
T Consensus 109 ~C~~~~~~~~d~~G~d~~~---~~~~s~~~C~~~C~~~~-------~C~~fTy~~~~~~~~~~~~~C~LK~s~~~~~~ 176 (625)
T 2f83_A 109 ACNKDIYVDLDMKGINYNS---SVAKSAQECQERCTDDV-------HCHFFTYATRQFPSLEHRNICLLKHTQTGTPT 176 (625)
T ss_dssp CCCCCCEEEEEEECEEEEE---EECSCHHHHHHHHHTSS-------SCSEEEEECSSCSCSSSTTEEEEEECSSSSCS
T ss_pred cCchhhccccceecceeee---EeeCCHHHHHHhccCCC-------CCcEEEecCCcccCCCCCceeEeccCcCCCCc
Confidence 574 34799999988773 67889999999999974 99999997755442233457899997654433
No 43
>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}
Probab=89.91 E-value=0.29 Score=42.26 Aligned_cols=56 Identities=23% Similarity=0.418 Sum_probs=40.7
Q ss_pred cccccccccccccceecccccccCChHHHHHHHHhhccCCCCCCCCceeEEcCCCCCCcccccceeeccCCC
Q 019343 64 CCQGIENLEFWGGAVKWGSDFKFNSSRMCCEACKAMCTGNDGPCLCDTWVFCGNKKSCGSRFGECWLKKQKD 135 (342)
Q Consensus 64 ~c~~~~~~~~~g~~v~wg~~~~~~s~~~cc~~c~~~~~~~~~~~~cn~Wv~c~~~~~c~~~~~ecWLK~~~~ 135 (342)
.|--..|.-+=|..| +......|+.+||..|..+. .|..|.|=.... .||||..+.
T Consensus 10 ~c~~~~n~~~~g~~i--~~~~~~~s~~~Cq~~C~~~p-------~C~~fTf~~~~~-------~C~LK~s~~ 65 (161)
T 4a5v_A 10 SCVHSDNKGSRAPTI--GEPVPDVSLEQCAAQCKAVD-------GCTHFTYNDDSK-------MCHVKEGKP 65 (161)
T ss_dssp SSCCCSSEEECSCBC--SCCBTTCCHHHHHHHHHHST-------TCSEEEEETTTC-------CEEEECSSC
T ss_pred eEEcCCCccccCCCe--eeeecCCCHHHHHHHCcCCC-------CCcEEEEECCCC-------EEEEeCCCC
Confidence 444444555555444 24468899999999999984 999999986655 559998763
No 44
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=89.16 E-value=1.5 Score=38.80 Aligned_cols=45 Identities=16% Similarity=0.194 Sum_probs=30.3
Q ss_pred cEEEEEEece--eEEEEECCCCChHHHHHHHHHhh--CC----CcCCceeeEe
Q 019343 161 GIVGLETEYG--TLHIKLFPECAPHSVAYILELLS--LR----HCAGCQFHRA 205 (342)
Q Consensus 161 ~~V~l~T~~G--~I~IeL~~d~AP~tv~nFl~L~~--~g----~Ydg~~F~Rv 205 (342)
..+.++-..+ .++.+|..+.||+||+.|+++.= .. -|.|..+|-.
T Consensus 22 r~i~itl~~~g~~~~A~Lldd~APkTcaA~~~~LP~~~~viHarwSGeeVy~~ 74 (188)
T 3kop_A 22 RYINITLEKRGVTCKALLLDDVAPRTSKAVWDALPQSSQVFHGKYARNEIYNL 74 (188)
T ss_dssp CEEEEEETTTTEEEEEEECTTTSHHHHHHHHHHCCEEEECEECSSSSSEEEEE
T ss_pred eEEEEEEecCCeEEEEEEccccChHHHHHHHHhCCCCcceEEEEEecceEEEE
Confidence 4455554443 37889999999999999999752 11 2555555554
No 45
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=83.43 E-value=3.7 Score=34.55 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=64.1
Q ss_pred ccEEEEEEeceeEEEEECCCCChHHHHHHHHHh----hCCCcCCceeeEeeeCCcccCCCCCccCCCCCCCCcccccccc
Q 019343 160 QGIVGLETEYGTLHIKLFPECAPHSVAYILELL----SLRHCAGCQFHRAESRGQSWDIEGNHIKNAPYGPPFGLIQGTL 235 (342)
Q Consensus 160 ~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~----~~g~Ydg~~F~Rv~~~~q~GD~~g~~i~~~q~G~p~~~iqGg~ 235 (342)
.+.|.+-.....++.+|+.+ |.|++.|+++. +...|. ..+|--.+ . .+ ..
T Consensus 12 ~~~~~~~~~~~~v~a~L~Dn--p~Ta~~~~~~LPl~~~~~~~g-~E~y~~~p-------------~-------~l-~~-- 65 (136)
T 1zx8_A 12 HMRVELLFESGKCVIDLNEE--YEVVKLLKEKIPFESVVNTWG-EEIYFSTP-------------V-------NV-QK-- 65 (136)
T ss_dssp EEEEEEECSSCEEEEEEETT--SHHHHHHHHHCSEEEECEESS-SEEEEECS-------------C-------CC-CC--
T ss_pred eeEEEEeeCCcEEEEEEcCC--HHHHHHHHHHCCcEEEHHHhC-CcEEEECC-------------c-------cC-CC--
Confidence 45677777778899999644 88999999975 223453 33333211 0 00 00
Q ss_pred ccCCCccCCCCCCCCCCCCCcEEEEeCCCCcEEEEcCCCCCCC------CCceEEEEEEcccHHHHHH
Q 019343 236 EALGTAFKKIPREVCPSIRRGSVAWIGSGPEFFISLSNHEEWK------NSYTVFGSVLPQNMEIVEK 297 (342)
Q Consensus 236 ~~~g~~~~~ip~E~~~~~~rG~Vsma~sGsqFFItL~d~p~Ld------g~~TVFG~Vv~eGmdVldk 297 (342)
. + ........|.|+.-..|..|-|..++.|... ..-.+||+|. +|++.+.+
T Consensus 66 --~-------e-~~~~~~~~GDIaYw~pgg~LaIFyg~~p~s~~e~~~a~~v~~lGrI~-~~l~~l~~ 122 (136)
T 1zx8_A 66 --M-------E-NPREVVEIGDVGYWPPGKALCLFFGKTPMSDDKIQPASAVNVIGKIV-EGLEDLKK 122 (136)
T ss_dssp --C-------S-SEESSBCTTEEEEEGGGTEEEEESSCCTTCSSSBCCSSCEEEEEEEE-ECGGGGGG
T ss_pred --C-------C-CCCccCCCCcEEEeCCCCEEEEEeCCCccccCccccCcCcEEEEEEc-cCHHHHhh
Confidence 0 0 0112236899999998999999998875322 2468999999 88766533
No 46
>3j1r_A Archaeal adhesion filament core; helical polymer, flagellar filament, cell adhesion, structur protein; 7.50A {Ignicoccus hospitalis}
Probab=58.55 E-value=9.5 Score=23.09 Aligned_cols=21 Identities=29% Similarity=0.675 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhh
Q 019343 15 TSLILFFLALISFAVVYTFLS 35 (342)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~ 35 (342)
+.++|++++++...+.|+-||
T Consensus 6 A~~lLIviav~aaVllylW~s 26 (26)
T 3j1r_A 6 ATLLLILIAVAAAVLLYTWVS 26 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 456667777788899998765
No 47
>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*
Probab=37.41 E-value=18 Score=27.83 Aligned_cols=45 Identities=22% Similarity=0.390 Sum_probs=34.8
Q ss_pred cceeccccc-------ccCChHHHHHHHHhhccCCCCCCCCceeEEcCCCCCCcccccceeeccCC
Q 019343 76 GAVKWGSDF-------KFNSSRMCCEACKAMCTGNDGPCLCDTWVFCGNKKSCGSRFGECWLKKQK 134 (342)
Q Consensus 76 ~~v~wg~~~-------~~~s~~~cc~~c~~~~~~~~~~~~cn~Wv~c~~~~~c~~~~~ecWLK~~~ 134 (342)
+.++||+.. +..|..+|.++|.+.. .|.-..|-.....| +||...
T Consensus 12 h~~n~~s~a~~i~~~~~~~sl~~Cq~aC~a~~-------~C~aFTyN~~s~~C-------flKs~~ 63 (82)
T 2ll3_A 12 HTGNIGSKAQTIGEVKRASSLSECRARCQAEK-------ECSHYTYNVKSGLC-------YPKRGK 63 (82)
T ss_dssp SCEEEEECSCBSSSCEECSSHHHHHHHHHHCT-------TEEEEEEETTTTEE-------EEEESS
T ss_pred cccccCCCcccccccccCCCHHHHHHHhhccC-------CCCeEEeccCCCce-------EcccCC
Confidence 345666543 4557789999999974 89999999998866 999753
No 48
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=29.94 E-value=31 Score=33.62 Aligned_cols=48 Identities=13% Similarity=0.147 Sum_probs=40.4
Q ss_pred CCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHh
Q 019343 251 PSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIA 299 (342)
Q Consensus 251 ~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~ 299 (342)
...++|.|.+.|+. -|.-|++.|.| -|++.-|.|+|.++.+.+|+-|.
T Consensus 298 ~~r~rGdItIdN~~ygrY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 350 (372)
T 2p0o_A 298 EARPVGTVTIDNEKYGRYMGEIQVTLVDLP-KDEKVNTITRIIDKDQTILPLIK 350 (372)
T ss_dssp CCBCTTEEEEECGGGGGGTTCEEEESSCBC-CCTTEEEEEEBCGGGGGGGGGCC
T ss_pred CcccCCeEEEeCCCccccccEeeEEcccCC-CCCCeEEEEEECHHHHHHHHhcC
Confidence 34579999999975 59999999965 57788899999988899988775
No 49
>2x5r_A Hypothetical protein ORF126; unknown function, viral protein; 2.00A {Pyrobaculum spherical virus}
Probab=28.07 E-value=65 Score=25.42 Aligned_cols=57 Identities=23% Similarity=0.211 Sum_probs=38.1
Q ss_pred EEeCCCCcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCCCcCcccc-ccccCCeEEEEEeccCC
Q 019343 259 AWIGSGPEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIAQLPTKSDVWNNINV-TVLKKPVPLRLRRLKKS 330 (342)
Q Consensus 259 sma~sGsqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~~~~td~~~~~~i~v-~v~~~PV~i~~~r~~~~ 330 (342)
+|++-||..=|+.+. .+||||-+|+ .-+|..+++...-.+ -=|++--+|++..+..-
T Consensus 2 amarvgpkieithgg-----kkytvfskvt----------hlvprtengeeaeyvvfgpekegvisvvvlapk 59 (127)
T 2x5r_A 2 AMARVGPKIEITHGG-----KKYTVFSKVT----------HLVPRTENGEEAEYVVFGPEKEGVISVVVLAPK 59 (127)
T ss_dssp CCCCCSCSEEEEETT-----EEEEEEEEEC----------SCSCBCTTSCBCEEEEECCCBTTEEEEEEEESS
T ss_pred CccccCCceEEecCC-----eEEEEEEeee----------EeccccCCCceeeEEEECCccccEEEEEEEcCc
Confidence 578888888888754 5899999999 467777765443222 12556666766665443
No 50
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=25.85 E-value=49 Score=32.30 Aligned_cols=48 Identities=15% Similarity=0.228 Sum_probs=40.1
Q ss_pred CCCCCcEEEEeCCC-----CcEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHh
Q 019343 251 PSIRRGSVAWIGSG-----PEFFISLSNHEEWKNSYTVFGSVLPQNMEIVEKIA 299 (342)
Q Consensus 251 ~~~~rG~Vsma~sG-----sqFFItL~d~p~Ldg~~TVFG~Vv~eGmdVldkI~ 299 (342)
...++|.|.+.|+. -|.-|++.|.| -|++.-|+|+|.++.+.+|+-|.
T Consensus 324 ~~r~rGdItIdN~~ygRY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 376 (385)
T 1x7f_A 324 VLQERGQVVIGNNSFGKYKGELQIILKEMP-IDERKNIVGTIAEEELFLLDYVG 376 (385)
T ss_dssp CCBCTTEEEEECGGGGGGTTCEEEECSCBC-CCTTEEEEEEECGGGGGGGGGCC
T ss_pred CcccCCcEEEeCCCccccccEeeEEcccCC-CCCCeeEEEEECHHHHHHHHhcC
Confidence 34579999999975 59999999964 56788899999988899988775
Done!