Query 019346
Match_columns 342
No_of_seqs 245 out of 1975
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 14:40:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019346.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019346hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nks_A Protoporphyrinogen oxid 99.9 5.4E-24 1.9E-28 198.9 21.6 255 57-334 2-294 (477)
2 1s3e_A Amine oxidase [flavin-c 99.9 1.8E-23 6.2E-28 197.4 22.8 258 56-334 3-272 (520)
3 3ka7_A Oxidoreductase; structu 99.9 3.4E-23 1.2E-27 190.6 21.5 253 58-334 1-256 (425)
4 3i6d_A Protoporphyrinogen oxid 99.9 1.5E-23 5.3E-28 195.3 16.9 260 57-334 5-293 (470)
5 4gde_A UDP-galactopyranose mut 99.9 2.3E-24 8E-29 203.1 11.4 255 55-334 8-280 (513)
6 3nrn_A Uncharacterized protein 99.9 4.7E-23 1.6E-27 189.5 19.6 245 58-334 1-247 (421)
7 2ivd_A PPO, PPOX, protoporphyr 99.9 7.8E-23 2.7E-27 191.1 21.1 256 52-334 11-298 (478)
8 2vvm_A Monoamine oxidase N; FA 99.9 2.4E-22 8.1E-27 188.6 21.4 261 57-334 39-316 (495)
9 4dgk_A Phytoene dehydrogenase; 99.9 1.7E-22 5.8E-27 189.9 17.4 257 58-331 2-279 (501)
10 3lov_A Protoporphyrinogen oxid 99.9 1.6E-22 5.6E-27 188.8 16.9 262 57-334 4-293 (475)
11 3p1w_A Rabgdi protein; GDI RAB 99.9 9.6E-22 3.3E-26 180.6 21.4 262 54-329 17-313 (475)
12 2yg5_A Putrescine oxidase; oxi 99.9 6.2E-22 2.1E-26 183.8 19.8 261 57-334 5-272 (453)
13 1sez_A Protoporphyrinogen oxid 99.9 2.2E-22 7.5E-27 189.3 15.5 260 56-334 12-312 (504)
14 3k7m_X 6-hydroxy-L-nicotine ox 99.9 1.2E-19 4.1E-24 167.2 24.6 254 58-334 2-263 (431)
15 2bcg_G Secretory pathway GDP d 99.8 1.6E-20 5.6E-25 173.9 17.0 258 55-331 9-301 (453)
16 2b9w_A Putative aminooxidase; 99.8 3E-20 1E-24 170.9 15.3 253 56-334 5-262 (424)
17 1d5t_A Guanine nucleotide diss 99.8 1.9E-19 6.4E-24 165.8 19.6 258 56-331 5-291 (433)
18 4dsg_A UDP-galactopyranose mut 99.8 2.4E-20 8.1E-25 174.0 13.8 249 55-334 7-274 (484)
19 1rsg_A FMS1 protein; FAD bindi 99.8 5.2E-19 1.8E-23 166.7 12.5 239 56-332 7-259 (516)
20 2jae_A L-amino acid oxidase; o 99.8 8E-19 2.7E-23 164.4 13.0 254 55-334 9-300 (489)
21 2iid_A L-amino-acid oxidase; f 99.8 2.9E-17 9.8E-22 154.1 20.8 258 55-334 31-302 (498)
22 1v0j_A UDP-galactopyranose mut 99.8 7.2E-20 2.5E-24 166.7 1.3 240 56-334 6-253 (399)
23 2bi7_A UDP-galactopyranose mut 99.7 1.5E-18 5E-23 157.2 8.4 234 57-334 3-242 (384)
24 2e1m_A L-glutamate oxidase; L- 99.7 3.2E-17 1.1E-21 146.7 15.0 81 54-134 41-131 (376)
25 3hdq_A UDP-galactopyranose mut 99.7 3.6E-18 1.2E-22 154.0 8.8 236 54-333 26-266 (397)
26 1i8t_A UDP-galactopyranose mut 99.7 1.1E-18 3.7E-23 157.1 5.1 235 57-334 1-239 (367)
27 1b37_A Protein (polyamine oxid 99.7 2.4E-17 8.1E-22 153.6 13.8 250 56-334 3-274 (472)
28 4gut_A Lysine-specific histone 99.7 1.6E-16 5.6E-21 154.8 18.8 79 55-133 334-413 (776)
29 1vg0_A RAB proteins geranylger 99.7 1.9E-14 6.4E-19 136.1 24.9 118 203-325 311-432 (650)
30 3dje_A Fructosyl amine: oxygen 99.7 1.2E-15 4E-20 140.9 14.5 63 271-334 160-225 (438)
31 3ayj_A Pro-enzyme of L-phenyla 99.6 4.1E-16 1.4E-20 149.2 11.2 75 57-131 56-162 (721)
32 3nyc_A D-arginine dehydrogenas 99.6 2.1E-16 7.3E-21 142.9 8.5 62 270-334 152-213 (381)
33 3ps9_A TRNA 5-methylaminomethy 99.6 7.1E-15 2.4E-19 142.7 18.1 62 271-334 416-477 (676)
34 3dme_A Conserved exported prot 99.6 2.6E-16 8.9E-21 141.6 6.2 63 271-334 149-213 (369)
35 2gag_B Heterotetrameric sarcos 99.6 1.8E-15 6.1E-20 138.0 11.4 60 271-332 173-232 (405)
36 3qj4_A Renalase; FAD/NAD(P)-bi 99.6 1.1E-14 3.7E-19 129.9 15.4 59 271-334 111-169 (342)
37 2oln_A NIKD protein; flavoprot 99.6 7E-15 2.4E-19 133.8 14.0 60 271-333 152-211 (397)
38 3pvc_A TRNA 5-methylaminomethy 99.6 2.3E-14 7.8E-19 139.3 17.9 62 271-334 411-473 (689)
39 1y56_B Sarcosine oxidase; dehy 99.6 4.2E-15 1.4E-19 134.6 11.4 60 271-332 148-207 (382)
40 2uzz_A N-methyl-L-tryptophan o 99.6 7E-15 2.4E-19 132.6 12.7 61 271-334 148-208 (372)
41 1yvv_A Amine oxidase, flavin-c 99.6 2.3E-14 7.9E-19 127.3 15.0 70 57-127 2-71 (336)
42 2gf3_A MSOX, monomeric sarcosi 99.6 1.3E-14 4.6E-19 131.5 13.3 61 271-334 149-209 (389)
43 1ryi_A Glycine oxidase; flavop 99.6 1.8E-14 6.2E-19 130.3 13.5 60 271-333 163-222 (382)
44 2i0z_A NAD(FAD)-utilizing dehy 99.6 1.2E-14 4.1E-19 134.3 11.2 58 272-330 134-191 (447)
45 3k30_A Histamine dehydrogenase 99.6 1.3E-14 4.4E-19 141.0 11.7 98 1-98 323-432 (690)
46 4at0_A 3-ketosteroid-delta4-5a 99.5 1.2E-13 3.9E-18 129.8 16.7 58 273-330 203-264 (510)
47 3axb_A Putative oxidoreductase 99.5 5.3E-15 1.8E-19 136.8 6.7 63 271-334 180-258 (448)
48 1y0p_A Fumarate reductase flav 99.5 4.9E-14 1.7E-18 134.2 12.4 60 272-331 255-318 (571)
49 2z3y_A Lysine-specific histone 99.5 2.6E-13 8.9E-18 131.1 17.3 78 54-132 104-182 (662)
50 2xag_A Lysine-specific histone 99.5 2.9E-13 9.8E-18 133.0 17.3 77 55-132 276-353 (852)
51 3v76_A Flavoprotein; structura 99.5 9.1E-14 3.1E-18 126.8 11.7 57 271-330 131-187 (417)
52 1qo8_A Flavocytochrome C3 fuma 99.5 8.2E-14 2.8E-18 132.5 11.7 60 272-331 250-313 (566)
53 3da1_A Glycerol-3-phosphate de 99.5 1E-13 3.5E-18 131.3 11.7 62 270-332 168-234 (561)
54 1pj5_A N,N-dimethylglycine oxi 99.5 1.5E-13 5.2E-18 136.3 13.2 61 270-332 149-209 (830)
55 2rgh_A Alpha-glycerophosphate 99.4 6.5E-13 2.2E-17 126.1 13.6 63 270-333 186-253 (571)
56 3c4n_A Uncharacterized protein 99.4 3.1E-14 1.1E-18 129.9 3.9 58 271-331 171-237 (405)
57 3nlc_A Uncharacterized protein 99.4 2.7E-13 9.3E-18 127.1 9.5 59 272-331 220-278 (549)
58 2gqf_A Hypothetical protein HI 99.4 2.2E-12 7.6E-17 117.2 13.3 58 271-330 108-168 (401)
59 2qcu_A Aerobic glycerol-3-phos 99.4 8.2E-13 2.8E-17 123.7 10.2 61 270-332 147-212 (501)
60 3nix_A Flavoprotein/dehydrogen 99.4 3E-12 1E-16 117.3 12.5 59 272-330 106-166 (421)
61 1d4d_A Flavocytochrome C fumar 99.4 7.5E-12 2.6E-16 119.0 15.1 59 272-330 255-317 (572)
62 2wdq_A Succinate dehydrogenase 99.4 1.9E-11 6.6E-16 116.3 17.7 60 272-331 143-207 (588)
63 3rp8_A Flavoprotein monooxygen 99.4 1.5E-12 5E-17 118.9 8.8 54 273-330 128-181 (407)
64 3cgv_A Geranylgeranyl reductas 99.3 5.3E-12 1.8E-16 114.6 12.4 57 273-330 103-162 (397)
65 1chu_A Protein (L-aspartate ox 99.3 1E-11 3.5E-16 117.0 13.3 60 272-331 138-209 (540)
66 3i3l_A Alkylhalidase CMLS; fla 99.3 1.7E-11 5.9E-16 116.4 14.0 58 272-330 128-188 (591)
67 3fmw_A Oxygenase; mithramycin, 99.3 6.8E-12 2.3E-16 118.9 10.2 58 273-330 149-207 (570)
68 2bs2_A Quinol-fumarate reducta 99.3 3.7E-11 1.3E-15 115.4 14.8 59 272-331 158-221 (660)
69 2h88_A Succinate dehydrogenase 99.3 4.1E-11 1.4E-15 114.3 15.0 59 272-331 155-218 (621)
70 2weu_A Tryptophan 5-halogenase 99.3 7.7E-11 2.6E-15 110.7 16.8 60 271-331 172-231 (511)
71 3itj_A Thioredoxin reductase 1 99.3 1.3E-11 4.6E-16 109.3 10.9 46 53-98 18-67 (338)
72 3kkj_A Amine oxidase, flavin-c 99.3 6.1E-12 2.1E-16 108.1 7.8 68 57-125 2-69 (336)
73 2qa1_A PGAE, polyketide oxygen 99.3 2.4E-11 8.1E-16 113.6 12.1 57 273-331 107-166 (500)
74 1mo9_A ORF3; nucleotide bindin 99.3 1.9E-11 6.6E-16 115.0 11.4 58 272-329 255-315 (523)
75 2x3n_A Probable FAD-dependent 99.3 5.4E-12 1.8E-16 114.8 7.4 59 272-331 107-167 (399)
76 2qa2_A CABE, polyketide oxygen 99.3 3.5E-11 1.2E-15 112.5 13.0 57 273-331 108-167 (499)
77 3ihg_A RDME; flavoenzyme, anth 99.3 3.1E-11 1.1E-15 114.1 12.3 59 272-330 120-183 (535)
78 3o0h_A Glutathione reductase; 99.3 1.3E-11 4.3E-16 115.2 9.5 56 272-329 232-287 (484)
79 2gmh_A Electron transfer flavo 99.3 2.7E-11 9.2E-16 115.3 11.5 59 273-331 145-218 (584)
80 4a9w_A Monooxygenase; baeyer-v 99.3 4.9E-11 1.7E-15 106.4 12.7 58 274-334 78-136 (357)
81 1c0p_A D-amino acid oxidase; a 99.2 5E-12 1.7E-16 113.5 5.9 39 56-94 5-43 (363)
82 3oz2_A Digeranylgeranylglycero 99.2 5E-11 1.7E-15 107.9 12.3 57 273-330 103-162 (397)
83 2vou_A 2,6-dihydroxypyridine h 99.2 1.3E-10 4.5E-15 105.5 15.0 45 285-331 110-154 (397)
84 3gwf_A Cyclohexanone monooxyge 99.2 3.7E-11 1.3E-15 113.2 11.3 60 274-333 89-150 (540)
85 3alj_A 2-methyl-3-hydroxypyrid 99.2 5E-11 1.7E-15 107.6 11.7 55 272-331 107-161 (379)
86 4ap3_A Steroid monooxygenase; 99.2 5.2E-11 1.8E-15 112.4 12.3 43 55-97 19-61 (549)
87 2aqj_A Tryptophan halogenase, 99.2 1.3E-10 4.3E-15 109.9 14.5 60 271-331 164-223 (538)
88 3lxd_A FAD-dependent pyridine 99.2 9.7E-12 3.3E-16 113.7 6.6 58 271-329 193-250 (415)
89 1rp0_A ARA6, thiazole biosynth 99.2 1.1E-10 3.7E-15 101.1 12.8 40 56-95 38-78 (284)
90 3e1t_A Halogenase; flavoprotei 99.2 3E-11 1E-15 113.4 9.4 57 273-330 112-172 (512)
91 2e4g_A Tryptophan halogenase; 99.2 3.4E-10 1.2E-14 107.2 16.7 60 271-331 193-253 (550)
92 3fg2_P Putative rubredoxin red 99.2 2.6E-11 8.8E-16 110.5 8.5 58 271-329 183-240 (404)
93 1kf6_A Fumarate reductase flav 99.2 4E-10 1.4E-14 107.4 16.8 60 272-332 134-199 (602)
94 4dna_A Probable glutathione re 99.2 2.2E-11 7.4E-16 113.0 7.3 56 272-329 211-267 (463)
95 4fk1_A Putative thioredoxin re 99.2 1.1E-10 3.7E-15 102.2 11.3 38 56-94 5-42 (304)
96 1k0i_A P-hydroxybenzoate hydro 99.2 7.6E-11 2.6E-15 107.0 10.6 58 273-331 104-164 (394)
97 2pyx_A Tryptophan halogenase; 99.2 6.1E-10 2.1E-14 104.9 17.1 60 271-331 174-234 (526)
98 1w4x_A Phenylacetone monooxyge 99.2 1.7E-10 5.8E-15 109.0 13.1 42 55-96 14-55 (542)
99 2e5v_A L-aspartate oxidase; ar 99.2 1.8E-10 6.2E-15 106.8 13.1 57 272-331 119-177 (472)
100 3uox_A Otemo; baeyer-villiger 99.2 7.9E-11 2.7E-15 111.1 10.5 42 55-96 7-48 (545)
101 2cul_A Glucose-inhibited divis 99.2 1.3E-10 4.3E-15 97.6 10.5 58 273-332 69-127 (232)
102 3ab1_A Ferredoxin--NADP reduct 99.2 1.5E-10 5.1E-15 103.7 11.6 53 276-329 78-130 (360)
103 3g3e_A D-amino-acid oxidase; F 99.2 3.9E-12 1.3E-16 113.7 1.2 51 270-334 140-190 (351)
104 3ef6_A Toluene 1,2-dioxygenase 99.2 1.6E-11 5.5E-16 112.0 5.1 57 272-330 185-241 (410)
105 2bry_A NEDD9 interacting prote 99.2 1.5E-10 5.2E-15 108.1 11.8 59 273-331 167-231 (497)
106 3atr_A Conserved archaeal prot 99.2 2.1E-10 7.1E-15 106.1 12.3 58 273-331 101-163 (453)
107 3jsk_A Cypbp37 protein; octame 99.2 5E-10 1.7E-14 98.3 13.9 40 56-95 78-119 (344)
108 3urh_A Dihydrolipoyl dehydroge 99.2 4E-11 1.4E-15 112.0 7.5 42 56-97 24-65 (491)
109 2zbw_A Thioredoxin reductase; 99.1 2.1E-10 7.2E-15 101.6 11.5 40 57-96 5-44 (335)
110 3f8d_A Thioredoxin reductase ( 99.1 8.3E-11 2.8E-15 103.5 8.7 51 276-329 74-124 (323)
111 3lzw_A Ferredoxin--NADP reduct 99.1 2E-10 6.7E-15 101.5 10.4 40 57-96 7-46 (332)
112 2zxi_A TRNA uridine 5-carboxym 99.1 2.3E-10 7.8E-15 108.0 11.3 57 273-331 124-181 (637)
113 3oc4_A Oxidoreductase, pyridin 99.1 7.1E-11 2.4E-15 109.2 7.7 56 272-330 189-244 (452)
114 3d1c_A Flavin-containing putat 99.1 1.9E-10 6.4E-15 103.3 10.3 55 274-331 90-144 (369)
115 3ces_A MNMG, tRNA uridine 5-ca 99.1 4.4E-10 1.5E-14 106.5 13.0 57 273-331 125-182 (651)
116 1fec_A Trypanothione reductase 99.1 6.5E-11 2.2E-15 110.5 6.9 58 272-330 231-288 (490)
117 1jnr_A Adenylylsulfate reducta 99.1 1.1E-09 3.9E-14 105.2 15.4 59 273-331 152-219 (643)
118 1xdi_A RV3303C-LPDA; reductase 99.1 1.4E-10 4.8E-15 108.5 8.5 57 272-330 223-279 (499)
119 3lad_A Dihydrolipoamide dehydr 99.1 3.9E-10 1.3E-14 104.9 11.2 56 272-329 221-279 (476)
120 2xdo_A TETX2 protein; tetracyc 99.1 1.5E-09 5E-14 98.6 14.7 40 55-94 24-63 (398)
121 2yqu_A 2-oxoglutarate dehydrog 99.1 4.1E-10 1.4E-14 104.1 11.0 57 272-330 208-264 (455)
122 4hb9_A Similarities with proba 99.1 1.2E-10 4.2E-15 105.9 7.3 45 286-331 123-167 (412)
123 2gjc_A Thiazole biosynthetic e 99.1 3.2E-09 1.1E-13 92.6 15.8 41 56-96 64-106 (326)
124 3c96_A Flavin-containing monoo 99.1 6.3E-10 2.2E-14 101.5 11.8 56 273-331 108-170 (410)
125 3r9u_A Thioredoxin reductase; 99.1 3.8E-10 1.3E-14 98.9 9.9 42 56-98 3-45 (315)
126 3gyx_A Adenylylsulfate reducta 99.1 7.9E-10 2.7E-14 106.2 12.4 59 272-330 166-233 (662)
127 1onf_A GR, grase, glutathione 99.1 2.2E-09 7.4E-14 100.5 15.1 57 272-329 217-274 (500)
128 1o94_A Tmadh, trimethylamine d 99.1 9.4E-11 3.2E-15 114.4 6.1 97 1-98 320-430 (729)
129 1ges_A Glutathione reductase; 99.1 1.3E-09 4.6E-14 100.5 13.3 56 273-329 209-264 (450)
130 2r9z_A Glutathione amide reduc 99.1 1.7E-09 5.7E-14 100.2 13.8 55 273-329 208-263 (463)
131 3ics_A Coenzyme A-disulfide re 99.0 2.6E-09 8.9E-14 102.0 14.9 54 272-329 228-281 (588)
132 3iwa_A FAD-dependent pyridine 99.0 2.2E-09 7.5E-14 99.7 13.9 56 272-329 202-257 (472)
133 2qae_A Lipoamide, dihydrolipoy 99.0 2.3E-10 7.8E-15 106.2 7.1 41 57-97 2-42 (468)
134 3dk9_A Grase, GR, glutathione 99.0 2.6E-10 8.8E-15 106.2 7.5 58 272-329 228-292 (478)
135 2r0c_A REBC; flavin adenine di 99.0 1.6E-09 5.6E-14 102.4 12.8 61 56-132 25-85 (549)
136 3s5w_A L-ornithine 5-monooxyge 99.0 7.8E-10 2.7E-14 102.5 10.2 38 56-93 29-71 (463)
137 2gv8_A Monooxygenase; FMO, FAD 99.0 5.5E-10 1.9E-14 103.0 9.1 42 56-97 5-48 (447)
138 1trb_A Thioredoxin reductase; 99.0 6.3E-10 2.2E-14 97.8 9.1 56 273-329 185-246 (320)
139 2wpf_A Trypanothione reductase 99.0 1.7E-10 5.9E-15 107.7 5.6 56 273-329 236-291 (495)
140 1ps9_A 2,4-dienoyl-COA reducta 99.0 2.8E-10 9.4E-15 110.3 7.1 94 1-97 309-413 (671)
141 2hqm_A GR, grase, glutathione 99.0 4.6E-10 1.6E-14 104.5 8.4 57 273-329 227-284 (479)
142 2ywl_A Thioredoxin reductase r 99.0 3.1E-09 1.1E-13 85.3 12.2 53 274-330 58-110 (180)
143 2q7v_A Thioredoxin reductase; 99.0 1.5E-09 5.2E-14 95.7 11.1 40 56-96 7-46 (325)
144 1q1r_A Putidaredoxin reductase 99.0 7.4E-10 2.5E-14 101.6 9.2 58 272-329 191-249 (431)
145 1y56_A Hypothetical protein PH 99.0 3.4E-09 1.2E-13 98.9 13.3 51 278-330 263-313 (493)
146 2q0l_A TRXR, thioredoxin reduc 99.0 1.5E-09 5.1E-14 95.0 10.3 38 58-96 2-40 (311)
147 3cty_A Thioredoxin reductase; 99.0 1.3E-09 4.4E-14 95.8 9.8 41 56-97 15-55 (319)
148 1zmd_A Dihydrolipoyl dehydroge 99.0 3.3E-10 1.1E-14 105.4 6.0 42 56-97 5-46 (474)
149 2xve_A Flavin-containing monoo 99.0 3.6E-09 1.2E-13 97.9 12.8 41 58-98 3-49 (464)
150 2dkh_A 3-hydroxybenzoate hydro 99.0 1.7E-09 5.8E-14 104.1 10.7 59 273-331 142-212 (639)
151 1zk7_A HGII, reductase, mercur 99.0 2.1E-09 7.1E-14 99.8 10.8 56 272-330 216-271 (467)
152 3cp8_A TRNA uridine 5-carboxym 99.0 1.6E-09 5.5E-14 102.6 9.6 59 273-333 118-177 (641)
153 1fl2_A Alkyl hydroperoxide red 99.0 1.7E-09 5.7E-14 94.7 8.7 52 278-329 62-114 (310)
154 3dgh_A TRXR-1, thioredoxin red 99.0 4.2E-09 1.4E-13 98.1 11.9 57 272-329 227-288 (483)
155 3fbs_A Oxidoreductase; structu 99.0 2.9E-09 9.8E-14 92.4 10.1 34 57-90 2-35 (297)
156 4a5l_A Thioredoxin reductase; 98.9 5.4E-09 1.9E-13 91.5 11.5 35 57-91 4-38 (314)
157 2cdu_A NADPH oxidase; flavoenz 98.9 7.7E-10 2.6E-14 102.2 6.3 56 272-329 191-246 (452)
158 1vdc_A NTR, NADPH dependent th 98.9 2.5E-09 8.6E-14 94.5 9.0 51 276-330 74-124 (333)
159 3ntd_A FAD-dependent pyridine 98.9 1.1E-08 3.8E-13 97.1 13.3 57 272-329 192-266 (565)
160 1v59_A Dihydrolipoamide dehydr 98.9 5E-09 1.7E-13 97.5 10.2 41 57-97 5-45 (478)
161 1lvl_A Dihydrolipoamide dehydr 98.9 3.4E-09 1.2E-13 98.0 9.0 41 56-97 4-44 (458)
162 1hyu_A AHPF, alkyl hydroperoxi 98.9 5E-09 1.7E-13 98.4 10.1 53 277-329 272-325 (521)
163 2a87_A TRXR, TR, thioredoxin r 98.9 7.7E-09 2.6E-13 91.5 10.8 40 55-95 12-51 (335)
164 2v3a_A Rubredoxin reductase; a 98.9 6.7E-10 2.3E-14 100.4 3.9 57 272-330 187-243 (384)
165 2eq6_A Pyruvate dehydrogenase 98.9 7.2E-09 2.5E-13 96.0 11.0 55 273-329 211-270 (464)
166 4b1b_A TRXR, thioredoxin reduc 98.9 2.8E-09 9.5E-14 100.1 8.2 55 272-328 263-317 (542)
167 3h8l_A NADH oxidase; membrane 98.9 9.2E-09 3.2E-13 93.7 11.4 52 272-329 218-269 (409)
168 1dxl_A Dihydrolipoamide dehydr 98.9 1.2E-08 4.1E-13 94.7 12.3 43 55-97 4-46 (470)
169 3klj_A NAD(FAD)-dependent dehy 98.9 1E-08 3.5E-13 92.5 10.7 46 280-329 70-115 (385)
170 1ojt_A Surface protein; redox- 98.9 1.3E-08 4.6E-13 94.7 11.7 41 57-97 6-46 (482)
171 2gqw_A Ferredoxin reductase; f 98.8 1.3E-09 4.3E-14 99.4 4.0 52 272-329 187-238 (408)
172 1m6i_A Programmed cell death p 98.8 8.5E-10 2.9E-14 103.0 2.7 57 272-330 226-282 (493)
173 3ic9_A Dihydrolipoamide dehydr 98.8 1.1E-08 3.9E-13 95.4 10.3 39 57-96 8-46 (492)
174 3qfa_A Thioredoxin reductase 1 98.8 6.4E-08 2.2E-12 90.9 15.4 36 55-90 30-65 (519)
175 3dgz_A Thioredoxin reductase 2 98.8 5.1E-08 1.7E-12 90.9 13.8 34 55-88 4-37 (488)
176 3l8k_A Dihydrolipoyl dehydroge 98.8 1.2E-08 3.9E-13 94.7 9.1 42 57-98 4-45 (466)
177 4eqs_A Coenzyme A disulfide re 98.8 4.2E-08 1.4E-12 90.1 12.2 53 271-329 187-239 (437)
178 3h28_A Sulfide-quinone reducta 98.8 2.4E-08 8.2E-13 91.6 10.3 39 57-95 2-42 (430)
179 3qvp_A Glucose oxidase; oxidor 98.8 3.8E-08 1.3E-12 93.0 11.7 37 54-90 16-53 (583)
180 1ebd_A E3BD, dihydrolipoamide 98.8 4E-08 1.4E-12 90.7 11.6 40 57-97 3-42 (455)
181 2a8x_A Dihydrolipoyl dehydroge 98.8 4.2E-08 1.4E-12 90.8 11.7 39 57-96 3-41 (464)
182 3fpz_A Thiazole biosynthetic e 98.8 4.5E-09 1.5E-13 92.8 4.4 43 55-97 63-107 (326)
183 1pn0_A Phenol 2-monooxygenase; 98.7 5E-08 1.7E-12 94.1 11.7 61 57-133 8-73 (665)
184 3vrd_B FCCB subunit, flavocyto 98.7 3.6E-09 1.2E-13 96.2 2.3 46 282-329 212-257 (401)
185 4b63_A L-ornithine N5 monooxyg 98.7 9.2E-08 3.1E-12 89.3 11.8 42 53-94 35-76 (501)
186 2gag_A Heterotetrameric sarcos 98.7 1.4E-07 4.7E-12 94.8 13.6 41 57-97 128-168 (965)
187 4gcm_A TRXR, thioredoxin reduc 98.7 1.8E-08 6E-13 88.3 5.8 42 56-98 5-46 (312)
188 3q9t_A Choline dehydrogenase a 98.7 2.9E-08 9.8E-13 93.9 7.2 37 55-91 4-41 (577)
189 1n4w_A CHOD, cholesterol oxida 98.7 1.6E-07 5.5E-12 87.8 11.8 59 274-332 223-290 (504)
190 3kd9_A Coenzyme A disulfide re 98.6 1E-07 3.4E-12 87.9 9.4 37 57-93 3-41 (449)
191 4g6h_A Rotenone-insensitive NA 98.6 7.4E-08 2.5E-12 89.9 8.5 55 271-327 271-329 (502)
192 1xhc_A NADH oxidase /nitrite r 98.6 2E-07 6.7E-12 83.6 10.5 34 57-91 8-41 (367)
193 3t37_A Probable dehydrogenase; 98.6 7.5E-08 2.6E-12 90.6 8.1 38 54-91 14-52 (526)
194 1nhp_A NADH peroxidase; oxidor 98.6 5.5E-07 1.9E-11 82.9 13.2 36 58-93 1-38 (447)
195 3fim_B ARYL-alcohol oxidase; A 98.6 9.1E-08 3.1E-12 90.3 8.0 36 57-92 2-38 (566)
196 3sx6_A Sulfide-quinone reducta 98.6 6.3E-08 2.2E-12 88.9 6.7 34 57-90 4-40 (437)
197 3cgb_A Pyridine nucleotide-dis 98.6 4.9E-07 1.7E-11 84.0 12.7 37 57-93 36-74 (480)
198 1coy_A Cholesterol oxidase; ox 98.6 4.1E-07 1.4E-11 85.1 12.2 58 274-331 228-294 (507)
199 3hyw_A Sulfide-quinone reducta 98.6 1.6E-07 5.4E-12 86.1 9.2 51 274-328 202-254 (430)
200 2bc0_A NADH oxidase; flavoprot 98.5 4.4E-07 1.5E-11 84.6 11.7 38 56-93 34-74 (490)
201 2jbv_A Choline oxidase; alcoho 98.5 8.8E-07 3E-11 83.5 12.0 38 56-93 12-50 (546)
202 2vdc_G Glutamate synthase [NAD 98.4 2.2E-07 7.7E-12 85.5 6.7 43 55-97 120-162 (456)
203 1nhp_A NADH peroxidase; oxidor 98.3 3.6E-06 1.2E-10 77.4 12.3 36 56-91 148-183 (447)
204 1v59_A Dihydrolipoamide dehydr 98.3 3.4E-06 1.2E-10 78.3 12.1 35 57-91 183-217 (478)
205 1ebd_A E3BD, dihydrolipoamide 98.3 4.7E-06 1.6E-10 76.8 11.2 35 57-91 170-204 (455)
206 3ihm_A Styrene monooxygenase A 98.3 5.5E-07 1.9E-11 82.4 4.6 35 56-90 21-55 (430)
207 2bc0_A NADH oxidase; flavoprot 98.3 8.7E-06 3E-10 75.8 12.7 49 278-329 242-290 (490)
208 3c4a_A Probable tryptophan hyd 98.2 8.1E-07 2.8E-11 80.0 5.4 35 58-92 1-37 (381)
209 3cgb_A Pyridine nucleotide-dis 98.2 6.4E-06 2.2E-10 76.5 11.0 50 278-330 233-282 (480)
210 1ojt_A Surface protein; redox- 98.2 4.4E-06 1.5E-10 77.6 9.9 50 278-329 232-285 (482)
211 3pl8_A Pyranose 2-oxidase; sub 98.2 9.1E-07 3.1E-11 84.6 5.2 41 56-96 45-85 (623)
212 2a8x_A Dihydrolipoyl dehydroge 98.2 1.4E-05 4.7E-10 73.9 12.3 35 57-91 171-205 (464)
213 1dxl_A Dihydrolipoamide dehydr 98.1 1.4E-05 4.8E-10 73.9 10.4 35 57-91 177-211 (470)
214 3g5s_A Methylenetetrahydrofola 98.1 3.4E-06 1.2E-10 74.7 5.7 36 58-93 2-37 (443)
215 1xhc_A NADH oxidase /nitrite r 98.1 1.2E-05 4.2E-10 71.8 9.0 34 58-91 144-177 (367)
216 1gte_A Dihydropyrimidine dehyd 98.0 4.1E-06 1.4E-10 84.8 5.9 41 56-96 186-227 (1025)
217 1lqt_A FPRA; NADP+ derivative, 98.0 3.3E-06 1.1E-10 77.7 4.3 40 57-96 3-49 (456)
218 3s5w_A L-ornithine 5-monooxyge 98.0 6.6E-05 2.3E-09 69.2 13.0 36 56-91 226-263 (463)
219 2x8g_A Thioredoxin glutathione 98.0 4.5E-06 1.5E-10 79.7 4.9 35 55-89 105-139 (598)
220 1cjc_A Protein (adrenodoxin re 98.0 6.6E-06 2.3E-10 75.8 5.4 41 56-96 5-47 (460)
221 1kdg_A CDH, cellobiose dehydro 98.0 5.8E-06 2E-10 78.1 5.1 38 55-92 5-42 (546)
222 3dgz_A Thioredoxin reductase 2 97.9 0.00014 4.9E-09 67.5 13.0 32 58-89 186-217 (488)
223 2zbw_A Thioredoxin reductase; 97.8 0.00014 4.8E-09 63.8 11.6 35 56-90 151-185 (335)
224 1ju2_A HydroxynitrIle lyase; f 97.8 9.2E-06 3.2E-10 76.4 3.3 38 55-93 24-61 (536)
225 3kd9_A Coenzyme A disulfide re 97.8 0.00018 6E-09 66.1 11.7 35 57-91 148-182 (449)
226 3ab1_A Ferredoxin--NADP reduct 97.8 0.00013 4.5E-09 64.8 10.5 34 57-90 163-196 (360)
227 3d1c_A Flavin-containing putat 97.7 0.00016 5.5E-09 64.3 10.1 34 57-90 166-199 (369)
228 3uox_A Otemo; baeyer-villiger 97.7 0.00078 2.7E-08 63.3 15.1 49 275-330 341-391 (545)
229 3qfa_A Thioredoxin reductase 1 97.7 0.00044 1.5E-08 64.7 12.8 31 58-88 211-241 (519)
230 2x8g_A Thioredoxin glutathione 97.6 0.00043 1.5E-08 66.0 12.3 32 58-89 287-318 (598)
231 3gwf_A Cyclohexanone monooxyge 97.6 0.0017 5.7E-08 61.0 14.9 50 276-331 334-385 (540)
232 1fl2_A Alkyl hydroperoxide red 97.6 0.00092 3.1E-08 57.8 12.4 34 57-90 144-177 (310)
233 2q0l_A TRXR, thioredoxin reduc 97.5 0.001 3.5E-08 57.6 12.3 34 57-90 143-176 (311)
234 3l8k_A Dihydrolipoyl dehydroge 97.5 0.00046 1.6E-08 63.6 9.9 35 57-91 172-206 (466)
235 1gpe_A Protein (glucose oxidas 97.5 8.2E-05 2.8E-09 70.7 4.7 38 55-92 22-60 (587)
236 2q7v_A Thioredoxin reductase; 97.4 0.0017 6E-08 56.5 12.4 34 57-90 152-185 (325)
237 3fbs_A Oxidoreductase; structu 97.4 0.00099 3.4E-08 57.1 10.1 43 281-329 183-225 (297)
238 3f8d_A Thioredoxin reductase ( 97.3 0.0029 9.9E-08 54.8 12.7 34 57-90 154-187 (323)
239 1o94_A Tmadh, trimethylamine d 97.2 0.0013 4.3E-08 64.3 9.4 35 56-90 527-563 (729)
240 3lzw_A Ferredoxin--NADP reduct 97.2 0.0026 9.1E-08 55.3 10.6 34 57-90 154-187 (332)
241 3fwz_A Inner membrane protein 96.9 0.0018 6.2E-08 49.0 6.2 39 53-91 3-41 (140)
242 4gcm_A TRXR, thioredoxin reduc 96.7 0.0014 4.8E-08 56.8 5.0 36 58-93 146-181 (312)
243 2g1u_A Hypothetical protein TM 96.7 0.0021 7.3E-08 49.5 5.5 40 52-91 14-53 (155)
244 3klj_A NAD(FAD)-dependent dehy 96.6 0.0021 7.1E-08 57.7 5.4 38 57-94 146-183 (385)
245 1lss_A TRK system potassium up 96.5 0.003 1E-07 47.4 5.1 34 57-90 4-37 (140)
246 2v3a_A Rubredoxin reductase; a 96.5 0.0026 8.9E-08 56.9 5.3 38 57-94 145-182 (384)
247 2gqw_A Ferredoxin reductase; f 96.5 0.0052 1.8E-07 55.5 7.0 38 57-94 145-182 (408)
248 1lvl_A Dihydrolipoamide dehydr 96.4 0.0034 1.2E-07 57.7 5.2 38 57-94 171-208 (458)
249 2eq6_A Pyruvate dehydrogenase 96.3 0.0039 1.3E-07 57.3 5.5 36 58-93 170-205 (464)
250 4a5l_A Thioredoxin reductase; 96.3 0.0037 1.3E-07 54.0 4.9 36 56-91 151-186 (314)
251 3ef6_A Toluene 1,2-dioxygenase 96.3 0.0049 1.7E-07 55.7 5.9 38 57-94 143-180 (410)
252 2yqu_A 2-oxoglutarate dehydrog 96.3 0.0044 1.5E-07 56.8 5.5 36 57-92 167-202 (455)
253 4eqs_A Coenzyme A disulfide re 96.3 0.0078 2.7E-07 54.9 7.1 38 57-94 147-184 (437)
254 3llv_A Exopolyphosphatase-rela 96.2 0.0064 2.2E-07 45.8 5.3 33 58-90 7-39 (141)
255 3ic5_A Putative saccharopine d 96.2 0.0055 1.9E-07 44.4 4.6 34 57-90 5-39 (118)
256 4b63_A L-ornithine N5 monooxyg 96.1 0.35 1.2E-05 44.7 17.3 35 56-90 245-281 (501)
257 1ges_A Glutathione reductase; 96.1 0.0073 2.5E-07 55.3 5.8 37 57-93 167-203 (450)
258 1id1_A Putative potassium chan 96.1 0.0095 3.2E-07 45.6 5.6 34 57-90 3-36 (153)
259 3c85_A Putative glutathione-re 95.9 0.011 3.9E-07 46.6 5.5 35 56-90 38-73 (183)
260 2r9z_A Glutathione amide reduc 95.9 0.0098 3.4E-07 54.6 5.8 37 57-93 166-202 (463)
261 2x5o_A UDP-N-acetylmuramoylala 95.9 0.0073 2.5E-07 55.1 4.9 36 58-93 6-41 (439)
262 1zmd_A Dihydrolipoyl dehydroge 95.8 0.011 3.6E-07 54.6 5.5 38 57-94 178-215 (474)
263 2cdu_A NADPH oxidase; flavoenz 95.8 0.0074 2.5E-07 55.2 4.4 37 57-93 149-185 (452)
264 3ado_A Lambda-crystallin; L-gu 95.8 0.0093 3.2E-07 51.6 4.8 35 56-90 5-39 (319)
265 3lk7_A UDP-N-acetylmuramoylala 95.7 0.0095 3.2E-07 54.5 5.0 35 56-90 8-42 (451)
266 1q1r_A Putidaredoxin reductase 95.7 0.013 4.4E-07 53.3 5.8 37 57-93 149-185 (431)
267 3ic9_A Dihydrolipoamide dehydr 95.7 0.012 4.1E-07 54.5 5.7 38 57-94 174-211 (492)
268 3fg2_P Putative rubredoxin red 95.7 0.0095 3.3E-07 53.6 4.8 38 57-94 142-179 (404)
269 2hmt_A YUAA protein; RCK, KTN, 95.7 0.014 4.7E-07 43.9 5.0 33 58-90 7-39 (144)
270 1f0y_A HCDH, L-3-hydroxyacyl-C 95.6 0.014 4.9E-07 50.2 5.6 34 57-90 15-48 (302)
271 3e8x_A Putative NAD-dependent 95.6 0.014 4.9E-07 48.1 5.2 37 55-91 19-56 (236)
272 2hqm_A GR, grase, glutathione 95.6 0.015 5.2E-07 53.6 5.8 37 57-93 185-221 (479)
273 3l4b_C TRKA K+ channel protien 95.6 0.012 4.1E-07 48.0 4.6 34 58-91 1-34 (218)
274 1pzg_A LDH, lactate dehydrogen 95.5 0.018 6E-07 50.4 5.8 36 55-90 7-43 (331)
275 1onf_A GR, grase, glutathione 95.5 0.013 4.5E-07 54.3 5.2 37 57-93 176-212 (500)
276 4b1b_A TRXR, thioredoxin reduc 95.5 0.015 5.2E-07 54.4 5.6 36 58-93 224-259 (542)
277 3i83_A 2-dehydropantoate 2-red 95.4 0.016 5.6E-07 50.3 5.1 33 58-90 3-35 (320)
278 2xve_A Flavin-containing monoo 95.4 0.019 6.4E-07 52.8 5.6 37 56-92 196-232 (464)
279 1zk7_A HGII, reductase, mercur 95.4 0.017 6E-07 53.0 5.5 37 57-93 176-212 (467)
280 3dfz_A SIRC, precorrin-2 dehyd 95.3 0.02 6.7E-07 46.8 5.0 35 55-89 29-63 (223)
281 2qae_A Lipoamide, dihydrolipoy 95.3 0.019 6.4E-07 52.8 5.5 37 57-93 174-210 (468)
282 4ap3_A Steroid monooxygenase; 95.3 0.015 5.2E-07 54.6 4.7 36 56-91 190-225 (549)
283 1kyq_A Met8P, siroheme biosynt 95.2 0.013 4.5E-07 49.5 3.8 35 56-90 12-46 (274)
284 2a9f_A Putative malic enzyme ( 95.2 0.019 6.6E-07 50.7 5.0 37 54-90 185-222 (398)
285 3lxd_A FAD-dependent pyridine 95.2 0.024 8.3E-07 51.1 5.8 38 57-94 152-189 (415)
286 1vdc_A NTR, NADPH dependent th 95.2 0.019 6.4E-07 50.0 4.9 37 56-92 158-194 (333)
287 3urh_A Dihydrolipoyl dehydroge 95.2 0.021 7E-07 52.9 5.4 38 57-94 198-235 (491)
288 3ntd_A FAD-dependent pyridine 95.2 0.023 7.7E-07 53.6 5.7 37 57-93 151-187 (565)
289 3hn2_A 2-dehydropantoate 2-red 95.2 0.017 5.9E-07 50.0 4.5 33 58-90 3-35 (312)
290 3vtf_A UDP-glucose 6-dehydroge 95.1 0.023 7.9E-07 51.4 5.3 38 53-90 17-54 (444)
291 2a87_A TRXR, TR, thioredoxin r 95.1 0.021 7.3E-07 49.7 5.0 37 56-92 154-190 (335)
292 1trb_A Thioredoxin reductase; 95.1 0.021 7.3E-07 49.2 4.9 36 57-92 145-180 (320)
293 4dio_A NAD(P) transhydrogenase 95.1 0.026 9E-07 50.3 5.4 36 56-91 189-224 (405)
294 3dk9_A Grase, GR, glutathione 95.1 0.025 8.4E-07 52.2 5.5 37 57-93 187-223 (478)
295 2y0c_A BCEC, UDP-glucose dehyd 95.1 0.024 8.1E-07 52.2 5.3 35 56-90 7-41 (478)
296 2gv8_A Monooxygenase; FMO, FAD 95.0 0.023 7.9E-07 51.8 5.1 37 56-92 211-248 (447)
297 1ks9_A KPA reductase;, 2-dehyd 95.0 0.027 9.1E-07 48.0 5.1 34 58-91 1-34 (291)
298 3oc4_A Oxidoreductase, pyridin 95.0 0.031 1E-06 51.1 5.8 38 57-94 147-184 (452)
299 4e12_A Diketoreductase; oxidor 94.9 0.027 9.4E-07 48.0 5.0 33 58-90 5-37 (283)
300 1vl6_A Malate oxidoreductase; 94.9 0.027 9.3E-07 49.7 5.0 36 54-89 189-225 (388)
301 2wpf_A Trypanothione reductase 94.9 0.03 1E-06 51.9 5.6 37 57-93 191-230 (495)
302 2raf_A Putative dinucleotide-b 94.9 0.034 1.2E-06 45.0 5.2 36 56-91 18-53 (209)
303 3g17_A Similar to 2-dehydropan 94.9 0.026 8.8E-07 48.4 4.7 34 57-90 2-35 (294)
304 2dpo_A L-gulonate 3-dehydrogen 94.9 0.031 1.1E-06 48.5 5.2 34 57-90 6-39 (319)
305 3eag_A UDP-N-acetylmuramate:L- 94.9 0.031 1E-06 48.8 5.2 35 57-91 4-39 (326)
306 3p2y_A Alanine dehydrogenase/p 94.8 0.028 9.7E-07 49.7 4.9 35 56-90 183-217 (381)
307 1fec_A Trypanothione reductase 94.8 0.032 1.1E-06 51.6 5.6 37 57-93 187-226 (490)
308 3lad_A Dihydrolipoamide dehydr 94.8 0.036 1.2E-06 51.0 5.9 37 57-93 180-216 (476)
309 1lld_A L-lactate dehydrogenase 94.8 0.031 1.1E-06 48.5 5.2 34 57-90 7-42 (319)
310 2vdc_G Glutamate synthase [NAD 94.8 0.038 1.3E-06 50.6 5.9 37 56-92 263-300 (456)
311 3gg2_A Sugar dehydrogenase, UD 94.8 0.03 1E-06 51.1 5.1 33 58-90 3-35 (450)
312 3itj_A Thioredoxin reductase 1 94.7 0.031 1E-06 48.6 4.9 36 56-91 172-207 (338)
313 3doj_A AT3G25530, dehydrogenas 94.7 0.04 1.4E-06 47.6 5.5 37 55-91 19-55 (310)
314 3k6j_A Protein F01G10.3, confi 94.7 0.051 1.7E-06 49.5 6.2 35 57-91 54-88 (460)
315 3cty_A Thioredoxin reductase; 94.7 0.028 9.5E-07 48.6 4.4 36 57-92 155-190 (319)
316 2hjr_A Malate dehydrogenase; m 94.6 0.042 1.4E-06 47.9 5.4 34 57-90 14-48 (328)
317 3ghy_A Ketopantoate reductase 94.6 0.039 1.3E-06 48.2 5.3 32 58-89 4-35 (335)
318 3k96_A Glycerol-3-phosphate de 94.5 0.04 1.4E-06 48.6 5.2 35 56-90 28-62 (356)
319 1mo9_A ORF3; nucleotide bindin 94.5 0.038 1.3E-06 51.6 5.3 36 58-93 215-250 (523)
320 3ics_A Coenzyme A-disulfide re 94.5 0.043 1.5E-06 52.0 5.7 37 57-93 187-223 (588)
321 4a7p_A UDP-glucose dehydrogena 94.5 0.046 1.6E-06 49.7 5.6 36 56-91 7-42 (446)
322 2ew2_A 2-dehydropantoate 2-red 94.5 0.04 1.4E-06 47.5 5.0 33 58-90 4-36 (316)
323 1xdi_A RV3303C-LPDA; reductase 94.5 0.049 1.7E-06 50.5 5.8 37 57-93 182-218 (499)
324 2v6b_A L-LDH, L-lactate dehydr 94.4 0.043 1.5E-06 47.3 5.0 33 58-90 1-35 (304)
325 1hyu_A AHPF, alkyl hydroperoxi 94.4 0.035 1.2E-06 51.8 4.7 36 57-92 355-390 (521)
326 3g79_A NDP-N-acetyl-D-galactos 94.4 0.041 1.4E-06 50.5 5.0 35 57-91 18-54 (478)
327 1cjc_A Protein (adrenodoxin re 94.4 0.08 2.7E-06 48.5 7.0 36 56-91 144-200 (460)
328 3hwr_A 2-dehydropantoate 2-red 94.3 0.045 1.5E-06 47.5 5.0 35 55-90 17-51 (318)
329 3ego_A Probable 2-dehydropanto 94.3 0.046 1.6E-06 47.2 4.9 33 57-90 2-34 (307)
330 2ewd_A Lactate dehydrogenase,; 94.3 0.05 1.7E-06 47.2 5.1 34 57-90 4-38 (317)
331 3dgh_A TRXR-1, thioredoxin red 94.2 0.067 2.3E-06 49.3 6.1 34 57-90 187-220 (483)
332 1zej_A HBD-9, 3-hydroxyacyl-CO 94.2 0.052 1.8E-06 46.4 4.9 34 56-90 11-44 (293)
333 3iwa_A FAD-dependent pyridine 94.2 0.052 1.8E-06 49.9 5.3 37 57-93 159-196 (472)
334 4g65_A TRK system potassium up 94.2 0.023 8E-07 52.0 2.9 35 56-90 2-36 (461)
335 1z82_A Glycerol-3-phosphate de 94.1 0.055 1.9E-06 47.3 5.2 34 56-89 13-46 (335)
336 3pef_A 6-phosphogluconate dehy 94.1 0.059 2E-06 45.9 5.1 34 58-91 2-35 (287)
337 1t2d_A LDH-P, L-lactate dehydr 94.0 0.07 2.4E-06 46.3 5.6 34 57-90 4-38 (322)
338 1mv8_A GMD, GDP-mannose 6-dehy 94.0 0.044 1.5E-06 49.9 4.5 33 58-90 1-33 (436)
339 3r9u_A Thioredoxin reductase; 94.0 0.06 2E-06 46.1 5.1 36 57-92 147-182 (315)
340 3dtt_A NADP oxidoreductase; st 94.0 0.07 2.4E-06 44.3 5.3 38 54-91 16-53 (245)
341 1bg6_A N-(1-D-carboxylethyl)-L 93.9 0.063 2.1E-06 47.3 5.1 33 58-90 5-37 (359)
342 1x13_A NAD(P) transhydrogenase 93.9 0.065 2.2E-06 48.1 5.2 36 56-91 171-206 (401)
343 1zcj_A Peroxisomal bifunctiona 93.9 0.081 2.8E-06 48.5 6.0 34 57-90 37-70 (463)
344 3g0o_A 3-hydroxyisobutyrate de 93.9 0.067 2.3E-06 46.0 5.1 35 56-90 6-40 (303)
345 4dll_A 2-hydroxy-3-oxopropiona 93.9 0.059 2E-06 46.8 4.8 36 55-90 29-64 (320)
346 2vns_A Metalloreductase steap3 93.9 0.077 2.6E-06 43.1 5.2 35 56-90 27-61 (215)
347 1guz_A Malate dehydrogenase; o 93.9 0.07 2.4E-06 46.1 5.3 33 58-90 1-35 (310)
348 1jw9_B Molybdopterin biosynthe 93.9 0.059 2E-06 44.9 4.6 35 57-91 31-66 (249)
349 4dna_A Probable glutathione re 93.8 0.073 2.5E-06 48.7 5.5 37 57-93 170-206 (463)
350 3oj0_A Glutr, glutamyl-tRNA re 93.8 0.03 1E-06 42.3 2.4 34 57-90 21-54 (144)
351 3o0h_A Glutathione reductase; 93.7 0.075 2.6E-06 49.0 5.5 37 57-93 191-227 (484)
352 1txg_A Glycerol-3-phosphate de 93.7 0.059 2E-06 46.9 4.5 31 58-88 1-31 (335)
353 4g6h_A Rotenone-insensitive NA 93.7 0.056 1.9E-06 50.1 4.5 58 58-132 218-289 (502)
354 3l9w_A Glutathione-regulated p 93.7 0.077 2.6E-06 47.8 5.3 35 57-91 4-38 (413)
355 3pid_A UDP-glucose 6-dehydroge 93.6 0.067 2.3E-06 48.3 4.8 35 55-90 34-68 (432)
356 1l7d_A Nicotinamide nucleotide 93.6 0.089 3E-06 46.9 5.6 36 56-91 171-206 (384)
357 3gvi_A Malate dehydrogenase; N 93.6 0.093 3.2E-06 45.5 5.5 34 57-90 7-41 (324)
358 1ur5_A Malate dehydrogenase; o 93.6 0.089 3E-06 45.4 5.3 33 58-90 3-36 (309)
359 1jay_A Coenzyme F420H2:NADP+ o 93.5 0.081 2.8E-06 42.7 4.8 33 58-90 1-34 (212)
360 3qha_A Putative oxidoreductase 93.5 0.062 2.1E-06 46.0 4.3 35 57-91 15-49 (296)
361 1nyt_A Shikimate 5-dehydrogena 93.5 0.091 3.1E-06 44.4 5.3 34 57-90 119-152 (271)
362 1dlj_A UDP-glucose dehydrogena 93.5 0.058 2E-06 48.5 4.2 32 58-90 1-32 (402)
363 1pjc_A Protein (L-alanine dehy 93.4 0.095 3.3E-06 46.3 5.4 34 57-90 167-200 (361)
364 3ius_A Uncharacterized conserv 93.4 0.082 2.8E-06 44.8 4.8 36 56-91 4-39 (286)
365 3phh_A Shikimate dehydrogenase 93.4 0.11 3.8E-06 43.7 5.4 35 57-91 118-152 (269)
366 3tl2_A Malate dehydrogenase; c 93.3 0.094 3.2E-06 45.3 5.1 33 57-89 8-41 (315)
367 1y6j_A L-lactate dehydrogenase 93.3 0.089 3.1E-06 45.6 5.0 34 57-90 7-42 (318)
368 1a5z_A L-lactate dehydrogenase 93.3 0.08 2.7E-06 45.9 4.6 33 58-90 1-35 (319)
369 3mog_A Probable 3-hydroxybutyr 93.3 0.087 3E-06 48.5 5.1 33 58-90 6-38 (483)
370 4ffl_A PYLC; amino acid, biosy 93.3 0.1 3.6E-06 46.0 5.5 34 58-91 2-35 (363)
371 3ldh_A Lactate dehydrogenase; 93.2 0.15 5.1E-06 44.2 6.2 35 56-90 20-56 (330)
372 2qyt_A 2-dehydropantoate 2-red 93.2 0.061 2.1E-06 46.4 3.7 32 57-88 8-45 (317)
373 3pdu_A 3-hydroxyisobutyrate de 93.2 0.072 2.4E-06 45.4 4.1 34 58-91 2-35 (287)
374 4a9w_A Monooxygenase; baeyer-v 93.2 0.08 2.7E-06 46.2 4.5 34 56-90 162-195 (357)
375 1oju_A MDH, malate dehydrogena 93.1 0.094 3.2E-06 44.8 4.6 33 58-90 1-35 (294)
376 3qsg_A NAD-binding phosphogluc 93.0 0.092 3.1E-06 45.4 4.6 34 56-89 23-57 (312)
377 3ew7_A LMO0794 protein; Q8Y8U8 93.0 0.13 4.3E-06 41.5 5.3 33 58-90 1-34 (221)
378 2eez_A Alanine dehydrogenase; 93.0 0.12 4.1E-06 45.8 5.4 35 56-90 165-199 (369)
379 3l6d_A Putative oxidoreductase 93.0 0.17 5.8E-06 43.5 6.2 35 56-90 8-42 (306)
380 1pjq_A CYSG, siroheme synthase 92.9 0.099 3.4E-06 47.8 4.9 34 56-89 11-44 (457)
381 2i6t_A Ubiquitin-conjugating e 92.9 0.1 3.6E-06 44.8 4.8 34 57-90 14-49 (303)
382 1gte_A Dihydropyrimidine dehyd 92.9 0.09 3.1E-06 53.3 5.0 33 58-90 333-366 (1025)
383 2uyy_A N-PAC protein; long-cha 92.9 0.15 5.1E-06 44.0 5.8 35 57-91 30-64 (316)
384 1m6i_A Programmed cell death p 92.9 0.11 3.9E-06 47.9 5.4 36 57-92 180-219 (493)
385 1p77_A Shikimate 5-dehydrogena 92.9 0.092 3.1E-06 44.4 4.4 35 56-90 118-152 (272)
386 1hyh_A L-hicdh, L-2-hydroxyiso 92.9 0.099 3.4E-06 45.1 4.6 33 58-90 2-36 (309)
387 1evy_A Glycerol-3-phosphate de 92.9 0.08 2.7E-06 46.8 4.1 32 59-90 17-48 (366)
388 3gpi_A NAD-dependent epimerase 92.8 0.16 5.3E-06 43.0 5.8 34 58-91 4-37 (286)
389 2h78_A Hibadh, 3-hydroxyisobut 92.8 0.1 3.5E-06 44.8 4.6 34 57-90 3-36 (302)
390 3p7m_A Malate dehydrogenase; p 92.8 0.14 4.9E-06 44.3 5.5 34 57-90 5-39 (321)
391 4ezb_A Uncharacterized conserv 92.8 0.11 3.8E-06 45.0 4.8 34 57-90 24-58 (317)
392 4e21_A 6-phosphogluconate dehy 92.8 0.13 4.3E-06 45.4 5.1 34 57-90 22-55 (358)
393 3h2s_A Putative NADH-flavin re 92.7 0.14 4.9E-06 41.4 5.1 33 58-90 1-34 (224)
394 2f1k_A Prephenate dehydrogenas 92.7 0.13 4.4E-06 43.5 5.0 33 58-90 1-33 (279)
395 2egg_A AROE, shikimate 5-dehyd 92.7 0.13 4.4E-06 44.1 4.9 35 56-90 140-175 (297)
396 3pqe_A L-LDH, L-lactate dehydr 92.7 0.14 4.7E-06 44.5 5.2 34 57-90 5-40 (326)
397 3nep_X Malate dehydrogenase; h 92.6 0.12 4.2E-06 44.6 4.8 33 58-90 1-35 (314)
398 3k30_A Histamine dehydrogenase 92.6 0.18 6.2E-06 48.7 6.5 40 56-95 522-563 (690)
399 1lqt_A FPRA; NADP+ derivative, 92.6 0.23 7.8E-06 45.4 6.8 37 56-92 146-203 (456)
400 3h8v_A Ubiquitin-like modifier 92.6 0.11 3.6E-06 44.4 4.2 36 56-91 35-71 (292)
401 3dfu_A Uncharacterized protein 92.6 0.039 1.3E-06 45.3 1.5 34 56-89 5-38 (232)
402 4aj2_A L-lactate dehydrogenase 92.6 0.16 5.6E-06 44.1 5.5 36 55-90 17-54 (331)
403 3ggo_A Prephenate dehydrogenas 92.6 0.17 5.9E-06 43.7 5.7 35 56-90 32-68 (314)
404 2pv7_A T-protein [includes: ch 92.5 0.18 6.3E-06 43.1 5.8 34 57-90 21-55 (298)
405 2o3j_A UDP-glucose 6-dehydroge 92.5 0.12 4.3E-06 47.5 5.0 33 57-89 9-43 (481)
406 1yqg_A Pyrroline-5-carboxylate 92.5 0.13 4.3E-06 43.1 4.7 33 58-90 1-34 (263)
407 3hyw_A Sulfide-quinone reducta 92.5 0.054 1.8E-06 49.1 2.5 44 281-329 65-108 (430)
408 4huj_A Uncharacterized protein 92.5 0.08 2.7E-06 43.2 3.3 34 57-90 23-57 (220)
409 3rui_A Ubiquitin-like modifier 92.5 0.16 5.5E-06 44.2 5.3 36 56-91 33-69 (340)
410 4id9_A Short-chain dehydrogena 92.4 0.15 5.1E-06 44.5 5.2 38 54-91 16-54 (347)
411 3ojo_A CAP5O; rossmann fold, c 92.4 0.11 3.7E-06 47.0 4.3 34 57-90 11-44 (431)
412 2vhw_A Alanine dehydrogenase; 92.4 0.16 5.5E-06 45.1 5.4 35 56-90 167-201 (377)
413 1vpd_A Tartronate semialdehyde 92.3 0.13 4.3E-06 44.1 4.5 33 58-90 6-38 (299)
414 4b4o_A Epimerase family protei 92.3 0.19 6.5E-06 42.8 5.6 34 58-91 1-35 (298)
415 2gag_A Heterotetrameric sarcos 92.3 0.087 3E-06 53.0 3.9 35 58-92 285-319 (965)
416 3c24_A Putative oxidoreductase 92.2 0.22 7.5E-06 42.3 5.8 34 57-90 11-45 (286)
417 2gf2_A Hibadh, 3-hydroxyisobut 92.1 0.15 5.1E-06 43.5 4.7 32 59-90 2-33 (296)
418 2qrj_A Saccharopine dehydrogen 92.1 0.14 4.8E-06 45.4 4.5 40 56-95 213-257 (394)
419 1zud_1 Adenylyltransferase THI 92.1 0.15 5.2E-06 42.5 4.6 36 56-91 27-63 (251)
420 2zqz_A L-LDH, L-lactate dehydr 92.1 0.17 5.8E-06 43.9 5.0 36 54-89 6-43 (326)
421 3vku_A L-LDH, L-lactate dehydr 92.1 0.18 6E-06 43.8 5.1 35 55-89 7-43 (326)
422 3ktd_A Prephenate dehydrogenas 92.0 0.2 6.8E-06 43.8 5.4 35 56-90 7-41 (341)
423 1kdg_A CDH, cellobiose dehydro 92.0 0.21 7.1E-06 46.8 5.9 55 277-332 200-263 (546)
424 2wtb_A MFP2, fatty acid multif 92.0 0.18 6.1E-06 48.9 5.5 33 58-90 313-345 (725)
425 2hk9_A Shikimate dehydrogenase 91.9 0.16 5.4E-06 43.0 4.6 34 57-90 129-162 (275)
426 3don_A Shikimate dehydrogenase 91.9 0.15 5.2E-06 43.1 4.4 36 56-91 116-152 (277)
427 1ldn_A L-lactate dehydrogenase 91.9 0.21 7.1E-06 43.2 5.4 35 56-90 5-41 (316)
428 1yj8_A Glycerol-3-phosphate de 91.9 0.12 4.1E-06 45.9 4.0 34 58-91 22-62 (375)
429 2aef_A Calcium-gated potassium 91.9 0.077 2.6E-06 43.6 2.5 35 56-91 8-42 (234)
430 1hdo_A Biliverdin IX beta redu 91.8 0.21 7.3E-06 39.6 5.1 33 58-90 4-37 (206)
431 2pzm_A Putative nucleotide sug 91.8 0.25 8.5E-06 42.8 5.8 36 55-90 18-54 (330)
432 1w4x_A Phenylacetone monooxyge 91.8 0.16 5.5E-06 47.5 4.9 49 275-330 341-391 (542)
433 3u62_A Shikimate dehydrogenase 91.8 0.21 7.1E-06 41.7 5.0 34 56-90 108-142 (253)
434 2rir_A Dipicolinate synthase, 91.7 0.22 7.7E-06 42.6 5.4 35 56-90 156-190 (300)
435 2q3e_A UDP-glucose 6-dehydroge 91.7 0.13 4.4E-06 47.2 4.0 33 58-90 6-40 (467)
436 3tnl_A Shikimate dehydrogenase 91.7 0.23 7.9E-06 42.8 5.3 34 56-89 153-187 (315)
437 3fi9_A Malate dehydrogenase; s 91.6 0.22 7.5E-06 43.5 5.2 33 57-89 8-43 (343)
438 3cky_A 2-hydroxymethyl glutara 91.6 0.18 6E-06 43.2 4.6 34 57-90 4-37 (301)
439 3jyo_A Quinate/shikimate dehyd 91.6 0.23 8E-06 42.1 5.3 35 56-90 126-161 (283)
440 1x0v_A GPD-C, GPDH-C, glycerol 91.6 0.11 3.8E-06 45.6 3.3 34 58-91 9-49 (354)
441 2g5c_A Prephenate dehydrogenas 91.6 0.21 7.2E-06 42.2 5.0 33 58-90 2-36 (281)
442 2p4q_A 6-phosphogluconate dehy 91.5 0.23 7.9E-06 45.8 5.5 35 56-90 9-43 (497)
443 3d4o_A Dipicolinate synthase s 91.5 0.25 8.5E-06 42.2 5.4 35 56-90 154-188 (293)
444 3fbt_A Chorismate mutase and s 91.5 0.21 7.2E-06 42.3 4.8 35 56-90 121-156 (282)
445 4gwg_A 6-phosphogluconate dehy 91.5 0.22 7.4E-06 45.7 5.2 34 57-90 4-37 (484)
446 2x0j_A Malate dehydrogenase; o 91.4 0.18 6.2E-06 43.0 4.4 33 58-90 1-35 (294)
447 2rcy_A Pyrroline carboxylate r 91.4 0.2 6.9E-06 41.8 4.7 34 58-91 5-42 (262)
448 3pwz_A Shikimate dehydrogenase 91.4 0.25 8.6E-06 41.7 5.2 35 56-90 119-154 (272)
449 3d0o_A L-LDH 1, L-lactate dehy 91.4 0.2 6.8E-06 43.4 4.7 33 57-89 6-40 (317)
450 2dvm_A Malic enzyme, 439AA lon 91.4 0.21 7.1E-06 45.1 4.9 32 56-87 185-219 (439)
451 1edz_A 5,10-methylenetetrahydr 91.4 0.18 6.3E-06 43.4 4.4 35 55-89 175-210 (320)
452 3c7a_A Octopine dehydrogenase; 91.3 0.11 3.9E-06 46.5 3.2 30 58-87 3-33 (404)
453 2izz_A Pyrroline-5-carboxylate 91.3 0.22 7.7E-06 43.1 5.0 34 57-90 22-59 (322)
454 2pgd_A 6-phosphogluconate dehy 91.2 0.22 7.5E-06 45.9 5.1 33 58-90 3-35 (482)
455 3h5n_A MCCB protein; ubiquitin 91.2 0.22 7.5E-06 43.8 4.9 36 56-91 117-153 (353)
456 2cvz_A Dehydrogenase, 3-hydrox 91.2 0.18 6.1E-06 42.8 4.2 32 58-90 2-33 (289)
457 3gt0_A Pyrroline-5-carboxylate 91.2 0.27 9.3E-06 40.7 5.3 33 58-90 3-39 (247)
458 3o8q_A Shikimate 5-dehydrogena 91.2 0.26 8.9E-06 41.8 5.1 35 56-90 125-160 (281)
459 1wdk_A Fatty oxidation complex 91.1 0.22 7.4E-06 48.3 5.1 34 57-90 314-347 (715)
460 1nvt_A Shikimate 5'-dehydrogen 91.1 0.19 6.6E-06 42.7 4.3 32 57-89 128-159 (287)
461 2zyd_A 6-phosphogluconate dehy 91.1 0.2 6.9E-06 46.0 4.6 35 56-90 14-48 (480)
462 3zwc_A Peroxisomal bifunctiona 91.0 0.28 9.5E-06 47.6 5.7 34 57-90 316-349 (742)
463 3t4e_A Quinate/shikimate dehyd 91.0 0.31 1E-05 42.0 5.4 34 56-89 147-181 (312)
464 1mld_A Malate dehydrogenase; o 90.9 0.21 7.2E-06 43.1 4.4 33 58-90 1-36 (314)
465 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.9 0.23 7.8E-06 45.7 4.8 33 58-90 2-34 (478)
466 1ez4_A Lactate dehydrogenase; 90.9 0.23 7.9E-06 42.9 4.6 33 57-89 5-39 (318)
467 1i36_A Conserved hypothetical 90.8 0.22 7.4E-06 41.7 4.3 30 59-88 2-31 (264)
468 3vps_A TUNA, NAD-dependent epi 90.7 0.34 1.2E-05 41.4 5.7 36 56-91 6-42 (321)
469 1np3_A Ketol-acid reductoisome 90.7 0.31 1.1E-05 42.5 5.3 33 58-90 17-49 (338)
470 2d5c_A AROE, shikimate 5-dehyd 90.7 0.29 1E-05 41.0 5.0 32 59-90 118-149 (263)
471 3d1l_A Putative NADP oxidoredu 90.6 0.27 9.2E-06 41.2 4.7 34 57-90 10-44 (266)
472 3tri_A Pyrroline-5-carboxylate 90.6 0.35 1.2E-05 40.9 5.4 34 57-90 3-39 (280)
473 4gbj_A 6-phosphogluconate dehy 90.6 0.21 7E-06 42.8 4.0 35 57-91 5-39 (297)
474 2ahr_A Putative pyrroline carb 90.6 0.26 8.8E-06 41.1 4.5 33 58-90 4-36 (259)
475 2d4a_B Malate dehydrogenase; a 90.5 0.27 9.3E-06 42.3 4.7 32 59-90 1-33 (308)
476 4gsl_A Ubiquitin-like modifier 90.5 0.31 1.1E-05 45.7 5.4 41 56-96 325-366 (615)
477 3dqp_A Oxidoreductase YLBE; al 90.5 0.26 9E-06 39.7 4.5 34 58-91 1-35 (219)
478 3nv9_A Malic enzyme; rossmann 90.5 0.24 8.2E-06 44.5 4.4 38 55-92 217-257 (487)
479 3ond_A Adenosylhomocysteinase; 90.5 0.31 1.1E-05 44.5 5.2 35 56-90 264-298 (488)
480 1y1p_A ARII, aldehyde reductas 90.5 0.5 1.7E-05 40.8 6.5 35 55-89 9-44 (342)
481 3rkr_A Short chain oxidoreduct 90.5 0.31 1.1E-05 40.6 5.0 35 56-90 28-63 (262)
482 1lu9_A Methylene tetrahydromet 90.4 0.37 1.3E-05 40.9 5.4 33 57-89 119-152 (287)
483 3vh1_A Ubiquitin-like modifier 90.4 0.29 9.9E-06 45.8 5.0 36 56-91 326-362 (598)
484 1yb4_A Tartronic semialdehyde 90.3 0.19 6.5E-06 42.8 3.5 32 58-90 4-35 (295)
485 1npy_A Hypothetical shikimate 90.2 0.31 1.1E-05 41.0 4.8 33 57-89 119-152 (271)
486 1leh_A Leucine dehydrogenase; 90.1 0.37 1.2E-05 42.5 5.2 34 56-89 172-205 (364)
487 4hv4_A UDP-N-acetylmuramate--L 90.1 0.21 7.3E-06 46.1 3.9 34 57-90 22-56 (494)
488 1y8q_A Ubiquitin-like 1 activa 90.1 0.35 1.2E-05 42.3 5.1 36 56-91 35-71 (346)
489 1smk_A Malate dehydrogenase, g 90.0 0.23 7.9E-06 43.1 3.9 35 56-90 7-44 (326)
490 3dhn_A NAD-dependent epimerase 89.9 0.27 9.2E-06 39.9 4.0 34 58-91 5-39 (227)
491 1tt5_B Ubiquitin-activating en 89.8 0.39 1.3E-05 43.4 5.3 36 56-91 39-75 (434)
492 1a4i_A Methylenetetrahydrofola 89.6 0.41 1.4E-05 40.7 4.9 35 55-89 163-198 (301)
493 3ko8_A NAD-dependent epimerase 89.6 0.43 1.5E-05 40.8 5.3 34 58-91 1-35 (312)
494 1gpj_A Glutamyl-tRNA reductase 89.6 0.36 1.2E-05 43.3 4.9 35 56-90 166-201 (404)
495 2x4g_A Nucleoside-diphosphate- 89.4 0.49 1.7E-05 40.9 5.6 35 57-91 13-48 (342)
496 4a26_A Putative C-1-tetrahydro 89.4 0.44 1.5E-05 40.5 4.9 35 55-89 163-198 (300)
497 3r6d_A NAD-dependent epimerase 89.4 0.63 2.2E-05 37.5 5.9 32 59-90 7-40 (221)
498 1kjq_A GART 2, phosphoribosylg 89.3 0.61 2.1E-05 41.4 6.2 39 54-92 8-46 (391)
499 4gx0_A TRKA domain protein; me 89.2 0.45 1.5E-05 44.7 5.5 34 58-91 349-382 (565)
500 2iz1_A 6-phosphogluconate dehy 89.2 0.39 1.4E-05 44.0 4.9 33 58-90 6-38 (474)
No 1
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.92 E-value=5.4e-24 Score=198.89 Aligned_cols=255 Identities=21% Similarity=0.223 Sum_probs=168.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCCCCCcceeeeccCCCceeecceeEecCC---cccHHHHHHHcCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGA---YPNIQNLFGELGIN 131 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~l~~~~gi~ 131 (342)
.+||+|||||++||+||++|+++|+ +|+|||+++++||.+.+....+++.++.|++.+... +..+.++++++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 3699999999999999999999999 999999999999999887656789999999988653 55678999999998
Q ss_pred cccccccc------ceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhcc
Q 019346 132 DRLQWKEH------SMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQD 205 (342)
Q Consensus 132 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (342)
........ ..+... .+.... ++..... + ..................+... ....+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~---~g~~~~--~p~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 142 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLYV---GGALHA--LPTGLRG----L---LRPSPPFSKPLFWAGLRELTKP-------RGKEP 142 (477)
T ss_dssp GGEEEECTTSHHHHCEEEEE---TTEEEE--CCCSSCC----------CCTTSCSCSSHHHHTTTTSC-------CCCSS
T ss_pred ceeeecCCCCchhcceEEEE---CCEEEE--CCCChhh----c---ccccchhhhHHHHHHHHhhhcC-------CCCCC
Confidence 65332110 001100 011100 0000000 0 0000000000001111111100 11224
Q ss_pred CCCHHHHHHHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhhhh---------------------------c
Q 019346 206 GLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE---------------------------K 258 (342)
Q Consensus 206 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~ 258 (342)
..++.+|++.. +...+.+.++.++....+..++++++....+..+...... .
T Consensus 143 ~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~ 221 (477)
T 3nks_A 143 DETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALA 221 (477)
T ss_dssp CCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHH
T ss_pred CcCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcc
Confidence 57899999875 6677788888888888888999998887765443221000 0
Q ss_pred cCcceeecCCCCCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 259 HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 259 ~g~~~~~~~g~~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
.+..+.++.++ +..+++.|.+.+.++|++|+++++|++|..++++. +.|+++++ ++.||+||+|+|++.+..|
T Consensus 222 ~~~~~~~~~gG-~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~-~~v~~~~~-~~~ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 222 ERWSQWSLRGG-LEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGR-WKVSLRDS-SLEADHVISAIPASVLSEL 294 (477)
T ss_dssp TTCSEEEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGC-EEEECSSC-EEEESEEEECSCHHHHHHH
T ss_pred cCccEEEECCC-HHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCce-EEEEECCe-EEEcCEEEECCCHHHHHHh
Confidence 11224455555 78999999999999999999999999999855552 35777555 8999999999999987655
No 2
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.92 E-value=1.8e-23 Score=197.38 Aligned_cols=258 Identities=18% Similarity=0.226 Sum_probs=168.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCCCcccc
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQ 135 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~~~~~ 135 (342)
.++||+|||||++||+||+.|++.|++|+|||+++++||++.+.....+..+|.|++++.+.+..+.++++++|++....
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~ 82 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKV 82 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcceec
Confidence 35799999999999999999999999999999999999999887754588999999999877778899999999875433
Q ss_pred ccccceeeeccCCCCCccccCCCCCCCCchh-----hHHHHHhcCCCCChhHHHHhhhc-cchhhhcCchhhhhccCCCH
Q 019346 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLN-----GILAILRNNEMLTWPEKVKFAIG-LLPAIIGGQAYVEAQDGLTV 209 (342)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 209 (342)
......++... +.. ..+...++.... .+..+.. .+..... +..............+..++
T Consensus 83 ~~~~~~~~~~~---g~~--~~~~~~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 148 (520)
T 1s3e_A 83 NEVERLIHHVK---GKS--YPFRGPFPPVWNPITYLDHNNFWR---------TMDDMGREIPSDAPWKAPLAEEWDNMTM 148 (520)
T ss_dssp CCSSEEEEEET---TEE--EEECSSSCCCCSHHHHHHHHHHHH---------HHHHHHTTSCTTCGGGSTTHHHHHTSBH
T ss_pred ccCCceEEEEC---CEE--EEecCCCCCCCCHHHHHHHHHHHH---------HHHHHHhhcCcCCCccccchhhhhccCH
Confidence 22222222111 111 111111111000 1111110 0111100 00000000011122456899
Q ss_pred HHHHHHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHh------hhhccCcceeecCCCCCcccchHHHHHHH
Q 019346 210 QEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLPIVEHIQ 283 (342)
Q Consensus 210 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~g~~~~~l~~~l~~~l~ 283 (342)
.+|+++..... ....++..+....++.++++++.......+... +....+..+.++.|+ ...+++.|.+.+
T Consensus 149 ~~~l~~~~~~~-~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~~l- 225 (520)
T 1s3e_A 149 KELLDKLCWTE-SAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGG-SGQVSERIMDLL- 225 (520)
T ss_dssp HHHHHHHCSSH-HHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTC-THHHHHHHHHHH-
T ss_pred HHHHHhhCCCH-HHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCC-HHHHHHHHHHHc-
Confidence 99999986554 446677777777777888998887765443321 111123334455555 567777777655
Q ss_pred hcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 284 SLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 284 ~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
|++|++|++|++|..++++ + .|++.+|+++.||+||+|+|++.+..|
T Consensus 226 --g~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~VI~a~p~~~l~~l 272 (520)
T 1s3e_A 226 --GDRVKLERPVIYIDQTREN-V-LVETLNHEMYEAKYVISAIPPTLGMKI 272 (520)
T ss_dssp --GGGEESSCCEEEEECSSSS-E-EEEETTSCEEEESEEEECSCGGGGGGS
T ss_pred --CCcEEcCCeeEEEEECCCe-E-EEEECCCeEEEeCEEEECCCHHHHcce
Confidence 7899999999999875444 3 488889989999999999999988776
No 3
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.91 E-value=3.4e-23 Score=190.64 Aligned_cols=253 Identities=17% Similarity=0.297 Sum_probs=167.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEec--CCcccHHHHHHHcCCCcccc
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFF--GAYPNIQNLFGELGINDRLQ 135 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~--~~~~~~~~l~~~~gi~~~~~ 135 (342)
+||+|||||++||+||++|+++|++|+|||+++.+||++.++. ..|+.++.|++.+. .....+.++++++|++....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLS-YKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIV 79 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEE-ETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeec-cCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEE
Confidence 5999999999999999999999999999999999999998865 46888999975543 23456889999999876543
Q ss_pred ccccceeee-ccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCHHHHHH
Q 019346 136 WKEHSMIFA-MPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (342)
Q Consensus 136 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 214 (342)
......... .......+.. .. ....... ......+.+..+....+..... ...+..++.+|++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~s~~~~l~ 143 (425)
T 3ka7_A 80 RSEMTTVRVPLKKGNPDYVK---GF-KDISFND------FPSLLSYKDRMKIALLIVSTRK------NRPSGSSLQAWIK 143 (425)
T ss_dssp ECCCCEEEEESSTTCCSSTT---CE-EEEEGGG------GGGGSCHHHHHHHHHHHHHTTT------SCCCSSBHHHHHH
T ss_pred ecCCceEEeecCCCcccccc---cc-cceehhh------hhhhCCHHHHHHHHHHHHhhhh------cCCCCCCHHHHHH
Confidence 322111111 1110000000 00 0000000 0011222222222211111000 1124578999999
Q ss_pred HcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhhhhccCcceeecCCCCCcccchHHHHHHHhcCcEEEecce
Q 019346 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSR 294 (342)
Q Consensus 215 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~Gv~i~~~t~ 294 (342)
++ ......+.++.++....+..++++++.......+..... .+. +.++.|+ +..+++.|.+.++++|++|+++++
T Consensus 144 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~-~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~ 218 (425)
T 3ka7_A 144 SQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYR--FGG-TGIPEGG-CKGIIDALETVISANGGKIHTGQE 218 (425)
T ss_dssp HH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTS-HHHHHHHHHHHHHHTTCEEECSCC
T ss_pred Hh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHh--cCC-ccccCCC-HHHHHHHHHHHHHHcCCEEEECCc
Confidence 87 556677777777777777788888888766655554322 122 3455665 678999999999999999999999
Q ss_pred eeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 295 VQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 295 V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
|++|..+ ++.+.+|++. |++++||+||+|+|++.+..|
T Consensus 219 V~~i~~~-~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~l 256 (425)
T 3ka7_A 219 VSKILIE-NGKAAGIIAD-DRIHDADLVISNLGHAATAVL 256 (425)
T ss_dssp EEEEEEE-TTEEEEEEET-TEEEECSEEEECSCHHHHHHH
T ss_pred eeEEEEE-CCEEEEEEEC-CEEEECCEEEECCCHHHHHHh
Confidence 9999984 4556567775 669999999999999987665
No 4
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.91 E-value=1.5e-23 Score=195.33 Aligned_cols=260 Identities=20% Similarity=0.287 Sum_probs=164.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcC------CceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAG------HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGI 130 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g------~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi 130 (342)
.+||+|||||++||+||++|+++| ++|+|||+++++||++.+... .+..++.|++.+...++.+.++++++|+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~~~~~~l~~~lgl 83 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKK-DGYIIERGPDSFLERKKSAPQLVKDLGL 83 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECC-TTCCEESSCCCEETTCTHHHHHHHHTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEecc-CCEEeccChhhhhhCCHHHHHHHHHcCC
Confidence 579999999999999999999999 999999999999999988764 7889999999998888999999999999
Q ss_pred Ccccccc-ccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCH
Q 019346 131 NDRLQWK-EHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTV 209 (342)
Q Consensus 131 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (342)
+...... .....+.. .+....+........+. .+..+.. .....+....+....... +.....+..++
T Consensus 84 ~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~p~-~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~s~ 152 (470)
T 3i6d_A 84 EHLLVNNATGQSYVLV---NRTLHPMPKGAVMGIPT-KIAPFVS-TGLFSLSGKARAAMDFIL------PASKTKDDQSL 152 (470)
T ss_dssp CTTEEECCCCCEEEEC---SSCEEECCC-----------------------CCSHHHHHHHHS------CCCSSSSCCBH
T ss_pred cceeecCCCCccEEEE---CCEEEECCCCcccCCcC-chHHhhc-cCcCCHHHHHHHhcCccc------CCCCCCCCcCH
Confidence 8654322 11111111 11111110000000000 0011110 011111111111111110 00112356889
Q ss_pred HHHHHHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHh-------hhh---------------ccCcceeecC
Q 019346 210 QEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------LQE---------------KHGSKMAFLD 267 (342)
Q Consensus 210 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---------------~~g~~~~~~~ 267 (342)
.+|++.. +...+.+.++.++....+..++++++.......+..+ ... ..+..+..+.
T Consensus 153 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (470)
T 3i6d_A 153 GEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLS 231 (470)
T ss_dssp HHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEET
T ss_pred HHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeC
Confidence 9999886 6777788888888888888888888876543322100 000 0012334445
Q ss_pred CCCCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 268 GNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 268 g~~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
++ +..+++.|.+.+.+ ++|+++++|++|+.++++ +.|+|.+|+++.||+||+|+|++.+..|
T Consensus 232 ~g-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vi~a~p~~~~~~l 293 (470)
T 3i6d_A 232 TG-LQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC--YSLELDNGVTLDADSVIVTAPHKAAAGM 293 (470)
T ss_dssp TC-THHHHHHHHHTCCS--EEEECSCCEEEEEECSSS--EEEEESSSCEEEESEEEECSCHHHHHHH
T ss_pred Ch-HHHHHHHHHHhcCC--CEEEeCCceEEEEEcCCe--EEEEECCCCEEECCEEEECCCHHHHHHH
Confidence 54 56777777666543 799999999999986555 3588999988999999999999987665
No 5
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.91 E-value=2.3e-24 Score=203.14 Aligned_cols=255 Identities=16% Similarity=0.281 Sum_probs=164.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHc-CCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCCCcc
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~-g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~~~ 133 (342)
+..+||+|||||++||+||++|+++ |++|+|||+++++||++.+....+|+.+|.|+|++...++.+.+++++++....
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~~~~~ 87 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKED 87 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHSCSGG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhCCccc
Confidence 3568999999999999999999985 999999999999999998876678899999999999889999999999876532
Q ss_pred c-cccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCHHHH
Q 019346 134 L-QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (342)
Q Consensus 134 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (342)
. ........... .+.+..+.+...+. .............+..... ..........++.+|
T Consensus 88 ~~~~~~~~~~i~~---~g~~~~~p~~~~~~--------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~ 148 (513)
T 4gde_A 88 DWYTHQRISYVRC---QGQWVPYPFQNNIS--------------MLPKEEQVKCIDGMIDAAL--EARVANTKPKTFDEW 148 (513)
T ss_dssp GEEEEECCEEEEE---TTEEEESSGGGGGG--------------GSCHHHHHHHHHHHHHHHH--HHHTCCSCCCSHHHH
T ss_pred eeEEecCceEEEE---CCeEeecchhhhhh--------------hcchhhHHHHHHHHHHHHH--hhhcccccccCHHHH
Confidence 1 11111111111 11111111111000 0001111111111110000 001122345788999
Q ss_pred HHHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHH---------HHHHhhhh----cc--Ccceeec-CCCCCcccch
Q 019346 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILI---------ALNRFLQE----KH--GSKMAFL-DGNPPERLCL 276 (342)
Q Consensus 213 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~----~~--g~~~~~~-~g~~~~~l~~ 276 (342)
+.+. +...+.+.++.++....+..++++++..+... .....+.. .. .....++ .|| +..+++
T Consensus 149 ~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG-~~~l~~ 226 (513)
T 4gde_A 149 IVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGG-TGGIWI 226 (513)
T ss_dssp HHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSH-HHHHHH
T ss_pred HHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCC-HHHHHH
Confidence 8775 55677778888888888777777665433211 11111111 11 1122233 444 778999
Q ss_pred HHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 277 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 277 ~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
.|.+.+.+.|++|++|++|++|..+ ++ .|++.+|+++.||+||+++|...+..+
T Consensus 227 ~l~~~l~~~g~~i~~~~~V~~I~~~-~~---~v~~~~G~~~~ad~vI~t~P~~~l~~~ 280 (513)
T 4gde_A 227 AVANTLPKEKTRFGEKGKVTKVNAN-NK---TVTLQDGTTIGYKKLVSTMAVDFLAEA 280 (513)
T ss_dssp HHHHTSCGGGEEESGGGCEEEEETT-TT---EEEETTSCEEEEEEEEECSCHHHHHHH
T ss_pred HHHHHHHhcCeeeecceEEEEEEcc-CC---EEEEcCCCEEECCEEEECCCHHHHHHh
Confidence 9999999999999999999999863 33 367889999999999999999977554
No 6
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.91 E-value=4.7e-23 Score=189.50 Aligned_cols=245 Identities=17% Similarity=0.224 Sum_probs=164.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecC--CcccHHHHHHHcCCCcccc
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFG--AYPNIQNLFGELGINDRLQ 135 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~--~~~~~~~l~~~~gi~~~~~ 135 (342)
+||+|||||++||+||++|+++|++|+|||+++.+||++.+.. ..++.++.|++.+.. ....+.++++++|+.....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLP-YKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIV 79 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEE-ETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEec-cCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEE
Confidence 5899999999999999999999999999999999999998865 468889999765543 4557889999999865432
Q ss_pred ccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCHHHHHHH
Q 019346 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (342)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 215 (342)
.......+... +.... ++.. . ..+...+............ .. ..+.+..++.+|+++
T Consensus 80 ~~~~~~~~~~~---g~~~~--~~~~----~----------~~l~~~~~~~~~~~~~~~~-~~---~~~~~~~s~~~~l~~ 136 (421)
T 3nrn_A 80 NSNPKGKILWE---GKIFH--YRES----W----------KFLSVKEKAKALKLLAEIR-MN---KLPKEEIPADEWIKE 136 (421)
T ss_dssp ECSSSCEEEET---TEEEE--GGGG----G----------GGCC--------CCHHHHH-TT---CCCCCCSBHHHHHHH
T ss_pred ECCCCeEEEEC---CEEEE--cCCc----h----------hhCCHhHHHHHHHHHHHHH-hc---cCCCCCCCHHHHHHH
Confidence 22211111111 11100 0000 0 0001111111110000000 00 011233789999999
Q ss_pred cCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhhhhccCcceeecCCCCCcccchHHHHHHHhcCcEEEeccee
Q 019346 216 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV 295 (342)
Q Consensus 216 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~Gv~i~~~t~V 295 (342)
.++.......++.++....+..++.+++.......+...... +. +.++.++ +..+++.|.+.++++|++|+++++|
T Consensus 137 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g-~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~V 212 (421)
T 3nrn_A 137 KIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRW--GG-PGLIRGG-CKAVIDELERIIMENKGKILTRKEV 212 (421)
T ss_dssp HTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH--CS-CEEETTC-HHHHHHHHHHHHHTTTCEEESSCCE
T ss_pred hcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhc--CC-cceecCC-HHHHHHHHHHHHHHCCCEEEcCCeE
Confidence 877777778888888777777888888887666555544321 22 3456666 7899999999999999999999999
Q ss_pred eEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 296 QKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 296 ~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
++|..+ ++.+ | +.+|++++||+||+|+|++.+..|
T Consensus 213 ~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~l 247 (421)
T 3nrn_A 213 VEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRETVKL 247 (421)
T ss_dssp EEEETT-TTEE--E-ETTCCEEECSEEEECSCHHHHHHH
T ss_pred EEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHHHHHh
Confidence 999874 4433 5 456669999999999999987666
No 7
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.91 E-value=7.8e-23 Score=191.08 Aligned_cols=256 Identities=18% Similarity=0.281 Sum_probs=169.9
Q ss_pred CCCCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCCC
Q 019346 52 PRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIN 131 (342)
Q Consensus 52 ~~~~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~ 131 (342)
.+....+||+|||||++||+||+.|+++|++|+|||+++.+||++.+... .+..+|.|++++...++.+.++++++|++
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~-~g~~~~~g~~~~~~~~~~~~~~~~~~gl~ 89 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHAL-AGYLVEQGPNSFLDREPATRALAAALNLE 89 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEE-TTEEEESSCCCEETTCHHHHHHHHHTTCG
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeecc-CCeeeecChhhhhhhhHHHHHHHHHcCCc
Confidence 34556789999999999999999999999999999999999999998764 67899999999988788899999999987
Q ss_pred ccccccc---cceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCC
Q 019346 132 DRLQWKE---HSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLT 208 (342)
Q Consensus 132 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (342)
....... ....+... +.. +.+ +.. ...++. .....+.+..+......... ....+..+
T Consensus 90 ~~~~~~~~~~~~~~~~~~---g~~--~~~----p~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~s 150 (478)
T 2ivd_A 90 GRIRAADPAAKRRYVYTR---GRL--RSV----PAS---PPAFLA-SDILPLGARLRVAGELFSRR------APEGVDES 150 (478)
T ss_dssp GGEECSCSSCCCEEEEET---TEE--EEC----CCS---HHHHHT-CSSSCHHHHHHHHGGGGCCC------CCTTCCCB
T ss_pred ceeeecCccccceEEEEC---CEE--EEC----CCC---HHHhcc-CCCCCHHHHHHHhhhhhcCC------CCCCCCCC
Confidence 5433221 01111111 111 011 111 122222 12233333333332221110 01235689
Q ss_pred HHHHHHHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhhh----------------------hccC----cc
Q 019346 209 VQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ----------------------EKHG----SK 262 (342)
Q Consensus 209 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~g----~~ 262 (342)
+.+|+++. +...+.+.++.++....+..++++++....+..+..+.. ...+ ..
T Consensus 151 ~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (478)
T 2ivd_A 151 LAAFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGA 229 (478)
T ss_dssp HHHHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCC
T ss_pred HHHHHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCccccccccccc
Confidence 99999886 677888888888888888888888887655433322110 0011 34
Q ss_pred eeecCCCCCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEe---cCCcEEEcCEEEEccCHHhhhcC
Q 019346 263 MAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 263 ~~~~~g~~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t---~~G~~i~a~~VI~At~~~~~~~L 334 (342)
+.++.++ +..+++.|.+.+ |++|+++++|++|..++++. .|++ .+|++++||+||+|+|++.+..|
T Consensus 230 ~~~~~gG-~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~--~v~~~~~~~g~~~~ad~vV~a~~~~~~~~l 298 (478)
T 2ivd_A 230 LSTFDGG-LQVLIDALAASL---GDAAHVGARVEGLAREDGGW--RLIIEEHGRRAELSVAQVVLAAPAHATAKL 298 (478)
T ss_dssp EEEETTC-THHHHHHHHHHH---GGGEESSEEEEEEECC--CC--EEEEEETTEEEEEECSEEEECSCHHHHHHH
T ss_pred EEEECCC-HHHHHHHHHHHh---hhhEEcCCEEEEEEecCCeE--EEEEeecCCCceEEcCEEEECCCHHHHHHH
Confidence 5566665 678888888776 67999999999999855553 5776 67778999999999999987655
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.90 E-value=2.4e-22 Score=188.63 Aligned_cols=261 Identities=16% Similarity=0.096 Sum_probs=169.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCCCccccc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQW 136 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~~~~~~ 136 (342)
++||+|||||++||+||+.|++.|++|+|||+++++||++.+.. ..+..+|.|++++.+.++++.++++++|+......
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~~~ 117 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSN-IDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSP 117 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEE-ETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecc-cCCeeecCCCeEecCccHHHHHHHHHcCCcceeec
Confidence 47999999999999999999999999999999999999998876 46889999999998888899999999998543322
Q ss_pred cc----cceeeeccCCCCCccccCCCCCCCCchhhHH----HHHhcCCCCChhHHHHhhhccch--hhhcCchhhhhccC
Q 019346 137 KE----HSMIFAMPNKPGEFSRFDFPEVLPAPLNGIL----AILRNNEMLTWPEKVKFAIGLLP--AIIGGQAYVEAQDG 206 (342)
Q Consensus 137 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 206 (342)
.. ....+......+....+ +. ......+. .+...... ....+.. ............+.
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~~--~~--~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 185 (495)
T 2vvm_A 118 SFNFSRGVNHFQLRTNPTTSTYM--TH--EAEDELLRSALHKFTNVDGT--------NGRTVLPFPHDMFYVPEFRKYDE 185 (495)
T ss_dssp SCCCSSSCCEEEEESSTTCCEEE--CH--HHHHHHHHHHHHHHHCSSSS--------TTTTTCSCTTSTTSSTTHHHHHT
T ss_pred ccccCCCceEEEecCCCCceeec--CH--HHHHHHHHHHHHHHHccchh--------hhhhcCCCCCCcccCcchhhhhh
Confidence 11 11111111100111000 00 00000011 11110000 0000000 00000111233456
Q ss_pred CCHHHHHHHcC--CChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhhh----hccCcceeecCCCCCcccchHHHH
Q 019346 207 LTVQEWMRKQG--VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ----EKHGSKMAFLDGNPPERLCLPIVE 280 (342)
Q Consensus 207 ~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~g~~~~~l~~~l~~ 280 (342)
.++.+|+++.+ .+.. ...++..+....+..+++++++...+..+..... .........+.++ +..+++.|.+
T Consensus 186 ~s~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~ 263 (495)
T 2vvm_A 186 MSYSERIDQIRDELSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDG-QSAFARRFWE 263 (495)
T ss_dssp SBHHHHHHHHGGGCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTC-HHHHHHHHHH
T ss_pred hhHHHHHHHhhccCCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCC-HHHHHHHHHH
Confidence 89999999876 5544 4567777777777788888888776554322100 0001112234444 6789999999
Q ss_pred HHHhcC-cEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 281 HIQSLG-GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 281 ~l~~~G-v~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
.+.+.| ++|+++++|++|+.++++ + .|++.+|++++||+||+|+|+..+..|
T Consensus 264 ~l~~~g~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~i 316 (495)
T 2vvm_A 264 EAAGTGRLGYVFGCPVRSVVNERDA-A-RVTARDGREFVAKRVVCTIPLNVLSTI 316 (495)
T ss_dssp HHHTTTCEEEESSCCEEEEEECSSS-E-EEEETTCCEEEEEEEEECCCGGGGGGS
T ss_pred HhhhcCceEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCHHHHhhe
Confidence 999998 999999999999975544 3 588888888999999999999988777
No 9
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.89 E-value=1.7e-22 Score=189.93 Aligned_cols=257 Identities=21% Similarity=0.271 Sum_probs=132.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCCCcc--cc
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR--LQ 135 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~~~--~~ 135 (342)
++|||||||++||+||++|+++|++|+|||+++++||++.++. .+|+.+|.|+|++... ..+.++++.+|.+.. +.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~-~~G~~~D~G~~~~~~~-~~~~~l~~~~g~~~~~~~~ 79 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQGFTFDAGPTVITDP-SAIEELFALAGKQLKEYVE 79 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEE-ETTEEEECSCCCBSCT-HHHHHHHHTTTCCGGGTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEE-eCCEEEecCceeecCc-hhHHHHHHHhcchhhhcee
Confidence 5899999999999999999999999999999999999999876 4789999999987632 235677777775432 22
Q ss_pred ccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccC---------
Q 019346 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDG--------- 206 (342)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 206 (342)
+......+.....++.. +.+..........+..+... ....+.........+.. ...........
T Consensus 80 ~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~l~~~~p~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 153 (501)
T 4dgk_A 80 LLPVTPFYRLCWESGKV--FNYDNDQTRLEAQIQQFNPR-DVEGYRQFLDYSRAVFK---EGYLKLGTVPFLSFRDMLRA 153 (501)
T ss_dssp EEEESSSEEEEETTSCE--EEECSCHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHTS---SSCC--CCCCCCCHHHHHHS
T ss_pred eEecCcceEEEcCCCCE--EEeeccHHHHHHHHhhcCcc-ccchhhhHHHHHHHhhh---hhhhhccccccchhhhhhhh
Confidence 22211111111111111 11111100000011110000 00000000000000000 00000000001
Q ss_pred ----------CCHHHHHHHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhhhhccCcceeecCCCCCcccch
Q 019346 207 ----------LTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCL 276 (342)
Q Consensus 207 ----------~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~ 276 (342)
.++.+++.++ +.++....++.... ......+...+..+.+ ...+....| ..++.|| +..+++
T Consensus 154 ~~~~~~l~~~~~~~~~~~~~-~~~~~l~~~l~~~~-~~~g~~p~~~~~~~~~---~~~~~~~~G--~~~p~GG-~~~l~~ 225 (501)
T 4dgk_A 154 APQLAKLQAWRSVYSKVASY-IEDEHLRQAFSFHS-LLVGGNPFATSSIYTL---IHALEREWG--VWFPRGG-TGALVQ 225 (501)
T ss_dssp GGGTTTSHHHHHHHHHHHTT-CCCHHHHHHHHHHH-HHHHSCC--CCCTHHH---HHHHHSCCC--EEEETTH-HHHHHH
T ss_pred hhhhhhhhhcccHHHHHHHH-hccHHHHhhhhhhh-cccCCCcchhhhhhhh---hhhhhccCC--eEEeCCC-CcchHH
Confidence 1233444443 23333333322211 1112233332222221 111222222 3467776 789999
Q ss_pred HHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 277 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 277 ~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
.|.+.++++|++|++|++|++|.. +++.+.+|++.+|+++.||.||++++++.+
T Consensus 226 aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~ 279 (501)
T 4dgk_A 226 GMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVVHT 279 (501)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC----
T ss_pred HHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHHHH
Confidence 999999999999999999999998 466677899999999999999998877644
No 10
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.89 E-value=1.6e-22 Score=188.76 Aligned_cols=262 Identities=20% Similarity=0.263 Sum_probs=169.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcC--CceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCCCccc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g--~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~~~~ 134 (342)
.+||+|||||++|++||++|++.| ++|+|||+++.+||++.+... .++.++.|++.+...++.+.++++++|++...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYRE-DGFTIERGPDSYVARKHILTDLIEAIGLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECS-TTCCEESSCCCEETTSTHHHHHHHHTTCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEee-CCEEEecCchhhhcccHHHHHHHHHcCCcceE
Confidence 579999999999999999999999 999999999999999888764 78899999999988889999999999998654
Q ss_pred cccccc-eeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCHHHHH
Q 019346 135 QWKEHS-MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 213 (342)
Q Consensus 135 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 213 (342)
...... ..... .+....+........+. .+..+. .........+. ......... ........+..++.+|+
T Consensus 83 ~~~~~~~~~~~~---~g~~~~~p~~~~~~~p~-~~~~~~-~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~s~~~~l 154 (475)
T 3lov_A 83 VRNNTSQAFILD---TGGLHPIPKGAVMGIPT-DLDLFR-QTTLLTEEEKQ-EVADLLLHP--SDSLRIPEQDIPLGEYL 154 (475)
T ss_dssp EECCCCCEEEEE---TTEEEECCSSEETTEES-CHHHHT-TCSSSCHHHHH-HHHHHHHSC--CTTCCCCSSCCBHHHHH
T ss_pred eecCCCceEEEE---CCEEEECCCcccccCcC-chHHHh-hccCCChhHHH-HhhCcccCC--cccccCCCCCcCHHHHH
Confidence 432111 11111 11111111000000000 011222 12233333332 211111100 00000123558899999
Q ss_pred HHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHh-------h----hhc--------------cCcceeecCC
Q 019346 214 RKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------L----QEK--------------HGSKMAFLDG 268 (342)
Q Consensus 214 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~--------------~g~~~~~~~g 268 (342)
++. +...+.+.++.++....+..++++++....+..+..+ + ... .+..+.++.+
T Consensus 155 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (475)
T 3lov_A 155 RPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLET 233 (475)
T ss_dssp HHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETT
T ss_pred HHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCC
Confidence 885 6677888889999888888888887754322222110 0 000 1234455555
Q ss_pred CCCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 269 NPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 269 ~~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
+ +..+++.|.+.+.+ ++|+++++|++|+.++++ +.|+|.+| ++.||+||+|+|++.+..|
T Consensus 234 G-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~ad~vV~a~p~~~~~~l 293 (475)
T 3lov_A 234 G-LESLIERLEEVLER--SEIRLETPLLAISREDGR--YRLKTDHG-PEYADYVLLTIPHPQVVQL 293 (475)
T ss_dssp C-HHHHHHHHHHHCSS--CEEESSCCCCEEEEETTE--EEEECTTC-CEEESEEEECSCHHHHHHH
T ss_pred h-HHHHHHHHHhhccC--CEEEcCCeeeEEEEeCCE--EEEEECCC-eEECCEEEECCCHHHHHHH
Confidence 5 56777777766644 799999999999985554 35889999 8999999999999987665
No 11
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.89 E-value=9.6e-22 Score=180.60 Aligned_cols=262 Identities=15% Similarity=0.112 Sum_probs=172.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccC-------------------CCceeecceeEe
Q 019346 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG-------------------DGDWYETGLHIF 114 (342)
Q Consensus 54 ~~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~-------------------~~~~~~~G~~~~ 114 (342)
.+..+||+|||+|++|+++|+.|++.|++|+|+|+++..||.+.+.... .++.+|++++.+
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l 96 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFI 96 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEe
Confidence 3467899999999999999999999999999999999999998875421 135678887766
Q ss_pred cCCcccHHHHHHHcCCCccccccccceeeeccCC-------CCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhh
Q 019346 115 FGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNK-------PGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFA 187 (342)
Q Consensus 115 ~~~~~~~~~l~~~~gi~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (342)
. ....+.+++.+.|+...++|......+..... .+... . ++. . ....+. ...+.+.++.++.
T Consensus 97 ~-~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~--~----VPs--s-~~e~~~-~~lLs~~eK~~l~ 165 (475)
T 3p1w_A 97 L-VGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIH--K----VPA--T-DMEALV-SPLLSLMEKNRCK 165 (475)
T ss_dssp E-TTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEE--E----CCC--S-HHHHHT-CTTSCHHHHHHHH
T ss_pred e-cCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceE--e----CCC--C-HHHHhh-ccCCCHHHHHHHH
Confidence 4 44567888899999988887776655433211 11110 0 111 1 233333 3566666665543
Q ss_pred hccchhhhcCc---h--hh-hhccCCCHHHHHHHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhh---hhc
Q 019346 188 IGLLPAIIGGQ---A--YV-EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL---QEK 258 (342)
Q Consensus 188 ~~~~~~~~~~~---~--~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 258 (342)
.-+.. ..... + +. .+.+..++.+|+++.+++..+.+.++..+. .....+..+.++...+..+..+. ...
T Consensus 166 kFL~~-l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~ala-L~~~~~~~~~~a~~~l~ri~~y~~Sl~~y 243 (475)
T 3p1w_A 166 NFYQY-VSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVA-LYLNDDYLKQPAYLTLERIKLYMQSISAF 243 (475)
T ss_dssp HHHHH-HHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTS-CCSSSGGGGSBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHH-hhcCCCcccCCHHHHHHHHHHHHHHHhhc
Confidence 33222 21111 0 00 122457899999999988776653322211 11111122234444444333332 112
Q ss_pred cCcceeecCCCCCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 259 HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 259 ~g~~~~~~~g~~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
.+..+.|+.|| +..+++.|.+.+.++|++|+++++|++|..++++.+++|++.+|++++||+||+|++.+
T Consensus 244 g~s~~~yp~gG-~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 244 GKSPFIYPLYG-LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp SSCSEEEETTC-TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred CCCceEEECCC-HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 34567788888 78999999999999999999999999999855677889999999889999999998655
No 12
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.89 E-value=6.2e-22 Score=183.75 Aligned_cols=261 Identities=18% Similarity=0.203 Sum_probs=163.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCCCccccc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQW 136 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~~~~~~ 136 (342)
++||+|||||++||+||+.|++.|++|+|||+++.+||++.+... .+..+|.|++++......+.++++++|++....+
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI-DGAVLEIGGQWVSPDQTALISLLDELGLKTFERY 83 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEE-TTEEEECSCCCBCTTCHHHHHHHHHTTCCEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceecccc-CCceeccCCeEecCccHHHHHHHHHcCCcccccc
Confidence 579999999999999999999999999999999999999987664 6788999999988777788899999998764433
Q ss_pred cccceeeeccCCCCCccccCCCCCCC-CchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCHHHHHHH
Q 019346 137 KEHSMIFAMPNKPGEFSRFDFPEVLP-APLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (342)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 215 (342)
.....++... .+.... +....+ ........+.... .....+........ ..........+..++.+|+++
T Consensus 84 ~~~~~~~~~~--~g~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~s~~~~l~~ 154 (453)
T 2yg5_A 84 REGESVYISS--AGERTR--YTGDSFPTNETTKKEMDRLI---DEMDDLAAQIGAEE--PWAHPLARDLDTVSFKQWLIN 154 (453)
T ss_dssp CCSEEEEECT--TSCEEE--ECSSSCSCCHHHHHHHHHHH---HHHHHHHHHHCSSC--GGGSTTHHHHHSSBHHHHHHH
T ss_pred cCCCEEEEeC--CCceee--ccCCCCCCChhhHHHHHHHH---HHHHHHHhhcCCCC--CCCCcchhhhhhccHHHHHHh
Confidence 3322222221 011111 111111 1000111111000 00011100000000 000011123456899999999
Q ss_pred cCCChhHHHHHHHHHHhhccCCCCC-cchHHHHHHHHHHhhh-----hccCcceeecCCCCCcccchHHHHHHHhcCcEE
Q 019346 216 QGVPDRVTTEVFIAMSKALNFINPD-ELSMQCILIALNRFLQ-----EKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 289 (342)
Q Consensus 216 ~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~g~~~~~~~g~~~~~l~~~l~~~l~~~Gv~i 289 (342)
.+... ....++..+....+..+++ +++....+..+...-. ...+..+.++.|| +..+++.|.+.+ |++|
T Consensus 155 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~~l---g~~i 229 (453)
T 2yg5_A 155 QSDDA-EARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGG-MQQVSIRMAEAL---GDDV 229 (453)
T ss_dssp HCSCH-HHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTC-THHHHHHHHHHH---GGGE
T ss_pred hcCCH-HHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCC-hHHHHHHHHHhc---CCcE
Confidence 86544 4555777776666677888 8888776544332100 0011223455555 667888877665 7899
Q ss_pred EecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 290 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 290 ~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
++|++|++|..++++. +.|++ +|+++.||+||+|+|++.+..|
T Consensus 230 ~~~~~V~~i~~~~~~~-v~v~~-~~~~~~ad~VI~a~p~~~~~~l 272 (453)
T 2yg5_A 230 FLNAPVRTVKWNESGA-TVLAD-GDIRVEASRVILAVPPNLYSRI 272 (453)
T ss_dssp ECSCCEEEEEEETTEE-EEEET-TTEEEEEEEEEECSCGGGGGGS
T ss_pred EcCCceEEEEEeCCce-EEEEE-CCeEEEcCEEEEcCCHHHHhcC
Confidence 9999999998754431 34666 6669999999999999988776
No 13
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.88 E-value=2.2e-22 Score=189.29 Aligned_cols=260 Identities=19% Similarity=0.243 Sum_probs=163.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCCCcccc
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQ 135 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~~~~~ 135 (342)
..+||+|||||++||+||+.|++.|++|+|||+++.+||++.+... .++.+|.|++++...++.+.++++++|+.....
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~~~ 90 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQ-DGLIWDEGANTMTESEGDVTFLIDSLGLREKQQ 90 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEE-TTEEEESSCCCBCCCSHHHHHHHHHTTCGGGEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecc-CCeEEecCCcccccCcHHHHHHHHHcCCcccce
Confidence 4679999999999999999999999999999999999999988663 678899999999877888999999999876543
Q ss_pred ccccce-eeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCHHHHHH
Q 019346 136 WKEHSM-IFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (342)
Q Consensus 136 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 214 (342)
+..... .+.. .++... . .+.. ...+... ....+..+++........... .......+..++.+|++
T Consensus 91 ~~~~~~~~~~~--~~g~~~--~----~p~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~l~ 157 (504)
T 1sez_A 91 FPLSQNKRYIA--RNGTPV--L----LPSN---PIDLIKS-NFLSTGSKLQMLLEPILWKNK-KLSQVSDSHESVSGFFQ 157 (504)
T ss_dssp CCSSCCCEEEE--SSSSEE--E----CCSS---HHHHHHS-SSSCHHHHHHHHTHHHHC-----------CCCBHHHHHH
T ss_pred eccCCCceEEE--ECCeEE--E----CCCC---HHHHhcc-ccCCHHHHHHHhHhhhccCcc-cccccCCCCccHHHHHH
Confidence 322110 1100 011110 0 1111 1111111 223333333322211100000 00001124589999998
Q ss_pred HcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHh---------------hhhc---------------cCccee
Q 019346 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF---------------LQEK---------------HGSKMA 264 (342)
Q Consensus 215 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~---------------~g~~~~ 264 (342)
+. +...+.+.++.++....+..+++++++...+..+... +... ......
T Consensus 158 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (504)
T 1sez_A 158 RH-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSF 236 (504)
T ss_dssp HH-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCB
T ss_pred HH-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceE
Confidence 86 6778888888888888888888888776543222111 1000 011234
Q ss_pred ecCCCCCcccchHHHHHHHhcC-cEEEecceeeEEEEcCCCC----EEEEEe--cCC---cEEEcCEEEEccCHHhhhcC
Q 019346 265 FLDGNPPERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGT----VKNFLL--TNG---NVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 265 ~~~g~~~~~l~~~l~~~l~~~G-v~i~~~t~V~~I~~~~~g~----~~~v~t--~~G---~~i~a~~VI~At~~~~~~~L 334 (342)
++.|| ++.|++.|.+.+ + ++|++|++|++|..++++. .+.|++ .+| +++.||+||+|+|+..+..|
T Consensus 237 ~~~GG-~~~l~~~l~~~l---~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~l 312 (504)
T 1sez_A 237 SFLGG-MQTLTDAICKDL---REDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSM 312 (504)
T ss_dssp EETTC-THHHHHHHHTTS---CTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTS
T ss_pred eeCcH-HHHHHHHHHhhc---ccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHH
Confidence 44555 566666666543 4 6899999999999865552 124544 356 57899999999999988776
No 14
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.86 E-value=1.2e-19 Score=167.24 Aligned_cols=254 Identities=19% Similarity=0.251 Sum_probs=151.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeec--cCCCceeecceeEecCC-cccHHHHHHHcCCCccc
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWK--DGDGDWYETGLHIFFGA-YPNIQNLFGELGINDRL 134 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~--~~~~~~~~~G~~~~~~~-~~~~~~l~~~~gi~~~~ 134 (342)
+||+|||||++|++||+.|+++|++|+|||+++++||++.+.. +.++..++.|++++... .+.+.++++++|++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 81 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTAA 81 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeeee
Confidence 6999999999999999999999999999999999999998654 23488899999998877 77888899999987543
Q ss_pred cccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCHHHHHH
Q 019346 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (342)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 214 (342)
........+.. ..+.+. ...+........+... ..........+........+.....+ .++.++++
T Consensus 82 ~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~d-~s~~~~l~ 148 (431)
T 3k7m_X 82 ASEFTSFRHRL--GPTAVD-----QAFPIPGSEAVAVEAA-----TYTLLRDAHRIDLEKGLENQDLEDLD-IPLNEYVD 148 (431)
T ss_dssp CCCCCEECCBS--CTTCCS-----SSSCCCGGGHHHHHHH-----HHHHHHHHTTCCTTTCTTSSSCGGGC-SBHHHHHH
T ss_pred cCCCCcEEEEe--cCCeec-----CCCCCCHHHHHHHHHH-----HHHHHHHHHhcCCCCCccCcchhhhc-CCHHHHHH
Confidence 22221111100 001110 0000001111111000 00001111111100000011122334 78899998
Q ss_pred HcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhh---hh-ccCcceeecCCCCCcccchHHHHHHHh-cCcEE
Q 019346 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL---QE-KHGSKMAFLDGNPPERLCLPIVEHIQS-LGGEV 289 (342)
Q Consensus 215 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~g~~~~~~~g~~~~~l~~~l~~~l~~-~Gv~i 289 (342)
..+..... ..++..+.........++++.......+...- .. ...... .+.++ ...+.+.+.+ .| +|
T Consensus 149 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g-----~~~l~~~~~~~~g-~i 220 (431)
T 3k7m_X 149 KLDLPPVS-RQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNG-----SADLVDAMSQEIP-EI 220 (431)
T ss_dssp HHTCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTC-----THHHHHHHHTTCS-CE
T ss_pred hcCCCHHH-HHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCc-----HHHHHHHHHhhCC-ce
Confidence 87665443 33455555556667777777766554433210 00 001111 22222 2344444444 46 99
Q ss_pred EecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 290 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 290 ~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
++|++|++|+.++++ + .|+|.+|++++||+||+|+|+..+..+
T Consensus 221 ~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vi~a~~~~~l~~i 263 (431)
T 3k7m_X 221 RLQTVVTGIDQSGDV-V-NVTVKDGHAFQAHSVIVATPMNTWRRI 263 (431)
T ss_dssp ESSCCEEEEECSSSS-E-EEEETTSCCEEEEEEEECSCGGGGGGS
T ss_pred EeCCEEEEEEEcCCe-E-EEEECCCCEEEeCEEEEecCcchHhhe
Confidence 999999999875554 3 588889977999999999999888777
No 15
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.85 E-value=1.6e-20 Score=173.88 Aligned_cols=258 Identities=14% Similarity=0.124 Sum_probs=147.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCc---------------eeecceeEecC---
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGD---------------WYETGLHIFFG--- 116 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~---------------~~~~G~~~~~~--- 116 (342)
+.++||||||||++||+||+.|+++|++|+|||+++.+||++.++....++ .++.|.++..+
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P 88 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIP 88 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeecccc
Confidence 356899999999999999999999999999999999999999885421101 13444444332
Q ss_pred ----CcccHHHHHHHcCCCccccccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHH---HHhhhc
Q 019346 117 ----AYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEK---VKFAIG 189 (342)
Q Consensus 117 ----~~~~~~~l~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 189 (342)
....+.++++++|+...+.+......+... ++.. +.++. . ....+.. ......++ .++...
T Consensus 89 ~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~--~g~~--~~~p~----~--~~~~~~~--~l~~~~~~~~~~~~~~~ 156 (453)
T 2bcg_G 89 KFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK--QGKI--YKVPA----N--EIEAISS--PLMGIFEKRRMKKFLEW 156 (453)
T ss_dssp CBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE--TTEE--EECCS----S--HHHHHHC--TTSCHHHHHHHHHHHHH
T ss_pred ceeecCcHHHHHHHhcCCccceEEEEccceeEEe--CCeE--EECCC----C--hHHHHhh--hccchhhHHHHHHHHHH
Confidence 235678999999987554443332222211 1111 11111 1 0111110 00111110 011100
Q ss_pred cchhhhcCchh---hhhccCCCHHHHHHHcCCChhHHHHHHHHHHhhccCCCC---CcchHHHHHHHHHHhh---hhccC
Q 019346 190 LLPAIIGGQAY---VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINP---DELSMQCILIALNRFL---QEKHG 260 (342)
Q Consensus 190 ~~~~~~~~~~~---~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~g 260 (342)
+.... ...+. .......++.+|+++++....+.+ ++.. ....... ...+....+..+..++ .....
T Consensus 157 ~~~~~-~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~---~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~ 231 (453)
T 2bcg_G 157 ISSYK-EDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKE-FIGH---AMALWTNDDYLQQPARPSFERILLYCQSVARYGK 231 (453)
T ss_dssp HHHCB-TTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHH-HHHH---HTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHhc-cCCchhhhccccccCCHHHHHHHhCCCHHHHH-HHHH---HHHhccCccccCCchHHHHHHHHHHHHHHHhhcC
Confidence 00000 00000 001346789999999877665443 2221 1111110 0112222221111111 11123
Q ss_pred cceeecCCCCCcccchHHHHHHHhcCcEEEecceeeEEEEcC-CCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 261 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 261 ~~~~~~~g~~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~-~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
..|.++.|| +..+++.|.+.++++|++|+++++|++|..+. ++.+++|++ +|+++.||+||+|++++..
T Consensus 232 ~~~~~p~gG-~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 232 SPYLYPMYG-LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp CSEEEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred CceEeeCCC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 456677776 78999999999999999999999999998852 566667777 4779999999999998854
No 16
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.84 E-value=3e-20 Score=170.88 Aligned_cols=253 Identities=19% Similarity=0.219 Sum_probs=150.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcC-CceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCCCccc
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g-~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~~~~ 134 (342)
.++||+|||||++||+||+.|++.| ++|+|+|+++++||++.+... .|..+|.|++++...++.+.++++++|++...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~-~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~~~ 83 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNY-HGRRYEMGAIMGVPSYDTIQEIMDRTGDKVDG 83 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEE-TTEECCSSCCCBCTTCHHHHHHHHHHCCCCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCC-CCcccccCceeecCCcHHHHHHHHHhCCcccc
Confidence 5679999999999999999999999 899999999999999988763 57889999999887788899999999986432
Q ss_pred cccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcC--chhhhhccCCCHHHH
Q 019346 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGG--QAYVEAQDGLTVQEW 212 (342)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 212 (342)
. .....+. ..++... .....+.....+..... ............+... ..........++.+|
T Consensus 84 ~--~~~~~~~--~~~g~~~---~~~~~~~~~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 148 (424)
T 2b9w_A 84 P--KLRREFL--HEDGEIY---VPEKDPVRGPQVMAAVQ--------KLGQLLATKYQGYDANGHYNKVHEDLMLPFDEF 148 (424)
T ss_dssp C--CCCEEEE--CTTSCEE---CGGGCTTHHHHHHHHHH--------HHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHH
T ss_pred c--cccceeE--cCCCCEe---ccccCcccchhHHHHHH--------HHHHHHhhhhhhcccccchhhhhhhhccCHHHH
Confidence 1 1111111 1111110 00000000000000000 0000000000000000 000112234789999
Q ss_pred HHHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHH--HhhhhccCcceeecCCCCCcccchHHHHHHHhcCcEEE
Q 019346 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALN--RFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVR 290 (342)
Q Consensus 213 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~Gv~i~ 290 (342)
+++.+.+ .+.+.+..++....+ .++.+.++.+.+.++. ..+....+..+. +.++ ..++++.|.+.+ +.+|+
T Consensus 149 l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~g-~~~l~~~l~~~l---~~~v~ 221 (424)
T 2b9w_A 149 LALNGCE-AARDLWINPFTAFGY-GHFDNVPAAYVLKYLDFVTMMSFAKGDLWT-WADG-TQAMFEHLNATL---EHPAE 221 (424)
T ss_dssp HHHTTCG-GGHHHHTTTTCCCCC-CCTTTSBHHHHHHHSCHHHHHHHHHTCCBC-CTTC-HHHHHHHHHHHS---SSCCB
T ss_pred HHhhCcH-HHHHHHHHHHHhhcc-CChHhcCHHHHHHhhhHhhhhcccCCceEE-eCCh-HHHHHHHHHHhh---cceEE
Confidence 9998765 344444444433333 3566777766533221 111112233333 3333 456666665544 56789
Q ss_pred ecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 291 LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 291 ~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
++++|++|..++++ + .|++.+| +++||+||+|+|++.+..+
T Consensus 222 ~~~~V~~i~~~~~~-v-~v~~~~g-~~~ad~Vv~a~~~~~~~~~ 262 (424)
T 2b9w_A 222 RNVDITRITREDGK-V-HIHTTDW-DRESDVLVLTVPLEKFLDY 262 (424)
T ss_dssp CSCCEEEEECCTTC-E-EEEESSC-EEEESEEEECSCHHHHTTS
T ss_pred cCCEEEEEEEECCE-E-EEEECCC-eEEcCEEEECCCHHHHhhc
Confidence 99999999875444 4 4888888 6999999999999976554
No 17
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.83 E-value=1.9e-19 Score=165.76 Aligned_cols=258 Identities=13% Similarity=0.104 Sum_probs=151.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeec-cC-------------------CCceeecceeEec
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWK-DG-------------------DGDWYETGLHIFF 115 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~-~~-------------------~~~~~~~G~~~~~ 115 (342)
.++||+|||||++|+++|..|++.|++|+|+|+++.+||++.++. .. .++.++.|++++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~ 84 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM 84 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee
Confidence 468999999999999999999999999999999999999998866 10 3456677777665
Q ss_pred CCcccHHHHHHHcCCCccccccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhH---HHHhhhccch
Q 019346 116 GAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPE---KVKFAIGLLP 192 (342)
Q Consensus 116 ~~~~~~~~l~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 192 (342)
.. ..+.++++++|+...+.+......+... ++.. +.++. .. ...+.. ......+ ..++...+..
T Consensus 85 ~~-~~l~~ll~~lgl~~~l~~~~~~~~~~~~--~g~~--~~~p~----~~--~~~~~~--~l~~~~~~~~~~~~~~~~~~ 151 (433)
T 1d5t_A 85 AN-GQLVKMLLYTEVTRYLDFKVVEGSFVYK--GGKI--YKVPS----TE--TEALAS--NLMGMFEKRRFRKFLVFVAN 151 (433)
T ss_dssp TT-SHHHHHHHHHTGGGGCCEEECCEEEEEE--TTEE--EECCC----SH--HHHHHC--SSSCHHHHHHHHHHHHHHHH
T ss_pred cc-chHHHHHHHcCCccceEEEEeCceEEee--CCEE--EECCC----CH--HHHhhC--cccChhhHHHHHHHHHHHHh
Confidence 43 3577899999987655444332222211 1111 11111 10 001110 0011100 0011110000
Q ss_pred hhhcCchh---hhhccCCCHHHHHHHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhhhh--cc-Ccceeec
Q 019346 193 AIIGGQAY---VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE--KH-GSKMAFL 266 (342)
Q Consensus 193 ~~~~~~~~---~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-g~~~~~~ 266 (342)
+....+. .......++.+|+++.+....+.+ ++..........++.+.+....+..+..+... .. ...+.++
T Consensus 152 -~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p 229 (433)
T 1d5t_A 152 -FDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVID-FTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYP 229 (433)
T ss_dssp -CCTTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEE
T ss_pred -hcccCchhccccccccCCHHHHHHHcCCCHHHHH-HHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEe
Confidence 0000000 012355789999999877655433 22221111111122233333222222222221 12 2346677
Q ss_pred CCCCCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 267 DGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 267 ~g~~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
.|| +..+++.|.+.+.+.|++|+++++|++|..+ ++.+..|++ +|++++||+||+|++++..
T Consensus 230 ~gG-~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~-~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 230 LYG-LGELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKS-EGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp TTC-TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEE-TTEEEECSEEEECGGGCGG
T ss_pred CcC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEEE-CCeEEECCEEEECCCCCcc
Confidence 777 7899999999999999999999999999874 455555654 6779999999999998854
No 18
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.83 E-value=2.4e-20 Score=174.01 Aligned_cols=249 Identities=18% Similarity=0.249 Sum_probs=158.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcC-CceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCCCcc
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g-~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~~~ 133 (342)
...+||+|||||++|+++|+.|+++| .+|+|+|+++.+||.+.+....+|+.++.|++.+...++.+.++++++. +..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~-~~~ 85 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAV-QGW 85 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHC-SCE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHh-hhh
Confidence 35689999999999999999999998 7999999999999999886456789999999999888888889998875 221
Q ss_pred ccccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCHHHHH
Q 019346 134 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 213 (342)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 213 (342)
........++. .+.+..+.+...+ ..+...........+..... .....+..++.+|+
T Consensus 86 ~~~~~~~~~~~----~g~~~~~P~~~~~--------------~~l~~~~~~~~~~~ll~~~~----~~~~~~~~s~~e~~ 143 (484)
T 4dsg_A 86 NVLQRESWVWV----RGRWVPYPFQNNI--------------HRLPEQDRKRCLDELVRSHA----RTYTEPPNNFEESF 143 (484)
T ss_dssp EEEECCCEEEE----TTEEEESSGGGCG--------------GGSCHHHHHHHHHHHHHHHH----CCCSSCCSSHHHHH
T ss_pred hhccCceEEEE----CCEEEEeCccchh--------------hhCCHHHHHHHHHHHHHHHh----ccCCCCCCCHHHHH
Confidence 11111111111 1111111100000 00011111111111111100 01123558899999
Q ss_pred HHcCCChhHHHHHHHHHHhhccCCCCCcchHHHH---------HHHHHHhhhhcc------CcceeecC-CCCCcccchH
Q 019346 214 RKQGVPDRVTTEVFIAMSKALNFINPDELSMQCI---------LIALNRFLQEKH------GSKMAFLD-GNPPERLCLP 277 (342)
Q Consensus 214 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~------g~~~~~~~-g~~~~~l~~~ 277 (342)
.+. +...+.+.++.++....+..++++++..+. ...+...+.... ...+.|+. || +..+++.
T Consensus 144 ~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG-~~~l~~~ 221 (484)
T 4dsg_A 144 TRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGG-TGIIYQA 221 (484)
T ss_dssp HHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSC-THHHHHH
T ss_pred HHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCC-HHHHHHH
Confidence 886 556666777788888888888877765331 111222222111 22234443 44 7888888
Q ss_pred HHHHHHhcCcEEEec--ceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 278 IVEHIQSLGGEVRLN--SRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 278 l~~~l~~~Gv~i~~~--t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
|++.+.+. +|+++ ++|++|..+ ++ .|++.+|+++.||+||+|+|++.+..|
T Consensus 222 la~~l~~~--~i~~~~~~~V~~I~~~-~~---~v~~~~G~~~~ad~VI~a~p~~~~~~l 274 (484)
T 4dsg_A 222 IKEKLPSE--KLTFNSGFQAIAIDAD-AK---TITFSNGEVVSYDYLISTVPFDNLLRM 274 (484)
T ss_dssp HHHHSCGG--GEEECGGGCEEEEETT-TT---EEEETTSCEEECSEEEECSCHHHHHHH
T ss_pred HHhhhhhC--eEEECCCceeEEEEec-CC---EEEECCCCEEECCEEEECCCHHHHHHH
Confidence 88877553 78889 569999874 33 256688888999999999999987655
No 19
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.79 E-value=5.2e-19 Score=166.65 Aligned_cols=239 Identities=18% Similarity=0.212 Sum_probs=128.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcC-CceEEEecCCCCCcceeeeccCCCceeecceeEecCCc-ccHHHHHHHcCCCcc
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAY-PNIQNLFGELGINDR 133 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g-~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~l~~~~gi~~~ 133 (342)
..+||+|||||++||+||+.|++.| ++|+|||+++++||++.+.....|..+|.|++++.+.. ..+..++.++++...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~~ 86 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLNDG 86 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHHC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCCc
Confidence 4579999999999999999999999 99999999999999998866446889999999987543 335566667765211
Q ss_pred ---ccccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCHH
Q 019346 134 ---LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQ 210 (342)
Q Consensus 134 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (342)
..+....... ........ ...... .+..+. ..+......... .....+..++.
T Consensus 87 ~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~---~~~~~~------------~~~~~~~~~~~~---~~~~~~d~s~~ 142 (516)
T 1rsg_A 87 RTRFVFDDDNFIY-IDEERGRV-----DHDKEL---LLEIVD------------NEMSKFAELEFH---QHLGVSDCSFF 142 (516)
T ss_dssp CCCEECCCCCCEE-EETTTEEC-----TTCTTT---CHHHHH------------HHHHHHHHHHC----------CCBHH
T ss_pred ceeEEECCCCEEE-EcCCCccc-----cccHHH---HHHHHH------------HHHHHHHHHHhh---hccCCCCCCHH
Confidence 1111111111 00000000 000000 011110 000000000000 00112336666
Q ss_pred HHHHHc------CCChhHHHHHHHHHHh---hccCCCCCcchHHHHHHHHHHhhhhccCcceeecCCCCCcccchHHHHH
Q 019346 211 EWMRKQ------GVPDRVTTEVFIAMSK---ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEH 281 (342)
Q Consensus 211 ~~l~~~------g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~ 281 (342)
+|+.++ .+... ...++..+.. ...+..++.++..+.. ....+. ..++.+ +..+++.|.+.
T Consensus 143 ~~l~~~l~~~~~~l~~~-~~~~~~~~~~~~~~~~g~~~~~~s~~~~~-------~~~~~~-~~~~~g--~~~l~~~l~~~ 211 (516)
T 1rsg_A 143 QLVMKYLLQRRQFLTND-QIRYLPQLCRYLELWHGLDWKLLSAKDTY-------FGHQGR-NAFALN--YDSVVQRIAQS 211 (516)
T ss_dssp HHHHHHHHHHGGGSCHH-HHHHHHHHHGGGHHHHTBCTTTSBHHHHC-------CCCSSC-CEEESC--HHHHHHHHHTT
T ss_pred HHHHHHHHHhhcccCHH-HHHHHHHHHHHHHHHhCCChHHCChHHHH-------hhccCc-chhhhC--HHHHHHHHHHh
Confidence 666542 01111 1112222221 1123345555543321 111121 223332 34444444443
Q ss_pred HHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhh
Q 019346 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLK 332 (342)
Q Consensus 282 l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~ 332 (342)
+. +.+|++|++|++|..++++ .+.|++.+|++++||+||+|+|+..+.
T Consensus 212 l~--~~~i~~~~~V~~I~~~~~~-~v~v~~~~g~~~~ad~VI~t~p~~~l~ 259 (516)
T 1rsg_A 212 FP--QNWLKLSCEVKSITREPSK-NVTVNCEDGTVYNADYVIITVPQSVLN 259 (516)
T ss_dssp SC--GGGEETTCCEEEEEECTTS-CEEEEETTSCEEEEEEEEECCCHHHHH
T ss_pred CC--CCEEEECCEEEEEEEcCCC-eEEEEECCCcEEECCEEEECCCHHHhh
Confidence 32 2579999999999974333 346889999889999999999999885
No 20
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.78 E-value=8e-19 Score=164.36 Aligned_cols=254 Identities=18% Similarity=0.208 Sum_probs=138.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccC----------------CCceeecceeEecCCc
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG----------------DGDWYETGLHIFFGAY 118 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~----------------~~~~~~~G~~~~~~~~ 118 (342)
+..+||+|||||++||+||+.|++.|++|+|||+++++||++.+.... .+..++.|++.+....
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQSH 88 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETTS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccHH
Confidence 457799999999999999999999999999999999999998765532 5678888988887666
Q ss_pred ccHHHHHHHcCCCcccccccc-ceeee-ccCCCCCccccCCCCCCCCchhh-HHHHHhcCCCCChhHHHHhhhccchhhh
Q 019346 119 PNIQNLFGELGINDRLQWKEH-SMIFA-MPNKPGEFSRFDFPEVLPAPLNG-ILAILRNNEMLTWPEKVKFAIGLLPAII 195 (342)
Q Consensus 119 ~~~~~l~~~~gi~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (342)
.+.++++++|++........ ...+. .... . + .+....... ...+... ..+.+...... ..+
T Consensus 89 -~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~-----~-~g~~~~~~~~~~~~~~~-----~~~l~~~~~~~-~~~- 152 (489)
T 2jae_A 89 -ITLDYCRELGVEIQGFGNQNANTFVNYQSDT--S-----L-SGQSVTYRAAKADTFGY-----MSELLKKATDQ-GAL- 152 (489)
T ss_dssp -THHHHHHHHTCCEEEECCCCTTSEEECCCSS--T-----T-TTCCEEHHHHHHHHHHH-----HHHHHHHHHHH-TTT-
T ss_pred -HHHHHHHHcCCceEEccccCCCceEEecCCc--c-----c-CCccccHHHHhhhhhcc-----HHHHHHHHHhc-ccc-
Confidence 88899999998743211111 01111 1100 0 0 011111110 0000000 00000000000 000
Q ss_pred cCchhhhhccCCCHHHHHHHcCCChhHHHHHHHHHHhhccCC------------CCCcchHHHHHHHHHHhhh----hcc
Q 019346 196 GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFI------------NPDELSMQCILIALNRFLQ----EKH 259 (342)
Q Consensus 196 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~----~~~ 259 (342)
.....+.+..++.+|+++.+-... +..+.......+.. .+.++...... .+..++. ...
T Consensus 153 --~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 227 (489)
T 2jae_A 153 --DQVLSREDKDALSEFLSDFGDLSD--DGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRS-GIGRNFSFDFGYDQ 227 (489)
T ss_dssp --TTTSCHHHHHHHHHHHHHHTTCCT--TSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHH-TTTTTGGGGGCTTT
T ss_pred --ccccchhhHHHHHHHHHHhhhhhh--ccccccccchhhccCCCcccccCCCCCCcCHHHHhhh-hHHHHHhhhhcccc
Confidence 000001122356666665321000 00000000000000 01122111111 0111111 122
Q ss_pred CcceeecCCCCCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCC---cEEEcCEEEEccCHHhhhcC
Q 019346 260 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 260 g~~~~~~~g~~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G---~~i~a~~VI~At~~~~~~~L 334 (342)
...+.++.|| .+.|++.|.+.+.+ ++|++|++|++|..++++ + .|++.+| ++++||+||+|+|+..+..|
T Consensus 228 ~~~~~~~~gG-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l 300 (489)
T 2jae_A 228 AMMMFTPVGG-MDRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEG-V-TVEYTAGGSKKSITADYAICTIPPHLVGRL 300 (489)
T ss_dssp SSSEEEETTC-TTHHHHHHHHHHCG--GGEETTCEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECSCHHHHTTS
T ss_pred CccEEeecCC-HHHHHHHHHHhcCC--CeEEECCEEEEEEEcCCe-E-EEEEecCCeEEEEECCEEEECCCHHHHHhC
Confidence 3345566666 67888888887743 689999999999985554 3 4777776 58999999999999988776
No 21
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.77 E-value=2.9e-17 Score=154.13 Aligned_cols=258 Identities=17% Similarity=0.218 Sum_probs=143.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeecc-CCCceeecceeEecCCcccHHHHHHHcCCCcc
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKD-GDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~-~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~~~ 133 (342)
...+||+|||||++|++||+.|++.|++|+|||+++++||++.+... ..+..++.|++++......+.++++++|++..
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN 110 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce
Confidence 34679999999999999999999999999999999999999877653 35778899999988777788999999998743
Q ss_pred cccc-ccceeeeccCCCCCc-------cccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhcc
Q 019346 134 LQWK-EHSMIFAMPNKPGEF-------SRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQD 205 (342)
Q Consensus 134 ~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (342)
.... .....+......... ..+...-...........++... ........... .........+
T Consensus 111 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~~ 181 (498)
T 2iid_A 111 EFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEES----LGKVVEELKRT-----NCSYILNKYD 181 (498)
T ss_dssp EECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHH----THHHHHHHHHS-----CHHHHHHHHT
T ss_pred eecccCCccEEEeCCeeecccccccCccccccCCCccccCCCHHHHHHHH----HHHHHHHHhhc-----cHHHHHHHhh
Confidence 1110 000111110000000 00000000000000001111000 00000000000 0001112335
Q ss_pred CCCHHHHHHHcC-CChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhhhhccCcceeecCCCCCcccchHHHHHHHh
Q 019346 206 GLTVQEWMRKQG-VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQS 284 (342)
Q Consensus 206 ~~~~~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~ 284 (342)
..++.+|++..+ +...... .+..+........ ........... .+ ..+..+..+.|| +..+++.|.+.+.+
T Consensus 182 ~~s~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~-~~--~~~~~~~~~~gG-~~~l~~~l~~~l~~ 253 (498)
T 2iid_A 182 TYSTKEYLIKEGDLSPGAVD-MIGDLLNEDSGYY---VSFIESLKHDD-IF--AYEKRFDEIVDG-MDKLPTAMYRDIQD 253 (498)
T ss_dssp TSBHHHHHHHTSCCCHHHHH-HHHHHTTCGGGTT---SBHHHHHHHHH-HH--TTCCCEEEETTC-TTHHHHHHHHHTGG
T ss_pred hhhHHHHHHHccCCCHHHHH-HHHHhcCcccchh---HHHHHHHHHHh-cc--ccCcceEEeCCc-HHHHHHHHHHhccc
Confidence 578899998865 3333222 2222211110000 11111111111 11 123344556665 67888888887754
Q ss_pred cCcEEEecceeeEEEEcCCCCEEEEEecCCc----EEEcCEEEEccCHHhhhcC
Q 019346 285 LGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 285 ~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~----~i~a~~VI~At~~~~~~~L 334 (342)
+|++|++|++|..++++. .|++.+|+ +++||+||+|+|+..+..|
T Consensus 254 ---~i~~~~~V~~I~~~~~~v--~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i 302 (498)
T 2iid_A 254 ---KVHFNAQVIKIQQNDQKV--TVVYETLSKETPSVTADYVIVCTTSRAVRLI 302 (498)
T ss_dssp ---GEESSCEEEEEEECSSCE--EEEEECSSSCCCEEEESEEEECSCHHHHTTS
T ss_pred ---ccccCCEEEEEEECCCeE--EEEEecCCcccceEEeCEEEECCChHHHhhe
Confidence 799999999999855543 57777664 4899999999999988776
No 22
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.76 E-value=7.2e-20 Score=166.74 Aligned_cols=240 Identities=15% Similarity=0.188 Sum_probs=146.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCceEEEecCCCCCcceeeeccC-CCcee-ecceeEecCCcccHHHHHHHcCCCc
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKIAAWKDG-DGDWY-ETGLHIFFGAYPNIQNLFGELGIND 132 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~-g~~v~vle~~~~~gG~~~~~~~~-~~~~~-~~G~~~~~~~~~~~~~l~~~~gi~~ 132 (342)
.++||+|||||++|++||+.|++. |++|+|+|+++++||++.+.... .+..+ +.|+|++...++.+.++++++|+..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~~ 85 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDFT 85 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCCBC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhhhh
Confidence 468999999999999999999999 99999999999999999887754 57777 4899999888888999999988622
Q ss_pred cccccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHH-hhhccchhhhcCchhhhhccCCCHHH
Q 019346 133 RLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVK-FAIGLLPAIIGGQAYVEAQDGLTVQE 211 (342)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (342)
. +.. ...+.. .+.... .+.....+..++... .. .+.+. .+....... ...+..++.+
T Consensus 86 ~--~~~-~~~~~~---~G~~~~------~p~~~~~~~~l~~~~--~~-~~~~~~~l~~~~~~~-------~~~~~~s~~e 143 (399)
T 1v0j_A 86 D--YRH-RVFAMH---NGQAYQ------FPMGLGLVSQFFGKY--FT-PEQARQLIAEQAAEI-------DTADAQNLEE 143 (399)
T ss_dssp C--CCC-CEEEEE---TTEEEE------ESSSHHHHHHHHTSC--CC-HHHHHHHHHHHGGGS-------CTTC----CC
T ss_pred c--ccc-ceEEEE---CCEEEe------CCCCHHHHHHHhccc--CC-HHHHHHHHHHHhhcc-------CCCCcccHHH
Confidence 1 111 111111 111111 111222233333221 11 11111 111111110 1124578888
Q ss_pred HHHHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhh-hhc-cCcce-eecCCCCCcccchHHHHHHHhcCcE
Q 019346 212 WMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL-QEK-HGSKM-AFLDGNPPERLCLPIVEHIQSLGGE 288 (342)
Q Consensus 212 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~g~~~-~~~~g~~~~~l~~~l~~~l~~~Gv~ 288 (342)
|+.+. +...+.+.++.++....+..+++++++.........+. ... ....+ .++.|| +.++++.|.+ +.|++
T Consensus 144 ~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~~ 218 (399)
T 1v0j_A 144 KAISL-IGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDG-YTAWLQNMAA---DHRIE 218 (399)
T ss_dssp HHHHH-HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTH-HHHHHHHHTC---STTEE
T ss_pred HHHHH-HhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhccccccc-HHHHHHHHHh---cCCeE
Confidence 99874 67788888888888888888888887654310000000 000 11123 255554 4455555443 35789
Q ss_pred EEecceeeEEEEcCCCCEEEEEecCCcEE-EcCEEEEccCHHhhhcC
Q 019346 289 VRLNSRVQKIELNDDGTVKNFLLTNGNVI-DGDAYLISSSFSYLKTG 334 (342)
Q Consensus 289 i~~~t~V~~I~~~~~g~~~~v~t~~G~~i-~a~~VI~At~~~~~~~L 334 (342)
|++|++|++|... | . ++ .||+||+|+|+..+..+
T Consensus 219 I~l~~~V~~I~~~-------v----~-~~~~aD~VI~t~p~~~l~~~ 253 (399)
T 1v0j_A 219 VRLNTDWFDVRGQ-------L----R-PGSPAAPVVYTGPLDRYFDY 253 (399)
T ss_dssp EECSCCHHHHHHH-------H----T-TTSTTCCEEECSCHHHHTTT
T ss_pred EEECCchhhhhhh-------h----h-hcccCCEEEECCcHHHHHhh
Confidence 9999999999642 2 1 45 79999999999987654
No 23
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.75 E-value=1.5e-18 Score=157.18 Aligned_cols=234 Identities=18% Similarity=0.191 Sum_probs=148.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccC-CCcee-ecceeEecCCcccHHHHHHHcCCCccc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG-DGDWY-ETGLHIFFGAYPNIQNLFGELGINDRL 134 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~-~~~~~-~~G~~~~~~~~~~~~~l~~~~gi~~~~ 134 (342)
++||+|||||++|+++|+.|++.|++|+|+|+++.+||.+.+.... .|..+ +.|+|++...++.+.+++++++....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~- 81 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAEMMP- 81 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTSCEEE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHhhhcc-
Confidence 4799999999999999999999999999999999999999886643 56665 89999998888889999999885211
Q ss_pred cccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCHHHHHH
Q 019346 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (342)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 214 (342)
+... ..... ++.... ++.....+..++... ....+..+.+...... . ..+..++.+|+.
T Consensus 82 -~~~~-~~~~~---~g~~~~------~P~~~~~~~~l~~~~--~~~~~~~~~l~~~~~~----~----~~~~~sl~e~~~ 140 (384)
T 2bi7_A 82 -YVNR-VKATV---NGQVFS------LPINLHTINQFFSKT--CSPDEARALIAEKGDS----T----IADPQTFEEEAL 140 (384)
T ss_dssp -CCCC-EEEEE---TTEEEE------ESCCHHHHHHHTTCC--CCHHHHHHHHHHHSCC----S----CSSCCBHHHHHH
T ss_pred -cccc-eEEEE---CCEEEE------CCCChhHHHHHhccc--CCHHHHHHHHHHhhhc----c----CCCCcCHHHHHH
Confidence 1111 11111 111100 122222233332211 1111111122111110 0 124578999998
Q ss_pred HcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHh-hhh-ccCcce-eecCCCCCcccchHHHHHHHhcCcEEEe
Q 019346 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-LQE-KHGSKM-AFLDGNPPERLCLPIVEHIQSLGGEVRL 291 (342)
Q Consensus 215 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~g~~~-~~~~g~~~~~l~~~l~~~l~~~Gv~i~~ 291 (342)
+. +...+.+.++.++....+..++++++..........+ ... .....+ .++.|| +..+++.|.+ +.|++|++
T Consensus 141 ~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~~I~l 215 (384)
T 2bi7_A 141 RF-IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCG-YTQMIKSILN---HENIKVDL 215 (384)
T ss_dssp HH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTH-HHHHHHHHHC---STTEEEEE
T ss_pred Hh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcC-HHHHHHHHHh---cCCCEEEE
Confidence 87 7788899999999999999999988875431000000 000 011223 266655 4555555554 25789999
Q ss_pred cceee-EEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 292 NSRVQ-KIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 292 ~t~V~-~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
+++|+ +|.. .+|+||+|+|+..+..+
T Consensus 216 ~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~ 242 (384)
T 2bi7_A 216 QREFIVEERT-----------------HYDHVFYSGPLDAFYGY 242 (384)
T ss_dssp SCCCCGGGGG-----------------GSSEEEECSCHHHHTTT
T ss_pred CCeeehhhhc-----------------cCCEEEEcCCHHHHHHh
Confidence 99999 7742 29999999999987653
No 24
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.74 E-value=3.2e-17 Score=146.65 Aligned_cols=81 Identities=33% Similarity=0.602 Sum_probs=71.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecC-CCCCcceeeecc---------CCCceeecceeEecCCcccHHH
Q 019346 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR-DVLGGKIAAWKD---------GDGDWYETGLHIFFGAYPNIQN 123 (342)
Q Consensus 54 ~~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~-~~~gG~~~~~~~---------~~~~~~~~G~~~~~~~~~~~~~ 123 (342)
....+||+|||||++||+||+.|.+.|++|+|||++ +++||++.+... ..+..++.|++++...++.+.+
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~ 120 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLA 120 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHH
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHH
Confidence 346789999999999999999999999999999999 999999987663 2578899999999888888999
Q ss_pred HHHHcCCCccc
Q 019346 124 LFGELGINDRL 134 (342)
Q Consensus 124 l~~~~gi~~~~ 134 (342)
+++++|++...
T Consensus 121 ~~~~lGl~~~~ 131 (376)
T 2e1m_A 121 LIDKLGLKRRL 131 (376)
T ss_dssp HHHHTTCCEEE
T ss_pred HHHHcCCCcce
Confidence 99999997653
No 25
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.74 E-value=3.6e-18 Score=153.99 Aligned_cols=236 Identities=18% Similarity=0.237 Sum_probs=149.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCcee-ecceeEecCCcccHHHHHHHcCCCc
Q 019346 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWY-ETGLHIFFGAYPNIQNLFGELGIND 132 (342)
Q Consensus 54 ~~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~l~~~~gi~~ 132 (342)
....+||+|||||++|+++|+.|++.|++|+|+|+++.+||.+.+.....|..+ +.|+|.+....+.+.+++++++...
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 105 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTEWR 105 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCCEE
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhhcc
Confidence 446789999999999999999999999999999999999999987654566654 9999999888888999999998432
Q ss_pred cccccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCHHHH
Q 019346 133 RLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (342)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (342)
. +.. ...... .+.+.. +|.....+..++.. ..........+.. . .....+..++.+|
T Consensus 106 ~--~~~-~~~~~~---~g~l~~------lP~~~~~~~~l~~~--~~~~~~~~~~l~~----~-----~~~~~~~~s~~e~ 162 (397)
T 3hdq_A 106 P--YQH-RVLASV---DGQLLP------IPINLDTVNRLYGL--NLTSFQVEEFFAS----V-----AEKVEQVRTSEDV 162 (397)
T ss_dssp E--CCC-BEEEEE---TTEEEE------ESCCHHHHHHHHTC--CCCHHHHHHHHHH----H-----CCCCSSCCBHHHH
T ss_pred c--ccc-cceEEE---CCEEEE------cCCChHHHHHhhcc--CCCHHHHHHHHhh----c-----ccCCCCCcCHHHH
Confidence 1 111 111111 112111 12222223333321 1122111111110 0 0112356899999
Q ss_pred HHHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhhh--hc-cCcce-eecCCCCCcccchHHHHHHHhcCcE
Q 019346 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EK-HGSKM-AFLDGNPPERLCLPIVEHIQSLGGE 288 (342)
Q Consensus 213 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~g~~~-~~~~g~~~~~l~~~l~~~l~~~Gv~ 288 (342)
+.+. +...+.+.++.++..+.++.+++++++.+.. .+..... .. +...+ .++.+| +.+++..|+ ...|++
T Consensus 163 ~~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~-Rvp~~~~~d~~yf~~~~qg~P~gG-y~~l~e~l~---~~~g~~ 236 (397)
T 3hdq_A 163 VVSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTA-RVPTRTNRDNRYFADTYQAMPLHG-YTRMFQNML---SSPNIK 236 (397)
T ss_dssp HHHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGG-GSCCCSSCCCBSCCCSEEEEETTC-HHHHHHHHT---CSTTEE
T ss_pred HHHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHH-hcCcccccCccchhhhheeccCCC-HHHHHHHHH---hccCCE
Confidence 9876 6778899999999999999999999976432 1100000 00 01112 245555 344444443 234899
Q ss_pred EEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhc
Q 019346 289 VRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKT 333 (342)
Q Consensus 289 i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~ 333 (342)
|++|++|+++ +.++.+|+||.|+|...+..
T Consensus 237 V~l~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~ 266 (397)
T 3hdq_A 237 VMLNTDYREI---------------ADFIPFQHMIYTGPVDAFFD 266 (397)
T ss_dssp EEESCCGGGT---------------TTTSCEEEEEECSCHHHHTT
T ss_pred EEECCeEEec---------------cccccCCEEEEcCCHHHHHH
Confidence 9999999733 23567999999999886543
No 26
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.73 E-value=1.1e-18 Score=157.15 Aligned_cols=235 Identities=16% Similarity=0.161 Sum_probs=147.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceee-cceeEecCCcccHHHHHHHcCCCcccc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYE-TGLHIFFGAYPNIQNLFGELGINDRLQ 135 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~l~~~~gi~~~~~ 135 (342)
++||+|||||++|+++|+.|++.|++|+|+|+++.+||.+.+... .+..++ .|+|++...++.+.+++++++....
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~-- 77 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDC-EGIQIHKYGAHIFHTNDKYIWDYVNDLVEFNR-- 77 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEE-TTEEEETTSCCCEEESCHHHHHHHHTTSCBCC--
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeecc-CCceeeccCCceecCCCHHHHHHHHHhhhhhh--
Confidence 369999999999999999999999999999999999999987663 567775 8999988777888888888875321
Q ss_pred ccccceeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCCCHHHHHHH
Q 019346 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (342)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 215 (342)
+....... . .+... . .+.....+..++... ...+...++....... ...+..++.+|+.+
T Consensus 78 ~~~~~~~~-~---~g~~~--~----~p~~~~~~~~l~~~~---~~~~~~~~l~~~~~~~-------~~~~~~s~~~~~~~ 137 (367)
T 1i8t_A 78 FTNSPLAI-Y---KDKLF--N----LPFNMNTFHQMWGVK---DPQEAQNIINAQKKKY-------GDKVPENLEEQAIS 137 (367)
T ss_dssp CCCCCEEE-E---TTEEE--E----SSBSHHHHHHHHCCC---CHHHHHHHHHHHTTTT-------CCCCCCSHHHHHHH
T ss_pred ccccceEE-E---CCeEE--E----cCCCHHHHHHHhccC---CHHHHHHHHHHHhhcc-------CCCCCccHHHHHHH
Confidence 11111111 0 11110 0 122223333333221 1111111221111110 12245889999988
Q ss_pred cCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHh-hhhc-cCcce-eecCCCCCcccchHHHHHHHhcCcEEEec
Q 019346 216 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-LQEK-HGSKM-AFLDGNPPERLCLPIVEHIQSLGGEVRLN 292 (342)
Q Consensus 216 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~g~~~-~~~~g~~~~~l~~~l~~~l~~~Gv~i~~~ 292 (342)
. +...+.+.++.++....++.+++++++.......... .... ....| .++.|| +..+++.|. + |++|++|
T Consensus 138 ~-~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~----~-g~~i~l~ 210 (367)
T 1i8t_A 138 L-VGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGG-YTKLIEKML----E-GVDVKLG 210 (367)
T ss_dssp H-HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTC-HHHHHHHHH----T-TSEEECS
T ss_pred H-HhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCC-HHHHHHHHh----c-CCEEEeC
Confidence 7 7778888899999999999999988865431000000 0000 11223 266655 445555544 3 6899999
Q ss_pred ceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 293 SRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 293 t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
++|++|.. . | ++.+|+||+|+|+..+..+
T Consensus 211 ~~V~~i~~---~----v------~~~~D~VV~a~p~~~~~~~ 239 (367)
T 1i8t_A 211 IDFLKDKD---S----L------ASKAHRIIYTGPIDQYFDY 239 (367)
T ss_dssp CCGGGSHH---H----H------HTTEEEEEECSCHHHHTTT
T ss_pred Cceeeech---h----h------hccCCEEEEeccHHHHHHH
Confidence 99998852 1 2 2469999999999976543
No 27
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.73 E-value=2.4e-17 Score=153.63 Aligned_cols=250 Identities=19% Similarity=0.208 Sum_probs=135.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCCCCcceeeeccCCCceeecceeEecC----CcccHHHHHHH-cC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFG----AYPNIQNLFGE-LG 129 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~----~~~~~~~l~~~-~g 129 (342)
..+||+|||||++|+++|+.|++.|+ +|+|+|+++.+||++.+.. ..+..+|.|++++.+ ....+.+++++ +|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~-~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lg 81 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTN-FAGINVELGANWVEGVNGGKMNPIWPIVNSTLK 81 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEE-ETTEEEESSCCEEEEESSSSCCTHHHHHHTTSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecc-cCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcC
Confidence 45799999999999999999999998 8999999999999998765 357889999999873 34557889999 88
Q ss_pred CCcccccc-ccc-eeeeccCCCCCccccCCCCCCCCchhhHHHHHhcCCCCChhHHHHhhhccchhhhcCchhhhhccCC
Q 019346 130 INDRLQWK-EHS-MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGL 207 (342)
Q Consensus 130 i~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (342)
+....... ... .++. ..+.. .+.......+... .........+.... .. ...+..
T Consensus 82 l~~~~~~~~~~~~~~~~---~~g~~----------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~--~~~~~~ 138 (472)
T 1b37_A 82 LRNFRSDFDYLAQNVYK---EDGGV----------YDEDYVQKRIELA-----DSVEEMGEKLSATL---HA--SGRDDM 138 (472)
T ss_dssp CCEEECCCTTGGGCEEC---SSSSB----------CCHHHHHHHHHHH-----HHHHHHHHHHHHTS---CT--TCTTCC
T ss_pred CceeeccCccccceeEc---CCCCC----------CCHHHHHHHHHHH-----HHHHHHHHHHHHhh---cc--ccchhh
Confidence 87532111 000 0110 01111 0111111111100 00000000000000 00 011223
Q ss_pred CHH--HHHHHcCC--ChhHHHHHHHHHHhh-ccCCCCCcchHHHHHHHHHHhhhhccCcceee-cCCCCCcccchHHHHH
Q 019346 208 TVQ--EWMRKQGV--PDRVTTEVFIAMSKA-LNFINPDELSMQCILIALNRFLQEKHGSKMAF-LDGNPPERLCLPIVEH 281 (342)
Q Consensus 208 ~~~--~~l~~~g~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~~~l~~~l~~~ 281 (342)
++. .++.+... .....+.++..+... .+..+++..++..... ...+.. ..+..+.. ..+| +..+++.|.+.
T Consensus 139 s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~~~~~~-~~~~~~~~~~~gG-~~~l~~~l~~~ 215 (472)
T 1b37_A 139 SILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVP-LATFSD-FGDDVYFVADQRG-YEAVVYYLAGQ 215 (472)
T ss_dssp BHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSS-CHHHHH-HCSEEEEECCTTC-TTHHHHHHHHT
T ss_pred hHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhccc-cccccc-cCCceeeeecCCc-HHHHHHHHHHh
Confidence 333 24433311 111112222222211 1111222222110000 000001 11112222 2344 67888888888
Q ss_pred HHhc--------CcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 282 IQSL--------GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 282 l~~~--------Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
+.+. |++|+++++|++|..++++ + .|++.+|++++||+||+|+|++.+..+
T Consensus 216 l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~~ 274 (472)
T 1b37_A 216 YLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-V-TVKTEDNSVYSADYVMVSASLGVLQSD 274 (472)
T ss_dssp TSCBCTTTCCBCCTTEESSCCEEEEEECSSC-E-EEEETTSCEEEESEEEECSCHHHHHTT
T ss_pred ccccccccccccccEEEcCCEEEEEEEcCCc-E-EEEECCCCEEEcCEEEEecCHHHhccC
Confidence 7665 6899999999999986555 3 488999989999999999999988653
No 28
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.72 E-value=1.6e-16 Score=154.83 Aligned_cols=79 Identities=33% Similarity=0.421 Sum_probs=68.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcc-cHHHHHHHcCCCcc
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYP-NIQNLFGELGINDR 133 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~l~~~~gi~~~ 133 (342)
...+||+|||||++|+++|+.|++.|++|+|+|+++.+||++.+.....+..++.|++++.+... .+..+.+++|++..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~ 413 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMH 413 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCccChHHHHHHHhCCccc
Confidence 45689999999999999999999999999999999999999988776678899999999876444 36778899998743
No 29
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.67 E-value=1.9e-14 Score=136.10 Aligned_cols=118 Identities=19% Similarity=0.192 Sum_probs=80.9
Q ss_pred hccCCCHHHHHHHcCCChhHHHHHHHHHHhhccCCCCCcchHHHHHHHHHHhhh---hccCcceeecCCCCCcccchHHH
Q 019346 203 AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ---EKHGSKMAFLDGNPPERLCLPIV 279 (342)
Q Consensus 203 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~g~~~~~l~~~l~ 279 (342)
..+..++.+|+++++....+...+.. .. ++. ..+..+....+..+..++. ...+..+.|+.|| ...|++.|.
T Consensus 311 ~~d~~S~~d~L~~~~ls~~L~~~L~~-~l-al~--~~~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG-~g~L~qaL~ 385 (650)
T 1vg0_A 311 AYEGTTFSEYLKTQKLTPNLQYFVLH-SI-AMT--SETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYG-QGELPQCFC 385 (650)
T ss_dssp TTTTSBHHHHHTTSSSCHHHHHHHHH-HT-TC----CCSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTC-TTHHHHHHH
T ss_pred hhccCCHHHHHHHhCCCHHHHHHHHH-HH-hcc--CCCCCchhHHHHHHHHHHHHHHhhccCceEEeCCc-hhHHHHHHH
Confidence 45678999999998777665443322 11 111 1222234333322223221 1122367788887 889999999
Q ss_pred HHHHhcCcEEEecceeeEEEEcCC-CCEEEEEecCCcEEEcCEEEEc
Q 019346 280 EHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYLIS 325 (342)
Q Consensus 280 ~~l~~~Gv~i~~~t~V~~I~~~~~-g~~~~v~t~~G~~i~a~~VI~A 325 (342)
+.+...|++|+++++|.+|..+++ |.+.+|++.+|++++||+||.+
T Consensus 386 r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~ 432 (650)
T 1vg0_A 386 RMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE 432 (650)
T ss_dssp HHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE
T ss_pred HHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC
Confidence 999999999999999999987543 7787888788999999999983
No 30
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.65 E-value=1.2e-15 Score=140.85 Aligned_cols=63 Identities=13% Similarity=0.172 Sum_probs=55.4
Q ss_pred CcccchHHHHHHHhcCcEEEecc---eeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNS---RVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t---~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
+..++..|.+.++++|++|++++ +|++|..+ ++.+.+|+|.+|++++||+||+|+++|+..++
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGGGGTS
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCChhhhc
Confidence 56889999999999999999999 99999884 55566799999988999999999999987555
No 31
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.65 E-value=4.1e-16 Score=149.22 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=67.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcC--------CceEEEecCC-CC----------------CcceeeeccC------CCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAG--------HKPLLLEARD-VL----------------GGKIAAWKDG------DGD 105 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g--------~~v~vle~~~-~~----------------gG~~~~~~~~------~~~ 105 (342)
..+|+|||||++||+||+.|.+.| ++|+|+|+++ ++ ||++.+.... .+.
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~~~~~~~ 135 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGDPASGDT 135 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECSSCGGGCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccCCcccCCCc
Confidence 468999999999999999999998 9999999999 99 9998876542 468
Q ss_pred eeecceeEecCCcccHHHHHHHc-CCC
Q 019346 106 WYETGLHIFFGAYPNIQNLFGEL-GIN 131 (342)
Q Consensus 106 ~~~~G~~~~~~~~~~~~~l~~~~-gi~ 131 (342)
.++.|++++......+.++++++ |++
T Consensus 136 ~~e~G~~~~~~~~~~~~~~~~~l~gl~ 162 (721)
T 3ayj_A 136 IYEVGAMRFPEIAGLTWHYASAAFGDA 162 (721)
T ss_dssp EEECSCCCEETTCHHHHHHHHHHHCTT
T ss_pred EEecCCEEecCccHHHHHHHHHhcCCc
Confidence 89999999998888889999999 986
No 32
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.65 E-value=2.1e-16 Score=142.92 Aligned_cols=62 Identities=13% Similarity=0.050 Sum_probs=53.6
Q ss_pred CCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 270 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 270 ~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
+|.+++..|.+.++++|++|+++++|++|..++++ +.|+|.+| +++||+||+|+++|+..++
T Consensus 152 ~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~--~~V~t~~g-~i~a~~VV~A~G~~s~~l~ 213 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA--WEVRCDAG-SYRAAVLVNAAGAWCDAIA 213 (381)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE--EEEECSSE-EEEESEEEECCGGGHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe--EEEEeCCC-EEEcCEEEECCChhHHHHH
Confidence 36789999999999999999999999999985444 47889888 8999999999999975443
No 33
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.63 E-value=7.1e-15 Score=142.70 Aligned_cols=62 Identities=13% Similarity=0.168 Sum_probs=53.5
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
|..++..|.+.++++|++|+++++|++|..++++ +.|++.+|+++.||.||+|++.++..++
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~i~Ad~VVlAtG~~s~~l~ 477 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC--WLLNFAGDQQATHSVVVLANGHQISRFS 477 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECCGGGGGCST
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe--EEEEECCCCEEECCEEEECCCcchhccc
Confidence 6789999999999999999999999999985554 3688888779999999999999976443
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.62 E-value=2.6e-16 Score=141.59 Aligned_cols=63 Identities=8% Similarity=0.104 Sum_probs=53.4
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCC--cEEEcCEEEEccCHHhhhcC
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G--~~i~a~~VI~At~~~~~~~L 334 (342)
+..++..|.+.++++|++|+++++|++|..++++.+ .|++.+| .+++||+||+|++.++..++
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s~~l~ 213 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHAPGLA 213 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcchHHHH
Confidence 668899999999999999999999999998655533 5888888 48999999999999975543
No 35
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.62 E-value=1.8e-15 Score=138.03 Aligned_cols=60 Identities=12% Similarity=0.142 Sum_probs=52.1
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhh
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLK 332 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~ 332 (342)
|.+++..|.+.+++.|++|+++++|++|..+ ++.++.|++.+| +++||.||+|++.++..
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~ 232 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSSV 232 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHHH
Confidence 5688899999999999999999999999874 455667888888 89999999999998743
No 36
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.61 E-value=1.1e-14 Score=129.94 Aligned_cols=59 Identities=19% Similarity=0.187 Sum_probs=47.4
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
...+++.+.+.+ |++|+++++|++|+.+++++ .|++.+|+++.||+||+|+|+..+..|
T Consensus 111 ~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~~--~v~~~~g~~~~ad~vV~A~p~~~~~~l 169 (342)
T 3qj4_A 111 ISSIIKHYLKES---GAEVYFRHRVTQINLRDDKW--EVSKQTGSPEQFDLIVLTMPVPEILQL 169 (342)
T ss_dssp TTHHHHHHHHHH---TCEEESSCCEEEEEECSSSE--EEEESSSCCEEESEEEECSCHHHHTTC
T ss_pred HHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCEE--EEEECCCCEEEcCEEEECCCHHHHHHH
Confidence 445666665554 89999999999999865553 588888877999999999999887666
No 37
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.60 E-value=7e-15 Score=133.82 Aligned_cols=60 Identities=13% Similarity=0.154 Sum_probs=50.5
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhc
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKT 333 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~ 333 (342)
|.+++..|.+.++++|++|+++++|++|..++++ + .|+|.+| +++||+||+|++.++..+
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-v-~v~t~~g-~i~a~~VV~A~G~~s~~l 211 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDADG-V-SVTTDRG-TYRAGKVVLACGPYTNDL 211 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-E-EEEESSC-EEEEEEEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCe-E-EEEECCC-EEEcCEEEEcCCcChHHH
Confidence 5678899999999999999999999999875444 3 4778777 899999999999986543
No 38
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.60 E-value=2.3e-14 Score=139.35 Aligned_cols=62 Identities=10% Similarity=0.129 Sum_probs=52.8
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCc-EEEcCEEEEccCHHhhhcC
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~-~i~a~~VI~At~~~~~~~L 334 (342)
|.+++..|.+.+++.|++|+++++|++|..++++ +.|+|.+|+ +++||.||+|++.++..++
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~ 473 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--WQLTFGQSQAAKHHATVILATGHRLPEWE 473 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS--EEEEEC-CCCCEEESEEEECCGGGTTCST
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--EEEEeCCCcEEEECCEEEECCCcchhccc
Confidence 6789999999999999999999999999986555 368888887 8999999999999975443
No 39
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.59 E-value=4.2e-15 Score=134.57 Aligned_cols=60 Identities=10% Similarity=0.122 Sum_probs=52.1
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhh
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLK 332 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~ 332 (342)
|.++++.|.+.++++|++|+++++|++|..+ ++.+.+|+|.+| +++||+||+|++.++..
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~ 207 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWANL 207 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHHH
Confidence 6788999999999999999999999999884 445556888888 89999999999999743
No 40
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.59 E-value=7e-15 Score=132.57 Aligned_cols=61 Identities=15% Similarity=0.129 Sum_probs=52.6
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
|.++++.|.+.++++|++|+++++|++|+.++++ +.|+|.+| +++||+||+|+++++..++
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~a~~vV~a~G~~s~~l~ 208 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--VTIETADG-EYQAKKAIVCAGTWVKDLL 208 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-EEEEEEEEECCGGGGGGTS
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--EEEEECCC-eEEcCEEEEcCCccHHhhc
Confidence 5688999999999999999999999999985454 35888888 7999999999999986554
No 41
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.58 E-value=2.3e-14 Score=127.31 Aligned_cols=70 Identities=26% Similarity=0.445 Sum_probs=53.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHH
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGE 127 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~ 127 (342)
++||+|||||++|+++|+.|++.|.+|+|||+.+.+||...+.. ..+..++.|...+....+.+.++++.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDRRFATAVKQ 71 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSHHHHHHHHH
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEe-cCCCeEecCCCeEecCCHHHHHHHHH
Confidence 46999999999999999999999999999999999999876543 23445666666655444444444443
No 42
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.58 E-value=1.3e-14 Score=131.49 Aligned_cols=61 Identities=20% Similarity=0.205 Sum_probs=52.0
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
|.+++..|.+.++++|++|+++++|++|+.++++ +.|+|.+| +++||.||+|++.++..++
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~a~~vV~A~G~~~~~l~ 209 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAKVLTHTRVEDFDISPDS--VKIETANG-SYTADKLIVSMGAWNSKLL 209 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--EEEEETTE-EEEEEEEEECCGGGHHHHG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--EEEEeCCC-EEEeCEEEEecCccHHHHh
Confidence 5688999999999999999999999999985554 25788777 8999999999999976554
No 43
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.57 E-value=1.8e-14 Score=130.32 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=50.9
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhc
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKT 333 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~ 333 (342)
+.++.+.|.+.+++.|++|+++++|++|..+++ .+ .|++.+| +++||.||+|++.++..+
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~-~~-~v~~~~g-~~~a~~vV~A~G~~s~~l 222 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGE-AL-FIKTPSG-DVWANHVVVASGVWSGMF 222 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECSSS-SE-EEEETTE-EEEEEEEEECCGGGTHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECC-EE-EEEcCCc-eEEcCEEEECCChhHHHH
Confidence 567889999999999999999999999987544 34 6888888 899999999999986533
No 44
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.56 E-value=1.2e-14 Score=134.26 Aligned_cols=58 Identities=22% Similarity=0.441 Sum_probs=50.3
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
..+++.|.+.+++.|++|+++++|++|..+ ++.++.|++.+|++++||.||+|++.++
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 467888999999999999999999999874 5555689999997799999999999876
No 45
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.56 E-value=1.3e-14 Score=141.02 Aligned_cols=98 Identities=21% Similarity=0.221 Sum_probs=74.6
Q ss_pred CCccchh--hhhccccCCCCCCeeeccCCCC--------CCcccccchHHHhhhcCC--CCCCCCCCCCCeEEEECCCHH
Q 019346 1 MGQSLKI--RVKTGTRKGFCPSKVVCVDYPR--------PDIDNTSNFLEAAYLSSS--FRTSPRPSKPLKVVIAGAGLA 68 (342)
Q Consensus 1 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dv~IiG~G~~ 68 (342)
|||++++ +|+++...|..+.+..|+.|+. ....|..++....+.... .....+....+||+|||||++
T Consensus 323 ~gR~~~~~P~~~~~~~~g~~~~i~~c~~c~~C~~~~~~~~~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~A 402 (690)
T 3k30_A 323 AARPSIADPFLPNKIRDGRLNLIRECIGCNICVSGDLTMSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPS 402 (690)
T ss_dssp ESHHHHHCTTHHHHHHTTCGGGCCCCCCCCHHHHHHHTTSCCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHH
T ss_pred EcHHhHhCccHHHHHHcCCccccccccchhhhhhcccCCCcccCCcCcccCcccccccCccccCcccccceEEEECCCHH
Confidence 6999999 6999999999999999999864 123344444433322111 111223456789999999999
Q ss_pred HHHHHHHHHHcCCceEEEecCCCCCcceee
Q 019346 69 GLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (342)
Q Consensus 69 G~~~A~~l~~~g~~v~vle~~~~~gG~~~~ 98 (342)
|++||+.|+++|++|+|+|+.+..||.+..
T Consensus 403 Gl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 403 GLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp HHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred HHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 999999999999999999999999997654
No 46
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.55 E-value=1.2e-13 Score=129.81 Aligned_cols=58 Identities=21% Similarity=0.311 Sum_probs=49.1
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCC-c--EEEcC-EEEEccCHHh
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-N--VIDGD-AYLISSSFSY 330 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G-~--~i~a~-~VI~At~~~~ 330 (342)
.++..|.+.++++|++|+++++|++|..++++.+++|.+.++ + +++|+ .||+||+.+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 688899999999999999999999999865677777876543 2 69995 9999999886
No 47
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.54 E-value=5.3e-15 Score=136.83 Aligned_cols=63 Identities=16% Similarity=0.216 Sum_probs=52.9
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEc--------------CCCCEEEEEecCCcEE--EcCEEEEccCHHhhhcC
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELN--------------DDGTVKNFLLTNGNVI--DGDAYLISSSFSYLKTG 334 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~--------------~~g~~~~v~t~~G~~i--~a~~VI~At~~~~~~~L 334 (342)
+.+++..|.+.++++|++|+++++|++|..+ +++.++.|+|.+| ++ .||.||+|+++|+..++
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~~l~ 258 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSNRLL 258 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHHHHH
Confidence 6689999999999999999999999999872 2344557888888 79 99999999999976443
No 48
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.52 E-value=4.9e-14 Score=134.17 Aligned_cols=60 Identities=18% Similarity=0.248 Sum_probs=49.5
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEec--CCc--EEEcCEEEEccCHHhh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYLISSSFSYL 331 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~--~G~--~i~a~~VI~At~~~~~ 331 (342)
..+...|.+.+++.|++|+++++|++|..++++.+.+|++. +|+ +++||.||+||+.+..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 46788899999999999999999999988554666666654 675 6899999999998753
No 49
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.52 E-value=2.6e-13 Score=131.13 Aligned_cols=78 Identities=28% Similarity=0.427 Sum_probs=66.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcc-cHHHHHHHcCCCc
Q 019346 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYP-NIQNLFGELGIND 132 (342)
Q Consensus 54 ~~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~l~~~~gi~~ 132 (342)
....+||+|||||++|++||+.|++.|++|+|+|+++.+||++.++. ..+..++.|++++.+... .+..+.+++|++.
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~l~~~l~~~~ 182 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR-KGNYVADLGAMVVTGLGGNPMAVVSKQVNMEL 182 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEE-ETTEEEESSCCEECCSBTCHHHHHHHHHTCCE
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccc-ccCchhhcCcEEEeCCCCchHHHHHHHhCcch
Confidence 35668999999999999999999999999999999999999988766 357788999999876543 3567888888754
No 50
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.52 E-value=2.9e-13 Score=132.95 Aligned_cols=77 Identities=29% Similarity=0.439 Sum_probs=65.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcc-cHHHHHHHcCCCc
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYP-NIQNLFGELGIND 132 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~l~~~~gi~~ 132 (342)
...+||+|||||++||+||+.|++.|++|+|||+++.+||++.++.. .+..++.|++++.+... .+..+.+++|++.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~~~~~~~G~~~~~~~~~~~~~~l~~~lg~~~ 353 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK-GNYVADLGAMVVTGLGGNPMAVVSKQVNMEL 353 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEEE-TTEEEESSCCEECCSBTCHHHHHHHHTTCCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeecc-cccchhcCceEecCCCCchHHHHHHHhCCch
Confidence 45679999999999999999999999999999999999999887663 57788999999876533 3567788888764
No 51
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.50 E-value=9.1e-14 Score=126.78 Aligned_cols=57 Identities=14% Similarity=0.305 Sum_probs=49.0
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
...+.+.|.+.+++.|++|+++++|++|..++++ +.|++.+| +++||.||+|++.++
T Consensus 131 ~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 131 AKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCc-EEEeeEEEECCCCcc
Confidence 3467888999999999999999999999875444 46888888 999999999999886
No 52
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.50 E-value=8.2e-14 Score=132.45 Aligned_cols=60 Identities=22% Similarity=0.297 Sum_probs=49.4
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEec--CCc--EEEcCEEEEccCHHhh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYLISSSFSYL 331 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~--~G~--~i~a~~VI~At~~~~~ 331 (342)
..+...|.+.+++.|++|+++++|++|..++++.+.+|++. +|+ +++||.||+||+.+..
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 46788899999999999999999999988543666666654 675 6999999999998864
No 53
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.49 E-value=1e-13 Score=131.34 Aligned_cols=62 Identities=15% Similarity=0.131 Sum_probs=51.8
Q ss_pred CCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecC---C--cEEEcCEEEEccCHHhhh
Q 019346 270 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYLISSSFSYLK 332 (342)
Q Consensus 270 ~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~---G--~~i~a~~VI~At~~~~~~ 332 (342)
.+.+++..+.+.+.++|++|+++++|++|..+ ++.+++|++.+ | .+++|+.||+|+++|+..
T Consensus 168 d~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~ 234 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDT 234 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcchHH
Confidence 36789999999999999999999999999984 55566777654 3 379999999999999744
No 54
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.49 E-value=1.5e-13 Score=136.30 Aligned_cols=61 Identities=25% Similarity=0.298 Sum_probs=53.1
Q ss_pred CCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhh
Q 019346 270 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLK 332 (342)
Q Consensus 270 ~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~ 332 (342)
+|.+++..|.+.++++|++|+++++|++|..+ ++.++.|+|.+| +++||+||+|++.|+..
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~ 209 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWGAK 209 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGHHH
T ss_pred cHHHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccchHH
Confidence 36789999999999999999999999999874 455557888888 89999999999999754
No 55
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.45 E-value=6.5e-13 Score=126.13 Aligned_cols=63 Identities=10% Similarity=0.003 Sum_probs=50.9
Q ss_pred CCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEec---CC--cEEEcCEEEEccCHHhhhc
Q 019346 270 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NG--NVIDGDAYLISSSFSYLKT 333 (342)
Q Consensus 270 ~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~---~G--~~i~a~~VI~At~~~~~~~ 333 (342)
.|.+++..+.+.+.++|++|+++++|++|..+ ++.+++|++. .| .+++||.||+|+++|+..+
T Consensus 186 ~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l 253 (571)
T 2rgh_A 186 NDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKV 253 (571)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHH
T ss_pred chHHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHH
Confidence 36788999999999999999999999999884 4455567643 33 3799999999999997543
No 56
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.44 E-value=3.1e-14 Score=129.86 Aligned_cols=58 Identities=14% Similarity=0.236 Sum_probs=45.8
Q ss_pred CcccchHHHHHHHhcCcEEEecceee---------EEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQ---------KIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~---------~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
+.+++..|.+.++++|++|+++++|+ +|..+++ .+ .|+|.+| +++||.||+|++.++.
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~-~v-~v~~~~g-~i~a~~VV~A~G~~s~ 237 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNT-HQ-IVVHETR-QIRAGVIIVAAGAAGP 237 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCC-eE-EEEECCc-EEECCEEEECCCccHH
Confidence 56789999999999999999999999 8876433 33 6778888 8999999999999863
No 57
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.43 E-value=2.7e-13 Score=127.11 Aligned_cols=59 Identities=25% Similarity=0.465 Sum_probs=51.0
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
..+.+.|.+.+++.|++|+++++|++|..+ ++.+.+|++.+|+++.||.||+|++.+..
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 367778889999999999999999999874 55566799999988999999999998863
No 58
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.40 E-value=2.2e-12 Score=117.17 Aligned_cols=58 Identities=10% Similarity=0.105 Sum_probs=48.4
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcC---CCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELND---DGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~---~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
...+.+.|.+.+++.|++|+++++|++|..++ ++. +.|++.+| +++||+||+||+.++
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEECCCCcc
Confidence 55788889999999999999999999998741 233 36888877 899999999998876
No 59
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.39 E-value=8.2e-13 Score=123.75 Aligned_cols=61 Identities=15% Similarity=0.127 Sum_probs=51.2
Q ss_pred CCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEe---cCCc--EEEcCEEEEccCHHhhh
Q 019346 270 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYLISSSFSYLK 332 (342)
Q Consensus 270 ~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t---~~G~--~i~a~~VI~At~~~~~~ 332 (342)
.|.+++..|.+.+.++|++|+++++|++|..++ .+++|++ .+|+ +++||.||+|+++|+..
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~ 212 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQ 212 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGHHH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhHHH
Confidence 367899999999999999999999999998743 3456777 3575 79999999999999754
No 60
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.38 E-value=3e-12 Score=117.31 Aligned_cols=59 Identities=17% Similarity=0.217 Sum_probs=50.5
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCc--EEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN--VIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~--~i~a~~VI~At~~~~ 330 (342)
..+...|.+.+.+.|++|+++++|++|..++++..+.|.+.+|+ +++||.||.|++.++
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 46677788888888999999999999998666666678888996 699999999999875
No 61
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.37 E-value=7.5e-12 Score=118.96 Aligned_cols=59 Identities=27% Similarity=0.354 Sum_probs=47.6
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEec--CCc--EEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~--~G~--~i~a~~VI~At~~~~ 330 (342)
..+...|.+.+++.|++|+++++|++|..++++.+.+|++. +|+ ++.||.||+||+.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 36778889999999999999999999987542666667664 674 689999999999875
No 62
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.37 E-value=1.9e-11 Score=116.27 Aligned_cols=60 Identities=12% Similarity=0.048 Sum_probs=48.9
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEe---cCCc--EEEcCEEEEccCHHhh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYLISSSFSYL 331 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t---~~G~--~i~a~~VI~At~~~~~ 331 (342)
..++..|.+.+.+.|++|+++++|++|..++++.+.+|.. .+|+ ++.|+.||+||+.+..
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 4678889999988999999999999998753566666664 4564 6899999999998764
No 63
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.35 E-value=1.5e-12 Score=118.88 Aligned_cols=54 Identities=20% Similarity=0.327 Sum_probs=44.1
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
.|.+.|.+.+.+ ++|+++++|++|+.++++ +.|++.+|++++||.||.|.+.++
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWFTDGSSASGDLLIAADGSHS 181 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEEcCCCEEeeCEEEECCCcCh
Confidence 455667777765 889999999999985554 358889998999999999999875
No 64
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.35 E-value=5.3e-12 Score=114.60 Aligned_cols=57 Identities=11% Similarity=0.137 Sum_probs=46.1
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEe---cCCcEEEcCEEEEccCHHh
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t---~~G~~i~a~~VI~At~~~~ 330 (342)
.+.+.|.+.+.+.|++|+++++|++|..+ ++.+.+|++ .++.+++||.||.|++.++
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 56677888888899999999999999885 555544666 3456899999999999875
No 65
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.33 E-value=1e-11 Score=117.02 Aligned_cols=60 Identities=8% Similarity=0.001 Sum_probs=45.2
Q ss_pred cccchHHHHHHHh-cCcEEEecceeeEEEEcCCC------CEEEEEec---CCc--EEEcCEEEEccCHHhh
Q 019346 272 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDG------TVKNFLLT---NGN--VIDGDAYLISSSFSYL 331 (342)
Q Consensus 272 ~~l~~~l~~~l~~-~Gv~i~~~t~V~~I~~~~~g------~~~~v~t~---~G~--~i~a~~VI~At~~~~~ 331 (342)
..++..|.+.+++ .|++|+++++|++|..++++ .+.+|.+. +|+ ++.|+.||+||+.+..
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 209 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASK 209 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccc
Confidence 4677888888888 69999999999999874334 66667664 564 7999999999998763
No 66
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.31 E-value=1.7e-11 Score=116.45 Aligned_cols=58 Identities=16% Similarity=0.188 Sum_probs=47.5
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEec-CC--cEEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~-~G--~~i~a~~VI~At~~~~ 330 (342)
..+...|.+.+++.|++++++++|++|..+ ++..+.|++. +| .+++||.||.|++.++
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 356777888888899999999999999874 3444567776 66 5899999999999876
No 67
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.30 E-value=6.8e-12 Score=118.94 Aligned_cols=58 Identities=12% Similarity=0.099 Sum_probs=46.5
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCC-cEEEcCEEEEccCHHh
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYLISSSFSY 330 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G-~~i~a~~VI~At~~~~ 330 (342)
.+.+.|.+.+.+.|++|+++++|++|+.++++..+.+.+.+| ++++||.||.|.+.++
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 566778888888899999999999998866665433333778 6899999999999875
No 68
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.29 E-value=3.7e-11 Score=115.38 Aligned_cols=59 Identities=12% Similarity=0.147 Sum_probs=47.8
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEe---cCCc--EEEcCEEEEccCHHhh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYLISSSFSYL 331 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t---~~G~--~i~a~~VI~At~~~~~ 331 (342)
..++..|.+.+.+.|++|++++.|++|.. +++.+.+|.+ .+|+ .++|+.||+||+.+..
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 36788888888889999999999999987 4566666654 4674 4999999999998864
No 69
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.29 E-value=4.1e-11 Score=114.30 Aligned_cols=59 Identities=7% Similarity=0.057 Sum_probs=48.3
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEe---cCCc--EEEcCEEEEccCHHhh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYLISSSFSYL 331 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t---~~G~--~i~a~~VI~At~~~~~ 331 (342)
..++..|.+.+.+.|++|++++.|++|..+ ++.+.+|.+ .+|+ +++|+.||+||+.+..
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 367888888888889999999999999874 566666665 3564 6999999999998864
No 70
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.29 E-value=7.7e-11 Score=110.69 Aligned_cols=60 Identities=17% Similarity=0.242 Sum_probs=52.0
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
...+...|.+.+.+.|++++++ +|++|..++++.++.|++.+|++++||.||.|++.++.
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 4577888889898899999999 99999886667777899999988999999999999864
No 71
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.29 E-value=1.3e-11 Score=109.34 Aligned_cols=46 Identities=37% Similarity=0.477 Sum_probs=38.2
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecC----CCCCcceee
Q 019346 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR----DVLGGKIAA 98 (342)
Q Consensus 53 ~~~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~----~~~gG~~~~ 98 (342)
..+..+||+|||||++|+++|+.|++.|++|+|+|+. ..+||.+..
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~ 67 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT 67 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc
Confidence 3456789999999999999999999999999999994 467876653
No 72
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.27 E-value=6.1e-12 Score=108.09 Aligned_cols=68 Identities=26% Similarity=0.455 Sum_probs=56.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHH
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLF 125 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~ 125 (342)
++||+|||||++||+||+.|+++|++|+||||.+.+||++.+.. ..+..++.|.+.+......+....
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~-~~~~~~d~g~~~~~~~~~~~~~~~ 69 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDRRFATAV 69 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccc-cCCceeecCccccccCcHHHHHHH
Confidence 57999999999999999999999999999999999999987644 456778888877765555444433
No 73
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.27 E-value=2.4e-11 Score=113.65 Aligned_cols=57 Identities=9% Similarity=0.063 Sum_probs=45.8
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCc---EEEcCEEEEccCHHhh
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYLISSSFSYL 331 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~---~i~a~~VI~At~~~~~ 331 (342)
.+.+.|.+.+.+.|++|+++++|++|+.++++. .|++.+|+ +++||.||.|.+.++.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v--~v~~~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGV--TVEVRGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEE--EEEEEETTEEEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeE--EEEEEcCCCCEEEEeCEEEECCCcchH
Confidence 456667788888899999999999999865553 46666664 7999999999999864
No 74
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.27 E-value=1.9e-11 Score=114.99 Aligned_cols=58 Identities=21% Similarity=0.281 Sum_probs=47.7
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCE--EEEEecCCc-EEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTV--KNFLLTNGN-VIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~--~~v~t~~G~-~i~a~~VI~At~~~ 329 (342)
..+...+.+.++++|++|+++++|++|..++++.+ +.|++.+|+ ++.||.||+|++..
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 45677888889999999999999999987545532 357888887 89999999999755
No 75
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.27 E-value=5.4e-12 Score=114.81 Aligned_cols=59 Identities=15% Similarity=0.247 Sum_probs=49.0
Q ss_pred cccchHHHHHHHhc-CcEEEecceeeEEEEcCCCCEE-EEEecCCcEEEcCEEEEccCHHhh
Q 019346 272 ERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVK-NFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 272 ~~l~~~l~~~l~~~-Gv~i~~~t~V~~I~~~~~g~~~-~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
..+.+.|.+.+.+. |++|+++++|++|+.++++. . .|++.+|++++||.||.|++.++.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v-~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHA-IDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSC-EEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCce-EEEEEECCCCEEECCEEEECCCCChH
Confidence 46777788888888 99999999999999855553 2 478888889999999999998864
No 76
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.27 E-value=3.5e-11 Score=112.47 Aligned_cols=57 Identities=9% Similarity=-0.048 Sum_probs=46.3
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCc---EEEcCEEEEccCHHhh
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYLISSSFSYL 331 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~---~i~a~~VI~At~~~~~ 331 (342)
.+.+.|.+.+.+.|++|+++++|++|+.++++. .|++.+|+ +++||.||.|.+.++.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v--~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHV--VVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCE--EEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEE--EEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 566677888888899999999999999866654 36666664 7999999999999864
No 77
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.26 E-value=3.1e-11 Score=114.06 Aligned_cols=59 Identities=14% Similarity=0.184 Sum_probs=46.4
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCC--EEEEEecCC---cEEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGT--VKNFLLTNG---NVIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~--~~~v~t~~G---~~i~a~~VI~At~~~~ 330 (342)
..+...|.+.+.+.|++|+++++|++|+.++++. .+.+++.++ .+++||.||.|++.++
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 3567778888888999999999999999865510 224555554 6899999999999985
No 78
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.26 E-value=1.3e-11 Score=115.19 Aligned_cols=56 Identities=18% Similarity=0.265 Sum_probs=46.9
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
..+...+.+.++++|++|+++++|++|+.++++ + .|++.+|+++.||.||+|++..
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~-v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTENC-Y-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSS-E-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCE-E-EEEECCCcEEEcCEEEEeeCCC
Confidence 356777888888899999999999999875444 3 6888899899999999999764
No 79
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.25 E-value=2.7e-11 Score=115.32 Aligned_cols=59 Identities=20% Similarity=0.247 Sum_probs=49.1
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecC------C---------cEEEcCEEEEccCHHhh
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------G---------NVIDGDAYLISSSFSYL 331 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~------G---------~~i~a~~VI~At~~~~~ 331 (342)
.|.+.|.+.+++.|++|++++.|++|..++++.+.+|++.+ | .+++||.||.|++.++.
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 56777888888889999999999999986667776787763 3 58999999999998853
No 80
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.25 E-value=4.9e-11 Score=106.39 Aligned_cols=58 Identities=10% Similarity=-0.107 Sum_probs=44.8
Q ss_pred cchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEE-EEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 274 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKN-FLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 274 l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~-v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
+...+.+.+++.|++++++++|++|..++++ +. |++.+| ++.+|+||+||+.+....+
T Consensus 78 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~--~~~v~~~~g-~~~~d~vV~AtG~~~~~~~ 136 (357)
T 4a9w_A 78 VLAYLAQYEQKYALPVLRPIRVQRVSHFGER--LRVVARDGR-QWLARAVISATGTWGEAYT 136 (357)
T ss_dssp HHHHHHHHHHHTTCCEECSCCEEEEEEETTE--EEEEETTSC-EEEEEEEEECCCSGGGBCC
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEECCCc--EEEEEeCCC-EEEeCEEEECCCCCCCCCC
Confidence 3444666667779999999999999874333 35 888888 9999999999998765433
No 81
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.25 E-value=5e-12 Score=113.53 Aligned_cols=39 Identities=31% Similarity=0.335 Sum_probs=35.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
.++||+|||||++|+++|++|+++|++|+|+|+....+|
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 468999999999999999999999999999999876554
No 82
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.24 E-value=5e-11 Score=107.86 Aligned_cols=57 Identities=12% Similarity=0.178 Sum_probs=42.8
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEe-cCC--cEEEcCEEEEccCHHh
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNG--NVIDGDAYLISSSFSY 330 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t-~~G--~~i~a~~VI~At~~~~ 330 (342)
.+-..|.+.+.+.|++++++++|+++..+ ++.+..+.. .+| .+++||.||-|.+.++
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 44556778888889999999999999874 444444433 333 3689999999998875
No 83
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.24 E-value=1.3e-10 Score=105.53 Aligned_cols=45 Identities=2% Similarity=0.022 Sum_probs=38.1
Q ss_pred cCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 285 LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 285 ~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
.|++|+++++|++|+.++++. .|++.+|++++||.||.|++.++.
T Consensus 110 ~~~~i~~~~~v~~i~~~~~~v--~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSETV--QMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp CSTTEETTCCEEEEEECSSCE--EEEETTSCEEEESEEEECCCTTCH
T ss_pred CCcEEEcCCEEEEEEecCCEE--EEEECCCCEEECCEEEECCCcchh
Confidence 378999999999999865553 588888989999999999998754
No 84
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.23 E-value=3.7e-11 Score=113.21 Aligned_cols=60 Identities=8% Similarity=0.070 Sum_probs=46.1
Q ss_pred cchHHHHHHHhcCc--EEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhc
Q 019346 274 LCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKT 333 (342)
Q Consensus 274 l~~~l~~~l~~~Gv--~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~ 333 (342)
+...+.+.+.+.|+ .|+++++|+++..++++..+.|++.+|+++.||+||+||+.++...
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAIN 150 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCC
Confidence 33445555666677 8999999999998666556679999998899999999999754333
No 85
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.23 E-value=5e-11 Score=107.64 Aligned_cols=55 Identities=20% Similarity=0.322 Sum_probs=46.4
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
..+.+.|.+.+.+.|++|+++++|++|+. ++ .|++.+|++++||.||.|++.++.
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHH
Confidence 35677788888888999999999999986 44 478888888999999999998753
No 86
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.23 E-value=5.2e-11 Score=112.38 Aligned_cols=43 Identities=30% Similarity=0.434 Sum_probs=38.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
..++||+|||||++|+++|..|++.|++|+|+|+++.+||...
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~ 61 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWY 61 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 4567999999999999999999999999999999999988543
No 87
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.22 E-value=1.3e-10 Score=109.88 Aligned_cols=60 Identities=18% Similarity=0.288 Sum_probs=51.7
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
+..+...|.+.+.+.|++++.+ .|++|..++++.++.|++.+|++++||.||.|++.++.
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 4578888899998899999999 89999886667666788888888999999999999864
No 88
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.22 E-value=9.7e-12 Score=113.71 Aligned_cols=58 Identities=21% Similarity=0.252 Sum_probs=49.0
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
+..+...+.+.++++|++|++++.|++|.. +++.+..|++.+|+++.||.||+|++..
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 345667788888899999999999999987 4556668999999999999999999764
No 89
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.22 E-value=1.1e-10 Score=101.11 Aligned_cols=40 Identities=33% Similarity=0.425 Sum_probs=36.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCceEEEecCCCCCcc
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGK 95 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~-g~~v~vle~~~~~gG~ 95 (342)
.++||+|||||++|+++|+.|++. |.+|+|+|+.+.+||.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~ 78 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG 78 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc
Confidence 457999999999999999999997 9999999999888764
No 90
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.21 E-value=3e-11 Score=113.41 Aligned_cols=57 Identities=14% Similarity=0.081 Sum_probs=45.4
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEE--EecCCc--EEEcCEEEEccCHHh
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNF--LLTNGN--VIDGDAYLISSSFSY 330 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v--~t~~G~--~i~a~~VI~At~~~~ 330 (342)
.+.+.|.+.+.+.|++|+++++|++|..+ ++.+.+| .+.+|+ +++||.||.|++.++
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 56677888888899999999999999984 4444334 445674 899999999999885
No 91
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.21 E-value=3.4e-10 Score=107.15 Aligned_cols=60 Identities=18% Similarity=0.280 Sum_probs=52.0
Q ss_pred CcccchHHHHHHHhc-CcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 271 PERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~-Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
+..+...|.+.+++. |++++++ +|++|..++++.++.|++.+|+++.||.||.|++.++.
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 346888899999998 9999999 99999886667777899989988999999999998864
No 92
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.20 E-value=2.6e-11 Score=110.48 Aligned_cols=58 Identities=14% Similarity=0.234 Sum_probs=49.0
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
+..+...+.+.++++|++|+++++|++|..+ ++.+..|++.+|+++.||.||+|++..
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 3456777888888999999999999999873 455667999999999999999999764
No 93
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.20 E-value=4e-10 Score=107.44 Aligned_cols=60 Identities=13% Similarity=0.112 Sum_probs=47.7
Q ss_pred cccchHHHHHHHhcC-cEEEecceeeEEEEcCCCCEEEEEe---cCCc--EEEcCEEEEccCHHhhh
Q 019346 272 ERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYLISSSFSYLK 332 (342)
Q Consensus 272 ~~l~~~l~~~l~~~G-v~i~~~t~V~~I~~~~~g~~~~v~t---~~G~--~i~a~~VI~At~~~~~~ 332 (342)
..+...|.+.+.+.| ++|++++.|++|..+ ++.+.+|.. .+|+ ++.|+.||+||+.+...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 367788888888888 999999999999874 555555543 5675 69999999999988643
No 94
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.19 E-value=2.2e-11 Score=113.01 Aligned_cols=56 Identities=13% Similarity=0.218 Sum_probs=46.8
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEE-ecCCcEEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL-LTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~-t~~G~~i~a~~VI~At~~~ 329 (342)
..+.+.+.+.++++|++|+++++|++|+.++++. +.|+ +.+|+ +.||.||+|++..
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCcc
Confidence 4567778888999999999999999998755554 3688 88996 9999999999765
No 95
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.19 E-value=1.1e-10 Score=102.15 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=33.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
+.+||+|||||++|++||++|++.|++|+|+|+.. .||
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg 42 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRN 42 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGG
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCC
Confidence 56899999999999999999999999999999864 444
No 96
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.19 E-value=7.6e-11 Score=106.96 Aligned_cols=58 Identities=10% Similarity=0.117 Sum_probs=45.3
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEe-cCCc--EEEcCEEEEccCHHhh
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYLISSSFSYL 331 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t-~~G~--~i~a~~VI~At~~~~~ 331 (342)
.+.+.|.+.+.+.|++|+++++|++|+.++++.+ .|++ .+|+ +++||.||.|++.++.
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 4556677778788999999999999987433322 4666 6886 6999999999998864
No 97
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.18 E-value=6.1e-10 Score=104.87 Aligned_cols=60 Identities=18% Similarity=0.314 Sum_probs=50.4
Q ss_pred CcccchHHHHHHHh-cCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 271 PERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 271 ~~~l~~~l~~~l~~-~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
...+.+.|.+.+.+ .|++++++ .|++|..++++.++.|++.+|++++||.||.|++.++.
T Consensus 174 r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 174 AAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 34677888888888 89999999 59999886667766788888778999999999999864
No 98
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.18 E-value=1.7e-10 Score=109.02 Aligned_cols=42 Identities=26% Similarity=0.478 Sum_probs=38.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcce
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~ 96 (342)
+.++||+|||||++|+++|..|++.|++|+|+|+++.+||..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w 55 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVW 55 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 456899999999999999999999999999999999998864
No 99
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.18 E-value=1.8e-10 Score=106.85 Aligned_cols=57 Identities=18% Similarity=0.192 Sum_probs=44.4
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEe--cCCcEEEcCEEEEccCHHhh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t--~~G~~i~a~~VI~At~~~~~ 331 (342)
..+...|.+.+++.|++|+++++| +|..+ ++.+.+|.. .+| ++.||.||+||+.+..
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGL-VEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEE-ECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCC-eEEeeeEEECCCCCcc
Confidence 367788888887789999999999 99874 455555554 345 6889999999998753
No 100
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.18 E-value=7.9e-11 Score=111.06 Aligned_cols=42 Identities=38% Similarity=0.555 Sum_probs=38.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcce
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~ 96 (342)
...+||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw 48 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTW 48 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 346799999999999999999999999999999999998864
No 101
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.17 E-value=1.3e-10 Score=97.60 Aligned_cols=58 Identities=9% Similarity=0.003 Sum_probs=45.8
Q ss_pred ccchHHHHHHHhc-CcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhh
Q 019346 273 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLK 332 (342)
Q Consensus 273 ~l~~~l~~~l~~~-Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~ 332 (342)
.+...|.+.+++. |++++ +++|++|..+ ++.+..|++.+|++++||.||+|++.++..
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCSSC
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChhh
Confidence 4455677888886 99998 6899999874 445557888888889999999999986543
No 102
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.17 E-value=1.5e-10 Score=103.71 Aligned_cols=53 Identities=28% Similarity=0.314 Sum_probs=42.1
Q ss_pred hHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 276 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 276 ~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
..+.+.+.+.|+++++++.|++|..++++. +.|++.+|+++.+|+||+||+..
T Consensus 78 ~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 78 ESLWAQAERYNPDVVLNETVTKYTKLDDGT-FETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHTTCCEEECSCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHhCCEEEcCCEEEEEEECCCce-EEEEECCCcEEEeeEEEEccCCC
Confidence 345556666789999999999998754433 35888888889999999999885
No 103
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.17 E-value=3.9e-12 Score=113.71 Aligned_cols=51 Identities=10% Similarity=-0.029 Sum_probs=42.3
Q ss_pred CCcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhcC
Q 019346 270 PPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKTG 334 (342)
Q Consensus 270 ~~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~L 334 (342)
+|.++++.|.+.++++|++|+. ++|++|+.. + .++||.||+|+++|+..++
T Consensus 140 ~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~------------~-~~~a~~VV~A~G~~s~~l~ 190 (351)
T 3g3e_A 140 EGKNYLQWLTERLTERGVKFFQ-RKVESFEEV------------A-REGADVIVNCTGVWAGALQ 190 (351)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH------------H-HTTCSEEEECCGGGGGGTS
T ss_pred cHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh------------h-cCCCCEEEECCCcChHhhc
Confidence 3778999999999999999988 999888532 1 2679999999999987655
No 104
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.16 E-value=1.6e-11 Score=112.02 Aligned_cols=57 Identities=19% Similarity=0.254 Sum_probs=46.9
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
..+.+.+.+.++++|++|++++.|++|..+ +.+..|++.+|+++.||.||+|++...
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEECCCCEEEcCEEEEeeCCee
Confidence 345667788888899999999999999863 244578899999999999999997653
No 105
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.16 E-value=1.5e-10 Score=108.06 Aligned_cols=59 Identities=14% Similarity=0.159 Sum_probs=44.5
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcC-CCCEEEEEe--c-CC--cEEEcCEEEEccCHHhh
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLL--T-NG--NVIDGDAYLISSSFSYL 331 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~-~g~~~~v~t--~-~G--~~i~a~~VI~At~~~~~ 331 (342)
.+...|.+.+.+.|++|++++.|++|..++ ++..+.|++ . +| .+++||.||.|++.++.
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 455667777888899999999999998642 222335666 4 56 47999999999998864
No 106
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.16 E-value=2.1e-10 Score=106.10 Aligned_cols=58 Identities=17% Similarity=0.163 Sum_probs=45.9
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEec---CCc--EEEcCEEEEccCHHhh
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYLISSSFSYL 331 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~---~G~--~i~a~~VI~At~~~~~ 331 (342)
.+.+.|.+.+.+.|++|+++++|++|..+ ++.+.+|++. +|+ +++||.||.|++.++.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 56677888888889999999999999874 4445445443 675 7999999999998864
No 107
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.16 E-value=5e-10 Score=98.26 Aligned_cols=40 Identities=35% Similarity=0.443 Sum_probs=36.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCcc
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGK 95 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~--g~~v~vle~~~~~gG~ 95 (342)
.++||+|||||++|+++|+.|+++ |++|+|+|+...+||.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg 119 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGG 119 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCc
Confidence 468999999999999999999997 9999999999887764
No 108
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.16 E-value=4e-11 Score=112.02 Aligned_cols=42 Identities=26% Similarity=0.412 Sum_probs=37.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
.++||+|||||++|++||..|++.|++|+|+|+++..||.+.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 468999999999999999999999999999999999999653
No 109
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.15 E-value=2.1e-10 Score=101.57 Aligned_cols=40 Identities=28% Similarity=0.413 Sum_probs=36.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcce
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~ 96 (342)
.+||+|||||++|+++|+.|++.|++|+|+|+.+..||.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL 44 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 5799999999999999999999999999999998888754
No 110
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.15 E-value=8.3e-11 Score=103.45 Aligned_cols=51 Identities=20% Similarity=0.168 Sum_probs=39.4
Q ss_pred hHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 276 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 276 ~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
..+.+.+.+.|+++++ +.|++|..+++.+ .|++.+|+++.+|+||+||+..
T Consensus 74 ~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~--~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 74 KVFNKHIEKYEVPVLL-DIVEKIENRGDEF--VVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHTTTCCEEE-SCEEEEEEC--CE--EEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHcCCEEEE-EEEEEEEecCCEE--EEEECCCCEEEcCEEEECcCCC
Confidence 3455566667899988 9999998754443 5888888899999999999877
No 111
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.13 E-value=2e-10 Score=101.50 Aligned_cols=40 Identities=30% Similarity=0.401 Sum_probs=37.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcce
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~ 96 (342)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 4799999999999999999999999999999999988754
No 112
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.13 E-value=2.3e-10 Score=108.00 Aligned_cols=57 Identities=11% Similarity=-0.003 Sum_probs=46.8
Q ss_pred ccchHHHHHHHh-cCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 273 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 273 ~l~~~l~~~l~~-~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
.+...|.+.+++ .|++| +++.|++|.. +++.+.+|++.+|.++.|+.||+||+.+..
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 456677788877 49999 6889999987 456677899999989999999999998743
No 113
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.13 E-value=7.1e-11 Score=109.18 Aligned_cols=56 Identities=9% Similarity=0.100 Sum_probs=45.9
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
..+...+.+.++++|++|+++++|++|+.. ++.+ .|++.+| ++.||.||+|++...
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESSC-EEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECCC-EEEeCEEEECcCCCC
Confidence 456677888888999999999999999864 3444 6888888 999999999997653
No 114
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.13 E-value=1.9e-10 Score=103.28 Aligned_cols=55 Identities=11% Similarity=0.010 Sum_probs=43.0
Q ss_pred cchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 274 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 274 l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
+...+.+.+.+.|++++++++|++|..+++++ .|++.+| ++.+|+||+||+.+..
T Consensus 90 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~--~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 90 YAEYLQVVANHYELNIFENTVVTNISADDAYY--TIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSSE--EEEESSC-CEEEEEEEECCCSTTS
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEECCCeE--EEEeCCC-EEEeCEEEECCCCCCc
Confidence 34445566677899999999999998754443 4778888 7999999999998753
No 115
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.13 E-value=4.4e-10 Score=106.46 Aligned_cols=57 Identities=7% Similarity=0.054 Sum_probs=46.9
Q ss_pred ccchHHHHHHHh-cCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 273 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 273 ~l~~~l~~~l~~-~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
.+...|.+.+++ .|++| +++.|++|.. +++.+.+|++.+|.++.||.||+||+.+..
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 456677788877 59999 6889999987 456677899999988999999999998754
No 116
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.12 E-value=6.5e-11 Score=110.51 Aligned_cols=58 Identities=22% Similarity=0.321 Sum_probs=47.4
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
..+...+.+.++++|++|+++++|++|..++++. ..|++.+|+++.||.||+|++...
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCcEEEcCEEEEccCCCc
Confidence 3566778888899999999999999998754443 368888888899999999997653
No 117
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.11 E-value=1.1e-09 Score=105.22 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=46.6
Q ss_pred ccchHHHHHHHhc-Cc-EEEecceeeEEEEcCC--CCEEEEEe---cCCc--EEEcCEEEEccCHHhh
Q 019346 273 RLCLPIVEHIQSL-GG-EVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYLISSSFSYL 331 (342)
Q Consensus 273 ~l~~~l~~~l~~~-Gv-~i~~~t~V~~I~~~~~--g~~~~v~t---~~G~--~i~a~~VI~At~~~~~ 331 (342)
.+...|.+.+++. |+ +|+++++|++|..+++ +.+.+|.. .+|+ ++.|+.||+||+.+..
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccc
Confidence 5667788888887 99 9999999999987544 26767654 4564 6899999999998864
No 118
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.10 E-value=1.4e-10 Score=108.52 Aligned_cols=57 Identities=19% Similarity=0.265 Sum_probs=47.0
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
..+...+.+.++++|++|+++++|++|+.++++ + .|++.+|+++.||.||+|++...
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~-v-~v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTRTGAG-V-LVTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSS-E-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCE-E-EEEECCCcEEEcCEEEECCCCCc
Confidence 356677888889999999999999999874444 3 57788888899999999998764
No 119
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.10 E-value=3.9e-10 Score=104.95 Aligned_cols=56 Identities=13% Similarity=0.179 Sum_probs=43.8
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCC---cEEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G---~~i~a~~VI~At~~~ 329 (342)
..+...+.+.+++.|++|+++++|++|+.++++. .|++.++ +++.+|.||+|++..
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~--~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQV--TVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCE--EEEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEE--EEEEEeCCCcEEEECCEEEEeeCCc
Confidence 4567778888889999999999999998754443 3555543 589999999999754
No 120
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.09 E-value=1.5e-09 Score=98.64 Aligned_cols=40 Identities=28% Similarity=0.318 Sum_probs=35.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..++||+|||||++|+++|..|++.|++|+|+|+.+..+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 63 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREA 63 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccc
Confidence 3567999999999999999999999999999999876543
No 121
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.09 E-value=4.1e-10 Score=104.15 Aligned_cols=57 Identities=18% Similarity=0.230 Sum_probs=46.1
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
..+.+.+.+.++++|++++++++|++|+.++++ +.+++.+|+++.+|.||+|++...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~--v~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKG--ARVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCCeEEEcCEEEECcCCCc
Confidence 356677888888899999999999999874433 357777888999999999997664
No 122
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.09 E-value=1.2e-10 Score=105.92 Aligned_cols=45 Identities=11% Similarity=0.223 Sum_probs=38.0
Q ss_pred CcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 286 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 286 Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
+..|+++++|++++..+++.+ .|++.+|++++||.||-|-+.++.
T Consensus 123 ~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGADGSNSK 167 (412)
T ss_dssp TTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECCCTTCH
T ss_pred cceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEECCCCCcc
Confidence 557899999999988666644 688999999999999999988754
No 123
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.09 E-value=3.2e-09 Score=92.59 Aligned_cols=41 Identities=34% Similarity=0.430 Sum_probs=37.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCcce
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGKI 96 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~--g~~v~vle~~~~~gG~~ 96 (342)
.++||+|||||++|+++|+.|++. |++|+|+|+.+.+||.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 457999999999999999999998 99999999999887643
No 124
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.08 E-value=6.3e-10 Score=101.47 Aligned_cols=56 Identities=20% Similarity=0.319 Sum_probs=42.8
Q ss_pred ccchHHHHHHHhc-C-cEEEecceeeEEEEcCCCCEEEEEecC---C--cEEEcCEEEEccCHHhh
Q 019346 273 RLCLPIVEHIQSL-G-GEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYLISSSFSYL 331 (342)
Q Consensus 273 ~l~~~l~~~l~~~-G-v~i~~~t~V~~I~~~~~g~~~~v~t~~---G--~~i~a~~VI~At~~~~~ 331 (342)
.|.+.|.+.+.+. | ++|+++++|++|+. +++. .|++.+ | .+++||.||.|++.++.
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v--~v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGR--VLIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTE--EEEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCcc--EEEEecCCCCCceEEecCEEEECCCccch
Confidence 4566677777763 6 58999999999988 5664 355544 7 58999999999998754
No 125
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.08 E-value=3.8e-10 Score=98.88 Aligned_cols=42 Identities=38% Similarity=0.612 Sum_probs=37.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEE-EecCCCCCcceee
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEARDVLGGKIAA 98 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~v-le~~~~~gG~~~~ 98 (342)
..+||+|||||++|++||..|++.|++|+| +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 457999999999999999999999999999 999 677887643
No 126
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.07 E-value=7.9e-10 Score=106.15 Aligned_cols=59 Identities=8% Similarity=0.130 Sum_probs=47.2
Q ss_pred cccchHHHHHHHhc--CcEEEecceeeEEEEcCC--CCEEEEEe---cCCc--EEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSL--GGEVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~--Gv~i~~~t~V~~I~~~~~--g~~~~v~t---~~G~--~i~a~~VI~At~~~~ 330 (342)
..+...|.+.+++. |++|++++.|+++..+++ |.+.+|.. .+|+ .++|+.||+||+.+.
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 36777888888887 999999999999988544 47777754 3453 689999999998875
No 127
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.07 E-value=2.2e-09 Score=100.47 Aligned_cols=57 Identities=14% Similarity=0.102 Sum_probs=46.3
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcE-EEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~-i~a~~VI~At~~~ 329 (342)
..+...+.+.++++|+++++++.|++|+.++++. ..|++.+|++ +.+|.||+|++..
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCC
Confidence 3566777888889999999999999998754443 3578888877 9999999999754
No 128
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.07 E-value=9.4e-11 Score=114.45 Aligned_cols=97 Identities=19% Similarity=0.239 Sum_probs=72.3
Q ss_pred CCccchh--hhhccccCCCCCCeeeccCCCCCCc----------ccccchHHHhhhcCCC--CCCCCCCCCCeEEEECCC
Q 019346 1 MGQSLKI--RVKTGTRKGFCPSKVVCVDYPRPDI----------DNTSNFLEAAYLSSSF--RTSPRPSKPLKVVIAGAG 66 (342)
Q Consensus 1 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~--~~~~~~~~~~dv~IiG~G 66 (342)
|||++++ +|+++...|....+..|+.|+. |. .|..++.......... ....+....+||+|||||
T Consensus 320 ~gR~~l~~P~~~~~~~~g~~~~~~~ci~Cn~-C~~~~~~~~~~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG 398 (729)
T 1o94_A 320 CARPSIADPFLPQKVEQGRYDDIRVCIGCNV-CISRWEIGGPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAG 398 (729)
T ss_dssp ESHHHHHCTTHHHHHHTTCGGGCCCCCCCCH-HHHHHHHSSSCCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCS
T ss_pred eCchhhcCchHHHHHHcCCccccccccccch-hcccccccCCceeeccCccccccccccccccccccccCCceEEEECCC
Confidence 6999999 6999999999888889999873 32 2333333222111011 111233456899999999
Q ss_pred HHHHHHHHHHHHcCCceEEEecCCCCCcceee
Q 019346 67 LAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (342)
Q Consensus 67 ~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~ 98 (342)
++|++||+.|+++|++|+|+|+.+.+||.+..
T Consensus 399 pAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 399 PSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 99999999999999999999999999998754
No 129
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.07 E-value=1.3e-09 Score=100.51 Aligned_cols=56 Identities=18% Similarity=0.237 Sum_probs=45.9
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
.+.+.+.+.++++|++++++++|++|+.++++. ..|++.+|+++.||.||+|++..
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCC
Confidence 456777888888999999999999998754443 36888889889999999999654
No 130
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.06 E-value=1.7e-09 Score=100.24 Aligned_cols=55 Identities=18% Similarity=0.283 Sum_probs=45.6
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCc-EEEcCEEEEccCHH
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYLISSSFS 329 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~-~i~a~~VI~At~~~ 329 (342)
.+...+.+.++++|++++++++|++|+.++++ ..|++.+|+ ++.+|.||+|++..
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCC
Confidence 45667778888899999999999999874444 368888998 79999999999754
No 131
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.05 E-value=2.6e-09 Score=101.99 Aligned_cols=54 Identities=20% Similarity=0.305 Sum_probs=44.5
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
..+...+.+.+++.|++|+++++|++|+.+++ .|++.+|+++.||.||+|++..
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~----~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENGA----VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT----EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCCC----EEEECCCCEEEcCEEEEccCCC
Confidence 35667788888899999999999999975322 3777888899999999999754
No 132
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.04 E-value=2.2e-09 Score=99.74 Aligned_cols=56 Identities=18% Similarity=0.305 Sum_probs=46.1
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
..+...+.+.+++.|++|+++++|++|+.+ ++.+ .|++.+|+++.||.||+|++..
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NGKV-ARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBE-EEEEESSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CCeE-EEEEeCCCEEEcCEEEECCCCC
Confidence 456677888888999999999999999873 4444 3778888899999999999765
No 133
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.04 E-value=2.3e-10 Score=106.24 Aligned_cols=41 Identities=34% Similarity=0.520 Sum_probs=38.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
++||+|||||++|++||..|++.|++|+|+|+.+.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 57999999999999999999999999999999988998754
No 134
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.04 E-value=2.6e-10 Score=106.19 Aligned_cols=58 Identities=17% Similarity=0.133 Sum_probs=45.0
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecC-------CcEEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-------GNVIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~-------G~~i~a~~VI~At~~~ 329 (342)
..+...+.+.++++|++|++++.|++|+.++++..+.|++.+ |+++.+|.||+|++..
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 356667788888999999999999999875566333566654 2579999999999754
No 135
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.03 E-value=1.6e-09 Score=102.42 Aligned_cols=61 Identities=25% Similarity=0.231 Sum_probs=45.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCCCc
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~~ 132 (342)
.++||+|||||++|+++|..|++.|.+|+|+|+.+..+..... . ...+...++++++|+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~------------~----~l~~~~~~~l~~lGl~~ 85 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRV------------G----TIGPRSMELFRRWGVAK 85 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCC------------C----EECHHHHHHHHHTTCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCce------------e----eeCHHHHHHHHHcCChH
Confidence 4579999999999999999999999999999998765432111 0 11344567778888754
No 136
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.03 E-value=7.8e-10 Score=102.51 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=35.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcC-----CceEEEecCCCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAG-----HKPLLLEARDVLG 93 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g-----~~v~vle~~~~~g 93 (342)
..+||+|||||++|+++|..|++.| .+|+|||+.+..|
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 4579999999999999999999999 9999999998876
No 137
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.03 E-value=5.5e-10 Score=103.03 Aligned_cols=42 Identities=38% Similarity=0.427 Sum_probs=38.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCCCCCccee
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLGGKIA 97 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~~~gG~~~ 97 (342)
..+||+|||||++|+++|..|++.|. +|+|+|+.+.+||...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 45799999999999999999999999 9999999999988654
No 138
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.03 E-value=6.3e-10 Score=97.79 Aligned_cols=56 Identities=11% Similarity=0.151 Sum_probs=42.7
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecC----C--cEEEcCEEEEccCHH
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----G--NVIDGDAYLISSSFS 329 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~----G--~~i~a~~VI~At~~~ 329 (342)
.+.+.+.+.+++.|++|+++++|++|..+ ++.+.+|++.+ | +++.||.||+|++..
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 34556677778889999999999999874 33454566544 4 589999999999755
No 139
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.02 E-value=1.7e-10 Score=107.71 Aligned_cols=56 Identities=21% Similarity=0.359 Sum_probs=46.3
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
.+...+.+.++++|++|++++.|++|..++++. ..|++.+|+++.||.||+|++..
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECCCcEEEcCEEEECCCCc
Confidence 456778888889999999999999998754443 36888899889999999999654
No 140
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.02 E-value=2.8e-10 Score=110.32 Aligned_cols=94 Identities=20% Similarity=0.275 Sum_probs=71.7
Q ss_pred CCccchh--hhhccccCCCCCCeeeccCCCCCCcc---------cccchHHHhhhcCCCCCCCCCCCCCeEEEECCCHHH
Q 019346 1 MGQSLKI--RVKTGTRKGFCPSKVVCVDYPRPDID---------NTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAG 69 (342)
Q Consensus 1 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~dv~IiG~G~~G 69 (342)
|||++++ +|+++...+....+..|+.|+..|.+ |..+.....+ ...+..+....+||+|||||++|
T Consensus 309 ~gR~~l~~P~l~~k~~~g~~~~~~~c~~c~~~C~~~~~~~~~~~C~~np~~~~e---~~~~~~~~~~~~~vvIIGgG~AG 385 (671)
T 1ps9_A 309 MARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRACHE---TKMPILPAVQKKNLAVVGAGPAG 385 (671)
T ss_dssp ESTHHHHCTTHHHHHHTTCGGGCCCCCCCCTTTHHHHHTTCCCCCSSCTTTTCT---TTSCCCSCSSCCEEEEECCSHHH
T ss_pred eCHHHHhCcHHHHHHHcCCCCCcccccccccccchhccCCCceEEEeCcccccc---cccCCCCCCCCCeEEEECCCHHH
Confidence 6899999 69999999999999999999876532 2222211111 11111233456899999999999
Q ss_pred HHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 70 LSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 70 ~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
++||..|++.|++|+|+|+++..||...
T Consensus 386 l~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 386 LAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp HHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 9999999999999999999999998764
No 141
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.02 E-value=4.6e-10 Score=104.46 Aligned_cols=57 Identities=18% Similarity=0.166 Sum_probs=46.2
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCC-cEEEcCEEEEccCHH
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYLISSSFS 329 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G-~~i~a~~VI~At~~~ 329 (342)
.+...+.+.++++|++|+++++|++|+.++++....|++.+| +++.||.||+|++..
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 466677888888999999999999998754553346888888 789999999999754
No 142
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.02 E-value=3.1e-09 Score=85.25 Aligned_cols=53 Identities=19% Similarity=0.171 Sum_probs=42.9
Q ss_pred cchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 274 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 274 l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
+.+.+.+.+++.|++++++ +|++|+.++++ +.|++.+| ++.||.||+|++...
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMGGV--FEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECSSS--EEEECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE--EEEEECCC-EEEECEEEECCCCCC
Confidence 3445677778889999999 99999875444 35888888 999999999998764
No 143
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.02 E-value=1.5e-09 Score=95.65 Aligned_cols=40 Identities=43% Similarity=0.622 Sum_probs=36.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcce
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~ 96 (342)
..+||+|||||++|+++|..|++.|++|+|+|+. .+||.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 46 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI 46 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc
Confidence 4579999999999999999999999999999998 667754
No 144
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.01 E-value=7.4e-10 Score=101.65 Aligned_cols=58 Identities=16% Similarity=0.219 Sum_probs=46.9
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEc-CCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN-DDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~-~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
..+...+.+.++++|++++++++|++|..+ +++.+..|++.+|+++.||.||+|++..
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 345667788888899999999999999862 2455557888899899999999999754
No 145
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.00 E-value=3.4e-09 Score=98.92 Aligned_cols=51 Identities=16% Similarity=0.212 Sum_probs=41.6
Q ss_pred HHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 278 l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
+.+.++++|++|++++.|++|..+ +.+..|++.+|+++.||.||+|++...
T Consensus 263 le~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 263 VIQELERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHHHhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 347788889999999999999853 334467888888999999999997653
No 146
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.00 E-value=1.5e-09 Score=95.00 Aligned_cols=38 Identities=37% Similarity=0.643 Sum_probs=34.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCCCCcce
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~~gG~~ 96 (342)
+||+|||||++|+++|..|++.|+ +|+|+|+. .+||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~ 40 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQI 40 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccc
Confidence 699999999999999999999999 99999995 566644
No 147
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.00 E-value=1.3e-09 Score=95.83 Aligned_cols=41 Identities=44% Similarity=0.664 Sum_probs=36.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
.++||+|||||++|+++|+.|++.|++|+|+|+ ..+||.+.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~ 55 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTA 55 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCcccc
Confidence 457999999999999999999999999999999 56777654
No 148
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.99 E-value=3.3e-10 Score=105.39 Aligned_cols=42 Identities=29% Similarity=0.430 Sum_probs=38.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
.++||+|||||++|+++|..|++.|++|+|+|+.+.+||.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCL 46 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccc
Confidence 468999999999999999999999999999999988998753
No 149
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.99 E-value=3.6e-09 Score=97.95 Aligned_cols=41 Identities=22% Similarity=0.421 Sum_probs=37.9
Q ss_pred CeEEEECCCHHHHHHHHHHHH---cCCc---eEEEecCCCCCcceee
Q 019346 58 LKVVIAGAGLAGLSTAKYLAD---AGHK---PLLLEARDVLGGKIAA 98 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~---~g~~---v~vle~~~~~gG~~~~ 98 (342)
+||+|||||++|++||..|++ .|++ |+|+|+.+.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999987643
No 150
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.98 E-value=1.7e-09 Score=104.10 Aligned_cols=59 Identities=12% Similarity=0.124 Sum_probs=44.9
Q ss_pred ccchHHHHHHHhcCc--EEEecceeeEEEEcCC--CCEEEEEec------CC--cEEEcCEEEEccCHHhh
Q 019346 273 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDD--GTVKNFLLT------NG--NVIDGDAYLISSSFSYL 331 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv--~i~~~t~V~~I~~~~~--g~~~~v~t~------~G--~~i~a~~VI~At~~~~~ 331 (342)
.+...|.+.+.+.|+ +|+++++|++|+.+++ +..+.|++. +| ++++||.||.|.+.++.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 566778888888887 9999999999998543 222345443 46 57999999999999864
No 151
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.98 E-value=2.1e-09 Score=99.76 Aligned_cols=56 Identities=16% Similarity=0.202 Sum_probs=44.7
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
..+.+.+.+.++++|++|+++++|++|..+ ++ ...|++.++ ++.||.||+|++.+.
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~~~-~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHM-DG-EFVLTTTHG-ELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEE-TT-EEEEEETTE-EEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CC-EEEEEECCc-EEEcCEEEECCCCCc
Confidence 456777888899999999999999999863 33 335777654 899999999997764
No 152
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.96 E-value=1.6e-09 Score=102.56 Aligned_cols=59 Identities=10% Similarity=0.151 Sum_probs=46.2
Q ss_pred ccchHHHHHHHhc-CcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhhhc
Q 019346 273 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYLKT 333 (342)
Q Consensus 273 ~l~~~l~~~l~~~-Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~~~ 333 (342)
.+...|.+.+++. |++|+ ++.|++|.. +++.+.+|++.+|+++.||.||+||+.+...+
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~ 177 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTFLNGL 177 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTCBTCE
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCCCCcc
Confidence 4566677777774 89994 669999987 35556678899998999999999999885433
No 153
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.95 E-value=1.7e-09 Score=94.69 Aligned_cols=52 Identities=12% Similarity=0.206 Sum_probs=40.0
Q ss_pred HHHHHHhcCcEEEecceeeEEEEcCC-CCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 278 IVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 278 l~~~l~~~Gv~i~~~t~V~~I~~~~~-g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
+.+.+.+.|++++++++|++|..+.+ +..+.|++.+|+++.+|+||+||+.+
T Consensus 62 ~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 62 LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 44555667899999999999976422 22346888888889999999999875
No 154
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.95 E-value=4.2e-09 Score=98.10 Aligned_cols=57 Identities=14% Similarity=0.067 Sum_probs=44.5
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCc-----EEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-----VIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~-----~i~a~~VI~At~~~ 329 (342)
..+...+.+.++++|++|++++.|++|+.++++.+ .|++.+++ ++.+|.||+|++..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccc
Confidence 35667778888899999999999999987555543 46665553 79999999999653
No 155
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.95 E-value=2.9e-09 Score=92.39 Aligned_cols=34 Identities=38% Similarity=0.535 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.+||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4799999999999999999999999999999865
No 156
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.94 E-value=5.4e-09 Score=91.51 Aligned_cols=35 Identities=34% Similarity=0.443 Sum_probs=32.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
.+||+|||||++|++||..|++.|++|+|+|+...
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 58999999999999999999999999999998643
No 157
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.94 E-value=7.7e-10 Score=102.23 Aligned_cols=56 Identities=20% Similarity=0.287 Sum_probs=44.2
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
..+...+.+.++++|++|+++++|++|..+ ++.+..|++ +|+++.||.||+|++..
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEIITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEEEEET-TSCEEEESEEEECCCEE
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEEEEEe-CCCEEECCEEEECcCCC
Confidence 356677788888999999999999999863 444434555 67799999999999754
No 158
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.93 E-value=2.5e-09 Score=94.53 Aligned_cols=51 Identities=12% Similarity=0.202 Sum_probs=38.6
Q ss_pred hHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 276 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 276 ~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
..+.+.+.+.|+++++++ |++|..+.+++ .|++ +|+++++|+||+||+.+.
T Consensus 74 ~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~--~v~~-~~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 74 DKFRKQSERFGTTIFTET-VTKVDFSSKPF--KLFT-DSKAILADAVILAIGAVA 124 (333)
T ss_dssp HHHHHHHHHTTCEEECCC-CCEEECSSSSE--EEEC-SSEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHCCCEEEEeE-EEEEEEcCCEE--EEEE-CCcEEEcCEEEECCCCCc
Confidence 345555667799999887 99998744432 4666 777999999999999873
No 159
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.91 E-value=1.1e-08 Score=97.15 Aligned_cols=57 Identities=16% Similarity=0.337 Sum_probs=45.1
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEc------------------CCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN------------------DDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~------------------~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
..+...+.+.+++.|+++++++.|++|..+ +++. ..+++.+|+++.||.||+|++..
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH-LSLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE-EEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCc-EEEEEcCCCEEEcCEEEECcCCc
Confidence 355667778888899999999999999863 2333 35677888899999999999764
No 160
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.90 E-value=5e-09 Score=97.47 Aligned_cols=41 Identities=37% Similarity=0.456 Sum_probs=37.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
++||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 45 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCL 45 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccc
Confidence 57999999999999999999999999999999888888654
No 161
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.90 E-value=3.4e-09 Score=97.99 Aligned_cols=41 Identities=27% Similarity=0.412 Sum_probs=37.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
.++||+|||||++|++||..|++.|++|+|+|+ +..||.+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 458999999999999999999999999999999 77888754
No 162
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.89 E-value=5e-09 Score=98.44 Aligned_cols=53 Identities=13% Similarity=0.243 Sum_probs=40.9
Q ss_pred HHHHHHHhcCcEEEecceeeEEEEcCC-CCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 277 PIVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 277 ~l~~~l~~~Gv~i~~~t~V~~I~~~~~-g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
.+.+.+.+.|++++++++|++|..+.+ +..+.|++.+|+++.+|+||+||+.+
T Consensus 272 ~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 272 ALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 345556677999999999999975322 22346888888899999999999975
No 163
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.89 E-value=7.7e-09 Score=91.54 Aligned_cols=40 Identities=35% Similarity=0.574 Sum_probs=34.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcc
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGK 95 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~ 95 (342)
...+||+|||||++|+++|..|++.|++|+|+|+. .+||.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 51 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGA 51 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCc
Confidence 45689999999999999999999999999999975 45553
No 164
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.89 E-value=6.7e-10 Score=100.42 Aligned_cols=57 Identities=16% Similarity=0.244 Sum_probs=46.9
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
..+...+.+.++++|++|+++++|++|+.++++ ..|++.+|+++.||.||+|++...
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEG--LEAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCE--EEEEECCCCEEECCEEEECcCCCc
Confidence 456678888888999999999999999874333 368888898999999999997653
No 165
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.89 E-value=7.2e-09 Score=95.99 Aligned_cols=55 Identities=18% Similarity=0.210 Sum_probs=43.0
Q ss_pred ccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEec-C--Cc--EEEcCEEEEccCHH
Q 019346 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GN--VIDGDAYLISSSFS 329 (342)
Q Consensus 273 ~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~-~--G~--~i~a~~VI~At~~~ 329 (342)
.+...+.+.++++|+++++++.|++|+.++++ +.|++. + |+ ++.+|.||+|++..
T Consensus 211 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 211 ETAALLRRALEKEGIRVRTKTKAVGYEKKKDG--LHVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTE--EEEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCE--EEEEEeecCCCceeEEEcCEEEECCCcc
Confidence 45667778888899999999999999874333 246654 6 76 89999999999654
No 166
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.89 E-value=2.8e-09 Score=100.09 Aligned_cols=55 Identities=11% Similarity=-0.002 Sum_probs=45.5
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSF 328 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~ 328 (342)
..+...+.+.++++|+++++++.|.+++..+++ +.|++.+++++.+|.|++|++-
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~--~~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDK--ILVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecCCe--EEEEEcCCCeEEEEEEEEcccc
Confidence 356778888999999999999999999875443 2577888889999999999953
No 167
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.89 E-value=9.2e-09 Score=93.69 Aligned_cols=52 Identities=15% Similarity=0.254 Sum_probs=43.0
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
..+...+.+.+++.|++++++++|++|+. + .|++.+|+++.+|.||+|++..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEECCCCEEeeeEEEECCCCC
Confidence 35667778888889999999999999963 2 2778889899999999999754
No 168
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.89 E-value=1.2e-08 Score=94.72 Aligned_cols=43 Identities=37% Similarity=0.465 Sum_probs=39.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
..++||+|||||++|+++|..|++.|++|+|+|+.+.+||.+.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 3568999999999999999999999999999999988888654
No 169
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.87 E-value=1e-08 Score=92.55 Aligned_cols=46 Identities=17% Similarity=0.143 Sum_probs=37.4
Q ss_pred HHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 280 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 280 ~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
+.+.++|++++++++|++|..+ ++ .|++.+|+++.+|+||+||+..
T Consensus 70 ~~~~~~~i~~~~~~~V~~id~~-~~---~v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 70 DWYEKNNIKVITSEFATSIDPN-NK---LVTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp HHHHHTTCEEECSCCEEEEETT-TT---EEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHCCCEEEeCCEEEEEECC-CC---EEEECCCCEEECCEEEEecCCC
Confidence 3345668999999999999863 33 3888999899999999999863
No 170
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.86 E-value=1.3e-08 Score=94.65 Aligned_cols=41 Identities=37% Similarity=0.466 Sum_probs=37.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
++||+|||||++|+++|..|++.|++|+|+|+.+..||.+.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 57999999999999999999999999999999888888653
No 171
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.84 E-value=1.3e-09 Score=99.38 Aligned_cols=52 Identities=19% Similarity=0.256 Sum_probs=43.6
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
..+...+.+.++++|++|+++++|++|+ + + .|++.+|+++.||.||+|++..
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECCCCEEEcCEEEECcCCC
Confidence 3566777888889999999999999998 2 3 4778888899999999999754
No 172
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.84 E-value=8.5e-10 Score=102.99 Aligned_cols=57 Identities=21% Similarity=0.278 Sum_probs=46.6
Q ss_pred cccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 272 ~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
..+...+.+.++++|+++++++.|++|..+ ++.+ .|++.+|+++.||.||+|++...
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCc
Confidence 456677788888999999999999999863 3333 68888998999999999997653
No 173
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.83 E-value=1.1e-08 Score=95.36 Aligned_cols=39 Identities=26% Similarity=0.401 Sum_probs=36.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcce
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~ 96 (342)
++||+|||||++|++||..|++.|++|+|+|+. ..||.+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcc
Confidence 589999999999999999999999999999996 488865
No 174
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.83 E-value=6.4e-08 Score=90.87 Aligned_cols=36 Identities=33% Similarity=0.471 Sum_probs=33.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..++||+|||||++|++||..|++.|++|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 456899999999999999999999999999999965
No 175
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.81 E-value=5.1e-08 Score=90.87 Aligned_cols=34 Identities=26% Similarity=0.453 Sum_probs=32.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEec
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~ 88 (342)
..++||+|||||++|++||..|++.|++|+|+|+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk 37 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADY 37 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEe
Confidence 3568999999999999999999999999999998
No 176
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.80 E-value=1.2e-08 Score=94.68 Aligned_cols=42 Identities=36% Similarity=0.423 Sum_probs=38.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceee
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~ 98 (342)
++||+|||||++|+++|..|++.|++|+|+|+++.+||.+..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 579999999999999999999999999999999999987643
No 177
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.79 E-value=4.2e-08 Score=90.07 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=44.9
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
...+.+.+.+.++++|+++++++.|++++. + .|++.+|+++.+|.||+|++..
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~--~----~v~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAING--N----EITFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEET--T----EEEETTSCEEECSEEEECCCEE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEecC--C----eeeecCCeEEeeeeEEEEecee
Confidence 456788899999999999999999999852 2 3778899999999999999754
No 178
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.78 E-value=2.4e-08 Score=91.55 Aligned_cols=39 Identities=31% Similarity=0.448 Sum_probs=35.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCceEEEecCCCCCcc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLGGK 95 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~--~g~~v~vle~~~~~gG~ 95 (342)
.+||+|||||++|+++|+.|++ .|++|+|+|+++..++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 3699999999999999999999 78999999999876553
No 179
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.77 E-value=3.8e-08 Score=93.04 Aligned_cols=37 Identities=32% Similarity=0.574 Sum_probs=33.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHc-CCceEEEecCC
Q 019346 54 PSKPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (342)
Q Consensus 54 ~~~~~dv~IiG~G~~G~~~A~~l~~~-g~~v~vle~~~ 90 (342)
...++|+||||||.+|+.+|.+|++. +.+|+|||+.+
T Consensus 16 ~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 16 SGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 34679999999999999999999975 79999999987
No 180
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.77 E-value=4e-08 Score=90.74 Aligned_cols=40 Identities=30% Similarity=0.414 Sum_probs=36.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
++||+|||||++|+++|..|++.|++|+|+|+. ..||.+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 579999999999999999999999999999998 7777653
No 181
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.77 E-value=4.2e-08 Score=90.83 Aligned_cols=39 Identities=31% Similarity=0.437 Sum_probs=35.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcce
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~ 96 (342)
++||+|||||++|+++|..|++.|++|+|+|+. ..||.+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVC 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcc
Confidence 479999999999999999999999999999997 667654
No 182
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.75 E-value=4.5e-09 Score=92.75 Aligned_cols=43 Identities=33% Similarity=0.366 Sum_probs=38.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHH--cCCceEEEecCCCCCccee
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~--~g~~v~vle~~~~~gG~~~ 97 (342)
..++||+|||||++||+||++|++ .|++|+|+|+.+.+||.+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 356899999999999999999985 4999999999999999764
No 183
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.74 E-value=5e-08 Score=94.13 Aligned_cols=61 Identities=26% Similarity=0.360 Sum_probs=44.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHH-----cCCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHHHHHHcCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLAD-----AGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIN 131 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~-----~g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~gi~ 131 (342)
++||+|||||++||++|..|++ .|++|+|+|+++..... .+ + . ...+...++++.+|+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~-gr-----------a-~---~l~~~tle~l~~lGl~ 71 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYN-GQ-----------A-D---GLQCRTLESLKNLGLA 71 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCS-CS-----------C-C---EECHHHHHHHHTTTCH
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCC-Cc-----------e-e---EEChHHHHHHHHCCCH
Confidence 5799999999999999999999 99999999998643210 00 0 0 1134556788888875
Q ss_pred cc
Q 019346 132 DR 133 (342)
Q Consensus 132 ~~ 133 (342)
..
T Consensus 72 ~~ 73 (665)
T 1pn0_A 72 DK 73 (665)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 184
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.71 E-value=3.6e-09 Score=96.16 Aligned_cols=46 Identities=4% Similarity=-0.018 Sum_probs=38.2
Q ss_pred HHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 282 l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
++++|+++++++.|..++.+.++. .|++.+|+++.+|.||+++|..
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~~--~v~~~~g~~i~~D~vi~~~g~~ 257 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEAM--TVETSFGETFKAAVINLIPPQR 257 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred HHhcCcEEEeCceEEEEEecccce--EEEcCCCcEEEeeEEEEecCcC
Confidence 356799999999999998755554 4889999999999999998654
No 185
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.70 E-value=9.2e-08 Score=89.33 Aligned_cols=42 Identities=24% Similarity=0.181 Sum_probs=31.3
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 53 ~~~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
+.+.-+||||||+|++||++|..|.+.|...+++|+.+..++
T Consensus 35 p~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 35 PQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp CTTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred CCCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 344568999999999999999999988777777777666554
No 186
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.70 E-value=1.4e-07 Score=94.80 Aligned_cols=41 Identities=34% Similarity=0.602 Sum_probs=38.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
.+||+|||||++|++||..|++.|++|+|+|+.+.+||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 57999999999999999999999999999999999999876
No 187
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.67 E-value=1.8e-08 Score=88.27 Aligned_cols=42 Identities=33% Similarity=0.597 Sum_probs=37.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcceee
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~~ 98 (342)
.+|||+|||||++|++||..|++.|++|+|+|+. .+||.+..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~ 46 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMAN 46 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeec
Confidence 5799999999999999999999999999999984 67887654
No 188
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.67 E-value=2.9e-08 Score=93.91 Aligned_cols=37 Identities=32% Similarity=0.352 Sum_probs=33.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcC-CceEEEecCCC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDV 91 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g-~~v~vle~~~~ 91 (342)
..++|+||||||.+|+.+|..|++.+ .+|+|||+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 45699999999999999999999987 79999999765
No 189
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.65 E-value=1.6e-07 Score=87.78 Aligned_cols=59 Identities=14% Similarity=0.096 Sum_probs=44.9
Q ss_pred cchHHHHHHHhcC-cEEEecceeeEEEEcCCC-CEEEEEec--CC-----cEEEcCEEEEccCHHhhh
Q 019346 274 LCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYLISSSFSYLK 332 (342)
Q Consensus 274 l~~~l~~~l~~~G-v~i~~~t~V~~I~~~~~g-~~~~v~t~--~G-----~~i~a~~VI~At~~~~~~ 332 (342)
....+++.+.++| ++|++++.|++|..++++ .+++|++. +| .+++|+.||+|+++....
T Consensus 223 ~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~ 290 (504)
T 1n4w_A 223 LDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGST 290 (504)
T ss_dssp TTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCH
Confidence 3455566666665 999999999999986534 67788774 56 378999999999988443
No 190
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.62 E-value=1e-07 Score=87.93 Aligned_cols=37 Identities=32% Similarity=0.392 Sum_probs=33.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~--g~~v~vle~~~~~g 93 (342)
.+||+|||||++|+++|+.|++. |++|+|+|+.+..+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccc
Confidence 47999999999999999999998 78999999987544
No 191
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.62 E-value=7.4e-08 Score=89.90 Aligned_cols=55 Identities=16% Similarity=0.245 Sum_probs=43.3
Q ss_pred CcccchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCc----EEEcCEEEEccC
Q 019346 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYLISSS 327 (342)
Q Consensus 271 ~~~l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~----~i~a~~VI~At~ 327 (342)
+..+.+.+.+.|+++||+|++++.|++|+ +++....+.+.+|+ +|.||.||+|++
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~G 329 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATG 329 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCC
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccC
Confidence 35677778888999999999999999996 35544445556663 699999999986
No 192
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.60 E-value=2e-07 Score=83.58 Aligned_cols=34 Identities=32% Similarity=0.429 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..||+|||||++|++||..|++.| +|+|+|+.+.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 459999999999999999999999 9999999764
No 193
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.60 E-value=7.5e-08 Score=90.62 Aligned_cols=38 Identities=32% Similarity=0.430 Sum_probs=32.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-cCCceEEEecCCC
Q 019346 54 PSKPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDV 91 (342)
Q Consensus 54 ~~~~~dv~IiG~G~~G~~~A~~l~~-~g~~v~vle~~~~ 91 (342)
...+||+||||||.+|+..|.+|++ .|++|+|||+...
T Consensus 14 ~~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 14 HAPNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 3458999999999999999999998 5799999999754
No 194
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.58 E-value=5.5e-07 Score=82.91 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=32.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~--g~~v~vle~~~~~g 93 (342)
+||+|||||++|++||..|++. |++|+|+|+.+.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 5899999999999999999998 89999999987644
No 195
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.58 E-value=9.1e-08 Score=90.27 Aligned_cols=36 Identities=33% Similarity=0.335 Sum_probs=33.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHH-cCCceEEEecCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~-~g~~v~vle~~~~~ 92 (342)
++|+||||||.+|+.+|.+|++ .+.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999998 68999999998654
No 196
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.58 E-value=6.3e-08 Score=88.93 Aligned_cols=34 Identities=38% Similarity=0.623 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHH---cCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLAD---AGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~---~g~~v~vle~~~ 90 (342)
..||+|||||++|+++|..|++ .|++|+|+|+++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 3699999999999999999999 799999999876
No 197
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.57 E-value=4.9e-07 Score=83.99 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=32.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~--g~~v~vle~~~~~g 93 (342)
.+||+|||||++|+++|..|++. |.+|+|+|+.+..+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYS 74 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 46999999999999999999996 89999999987643
No 198
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.57 E-value=4.1e-07 Score=85.07 Aligned_cols=58 Identities=14% Similarity=0.116 Sum_probs=44.0
Q ss_pred cchHHHHHHHhcC-cEEEecceeeEEEEcCCC-CEEEEEec--CC-----cEEEcCEEEEccCHHhh
Q 019346 274 LCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYLISSSFSYL 331 (342)
Q Consensus 274 l~~~l~~~l~~~G-v~i~~~t~V~~I~~~~~g-~~~~v~t~--~G-----~~i~a~~VI~At~~~~~ 331 (342)
....++..+.++| ++|++++.|++|..++++ .+++|+.. +| .+++|+.||+|+++...
T Consensus 228 ~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 228 LDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp TTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHH
T ss_pred hHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCC
Confidence 3455566666664 999999999999986544 67788774 55 37899999999998844
No 199
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.57 E-value=1.6e-07 Score=86.08 Aligned_cols=51 Identities=18% Similarity=0.097 Sum_probs=37.6
Q ss_pred cchHHHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCC--cEEEcCEEEEccCH
Q 019346 274 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYLISSSF 328 (342)
Q Consensus 274 l~~~l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G--~~i~a~~VI~At~~ 328 (342)
..+.+.+.++++|+++++++.|++|+. ++. .+...+| +++.+|.||+|++.
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~~--~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP--DKV--IYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS--SEE--EEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEeC--Cce--EEEeeCCCceEeecceEEEeccC
Confidence 344566778888999999999999953 332 2444444 48999999999854
No 200
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.55 E-value=4.4e-07 Score=84.59 Aligned_cols=38 Identities=18% Similarity=0.256 Sum_probs=34.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcC---CceEEEecCCCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAG---HKPLLLEARDVLG 93 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g---~~v~vle~~~~~g 93 (342)
..+||+|||||++|+++|..|++.| .+|+|+|+++.++
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 3589999999999999999999987 9999999987543
No 201
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.49 E-value=8.8e-07 Score=83.53 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=34.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCceEEEecCCCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLG 93 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~-g~~v~vle~~~~~g 93 (342)
..+|++|||||.+|+.+|++|++. |.+|+|||+.....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~ 50 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDR 50 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCC
Confidence 468999999999999999999998 89999999987653
No 202
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.44 E-value=2.2e-07 Score=85.52 Aligned_cols=43 Identities=33% Similarity=0.451 Sum_probs=39.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCccee
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~~ 97 (342)
...+||+|||||++|+++|+.|++.|++|+|+|+.+..||...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 4567999999999999999999999999999999999998653
No 203
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.35 E-value=3.6e-06 Score=77.39 Aligned_cols=36 Identities=31% Similarity=0.492 Sum_probs=32.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
...+++|||+|++|+.+|..|++.|.+|+|+|+.+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 356999999999999999999999999999998654
No 204
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.34 E-value=3.4e-06 Score=78.27 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 46899999999999999999999999999998764
No 205
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.27 E-value=4.7e-06 Score=76.84 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46999999999999999999999999999998654
No 206
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.26 E-value=5.5e-07 Score=82.44 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+||+|||||++|+++|+.|++.|++|+|+|++.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45799999999999999999999999999999976
No 207
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.25 E-value=8.7e-06 Score=75.77 Aligned_cols=49 Identities=16% Similarity=0.382 Sum_probs=37.7
Q ss_pred HHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 278 l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
+.+.++++|++|++++.|++|.. ++.+..|++ +|+++.||.||+|++..
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFR 290 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCEE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCCC
Confidence 45556778999999999999985 333334655 66699999999999754
No 208
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.25 E-value=8.1e-07 Score=79.96 Aligned_cols=35 Identities=34% Similarity=0.393 Sum_probs=32.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~--g~~v~vle~~~~~ 92 (342)
+||+|||||++|+++|..|++. |++|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998765
No 209
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.23 E-value=6.4e-06 Score=76.47 Aligned_cols=50 Identities=20% Similarity=0.173 Sum_probs=38.5
Q ss_pred HHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 278 l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
+.+.+++.|++|+++++|++|..+ +.+..+.+.++ ++.||.||+|++...
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~~-~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKGN--ERVEAVETDKG-TYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETTE-EEECSEEEECSCEEE
T ss_pred HHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECCC-EEEcCEEEECcCCCc
Confidence 455567789999999999999863 34445666655 899999999997653
No 210
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.22 E-value=4.4e-06 Score=77.62 Aligned_cols=50 Identities=14% Similarity=0.146 Sum_probs=38.5
Q ss_pred HHHHHHhcCcEEEecceeeEEEEcCCCCEEEEEecC----CcEEEcCEEEEccCHH
Q 019346 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYLISSSFS 329 (342)
Q Consensus 278 l~~~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~----G~~i~a~~VI~At~~~ 329 (342)
+.+.++++|++|++++.|++|+.++++ ..|++.+ |+++.+|.||+|++..
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKEDG--VYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEETTE--EEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcCCe--EEEEEeccCCCceEEEcCEEEECcCCC
Confidence 455566789999999999999864333 3466666 7689999999999654
No 211
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.22 E-value=9.1e-07 Score=84.63 Aligned_cols=41 Identities=29% Similarity=0.395 Sum_probs=37.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCcce
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~~ 96 (342)
..+||+|||||++|+++|+.|++.|++|+|+|+.+..||..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999999888743
No 212
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.18 E-value=1.4e-05 Score=73.87 Aligned_cols=35 Identities=29% Similarity=0.412 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..+++|||||.+|+-+|..|++.|.+|+|+|+.+.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 35899999999999999999999999999998654
No 213
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=1.4e-05 Score=73.93 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=32.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46899999999999999999999999999998654
No 214
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.08 E-value=3.4e-06 Score=74.71 Aligned_cols=36 Identities=36% Similarity=0.329 Sum_probs=33.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
+||+|||||++|+.||+.|++.|++|+|+|++...+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 699999999999999999999999999999987433
No 215
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.06 E-value=1.2e-05 Score=71.85 Aligned_cols=34 Identities=32% Similarity=0.462 Sum_probs=31.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
.+++|||+|++|+.+|..|++.|.+|+++|+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 5899999999999999999999999999998654
No 216
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.03 E-value=4.1e-06 Score=84.75 Aligned_cols=41 Identities=32% Similarity=0.500 Sum_probs=38.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCCCCcce
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~~gG~~ 96 (342)
..+||+|||||++|++||+.|++.|+ +|+|+|+.+.+||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 46799999999999999999999999 799999999999875
No 217
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.01 E-value=3.3e-06 Score=77.75 Aligned_cols=40 Identities=25% Similarity=0.274 Sum_probs=37.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHH-c------CCceEEEecCCCCCcce
Q 019346 57 PLKVVIAGAGLAGLSTAKYLAD-A------GHKPLLLEARDVLGGKI 96 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~-~------g~~v~vle~~~~~gG~~ 96 (342)
.+||+|||||++|++||..|++ . |++|+|+|+.+.+||.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~ 49 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLV 49 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcc
Confidence 4699999999999999999999 7 99999999998888865
No 218
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.00 E-value=6.6e-05 Score=69.22 Aligned_cols=36 Identities=22% Similarity=0.346 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc--CCceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~--g~~v~vle~~~~ 91 (342)
...+|+|||+|.+|+-+|..|++. +.+|+++++++.
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 356899999999999999999998 889999998765
No 219
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.98 E-value=4.5e-06 Score=79.71 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=32.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
...+||+|||||++|++||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45689999999999999999999999999999973
No 220
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.96 E-value=6.6e-06 Score=75.84 Aligned_cols=41 Identities=24% Similarity=0.282 Sum_probs=37.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--CceEEEecCCCCCcce
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLGGKI 96 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g--~~v~vle~~~~~gG~~ 96 (342)
..+||+|||||++|+++|..|++.| ++|+|+|+.+.+||..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV 47 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee
Confidence 3579999999999999999999998 9999999999888765
No 221
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.96 E-value=5.8e-06 Score=78.07 Aligned_cols=38 Identities=39% Similarity=0.593 Sum_probs=34.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~ 92 (342)
..++|++|||||++|+.+|.+|++.|++|+|||+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 45789999999999999999999999999999998653
No 222
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.88 E-value=0.00014 Score=67.47 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=29.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
.+++|||+|..|+-.|..|++.|.+|+++++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 47999999999999999999999999999864
No 223
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.83 E-value=0.00014 Score=63.80 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 34689999999999999999999999999998754
No 224
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.79 E-value=9.2e-06 Score=76.37 Aligned_cols=38 Identities=29% Similarity=0.359 Sum_probs=34.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..++|+||||||.+|+.+|.+|++ |.+|+|||+....+
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 456899999999999999999999 99999999986543
No 225
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.78 E-value=0.00018 Score=66.13 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..+++|||+|.+|+.+|..|++.|.+|+++++.+.
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 45899999999999999999999999999998653
No 226
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.78 E-value=0.00013 Score=64.78 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4689999999999999999999999999998754
No 227
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.72 E-value=0.00016 Score=64.32 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 4589999999999999999999999999999764
No 228
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.71 E-value=0.00078 Score=63.34 Aligned_cols=49 Identities=10% Similarity=0.087 Sum_probs=41.4
Q ss_pred chHHHHHHHhcCcEEEe--cceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 275 CLPIVEHIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 275 ~~~l~~~l~~~Gv~i~~--~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
...+.+.+.+.+|++.. +++|++|+. + +|+|.+| ++.+|.||+||+...
T Consensus 341 ~~~y~~al~~~nV~lv~~~~~~I~~it~--~----gv~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 341 ETNYYETYNRDNVHLVDIREAPIQEVTP--E----GIKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp ESSHHHHTTSTTEEEEETTTSCEEEEET--T----EEEESSC-EEECSEEEECCCCBS
T ss_pred CccHHHHhcCCCEEEEecCCCCceEEcc--C----eEEeCCC-eeecCEEEECCcccc
Confidence 45678888888999986 899999973 3 3889999 999999999999874
No 229
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.67 E-value=0.00044 Score=64.67 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=29.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEec
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~ 88 (342)
.+++|||+|..|+..|..|++.|.+|+++++
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~ 241 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVR 241 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEec
Confidence 3699999999999999999999999999986
No 230
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.63 E-value=0.00043 Score=66.00 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=29.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
.+|+|||||.+|+-+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 37999999999999999999999999999864
No 231
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.56 E-value=0.0017 Score=61.01 Aligned_cols=50 Identities=10% Similarity=0.157 Sum_probs=39.8
Q ss_pred hHHHHHHHhcCcEEEe--cceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHhh
Q 019346 276 LPIVEHIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSYL 331 (342)
Q Consensus 276 ~~l~~~l~~~Gv~i~~--~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~~ 331 (342)
..+.+.+.+.+|++.. +++|.+|+. + +|+|.+|+++.+|.||+||+....
T Consensus 334 ~~y~~~l~~~nV~lv~~~~~~I~~it~--~----gv~~~dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 334 SGYYEVYNRPNVEAVAIKENPIREVTA--K----GVVTEDGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp SSTGGGGGSTTEEEEETTTSCEEEECS--S----EEEETTCCEEECSEEEECCCBSCS
T ss_pred ccHHHHhcCCCEEEEeCCCCCccEEec--C----eEEcCCCCEEECCEEEECCccCcc
Confidence 4456666777899986 889999963 3 488999988999999999987643
No 232
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.56 E-value=0.00092 Score=57.81 Aligned_cols=34 Identities=29% Similarity=0.311 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 4589999999999999999999999999998654
No 233
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.53 E-value=0.001 Score=57.55 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 4689999999999999999999999999998754
No 234
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.48 E-value=0.00046 Score=63.62 Aligned_cols=35 Identities=34% Similarity=0.491 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..+++|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 45899999999999999999999999999998654
No 235
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.46 E-value=8.2e-05 Score=70.66 Aligned_cols=38 Identities=34% Similarity=0.448 Sum_probs=34.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHH-cCCceEEEecCCCC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~-~g~~v~vle~~~~~ 92 (342)
..++|++|||||.+|+.+|..|++ .|.+|+|||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 356899999999999999999999 79999999997653
No 236
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.42 E-value=0.0017 Score=56.49 Aligned_cols=34 Identities=26% Similarity=0.422 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 3689999999999999999999999999998754
No 237
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.37 E-value=0.00099 Score=57.06 Aligned_cols=43 Identities=16% Similarity=0.300 Sum_probs=33.8
Q ss_pred HHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 281 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 281 ~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
.+.+.|++++. ++|++|.. ++ .|++.+|+++.+|.||+|++..
T Consensus 183 ~l~~~gv~i~~-~~v~~i~~--~~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 183 LLAARGVRVET-TRIREIAG--HA---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp HHHHTTCEEEC-SCEEEEET--TE---EEEETTSCEEEESEEEECCEEE
T ss_pred HHHHCCcEEEc-ceeeeeec--CC---eEEeCCCCEEEEEEEEEccCcc
Confidence 34556899985 89999974 22 4888899899999999999654
No 238
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.33 E-value=0.0029 Score=54.78 Aligned_cols=34 Identities=29% Similarity=0.386 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+|+|||+|.+|+-+|..|.+.|.+|+++++.+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD 187 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC
Confidence 4689999999999999999999999999988654
No 239
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.17 E-value=0.0013 Score=64.26 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=31.6
Q ss_pred CCCeEEEEC--CCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG--~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...+|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 346899999 99999999999999999999999765
No 240
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.16 E-value=0.0026 Score=55.29 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+++|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 4689999999999999999999988999888653
No 241
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.90 E-value=0.0018 Score=48.96 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=34.1
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 53 ~~~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
+......|+|||.|..|...|..|.+.|++|+++|++..
T Consensus 3 ~~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 3 AVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 344556899999999999999999999999999998753
No 242
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.74 E-value=0.0014 Score=56.78 Aligned_cols=36 Identities=19% Similarity=0.394 Sum_probs=33.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+.+-
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~ 181 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccC
Confidence 589999999999999999999999999999987653
No 243
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.73 E-value=0.0021 Score=49.51 Aligned_cols=40 Identities=23% Similarity=0.398 Sum_probs=33.2
Q ss_pred CCCCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 52 PRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 52 ~~~~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
+.......|+|||+|..|...|..|.+.|++|++++++..
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3344566899999999999999999999999999998653
No 244
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.62 E-value=0.0021 Score=57.66 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=34.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..+|+|||+|.+|+.+|..|++.|.+|+|+|+.+.+..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE 183 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 35899999999999999999999999999999887654
No 245
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.54 E-value=0.003 Score=47.38 Aligned_cols=34 Identities=32% Similarity=0.600 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999754
No 246
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.52 E-value=0.0026 Score=56.94 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=34.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+.+..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh
Confidence 46899999999999999999999999999999876543
No 247
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.46 E-value=0.0052 Score=55.47 Aligned_cols=38 Identities=29% Similarity=0.387 Sum_probs=34.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..+|+|||+|.+|+.+|..|++.|.+|+++|+.+.+..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 182 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS 182 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc
Confidence 46899999999999999999999999999999876543
No 248
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.35 E-value=0.0034 Score=57.65 Aligned_cols=38 Identities=26% Similarity=0.418 Sum_probs=34.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+..
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 45899999999999999999999999999999887543
No 249
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.34 E-value=0.0039 Score=57.35 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=33.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
.+++|||||++|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 205 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL 205 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc
Confidence 589999999999999999999999999999987654
No 250
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.30 E-value=0.0037 Score=53.98 Aligned_cols=36 Identities=28% Similarity=0.444 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
...+++|||+|..|+-+|..|++.|.+|+|+|+...
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 346899999999999999999999999999998654
No 251
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.30 E-value=0.0049 Score=55.69 Aligned_cols=38 Identities=32% Similarity=0.372 Sum_probs=34.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..+|+|||+|..|+.+|..|.+.|.+|+++|+.+.+-.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 180 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV 180 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch
Confidence 46899999999999999999999999999999887543
No 252
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.28 E-value=0.0044 Score=56.80 Aligned_cols=36 Identities=25% Similarity=0.503 Sum_probs=33.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~ 92 (342)
..+++|||||++|+.+|..|++.|.+|+|+|+.+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 358999999999999999999999999999998764
No 253
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.27 E-value=0.0078 Score=54.87 Aligned_cols=38 Identities=29% Similarity=0.455 Sum_probs=34.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..+++|||||..|+..|..|++.|.+|+|+|+.+.+..
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~ 184 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK 184 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc
Confidence 45899999999999999999999999999999887543
No 254
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.23 E-value=0.0064 Score=45.84 Aligned_cols=33 Identities=24% Similarity=0.442 Sum_probs=30.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..++|+|+|..|...|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 255
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.19 E-value=0.0055 Score=44.36 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcC-CceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g-~~v~vle~~~ 90 (342)
..+|+|+|+|..|...|..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 358999999999999999999999 8999999854
No 256
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.08 E-value=0.35 Score=44.72 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=29.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc--CCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~--g~~v~vle~~~ 90 (342)
..++|+|||+|.+|.-+|..|++. +.+|+++-++.
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 456899999999999999999975 67898887754
No 257
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.06 E-value=0.0073 Score=55.28 Aligned_cols=37 Identities=30% Similarity=0.425 Sum_probs=33.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 203 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL 203 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh
Confidence 3589999999999999999999999999999987644
No 258
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.06 E-value=0.0095 Score=45.64 Aligned_cols=34 Identities=12% Similarity=0.235 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...++|+|+|..|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3479999999999999999999999999999863
No 259
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.88 E-value=0.011 Score=46.64 Aligned_cols=35 Identities=29% Similarity=0.364 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~-g~~v~vle~~~ 90 (342)
....|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 355899999999999999999999 99999999865
No 260
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.88 E-value=0.0098 Score=54.64 Aligned_cols=37 Identities=32% Similarity=0.456 Sum_probs=33.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||||.+|+.+|..|++.|.+|+++|+.+.+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL 202 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc
Confidence 3589999999999999999999999999999987643
No 261
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.88 E-value=0.0073 Score=55.10 Aligned_cols=36 Identities=33% Similarity=0.547 Sum_probs=32.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
.+|+|||.|.+|+++|..|+++|++|++.|.+...-
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 579999999999999999999999999999987643
No 262
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.77 E-value=0.011 Score=54.57 Aligned_cols=38 Identities=29% Similarity=0.460 Sum_probs=34.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..+++|||||.+|+.+|..|++.|.+|+++|+.+.+..
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 36899999999999999999999999999999876543
No 263
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.76 E-value=0.0074 Score=55.25 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=33.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||+|..|+..|..|++.|.+|+++|+.+.+-
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 185 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL 185 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh
Confidence 4589999999999999999999999999999987643
No 264
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.75 E-value=0.0093 Score=51.62 Aligned_cols=35 Identities=31% Similarity=0.421 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...+|.|||+|.-|...|..++..|++|+++|..+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34589999999999999999999999999999764
No 265
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.72 E-value=0.0095 Score=54.54 Aligned_cols=35 Identities=23% Similarity=0.327 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...+|.|||.|.+|+++|..|.++|++|++.|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34689999999999999999999999999999864
No 266
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.72 E-value=0.013 Score=53.34 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=33.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+|+|||+|..|+.+|..|++.|.+|+++|+.+.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 185 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL 185 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 4689999999999999999999999999999987653
No 267
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.72 E-value=0.012 Score=54.50 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=34.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..+|+|||||.+|+.+|..|++.|.+|+++|+.+.+..
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN 211 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 46899999999999999999999999999999887543
No 268
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=95.69 E-value=0.0095 Score=53.64 Aligned_cols=38 Identities=26% Similarity=0.279 Sum_probs=34.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..+++|||+|.+|+.+|..|.+.|.+|+++|+.+....
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~ 179 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA 179 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh
Confidence 45899999999999999999999999999999876543
No 269
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.69 E-value=0.014 Score=43.86 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=30.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..|+|+|+|..|...|..|.+.|++|+++++..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999753
No 270
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.65 E-value=0.014 Score=50.22 Aligned_cols=34 Identities=29% Similarity=0.515 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+|.|||+|.-|...|..|++.|++|+++|++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999863
No 271
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.61 E-value=0.014 Score=48.08 Aligned_cols=37 Identities=22% Similarity=0.404 Sum_probs=31.8
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 55 ~~~~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
-..+.|+|.|| |..|...|..|+++|++|+++.++..
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 34568999998 99999999999999999999998643
No 272
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.58 E-value=0.015 Score=53.62 Aligned_cols=37 Identities=30% Similarity=0.447 Sum_probs=33.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||||..|+..|..|++.|.+|+++|+.+.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 221 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL 221 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc
Confidence 4589999999999999999999999999999987643
No 273
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.57 E-value=0.012 Score=48.02 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=31.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
++|+|||+|..|...|..|.+.|++|+++|++..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4799999999999999999999999999998653
No 274
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.54 E-value=0.018 Score=50.37 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=32.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
...++|+|||+|..|.+.|..|++.|+ +|+++|...
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 345799999999999999999999998 999999875
No 275
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.52 E-value=0.013 Score=54.33 Aligned_cols=37 Identities=14% Similarity=0.245 Sum_probs=33.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||+|.+|+-.|..|++.|.+|+++|+.+.+-
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 212 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL 212 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC
Confidence 4589999999999999999999999999999987654
No 276
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=95.50 E-value=0.015 Score=54.39 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=32.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
.+++|||||+.|+-.|..+++.|.+|+|+++...+.
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~ 259 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR 259 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc
Confidence 489999999999999999999999999999765543
No 277
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.40 E-value=0.016 Score=50.33 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=31.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|.-|.+.|..|++.|++|+++.+.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999865
No 278
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=95.37 E-value=0.019 Score=52.80 Aligned_cols=37 Identities=19% Similarity=0.176 Sum_probs=33.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~ 92 (342)
...+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 4568999999999999999999999999999988654
No 279
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=95.37 E-value=0.017 Score=52.99 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=33.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||+|.+|+.+|..|++.|.+|+++|+.+.+-
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 212 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF 212 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC
Confidence 4589999999999999999999999999999987643
No 280
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.34 E-value=0.02 Score=46.83 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=32.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
-....|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 45678999999999999999999999999999865
No 281
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.33 E-value=0.019 Score=52.79 Aligned_cols=37 Identities=24% Similarity=0.373 Sum_probs=33.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||+|..|+-+|..|++.|.+|+++|+.+.+.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 210 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA 210 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc
Confidence 3689999999999999999999999999999987654
No 282
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.26 E-value=0.015 Score=54.57 Aligned_cols=36 Identities=14% Similarity=0.328 Sum_probs=33.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
...+|+|||+|.+|+-+|..|++.+.+|+|+++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 456899999999999999999999999999999875
No 283
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.25 E-value=0.013 Score=49.46 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
....|+|||+|-.|...|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45789999999999999999999999999999754
No 284
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.25 E-value=0.019 Score=50.71 Aligned_cols=37 Identities=30% Similarity=0.456 Sum_probs=33.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 54 PSKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 54 ~~~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
.-.+.+|||+|||.+|+.+|..|...|. +|+++|++.
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4466799999999999999999999998 999999975
No 285
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=95.22 E-value=0.024 Score=51.14 Aligned_cols=38 Identities=32% Similarity=0.371 Sum_probs=34.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..+++|||+|..|+.+|..|.+.|.+|+++|+.+.+-.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~ 189 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA 189 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh
Confidence 45899999999999999999999999999999887543
No 286
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.21 E-value=0.019 Score=49.98 Aligned_cols=37 Identities=22% Similarity=0.482 Sum_probs=33.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~ 92 (342)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 3468999999999999999999999999999988754
No 287
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.21 E-value=0.021 Score=52.88 Aligned_cols=38 Identities=29% Similarity=0.497 Sum_probs=34.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..+|+|||||.+|+.+|..|++.|.+|+++|+.+.+..
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 235 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG 235 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc
Confidence 45899999999999999999999999999999876543
No 288
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.18 E-value=0.023 Score=53.59 Aligned_cols=37 Identities=30% Similarity=0.390 Sum_probs=33.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+...
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 187 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM 187 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc
Confidence 3589999999999999999999999999999987643
No 289
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.17 E-value=0.017 Score=49.98 Aligned_cols=33 Identities=36% Similarity=0.551 Sum_probs=30.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|.-|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 589999999999999999999999999999865
No 290
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=95.14 E-value=0.023 Score=51.42 Aligned_cols=38 Identities=24% Similarity=0.295 Sum_probs=33.4
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 53 ~~~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
......+|.|||.|+.||..|..|++.|++|+.+|-..
T Consensus 17 ~~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 17 RGSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp TTCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 34456799999999999999999999999999999763
No 291
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=95.12 E-value=0.021 Score=49.74 Aligned_cols=37 Identities=19% Similarity=0.392 Sum_probs=33.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~ 92 (342)
...+|+|||+|.+|+-.|..|++.|.+|+++++.+.+
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF 190 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC
Confidence 3468999999999999999999999999999987654
No 292
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=95.10 E-value=0.021 Score=49.23 Aligned_cols=36 Identities=28% Similarity=0.439 Sum_probs=32.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~ 92 (342)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF 180 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc
Confidence 468999999999999999999999999999987654
No 293
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.09 E-value=0.026 Score=50.34 Aligned_cols=36 Identities=25% Similarity=0.341 Sum_probs=32.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
...+|+|||+|..|+.+|..|...|.+|+++|.+..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 456999999999999999999999999999998764
No 294
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.09 E-value=0.025 Score=52.15 Aligned_cols=37 Identities=32% Similarity=0.410 Sum_probs=33.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||+|.+|+-+|..|++.|.+|+++++.+.+-
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 3589999999999999999999999999999977643
No 295
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.07 E-value=0.024 Score=52.21 Aligned_cols=35 Identities=34% Similarity=0.585 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..++|.|||+|..|+..|..|++.|++|++++...
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 46799999999999999999999999999999863
No 296
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.01 E-value=0.023 Score=51.84 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=33.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCc-eEEEecCCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDVL 92 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~-v~vle~~~~~ 92 (342)
...+|+|||+|.+|+-+|..|++.|.+ |+++++.+..
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 456899999999999999999999998 9999987643
No 297
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.99 E-value=0.027 Score=48.02 Aligned_cols=34 Identities=21% Similarity=0.207 Sum_probs=31.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
++|.|||+|..|.+.|..|++.|++|+++++...
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 3699999999999999999999999999998753
No 298
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.98 E-value=0.031 Score=51.12 Aligned_cols=38 Identities=21% Similarity=0.324 Sum_probs=34.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCc
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~gG 94 (342)
..+++|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 184 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP 184 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc
Confidence 46899999999999999999999999999999876543
No 299
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.93 E-value=0.027 Score=47.96 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=31.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.+|.|||+|.-|...|..|++.|++|+++|.++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 479999999999999999999999999999875
No 300
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.93 E-value=0.027 Score=49.69 Aligned_cols=36 Identities=31% Similarity=0.546 Sum_probs=32.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecC
Q 019346 54 PSKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (342)
Q Consensus 54 ~~~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~ 89 (342)
.-.+.+|+|+|||.+|..+|..|...|. +|+|+|+.
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3466799999999999999999999997 89999987
No 301
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.91 E-value=0.03 Score=51.89 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=33.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc---CCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~---g~~v~vle~~~~~g 93 (342)
..+++|||+|..|+-+|..|++. |.+|+++|+.+.+-
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 230 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL 230 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc
Confidence 35899999999999999999999 99999999987643
No 302
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.88 E-value=0.034 Score=45.03 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..++|.|||+|..|.+.|..|++.|++|+++++...
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 456899999999999999999999999999998754
No 303
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.87 E-value=0.026 Score=48.42 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.++|.|||+|.-|.+.|..|++.|++|+++++..
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 3589999999999999999999999999999874
No 304
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.86 E-value=0.031 Score=48.48 Aligned_cols=34 Identities=32% Similarity=0.437 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+|.|||+|.-|.+.|..|++.|++|+++|.++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3589999999999999999999999999999874
No 305
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.86 E-value=0.031 Score=48.75 Aligned_cols=35 Identities=20% Similarity=0.117 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHH-HHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~-~A~~l~~~g~~v~vle~~~~ 91 (342)
..+|.|||.|.+|++ +|..|.++|++|++.|.+..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 458999999999997 78888999999999998754
No 306
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.84 E-value=0.028 Score=49.68 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...+|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45699999999999999999999999999999875
No 307
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.83 E-value=0.032 Score=51.59 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=33.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc---CCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~---g~~v~vle~~~~~g 93 (342)
..+++|||+|..|+.+|..|.+. |.+|+++|+.+.+.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 226 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL 226 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc
Confidence 45899999999999999999999 99999999987644
No 308
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.83 E-value=0.036 Score=50.97 Aligned_cols=37 Identities=35% Similarity=0.430 Sum_probs=33.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||+|.+|+-.|..|++.|.+|+++++.+.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 216 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL 216 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Confidence 4589999999999999999999999999999987654
No 309
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.82 E-value=0.031 Score=48.45 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
.++|+|||+|..|.+.|..|++.|+ +|+++++..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999999864
No 310
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=94.80 E-value=0.038 Score=50.59 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVL 92 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~~ 92 (342)
...+|+|||||.+|+-+|..+.+.|. +|+++++++..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 45689999999999999999999987 59999987653
No 311
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.78 E-value=0.03 Score=51.06 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=31.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|..|+..|..|++.|++|++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999874
No 312
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=94.73 E-value=0.031 Score=48.55 Aligned_cols=36 Identities=22% Similarity=0.414 Sum_probs=32.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
...+|+|||+|.+|+.+|..|++.|.+|+++++.+.
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 346899999999999999999999999999998765
No 313
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.71 E-value=0.04 Score=47.64 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=33.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
...++|.|||.|.-|...|..|++.|++|+++++...
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3456899999999999999999999999999998754
No 314
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.66 E-value=0.051 Score=49.50 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
-.+|.|||+|.-|...|..|++.|++|+++|.++.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 35899999999999999999999999999998754
No 315
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=94.65 E-value=0.028 Score=48.58 Aligned_cols=36 Identities=19% Similarity=0.197 Sum_probs=32.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~ 92 (342)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~ 190 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY 190 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc
Confidence 468999999999999999999999999999987653
No 316
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.62 E-value=0.042 Score=47.90 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
..+|.|||+|..|.+.|..|+..|+ +|+++|...
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3689999999999999999999998 999999875
No 317
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.60 E-value=0.039 Score=48.24 Aligned_cols=32 Identities=31% Similarity=0.318 Sum_probs=30.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
++|.|||+|.-|.+.|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999999999999999999999999999974
No 318
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.53 E-value=0.04 Score=48.61 Aligned_cols=35 Identities=31% Similarity=0.275 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..++|.|||+|.-|.+.|..|++.|++|+++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 35689999999999999999999999999999863
No 319
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=94.53 E-value=0.038 Score=51.55 Aligned_cols=36 Identities=17% Similarity=0.363 Sum_probs=33.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
.+++|||+|..|+.+|..|.+.|.+|+++|+.+.+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc
Confidence 689999999999999999999999999999987644
No 320
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.51 E-value=0.043 Score=51.99 Aligned_cols=37 Identities=22% Similarity=0.418 Sum_probs=33.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||+|.+|+.+|..|++.|.+|+++++.+.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 223 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM 223 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 4589999999999999999999999999999987643
No 321
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.50 E-value=0.046 Score=49.75 Aligned_cols=36 Identities=19% Similarity=0.488 Sum_probs=32.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
...++.|||.|.-|+..|..|++.|++|++++.+..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 356899999999999999999999999999998754
No 322
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.47 E-value=0.04 Score=47.50 Aligned_cols=33 Identities=30% Similarity=0.479 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 589999999999999999999999999999864
No 323
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=94.47 E-value=0.049 Score=50.48 Aligned_cols=37 Identities=16% Similarity=0.363 Sum_probs=33.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||+|..|+..|..|.+.|.+|+++|+.+.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 218 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL 218 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 3589999999999999999999999999999987654
No 324
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.41 E-value=0.043 Score=47.26 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
++|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 999999764
No 325
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.40 E-value=0.035 Score=51.80 Aligned_cols=36 Identities=28% Similarity=0.302 Sum_probs=32.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~ 92 (342)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l 390 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 390 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCccc
Confidence 468999999999999999999999999999987664
No 326
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.37 E-value=0.041 Score=50.48 Aligned_cols=35 Identities=29% Similarity=0.349 Sum_probs=32.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc-CC-ceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADA-GH-KPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~-g~-~v~vle~~~~ 91 (342)
.++|.|||+|.-|+..|..|++. |+ +|+++|.+..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999999 99 9999998765
No 327
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=94.37 E-value=0.08 Score=48.49 Aligned_cols=36 Identities=22% Similarity=0.229 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHH--------------------HcCC-ceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLA--------------------DAGH-KPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~--------------------~~g~-~v~vle~~~~ 91 (342)
...+|+|||+|.+|+-+|..|+ +.|. +|+|+++++.
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 3568999999999999999999 4576 7999998765
No 328
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.35 E-value=0.045 Score=47.50 Aligned_cols=35 Identities=43% Similarity=0.585 Sum_probs=29.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
....+|.|||+|.-|.+.|..|++.|++|+++ +++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 45678999999999999999999999999999 654
No 329
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.29 E-value=0.046 Score=47.16 Aligned_cols=33 Identities=36% Similarity=0.508 Sum_probs=30.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.++|.|||+|.-|.+.|..|+ .|++|+++.+..
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 468999999999999999999 999999999874
No 330
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.25 E-value=0.05 Score=47.19 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
..+|.|||+|..|.+.|..|++.|+ +|+++|...
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3589999999999999999999998 999999865
No 331
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=94.18 E-value=0.067 Score=49.27 Aligned_cols=34 Identities=32% Similarity=0.544 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+++|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 3489999999999999999999999999999753
No 332
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.17 E-value=0.052 Score=46.40 Aligned_cols=34 Identities=32% Similarity=0.517 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
....|.|||+|.-|...|..|+ .|++|+++|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4568999999999999999999 999999999864
No 333
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=94.16 E-value=0.052 Score=49.89 Aligned_cols=37 Identities=38% Similarity=0.477 Sum_probs=33.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~-g~~v~vle~~~~~g 93 (342)
..+++|||+|.+|+.+|..|++. |.+|+++|+.+.+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l 196 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM 196 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc
Confidence 46899999999999999999999 99999999987643
No 334
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.15 E-value=0.023 Score=52.01 Aligned_cols=35 Identities=23% Similarity=0.419 Sum_probs=32.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..++|+|+|+|-.|...|..|.+.|++|+|+|+.+
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35689999999999999999999999999999874
No 335
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.14 E-value=0.055 Score=47.29 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
.+.+|.|||+|.-|.+.|..|++.|++|+++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4679999999999999999999999999999886
No 336
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.06 E-value=0.059 Score=45.93 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=31.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
++|.|||.|..|...|..|++.|++|+++++...
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999998754
No 337
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.05 E-value=0.07 Score=46.33 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
..+|+|||+|..|...|..|+..|+ +|+++|...
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3589999999999999999999998 999999764
No 338
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.04 E-value=0.044 Score=49.87 Aligned_cols=33 Identities=24% Similarity=0.462 Sum_probs=30.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|..|+..|..|++.|++|++++...
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999999753
No 339
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=94.00 E-value=0.06 Score=46.13 Aligned_cols=36 Identities=33% Similarity=0.454 Sum_probs=32.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~ 92 (342)
..+++|||+|.+|+.+|..|.+.|.+|+++++.+..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 468999999999999999999999999999987654
No 340
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.98 E-value=0.07 Score=44.33 Aligned_cols=38 Identities=26% Similarity=0.332 Sum_probs=32.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 54 ~~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
.....+|.|||+|.-|.+.|..|++.|++|++++++..
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 34567899999999999999999999999999997643
No 341
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.90 E-value=0.063 Score=47.25 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=30.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|..|...|..|++.|++|+++++..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999998863
No 342
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.90 E-value=0.065 Score=48.09 Aligned_cols=36 Identities=31% Similarity=0.445 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
....|+|||+|..|+.+|..|...|.+|+++|.+..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 356899999999999999999999999999998753
No 343
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.89 E-value=0.081 Score=48.45 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+|.|||+|.-|...|..|++.|++|+++|.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999764
No 344
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.88 E-value=0.067 Score=46.01 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..++|.|||.|.-|...|..|++.|++|+++++..
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34689999999999999999999999999999864
No 345
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.88 E-value=0.059 Score=46.77 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=32.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...++|.|||.|..|...|..|++.|++|+++++..
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 345699999999999999999999999999999874
No 346
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.88 E-value=0.077 Score=43.11 Aligned_cols=35 Identities=29% Similarity=0.238 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999998764
No 347
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.88 E-value=0.07 Score=46.06 Aligned_cols=33 Identities=33% Similarity=0.534 Sum_probs=29.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~--g~~v~vle~~~ 90 (342)
++|+|||+|..|.+.|..|++. |++|+++|...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3799999999999999999985 78999999875
No 348
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.87 E-value=0.059 Score=44.94 Aligned_cols=35 Identities=37% Similarity=0.528 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~ 91 (342)
..+|+|||+|-.|..+|..|++.|. +|+|+|....
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 4589999999999999999999997 8999998764
No 349
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=93.80 E-value=0.073 Score=48.75 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=33.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||+|.+|+..|..|.+.|.+|+++++.+.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l 206 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL 206 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 4589999999999999999999999999999987643
No 350
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.77 E-value=0.03 Score=42.29 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...|+|||+|..|...|..|.+.|++|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5689999999999999999999998999998764
No 351
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=93.74 E-value=0.075 Score=48.98 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=33.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~g 93 (342)
..+++|||+|.+|+..|..|++.|.+|+++++.+.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l 227 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL 227 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc
Confidence 4589999999999999999999999999999987643
No 352
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.68 E-value=0.059 Score=46.92 Aligned_cols=31 Identities=29% Similarity=0.384 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEec
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~ 88 (342)
++|.|||+|..|.+.|..|++.|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3699999999999999999999999999998
No 353
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=93.68 E-value=0.056 Score=50.12 Aligned_cols=58 Identities=22% Similarity=0.243 Sum_probs=41.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--------------CCceEEEecCCCCCcceeeeccCCCceeecceeEecCCcccHHH
Q 019346 58 LKVVIAGAGLAGLSTAKYLADA--------------GHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQN 123 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~--------------g~~v~vle~~~~~gG~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 123 (342)
..++|||||++|+..|..|++. ..+|+++|+.+.+-..... .....+.+
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~-----------------~~~~~~~~ 280 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEK-----------------KLSSYAQS 280 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCH-----------------HHHHHHHH
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCH-----------------HHHHHHHH
Confidence 4799999999999999988753 2589999998876543221 01233556
Q ss_pred HHHHcCCCc
Q 019346 124 LFGELGIND 132 (342)
Q Consensus 124 l~~~~gi~~ 132 (342)
.+++.|++.
T Consensus 281 ~L~~~GV~v 289 (502)
T 4g6h_A 281 HLENTSIKV 289 (502)
T ss_dssp HHHHTTCEE
T ss_pred HHHhcceee
Confidence 677788764
No 354
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.67 E-value=0.077 Score=47.78 Aligned_cols=35 Identities=31% Similarity=0.453 Sum_probs=32.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
...|+|||.|-.|...|..|.+.|++|+++|.+..
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 45799999999999999999999999999998753
No 355
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.64 E-value=0.067 Score=48.31 Aligned_cols=35 Identities=31% Similarity=0.545 Sum_probs=30.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...++|.|||.|..|+..|..|++ |++|++++...
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 445689999999999999999998 99999999864
No 356
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.59 E-value=0.089 Score=46.93 Aligned_cols=36 Identities=25% Similarity=0.437 Sum_probs=32.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
...+|+|||+|..|+.+|..+...|.+|+++|.+..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 456899999999999999999999999999998753
No 357
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.57 E-value=0.093 Score=45.54 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
..+|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4689999999999999999999998 999999865
No 358
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.55 E-value=0.089 Score=45.41 Aligned_cols=33 Identities=36% Similarity=0.536 Sum_probs=30.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
.+|+|||+|..|...|+.|+..|+ +|+++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999996 899999754
No 359
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.55 E-value=0.081 Score=42.69 Aligned_cols=33 Identities=30% Similarity=0.455 Sum_probs=29.9
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG-~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.||| +|..|...|..|++.|++|++++++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999 99999999999999999999998753
No 360
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.54 E-value=0.062 Score=46.05 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..+|.|||.|.-|...|..|++.|++|++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998764
No 361
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.53 E-value=0.091 Score=44.38 Aligned_cols=34 Identities=18% Similarity=0.138 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...++|+|+|-.|.++|..|++.|.+|+++.+..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4589999999999999999999999999998763
No 362
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.49 E-value=0.058 Score=48.45 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|..|+..|..|++ |++|+++++..
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999999864
No 363
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.43 E-value=0.095 Score=46.30 Aligned_cols=34 Identities=32% Similarity=0.480 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...|+|+|+|.+|..+|..|...|.+|++++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 364
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.41 E-value=0.082 Score=44.76 Aligned_cols=36 Identities=14% Similarity=0.088 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..++|+|.|||..|...+..|.++|++|+++.++..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 346899999999999999999999999999988653
No 365
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=93.35 E-value=0.11 Score=43.70 Aligned_cols=35 Identities=23% Similarity=0.181 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
...++|||+|-+|-++|+.|++.|.+|+|+.+...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 67899999999999999999999999999987643
No 366
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.34 E-value=0.094 Score=45.31 Aligned_cols=33 Identities=33% Similarity=0.436 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~ 89 (342)
..+|.|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4589999999999999999999999 99999987
No 367
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.34 E-value=0.089 Score=45.58 Aligned_cols=34 Identities=32% Similarity=0.363 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
..+|+|||+|..|.+.|+.|+..++ +|+++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999987 899999764
No 368
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.30 E-value=0.08 Score=45.92 Aligned_cols=33 Identities=33% Similarity=0.427 Sum_probs=30.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
++|.|||+|..|.+.|..|++.|+ +|+++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 379999999999999999999998 999999863
No 369
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.29 E-value=0.087 Score=48.45 Aligned_cols=33 Identities=30% Similarity=0.475 Sum_probs=30.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.+|.|||+|.-|...|..|++.|++|+++|.+.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999875
No 370
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.27 E-value=0.1 Score=45.98 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..|+|||||..|..+|+.+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4799999999999999999999999999998754
No 371
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.25 E-value=0.15 Score=44.23 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
...+|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 45799999999999999999999987 899999753
No 372
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.20 E-value=0.061 Score=46.43 Aligned_cols=32 Identities=25% Similarity=0.303 Sum_probs=29.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc-----C-CceEEEec
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADA-----G-HKPLLLEA 88 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~-----g-~~v~vle~ 88 (342)
.++|.|||+|.-|.+.|..|++. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 36899999999999999999999 9 99999987
No 373
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.20 E-value=0.072 Score=45.39 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=31.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
.+|.|||.|.-|...|..|++.|++|++++++..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3799999999999999999999999999998754
No 374
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=93.15 E-value=0.08 Score=46.16 Aligned_cols=34 Identities=15% Similarity=0.308 Sum_probs=30.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...+|+|||+|.+|+-+|..|++.| +|+++.+..
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 4568999999999999999999998 699998763
No 375
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.05 E-value=0.094 Score=44.82 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
++|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999987 899999764
No 376
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.04 E-value=0.092 Score=45.37 Aligned_cols=34 Identities=26% Similarity=0.260 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~ 89 (342)
..++|.|||.|.-|...|..|++.|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 45689999999999999999999999 99999985
No 377
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.04 E-value=0.13 Score=41.54 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=30.0
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|+|+|| |..|...+..|+++|++|+++.++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 36999996 9999999999999999999999864
No 378
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.02 E-value=0.12 Score=45.81 Aligned_cols=35 Identities=31% Similarity=0.490 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
....|+|+|+|..|..+|..|...|.+|++++++.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34689999999999999999999999999999764
No 379
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.98 E-value=0.17 Score=43.53 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...+|.|||.|.-|...|..|++.|++|+++++..
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 380
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.95 E-value=0.099 Score=47.78 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
....|+|||+|-+|...|..|.+.|.+|+|++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3568999999999999999999999999999975
No 381
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=92.94 E-value=0.1 Score=44.78 Aligned_cols=34 Identities=21% Similarity=0.418 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
..+|.|||+|..|...|+.|+..|+ .|+++|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3689999999999999999999998 899999875
No 382
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=92.94 E-value=0.09 Score=53.27 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=30.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
.+|+|||||.+|+-+|..|++.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999996 899999876
No 383
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.94 E-value=0.15 Score=44.04 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..+|.|||+|..|...|..|++.|++|+++++...
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998643
No 384
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=92.93 E-value=0.11 Score=47.91 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHH----cCCceEEEecCCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLAD----AGHKPLLLEARDVL 92 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~----~g~~v~vle~~~~~ 92 (342)
..+|+|||||.+|+-+|..|++ .|.+|+++++.+..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~ 219 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN 219 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc
Confidence 4589999999999999999987 47899999987643
No 385
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=92.93 E-value=0.092 Score=44.39 Aligned_cols=35 Identities=26% Similarity=0.141 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
....++|+|+|-+|.++|..|++.|.+|+|+.+..
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34689999999999999999999999999998763
No 386
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.89 E-value=0.099 Score=45.10 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=30.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC--CceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g--~~v~vle~~~ 90 (342)
++|.|||+|..|.+.|..|++.| ++|+++|...
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 7899999864
No 387
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.86 E-value=0.08 Score=46.82 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=30.1
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 59 dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
+|.|||+|.-|.+.|..|++.|++|+++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999998763
No 388
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.85 E-value=0.16 Score=43.03 Aligned_cols=34 Identities=35% Similarity=0.451 Sum_probs=31.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
+.|+|.|+|..|...+..|+++|++|+++.+...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5799999999999999999999999999988643
No 389
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.84 E-value=0.1 Score=44.75 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.++|.|||.|..|...|..|++.|++|+++++..
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3589999999999999999999999999998864
No 390
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.81 E-value=0.14 Score=44.32 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
..+|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3589999999999999999999888 999999865
No 391
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.79 E-value=0.11 Score=44.98 Aligned_cols=34 Identities=21% Similarity=0.114 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcC-CceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g-~~v~vle~~~ 90 (342)
.++|.|||.|.-|...|..|++.| ++|+++++..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999999875
No 392
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.76 E-value=0.13 Score=45.42 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.++|.|||.|.-|...|..|++.|++|+++++..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 393
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=92.70 E-value=0.14 Score=41.40 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=30.1
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|+|.|| |..|...+..|+++|++|+++.++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 36999998 9999999999999999999998864
No 394
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.68 E-value=0.13 Score=43.50 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=30.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 368999999999999999999999999998764
No 395
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=92.67 E-value=0.13 Score=44.12 Aligned_cols=35 Identities=11% Similarity=0.075 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
....++|||+|-+|.++|..|++.|. +|+|+.+..
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 34589999999999999999999997 899998763
No 396
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.66 E-value=0.14 Score=44.49 Aligned_cols=34 Identities=29% Similarity=0.411 Sum_probs=30.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
..+|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4689999999999999999999887 899999753
No 397
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.64 E-value=0.12 Score=44.58 Aligned_cols=33 Identities=27% Similarity=0.519 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
++|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999886 899999865
No 398
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=92.62 E-value=0.18 Score=48.72 Aligned_cols=40 Identities=20% Similarity=0.138 Sum_probs=35.1
Q ss_pred CCCeEEEEC--CCHHHHHHHHHHHHcCCceEEEecCCCCCcc
Q 019346 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARDVLGGK 95 (342)
Q Consensus 56 ~~~dv~IiG--~G~~G~~~A~~l~~~g~~v~vle~~~~~gG~ 95 (342)
...+|+||| +|.+|+.+|..|++.|.+|+++++.+.....
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~ 563 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW 563 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc
Confidence 345799999 9999999999999999999999998876543
No 399
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=92.61 E-value=0.23 Score=45.38 Aligned_cols=37 Identities=24% Similarity=0.424 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc--------------------C-CceEEEecCCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADA--------------------G-HKPLLLEARDVL 92 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~--------------------g-~~v~vle~~~~~ 92 (342)
...+|+|||+|.+|+-+|..|++. | .+|+|+++++..
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 356899999999999999999974 5 489999987653
No 400
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.60 E-value=0.11 Score=44.38 Aligned_cols=36 Identities=36% Similarity=0.506 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~ 91 (342)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 55799999999999999999999996 8999998654
No 401
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.59 E-value=0.039 Score=45.28 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
..++|.|||.|.-|.+.|..|.+.|++|+++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 4568999999999999999999999999999875
No 402
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.58 E-value=0.16 Score=44.09 Aligned_cols=36 Identities=17% Similarity=0.264 Sum_probs=31.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
....+|.|||+|..|.+.|+.|+..|+ .++++|...
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 445699999999999999999999987 899999753
No 403
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.56 E-value=0.17 Score=43.69 Aligned_cols=35 Identities=31% Similarity=0.336 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
...+|.|||.|..|.+.|..|++.|+ +|+++++..
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 34689999999999999999999999 999999875
No 404
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.55 E-value=0.18 Score=43.12 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=31.0
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG-~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+|.||| +|.-|.+.|..|++.|++|+++++..
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 35799999 99999999999999999999998764
No 405
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.52 E-value=0.12 Score=47.47 Aligned_cols=33 Identities=27% Similarity=0.308 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc--CCceEEEecC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEAR 89 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~--g~~v~vle~~ 89 (342)
.++|.|||.|..|+..|..|++. |++|++++.+
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 36899999999999999999998 7899999975
No 406
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=92.50 E-value=0.13 Score=43.09 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=30.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC-CceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g-~~v~vle~~~ 90 (342)
++|.|||+|.-|.+.|..|++.| ++|++++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 36999999999999999999999 9999999864
No 407
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=92.50 E-value=0.054 Score=49.13 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=34.7
Q ss_pred HHHhcCcEEEecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHH
Q 019346 281 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFS 329 (342)
Q Consensus 281 ~l~~~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~ 329 (342)
.+.++|+++. ...|++|..+ + . .|++.+|+++.+|++|+||++.
T Consensus 65 ~~~~~gv~~i-~~~v~~Id~~-~-~--~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 65 LLPKFNIEFI-NEKAESIDPD-A-N--TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TGGGGTEEEE-CSCEEEEETT-T-T--EEEETTCCEEECSEEEECCCCE
T ss_pred HHHHCCcEEE-EeEEEEEECC-C-C--EEEECCCCEEECCEEEEeCCCC
Confidence 3456789986 5579999863 3 3 3889999999999999999975
No 408
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.49 E-value=0.08 Score=43.16 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=30.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEE-EecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~v-le~~~ 90 (342)
.++|.|||+|.-|.+.|..|++.|++|++ ++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 46899999999999999999999999998 77654
No 409
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.47 E-value=0.16 Score=44.16 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=32.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~ 91 (342)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 46799999999999999999999996 8999998654
No 410
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.43 E-value=0.15 Score=44.49 Aligned_cols=38 Identities=18% Similarity=0.316 Sum_probs=30.8
Q ss_pred CCCCCeEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 54 PSKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 54 ~~~~~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
....+.|+|.|| |..|...+..|+++|++|+++.+...
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 445668999998 99999999999999999999998754
No 411
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=92.42 E-value=0.11 Score=47.00 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+..|||.|.-|+..|..|++.|++|+++|.+.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3478999999999999999999999999999875
No 412
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.40 E-value=0.16 Score=45.10 Aligned_cols=35 Identities=31% Similarity=0.489 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
....|+|||+|..|..+|..+...|.+|++++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 45689999999999999999999999999999764
No 413
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.29 E-value=0.13 Score=44.05 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=30.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|..|...|..|++.|++|+++++..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999998764
No 414
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=92.29 E-value=0.19 Score=42.80 Aligned_cols=34 Identities=24% Similarity=0.530 Sum_probs=31.0
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
++|+|.|| |..|...+..|.++|++|+++-+++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 57999998 99999999999999999999987654
No 415
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=92.28 E-value=0.087 Score=53.00 Aligned_cols=35 Identities=17% Similarity=0.293 Sum_probs=32.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~ 92 (342)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSI 319 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc
Confidence 58999999999999999999999999999988764
No 416
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.16 E-value=0.22 Score=42.29 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=31.2
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.++|.|||+ |..|.+.|..|++.|++|++++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 358999999 9999999999999999999999764
No 417
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=92.10 E-value=0.15 Score=43.51 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=29.9
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 59 dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
+|.|||+|.-|...|..|++.|++|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 68999999999999999999999999999864
No 418
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=92.08 E-value=0.14 Score=45.39 Aligned_cols=40 Identities=28% Similarity=0.432 Sum_probs=34.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHcCC---ceEEEecCC-CCCcc
Q 019346 56 KPLKVVIAGA-GLAGLSTAKYLADAGH---KPLLLEARD-VLGGK 95 (342)
Q Consensus 56 ~~~dv~IiG~-G~~G~~~A~~l~~~g~---~v~vle~~~-~~gG~ 95 (342)
...+|+|||+ |.+|+.|+..+...|. +|+++|.+. .-||.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 4679999999 9999999999999997 999999976 44554
No 419
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.07 E-value=0.15 Score=42.45 Aligned_cols=36 Identities=39% Similarity=0.481 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~ 91 (342)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 35699999999999999999999997 8899998654
No 420
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.07 E-value=0.17 Score=43.94 Aligned_cols=36 Identities=22% Similarity=0.234 Sum_probs=31.2
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecC
Q 019346 54 PSKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (342)
Q Consensus 54 ~~~~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~ 89 (342)
.....+|+|||+|..|.+.|+.|+..++ .++++|..
T Consensus 6 ~~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 3455799999999999999999998875 79999975
No 421
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.06 E-value=0.18 Score=43.78 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=31.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~ 89 (342)
....+|+|||+|..|.+.|+.|+..|+ +++++|..
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 345689999999999999999999887 89999975
No 422
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=92.02 E-value=0.2 Score=43.78 Aligned_cols=35 Identities=29% Similarity=0.250 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...+|.|||.|.-|.+.|..|.+.|++|++++++.
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34579999999999999999999999999999875
No 423
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=92.01 E-value=0.21 Score=46.80 Aligned_cols=55 Identities=11% Similarity=0.070 Sum_probs=41.8
Q ss_pred HHHHHHHh-cCcEEEecceeeEEEEcCCCCEEEEEecC---Cc--EE---EcCEEEEccCHHhhh
Q 019346 277 PIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VI---DGDAYLISSSFSYLK 332 (342)
Q Consensus 277 ~l~~~l~~-~Gv~i~~~t~V~~I~~~~~g~~~~v~t~~---G~--~i---~a~~VI~At~~~~~~ 332 (342)
.+++.+.+ .|++|++++.|++|..+ ++.+.+|++.+ |+ ++ .++.||+|++++...
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp 263 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTS 263 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCH
Confidence 35666655 48999999999999884 56677888755 63 34 789999999997543
No 424
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.97 E-value=0.18 Score=48.91 Aligned_cols=33 Identities=33% Similarity=0.374 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.+|.|||+|.-|...|..|++.|++|+++|.++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999864
No 425
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=91.95 E-value=0.16 Score=43.00 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..+++|||+|..|.+.|..|.+.|.+|+++++..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998763
No 426
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.93 E-value=0.15 Score=43.10 Aligned_cols=36 Identities=19% Similarity=0.087 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~ 91 (342)
....++|||+|-+|.++|+.|++.|. +|+|+.+...
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 45689999999999999999999998 8999987653
No 427
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.92 E-value=0.21 Score=43.22 Aligned_cols=35 Identities=31% Similarity=0.486 Sum_probs=30.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
...+|+|||+|..|.+.|+.|+..+. +|+++|...
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 34689999999999999999998875 799999764
No 428
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.89 E-value=0.12 Score=45.90 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=31.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC-------CceEEEecCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g-------~~v~vle~~~~ 91 (342)
++|.|||+|.-|.+.|..|++.| ++|+++++...
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998654
No 429
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.87 E-value=0.077 Score=43.65 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=30.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
....++|+|+|..|...|..|.+.|+ |+++|++..
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 34589999999999999999999999 999998653
No 430
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.81 E-value=0.21 Score=39.60 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=30.6
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
+.|+|+|| |..|...+..|+++|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 57999998 9999999999999999999998864
No 431
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=91.78 E-value=0.25 Score=42.78 Aligned_cols=36 Identities=19% Similarity=0.405 Sum_probs=31.7
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHcCCceEEEecCC
Q 019346 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 55 ~~~~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
-..+.|+|.|| |..|...|..|+++|++|+++.+..
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34568999998 9999999999999999999998854
No 432
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=91.77 E-value=0.16 Score=47.52 Aligned_cols=49 Identities=10% Similarity=0.148 Sum_probs=38.6
Q ss_pred chHHHHHHHhcCcEEE--ecceeeEEEEcCCCCEEEEEecCCcEEEcCEEEEccCHHh
Q 019346 275 CLPIVEHIQSLGGEVR--LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYLISSSFSY 330 (342)
Q Consensus 275 ~~~l~~~l~~~Gv~i~--~~t~V~~I~~~~~g~~~~v~t~~G~~i~a~~VI~At~~~~ 330 (342)
-..+.+.+.+.+|++. .+++|++|+ ++ +|++.+ +++.+|.||+||+...
T Consensus 341 ~~~y~~~~~~~~v~lv~~~~~~i~~i~--~~----gv~~~d-~~~~~D~ii~atG~~~ 391 (542)
T 1w4x_A 341 EIDYYEMFNRDNVHLVDTLSAPIETIT--PR----GVRTSE-REYELDSLVLATGFDA 391 (542)
T ss_dssp ESSHHHHTTSTTEEEEETTTSCEEEEC--SS----EEEESS-CEEECSEEEECCCCCC
T ss_pred CccHHHHhCCCCEEEEecCCCCceEEc--CC----eEEeCC-eEEecCEEEEcCCccc
Confidence 3567888877788886 378899986 33 377888 7999999999998764
No 433
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=91.76 E-value=0.21 Score=41.68 Aligned_cols=34 Identities=26% Similarity=0.244 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
.. .++|||+|-+|-++++.|.+.|. +|+|+.+..
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 44 89999999999999999999998 899998864
No 434
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.69 E-value=0.22 Score=42.61 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
....|.|||+|-.|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45689999999999999999999999999999764
No 435
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.68 E-value=0.13 Score=47.17 Aligned_cols=33 Identities=21% Similarity=0.340 Sum_probs=30.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~--g~~v~vle~~~ 90 (342)
++|.|||.|..|+..|..|++. |++|+++++..
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999998 89999999753
No 436
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=91.67 E-value=0.23 Score=42.82 Aligned_cols=34 Identities=24% Similarity=0.191 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~ 89 (342)
....++|+|+|-+|-++|+.|++.|. +|+|+.+.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 45689999999999999999999998 89999876
No 437
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.62 E-value=0.22 Score=43.51 Aligned_cols=33 Identities=27% Similarity=0.260 Sum_probs=29.6
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHcCC--ceEEEecC
Q 019346 57 PLKVVIAGA-GLAGLSTAKYLADAGH--KPLLLEAR 89 (342)
Q Consensus 57 ~~dv~IiG~-G~~G~~~A~~l~~~g~--~v~vle~~ 89 (342)
..+|+|||+ |..|.++|+.++..|. +|+++|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 468999997 9999999999999884 89999975
No 438
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=91.61 E-value=0.18 Score=43.17 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.++|.|||+|..|...|..|++.|++|+++++..
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3589999999999999999999999999998764
No 439
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=91.60 E-value=0.23 Score=42.12 Aligned_cols=35 Identities=31% Similarity=0.241 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
....++|+|+|-+|.++|+.|++.|. +|+|+.+..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 45689999999999999999999998 699998764
No 440
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.58 E-value=0.11 Score=45.65 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=31.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC-------CceEEEecCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g-------~~v~vle~~~~ 91 (342)
++|.|||+|.-|.+.|..|++.| ++|+++++...
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999999998 89999998654
No 441
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.56 E-value=0.21 Score=42.21 Aligned_cols=33 Identities=33% Similarity=0.379 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
.+|.|||+|.-|.+.|..|++.|+ +|+++++..
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 379999999999999999999998 899998764
No 442
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=91.49 E-value=0.23 Score=45.83 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
...+|.|||.|.-|...|..|++.|++|+++++..
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34589999999999999999999999999999864
No 443
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=91.49 E-value=0.25 Score=42.17 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
....|.|||+|..|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45689999999999999999999999999999764
No 444
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.47 E-value=0.21 Score=42.33 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
....++|+|+|-+|-++|+.|.+.|. +|+|+.+..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 45689999999999999999999998 899998764
No 445
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.45 E-value=0.22 Score=45.74 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.++|.|||.|.-|...|..|++.|++|+++++..
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999875
No 446
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.45 E-value=0.18 Score=43.00 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=29.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~~ 90 (342)
++|.|||+|-.|.++|+.|..++. +++++|-..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 579999999999999999998875 799999764
No 447
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.43 E-value=0.2 Score=41.80 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=30.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC----CceEEEecCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAG----HKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g----~~v~vle~~~~ 91 (342)
++|.|||+|.-|.+.|..|++.| ++|++++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 57999999999999999999999 79999998754
No 448
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=91.41 E-value=0.25 Score=41.65 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
....++|+|+|-+|.++|+.|++.|. +|+|+.+..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 45689999999999999999999996 899998753
No 449
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.40 E-value=0.2 Score=43.35 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=29.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~ 89 (342)
..+|+|||+|..|.+.|+.|+..++ .|+++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4699999999999999999998885 79999865
No 450
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=91.39 E-value=0.21 Score=45.10 Aligned_cols=32 Identities=31% Similarity=0.553 Sum_probs=29.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---ceEEEe
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH---KPLLLE 87 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~---~v~vle 87 (342)
...+|+|+|+|-+|.++|..|.+.|. +|+|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 45689999999999999999999997 899999
No 451
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=91.36 E-value=0.18 Score=43.39 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=30.6
Q ss_pred CCCCeEEEECCC-HHHHHHHHHHHHcCCceEEEecC
Q 019346 55 SKPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 55 ~~~~dv~IiG~G-~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
-...+++|||+| +.|..+|..|...|.+|++.++.
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 356799999999 67999999999999999988764
No 452
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=91.30 E-value=0.11 Score=46.51 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=28.1
Q ss_pred CeEEEECCCHHHHHHHHHHHH-cCCceEEEe
Q 019346 58 LKVVIAGAGLAGLSTAKYLAD-AGHKPLLLE 87 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~-~g~~v~vle 87 (342)
++|.|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 489999999999999999998 499999999
No 453
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.29 E-value=0.22 Score=43.11 Aligned_cols=34 Identities=29% Similarity=0.344 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcC----CceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAG----HKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g----~~v~vle~~~ 90 (342)
.++|.|||+|.-|.+.|..|++.| ++|++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 458999999999999999999999 8999999865
No 454
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=91.24 E-value=0.22 Score=45.86 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=30.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|.-|...|..|++.|++|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999864
No 455
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.24 E-value=0.22 Score=43.77 Aligned_cols=36 Identities=33% Similarity=0.470 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~ 91 (342)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 35689999999999999999999997 8999998654
No 456
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.23 E-value=0.18 Score=42.79 Aligned_cols=32 Identities=28% Similarity=0.261 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|..|...|..|++ |++|+++++..
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 369999999999999999999 99999999864
No 457
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.22 E-value=0.27 Score=40.69 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=30.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC----ceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGH----KPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~----~v~vle~~~ 90 (342)
++|.|||+|.-|.+.|..|.+.|+ +|++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999864
No 458
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=91.19 E-value=0.26 Score=41.79 Aligned_cols=35 Identities=23% Similarity=0.155 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
....++|+|+|-+|.++|+.|++.|. +|+|+.+..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 45689999999999999999999996 899998753
No 459
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=91.15 E-value=0.22 Score=48.29 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
-.+|.|||+|.-|...|..|++.|++|+++|.+.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 4479999999999999999999999999999864
No 460
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=91.11 E-value=0.19 Score=42.71 Aligned_cols=32 Identities=28% Similarity=0.266 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
...++|+|+|-.|.++|..|++.| +|+++.++
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 458999999999999999999999 99999875
No 461
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.07 E-value=0.2 Score=46.04 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.+.+|.|||.|.-|.+.|..|++.|++|+++++..
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 34589999999999999999999999999999863
No 462
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=91.01 E-value=0.28 Score=47.57 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
-..|.|||||.-|...|+.++..|++|+++|..+
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 3589999999999999999999999999999765
No 463
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=90.96 E-value=0.31 Score=41.98 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~ 89 (342)
....++|+|+|-+|-++|+.|++.|. +|+|+.+.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45689999999999999999999997 79999876
No 464
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=90.92 E-value=0.21 Score=43.11 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=29.5
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcC--CceEEEecCC
Q 019346 58 LKVVIAGA-GLAGLSTAKYLADAG--HKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~-G~~G~~~A~~l~~~g--~~v~vle~~~ 90 (342)
++|+|||| |..|.+.|+.|+..| .+|+++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 47999998 999999999999888 5899998865
No 465
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.87 E-value=0.23 Score=45.67 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=30.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|.-|...|..|++.|++|+++++..
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999863
No 466
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=90.85 E-value=0.23 Score=42.94 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=29.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC--ceEEEecC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~--~v~vle~~ 89 (342)
..+|+|||+|..|.+.|+.|+..++ .++++|..
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 4699999999999999999998876 79999975
No 467
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=90.83 E-value=0.22 Score=41.69 Aligned_cols=30 Identities=20% Similarity=0.156 Sum_probs=28.1
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEec
Q 019346 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (342)
Q Consensus 59 dv~IiG~G~~G~~~A~~l~~~g~~v~vle~ 88 (342)
+|.|||+|.-|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 689999999999999999999999999866
No 468
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=90.73 E-value=0.34 Score=41.44 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=31.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
....|+|.|| |..|...+..|+++|++|+++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3568999999 99999999999999999999988654
No 469
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=90.66 E-value=0.31 Score=42.55 Aligned_cols=33 Identities=30% Similarity=0.259 Sum_probs=30.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
..|.|||.|.-|.+.|..|++.|++|++.++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 479999999999999999999999999999865
No 470
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.65 E-value=0.29 Score=40.96 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=29.6
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 59 dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
+++|||+|-.|.+.|..|.+.|.+|+++++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999998753
No 471
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.63 E-value=0.27 Score=41.16 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc-eEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~-v~vle~~~ 90 (342)
.++|.|||+|..|...|..|++.|++ |+++++..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35899999999999999999999998 88998764
No 472
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.59 E-value=0.35 Score=40.92 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---ceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH---KPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~---~v~vle~~~ 90 (342)
..+|.|||+|.-|.+.|..|++.|+ +|++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3579999999999999999999998 999999875
No 473
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.57 E-value=0.21 Score=42.81 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=28.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..+|-+||-|.-|...|..|++.|++|+++++...
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 34799999999999999999999999999997653
No 474
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.55 E-value=0.26 Score=41.11 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=30.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|..|...|..|.+.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 589999999999999999999999999998764
No 475
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=90.54 E-value=0.27 Score=42.30 Aligned_cols=32 Identities=34% Similarity=0.451 Sum_probs=28.8
Q ss_pred eEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 59 KVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 59 dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
+|+|||+|..|.+.|+.|+..++ .|+++|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999998888 699999864
No 476
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=90.53 E-value=0.31 Score=45.67 Aligned_cols=41 Identities=27% Similarity=0.272 Sum_probs=34.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCCCCcce
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~~gG~~ 96 (342)
...+|+|||+|-.|..+|..|++.|. +++|+|....--.+.
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL 366 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNP 366 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGG
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCc
Confidence 56799999999999999999999996 899999876543333
No 477
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=90.52 E-value=0.26 Score=39.72 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=30.5
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 58 LKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG-~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
++|+|.| +|..|...+..|+++|++|+++.+...
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE 35 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence 3699999 799999999999999999999998753
No 478
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=90.52 E-value=0.24 Score=44.52 Aligned_cols=38 Identities=21% Similarity=0.429 Sum_probs=33.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC---ceEEEecCCCC
Q 019346 55 SKPLKVVIAGAGLAGLSTAKYLADAGH---KPLLLEARDVL 92 (342)
Q Consensus 55 ~~~~dv~IiG~G~~G~~~A~~l~~~g~---~v~vle~~~~~ 92 (342)
-.+.+|||.|+|.+|+.+|..|.+.|. +|.++|+...+
T Consensus 217 l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli 257 (487)
T 3nv9_A 217 IHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSL 257 (487)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEEC
T ss_pred hhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccc
Confidence 356799999999999999999999997 89999998643
No 479
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=90.50 E-value=0.31 Score=44.47 Aligned_cols=35 Identities=29% Similarity=0.318 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
....++|+|+|..|.++|..|+..|.+|++.|..+
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45689999999999999999999999999998764
No 480
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=90.47 E-value=0.5 Score=40.81 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=31.2
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHcCCceEEEecC
Q 019346 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 55 ~~~~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
.....|+|.|| |..|...+..|+++|++|+++.+.
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34568999998 999999999999999999999875
No 481
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=90.46 E-value=0.31 Score=40.64 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=29.2
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHcCCceEEEecCC
Q 019346 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
....++|.|| |-.|.+.|..|+++|++|+++.++.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 63 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV 63 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH
Confidence 3456888875 7889999999999999999998754
No 482
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.38 E-value=0.37 Score=40.91 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=30.2
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCceEEEecC
Q 019346 57 PLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 57 ~~dv~IiG-~G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
...++|+| +|-.|.++|..|++.|.+|+++.+.
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 45899999 9999999999999999999999875
No 483
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=90.36 E-value=0.29 Score=45.83 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~ 91 (342)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 326 ~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~V 362 (598)
T 3vh1_A 326 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 362 (598)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 45799999999999999999999997 8999997654
No 484
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=90.26 E-value=0.19 Score=42.78 Aligned_cols=32 Identities=31% Similarity=0.402 Sum_probs=29.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
++|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 589999999999999999999999999998 54
No 485
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=90.25 E-value=0.31 Score=41.03 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecC
Q 019346 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~ 89 (342)
...++|||+|-+|-++|+.|.+.|. +|+|+.+.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4589999999999999999999996 89999875
No 486
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=90.13 E-value=0.37 Score=42.48 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=30.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
....|+|+|+|-.|..+|..|.+.|.+|++.|..
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4568999999999999999999999999998853
No 487
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.09 E-value=0.21 Score=46.09 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHH-HHHHHHHcCCceEEEecCC
Q 019346 57 PLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 57 ~~dv~IiG~G~~G~~-~A~~l~~~g~~v~vle~~~ 90 (342)
..+|.|||.|-+|++ +|..|.+.|++|++.|.+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 458999999999997 6999999999999999764
No 488
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=90.08 E-value=0.35 Score=42.33 Aligned_cols=36 Identities=28% Similarity=0.321 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~ 91 (342)
...+|+|||+|-.|..+|..|++.|. +++|+|-...
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 45699999999999999999999997 8999987643
No 489
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=90.04 E-value=0.23 Score=43.11 Aligned_cols=35 Identities=26% Similarity=0.223 Sum_probs=29.8
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcC--CceEEEecCC
Q 019346 56 KPLKVVIAG-AGLAGLSTAKYLADAG--HKPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG-~G~~G~~~A~~l~~~g--~~v~vle~~~ 90 (342)
..++|+||| +|..|.+.|..|+..| .+|+++|...
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 346899999 7999999999999988 6899999654
No 490
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.88 E-value=0.27 Score=39.85 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=30.9
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
+.|+|.|| |..|...+..|+++|++|+++.+...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 58999995 99999999999999999999998743
No 491
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=89.84 E-value=0.39 Score=43.38 Aligned_cols=36 Identities=28% Similarity=0.379 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~~ 91 (342)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTI 75 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBC
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEe
Confidence 45689999999999999999999997 8999987543
No 492
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=89.65 E-value=0.41 Score=40.68 Aligned_cols=35 Identities=11% Similarity=0.105 Sum_probs=30.8
Q ss_pred CCCCeEEEECCC-HHHHHHHHHHHHcCCceEEEecC
Q 019346 55 SKPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 55 ~~~~dv~IiG~G-~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
-...+++|||+| +.|..+|..|.+.|.+|+++.+.
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 456799999999 68999999999999999999744
No 493
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=89.63 E-value=0.43 Score=40.76 Aligned_cols=34 Identities=18% Similarity=0.458 Sum_probs=30.4
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
+.|+|.|| |..|...+..|+++|++|+++.+...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 35 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSS 35 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 36899999 99999999999999999999987543
No 494
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=89.59 E-value=0.36 Score=43.26 Aligned_cols=35 Identities=31% Similarity=0.388 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 019346 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (342)
Q Consensus 56 ~~~dv~IiG~G~~G~~~A~~l~~~g~-~v~vle~~~ 90 (342)
....|+|||+|..|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 35589999999999999999999998 899998764
No 495
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=89.42 E-value=0.49 Score=40.95 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=31.1
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 57 ~~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
.+.|+|.|| |..|...+..|+++|++|+++.+...
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 48 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSS 48 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChH
Confidence 358999996 99999999999999999999998643
No 496
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=89.38 E-value=0.44 Score=40.50 Aligned_cols=35 Identities=14% Similarity=0.242 Sum_probs=30.4
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHcCCceEEEecC
Q 019346 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (342)
Q Consensus 55 ~~~~dv~IiG~-G~~G~~~A~~l~~~g~~v~vle~~ 89 (342)
-...+++|||. |+.|..+|..|.+.|..|++..++
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 35679999995 568999999999999999999864
No 497
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.35 E-value=0.63 Score=37.47 Aligned_cols=32 Identities=19% Similarity=0.103 Sum_probs=28.9
Q ss_pred eEEEECC-CHHHHHHHHHHH-HcCCceEEEecCC
Q 019346 59 KVVIAGA-GLAGLSTAKYLA-DAGHKPLLLEARD 90 (342)
Q Consensus 59 dv~IiG~-G~~G~~~A~~l~-~~g~~v~vle~~~ 90 (342)
.|+|.|| |..|...|..|+ +.|++|+++.++.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 4999995 999999999999 8999999998864
No 498
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=89.32 E-value=0.61 Score=41.40 Aligned_cols=39 Identities=15% Similarity=0.174 Sum_probs=33.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 019346 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (342)
Q Consensus 54 ~~~~~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~~ 92 (342)
.+....|+|||+|..|...+..+.+.|++|++++..+..
T Consensus 8 ~~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~~ 46 (391)
T 1kjq_A 8 RPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADA 46 (391)
T ss_dssp STTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCC
Confidence 345679999999999999999999999999999876543
No 499
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=89.24 E-value=0.45 Score=44.73 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=32.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~~ 91 (342)
..++|||+|-.|...|..|.+.|++|+++|+++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 6899999999999999999999999999999865
No 500
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=89.17 E-value=0.39 Score=44.03 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=30.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 019346 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (342)
Q Consensus 58 ~dv~IiG~G~~G~~~A~~l~~~g~~v~vle~~~ 90 (342)
.+|.|||.|.-|...|..|++.|++|+++++..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 589999999999999999999999999999863
Done!